Index Sample Index Original Filename Sample Name Sample ID Sample Comment Sample Type Acquisition Date & Time Rack Number Plate Number Vial Number Dilution Factor Injection Volume Operator Name Acq. Method Name IS Component Name Component Index Component Comment IS Comment Mass Info IS Mass Info IS Name Component Group Name Conc. Units Failed Query IS Failed Query Peak Comment IS Peak Comment Actual Concentration IS Actual Concentration Concentration Ratio Expected RT IS Expected RT Integration Type IS Integration Type Area IS Area Corrected Area IS Corrected Area Area Ratio Height IS Height Corrected Height IS Corrected Height Height Ratio Area / Height IS Area / Height Corrected Area/Height IS Corrected Area/Height Region Height IS Region Height Quality IS Quality Retention Time IS Retention Time Start Time IS Start Time End Time IS End Time Total Width IS Total Width Width at 50% IS Width at 50% Signal / Noise IS Signal / Noise Baseline Delta / Height IS Baseline Delta / Height Modified Relative RT Used Calculated Concentration Accuracy SF Peak Width Confidence SF Model Source SF Candidate Model Quality SF Asymmetry SF Saturated SF Integration Quality SF Group Confidence SF Num Peaks Score_IMPAQT MSSimScore_IMPAQT HeightScore_IMPAQT RTminScore_IMPAQT RankScore_IMPAQT MSSim_IMPAQT MSSimSita_IMPAQT RTminDiff_IMPAQT RankSum_IMPAQT CosSimilarity_IMPAQT CosSimilaritySita_IMPAQT Height_IMPAQT InterfereTrans_IMPAQT InterfereTransAll_IMPAQT LScore_IMPAQT LRTminScore_IMPAQT LSNScore_IMPAQT LSNAllScore_IMPAQT HLSimScore_IMPAQT HLSim_IMPAQT HLSimSita_IMPAQT BaseLine_IMPAQT BaseLineUnitNum_IMPAQT BaseLineMaxCount_IMPAQT Symbol Description 1 1 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1593.[MT7]-ALEEK[MT7].2b3_1.heavy 439.265 / 458.273 15214.0 18.068899154663086 46 16 10 10 10 3.4456862810585625 29.021794743681255 0.0 3 0.9621294521982755 6.321663559624748 15214.0 17.147982333945727 0.0 - - - - - - - 681.0 30 7 CNGA3;SPTY2D1;EGFR;C22orf33;IFIT3;PDE6B;SPECC1 cyclic nucleotide gated channel alpha 3;SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae);epidermal growth factor receptor;chromosome 22 open reading frame 33;interferon-induced protein with tetratricopeptide repeats 3;phosphodiesterase 6B, cGMP-specific, rod, beta;sperm antigen with calponin homology and coiled-coil domains 1 3 1 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1593.[MT7]-ALEEK[MT7].2y4_1.heavy 439.265 / 662.384 47843.0 18.068899154663086 46 16 10 10 10 3.4456862810585625 29.021794743681255 0.0 3 0.9621294521982755 6.321663559624748 47843.0 37.166364312232446 0.0 - - - - - - - 321.0 95 4 CNGA3;SPTY2D1;EGFR;C22orf33;IFIT3;PDE6B;SPECC1 cyclic nucleotide gated channel alpha 3;SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae);epidermal growth factor receptor;chromosome 22 open reading frame 33;interferon-induced protein with tetratricopeptide repeats 3;phosphodiesterase 6B, cGMP-specific, rod, beta;sperm antigen with calponin homology and coiled-coil domains 1 5 1 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1593.[MT7]-ALEEK[MT7].2b4_1.heavy 439.265 / 587.316 13015.0 18.068899154663086 46 16 10 10 10 3.4456862810585625 29.021794743681255 0.0 3 0.9621294521982755 6.321663559624748 13015.0 17.034205412907703 1.0 - - - - - - - 275.0 31 2 CNGA3;SPTY2D1;EGFR;C22orf33;IFIT3;PDE6B;SPECC1 cyclic nucleotide gated channel alpha 3;SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae);epidermal growth factor receptor;chromosome 22 open reading frame 33;interferon-induced protein with tetratricopeptide repeats 3;phosphodiesterase 6B, cGMP-specific, rod, beta;sperm antigen with calponin homology and coiled-coil domains 1 7 1 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1593.[MT7]-ALEEK[MT7].2y3_1.heavy 439.265 / 549.3 26396.0 18.068899154663086 46 16 10 10 10 3.4456862810585625 29.021794743681255 0.0 3 0.9621294521982755 6.321663559624748 26396.0 75.67437759492417 0.0 - - - - - - - 213.66666666666666 52 6 CNGA3;SPTY2D1;EGFR;C22orf33;IFIT3;PDE6B;SPECC1 cyclic nucleotide gated channel alpha 3;SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae);epidermal growth factor receptor;chromosome 22 open reading frame 33;interferon-induced protein with tetratricopeptide repeats 3;phosphodiesterase 6B, cGMP-specific, rod, beta;sperm antigen with calponin homology and coiled-coil domains 1 9 2 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1592.[MT7]-SSDPATR.2y4_1.heavy 439.228 / 444.257 N/A N/A - - - - - - - - - 0.0 - - - - - - - DNA2 DNA replication helicase 2 homolog (yeast) 11 2 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1592.[MT7]-SSDPATR.2b4_1.heavy 439.228 / 531.253 N/A N/A - - - - - - - - - 0.0 - - - - - - - DNA2 DNA replication helicase 2 homolog (yeast) 13 2 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1592.[MT7]-SSDPATR.2y6_1.heavy 439.228 / 646.315 N/A N/A - - - - - - - - - 0.0 - - - - - - - DNA2 DNA replication helicase 2 homolog (yeast) 15 2 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1592.[MT7]-SSDPATR.2b5_1.heavy 439.228 / 602.29 N/A N/A - - - - - - - - - 0.0 - - - - - - - DNA2 DNA replication helicase 2 homolog (yeast) 17 3 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2331.[MT7]-FLNLWLK[MT7].2b3_1.heavy 611.384 / 519.305 36105.0 42.5008487701416 41 15 10 6 10 1.8127808283005442 38.51437960807523 0.037899017333984375 3 0.9593761562293338 6.102257967364741 36105.0 75.99087310792785 0.0 - - - - - - - 193.5 72 8 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 19 3 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2331.[MT7]-FLNLWLK[MT7].2b4_1.heavy 611.384 / 632.389 50375.0 42.5008487701416 41 15 10 6 10 1.8127808283005442 38.51437960807523 0.037899017333984375 3 0.9593761562293338 6.102257967364741 50375.0 187.44186046511626 0.0 - - - - - - - 301.0 100 4 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 21 3 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2331.[MT7]-FLNLWLK[MT7].2y3_1.heavy 611.384 / 590.378 41779.0 42.5008487701416 41 15 10 6 10 1.8127808283005442 38.51437960807523 0.037899017333984375 3 0.9593761562293338 6.102257967364741 41779.0 85.95549425107953 0.0 - - - - - - - 258.0 83 8 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 23 3 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2331.[MT7]-FLNLWLK[MT7].2y6_1.heavy 611.384 / 930.589 29915.0 42.5008487701416 41 15 10 6 10 1.8127808283005442 38.51437960807523 0.037899017333984375 3 0.9593761562293338 6.102257967364741 29915.0 89.22322674418605 0.0 - - - - - - - 215.0 59 4 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 25 4 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1591.[MT7]-VESELR.2y4_1.heavy 438.749 / 504.278 26865.0 20.88990020751953 45 15 10 10 10 2.6043798190784644 30.383888795792863 0.0 3 0.9593803966386216 6.102578665209699 26865.0 62.913039077627175 0.0 - - - - - - - 305.6 53 10 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 27 4 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1591.[MT7]-VESELR.2y5_1.heavy 438.749 / 633.32 83435.0 20.88990020751953 45 15 10 10 10 2.6043798190784644 30.383888795792863 0.0 3 0.9593803966386216 6.102578665209699 83435.0 134.092745390854 0.0 - - - - - - - 686.2857142857143 166 7 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 29 4 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1591.[MT7]-VESELR.2b4_1.heavy 438.749 / 589.295 110081.0 20.88990020751953 45 15 10 10 10 2.6043798190784644 30.383888795792863 0.0 3 0.9593803966386216 6.102578665209699 110081.0 156.8384760004038 0.0 - - - - - - - 728.0 220 9 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 31 4 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1591.[MT7]-VESELR.2b5_1.heavy 438.749 / 702.379 15508.0 20.88990020751953 45 15 10 10 10 2.6043798190784644 30.383888795792863 0.0 3 0.9593803966386216 6.102578665209699 15508.0 88.17697401778835 0.0 - - - - - - - 291.0 31 9 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 33 5 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1590.[MT7]-LSTALAR.2y5_1.heavy 438.275 / 531.325 4778.0 24.5447998046875 30 14 2 10 4 2.5049641548045702 39.92073092471126 0.0 7 0.9443834969473441 5.208670179045795 4778.0 1.3047501573303957 2.0 - - - - - - - 0.0 12 0 MCM7 minichromosome maintenance complex component 7 35 5 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1590.[MT7]-LSTALAR.2b4_1.heavy 438.275 / 517.31 12086.0 24.5447998046875 30 14 2 10 4 2.5049641548045702 39.92073092471126 0.0 7 0.9443834969473441 5.208670179045795 12086.0 32.11463819691578 0.0 - - - - - - - 0.0 24 0 MCM7 minichromosome maintenance complex component 7 37 5 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1590.[MT7]-LSTALAR.2y6_1.heavy 438.275 / 618.357 47220.0 24.5447998046875 30 14 2 10 4 2.5049641548045702 39.92073092471126 0.0 7 0.9443834969473441 5.208670179045795 47220.0 28.09943600795802 2.0 - - - - - - - 0.0 227 0 MCM7 minichromosome maintenance complex component 7 39 5 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1590.[MT7]-LSTALAR.2y1_1.heavy 438.275 / 175.119 14616.0 24.5447998046875 30 14 2 10 4 2.5049641548045702 39.92073092471126 0.0 7 0.9443834969473441 5.208670179045795 14616.0 11.178088039128502 3.0 - - - - - - - 0.0 51 0 MCM7 minichromosome maintenance complex component 7 41 6 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2338.[MT7]-WNEEILFR.2b3_1.heavy 625.836 / 574.274 8906.0 37.12447547912598 42 16 10 6 10 3.609269820067764 27.70643509221555 0.03890228271484375 3 0.961908919224924 6.303219493696614 8906.0 14.244122821400113 0.0 - - - - - - - 301.0 17 4 NEDD4 neural precursor cell expressed, developmentally down-regulated 4 43 6 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2338.[MT7]-WNEEILFR.2y5_1.heavy 625.836 / 677.398 11554.0 37.12447547912598 42 16 10 6 10 3.609269820067764 27.70643509221555 0.03890228271484375 3 0.961908919224924 6.303219493696614 11554.0 31.20255725027688 0.0 - - - - - - - 441.0 23 6 NEDD4 neural precursor cell expressed, developmentally down-regulated 4 45 6 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2338.[MT7]-WNEEILFR.2b4_1.heavy 625.836 / 703.317 17090.0 37.12447547912598 42 16 10 6 10 3.609269820067764 27.70643509221555 0.03890228271484375 3 0.961908919224924 6.303219493696614 17090.0 48.30470835261533 0.0 - - - - - - - 361.0 34 6 NEDD4 neural precursor cell expressed, developmentally down-regulated 4 47 6 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2338.[MT7]-WNEEILFR.2y7_1.heavy 625.836 / 920.484 34180.0 37.12447547912598 42 16 10 6 10 3.609269820067764 27.70643509221555 0.03890228271484375 3 0.961908919224924 6.303219493696614 34180.0 87.21712394430496 0.0 - - - - - - - 309.57142857142856 68 7 NEDD4 neural precursor cell expressed, developmentally down-regulated 4 49 7 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1978.[MT7]-VLVSGLQGLGAEVAK[MT7].3b6_1.heavy 577.02 / 713.468 53119.0 35.958499908447266 45 15 10 10 10 2.125587229569535 37.24663839152945 0.0 3 0.9515811821731669 5.5858230965044475 53119.0 80.72594471291946 0.0 - - - - - - - 254.0 106 1 UBA7 ubiquitin-like modifier activating enzyme 7 51 7 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1978.[MT7]-VLVSGLQGLGAEVAK[MT7].3y6_1.heavy 577.02 / 718.422 133941.0 35.958499908447266 45 15 10 10 10 2.125587229569535 37.24663839152945 0.0 3 0.9515811821731669 5.5858230965044475 133941.0 282.4770059486662 0.0 - - - - - - - 254.0 267 2 UBA7 ubiquitin-like modifier activating enzyme 7 53 7 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1978.[MT7]-VLVSGLQGLGAEVAK[MT7].3b5_1.heavy 577.02 / 600.384 78535.0 35.958499908447266 45 15 10 10 10 2.125587229569535 37.24663839152945 0.0 3 0.9515811821731669 5.5858230965044475 78535.0 136.31601226912403 0.0 - - - - - - - 254.0 157 3 UBA7 ubiquitin-like modifier activating enzyme 7 55 7 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1978.[MT7]-VLVSGLQGLGAEVAK[MT7].3b8_1.heavy 577.02 / 898.548 57948.0 35.958499908447266 45 15 10 10 10 2.125587229569535 37.24663839152945 0.0 3 0.9515811821731669 5.5858230965044475 57948.0 22.59882261832188 1.0 - - - - - - - 254.0 117 1 UBA7 ubiquitin-like modifier activating enzyme 7 57 8 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1977.[MT7]-GLEPC[CAM]AISIEVLGAR.2b3_1.heavy 864.975 / 444.258 29141.0 38.443599700927734 43 13 10 10 10 3.208650181217286 31.165753308159744 0.0 3 0.9232056348605764 4.42464500905257 29141.0 60.802909466615006 0.0 - - - - - - - 333.5 58 6 PLCG1 phospholipase C, gamma 1 59 8 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1977.[MT7]-GLEPC[CAM]AISIEVLGAR.2y8_1.heavy 864.975 / 844.489 3337.0 38.443599700927734 43 13 10 10 10 3.208650181217286 31.165753308159744 0.0 3 0.9232056348605764 4.42464500905257 3337.0 1.2997752808988765 2.0 - - - - - - - 370.6666666666667 6 6 PLCG1 phospholipase C, gamma 1 61 8 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1977.[MT7]-GLEPC[CAM]AISIEVLGAR.2y9_1.heavy 864.975 / 957.573 2224.0 38.443599700927734 43 13 10 10 10 3.208650181217286 31.165753308159744 0.0 3 0.9232056348605764 4.42464500905257 2224.0 9.716351857475455 0.0 - - - - - - - 317.57142857142856 4 7 PLCG1 phospholipase C, gamma 1 63 8 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1977.[MT7]-GLEPC[CAM]AISIEVLGAR.2y11_1.heavy 864.975 / 1188.64 1335.0 38.443599700927734 43 13 10 10 10 3.208650181217286 31.165753308159744 0.0 3 0.9232056348605764 4.42464500905257 1335.0 0.12851637764932558 2.0 - - - - - - - 296.3333333333333 3 6 PLCG1 phospholipase C, gamma 1 65 9 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1975.[MT7]-VLEDGTPFWSGPK[MT7].3b6_1.heavy 574.31 / 759.401 16538.0 35.17390060424805 40 10 10 10 10 0.818537593926804 75.59446398778324 0.0 3 0.8373240815885654 3.017375742918718 16538.0 78.09795110708238 0.0 - - - - - - - 267.0 33 5 UBA7 ubiquitin-like modifier activating enzyme 7 67 9 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1975.[MT7]-VLEDGTPFWSGPK[MT7].3b4_1.heavy 574.31 / 601.331 3468.0 35.17390060424805 40 10 10 10 10 0.818537593926804 75.59446398778324 0.0 3 0.8373240815885654 3.017375742918718 3468.0 7.607505882777755 3.0 - - - - - - - 267.0 7 8 UBA7 ubiquitin-like modifier activating enzyme 7 69 9 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1975.[MT7]-VLEDGTPFWSGPK[MT7].3b5_1.heavy 574.31 / 658.353 3201.0 35.17390060424805 40 10 10 10 10 0.818537593926804 75.59446398778324 0.0 3 0.8373240815885654 3.017375742918718 3201.0 5.16075 0.0 - - - - - - - 267.0 6 3 UBA7 ubiquitin-like modifier activating enzyme 7 71 9 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1975.[MT7]-VLEDGTPFWSGPK[MT7].3y5_1.heavy 574.31 / 718.4 7469.0 35.17390060424805 40 10 10 10 10 0.818537593926804 75.59446398778324 0.0 3 0.8373240815885654 3.017375742918718 7469.0 40.0282263493335 0.0 - - - - - - - 267.0 14 7 UBA7 ubiquitin-like modifier activating enzyme 7 73 10 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1974.[MT7]-VQPGDRVNVTGIYR.3y7_1.heavy 573.32 / 822.447 5371.0 25.75029945373535 42 12 10 10 10 2.2498477908744574 44.447451247860904 0.0 3 0.890050488001181 3.6872601439938157 5371.0 25.84966965700988 0.0 - - - - - - - 298.0 10 3 MCM4 minichromosome maintenance complex component 4 75 10 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1974.[MT7]-VQPGDRVNVTGIYR.3y12_2.heavy 573.32 / 673.862 53108.0 25.75029945373535 42 12 10 10 10 2.2498477908744574 44.447451247860904 0.0 3 0.890050488001181 3.6872601439938157 53108.0 231.41142470742977 0.0 - - - - - - - 298.0 106 10 MCM4 minichromosome maintenance complex component 4 77 10 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1974.[MT7]-VQPGDRVNVTGIYR.3y5_1.heavy 573.32 / 609.336 8056.0 25.75029945373535 42 12 10 10 10 2.2498477908744574 44.447451247860904 0.0 3 0.890050488001181 3.6872601439938157 8056.0 19.75044159344207 0.0 - - - - - - - 298.0 16 7 MCM4 minichromosome maintenance complex component 4 79 10 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1974.[MT7]-VQPGDRVNVTGIYR.3y13_2.heavy 573.32 / 737.892 24466.0 25.75029945373535 42 12 10 10 10 2.2498477908744574 44.447451247860904 0.0 3 0.890050488001181 3.6872601439938157 24466.0 25.77425341131647 1.0 - - - - - - - 298.0 50 1 MCM4 minichromosome maintenance complex component 4 81 11 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2478.[MT7]-LLNDEDQVVVNK[MT7].2b4_1.heavy 837.469 / 600.347 6000.0 28.364299774169922 45 15 10 10 10 5.413320243123228 18.472951074164563 0.0 3 0.951277817302418 5.568262768656889 6000.0 14.39568215892054 0.0 - - - - - - - 333.0 12 1 CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 83 11 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2478.[MT7]-LLNDEDQVVVNK[MT7].2b6_1.heavy 837.469 / 844.417 5000.0 28.364299774169922 45 15 10 10 10 5.413320243123228 18.472951074164563 0.0 3 0.951277817302418 5.568262768656889 5000.0 5.231433420574033 0.0 - - - - - - - 333.0 10 3 CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 85 11 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2478.[MT7]-LLNDEDQVVVNK[MT7].2y3_1.heavy 837.469 / 504.326 8667.0 28.364299774169922 45 15 10 10 10 5.413320243123228 18.472951074164563 0.0 3 0.951277817302418 5.568262768656889 8667.0 25.33830584707646 0.0 - - - - - - - 333.0 17 2 CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 87 11 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2478.[MT7]-LLNDEDQVVVNK[MT7].2b7_1.heavy 837.469 / 972.476 2333.0 28.364299774169922 45 15 10 10 10 5.413320243123228 18.472951074164563 0.0 3 0.951277817302418 5.568262768656889 2333.0 1.0846149555240807 3.0 - - - - - - - 333.0 5 4 CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 89 12 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1973.[MT7]-SLAAQEPASVLEEAR.3y7_1.heavy 572.308 / 803.426 3667.0 30.36829948425293 31 13 2 10 6 1.4986526833874105 45.17318137999823 0.0 5 0.9041368494569028 3.9537069844814288 3667.0 4.400557179597085 2.0 - - - - - - - 333.0 38 6 ORC1 origin recognition complex, subunit 1 91 12 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1973.[MT7]-SLAAQEPASVLEEAR.3b6_1.heavy 572.308 / 744.401 6000.0 30.36829948425293 31 13 2 10 6 1.4986526833874105 45.17318137999823 0.0 5 0.9041368494569028 3.9537069844814288 6000.0 9.8958081715218 0.0 - - - - - - - 333.0 12 6 ORC1 origin recognition complex, subunit 1 93 12 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1973.[MT7]-SLAAQEPASVLEEAR.3b5_1.heavy 572.308 / 615.358 2000.0 30.36829948425293 31 13 2 10 6 1.4986526833874105 45.17318137999823 0.0 5 0.9041368494569028 3.9537069844814288 2000.0 -0.32143431706698894 8.0 - - - - - - - 333.0 8 1 ORC1 origin recognition complex, subunit 1 95 12 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1973.[MT7]-SLAAQEPASVLEEAR.3y5_1.heavy 572.308 / 617.325 4333.0 30.36829948425293 31 13 2 10 6 1.4986526833874105 45.17318137999823 0.0 5 0.9041368494569028 3.9537069844814288 4333.0 4.726833896918462 3.0 - - - - - - - 333.0 18 6 ORC1 origin recognition complex, subunit 1 97 13 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1972.[MT7]-APTADEIHVTVGEAR.3y7_1.heavy 570.636 / 731.405 73791.0 25.572399139404297 45 15 10 10 10 1.8506975598392144 37.03482392853192 0.0 3 0.9568463769607839 5.919424030038398 73791.0 72.6806518514105 0.0 - - - - - - - 716.4285714285714 147 7 PRKCG protein kinase C, gamma 99 13 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1972.[MT7]-APTADEIHVTVGEAR.3y6_1.heavy 570.636 / 632.336 91796.0 25.572399139404297 45 15 10 10 10 1.8506975598392144 37.03482392853192 0.0 3 0.9568463769607839 5.919424030038398 91796.0 55.348606611748 0.0 - - - - - - - 758.5714285714286 183 7 PRKCG protein kinase C, gamma 101 13 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1972.[MT7]-APTADEIHVTVGEAR.3b6_1.heavy 570.636 / 729.354 54310.0 25.572399139404297 45 15 10 10 10 1.8506975598392144 37.03482392853192 0.0 3 0.9568463769607839 5.919424030038398 54310.0 104.44068887326166 0.0 - - - - - - - 295.0 108 8 PRKCG protein kinase C, gamma 103 13 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1972.[MT7]-APTADEIHVTVGEAR.3b5_1.heavy 570.636 / 600.311 34534.0 25.572399139404297 45 15 10 10 10 1.8506975598392144 37.03482392853192 0.0 3 0.9568463769607839 5.919424030038398 34534.0 59.29280814401278 0.0 - - - - - - - 295.0 69 3 PRKCG protein kinase C, gamma 105 14 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1692.[MT7]-AFLGELK[MT7].2y4_1.heavy 533.331 / 590.363 41002.0 31.919700622558594 47 17 10 10 10 1.8641094824666786 41.82814362001234 0.0 3 0.9724932566352149 7.424072786772887 41002.0 76.16470588235295 0.0 - - - - - - - 323.0 82 4 PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 107 14 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1692.[MT7]-AFLGELK[MT7].2y5_1.heavy 533.331 / 703.447 23891.0 31.919700622558594 47 17 10 10 10 1.8641094824666786 41.82814362001234 0.0 3 0.9724932566352149 7.424072786772887 23891.0 86.78670794633642 0.0 - - - - - - - 323.0 47 5 PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 109 14 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1692.[MT7]-AFLGELK[MT7].2b6_1.heavy 533.331 / 775.447 4520.0 31.919700622558594 47 17 10 10 10 1.8641094824666786 41.82814362001234 0.0 3 0.9724932566352149 7.424072786772887 4520.0 4.851427606338571 0.0 - - - - - - - 323.0 9 4 PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 111 14 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1692.[MT7]-AFLGELK[MT7].2y6_1.heavy 533.331 / 850.516 13237.0 31.919700622558594 47 17 10 10 10 1.8641094824666786 41.82814362001234 0.0 3 0.9724932566352149 7.424072786772887 13237.0 12.983898402087119 1.0 - - - - - - - 323.0 40 2 PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 113 15 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1970.[MT7]-TPFQQIINQISK[MT7].3y6_1.heavy 569.001 / 846.516 8417.0 41.47092342376709 39 13 10 6 10 2.1693257097248435 35.41118810439946 0.038700103759765625 3 0.9131050897493201 4.155937752541392 8417.0 23.31045298567226 0.0 - - - - - - - 300.5 16 4 TTK TTK protein kinase 115 15 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1970.[MT7]-TPFQQIINQISK[MT7].3b4_1.heavy 569.001 / 618.337 401.0 41.47092342376709 39 13 10 6 10 2.1693257097248435 35.41118810439946 0.038700103759765625 3 0.9131050897493201 4.155937752541392 401.0 0.0 32.0 - - - - - - - 334.0 4 6 TTK TTK protein kinase 117 15 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1970.[MT7]-TPFQQIINQISK[MT7].3b5_1.heavy 569.001 / 746.395 35270.0 41.47092342376709 39 13 10 6 10 2.1693257097248435 35.41118810439946 0.038700103759765625 3 0.9131050897493201 4.155937752541392 35270.0 112.01983580980992 0.0 - - - - - - - 343.57142857142856 70 7 TTK TTK protein kinase 119 15 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1970.[MT7]-TPFQQIINQISK[MT7].3y4_1.heavy 569.001 / 619.39 39478.0 41.47092342376709 39 13 10 6 10 2.1693257097248435 35.41118810439946 0.038700103759765625 3 0.9131050897493201 4.155937752541392 39478.0 200.23083974591648 0.0 - - - - - - - 300.5 78 6 TTK TTK protein kinase 121 16 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2282.[MT7]-ETALQQK[MT7].2y4_1.heavy 553.326 / 660.416 22482.0 18.309999465942383 48 18 10 10 10 8.747856858965143 11.43137131896667 0.0 3 0.983865945406664 9.702976128099817 22482.0 72.71276223776223 0.0 - - - - - - - 680.7142857142857 44 7 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 123 16 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2282.[MT7]-ETALQQK[MT7].2b4_1.heavy 553.326 / 559.321 18100.0 18.309999465942383 48 18 10 10 10 8.747856858965143 11.43137131896667 0.0 3 0.983865945406664 9.702976128099817 18100.0 61.733614154874 0.0 - - - - - - - 229.0 36 10 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 125 16 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2282.[MT7]-ETALQQK[MT7].2y3_1.heavy 553.326 / 547.332 20386.0 18.309999465942383 48 18 10 10 10 8.747856858965143 11.43137131896667 0.0 3 0.983865945406664 9.702976128099817 20386.0 33.61720355981505 0.0 - - - - - - - 857.625 40 8 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 127 16 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2282.[MT7]-ETALQQK[MT7].2y6_1.heavy 553.326 / 832.501 44773.0 18.309999465942383 48 18 10 10 10 8.747856858965143 11.43137131896667 0.0 3 0.983865945406664 9.702976128099817 44773.0 246.89475310219728 0.0 - - - - - - - 299.57142857142856 89 7 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 129 17 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1691.[MT7]-GGGYSVLIR.2y8_1.heavy 533.312 / 864.494 7333.0 28.7106990814209 48 18 10 10 10 3.0903901166462058 25.856069455684207 0.0 3 0.9833135499908191 9.54057687192399 7333.0 18.25004497751124 0.0 - - - - - - - 333.0 14 4 TRIM32 tripartite motif-containing 32 131 17 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1691.[MT7]-GGGYSVLIR.2b6_1.heavy 533.312 / 665.338 6667.0 28.7106990814209 48 18 10 10 10 3.0903901166462058 25.856069455684207 0.0 3 0.9833135499908191 9.54057687192399 6667.0 39.2412012012012 0.0 - - - - - - - 333.0 13 3 TRIM32 tripartite motif-containing 32 133 17 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1691.[MT7]-GGGYSVLIR.2b7_1.heavy 533.312 / 778.422 7000.0 28.7106990814209 48 18 10 10 10 3.0903901166462058 25.856069455684207 0.0 3 0.9833135499908191 9.54057687192399 7000.0 19.73013493253373 0.0 - - - - - - - 333.0 14 6 TRIM32 tripartite motif-containing 32 135 17 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1691.[MT7]-GGGYSVLIR.2b5_1.heavy 533.312 / 566.269 10667.0 28.7106990814209 48 18 10 10 10 3.0903901166462058 25.856069455684207 0.0 3 0.9833135499908191 9.54057687192399 10667.0 18.94261685381056 0.0 - - - - - - - 333.0 21 5 TRIM32 tripartite motif-containing 32 137 18 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1690.[MT7]-VQVVGTYR.2y5_1.heavy 533.312 / 595.32 14754.0 23.7278995513916 50 20 10 10 10 8.75206061016696 11.42588065304684 0.0 3 0.9958593438785174 19.172459032675068 14754.0 35.776259197952456 0.0 - - - - - - - 612.8571428571429 29 7 MCM3 minichromosome maintenance complex component 3 139 18 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1690.[MT7]-VQVVGTYR.2y6_1.heavy 533.312 / 694.388 10730.0 23.7278995513916 50 20 10 10 10 8.75206061016696 11.42588065304684 0.0 3 0.9958593438785174 19.172459032675068 10730.0 9.77454791920835 1.0 - - - - - - - 268.0 29 5 MCM3 minichromosome maintenance complex component 3 141 18 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1690.[MT7]-VQVVGTYR.2b5_1.heavy 533.312 / 627.395 2951.0 23.7278995513916 50 20 10 10 10 8.75206061016696 11.42588065304684 0.0 3 0.9958593438785174 19.172459032675068 2951.0 9.689850746268657 6.0 - - - - - - - 268.0 17 10 MCM3 minichromosome maintenance complex component 3 143 18 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1690.[MT7]-VQVVGTYR.2y7_1.heavy 533.312 / 822.447 35677.0 23.7278995513916 50 20 10 10 10 8.75206061016696 11.42588065304684 0.0 3 0.9958593438785174 19.172459032675068 35677.0 78.78983538682428 0.0 - - - - - - - 268.0 71 4 MCM3 minichromosome maintenance complex component 3 145 19 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1684.[MT7]-DLLLQVGR.2y5_1.heavy 529.328 / 572.352 49207.0 33.04240036010742 42 14 10 10 8 1.565144956544258 45.24289305810551 0.0 4 0.9396602415980658 4.998644490129747 49207.0 181.20532726067526 0.0 - - - - - - - 742.1428571428571 98 7 WEE1 WEE1 homolog (S. pombe) 147 19 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1684.[MT7]-DLLLQVGR.2b4_1.heavy 529.328 / 599.388 12837.0 33.04240036010742 42 14 10 10 8 1.565144956544258 45.24289305810551 0.0 4 0.9396602415980658 4.998644490129747 12837.0 8.074046329198625 0.0 - - - - - - - 306.0 25 4 WEE1 WEE1 homolog (S. pombe) 149 19 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1684.[MT7]-DLLLQVGR.2y6_1.heavy 529.328 / 685.435 29646.0 33.04240036010742 42 14 10 10 8 1.565144956544258 45.24289305810551 0.0 4 0.9396602415980658 4.998644490129747 29646.0 59.4859760087241 1.0 - - - - - - - 306.0 62 4 WEE1 WEE1 homolog (S. pombe) 151 19 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1684.[MT7]-DLLLQVGR.2y7_1.heavy 529.328 / 798.52 29035.0 33.04240036010742 42 14 10 10 8 1.565144956544258 45.24289305810551 0.0 4 0.9396602415980658 4.998644490129747 29035.0 134.81212359466426 1.0 - - - - - - - 306.0 58 3 WEE1 WEE1 homolog (S. pombe) 153 20 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1685.[MT7]-LAQATQER.2y4_1.heavy 530.797 / 533.268 4924.0 18.38070011138916 43 20 10 5 8 47.89308897006133 2.087983927336812 0.04640007019042969 4 0.997059134977937 22.751934715033354 4924.0 30.579517248118833 1.0 - - - - - - - 260.25 22 8 SMC3 structural maintenance of chromosomes 3 155 20 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1685.[MT7]-LAQATQER.2y5_1.heavy 530.797 / 604.305 8143.0 18.38070011138916 43 20 10 5 8 47.89308897006133 2.087983927336812 0.04640007019042969 4 0.997059134977937 22.751934715033354 8143.0 14.916770314669918 0.0 - - - - - - - 236.5 16 4 SMC3 structural maintenance of chromosomes 3 157 20 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1685.[MT7]-LAQATQER.2y6_1.heavy 530.797 / 732.364 10605.0 18.38070011138916 43 20 10 5 8 47.89308897006133 2.087983927336812 0.04640007019042969 4 0.997059134977937 22.751934715033354 10605.0 26.32949187861648 1.0 - - - - - - - 252.33333333333334 42 9 SMC3 structural maintenance of chromosomes 3 159 20 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1685.[MT7]-LAQATQER.2y7_1.heavy 530.797 / 803.401 38253.0 18.38070011138916 43 20 10 5 8 47.89308897006133 2.087983927336812 0.04640007019042969 4 0.997059134977937 22.751934715033354 38253.0 60.91104389060608 0.0 - - - - - - - 243.28571428571428 76 7 SMC3 structural maintenance of chromosomes 3 161 21 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2482.[MT7]-SIC[CAM]TTVLELLDK[MT7].2b8_1.heavy 840.478 / 1048.55 4975.0 44.532175064086914 43 17 10 6 10 4.682011670790347 21.358340608988595 0.03929901123046875 3 0.9701959270666253 7.130828194256359 4975.0 21.972464558342423 0.0 - - - - - - - 245.625 9 8 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 163 21 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2482.[MT7]-SIC[CAM]TTVLELLDK[MT7].2y4_1.heavy 840.478 / 632.41 5892.0 44.532175064086914 43 17 10 6 10 4.682011670790347 21.358340608988595 0.03929901123046875 3 0.9701959270666253 7.130828194256359 5892.0 10.441112322791712 0.0 - - - - - - - 222.7 11 10 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 165 21 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2482.[MT7]-SIC[CAM]TTVLELLDK[MT7].2y3_1.heavy 840.478 / 519.326 4975.0 44.532175064086914 43 17 10 6 10 4.682011670790347 21.358340608988595 0.03929901123046875 3 0.9701959270666253 7.130828194256359 4975.0 29.938613231552164 0.0 - - - - - - - 202.45454545454547 9 11 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 167 21 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2482.[MT7]-SIC[CAM]TTVLELLDK[MT7].2y6_1.heavy 840.478 / 874.537 10998.0 44.532175064086914 43 17 10 6 10 4.682011670790347 21.358340608988595 0.03929901123046875 3 0.9701959270666253 7.130828194256359 10998.0 34.631106870229004 0.0 - - - - - - - 245.625 21 8 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 169 22 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1682.[MT7]-TAVDTVFR.2y4_1.heavy 526.797 / 522.304 47474.0 27.93320083618164 50 20 10 10 10 9.317526422142107 10.732462186783895 0.0 3 0.9956701285349496 18.748565303750162 47474.0 29.105967915530584 0.0 - - - - - - - 330.0 94 3 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 171 22 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1682.[MT7]-TAVDTVFR.2y5_1.heavy 526.797 / 637.33 17143.0 27.93320083618164 50 20 10 10 10 9.317526422142107 10.732462186783895 0.0 3 0.9956701285349496 18.748565303750162 17143.0 58.45090702322696 0.0 - - - - - - - 330.0 34 5 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 173 22 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1682.[MT7]-TAVDTVFR.2b4_1.heavy 526.797 / 531.289 26045.0 27.93320083618164 50 20 10 10 10 9.317526422142107 10.732462186783895 0.0 3 0.9956701285349496 18.748565303750162 26045.0 11.647611827141775 1.0 - - - - - - - 330.0 52 5 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 175 22 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1682.[MT7]-TAVDTVFR.2y7_1.heavy 526.797 / 807.436 32968.0 27.93320083618164 50 20 10 10 10 9.317526422142107 10.732462186783895 0.0 3 0.9956701285349496 18.748565303750162 32968.0 139.68990481445718 0.0 - - - - - - - 330.0 65 6 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 177 23 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1683.[MT7]-EANAFEEQLLK[MT7].3y3_1.heavy 527.291 / 517.383 18949.0 33.13719940185547 42 18 6 10 8 13.874714385235864 7.20735556952512 0.0 4 0.9866736931701264 10.678837742516995 18949.0 42.376669456903336 1.0 - - - - - - - 764.0 131 10 BUB1 budding uninhibited by benzimidazoles 1 homolog (yeast) 179 23 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1683.[MT7]-EANAFEEQLLK[MT7].3b6_1.heavy 527.291 / 806.38 10391.0 33.13719940185547 42 18 6 10 8 13.874714385235864 7.20735556952512 0.0 4 0.9866736931701264 10.678837742516995 10391.0 64.48532352941177 0.0 - - - - - - - 306.0 20 2 BUB1 budding uninhibited by benzimidazoles 1 homolog (yeast) 181 23 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1683.[MT7]-EANAFEEQLLK[MT7].3b4_1.heavy 527.291 / 530.269 45845.0 33.13719940185547 42 18 6 10 8 13.874714385235864 7.20735556952512 0.0 4 0.9866736931701264 10.678837742516995 45845.0 195.11662846309005 0.0 - - - - - - - 829.5714285714286 91 7 BUB1 budding uninhibited by benzimidazoles 1 homolog (yeast) 183 23 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1683.[MT7]-EANAFEEQLLK[MT7].3b5_1.heavy 527.291 / 677.338 14976.0 33.13719940185547 42 18 6 10 8 13.874714385235864 7.20735556952512 0.0 4 0.9866736931701264 10.678837742516995 14976.0 89.56235294117647 0.0 - - - - - - - 306.0 29 2 BUB1 budding uninhibited by benzimidazoles 1 homolog (yeast) 185 24 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2480.[MT7]-VVDPTPEQFQAFR.3y7_1.heavy 559.962 / 925.453 611.0 32.689867655436196 25 8 10 5 2 0.4537995458561568 113.26342907750126 0.04840087890625 12 0.7571623823163369 2.4518622433454054 611.0 2.934735294117647 10.0 - - - - - - - 306.0 2 3 RAF1 v-raf-1 murine leukemia viral oncogene homolog 1 187 24 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2480.[MT7]-VVDPTPEQFQAFR.3y6_1.heavy 559.962 / 796.41 3668.0 32.689867655436196 25 8 10 5 2 0.4537995458561568 113.26342907750126 0.04840087890625 12 0.7571623823163369 2.4518622433454054 3668.0 22.65529411764706 0.0 - - - - - - - 306.0 7 3 RAF1 v-raf-1 murine leukemia viral oncogene homolog 1 189 24 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2480.[MT7]-VVDPTPEQFQAFR.3b5_1.heavy 559.962 / 656.374 4584.0 32.689867655436196 25 8 10 5 2 0.4537995458561568 113.26342907750126 0.04840087890625 12 0.7571623823163369 2.4518622433454054 4584.0 4.099236641221373 0.0 - - - - - - - 306.0 9 4 RAF1 v-raf-1 murine leukemia viral oncogene homolog 1 191 24 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2480.[MT7]-VVDPTPEQFQAFR.3y4_1.heavy 559.962 / 521.283 N/A 32.689867655436196 25 8 10 5 2 0.4537995458561568 113.26342907750126 0.04840087890625 12 0.7571623823163369 2.4518622433454054 3056.0 9.654756559112194 0.0 - - - - - - - 306.0 6 5 RAF1 v-raf-1 murine leukemia viral oncogene homolog 1 193 25 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1688.[MT7]-ASTSDGILR.2y8_1.heavy 532.297 / 848.447 11305.0 21.788549423217773 37 11 10 6 10 4.306012758344114 18.2918383886778 0.03900146484375 3 0.8593485971486978 3.2513475600380937 11305.0 79.17898832684824 0.0 - - - - - - - 571.1111111111111 22 9 RHOBTB2 Rho-related BTB domain containing 2 195 25 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1688.[MT7]-ASTSDGILR.2b6_1.heavy 532.297 / 663.307 7965.0 21.788549423217773 37 11 10 6 10 4.306012758344114 18.2918383886778 0.03900146484375 3 0.8593485971486978 3.2513475600380937 7965.0 39.67003891050584 0.0 - - - - - - - 257.0 15 7 RHOBTB2 Rho-related BTB domain containing 2 197 25 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1688.[MT7]-ASTSDGILR.2b7_1.heavy 532.297 / 776.391 3597.0 21.788549423217773 37 11 10 6 10 4.306012758344114 18.2918383886778 0.03900146484375 3 0.8593485971486978 3.2513475600380937 3597.0 3.149124513618677 0.0 - - - - - - - 257.0 7 2 RHOBTB2 Rho-related BTB domain containing 2 199 25 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1688.[MT7]-ASTSDGILR.2b5_1.heavy 532.297 / 606.285 1285.0 21.788549423217773 37 11 10 6 10 4.306012758344114 18.2918383886778 0.03900146484375 3 0.8593485971486978 3.2513475600380937 1285.0 0.5 16.0 - - - - - - - 257.0 12 4 RHOBTB2 Rho-related BTB domain containing 2 201 26 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1689.[MT7]-ESLTEAEVATEK[MT7].3b6_1.heavy 532.285 / 775.395 7567.0 24.5447998046875 44 14 10 10 10 1.5151407976139355 46.25759217371931 0.0 3 0.9392626345884894 4.982087392657685 7567.0 38.893840463458105 0.0 - - - - - - - 280.0 15 5 LIG1 ligase I, DNA, ATP-dependent 203 26 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1689.[MT7]-ESLTEAEVATEK[MT7].3b5_1.heavy 532.285 / 704.358 10370.0 24.5447998046875 44 14 10 10 10 1.5151407976139355 46.25759217371931 0.0 3 0.9392626345884894 4.982087392657685 10370.0 20.70936344169749 0.0 - - - - - - - 280.0 20 7 LIG1 ligase I, DNA, ATP-dependent 205 26 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1689.[MT7]-ESLTEAEVATEK[MT7].3y4_1.heavy 532.285 / 592.342 15695.0 24.5447998046875 44 14 10 10 10 1.5151407976139355 46.25759217371931 0.0 3 0.9392626345884894 4.982087392657685 15695.0 19.321231043710974 0.0 - - - - - - - 280.0 31 4 LIG1 ligase I, DNA, ATP-dependent 207 26 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1689.[MT7]-ESLTEAEVATEK[MT7].3b7_1.heavy 532.285 / 904.438 12332.0 24.5447998046875 44 14 10 10 10 1.5151407976139355 46.25759217371931 0.0 3 0.9392626345884894 4.982087392657685 12332.0 66.02503183091419 0.0 - - - - - - - 280.0 24 3 LIG1 ligase I, DNA, ATP-dependent 209 27 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1686.[MT7]-SAQPIEK[MT7].2y4_1.heavy 530.816 / 630.394 115026.0 17.868200302124023 50 20 10 10 10 10.649346850079416 9.390247252511479 0.0 3 0.991969101675502 13.762243230985112 115026.0 702.9758896948081 0.0 - - - - - - - 178.0 230 1 CDK6 cyclin-dependent kinase 6 211 27 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1686.[MT7]-SAQPIEK[MT7].2b6_1.heavy 530.816 / 770.417 7668.0 17.868200302124023 50 20 10 10 10 10.649346850079416 9.390247252511479 0.0 3 0.991969101675502 13.762243230985112 7668.0 31.37318514502575 0.0 - - - - - - - 178.0 15 6 CDK6 cyclin-dependent kinase 6 213 27 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1686.[MT7]-SAQPIEK[MT7].2y3_1.heavy 530.816 / 533.341 7312.0 17.868200302124023 50 20 10 10 10 10.649346850079416 9.390247252511479 0.0 3 0.991969101675502 13.762243230985112 7312.0 26.67854953271028 1.0 - - - - - - - 237.66666666666666 14 9 CDK6 cyclin-dependent kinase 6 215 27 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1686.[MT7]-SAQPIEK[MT7].2y6_1.heavy 530.816 / 829.49 17299.0 17.868200302124023 50 20 10 10 10 10.649346850079416 9.390247252511479 0.0 3 0.991969101675502 13.762243230985112 17299.0 67.38659178678483 0.0 - - - - - - - 207.83333333333334 34 6 CDK6 cyclin-dependent kinase 6 217 28 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1687.[MT7]-DTLQPGMR.2y5_1.heavy 531.28 / 588.292 5198.0 21.256549835205078 33 15 6 6 6 2.579414722719591 30.641210927165247 0.03929901123046875 5 0.9508303760267328 5.542658944208426 5198.0 5.4433333333333325 1.0 - - - - - - - 361.6 17 10 CUL7 cullin 7 219 28 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1687.[MT7]-DTLQPGMR.2b4_1.heavy 531.28 / 602.327 7683.0 21.256549835205078 33 15 6 6 6 2.579414722719591 30.641210927165247 0.03929901123046875 5 0.9508303760267328 5.542658944208426 7683.0 16.415006321112514 0.0 - - - - - - - 423.75 15 8 CUL7 cullin 7 221 28 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1687.[MT7]-DTLQPGMR.2y6_1.heavy 531.28 / 701.376 3616.0 21.256549835205078 33 15 6 6 6 2.579414722719591 30.641210927165247 0.03929901123046875 5 0.9508303760267328 5.542658944208426 3616.0 5.119999999999999 0.0 - - - - - - - 326.44444444444446 7 9 CUL7 cullin 7 223 28 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1687.[MT7]-DTLQPGMR.2y7_1.heavy 531.28 / 802.424 6779.0 21.256549835205078 33 15 6 6 6 2.579414722719591 30.641210927165247 0.03929901123046875 5 0.9508303760267328 5.542658944208426 6779.0 20.996902654867256 1.0 - - - - - - - 282.5 24 8 CUL7 cullin 7 225 29 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1589.[MT7]-TSPVTAR.2y4_1.heavy 438.257 / 446.272 1392.0 16.144750595092773 36 15 10 5 6 3.263003875869397 30.646607789687636 0.04290008544921875 6 0.9578067222172757 5.986896637420171 1392.0 4.2 1.0 - - - - - - - 273.7692307692308 3 13 MCM3 minichromosome maintenance complex component 3 227 29 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1589.[MT7]-TSPVTAR.2y5_1.heavy 438.257 / 543.325 12062.0 16.144750595092773 36 15 10 5 6 3.263003875869397 30.646607789687636 0.04290008544921875 6 0.9578067222172757 5.986896637420171 12062.0 87.21134593993325 0.0 - - - - - - - 283.5833333333333 24 12 MCM3 minichromosome maintenance complex component 3 229 29 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1589.[MT7]-TSPVTAR.2b4_1.heavy 438.257 / 529.31 3402.0 16.144750595092773 36 15 10 5 6 3.263003875869397 30.646607789687636 0.04290008544921875 6 0.9578067222172757 5.986896637420171 3402.0 7.6969052868729975 1.0 - - - - - - - 331.42857142857144 8 7 MCM3 minichromosome maintenance complex component 3 231 29 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1589.[MT7]-TSPVTAR.2b6_1.heavy 438.257 / 701.395 2474.0 16.144750595092773 36 15 10 5 6 3.263003875869397 30.646607789687636 0.04290008544921875 6 0.9578067222172757 5.986896637420171 2474.0 20.76749827748199 5.0 - - - - - - - 232.0 15 14 MCM3 minichromosome maintenance complex component 3 233 30 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1587.[MT7]-LYTGLR.2y4_1.heavy 433.764 / 446.272 13996.0 26.527999877929688 43 17 10 10 6 3.844754493557771 26.009463066512804 0.0 5 0.976342283010182 8.007851565174196 13996.0 30.87220578778135 0.0 - - - - - - - 311.0 27 4 CUL3 cullin 3 235 30 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1587.[MT7]-LYTGLR.2y5_1.heavy 433.764 / 609.336 92060.0 26.527999877929688 43 17 10 10 6 3.844754493557771 26.009463066512804 0.0 5 0.976342283010182 8.007851565174196 92060.0 62.53271704180064 0.0 - - - - - - - 311.0 184 2 CUL3 cullin 3 237 30 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1587.[MT7]-LYTGLR.2b4_1.heavy 433.764 / 579.326 19594.0 26.527999877929688 43 17 10 10 6 3.844754493557771 26.009463066512804 0.0 5 0.976342283010182 8.007851565174196 19594.0 13.995722554015556 1.0 - - - - - - - 311.0 43 2 CUL3 cullin 3 239 30 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1587.[MT7]-LYTGLR.2y1_1.heavy 433.764 / 175.119 25503.0 26.527999877929688 43 17 10 10 6 3.844754493557771 26.009463066512804 0.0 5 0.976342283010182 8.007851565174196 25503.0 8.097008055968818 2.0 - - - - - - - 311.0 90 3 CUL3 cullin 3 241 31 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1588.[MT7]-ATVGLIR.2y5_1.heavy 437.286 / 557.377 11238.0 25.999150276184082 37 14 10 5 8 2.1184934568129776 37.72498759871029 0.04549980163574219 4 0.9371744384350326 4.897718220864334 11238.0 4.808948317200237 0.0 - - - - - - - 304.0 22 4 CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 243 31 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1588.[MT7]-ATVGLIR.2b4_1.heavy 437.286 / 473.284 27944.0 25.999150276184082 37 14 10 5 8 2.1184934568129776 37.72498759871029 0.04549980163574219 4 0.9371744384350326 4.897718220864334 27944.0 30.449391849908896 1.0 - - - - - - - 737.2857142857143 74 7 CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 245 31 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1588.[MT7]-ATVGLIR.2y6_1.heavy 437.286 / 658.425 54368.0 25.999150276184082 37 14 10 5 8 2.1184934568129776 37.72498759871029 0.04549980163574219 4 0.9371744384350326 4.897718220864334 54368.0 83.25286498353458 0.0 - - - - - - - 304.0 108 5 CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 247 31 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1588.[MT7]-ATVGLIR.2b5_1.heavy 437.286 / 586.368 27944.0 25.999150276184082 37 14 10 5 8 2.1184934568129776 37.72498759871029 0.04549980163574219 4 0.9371744384350326 4.897718220864334 27944.0 29.54658616904501 0.0 - - - - - - - 737.2857142857143 55 7 CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 249 32 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1585.[MT7]-FVALK[MT7].2b3_1.heavy 433.291 / 462.283 54121.0 28.315200805664062 46 16 10 10 10 2.9396933932700047 25.99743823759201 0.0 3 0.9621623939709739 6.324432416851461 54121.0 84.5504779116466 0.0 - - - - - - - 332.0 108 2 CDK6;CHD1;CHD2;RGS22;SRPK3 cyclin-dependent kinase 6;chromodomain helicase DNA binding protein 1;chromodomain helicase DNA binding protein 2;regulator of G-protein signaling 22;SRSF protein kinase 3 251 32 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1585.[MT7]-FVALK[MT7].2y4_1.heavy 433.291 / 574.404 163692.0 28.315200805664062 46 16 10 10 10 2.9396933932700047 25.99743823759201 0.0 3 0.9621623939709739 6.324432416851461 163692.0 38.75732552984709 0.0 - - - - - - - 332.0 327 1 CDK6;CHD1;CHD2;RGS22;SRPK3 cyclin-dependent kinase 6;chromodomain helicase DNA binding protein 1;chromodomain helicase DNA binding protein 2;regulator of G-protein signaling 22;SRSF protein kinase 3 253 32 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1585.[MT7]-FVALK[MT7].2b4_1.heavy 433.291 / 575.367 19258.0 28.315200805664062 46 16 10 10 10 2.9396933932700047 25.99743823759201 0.0 3 0.9621623939709739 6.324432416851461 19258.0 26.102710843373497 0.0 - - - - - - - 747.0 38 8 CDK6;CHD1;CHD2;RGS22;SRPK3 cyclin-dependent kinase 6;chromodomain helicase DNA binding protein 1;chromodomain helicase DNA binding protein 2;regulator of G-protein signaling 22;SRSF protein kinase 3 255 32 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1585.[MT7]-FVALK[MT7].2y3_1.heavy 433.291 / 475.336 123848.0 28.315200805664062 46 16 10 10 10 2.9396933932700047 25.99743823759201 0.0 3 0.9621623939709739 6.324432416851461 123848.0 112.90560642570281 0.0 - - - - - - - 332.0 247 1 CDK6;CHD1;CHD2;RGS22;SRPK3 cyclin-dependent kinase 6;chromodomain helicase DNA binding protein 1;chromodomain helicase DNA binding protein 2;regulator of G-protein signaling 22;SRSF protein kinase 3 257 33 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1586.[MT7]-ALFTDR.2y4_1.heavy 433.746 / 538.262 12584.0 26.295499801635742 44 14 10 10 10 1.5903999741115429 49.66237876993013 0.0 3 0.9452736405509845 5.251257326104699 12584.0 19.148488474416535 1.0 - - - - - - - 307.0 25 2 WEE1 WEE1 homolog (S. pombe) 259 33 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1586.[MT7]-ALFTDR.2y5_1.heavy 433.746 / 651.346 27316.0 26.295499801635742 44 14 10 10 10 1.5903999741115429 49.66237876993013 0.0 3 0.9452736405509845 5.251257326104699 27316.0 117.15331161780674 0.0 - - - - - - - 307.0 54 2 WEE1 WEE1 homolog (S. pombe) 261 33 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1586.[MT7]-ALFTDR.2b4_1.heavy 433.746 / 577.347 3069.0 26.295499801635742 44 14 10 10 10 1.5903999741115429 49.66237876993013 0.0 3 0.9452736405509845 5.251257326104699 3069.0 0.5414647832393807 3.0 - - - - - - - 307.0 9 3 WEE1 WEE1 homolog (S. pombe) 263 33 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1586.[MT7]-ALFTDR.2b5_1.heavy 433.746 / 692.374 22405.0 26.295499801635742 44 14 10 10 10 1.5903999741115429 49.66237876993013 0.0 3 0.9452736405509845 5.251257326104699 22405.0 24.505245830373983 0.0 - - - - - - - 307.0 44 6 WEE1 WEE1 homolog (S. pombe) 265 34 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1583.[MT7]-QLSSTVLLQR.3b5_1.heavy 430.262 / 661.364 N/A N/A - - - - - - - - - 0.0 - - - - - - - PIAS1 protein inhibitor of activated STAT, 1 267 34 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1583.[MT7]-QLSSTVLLQR.3b3_1.heavy 430.262 / 473.284 N/A N/A - - - - - - - - - 0.0 - - - - - - - PIAS1 protein inhibitor of activated STAT, 1 269 34 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1583.[MT7]-QLSSTVLLQR.3y4_1.heavy 430.262 / 529.346 N/A N/A - - - - - - - - - 0.0 - - - - - - - PIAS1 protein inhibitor of activated STAT, 1 271 34 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1583.[MT7]-QLSSTVLLQR.3y5_1.heavy 430.262 / 628.414 N/A N/A - - - - - - - - - 0.0 - - - - - - - PIAS1 protein inhibitor of activated STAT, 1 273 35 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1584.[MT7]-ELVSGGR.2b3_1.heavy 431.249 / 486.304 5353.0 18.78884983062744 43 18 10 5 10 14.828275383348014 6.743872595750337 0.044200897216796875 3 0.9861635783125979 10.47969017345209 5353.0 8.391949697339104 1.0 - - - - - - - 651.5714285714286 11 7 MCM7 minichromosome maintenance complex component 7 275 35 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1584.[MT7]-ELVSGGR.2y5_1.heavy 431.249 / 475.262 11498.0 18.78884983062744 43 18 10 5 10 14.828275383348014 6.743872595750337 0.044200897216796875 3 0.9861635783125979 10.47969017345209 11498.0 18.270376032463673 0.0 - - - - - - - 277.2 22 5 MCM7 minichromosome maintenance complex component 7 277 35 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1584.[MT7]-ELVSGGR.2y6_1.heavy 431.249 / 588.346 21410.0 18.78884983062744 43 18 10 5 10 14.828275383348014 6.743872595750337 0.044200897216796875 3 0.9861635783125979 10.47969017345209 21410.0 102.18409090909091 0.0 - - - - - - - 264.0 42 9 MCM7 minichromosome maintenance complex component 7 279 35 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1584.[MT7]-ELVSGGR.2b5_1.heavy 431.249 / 630.358 7732.0 18.78884983062744 43 18 10 5 10 14.828275383348014 6.743872595750337 0.044200897216796875 3 0.9861635783125979 10.47969017345209 7732.0 45.28873705529443 0.0 - - - - - - - 316.8 15 10 MCM7 minichromosome maintenance complex component 7 281 36 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1580.[MT7]-C[CAM]DLAAR.2b3_1.heavy 425.222 / 533.251 9577.0 17.34670066833496 34 18 0 10 6 6.0476052538820095 16.535470785863403 0.0 5 0.986906677036449 10.773639137368153 9577.0 12.545309941520468 2.0 - - - - - - - 726.75 25 8 HRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog 283 36 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1580.[MT7]-C[CAM]DLAAR.2y4_1.heavy 425.222 / 430.277 23944.0 17.34670066833496 34 18 0 10 6 6.0476052538820095 16.535470785863403 0.0 5 0.986906677036449 10.773639137368153 23944.0 21.964363366608396 0.0 - - - - - - - 703.0 47 9 HRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog 285 36 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1580.[MT7]-C[CAM]DLAAR.2y5_1.heavy 425.222 / 545.304 13169.0 17.34670066833496 34 18 0 10 6 6.0476052538820095 16.535470785863403 0.0 5 0.986906677036449 10.773639137368153 13169.0 33.73112280701754 2.0 - - - - - - - 244.28571428571428 184 7 HRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog 287 36 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1580.[MT7]-C[CAM]DLAAR.2b4_1.heavy 425.222 / 604.288 14879.0 17.34670066833496 34 18 0 10 6 6.0476052538820095 16.535470785863403 0.0 5 0.986906677036449 10.773639137368153 14879.0 5.813052419200654 0.0 - - - - - - - 256.5 29 4 HRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog 289 37 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1582.[MT7]-QFLFR.2b3_1.heavy 427.754 / 533.32 35319.0 31.919700622558594 50 20 10 10 10 12.53735493169984 7.976164074860549 0.0 3 0.9987856269072702 35.411338468544386 35319.0 159.15351851851852 0.0 - - - - - - - 324.0 70 6 UBA6;UBA1;UBA7;USH2A;UBA3 ubiquitin-like modifier activating enzyme 6;ubiquitin-like modifier activating enzyme 1;ubiquitin-like modifier activating enzyme 7;Usher syndrome 2A (autosomal recessive, mild);ubiquitin-like modifier activating enzyme 3 291 37 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1582.[MT7]-QFLFR.2y4_1.heavy 427.754 / 582.34 81980.0 31.919700622558594 50 20 10 10 10 12.53735493169984 7.976164074860549 0.0 3 0.9987856269072702 35.411338468544386 81980.0 155.6101851851852 0.0 - - - - - - - 324.0 163 2 UBA6;UBA1;UBA7;USH2A;UBA3 ubiquitin-like modifier activating enzyme 6;ubiquitin-like modifier activating enzyme 1;ubiquitin-like modifier activating enzyme 7;Usher syndrome 2A (autosomal recessive, mild);ubiquitin-like modifier activating enzyme 3 293 37 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1582.[MT7]-QFLFR.2b4_1.heavy 427.754 / 680.389 11341.0 31.919700622558594 50 20 10 10 10 12.53735493169984 7.976164074860549 0.0 3 0.9987856269072702 35.411338468544386 11341.0 45.970720164609055 0.0 - - - - - - - 324.0 22 2 UBA6;UBA1;UBA7;USH2A;UBA3 ubiquitin-like modifier activating enzyme 6;ubiquitin-like modifier activating enzyme 1;ubiquitin-like modifier activating enzyme 7;Usher syndrome 2A (autosomal recessive, mild);ubiquitin-like modifier activating enzyme 3 295 37 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1582.[MT7]-QFLFR.2y3_1.heavy 427.754 / 435.271 14581.0 31.919700622558594 50 20 10 10 10 12.53735493169984 7.976164074860549 0.0 3 0.9987856269072702 35.411338468544386 14581.0 64.80444444444444 0.0 - - - - - - - 324.0 29 3 UBA6;UBA1;UBA7;USH2A;UBA3 ubiquitin-like modifier activating enzyme 6;ubiquitin-like modifier activating enzyme 1;ubiquitin-like modifier activating enzyme 7;Usher syndrome 2A (autosomal recessive, mild);ubiquitin-like modifier activating enzyme 3 297 38 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1581.[MT7]-GFLTK[MT7].2y4_1.heavy 427.273 / 652.415 17305.0 25.735266367594402 41 18 8 5 10 3.90448126185491 25.611596853327658 0.04509925842285156 3 0.9801745270720635 8.750451493404448 17305.0 37.97746558677933 0.0 - - - - - - - 298.0 34 2 PRKCG;EFCAB2 protein kinase C, gamma;EF-hand calcium binding domain 2 299 38 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1581.[MT7]-GFLTK[MT7].2b3_1.heavy 427.273 / 462.283 14620.0 25.735266367594402 41 18 8 5 10 3.90448126185491 25.611596853327658 0.04509925842285156 3 0.9801745270720635 8.750451493404448 14620.0 50.890400940609936 0.0 - - - - - - - 298.0 29 4 PRKCG;EFCAB2 protein kinase C, gamma;EF-hand calcium binding domain 2 301 38 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1581.[MT7]-GFLTK[MT7].2y3_1.heavy 427.273 / 505.347 18200.0 25.735266367594402 41 18 8 5 10 3.90448126185491 25.611596853327658 0.04509925842285156 3 0.9801745270720635 8.750451493404448 18200.0 47.569029505067235 0.0 - - - - - - - 767.2857142857143 36 7 PRKCG;EFCAB2 protein kinase C, gamma;EF-hand calcium binding domain 2 303 38 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1581.[MT7]-GFLTK[MT7].2y1_1.heavy 427.273 / 291.215 N/A 25.735266367594402 41 18 8 5 10 3.90448126185491 25.611596853327658 0.04509925842285156 3 0.9801745270720635 8.750451493404448 11039.0 2.7221126452229107 6.0 - - - - - - - 1432.2 45 5 PRKCG;EFCAB2 protein kinase C, gamma;EF-hand calcium binding domain 2 305 39 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1988.[MT7]-IIQDIETIESNWR.2y8_1.heavy 880.969 / 1034.49 7224.0 45.12465000152588 43 17 10 6 10 4.850107957906922 20.618097755324047 0.038600921630859375 3 0.9718309000960631 7.335861187947556 7224.0 34.880724589372534 0.0 - - - - - - - 190.41666666666666 14 12 FBXW11;BTRC F-box and WD repeat domain containing 11;beta-transducin repeat containing 307 39 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1988.[MT7]-IIQDIETIESNWR.2y9_1.heavy 880.969 / 1147.57 6622.0 45.12465000152588 43 17 10 6 10 4.850107957906922 20.618097755324047 0.038600921630859375 3 0.9718309000960631 7.335861187947556 6622.0 53.5205 0.0 - - - - - - - 267.55555555555554 13 9 FBXW11;BTRC F-box and WD repeat domain containing 11;beta-transducin repeat containing 309 39 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1988.[MT7]-IIQDIETIESNWR.2b4_1.heavy 880.969 / 614.363 12521.0 45.12465000152588 43 17 10 6 10 4.850107957906922 20.618097755324047 0.038600921630859375 3 0.9718309000960631 7.335861187947556 12521.0 40.633775933609954 0.0 - - - - - - - 270.75 25 8 FBXW11;BTRC F-box and WD repeat domain containing 11;beta-transducin repeat containing 311 39 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1988.[MT7]-IIQDIETIESNWR.2b1_1.heavy 880.969 / 258.193 8187.0 45.12465000152588 43 17 10 6 10 4.850107957906922 20.618097755324047 0.038600921630859375 3 0.9718309000960631 7.335861187947556 8187.0 20.921755733081316 0.0 - - - - - - - 314.9230769230769 16 13 FBXW11;BTRC F-box and WD repeat domain containing 11;beta-transducin repeat containing 313 40 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1709.[MT7]-QFLFQK[MT7].2b3_1.heavy 549.831 / 533.32 19549.0 31.14859962463379 46 16 10 10 10 2.030275153771713 33.59764170519087 0.0 3 0.9678333261554644 6.862592550239095 19549.0 36.973963782696174 0.0 - - - - - - - 804.8571428571429 39 7 UBA2 ubiquitin-like modifier activating enzyme 2 315 40 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1709.[MT7]-QFLFQK[MT7].2y4_1.heavy 549.831 / 679.426 20543.0 31.14859962463379 46 16 10 10 10 2.030275153771713 33.59764170519087 0.0 3 0.9678333261554644 6.862592550239095 20543.0 49.17250225333903 0.0 - - - - - - - 331.0 41 7 UBA2 ubiquitin-like modifier activating enzyme 2 317 40 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1709.[MT7]-QFLFQK[MT7].2y5_1.heavy 549.831 / 826.494 34791.0 31.14859962463379 46 16 10 10 10 2.030275153771713 33.59764170519087 0.0 3 0.9678333261554644 6.862592550239095 34791.0 128.74038397081458 0.0 - - - - - - - 331.0 69 1 UBA2 ubiquitin-like modifier activating enzyme 2 319 40 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1709.[MT7]-QFLFQK[MT7].2y3_1.heavy 549.831 / 566.342 34129.0 31.14859962463379 46 16 10 10 10 2.030275153771713 33.59764170519087 0.0 3 0.9678333261554644 6.862592550239095 34129.0 10.11151168438769 1.0 - - - - - - - 331.0 72 5 UBA2 ubiquitin-like modifier activating enzyme 2 321 41 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1987.[MT7]-IYAGVGEFSFEEIR.2b4_1.heavy 880.952 / 549.315 4972.0 39.10219955444336 45 15 10 10 10 1.952416669566676 41.27573491703824 0.0 3 0.9591134483093897 6.082486803340207 4972.0 3.4955781683626275 1.0 - - - - - - - 314.1818181818182 10 11 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 323 41 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1987.[MT7]-IYAGVGEFSFEEIR.2y9_1.heavy 880.952 / 1113.52 7566.0 39.10219955444336 45 15 10 10 10 1.952416669566676 41.27573491703824 0.0 3 0.9591134483093897 6.082486803340207 7566.0 45.185833333333335 0.0 - - - - - - - 240.0 15 9 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 325 41 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1987.[MT7]-IYAGVGEFSFEEIR.2y10_1.heavy 880.952 / 1212.59 1946.0 39.10219955444336 45 15 10 10 10 1.952416669566676 41.27573491703824 0.0 3 0.9591134483093897 6.082486803340207 1946.0 17.829324074074073 0.0 - - - - - - - 259.2 3 5 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 327 41 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1987.[MT7]-IYAGVGEFSFEEIR.2b5_1.heavy 880.952 / 648.384 5405.0 39.10219955444336 45 15 10 10 10 1.952416669566676 41.27573491703824 0.0 3 0.9591134483093897 6.082486803340207 5405.0 29.519603521086573 0.0 - - - - - - - 316.8 10 15 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 329 42 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1989.[MT7]-DFSAFINLVEFC[CAM]R.2y8_1.heavy 881.441 / 1050.54 2131.0 45.9286003112793 44 14 10 10 10 2.418958567167244 34.15266461232505 0.0 3 0.9429932437791149 5.144156279755975 2131.0 12.09167513785663 0.0 - - - - - - - 206.0 4 8 PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 331 42 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1989.[MT7]-DFSAFINLVEFC[CAM]R.2b4_1.heavy 881.441 / 565.274 3777.0 45.9286003112793 44 14 10 10 10 2.418958567167244 34.15266461232505 0.0 3 0.9429932437791149 5.144156279755975 3777.0 45.48417965316071 0.0 - - - - - - - 193.86666666666667 7 15 PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 333 42 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1989.[MT7]-DFSAFINLVEFC[CAM]R.2b5_1.heavy 881.441 / 712.342 3681.0 45.9286003112793 44 14 10 10 10 2.418958567167244 34.15266461232505 0.0 3 0.9429932437791149 5.144156279755975 3681.0 39.85528499616596 0.0 - - - - - - - 200.71428571428572 7 14 PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 335 42 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1989.[MT7]-DFSAFINLVEFC[CAM]R.2y7_1.heavy 881.441 / 937.456 2906.0 45.9286003112793 44 14 10 10 10 2.418958567167244 34.15266461232505 0.0 3 0.9429932437791149 5.144156279755975 2906.0 41.92728865979382 0.0 - - - - - - - 221.42857142857142 5 7 PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 337 43 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1809.[MT7]-ELISDNQYR.2y4_1.heavy 641.331 / 580.284 13132.0 24.461700439453125 47 17 10 10 10 3.2766864676574095 24.271336297266323 0.0 3 0.9743686535752568 7.692095014769122 13132.0 52.70549087522417 0.0 - - - - - - - 279.0 26 4 MCM3 minichromosome maintenance complex component 3 339 43 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1809.[MT7]-ELISDNQYR.2y8_1.heavy 641.331 / 1008.51 10896.0 24.461700439453125 47 17 10 10 10 3.2766864676574095 24.271336297266323 0.0 3 0.9743686535752568 7.692095014769122 10896.0 73.4210752688172 0.0 - - - - - - - 279.0 21 3 MCM3 minichromosome maintenance complex component 3 341 43 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1809.[MT7]-ELISDNQYR.2y6_1.heavy 641.331 / 782.343 19558.0 24.461700439453125 47 17 10 10 10 3.2766864676574095 24.271336297266323 0.0 3 0.9743686535752568 7.692095014769122 19558.0 54.5938254896017 0.0 - - - - - - - 652.0 39 9 MCM3 minichromosome maintenance complex component 3 343 43 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1809.[MT7]-ELISDNQYR.2y7_1.heavy 641.331 / 895.427 10896.0 24.461700439453125 47 17 10 10 10 3.2766864676574095 24.271336297266323 0.0 3 0.9743686535752568 7.692095014769122 10896.0 51.52302229403505 0.0 - - - - - - - 279.0 21 8 MCM3 minichromosome maintenance complex component 3 345 44 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2467.[MT7]-LC[CAM]DVQPFLPVLR.2b3_1.heavy 800.954 / 533.251 28491.0 41.26449966430664 44 18 10 6 10 3.222101413772427 31.03564635568695 0.039398193359375 3 0.9825948840330908 9.340969999950012 28491.0 85.64333765124555 0.0 - - - - - - - 312.3333333333333 56 6 PIK3CD phosphoinositide-3-kinase, catalytic, delta polypeptide 347 44 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2467.[MT7]-LC[CAM]DVQPFLPVLR.2y9_1.heavy 800.954 / 1068.66 9934.0 41.26449966430664 44 18 10 6 10 3.222101413772427 31.03564635568695 0.039398193359375 3 0.9825948840330908 9.340969999950012 9934.0 63.67676292335116 0.0 - - - - - - - 234.0 19 12 PIK3CD phosphoinositide-3-kinase, catalytic, delta polypeptide 349 44 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2467.[MT7]-LC[CAM]DVQPFLPVLR.2b4_1.heavy 800.954 / 632.319 10122.0 41.26449966430664 44 18 10 6 10 3.222101413772427 31.03564635568695 0.039398193359375 3 0.9825948840330908 9.340969999950012 10122.0 9.22230522945571 1.0 - - - - - - - 306.6363636363636 20 11 PIK3CD phosphoinositide-3-kinase, catalytic, delta polypeptide 351 44 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2467.[MT7]-LC[CAM]DVQPFLPVLR.2y7_1.heavy 800.954 / 841.529 22680.0 41.26449966430664 44 18 10 6 10 3.222101413772427 31.03564635568695 0.039398193359375 3 0.9825948840330908 9.340969999950012 22680.0 120.41568 0.0 - - - - - - - 249.66666666666666 45 6 PIK3CD phosphoinositide-3-kinase, catalytic, delta polypeptide 353 45 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1808.[MT7]-EAQTLQQYR.2y8_1.heavy 640.839 / 1007.53 23344.0 22.01650047302246 47 17 10 10 10 9.876984723943966 10.124547399327062 0.0 3 0.979979165347042 8.70751092061311 23344.0 62.82461005448455 0.0 - - - - - - - 295.0 46 4 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 355 45 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1808.[MT7]-EAQTLQQYR.2y5_1.heavy 640.839 / 707.383 7310.0 22.01650047302246 47 17 10 10 10 9.876984723943966 10.124547399327062 0.0 3 0.979979165347042 8.70751092061311 7310.0 22.419109150624504 0.0 - - - - - - - 340.8888888888889 14 9 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 357 45 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1808.[MT7]-EAQTLQQYR.2y6_1.heavy 640.839 / 808.431 15327.0 22.01650047302246 47 17 10 10 10 9.876984723943966 10.124547399327062 0.0 3 0.979979165347042 8.70751092061311 15327.0 38.967913340043495 0.0 - - - - - - - 442.5 30 8 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 359 45 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1808.[MT7]-EAQTLQQYR.2y7_1.heavy 640.839 / 936.49 5423.0 22.01650047302246 47 17 10 10 10 9.876984723943966 10.124547399327062 0.0 3 0.979979165347042 8.70751092061311 5423.0 8.991525423728815 1.0 - - - - - - - 413.0 10 4 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 361 46 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2468.[MT7]-ELIINEILVMK[MT7].3y3_1.heavy 534.996 / 521.324 58106.0 43.19889831542969 41 11 10 10 10 1.8965281304646708 35.3555366516846 0.0 3 0.863292564305649 3.299056856882521 58106.0 92.3762614642476 0.0 - - - - - - - 343.6 116 5 PAK2 p21 protein (Cdc42/Rac)-activated kinase 2 363 46 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2468.[MT7]-ELIINEILVMK[MT7].3b6_1.heavy 534.996 / 856.49 43580.0 43.19889831542969 41 11 10 10 10 1.8965281304646708 35.3555366516846 0.0 3 0.863292564305649 3.299056856882521 43580.0 108.78996486555698 0.0 - - - - - - - 312.22222222222223 87 9 PAK2 p21 protein (Cdc42/Rac)-activated kinase 2 365 46 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2468.[MT7]-ELIINEILVMK[MT7].3y4_1.heavy 534.996 / 634.408 53733.0 43.19889831542969 41 11 10 10 10 1.8965281304646708 35.3555366516846 0.0 3 0.863292564305649 3.299056856882521 53733.0 199.74125627893233 0.0 - - - - - - - 245.28571428571428 107 7 PAK2 p21 protein (Cdc42/Rac)-activated kinase 2 367 46 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2468.[MT7]-ELIINEILVMK[MT7].3b3_1.heavy 534.996 / 500.32 31084.0 43.19889831542969 41 11 10 10 10 1.8965281304646708 35.3555366516846 0.0 3 0.863292564305649 3.299056856882521 31084.0 67.49625363950248 0.0 - - - - - - - 312.42857142857144 62 7 PAK2 p21 protein (Cdc42/Rac)-activated kinase 2 369 47 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1986.[MT7]-RLC[CAM]DVQPFLPVLR.3y7_1.heavy 586.339 / 841.529 83814.0 37.34547424316406 39 13 10 6 10 1.7992586714102528 43.065209976749635 0.0399017333984375 3 0.9127878106198285 4.148257872366593 83814.0 364.9094501278772 0.0 - - - - - - - 342.0 167 5 PIK3CD phosphoinositide-3-kinase, catalytic, delta polypeptide 371 47 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1986.[MT7]-RLC[CAM]DVQPFLPVLR.3b6_1.heavy 586.339 / 916.479 21748.0 37.34547424316406 39 13 10 6 10 1.7992586714102528 43.065209976749635 0.0399017333984375 3 0.9127878106198285 4.148257872366593 21748.0 82.27770961145194 0.0 - - - - - - - 380.1111111111111 43 9 PIK3CD phosphoinositide-3-kinase, catalytic, delta polypeptide 373 47 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1986.[MT7]-RLC[CAM]DVQPFLPVLR.3b4_1.heavy 586.339 / 689.352 37386.0 37.34547424316406 39 13 10 6 10 1.7992586714102528 43.065209976749635 0.0399017333984375 3 0.9127878106198285 4.148257872366593 37386.0 107.45424078969675 0.0 - - - - - - - 335.875 74 8 PIK3CD phosphoinositide-3-kinase, catalytic, delta polypeptide 375 47 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1986.[MT7]-RLC[CAM]DVQPFLPVLR.3b5_1.heavy 586.339 / 788.42 19304.0 37.34547424316406 39 13 10 6 10 1.7992586714102528 43.065209976749635 0.0399017333984375 3 0.9127878106198285 4.148257872366593 19304.0 76.18961145194274 0.0 - - - - - - - 293.0 38 5 PIK3CD phosphoinositide-3-kinase, catalytic, delta polypeptide 377 48 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1985.[MT7]-ALFPGDSEIDQLFR.2y4_1.heavy 876.458 / 563.33 4356.0 42.64420127868652 42 16 10 6 10 2.3434098156693275 42.67286043241134 0.03839874267578125 3 0.9674674316383671 6.823680992636121 4356.0 5.410150780623736 0.0 - - - - - - - 279.3333333333333 8 9 CDK2;CDK3 cyclin-dependent kinase 2;cyclin-dependent kinase 3 379 48 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1985.[MT7]-ALFPGDSEIDQLFR.2y8_1.heavy 876.458 / 1007.52 2513.0 42.64420127868652 42 16 10 6 10 2.3434098156693275 42.67286043241134 0.03839874267578125 3 0.9674674316383671 6.823680992636121 2513.0 23.933333333333334 0.0 - - - - - - - 188.875 5 8 CDK2;CDK3 cyclin-dependent kinase 2;cyclin-dependent kinase 3 381 48 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1985.[MT7]-ALFPGDSEIDQLFR.2y5_1.heavy 876.458 / 678.357 838.0 42.64420127868652 42 16 10 6 10 2.3434098156693275 42.67286043241134 0.03839874267578125 3 0.9674674316383671 6.823680992636121 838.0 3.326985074626865 9.0 - - - - - - - 0.0 1 0 CDK2;CDK3 cyclin-dependent kinase 2;cyclin-dependent kinase 3 383 48 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1985.[MT7]-ALFPGDSEIDQLFR.2y10_1.heavy 876.458 / 1179.56 2178.0 42.64420127868652 42 16 10 6 10 2.3434098156693275 42.67286043241134 0.03839874267578125 3 0.9674674316383671 6.823680992636121 2178.0 10.521909533841725 0.0 - - - - - - - 195.83333333333334 4 6 CDK2;CDK3 cyclin-dependent kinase 2;cyclin-dependent kinase 3 385 49 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1980.[MT7]-LTADPDSEIATTSLR.2y9_1.heavy 867.456 / 977.526 5333.0 29.241500854492188 35 5 10 10 10 0.6392563425005906 83.19753956286648 0.0 3 0.6546616186906866 2.03641090772695 5333.0 21.291566288927612 0.0 - - - - - - - 333.0 10 3 PIAS1;PIAS2 protein inhibitor of activated STAT, 1;protein inhibitor of activated STAT, 2 387 49 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1980.[MT7]-LTADPDSEIATTSLR.2b4_1.heavy 867.456 / 545.305 48333.0 29.241500854492188 35 5 10 10 10 0.6392563425005906 83.19753956286648 0.0 3 0.6546616186906866 2.03641090772695 48333.0 52.58062117576485 0.0 - - - - - - - 333.0 96 3 PIAS1;PIAS2 protein inhibitor of activated STAT, 1;protein inhibitor of activated STAT, 2 389 49 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1980.[MT7]-LTADPDSEIATTSLR.2y11_1.heavy 867.456 / 1189.61 14667.0 29.241500854492188 35 5 10 10 10 0.6392563425005906 83.19753956286648 0.0 3 0.6546616186906866 2.03641090772695 14667.0 24.9339 0.0 - - - - - - - 333.0 29 3 PIAS1;PIAS2 protein inhibitor of activated STAT, 1;protein inhibitor of activated STAT, 2 391 49 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1980.[MT7]-LTADPDSEIATTSLR.2y7_1.heavy 867.456 / 761.452 3000.0 29.241500854492188 35 5 10 10 10 0.6392563425005906 83.19753956286648 0.0 3 0.6546616186906866 2.03641090772695 3000.0 9.908559233896565 0.0 - - - - - - - 333.0 6 3 PIAS1;PIAS2 protein inhibitor of activated STAT, 1;protein inhibitor of activated STAT, 2 393 50 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1982.[MT7]-FYTGNDPLDVWDR.2y4_1.heavy 871.419 / 575.294 24273.0 38.69599914550781 44 14 10 10 10 1.5352408805979059 51.26122063870889 0.0 3 0.94030014437211 5.025636518236554 24273.0 40.96660099647416 0.0 - - - - - - - 331.0 48 2 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 395 50 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1982.[MT7]-FYTGNDPLDVWDR.2b6_1.heavy 871.419 / 842.38 37954.0 38.69599914550781 44 14 10 10 10 1.5352408805979059 51.26122063870889 0.0 3 0.94030014437211 5.025636518236554 37954.0 66.49056481440297 0.0 - - - - - - - 386.0 75 4 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 397 50 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1982.[MT7]-FYTGNDPLDVWDR.2y10_1.heavy 871.419 / 1186.55 11254.0 38.69599914550781 44 14 10 10 10 1.5352408805979059 51.26122063870889 0.0 3 0.94030014437211 5.025636518236554 11254.0 48.79285260770975 0.0 - - - - - - - 321.0 22 11 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 399 50 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1982.[MT7]-FYTGNDPLDVWDR.2y7_1.heavy 871.419 / 900.457 46560.0 38.69599914550781 44 14 10 10 10 1.5352408805979059 51.26122063870889 0.0 3 0.94030014437211 5.025636518236554 46560.0 49.382886963073446 1.0 - - - - - - - 331.0 101 4 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 401 51 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1681.[MT7]-GLDYGGVAR.2y8_1.heavy 526.286 / 850.442 9059.0 23.686399459838867 48 18 10 10 10 4.8149863947719735 20.76849066667732 0.0 3 0.9815419028351643 9.069818846700796 9059.0 29.573470919324578 0.0 - - - - - - - 266.0 18 3 NEDD4L;NEDD4 neural precursor cell expressed, developmentally down-regulated 4-like;neural precursor cell expressed, developmentally down-regulated 4 403 51 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1681.[MT7]-GLDYGGVAR.2b6_1.heavy 526.286 / 707.348 18117.0 23.686399459838867 48 18 10 10 10 4.8149863947719735 20.76849066667732 0.0 3 0.9815419028351643 9.069818846700796 18117.0 7.500069560176798 0.0 - - - - - - - 266.0 36 3 NEDD4L;NEDD4 neural precursor cell expressed, developmentally down-regulated 4-like;neural precursor cell expressed, developmentally down-regulated 4 405 51 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1681.[MT7]-GLDYGGVAR.2y6_1.heavy 526.286 / 622.331 62345.0 23.686399459838867 48 18 10 10 10 4.8149863947719735 20.76849066667732 0.0 3 0.9815419028351643 9.069818846700796 62345.0 90.84668542839273 0.0 - - - - - - - 266.0 124 3 NEDD4L;NEDD4 neural precursor cell expressed, developmentally down-regulated 4-like;neural precursor cell expressed, developmentally down-regulated 4 407 51 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1681.[MT7]-GLDYGGVAR.2y7_1.heavy 526.286 / 737.358 14121.0 23.686399459838867 48 18 10 10 10 4.8149863947719735 20.76849066667732 0.0 3 0.9815419028351643 9.069818846700796 14121.0 98.74082706766917 0.0 - - - - - - - 599.5 28 8 NEDD4L;NEDD4 neural precursor cell expressed, developmentally down-regulated 4-like;neural precursor cell expressed, developmentally down-regulated 4 409 52 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1981.[MT7]-GLQSFVQC[CAM]QPFER.2y4_1.heavy 870.436 / 548.283 4928.0 34.03412342071533 36 11 10 5 10 1.0069168925423209 59.03149307819592 0.046100616455078125 3 0.8775861306374318 3.4907104726328093 4928.0 27.188965517241378 0.0 - - - - - - - 290.0 9 4 HUWE1 HECT, UBA and WWE domain containing 1 411 52 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1981.[MT7]-GLQSFVQC[CAM]QPFER.2y8_1.heavy 870.436 / 1063.5 2319.0 34.03412342071533 36 11 10 5 10 1.0069168925423209 59.03149307819592 0.046100616455078125 3 0.8775861306374318 3.4907104726328093 2319.0 7.596724137931035 0.0 - - - - - - - 290.0 4 3 HUWE1 HECT, UBA and WWE domain containing 1 413 52 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1981.[MT7]-GLQSFVQC[CAM]QPFER.2b4_1.heavy 870.436 / 530.305 1739.0 34.03412342071533 36 11 10 5 10 1.0069168925423209 59.03149307819592 0.046100616455078125 3 0.8775861306374318 3.4907104726328093 1739.0 9.294655172413792 2.0 - - - - - - - 290.0 3 7 HUWE1 HECT, UBA and WWE domain containing 1 415 52 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1981.[MT7]-GLQSFVQC[CAM]QPFER.2y9_1.heavy 870.436 / 1210.57 2029.0 34.03412342071533 36 11 10 5 10 1.0069168925423209 59.03149307819592 0.046100616455078125 3 0.8775861306374318 3.4907104726328093 2029.0 13.293448275862069 0.0 - - - - - - - 290.0 4 1 HUWE1 HECT, UBA and WWE domain containing 1 417 53 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2271.[MT7]-DVFDNAIR.2y5_1.heavy 547.292 / 588.31 12000.0 29.001300811767578 46 16 10 10 10 2.651933293611324 29.548497266554225 0.0 3 0.963950751496518 6.4803861750606755 12000.0 13.742025506376592 0.0 - - - - - - - 333.0 24 2 RHOBTB2;RHOBTB1 Rho-related BTB domain containing 2;Rho-related BTB domain containing 1 419 53 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2271.[MT7]-DVFDNAIR.2b4_1.heavy 547.292 / 621.3 32000.0 29.001300811767578 46 16 10 10 10 2.651933293611324 29.548497266554225 0.0 3 0.963950751496518 6.4803861750606755 32000.0 73.8984107946027 0.0 - - - - - - - 333.0 64 5 RHOBTB2;RHOBTB1 Rho-related BTB domain containing 2;Rho-related BTB domain containing 1 421 53 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2271.[MT7]-DVFDNAIR.2b6_1.heavy 547.292 / 806.38 14000.0 29.001300811767578 46 16 10 10 10 2.651933293611324 29.548497266554225 0.0 3 0.963950751496518 6.4803861750606755 14000.0 53.37951951951952 0.0 - - - - - - - 333.0 28 2 RHOBTB2;RHOBTB1 Rho-related BTB domain containing 2;Rho-related BTB domain containing 1 423 53 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2271.[MT7]-DVFDNAIR.2y7_1.heavy 547.292 / 834.447 22000.0 29.001300811767578 46 16 10 10 10 2.651933293611324 29.548497266554225 0.0 3 0.963950751496518 6.4803861750606755 22000.0 77.25074399737068 0.0 - - - - - - - 333.0 44 6 RHOBTB2;RHOBTB1 Rho-related BTB domain containing 2;Rho-related BTB domain containing 1 425 54 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1671.[MT7]-GPQTDDPR.2b6_1.heavy 515.258 / 758.344 37798.0 14.576050281524658 36 14 10 6 6 0.9655808620403213 62.39298039445454 0.03380012512207031 6 0.9446319440009813 5.220453581973032 37798.0 192.55418859138535 0.0 - - - - - - - 286.3333333333333 75 12 PRKCG protein kinase C, gamma 427 54 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1671.[MT7]-GPQTDDPR.2y2_1.heavy 515.258 / 272.172 96582.0 14.576050281524658 36 14 10 6 6 0.9655808620403213 62.39298039445454 0.03380012512207031 6 0.9446319440009813 5.220453581973032 96582.0 278.5596971326618 0.0 - - - - - - - 306.5 193 4 PRKCG protein kinase C, gamma 429 54 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1671.[MT7]-GPQTDDPR.2b5_1.heavy 515.258 / 643.317 3927.0 14.576050281524658 36 14 10 6 6 0.9655808620403213 62.39298039445454 0.03380012512207031 6 0.9446319440009813 5.220453581973032 3927.0 8.913466588853224 0.0 - - - - - - - 256.54545454545456 7 11 PRKCG protein kinase C, gamma 431 54 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1671.[MT7]-GPQTDDPR.2y1_1.heavy 515.258 / 175.119 5645.0 14.576050281524658 36 14 10 6 6 0.9655808620403213 62.39298039445454 0.03380012512207031 6 0.9446319440009813 5.220453581973032 5645.0 8.603219233903829 7.0 - - - - - - - 1242.375 27 8 PRKCG protein kinase C, gamma 433 55 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1800.[MT7]-QIYSVDQTR.2y8_1.heavy 627.334 / 981.5 N/A N/A - - - - - - - - - 0.0 - - - - - - - PLCG2 phospholipase C, gamma 2 (phosphatidylinositol-specific) 435 55 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1800.[MT7]-QIYSVDQTR.2y5_1.heavy 627.334 / 618.321 N/A N/A - - - - - - - - - 0.0 - - - - - - - PLCG2 phospholipase C, gamma 2 (phosphatidylinositol-specific) 437 55 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1800.[MT7]-QIYSVDQTR.2b6_1.heavy 627.334 / 850.443 N/A N/A - - - - - - - - - 0.0 - - - - - - - PLCG2 phospholipase C, gamma 2 (phosphatidylinositol-specific) 439 55 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1800.[MT7]-QIYSVDQTR.2y7_1.heavy 627.334 / 868.416 N/A N/A - - - - - - - - - 0.0 - - - - - - - PLCG2 phospholipase C, gamma 2 (phosphatidylinositol-specific) 441 56 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2470.[MT7]-TQRPADVIFATVR.2b6_1.heavy 809.463 / 813.433 3268.0 31.276365915934246 39 14 10 5 10 1.579021106272818 44.074454709878 0.04780006408691406 3 0.9414408982591387 5.074844213683881 3268.0 8.469816513761469 0.0 - - - - - - - 327.0 6 3 MCM7 minichromosome maintenance complex component 7 443 56 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2470.[MT7]-TQRPADVIFATVR.2b7_1.heavy 809.463 / 912.502 N/A 31.276365915934246 39 14 10 5 10 1.579021106272818 44.074454709878 0.04780006408691406 3 0.9414408982591387 5.074844213683881 654.0 1.6949999999999998 15.0 - - - - - - - 327.0 2 3 MCM7 minichromosome maintenance complex component 7 445 56 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2470.[MT7]-TQRPADVIFATVR.2y10_1.heavy 809.463 / 1088.61 3922.0 31.276365915934246 39 14 10 5 10 1.579021106272818 44.074454709878 0.04780006408691406 3 0.9414408982591387 5.074844213683881 3922.0 16.191743119266057 0.0 - - - - - - - 327.0 7 5 MCM7 minichromosome maintenance complex component 7 447 56 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2470.[MT7]-TQRPADVIFATVR.2y7_1.heavy 809.463 / 805.493 5229.0 31.276365915934246 39 14 10 5 10 1.579021106272818 44.074454709878 0.04780006408691406 3 0.9414408982591387 5.074844213683881 5229.0 29.742935779816513 0.0 - - - - - - - 327.0 10 5 MCM7 minichromosome maintenance complex component 7 449 57 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1672.[MT7]-QINLQK[MT7].2b3_1.heavy 516.326 / 500.295 7846.0 22.43600082397461 44 14 10 10 10 2.1597121152674488 36.35780981384009 0.0 3 0.9345074624575006 4.795868013171477 7846.0 11.035140543256585 0.0 - - - - - - - 326.6666666666667 15 6 PAK2 p21 protein (Cdc42/Rac)-activated kinase 2 451 57 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1672.[MT7]-QINLQK[MT7].2y4_1.heavy 516.326 / 646.4 20351.0 22.43600082397461 44 14 10 10 10 2.1597121152674488 36.35780981384009 0.0 3 0.9345074624575006 4.795868013171477 20351.0 8.110081202389901 1.0 - - - - - - - 315.0 42 7 PAK2 p21 protein (Cdc42/Rac)-activated kinase 2 453 57 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1672.[MT7]-QINLQK[MT7].2y5_1.heavy 516.326 / 759.484 33347.0 22.43600082397461 44 14 10 10 10 2.1597121152674488 36.35780981384009 0.0 3 0.9345074624575006 4.795868013171477 33347.0 70.6903784957674 0.0 - - - - - - - 806.0 66 7 PAK2 p21 protein (Cdc42/Rac)-activated kinase 2 455 57 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1672.[MT7]-QINLQK[MT7].2y3_1.heavy 516.326 / 532.357 13241.0 22.43600082397461 44 14 10 10 10 2.1597121152674488 36.35780981384009 0.0 3 0.9345074624575006 4.795868013171477 13241.0 38.16920918367347 0.0 - - - - - - - 336.875 26 8 PAK2 p21 protein (Cdc42/Rac)-activated kinase 2 457 58 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1801.[MT7]-EFLQQQYR.2b3_1.heavy 628.331 / 534.304 11893.0 26.157800674438477 48 18 10 10 10 4.474750054352671 22.347616913871686 0.0 3 0.9851575102480692 10.117433430793959 11893.0 50.37952786885245 0.0 - - - - - - - 762.5 23 8 BUB1 budding uninhibited by benzimidazoles 1 homolog (yeast) 459 58 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1801.[MT7]-EFLQQQYR.2y5_1.heavy 628.331 / 722.358 15857.0 26.157800674438477 48 18 10 10 10 4.474750054352671 22.347616913871686 0.0 3 0.9851575102480692 10.117433430793959 15857.0 98.78131147540982 0.0 - - - - - - - 305.0 31 3 BUB1 budding uninhibited by benzimidazoles 1 homolog (yeast) 461 58 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1801.[MT7]-EFLQQQYR.2y6_1.heavy 628.331 / 835.442 10368.0 26.157800674438477 48 18 10 10 10 4.474750054352671 22.347616913871686 0.0 3 0.9851575102480692 10.117433430793959 10368.0 27.591344262295078 0.0 - - - - - - - 827.8571428571429 20 7 BUB1 budding uninhibited by benzimidazoles 1 homolog (yeast) 463 58 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1801.[MT7]-EFLQQQYR.2y7_1.heavy 628.331 / 982.51 19821.0 26.157800674438477 48 18 10 10 10 4.474750054352671 22.347616913871686 0.0 3 0.9851575102480692 10.117433430793959 19821.0 71.45308032786885 0.0 - - - - - - - 305.0 39 3 BUB1 budding uninhibited by benzimidazoles 1 homolog (yeast) 465 59 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1673.[MT7]-LFWVAPR.2b3_1.heavy 516.809 / 591.341 7392.0 37.495399475097656 50 20 10 10 10 11.068736635560272 9.034454725278431 0.0 3 0.9948116373324081 17.126130733472248 7392.0 14.544873829514987 1.0 - - - - - - - 408.7142857142857 16 7 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 467 59 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1673.[MT7]-LFWVAPR.2y5_1.heavy 516.809 / 628.357 13354.0 37.495399475097656 50 20 10 10 10 11.068736635560272 9.034454725278431 0.0 3 0.9948116373324081 17.126130733472248 13354.0 61.25321865659016 0.0 - - - - - - - 340.42857142857144 26 7 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 469 59 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1673.[MT7]-LFWVAPR.2b4_1.heavy 516.809 / 690.409 5008.0 37.495399475097656 50 20 10 10 10 11.068736635560272 9.034454725278431 0.0 3 0.9948116373324081 17.126130733472248 5008.0 11.898812019566737 0.0 - - - - - - - 357.5 10 4 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 471 59 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1673.[MT7]-LFWVAPR.2y6_1.heavy 516.809 / 775.425 27423.0 37.495399475097656 50 20 10 10 10 11.068736635560272 9.034454725278431 0.0 3 0.9948116373324081 17.126130733472248 27423.0 133.623520529017 0.0 - - - - - - - 317.6666666666667 54 6 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 473 60 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1802.[MT7]-FYDSNTVK[MT7].2b3_1.heavy 631.337 / 570.268 32752.0 23.852699279785156 47 17 10 10 10 2.2236364621473625 35.86859201854083 0.0 3 0.9720344852231604 7.362641010745947 32752.0 28.2772504491969 0.0 - - - - - - - 268.0 65 2 PAK2 p21 protein (Cdc42/Rac)-activated kinase 2 475 60 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1802.[MT7]-FYDSNTVK[MT7].2y5_1.heavy 631.337 / 692.406 30068.0 23.852699279785156 47 17 10 10 10 2.2236364621473625 35.86859201854083 0.0 3 0.9720344852231604 7.362641010745947 30068.0 72.79699228756103 0.0 - - - - - - - 268.0 60 2 PAK2 p21 protein (Cdc42/Rac)-activated kinase 2 477 60 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1802.[MT7]-FYDSNTVK[MT7].2y6_1.heavy 631.337 / 807.433 12349.0 23.852699279785156 47 17 10 10 10 2.2236364621473625 35.86859201854083 0.0 3 0.9720344852231604 7.362641010745947 12349.0 55.585954853063875 0.0 - - - - - - - 728.4285714285714 24 7 PAK2 p21 protein (Cdc42/Rac)-activated kinase 2 479 60 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1802.[MT7]-FYDSNTVK[MT7].2y7_1.heavy 631.337 / 970.496 23356.0 23.852699279785156 47 17 10 10 10 2.2236364621473625 35.86859201854083 0.0 3 0.9720344852231604 7.362641010745947 23356.0 25.806132836747363 0.0 - - - - - - - 268.0 46 6 PAK2 p21 protein (Cdc42/Rac)-activated kinase 2 481 61 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2472.[MT7]-ENVVNFIDC[CAM]LVR.3b4_1.heavy 541.288 / 586.332 2953.0 45.134300231933594 50 20 10 10 10 10.590772545831884 9.442181820754532 0.0 3 0.9974480056146648 24.424749004453275 2953.0 19.519830508474577 0.0 - - - - - - - 182.36363636363637 5 11 ORC3 origin recognition complex, subunit 3 483 61 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2472.[MT7]-ENVVNFIDC[CAM]LVR.3b5_1.heavy 541.288 / 700.375 3780.0 45.134300231933594 50 20 10 10 10 10.590772545831884 9.442181820754532 0.0 3 0.9974480056146648 24.424749004453275 3780.0 3.7711864406779663 1.0 - - - - - - - 182.36363636363637 7 11 ORC3 origin recognition complex, subunit 3 485 61 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2472.[MT7]-ENVVNFIDC[CAM]LVR.3y4_1.heavy 541.288 / 547.302 2717.0 45.134300231933594 50 20 10 10 10 10.590772545831884 9.442181820754532 0.0 3 0.9974480056146648 24.424749004453275 2717.0 19.226228813559324 0.0 - - - - - - - 226.16666666666666 5 12 ORC3 origin recognition complex, subunit 3 487 61 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2472.[MT7]-ENVVNFIDC[CAM]LVR.3y5_1.heavy 541.288 / 662.329 6378.0 45.134300231933594 50 20 10 10 10 10.590772545831884 9.442181820754532 0.0 3 0.9974480056146648 24.424749004453275 6378.0 77.02245762711864 0.0 - - - - - - - 151.71428571428572 12 7 ORC3 origin recognition complex, subunit 3 489 62 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1700.[MT7]-DVK[MT7]PSNILVNSR.3b6_1.heavy 543.989 / 929.529 6246.0 24.861699104309082 33 8 10 5 10 0.5148784750344269 107.26915543830843 0.04220008850097656 3 0.7574625736039783 2.4534465716680853 6246.0 13.195774647887323 0.0 - - - - - - - 284.0 12 3 MAP2K1;MAP2K2 mitogen-activated protein kinase kinase 1;mitogen-activated protein kinase kinase 2 491 62 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1700.[MT7]-DVK[MT7]PSNILVNSR.3y5_1.heavy 543.989 / 588.346 30945.0 24.861699104309082 33 8 10 5 10 0.5148784750344269 107.26915543830843 0.04220008850097656 3 0.7574625736039783 2.4534465716680853 30945.0 54.93060774796771 0.0 - - - - - - - 284.0 61 2 MAP2K1;MAP2K2 mitogen-activated protein kinase kinase 1;mitogen-activated protein kinase kinase 2 493 62 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1700.[MT7]-DVK[MT7]PSNILVNSR.3b7_2.heavy 543.989 / 521.81 28957.0 24.861699104309082 33 8 10 5 10 0.5148784750344269 107.26915543830843 0.04220008850097656 3 0.7574625736039783 2.4534465716680853 28957.0 36.25644239868434 0.0 - - - - - - - 284.0 57 2 MAP2K1;MAP2K2 mitogen-activated protein kinase kinase 1;mitogen-activated protein kinase kinase 2 495 62 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1700.[MT7]-DVK[MT7]PSNILVNSR.3y9_1.heavy 543.989 / 999.558 11640.0 24.861699104309082 33 8 10 5 10 0.5148784750344269 107.26915543830843 0.04220008850097656 3 0.7574625736039783 2.4534465716680853 11640.0 12.095774647887323 1.0 - - - - - - - 284.0 23 6 MAP2K1;MAP2K2 mitogen-activated protein kinase kinase 1;mitogen-activated protein kinase kinase 2 497 63 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1803.[MT7]-SDGSFIGYK[MT7].2y4_1.heavy 631.337 / 624.384 10352.0 26.691699981689453 45 20 10 5 10 11.687148642534368 8.556406961066504 0.047199249267578125 3 0.9977061208213057 25.762858421778546 10352.0 35.281810737033666 0.0 - - - - - - - 314.0 20 5 AKT2 v-akt murine thymoma viral oncogene homolog 2 499 63 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1803.[MT7]-SDGSFIGYK[MT7].2y3_1.heavy 631.337 / 511.3 25409.0 26.691699981689453 45 20 10 5 10 11.687148642534368 8.556406961066504 0.047199249267578125 3 0.9977061208213057 25.762858421778546 25409.0 16.201275239107332 0.0 - - - - - - - 806.4285714285714 50 7 AKT2 v-akt murine thymoma viral oncogene homolog 2 501 63 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1803.[MT7]-SDGSFIGYK[MT7].2b5_1.heavy 631.337 / 638.29 10979.0 26.691699981689453 45 20 10 5 10 11.687148642534368 8.556406961066504 0.047199249267578125 3 0.9977061208213057 25.762858421778546 10979.0 50.550309938134276 0.0 - - - - - - - 314.0 21 2 AKT2 v-akt murine thymoma viral oncogene homolog 2 503 63 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1803.[MT7]-SDGSFIGYK[MT7].2y7_1.heavy 631.337 / 915.506 10665.0 26.691699981689453 45 20 10 5 10 11.687148642534368 8.556406961066504 0.047199249267578125 3 0.9977061208213057 25.762858421778546 10665.0 20.189801160875362 0.0 - - - - - - - 314.0 21 5 AKT2 v-akt murine thymoma viral oncogene homolog 2 505 64 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1675.[MT7]-TDRETK[MT7].2y4_1.heavy 519.295 / 677.406 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDK6 cyclin-dependent kinase 6 507 64 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1675.[MT7]-TDRETK[MT7].2b4_1.heavy 519.295 / 646.328 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDK6 cyclin-dependent kinase 6 509 64 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1675.[MT7]-TDRETK[MT7].2y3_1.heavy 519.295 / 521.305 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDK6 cyclin-dependent kinase 6 511 64 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1675.[MT7]-TDRETK[MT7].2b5_1.heavy 519.295 / 747.375 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDK6 cyclin-dependent kinase 6 513 65 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1804.[MT7]-ENVFPGTTTR.2y8_1.heavy 633.334 / 878.473 7366.0 24.76627492904663 42 17 10 5 10 2.8711242357385456 34.82956214685596 0.04269981384277344 3 0.9702870697382282 7.141811361579445 7366.0 32.78581949698607 0.0 - - - - - - - 283.0 14 6 PRKCG protein kinase C, gamma 515 65 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1804.[MT7]-ENVFPGTTTR.2y9_1.heavy 633.334 / 992.516 16715.0 24.76627492904663 42 17 10 5 10 2.8711242357385456 34.82956214685596 0.04269981384277344 3 0.9702870697382282 7.141811361579445 16715.0 57.288221783413015 0.0 - - - - - - - 283.0 33 6 PRKCG protein kinase C, gamma 517 65 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1804.[MT7]-ENVFPGTTTR.2y6_1.heavy 633.334 / 632.336 43912.0 24.76627492904663 42 17 10 5 10 2.8711242357385456 34.82956214685596 0.04269981384277344 3 0.9702870697382282 7.141811361579445 43912.0 52.274402291502355 0.0 - - - - - - - 283.0 87 1 PRKCG protein kinase C, gamma 519 65 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1804.[MT7]-ENVFPGTTTR.2y7_1.heavy 633.334 / 779.405 35130.0 24.76627492904663 42 17 10 5 10 2.8711242357385456 34.82956214685596 0.04269981384277344 3 0.9702870697382282 7.141811361579445 35130.0 148.31854687046803 0.0 - - - - - - - 283.0 70 7 PRKCG protein kinase C, gamma 521 66 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1676.[MT7]-LYTETK[MT7].2y4_1.heavy 521.805 / 622.353 28553.0 21.478474617004395 19 5 0 6 8 0.5499991257196227 92.88855025711757 0.038700103759765625 4 0.6472303265318469 2.0134135378821507 28553.0 138.75591721371262 0.0 - - - - - - - 342.5 57 2 CUL2 cullin 2 523 66 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1676.[MT7]-LYTETK[MT7].2y5_1.heavy 521.805 / 785.416 39745.0 21.478474617004395 19 5 0 6 8 0.5499991257196227 92.88855025711757 0.038700103759765625 4 0.6472303265318469 2.0134135378821507 39745.0 106.97231947483588 0.0 - - - - - - - 399.75 79 8 CUL2 cullin 2 525 66 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1676.[MT7]-LYTETK[MT7].2y3_1.heavy 521.805 / 521.305 134768.0 21.478474617004395 19 5 0 6 8 0.5499991257196227 92.88855025711757 0.038700103759765625 4 0.6472303265318469 2.0134135378821507 134768.0 10.092073732718895 1.0 - - - - - - - 6396.0 2934 1 CUL2 cullin 2 527 66 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1676.[MT7]-LYTETK[MT7].2y2_1.heavy 521.805 / 392.263 26497.0 21.478474617004395 19 5 0 6 8 0.5499991257196227 92.88855025711757 0.038700103759765625 4 0.6472303265318469 2.0134135378821507 26497.0 60.30307255879546 0.0 - - - - - - - 342.5 52 12 CUL2 cullin 2 529 67 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2268.[MT7]-GELVAAILR.2b6_1.heavy 543.344 / 685.4 37293.0 36.532501220703125 50 20 10 10 10 29.24440016833254 3.419458064600195 0.0 3 0.9988019324026365 35.651543705350015 37293.0 48.81809716599191 0.0 - - - - - - - 432.25 74 8 KLHL13 kelch-like 13 (Drosophila) 531 67 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2268.[MT7]-GELVAAILR.2y6_1.heavy 543.344 / 642.43 40750.0 36.532501220703125 50 20 10 10 10 29.24440016833254 3.419458064600195 0.0 3 0.9988019324026365 35.651543705350015 40750.0 105.03711201079622 0.0 - - - - - - - 370.5 81 4 KLHL13 kelch-like 13 (Drosophila) 533 67 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2268.[MT7]-GELVAAILR.2b5_1.heavy 543.344 / 614.363 36305.0 36.532501220703125 50 20 10 10 10 29.24440016833254 3.419458064600195 0.0 3 0.9988019324026365 35.651543705350015 36305.0 144.63206477732794 0.0 - - - - - - - 370.5 72 6 KLHL13 kelch-like 13 (Drosophila) 535 67 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2268.[MT7]-GELVAAILR.2y7_1.heavy 543.344 / 755.514 39515.0 36.532501220703125 50 20 10 10 10 29.24440016833254 3.419458064600195 0.0 3 0.9988019324026365 35.651543705350015 39515.0 305.8812955465587 0.0 - - - - - - - 271.7 79 10 KLHL13 kelch-like 13 (Drosophila) 537 68 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1677.[MT7]-ALLVNVK[MT7].2y4_1.heavy 522.855 / 603.395 47000.0 28.90410041809082 47 17 10 10 10 2.916133381621597 27.44706527236304 0.0 3 0.9748745501387661 7.769479199756833 47000.0 51.07283893412273 0.0 - - - - - - - 333.0 94 1 PIK3CD phosphoinositide-3-kinase, catalytic, delta polypeptide 539 68 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1677.[MT7]-ALLVNVK[MT7].2y5_1.heavy 522.855 / 716.479 34667.0 28.90410041809082 47 17 10 10 10 2.916133381621597 27.44706527236304 0.0 3 0.9748745501387661 7.769479199756833 34667.0 42.467074999999994 1.0 - - - - - - - 667.0 69 4 PIK3CD phosphoinositide-3-kinase, catalytic, delta polypeptide 541 68 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1677.[MT7]-ALLVNVK[MT7].2y3_1.heavy 522.855 / 504.326 42667.0 28.90410041809082 47 17 10 10 10 2.916133381621597 27.44706527236304 0.0 3 0.9748745501387661 7.769479199756833 42667.0 121.22033733133433 0.0 - - - - - - - 333.0 85 4 PIK3CD phosphoinositide-3-kinase, catalytic, delta polypeptide 543 68 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1677.[MT7]-ALLVNVK[MT7].2y6_1.heavy 522.855 / 829.563 21000.0 28.90410041809082 47 17 10 10 10 2.916133381621597 27.44706527236304 0.0 3 0.9748745501387661 7.769479199756833 21000.0 106.89189189189189 1.0 - - - - - - - 333.0 42 4 PIK3CD phosphoinositide-3-kinase, catalytic, delta polypeptide 545 69 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1806.[MT7]-TVFFESLER.2y4_1.heavy 636.341 / 504.278 10062.0 36.451698303222656 48 20 10 10 8 22.667960156933372 4.411512959599646 0.0 4 0.997938166319243 27.174458981437574 10062.0 31.731340276223452 0.0 - - - - - - - 252.0 20 6 UBA6 ubiquitin-like modifier activating enzyme 6 547 69 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1806.[MT7]-TVFFESLER.2y8_1.heavy 636.341 / 1026.53 10314.0 36.451698303222656 48 20 10 10 8 22.667960156933372 4.411512959599646 0.0 4 0.997938166319243 27.174458981437574 10314.0 31.432625544744777 0.0 - - - - - - - 660.5 20 8 UBA6 ubiquitin-like modifier activating enzyme 6 549 69 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1806.[MT7]-TVFFESLER.2y6_1.heavy 636.341 / 780.389 8301.0 36.451698303222656 48 20 10 10 8 22.667960156933372 4.411512959599646 0.0 4 0.997938166319243 27.174458981437574 8301.0 4.20079522862823 1.0 - - - - - - - 252.0 16 1 UBA6 ubiquitin-like modifier activating enzyme 6 551 69 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1806.[MT7]-TVFFESLER.2y7_1.heavy 636.341 / 927.457 12326.0 36.451698303222656 48 20 10 10 8 22.667960156933372 4.411512959599646 0.0 4 0.997938166319243 27.174458981437574 12326.0 46.069343936381706 1.0 - - - - - - - 252.0 27 6 UBA6 ubiquitin-like modifier activating enzyme 6 553 70 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1678.[MT7]-INEEIER.2b3_1.heavy 523.784 / 501.279 9899.0 22.182600021362305 44 20 8 10 6 7.823794724464377 12.781521438351142 0.0 6 0.99454068166062 16.695344416267826 9899.0 3.97964257293794 4.0 - - - - - - - 483.0 123 1 CUL3 cullin 3 555 70 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1678.[MT7]-INEEIER.2y4_1.heavy 523.784 / 546.288 8933.0 22.182600021362305 44 20 8 10 6 7.823794724464377 12.781521438351142 0.0 6 0.99454068166062 16.695344416267826 8933.0 29.591718426501036 0.0 - - - - - - - 310.14285714285717 17 7 CUL3 cullin 3 557 70 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1678.[MT7]-INEEIER.2b4_1.heavy 523.784 / 630.321 21246.0 22.182600021362305 44 20 8 10 6 7.823794724464377 12.781521438351142 0.0 6 0.99454068166062 16.695344416267826 21246.0 18.129418294295192 0.0 - - - - - - - 422.5 42 8 CUL3 cullin 3 559 70 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1678.[MT7]-INEEIER.2y6_1.heavy 523.784 / 789.374 45390.0 22.182600021362305 44 20 8 10 6 7.823794724464377 12.781521438351142 0.0 6 0.99454068166062 16.695344416267826 45390.0 103.41420678768745 0.0 - - - - - - - 331.75 90 8 CUL3 cullin 3 561 71 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1807.[MT7]-VSLLC[CAM]PLGK[MT7].2y4_1.heavy 637.891 / 558.373 79384.0 34.7484016418457 45 15 10 10 10 2.9563397345094224 33.82561172949701 0.0 3 0.9591755200849041 6.087141086406875 79384.0 77.20042239014242 0.0 - - - - - - - 621.7142857142857 158 7 PIAS1 protein inhibitor of activated STAT, 1 563 71 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1807.[MT7]-VSLLC[CAM]PLGK[MT7].2y8_1.heavy 637.891 / 1031.6 41051.0 34.7484016418457 45 15 10 10 10 2.9563397345094224 33.82561172949701 0.0 3 0.9591755200849041 6.087141086406875 41051.0 169.54894324575324 0.0 - - - - - - - 272.0 82 6 PIAS1 protein inhibitor of activated STAT, 1 565 71 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1807.[MT7]-VSLLC[CAM]PLGK[MT7].2y5_1.heavy 637.891 / 718.404 70412.0 34.7484016418457 45 15 10 10 10 2.9563397345094224 33.82561172949701 0.0 3 0.9591755200849041 6.087141086406875 70412.0 179.96778890903187 0.0 - - - - - - - 660.5714285714286 140 7 PIAS1 protein inhibitor of activated STAT, 1 567 71 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1807.[MT7]-VSLLC[CAM]PLGK[MT7].2y6_1.heavy 637.891 / 831.488 29905.0 34.7484016418457 45 15 10 10 10 2.9563397345094224 33.82561172949701 0.0 3 0.9591755200849041 6.087141086406875 29905.0 73.13355624966178 0.0 - - - - - - - 272.0 59 1 PIAS1 protein inhibitor of activated STAT, 1 569 72 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1705.[MT7]-IDIFPAK[MT7].2y4_1.heavy 546.339 / 606.373 13667.0 33.23149871826172 48 20 10 10 8 6.227738521619633 16.057193097116933 0.0 4 0.9944359695680075 16.537354901707083 13667.0 15.523541440677636 0.0 - - - - - - - 304.0 27 3 PLCG1 phospholipase C, gamma 1 571 72 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1705.[MT7]-IDIFPAK[MT7].2y3_1.heavy 546.339 / 459.305 36749.0 33.23149871826172 48 20 10 10 8 6.227738521619633 16.057193097116933 0.0 4 0.9944359695680075 16.537354901707083 36749.0 32.782859418558346 0.0 - - - - - - - 304.0 73 1 PLCG1 phospholipase C, gamma 1 573 72 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1705.[MT7]-IDIFPAK[MT7].2y6_1.heavy 546.339 / 834.484 6074.0 33.23149871826172 48 20 10 10 8 6.227738521619633 16.057193097116933 0.0 4 0.9944359695680075 16.537354901707083 6074.0 4.803065136471577 2.0 - - - - - - - 780.7142857142857 15 7 PLCG1 phospholipase C, gamma 1 575 72 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1705.[MT7]-IDIFPAK[MT7].2y1_1.heavy 546.339 / 291.215 N/A 33.23149871826172 48 20 10 10 8 6.227738521619633 16.057193097116933 0.0 4 0.9944359695680075 16.537354901707083 9719.0 2.6571936739687003 4.0 - - - - - - - 1215.0 44 2 PLCG1 phospholipase C, gamma 1 577 73 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1679.[MT7]-LEEQLK[MT7].2y4_1.heavy 524.318 / 661.4 17604.0 23.686399459838867 45 15 10 10 10 1.4484552917432107 45.50614863724119 0.0 3 0.9560878763570714 5.8677008644693345 17604.0 52.61217973733583 0.0 - - - - - - - 267.0 35 5 UBA7;GRPEL1;EEA1 ubiquitin-like modifier activating enzyme 7;GrpE-like 1, mitochondrial (E. coli);early endosome antigen 1 579 73 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1679.[MT7]-LEEQLK[MT7].2b3_1.heavy 524.318 / 516.279 17071.0 23.686399459838867 45 15 10 10 10 1.4484552917432107 45.50614863724119 0.0 3 0.9560878763570714 5.8677008644693345 17071.0 23.634052072974647 0.0 - - - - - - - 267.0 34 4 UBA7;GRPEL1;EEA1 ubiquitin-like modifier activating enzyme 7;GrpE-like 1, mitochondrial (E. coli);early endosome antigen 1 581 73 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1679.[MT7]-LEEQLK[MT7].2y5_1.heavy 524.318 / 790.443 38143.0 23.686399459838867 45 15 10 10 10 1.4484552917432107 45.50614863724119 0.0 3 0.9560878763570714 5.8677008644693345 38143.0 61.028800000000004 0.0 - - - - - - - 267.0 76 5 UBA7;GRPEL1;EEA1 ubiquitin-like modifier activating enzyme 7;GrpE-like 1, mitochondrial (E. coli);early endosome antigen 1 583 73 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1679.[MT7]-LEEQLK[MT7].2b4_1.heavy 524.318 / 644.337 16804.0 23.686399459838867 45 15 10 10 10 1.4484552917432107 45.50614863724119 0.0 3 0.9560878763570714 5.8677008644693345 16804.0 34.36022077997436 0.0 - - - - - - - 685.5714285714286 33 7 UBA7;GRPEL1;EEA1 ubiquitin-like modifier activating enzyme 7;GrpE-like 1, mitochondrial (E. coli);early endosome antigen 1 585 74 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1576.[MT7]-ILELGR.2b3_1.heavy 422.772 / 500.32 15000.0 30.41670036315918 44 14 10 10 10 58.986717032785066 1.6952969249741359 0.0 3 0.9402620720759052 5.024018491048106 15000.0 51.04054054054054 0.0 - - - - - - - 333.0 30 4 PIK3CD phosphoinositide-3-kinase, catalytic, delta polypeptide 587 74 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1576.[MT7]-ILELGR.2y4_1.heavy 422.772 / 474.267 15667.0 30.41670036315918 44 14 10 10 10 58.986717032785066 1.6952969249741359 0.0 3 0.9402620720759052 5.024018491048106 15667.0 36.72854505997002 0.0 - - - - - - - 333.0 31 2 PIK3CD phosphoinositide-3-kinase, catalytic, delta polypeptide 589 74 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1576.[MT7]-ILELGR.2y5_1.heavy 422.772 / 587.351 60333.0 30.41670036315918 44 14 10 10 10 58.986717032785066 1.6952969249741359 0.0 3 0.9402620720759052 5.024018491048106 60333.0 356.92495495495496 0.0 - - - - - - - 333.0 120 5 PIK3CD phosphoinositide-3-kinase, catalytic, delta polypeptide 591 74 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1576.[MT7]-ILELGR.2y1_1.heavy 422.772 / 175.119 6667.0 30.41670036315918 44 14 10 10 10 58.986717032785066 1.6952969249741359 0.0 3 0.9402620720759052 5.024018491048106 6667.0 6.801215262565641 3.0 - - - - - - - 333.0 22 3 PIK3CD phosphoinositide-3-kinase, catalytic, delta polypeptide 593 75 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2122.[MT7]-NAEEFTK[MT7].3y3_1.heavy 376.204 / 539.331 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE2L3 ubiquitin-conjugating enzyme E2L 3 595 75 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2122.[MT7]-NAEEFTK[MT7].3b4_1.heavy 376.204 / 588.275 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE2L3 ubiquitin-conjugating enzyme E2L 3 597 75 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2122.[MT7]-NAEEFTK[MT7].3b3_1.heavy 376.204 / 459.232 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE2L3 ubiquitin-conjugating enzyme E2L 3 599 75 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2122.[MT7]-NAEEFTK[MT7].3y2_1.heavy 376.204 / 392.263 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE2L3 ubiquitin-conjugating enzyme E2L 3 601 76 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1577.[MT7]-QDILGR.2b3_1.heavy 423.252 / 501.279 16371.0 22.861099243164062 44 14 10 10 10 2.659521959070102 29.727954740459573 0.0 3 0.9489928247645425 5.441056210660483 16371.0 34.67941891897058 0.0 - - - - - - - 597.0 32 9 NEDD4 neural precursor cell expressed, developmentally down-regulated 4 603 76 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1577.[MT7]-QDILGR.2y4_1.heavy 423.252 / 458.309 33509.0 22.861099243164062 44 14 10 10 10 2.659521959070102 29.727954740459573 0.0 3 0.9489928247645425 5.441056210660483 33509.0 133.9961827580846 0.0 - - - - - - - 256.0 67 8 NEDD4 neural precursor cell expressed, developmentally down-regulated 4 605 76 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1577.[MT7]-QDILGR.2y5_1.heavy 423.252 / 573.336 34020.0 22.861099243164062 44 14 10 10 10 2.659521959070102 29.727954740459573 0.0 3 0.9489928247645425 5.441056210660483 34020.0 57.10127281138763 0.0 - - - - - - - 607.625 68 8 NEDD4 neural precursor cell expressed, developmentally down-regulated 4 607 76 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1577.[MT7]-QDILGR.2b4_1.heavy 423.252 / 614.363 15347.0 22.861099243164062 44 14 10 10 10 2.659521959070102 29.727954740459573 0.0 3 0.9489928247645425 5.441056210660483 15347.0 41.97617340237048 0.0 - - - - - - - 256.0 30 7 NEDD4 neural precursor cell expressed, developmentally down-regulated 4 609 77 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 TPX_ECO57.AQTFTLVAK.2y7.peptide 489.78 / 779.47 720052.0 27.65839958190918 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 720052.0 424.97473923363856 0.0 - - - - - - - 1311.0 1440 1 611 77 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 TPX_ECO57.AQTFTLVAK.2y6.peptide 489.78 / 678.42 330937.0 27.65839958190918 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 330937.0 958.1564309644066 0.0 - - - - - - - 328.0 661 2 613 77 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 TPX_ECO57.AQTFTLVAK.2y5.peptide 489.78 / 531.35 339456.0 27.65839958190918 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 339456.0 601.3235362235346 0.0 - - - - - - - 2667.8571428571427 678 7 615 78 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1707.[MT7]-VLFSLVK[MT7].2b3_1.heavy 547.365 / 504.33 6997.0 37.83679962158203 41 16 10 5 10 2.12095637469356 37.803138977061195 0.04199981689453125 3 0.9633527934938796 6.426975188708321 6997.0 17.91232 0.0 - - - - - - - 399.42857142857144 13 7 CUL7 cullin 7 617 78 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1707.[MT7]-VLFSLVK[MT7].2y4_1.heavy 547.365 / 590.399 13528.0 37.83679962158203 41 16 10 5 10 2.12095637469356 37.803138977061195 0.04199981689453125 3 0.9633527934938796 6.426975188708321 13528.0 53.99587982832618 0.0 - - - - - - - 349.5 27 8 CUL7 cullin 7 619 78 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1707.[MT7]-VLFSLVK[MT7].2y5_1.heavy 547.365 / 737.468 15860.0 37.83679962158203 41 16 10 5 10 2.12095637469356 37.803138977061195 0.04199981689453125 3 0.9633527934938796 6.426975188708321 15860.0 81.12326272258487 0.0 - - - - - - - 310.6666666666667 31 6 CUL7 cullin 7 621 78 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1707.[MT7]-VLFSLVK[MT7].2y6_1.heavy 547.365 / 850.552 13995.0 37.83679962158203 41 16 10 5 10 2.12095637469356 37.803138977061195 0.04199981689453125 3 0.9633527934938796 6.426975188708321 13995.0 88.29463519313305 0.0 - - - - - - - 299.57142857142856 27 7 CUL7 cullin 7 623 79 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1578.[MT7]-SAEQLR.2b3_1.heavy 424.241 / 432.221 3961.0 16.82575035095215 32 15 4 5 8 3.7894877889809027 26.388790667377435 0.047100067138671875 4 0.9558986632586401 5.855006055711823 3961.0 12.963272727272727 0.0 - - - - - - - 330.0 7 8 WEE1 WEE1 homolog (S. pombe) 625 79 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1578.[MT7]-SAEQLR.2y4_1.heavy 424.241 / 545.304 5941.0 16.82575035095215 32 15 4 5 8 3.7894877889809027 26.388790667377435 0.047100067138671875 4 0.9558986632586401 5.855006055711823 5941.0 12.235468971388508 1.0 - - - - - - - 357.5 43 6 WEE1 WEE1 homolog (S. pombe) 627 79 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1578.[MT7]-SAEQLR.2y5_1.heavy 424.241 / 616.341 11552.0 16.82575035095215 32 15 4 5 8 3.7894877889809027 26.388790667377435 0.047100067138671875 4 0.9558986632586401 5.855006055711823 11552.0 12.415287983524989 0.0 - - - - - - - 357.5 23 6 WEE1 WEE1 homolog (S. pombe) 629 79 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1578.[MT7]-SAEQLR.2b4_1.heavy 424.241 / 560.28 6931.0 16.82575035095215 32 15 4 5 8 3.7894877889809027 26.388790667377435 0.047100067138671875 4 0.9558986632586401 5.855006055711823 6931.0 20.372939393939394 0.0 - - - - - - - 440.0 17 6 WEE1 WEE1 homolog (S. pombe) 631 80 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2125.[MT7]-ASPAK[MT7].2y4_1.heavy 381.242 / 546.337 27056.0 13.47106647491455 29 16 2 7 4 3.152144670855774 23.736292126312918 0.02360057830810547 7 0.9607375213176826 6.207864316864557 27056.0 84.13887299813923 0.0 - - - - - - - 289.0 54 10 TRIM32 tripartite motif-containing 32 633 80 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2125.[MT7]-ASPAK[MT7].2b4_1.heavy 381.242 / 471.268 2146.0 13.47106647491455 29 16 2 7 4 3.152144670855774 23.736292126312918 0.02360057830810547 7 0.9607375213176826 6.207864316864557 2146.0 -0.03357142857142881 6.0 - - - - - - - 293.2857142857143 10 7 TRIM32 tripartite motif-containing 32 635 80 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2125.[MT7]-ASPAK[MT7].2y3_1.heavy 381.242 / 459.305 22858.0 13.47106647491455 29 16 2 7 4 3.152144670855774 23.736292126312918 0.02360057830810547 7 0.9607375213176826 6.207864316864557 22858.0 38.64790460878885 0.0 - - - - - - - 666.4285714285714 45 7 TRIM32 tripartite motif-containing 32 637 80 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2125.[MT7]-ASPAK[MT7].2y1_1.heavy 381.242 / 291.215 N/A 13.47106647491455 29 16 2 7 4 3.152144670855774 23.736292126312918 0.02360057830810547 7 0.9607375213176826 6.207864316864557 9330.0 3.011503458318165 10.0 - - - - - - - 2332.0 122 1 TRIM32 tripartite motif-containing 32 639 81 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1708.[MT7]-IC[CAM]DFGLAR.2b3_1.heavy 548.291 / 533.251 34460.0 31.100200653076172 45 15 10 10 10 2.137699250402153 37.24571027471159 0.0 3 0.9507691107922787 5.53918029703855 34460.0 26.834063724332104 0.0 - - - - - - - 331.0 68 4 FLT1;FLT3;FLT4;KDR;KIT;PDGFRA;PDGFRB;NLK;MAPK1;MAPK3 fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor);fms-related tyrosine kinase 3;fms-related tyrosine kinase 4;kinase insert domain receptor (a type III receptor tyrosine kinase);v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog;platelet-derived growth factor receptor, alpha polypeptide;platelet-derived growth factor receptor, beta polypeptide;nemo-like kinase;mitogen-activated protein kinase 1;mitogen-activated protein kinase 3 641 81 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1708.[MT7]-IC[CAM]DFGLAR.2y5_1.heavy 548.291 / 563.33 51027.0 31.100200653076172 45 15 10 10 10 2.137699250402153 37.24571027471159 0.0 3 0.9507691107922787 5.53918029703855 51027.0 104.29431080811695 0.0 - - - - - - - 331.0 102 6 FLT1;FLT3;FLT4;KDR;KIT;PDGFRA;PDGFRB;NLK;MAPK1;MAPK3 fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor);fms-related tyrosine kinase 3;fms-related tyrosine kinase 4;kinase insert domain receptor (a type III receptor tyrosine kinase);v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog;platelet-derived growth factor receptor, alpha polypeptide;platelet-derived growth factor receptor, beta polypeptide;nemo-like kinase;mitogen-activated protein kinase 1;mitogen-activated protein kinase 3 643 81 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1708.[MT7]-IC[CAM]DFGLAR.2b5_1.heavy 548.291 / 737.341 15573.0 31.100200653076172 45 15 10 10 10 2.137699250402153 37.24571027471159 0.0 3 0.9507691107922787 5.53918029703855 15573.0 13.919535705235475 3.0 - - - - - - - 331.0 77 3 FLT1;FLT3;FLT4;KDR;KIT;PDGFRA;PDGFRB;NLK;MAPK1;MAPK3 fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor);fms-related tyrosine kinase 3;fms-related tyrosine kinase 4;kinase insert domain receptor (a type III receptor tyrosine kinase);v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog;platelet-derived growth factor receptor, alpha polypeptide;platelet-derived growth factor receptor, beta polypeptide;nemo-like kinase;mitogen-activated protein kinase 1;mitogen-activated protein kinase 3 645 81 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1708.[MT7]-IC[CAM]DFGLAR.2y7_1.heavy 548.291 / 838.388 60636.0 31.100200653076172 45 15 10 10 10 2.137699250402153 37.24571027471159 0.0 3 0.9507691107922787 5.53918029703855 60636.0 214.75851993387676 0.0 - - - - - - - 331.0 121 3 FLT1;FLT3;FLT4;KDR;KIT;PDGFRA;PDGFRB;NLK;MAPK1;MAPK3 fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor);fms-related tyrosine kinase 3;fms-related tyrosine kinase 4;kinase insert domain receptor (a type III receptor tyrosine kinase);v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog;platelet-derived growth factor receptor, alpha polypeptide;platelet-derived growth factor receptor, beta polypeptide;nemo-like kinase;mitogen-activated protein kinase 1;mitogen-activated protein kinase 3 647 82 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1579.[MT7]-EAAEER.2y4_1.heavy 424.715 / 504.241 5670.0 13.014900207519531 45 15 10 10 10 2.8365822561406993 27.426020294297935 0.0 3 0.9574921853540426 5.964546656817098 5670.0 31.280362925576917 1.0 - - - - - - - 187.52 11 25 TRIM32 tripartite motif-containing 32 649 82 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1579.[MT7]-EAAEER.2y5_1.heavy 424.715 / 575.278 32581.0 13.014900207519531 45 15 10 10 10 2.8365822561406993 27.426020294297935 0.0 3 0.9574921853540426 5.964546656817098 32581.0 15.328855171698304 0.0 - - - - - - - 253.85714285714286 65 28 TRIM32 tripartite motif-containing 32 651 82 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1579.[MT7]-EAAEER.2b4_1.heavy 424.715 / 545.269 37646.0 13.014900207519531 45 15 10 10 10 2.8365822561406993 27.426020294297935 0.0 3 0.9574921853540426 5.964546656817098 37646.0 78.05516309844188 0.0 - - - - - - - 213.7391304347826 75 23 TRIM32 tripartite motif-containing 32 653 82 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1579.[MT7]-EAAEER.2b5_1.heavy 424.715 / 674.311 12776.0 13.014900207519531 45 15 10 10 10 2.8365822561406993 27.426020294297935 0.0 3 0.9574921853540426 5.964546656817098 12776.0 25.331523646557685 0.0 - - - - - - - 261.7307692307692 25 26 TRIM32 tripartite motif-containing 32 655 83 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1572.[MT7]-AEAEK[MT7].2y4_1.heavy 418.242 / 620.337 875.0 15.313400268554688 34 8 10 10 6 1.3741464881349326 55.823377052518296 0.0 5 0.7947341130565188 2.6759539513801425 875.0 0.7872750642673522 22.0 - - - - - - - 712.6666666666666 84 9 CCDC85A;GBP5;FAM186A;FEN1;FAM21C;FAM21A;ELFN1;TRAPPC4;UBE2R2;FAM21B;MRPL12;TOP2A;C5orf30 coiled-coil domain containing 85A;guanylate binding protein 5;family with sequence similarity 186, member A;flap structure-specific endonuclease 1;family with sequence similarity 21, member C;family with sequence similarity 21, member A;extracellular leucine-rich repeat and fibronectin type III domain containing 1;trafficking protein particle complex 4;ubiquitin-conjugating enzyme E2R 2;family with sequence similarity 21, member B;mitochondrial ribosomal protein L12;topoisomerase (DNA) II alpha 170kDa;chromosome 5 open reading frame 30 657 83 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1572.[MT7]-AEAEK[MT7].2b4_1.heavy 418.242 / 545.269 10788.0 15.313400268554688 34 8 10 10 6 1.3741464881349326 55.823377052518296 0.0 5 0.7947341130565188 2.6759539513801425 10788.0 10.565076926934502 2.0 - - - - - - - 324.0 24 9 CCDC85A;GBP5;FAM186A;FEN1;FAM21C;FAM21A;ELFN1;TRAPPC4;UBE2R2;FAM21B;MRPL12;TOP2A;C5orf30 coiled-coil domain containing 85A;guanylate binding protein 5;family with sequence similarity 186, member A;flap structure-specific endonuclease 1;family with sequence similarity 21, member C;family with sequence similarity 21, member A;extracellular leucine-rich repeat and fibronectin type III domain containing 1;trafficking protein particle complex 4;ubiquitin-conjugating enzyme E2R 2;family with sequence similarity 21, member B;mitochondrial ribosomal protein L12;topoisomerase (DNA) II alpha 170kDa;chromosome 5 open reading frame 30 659 83 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1572.[MT7]-AEAEK[MT7].2y3_1.heavy 418.242 / 491.295 55594.0 15.313400268554688 34 8 10 10 6 1.3741464881349326 55.823377052518296 0.0 5 0.7947341130565188 2.6759539513801425 55594.0 79.1425416562167 0.0 - - - - - - - 736.0 111 7 CCDC85A;GBP5;FAM186A;FEN1;FAM21C;FAM21A;ELFN1;TRAPPC4;UBE2R2;FAM21B;MRPL12;TOP2A;C5orf30 coiled-coil domain containing 85A;guanylate binding protein 5;family with sequence similarity 186, member A;flap structure-specific endonuclease 1;family with sequence similarity 21, member C;family with sequence similarity 21, member A;extracellular leucine-rich repeat and fibronectin type III domain containing 1;trafficking protein particle complex 4;ubiquitin-conjugating enzyme E2R 2;family with sequence similarity 21, member B;mitochondrial ribosomal protein L12;topoisomerase (DNA) II alpha 170kDa;chromosome 5 open reading frame 30 661 83 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1572.[MT7]-AEAEK[MT7].2y1_1.heavy 418.242 / 291.215 31393.0 15.313400268554688 34 8 10 10 6 1.3741464881349326 55.823377052518296 0.0 5 0.7947341130565188 2.6759539513801425 31393.0 10.799617019242163 0.0 - - - - - - - 308.0 62 6 CCDC85A;GBP5;FAM186A;FEN1;FAM21C;FAM21A;ELFN1;TRAPPC4;UBE2R2;FAM21B;MRPL12;TOP2A;C5orf30 coiled-coil domain containing 85A;guanylate binding protein 5;family with sequence similarity 186, member A;flap structure-specific endonuclease 1;family with sequence similarity 21, member C;family with sequence similarity 21, member A;extracellular leucine-rich repeat and fibronectin type III domain containing 1;trafficking protein particle complex 4;ubiquitin-conjugating enzyme E2R 2;family with sequence similarity 21, member B;mitochondrial ribosomal protein L12;topoisomerase (DNA) II alpha 170kDa;chromosome 5 open reading frame 30 663 84 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1702.[MT7]-EDVNEAIR.2b6_1.heavy 545.286 / 802.37 16988.0 20.62929916381836 47 17 10 10 10 2.6555065945829104 30.073049194631658 0.0 3 0.9763266813484461 8.005201884309852 16988.0 53.992868217054266 0.0 - - - - - - - 293.1818181818182 33 11 MCM7 minichromosome maintenance complex component 7 665 84 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1702.[MT7]-EDVNEAIR.2y6_1.heavy 545.286 / 701.394 20213.0 20.62929916381836 47 17 10 10 10 2.6555065945829104 30.073049194631658 0.0 3 0.9763266813484461 8.005201884309852 20213.0 27.532657807308972 0.0 - - - - - - - 322.5 40 6 MCM7 minichromosome maintenance complex component 7 667 84 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1702.[MT7]-EDVNEAIR.2b5_1.heavy 545.286 / 731.333 19138.0 20.62929916381836 47 17 10 10 10 2.6555065945829104 30.073049194631658 0.0 3 0.9763266813484461 8.005201884309852 19138.0 29.37460465116279 0.0 - - - - - - - 276.42857142857144 38 7 MCM7 minichromosome maintenance complex component 7 669 84 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1702.[MT7]-EDVNEAIR.2y7_1.heavy 545.286 / 816.421 29890.0 20.62929916381836 47 17 10 10 10 2.6555065945829104 30.073049194631658 0.0 3 0.9763266813484461 8.005201884309852 29890.0 36.493604651162784 0.0 - - - - - - - 286.6666666666667 59 3 MCM7 minichromosome maintenance complex component 7 671 85 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1573.[MT7]-ISDDSR.2b3_1.heavy 418.715 / 460.252 8516.0 15.725599765777588 33 12 10 5 6 1.8864885315137625 53.00853852514951 0.04139995574951172 6 0.8849388882757472 3.6028248493102595 8516.0 8.225382892364784 0.0 - - - - - - - 293.625 17 8 RFWD2 ring finger and WD repeat domain 2 673 85 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1573.[MT7]-ISDDSR.2y5_1.heavy 418.715 / 579.237 8516.0 15.725599765777588 33 12 10 5 6 1.8864885315137625 53.00853852514951 0.04139995574951172 6 0.8849388882757472 3.6028248493102595 8516.0 10.386462533065819 4.0 - - - - - - - 147.0 42 3 RFWD2 ring finger and WD repeat domain 2 675 85 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1573.[MT7]-ISDDSR.2b4_1.heavy 418.715 / 575.279 39496.0 15.725599765777588 33 12 10 5 6 1.8864885315137625 53.00853852514951 0.04139995574951172 6 0.8849388882757472 3.6028248493102595 39496.0 80.04927598192714 0.0 - - - - - - - 776.0 78 7 RFWD2 ring finger and WD repeat domain 2 677 85 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1573.[MT7]-ISDDSR.2b5_1.heavy 418.715 / 662.311 5726.0 15.725599765777588 33 12 10 5 6 1.8864885315137625 53.00853852514951 0.04139995574951172 6 0.8849388882757472 3.6028248493102595 5726.0 15.611932205138789 0.0 - - - - - - - 320.27272727272725 11 11 RFWD2 ring finger and WD repeat domain 2 679 86 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1703.[MT7]-LGGGPSDAK[MT7].2y8_1.heavy 545.311 / 832.428 15407.0 18.580900192260742 48 18 10 10 10 7.146936770969036 13.992008493233282 0.0 3 0.9805666506809348 8.838584239404854 15407.0 47.88551534031908 0.0 - - - - - - - 313.0 30 8 AKT2 v-akt murine thymoma viral oncogene homolog 2 681 86 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1703.[MT7]-LGGGPSDAK[MT7].2y5_1.heavy 545.311 / 661.364 3467.0 18.580900192260742 48 18 10 10 10 7.146936770969036 13.992008493233282 0.0 3 0.9805666506809348 8.838584239404854 3467.0 24.628974497005586 0.0 - - - - - - - 289.0 6 6 AKT2 v-akt murine thymoma viral oncogene homolog 2 683 86 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1703.[MT7]-LGGGPSDAK[MT7].2y6_1.heavy 545.311 / 718.385 2696.0 18.580900192260742 48 18 10 10 10 7.146936770969036 13.992008493233282 0.0 3 0.9805666506809348 8.838584239404854 2696.0 12.954805194805193 1.0 - - - - - - - 257.0 5 9 AKT2 v-akt murine thymoma viral oncogene homolog 2 685 86 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1703.[MT7]-LGGGPSDAK[MT7].2b7_1.heavy 545.311 / 728.37 19067.0 18.580900192260742 48 18 10 10 10 7.146936770969036 13.992008493233282 0.0 3 0.9805666506809348 8.838584239404854 19067.0 126.17782186205783 0.0 - - - - - - - 269.8 38 5 AKT2 v-akt murine thymoma viral oncogene homolog 2 687 87 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1574.[MT7]-GLAYLR.2b3_1.heavy 418.759 / 386.252 35851.0 27.979999542236328 39 9 10 10 10 0.8888981840861419 73.62236565948324 0.0 3 0.8075684148778012 2.766943255621173 35851.0 13.818282628752176 1.0 - - - - - - - 329.0 72 2 KCNJ13;MAP2K2 potassium inwardly-rectifying channel, subfamily J, member 13;mitogen-activated protein kinase kinase 2 689 87 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1574.[MT7]-GLAYLR.2y4_1.heavy 418.759 / 522.304 28615.0 27.979999542236328 39 9 10 10 10 0.8888981840861419 73.62236565948324 0.0 3 0.8075684148778012 2.766943255621173 28615.0 170.4723404255319 0.0 - - - - - - - 329.0 57 3 KCNJ13;MAP2K2 potassium inwardly-rectifying channel, subfamily J, member 13;mitogen-activated protein kinase kinase 2 691 87 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1574.[MT7]-GLAYLR.2y5_1.heavy 418.759 / 635.388 34535.0 27.979999542236328 39 9 10 10 10 0.8888981840861419 73.62236565948324 0.0 3 0.8075684148778012 2.766943255621173 34535.0 155.35501519756838 0.0 - - - - - - - 329.0 69 1 KCNJ13;MAP2K2 potassium inwardly-rectifying channel, subfamily J, member 13;mitogen-activated protein kinase kinase 2 693 87 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1574.[MT7]-GLAYLR.2b4_1.heavy 418.759 / 549.315 71702.0 27.979999542236328 39 9 10 10 10 0.8888981840861419 73.62236565948324 0.0 3 0.8075684148778012 2.766943255621173 71702.0 128.04943301690506 0.0 - - - - - - - 752.0 143 7 KCNJ13;MAP2K2 potassium inwardly-rectifying channel, subfamily J, member 13;mitogen-activated protein kinase kinase 2 695 88 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1704.[MT7]-QQLVVSK[MT7].2y4_1.heavy 545.347 / 576.384 23556.0 21.701099395751953 48 18 10 10 10 3.0166191071486796 26.457500494115017 0.0 3 0.9807930138808982 8.890683984871172 23556.0 53.00911529627929 0.0 - - - - - - - 733.2857142857143 47 7 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 697 88 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1704.[MT7]-QQLVVSK[MT7].2b3_1.heavy 545.347 / 514.311 19824.0 21.701099395751953 48 18 10 10 10 3.0166191071486796 26.457500494115017 0.0 3 0.9807930138808982 8.890683984871172 19824.0 35.05852090032154 0.0 - - - - - - - 816.5 39 8 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 699 88 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1704.[MT7]-QQLVVSK[MT7].2y5_1.heavy 545.347 / 689.468 14926.0 21.701099395751953 48 18 10 10 10 3.0166191071486796 26.457500494115017 0.0 3 0.9807930138808982 8.890683984871172 14926.0 28.81919293330425 0.0 - - - - - - - 360.09090909090907 29 11 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 701 88 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1704.[MT7]-QQLVVSK[MT7].2b4_1.heavy 545.347 / 613.379 15393.0 21.701099395751953 48 18 10 10 10 3.0166191071486796 26.457500494115017 0.0 3 0.9807930138808982 8.890683984871172 15393.0 67.13556437768239 0.0 - - - - - - - 336.55555555555554 30 9 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 703 89 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1575.[MT7]-VAFTTR.2y4_1.heavy 419.749 / 524.283 24446.0 23.43670082092285 44 14 10 10 10 2.571334049900523 38.890318433681806 0.0 3 0.9422741478540676 5.111702344239663 24446.0 6.564718090626082 1.0 - - - - - - - 263.0 48 3 UBE2D2;UBE2D3 ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast);ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) 705 89 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1575.[MT7]-VAFTTR.2b3_1.heavy 419.749 / 462.283 21292.0 23.43670082092285 44 14 10 10 10 2.571334049900523 38.890318433681806 0.0 3 0.9422741478540676 5.111702344239663 21292.0 74.48152091254754 0.0 - - - - - - - 591.75 42 8 UBE2D2;UBE2D3 ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast);ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) 707 89 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1575.[MT7]-VAFTTR.2y5_1.heavy 419.749 / 595.32 203453.0 23.43670082092285 44 14 10 10 10 2.571334049900523 38.890318433681806 0.0 3 0.9422741478540676 5.111702344239663 203453.0 757.483593080559 0.0 - - - - - - - 263.0 406 2 UBE2D2;UBE2D3 ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast);ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) 709 89 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1575.[MT7]-VAFTTR.2y1_1.heavy 419.749 / 175.119 40480.0 23.43670082092285 44 14 10 10 10 2.571334049900523 38.890318433681806 0.0 3 0.9422741478540676 5.111702344239663 40480.0 24.455234867488265 1.0 - - - - - - - 263.0 85 1 UBE2D2;UBE2D3 ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast);ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) 711 90 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1957.[MT7]-TLDNVAIVEEEK[MT7].3b6_1.heavy 549.973 / 758.417 27667.0 29.145599365234375 44 14 10 10 10 2.215066594634608 45.14536955332296 0.0 3 0.9304782349964185 4.653215870563909 27667.0 40.642823 0.0 - - - - - - - 333.0 55 2 UBE2O ubiquitin-conjugating enzyme E2O 713 90 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1957.[MT7]-TLDNVAIVEEEK[MT7].3b4_1.heavy 549.973 / 588.311 28000.0 29.145599365234375 44 14 10 10 10 2.215066594634608 45.14536955332296 0.0 3 0.9304782349964185 4.653215870563909 28000.0 86.95728733448408 0.0 - - - - - - - 333.0 56 6 UBE2O ubiquitin-conjugating enzyme E2O 715 90 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1957.[MT7]-TLDNVAIVEEEK[MT7].3b5_1.heavy 549.973 / 687.379 20000.0 29.145599365234375 44 14 10 10 10 2.215066594634608 45.14536955332296 0.0 3 0.9304782349964185 4.653215870563909 20000.0 37.7843471785403 0.0 - - - - - - - 667.0 40 7 UBE2O ubiquitin-conjugating enzyme E2O 717 90 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1957.[MT7]-TLDNVAIVEEEK[MT7].3y4_1.heavy 549.973 / 678.343 22333.0 29.145599365234375 44 14 10 10 10 2.215066594634608 45.14536955332296 0.0 3 0.9304782349964185 4.653215870563909 22333.0 85.82444474474475 0.0 - - - - - - - 333.0 44 4 UBE2O ubiquitin-conjugating enzyme E2O 719 91 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2359.[MT7]-EIFNFVLK[MT7].2b3_1.heavy 649.392 / 534.304 7169.0 40.118900299072266 47 17 10 10 10 2.737045906258102 29.02350597252091 0.0 3 0.9771751920082454 8.153221995172256 7169.0 10.957484509261413 1.0 - - - - - - - 281.875 21 8 PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 721 91 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2359.[MT7]-EIFNFVLK[MT7].2b4_1.heavy 649.392 / 648.347 13928.0 40.118900299072266 47 17 10 10 10 2.737045906258102 29.02350597252091 0.0 3 0.9771751920082454 8.153221995172256 13928.0 36.74177295740814 0.0 - - - - - - - 672.5714285714286 27 7 PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 723 91 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2359.[MT7]-EIFNFVLK[MT7].2y3_1.heavy 649.392 / 503.367 15771.0 40.118900299072266 47 17 10 10 10 2.737045906258102 29.02350597252091 0.0 3 0.9771751920082454 8.153221995172256 15771.0 41.9244040758373 0.0 - - - - - - - 701.8571428571429 31 7 PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 725 91 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2359.[MT7]-EIFNFVLK[MT7].2y6_1.heavy 649.392 / 911.547 19868.0 40.118900299072266 47 17 10 10 10 2.737045906258102 29.02350597252091 0.0 3 0.9771751920082454 8.153221995172256 19868.0 68.1117569909765 0.0 - - - - - - - 322.14285714285717 39 7 PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 727 92 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1956.[MT7]-ADAIFQEGIQQK[MT7].2y8_1.heavy 818.451 / 1121.61 7333.0 29.6882004737854 40 15 10 5 10 2.073966917977156 37.71621593153837 0.04960060119628906 3 0.9555666355845269 5.832925249848968 7333.0 33.01502401952177 0.0 - - - - - - - 333.0 14 1 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 729 92 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1956.[MT7]-ADAIFQEGIQQK[MT7].2y5_1.heavy 818.451 / 717.438 6667.0 29.6882004737854 40 15 10 5 10 2.073966917977156 37.71621593153837 0.04960060119628906 3 0.9555666355845269 5.832925249848968 6667.0 15.729522068965517 0.0 - - - - - - - 333.0 13 6 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 731 92 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1956.[MT7]-ADAIFQEGIQQK[MT7].2b4_1.heavy 818.451 / 515.295 15000.0 29.6882004737854 40 15 10 5 10 2.073966917977156 37.71621593153837 0.04960060119628906 3 0.9555666355845269 5.832925249848968 15000.0 57.19234234234234 0.0 - - - - - - - 333.0 30 2 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 733 92 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1956.[MT7]-ADAIFQEGIQQK[MT7].2y6_1.heavy 818.451 / 846.48 1667.0 29.6882004737854 40 15 10 5 10 2.073966917977156 37.71621593153837 0.04960060119628906 3 0.9555666355845269 5.832925249848968 1667.0 2.9969761807018473 2.0 - - - - - - - 333.0 3 3 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 735 93 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1955.[MT7]-LRYPVTPELLER.3y7_1.heavy 543.986 / 857.473 7498.0 32.849998474121094 44 14 10 10 10 2.8871869046267244 34.63579023573075 0.0 3 0.9450116131284967 5.238614150675808 7498.0 34.346607692307686 0.0 - - - - - - - 312.0 14 6 PLCG2 phospholipase C, gamma 2 (phosphatidylinositol-specific) 737 93 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1955.[MT7]-LRYPVTPELLER.3y6_1.heavy 543.986 / 756.425 17808.0 32.849998474121094 44 14 10 10 10 2.8871869046267244 34.63579023573075 0.0 3 0.9450116131284967 5.238614150675808 17808.0 75.64507560955587 0.0 - - - - - - - 312.0 35 4 PLCG2 phospholipase C, gamma 2 (phosphatidylinositol-specific) 739 93 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1955.[MT7]-LRYPVTPELLER.3y4_1.heavy 543.986 / 530.33 13434.0 32.849998474121094 44 14 10 10 10 2.8871869046267244 34.63579023573075 0.0 3 0.9450116131284967 5.238614150675808 13434.0 24.289436381223325 0.0 - - - - - - - 312.0 26 4 PLCG2 phospholipase C, gamma 2 (phosphatidylinositol-specific) 741 93 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1955.[MT7]-LRYPVTPELLER.3y5_1.heavy 543.986 / 659.372 12809.0 32.849998474121094 44 14 10 10 10 2.8871869046267244 34.63579023573075 0.0 3 0.9450116131284967 5.238614150675808 12809.0 48.98146457597898 0.0 - - - - - - - 312.0 25 2 PLCG2 phospholipase C, gamma 2 (phosphatidylinositol-specific) 743 94 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2357.[MT7]-EDILEFIK[MT7].2y4_1.heavy 647.878 / 680.41 25327.0 39.18360137939453 48 18 10 10 10 6.814570429797839 14.674439281269061 0.0 3 0.9899210263155187 12.282556426826845 25327.0 60.16612214615126 0.0 - - - - - - - 322.0 50 6 CUL5 cullin 5 745 94 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2357.[MT7]-EDILEFIK[MT7].2b3_1.heavy 647.878 / 502.263 33912.0 39.18360137939453 48 18 10 10 10 6.814570429797839 14.674439281269061 0.0 3 0.9899210263155187 12.282556426826845 33912.0 26.02895353312389 0.0 - - - - - - - 751.5 67 8 CUL5 cullin 5 747 94 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2357.[MT7]-EDILEFIK[MT7].2y3_1.heavy 647.878 / 551.367 30263.0 39.18360137939453 48 18 10 10 10 6.814570429797839 14.674439281269061 0.0 3 0.9899210263155187 12.282556426826845 30263.0 70.64931749254329 0.0 - - - - - - - 295.25 60 8 CUL5 cullin 5 749 94 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2357.[MT7]-EDILEFIK[MT7].2b5_1.heavy 647.878 / 744.39 22322.0 39.18360137939453 48 18 10 10 10 6.814570429797839 14.674439281269061 0.0 3 0.9899210263155187 12.282556426826845 22322.0 30.507280336665644 0.0 - - - - - - - 286.3333333333333 44 6 CUL5 cullin 5 751 95 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1954.[MT7]-TERPRPNTFVIR.4y4_1.heavy 408.238 / 534.34 15983.0 23.109399795532227 40 10 10 10 10 0.9571779697533265 64.61547469372687 0.0 3 0.8379453261174922 3.023320344638182 15983.0 21.889092331450165 1.0 - - - - - - - 254.0 31 4 AKT2 v-akt murine thymoma viral oncogene homolog 2 753 95 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1954.[MT7]-TERPRPNTFVIR.4y9_2.heavy 408.238 / 550.322 19789.0 23.109399795532227 40 10 10 10 10 0.9571779697533265 64.61547469372687 0.0 3 0.8379453261174922 3.023320344638182 19789.0 39.52086818614346 0.0 - - - - - - - 254.0 39 1 AKT2 v-akt murine thymoma viral oncogene homolog 2 755 95 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1954.[MT7]-TERPRPNTFVIR.4y7_1.heavy 408.238 / 846.483 1015.0 23.109399795532227 40 10 10 10 10 0.9571779697533265 64.61547469372687 0.0 3 0.8379453261174922 3.023320344638182 1015.0 -0.0 0.0 - - - - - - - 254.0 2 2 AKT2 v-akt murine thymoma viral oncogene homolog 2 757 95 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1954.[MT7]-TERPRPNTFVIR.4b3_1.heavy 408.238 / 531.301 11670.0 23.109399795532227 40 10 10 10 10 0.9571779697533265 64.61547469372687 0.0 3 0.8379453261174922 3.023320344638182 11670.0 10.034288961881346 0.0 - - - - - - - 602.25 23 8 AKT2 v-akt murine thymoma viral oncogene homolog 2 759 96 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2358.[MT7]-LFMLLLEK[MT7].2y4_1.heavy 647.906 / 646.426 36268.0 46.28770065307617 47 17 10 10 10 2.055330505660685 34.2260030032132 0.0 3 0.9741787899232578 7.663640394792914 36268.0 433.2938928030394 0.0 - - - - - - - 304.3333333333333 72 9 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 761 96 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2358.[MT7]-LFMLLLEK[MT7].2b3_1.heavy 647.906 / 536.302 29233.0 46.28770065307617 47 17 10 10 10 2.055330505660685 34.2260030032132 0.0 3 0.9741787899232578 7.663640394792914 29233.0 64.44328918786351 0.0 - - - - - - - 224.27272727272728 58 11 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 763 96 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2358.[MT7]-LFMLLLEK[MT7].2y5_1.heavy 647.906 / 759.51 22930.0 46.28770065307617 47 17 10 10 10 2.055330505660685 34.2260030032132 0.0 3 0.9741787899232578 7.663640394792914 22930.0 80.74068526480684 0.0 - - - - - - - 209.9 45 10 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 765 96 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2358.[MT7]-LFMLLLEK[MT7].2y3_1.heavy 647.906 / 533.341 33527.0 46.28770065307617 47 17 10 10 10 2.055330505660685 34.2260030032132 0.0 3 0.9741787899232578 7.663640394792914 33527.0 106.39210922061159 0.0 - - - - - - - 251.08333333333334 67 12 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 767 97 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1571.[MT7]-QFADPGALQR.3y6_1.heavy 416.227 / 641.373 3745.0 24.89324951171875 25 12 2 5 6 2.016936626529644 38.43899331769987 0.04180145263671875 6 0.8808834682594474 3.53971274259494 3745.0 8.400243055555555 3.0 - - - - - - - 288.0 9 1 ZBTB17 zinc finger and BTB domain containing 17 769 97 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1571.[MT7]-QFADPGALQR.3b1_1.heavy 416.227 / 273.168 3169.0 24.89324951171875 25 12 2 5 6 2.016936626529644 38.43899331769987 0.04180145263671875 6 0.8808834682594474 3.53971274259494 3169.0 2.4207638888888887 2.0 - - - - - - - 288.0 6 3 ZBTB17 zinc finger and BTB domain containing 17 771 97 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1571.[MT7]-QFADPGALQR.3b4_1.heavy 416.227 / 606.3 10082.0 24.89324951171875 25 12 2 5 6 2.016936626529644 38.43899331769987 0.04180145263671875 6 0.8808834682594474 3.53971274259494 10082.0 32.20638888888889 0.0 - - - - - - - 288.0 20 3 ZBTB17 zinc finger and BTB domain containing 17 773 97 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1571.[MT7]-QFADPGALQR.3y5_1.heavy 416.227 / 544.32 6913.0 24.89324951171875 25 12 2 5 6 2.016936626529644 38.43899331769987 0.04180145263671875 6 0.8808834682594474 3.53971274259494 6913.0 16.802430555555556 2.0 - - - - - - - 288.0 58 9 ZBTB17 zinc finger and BTB domain containing 17 775 98 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1570.[MT7]-ENLPGR.2y4_1.heavy 415.236 / 442.277 N/A 18.11750030517578 26 12 0 10 4 0.913105553702187 63.680440041072416 0.0 10 0.8851989019385824 3.6069841838398573 3500.0 5.941727375841484 3.0 - - - - - - - 265.77777777777777 1120 9 STAT5B;ZNF665 signal transducer and activator of transcription 5B;zinc finger protein 665 777 98 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1570.[MT7]-ENLPGR.2b3_1.heavy 415.236 / 501.279 8105.0 18.11750030517578 26 12 0 10 4 0.913105553702187 63.680440041072416 0.0 10 0.8851989019385824 3.6069841838398573 8105.0 22.867731120087136 0.0 - - - - - - - 245.33333333333334 16 6 STAT5B;ZNF665 signal transducer and activator of transcription 5B;zinc finger protein 665 779 98 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1570.[MT7]-ENLPGR.2y5_1.heavy 415.236 / 556.32 10132.0 18.11750030517578 26 12 0 10 4 0.913105553702187 63.680440041072416 0.0 10 0.8851989019385824 3.6069841838398573 10132.0 22.72244718467314 0.0 - - - - - - - 614.3333333333334 20 9 STAT5B;ZNF665 signal transducer and activator of transcription 5B;zinc finger protein 665 781 98 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1570.[MT7]-ENLPGR.2y1_1.heavy 415.236 / 175.119 4053.0 18.11750030517578 26 12 0 10 4 0.913105553702187 63.680440041072416 0.0 10 0.8851989019385824 3.6069841838398573 4053.0 1.1886469183824118 12.0 - - - - - - - 921.0 15 1 STAT5B;ZNF665 signal transducer and activator of transcription 5B;zinc finger protein 665 783 99 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1958.[MT7]-LGEAFDSQLVIGVR.2b7_1.heavy 824.463 / 864.422 4847.0 46.469075202941895 37 12 10 5 10 0.973570797091513 65.49735363907763 0.042697906494140625 3 0.8901843549663295 3.6895497692558763 4847.0 17.677294117647058 0.0 - - - - - - - 255.0 9 15 CUL5 cullin 5 785 99 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1958.[MT7]-LGEAFDSQLVIGVR.2b6_1.heavy 824.463 / 777.39 1786.0 46.469075202941895 37 12 10 5 10 0.973570797091513 65.49735363907763 0.042697906494140625 3 0.8901843549663295 3.6895497692558763 1786.0 8.591477124183008 0.0 - - - - - - - 198.33333333333334 3 15 CUL5 cullin 5 787 99 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1958.[MT7]-LGEAFDSQLVIGVR.2y7_1.heavy 824.463 / 784.504 3401.0 46.469075202941895 37 12 10 5 10 0.973570797091513 65.49735363907763 0.042697906494140625 3 0.8901843549663295 3.6895497692558763 3401.0 7.08779831932773 0.0 - - - - - - - 209.23076923076923 6 13 CUL5 cullin 5 789 99 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1958.[MT7]-LGEAFDSQLVIGVR.2y1_1.heavy 824.463 / 175.119 1020.0 46.469075202941895 37 12 10 5 10 0.973570797091513 65.49735363907763 0.042697906494140625 3 0.8901843549663295 3.6895497692558763 1020.0 2.095238095238095 9.0 - - - - - - - 221.0 2 15 CUL5 cullin 5 791 100 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2452.[MT7]-GAVPLEMLEIALR.2y8_1.heavy 778.454 / 974.534 5099.0 47.837799072265625 50 20 10 10 10 16.18584340022597 6.178238447469714 0.0 3 0.9992816296679468 46.04284739845394 5099.0 99.94867304070694 0.0 - - - - - - - 100.17647058823529 10 17 TTK TTK protein kinase 793 100 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2452.[MT7]-GAVPLEMLEIALR.2y9_1.heavy 778.454 / 1087.62 3751.0 47.837799072265625 50 20 10 10 10 16.18584340022597 6.178238447469714 0.0 3 0.9992816296679468 46.04284739845394 3751.0 71.5395788742986 0.0 - - - - - - - 144.30769230769232 7 13 TTK TTK protein kinase 795 100 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2452.[MT7]-GAVPLEMLEIALR.2y10_1.heavy 778.454 / 1184.67 63529.0 47.837799072265625 50 20 10 10 10 16.18584340022597 6.178238447469714 0.0 3 0.9992816296679468 46.04284739845394 63529.0 1019.5313649948903 0.0 - - - - - - - 278.5 127 8 TTK TTK protein kinase 797 100 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2452.[MT7]-GAVPLEMLEIALR.2y7_1.heavy 778.454 / 845.491 7209.0 47.837799072265625 50 20 10 10 10 16.18584340022597 6.178238447469714 0.0 3 0.9992816296679468 46.04284739845394 7209.0 77.63538461538462 0.0 - - - - - - - 148.35294117647058 14 17 TTK TTK protein kinase 799 101 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2458.[MT7]-EANAFEEQLLK[MT7].2b8_1.heavy 790.432 / 1063.48 899.0 33.13719940185547 47 17 10 10 10 4.732111613011155 21.132214997855392 0.0 3 0.9725445940836326 7.431042605549103 899.0 0.0 4.0 - - - - - - - 0.0 1 0 BUB1 budding uninhibited by benzimidazoles 1 homolog (yeast) 801 101 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2458.[MT7]-EANAFEEQLLK[MT7].2b7_1.heavy 790.432 / 935.423 2398.0 33.13719940185547 47 17 10 10 10 4.732111613011155 21.132214997855392 0.0 3 0.9725445940836326 7.431042605549103 2398.0 8.701803906622201 1.0 - - - - - - - 300.0 4 2 BUB1 budding uninhibited by benzimidazoles 1 homolog (yeast) 803 101 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2458.[MT7]-EANAFEEQLLK[MT7].2b5_1.heavy 790.432 / 677.338 3897.0 33.13719940185547 47 17 10 10 10 4.732111613011155 21.132214997855392 0.0 3 0.9725445940836326 7.431042605549103 3897.0 5.440445746149365 0.0 - - - - - - - 300.0 7 5 BUB1 budding uninhibited by benzimidazoles 1 homolog (yeast) 805 101 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2458.[MT7]-EANAFEEQLLK[MT7].2b4_1.heavy 790.432 / 530.269 7195.0 33.13719940185547 47 17 10 10 10 4.732111613011155 21.132214997855392 0.0 3 0.9725445940836326 7.431042605549103 7195.0 9.802919748659663 0.0 - - - - - - - 300.0 14 3 BUB1 budding uninhibited by benzimidazoles 1 homolog (yeast) 807 102 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1953.[MT7]-DPALSQLIC[CAM]FC[CAM]R.2y6_1.heavy 812.409 / 868.417 1818.0 38.111900329589844 46 16 10 10 10 2.305047282090618 34.76604991171335 0.0 3 0.9609311595000599 6.223331311003235 1818.0 6.153230769230769 0.0 - - - - - - - 309.90909090909093 3 11 GADD45A growth arrest and DNA-damage-inducible, alpha 809 102 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1953.[MT7]-DPALSQLIC[CAM]FC[CAM]R.2y8_1.heavy 812.409 / 1083.51 2955.0 38.111900329589844 46 16 10 10 10 2.305047282090618 34.76604991171335 0.0 3 0.9609311595000599 6.223331311003235 2955.0 14.045297961949943 0.0 - - - - - - - 265.0 5 6 GADD45A growth arrest and DNA-damage-inducible, alpha 811 102 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1953.[MT7]-DPALSQLIC[CAM]FC[CAM]R.2y9_1.heavy 812.409 / 1196.59 2955.0 38.111900329589844 46 16 10 10 10 2.305047282090618 34.76604991171335 0.0 3 0.9609311595000599 6.223331311003235 2955.0 24.889691629955948 0.0 - - - - - - - 227.0 5 6 GADD45A growth arrest and DNA-damage-inducible, alpha 813 102 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1953.[MT7]-DPALSQLIC[CAM]FC[CAM]R.2b6_1.heavy 812.409 / 756.401 N/A 38.111900329589844 46 16 10 10 10 2.305047282090618 34.76604991171335 0.0 3 0.9609311595000599 6.223331311003235 2273.0 3.9994134897360705 1.0 - - - - - - - 389.85714285714283 4 7 GADD45A growth arrest and DNA-damage-inducible, alpha 815 103 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1951.[MT7]-HLETFEHPNVVR.4y4_1.heavy 406.22 / 487.299 36153.0 23.56170082092285 50 20 10 10 10 11.349264530020426 8.811143641553663 0.0 3 0.9939266384915244 15.828062481858629 36153.0 59.335076335877865 0.0 - - - - - - - 262.0 72 5 CDK6 cyclin-dependent kinase 6 817 103 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1951.[MT7]-HLETFEHPNVVR.4y5_1.heavy 406.22 / 584.352 69685.0 23.56170082092285 50 20 10 10 10 11.349264530020426 8.811143641553663 0.0 3 0.9939266384915244 15.828062481858629 69685.0 321.8276717557252 0.0 - - - - - - - 262.0 139 8 CDK6 cyclin-dependent kinase 6 819 103 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1951.[MT7]-HLETFEHPNVVR.4y6_1.heavy 406.22 / 721.41 9955.0 23.56170082092285 50 20 10 10 10 11.349264530020426 8.811143641553663 0.0 3 0.9939266384915244 15.828062481858629 9955.0 34.19656488549619 0.0 - - - - - - - 262.0 19 3 CDK6 cyclin-dependent kinase 6 821 103 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1951.[MT7]-HLETFEHPNVVR.4b3_1.heavy 406.22 / 524.295 12837.0 23.56170082092285 50 20 10 10 10 11.349264530020426 8.811143641553663 0.0 3 0.9939266384915244 15.828062481858629 12837.0 59.77534351145039 0.0 - - - - - - - 262.0 25 5 CDK6 cyclin-dependent kinase 6 823 104 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1819.[MT7]-TYVENRPK[MT7].3y6_1.heavy 432.25 / 886.523 1312.0 16.909149646759033 35 10 10 5 10 4.053686128377919 24.6689054931875 0.04860115051269531 3 0.8301194109400805 2.950810550003432 1312.0 8.0 0.0 - - - - - - - 328.0 2 1 MAPK8 mitogen-activated protein kinase 8 825 104 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1819.[MT7]-TYVENRPK[MT7].3y5_1.heavy 432.25 / 787.454 12953.0 16.909149646759033 35 10 10 5 10 4.053686128377919 24.6689054931875 0.04860115051269531 3 0.8301194109400805 2.950810550003432 12953.0 115.62921951219514 0.0 - - - - - - - 246.0 25 6 MAPK8 mitogen-activated protein kinase 8 827 104 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1819.[MT7]-TYVENRPK[MT7].3y7_2.heavy 432.25 / 525.297 35907.0 16.909149646759033 35 10 10 5 10 4.053686128377919 24.6689054931875 0.04860115051269531 3 0.8301194109400805 2.950810550003432 35907.0 225.2006968641115 0.0 - - - - - - - 205.0 71 8 MAPK8 mitogen-activated protein kinase 8 829 104 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1819.[MT7]-TYVENRPK[MT7].3b3_1.heavy 432.25 / 508.289 16396.0 16.909149646759033 35 10 10 5 10 4.053686128377919 24.6689054931875 0.04860115051269531 3 0.8301194109400805 2.950810550003432 16396.0 64.98414634146341 0.0 - - - - - - - 298.1818181818182 32 11 MAPK8 mitogen-activated protein kinase 8 831 105 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1950.[MT7]-ENVVNFIDC[CAM]LVR.2y4_1.heavy 811.428 / 547.302 9119.0 45.12465000152588 40 14 10 6 10 1.7365643655955576 38.56178640149522 0.038600921630859375 3 0.9361033244527186 4.856050155476398 9119.0 57.5084576357179 0.0 - - - - - - - 276.3636363636364 18 11 ORC3 origin recognition complex, subunit 3 833 105 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1950.[MT7]-ENVVNFIDC[CAM]LVR.2y8_1.heavy 811.428 / 1036.52 9727.0 45.12465000152588 40 14 10 6 10 1.7365643655955576 38.56178640149522 0.038600921630859375 3 0.9361033244527186 4.856050155476398 9727.0 30.07690789473684 0.0 - - - - - - - 243.33333333333334 19 12 ORC3 origin recognition complex, subunit 3 835 105 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1950.[MT7]-ENVVNFIDC[CAM]LVR.2b4_1.heavy 811.428 / 586.332 11429.0 45.12465000152588 40 14 10 6 10 1.7365643655955576 38.56178640149522 0.038600921630859375 3 0.9361033244527186 4.856050155476398 11429.0 35.77954003023275 0.0 - - - - - - - 252.53846153846155 22 13 ORC3 origin recognition complex, subunit 3 837 105 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1950.[MT7]-ENVVNFIDC[CAM]LVR.2y9_1.heavy 811.428 / 1135.59 11064.0 45.12465000152588 40 14 10 6 10 1.7365643655955576 38.56178640149522 0.038600921630859375 3 0.9361033244527186 4.856050155476398 11064.0 37.107654320987656 0.0 - - - - - - - 259.4 22 15 ORC3 origin recognition complex, subunit 3 839 106 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1817.[MT7]-SAIIQNVEK[MT7].2y4_1.heavy 645.387 / 633.369 16803.0 24.461700439453125 45 15 10 10 10 2.1982259168015577 36.43992456812336 0.0 3 0.9529916263346556 5.6696808367404685 16803.0 25.604571428571433 0.0 - - - - - - - 665.0 33 8 PLCG1 phospholipase C, gamma 1 841 106 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1817.[MT7]-SAIIQNVEK[MT7].2y5_1.heavy 645.387 / 761.427 22684.0 24.461700439453125 45 15 10 10 10 2.1982259168015577 36.43992456812336 0.0 3 0.9529916263346556 5.6696808367404685 22684.0 55.089714285714294 0.0 - - - - - - - 280.0 45 3 PLCG1 phospholipase C, gamma 1 843 106 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1817.[MT7]-SAIIQNVEK[MT7].2b4_1.heavy 645.387 / 529.347 20163.0 24.461700439453125 45 15 10 10 10 2.1982259168015577 36.43992456812336 0.0 3 0.9529916263346556 5.6696808367404685 20163.0 67.48432653061225 1.0 - - - - - - - 280.0 40 4 PLCG1 phospholipase C, gamma 1 845 106 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1817.[MT7]-SAIIQNVEK[MT7].2y6_1.heavy 645.387 / 874.511 31645.0 24.461700439453125 45 15 10 10 10 2.1982259168015577 36.43992456812336 0.0 3 0.9529916263346556 5.6696808367404685 31645.0 123.56619047619047 0.0 - - - - - - - 280.0 63 4 PLCG1 phospholipase C, gamma 1 847 107 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1818.[MT7]-ETIPLTAEK[MT7].2y4_1.heavy 645.381 / 592.342 21479.0 25.863100051879883 43 18 10 5 10 2.4266479639613268 41.209108813936595 0.045398712158203125 3 0.9823023075716694 9.263208917100277 21479.0 12.17813180822852 0.0 - - - - - - - 303.0 42 3 CCND1 cyclin D1 849 107 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1818.[MT7]-ETIPLTAEK[MT7].2y8_1.heavy 645.381 / 1016.61 19059.0 25.863100051879883 43 18 10 5 10 2.4266479639613268 41.209108813936595 0.045398712158203125 3 0.9823023075716694 9.263208917100277 19059.0 69.24307339824892 0.0 - - - - - - - 303.0 38 1 CCND1 cyclin D1 851 107 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1818.[MT7]-ETIPLTAEK[MT7].2y5_1.heavy 645.381 / 705.426 9681.0 25.863100051879883 43 18 10 5 10 2.4266479639613268 41.209108813936595 0.045398712158203125 3 0.9823023075716694 9.263208917100277 9681.0 29.923090909090913 0.0 - - - - - - - 303.0 19 5 CCND1 cyclin D1 853 107 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1818.[MT7]-ETIPLTAEK[MT7].2y6_1.heavy 645.381 / 802.479 220540.0 25.863100051879883 43 18 10 5 10 2.4266479639613268 41.209108813936595 0.045398712158203125 3 0.9823023075716694 9.263208917100277 220540.0 182.26446280991735 0.0 - - - - - - - 706.0 441 6 CCND1 cyclin D1 855 108 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1815.[MT7]-FLPSPVVIK[MT7].2y5_1.heavy 644.418 / 699.489 9024.0 35.19470024108887 40 15 10 5 10 3.171079025052356 31.535007235699197 0.041599273681640625 3 0.9549414374650492 5.792010478520204 9024.0 36.42690885833067 0.0 - - - - - - - 265.0 18 3 CUL3 cullin 3 857 108 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1815.[MT7]-FLPSPVVIK[MT7].2b4_1.heavy 644.418 / 589.347 3185.0 35.19470024108887 40 15 10 5 10 3.171079025052356 31.535007235699197 0.041599273681640625 3 0.9549414374650492 5.792010478520204 3185.0 3.239163853161273 1.0 - - - - - - - 265.0 6 7 CUL3 cullin 3 859 108 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1815.[MT7]-FLPSPVVIK[MT7].2y3_1.heavy 644.418 / 503.367 4777.0 35.19470024108887 40 15 10 5 10 3.171079025052356 31.535007235699197 0.041599273681640625 3 0.9549414374650492 5.792010478520204 4777.0 6.191740768651093 0.0 - - - - - - - 265.0 9 4 CUL3 cullin 3 861 108 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1815.[MT7]-FLPSPVVIK[MT7].2y7_1.heavy 644.418 / 883.573 33707.0 35.19470024108887 40 15 10 5 10 3.171079025052356 31.535007235699197 0.041599273681640625 3 0.9549414374650492 5.792010478520204 33707.0 166.15086972598843 0.0 - - - - - - - 682.4285714285714 67 7 CUL3 cullin 3 863 109 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1569.[MT7]-SLLADR.2b3_1.heavy 409.746 / 458.31 21100.0 24.01689910888672 42 12 10 10 10 1.1508000878016822 60.559665660932424 0.0 3 0.8823769811998932 3.5625781300972634 21100.0 46.31438998957247 0.0 - - - - - - - 274.0 42 5 C17orf64;ANAPC2;LOC650621 chromosome 17 open reading frame 64;anaphase promoting complex subunit 2;anaphase-promoting complex subunit 2-like 865 109 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1569.[MT7]-SLLADR.2y4_1.heavy 409.746 / 474.267 20004.0 24.01689910888672 42 12 10 10 10 1.1508000878016822 60.559665660932424 0.0 3 0.8823769811998932 3.5625781300972634 20004.0 40.27569343065693 0.0 - - - - - - - 743.7142857142857 40 7 C17orf64;ANAPC2;LOC650621 chromosome 17 open reading frame 64;anaphase promoting complex subunit 2;anaphase-promoting complex subunit 2-like 867 109 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1569.[MT7]-SLLADR.2y5_1.heavy 409.746 / 587.351 25759.0 24.01689910888672 42 12 10 10 10 1.1508000878016822 60.559665660932424 0.0 3 0.8823769811998932 3.5625781300972634 25759.0 34.2468456725756 0.0 - - - - - - - 274.0 51 4 C17orf64;ANAPC2;LOC650621 chromosome 17 open reading frame 64;anaphase promoting complex subunit 2;anaphase-promoting complex subunit 2-like 869 109 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1569.[MT7]-SLLADR.2b5_1.heavy 409.746 / 644.374 40556.0 24.01689910888672 42 12 10 10 10 1.1508000878016822 60.559665660932424 0.0 3 0.8823769811998932 3.5625781300972634 40556.0 87.03258394160584 0.0 - - - - - - - 608.8888888888889 81 9 C17orf64;ANAPC2;LOC650621 chromosome 17 open reading frame 64;anaphase promoting complex subunit 2;anaphase-promoting complex subunit 2-like 871 110 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1816.[MT7]-QLSSTVLLQR.2y8_1.heavy 644.889 / 903.526 8667.0 29.241500854492188 42 18 4 10 10 4.125478705837376 18.96570201340838 0.0 3 0.9847595368656702 9.984128662305086 8667.0 23.908965517241377 0.0 - - - - - - - 667.0 17 8 PIAS1 protein inhibitor of activated STAT, 1 873 110 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1816.[MT7]-QLSSTVLLQR.2y5_1.heavy 644.889 / 628.414 3000.0 29.241500854492188 42 18 4 10 10 4.125478705837376 18.96570201340838 0.0 3 0.9847595368656702 9.984128662305086 3000.0 3.719676064787042 5.0 - - - - - - - 333.0 30 4 PIAS1 protein inhibitor of activated STAT, 1 875 110 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1816.[MT7]-QLSSTVLLQR.2y9_1.heavy 644.889 / 1016.61 8333.0 29.241500854492188 42 18 4 10 10 4.125478705837376 18.96570201340838 0.0 3 0.9847595368656702 9.984128662305086 8333.0 33.76554965760363 0.0 - - - - - - - 333.0 16 8 PIAS1 protein inhibitor of activated STAT, 1 877 110 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1816.[MT7]-QLSSTVLLQR.2y7_1.heavy 644.889 / 816.494 4000.0 29.241500854492188 42 18 4 10 10 4.125478705837376 18.96570201340838 0.0 3 0.9847595368656702 9.984128662305086 4000.0 5.94052513128282 2.0 - - - - - - - 333.0 8 6 PIAS1 protein inhibitor of activated STAT, 1 879 111 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1813.[MT7]-LAEIIWQNR.2y4_1.heavy 643.87 / 603.3 32921.0 36.76385021209717 43 17 10 6 10 4.29436213567677 23.286345408371226 0.039798736572265625 3 0.9780240294677065 8.309784800014862 32921.0 68.95044640663423 0.0 - - - - - - - 371.5 65 8 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 881 111 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1813.[MT7]-LAEIIWQNR.2y8_1.heavy 643.87 / 1029.55 50495.0 36.76385021209717 43 17 10 6 10 4.29436213567677 23.286345408371226 0.039798736572265625 3 0.9780240294677065 8.309784800014862 50495.0 128.53272727272727 0.0 - - - - - - - 396.2 100 5 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 883 111 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1813.[MT7]-LAEIIWQNR.2y5_1.heavy 643.87 / 716.384 40346.0 36.76385021209717 43 17 10 6 10 4.29436213567677 23.286345408371226 0.039798736572265625 3 0.9780240294677065 8.309784800014862 40346.0 72.92754630057493 0.0 - - - - - - - 357.77777777777777 80 9 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 885 111 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1813.[MT7]-LAEIIWQNR.2y6_1.heavy 643.87 / 829.468 33663.0 36.76385021209717 43 17 10 6 10 4.29436213567677 23.286345408371226 0.039798736572265625 3 0.9780240294677065 8.309784800014862 33663.0 168.24507441348973 0.0 - - - - - - - 371.5 67 6 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 887 112 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1814.[MT7]-NYDLSFLK[MT7].2y4_1.heavy 644.363 / 638.399 9053.0 34.705299377441406 45 15 10 10 10 1.7384712464312304 45.210803018619025 0.0 3 0.952714171095539 5.65288959258541 9053.0 5.067857142857142 1.0 - - - - - - - 701.2222222222222 23 9 EGFR epidermal growth factor receptor 889 112 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1814.[MT7]-NYDLSFLK[MT7].2b3_1.heavy 644.363 / 537.242 26062.0 34.705299377441406 45 15 10 10 10 1.7384712464312304 45.210803018619025 0.0 3 0.952714171095539 5.65288959258541 26062.0 41.575660893345486 0.0 - - - - - - - 609.8888888888889 52 9 EGFR epidermal growth factor receptor 891 112 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1814.[MT7]-NYDLSFLK[MT7].2y5_1.heavy 644.363 / 751.483 15089.0 34.705299377441406 45 15 10 10 10 1.7384712464312304 45.210803018619025 0.0 3 0.952714171095539 5.65288959258541 15089.0 27.487856856717286 0.0 - - - - - - - 640.3333333333334 30 9 EGFR epidermal growth factor receptor 893 112 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1814.[MT7]-NYDLSFLK[MT7].2y6_1.heavy 644.363 / 866.51 9053.0 34.705299377441406 45 15 10 10 10 1.7384712464312304 45.210803018619025 0.0 3 0.952714171095539 5.65288959258541 9053.0 25.89548269581056 0.0 - - - - - - - 617.5 18 8 EGFR epidermal growth factor receptor 895 113 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2461.[MT7]-ELTLQDVELLK[MT7].3y3_1.heavy 530.318 / 517.383 55894.0 37.942100524902344 31 11 2 10 8 0.6688536445866493 77.94323561317987 0.0 4 0.8534929370855021 3.1840682120591635 55894.0 70.99481648861834 0.0 - - - - - - - 261.7142857142857 111 7 TRIM32 tripartite motif-containing 32 897 113 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2461.[MT7]-ELTLQDVELLK[MT7].3b6_1.heavy 530.318 / 844.453 37110.0 37.942100524902344 31 11 2 10 8 0.6688536445866493 77.94323561317987 0.0 4 0.8534929370855021 3.1840682120591635 37110.0 161.88876658566926 1.0 - - - - - - - 305.3333333333333 90 3 TRIM32 tripartite motif-containing 32 899 113 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2461.[MT7]-ELTLQDVELLK[MT7].3b4_1.heavy 530.318 / 601.368 34590.0 37.942100524902344 31 11 2 10 8 0.6688536445866493 77.94323561317987 0.0 4 0.8534929370855021 3.1840682120591635 34590.0 158.4260941384758 0.0 - - - - - - - 343.5 69 8 TRIM32 tripartite motif-containing 32 901 113 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2461.[MT7]-ELTLQDVELLK[MT7].3y4_1.heavy 530.318 / 646.426 51313.0 37.942100524902344 31 11 2 10 8 0.6688536445866493 77.94323561317987 0.0 4 0.8534929370855021 3.1840682120591635 51313.0 148.33714410480349 1.0 - - - - - - - 343.5 305 6 TRIM32 tripartite motif-containing 32 903 114 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1811.[MT7]-IPALDLLIK[MT7].2y4_1.heavy 642.431 / 630.467 16300.0 40.63359832763672 45 15 10 10 10 2.584378700322837 38.69401956745276 0.0 3 0.959085363600334 6.080384420822918 16300.0 11.615801704105346 0.0 - - - - - - - 323.0 32 2 PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 905 114 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1811.[MT7]-IPALDLLIK[MT7].2y8_1.heavy 642.431 / 1026.67 247894.0 40.63359832763672 45 15 10 10 10 2.584378700322837 38.69401956745276 0.0 3 0.959085363600334 6.080384420822918 247894.0 41.24984244999115 0.0 - - - - - - - 1130.0 495 1 PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 907 114 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1811.[MT7]-IPALDLLIK[MT7].2y5_1.heavy 642.431 / 745.494 N/A 40.63359832763672 45 15 10 10 10 2.584378700322837 38.69401956745276 0.0 3 0.959085363600334 6.080384420822918 807.0 4.3431794573659985 9.0 - - - - - - - 302.5 8 8 PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 909 114 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1811.[MT7]-IPALDLLIK[MT7].2y3_1.heavy 642.431 / 517.383 31471.0 40.63359832763672 45 15 10 10 10 2.584378700322837 38.69401956745276 0.0 3 0.959085363600334 6.080384420822918 31471.0 35.87771995043371 0.0 - - - - - - - 290.4 62 5 PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 911 115 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1812.[MT7]-LGRLDAVLQR.2y5_1.heavy 642.897 / 586.367 N/A N/A - - - - - - - - - 0.0 - - - - - - - PML promyelocytic leukemia 913 115 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1812.[MT7]-LGRLDAVLQR.2y6_1.heavy 642.897 / 701.394 N/A N/A - - - - - - - - - 0.0 - - - - - - - PML promyelocytic leukemia 915 115 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1812.[MT7]-LGRLDAVLQR.2b7_1.heavy 642.897 / 869.532 N/A N/A - - - - - - - - - 0.0 - - - - - - - PML promyelocytic leukemia 917 115 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1812.[MT7]-LGRLDAVLQR.2b5_1.heavy 642.897 / 699.427 N/A N/A - - - - - - - - - 0.0 - - - - - - - PML promyelocytic leukemia 919 116 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1563.[MT7]-DVPATR.2y4_1.heavy 401.731 / 444.257 30833.0 15.704899787902832 45 15 10 10 10 1.7270379952792614 39.2623738371811 0.0 3 0.9548171663938367 5.783978899522408 30833.0 75.66954359673025 0.0 - - - - - - - 228.55555555555554 61 9 HUWE1 HECT, UBA and WWE domain containing 1 921 116 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1563.[MT7]-DVPATR.2y5_1.heavy 401.731 / 543.325 29659.0 15.704899787902832 45 15 10 10 10 1.7270379952792614 39.2623738371811 0.0 3 0.9548171663938367 5.783978899522408 29659.0 91.63807733979982 0.0 - - - - - - - 314.57142857142856 59 14 HUWE1 HECT, UBA and WWE domain containing 1 923 116 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1563.[MT7]-DVPATR.2b4_1.heavy 401.731 / 527.295 7635.0 15.704899787902832 45 15 10 10 10 1.7270379952792614 39.2623738371811 0.0 3 0.9548171663938367 5.783978899522408 7635.0 11.792923723085593 1.0 - - - - - - - 660.5 17 8 HUWE1 HECT, UBA and WWE domain containing 1 925 116 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1563.[MT7]-DVPATR.2b1_1.heavy 401.731 / 260.136 20555.0 15.704899787902832 45 15 10 10 10 1.7270379952792614 39.2623738371811 0.0 3 0.9548171663938367 5.783978899522408 20555.0 82.5133453466493 0.0 - - - - - - - 235.1 41 10 HUWE1 HECT, UBA and WWE domain containing 1 927 117 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1810.[MT7]-LLDEELYSR.2y8_1.heavy 641.344 / 1024.49 32446.0 32.681800842285156 45 20 10 5 10 7.792193288805338 12.83335721967589 0.04840087890625 3 0.9940130900705523 15.942047391588995 32446.0 96.71403846153845 0.0 - - - - - - - 312.0 64 3 UBA7 ubiquitin-like modifier activating enzyme 7 929 117 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1810.[MT7]-LLDEELYSR.2y6_1.heavy 641.344 / 796.384 27454.0 32.681800842285156 45 20 10 5 10 7.792193288805338 12.83335721967589 0.04840087890625 3 0.9940130900705523 15.942047391588995 27454.0 36.517339743589744 0.0 - - - - - - - 312.0 54 3 UBA7 ubiquitin-like modifier activating enzyme 7 931 117 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1810.[MT7]-LLDEELYSR.2b5_1.heavy 641.344 / 744.39 12791.0 32.681800842285156 45 20 10 5 10 7.792193288805338 12.83335721967589 0.04840087890625 3 0.9940130900705523 15.942047391588995 12791.0 27.194540598290594 0.0 - - - - - - - 668.5714285714286 25 7 UBA7 ubiquitin-like modifier activating enzyme 7 933 117 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1810.[MT7]-LLDEELYSR.2y7_1.heavy 641.344 / 911.411 20591.0 32.681800842285156 45 20 10 5 10 7.792193288805338 12.83335721967589 0.04840087890625 3 0.9940130900705523 15.942047391588995 20591.0 94.37541666666667 0.0 - - - - - - - 312.0 41 6 UBA7 ubiquitin-like modifier activating enzyme 7 935 118 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1564.[MT7]-FAATVR.2b3_1.heavy 404.743 / 434.252 16525.0 22.224700927734375 46 18 10 10 8 6.5158240135395165 15.347253055362701 0.0 4 0.9864499041094196 10.590087984617094 16525.0 42.84259259259259 0.0 - - - - - - - 425.25 33 8 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 937 118 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1564.[MT7]-FAATVR.2y5_1.heavy 404.743 / 517.309 121753.0 22.224700927734375 46 18 10 10 8 6.5158240135395165 15.347253055362701 0.0 4 0.9864499041094196 10.590087984617094 121753.0 50.076279606767265 0.0 - - - - - - - 405.0 243 3 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 939 118 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1564.[MT7]-FAATVR.2b4_1.heavy 404.743 / 535.3 25274.0 22.224700927734375 46 18 10 10 8 6.5158240135395165 15.347253055362701 0.0 4 0.9864499041094196 10.590087984617094 25274.0 21.495034293552813 1.0 - - - - - - - 405.0 95 3 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 941 118 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1564.[MT7]-FAATVR.2y1_1.heavy 404.743 / 175.119 63671.0 22.224700927734375 46 18 10 10 8 6.5158240135395165 15.347253055362701 0.0 4 0.9864499041094196 10.590087984617094 63671.0 19.870843039899803 0.0 - - - - - - - 1353.857142857143 127 7 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 943 119 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1561.[MT7]-DVVYR.2b3_1.heavy 398.228 / 458.273 19003.0 19.5132999420166 29 15 0 10 4 2.2479820530247063 44.48434090719182 0.0 9 0.9569726813690986 5.928169140504735 19003.0 58.589999999999996 0.0 - - - - - - - 353.09090909090907 38 11 AKT2 v-akt murine thymoma viral oncogene homolog 2 945 119 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1561.[MT7]-DVVYR.2y4_1.heavy 398.228 / 536.319 23498.0 19.5132999420166 29 15 0 10 4 2.2479820530247063 44.48434090719182 0.0 9 0.9569726813690986 5.928169140504735 23498.0 62.482446982055464 0.0 - - - - - - - 700.4285714285714 46 7 AKT2 v-akt murine thymoma viral oncogene homolog 2 947 119 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1561.[MT7]-DVVYR.2y3_1.heavy 398.228 / 437.251 5108.0 19.5132999420166 29 15 0 10 4 2.2479820530247063 44.48434090719182 0.0 9 0.9569726813690986 5.928169140504735 5108.0 2.1869113149847093 10.0 - - - - - - - 295.1111111111111 1011 9 AKT2 v-akt murine thymoma viral oncogene homolog 2 949 119 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1561.[MT7]-DVVYR.2y1_1.heavy 398.228 / 175.119 19820.0 19.5132999420166 29 15 0 10 4 2.2479820530247063 44.48434090719182 0.0 9 0.9569726813690986 5.928169140504735 19820.0 13.313420801345895 6.0 - - - - - - - 1780.7142857142858 3291 7 AKT2 v-akt murine thymoma viral oncogene homolog 2 951 120 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2360.[MT7]-AVTIHDTEK[MT7].3y3_1.heavy 434.582 / 521.305 56629.0 18.712099075317383 50 20 10 10 10 11.530281957055857 8.672814799538 0.0 3 0.9968165324286387 21.867386134898297 56629.0 37.24295721237343 0.0 - - - - - - - 352.8 113 5 UBA6 ubiquitin-like modifier activating enzyme 6 953 120 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2360.[MT7]-AVTIHDTEK[MT7].3b4_1.heavy 434.582 / 529.347 27237.0 18.712099075317383 50 20 10 10 10 11.530281957055857 8.672814799538 0.0 3 0.9968165324286387 21.867386134898297 27237.0 48.6375 0.0 - - - - - - - 326.6666666666667 54 9 UBA6 ubiquitin-like modifier activating enzyme 6 955 120 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2360.[MT7]-AVTIHDTEK[MT7].3y4_1.heavy 434.582 / 636.332 57608.0 18.712099075317383 50 20 10 10 10 11.530281957055857 8.672814799538 0.0 3 0.9968165324286387 21.867386134898297 57608.0 103.85115646258504 0.0 - - - - - - - 672.0 115 7 UBA6 ubiquitin-like modifier activating enzyme 6 957 120 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2360.[MT7]-AVTIHDTEK[MT7].3y1_1.heavy 434.582 / 291.215 107575.0 18.712099075317383 50 20 10 10 10 11.530281957055857 8.672814799538 0.0 3 0.9968165324286387 21.867386134898297 107575.0 34.08283119497282 0.0 - - - - - - - 980.0 215 1 UBA6 ubiquitin-like modifier activating enzyme 6 959 121 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1562.[MT7]-GTFGK[MT7].2b3_1.heavy 399.242 / 450.247 13678.0 18.79990005493164 44 14 10 10 10 2.4414693816783357 31.286177061314746 0.0 3 0.9444744350848371 5.212974066101652 13678.0 29.167666698672345 0.0 - - - - - - - 342.0 27 4 AKT3;AKT1;AKT2 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 1;v-akt murine thymoma viral oncogene homolog 2 961 121 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1562.[MT7]-GTFGK[MT7].2y4_1.heavy 399.242 / 596.352 45723.0 18.79990005493164 44 14 10 10 10 2.4414693816783357 31.286177061314746 0.0 3 0.9444744350848371 5.212974066101652 45723.0 294.5366264111315 0.0 - - - - - - - 342.0 91 8 AKT3;AKT1;AKT2 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 1;v-akt murine thymoma viral oncogene homolog 2 963 121 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1562.[MT7]-GTFGK[MT7].2b4_1.heavy 399.242 / 507.268 4299.0 18.79990005493164 44 14 10 10 10 2.4414693816783357 31.286177061314746 0.0 3 0.9444744350848371 5.212974066101652 4299.0 10.994884910485933 1.0 - - - - - - - 248.45454545454547 13 11 AKT3;AKT1;AKT2 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 1;v-akt murine thymoma viral oncogene homolog 2 965 121 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1562.[MT7]-GTFGK[MT7].2y3_1.heavy 399.242 / 495.305 35172.0 18.79990005493164 44 14 10 10 10 2.4414693816783357 31.286177061314746 0.0 3 0.9444744350848371 5.212974066101652 35172.0 76.81638225255973 0.0 - - - - - - - 757.125 70 8 AKT3;AKT1;AKT2 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 1;v-akt murine thymoma viral oncogene homolog 2 967 122 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1567.[MT7]-AVPLK[MT7].2y4_1.heavy 408.283 / 600.42 21735.0 21.556125164031982 33 9 10 6 8 0.731316581176541 76.44708116833081 0.03890037536621094 4 0.817460157607838 2.843441374089465 21735.0 25.847591594477706 1.0 - - - - - - - 277.2 43 5 PLCG1;TTN phospholipase C, gamma 1;titin 969 122 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1567.[MT7]-AVPLK[MT7].2b4_1.heavy 408.283 / 525.352 2543.0 21.556125164031982 33 9 10 6 8 0.731316581176541 76.44708116833081 0.03890037536621094 4 0.817460157607838 2.843441374089465 2543.0 10.180330876330876 4.0 - - - - - - - 317.625 11 8 PLCG1;TTN phospholipase C, gamma 1;titin 971 122 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1567.[MT7]-AVPLK[MT7].2y3_1.heavy 408.283 / 501.352 129945.0 21.556125164031982 33 9 10 6 8 0.731316581176541 76.44708116833081 0.03890037536621094 4 0.817460157607838 2.843441374089465 129945.0 545.1849094019752 0.0 - - - - - - - 330.0 259 7 PLCG1;TTN phospholipase C, gamma 1;titin 973 122 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1567.[MT7]-AVPLK[MT7].2y1_1.heavy 408.283 / 291.215 18729.0 21.556125164031982 33 9 10 6 8 0.731316581176541 76.44708116833081 0.03890037536621094 4 0.817460157607838 2.843441374089465 18729.0 11.578693569172025 2.0 - - - - - - - 694.0 59 2 PLCG1;TTN phospholipase C, gamma 1;titin 975 123 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1568.[MT7]-IGLLTR.2y4_1.heavy 408.775 / 502.335 3333.0 29.639200687408447 37 20 4 5 8 4.185208130834985 23.89367431054119 0.04879951477050781 4 0.9937670725283196 15.623937670030346 3333.0 19.61765765765766 0.0 - - - - - - - 333.0 6 3 MCM6 minichromosome maintenance complex component 6 977 123 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1568.[MT7]-IGLLTR.2b3_1.heavy 408.775 / 428.299 12667.0 29.639200687408447 37 20 4 5 8 4.185208130834985 23.89367431054119 0.04879951477050781 4 0.9937670725283196 15.623937670030346 12667.0 23.497725342215304 1.0 - - - - - - - 667.0 154 7 MCM6 minichromosome maintenance complex component 6 979 123 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1568.[MT7]-IGLLTR.2y5_1.heavy 408.775 / 559.356 44000.0 29.639200687408447 37 20 4 5 8 4.185208130834985 23.89367431054119 0.04879951477050781 4 0.9937670725283196 15.623937670030346 44000.0 150.33497804943516 0.0 - - - - - - - 333.0 88 5 MCM6 minichromosome maintenance complex component 6 981 123 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1568.[MT7]-IGLLTR.2b4_1.heavy 408.775 / 541.383 12000.0 29.639200687408447 37 20 4 5 8 4.185208130834985 23.89367431054119 0.04879951477050781 4 0.9937670725283196 15.623937670030346 12000.0 67.02702702702703 0.0 - - - - - - - 333.0 24 6 MCM6 minichromosome maintenance complex component 6 983 124 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1565.[MT7]-EFDVR.2b4_1.heavy 405.217 / 635.316 5407.0 23.109399795532227 36 16 2 10 8 6.210367147000825 16.102107594120753 0.0 4 0.960768951355927 6.210367044792211 5407.0 13.861438402334123 3.0 - - - - - - - 257.0 21 4 WEE1 WEE1 homolog (S. pombe) 985 124 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1565.[MT7]-EFDVR.2b2_1.heavy 405.217 / 421.22 7725.0 23.109399795532227 36 16 2 10 8 6.210367147000825 16.102107594120753 0.0 4 0.960768951355927 6.210367044792211 7725.0 15.128362138724832 1.0 - - - - - - - 257.0 15 9 WEE1 WEE1 homolog (S. pombe) 987 124 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1565.[MT7]-EFDVR.2y1_1.heavy 405.217 / 175.119 N/A 23.109399795532227 36 16 2 10 8 6.210367147000825 16.102107594120753 0.0 4 0.960768951355927 6.210367044792211 13390.0 2.134834123222749 5.0 - - - - - - - 257.0 73 1 WEE1 WEE1 homolog (S. pombe) 989 125 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1566.[MT7]-DVALPR.2y4_1.heavy 407.749 / 456.293 34983.0 23.191200256347656 43 13 10 10 10 1.4690249168306866 57.49408129886147 0.0 3 0.925723895523484 4.49999773764398 34983.0 8.805981756812214 1.0 - - - - - - - 259.0 72 4 CDK6 cyclin-dependent kinase 6 991 125 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1566.[MT7]-DVALPR.2b3_1.heavy 407.749 / 430.242 49753.0 23.191200256347656 43 13 10 10 10 1.4690249168306866 57.49408129886147 0.0 3 0.925723895523484 4.49999773764398 49753.0 15.617794313289702 1.0 - - - - - - - 259.0 99 1 CDK6 cyclin-dependent kinase 6 993 125 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1566.[MT7]-DVALPR.2y5_1.heavy 407.749 / 555.361 107280.0 23.191200256347656 43 13 10 10 10 1.4690249168306866 57.49408129886147 0.0 3 0.925723895523484 4.49999773764398 107280.0 170.23519464693788 0.0 - - - - - - - 621.6 214 5 CDK6 cyclin-dependent kinase 6 995 125 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1566.[MT7]-DVALPR.2b4_1.heavy 407.749 / 543.326 38351.0 23.191200256347656 43 13 10 10 10 1.4690249168306866 57.49408129886147 0.0 3 0.925723895523484 4.49999773764398 38351.0 56.818834898182885 0.0 - - - - - - - 259.0 76 2 CDK6 cyclin-dependent kinase 6 997 126 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1966.[MT7]-VVDPTPEQFQAFR.2y6_1.heavy 839.44 / 796.41 1242.0 32.67373402913412 39 20 10 5 4 3.677865251176678 27.1896856384302 0.04840087890625 7 0.9949902316976645 17.42898407799055 1242.0 0.8928540772532187 19.0 - - - - - - - 798.7142857142857 3 7 RAF1 v-raf-1 murine leukemia viral oncogene homolog 1 999 126 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1966.[MT7]-VVDPTPEQFQAFR.2y8_1.heavy 839.44 / 1022.51 3727.0 32.67373402913412 39 20 10 5 4 3.677865251176678 27.1896856384302 0.04840087890625 7 0.9949902316976645 17.42898407799055 3727.0 13.38406162455322 0.0 - - - - - - - 311.0 7 5 RAF1 v-raf-1 murine leukemia viral oncogene homolog 1 1001 126 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1966.[MT7]-VVDPTPEQFQAFR.2y10_1.heavy 839.44 / 1220.61 12424.0 32.67373402913412 39 20 10 5 4 3.677865251176678 27.1896856384302 0.04840087890625 7 0.9949902316976645 17.42898407799055 12424.0 58.35705215630841 0.0 - - - - - - - 311.0 24 4 RAF1 v-raf-1 murine leukemia viral oncogene homolog 1 1003 126 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1966.[MT7]-VVDPTPEQFQAFR.2y9_1.heavy 839.44 / 1123.55 N/A 32.67373402913412 39 20 10 5 4 3.677865251176678 27.1896856384302 0.04840087890625 7 0.9949902316976645 17.42898407799055 311.0 0.8012882447665056 27.0 - - - - - - - 311.0 4 4 RAF1 v-raf-1 murine leukemia viral oncogene homolog 1 1005 127 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1965.[MT7]-ESEDFIVEQYK[MT7].3b6_1.heavy 558.954 / 865.406 10000.0 30.343850135803223 38 13 10 5 10 2.1330371820009146 36.082047457538025 0.04889869689941406 3 0.9230264663444163 4.4194245586941685 10000.0 31.530405123803472 0.0 - - - - - - - 333.0 20 3 MCM6 minichromosome maintenance complex component 6 1007 127 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1965.[MT7]-ESEDFIVEQYK[MT7].3b4_1.heavy 558.954 / 605.253 28000.0 30.343850135803223 38 13 10 5 10 2.1330371820009146 36.082047457538025 0.04889869689941406 3 0.9230264663444163 4.4194245586941685 28000.0 35.02950122653639 0.0 - - - - - - - 333.0 56 2 MCM6 minichromosome maintenance complex component 6 1009 127 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1965.[MT7]-ESEDFIVEQYK[MT7].3b5_1.heavy 558.954 / 752.322 33333.0 30.343850135803223 38 13 10 5 10 2.1330371820009146 36.082047457538025 0.04889869689941406 3 0.9230264663444163 4.4194245586941685 33333.0 61.332719999999995 0.0 - - - - - - - 333.0 66 5 MCM6 minichromosome maintenance complex component 6 1011 127 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1965.[MT7]-ESEDFIVEQYK[MT7].3y4_1.heavy 558.954 / 711.379 10333.0 30.343850135803223 38 13 10 5 10 2.1330371820009146 36.082047457538025 0.04889869689941406 3 0.9230264663444163 4.4194245586941685 10333.0 39.490895228228226 0.0 - - - - - - - 333.0 20 6 MCM6 minichromosome maintenance complex component 6 1013 128 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1968.[MT7]-EWTLEAGALVLADR.3b5_1.heavy 563.309 / 803.406 3988.0 40.63359832763672 40 10 10 10 10 2.6251293046048736 38.09336165825618 0.0 3 0.8411681758281886 3.0547113271036297 3988.0 9.83498746867168 1.0 - - - - - - - 365.6666666666667 9 6 MCM2 minichromosome maintenance complex component 2 1015 128 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1968.[MT7]-EWTLEAGALVLADR.3b3_1.heavy 563.309 / 561.279 6380.0 40.63359832763672 40 10 10 10 10 2.6251293046048736 38.09336165825618 0.0 3 0.8411681758281886 3.0547113271036297 6380.0 20.257533465771452 0.0 - - - - - - - 313.2857142857143 12 7 MCM2 minichromosome maintenance complex component 2 1017 128 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1968.[MT7]-EWTLEAGALVLADR.3b7_1.heavy 563.309 / 931.464 7178.0 40.63359832763672 40 10 10 10 10 2.6251293046048736 38.09336165825618 0.0 3 0.8411681758281886 3.0547113271036297 7178.0 44.70553972871878 0.0 - - - - - - - 299.0 14 6 MCM2 minichromosome maintenance complex component 2 1019 128 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1968.[MT7]-EWTLEAGALVLADR.3y5_1.heavy 563.309 / 573.336 21933.0 40.63359832763672 40 10 10 10 10 2.6251293046048736 38.09336165825618 0.0 3 0.8411681758281886 3.0547113271036297 21933.0 108.73118009605068 0.0 - - - - - - - 319.0 43 5 MCM2 minichromosome maintenance complex component 2 1021 129 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1967.[MT7]-SIC[CAM]TTVLELLDK[MT7].3b6_1.heavy 560.655 / 806.42 63298.0 44.54199981689453 48 18 10 10 10 17.502768159169502 5.713381968532282 0.0 3 0.9869045513643842 10.77276278808648 63298.0 293.06015846736045 0.0 - - - - - - - 264.0 126 5 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 1023 129 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1967.[MT7]-SIC[CAM]TTVLELLDK[MT7].3y3_1.heavy 560.655 / 519.326 129503.0 44.54199981689453 48 18 10 10 10 17.502768159169502 5.713381968532282 0.0 3 0.9869045513643842 10.77276278808648 129503.0 295.6922743657506 0.0 - - - - - - - 396.0 259 2 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 1025 129 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1967.[MT7]-SIC[CAM]TTVLELLDK[MT7].3b5_1.heavy 560.655 / 707.351 45722.0 44.54199981689453 48 18 10 10 10 17.502768159169502 5.713381968532282 0.0 3 0.9869045513643842 10.77276278808648 45722.0 158.68778516565402 0.0 - - - - - - - 293.3333333333333 91 9 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 1027 129 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1967.[MT7]-SIC[CAM]TTVLELLDK[MT7].3y4_1.heavy 560.655 / 632.41 66734.0 44.54199981689453 48 18 10 10 10 17.502768159169502 5.713381968532282 0.0 3 0.9869045513643842 10.77276278808648 66734.0 529.0424902830805 0.0 - - - - - - - 242.0 133 6 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 1029 130 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1560.[MT7]-AAAEER.2y4_1.heavy 395.712 / 504.241 17601.0 13.53427505493164 34 11 10 5 8 0.8609939334688885 76.11124982877118 0.04829978942871094 4 0.8783971274274154 3.5025791545581533 17601.0 38.90024231582371 0.0 - - - - - - - 171.42857142857142 35 28 WEE1 WEE1 homolog (S. pombe) 1031 130 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1560.[MT7]-AAAEER.2y5_1.heavy 395.712 / 575.278 32268.0 13.53427505493164 34 11 10 5 8 0.8609939334688885 76.11124982877118 0.04829978942871094 4 0.8783971274274154 3.5025791545581533 32268.0 54.116839070812084 0.0 - - - - - - - 171.93333333333334 64 30 WEE1 WEE1 homolog (S. pombe) 1033 130 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1560.[MT7]-AAAEER.2b4_1.heavy 395.712 / 487.263 12807.0 13.53427505493164 34 11 10 5 8 0.8609939334688885 76.11124982877118 0.04829978942871094 4 0.8783971274274154 3.5025791545581533 12807.0 5.390864771263141 2.0 - - - - - - - 201.5185185185185 45 27 WEE1 WEE1 homolog (S. pombe) 1035 130 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1560.[MT7]-AAAEER.2b5_1.heavy 395.712 / 616.306 644.0 13.53427505493164 34 11 10 5 8 0.8609939334688885 76.11124982877118 0.04829978942871094 4 0.8783971274274154 3.5025791545581533 644.0 -0.094775570272259 29.0 - - - - - - - 224.3 60 30 WEE1 WEE1 homolog (S. pombe) 1037 131 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2441.[MT7]-TALALEVGELVK[MT7].3y3_1.heavy 510.983 / 503.367 75161.0 38.52730178833008 47 17 10 10 10 5.191546808143489 19.262081937340806 0.0 3 0.9738684933747661 7.617804980920156 75161.0 140.13709230234548 0.0 - - - - - - - 316.7142857142857 150 7 CRK v-crk sarcoma virus CT10 oncogene homolog (avian) 1039 131 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2441.[MT7]-TALALEVGELVK[MT7].3b6_1.heavy 510.983 / 743.442 108197.0 38.52730178833008 47 17 10 10 10 5.191546808143489 19.262081937340806 0.0 3 0.9738684933747661 7.617804980920156 108197.0 273.5102097785326 0.0 - - - - - - - 332.5 216 2 CRK v-crk sarcoma virus CT10 oncogene homolog (avian) 1041 131 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2441.[MT7]-TALALEVGELVK[MT7].3b4_1.heavy 510.983 / 501.315 108862.0 38.52730178833008 47 17 10 10 10 5.191546808143489 19.262081937340806 0.0 3 0.9738684933747661 7.617804980920156 108862.0 20.50519502646215 1.0 - - - - - - - 443.0 261 5 CRK v-crk sarcoma virus CT10 oncogene homolog (avian) 1043 131 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2441.[MT7]-TALALEVGELVK[MT7].3b5_1.heavy 510.983 / 614.399 90238.0 38.52730178833008 47 17 10 10 10 5.191546808143489 19.262081937340806 0.0 3 0.9738684933747661 7.617804980920156 90238.0 411.68718881242864 0.0 - - - - - - - 332.5 180 4 CRK v-crk sarcoma virus CT10 oncogene homolog (avian) 1045 132 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1962.[MT7]-VAAGVLC[CAM]ELAQDK[MT7].2y4_1.heavy 831.46 / 605.338 2627.0 35.34149932861328 44 14 10 10 10 1.5335697595915954 43.744188237152215 0.0 3 0.9348286637871493 4.8078037227107435 2627.0 7.070103456611072 0.0 - - - - - - - 656.5 5 8 CTNNB1;JUP catenin (cadherin-associated protein), beta 1, 88kDa;junction plakoglobin 1047 132 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1962.[MT7]-VAAGVLC[CAM]ELAQDK[MT7].2y8_1.heavy 831.46 / 1120.58 2627.0 35.34149932861328 44 14 10 10 10 1.5335697595915954 43.744188237152215 0.0 3 0.9348286637871493 4.8078037227107435 2627.0 13.993162846279198 0.0 - - - - - - - 263.0 5 3 CTNNB1;JUP catenin (cadherin-associated protein), beta 1, 88kDa;junction plakoglobin 1049 132 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1962.[MT7]-VAAGVLC[CAM]ELAQDK[MT7].2y3_1.heavy 831.46 / 534.3 2364.0 35.34149932861328 44 14 10 10 10 1.5335697595915954 43.744188237152215 0.0 3 0.9348286637871493 4.8078037227107435 2364.0 2.9699149109691447 0.0 - - - - - - - 675.2857142857143 4 7 CTNNB1;JUP catenin (cadherin-associated protein), beta 1, 88kDa;junction plakoglobin 1051 132 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1962.[MT7]-VAAGVLC[CAM]ELAQDK[MT7].2b5_1.heavy 831.46 / 542.342 4466.0 35.34149932861328 44 14 10 10 10 1.5335697595915954 43.744188237152215 0.0 3 0.9348286637871493 4.8078037227107435 4466.0 4.334010152284264 1.0 - - - - - - - 671.1111111111111 8 9 CTNNB1;JUP catenin (cadherin-associated protein), beta 1, 88kDa;junction plakoglobin 1053 133 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1961.[MT7]-LFSANDVENIFSR.2y5_1.heavy 828.429 / 636.346 2206.0 40.572349548339844 45 20 10 5 10 5.101974548478526 15.476142025710587 0.04109954833984375 3 0.9953802815181073 18.15044508239659 2206.0 8.87254256385614 2.0 - - - - - - - 378.77777777777777 4 9 SOS1 son of sevenless homolog 1 (Drosophila) 1055 133 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1961.[MT7]-LFSANDVENIFSR.2b6_1.heavy 828.429 / 792.401 2406.0 40.572349548339844 45 20 10 5 10 5.101974548478526 15.476142025710587 0.04109954833984375 3 0.9953802815181073 18.15044508239659 2406.0 3.06 0.0 - - - - - - - 321.0 4 10 SOS1 son of sevenless homolog 1 (Drosophila) 1057 133 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1961.[MT7]-LFSANDVENIFSR.2y10_1.heavy 828.429 / 1164.56 3209.0 40.572349548339844 45 20 10 5 10 5.101974548478526 15.476142025710587 0.04109954833984375 3 0.9953802815181073 18.15044508239659 3209.0 21.189127617725326 0.0 - - - - - - - 251.0 6 4 SOS1 son of sevenless homolog 1 (Drosophila) 1059 133 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1961.[MT7]-LFSANDVENIFSR.2y7_1.heavy 828.429 / 864.457 4813.0 40.572349548339844 45 20 10 5 10 5.101974548478526 15.476142025710587 0.04109954833984375 3 0.9953802815181073 18.15044508239659 4813.0 12.002493765586035 0.0 - - - - - - - 312.1111111111111 9 9 SOS1 son of sevenless homolog 1 (Drosophila) 1061 134 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1963.[MT7]-HLQINQTFEELR.2b3_1.heavy 836.45 / 523.311 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 1063 134 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1963.[MT7]-HLQINQTFEELR.2y8_1.heavy 836.45 / 1036.51 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 1065 134 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1963.[MT7]-HLQINQTFEELR.2y9_1.heavy 836.45 / 1149.59 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 1067 134 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1963.[MT7]-HLQINQTFEELR.2b5_1.heavy 836.45 / 750.438 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 1069 135 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1558.[MT7]-AFAGK[MT7].2b3_1.heavy 391.244 / 434.252 11641.0 19.131099700927734 46 16 10 10 10 3.2325341936101477 30.93548096031688 0.0 3 0.9662104013396257 6.694841812855845 11641.0 21.759790747291174 0.0 - - - - - - - 281.0 23 10 ANAPC5 anaphase promoting complex subunit 5 1071 135 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1558.[MT7]-AFAGK[MT7].2y4_1.heavy 391.244 / 566.342 68640.0 19.131099700927734 46 16 10 10 10 3.2325341936101477 30.93548096031688 0.0 3 0.9662104013396257 6.694841812855845 68640.0 41.38954416288354 0.0 - - - - - - - 267.6666666666667 137 3 ANAPC5 anaphase promoting complex subunit 5 1073 135 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1558.[MT7]-AFAGK[MT7].2y3_1.heavy 391.244 / 419.273 35524.0 19.131099700927734 46 16 10 10 10 3.2325341936101477 30.93548096031688 0.0 3 0.9662104013396257 6.694841812855845 35524.0 47.642280898458026 0.0 - - - - - - - 312.1111111111111 71 9 ANAPC5 anaphase promoting complex subunit 5 1075 135 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1558.[MT7]-AFAGK[MT7].2y2_1.heavy 391.244 / 348.236 32514.0 19.131099700927734 46 16 10 10 10 3.2325341936101477 30.93548096031688 0.0 3 0.9662104013396257 6.694841812855845 32514.0 52.241093079638745 0.0 - - - - - - - 1142.6923076923076 65 13 ANAPC5 anaphase promoting complex subunit 5 1077 136 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1827.[MT7]-K[MT7]PSATQQK[MT7].2y4_1.heavy 660.404 / 648.38 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE2E3 ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) 1079 136 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1827.[MT7]-K[MT7]PSATQQK[MT7].2y5_1.heavy 660.404 / 719.417 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE2E3 ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) 1081 136 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1827.[MT7]-K[MT7]PSATQQK[MT7].2b7_1.heavy 660.404 / 1029.59 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE2E3 ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) 1083 136 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1827.[MT7]-K[MT7]PSATQQK[MT7].2y7_1.heavy 660.404 / 903.502 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE2E3 ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) 1085 137 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1559.[MT7]-IVSGLR.2y4_1.heavy 394.759 / 432.257 13645.0 24.755599975585938 42 20 6 10 6 3.087496000642689 24.41562101401342 0.0 5 0.9919887302594907 13.779115105613585 13645.0 48.31618302781513 0.0 - - - - - - - 609.5714285714286 27 7 BTRC beta-transducin repeat containing 1087 137 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1559.[MT7]-IVSGLR.2y5_1.heavy 394.759 / 531.325 42925.0 24.755599975585938 42 20 6 10 6 3.087496000642689 24.41562101401342 0.0 5 0.9919887302594907 13.779115105613585 42925.0 40.78542561333356 1.0 - - - - - - - 711.0 130 8 BTRC beta-transducin repeat containing 1089 137 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1559.[MT7]-IVSGLR.2b4_1.heavy 394.759 / 501.315 10234.0 24.755599975585938 42 20 6 10 6 3.087496000642689 24.41562101401342 0.0 5 0.9919887302594907 13.779115105613585 10234.0 17.396600234466586 1.0 - - - - - - - 284.0 20 6 BTRC beta-transducin repeat containing 1091 137 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1559.[MT7]-IVSGLR.2b5_1.heavy 394.759 / 614.399 6538.0 24.755599975585938 42 20 6 10 6 3.087496000642689 24.41562101401342 0.0 5 0.9919887302594907 13.779115105613585 6538.0 2.8936421949600186 1.0 - - - - - - - 284.0 17 4 BTRC beta-transducin repeat containing 1093 138 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1698.[MT7]-SSWYWGR.2y4_1.heavy 543.268 / 581.283 11034.0 31.870899200439453 45 15 10 10 10 1.8065993421368494 50.523113655238944 0.0 3 0.952376754776463 5.632667107138113 11034.0 26.5171670837776 0.0 - - - - - - - 325.0 22 7 CRK v-crk sarcoma virus CT10 oncogene homolog (avian) 1095 138 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1698.[MT7]-SSWYWGR.2b3_1.heavy 543.268 / 505.253 10385.0 31.870899200439453 45 15 10 10 10 1.8065993421368494 50.523113655238944 0.0 3 0.952376754776463 5.632667107138113 10385.0 14.801425269645609 0.0 - - - - - - - 325.0 20 2 CRK v-crk sarcoma virus CT10 oncogene homolog (avian) 1097 138 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1698.[MT7]-SSWYWGR.2b6_1.heavy 543.268 / 911.417 2272.0 31.870899200439453 45 15 10 10 10 1.8065993421368494 50.523113655238944 0.0 3 0.952376754776463 5.632667107138113 2272.0 3.3452072527244137 1.0 - - - - - - - 325.0 5 3 CRK v-crk sarcoma virus CT10 oncogene homolog (avian) 1099 138 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1698.[MT7]-SSWYWGR.2y1_1.heavy 543.268 / 175.119 N/A 31.870899200439453 45 15 10 10 10 1.8065993421368494 50.523113655238944 0.0 3 0.952376754776463 5.632667107138113 6815.0 2.8176348228043144 12.0 - - - - - - - 325.0 13 1 CRK v-crk sarcoma virus CT10 oncogene homolog (avian) 1101 139 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1828.[MT7]-EAK[MT7]PSATGK[MT7].3y3_1.heavy 440.933 / 449.284 7120.0 14.724699974060059 50 20 10 10 10 13.099621343091414 7.633808442313397 0.0 3 0.9973443024716726 23.942908472764785 7120.0 18.037333333333336 1.0 - - - - - - - 230.76923076923077 14 13 CCNB1 cyclin B1 1103 139 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1828.[MT7]-EAK[MT7]PSATGK[MT7].3y6_1.heavy 440.933 / 704.406 15990.0 14.724699974060059 50 20 10 10 10 13.099621343091414 7.633808442313397 0.0 3 0.9973443024716726 23.942908472764785 15990.0 71.64544179343476 0.0 - - - - - - - 156.25 31 4 CCNB1 cyclin B1 1105 139 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1828.[MT7]-EAK[MT7]PSATGK[MT7].3y4_1.heavy 440.933 / 520.321 4997.0 14.724699974060059 50 20 10 10 10 13.099621343091414 7.633808442313397 0.0 3 0.9973443024716726 23.942908472764785 4997.0 39.496288 1.0 - - - - - - - 285.7142857142857 9 7 CCNB1 cyclin B1 1107 139 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1828.[MT7]-EAK[MT7]PSATGK[MT7].3y5_1.heavy 440.933 / 607.353 3997.0 14.724699974060059 50 20 10 10 10 13.099621343091414 7.633808442313397 0.0 3 0.9973443024716726 23.942908472764785 3997.0 35.17359999999999 1.0 - - - - - - - 187.5 29 10 CCNB1 cyclin B1 1109 140 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1829.[MT7]-LVFSNVNLK[MT7].2y4_1.heavy 661.408 / 617.41 3235.0 33.7679500579834 40 15 10 5 10 4.3126733420937935 23.187473770376084 0.045902252197265625 3 0.9532133374352247 5.683205451120632 3235.0 5.914328231292516 7.0 - - - - - - - 294.0 8 4 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 1111 140 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1829.[MT7]-LVFSNVNLK[MT7].2y8_1.heavy 661.408 / 1064.62 30875.0 33.7679500579834 40 15 10 5 10 4.3126733420937935 23.187473770376084 0.045902252197265625 3 0.9532133374352247 5.683205451120632 30875.0 67.84098639455783 0.0 - - - - - - - 294.0 61 6 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 1113 140 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1829.[MT7]-LVFSNVNLK[MT7].2y6_1.heavy 661.408 / 818.485 12056.0 33.7679500579834 40 15 10 5 10 4.3126733420937935 23.187473770376084 0.045902252197265625 3 0.9532133374352247 5.683205451120632 12056.0 32.46371882086168 0.0 - - - - - - - 714.0 24 7 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 1115 140 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1829.[MT7]-LVFSNVNLK[MT7].2y7_1.heavy 661.408 / 965.554 15585.0 33.7679500579834 40 15 10 5 10 4.3126733420937935 23.187473770376084 0.045902252197265625 3 0.9532133374352247 5.683205451120632 15585.0 76.33469387755102 0.0 - - - - - - - 294.0 31 2 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 1117 141 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1693.[MT7]-LC[CAM]DVQPFLPVLR.3y7_1.heavy 534.305 / 841.529 7853.0 41.2546501159668 46 20 10 6 10 11.647742914731326 8.585354324186392 0.039398193359375 3 0.9975714404802943 25.038024625501276 7853.0 77.30296874999999 0.0 - - - - - - - 219.28571428571428 15 7 PIK3CD phosphoinositide-3-kinase, catalytic, delta polypeptide 1119 141 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1693.[MT7]-LC[CAM]DVQPFLPVLR.3b4_1.heavy 534.305 / 632.319 4789.0 41.2546501159668 46 20 10 6 10 11.647742914731326 8.585354324186392 0.039398193359375 3 0.9975714404802943 25.038024625501276 4789.0 7.412260869565217 1.0 - - - - - - - 268.4 9 5 PIK3CD phosphoinositide-3-kinase, catalytic, delta polypeptide 1121 141 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1693.[MT7]-LC[CAM]DVQPFLPVLR.3b5_1.heavy 534.305 / 760.378 3065.0 41.2546501159668 46 20 10 6 10 11.647742914731326 8.585354324186392 0.039398193359375 3 0.9975714404802943 25.038024625501276 3065.0 6.058949227321491 1.0 - - - - - - - 255.66666666666666 6 3 PIK3CD phosphoinositide-3-kinase, catalytic, delta polypeptide 1123 141 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1693.[MT7]-LC[CAM]DVQPFLPVLR.3b3_1.heavy 534.305 / 533.251 13791.0 41.2546501159668 46 20 10 6 10 11.647742914731326 8.585354324186392 0.039398193359375 3 0.9975714404802943 25.038024625501276 13791.0 45.57026086956522 0.0 - - - - - - - 306.6 27 5 PIK3CD phosphoinositide-3-kinase, catalytic, delta polypeptide 1125 142 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2247.[MT7]-ILDFGLAR.2y5_1.heavy 524.817 / 563.33 103718.0 37.495399475097656 50 20 10 10 10 6.266170727913429 15.958709767440217 0.0 3 0.993436577393915 15.225072205135469 103718.0 484.8521846590909 0.0 - - - - - - - 281.8 207 5 LOC100509672;LOC100509694;MAPK14;MAPK8;MAPK11;MAPK9;MAPK10;MAPK13;MAPK12 mitogen-activated protein kinase 12-like;mitogen-activated protein kinase 12-like;mitogen-activated protein kinase 14;mitogen-activated protein kinase 8;mitogen-activated protein kinase 11;mitogen-activated protein kinase 9;mitogen-activated protein kinase 10;mitogen-activated protein kinase 13;mitogen-activated protein kinase 12 1127 142 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2247.[MT7]-ILDFGLAR.2y6_1.heavy 524.817 / 678.357 40361.0 37.495399475097656 50 20 10 10 10 6.266170727913429 15.958709767440217 0.0 3 0.993436577393915 15.225072205135469 40361.0 99.81106688970588 0.0 - - - - - - - 328.6 80 5 LOC100509672;LOC100509694;MAPK14;MAPK8;MAPK11;MAPK9;MAPK10;MAPK13;MAPK12 mitogen-activated protein kinase 12-like;mitogen-activated protein kinase 12-like;mitogen-activated protein kinase 14;mitogen-activated protein kinase 8;mitogen-activated protein kinase 11;mitogen-activated protein kinase 9;mitogen-activated protein kinase 10;mitogen-activated protein kinase 13;mitogen-activated protein kinase 12 1129 142 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2247.[MT7]-ILDFGLAR.2b5_1.heavy 524.817 / 690.394 19007.0 37.495399475097656 50 20 10 10 10 6.266170727913429 15.958709767440217 0.0 3 0.993436577393915 15.225072205135469 19007.0 74.56904051172708 0.0 - - - - - - - 339.0 38 9 LOC100509672;LOC100509694;MAPK14;MAPK8;MAPK11;MAPK9;MAPK10;MAPK13;MAPK12 mitogen-activated protein kinase 12-like;mitogen-activated protein kinase 12-like;mitogen-activated protein kinase 14;mitogen-activated protein kinase 8;mitogen-activated protein kinase 11;mitogen-activated protein kinase 9;mitogen-activated protein kinase 10;mitogen-activated protein kinase 13;mitogen-activated protein kinase 12 1131 142 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2247.[MT7]-ILDFGLAR.2y7_1.heavy 524.817 / 791.441 85650.0 37.495399475097656 50 20 10 10 10 6.266170727913429 15.958709767440217 0.0 3 0.993436577393915 15.225072205135469 85650.0 210.19152361164953 0.0 - - - - - - - 391.0 171 9 LOC100509672;LOC100509694;MAPK14;MAPK8;MAPK11;MAPK9;MAPK10;MAPK13;MAPK12 mitogen-activated protein kinase 12-like;mitogen-activated protein kinase 12-like;mitogen-activated protein kinase 14;mitogen-activated protein kinase 8;mitogen-activated protein kinase 11;mitogen-activated protein kinase 9;mitogen-activated protein kinase 10;mitogen-activated protein kinase 13;mitogen-activated protein kinase 12 1133 143 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1694.[MT7]-C[CAM]VEFVK[MT7].2b3_1.heavy 535.301 / 533.251 10189.0 25.75029945373535 50 20 10 10 10 8.006950467364682 12.489149321903184 0.0 3 0.9960692577679852 19.678080207194533 10189.0 9.691349887938673 0.0 - - - - - - - 786.5 20 8 HDAC1 histone deacetylase 1 1135 143 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1694.[MT7]-C[CAM]VEFVK[MT7].2y4_1.heavy 535.301 / 666.394 16782.0 25.75029945373535 50 20 10 10 10 8.006950467364682 12.489149321903184 0.0 3 0.9960692577679852 19.678080207194533 16782.0 23.871853610116094 0.0 - - - - - - - 749.0 33 8 HDAC1 histone deacetylase 1 1137 143 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1694.[MT7]-C[CAM]VEFVK[MT7].2y5_1.heavy 535.301 / 765.463 13785.0 25.75029945373535 50 20 10 10 10 8.006950467364682 12.489149321903184 0.0 3 0.9960692577679852 19.678080207194533 13785.0 44.18564273789649 0.0 - - - - - - - 300.0 27 2 HDAC1 histone deacetylase 1 1139 143 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1694.[MT7]-C[CAM]VEFVK[MT7].2y3_1.heavy 535.301 / 537.352 15284.0 25.75029945373535 50 20 10 10 10 8.006950467364682 12.489149321903184 0.0 3 0.9960692577679852 19.678080207194533 15284.0 49.11803005008347 0.0 - - - - - - - 699.0 30 9 HDAC1 histone deacetylase 1 1141 144 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1824.[MT7]-IAPYSVEIK[MT7].2y8_1.heavy 654.394 / 1050.6 N/A N/A - - - - - - - - - 0.0 - - - - - - - PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 1143 144 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1824.[MT7]-IAPYSVEIK[MT7].2b6_1.heavy 654.394 / 775.447 N/A N/A - - - - - - - - - 0.0 - - - - - - - PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 1145 144 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1824.[MT7]-IAPYSVEIK[MT7].2y6_1.heavy 654.394 / 882.505 N/A N/A - - - - - - - - - 0.0 - - - - - - - PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 1147 144 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1824.[MT7]-IAPYSVEIK[MT7].2y7_1.heavy 654.394 / 979.558 N/A N/A - - - - - - - - - 0.0 - - - - - - - PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 1149 145 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1695.[MT7]-FFNLLK[MT7].2y4_1.heavy 535.336 / 631.426 24766.0 38.5483512878418 40 15 10 5 10 2.1219031432424273 37.570603777730796 0.0420989990234375 3 0.9592172405546672 6.090275337608266 24766.0 123.70194213538582 0.0 - - - - - - - 375.0 49 6 RB1 retinoblastoma 1 1151 145 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1695.[MT7]-FFNLLK[MT7].2b3_1.heavy 535.336 / 553.289 22064.0 38.5483512878418 40 15 10 5 10 2.1219031432424273 37.570603777730796 0.0420989990234375 3 0.9592172405546672 6.090275337608266 22064.0 116.08964673376751 0.0 - - - - - - - 337.5 44 4 RB1 retinoblastoma 1 1153 145 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1695.[MT7]-FFNLLK[MT7].2y5_1.heavy 535.336 / 778.494 43678.0 38.5483512878418 40 15 10 5 10 2.1219031432424273 37.570603777730796 0.0420989990234375 3 0.9592172405546672 6.090275337608266 43678.0 139.7200454803305 0.0 - - - - - - - 337.5 87 6 RB1 retinoblastoma 1 1155 145 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1695.[MT7]-FFNLLK[MT7].2y3_1.heavy 535.336 / 517.383 15310.0 38.5483512878418 40 15 10 5 10 2.1219031432424273 37.570603777730796 0.0420989990234375 3 0.9592172405546672 6.090275337608266 15310.0 17.950195886888245 0.0 - - - - - - - 375.0 30 9 RB1 retinoblastoma 1 1157 146 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2451.[MT7]-VPEPGVPTETIK[MT7].3y6_1.heavy 518.971 / 832.49 10580.0 26.94860076904297 45 15 10 10 10 3.4461302844452733 29.018055542289833 0.0 3 0.9573086348536909 5.95161814887546 10580.0 42.55105912526473 0.0 - - - - - - - 321.0 21 2 CDK6 cyclin-dependent kinase 6 1159 146 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2451.[MT7]-VPEPGVPTETIK[MT7].3y3_1.heavy 518.971 / 505.347 22442.0 26.94860076904297 45 15 10 10 10 3.4461302844452733 29.018055542289833 0.0 3 0.9573086348536909 5.95161814887546 22442.0 29.19491419656786 0.0 - - - - - - - 681.125 44 8 CDK6 cyclin-dependent kinase 6 1161 146 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2451.[MT7]-VPEPGVPTETIK[MT7].3b5_1.heavy 518.971 / 624.347 24045.0 26.94860076904297 45 15 10 10 10 3.4461302844452733 29.018055542289833 0.0 3 0.9573086348536909 5.95161814887546 24045.0 59.25639876946429 0.0 - - - - - - - 321.0 48 5 CDK6 cyclin-dependent kinase 6 1163 146 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2451.[MT7]-VPEPGVPTETIK[MT7].3y5_1.heavy 518.971 / 735.437 9939.0 26.94860076904297 45 15 10 10 10 3.4461302844452733 29.018055542289833 0.0 3 0.9573086348536909 5.95161814887546 9939.0 28.607350847128245 1.0 - - - - - - - 321.0 21 4 CDK6 cyclin-dependent kinase 6 1165 147 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1825.[MT7]-LALLHEGTGPR.2y8_1.heavy 654.381 / 866.448 6105.0 27.372100830078125 36 14 6 10 6 2.654452085177239 37.67255794836581 0.0 6 0.9311408943389742 4.675817103849563 6105.0 27.752500690396943 0.0 - - - - - - - 321.0 12 3 SMC3 structural maintenance of chromosomes 3 1167 147 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1825.[MT7]-LALLHEGTGPR.2y6_1.heavy 654.381 / 616.305 3213.0 27.372100830078125 36 14 6 10 6 2.654452085177239 37.67255794836581 0.0 6 0.9311408943389742 4.675817103849563 3213.0 4.08336365984791 8.0 - - - - - - - 321.0 32 3 SMC3 structural maintenance of chromosomes 3 1169 147 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1825.[MT7]-LALLHEGTGPR.2y10_1.heavy 654.381 / 1050.57 4820.0 27.372100830078125 36 14 6 10 6 2.654452085177239 37.67255794836581 0.0 6 0.9311408943389742 4.675817103849563 4820.0 4.040022407568779 4.0 - - - - - - - 321.0 41 4 SMC3 structural maintenance of chromosomes 3 1171 147 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1825.[MT7]-LALLHEGTGPR.2y7_1.heavy 654.381 / 753.364 12532.0 27.372100830078125 36 14 6 10 6 2.654452085177239 37.67255794836581 0.0 6 0.9311408943389742 4.675817103849563 12532.0 72.61532710280373 0.0 - - - - - - - 321.0 25 3 SMC3 structural maintenance of chromosomes 3 1173 148 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1696.[MT7]-FVDFQK[MT7].2y4_1.heavy 536.307 / 681.369 24333.0 29.265650749206543 45 20 10 5 10 11.950987913182882 8.36750909016418 0.04829978942871094 3 0.9981144845443108 28.41705440407476 24333.0 94.36052418918919 0.0 - - - - - - - 333.0 48 2 MCM6 minichromosome maintenance complex component 6 1175 148 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1696.[MT7]-FVDFQK[MT7].2b3_1.heavy 536.307 / 506.273 26333.0 29.265650749206543 45 20 10 5 10 11.950987913182882 8.36750909016418 0.04829978942871094 3 0.9981144845443108 28.41705440407476 26333.0 73.43235382308846 0.0 - - - - - - - 333.0 52 4 MCM6 minichromosome maintenance complex component 6 1177 148 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1696.[MT7]-FVDFQK[MT7].2y5_1.heavy 536.307 / 780.437 18667.0 29.265650749206543 45 20 10 5 10 11.950987913182882 8.36750909016418 0.04829978942871094 3 0.9981144845443108 28.41705440407476 18667.0 81.18885607196401 0.0 - - - - - - - 333.0 37 5 MCM6 minichromosome maintenance complex component 6 1179 148 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1696.[MT7]-FVDFQK[MT7].2y3_1.heavy 536.307 / 566.342 36667.0 29.265650749206543 45 20 10 5 10 11.950987913182882 8.36750909016418 0.04829978942871094 3 0.9981144845443108 28.41705440407476 36667.0 118.54011666666666 0.0 - - - - - - - 333.0 73 6 MCM6 minichromosome maintenance complex component 6 1181 149 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1550.[MT7]-VILVR.2b3_1.heavy 372.267 / 470.346 68367.0 26.762800216674805 50 20 10 10 10 16.924127729976863 5.908724017892809 0.0 3 0.9956738690251242 18.756674667421755 68367.0 242.63534645366647 0.0 - - - - - - - 317.0 136 1 AKT3;AKT2 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 2 1183 149 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1550.[MT7]-VILVR.2y4_1.heavy 372.267 / 500.355 143697.0 26.762800216674805 50 20 10 10 10 16.924127729976863 5.908724017892809 0.0 3 0.9956738690251242 18.756674667421755 143697.0 233.49546377792825 0.0 - - - - - - - 317.0 287 5 AKT3;AKT2 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 2 1185 149 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1550.[MT7]-VILVR.2b4_1.heavy 372.267 / 569.414 20890.0 26.762800216674805 50 20 10 10 10 16.924127729976863 5.908724017892809 0.0 3 0.9956738690251242 18.756674667421755 20890.0 40.240736842105264 0.0 - - - - - - - 751.875 41 8 AKT3;AKT2 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 2 1187 149 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1550.[MT7]-VILVR.2y3_1.heavy 372.267 / 387.271 44628.0 26.762800216674805 50 20 10 10 10 16.924127729976863 5.908724017892809 0.0 3 0.9956738690251242 18.756674667421755 44628.0 266.36017665615145 0.0 - - - - - - - 317.0 89 3 AKT3;AKT2 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 2 1189 150 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1551.[MT7]-NVVGAR.2y4_1.heavy 380.233 / 402.246 56657.0 16.123300552368164 33 13 2 10 8 1.146965248031963 51.81207902631081 0.0 4 0.9284552984026646 4.586165195053519 56657.0 87.00915211308696 0.0 - - - - - - - 791.5 113 10 YWHAB;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 1191 150 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1551.[MT7]-NVVGAR.2y5_1.heavy 380.233 / 501.314 66591.0 16.123300552368164 33 13 2 10 8 1.146965248031963 51.81207902631081 0.0 4 0.9284552984026646 4.586165195053519 66591.0 83.9421493707262 1.0 - - - - - - - 288.0 385 7 YWHAB;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 1193 150 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1551.[MT7]-NVVGAR.2b4_1.heavy 380.233 / 514.311 25302.0 16.123300552368164 33 13 2 10 8 1.146965248031963 51.81207902631081 0.0 4 0.9284552984026646 4.586165195053519 25302.0 107.29579414699036 0.0 - - - - - - - 325.9 50 10 YWHAB;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 1195 150 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1551.[MT7]-NVVGAR.2y1_1.heavy 380.233 / 175.119 47033.0 16.123300552368164 33 13 2 10 8 1.146965248031963 51.81207902631081 0.0 4 0.9284552984026646 4.586165195053519 47033.0 26.903945432908667 0.0 - - - - - - - 879.3333333333334 94 3 YWHAB;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 1197 151 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1552.[MT7]-TIDIR.2b3_1.heavy 381.236 / 474.268 235323.0 23.140124797821045 39 17 10 2 10 7.8058714077679605 12.810869507853495 0.08180046081542969 3 0.9788538400487092 8.471851291843661 235323.0 247.79271015622953 0.0 - - - - - - - 259.0 470 2 ORC1 origin recognition complex, subunit 1 1199 151 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1552.[MT7]-TIDIR.2y4_1.heavy 381.236 / 516.314 10861.0 23.140124797821045 39 17 10 2 10 7.8058714077679605 12.810869507853495 0.08180046081542969 3 0.9788538400487092 8.471851291843661 10861.0 23.526065811892934 0.0 - - - - - - - 259.0 21 5 ORC1 origin recognition complex, subunit 1 1201 151 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1552.[MT7]-TIDIR.2y2_1.heavy 381.236 / 288.203 284198.0 23.140124797821045 39 17 10 2 10 7.8058714077679605 12.810869507853495 0.08180046081542969 3 0.9788538400487092 8.471851291843661 284198.0 86.83601796356199 0.0 - - - - - - - 259.0 568 1 ORC1 origin recognition complex, subunit 1 1203 151 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1552.[MT7]-TIDIR.2y3_1.heavy 381.236 / 403.23 2069.0 23.140124797821045 39 17 10 2 10 7.8058714077679605 12.810869507853495 0.08180046081542969 3 0.9788538400487092 8.471851291843661 2069.0 6.5685591171624695 4.0 - - - - - - - 259.0 4 5 ORC1 origin recognition complex, subunit 1 1205 152 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2059.[MT7]-QQTIILDDELIQWK[MT7].3y3_1.heavy 677.717 / 605.353 47834.0 39.543701171875 44 14 10 10 10 2.0215591539557027 49.46676915405822 0.0 3 0.9495818531899681 5.473021224772066 47834.0 88.1539169181795 0.0 - - - - - - - 763.875 95 8 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 1207 152 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2059.[MT7]-QQTIILDDELIQWK[MT7].3b4_1.heavy 677.717 / 615.358 55631.0 39.543701171875 44 14 10 10 10 2.0215591539557027 49.46676915405822 0.0 3 0.9495818531899681 5.473021224772066 55631.0 146.53497935342432 0.0 - - - - - - - 271.0 111 7 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 1209 152 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2059.[MT7]-QQTIILDDELIQWK[MT7].3b5_1.heavy 677.717 / 728.442 65114.0 39.543701171875 44 14 10 10 10 2.0215591539557027 49.46676915405822 0.0 3 0.9495818531899681 5.473021224772066 65114.0 108.90953736654802 0.0 - - - - - - - 281.0 130 6 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 1211 152 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2059.[MT7]-QQTIILDDELIQWK[MT7].3b3_1.heavy 677.717 / 502.274 22969.0 39.543701171875 44 14 10 10 10 2.0215591539557027 49.46676915405822 0.0 3 0.9495818531899681 5.473021224772066 22969.0 43.15376598441007 0.0 - - - - - - - 306.45454545454544 45 11 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 1213 153 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1554.[MT7]-EDTVR.2b4_1.heavy 382.207 / 589.295 7094.0 13.735099792480469 34 14 2 10 8 1.6777309813465284 52.85144452626 0.0 4 0.9433808318064736 5.161903757619002 7094.0 16.31325788048769 2.0 - - - - - - - 260.75 14 16 OBSL1;ANAPC2;LOC650621;SPATA16 obscurin-like 1;anaphase promoting complex subunit 2;anaphase-promoting complex subunit 2-like;spermatogenesis associated 16 1215 153 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1554.[MT7]-EDTVR.2y3_1.heavy 382.207 / 375.235 17943.0 13.735099792480469 34 14 2 10 8 1.6777309813465284 52.85144452626 0.0 4 0.9433808318064736 5.161903757619002 17943.0 18.22929118719783 0.0 - - - - - - - 730.3636363636364 35 11 OBSL1;ANAPC2;LOC650621;SPATA16 obscurin-like 1;anaphase promoting complex subunit 2;anaphase-promoting complex subunit 2-like;spermatogenesis associated 16 1217 153 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1554.[MT7]-EDTVR.2b2_1.heavy 382.207 / 389.179 4173.0 13.735099792480469 34 14 2 10 8 1.6777309813465284 52.85144452626 0.0 4 0.9433808318064736 5.161903757619002 4173.0 6.00431654676259 4.0 - - - - - - - 739.8181818181819 12 11 OBSL1;ANAPC2;LOC650621;SPATA16 obscurin-like 1;anaphase promoting complex subunit 2;anaphase-promoting complex subunit 2-like;spermatogenesis associated 16 1219 153 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1554.[MT7]-EDTVR.2y1_1.heavy 382.207 / 175.119 13040.0 13.735099792480469 34 14 2 10 8 1.6777309813465284 52.85144452626 0.0 4 0.9433808318064736 5.161903757619002 13040.0 8.578993745371196 3.0 - - - - - - - 869.6666666666666 72 3 OBSL1;ANAPC2;LOC650621;SPATA16 obscurin-like 1;anaphase promoting complex subunit 2;anaphase-promoting complex subunit 2-like;spermatogenesis associated 16 1221 154 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1555.[MT7]-NVIGAR.2y4_1.heavy 387.241 / 416.262 39060.0 18.66830062866211 50 20 10 10 10 14.39553561896553 6.946598073659314 0.0 2 0.9926593094544757 14.39553749013729 39060.0 47.3999070746949 0.0 - - - - - - - 667.4 78 10 YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1223 154 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1555.[MT7]-NVIGAR.2y5_1.heavy 387.241 / 515.33 43771.0 18.66830062866211 50 20 10 10 10 14.39553561896553 6.946598073659314 0.0 2 0.9926593094544757 14.39553749013729 43771.0 55.11628466327108 0.0 - - - - - - - 785.0 87 7 YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1225 154 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1555.[MT7]-NVIGAR.2b4_1.heavy 387.241 / 528.326 N/A 18.66830062866211 50 20 10 10 10 14.39553561896553 6.946598073659314 0.0 2 0.9926593094544757 14.39553749013729 36509.0 89.93579884350252 1.0 - - - - - - - 239.77777777777777 83 9 YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1227 154 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1555.[MT7]-NVIGAR.2y1_1.heavy 387.241 / 175.119 N/A 18.66830062866211 50 20 10 10 10 14.39553561896553 6.946598073659314 0.0 2 0.9926593094544757 14.39553749013729 33761.0 11.116345801096527 3.0 - - - - - - - 1767.0 79 1 YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1229 155 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1556.[MT7]-VIGAK[MT7].2y4_1.heavy 388.268 / 532.357 252188.0 18.460274696350098 24 3 10 5 6 0.45025749458668807 100.58085083292863 0.044300079345703125 5 0.5481385463565084 1.7617855558352313 252188.0 291.1662655768502 0.0 - - - - - - - 711.5 504 2 ABCA13;SMC3 ATP-binding cassette, sub-family A (ABC1), member 13;structural maintenance of chromosomes 3 1231 155 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1556.[MT7]-VIGAK[MT7].2y3_1.heavy 388.268 / 419.273 1422.0 18.460274696350098 24 3 10 5 6 0.45025749458668807 100.58085083292863 0.044300079345703125 5 0.5481385463565084 1.7617855558352313 1422.0 0.44839600933022744 33.0 - - - - - - - 290.0 64 7 ABCA13;SMC3 ATP-binding cassette, sub-family A (ABC1), member 13;structural maintenance of chromosomes 3 1233 155 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1556.[MT7]-VIGAK[MT7].2b1_1.heavy 388.268 / 244.178 83318.0 18.460274696350098 24 3 10 5 6 0.45025749458668807 100.58085083292863 0.044300079345703125 5 0.5481385463565084 1.7617855558352313 83318.0 76.0058793355083 0.0 - - - - - - - 1279.9 166 10 ABCA13;SMC3 ATP-binding cassette, sub-family A (ABC1), member 13;structural maintenance of chromosomes 3 1235 155 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1556.[MT7]-VIGAK[MT7].2y1_1.heavy 388.268 / 291.215 60964.0 18.460274696350098 24 3 10 5 6 0.45025749458668807 100.58085083292863 0.044300079345703125 5 0.5481385463565084 1.7617855558352313 60964.0 8.71580485906539 2.0 - - - - - - - 4064.0 173 1 ABCA13;SMC3 ATP-binding cassette, sub-family A (ABC1), member 13;structural maintenance of chromosomes 3 1237 156 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1557.[MT7]-VSSAK[MT7].2y4_1.heavy 390.247 / 536.316 29478.0 14.387999534606934 31 20 0 10 1 5.920039267834665 16.891779847361786 0.0 16 0.9927281438673737 14.463593314466863 29478.0 49.198331015299026 0.0 - - - - - - - 189.83333333333334 58 12 C9orf78;PLCG2;SPEF2 chromosome 9 open reading frame 78;phospholipase C, gamma 2 (phosphatidylinositol-specific);sperm flagellar 2 1239 156 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1557.[MT7]-VSSAK[MT7].2b4_1.heavy 390.247 / 489.279 1198.0 14.387999534606934 31 20 0 10 1 5.920039267834665 16.891779847361786 0.0 16 0.9927281438673737 14.463593314466863 1198.0 3.50041782689365 21.0 - - - - - - - 335.4 16 10 C9orf78;PLCG2;SPEF2 chromosome 9 open reading frame 78;phospholipase C, gamma 2 (phosphatidylinositol-specific);sperm flagellar 2 1241 156 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1557.[MT7]-VSSAK[MT7].2y3_1.heavy 390.247 / 449.284 5392.0 14.387999534606934 31 20 0 10 1 5.920039267834665 16.891779847361786 0.0 16 0.9927281438673737 14.463593314466863 5392.0 14.416044072215687 1.0 - - - - - - - 287.5 20 10 C9orf78;PLCG2;SPEF2 chromosome 9 open reading frame 78;phospholipase C, gamma 2 (phosphatidylinositol-specific);sperm flagellar 2 1243 156 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1557.[MT7]-VSSAK[MT7].2y1_1.heavy 390.247 / 291.215 N/A 14.387999534606934 31 20 0 10 1 5.920039267834665 16.891779847361786 0.0 16 0.9927281438673737 14.463593314466863 8508.0 0.9436699574107753 19.0 - - - - - - - 1797.0 335 1 C9orf78;PLCG2;SPEF2 chromosome 9 open reading frame 78;phospholipase C, gamma 2 (phosphatidylinositol-specific);sperm flagellar 2 1245 157 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1930.[MT7]-VPEPGVPTETIK[MT7].2y6_1.heavy 777.953 / 832.49 28789.0 26.96007537841797 42 17 10 5 10 4.546961893110437 21.992706855872303 0.0458984375 3 0.9722209932633429 7.387432025131167 28789.0 31.89829790068201 0.0 - - - - - - - 320.0 57 3 CDK6 cyclin-dependent kinase 6 1247 157 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1930.[MT7]-VPEPGVPTETIK[MT7].2y5_1.heavy 777.953 / 735.437 1279.0 26.96007537841797 42 17 10 5 10 4.546961893110437 21.992706855872303 0.0458984375 3 0.9722209932633429 7.387432025131167 1279.0 2.121008333333333 9.0 - - - - - - - 320.0 3 4 CDK6 cyclin-dependent kinase 6 1249 157 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1930.[MT7]-VPEPGVPTETIK[MT7].2y9_1.heavy 777.953 / 1085.63 25910.0 26.96007537841797 42 17 10 5 10 4.546961893110437 21.992706855872303 0.0458984375 3 0.9722209932633429 7.387432025131167 25910.0 87.45232645403377 0.0 - - - - - - - 320.0 51 3 CDK6 cyclin-dependent kinase 6 1251 157 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1930.[MT7]-VPEPGVPTETIK[MT7].2y3_1.heavy 777.953 / 505.347 6717.0 26.96007537841797 42 17 10 5 10 4.546961893110437 21.992706855872303 0.0458984375 3 0.9722209932633429 7.387432025131167 6717.0 14.907364628127443 0.0 - - - - - - - 320.0 13 5 CDK6 cyclin-dependent kinase 6 1253 158 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1931.[MT7]-GAVPLEMLEIALR.3y6_1.heavy 519.305 / 714.451 11546.0 47.81979942321777 43 17 10 6 10 9.843808687169492 10.158669594050613 0.035999298095703125 3 0.9772295464578891 8.162984598362074 11546.0 240.89643202979516 0.0 - - - - - - - 119.7 23 10 TTK TTK protein kinase 1255 158 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1931.[MT7]-GAVPLEMLEIALR.3b6_1.heavy 519.305 / 711.416 15375.0 47.81979942321777 43 17 10 6 10 9.843808687169492 10.158669594050613 0.035999298095703125 3 0.9772295464578891 8.162984598362074 15375.0 284.0861204013378 0.0 - - - - - - - 196.64285714285714 30 14 TTK TTK protein kinase 1257 158 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1931.[MT7]-GAVPLEMLEIALR.3b5_1.heavy 519.305 / 582.373 7538.0 47.81979942321777 43 17 10 6 10 9.843808687169492 10.158669594050613 0.035999298095703125 3 0.9772295464578891 8.162984598362074 7538.0 157.68036126629423 0.0 - - - - - - - 147.3846153846154 15 13 TTK TTK protein kinase 1259 158 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1931.[MT7]-GAVPLEMLEIALR.3y5_1.heavy 519.305 / 601.367 21477.0 47.81979942321777 43 17 10 6 10 9.843808687169492 10.158669594050613 0.035999298095703125 3 0.9772295464578891 8.162984598362074 21477.0 219.99829116945105 0.0 - - - - - - - 172.0625 42 16 TTK TTK protein kinase 1261 159 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 OPPA_ECOLI.LAIAASSLWK.2y7.peptide 530.31 / 762.41 1360110.0 34.791500091552734 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 1360110.0 71.94934298923818 1.0 - - - - - - - 272.0 2770 1 1263 159 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 OPPA_ECOLI.LAIAASSLWK.2y8.peptide 530.31 / 875.5 772423.0 34.791500091552734 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 772423.0 100.81774916309944 0.0 - - - - - - - 272.0 1544 2 1265 159 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 OPPA_ECOLI.LAIAASSLWK.2y6.peptide 530.31 / 691.38 1175740.0 34.791500091552734 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 1175740.0 75.53162965198828 0.0 - - - - - - - 272.0 2351 2 1267 160 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1938.[MT7]-VRIQETQAELPR.3b4_1.heavy 528.638 / 641.422 3590.0 24.359549522399902 39 14 10 5 10 2.056891601031205 39.70823698872197 0.04030036926269531 3 0.9348257397093888 4.807694668891089 3590.0 7.282801990676358 1.0 - - - - - - - 276.0 7 2 MCM6 minichromosome maintenance complex component 6 1269 160 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1938.[MT7]-VRIQETQAELPR.3b5_1.heavy 528.638 / 770.464 6904.0 24.359549522399902 39 14 10 5 10 2.056891601031205 39.70823698872197 0.04030036926269531 3 0.9348257397093888 4.807694668891089 6904.0 15.50608737629737 0.0 - - - - - - - 276.0 13 4 MCM6 minichromosome maintenance complex component 6 1271 160 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1938.[MT7]-VRIQETQAELPR.3y4_1.heavy 528.638 / 514.298 28997.0 24.359549522399902 39 14 10 5 10 2.056891601031205 39.70823698872197 0.04030036926269531 3 0.9348257397093888 4.807694668891089 28997.0 33.94738712337495 1.0 - - - - - - - 276.0 57 1 MCM6 minichromosome maintenance complex component 6 1273 160 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1938.[MT7]-VRIQETQAELPR.3y5_1.heavy 528.638 / 585.336 25683.0 24.359549522399902 39 14 10 5 10 2.056891601031205 39.70823698872197 0.04030036926269531 3 0.9348257397093888 4.807694668891089 25683.0 40.29659594824394 0.0 - - - - - - - 276.0 51 3 MCM6 minichromosome maintenance complex component 6 1275 161 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1939.[MT7]-ELTLQDVELLK[MT7].2y5_1.heavy 794.974 / 745.494 12915.0 37.942100524902344 48 18 10 10 10 5.617695354040774 17.80089408516441 0.0 3 0.9856042885693576 10.27361826947924 12915.0 23.571718202720415 0.0 - - - - - - - 384.3333333333333 25 9 TRIM32 tripartite motif-containing 32 1277 161 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1939.[MT7]-ELTLQDVELLK[MT7].2y3_1.heavy 794.974 / 517.383 10608.0 37.942100524902344 48 18 10 10 10 5.617695354040774 17.80089408516441 0.0 3 0.9856042885693576 10.27361826947924 10608.0 21.46792220982283 0.0 - - - - - - - 358.77777777777777 21 9 TRIM32 tripartite motif-containing 32 1279 161 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1939.[MT7]-ELTLQDVELLK[MT7].2b6_1.heavy 794.974 / 844.453 14990.0 37.942100524902344 48 18 10 10 10 5.617695354040774 17.80089408516441 0.0 3 0.9856042885693576 10.27361826947924 14990.0 38.36449851416248 0.0 - - - - - - - 335.54545454545456 29 11 TRIM32 tripartite motif-containing 32 1281 161 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1939.[MT7]-ELTLQDVELLK[MT7].2y6_1.heavy 794.974 / 860.521 12223.0 37.942100524902344 48 18 10 10 10 5.617695354040774 17.80089408516441 0.0 3 0.9856042885693576 10.27361826947924 12223.0 16.08962415783184 1.0 - - - - - - - 254.0 30 10 TRIM32 tripartite motif-containing 32 1283 162 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1936.[MT7]-LVTQDTENELK[MT7].2y4_1.heavy 789.435 / 647.385 5419.0 25.795299530029297 43 13 10 10 10 2.0133030261694778 36.25242934078368 0.0 3 0.903549804019678 3.941456571009363 5419.0 14.258669498553822 1.0 - - - - - - - 301.0 15 3 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 1285 162 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1936.[MT7]-LVTQDTENELK[MT7].2y9_1.heavy 789.435 / 1221.61 13548.0 25.795299530029297 43 13 10 10 10 2.0133030261694778 36.25242934078368 0.0 3 0.903549804019678 3.941456571009363 13548.0 76.51694352159468 0.0 - - - - - - - 301.0 27 5 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 1287 162 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1936.[MT7]-LVTQDTENELK[MT7].2y6_1.heavy 789.435 / 877.475 20774.0 25.795299530029297 43 13 10 10 10 2.0133030261694778 36.25242934078368 0.0 3 0.903549804019678 3.941456571009363 20774.0 135.96272425249168 0.0 - - - - - - - 301.0 41 7 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 1289 162 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1936.[MT7]-LVTQDTENELK[MT7].2y7_1.heavy 789.435 / 992.502 15957.0 25.795299530029297 43 13 10 10 10 2.0133030261694778 36.25242934078368 0.0 3 0.903549804019678 3.941456571009363 15957.0 73.15833887043189 0.0 - - - - - - - 301.0 31 5 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 1291 163 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1937.[MT7]-AIAC[CAM]LLFGGSRK[MT7].3y7_1.heavy 527.644 / 908.543 7518.0 36.06125068664551 41 16 10 5 10 2.413131229922031 33.79390968566618 0.041500091552734375 3 0.9602805889010415 6.171814894107653 7518.0 34.824970471757105 0.0 - - - - - - - 259.0 15 1 MCM5 minichromosome maintenance complex component 5 1293 163 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1937.[MT7]-AIAC[CAM]LLFGGSRK[MT7].3y6_1.heavy 527.644 / 795.459 11666.0 36.06125068664551 41 16 10 5 10 2.413131229922031 33.79390968566618 0.041500091552734375 3 0.9602805889010415 6.171814894107653 11666.0 86.43650193050193 0.0 - - - - - - - 259.0 23 5 MCM5 minichromosome maintenance complex component 5 1295 163 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1937.[MT7]-AIAC[CAM]LLFGGSRK[MT7].3b4_1.heavy 527.644 / 560.298 12185.0 36.06125068664551 41 16 10 5 10 2.413131229922031 33.79390968566618 0.041500091552734375 3 0.9602805889010415 6.171814894107653 12185.0 51.75096525096525 0.0 - - - - - - - 259.0 24 4 MCM5 minichromosome maintenance complex component 5 1297 163 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1937.[MT7]-AIAC[CAM]LLFGGSRK[MT7].3y5_1.heavy 527.644 / 648.391 11666.0 36.06125068664551 41 16 10 5 10 2.413131229922031 33.79390968566618 0.041500091552734375 3 0.9602805889010415 6.171814894107653 11666.0 80.7161081081081 0.0 - - - - - - - 259.0 23 4 MCM5 minichromosome maintenance complex component 5 1299 164 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1934.[MT7]-APASEEEFQFLR.2y5_1.heavy 784.397 / 710.398 5991.0 34.93304920196533 39 14 10 5 10 1.5292568431459501 43.75429273010249 0.043399810791015625 3 0.9458704760763954 5.280396289840292 5991.0 14.489811663904941 0.0 - - - - - - - 583.8571428571429 11 7 PML promyelocytic leukemia 1301 164 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1934.[MT7]-APASEEEFQFLR.2y9_1.heavy 784.397 / 1184.56 5446.0 34.93304920196533 39 14 10 5 10 1.5292568431459501 43.75429273010249 0.043399810791015625 3 0.9458704760763954 5.280396289840292 5446.0 17.986788990825687 0.0 - - - - - - - 272.0 10 2 PML promyelocytic leukemia 1303 164 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1934.[MT7]-APASEEEFQFLR.2y6_1.heavy 784.397 / 839.441 2995.0 34.93304920196533 39 14 10 5 10 1.5292568431459501 43.75429273010249 0.043399810791015625 3 0.9458704760763954 5.280396289840292 2995.0 5.120657777909583 0.0 - - - - - - - 272.0 5 4 PML promyelocytic leukemia 1305 164 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1934.[MT7]-APASEEEFQFLR.2y7_1.heavy 784.397 / 968.484 2995.0 34.93304920196533 39 14 10 5 10 1.5292568431459501 43.75429273010249 0.043399810791015625 3 0.9458704760763954 5.280396289840292 2995.0 10.401379195746095 1.0 - - - - - - - 272.0 7 11 PML promyelocytic leukemia 1307 165 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1932.[MT7]-RAYPDANLLNDR.3b5_1.heavy 521.278 / 747.391 18127.0 26.157800674438477 44 14 10 10 10 3.503536566979693 28.542587779013076 0.0 3 0.9371833980454606 4.898071235799219 18127.0 62.58297582076934 0.0 - - - - - - - 302.0 36 6 CCND1 cyclin D1 1309 165 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1932.[MT7]-RAYPDANLLNDR.3b3_1.heavy 521.278 / 535.311 12085.0 26.157800674438477 44 14 10 10 10 3.503536566979693 28.542587779013076 0.0 3 0.9371833980454606 4.898071235799219 12085.0 7.050058144973719 2.0 - - - - - - - 302.0 32 2 CCND1 cyclin D1 1311 165 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1932.[MT7]-RAYPDANLLNDR.3y4_1.heavy 521.278 / 517.273 42296.0 26.157800674438477 44 14 10 10 10 3.503536566979693 28.542587779013076 0.0 3 0.9371833980454606 4.898071235799219 42296.0 32.32291631148774 0.0 - - - - - - - 302.0 84 3 CCND1 cyclin D1 1313 165 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1932.[MT7]-RAYPDANLLNDR.3b7_1.heavy 521.278 / 932.471 7855.0 26.157800674438477 44 14 10 10 10 3.503536566979693 28.542587779013076 0.0 3 0.9371833980454606 4.898071235799219 7855.0 19.897599337748343 0.0 - - - - - - - 302.0 15 2 CCND1 cyclin D1 1315 166 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1933.[MT7]-VDGVAAALDSFQAR.2y10_1.heavy 782.416 / 1049.54 11129.0 36.683899879455566 34 12 10 2 10 0.920280249078237 62.28618852522085 0.08040237426757812 3 0.8855606479169883 3.6127942876948915 11129.0 66.64019531345846 0.0 - - - - - - - 282.42857142857144 22 7 UBA7 ubiquitin-like modifier activating enzyme 7 1317 166 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1933.[MT7]-VDGVAAALDSFQAR.2y12_1.heavy 782.416 / 1205.63 3957.0 36.683899879455566 34 12 10 2 10 0.920280249078237 62.28618852522085 0.08040237426757812 3 0.8855606479169883 3.6127942876948915 3957.0 23.694424733161576 0.0 - - - - - - - 433.0 7 4 UBA7 ubiquitin-like modifier activating enzyme 7 1319 166 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1933.[MT7]-VDGVAAALDSFQAR.2y5_1.heavy 782.416 / 608.315 6925.0 36.683899879455566 34 12 10 2 10 0.920280249078237 62.28618852522085 0.08040237426757812 3 0.8855606479169883 3.6127942876948915 6925.0 50.2412955465587 0.0 - - - - - - - 247.0 13 7 UBA7 ubiquitin-like modifier activating enzyme 7 1321 166 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1933.[MT7]-VDGVAAALDSFQAR.2b4_1.heavy 782.416 / 515.295 14591.0 36.683899879455566 34 12 10 2 10 0.920280249078237 62.28618852522085 0.08040237426757812 3 0.8855606479169883 3.6127942876948915 14591.0 2.121922731356694 1.0 - - - - - - - 274.55555555555554 29 9 UBA7 ubiquitin-like modifier activating enzyme 7 1323 167 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1649.[MT7]-LIDILLR.2y4_1.heavy 500.338 / 514.371 5176.0 42.80280017852783 42 16 10 6 10 3.2142576807195202 24.759521167006106 0.039600372314453125 3 0.966710772967106 6.74525412080532 5176.0 35.64311377245509 0.0 - - - - - - - 300.6 10 5 BIRC6 baculoviral IAP repeat-containing 6 1325 167 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1649.[MT7]-LIDILLR.2y5_1.heavy 500.338 / 629.398 3674.0 42.80280017852783 42 16 10 6 10 3.2142576807195202 24.759521167006106 0.039600372314453125 3 0.966710772967106 6.74525412080532 3674.0 37.224 0.0 - - - - - - - 167.0 7 4 BIRC6 baculoviral IAP repeat-containing 6 1327 167 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1649.[MT7]-LIDILLR.2b4_1.heavy 500.338 / 599.388 3006.0 42.80280017852783 42 16 10 6 10 3.2142576807195202 24.759521167006106 0.039600372314453125 3 0.966710772967106 6.74525412080532 3006.0 11.4 0.0 - - - - - - - 250.5 6 2 BIRC6 baculoviral IAP repeat-containing 6 1329 167 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1649.[MT7]-LIDILLR.2y6_1.heavy 500.338 / 742.482 5677.0 42.80280017852783 42 16 10 6 10 3.2142576807195202 24.759521167006106 0.039600372314453125 3 0.966710772967106 6.74525412080532 5677.0 42.49251497005987 0.0 - - - - - - - 208.75 11 4 BIRC6 baculoviral IAP repeat-containing 6 1331 168 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1648.[MT7]-ENVQPLR.2y5_1.heavy 500.289 / 612.383 7827.0 20.286100387573242 43 13 10 10 10 1.1248832052474227 58.0698243346798 0.0 3 0.9261650015913422 4.513590254259149 7827.0 8.415517188417464 1.0 - - - - - - - 396.625 18 8 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 1333 168 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1648.[MT7]-ENVQPLR.2b4_1.heavy 500.289 / 615.322 21578.0 20.286100387573242 43 13 10 10 10 1.1248832052474227 58.0698243346798 0.0 3 0.9261650015913422 4.513590254259149 21578.0 65.41362204724409 0.0 - - - - - - - 282.3333333333333 43 9 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 1335 168 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1648.[MT7]-ENVQPLR.2y6_1.heavy 500.289 / 726.426 29405.0 20.286100387573242 43 13 10 10 10 1.1248832052474227 58.0698243346798 0.0 3 0.9261650015913422 4.513590254259149 29405.0 93.84574468085106 0.0 - - - - - - - 293.15384615384613 58 13 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 1337 168 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1648.[MT7]-ENVQPLR.2b2_1.heavy 500.289 / 388.195 8462.0 20.286100387573242 43 13 10 10 10 1.1248832052474227 58.0698243346798 0.0 3 0.9261650015913422 4.513590254259149 8462.0 22.004150277132133 0.0 - - - - - - - 317.5 16 6 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 1339 169 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1647.[MT7]-NFQWVR.2y4_1.heavy 497.273 / 588.325 4333.0 30.222200393676758 40 10 10 10 10 0.733538780020809 68.20596761702245 0.0 3 0.8279139798748687 2.9312658457017773 4333.0 3.887333263338333 1.0 - - - - - - - 333.0 9 4 PIK3CG phosphoinositide-3-kinase, catalytic, gamma polypeptide 1341 169 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1647.[MT7]-NFQWVR.2b3_1.heavy 497.273 / 534.279 8667.0 30.222200393676758 40 10 10 10 10 0.733538780020809 68.20596761702245 0.0 3 0.8279139798748687 2.9312658457017773 8667.0 30.532305405405406 0.0 - - - - - - - 333.0 17 2 PIK3CG phosphoinositide-3-kinase, catalytic, gamma polypeptide 1343 169 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1647.[MT7]-NFQWVR.2y5_1.heavy 497.273 / 735.394 22667.0 30.222200393676758 40 10 10 10 10 0.733538780020809 68.20596761702245 0.0 3 0.8279139798748687 2.9312658457017773 22667.0 83.71269945864844 0.0 - - - - - - - 333.0 45 2 PIK3CG phosphoinositide-3-kinase, catalytic, gamma polypeptide 1345 169 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1647.[MT7]-NFQWVR.2b4_1.heavy 497.273 / 720.359 10000.0 30.222200393676758 40 10 10 10 10 0.733538780020809 68.20596761702245 0.0 3 0.8279139798748687 2.9312658457017773 10000.0 32.257375249231224 1.0 - - - - - - - 333.0 20 2 PIK3CG phosphoinositide-3-kinase, catalytic, gamma polypeptide 1347 170 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1646.[MT7]-EISLLK[MT7].2y4_1.heavy 495.826 / 604.415 46667.0 29.97559928894043 46 18 10 10 8 5.8328044358717275 17.14441159470397 0.0 4 0.9863376120869973 10.546378707695135 46667.0 97.27673797759785 0.0 - - - - - - - 333.0 93 6 CDK2;CDK3;CDK1 cyclin-dependent kinase 2;cyclin-dependent kinase 3;cyclin-dependent kinase 1 1349 170 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1646.[MT7]-EISLLK[MT7].2y5_1.heavy 495.826 / 717.499 50333.0 29.97559928894043 46 18 10 10 8 5.8328044358717275 17.14441159470397 0.0 4 0.9863376120869973 10.546378707695135 50333.0 143.4421214924399 0.0 - - - - - - - 333.0 100 4 CDK2;CDK3;CDK1 cyclin-dependent kinase 2;cyclin-dependent kinase 3;cyclin-dependent kinase 1 1351 170 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1646.[MT7]-EISLLK[MT7].2b4_1.heavy 495.826 / 587.352 9667.0 29.97559928894043 46 18 10 10 8 5.8328044358717275 17.14441159470397 0.0 4 0.9863376120869973 10.546378707695135 9667.0 17.9693680836747 1.0 - - - - - - - 333.0 62 5 CDK2;CDK3;CDK1 cyclin-dependent kinase 2;cyclin-dependent kinase 3;cyclin-dependent kinase 1 1353 170 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1646.[MT7]-EISLLK[MT7].2y3_1.heavy 495.826 / 517.383 16667.0 29.97559928894043 46 18 10 10 8 5.8328044358717275 17.14441159470397 0.0 4 0.9863376120869973 10.546378707695135 16667.0 21.065208338332333 1.0 - - - - - - - 333.0 47 3 CDK2;CDK3;CDK1 cyclin-dependent kinase 2;cyclin-dependent kinase 3;cyclin-dependent kinase 1 1355 171 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1832.[MT7]-IPGIIIAASAVR.2y8_1.heavy 662.925 / 800.499 29178.0 38.82040023803711 50 20 10 10 10 10.461073273961228 9.559248595353127 0.0 3 0.9971398149868677 23.070751351791237 29178.0 91.7212756264237 0.0 - - - - - - - 384.0 58 8 MCM5 minichromosome maintenance complex component 5 1357 171 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1832.[MT7]-IPGIIIAASAVR.2y6_1.heavy 662.925 / 574.331 21500.0 38.82040023803711 50 20 10 10 10 10.461073273961228 9.559248595353127 0.0 3 0.9971398149868677 23.070751351791237 21500.0 53.242759518385945 1.0 - - - - - - - 344.7142857142857 43 7 MCM5 minichromosome maintenance complex component 5 1359 171 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1832.[MT7]-IPGIIIAASAVR.2y11_1.heavy 662.925 / 1067.66 231452.0 38.82040023803711 50 20 10 10 10 10.461073273961228 9.559248595353127 0.0 3 0.9971398149868677 23.070751351791237 231452.0 313.49786474164137 0.0 - - - - - - - 292.3333333333333 462 3 MCM5 minichromosome maintenance complex component 5 1361 171 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1832.[MT7]-IPGIIIAASAVR.2y7_1.heavy 662.925 / 687.415 25010.0 38.82040023803711 50 20 10 10 10 10.461073273961228 9.559248595353127 0.0 3 0.9971398149868677 23.070751351791237 25010.0 42.4052871467639 0.0 - - - - - - - 299.0 50 11 MCM5 minichromosome maintenance complex component 5 1363 172 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1736.[MT7]-IDNETQK[MT7].2y5_1.heavy 568.313 / 763.407 11122.0 16.802200317382812 37 17 2 10 8 3.0212725669601337 33.09863568536467 0.0 4 0.9779398908604864 8.293864019846358 11122.0 71.81206145489402 0.0 - - - - - - - 218.33333333333334 22 6 PML promyelocytic leukemia 1365 172 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1736.[MT7]-IDNETQK[MT7].2b4_1.heavy 568.313 / 616.306 9650.0 16.802200317382812 37 17 2 10 8 3.0212725669601337 33.09863568536467 0.0 4 0.9779398908604864 8.293864019846358 9650.0 32.443742720653724 0.0 - - - - - - - 327.25 19 4 PML promyelocytic leukemia 1367 172 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1736.[MT7]-IDNETQK[MT7].2y3_1.heavy 568.313 / 520.321 10467.0 16.802200317382812 37 17 2 10 8 3.0212725669601337 33.09863568536467 0.0 4 0.9779398908604864 8.293864019846358 10467.0 33.98560402651144 0.0 - - - - - - - 164.0 20 7 PML promyelocytic leukemia 1369 172 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1736.[MT7]-IDNETQK[MT7].2y6_1.heavy 568.313 / 878.434 13575.0 16.802200317382812 37 17 2 10 8 3.0212725669601337 33.09863568536467 0.0 4 0.9779398908604864 8.293864019846358 13575.0 39.729938704378824 1.0 - - - - - - - 272.6666666666667 54 3 PML promyelocytic leukemia 1371 173 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2382.[MT7]-ELNHPNIVK[MT7].3y3_1.heavy 451.269 / 503.367 66317.0 21.896099090576172 47 17 10 10 10 3.278813335086324 30.4988389945557 0.0 3 0.9710162982112178 7.231541278298925 66317.0 128.77367015877476 0.0 - - - - - - - 477.0 132 3 CDK2 cyclin-dependent kinase 2 1373 173 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2382.[MT7]-ELNHPNIVK[MT7].3b4_1.heavy 451.269 / 638.338 70134.0 21.896099090576172 47 17 10 10 10 3.278813335086324 30.4988389945557 0.0 3 0.9710162982112178 7.231541278298925 70134.0 162.89687888689787 0.0 - - - - - - - 278.6666666666667 140 6 CDK2 cyclin-dependent kinase 2 1375 173 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2382.[MT7]-ELNHPNIVK[MT7].3y4_1.heavy 451.269 / 617.41 59876.0 21.896099090576172 47 17 10 10 10 3.278813335086324 30.4988389945557 0.0 3 0.9710162982112178 7.231541278298925 59876.0 116.11174004192873 0.0 - - - - - - - 818.0 119 7 CDK2 cyclin-dependent kinase 2 1377 173 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2382.[MT7]-ELNHPNIVK[MT7].3b3_1.heavy 451.269 / 501.279 100669.0 21.896099090576172 47 17 10 10 10 3.278813335086324 30.4988389945557 0.0 3 0.9710162982112178 7.231541278298925 100669.0 139.9625061180238 0.0 - - - - - - - 334.2 201 5 CDK2 cyclin-dependent kinase 2 1379 174 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1830.[MT7]-DLLFILTAK[MT7].2y5_1.heavy 661.42 / 689.468 62428.0 44.34600067138672 46 16 10 10 10 2.5992293504138044 30.614816429126375 0.0 3 0.963447125524813 6.435314172155755 62428.0 208.6435251608693 0.0 - - - - - - - 244.2 124 5 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 1381 174 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1830.[MT7]-DLLFILTAK[MT7].2b4_1.heavy 661.42 / 633.373 76678.0 44.34600067138672 46 16 10 10 10 2.5992293504138044 30.614816429126375 0.0 3 0.963447125524813 6.435314172155755 76678.0 206.59284346224678 0.0 - - - - - - - 627.75 153 8 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 1383 174 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1830.[MT7]-DLLFILTAK[MT7].2y6_1.heavy 661.42 / 836.536 83328.0 44.34600067138672 46 16 10 10 10 2.5992293504138044 30.614816429126375 0.0 3 0.963447125524813 6.435314172155755 83328.0 288.5010015814444 0.0 - - - - - - - 271.2857142857143 166 7 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 1385 174 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1830.[MT7]-DLLFILTAK[MT7].2b5_1.heavy 661.42 / 746.457 45193.0 44.34600067138672 46 16 10 10 10 2.5992293504138044 30.614816429126375 0.0 3 0.963447125524813 6.435314172155755 45193.0 111.2012102998701 0.0 - - - - - - - 256.22222222222223 90 9 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 1387 175 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1735.[MT7]-RVQDELAR.2b4_1.heavy 565.824 / 643.364 16584.0 19.41022539138794 46 20 10 6 10 8.855600772018395 11.292288640198908 0.03769874572753906 3 0.9956495894458042 18.704223163605675 16584.0 65.63727926664166 0.0 - - - - - - - 343.4 33 10 TRIM32 tripartite motif-containing 32 1389 175 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1735.[MT7]-RVQDELAR.2b6_1.heavy 565.824 / 885.491 5258.0 19.41022539138794 46 20 10 6 10 8.855600772018395 11.292288640198908 0.03769874572753906 3 0.9956495894458042 18.704223163605675 5258.0 18.167403314466537 0.0 - - - - - - - 259.7142857142857 10 7 TRIM32 tripartite motif-containing 32 1391 175 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1735.[MT7]-RVQDELAR.2b5_1.heavy 565.824 / 772.407 8494.0 19.41022539138794 46 20 10 6 10 8.855600772018395 11.292288640198908 0.03769874572753906 3 0.9956495894458042 18.704223163605675 8494.0 11.549320148331272 0.0 - - - - - - - 262.6 16 10 TRIM32 tripartite motif-containing 32 1393 175 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1735.[MT7]-RVQDELAR.2y7_1.heavy 565.824 / 830.437 10517.0 19.41022539138794 46 20 10 6 10 8.855600772018395 11.292288640198908 0.03769874572753906 3 0.9956495894458042 18.704223163605675 10517.0 42.43245049504951 0.0 - - - - - - - 291.77777777777777 21 9 TRIM32 tripartite motif-containing 32 1395 176 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2383.[MT7]-LETGQFLTFR.2y8_1.heavy 678.376 / 969.515 21270.0 36.73400115966797 46 20 8 10 8 7.5580843074632105 13.230865908872605 0.0 4 0.9912668767883218 13.196568198682776 21270.0 42.70973712943467 0.0 - - - - - - - 352.8888888888889 42 9 UBA6 ubiquitin-like modifier activating enzyme 6 1397 176 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2383.[MT7]-LETGQFLTFR.2y9_1.heavy 678.376 / 1098.56 30071.0 36.73400115966797 46 20 8 10 8 7.5580843074632105 13.230865908872605 0.0 4 0.9912668767883218 13.196568198682776 30071.0 37.51188139059305 1.0 - - - - - - - 279.0 79 7 UBA6 ubiquitin-like modifier activating enzyme 6 1399 176 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2383.[MT7]-LETGQFLTFR.2b5_1.heavy 678.376 / 673.364 9779.0 36.73400115966797 46 20 8 10 8 7.5580843074632105 13.230865908872605 0.0 4 0.9912668767883218 13.196568198682776 9779.0 15.465085207907293 0.0 - - - - - - - 434.55555555555554 19 9 UBA6 ubiquitin-like modifier activating enzyme 6 1401 176 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2383.[MT7]-LETGQFLTFR.2y7_1.heavy 678.376 / 868.468 16869.0 36.73400115966797 46 20 8 10 8 7.5580843074632105 13.230865908872605 0.0 4 0.9912668767883218 13.196568198682776 16869.0 76.30449169595666 0.0 - - - - - - - 349.0 33 7 UBA6 ubiquitin-like modifier activating enzyme 6 1403 177 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1734.[MT7]-VIAGIGLAK[MT7].2y4_1.heavy 565.381 / 532.357 47562.0 30.853300094604492 47 17 10 10 10 3.374593219086125 20.50507986151779 0.0 3 0.9717201340646028 7.321412324911593 47562.0 116.91521753280998 0.0 - - - - - - - 789.875 95 8 NEDD4 neural precursor cell expressed, developmentally down-regulated 4 1405 177 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1734.[MT7]-VIAGIGLAK[MT7].2y8_1.heavy 565.381 / 886.584 56542.0 30.853300094604492 47 17 10 10 10 3.374593219086125 20.50507986151779 0.0 3 0.9717201340646028 7.321412324911593 56542.0 80.7487269275393 0.0 - - - - - - - 333.0 113 2 NEDD4 neural precursor cell expressed, developmentally down-regulated 4 1407 177 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1734.[MT7]-VIAGIGLAK[MT7].2y6_1.heavy 565.381 / 702.463 54214.0 30.853300094604492 47 17 10 10 10 3.374593219086125 20.50507986151779 0.0 3 0.9717201340646028 7.321412324911593 54214.0 87.74945198668013 0.0 - - - - - - - 333.0 108 2 NEDD4 neural precursor cell expressed, developmentally down-regulated 4 1409 177 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1734.[MT7]-VIAGIGLAK[MT7].2y7_1.heavy 565.381 / 773.5 50222.0 30.853300094604492 47 17 10 10 10 3.374593219086125 20.50507986151779 0.0 3 0.9717201340646028 7.321412324911593 50222.0 187.05818856933084 0.0 - - - - - - - 333.0 100 3 NEDD4 neural precursor cell expressed, developmentally down-regulated 4 1411 178 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1836.[MT7]-ARAETEELIR.2b8_1.heavy 666.374 / 1044.54 2256.0 22.81839942932129 46 18 8 10 10 3.2561792915154464 25.868164692443603 0.0 3 0.980523369896879 8.828726196328907 2256.0 17.607585657370514 1.0 - - - - - - - 251.0 19 2 PML promyelocytic leukemia 1413 178 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1836.[MT7]-ARAETEELIR.2y4_1.heavy 666.374 / 530.33 3007.0 22.81839942932129 46 18 8 10 10 3.2561792915154464 25.868164692443603 0.0 3 0.980523369896879 8.828726196328907 3007.0 8.17983918037827 1.0 - - - - - - - 251.0 6 8 PML promyelocytic leukemia 1415 178 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1836.[MT7]-ARAETEELIR.2y8_1.heavy 666.374 / 960.5 2757.0 22.81839942932129 46 18 8 10 10 3.2561792915154464 25.868164692443603 0.0 3 0.980523369896879 8.828726196328907 2757.0 15.608332657394374 0.0 - - - - - - - 251.0 5 6 PML promyelocytic leukemia 1417 178 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1836.[MT7]-ARAETEELIR.2b7_1.heavy 666.374 / 931.46 6767.0 22.81839942932129 46 18 8 10 10 3.2561792915154464 25.868164692443603 0.0 3 0.980523369896879 8.828726196328907 6767.0 53.7046374501992 0.0 - - - - - - - 251.0 13 4 PML promyelocytic leukemia 1419 179 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1641.[MT7]-VQWFVR.2b3_1.heavy 489.786 / 558.316 16624.0 34.160499572753906 50 20 10 10 10 11.02589474673451 9.06955873396275 0.0 3 0.9960826460405924 19.711700265162168 16624.0 109.87780821917809 0.0 - - - - - - - 292.0 33 4 ORC1 origin recognition complex, subunit 1 1421 179 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1641.[MT7]-VQWFVR.2y4_1.heavy 489.786 / 607.335 19541.0 34.160499572753906 50 20 10 10 10 11.02589474673451 9.06955873396275 0.0 3 0.9960826460405924 19.711700265162168 19541.0 98.76334265372776 0.0 - - - - - - - 583.0 39 2 ORC1 origin recognition complex, subunit 1 1423 179 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1641.[MT7]-VQWFVR.2y5_1.heavy 489.786 / 735.394 59498.0 34.160499572753906 50 20 10 10 10 11.02589474673451 9.06955873396275 0.0 3 0.9960826460405924 19.711700265162168 59498.0 222.81593479452053 0.0 - - - - - - - 292.0 118 6 ORC1 origin recognition complex, subunit 1 1425 179 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1641.[MT7]-VQWFVR.2b4_1.heavy 489.786 / 705.384 14583.0 34.160499572753906 50 20 10 10 10 11.02589474673451 9.06955873396275 0.0 3 0.9960826460405924 19.711700265162168 14583.0 40.02195540308748 0.0 - - - - - - - 292.0 29 4 ORC1 origin recognition complex, subunit 1 1427 180 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1733.[MT7]-K[MT7]LQPTVR.3y6_1.heavy 377.248 / 713.43 11216.0 18.21500015258789 50 20 10 10 10 10.578482983524458 9.453151284144031 0.0 3 0.9968135961190681 21.857302928169286 11216.0 70.47486631016042 0.0 - - - - - - - 224.4 22 5 MAPK8;MAPK9;MAPK10 mitogen-activated protein kinase 8;mitogen-activated protein kinase 9;mitogen-activated protein kinase 10 1429 180 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1733.[MT7]-K[MT7]LQPTVR.3b3_1.heavy 377.248 / 658.449 6542.0 18.21500015258789 50 20 10 10 10 10.578482983524458 9.453151284144031 0.0 3 0.9968135961190681 21.857302928169286 6542.0 43.729946524064175 0.0 - - - - - - - 261.8 13 5 MAPK8;MAPK9;MAPK10 mitogen-activated protein kinase 8;mitogen-activated protein kinase 9;mitogen-activated protein kinase 10 1431 180 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1733.[MT7]-K[MT7]LQPTVR.3y4_1.heavy 377.248 / 472.288 127111.0 18.21500015258789 50 20 10 10 10 10.578482983524458 9.453151284144031 0.0 3 0.9968135961190681 21.857302928169286 127111.0 197.83757190067038 0.0 - - - - - - - 299.2 254 5 MAPK8;MAPK9;MAPK10 mitogen-activated protein kinase 8;mitogen-activated protein kinase 9;mitogen-activated protein kinase 10 1433 180 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1733.[MT7]-K[MT7]LQPTVR.3y5_1.heavy 377.248 / 600.346 9720.0 18.21500015258789 50 20 10 10 10 10.578482983524458 9.453151284144031 0.0 3 0.9968135961190681 21.857302928169286 9720.0 43.66203208556149 0.0 - - - - - - - 267.14285714285717 19 7 MAPK8;MAPK9;MAPK10 mitogen-activated protein kinase 8;mitogen-activated protein kinase 9;mitogen-activated protein kinase 10 1435 181 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1835.[MT7]-LINLTDILK[MT7].2y5_1.heavy 665.931 / 733.458 19585.0 42.0900993347168 48 18 10 10 10 2.8153780777656636 24.067397849077555 0.0 3 0.9822131816129204 9.239902711680516 19585.0 52.26334269662921 0.0 - - - - - - - 275.09090909090907 39 11 PIK3CA phosphoinositide-3-kinase, catalytic, alpha polypeptide 1437 181 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1835.[MT7]-LINLTDILK[MT7].2b6_1.heavy 665.931 / 814.479 10683.0 42.0900993347168 48 18 10 10 10 2.8153780777656636 24.067397849077555 0.0 3 0.9822131816129204 9.239902711680516 10683.0 33.00926966292135 0.0 - - - - - - - 252.16666666666666 21 12 PIK3CA phosphoinositide-3-kinase, catalytic, alpha polypeptide 1439 181 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1835.[MT7]-LINLTDILK[MT7].2y3_1.heavy 665.931 / 517.383 16736.0 42.0900993347168 48 18 10 10 10 2.8153780777656636 24.067397849077555 0.0 3 0.9822131816129204 9.239902711680516 16736.0 37.504519350811485 0.0 - - - - - - - 645.25 33 8 PIK3CA phosphoinositide-3-kinase, catalytic, alpha polypeptide 1441 181 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1835.[MT7]-LINLTDILK[MT7].2y7_1.heavy 665.931 / 960.585 19407.0 42.0900993347168 48 18 10 10 10 2.8153780777656636 24.067397849077555 0.0 3 0.9822131816129204 9.239902711680516 19407.0 134.37712078651685 0.0 - - - - - - - 200.25 38 8 PIK3CA phosphoinositide-3-kinase, catalytic, alpha polypeptide 1443 182 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1640.[MT7]-LLTTIK[MT7].2y4_1.heavy 488.836 / 606.394 42667.0 29.578800201416016 50 20 10 10 10 9.977353372384883 10.022698031000683 0.0 3 0.9933024061731299 15.071631752169521 42667.0 94.63246920688194 0.0 - - - - - - - 333.0 85 3 CUL2 cullin 2 1445 182 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1640.[MT7]-LLTTIK[MT7].2y5_1.heavy 488.836 / 719.478 50667.0 29.578800201416016 50 20 10 10 10 9.977353372384883 10.022698031000683 0.0 3 0.9933024061731299 15.071631752169521 50667.0 87.15636234058515 0.0 - - - - - - - 1166.5 101 8 CUL2 cullin 2 1447 182 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1640.[MT7]-LLTTIK[MT7].2b4_1.heavy 488.836 / 573.373 4333.0 29.578800201416016 50 20 10 10 10 9.977353372384883 10.022698031000683 0.0 3 0.9933024061731299 15.071631752169521 4333.0 8.96716682169043 3.0 - - - - - - - 333.0 36 3 CUL2 cullin 2 1449 182 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1640.[MT7]-LLTTIK[MT7].2y3_1.heavy 488.836 / 505.347 30333.0 29.578800201416016 50 20 10 10 10 9.977353372384883 10.022698031000683 0.0 3 0.9933024061731299 15.071631752169521 30333.0 28.921858237193074 1.0 - - - - - - - 333.0 61 1 CUL2 cullin 2 1451 183 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1732.[MT7]-FLLQHLGR.2b3_1.heavy 564.344 / 518.346 5991.0 31.075600624084473 43 18 10 5 10 5.522704286458247 18.107071248627502 0.04920005798339844 3 0.9830516302991213 9.46636200795229 5991.0 12.837779884092509 0.0 - - - - - - - 760.8571428571429 11 7 PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) 1453 183 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1732.[MT7]-FLLQHLGR.2y5_1.heavy 564.344 / 610.342 7322.0 31.075600624084473 43 18 10 5 10 5.522704286458247 18.107071248627502 0.04920005798339844 3 0.9830516302991213 9.46636200795229 7322.0 19.242380472132538 0.0 - - - - - - - 333.0 14 1 PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) 1455 183 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1732.[MT7]-FLLQHLGR.2y6_1.heavy 564.344 / 723.426 5325.0 31.075600624084473 43 18 10 5 10 5.522704286458247 18.107071248627502 0.04920005798339844 3 0.9830516302991213 9.46636200795229 5325.0 12.531617288631317 0.0 - - - - - - - 333.0 10 3 PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) 1457 183 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1732.[MT7]-FLLQHLGR.2y7_1.heavy 564.344 / 836.51 7988.0 31.075600624084473 43 18 10 5 10 5.522704286458247 18.107071248627502 0.04920005798339844 3 0.9830516302991213 9.46636200795229 7988.0 12.954090147840148 0.0 - - - - - - - 333.0 15 1 PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) 1459 184 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1834.[MT7]-VTLGTQPTVLR.2y8_1.heavy 664.905 / 871.5 11000.0 28.69832420349121 43 18 10 5 10 10.653524958150772 9.386564577716811 0.04949951171875 3 0.9837118539848321 9.656845582629831 11000.0 16.052248875562217 0.0 - - - - - - - 333.0 22 6 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 1461 184 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1834.[MT7]-VTLGTQPTVLR.2y9_1.heavy 664.905 / 984.584 3333.0 28.69832420349121 43 18 10 5 10 10.653524958150772 9.386564577716811 0.04949951171875 3 0.9837118539848321 9.656845582629831 3333.0 4.530531409295352 1.0 - - - - - - - 333.0 8 6 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 1463 184 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1834.[MT7]-VTLGTQPTVLR.2y10_1.heavy 664.905 / 1085.63 13000.0 28.69832420349121 43 18 10 5 10 10.653524958150772 9.386564577716811 0.04949951171875 3 0.9837118539848321 9.656845582629831 13000.0 19.143978010994502 0.0 - - - - - - - 333.0 26 2 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 1465 184 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1834.[MT7]-VTLGTQPTVLR.2b9_1.heavy 664.905 / 1041.61 4667.0 28.69832420349121 43 18 10 5 10 10.653524958150772 9.386564577716811 0.04949951171875 3 0.9837118539848321 9.656845582629831 4667.0 11.209910810360583 0.0 - - - - - - - 333.0 9 5 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 1467 185 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1731.[MT7]-LNQPGTPTR.2b3_1.heavy 564.318 / 500.295 57419.0 18.493499755859375 50 20 10 10 10 5.011920577259096 19.952431100711436 0.0 3 0.9906093635416859 12.725486972784847 57419.0 78.79662507864285 0.0 - - - - - - - 319.0 114 6 MAP2K2 mitogen-activated protein kinase kinase 2 1469 185 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1731.[MT7]-LNQPGTPTR.2y8_1.heavy 564.318 / 870.443 65458.0 18.493499755859375 50 20 10 10 10 5.011920577259096 19.952431100711436 0.0 3 0.9906093635416859 12.725486972784847 65458.0 193.15241165606193 0.0 - - - - - - - 273.2857142857143 130 7 MAP2K2 mitogen-activated protein kinase kinase 2 1471 185 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1731.[MT7]-LNQPGTPTR.2y6_1.heavy 564.318 / 628.341 82684.0 18.493499755859375 50 20 10 10 10 5.011920577259096 19.952431100711436 0.0 3 0.9906093635416859 12.725486972784847 82684.0 245.72949957603285 0.0 - - - - - - - 335.0 165 4 MAP2K2 mitogen-activated protein kinase kinase 2 1473 185 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1731.[MT7]-LNQPGTPTR.2y7_1.heavy 564.318 / 756.4 20671.0 18.493499755859375 50 20 10 10 10 5.011920577259096 19.952431100711436 0.0 3 0.9906093635416859 12.725486972784847 20671.0 47.397724176126985 0.0 - - - - - - - 276.3333333333333 41 9 MAP2K2 mitogen-activated protein kinase kinase 2 1475 186 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1833.[MT7]-IQETQAELPR.2y8_1.heavy 664.868 / 943.484 10846.0 24.31934928894043 43 18 10 5 10 5.3092379820136735 18.835094666838096 0.04010009765625 3 0.9853960672145371 10.199937303561127 10846.0 76.93637410071943 0.0 - - - - - - - 278.0 21 5 MCM6 minichromosome maintenance complex component 6 1477 186 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1833.[MT7]-IQETQAELPR.2y5_1.heavy 664.868 / 585.336 5006.0 24.31934928894043 43 18 10 5 10 5.3092379820136735 18.835094666838096 0.04010009765625 3 0.9853960672145371 10.199937303561127 5006.0 6.39100049651149 1.0 - - - - - - - 1191.7142857142858 12 7 MCM6 minichromosome maintenance complex component 6 1479 186 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1833.[MT7]-IQETQAELPR.2y9_1.heavy 664.868 / 1071.54 22527.0 24.31934928894043 43 18 10 5 10 5.3092379820136735 18.835094666838096 0.04010009765625 3 0.9853960672145371 10.199937303561127 22527.0 92.0413590450429 0.0 - - - - - - - 278.0 45 6 MCM6 minichromosome maintenance complex component 6 1481 186 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1833.[MT7]-IQETQAELPR.2y7_1.heavy 664.868 / 814.442 10568.0 24.31934928894043 43 18 10 5 10 5.3092379820136735 18.835094666838096 0.04010009765625 3 0.9853960672145371 10.199937303561127 10568.0 17.286618705035973 1.0 - - - - - - - 635.4285714285714 21 7 MCM6 minichromosome maintenance complex component 6 1483 187 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1730.[MT7]-NAEEFTK[MT7].2y4_1.heavy 563.803 / 668.374 18185.0 21.002199172973633 48 18 10 10 10 2.9839868725975127 23.021094499277062 0.0 3 0.9836304627511369 9.632742460168595 18185.0 93.41609589041096 0.0 - - - - - - - 316.3333333333333 36 9 UBE2L3 ubiquitin-conjugating enzyme E2L 3 1485 187 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1730.[MT7]-NAEEFTK[MT7].2b4_1.heavy 563.803 / 588.275 12927.0 21.002199172973633 48 18 10 10 10 2.9839868725975127 23.021094499277062 0.0 3 0.9836304627511369 9.632742460168595 12927.0 28.038013698630138 0.0 - - - - - - - 301.125 25 8 UBE2L3 ubiquitin-conjugating enzyme E2L 3 1487 187 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1730.[MT7]-NAEEFTK[MT7].2y3_1.heavy 563.803 / 539.331 17090.0 21.002199172973633 48 18 10 10 10 2.9839868725975127 23.021094499277062 0.0 3 0.9836304627511369 9.632742460168595 17090.0 23.14391374550758 0.0 - - - - - - - 303.2307692307692 34 13 UBE2L3 ubiquitin-conjugating enzyme E2L 3 1489 187 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1730.[MT7]-NAEEFTK[MT7].2y6_1.heavy 563.803 / 868.453 23005.0 21.002199172973633 48 18 10 10 10 2.9839868725975127 23.021094499277062 0.0 3 0.9836304627511369 9.632742460168595 23005.0 144.96301369863014 0.0 - - - - - - - 298.6363636363636 46 11 UBE2L3 ubiquitin-conjugating enzyme E2L 3 1491 188 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2234.[MT7]-EDAVNWLSGLK[MT7].3b6_1.heavy 507.283 / 859.407 6538.0 38.23680114746094 45 15 10 10 10 2.1583454537515303 36.65051181358697 0.0 3 0.9503274784886521 5.5142945317821965 6538.0 42.97458487312146 0.0 - - - - - - - 375.6666666666667 13 3 PLCG2 phospholipase C, gamma 2 (phosphatidylinositol-specific) 1493 188 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2234.[MT7]-EDAVNWLSGLK[MT7].3b4_1.heavy 507.283 / 559.284 22546.0 38.23680114746094 45 15 10 10 10 2.1583454537515303 36.65051181358697 0.0 3 0.9503274784886521 5.5142945317821965 22546.0 62.98882483370289 0.0 - - - - - - - 350.55555555555554 45 9 PLCG2 phospholipase C, gamma 2 (phosphatidylinositol-specific) 1495 188 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2234.[MT7]-EDAVNWLSGLK[MT7].3b5_1.heavy 507.283 / 673.327 29309.0 38.23680114746094 45 15 10 10 10 2.1583454537515303 36.65051181358697 0.0 3 0.9503274784886521 5.5142945317821965 29309.0 60.44413878701974 0.0 - - - - - - - 338.0 58 2 PLCG2 phospholipase C, gamma 2 (phosphatidylinositol-specific) 1497 188 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2234.[MT7]-EDAVNWLSGLK[MT7].3y4_1.heavy 507.283 / 548.352 56589.0 38.23680114746094 45 15 10 10 10 2.1583454537515303 36.65051181358697 0.0 3 0.9503274784886521 5.5142945317821965 56589.0 143.10032747740064 0.0 - - - - - - - 300.3333333333333 113 6 PLCG2 phospholipase C, gamma 2 (phosphatidylinositol-specific) 1499 189 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1645.[MT7]-TLETLIR.2y4_1.heavy 495.309 / 502.335 17546.0 32.06549835205078 48 18 10 10 10 4.962399421772036 20.151541925718412 0.0 3 0.9864276109690227 10.581367352823033 17546.0 79.06700626959247 0.0 - - - - - - - 319.0 35 4 MCM3 minichromosome maintenance complex component 3 1501 189 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1645.[MT7]-TLETLIR.2y5_1.heavy 495.309 / 631.377 16908.0 32.06549835205078 48 18 10 10 10 4.962399421772036 20.151541925718412 0.0 3 0.9864276109690227 10.581367352823033 16908.0 37.80890282131661 0.0 - - - - - - - 319.0 33 3 MCM3 minichromosome maintenance complex component 3 1503 189 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1645.[MT7]-TLETLIR.2b4_1.heavy 495.309 / 589.331 9571.0 32.06549835205078 48 18 10 10 10 4.962399421772036 20.151541925718412 0.0 3 0.9864276109690227 10.581367352823033 9571.0 36.00376175548589 0.0 - - - - - - - 319.0 19 4 MCM3 minichromosome maintenance complex component 3 1505 189 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1645.[MT7]-TLETLIR.2y6_1.heavy 495.309 / 744.461 27117.0 32.06549835205078 48 18 10 10 10 4.962399421772036 20.151541925718412 0.0 3 0.9864276109690227 10.581367352823033 27117.0 68.00501567398118 0.0 - - - - - - - 319.0 54 2 MCM3 minichromosome maintenance complex component 3 1507 190 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1644.[MT7]-TGFTFK[MT7].2y4_1.heavy 494.789 / 686.399 6618.0 28.218399047851562 48 18 10 10 10 8.396193915074063 11.91015846126011 0.0 3 0.9878509203478368 11.18536106061197 6618.0 18.394441087613295 1.0 - - - - - - - 331.0 13 1 MCM5 minichromosome maintenance complex component 5 1509 190 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1644.[MT7]-TGFTFK[MT7].2y5_1.heavy 494.789 / 743.421 32099.0 28.218399047851562 48 18 10 10 10 8.396193915074063 11.91015846126011 0.0 3 0.9878509203478368 11.18536106061197 32099.0 129.2687824773414 0.0 - - - - - - - 331.0 64 1 MCM5 minichromosome maintenance complex component 5 1511 190 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1644.[MT7]-TGFTFK[MT7].2b4_1.heavy 494.789 / 551.295 4633.0 28.218399047851562 48 18 10 10 10 8.396193915074063 11.91015846126011 0.0 3 0.9878509203478368 11.18536106061197 4633.0 7.1851158106747235 0.0 - - - - - - - 331.0 9 8 MCM5 minichromosome maintenance complex component 5 1513 190 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1644.[MT7]-TGFTFK[MT7].2y3_1.heavy 494.789 / 539.331 28128.0 28.218399047851562 48 18 10 10 10 8.396193915074063 11.91015846126011 0.0 3 0.9878509203478368 11.18536106061197 28128.0 72.80525682802286 0.0 - - - - - - - 331.0 56 2 MCM5 minichromosome maintenance complex component 5 1515 191 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2235.[MT7]-TELIQK[MT7].2y4_1.heavy 510.321 / 645.442 57424.0 22.689899444580078 50 20 10 10 10 32.31299131162195 3.094730507479609 0.0 3 0.9998074475223946 88.93666607578275 57424.0 137.65579433161065 0.0 - - - - - - - 606.0 114 8 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 1517 191 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2235.[MT7]-TELIQK[MT7].2y5_1.heavy 510.321 / 774.484 53596.0 22.689899444580078 50 20 10 10 10 32.31299131162195 3.094730507479609 0.0 3 0.9998074475223946 88.93666607578275 53596.0 112.3981333179697 0.0 - - - - - - - 583.1428571428571 107 7 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 1519 191 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2235.[MT7]-TELIQK[MT7].2b4_1.heavy 510.321 / 601.368 51809.0 22.689899444580078 50 20 10 10 10 32.31299131162195 3.094730507479609 0.0 3 0.9998074475223946 88.93666607578275 51809.0 66.86259038389481 0.0 - - - - - - - 606.0 103 8 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 1521 191 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2235.[MT7]-TELIQK[MT7].2y3_1.heavy 510.321 / 532.357 77331.0 22.689899444580078 50 20 10 10 10 32.31299131162195 3.094730507479609 0.0 3 0.9998074475223946 88.93666607578275 77331.0 111.00828987458118 0.0 - - - - - - - 255.0 154 3 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 1523 192 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1548.[MT7]-APIIR.2b3_1.heavy 357.243 / 426.283 N/A N/A - - - - - - - - - 0.0 - - - - - - - BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 1525 192 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1548.[MT7]-APIIR.2y4_1.heavy 357.243 / 498.34 N/A N/A - - - - - - - - - 0.0 - - - - - - - BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 1527 192 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1548.[MT7]-APIIR.2b4_1.heavy 357.243 / 539.367 N/A N/A - - - - - - - - - 0.0 - - - - - - - BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 1529 192 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1548.[MT7]-APIIR.2y3_1.heavy 357.243 / 401.287 N/A N/A - - - - - - - - - 0.0 - - - - - - - BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 1531 193 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2232.[MT7]-FSEAEQR.2y4_1.heavy 505.755 / 503.257 6051.0 18.971599578857422 38 16 6 10 6 2.3805810272839407 32.13901329063619 0.0 5 0.9676898432197781 6.847255042693934 6051.0 16.374825094472946 1.0 - - - - - - - 242.2 69 5 MCM7 minichromosome maintenance complex component 7 1533 193 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2232.[MT7]-FSEAEQR.2b3_1.heavy 505.755 / 508.252 6051.0 18.971599578857422 38 16 6 10 6 2.3805810272839407 32.13901329063619 0.0 5 0.9676898432197781 6.847255042693934 6051.0 1.8288898645302463 1.0 - - - - - - - 403.0 14 8 MCM7 minichromosome maintenance complex component 7 1535 193 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2232.[MT7]-FSEAEQR.2y6_1.heavy 505.755 / 719.332 23800.0 18.971599578857422 38 16 6 10 6 2.3805810272839407 32.13901329063619 0.0 5 0.9676898432197781 6.847255042693934 23800.0 114.90178757652717 0.0 - - - - - - - 252.25 47 8 MCM7 minichromosome maintenance complex component 7 1537 193 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2232.[MT7]-FSEAEQR.2b5_1.heavy 505.755 / 708.332 10085.0 18.971599578857422 38 16 6 10 6 2.3805810272839407 32.13901329063619 0.0 5 0.9676898432197781 6.847255042693934 10085.0 61.43424515178791 1.0 - - - - - - - 291.3333333333333 62 9 MCM7 minichromosome maintenance complex component 7 1539 194 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1643.[MT7]-ENISQPR.2b3_1.heavy 494.271 / 501.279 3422.0 16.802200317382812 41 15 10 10 6 3.476112683718405 28.767767071644464 0.0 5 0.9538863623347982 5.724854836349991 3422.0 12.326397896581945 2.0 - - - - - - - 346.375 12 8 EGF epidermal growth factor 1541 194 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1643.[MT7]-ENISQPR.2y5_1.heavy 494.271 / 600.346 4074.0 16.802200317382812 41 15 10 10 6 3.476112683718405 28.767767071644464 0.0 5 0.9538863623347982 5.724854836349991 4074.0 17.058312883435583 0.0 - - - - - - - 285.25 8 8 EGF epidermal growth factor 1543 194 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1643.[MT7]-ENISQPR.2b4_1.heavy 494.271 / 588.311 1956.0 16.802200317382812 41 15 10 10 6 3.476112683718405 28.767767071644464 0.0 5 0.9538863623347982 5.724854836349991 1956.0 12.76 3.0 - - - - - - - 264.875 5 8 EGF epidermal growth factor 1545 194 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1643.[MT7]-ENISQPR.2y6_1.heavy 494.271 / 714.389 16297.0 16.802200317382812 41 15 10 10 6 3.476112683718405 28.767767071644464 0.0 5 0.9538863623347982 5.724854836349991 16297.0 42.09225153374233 0.0 - - - - - - - 296.3636363636364 32 11 EGF epidermal growth factor 1547 195 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1642.[MT7]-LVQLLVR.2y4_1.heavy 492.838 / 500.355 16240.0 36.57270050048828 48 18 10 10 10 3.6028574323570557 22.086936868081146 0.0 3 0.9874486403260279 11.004281322553163 16240.0 96.14079999999998 0.0 - - - - - - - 250.0 32 4 CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 1549 195 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1642.[MT7]-LVQLLVR.2y5_1.heavy 492.838 / 628.414 46222.0 36.57270050048828 48 18 10 10 10 3.6028574323570557 22.086936868081146 0.0 3 0.9874486403260279 11.004281322553163 46222.0 85.38041157232705 0.0 - - - - - - - 694.2222222222222 92 9 CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 1551 195 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1642.[MT7]-LVQLLVR.2b4_1.heavy 492.838 / 598.404 31981.0 36.57270050048828 48 18 10 10 10 3.6028574323570557 22.086936868081146 0.0 3 0.9874486403260279 11.004281322553163 31981.0 80.9659499412942 0.0 - - - - - - - 250.0 63 3 CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 1553 195 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1642.[MT7]-LVQLLVR.2y6_1.heavy 492.838 / 727.482 104438.0 36.57270050048828 48 18 10 10 10 3.6028574323570557 22.086936868081146 0.0 3 0.9874486403260279 11.004281322553163 104438.0 121.22934971907098 0.0 - - - - - - - 250.0 208 6 CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 1555 196 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1837.[MT7]-DSTLIMQLLR.3b4_1.heavy 445.259 / 561.3 7358.0 42.519948959350586 37 14 10 3 10 1.5355034591140393 44.02820924485968 0.0764007568359375 3 0.941762616436432 5.088981702451123 7358.0 63.03783625730994 0.0 - - - - - - - 299.25 14 4 YWHAQ;SFN;YWHAB;YWHAE;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;stratifin;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 1557 196 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1837.[MT7]-DSTLIMQLLR.3b5_1.heavy 445.259 / 674.384 1540.0 42.519948959350586 37 14 10 3 10 1.5355034591140393 44.02820924485968 0.0764007568359375 3 0.941762616436432 5.088981702451123 1540.0 18.01169590643275 0.0 - - - - - - - 256.5 3 2 YWHAQ;SFN;YWHAB;YWHAE;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;stratifin;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 1559 196 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1837.[MT7]-DSTLIMQLLR.3y4_1.heavy 445.259 / 529.346 7700.0 42.519948959350586 37 14 10 3 10 1.5355034591140393 44.02820924485968 0.0764007568359375 3 0.941762616436432 5.088981702451123 7700.0 53.7547070558015 0.0 - - - - - - - 244.28571428571428 15 7 YWHAQ;SFN;YWHAB;YWHAE;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;stratifin;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 1561 196 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1837.[MT7]-DSTLIMQLLR.3y5_1.heavy 445.259 / 660.386 4962.0 42.519948959350586 37 14 10 3 10 1.5355034591140393 44.02820924485968 0.0764007568359375 3 0.941762616436432 5.088981702451123 4962.0 31.33623544843417 0.0 - - - - - - - 171.0 9 3 YWHAQ;SFN;YWHAB;YWHAE;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;stratifin;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 1563 197 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1940.[MT7]-SRDVVDDVSVSLR.3y6_1.heavy 530.957 / 660.404 9927.0 28.290600776672363 40 15 10 5 10 2.4127252753710895 35.61163421558064 0.04920005798339844 3 0.956227614873489 5.87712895417682 9927.0 33.491641845563784 1.0 - - - - - - - 331.0 19 4 RHOBTB2 Rho-related BTB domain containing 2 1565 197 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1940.[MT7]-SRDVVDDVSVSLR.3b3_1.heavy 530.957 / 503.269 5295.0 28.290600776672363 40 15 10 5 10 2.4127252753710895 35.61163421558064 0.04920005798339844 3 0.956227614873489 5.87712895417682 5295.0 3.439350453172205 2.0 - - - - - - - 945.7142857142857 17 7 RHOBTB2 Rho-related BTB domain containing 2 1567 197 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1940.[MT7]-SRDVVDDVSVSLR.3b7_1.heavy 530.957 / 931.46 8273.0 28.290600776672363 40 15 10 5 10 2.4127252753710895 35.61163421558064 0.04920005798339844 3 0.956227614873489 5.87712895417682 8273.0 32.74208459214501 0.0 - - - - - - - 331.0 16 5 RHOBTB2 Rho-related BTB domain containing 2 1569 197 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1940.[MT7]-SRDVVDDVSVSLR.3y5_1.heavy 530.957 / 561.336 35739.0 28.290600776672363 40 15 10 5 10 2.4127252753710895 35.61163421558064 0.04920005798339844 3 0.956227614873489 5.87712895417682 35739.0 35.23624577743687 0.0 - - - - - - - 735.5555555555555 71 9 RHOBTB2 Rho-related BTB domain containing 2 1571 198 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1941.[MT7]-RNEPNSYAISFR.3y7_1.heavy 533.278 / 843.436 6175.0 26.668100357055664 42 12 10 10 10 1.8321402640586166 44.850875110590636 0.0 3 0.8993652249878231 3.8572440063528064 6175.0 6.5018032381739035 1.0 - - - - - - - 309.0 15 5 PLCG1 phospholipase C, gamma 1 1573 198 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1941.[MT7]-RNEPNSYAISFR.3y6_1.heavy 533.278 / 756.404 10498.0 26.668100357055664 42 12 10 10 10 1.8321402640586166 44.850875110590636 0.0 3 0.8993652249878231 3.8572440063528064 10498.0 41.120046761307634 0.0 - - - - - - - 309.0 20 7 PLCG1 phospholipase C, gamma 1 1575 198 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1941.[MT7]-RNEPNSYAISFR.3b3_1.heavy 533.278 / 544.296 4631.0 26.668100357055664 42 12 10 10 10 1.8321402640586166 44.850875110590636 0.0 3 0.8993652249878231 3.8572440063528064 4631.0 7.199722984118691 1.0 - - - - - - - 309.0 9 4 PLCG1 phospholipase C, gamma 1 1577 198 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1941.[MT7]-RNEPNSYAISFR.3y4_1.heavy 533.278 / 522.304 25318.0 26.668100357055664 42 12 10 10 10 1.8321402640586166 44.850875110590636 0.0 3 0.8993652249878231 3.8572440063528064 25318.0 25.546292998795714 0.0 - - - - - - - 309.0 50 5 PLCG1 phospholipase C, gamma 1 1579 199 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1942.[MT7]-APVILVGC[CAM]QLDLR.2y8_1.heavy 799.464 / 960.493 12462.0 36.893699645996094 47 17 10 10 10 3.1610521130417655 25.31932220821413 0.0 3 0.9730825878871694 7.505276573751851 12462.0 36.328295206937476 0.0 - - - - - - - 427.75 24 4 RHOBTB2 Rho-related BTB domain containing 2 1581 199 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1942.[MT7]-APVILVGC[CAM]QLDLR.2y9_1.heavy 799.464 / 1073.58 10752.0 36.893699645996094 47 17 10 10 10 3.1610521130417655 25.31932220821413 0.0 3 0.9730825878871694 7.505276573751851 10752.0 30.170584358338438 0.0 - - - - - - - 366.5 21 6 RHOBTB2 Rho-related BTB domain containing 2 1583 199 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1942.[MT7]-APVILVGC[CAM]QLDLR.2y10_1.heavy 799.464 / 1186.66 7819.0 36.893699645996094 47 17 10 10 10 3.1610521130417655 25.31932220821413 0.0 3 0.9730825878871694 7.505276573751851 7819.0 14.397524053224156 0.0 - - - - - - - 293.0 15 5 RHOBTB2 Rho-related BTB domain containing 2 1585 199 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1942.[MT7]-APVILVGC[CAM]QLDLR.2y7_1.heavy 799.464 / 861.425 14417.0 36.893699645996094 47 17 10 10 10 3.1610521130417655 25.31932220821413 0.0 3 0.9730825878871694 7.505276573751851 14417.0 18.523417709514476 1.0 - - - - - - - 824.5 35 8 RHOBTB2 Rho-related BTB domain containing 2 1587 200 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1947.[MT7]-TQRPADVIFATVR.3y7_1.heavy 539.978 / 805.493 23876.0 31.292299270629883 48 18 10 10 10 2.6161620224933926 30.417279329491524 0.0 3 0.9821416989578374 9.221336278486111 23876.0 44.8724824120603 0.0 - - - - - - - 332.0 47 5 MCM7 minichromosome maintenance complex component 7 1589 200 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1947.[MT7]-TQRPADVIFATVR.3b6_1.heavy 539.978 / 813.433 24208.0 31.292299270629883 48 18 10 10 10 2.6161620224933926 30.417279329491524 0.0 3 0.9821416989578374 9.221336278486111 24208.0 96.2721249621602 0.0 - - - - - - - 332.0 48 2 MCM7 minichromosome maintenance complex component 7 1591 200 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1947.[MT7]-TQRPADVIFATVR.3y5_1.heavy 539.978 / 593.341 42778.0 31.292299270629883 48 18 10 10 10 2.6161620224933926 30.417279329491524 0.0 3 0.9821416989578374 9.221336278486111 42778.0 148.4118440697463 0.0 - - - - - - - 332.0 85 3 MCM7 minichromosome maintenance complex component 7 1593 200 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1947.[MT7]-TQRPADVIFATVR.3b8_2.heavy 539.978 / 513.297 33493.0 31.292299270629883 48 18 10 10 10 2.6161620224933926 30.417279329491524 0.0 3 0.9821416989578374 9.221336278486111 33493.0 151.39987552018027 0.0 - - - - - - - 332.0 66 1 MCM7 minichromosome maintenance complex component 7 1595 201 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1948.[MT7]-RLFWTDTGINPR.3y7_1.heavy 540.631 / 772.395 27090.0 32.36389923095703 47 17 10 10 10 3.8947347484193444 25.675689478104875 0.0 3 0.9788001080802985 8.46107017593175 27090.0 62.92464899806076 0.0 - - - - - - - 319.0 54 4 EGF epidermal growth factor 1597 201 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1948.[MT7]-RLFWTDTGINPR.3y6_1.heavy 540.631 / 657.368 31234.0 32.36389923095703 47 17 10 10 10 3.8947347484193444 25.675689478104875 0.0 3 0.9788001080802985 8.46107017593175 31234.0 61.773332107223325 0.0 - - - - - - - 756.625 62 8 EGF epidermal growth factor 1599 201 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1948.[MT7]-RLFWTDTGINPR.3y8_1.heavy 540.631 / 873.443 5099.0 32.36389923095703 47 17 10 10 10 3.8947347484193444 25.675689478104875 0.0 3 0.9788001080802985 8.46107017593175 5099.0 23.989035594946927 0.0 - - - - - - - 319.0 10 2 EGF epidermal growth factor 1601 201 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1948.[MT7]-RLFWTDTGINPR.3y5_1.heavy 540.631 / 556.32 27728.0 32.36389923095703 47 17 10 10 10 3.8947347484193444 25.675689478104875 0.0 3 0.9788001080802985 8.46107017593175 27728.0 82.70518053375197 0.0 - - - - - - - 319.0 55 6 EGF epidermal growth factor 1603 202 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1949.[MT7]-DNNELLLFILK[MT7].3y3_1.heavy 540.659 / 517.383 11226.0 45.411800384521484 45 15 10 10 10 2.1646218228353997 46.197446105856855 0.0 3 0.9590763154309395 6.079707547269064 11226.0 115.21562042634427 0.0 - - - - - - - 280.625 22 8 MCM2 minichromosome maintenance complex component 2 1605 202 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1949.[MT7]-DNNELLLFILK[MT7].3b6_1.heavy 540.659 / 843.433 8644.0 45.411800384521484 45 15 10 10 10 2.1646218228353997 46.197446105856855 0.0 3 0.9590763154309395 6.079707547269064 8644.0 53.44007008166295 0.0 - - - - - - - 202.1 17 10 MCM2 minichromosome maintenance complex component 2 1607 202 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1949.[MT7]-DNNELLLFILK[MT7].3b4_1.heavy 540.659 / 617.265 13359.0 45.411800384521484 45 15 10 10 10 2.1646218228353997 46.197446105856855 0.0 3 0.9590763154309395 6.079707547269064 13359.0 116.31236 0.0 - - - - - - - 272.7142857142857 26 7 MCM2 minichromosome maintenance complex component 2 1609 202 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1949.[MT7]-DNNELLLFILK[MT7].3b5_1.heavy 540.659 / 730.349 13247.0 45.411800384521484 45 15 10 10 10 2.1646218228353997 46.197446105856855 0.0 3 0.9590763154309395 6.079707547269064 13247.0 86.54982031180401 0.0 - - - - - - - 168.25 26 8 MCM2 minichromosome maintenance complex component 2 1611 203 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1943.[MT7]-ELIINEILVMK[MT7].2b3_1.heavy 801.991 / 500.32 10727.0 43.19889831542969 48 18 10 10 10 8.310722822465419 12.032647717438191 0.0 3 0.9804751825372725 8.817789128827156 10727.0 40.640135306553915 0.0 - - - - - - - 347.1 21 10 PAK2 p21 protein (Cdc42/Rac)-activated kinase 2 1613 203 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1943.[MT7]-ELIINEILVMK[MT7].2y3_1.heavy 801.991 / 521.324 5048.0 43.19889831542969 48 18 10 10 10 8.310722822465419 12.032647717438191 0.0 3 0.9804751825372725 8.817789128827156 5048.0 22.013563915136388 0.0 - - - - - - - 263.0833333333333 10 12 PAK2 p21 protein (Cdc42/Rac)-activated kinase 2 1615 203 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1943.[MT7]-ELIINEILVMK[MT7].2b5_1.heavy 801.991 / 727.447 3786.0 43.19889831542969 48 18 10 10 10 8.310722822465419 12.032647717438191 0.0 3 0.9804751825372725 8.817789128827156 3786.0 12.301349765415102 0.0 - - - - - - - 280.77777777777777 7 9 PAK2 p21 protein (Cdc42/Rac)-activated kinase 2 1617 203 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1943.[MT7]-ELIINEILVMK[MT7].2y7_1.heavy 801.991 / 990.577 4575.0 43.19889831542969 48 18 10 10 10 8.310722822465419 12.032647717438191 0.0 3 0.9804751825372725 8.817789128827156 4575.0 15.935412760369168 0.0 - - - - - - - 280.6666666666667 9 9 PAK2 p21 protein (Cdc42/Rac)-activated kinase 2 1619 204 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1945.[MT7]-YLIANATNPESK[MT7].3b4_1.heavy 536.966 / 605.378 22517.0 27.22920036315918 44 14 10 10 10 1.3884332028294761 49.028423667234485 0.0 3 0.9353200977991981 4.826236341325747 22517.0 16.311598438488314 0.0 - - - - - - - 322.0 45 5 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 1621 204 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1945.[MT7]-YLIANATNPESK[MT7].3b5_1.heavy 536.966 / 719.421 20265.0 27.22920036315918 44 14 10 10 10 1.3884332028294761 49.028423667234485 0.0 3 0.9353200977991981 4.826236341325747 20265.0 60.57438569206843 0.0 - - - - - - - 322.0 40 9 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 1623 204 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1945.[MT7]-YLIANATNPESK[MT7].3y4_1.heavy 536.966 / 604.342 37314.0 27.22920036315918 44 14 10 10 10 1.3884332028294761 49.028423667234485 0.0 3 0.9353200977991981 4.826236341325747 37314.0 9.973037271033471 1.0 - - - - - - - 322.0 83 3 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 1625 204 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1945.[MT7]-YLIANATNPESK[MT7].3b3_1.heavy 536.966 / 534.341 23161.0 27.22920036315918 44 14 10 10 10 1.3884332028294761 49.028423667234485 0.0 3 0.9353200977991981 4.826236341325747 23161.0 24.48613184079602 0.0 - - - - - - - 322.0 46 2 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 1627 205 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1946.[MT7]-SDTTHLVTLGGVLR.3y7_1.heavy 538.31 / 715.446 30994.0 32.0166015625 50 20 10 10 10 14.787091093464575 6.762655303056652 0.0 3 0.995082058850824 17.591082245964525 30994.0 131.46061919504643 0.0 - - - - - - - 323.0 61 7 KLHL13 kelch-like 13 (Drosophila) 1629 205 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1946.[MT7]-SDTTHLVTLGGVLR.3b4_1.heavy 538.31 / 549.264 11945.0 32.0166015625 50 20 10 10 10 14.787091093464575 6.762655303056652 0.0 3 0.995082058850824 17.591082245964525 11945.0 21.271337048823362 1.0 - - - - - - - 717.7777777777778 23 9 KLHL13 kelch-like 13 (Drosophila) 1631 205 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1946.[MT7]-SDTTHLVTLGGVLR.3y8_1.heavy 538.31 / 814.515 20340.0 32.0166015625 50 20 10 10 10 14.787091093464575 6.762655303056652 0.0 3 0.995082058850824 17.591082245964525 20340.0 93.13578947368421 0.0 - - - - - - - 323.0 40 3 KLHL13 kelch-like 13 (Drosophila) 1633 205 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1946.[MT7]-SDTTHLVTLGGVLR.3y5_1.heavy 538.31 / 501.314 13560.0 32.0166015625 50 20 10 10 10 14.787091093464575 6.762655303056652 0.0 3 0.995082058850824 17.591082245964525 13560.0 27.292607639808026 0.0 - - - - - - - 323.0 27 6 KLHL13 kelch-like 13 (Drosophila) 1635 206 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1636.[MT7]-QLEAIVR.2b3_1.heavy 486.802 / 515.295 7310.0 26.901899337768555 40 12 10 10 8 1.723496345851709 45.40482393646721 0.0 4 0.8945191976098698 3.766015765895118 7310.0 9.663641160775647 0.0 - - - - - - - 318.0 14 4 MCM5 minichromosome maintenance complex component 5 1637 206 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1636.[MT7]-QLEAIVR.2b4_1.heavy 486.802 / 586.332 21295.0 26.901899337768555 40 12 10 10 8 1.723496345851709 45.40482393646721 0.0 4 0.8945191976098698 3.766015765895118 21295.0 24.19541518224171 0.0 - - - - - - - 318.0 42 4 MCM5 minichromosome maintenance complex component 5 1639 206 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1636.[MT7]-QLEAIVR.2y6_1.heavy 486.802 / 700.435 47039.0 26.901899337768555 40 12 10 10 8 1.723496345851709 45.40482393646721 0.0 4 0.8945191976098698 3.766015765895118 47039.0 80.32252655286258 0.0 - - - - - - - 318.0 94 1 MCM5 minichromosome maintenance complex component 5 1641 206 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1636.[MT7]-QLEAIVR.2b5_1.heavy 486.802 / 699.416 14938.0 26.901899337768555 40 12 10 10 8 1.723496345851709 45.40482393646721 0.0 4 0.8945191976098698 3.766015765895118 14938.0 46.706716698466536 1.0 - - - - - - - 318.0 29 1 MCM5 minichromosome maintenance complex component 5 1643 207 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1635.[MT7]-YFLLK[MT7].2b3_1.heavy 486.312 / 568.325 49576.0 35.0901985168457 40 10 10 10 10 1.056356622463197 61.04821414853722 0.0 3 0.8260411361607757 2.9149580461209452 49576.0 80.50740876147223 0.0 - - - - - - - 271.0 99 3 AKT3;AKT1;AKT2;C1GALT1C1;QRICH1 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 1;v-akt murine thymoma viral oncogene homolog 2;C1GALT1-specific chaperone 1;glutamine-rich 1 1645 207 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1635.[MT7]-YFLLK[MT7].2y4_1.heavy 486.312 / 664.451 133827.0 35.0901985168457 40 10 10 10 10 1.056356622463197 61.04821414853722 0.0 3 0.8260411361607757 2.9149580461209452 133827.0 199.34021996582382 0.0 - - - - - - - 271.0 267 1 AKT3;AKT1;AKT2;C1GALT1C1;QRICH1 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 1;v-akt murine thymoma viral oncogene homolog 2;C1GALT1-specific chaperone 1;glutamine-rich 1 1647 207 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1635.[MT7]-YFLLK[MT7].2y3_1.heavy 486.312 / 517.383 69352.0 35.0901985168457 40 10 10 10 10 1.056356622463197 61.04821414853722 0.0 3 0.8260411361607757 2.9149580461209452 69352.0 292.6162262617088 0.0 - - - - - - - 271.0 138 5 AKT3;AKT1;AKT2;C1GALT1C1;QRICH1 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 1;v-akt murine thymoma viral oncogene homolog 2;C1GALT1-specific chaperone 1;glutamine-rich 1 1649 207 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1635.[MT7]-YFLLK[MT7].2y1_1.heavy 486.312 / 291.215 95629.0 35.0901985168457 40 10 10 10 10 1.056356622463197 61.04821414853722 0.0 3 0.8260411361607757 2.9149580461209452 95629.0 40.21953990821616 0.0 - - - - - - - 813.0 191 2 AKT3;AKT1;AKT2;C1GALT1C1;QRICH1 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 1;v-akt murine thymoma viral oncogene homolog 2;C1GALT1-specific chaperone 1;glutamine-rich 1 1651 208 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1749.[MT7]-ELLEAVDAR.2b3_1.heavy 580.326 / 500.32 27333.0 30.41670036315918 50 20 10 10 10 14.185786649053412 7.049309458398826 0.0 3 0.9988262120960163 36.0184537541774 27333.0 41.76161028194361 0.0 - - - - - - - 333.0 54 4 PML promyelocytic leukemia 1653 208 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1749.[MT7]-ELLEAVDAR.2y8_1.heavy 580.326 / 886.499 36667.0 30.41670036315918 50 20 10 10 10 14.185786649053412 7.049309458398826 0.0 3 0.9988262120960163 36.0184537541774 36667.0 27.866857144081596 0.0 - - - - - - - 333.0 73 3 PML promyelocytic leukemia 1655 208 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1749.[MT7]-ELLEAVDAR.2b4_1.heavy 580.326 / 629.363 39000.0 30.41670036315918 50 20 10 10 10 14.185786649053412 7.049309458398826 0.0 3 0.9988262120960163 36.0184537541774 39000.0 84.07354649756891 0.0 - - - - - - - 333.0 78 2 PML promyelocytic leukemia 1657 208 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1749.[MT7]-ELLEAVDAR.2y6_1.heavy 580.326 / 660.331 27333.0 30.41670036315918 50 20 10 10 10 14.185786649053412 7.049309458398826 0.0 3 0.9988262120960163 36.0184537541774 27333.0 41.76161028194361 0.0 - - - - - - - 333.0 54 4 PML promyelocytic leukemia 1659 209 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1638.[MT7]-AEVAAAAAR.2y8_1.heavy 487.281 / 758.416 41312.0 17.81800079345703 48 18 10 10 10 8.346749930180863 11.980711155417726 0.0 3 0.9807259207135969 8.87514626214111 41312.0 74.65421062441752 0.0 - - - - - - - 268.5 82 4 UBA7 ubiquitin-like modifier activating enzyme 7 1661 209 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1638.[MT7]-AEVAAAAAR.2b4_1.heavy 487.281 / 515.295 16811.0 17.81800079345703 48 18 10 10 10 8.346749930180863 11.980711155417726 0.0 3 0.9807259207135969 8.87514626214111 16811.0 94.54230912476723 1.0 - - - - - - - 238.66666666666666 45 6 UBA7 ubiquitin-like modifier activating enzyme 7 1663 209 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1638.[MT7]-AEVAAAAAR.2y6_1.heavy 487.281 / 530.305 48287.0 17.81800079345703 48 18 10 10 10 8.346749930180863 11.980711155417726 0.0 3 0.9807259207135969 8.87514626214111 48287.0 106.41827706258601 0.0 - - - - - - - 298.3333333333333 96 6 UBA7 ubiquitin-like modifier activating enzyme 7 1665 209 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1638.[MT7]-AEVAAAAAR.2y7_1.heavy 487.281 / 629.373 32549.0 17.81800079345703 48 18 10 10 10 8.346749930180863 11.980711155417726 0.0 3 0.9807259207135969 8.87514626214111 32549.0 143.95507448789573 0.0 - - - - - - - 313.25 65 8 UBA7 ubiquitin-like modifier activating enzyme 7 1667 210 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1746.[MT7]-GIQNQAEPR.2b4_1.heavy 578.813 / 557.316 4706.0 17.144100189208984 41 11 10 10 10 1.5344323873391108 57.75840712108789 0.0 3 0.8776884541032365 3.4922014828319763 4706.0 11.80001488095238 0.0 - - - - - - - 240.0 9 7 BUB1 budding uninhibited by benzimidazoles 1 homolog (yeast) 1669 210 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1746.[MT7]-GIQNQAEPR.2y6_1.heavy 578.813 / 714.353 6218.0 17.144100189208984 41 11 10 10 10 1.5344323873391108 57.75840712108789 0.0 3 0.8776884541032365 3.4922014828319763 6218.0 11.424962744762079 1.0 - - - - - - - 294.0 14 4 BUB1 budding uninhibited by benzimidazoles 1 homolog (yeast) 1671 210 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1746.[MT7]-GIQNQAEPR.2b7_1.heavy 578.813 / 885.455 19999.0 17.144100189208984 41 11 10 10 10 1.5344323873391108 57.75840712108789 0.0 3 0.8776884541032365 3.4922014828319763 19999.0 95.23333333333332 0.0 - - - - - - - 196.0 39 6 BUB1 budding uninhibited by benzimidazoles 1 homolog (yeast) 1673 210 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1746.[MT7]-GIQNQAEPR.2y7_1.heavy 578.813 / 842.411 10251.0 17.144100189208984 41 11 10 10 10 1.5344323873391108 57.75840712108789 0.0 3 0.8776884541032365 3.4922014828319763 10251.0 50.441428571428574 0.0 - - - - - - - 210.0 20 4 BUB1 budding uninhibited by benzimidazoles 1 homolog (yeast) 1675 211 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1841.[MT7]-RIPEEILGK[MT7].3b6_1.heavy 448.281 / 882.516 7150.0 27.783974647521973 34 11 10 5 8 1.3236155283409252 46.84546857713687 0.045299530029296875 4 0.8685558706025281 3.3660121018081006 7150.0 10.607142857142856 1.0 - - - - - - - 325.0 18 2 MAP2K2 mitogen-activated protein kinase kinase 2 1677 211 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1841.[MT7]-RIPEEILGK[MT7].3y3_1.heavy 448.281 / 461.32 127403.0 27.783974647521973 34 11 10 5 8 1.3236155283409252 46.84546857713687 0.045299530029296875 4 0.8685558706025281 3.3660121018081006 127403.0 20.447329709700128 1.0 - - - - - - - 975.0 254 1 MAP2K2 mitogen-activated protein kinase kinase 2 1679 211 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1841.[MT7]-RIPEEILGK[MT7].3b4_1.heavy 448.281 / 640.39 18850.0 27.783974647521973 34 11 10 5 8 1.3236155283409252 46.84546857713687 0.045299530029296875 4 0.8685558706025281 3.3660121018081006 18850.0 18.550793650793647 1.0 - - - - - - - 325.0 40 3 MAP2K2 mitogen-activated protein kinase kinase 2 1681 211 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1841.[MT7]-RIPEEILGK[MT7].3b5_1.heavy 448.281 / 769.432 50376.0 27.783974647521973 34 11 10 5 8 1.3236155283409252 46.84546857713687 0.045299530029296875 4 0.8685558706025281 3.3660121018081006 50376.0 0.8601337005431423 1.0 - - - - - - - 325.0 116 1 MAP2K2 mitogen-activated protein kinase kinase 2 1683 212 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1639.[MT7]-SLEVILR.2y4_1.heavy 487.312 / 500.355 14243.0 32.778099060058594 45 20 10 5 10 9.350604632440692 10.694495589414952 0.04759979248046875 3 0.9962534400207992 20.1562779792001 14243.0 41.15064516129032 1.0 - - - - - - - 310.0 28 6 MCM6 minichromosome maintenance complex component 6 1685 212 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1639.[MT7]-SLEVILR.2y5_1.heavy 487.312 / 629.398 10837.0 32.778099060058594 45 20 10 5 10 9.350604632440692 10.694495589414952 0.04759979248046875 3 0.9962534400207992 20.1562779792001 10837.0 43.18648131742144 0.0 - - - - - - - 310.0 21 2 MCM6 minichromosome maintenance complex component 6 1687 212 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1639.[MT7]-SLEVILR.2b4_1.heavy 487.312 / 573.336 26937.0 32.778099060058594 45 20 10 5 10 9.350604632440692 10.694495589414952 0.04759979248046875 3 0.9962534400207992 20.1562779792001 26937.0 104.3059486163948 0.0 - - - - - - - 310.0 53 2 MCM6 minichromosome maintenance complex component 6 1689 212 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1639.[MT7]-SLEVILR.2y6_1.heavy 487.312 / 742.482 23222.0 32.778099060058594 45 20 10 5 10 9.350604632440692 10.694495589414952 0.04759979248046875 3 0.9962534400207992 20.1562779792001 23222.0 62.01218264119182 0.0 - - - - - - - 310.0 46 3 MCM6 minichromosome maintenance complex component 6 1691 213 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1745.[MT7]-K[MT7]AILC[CAM]LLLGGVER.3y7_1.heavy 577.358 / 743.441 36802.0 42.31864929199219 42 16 10 6 10 3.047694447487262 32.81168821974499 0.03900146484375 3 0.9687313810261529 6.960971036810612 36802.0 133.4500872257136 0.0 - - - - - - - 287.4 73 5 MCM3 minichromosome maintenance complex component 3 1693 213 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1745.[MT7]-K[MT7]AILC[CAM]LLLGGVER.3y6_1.heavy 577.358 / 630.357 86889.0 42.31864929199219 42 16 10 6 10 3.047694447487262 32.81168821974499 0.03900146484375 3 0.9687313810261529 6.960971036810612 86889.0 220.11317207663012 0.0 - - - - - - - 279.44444444444446 173 9 MCM3 minichromosome maintenance complex component 3 1695 213 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1745.[MT7]-K[MT7]AILC[CAM]LLLGGVER.3b4_1.heavy 577.358 / 714.512 12387.0 42.31864929199219 42 16 10 6 10 3.047694447487262 32.81168821974499 0.03900146484375 3 0.9687313810261529 6.960971036810612 12387.0 48.1333286908078 0.0 - - - - - - - 269.5 24 10 MCM3 minichromosome maintenance complex component 3 1697 213 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1745.[MT7]-K[MT7]AILC[CAM]LLLGGVER.3y5_1.heavy 577.358 / 517.273 82939.0 42.31864929199219 42 16 10 6 10 3.047694447487262 32.81168821974499 0.03900146484375 3 0.9687313810261529 6.960971036810612 82939.0 447.54087308868503 0.0 - - - - - - - 239.66666666666666 165 6 MCM3 minichromosome maintenance complex component 3 1699 214 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2372.[MT7]-ARAETEELIR.3b6_1.heavy 444.585 / 802.417 6153.0 22.81839942932129 41 11 10 10 10 3.954813752153535 25.285640808128193 0.0 3 0.8596245654860489 3.254620894027022 6153.0 16.07528315804683 0.0 - - - - - - - 256.0 12 5 PML promyelocytic leukemia 1701 214 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2372.[MT7]-ARAETEELIR.3y4_1.heavy 444.585 / 530.33 29740.0 22.81839942932129 41 11 10 10 10 3.954813752153535 25.285640808128193 0.0 3 0.8596245654860489 3.254620894027022 29740.0 28.301716068642744 0.0 - - - - - - - 256.0 59 2 PML promyelocytic leukemia 1703 214 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2372.[MT7]-ARAETEELIR.3y5_1.heavy 444.585 / 659.372 14357.0 22.81839942932129 41 11 10 10 10 3.954813752153535 25.285640808128193 0.0 3 0.8596245654860489 3.254620894027022 14357.0 59.39666514376218 0.0 - - - - - - - 256.0 28 4 PML promyelocytic leukemia 1705 214 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2372.[MT7]-ARAETEELIR.3b7_1.heavy 444.585 / 931.46 1282.0 22.81839942932129 41 11 10 10 10 3.954813752153535 25.285640808128193 0.0 3 0.8596245654860489 3.254620894027022 1282.0 7.007032772904483 0.0 - - - - - - - 256.0 2 1 PML promyelocytic leukemia 1707 215 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2373.[MT7]-DSTLIMQLLR.2y5_1.heavy 667.385 / 660.386 54532.0 42.55830001831055 45 15 10 10 10 4.718937237886565 21.191212122326565 0.0 3 0.9571252313911414 5.9387828060809555 54532.0 185.1045567091724 0.0 - - - - - - - 187.88888888888889 109 9 YWHAQ;SFN;YWHAB;YWHAE;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;stratifin;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 1709 215 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2373.[MT7]-DSTLIMQLLR.2b4_1.heavy 667.385 / 561.3 44202.0 42.55830001831055 45 15 10 10 10 4.718937237886565 21.191212122326565 0.0 3 0.9571252313911414 5.9387828060809555 44202.0 64.46578721564764 0.0 - - - - - - - 282.3333333333333 88 3 YWHAQ;SFN;YWHAB;YWHAE;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;stratifin;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 1711 215 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2373.[MT7]-DSTLIMQLLR.2y9_1.heavy 667.385 / 1074.63 42000.0 42.55830001831055 45 15 10 10 10 4.718937237886565 21.191212122326565 0.0 3 0.9571252313911414 5.9387828060809555 42000.0 73.18993615488849 0.0 - - - - - - - 715.1111111111111 84 9 YWHAQ;SFN;YWHAB;YWHAE;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;stratifin;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 1713 215 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2373.[MT7]-DSTLIMQLLR.2y6_1.heavy 667.385 / 773.47 56395.0 42.55830001831055 45 15 10 10 10 4.718937237886565 21.191212122326565 0.0 3 0.9571252313911414 5.9387828060809555 56395.0 87.09101265822784 0.0 - - - - - - - 282.3333333333333 112 3 YWHAQ;SFN;YWHAB;YWHAE;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;stratifin;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 1715 216 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1843.[MT7]-TILPLINFK[MT7].2y4_1.heavy 673.936 / 665.41 23114.0 41.362701416015625 44 14 10 10 10 1.7218803874346846 46.81101906785189 0.0 3 0.9453531841154738 5.25511333381074 23114.0 49.09437994722955 0.0 - - - - - - - 719.7 46 10 PLCG2 phospholipase C, gamma 2 (phosphatidylinositol-specific) 1717 216 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1843.[MT7]-TILPLINFK[MT7].2y3_1.heavy 673.936 / 552.326 19135.0 41.362701416015625 44 14 10 10 10 1.7218803874346846 46.81101906785189 0.0 3 0.9453531841154738 5.25511333381074 19135.0 66.5536937920889 0.0 - - - - - - - 324.7142857142857 38 7 PLCG2 phospholipase C, gamma 2 (phosphatidylinositol-specific) 1719 216 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1843.[MT7]-TILPLINFK[MT7].2y6_1.heavy 673.936 / 875.547 118220.0 41.362701416015625 44 14 10 10 10 1.7218803874346846 46.81101906785189 0.0 3 0.9453531841154738 5.25511333381074 118220.0 659.4940920492743 0.0 - - - - - - - 227.0 236 5 PLCG2 phospholipase C, gamma 2 (phosphatidylinositol-specific) 1721 216 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1843.[MT7]-TILPLINFK[MT7].2y7_1.heavy 673.936 / 988.631 16293.0 41.362701416015625 44 14 10 10 10 1.7218803874346846 46.81101906785189 0.0 3 0.9453531841154738 5.25511333381074 16293.0 86.16081768388105 0.0 - - - - - - - 216.14285714285714 32 7 PLCG2 phospholipase C, gamma 2 (phosphatidylinositol-specific) 1723 217 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1747.[MT7]-AIQEPDDAR.2y8_1.heavy 579.797 / 943.448 20228.0 18.712099075317383 46 16 10 10 10 1.983311180640039 36.542424676533756 0.0 3 0.9638663402955931 6.472766248682036 20228.0 151.57333333333332 0.0 - - - - - - - 243.5 40 8 TTK TTK protein kinase 1725 217 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1747.[MT7]-AIQEPDDAR.2y5_1.heavy 579.797 / 573.263 25674.0 18.712099075317383 46 16 10 10 10 1.983311180640039 36.542424676533756 0.0 3 0.9638663402955931 6.472766248682036 25674.0 35.73969157769869 0.0 - - - - - - - 778.1428571428571 51 7 TTK TTK protein kinase 1727 217 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1747.[MT7]-AIQEPDDAR.2b4_1.heavy 579.797 / 586.332 27619.0 18.712099075317383 46 16 10 10 10 1.983311180640039 36.542424676533756 0.0 3 0.9638663402955931 6.472766248682036 27619.0 37.00124015073656 0.0 - - - - - - - 713.5555555555555 55 9 TTK TTK protein kinase 1729 217 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1747.[MT7]-AIQEPDDAR.2y7_1.heavy 579.797 / 830.364 17700.0 18.712099075317383 46 16 10 10 10 1.983311180640039 36.542424676533756 0.0 3 0.9638663402955931 6.472766248682036 17700.0 49.42031728703736 0.0 - - - - - - - 219.25 35 8 TTK TTK protein kinase 1731 218 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2374.[MT7]-AFVNVGDLSK[MT7].2y5_1.heavy 669.387 / 663.379 12591.0 30.658700942993164 47 17 10 10 10 8.926724364871536 11.202317436115784 0.0 3 0.9794142826991192 8.586803364621865 12591.0 12.826952990327609 0.0 - - - - - - - 331.0 25 1 ZBTB17 zinc finger and BTB domain containing 17 1733 218 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2374.[MT7]-AFVNVGDLSK[MT7].2b4_1.heavy 669.387 / 576.326 13254.0 30.658700942993164 47 17 10 10 10 8.926724364871536 11.202317436115784 0.0 3 0.9794142826991192 8.586803364621865 13254.0 15.003018791997267 0.0 - - - - - - - 331.0 26 3 ZBTB17 zinc finger and BTB domain containing 17 1735 218 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2374.[MT7]-AFVNVGDLSK[MT7].2y6_1.heavy 669.387 / 762.448 5633.0 30.658700942993164 47 17 10 10 10 8.926724364871536 11.202317436115784 0.0 3 0.9794142826991192 8.586803364621865 5633.0 17.012990632617456 0.0 - - - - - - - 331.0 11 4 ZBTB17 zinc finger and BTB domain containing 17 1737 218 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2374.[MT7]-AFVNVGDLSK[MT7].2y7_1.heavy 669.387 / 876.491 10272.0 30.658700942993164 47 17 10 10 10 8.926724364871536 11.202317436115784 0.0 3 0.9794142826991192 8.586803364621865 10272.0 43.42312203524217 0.0 - - - - - - - 331.0 20 5 ZBTB17 zinc finger and BTB domain containing 17 1739 219 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1842.[MT7]-LTSFITVFK[MT7].2y4_1.heavy 672.412 / 638.399 11395.0 41.76235008239746 40 14 10 6 10 1.9012932001780356 35.19322386379278 0.037899017333984375 3 0.9454705035382324 5.260815932558943 11395.0 38.879491833030855 0.0 - - - - - - - 267.6363636363636 22 11 CUL2 cullin 2 1741 219 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1842.[MT7]-LTSFITVFK[MT7].2y8_1.heavy 672.412 / 1086.63 6801.0 41.76235008239746 40 14 10 6 10 1.9012932001780356 35.19322386379278 0.037899017333984375 3 0.9454705035382324 5.260815932558943 6801.0 54.518885869565224 0.0 - - - - - - - 262.85714285714283 13 7 CUL2 cullin 2 1743 219 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1842.[MT7]-LTSFITVFK[MT7].2b4_1.heavy 672.412 / 593.341 7903.0 41.76235008239746 40 14 10 6 10 1.9012932001780356 35.19322386379278 0.037899017333984375 3 0.9454705035382324 5.260815932558943 7903.0 25.81742286751361 0.0 - - - - - - - 299.0 15 8 CUL2 cullin 2 1745 219 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1842.[MT7]-LTSFITVFK[MT7].2y3_1.heavy 672.412 / 537.352 4044.0 41.76235008239746 40 14 10 6 10 1.9012932001780356 35.19322386379278 0.037899017333984375 3 0.9454705035382324 5.260815932558943 4044.0 2.435753176043557 2.0 - - - - - - - 603.5714285714286 9 7 CUL2 cullin 2 1747 220 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1742.[MT7]-DPEVQDFR.2y5_1.heavy 575.286 / 664.341 3057.0 24.339399337768555 42 14 10 10 8 0.9011975514837215 68.57940496474158 0.0 4 0.9325515374367578 4.725029698197467 3057.0 6.048021582733813 2.0 - - - - - - - 278.0 13 7 PIK3CA phosphoinositide-3-kinase, catalytic, alpha polypeptide 1749 220 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1742.[MT7]-DPEVQDFR.2b4_1.heavy 575.286 / 585.3 2779.0 24.339399337768555 42 14 10 10 8 0.9011975514837215 68.57940496474158 0.0 4 0.9325515374367578 4.725029698197467 2779.0 9.596546762589927 3.0 - - - - - - - 278.0 6 3 PIK3CA phosphoinositide-3-kinase, catalytic, alpha polypeptide 1751 220 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1742.[MT7]-DPEVQDFR.2b6_1.heavy 575.286 / 828.386 11671.0 24.339399337768555 42 14 10 10 8 0.9011975514837215 68.57940496474158 0.0 4 0.9325515374367578 4.725029698197467 11671.0 55.416258992805766 0.0 - - - - - - - 278.0 23 7 PIK3CA phosphoinositide-3-kinase, catalytic, alpha polypeptide 1753 220 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1742.[MT7]-DPEVQDFR.2y7_1.heavy 575.286 / 890.437 20285.0 24.339399337768555 42 14 10 10 8 0.9011975514837215 68.57940496474158 0.0 4 0.9325515374367578 4.725029698197467 20285.0 39.88896882494005 0.0 - - - - - - - 278.0 40 6 PIK3CA phosphoinositide-3-kinase, catalytic, alpha polypeptide 1755 221 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1845.[MT7]-DILGASDPYVR.2y4_1.heavy 675.363 / 534.304 88000.0 30.634450912475586 42 17 10 5 10 2.594468650741716 29.475831099129874 0.04850006103515625 3 0.9777390106627465 8.256218510437554 88000.0 64.74770681525932 0.0 - - - - - - - 333.0 176 2 NEDD4 neural precursor cell expressed, developmentally down-regulated 4 1757 221 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1845.[MT7]-DILGASDPYVR.2y8_1.heavy 675.363 / 864.421 27667.0 30.634450912475586 42 17 10 5 10 2.594468650741716 29.475831099129874 0.04850006103515625 3 0.9777390106627465 8.256218510437554 27667.0 157.85975975975975 0.0 - - - - - - - 333.0 55 4 NEDD4 neural precursor cell expressed, developmentally down-regulated 4 1759 221 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1845.[MT7]-DILGASDPYVR.2y10_1.heavy 675.363 / 1090.59 5667.0 30.634450912475586 42 17 10 5 10 2.594468650741716 29.475831099129874 0.04850006103515625 3 0.9777390106627465 8.256218510437554 5667.0 17.811057657657656 1.0 - - - - - - - 333.0 11 5 NEDD4 neural precursor cell expressed, developmentally down-regulated 4 1761 221 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1845.[MT7]-DILGASDPYVR.2b7_1.heavy 675.363 / 816.422 37667.0 30.634450912475586 42 17 10 5 10 2.594468650741716 29.475831099129874 0.04850006103515625 3 0.9777390106627465 8.256218510437554 37667.0 67.77518748125937 0.0 - - - - - - - 333.0 75 2 NEDD4 neural precursor cell expressed, developmentally down-regulated 4 1763 222 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1741.[MT7]-NILNVC[CAM]K[MT7].2y4_1.heavy 574.839 / 664.357 26938.0 26.621599197387695 46 16 10 10 10 3.1123854389154855 32.1296966467126 0.0 3 0.9612865689100712 6.252020603050218 26938.0 106.11495479573108 0.0 - - - - - - - 313.0 53 7 PIK3CA phosphoinositide-3-kinase, catalytic, alpha polypeptide 1765 222 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1741.[MT7]-NILNVC[CAM]K[MT7].2y5_1.heavy 574.839 / 777.441 22239.0 26.621599197387695 46 16 10 10 10 3.1123854389154855 32.1296966467126 0.0 3 0.9612865689100712 6.252020603050218 22239.0 39.751018245572325 0.0 - - - - - - - 313.0 44 3 PIK3CA phosphoinositide-3-kinase, catalytic, alpha polypeptide 1767 222 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1741.[MT7]-NILNVC[CAM]K[MT7].2b4_1.heavy 574.839 / 599.363 11276.0 26.621599197387695 46 16 10 10 10 3.1123854389154855 32.1296966467126 0.0 3 0.9612865689100712 6.252020603050218 11276.0 49.53514376996806 0.0 - - - - - - - 313.0 22 5 PIK3CA phosphoinositide-3-kinase, catalytic, alpha polypeptide 1769 222 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1741.[MT7]-NILNVC[CAM]K[MT7].2y3_1.heavy 574.839 / 550.314 8770.0 26.621599197387695 46 16 10 10 10 3.1123854389154855 32.1296966467126 0.0 3 0.9612865689100712 6.252020603050218 8770.0 0.4044739287366288 2.0 - - - - - - - 665.25 22 8 PIK3CA phosphoinositide-3-kinase, catalytic, alpha polypeptide 1771 223 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 EFTU1_ECO24.FESEVYILSK.2y8.peptide 607.82 / 938.52 1988700.0 31.870899200439453 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 1988700.0 95.5673901422021 0.0 - - - - - - - 12253.0 3977 1 1773 223 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 EFTU1_ECO24.FESEVYILSK.2y6.peptide 607.82 / 722.44 659629.0 31.870899200439453 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 659629.0 89.48799356688701 0.0 - - - - - - - 3869.0 1319 2 1775 223 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 EFTU1_ECO24.FESEVYILSK.2y5.peptide 607.82 / 623.38 976104.0 31.870899200439453 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 976104.0 113.84438095211569 0.0 - - - - - - - 4514.0 1952 1 1777 224 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1630.[MT7]-TTDIVIR.2y4_1.heavy 481.294 / 500.355 47502.0 24.840599060058594 47 17 10 10 10 2.378109551859936 33.387560713028016 0.0 3 0.976026963603846 7.954802392211284 47502.0 214.8109090909091 0.0 - - - - - - - 286.0 95 8 UBE2O ubiquitin-conjugating enzyme E2O 1779 224 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1630.[MT7]-TTDIVIR.2b4_1.heavy 481.294 / 575.316 23179.0 24.840599060058594 47 17 10 10 10 2.378109551859936 33.387560713028016 0.0 3 0.976026963603846 7.954802392211284 23179.0 3.8190265832290557 1.0 - - - - - - - 653.7142857142857 49 7 UBE2O ubiquitin-conjugating enzyme E2O 1781 224 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1630.[MT7]-TTDIVIR.2y6_1.heavy 481.294 / 716.43 38917.0 24.840599060058594 47 17 10 10 10 2.378109551859936 33.387560713028016 0.0 3 0.976026963603846 7.954802392211284 38917.0 148.89408411857738 0.0 - - - - - - - 286.0 77 2 UBE2O ubiquitin-conjugating enzyme E2O 1783 224 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1630.[MT7]-TTDIVIR.2b5_1.heavy 481.294 / 674.384 19459.0 24.840599060058594 47 17 10 10 10 2.378109551859936 33.387560713028016 0.0 3 0.976026963603846 7.954802392211284 19459.0 29.23098689956332 1.0 - - - - - - - 286.0 104 5 UBE2O ubiquitin-conjugating enzyme E2O 1785 225 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1847.[MT7]-ENLVFLAQK[MT7].2b3_1.heavy 675.405 / 501.279 19197.0 32.80189895629883 44 14 10 10 10 1.454219547669525 45.84360509628965 0.0 3 0.9361103010546722 4.856318174080718 19197.0 18.51764588079205 0.0 - - - - - - - 707.5714285714286 38 7 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 1787 225 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1847.[MT7]-ENLVFLAQK[MT7].2y5_1.heavy 675.405 / 750.463 26318.0 32.80189895629883 44 14 10 10 10 1.454219547669525 45.84360509628965 0.0 3 0.9361103010546722 4.856318174080718 26318.0 67.9708936737785 0.0 - - - - - - - 310.0 52 4 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 1789 225 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1847.[MT7]-ENLVFLAQK[MT7].2b4_1.heavy 675.405 / 600.347 19816.0 32.80189895629883 44 14 10 10 10 1.454219547669525 45.84360509628965 0.0 3 0.9361103010546722 4.856318174080718 19816.0 69.81931482870718 0.0 - - - - - - - 812.75 39 8 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 1791 225 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1847.[MT7]-ENLVFLAQK[MT7].2b5_1.heavy 675.405 / 747.416 6192.0 32.80189895629883 44 14 10 10 10 1.454219547669525 45.84360509628965 0.0 3 0.9361103010546722 4.856318174080718 6192.0 16.168516253341007 0.0 - - - - - - - 310.0 12 3 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 1793 226 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1632.[MT7]-AILAEFR.2y4_1.heavy 482.291 / 522.267 8228.0 33.1606502532959 41 16 10 5 10 2.00677024927884 39.48385357504638 0.046901702880859375 3 0.965072876547669 6.584286689615253 8228.0 34.53062295081967 0.0 - - - - - - - 305.0 16 6 ORC1 origin recognition complex, subunit 1 1795 226 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1632.[MT7]-AILAEFR.2y5_1.heavy 482.291 / 635.351 7314.0 33.1606502532959 41 16 10 5 10 2.00677024927884 39.48385357504638 0.046901702880859375 3 0.965072876547669 6.584286689615253 7314.0 12.710557377049179 0.0 - - - - - - - 305.0 14 3 ORC1 origin recognition complex, subunit 1 1797 226 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1632.[MT7]-AILAEFR.2b4_1.heavy 482.291 / 513.352 3657.0 33.1606502532959 41 16 10 5 10 2.00677024927884 39.48385357504638 0.046901702880859375 3 0.965072876547669 6.584286689615253 3657.0 6.055347489350717 0.0 - - - - - - - 305.0 7 2 ORC1 origin recognition complex, subunit 1 1799 226 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1632.[MT7]-AILAEFR.2y6_1.heavy 482.291 / 748.435 10667.0 33.1606502532959 41 16 10 5 10 2.00677024927884 39.48385357504638 0.046901702880859375 3 0.965072876547669 6.584286689615253 10667.0 36.725901881413144 0.0 - - - - - - - 305.0 21 2 ORC1 origin recognition complex, subunit 1 1801 227 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1740.[MT7]-DIGYIFK[MT7].2y5_1.heavy 572.336 / 771.452 13806.0 34.50389862060547 43 18 10 5 10 4.803752771014369 16.660861869802677 0.04560089111328125 3 0.9854185168499036 10.20780538937226 13806.0 44.079083469721766 0.0 - - - - - - - 282.0 27 4 RB1 retinoblastoma 1 1803 227 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1740.[MT7]-DIGYIFK[MT7].2b4_1.heavy 572.336 / 593.305 14651.0 34.50389862060547 43 18 10 5 10 4.803752771014369 16.660861869802677 0.04560089111328125 3 0.9854185168499036 10.20780538937226 14651.0 24.45508447102753 0.0 - - - - - - - 282.0 29 4 RB1 retinoblastoma 1 1805 227 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1740.[MT7]-DIGYIFK[MT7].2y3_1.heavy 572.336 / 551.367 15779.0 34.50389862060547 43 18 10 5 10 4.803752771014369 16.660861869802677 0.04560089111328125 3 0.9854185168499036 10.20780538937226 15779.0 6.99989157026135 0.0 - - - - - - - 282.0 31 3 RB1 retinoblastoma 1 1807 227 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1740.[MT7]-DIGYIFK[MT7].2y6_1.heavy 572.336 / 884.536 11270.0 34.50389862060547 43 18 10 5 10 4.803752771014369 16.660861869802677 0.04560089111328125 3 0.9854185168499036 10.20780538937226 11270.0 40.76439706245061 0.0 - - - - - - - 282.0 22 2 RB1 retinoblastoma 1 1809 228 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1633.[MT7]-GVLTQFR.2y4_1.heavy 482.788 / 551.294 13000.0 29.03790044784546 28 13 0 5 10 1.6049838942173533 45.301949881001605 0.04879951477050781 3 0.922472496597725 4.403397606768657 13000.0 12.176042296043363 0.0 - - - - - - - 333.0 26 5 UBE2O ubiquitin-conjugating enzyme E2O 1811 228 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1633.[MT7]-GVLTQFR.2y5_1.heavy 482.788 / 664.378 11000.0 29.03790044784546 28 13 0 5 10 1.6049838942173533 45.301949881001605 0.04879951477050781 3 0.922472496597725 4.403397606768657 11000.0 47.212970091530806 0.0 - - - - - - - 333.0 22 3 UBE2O ubiquitin-conjugating enzyme E2O 1813 228 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1633.[MT7]-GVLTQFR.2y6_1.heavy 482.788 / 763.446 9333.0 29.03790044784546 28 13 0 5 10 1.6049838942173533 45.301949881001605 0.04879951477050781 3 0.922472496597725 4.403397606768657 9333.0 47.64594594594595 0.0 - - - - - - - 333.0 18 3 UBE2O ubiquitin-conjugating enzyme E2O 1815 228 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1633.[MT7]-GVLTQFR.2b5_1.heavy 482.788 / 643.39 3333.0 29.03790044784546 28 13 0 5 10 1.6049838942173533 45.301949881001605 0.04879951477050781 3 0.922472496597725 4.403397606768657 3333.0 6.0186987496393245 6.0 - - - - - - - 667.0 266 8 UBE2O ubiquitin-conjugating enzyme E2O 1817 229 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2498.[MT7]-NIIGLLNVFTPQK[MT7].3y3_1.heavy 582.357 / 516.326 158778.0 45.29059982299805 44 14 10 10 10 1.9742530560056986 44.42865774474787 0.0 3 0.9472602346909801 5.350148410551438 158778.0 249.9802906098721 0.0 - - - - - - - 350.25 317 4 MAPK8 mitogen-activated protein kinase 8 1819 229 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2498.[MT7]-NIIGLLNVFTPQK[MT7].3b4_1.heavy 582.357 / 542.342 62694.0 45.29059982299805 44 14 10 10 10 1.9742530560056986 44.42865774474787 0.0 3 0.9472602346909801 5.350148410551438 62694.0 222.98018966044663 0.0 - - - - - - - 204.25 125 8 MAPK8 mitogen-activated protein kinase 8 1821 229 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2498.[MT7]-NIIGLLNVFTPQK[MT7].3b5_1.heavy 582.357 / 655.426 83475.0 45.29059982299805 44 14 10 10 10 1.9742530560056986 44.42865774474787 0.0 3 0.9472602346909801 5.350148410551438 83475.0 114.3895986959225 0.0 - - - - - - - 389.0 166 3 MAPK8 mitogen-activated protein kinase 8 1823 229 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2498.[MT7]-NIIGLLNVFTPQK[MT7].3b7_1.heavy 582.357 / 882.553 53121.0 45.29059982299805 44 14 10 10 10 1.9742530560056986 44.42865774474787 0.0 3 0.9472602346909801 5.350148410551438 53121.0 39.51837844153978 1.0 - - - - - - - 204.0 107 4 MAPK8 mitogen-activated protein kinase 8 1825 230 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1670.[MT7]-EIQILLR.2y4_1.heavy 514.833 / 514.371 472793.0 34.43560028076172 32 2 10 10 10 0.32440005786280934 125.90775781012873 0.0 3 0.41420233520715566 1.525997514113594 472793.0 142.9890695238199 0.0 - - - - - - - 2254.0 945 2 MAPK3 mitogen-activated protein kinase 3 1827 230 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1670.[MT7]-EIQILLR.2y5_1.heavy 514.833 / 642.43 51280.0 34.43560028076172 32 2 10 10 10 0.32440005786280934 125.90775781012873 0.0 3 0.41420233520715566 1.525997514113594 51280.0 53.05676285617694 0.0 - - - - - - - 282.0 102 5 MAPK3 mitogen-activated protein kinase 3 1829 230 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1670.[MT7]-EIQILLR.2b4_1.heavy 514.833 / 628.379 40292.0 34.43560028076172 32 2 10 10 10 0.32440005786280934 125.90775781012873 0.0 3 0.41420233520715566 1.525997514113594 40292.0 97.74920445565236 0.0 - - - - - - - 282.0 80 2 MAPK3 mitogen-activated protein kinase 3 1831 230 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1670.[MT7]-EIQILLR.2y6_1.heavy 514.833 / 755.514 69031.0 34.43560028076172 32 2 10 10 10 0.32440005786280934 125.90775781012873 0.0 3 0.41420233520715566 1.525997514113594 69031.0 148.12085993432063 0.0 - - - - - - - 684.4285714285714 138 7 MAPK3 mitogen-activated protein kinase 3 1833 231 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1910.[MT7]-ERAPVSGTQEK[MT7].3y6_1.heavy 497.279 / 793.417 7376.0 15.787799835205078 45 15 10 10 10 28.410700364855803 3.5198005932898635 0.0 3 0.9556298440468628 5.837109737028817 7376.0 26.640180586907448 0.0 - - - - - - - 258.5 14 4 RAF1 v-raf-1 murine leukemia viral oncogene homolog 1 1835 231 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1910.[MT7]-ERAPVSGTQEK[MT7].3b5_1.heavy 497.279 / 697.411 5016.0 15.787799835205078 45 15 10 10 10 28.410700364855803 3.5198005932898635 0.0 3 0.9556298440468628 5.837109737028817 5016.0 38.3150710032066 0.0 - - - - - - - 188.1818181818182 10 11 RAF1 v-raf-1 murine leukemia viral oncogene homolog 1 1837 231 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1910.[MT7]-ERAPVSGTQEK[MT7].3y5_1.heavy 497.279 / 706.385 3983.0 15.787799835205078 45 15 10 10 10 28.410700364855803 3.5198005932898635 0.0 3 0.9556298440468628 5.837109737028817 3983.0 21.32972972972973 1.0 - - - - - - - 213.44444444444446 7 9 RAF1 v-raf-1 murine leukemia viral oncogene homolog 1 1839 231 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1910.[MT7]-ERAPVSGTQEK[MT7].3b7_1.heavy 497.279 / 841.465 2508.0 15.787799835205078 45 15 10 10 10 28.410700364855803 3.5198005932898635 0.0 3 0.9556298440468628 5.837109737028817 2508.0 13.425995547163433 1.0 - - - - - - - 221.5 7 2 RAF1 v-raf-1 murine leukemia viral oncogene homolog 1 1841 232 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1911.[MT7]-AFEDDAIQLVAR.2y8_1.heavy 746.4 / 885.515 8144.0 35.465999603271484 44 14 10 10 10 1.8341324960206922 37.70766071925807 0.0 3 0.9479765041965762 5.387181297670466 8144.0 29.473523809523808 0.0 - - - - - - - 263.0 16 8 ORC1 origin recognition complex, subunit 1 1843 232 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1911.[MT7]-AFEDDAIQLVAR.2b6_1.heavy 746.4 / 793.349 7618.0 35.465999603271484 44 14 10 10 10 1.8341324960206922 37.70766071925807 0.0 3 0.9479765041965762 5.387181297670466 7618.0 39.415529241354335 0.0 - - - - - - - 263.0 15 6 ORC1 origin recognition complex, subunit 1 1845 232 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1911.[MT7]-AFEDDAIQLVAR.2b5_1.heavy 746.4 / 722.311 4991.0 35.465999603271484 44 14 10 10 10 1.8341324960206922 37.70766071925807 0.0 3 0.9479765041965762 5.387181297670466 4991.0 17.16632603758533 0.0 - - - - - - - 263.0 9 3 ORC1 origin recognition complex, subunit 1 1847 232 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1911.[MT7]-AFEDDAIQLVAR.2y7_1.heavy 746.4 / 770.488 9457.0 35.465999603271484 44 14 10 10 10 1.8341324960206922 37.70766071925807 0.0 3 0.9479765041965762 5.387181297670466 9457.0 19.49937874009283 0.0 - - - - - - - 263.0 18 8 ORC1 origin recognition complex, subunit 1 1849 233 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1916.[MT7]-SEDDESGAGELTR.2y8_1.heavy 755.343 / 790.405 3699.0 19.65079975128174 39 13 10 6 10 1.6799273743784424 39.79041077809421 0.035999298095703125 3 0.9236592886024514 4.437944870521018 3699.0 30.67463414634146 0.0 - - - - - - - 246.2 7 5 MCM7 minichromosome maintenance complex component 7 1851 233 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1916.[MT7]-SEDDESGAGELTR.2b4_1.heavy 755.343 / 591.238 11713.0 19.65079975128174 39 13 10 6 10 1.6799273743784424 39.79041077809421 0.035999298095703125 3 0.9236592886024514 4.437944870521018 11713.0 33.63010578480641 0.0 - - - - - - - 296.55555555555554 23 9 MCM7 minichromosome maintenance complex component 7 1853 233 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1916.[MT7]-SEDDESGAGELTR.2y9_1.heavy 755.343 / 919.448 6986.0 19.65079975128174 39 13 10 6 10 1.6799273743784424 39.79041077809421 0.035999298095703125 3 0.9236592886024514 4.437944870521018 6986.0 29.40579075425791 0.0 - - - - - - - 256.5 13 8 MCM7 minichromosome maintenance complex component 7 1855 233 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1916.[MT7]-SEDDESGAGELTR.2y10_1.heavy 755.343 / 1034.47 6781.0 19.65079975128174 39 13 10 6 10 1.6799273743784424 39.79041077809421 0.035999298095703125 3 0.9236592886024514 4.437944870521018 6781.0 39.46060864745011 0.0 - - - - - - - 205.0 13 8 MCM7 minichromosome maintenance complex component 7 1857 234 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1917.[MT7]-FFTGSLAEVEK[MT7].2y5_1.heavy 758.419 / 719.406 8235.0 34.41284942626953 41 16 10 5 10 9.412146161510467 10.62456938980981 0.045501708984375 3 0.963225404581786 6.415764821654113 8235.0 36.53556338028169 0.0 - - - - - - - 284.0 16 8 TRIM32 tripartite motif-containing 32 1859 234 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1917.[MT7]-FFTGSLAEVEK[MT7].2y9_1.heavy 758.419 / 1077.59 6247.0 34.41284942626953 41 16 10 5 10 9.412146161510467 10.62456938980981 0.045501708984375 3 0.963225404581786 6.415764821654113 6247.0 26.395774647887322 0.0 - - - - - - - 284.0 12 5 TRIM32 tripartite motif-containing 32 1861 234 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1917.[MT7]-FFTGSLAEVEK[MT7].2y3_1.heavy 758.419 / 519.326 11074.0 34.41284942626953 41 16 10 5 10 9.412146161510467 10.62456938980981 0.045501708984375 3 0.963225404581786 6.415764821654113 11074.0 39.45480517108414 0.0 - - - - - - - 639.0 22 8 TRIM32 tripartite motif-containing 32 1863 234 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1917.[MT7]-FFTGSLAEVEK[MT7].2y10_1.heavy 758.419 / 1224.66 9654.0 34.41284942626953 41 16 10 5 10 9.412146161510467 10.62456938980981 0.045501708984375 3 0.963225404581786 6.415764821654113 9654.0 62.886971830985914 0.0 - - - - - - - 284.0 19 5 TRIM32 tripartite motif-containing 32 1865 235 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1914.[MT7]-LLHQFSFSPER.3y7_1.heavy 502.272 / 869.415 5374.0 32.51060104370117 46 16 10 10 10 1.883100076574907 41.715741013076524 0.0 3 0.9631080980689617 6.4054930044387435 5374.0 15.645822784810125 0.0 - - - - - - - 316.0 10 2 ANAPC2;LOC650621 anaphase promoting complex subunit 2;anaphase-promoting complex subunit 2-like 1867 235 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1914.[MT7]-LLHQFSFSPER.3y6_1.heavy 502.272 / 722.347 14225.0 32.51060104370117 46 16 10 10 10 1.883100076574907 41.715741013076524 0.0 3 0.9631080980689617 6.4054930044387435 14225.0 64.82278481012658 0.0 - - - - - - - 316.0 28 2 ANAPC2;LOC650621 anaphase promoting complex subunit 2;anaphase-promoting complex subunit 2-like 1869 235 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1914.[MT7]-LLHQFSFSPER.3b3_1.heavy 502.272 / 508.336 9483.0 32.51060104370117 46 16 10 10 10 1.883100076574907 41.715741013076524 0.0 3 0.9631080980689617 6.4054930044387435 9483.0 36.874165348101265 0.0 - - - - - - - 316.0 18 1 ANAPC2;LOC650621 anaphase promoting complex subunit 2;anaphase-promoting complex subunit 2-like 1871 235 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1914.[MT7]-LLHQFSFSPER.3y5_1.heavy 502.272 / 635.315 5374.0 32.51060104370117 46 16 10 10 10 1.883100076574907 41.715741013076524 0.0 3 0.9631080980689617 6.4054930044387435 5374.0 -0.37778558875219675 2.0 - - - - - - - 316.0 11 2 ANAPC2;LOC650621 anaphase promoting complex subunit 2;anaphase-promoting complex subunit 2-like 1873 236 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2397.[MT7]-NLQEILHGAVR.3y6_1.heavy 465.273 / 652.389 46108.0 31.725400924682617 44 14 10 10 10 2.2644948536923404 34.25349234532604 0.0 3 0.935039802024546 4.815697524424435 46108.0 207.52929076989744 0.0 - - - - - - - 322.0 92 5 EGFR epidermal growth factor receptor 1875 236 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2397.[MT7]-NLQEILHGAVR.3b4_1.heavy 465.273 / 629.338 105114.0 31.725400924682617 44 14 10 10 10 2.2644948536923404 34.25349234532604 0.0 3 0.935039802024546 4.815697524424435 105114.0 167.38761396557874 0.0 - - - - - - - 322.0 210 1 EGFR epidermal growth factor receptor 1877 236 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2397.[MT7]-NLQEILHGAVR.3b3_1.heavy 465.273 / 500.295 38370.0 31.725400924682617 44 14 10 10 10 2.2644948536923404 34.25349234532604 0.0 3 0.935039802024546 4.815697524424435 38370.0 128.678571015777 0.0 - - - - - - - 322.0 76 8 EGFR epidermal growth factor receptor 1879 236 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2397.[MT7]-NLQEILHGAVR.3y5_1.heavy 465.273 / 539.305 150255.0 31.725400924682617 44 14 10 10 10 2.2644948536923404 34.25349234532604 0.0 3 0.935039802024546 4.815697524424435 150255.0 392.548459863998 0.0 - - - - - - - 322.0 300 4 EGFR epidermal growth factor receptor 1881 237 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1854.[MT7]-VIPLDRDNK[MT7].3y7_1.heavy 453.273 / 1001.55 1834.0 23.47800064086914 38 8 10 10 10 2.549464826859098 39.22391826962307 0.0 3 0.7872098991231242 2.626431927431548 1834.0 0.45499999999999985 2.0 - - - - - - - 262.0 4 3 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 1883 237 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1854.[MT7]-VIPLDRDNK[MT7].3y3_1.heavy 453.273 / 520.285 8907.0 23.47800064086914 38 8 10 10 10 2.549464826859098 39.22391826962307 0.0 3 0.7872098991231242 2.626431927431548 8907.0 3.376347809325186 0.0 - - - - - - - 262.0 17 2 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 1885 237 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1854.[MT7]-VIPLDRDNK[MT7].3y7_2.heavy 453.273 / 501.278 80688.0 23.47800064086914 38 8 10 10 10 2.549464826859098 39.22391826962307 0.0 3 0.7872098991231242 2.626431927431548 80688.0 63.033905602287014 0.0 - - - - - - - 262.0 161 3 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 1887 237 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1854.[MT7]-VIPLDRDNK[MT7].3y8_2.heavy 453.273 / 557.82 37724.0 23.47800064086914 38 8 10 10 10 2.549464826859098 39.22391826962307 0.0 3 0.7872098991231242 2.626431927431548 37724.0 84.95099236641221 0.0 - - - - - - - 262.0 75 1 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 1889 238 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1714.[MT7]-EVAQTADAR.2y8_1.heavy 552.792 / 831.432 10319.0 15.870699882507324 39 9 10 10 10 0.6817783380380318 84.17806308841548 0.0 3 0.8157990524021528 2.83017109710839 10319.0 45.99511065094487 1.0 - - - - - - - 272.1818181818182 20 11 PLCG1 phospholipase C, gamma 1 1891 238 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1714.[MT7]-EVAQTADAR.2b4_1.heavy 552.792 / 572.316 4935.0 15.870699882507324 39 9 10 10 10 0.6817783380380318 84.17806308841548 0.0 3 0.8157990524021528 2.83017109710839 4935.0 11.65619324995717 0.0 - - - - - - - 299.42857142857144 9 7 PLCG1 phospholipase C, gamma 1 1893 238 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1714.[MT7]-EVAQTADAR.2b7_1.heavy 552.792 / 859.428 22433.0 15.870699882507324 39 9 10 10 10 0.6817783380380318 84.17806308841548 0.0 3 0.8157990524021528 2.83017109710839 22433.0 114.9897824224773 0.0 - - - - - - - 249.55555555555554 44 9 PLCG1 phospholipase C, gamma 1 1895 238 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1714.[MT7]-EVAQTADAR.2y7_1.heavy 552.792 / 732.364 12712.0 15.870699882507324 39 9 10 10 10 0.6817783380380318 84.17806308841548 0.0 3 0.8157990524021528 2.83017109710839 12712.0 82.43668227424749 0.0 - - - - - - - 235.14285714285714 25 7 PLCG1 phospholipase C, gamma 1 1897 239 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1853.[MT7]-EETGISLQDLLLEIYR.3b6_1.heavy 679.373 / 761.38 4251.0 48.19449996948242 48 18 10 10 10 10.552285380145188 9.476620125168004 0.0 3 0.9869843942639477 10.805826717265393 4251.0 17.980060422960726 0.0 - - - - - - - 134.1578947368421 8 19 ATM;LOC651610 ataxia telangiectasia mutated;serine-protein kinase ATM-like 1899 239 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1853.[MT7]-EETGISLQDLLLEIYR.3y6_1.heavy 679.373 / 806.477 5951.0 48.19449996948242 48 18 10 10 10 10.552285380145188 9.476620125168004 0.0 3 0.9869843942639477 10.805826717265393 5951.0 45.57682502290276 0.0 - - - - - - - 166.28571428571428 11 21 ATM;LOC651610 ataxia telangiectasia mutated;serine-protein kinase ATM-like 1901 239 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1853.[MT7]-EETGISLQDLLLEIYR.3y8_1.heavy 679.373 / 1034.59 2598.0 48.19449996948242 48 18 10 10 10 10.552285380145188 9.476620125168004 0.0 3 0.9869843942639477 10.805826717265393 2598.0 68.79211267605635 0.0 - - - - - - - 125.75 5 12 ATM;LOC651610 ataxia telangiectasia mutated;serine-protein kinase ATM-like 1903 239 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1853.[MT7]-EETGISLQDLLLEIYR.3y5_1.heavy 679.373 / 693.393 7463.0 48.19449996948242 48 18 10 10 10 10.552285380145188 9.476620125168004 0.0 3 0.9869843942639477 10.805826717265393 7463.0 68.70698412698412 0.0 - - - - - - - 126.8125 14 16 ATM;LOC651610 ataxia telangiectasia mutated;serine-protein kinase ATM-like 1905 240 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1713.[MT7]-SLLAGLLK[MT7].2y4_1.heavy 551.876 / 574.404 87812.0 39.66339874267578 48 18 10 10 10 19.525489651476395 5.121510486290858 0.0 3 0.9893366965543539 11.940700660391096 87812.0 185.72424514187583 0.0 - - - - - - - 305.77777777777777 175 9 AKT2 v-akt murine thymoma viral oncogene homolog 2 1907 240 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1713.[MT7]-SLLAGLLK[MT7].2y5_1.heavy 551.876 / 645.442 93314.0 39.66339874267578 48 18 10 10 10 19.525489651476395 5.121510486290858 0.0 3 0.9893366965543539 11.940700660391096 93314.0 250.00151061843178 0.0 - - - - - - - 264.75 186 4 AKT2 v-akt murine thymoma viral oncogene homolog 2 1909 240 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1713.[MT7]-SLLAGLLK[MT7].2y6_1.heavy 551.876 / 758.526 50360.0 39.66339874267578 48 18 10 10 10 19.525489651476395 5.121510486290858 0.0 3 0.9893366965543539 11.940700660391096 50360.0 292.0746344618404 0.0 - - - - - - - 362.7142857142857 100 7 AKT2 v-akt murine thymoma viral oncogene homolog 2 1911 240 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1713.[MT7]-SLLAGLLK[MT7].2b5_1.heavy 551.876 / 586.368 25815.0 39.66339874267578 48 18 10 10 10 19.525489651476395 5.121510486290858 0.0 3 0.9893366965543539 11.940700660391096 25815.0 108.17402985340799 0.0 - - - - - - - 242.14285714285714 51 7 AKT2 v-akt murine thymoma viral oncogene homolog 2 1913 241 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1919.[MT7]-EDAVNWLSGLK[MT7].2y4_1.heavy 760.422 / 548.352 6815.0 38.23680114746094 47 17 10 10 10 3.4376699193266047 23.279511250439164 0.0 3 0.979038536394695 8.509225151600356 6815.0 10.573061411809865 0.0 - - - - - - - 368.875 13 8 PLCG2 phospholipase C, gamma 2 (phosphatidylinositol-specific) 1915 241 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1919.[MT7]-EDAVNWLSGLK[MT7].2b4_1.heavy 760.422 / 559.284 8405.0 38.23680114746094 47 17 10 10 10 3.4376699193266047 23.279511250439164 0.0 3 0.979038536394695 8.509225151600356 8405.0 17.270854838787844 0.0 - - - - - - - 340.5 16 12 PLCG2 phospholipase C, gamma 2 (phosphatidylinositol-specific) 1917 241 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1919.[MT7]-EDAVNWLSGLK[MT7].2b5_1.heavy 760.422 / 673.327 7042.0 38.23680114746094 47 17 10 10 10 3.4376699193266047 23.279511250439164 0.0 3 0.979038536394695 8.509225151600356 7042.0 9.33105707288126 1.0 - - - - - - - 288.90909090909093 15 11 PLCG2 phospholipase C, gamma 2 (phosphatidylinositol-specific) 1919 241 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1919.[MT7]-EDAVNWLSGLK[MT7].2y7_1.heavy 760.422 / 961.559 8405.0 38.23680114746094 47 17 10 10 10 3.4376699193266047 23.279511250439164 0.0 3 0.979038536394695 8.509225151600356 8405.0 22.20771240119607 0.0 - - - - - - - 317.8 16 10 PLCG2 phospholipase C, gamma 2 (phosphatidylinositol-specific) 1921 242 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1712.[MT7]-EVLLVLK[MT7].2y4_1.heavy 551.378 / 616.451 17139.0 35.670799255371094 48 18 10 10 10 3.091418797454889 25.90318169067134 0.0 3 0.9863179977515945 10.538799109882682 17139.0 72.97656561666832 0.0 - - - - - - - 260.0 34 4 CUL5 cullin 5 1923 242 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1712.[MT7]-EVLLVLK[MT7].2y5_1.heavy 551.378 / 729.536 15062.0 35.670799255371094 48 18 10 10 10 3.091418797454889 25.90318169067134 0.0 3 0.9863179977515945 10.538799109882682 15062.0 74.17518159375925 0.0 - - - - - - - 260.0 30 3 CUL5 cullin 5 1925 242 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1712.[MT7]-EVLLVLK[MT7].2b4_1.heavy 551.378 / 599.388 14023.0 35.670799255371094 48 18 10 10 10 3.091418797454889 25.90318169067134 0.0 3 0.9863179977515945 10.538799109882682 14023.0 64.76310656588113 0.0 - - - - - - - 260.0 28 4 CUL5 cullin 5 1927 242 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1712.[MT7]-EVLLVLK[MT7].2y3_1.heavy 551.378 / 503.367 15581.0 35.670799255371094 48 18 10 10 10 3.091418797454889 25.90318169067134 0.0 3 0.9863179977515945 10.538799109882682 15581.0 15.819207714975068 1.0 - - - - - - - 630.4285714285714 34 7 CUL5 cullin 5 1929 243 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1918.[MT7]-ADQQYEC[CAM]VAEIGEGAYGK[MT7].3y7_1.heavy 759.363 / 825.422 55000.0 29.925800323486328 43 13 10 10 10 1.5311732254387915 52.14260938877777 0.0 3 0.9252607988450356 4.485856703780926 55000.0 107.89647676161918 0.0 - - - - - - - 333.0 110 4 CDK6 cyclin-dependent kinase 6 1931 243 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1918.[MT7]-ADQQYEC[CAM]VAEIGEGAYGK[MT7].3b6_1.heavy 759.363 / 879.396 30333.0 29.925800323486328 43 13 10 10 10 1.5311732254387915 52.14260938877777 0.0 3 0.9252607988450356 4.485856703780926 30333.0 171.24936936936936 0.0 - - - - - - - 333.0 60 5 CDK6 cyclin-dependent kinase 6 1933 243 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1918.[MT7]-ADQQYEC[CAM]VAEIGEGAYGK[MT7].3b4_1.heavy 759.363 / 587.291 34333.0 29.925800323486328 43 13 10 10 10 1.5311732254387915 52.14260938877777 0.0 3 0.9252607988450356 4.485856703780926 34333.0 133.13935301801803 0.0 - - - - - - - 333.0 68 4 CDK6 cyclin-dependent kinase 6 1935 243 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1918.[MT7]-ADQQYEC[CAM]VAEIGEGAYGK[MT7].3b5_1.heavy 759.363 / 750.354 25333.0 29.925800323486328 43 13 10 10 10 1.5311732254387915 52.14260938877777 0.0 3 0.9252607988450356 4.485856703780926 25333.0 34.96828207051763 0.0 - - - - - - - 333.0 50 6 CDK6 cyclin-dependent kinase 6 1937 244 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1719.[MT7]-YIVSASGDR.2b3_1.heavy 556.297 / 520.325 5446.0 23.15049934387207 46 16 10 10 10 2.19248546532829 36.536185623208766 0.0 3 0.9678940253106905 6.869111813548709 5446.0 1.3036716929680527 1.0 - - - - - - - 259.0 11 3 FBXW11;BTRC F-box and WD repeat domain containing 11;beta-transducin repeat containing 1939 244 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1719.[MT7]-YIVSASGDR.2y8_1.heavy 556.297 / 804.421 12447.0 23.15049934387207 46 16 10 10 10 2.19248546532829 36.536185623208766 0.0 3 0.9678940253106905 6.869111813548709 12447.0 22.40128609073534 0.0 - - - - - - - 616.125 24 8 FBXW11;BTRC F-box and WD repeat domain containing 11;beta-transducin repeat containing 1941 244 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1719.[MT7]-YIVSASGDR.2y6_1.heavy 556.297 / 592.268 15300.0 23.15049934387207 46 16 10 10 10 2.19248546532829 36.536185623208766 0.0 3 0.9678940253106905 6.869111813548709 15300.0 22.812946066976846 0.0 - - - - - - - 259.0 30 5 FBXW11;BTRC F-box and WD repeat domain containing 11;beta-transducin repeat containing 1943 244 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1719.[MT7]-YIVSASGDR.2y7_1.heavy 556.297 / 691.337 17893.0 23.15049934387207 46 16 10 10 10 2.19248546532829 36.536185623208766 0.0 3 0.9678940253106905 6.869111813548709 17893.0 51.4958503350818 0.0 - - - - - - - 259.0 35 6 FBXW11;BTRC F-box and WD repeat domain containing 11;beta-transducin repeat containing 1945 245 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1850.[MT7]-IPLENLQIIR.2y8_1.heavy 676.923 / 998.599 3862.0 38.15439987182617 50 20 10 10 10 4.693198417470438 15.659695203517813 0.0 3 0.9964299177350073 20.648759581652364 3862.0 15.850750126858024 1.0 - - - - - - - 340.5 10 4 EGFR epidermal growth factor receptor 1947 245 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1850.[MT7]-IPLENLQIIR.2y9_1.heavy 676.923 / 1095.65 127206.0 38.15439987182617 50 20 10 10 10 4.693198417470438 15.659695203517813 0.0 3 0.9964299177350073 20.648759581652364 127206.0 206.206520851645 0.0 - - - - - - - 454.0 254 1 EGFR epidermal growth factor receptor 1949 245 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1850.[MT7]-IPLENLQIIR.2y6_1.heavy 676.923 / 756.473 12493.0 38.15439987182617 50 20 10 10 10 4.693198417470438 15.659695203517813 0.0 3 0.9964299177350073 20.648759581652364 12493.0 68.61060205580029 0.0 - - - - - - - 288.90909090909093 24 11 EGFR epidermal growth factor receptor 1951 245 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1850.[MT7]-IPLENLQIIR.2y7_1.heavy 676.923 / 885.515 8859.0 38.15439987182617 50 20 10 10 10 4.693198417470438 15.659695203517813 0.0 3 0.9964299177350073 20.648759581652364 8859.0 33.56273127753304 0.0 - - - - - - - 403.55555555555554 17 9 EGFR epidermal growth factor receptor 1953 246 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1718.[MT7]-TENC[CAM]VAK[MT7].2y4_1.heavy 555.297 / 621.351 7733.0 15.704899787902832 43 13 10 10 10 1.2870422780135375 51.27414488219056 0.0 3 0.9144675335648175 4.189398093264108 7733.0 68.43175342465753 0.0 - - - - - - - 275.77777777777777 15 9 BTRC beta-transducin repeat containing 1955 246 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1718.[MT7]-TENC[CAM]VAK[MT7].2y5_1.heavy 555.297 / 735.394 5982.0 15.704899787902832 43 13 10 10 10 1.2870422780135375 51.27414488219056 0.0 3 0.9144675335648175 4.189398093264108 5982.0 59.08249315068494 0.0 - - - - - - - 219.0 11 6 BTRC beta-transducin repeat containing 1957 246 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1718.[MT7]-TENC[CAM]VAK[MT7].2b4_1.heavy 555.297 / 649.273 6858.0 15.704899787902832 43 13 10 10 10 1.2870422780135375 51.27414488219056 0.0 3 0.9144675335648175 4.189398093264108 6858.0 46.97260273972603 0.0 - - - - - - - 292.0 13 9 BTRC beta-transducin repeat containing 1959 246 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1718.[MT7]-TENC[CAM]VAK[MT7].2y6_1.heavy 555.297 / 864.437 9922.0 15.704899787902832 43 13 10 10 10 1.2870422780135375 51.27414488219056 0.0 3 0.9144675335648175 4.189398093264108 9922.0 50.06305936073059 0.0 - - - - - - - 275.77777777777777 19 9 BTRC beta-transducin repeat containing 1961 247 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1717.[MT7]-ALMLELK[MT7].2y4_1.heavy 553.348 / 646.426 18546.0 34.81319999694824 45 20 10 5 10 7.295377540576384 13.707309792235828 0.043399810791015625 3 0.9935027935872373 15.302543237664787 18546.0 26.516576091777303 0.0 - - - - - - - 273.0 37 3 UBE2R2 ubiquitin-conjugating enzyme E2R 2 1963 247 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1717.[MT7]-ALMLELK[MT7].2y5_1.heavy 553.348 / 777.466 17728.0 34.81319999694824 45 20 10 5 10 7.295377540576384 13.707309792235828 0.043399810791015625 3 0.9935027935872373 15.302543237664787 17728.0 58.22590825688073 0.0 - - - - - - - 623.0 35 7 UBE2R2 ubiquitin-conjugating enzyme E2R 2 1965 247 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1717.[MT7]-ALMLELK[MT7].2y3_1.heavy 553.348 / 533.341 13909.0 34.81319999694824 45 20 10 5 10 7.295377540576384 13.707309792235828 0.043399810791015625 3 0.9935027935872373 15.302543237664787 13909.0 23.47442094165676 0.0 - - - - - - - 273.0 27 4 UBE2R2 ubiquitin-conjugating enzyme E2R 2 1967 247 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1717.[MT7]-ALMLELK[MT7].2y6_1.heavy 553.348 / 890.55 14455.0 34.81319999694824 45 20 10 5 10 7.295377540576384 13.707309792235828 0.043399810791015625 3 0.9935027935872373 15.302543237664787 14455.0 28.27383863080685 0.0 - - - - - - - 273.0 28 4 UBE2R2 ubiquitin-conjugating enzyme E2R 2 1969 248 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1669.[MT7]-DYALEK[MT7].2y4_1.heavy 513.789 / 604.379 42645.0 22.81839942932129 48 18 10 10 10 4.183438703977709 19.110543864429758 0.0 3 0.9847073489202199 9.967034513744894 42645.0 39.43394980184941 0.0 - - - - - - - 252.0 85 6 MCM7 minichromosome maintenance complex component 7 1971 248 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1669.[MT7]-DYALEK[MT7].2y5_1.heavy 513.789 / 767.442 57533.0 22.81839942932129 48 18 10 10 10 4.183438703977709 19.110543864429758 0.0 3 0.9847073489202199 9.967034513744894 57533.0 57.49114378298576 0.0 - - - - - - - 252.0 115 2 MCM7 minichromosome maintenance complex component 7 1973 248 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1669.[MT7]-DYALEK[MT7].2b4_1.heavy 513.789 / 607.321 23972.0 22.81839942932129 48 18 10 10 10 4.183438703977709 19.110543864429758 0.0 3 0.9847073489202199 9.967034513744894 23972.0 165.5209523809524 0.0 - - - - - - - 252.0 47 6 MCM7 minichromosome maintenance complex component 7 1975 248 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1669.[MT7]-DYALEK[MT7].2y3_1.heavy 513.789 / 533.341 45421.0 22.81839942932129 48 18 10 10 10 4.183438703977709 19.110543864429758 0.0 3 0.9847073489202199 9.967034513744894 45421.0 45.59529860760739 0.0 - - - - - - - 568.0 90 8 MCM7 minichromosome maintenance complex component 7 1977 249 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1668.[MT7]-VIPLAPK[MT7].2y4_1.heavy 513.352 / 572.389 6000.0 28.414100646972656 50 20 10 10 10 4.1822775237303365 23.91041709513483 0.0 3 0.9979579796310488 27.306020000101615 6000.0 5.830458306937684 1.0 - - - - - - - 333.0 12 5 ORC1 origin recognition complex, subunit 1 1979 249 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1668.[MT7]-VIPLAPK[MT7].2y5_1.heavy 513.352 / 669.442 113667.0 28.414100646972656 50 20 10 10 10 4.1822775237303365 23.91041709513483 0.0 3 0.9979579796310488 27.306020000101615 113667.0 110.67208132655509 0.0 - - - - - - - 333.0 227 2 ORC1 origin recognition complex, subunit 1 1981 249 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1668.[MT7]-VIPLAPK[MT7].2b4_1.heavy 513.352 / 567.399 6000.0 28.414100646972656 50 20 10 10 10 4.1822775237303365 23.91041709513483 0.0 3 0.9979579796310488 27.306020000101615 6000.0 1.9559942397695904 2.0 - - - - - - - 333.0 16 3 ORC1 origin recognition complex, subunit 1 1983 249 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1668.[MT7]-VIPLAPK[MT7].2y6_1.heavy 513.352 / 782.526 16333.0 28.414100646972656 50 20 10 10 10 4.1822775237303365 23.91041709513483 0.0 3 0.9979579796310488 27.306020000101615 16333.0 60.5655084829766 0.0 - - - - - - - 333.0 32 4 ORC1 origin recognition complex, subunit 1 1985 250 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1667.[MT7]-SDQEEK[MT7].2y4_1.heavy 512.263 / 677.359 N/A N/A - - - - - - - - - 0.0 - - - - - - - ORC1 origin recognition complex, subunit 1 1987 250 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1667.[MT7]-SDQEEK[MT7].2y5_1.heavy 512.263 / 792.386 N/A N/A - - - - - - - - - 0.0 - - - - - - - ORC1 origin recognition complex, subunit 1 1989 250 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1667.[MT7]-SDQEEK[MT7].2y3_1.heavy 512.263 / 549.3 N/A N/A - - - - - - - - - 0.0 - - - - - - - ORC1 origin recognition complex, subunit 1 1991 250 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1667.[MT7]-SDQEEK[MT7].2b5_1.heavy 512.263 / 733.312 N/A N/A - - - - - - - - - 0.0 - - - - - - - ORC1 origin recognition complex, subunit 1 1993 251 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1665.[MT7]-TREDTVR.2b3_1.heavy 510.781 / 531.301 1312.0 13.577224731445312 43 20 10 7 6 9.207640989524458 10.860545074875322 0.024700164794921875 6 0.996121086783552 19.809196300665086 1312.0 -0.8 6.0 - - - - - - - 176.75 2 24 ANAPC2;LOC650621 anaphase promoting complex subunit 2;anaphase-promoting complex subunit 2-like 1995 251 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1665.[MT7]-TREDTVR.2b5_1.heavy 510.781 / 747.375 2018.0 13.577224731445312 43 20 10 7 6 9.207640989524458 10.860545074875322 0.024700164794921875 6 0.996121086783552 19.809196300665086 2018.0 12.987128712871288 2.0 - - - - - - - 168.33333333333334 4 15 ANAPC2;LOC650621 anaphase promoting complex subunit 2;anaphase-promoting complex subunit 2-like 1997 251 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1665.[MT7]-TREDTVR.2b4_1.heavy 510.781 / 646.328 7567.0 13.577224731445312 43 20 10 7 6 9.207640989524458 10.860545074875322 0.024700164794921875 6 0.996121086783552 19.809196300665086 7567.0 14.184158415841582 1.0 - - - - - - - 196.05882352941177 15 17 ANAPC2;LOC650621 anaphase promoting complex subunit 2;anaphase-promoting complex subunit 2-like 1999 251 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1665.[MT7]-TREDTVR.2b6_1.heavy 510.781 / 846.444 2926.0 13.577224731445312 43 20 10 7 6 9.207640989524458 10.860545074875322 0.024700164794921875 6 0.996121086783552 19.809196300665086 2926.0 25.107590759075908 1.0 - - - - - - - 157.8125 7 16 ANAPC2;LOC650621 anaphase promoting complex subunit 2;anaphase-promoting complex subunit 2-like 2001 252 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1859.[MT7]-IIDFIYTAK[MT7].2y4_1.heavy 686.41 / 626.363 67520.0 39.06169891357422 46 16 10 10 10 3.0138477867042046 26.90591245759883 0.0 3 0.9609879707715838 6.227890939388278 67520.0 100.1777821174383 0.0 - - - - - - - 325.5 135 4 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 2003 252 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1859.[MT7]-IIDFIYTAK[MT7].2b4_1.heavy 686.41 / 633.373 31046.0 39.06169891357422 46 16 10 10 10 3.0138477867042046 26.90591245759883 0.0 3 0.9609879707715838 6.227890939388278 31046.0 114.32289309925154 1.0 - - - - - - - 303.8 93 5 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 2005 252 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1859.[MT7]-IIDFIYTAK[MT7].2y6_1.heavy 686.41 / 886.516 44507.0 39.06169891357422 46 16 10 10 10 3.0138477867042046 26.90591245759883 0.0 3 0.9609879707715838 6.227890939388278 44507.0 150.646965437788 0.0 - - - - - - - 361.6666666666667 89 6 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 2007 252 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1859.[MT7]-IIDFIYTAK[MT7].2y7_1.heavy 686.41 / 1001.54 33869.0 39.06169891357422 46 16 10 10 10 3.0138477867042046 26.90591245759883 0.0 3 0.9609879707715838 6.227890939388278 33869.0 224.67477188940092 0.0 - - - - - - - 289.3333333333333 67 9 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 2009 253 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 SUCC_ECO24.LVQQFTK.2y4.peptide 432.25 / 523.29 127131.0 21.314899444580078 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 127131.0 124.49230869427214 0.0 - - - - - - - 373.3333333333333 254 3 2011 253 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 SUCC_ECO24.LVQQFTK.2y6.peptide 432.25 / 750.41 272839.0 21.314899444580078 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 272839.0 326.6199724305666 0.0 - - - - - - - 336.0 545 2 2013 253 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 SUCC_ECO24.LVQQFTK.2y5.peptide 432.25 / 651.35 722959.0 21.314899444580078 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 722959.0 555.7440348152467 0.0 - - - - - - - 336.0 1445 2 2015 254 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1711.[MT7]-SLAPMDAPR.2y8_1.heavy 551.296 / 870.45 6109.0 24.289299488067627 36 10 10 6 10 7.115334153152602 14.054153725962797 0.03999900817871094 3 0.8255369215473136 2.910612025837448 6109.0 19.801965765765765 0.0 - - - - - - - 278.0 12 2 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 2017 254 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1711.[MT7]-SLAPMDAPR.2y6_1.heavy 551.296 / 686.329 16660.0 24.289299488067627 36 10 10 6 10 7.115334153152602 14.054153725962797 0.03999900817871094 3 0.8255369215473136 2.910612025837448 16660.0 42.012256144533374 0.0 - - - - - - - 624.5 33 8 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 2019 254 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1711.[MT7]-SLAPMDAPR.2y1_1.heavy 551.296 / 175.119 4720.0 24.289299488067627 36 10 10 6 10 7.115334153152602 14.054153725962797 0.03999900817871094 3 0.8255369215473136 2.910612025837448 4720.0 3.9784702353563905 13.0 - - - - - - - 278.0 12 1 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 2021 254 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1711.[MT7]-SLAPMDAPR.2y7_1.heavy 551.296 / 757.366 6664.0 24.289299488067627 36 10 10 6 10 7.115334153152602 14.054153725962797 0.03999900817871094 3 0.8255369215473136 2.910612025837448 6664.0 22.573549549549547 0.0 - - - - - - - 555.0 13 8 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 2023 255 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1858.[MT7]-LSLIQFFSK[MT7].2y4_1.heavy 685.918 / 672.384 12124.0 43.938201904296875 43 13 10 10 10 1.1650515118077935 59.108035918131485 0.0 3 0.9100965693059722 4.08475041837358 12124.0 52.64 0.0 - - - - - - - 317.5 24 10 RBL1 retinoblastoma-like 1 (p107) 2025 255 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1858.[MT7]-LSLIQFFSK[MT7].2y5_1.heavy 685.918 / 800.442 20640.0 43.938201904296875 43 13 10 10 10 1.1650515118077935 59.108035918131485 0.0 3 0.9100965693059722 4.08475041837358 20640.0 71.1076673085412 0.0 - - - - - - - 742.2857142857143 41 7 RBL1 retinoblastoma-like 1 (p107) 2027 255 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1858.[MT7]-LSLIQFFSK[MT7].2y3_1.heavy 685.918 / 525.315 12268.0 43.938201904296875 43 13 10 10 10 1.1650515118077935 59.108035918131485 0.0 3 0.9100965693059722 4.08475041837358 12268.0 42.264964270406175 0.0 - - - - - - - 276.5833333333333 24 12 RBL1 retinoblastoma-like 1 (p107) 2029 255 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1858.[MT7]-LSLIQFFSK[MT7].2y6_1.heavy 685.918 / 913.526 10825.0 43.938201904296875 43 13 10 10 10 1.1650515118077935 59.108035918131485 0.0 3 0.9100965693059722 4.08475041837358 10825.0 97.57222222222222 0.0 - - - - - - - 288.6923076923077 21 13 RBL1 retinoblastoma-like 1 (p107) 2031 256 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1710.[MT7]-GLLVPALK[MT7].2y4_1.heavy 549.878 / 572.389 107976.0 33.83689880371094 46 16 10 10 10 2.7543637098971896 36.30602583118285 0.0 3 0.9695534216762808 7.054805135007521 107976.0 412.8165990294368 0.0 - - - - - - - 293.0 215 1 SOS1 son of sevenless homolog 1 (Drosophila) 2033 256 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1710.[MT7]-GLLVPALK[MT7].2y5_1.heavy 549.878 / 671.457 12583.0 33.83689880371094 46 16 10 10 10 2.7543637098971896 36.30602583118285 0.0 3 0.9695534216762808 7.054805135007521 12583.0 13.557079997663022 0.0 - - - - - - - 293.0 25 3 SOS1 son of sevenless homolog 1 (Drosophila) 2035 256 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1710.[MT7]-GLLVPALK[MT7].2b4_1.heavy 549.878 / 527.367 64083.0 33.83689880371094 46 16 10 10 10 2.7543637098971896 36.30602583118285 0.0 3 0.9695534216762808 7.054805135007521 64083.0 119.91155364756732 0.0 - - - - - - - 293.0 128 2 SOS1 son of sevenless homolog 1 (Drosophila) 2037 256 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1710.[MT7]-GLLVPALK[MT7].2y6_1.heavy 549.878 / 784.541 6730.0 33.83689880371094 46 16 10 10 10 2.7543637098971896 36.30602583118285 0.0 3 0.9695534216762808 7.054805135007521 6730.0 23.70555635131888 0.0 - - - - - - - 293.0 13 3 SOS1 son of sevenless homolog 1 (Drosophila) 2039 257 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1662.[MT7]-VLQLMLR.2y4_1.heavy 508.824 / 532.328 4707.0 37.71349906921387 45 20 10 5 10 10.856094848297912 9.211415467291964 0.040599822998046875 3 0.997107989346901 22.94339619082036 4707.0 38.457191489361705 0.0 - - - - - - - 392.3333333333333 9 3 MCM5 minichromosome maintenance complex component 5 2041 257 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1662.[MT7]-VLQLMLR.2y5_1.heavy 508.824 / 660.386 10592.0 37.71349906921387 45 20 10 5 10 10.856094848297912 9.211415467291964 0.040599822998046875 3 0.997107989346901 22.94339619082036 10592.0 82.9331063829787 0.0 - - - - - - - 268.7142857142857 21 7 MCM5 minichromosome maintenance complex component 5 2043 257 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1662.[MT7]-VLQLMLR.2b4_1.heavy 508.824 / 598.404 8473.0 37.71349906921387 45 20 10 5 10 10.856094848297912 9.211415467291964 0.040599822998046875 3 0.997107989346901 22.94339619082036 8473.0 28.60312101910828 0.0 - - - - - - - 392.3333333333333 16 6 MCM5 minichromosome maintenance complex component 5 2045 257 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1662.[MT7]-VLQLMLR.2y6_1.heavy 508.824 / 773.47 29186.0 37.71349906921387 45 20 10 5 10 10.856094848297912 9.211415467291964 0.040599822998046875 3 0.997107989346901 22.94339619082036 29186.0 84.38544460282804 0.0 - - - - - - - 274.3333333333333 58 6 MCM5 minichromosome maintenance complex component 5 2047 258 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1661.[MT7]-AVYTSGK[MT7].2y4_1.heavy 507.297 / 536.316 22125.0 17.9685001373291 50 20 10 10 10 23.551372833323505 4.246036980846704 0.0 3 0.9995516587151758 58.282983664930406 22125.0 95.92967610597958 0.0 - - - - - - - 272.0 44 2 MCM6 minichromosome maintenance complex component 6 2049 258 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1661.[MT7]-AVYTSGK[MT7].2y5_1.heavy 507.297 / 699.379 23576.0 17.9685001373291 50 20 10 10 10 23.551372833323505 4.246036980846704 0.0 3 0.9995516587151758 58.282983664930406 23576.0 92.59386096703713 0.0 - - - - - - - 253.8 47 5 MCM6 minichromosome maintenance complex component 6 2051 258 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1661.[MT7]-AVYTSGK[MT7].2y6_1.heavy 507.297 / 798.448 16685.0 17.9685001373291 50 20 10 10 10 23.551372833323505 4.246036980846704 0.0 3 0.9995516587151758 58.282983664930406 16685.0 64.67600520580133 0.0 - - - - - - - 259.0 33 7 MCM6 minichromosome maintenance complex component 6 2053 258 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1661.[MT7]-AVYTSGK[MT7].2y1_1.heavy 507.297 / 291.215 N/A 17.9685001373291 50 20 10 10 10 23.551372833323505 4.246036980846704 0.0 3 0.9995516587151758 58.282983664930406 5622.0 1.7020115311400827 18.0 - - - - - - - 634.5 23 2 MCM6 minichromosome maintenance complex component 6 2055 259 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2119.[MT7]-TVESR.2b3_1.heavy 368.21 / 474.268 53999.0 13.380499839782715 38 13 10 7 8 2.199905880547031 34.647480946092195 0.023599624633789062 4 0.9245796239360546 4.465292599548918 53999.0 192.82882567300538 0.0 - - - - - - - 253.33333333333334 107 18 HRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog 2057 259 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2119.[MT7]-TVESR.2y4_1.heavy 368.21 / 490.262 32027.0 13.380499839782715 38 13 10 7 8 2.199905880547031 34.647480946092195 0.023599624633789062 4 0.9245796239360546 4.465292599548918 32027.0 104.03617573844535 0.0 - - - - - - - 745.0 64 7 HRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog 2059 259 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2119.[MT7]-TVESR.2b4_1.heavy 368.21 / 561.3 7355.0 13.380499839782715 38 13 10 7 8 2.199905880547031 34.647480946092195 0.023599624633789062 4 0.9245796239360546 4.465292599548918 7355.0 28.443813743135358 1.0 - - - - - - - 287.0 18 24 HRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog 2061 259 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2119.[MT7]-TVESR.2y3_1.heavy 368.21 / 391.194 6703.0 13.380499839782715 38 13 10 7 8 2.199905880547031 34.647480946092195 0.023599624633789062 4 0.9245796239360546 4.465292599548918 6703.0 28.83010752688172 2.0 - - - - - - - 232.53846153846155 41 26 HRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog 2063 260 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1856.[MT7]-AIQMVANSLK[MT7].2y8_1.heavy 681.904 / 1034.58 5481.0 31.88309955596924 33 20 0 5 8 19.691232839701605 5.078402191171051 0.048801422119140625 4 0.9974697354302019 24.529448656903593 5481.0 5.951374527139197 1.0 - - - - - - - 322.0 10 4 AKT2 v-akt murine thymoma viral oncogene homolog 2 2065 260 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1856.[MT7]-AIQMVANSLK[MT7].2y5_1.heavy 681.904 / 676.411 10640.0 31.88309955596924 33 20 0 5 8 19.691232839701605 5.078402191171051 0.048801422119140625 4 0.9974697354302019 24.529448656903593 10640.0 9.789132924256705 1.0 - - - - - - - 322.0 208 4 AKT2 v-akt murine thymoma viral oncogene homolog 2 2067 260 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1856.[MT7]-AIQMVANSLK[MT7].2b4_1.heavy 681.904 / 588.33 13542.0 31.88309955596924 33 20 0 5 8 19.691232839701605 5.078402191171051 0.048801422119140625 4 0.9974697354302019 24.529448656903593 13542.0 22.61179529111854 0.0 - - - - - - - 322.0 27 3 AKT2 v-akt murine thymoma viral oncogene homolog 2 2069 260 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1856.[MT7]-AIQMVANSLK[MT7].2y6_1.heavy 681.904 / 775.479 9351.0 31.88309955596924 33 20 0 5 8 19.691232839701605 5.078402191171051 0.048801422119140625 4 0.9974697354302019 24.529448656903593 9351.0 41.50657171746353 0.0 - - - - - - - 322.0 18 4 AKT2 v-akt murine thymoma viral oncogene homolog 2 2071 261 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1660.[MT7]-TYEVSLR.2b3_1.heavy 506.283 / 538.263 18076.0 25.594249725341797 45 20 10 5 10 10.692944256731542 9.351961218449903 0.043701171875 3 0.998254821995188 29.537880153668517 18076.0 21.960831582363895 0.0 - - - - - - - 296.0 36 3 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 2073 261 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1660.[MT7]-TYEVSLR.2y5_1.heavy 506.283 / 603.346 10668.0 25.594249725341797 45 20 10 5 10 10.692944256731542 9.351961218449903 0.043701171875 3 0.998254821995188 29.537880153668517 10668.0 38.916001750738594 0.0 - - - - - - - 296.0 21 5 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 2075 261 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1660.[MT7]-TYEVSLR.2b4_1.heavy 506.283 / 637.331 9186.0 25.594249725341797 45 20 10 5 10 10.692944256731542 9.351961218449903 0.043701171875 3 0.998254821995188 29.537880153668517 9186.0 12.999527262313071 0.0 - - - - - - - 296.0 18 1 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 2077 261 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1660.[MT7]-TYEVSLR.2y6_1.heavy 506.283 / 766.409 27263.0 25.594249725341797 45 20 10 5 10 10.692944256731542 9.351961218449903 0.043701171875 3 0.998254821995188 29.537880153668517 27263.0 29.531258398120336 0.0 - - - - - - - 296.0 54 4 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 2079 262 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1855.[MT7]-FLC[CAM]IFLEK[MT7].2b3_1.heavy 679.393 / 565.292 17138.0 42.712799072265625 45 15 10 10 10 1.5045932212023134 46.64029056700639 0.0 3 0.9508194961908809 5.542040712567421 17138.0 28.486423389516176 0.0 - - - - - - - 212.25 34 8 PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 2081 262 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1855.[MT7]-FLC[CAM]IFLEK[MT7].2y5_1.heavy 679.393 / 793.494 6957.0 42.712799072265625 45 15 10 10 10 1.5045932212023134 46.64029056700639 0.0 3 0.9508194961908809 5.542040712567421 6957.0 20.14956651536034 1.0 - - - - - - - 212.25 16 8 PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 2083 262 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1855.[MT7]-FLC[CAM]IFLEK[MT7].2y3_1.heavy 679.393 / 533.341 10351.0 42.712799072265625 45 15 10 10 10 1.5045932212023134 46.64029056700639 0.0 3 0.9508194961908809 5.542040712567421 10351.0 30.30488633836231 0.0 - - - - - - - 699.75 20 8 PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 2085 262 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1855.[MT7]-FLC[CAM]IFLEK[MT7].2y6_1.heavy 679.393 / 953.525 15102.0 42.712799072265625 45 15 10 10 10 1.5045932212023134 46.64029056700639 0.0 3 0.9508194961908809 5.542040712567421 15102.0 130.36251847995834 0.0 - - - - - - - 194.14285714285714 30 7 PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 2087 263 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2486.[MT7]-LAALPNVYEVISK[MT7].3b4_1.heavy 569.009 / 513.352 48667.0 39.34370040893555 46 16 10 10 10 3.3902540991111927 29.49631416306422 0.0 3 0.9611375129899524 6.239940735129816 48667.0 143.40372353455817 0.0 - - - - - - - 370.25 97 4 MCM5 minichromosome maintenance complex component 5 2089 263 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2486.[MT7]-LAALPNVYEVISK[MT7].3y4_1.heavy 569.009 / 590.399 22641.0 39.34370040893555 46 16 10 10 10 3.3902540991111927 29.49631416306422 0.0 3 0.9611375129899524 6.239940735129816 22641.0 69.03311325180097 0.0 - - - - - - - 272.2857142857143 45 7 MCM5 minichromosome maintenance complex component 5 2091 263 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2486.[MT7]-LAALPNVYEVISK[MT7].3b7_1.heavy 569.009 / 823.516 17351.0 39.34370040893555 46 16 10 10 10 3.3902540991111927 29.49631416306422 0.0 3 0.9611375129899524 6.239940735129816 17351.0 56.10673861650735 0.0 - - - - - - - 212.0 34 6 MCM5 minichromosome maintenance complex component 5 2093 263 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2486.[MT7]-LAALPNVYEVISK[MT7].3y5_1.heavy 569.009 / 719.442 18620.0 39.34370040893555 46 16 10 10 10 3.3902540991111927 29.49631416306422 0.0 3 0.9611375129899524 6.239940735129816 18620.0 35.030816429589706 0.0 - - - - - - - 291.125 37 8 MCM5 minichromosome maintenance complex component 5 2095 264 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2485.[MT7]-ALLLLLVGGVDQSPR.3b4_1.heavy 565.681 / 555.399 168110.0 47.69390106201172 50 20 10 10 10 5.885660863290938 16.99044547804365 0.0 3 0.9919790933615391 13.770823912918166 168110.0 449.10963592413935 0.0 - - - - - - - 202.71428571428572 336 7 MCM7 minichromosome maintenance complex component 7 2097 264 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2485.[MT7]-ALLLLLVGGVDQSPR.3b5_1.heavy 565.681 / 668.483 150181.0 47.69390106201172 50 20 10 10 10 5.885660863290938 16.99044547804365 0.0 3 0.9919790933615391 13.770823912918166 150181.0 526.6339444232965 0.0 - - - - - - - 243.33333333333334 300 9 MCM7 minichromosome maintenance complex component 7 2099 264 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2485.[MT7]-ALLLLLVGGVDQSPR.3y8_1.heavy 565.681 / 815.401 164264.0 47.69390106201172 50 20 10 10 10 5.885660863290938 16.99044547804365 0.0 3 0.9919790933615391 13.770823912918166 164264.0 1369.1018854955869 0.0 - - - - - - - 98.5 328 6 MCM7 minichromosome maintenance complex component 7 2101 264 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2485.[MT7]-ALLLLLVGGVDQSPR.3y5_1.heavy 565.681 / 602.289 61066.0 47.69390106201172 50 20 10 10 10 5.885660863290938 16.99044547804365 0.0 3 0.9919790933615391 13.770823912918166 61066.0 227.82890691977957 0.0 - - - - - - - 216.83333333333334 122 12 MCM7 minichromosome maintenance complex component 7 2103 265 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1921.[MT7]-FQMFQLIDIAR.2y8_1.heavy 763.419 / 975.562 9276.0 44.38610076904297 48 18 10 10 10 4.047809744183618 19.74712870513521 0.0 3 0.9863179775227645 10.538791301232827 9276.0 36.13042006380716 0.0 - - - - - - - 214.8 18 5 RAF1 v-raf-1 murine leukemia viral oncogene homolog 1 2105 265 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1921.[MT7]-FQMFQLIDIAR.2y9_1.heavy 763.419 / 1106.6 5243.0 44.38610076904297 48 18 10 10 10 4.047809744183618 19.74712870513521 0.0 3 0.9863179775227645 10.538791301232827 5243.0 50.80674416023969 0.0 - - - - - - - 201.33333333333334 10 6 RAF1 v-raf-1 murine leukemia viral oncogene homolog 1 2107 265 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1921.[MT7]-FQMFQLIDIAR.2y10_1.heavy 763.419 / 1234.66 6588.0 44.38610076904297 48 18 10 10 10 4.047809744183618 19.74712870513521 0.0 3 0.9863179775227645 10.538791301232827 6588.0 56.51139100038839 0.0 - - - - - - - 188.0 13 10 RAF1 v-raf-1 murine leukemia viral oncogene homolog 1 2109 265 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1921.[MT7]-FQMFQLIDIAR.2y7_1.heavy 763.419 / 828.494 6991.0 44.38610076904297 48 18 10 10 10 4.047809744183618 19.74712870513521 0.0 3 0.9863179775227645 10.538791301232827 6991.0 78.25746268656717 0.0 - - - - - - - 184.625 13 8 RAF1 v-raf-1 murine leukemia viral oncogene homolog 1 2111 266 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1922.[MT7]-IIDEDGLLNLIR.2y8_1.heavy 764.447 / 913.547 2284.0 43.36589813232422 47 17 10 10 10 2.555780637707069 27.82015474375866 0.0 3 0.9763836855913064 8.01489580783896 2284.0 15.92552527837333 0.0 - - - - - - - 197.9 4 10 RFC1 replication factor C (activator 1) 1, 145kDa 2113 266 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1922.[MT7]-IIDEDGLLNLIR.2y9_1.heavy 764.447 / 1042.59 3198.0 43.36589813232422 47 17 10 10 10 2.555780637707069 27.82015474375866 0.0 3 0.9763836855913064 8.01489580783896 3198.0 12.870729401719826 1.0 - - - - - - - 202.88888888888889 6 9 RFC1 replication factor C (activator 1) 1, 145kDa 2115 266 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1922.[MT7]-IIDEDGLLNLIR.2y10_1.heavy 764.447 / 1157.62 2589.0 43.36589813232422 47 17 10 10 10 2.555780637707069 27.82015474375866 0.0 3 0.9763836855913064 8.01489580783896 2589.0 24.840103537532354 0.0 - - - - - - - 228.25 5 4 RFC1 replication factor C (activator 1) 1, 145kDa 2117 266 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1922.[MT7]-IIDEDGLLNLIR.2y7_1.heavy 764.447 / 798.52 2741.0 43.36589813232422 47 17 10 10 10 2.555780637707069 27.82015474375866 0.0 3 0.9763836855913064 8.01489580783896 2741.0 10.656095051060486 1.0 - - - - - - - 274.06666666666666 6 15 RFC1 replication factor C (activator 1) 1, 145kDa 2119 267 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1923.[MT7]-TALALEVGELVK[MT7].2y8_1.heavy 765.971 / 1030.63 8930.0 38.52730178833008 47 17 10 10 10 2.8491368934409893 35.09834863681364 0.0 3 0.9785807579599635 8.41747955402107 8930.0 25.577119402985076 0.0 - - - - - - - 318.57142857142856 17 7 CRK v-crk sarcoma virus CT10 oncogene homolog (avian) 2121 267 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1923.[MT7]-TALALEVGELVK[MT7].2y5_1.heavy 765.971 / 689.431 18529.0 38.52730178833008 47 17 10 10 10 2.8491368934409893 35.09834863681364 0.0 3 0.9785807579599635 8.41747955402107 18529.0 45.50012097407698 0.0 - - - - - - - 781.5 37 8 CRK v-crk sarcoma virus CT10 oncogene homolog (avian) 2123 267 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1923.[MT7]-TALALEVGELVK[MT7].2y9_1.heavy 765.971 / 1101.66 7367.0 38.52730178833008 47 17 10 10 10 2.8491368934409893 35.09834863681364 0.0 3 0.9785807579599635 8.41747955402107 7367.0 41.16960257010909 0.0 - - - - - - - 260.1666666666667 14 6 CRK v-crk sarcoma virus CT10 oncogene homolog (avian) 2125 267 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1923.[MT7]-TALALEVGELVK[MT7].2b4_1.heavy 765.971 / 501.315 25449.0 38.52730178833008 47 17 10 10 10 2.8491368934409893 35.09834863681364 0.0 3 0.9785807579599635 8.41747955402107 25449.0 122.4785913455259 0.0 - - - - - - - 278.75 50 8 CRK v-crk sarcoma virus CT10 oncogene homolog (avian) 2127 268 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1924.[MT7]-FISADVHGIWSR.3y5_1.heavy 511.276 / 618.336 19732.0 33.75647449493408 42 17 10 5 10 3.3828781469847438 24.210358481907342 0.045902252197265625 3 0.9731212676045518 7.510699300111865 19732.0 42.96164548494983 0.0 - - - - - - - 299.0 39 5 UBA6 ubiquitin-like modifier activating enzyme 6 2129 268 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1924.[MT7]-FISADVHGIWSR.3b4_1.heavy 511.276 / 563.331 1196.0 33.75647449493408 42 17 10 5 10 3.3828781469847438 24.210358481907342 0.045902252197265625 3 0.9731212676045518 7.510699300111865 1196.0 7.888 10.0 - - - - - - - 299.0 2 7 UBA6 ubiquitin-like modifier activating enzyme 6 2131 268 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1924.[MT7]-FISADVHGIWSR.3b5_1.heavy 511.276 / 678.358 22722.0 33.75647449493408 42 17 10 5 10 3.3828781469847438 24.210358481907342 0.045902252197265625 3 0.9731212676045518 7.510699300111865 22722.0 71.43371237458194 0.0 - - - - - - - 299.0 45 2 UBA6 ubiquitin-like modifier activating enzyme 6 2133 268 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1924.[MT7]-FISADVHGIWSR.3y4_1.heavy 511.276 / 561.314 1495.0 33.75647449493408 42 17 10 5 10 3.3828781469847438 24.210358481907342 0.045902252197265625 3 0.9731212676045518 7.510699300111865 1495.0 3.5 2.0 - - - - - - - 299.0 2 4 UBA6 ubiquitin-like modifier activating enzyme 6 2135 269 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2386.[MT7]-C[CAM]DISAEIQQR.2y8_1.heavy 682.341 / 944.516 5276.0 23.976299285888672 43 13 10 10 10 1.3285339667148597 44.080740531223526 0.0 3 0.9188311959370598 4.302149324120282 5276.0 4.894258033873233 1.0 - - - - - - - 278.0 12 7 PML promyelocytic leukemia 2137 269 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2386.[MT7]-C[CAM]DISAEIQQR.2y9_1.heavy 682.341 / 1059.54 6109.0 23.976299285888672 43 13 10 10 10 1.3285339667148597 44.080740531223526 0.0 3 0.9188311959370598 4.302149324120282 6109.0 31.662746257048415 0.0 - - - - - - - 278.0 12 4 PML promyelocytic leukemia 2139 269 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2386.[MT7]-C[CAM]DISAEIQQR.2b6_1.heavy 682.341 / 820.363 4165.0 23.976299285888672 43 13 10 10 10 1.3285339667148597 44.080740531223526 0.0 3 0.9188311959370598 4.302149324120282 4165.0 6.704144144144144 2.0 - - - - - - - 278.0 8 6 PML promyelocytic leukemia 2141 269 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2386.[MT7]-C[CAM]DISAEIQQR.2y7_1.heavy 682.341 / 831.432 11384.0 23.976299285888672 43 13 10 10 10 1.3285339667148597 44.080740531223526 0.0 3 0.9188311959370598 4.302149324120282 11384.0 58.59266368526799 0.0 - - - - - - - 278.0 22 4 PML promyelocytic leukemia 2143 270 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1926.[MT7]-YVEQLLTLFNR.2b3_1.heavy 770.436 / 536.284 5634.0 47.22865104675293 40 14 10 6 10 2.504050350820754 27.06930285525381 0.038700103759765625 3 0.9452327494552418 5.249278321382387 5634.0 56.06484246848042 0.0 - - - - - - - 153.52941176470588 11 17 CUL5 cullin 5 2145 270 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1926.[MT7]-YVEQLLTLFNR.2b4_1.heavy 770.436 / 664.342 4947.0 47.22865104675293 40 14 10 6 10 2.504050350820754 27.06930285525381 0.038700103759765625 3 0.9452327494552418 5.249278321382387 4947.0 29.752926732896817 0.0 - - - - - - - 193.1875 9 16 CUL5 cullin 5 2147 270 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1926.[MT7]-YVEQLLTLFNR.2y9_1.heavy 770.436 / 1133.63 3917.0 47.22865104675293 40 14 10 6 10 2.504050350820754 27.06930285525381 0.038700103759765625 3 0.9452327494552418 5.249278321382387 3917.0 33.2604504313205 0.0 - - - - - - - 176.71428571428572 7 14 CUL5 cullin 5 2149 270 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1926.[MT7]-YVEQLLTLFNR.2y10_1.heavy 770.436 / 1232.7 3779.0 47.22865104675293 40 14 10 6 10 2.504050350820754 27.06930285525381 0.038700103759765625 3 0.9452327494552418 5.249278321382387 3779.0 71.27831011678626 0.0 - - - - - - - 180.25 7 8 CUL5 cullin 5 2151 271 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1927.[MT7]-QGVEDAFYTLVR.2b6_1.heavy 771.408 / 744.364 2482.0 38.402198791503906 42 12 10 10 10 1.764316601969416 44.96181229874769 0.0 3 0.8925931068519044 3.7314722416704007 2482.0 3.116248153618907 2.0 - - - - - - - 406.0 9 5 HRAS;NRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog;neuroblastoma RAS viral (v-ras) oncogene homolog 2153 271 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1927.[MT7]-QGVEDAFYTLVR.2b7_1.heavy 771.408 / 891.433 4513.0 38.402198791503906 42 12 10 10 10 1.764316601969416 44.96181229874769 0.0 3 0.8925931068519044 3.7314722416704007 4513.0 23.98054274669859 0.0 - - - - - - - 347.15384615384613 9 13 HRAS;NRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog;neuroblastoma RAS viral (v-ras) oncogene homolog 2155 271 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1927.[MT7]-QGVEDAFYTLVR.2b5_1.heavy 771.408 / 673.327 10605.0 38.402198791503906 42 12 10 10 10 1.764316601969416 44.96181229874769 0.0 3 0.8925931068519044 3.7314722416704007 10605.0 24.188903249630723 0.0 - - - - - - - 282.25 21 12 HRAS;NRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog;neuroblastoma RAS viral (v-ras) oncogene homolog 2157 271 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1927.[MT7]-QGVEDAFYTLVR.2y7_1.heavy 771.408 / 869.488 5867.0 38.402198791503906 42 12 10 10 10 1.764316601969416 44.96181229874769 0.0 3 0.8925931068519044 3.7314722416704007 5867.0 27.349832551208483 0.0 - - - - - - - 413.5 11 6 HRAS;NRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog;neuroblastoma RAS viral (v-ras) oncogene homolog 2159 272 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1928.[MT7]-VLGLLGALDPYK[MT7].2y3_1.heavy 773.976 / 551.331 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2161 272 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1928.[MT7]-VLGLLGALDPYK[MT7].2y10_1.heavy 773.976 / 1190.69 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2163 272 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1928.[MT7]-VLGLLGALDPYK[MT7].2b10_2.heavy 773.976 / 547.341 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2165 272 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1928.[MT7]-VLGLLGALDPYK[MT7].2y1_1.heavy 773.976 / 291.215 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2167 273 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1724.[MT7]-NLVLAGIK[MT7].2y4_1.heavy 558.373 / 532.357 75209.0 31.677000045776367 50 20 10 10 10 8.444360960433338 11.842222338499884 0.0 3 0.9934212114036881 15.207261789910332 75209.0 106.2506699558352 0.0 - - - - - - - 930.4285714285714 150 7 UBA6 ubiquitin-like modifier activating enzyme 6 2169 273 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1724.[MT7]-NLVLAGIK[MT7].2y5_1.heavy 558.373 / 645.442 70325.0 31.677000045776367 50 20 10 10 10 8.444360960433338 11.842222338499884 0.0 3 0.9934212114036881 15.207261789910332 70325.0 59.85439380475299 0.0 - - - - - - - 326.0 140 1 UBA6 ubiquitin-like modifier activating enzyme 6 2171 273 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1724.[MT7]-NLVLAGIK[MT7].2b4_1.heavy 558.373 / 584.389 31581.0 31.677000045776367 50 20 10 10 10 8.444360960433338 11.842222338499884 0.0 3 0.9934212114036881 15.207261789910332 31581.0 124.6772371916032 0.0 - - - - - - - 326.0 63 3 UBA6 ubiquitin-like modifier activating enzyme 6 2173 273 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1724.[MT7]-NLVLAGIK[MT7].2y6_1.heavy 558.373 / 744.51 34511.0 31.677000045776367 50 20 10 10 10 8.444360960433338 11.842222338499884 0.0 3 0.9934212114036881 15.207261789910332 34511.0 74.55795882879185 0.0 - - - - - - - 744.1428571428571 69 7 UBA6 ubiquitin-like modifier activating enzyme 6 2175 274 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2207.[MT7]-QC[CAM]LEK[MT7].2b3_1.heavy 483.27 / 546.283 3672.0 17.502199172973633 48 18 10 10 10 7.032103936769499 14.220495160362965 0.0 3 0.9844179738401375 9.873812023665899 3672.0 7.484812079936651 0.0 - - - - - - - 218.75 7 4 TRIM32;YSK4 tripartite motif-containing 32;YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae) 2177 274 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2207.[MT7]-QC[CAM]LEK[MT7].2y4_1.heavy 483.27 / 693.372 46338.0 17.502199172973633 48 18 10 10 10 7.032103936769499 14.220495160362965 0.0 3 0.9844179738401375 9.873812023665899 46338.0 140.5581146125322 0.0 - - - - - - - 280.0 92 5 TRIM32;YSK4 tripartite motif-containing 32;YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae) 2179 274 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2207.[MT7]-QC[CAM]LEK[MT7].2b4_1.heavy 483.27 / 675.325 11716.0 17.502199172973633 48 18 10 10 10 7.032103936769499 14.220495160362965 0.0 3 0.9844179738401375 9.873812023665899 11716.0 77.01288600040874 0.0 - - - - - - - 218.75 23 4 TRIM32;YSK4 tripartite motif-containing 32;YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae) 2181 274 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2207.[MT7]-QC[CAM]LEK[MT7].2y3_1.heavy 483.27 / 533.341 15038.0 17.502199172973633 48 18 10 10 10 7.032103936769499 14.220495160362965 0.0 3 0.9844179738401375 9.873812023665899 15038.0 54.136799999999994 0.0 - - - - - - - 233.33333333333334 30 9 TRIM32;YSK4 tripartite motif-containing 32;YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae) 2183 275 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1863.[MT7]-IISIFSGTEK[MT7].2y4_1.heavy 691.91 / 578.327 10756.0 36.532501220703125 48 18 10 10 10 11.125447805944246 8.988402241801964 0.0 3 0.984661388701271 9.95205249663016 10756.0 13.599051011993414 1.0 - - - - - - - 250.0 25 4 PAK2 p21 protein (Cdc42/Rac)-activated kinase 2 2185 275 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1863.[MT7]-IISIFSGTEK[MT7].2y8_1.heavy 691.91 / 1012.54 24013.0 36.532501220703125 48 18 10 10 10 11.125447805944246 8.988402241801964 0.0 3 0.984661388701271 9.95205249663016 24013.0 77.48194666666666 0.0 - - - - - - - 250.0 48 5 PAK2 p21 protein (Cdc42/Rac)-activated kinase 2 2187 275 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1863.[MT7]-IISIFSGTEK[MT7].2y5_1.heavy 691.91 / 665.359 25764.0 36.532501220703125 48 18 10 10 10 11.125447805944246 8.988402241801964 0.0 3 0.984661388701271 9.95205249663016 25764.0 49.4558946835443 0.0 - - - - - - - 625.0 51 8 PAK2 p21 protein (Cdc42/Rac)-activated kinase 2 2189 275 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1863.[MT7]-IISIFSGTEK[MT7].2y6_1.heavy 691.91 / 812.427 28516.0 36.532501220703125 48 18 10 10 10 11.125447805944246 8.988402241801964 0.0 3 0.984661388701271 9.95205249663016 28516.0 38.73160987554902 0.0 - - - - - - - 250.0 57 2 PAK2 p21 protein (Cdc42/Rac)-activated kinase 2 2191 276 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1929.[MT7]-VSELQVLLGYAGR.2y8_1.heavy 774.947 / 848.499 19835.0 42.519798278808594 48 18 10 10 10 2.4173320886748764 28.82579506948026 0.0 3 0.9815409376659522 9.069580992289598 19835.0 56.855591662931424 0.0 - - - - - - - 229.66666666666666 39 9 PIAS1 protein inhibitor of activated STAT, 1 2193 276 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1929.[MT7]-VSELQVLLGYAGR.2y9_1.heavy 774.947 / 976.557 24665.0 42.519798278808594 48 18 10 10 10 2.4173320886748764 28.82579506948026 0.0 3 0.9815409376659522 9.069580992289598 24665.0 108.71185350264906 0.0 - - - - - - - 241.2 49 5 PIAS1 protein inhibitor of activated STAT, 1 2195 276 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1929.[MT7]-VSELQVLLGYAGR.2b5_1.heavy 774.947 / 701.395 22078.0 42.519798278808594 48 18 10 10 10 2.4173320886748764 28.82579506948026 0.0 3 0.9815409376659522 9.069580992289598 22078.0 33.59695652173913 0.0 - - - - - - - 536.2222222222222 44 9 PIAS1 protein inhibitor of activated STAT, 1 2197 276 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1929.[MT7]-VSELQVLLGYAGR.2y7_1.heavy 774.947 / 749.43 25355.0 42.519798278808594 48 18 10 10 10 2.4173320886748764 28.82579506948026 0.0 3 0.9815409376659522 9.069580992289598 25355.0 74.7159744064138 0.0 - - - - - - - 732.75 50 8 PIAS1 protein inhibitor of activated STAT, 1 2199 277 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1723.[MT7]-NAIQEIQR.2y5_1.heavy 558.318 / 673.363 6314.0 22.829074382781982 29 18 0 5 6 2.715985713214453 29.22068910918572 0.04269981384277344 5 0.9839957775917144 9.742359730721404 6314.0 27.961188118811883 1.0 - - - - - - - 253.0 32 7 CUL3 cullin 3 2201 277 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1723.[MT7]-NAIQEIQR.2y6_1.heavy 558.318 / 786.447 4546.0 22.829074382781982 29 18 0 5 6 2.715985713214453 29.22068910918572 0.04269981384277344 5 0.9839957775917144 9.742359730721404 4546.0 8.15698143006662 1.0 - - - - - - - 253.0 30 12 CUL3 cullin 3 2203 277 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1723.[MT7]-NAIQEIQR.2b5_1.heavy 558.318 / 700.375 6819.0 22.829074382781982 29 18 0 5 6 2.715985713214453 29.22068910918572 0.04269981384277344 5 0.9839957775917144 9.742359730721404 6819.0 15.833034300791557 1.0 - - - - - - - 645.5555555555555 81 9 CUL3 cullin 3 2205 277 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1723.[MT7]-NAIQEIQR.2y7_1.heavy 558.318 / 857.484 9597.0 22.829074382781982 29 18 0 5 6 2.715985713214453 29.22068910918572 0.04269981384277344 5 0.9839957775917144 9.742359730721404 9597.0 22.03005277044855 0.0 - - - - - - - 694.75 19 8 CUL3 cullin 3 2207 278 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1862.[MT7]-ATIISEQQAK[MT7].3b4_1.heavy 459.604 / 543.362 27194.0 22.309799194335938 37 17 2 10 8 3.232247284769827 23.95049838823344 0.0 4 0.9721671681956802 7.3802519580882535 27194.0 65.85757823129252 0.0 - - - - - - - 381.1111111111111 54 9 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 2209 278 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1862.[MT7]-ATIISEQQAK[MT7].3b5_1.heavy 459.604 / 630.394 11515.0 22.309799194335938 37 17 2 10 8 3.232247284769827 23.95049838823344 0.0 4 0.9721671681956802 7.3802519580882535 11515.0 10.846153846153847 0.0 - - - - - - - 408.3333333333333 23 9 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 2211 278 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1862.[MT7]-ATIISEQQAK[MT7].3y1_1.heavy 459.604 / 291.215 52918.0 22.309799194335938 37 17 2 10 8 3.232247284769827 23.95049838823344 0.0 4 0.9721671681956802 7.3802519580882535 52918.0 5.880174521292039 1.0 - - - - - - - 4410.0 387 2 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 2213 278 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1862.[MT7]-ATIISEQQAK[MT7].3y2_1.heavy 459.604 / 362.252 75702.0 22.309799194335938 37 17 2 10 8 3.232247284769827 23.95049838823344 0.0 4 0.9721671681956802 7.3802519580882535 75702.0 69.84995918367348 0.0 - - - - - - - 910.0 151 7 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 2215 279 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1726.[MT7]-ELAEAVAGGR.2y8_1.heavy 558.81 / 730.384 56094.0 24.670499801635742 43 13 10 10 10 5.717852136441203 17.4890846446827 0.0 3 0.9138689566033862 4.174600340854987 56094.0 105.53436218057215 0.0 - - - - - - - 743.875 112 8 UBA2 ubiquitin-like modifier activating enzyme 2 2217 279 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1726.[MT7]-ELAEAVAGGR.2y9_1.heavy 558.81 / 843.468 75642.0 24.670499801635742 43 13 10 10 10 5.717852136441203 17.4890846446827 0.0 3 0.9138689566033862 4.174600340854987 75642.0 107.81189570169974 0.0 - - - - - - - 743.875 151 8 UBA2 ubiquitin-like modifier activating enzyme 2 2219 279 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1726.[MT7]-ELAEAVAGGR.2y6_1.heavy 558.81 / 530.305 35980.0 24.670499801635742 43 13 10 10 10 5.717852136441203 17.4890846446827 0.0 3 0.9138689566033862 4.174600340854987 35980.0 21.448097284801676 0.0 - - - - - - - 283.0 71 2 UBA2 ubiquitin-like modifier activating enzyme 2 2221 279 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1726.[MT7]-ELAEAVAGGR.2b5_1.heavy 558.81 / 658.353 24081.0 24.670499801635742 43 13 10 10 10 5.717852136441203 17.4890846446827 0.0 3 0.9138689566033862 4.174600340854987 24081.0 52.95371677559912 1.0 - - - - - - - 283.0 108 3 UBA2 ubiquitin-like modifier activating enzyme 2 2223 280 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1865.[MT7]-FRHENVIGIR.3b6_2.heavy 462.269 / 464.25 10125.0 23.39539909362793 47 17 10 10 10 27.387779730049967 3.6512634826794534 0.0 3 0.9713105700889477 7.268714326629306 10125.0 40.51800800355714 0.0 - - - - - - - 260.0 20 6 MAPK3 mitogen-activated protein kinase 3 2225 280 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1865.[MT7]-FRHENVIGIR.3y6_1.heavy 462.269 / 671.42 11683.0 23.39539909362793 47 17 10 10 10 27.387779730049967 3.6512634826794534 0.0 3 0.9713105700889477 7.268714326629306 11683.0 78.18623076923078 0.0 - - - - - - - 260.0 23 8 MAPK3 mitogen-activated protein kinase 3 2227 280 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1865.[MT7]-FRHENVIGIR.3b5_1.heavy 462.269 / 828.423 4673.0 23.39539909362793 47 17 10 10 10 27.387779730049967 3.6512634826794534 0.0 3 0.9713105700889477 7.268714326629306 4673.0 10.627322958401505 1.0 - - - - - - - 260.0 11 2 MAPK3 mitogen-activated protein kinase 3 2229 280 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1865.[MT7]-FRHENVIGIR.3y5_1.heavy 462.269 / 557.377 10904.0 23.39539909362793 47 17 10 10 10 27.387779730049967 3.6512634826794534 0.0 3 0.9713105700889477 7.268714326629306 10904.0 23.032114587893673 0.0 - - - - - - - 627.3333333333334 21 12 MAPK3 mitogen-activated protein kinase 3 2231 281 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1725.[MT7]-GQPFDVGPR.2b6_1.heavy 558.8 / 788.406 21948.0 25.616100311279297 32 2 10 10 10 0.2819814458020282 130.3162681535275 0.0 3 0.465183756399609 1.6057064261598375 21948.0 52.538256323777404 0.0 - - - - - - - 297.0 43 5 MAPK3 mitogen-activated protein kinase 3 2233 281 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1725.[MT7]-GQPFDVGPR.2y6_1.heavy 558.8 / 690.357 16906.0 25.616100311279297 32 2 10 10 10 0.2819814458020282 130.3162681535275 0.0 3 0.465183756399609 1.6057064261598375 16906.0 24.063227527037437 0.0 - - - - - - - 297.0 33 3 MAPK3 mitogen-activated protein kinase 3 2235 281 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1725.[MT7]-GQPFDVGPR.2b5_1.heavy 558.8 / 689.338 135245.0 25.616100311279297 32 2 10 10 10 0.2819814458020282 130.3162681535275 0.0 3 0.465183756399609 1.6057064261598375 135245.0 519.2389051222497 0.0 - - - - - - - 762.7142857142857 270 7 MAPK3 mitogen-activated protein kinase 3 2237 281 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1725.[MT7]-GQPFDVGPR.2y7_1.heavy 558.8 / 787.41 119526.0 25.616100311279297 32 2 10 10 10 0.2819814458020282 130.3162681535275 0.0 3 0.465183756399609 1.6057064261598375 119526.0 251.36259506379827 0.0 - - - - - - - 297.0 239 2 MAPK3 mitogen-activated protein kinase 3 2239 282 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1864.[MT7]-LRFEDTLEFVGFDAK[MT7].3b6_1.heavy 692.373 / 906.48 4477.0 39.55367565155029 34 8 10 6 10 1.7230542138557434 58.03647917509585 0.039897918701171875 3 0.7695485716512257 2.5197401655954574 4477.0 26.483661971830983 0.0 - - - - - - - 298.2 8 5 CUL4B cullin 4B 2241 282 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1864.[MT7]-LRFEDTLEFVGFDAK[MT7].3b5_1.heavy 692.373 / 805.432 4264.0 39.55367565155029 34 8 10 6 10 1.7230542138557434 58.03647917509585 0.039897918701171875 3 0.7695485716512257 2.5197401655954574 4264.0 9.309201877934273 1.0 - - - - - - - 331.3333333333333 8 9 CUL4B cullin 4B 2243 282 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1864.[MT7]-LRFEDTLEFVGFDAK[MT7].3b8_1.heavy 692.373 / 1148.61 9594.0 39.55367565155029 34 8 10 6 10 1.7230542138557434 58.03647917509585 0.039897918701171875 3 0.7695485716512257 2.5197401655954574 9594.0 28.510338908450702 0.0 - - - - - - - 298.2 19 10 CUL4B cullin 4B 2245 282 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1864.[MT7]-LRFEDTLEFVGFDAK[MT7].3y5_1.heavy 692.373 / 681.369 43919.0 39.55367565155029 34 8 10 6 10 1.7230542138557434 58.03647917509585 0.039897918701171875 3 0.7695485716512257 2.5197401655954574 43919.0 35.571640983589724 0.0 - - - - - - - 298.2 87 5 CUL4B cullin 4B 2247 283 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1728.[MT7]-EAFQDDPR.2y4_1.heavy 561.271 / 502.226 1483.0 20.392650604248047 36 13 10 3 10 2.644175295681235 37.818975225784484 0.07789993286132812 3 0.9264080283136761 4.5211309620190665 1483.0 7.4056132075471695 25.0 - - - - - - - 366.1818181818182 5 11 CUL5 cullin 5 2249 283 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1728.[MT7]-EAFQDDPR.2b4_1.heavy 561.271 / 620.316 4238.0 20.392650604248047 36 13 10 3 10 2.644175295681235 37.818975225784484 0.07789993286132812 3 0.9264080283136761 4.5211309620190665 4238.0 2.165408805031447 1.0 - - - - - - - 238.5 8 8 CUL5 cullin 5 2251 283 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1728.[MT7]-EAFQDDPR.2b6_1.heavy 561.271 / 850.37 64834.0 20.392650604248047 36 13 10 3 10 2.644175295681235 37.818975225784484 0.07789993286132812 3 0.9264080283136761 4.5211309620190665 64834.0 315.8965484293693 0.0 - - - - - - - 212.0 129 1 CUL5 cullin 5 2253 283 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1728.[MT7]-EAFQDDPR.2b5_1.heavy 561.271 / 735.343 7416.0 20.392650604248047 36 13 10 3 10 2.644175295681235 37.818975225784484 0.07789993286132812 3 0.9264080283136761 4.5211309620190665 7416.0 23.903773584905657 0.0 - - - - - - - 366.1818181818182 14 11 CUL5 cullin 5 2255 284 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1658.[MT7]-TLLTFK[MT7].2y4_1.heavy 505.828 / 652.415 22710.0 32.778099060058594 27 10 6 5 6 0.801850621972498 72.05033489109007 0.04759979248046875 5 0.8235552080163732 2.8937097394512667 22710.0 105.1524115755627 0.0 - - - - - - - 311.0 45 2 RFWD2 ring finger and WD repeat domain 2 2257 284 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1658.[MT7]-TLLTFK[MT7].2y5_1.heavy 505.828 / 765.499 16799.0 32.778099060058594 27 10 6 5 6 0.801850621972498 72.05033489109007 0.04759979248046875 5 0.8235552080163732 2.8937097394512667 16799.0 37.743733922829584 0.0 - - - - - - - 311.0 33 2 RFWD2 ring finger and WD repeat domain 2 2259 284 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1658.[MT7]-TLLTFK[MT7].2y3_1.heavy 505.828 / 539.331 34843.0 32.778099060058594 27 10 6 5 6 0.801850621972498 72.05033489109007 0.04759979248046875 5 0.8235552080163732 2.8937097394512667 34843.0 137.99023043944266 0.0 - - - - - - - 311.0 69 2 RFWD2 ring finger and WD repeat domain 2 2261 284 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1658.[MT7]-TLLTFK[MT7].2y1_1.heavy 505.828 / 291.215 17732.0 32.778099060058594 27 10 6 5 6 0.801850621972498 72.05033489109007 0.04759979248046875 5 0.8235552080163732 2.8937097394512667 17732.0 14.537954163913923 2.0 - - - - - - - 311.0 108 1 RFWD2 ring finger and WD repeat domain 2 2263 285 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1861.[MT7]-IREVAQTADAR.2y9_1.heavy 687.385 / 960.474 2478.0 19.87310028076172 50 20 10 10 10 5.15165239430217 13.85135291117551 0.0 3 0.9964737809383006 20.776865323157434 2478.0 10.78840579710145 0.0 - - - - - - - 310.0 4 2 PLCG1 phospholipase C, gamma 1 2265 285 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1861.[MT7]-IREVAQTADAR.2b7_1.heavy 687.385 / 942.549 2685.0 19.87310028076172 50 20 10 10 10 5.15165239430217 13.85135291117551 0.0 3 0.9964737809383006 20.776865323157434 2685.0 14.268115942028984 0.0 - - - - - - - 289.4 5 5 PLCG1 phospholipase C, gamma 1 2267 285 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1861.[MT7]-IREVAQTADAR.2b9_1.heavy 687.385 / 1128.61 23954.0 19.87310028076172 50 20 10 10 10 5.15165239430217 13.85135291117551 0.0 3 0.9964737809383006 20.776865323157434 23954.0 136.60541062801934 0.0 - - - - - - - 310.0 47 10 PLCG1 phospholipase C, gamma 1 2269 285 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1861.[MT7]-IREVAQTADAR.2y7_1.heavy 687.385 / 732.364 1446.0 19.87310028076172 50 20 10 10 10 5.15165239430217 13.85135291117551 0.0 3 0.9964737809383006 20.776865323157434 1446.0 8.851764375876577 0.0 - - - - - - - 275.6666666666667 2 3 PLCG1 phospholipase C, gamma 1 2271 286 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1654.[MT7]-LADFGLAR.2y5_1.heavy 503.794 / 563.33 93639.0 32.70600128173828 46 16 10 10 10 2.881984994691426 34.69830696002877 0.0 3 0.9638682936237686 6.472942277319665 93639.0 180.20611676543277 0.0 - - - - - - - 311.0 187 4 CDK2;CDK3;CDK4;CDK5;CDK6;CDK9;CDK16;CDK17;CDK18;CDK12;CDK14;CDK15;CDK13;CDK1 cyclin-dependent kinase 2;cyclin-dependent kinase 3;cyclin-dependent kinase 4;cyclin-dependent kinase 5;cyclin-dependent kinase 6;cyclin-dependent kinase 9;cyclin-dependent kinase 16;cyclin-dependent kinase 17;cyclin-dependent kinase 18;cyclin-dependent kinase 12;cyclin-dependent kinase 14;cyclin-dependent kinase 15;cyclin-dependent kinase 13;cyclin-dependent kinase 1 2273 286 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1654.[MT7]-LADFGLAR.2y6_1.heavy 503.794 / 678.357 16177.0 32.70600128173828 46 16 10 10 10 2.881984994691426 34.69830696002877 0.0 3 0.9638682936237686 6.472942277319665 16177.0 34.06607282174577 0.0 - - - - - - - 311.0 32 8 CDK2;CDK3;CDK4;CDK5;CDK6;CDK9;CDK16;CDK17;CDK18;CDK12;CDK14;CDK15;CDK13;CDK1 cyclin-dependent kinase 2;cyclin-dependent kinase 3;cyclin-dependent kinase 4;cyclin-dependent kinase 5;cyclin-dependent kinase 6;cyclin-dependent kinase 9;cyclin-dependent kinase 16;cyclin-dependent kinase 17;cyclin-dependent kinase 18;cyclin-dependent kinase 12;cyclin-dependent kinase 14;cyclin-dependent kinase 15;cyclin-dependent kinase 13;cyclin-dependent kinase 1 2275 286 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1654.[MT7]-LADFGLAR.2b5_1.heavy 503.794 / 648.347 25510.0 32.70600128173828 46 16 10 10 10 2.881984994691426 34.69830696002877 0.0 3 0.9638682936237686 6.472942277319665 25510.0 96.7903536977492 0.0 - - - - - - - 311.0 51 4 CDK2;CDK3;CDK4;CDK5;CDK6;CDK9;CDK16;CDK17;CDK18;CDK12;CDK14;CDK15;CDK13;CDK1 cyclin-dependent kinase 2;cyclin-dependent kinase 3;cyclin-dependent kinase 4;cyclin-dependent kinase 5;cyclin-dependent kinase 6;cyclin-dependent kinase 9;cyclin-dependent kinase 16;cyclin-dependent kinase 17;cyclin-dependent kinase 18;cyclin-dependent kinase 12;cyclin-dependent kinase 14;cyclin-dependent kinase 15;cyclin-dependent kinase 13;cyclin-dependent kinase 1 2277 286 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1654.[MT7]-LADFGLAR.2y7_1.heavy 503.794 / 749.394 80884.0 32.70600128173828 46 16 10 10 10 2.881984994691426 34.69830696002877 0.0 3 0.9638682936237686 6.472942277319665 80884.0 184.65479099678453 0.0 - - - - - - - 311.0 161 7 CDK2;CDK3;CDK4;CDK5;CDK6;CDK9;CDK16;CDK17;CDK18;CDK12;CDK14;CDK15;CDK13;CDK1 cyclin-dependent kinase 2;cyclin-dependent kinase 3;cyclin-dependent kinase 4;cyclin-dependent kinase 5;cyclin-dependent kinase 6;cyclin-dependent kinase 9;cyclin-dependent kinase 16;cyclin-dependent kinase 17;cyclin-dependent kinase 18;cyclin-dependent kinase 12;cyclin-dependent kinase 14;cyclin-dependent kinase 15;cyclin-dependent kinase 13;cyclin-dependent kinase 1 2279 287 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1653.[MT7]-VFLPNK[MT7].2y4_1.heavy 503.32 / 615.395 41934.0 27.56410026550293 47 17 10 10 10 3.8055259051424337 22.40797297877605 0.0 3 0.9798182978462325 8.672620759555157 41934.0 82.06161230769231 0.0 - - - - - - - 325.0 83 7 RAF1;BRAF v-raf-1 murine leukemia viral oncogene homolog 1;v-raf murine sarcoma viral oncogene homolog B1 2281 287 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1653.[MT7]-VFLPNK[MT7].2y5_1.heavy 503.32 / 762.463 52986.0 27.56410026550293 47 17 10 10 10 3.8055259051424337 22.40797297877605 0.0 3 0.9798182978462325 8.672620759555157 52986.0 130.10100923076925 0.0 - - - - - - - 731.25 105 8 RAF1;BRAF v-raf-1 murine leukemia viral oncogene homolog 1;v-raf murine sarcoma viral oncogene homolog B1 2283 287 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1653.[MT7]-VFLPNK[MT7].2y3_1.heavy 503.32 / 502.311 222021.0 27.56410026550293 47 17 10 10 10 3.8055259051424337 22.40797297877605 0.0 3 0.9798182978462325 8.672620759555157 222021.0 220.2995743852661 0.0 - - - - - - - 650.0 444 4 RAF1;BRAF v-raf-1 murine leukemia viral oncogene homolog 1;v-raf murine sarcoma viral oncogene homolog B1 2285 287 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1653.[MT7]-VFLPNK[MT7].2y1_1.heavy 503.32 / 291.215 38683.0 27.56410026550293 47 17 10 10 10 3.8055259051424337 22.40797297877605 0.0 3 0.9798182978462325 8.672620759555157 38683.0 12.965010685997186 0.0 - - - - - - - 2275.0 77 1 RAF1;BRAF v-raf-1 murine leukemia viral oncogene homolog 1;v-raf murine sarcoma viral oncogene homolog B1 2287 288 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2200.[MT7]-LDAVLQR.2y4_1.heavy 479.794 / 515.33 15667.0 28.170499801635742 44 14 10 10 10 2.0682656950611342 38.285072204937215 0.0 3 0.9492787555654805 5.456503577229764 15667.0 61.727979999999995 0.0 - - - - - - - 333.0 31 3 PML promyelocytic leukemia 2289 288 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2200.[MT7]-LDAVLQR.2y5_1.heavy 479.794 / 586.367 29000.0 28.170499801635742 44 14 10 10 10 2.0682656950611342 38.285072204937215 0.0 3 0.9492787555654805 5.456503577229764 29000.0 56.23869565217392 0.0 - - - - - - - 333.0 58 1 PML promyelocytic leukemia 2291 288 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2200.[MT7]-LDAVLQR.2b4_1.heavy 479.794 / 543.326 23667.0 28.170499801635742 44 14 10 10 10 2.0682656950611342 38.285072204937215 0.0 3 0.9492787555654805 5.456503577229764 23667.0 21.084734742296156 0.0 - - - - - - - 333.0 47 3 PML promyelocytic leukemia 2293 288 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2200.[MT7]-LDAVLQR.2y6_1.heavy 479.794 / 701.394 45667.0 28.170499801635742 44 14 10 10 10 2.0682656950611342 38.285072204937215 0.0 3 0.9492787555654805 5.456503577229764 45667.0 140.69467861261262 0.0 - - - - - - - 333.0 91 2 PML promyelocytic leukemia 2295 289 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2491.[MT7]-NFPALLSTGEFLK[MT7].3y3_1.heavy 575.666 / 551.367 61101.0 40.84130096435547 46 16 10 10 10 2.7405113487229564 36.48954055475769 0.0 3 0.9665085110047376 6.724740535589452 61101.0 136.8054190751445 0.0 - - - - - - - 330.8 122 10 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 2297 289 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2491.[MT7]-NFPALLSTGEFLK[MT7].3b4_1.heavy 575.666 / 574.311 86204.0 40.84130096435547 46 16 10 10 10 2.7405113487229564 36.48954055475769 0.0 3 0.9665085110047376 6.724740535589452 86204.0 249.06206981825483 0.0 - - - - - - - 259.6666666666667 172 6 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 2299 289 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2491.[MT7]-NFPALLSTGEFLK[MT7].3b5_1.heavy 575.666 / 687.395 74723.0 40.84130096435547 46 16 10 10 10 2.7405113487229564 36.48954055475769 0.0 3 0.9665085110047376 6.724740535589452 74723.0 395.80090869877785 0.0 - - - - - - - 278.14285714285717 149 7 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 2301 289 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2491.[MT7]-NFPALLSTGEFLK[MT7].3y5_1.heavy 575.666 / 737.431 32302.0 40.84130096435547 46 16 10 10 10 2.7405113487229564 36.48954055475769 0.0 3 0.9665085110047376 6.724740535589452 32302.0 38.8595941503465 1.0 - - - - - - - 259.6666666666667 76 6 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 2303 290 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1655.[MT7]-AIFQIK[MT7].2y4_1.heavy 504.328 / 679.426 19608.0 31.563899358113606 33 18 0 5 10 3.175403016386276 24.928947675735728 0.0485992431640625 3 0.9863984739584244 10.57000185001127 19608.0 82.14972477064221 0.0 - - - - - - - 327.0 39 1 ATM;LOC651610 ataxia telangiectasia mutated;serine-protein kinase ATM-like 2305 290 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1655.[MT7]-AIFQIK[MT7].2y5_1.heavy 504.328 / 792.51 9804.0 31.563899358113606 33 18 0 5 10 3.175403016386276 24.928947675735728 0.0485992431640625 3 0.9863984739584244 10.57000185001127 9804.0 9.203836734693878 1.0 - - - - - - - 327.0 19 2 ATM;LOC651610 ataxia telangiectasia mutated;serine-protein kinase ATM-like 2307 290 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1655.[MT7]-AIFQIK[MT7].2b4_1.heavy 504.328 / 604.357 9477.0 31.563899358113606 33 18 0 5 10 3.175403016386276 24.928947675735728 0.0485992431640625 3 0.9863984739584244 10.57000185001127 9477.0 36.52634413031267 0.0 - - - - - - - 327.0 18 1 ATM;LOC651610 ataxia telangiectasia mutated;serine-protein kinase ATM-like 2309 290 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1655.[MT7]-AIFQIK[MT7].2y1_1.heavy 504.328 / 291.215 N/A 31.563899358113606 33 18 0 5 10 3.175403016386276 24.928947675735728 0.0485992431640625 3 0.9863984739584244 10.57000185001127 18954.0 9.65321627861606 2.0 - - - - - - - 980.0 133 1 ATM;LOC651610 ataxia telangiectasia mutated;serine-protein kinase ATM-like 2311 291 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2108.[MT7]-ATLNPVWNETFVFNLK[MT7]PGDVER.4y9_1.heavy 709.382 / 1171.66 3653.0 40.633724212646484 42 20 10 2 10 4.489107958853729 22.276140586633275 0.08190155029296875 3 0.9945868622679555 16.766473557453118 3653.0 18.71487684729064 0.0 - - - - - - - 290.0 7 7 PRKCG protein kinase C, gamma 2313 291 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2108.[MT7]-ATLNPVWNETFVFNLK[MT7]PGDVER.4y6_1.heavy 709.382 / 672.331 17451.0 40.633724212646484 42 20 10 2 10 4.489107958853729 22.276140586633275 0.08190155029296875 3 0.9945868622679555 16.766473557453118 17451.0 12.498308488859738 0.0 - - - - - - - 338.3333333333333 34 3 PRKCG protein kinase C, gamma 2315 291 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2108.[MT7]-ATLNPVWNETFVFNLK[MT7]PGDVER.4b6_1.heavy 709.382 / 740.442 14002.0 40.633724212646484 42 20 10 2 10 4.489107958853729 22.276140586633275 0.08190155029296875 3 0.9945868622679555 16.766473557453118 14002.0 31.72866995073892 0.0 - - - - - - - 659.75 28 8 PRKCG protein kinase C, gamma 2317 291 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2108.[MT7]-ATLNPVWNETFVFNLK[MT7]PGDVER.4b4_1.heavy 709.382 / 544.321 52354.0 40.633724212646484 42 20 10 2 10 4.489107958853729 22.276140586633275 0.08190155029296875 3 0.9945868622679555 16.766473557453118 52354.0 57.912102983492346 0.0 - - - - - - - 338.3333333333333 104 3 PRKCG protein kinase C, gamma 2319 292 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1720.[MT7]-SPTEPGPER.2b8_1.heavy 557.286 / 939.454 1402.0 16.2539005279541 46 20 10 10 6 15.450445699262895 6.47230519730384 0.0 5 0.9994593583342606 53.07476074457482 1402.0 4.922403442622388 1.0 - - - - - - - 233.875 2 8 WEE1 WEE1 homolog (S. pombe) 2321 292 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1720.[MT7]-SPTEPGPER.2y6_1.heavy 557.286 / 684.331 2025.0 16.2539005279541 46 20 10 10 6 15.450445699262895 6.47230519730384 0.0 5 0.9994593583342606 53.07476074457482 2025.0 7.986298462773181 0.0 - - - - - - - 259.8333333333333 4 12 WEE1 WEE1 homolog (S. pombe) 2323 292 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1720.[MT7]-SPTEPGPER.2y8_1.heavy 557.286 / 882.432 19941.0 16.2539005279541 46 20 10 10 6 15.450445699262895 6.47230519730384 0.0 5 0.9994593583342606 53.07476074457482 19941.0 156.95525234596863 0.0 - - - - - - - 342.7 39 10 WEE1 WEE1 homolog (S. pombe) 2325 292 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1720.[MT7]-SPTEPGPER.2y7_1.heavy 557.286 / 785.379 2025.0 16.2539005279541 46 20 10 10 6 15.450445699262895 6.47230519730384 0.0 5 0.9994593583342606 53.07476074457482 2025.0 2.4017130620985014 3.0 - - - - - - - 249.4 6 10 WEE1 WEE1 homolog (S. pombe) 2327 293 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1650.[MT7]-QDAGTPK[MT7].2y4_1.heavy 502.784 / 546.337 7549.0 13.645999908447266 41 14 10 7 10 2.396854982680576 31.524510156530326 0.02519989013671875 3 0.9475858763448859 5.366891048221227 7549.0 56.24745098039216 0.0 - - - - - - - 246.94736842105263 15 19 PLCG1 phospholipase C, gamma 1 2329 293 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1650.[MT7]-QDAGTPK[MT7].2b4_1.heavy 502.784 / 516.253 3775.0 13.645999908447266 41 14 10 7 10 2.396854982680576 31.524510156530326 0.02519989013671875 3 0.9475858763448859 5.366891048221227 3775.0 28.682598039215684 1.0 - - - - - - - 204.0 7 23 PLCG1 phospholipase C, gamma 1 2331 293 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1650.[MT7]-QDAGTPK[MT7].2b6_1.heavy 502.784 / 714.354 3367.0 13.645999908447266 41 14 10 7 10 2.396854982680576 31.524510156530326 0.02519989013671875 3 0.9475858763448859 5.366891048221227 3367.0 18.815588235294115 0.0 - - - - - - - 626.5714285714286 6 7 PLCG1 phospholipase C, gamma 1 2333 293 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1650.[MT7]-QDAGTPK[MT7].2y6_1.heavy 502.784 / 732.401 20404.0 13.645999908447266 41 14 10 7 10 2.396854982680576 31.524510156530326 0.02519989013671875 3 0.9475858763448859 5.366891048221227 20404.0 64.17924836601307 0.0 - - - - - - - 775.2 40 10 PLCG1 phospholipase C, gamma 1 2335 294 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1867.[MT7]-YLAIAPPIIK[MT7].2y4_1.heavy 693.952 / 614.436 10772.0 36.803351402282715 39 13 10 6 10 2.6797073868691337 37.31750731069041 0.039402008056640625 3 0.9250620114611505 4.479826641981189 10772.0 21.1258835546476 0.0 - - - - - - - 420.0 21 7 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 2337 294 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1867.[MT7]-YLAIAPPIIK[MT7].2y5_1.heavy 693.952 / 711.489 71729.0 36.803351402282715 39 13 10 6 10 2.6797073868691337 37.31750731069041 0.039402008056640625 3 0.9250620114611505 4.479826641981189 71729.0 119.98904685579953 0.0 - - - - - - - 343.0 143 5 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 2339 294 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1867.[MT7]-YLAIAPPIIK[MT7].2b4_1.heavy 693.952 / 605.378 42597.0 36.803351402282715 39 13 10 6 10 2.6797073868691337 37.31750731069041 0.039402008056640625 3 0.9250620114611505 4.479826641981189 42597.0 56.95526465732101 0.0 - - - - - - - 294.0 85 5 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 2341 294 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1867.[MT7]-YLAIAPPIIK[MT7].2y6_1.heavy 693.952 / 782.526 34763.0 36.803351402282715 39 13 10 6 10 2.6797073868691337 37.31750731069041 0.039402008056640625 3 0.9250620114611505 4.479826641981189 34763.0 82.94015696591846 0.0 - - - - - - - 280.0 69 7 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 2343 295 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2493.[MT7]-LQELAFQTIQEIR.3y6_1.heavy 578.329 / 759.436 110004.0 41.97169876098633 44 14 10 10 10 1.5065825019647554 45.48152418314088 0.0 3 0.9377534565469312 4.920687823549279 110004.0 284.4197352075842 0.0 - - - - - - - 355.0 220 3 DNA2 DNA replication helicase 2 homolog (yeast) 2345 295 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2493.[MT7]-LQELAFQTIQEIR.3b4_1.heavy 578.329 / 628.379 89422.0 41.97169876098633 44 14 10 10 10 1.5065825019647554 45.48152418314088 0.0 3 0.9377534565469312 4.920687823549279 89422.0 511.4039918300068 0.0 - - - - - - - 278.7142857142857 178 7 DNA2 DNA replication helicase 2 homolog (yeast) 2347 295 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2493.[MT7]-LQELAFQTIQEIR.3b5_1.heavy 578.329 / 699.416 173522.0 41.97169876098633 44 14 10 10 10 1.5065825019647554 45.48152418314088 0.0 3 0.9377534565469312 4.920687823549279 173522.0 1115.8706850623653 0.0 - - - - - - - 828.0 347 3 DNA2 DNA replication helicase 2 homolog (yeast) 2349 295 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2493.[MT7]-LQELAFQTIQEIR.3b3_1.heavy 578.329 / 515.295 105568.0 41.97169876098633 44 14 10 10 10 1.5065825019647554 45.48152418314088 0.0 3 0.9377534565469312 4.920687823549279 105568.0 204.65879797386347 0.0 - - - - - - - 665.125 211 8 DNA2 DNA replication helicase 2 homolog (yeast) 2351 296 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1866.[MT7]-NPQAVLDVLK[MT7].2y4_1.heavy 692.924 / 618.394 5051.0 35.20510005950928 40 17 10 5 8 2.535536108360452 31.527267852221506 0.041599273681640625 4 0.9730577867681649 7.5018057025409774 5051.0 7.868068381222983 1.0 - - - - - - - 738.8888888888889 10 9 PAK2;PAK3 p21 protein (Cdc42/Rac)-activated kinase 2;p21 protein (Cdc42/Rac)-activated kinase 3 2353 296 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1866.[MT7]-NPQAVLDVLK[MT7].2y9_1.heavy 692.924 / 1126.7 6912.0 35.20510005950928 40 17 10 5 8 2.535536108360452 31.527267852221506 0.041599273681640625 4 0.9730577867681649 7.5018057025409774 6912.0 21.134436090225563 0.0 - - - - - - - 266.0 13 3 PAK2;PAK3 p21 protein (Cdc42/Rac)-activated kinase 2;p21 protein (Cdc42/Rac)-activated kinase 3 2355 296 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1866.[MT7]-NPQAVLDVLK[MT7].2y3_1.heavy 692.924 / 503.367 5051.0 35.20510005950928 40 17 10 5 8 2.535536108360452 31.527267852221506 0.041599273681640625 4 0.9730577867681649 7.5018057025409774 5051.0 5.51155222134013 1.0 - - - - - - - 1101.0 10 7 PAK2;PAK3 p21 protein (Cdc42/Rac)-activated kinase 2;p21 protein (Cdc42/Rac)-activated kinase 3 2357 296 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1866.[MT7]-NPQAVLDVLK[MT7].2y7_1.heavy 692.924 / 901.584 3190.0 35.20510005950928 40 17 10 5 8 2.535536108360452 31.527267852221506 0.041599273681640625 4 0.9730577867681649 7.5018057025409774 3190.0 3.757724300721714 3.0 - - - - - - - 266.0 11 3 PAK2;PAK3 p21 protein (Cdc42/Rac)-activated kinase 2;p21 protein (Cdc42/Rac)-activated kinase 3 2359 297 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1722.[MT7]-YLAEFATGNDRK[MT7].3y10_2.heavy 558.301 / 626.824 18000.0 29.434499740600586 41 11 10 10 10 0.7466344419903475 76.91052322512829 0.0 3 0.854641834680251 3.1969502346221237 18000.0 20.25303825956489 0.0 - - - - - - - 333.0 36 2 YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2361 297 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1722.[MT7]-YLAEFATGNDRK[MT7].3y6_1.heavy 558.301 / 834.455 7000.0 29.434499740600586 41 11 10 10 10 0.7466344419903475 76.91052322512829 0.0 3 0.854641834680251 3.1969502346221237 7000.0 39.83483483483484 0.0 - - - - - - - 333.0 14 6 YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2363 297 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1722.[MT7]-YLAEFATGNDRK[MT7].3b4_1.heavy 558.301 / 621.336 11000.0 29.434499740600586 41 11 10 10 10 0.7466344419903475 76.91052322512829 0.0 3 0.854641834680251 3.1969502346221237 11000.0 35.50617384075749 0.0 - - - - - - - 333.0 22 4 YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2365 297 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1722.[MT7]-YLAEFATGNDRK[MT7].3y5_1.heavy 558.301 / 733.407 6000.0 29.434499740600586 41 11 10 10 10 0.7466344419903475 76.91052322512829 0.0 3 0.854641834680251 3.1969502346221237 6000.0 9.6 0.0 - - - - - - - 333.0 12 4 YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2367 298 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2205.[MT7]-QQPPPPR.2b3_1.heavy 482.278 / 498.279 N/A N/A - - - - - - - - - 0.0 - - - - - - - WEE1 WEE1 homolog (S. pombe) 2369 298 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2205.[MT7]-QQPPPPR.2y5_1.heavy 482.278 / 563.33 N/A N/A - - - - - - - - - 0.0 - - - - - - - WEE1 WEE1 homolog (S. pombe) 2371 298 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2205.[MT7]-QQPPPPR.2y6_1.heavy 482.278 / 691.389 N/A N/A - - - - - - - - - 0.0 - - - - - - - WEE1 WEE1 homolog (S. pombe) 2373 298 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2205.[MT7]-QQPPPPR.2y1_1.heavy 482.278 / 175.119 N/A N/A - - - - - - - - - 0.0 - - - - - - - WEE1 WEE1 homolog (S. pombe) 2375 299 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1869.[MT7]-DEVAHTVTESR.3b4_1.heavy 463.236 / 559.284 77502.0 18.11750030517578 43 13 10 10 10 3.5027503649520653 28.54899424194864 0.0 3 0.9279164506503745 4.5687807800135865 77502.0 263.3526926948987 0.0 - - - - - - - 286.57142857142856 155 7 AKT2 v-akt murine thymoma viral oncogene homolog 2 2377 299 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1869.[MT7]-DEVAHTVTESR.3b3_1.heavy 463.236 / 488.247 42125.0 18.11750030517578 43 13 10 10 10 3.5027503649520653 28.54899424194864 0.0 3 0.9279164506503745 4.5687807800135865 42125.0 81.46715918653761 0.0 - - - - - - - 651.2857142857143 84 7 AKT2 v-akt murine thymoma viral oncogene homolog 2 2379 299 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1869.[MT7]-DEVAHTVTESR.3b2_1.heavy 463.236 / 389.179 21336.0 18.11750030517578 43 13 10 10 10 3.5027503649520653 28.54899424194864 0.0 3 0.9279164506503745 4.5687807800135865 21336.0 55.31555555555556 0.0 - - - - - - - 250.625 42 8 AKT2 v-akt murine thymoma viral oncogene homolog 2 2381 299 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1869.[MT7]-DEVAHTVTESR.3y5_1.heavy 463.236 / 591.31 39389.0 18.11750030517578 43 13 10 10 10 3.5027503649520653 28.54899424194864 0.0 3 0.9279164506503745 4.5687807800135865 39389.0 48.98495836424459 0.0 - - - - - - - 243.0 78 3 AKT2 v-akt murine thymoma viral oncogene homolog 2 2383 300 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1721.[MT7]-LEVPEDIR.2y5_1.heavy 557.815 / 629.325 26000.0 29.313899993896484 34 11 10 5 8 0.8748660635422657 67.52259971281981 0.048198699951171875 4 0.8751748072266272 3.456102236380224 26000.0 22.461754273807706 0.0 - - - - - - - 333.0 52 3 ANAPC2;LOC650621 anaphase promoting complex subunit 2;anaphase-promoting complex subunit 2-like 2385 300 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1721.[MT7]-LEVPEDIR.2b6_1.heavy 557.815 / 827.427 35000.0 29.313899993896484 34 11 10 5 8 0.8748660635422657 67.52259971281981 0.048198699951171875 4 0.8751748072266272 3.456102236380224 35000.0 8.828077013126316 1.0 - - - - - - - 333.0 97 2 ANAPC2;LOC650621 anaphase promoting complex subunit 2;anaphase-promoting complex subunit 2-like 2387 300 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1721.[MT7]-LEVPEDIR.2y6_1.heavy 557.815 / 728.394 10333.0 29.313899993896484 34 11 10 5 8 0.8748660635422657 67.52259971281981 0.048198699951171875 4 0.8751748072266272 3.456102236380224 10333.0 16.159646670665868 0.0 - - - - - - - 333.0 20 3 ANAPC2;LOC650621 anaphase promoting complex subunit 2;anaphase-promoting complex subunit 2-like 2389 300 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1721.[MT7]-LEVPEDIR.2y7_1.heavy 557.815 / 857.436 22333.0 29.313899993896484 34 11 10 5 8 0.8748660635422657 67.52259971281981 0.048198699951171875 4 0.8751748072266272 3.456102236380224 22333.0 9.195347026520933 1.0 - - - - - - - 333.0 45 3 ANAPC2;LOC650621 anaphase promoting complex subunit 2;anaphase-promoting complex subunit 2-like 2391 301 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1651.[MT7]-QAFHSK[MT7].2y4_1.heavy 503.29 / 662.374 1443.0 15.544500350952148 44 16 10 10 8 16.30541216736172 6.132932977932835 0.0 4 0.9637114364860859 6.45885193144996 1443.0 12.718821208622018 1.0 - - - - - - - 247.42857142857142 3 7 CDK6 cyclin-dependent kinase 6 2393 301 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1651.[MT7]-QAFHSK[MT7].2y5_1.heavy 503.29 / 733.411 4328.0 15.544500350952148 44 16 10 10 8 16.30541216736172 6.132932977932835 0.0 4 0.9637114364860859 6.45885193144996 4328.0 23.123224625810114 0.0 - - - - - - - 288.6923076923077 8 13 CDK6 cyclin-dependent kinase 6 2395 301 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1651.[MT7]-QAFHSK[MT7].2b4_1.heavy 503.29 / 628.332 1587.0 15.544500350952148 44 16 10 10 8 16.30541216736172 6.132932977932835 0.0 4 0.9637114364860859 6.45885193144996 1587.0 1.1001733102253033 1.0 - - - - - - - 224.55555555555554 3 9 CDK6 cyclin-dependent kinase 6 2397 301 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1651.[MT7]-QAFHSK[MT7].2y3_1.heavy 503.29 / 515.306 3318.0 15.544500350952148 44 16 10 10 8 16.30541216736172 6.132932977932835 0.0 4 0.9637114364860859 6.45885193144996 3318.0 5.289044597412498 0.0 - - - - - - - 233.07692307692307 6 13 CDK6 cyclin-dependent kinase 6 2399 302 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1868.[MT7]-DEVAHTVTESR.2y8_1.heavy 694.35 / 900.453 13910.0 18.11750030517578 48 18 10 10 10 3.0217642382195415 22.183697418662156 0.0 3 0.9828588337391516 9.412822470569772 13910.0 81.71174863387978 0.0 - - - - - - - 213.5 27 6 AKT2 v-akt murine thymoma viral oncogene homolog 2 2401 302 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1868.[MT7]-DEVAHTVTESR.2y9_1.heavy 694.35 / 999.522 4942.0 18.11750030517578 48 18 10 10 10 3.0217642382195415 22.183697418662156 0.0 3 0.9828588337391516 9.412822470569772 4942.0 52.09354098360655 1.0 - - - - - - - 183.0 20 4 AKT2 v-akt murine thymoma viral oncogene homolog 2 2403 302 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1868.[MT7]-DEVAHTVTESR.2b4_1.heavy 694.35 / 559.284 9700.0 18.11750030517578 48 18 10 10 10 3.0217642382195415 22.183697418662156 0.0 3 0.9828588337391516 9.412822470569772 9700.0 34.18852459016394 0.0 - - - - - - - 256.2 19 5 AKT2 v-akt murine thymoma viral oncogene homolog 2 2405 302 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1868.[MT7]-DEVAHTVTESR.2y7_1.heavy 694.35 / 829.416 10432.0 18.11750030517578 48 18 10 10 10 3.0217642382195415 22.183697418662156 0.0 3 0.9828588337391516 9.412822470569772 10432.0 77.81245901639345 0.0 - - - - - - - 235.28571428571428 20 7 AKT2 v-akt murine thymoma viral oncogene homolog 2 2407 303 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1774.[MT7]-VIHEC[CAM]QQR.3y3_1.heavy 405.212 / 431.236 8328.0 15.912699699401855 41 11 10 10 10 1.320592421756056 50.4823937865831 0.0 3 0.8718577530007009 3.410088202960986 8328.0 29.31749174917492 0.0 - - - - - - - 218.44444444444446 16 9 CUL2 cullin 2 2409 303 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1774.[MT7]-VIHEC[CAM]QQR.3b1_1.heavy 405.212 / 244.178 2574.0 15.912699699401855 41 11 10 10 10 1.320592421756056 50.4823937865831 0.0 3 0.8718577530007009 3.410088202960986 2574.0 1.8701453104359311 3.0 - - - - - - - 289.09090909090907 7 11 CUL2 cullin 2 2411 303 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1774.[MT7]-VIHEC[CAM]QQR.3y4_1.heavy 405.212 / 591.267 8025.0 15.912699699401855 41 11 10 10 10 1.320592421756056 50.4823937865831 0.0 3 0.8718577530007009 3.410088202960986 8025.0 91.41059602649008 0.0 - - - - - - - 201.5 16 6 CUL2 cullin 2 2413 303 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1774.[MT7]-VIHEC[CAM]QQR.3y5_1.heavy 405.212 / 720.309 5300.0 15.912699699401855 41 11 10 10 10 1.320592421756056 50.4823937865831 0.0 3 0.8718577530007009 3.410088202960986 5300.0 49.08578672436779 0.0 - - - - - - - 207.875 10 8 CUL2 cullin 2 2415 304 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1877.[MT7]-QIVDAQAVC[CAM]TR.2y8_1.heavy 702.873 / 920.425 21928.0 23.261799335479736 41 15 10 6 10 1.4512414229668944 43.00631493293943 0.03999900817871094 3 0.9516062204312191 5.587279791748597 21928.0 117.62145593869732 0.0 - - - - - - - 261.0 43 4 PML promyelocytic leukemia 2417 304 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1877.[MT7]-QIVDAQAVC[CAM]TR.2y9_1.heavy 702.873 / 1019.49 16968.0 23.261799335479736 41 15 10 6 10 1.4512414229668944 43.00631493293943 0.03999900817871094 3 0.9516062204312191 5.587279791748597 16968.0 39.65701149425287 0.0 - - - - - - - 261.0 33 3 PML promyelocytic leukemia 2419 304 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1877.[MT7]-QIVDAQAVC[CAM]TR.2y10_1.heavy 702.873 / 1132.58 16446.0 23.261799335479736 41 15 10 6 10 1.4512414229668944 43.00631493293943 0.03999900817871094 3 0.9516062204312191 5.587279791748597 16446.0 38.22697318007663 0.0 - - - - - - - 261.0 32 5 PML promyelocytic leukemia 2421 304 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1877.[MT7]-QIVDAQAVC[CAM]TR.2y7_1.heavy 702.873 / 805.398 21145.0 23.261799335479736 41 15 10 6 10 1.4512414229668944 43.00631493293943 0.03999900817871094 3 0.9516062204312191 5.587279791748597 21145.0 116.66206896551725 0.0 - - - - - - - 261.0 42 6 PML promyelocytic leukemia 2423 305 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1775.[MT7]-AALEAYC[CAM]K[MT7].2y4_1.heavy 607.328 / 685.346 21365.0 23.519699096679688 44 14 10 10 10 4.69162954792869 16.991042290958493 0.0 3 0.9405795740146251 5.037559330290239 21365.0 48.43950628345624 0.0 - - - - - - - 264.0 42 5 ANAPC2;LOC650621 anaphase promoting complex subunit 2;anaphase-promoting complex subunit 2-like 2425 305 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1775.[MT7]-AALEAYC[CAM]K[MT7].2y5_1.heavy 607.328 / 814.389 21629.0 23.519699096679688 44 14 10 10 10 4.69162954792869 16.991042290958493 0.0 3 0.9405795740146251 5.037559330290239 21629.0 51.632520178084164 0.0 - - - - - - - 264.0 43 3 ANAPC2;LOC650621 anaphase promoting complex subunit 2;anaphase-promoting complex subunit 2-like 2427 305 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1775.[MT7]-AALEAYC[CAM]K[MT7].2b4_1.heavy 607.328 / 529.31 15034.0 23.519699096679688 44 14 10 10 10 4.69162954792869 16.991042290958493 0.0 3 0.9405795740146251 5.037559330290239 15034.0 33.83125158027813 0.0 - - - - - - - 674.1111111111111 30 9 ANAPC2;LOC650621 anaphase promoting complex subunit 2;anaphase-promoting complex subunit 2-like 2429 305 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1775.[MT7]-AALEAYC[CAM]K[MT7].2y7_1.heavy 607.328 / 998.51 17936.0 23.519699096679688 44 14 10 10 10 4.69162954792869 16.991042290958493 0.0 3 0.9405795740146251 5.037559330290239 17936.0 88.2569660192315 0.0 - - - - - - - 264.0 35 9 ANAPC2;LOC650621 anaphase promoting complex subunit 2;anaphase-promoting complex subunit 2-like 2431 306 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1878.[MT7]-AYPDANLLNDR.2y8_1.heavy 703.363 / 930.464 8000.0 29.001300811767578 48 18 10 10 10 7.064026957146629 14.156231368685628 0.0 3 0.9809964105154175 8.93828870177019 8000.0 39.87987987987988 0.0 - - - - - - - 333.0 16 5 CCND1 cyclin D1 2433 306 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1878.[MT7]-AYPDANLLNDR.2y9_1.heavy 703.363 / 1027.52 58333.0 29.001300811767578 48 18 10 10 10 7.064026957146629 14.156231368685628 0.0 3 0.9809964105154175 8.93828870177019 58333.0 71.76753188297073 0.0 - - - - - - - 333.0 116 3 CCND1 cyclin D1 2435 306 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1878.[MT7]-AYPDANLLNDR.2y10_1.heavy 703.363 / 1190.58 14333.0 29.001300811767578 48 18 10 10 10 7.064026957146629 14.156231368685628 0.0 3 0.9809964105154175 8.93828870177019 14333.0 83.50156156156156 0.0 - - - - - - - 333.0 28 3 CCND1 cyclin D1 2437 306 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1878.[MT7]-AYPDANLLNDR.2y7_1.heavy 703.363 / 815.437 31667.0 29.001300811767578 48 18 10 10 10 7.064026957146629 14.156231368685628 0.0 3 0.9809964105154175 8.93828870177019 31667.0 40.38552138034508 0.0 - - - - - - - 333.0 63 3 CCND1 cyclin D1 2439 307 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1776.[MT7]-VILLENLTR.2y4_1.heavy 607.883 / 503.294 3195.0 38.13315010070801 45 20 10 5 10 8.208877203732616 12.181933962239015 0.042499542236328125 3 0.994101957260077 16.06181885473593 3195.0 16.9037552823665 0.0 - - - - - - - 370.5 6 8 CUL7 cullin 7 2441 307 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1776.[MT7]-VILLENLTR.2y8_1.heavy 607.883 / 971.588 9813.0 38.13315010070801 45 20 10 5 10 8.208877203732616 12.181933962239015 0.042499542236328125 3 0.994101957260077 16.06181885473593 9813.0 38.71400657894737 0.0 - - - - - - - 293.14285714285717 19 7 CUL7 cullin 7 2443 307 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1776.[MT7]-VILLENLTR.2y6_1.heavy 607.883 / 745.42 6390.0 38.13315010070801 45 20 10 5 10 8.208877203732616 12.181933962239015 0.042499542236328125 3 0.994101957260077 16.06181885473593 6390.0 20.35242412600845 0.0 - - - - - - - 304.0 12 12 CUL7 cullin 7 2445 307 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1776.[MT7]-VILLENLTR.2y7_1.heavy 607.883 / 858.504 7987.0 38.13315010070801 45 20 10 5 10 8.208877203732616 12.181933962239015 0.042499542236328125 3 0.994101957260077 16.06181885473593 7987.0 25.57885588423614 0.0 - - - - - - - 313.5 15 8 CUL7 cullin 7 2447 308 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1879.[MT7]-GVLDVPAC[CAM]QIAIRPEGK[MT7].3b4_1.heavy 704.401 / 529.31 61667.0 30.804500579833984 47 17 10 10 10 7.655672926525153 13.062209025874512 0.0 3 0.9773385233406712 8.182663500503201 61667.0 56.97057868516286 0.0 - - - - - - - 333.0 123 6 PLCG1 phospholipase C, gamma 1 2449 308 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1879.[MT7]-GVLDVPAC[CAM]QIAIRPEGK[MT7].3b5_1.heavy 704.401 / 628.379 27000.0 30.804500579833984 47 17 10 10 10 7.655672926525153 13.062209025874512 0.0 3 0.9773385233406712 8.182663500503201 27000.0 68.41079460269866 0.0 - - - - - - - 333.0 54 2 PLCG1 phospholipase C, gamma 1 2451 308 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1879.[MT7]-GVLDVPAC[CAM]QIAIRPEGK[MT7].3y4_1.heavy 704.401 / 574.332 9667.0 30.804500579833984 47 17 10 10 10 7.655672926525153 13.062209025874512 0.0 3 0.9773385233406712 8.182663500503201 9667.0 32.945272939856586 0.0 - - - - - - - 333.0 19 4 PLCG1 phospholipase C, gamma 1 2453 308 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1879.[MT7]-GVLDVPAC[CAM]QIAIRPEGK[MT7].3y12_2.heavy 704.401 / 742.412 56333.0 30.804500579833984 47 17 10 10 10 7.655672926525153 13.062209025874512 0.0 3 0.9773385233406712 8.182663500503201 56333.0 216.4845048048048 0.0 - - - - - - - 333.0 112 3 PLCG1 phospholipase C, gamma 1 2455 309 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1777.[MT7]-FWPIIQIR.2y6_1.heavy 608.87 / 739.482 23923.0 42.38654899597168 35 13 10 6 6 3.045668668394923 32.83351240327147 0.038501739501953125 5 0.9254508961005534 4.49164560373726 23923.0 201.14904936553418 0.0 - - - - - - - 274.42857142857144 47 7 CUL9;CUL7 cullin 9;cullin 7 2457 309 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1777.[MT7]-FWPIIQIR.2y4_1.heavy 608.87 / 529.346 1222.0 42.38654899597168 35 13 10 6 6 3.045668668394923 32.83351240327147 0.038501739501953125 5 0.9254508961005534 4.49164560373726 1222.0 6.652722063037249 7.0 - - - - - - - 269.90909090909093 4 11 CUL9;CUL7 cullin 9;cullin 7 2459 309 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1777.[MT7]-FWPIIQIR.2y5_1.heavy 608.87 / 642.43 1397.0 42.38654899597168 35 13 10 6 6 3.045668668394923 32.83351240327147 0.038501739501953125 5 0.9254508961005534 4.49164560373726 1397.0 7.717777535441658 6.0 - - - - - - - 233.0 3 6 CUL9;CUL7 cullin 9;cullin 7 2461 309 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1777.[MT7]-FWPIIQIR.2y1_1.heavy 608.87 / 175.119 5064.0 42.38654899597168 35 13 10 6 6 3.045668668394923 32.83351240327147 0.038501739501953125 5 0.9254508961005534 4.49164560373726 5064.0 9.47113489502724 0.0 - - - - - - - 310.3333333333333 10 9 CUL9;CUL7 cullin 9;cullin 7 2463 310 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1770.[MT7]-LIVNVNDLR.2y8_1.heavy 600.365 / 942.537 62143.0 33.79090118408203 46 16 10 10 10 10.782543101076321 9.274249967061845 0.0 3 0.9628847535877787 6.386070598303333 62143.0 37.774776086917036 1.0 - - - - - - - 295.0 127 7 MCM3 minichromosome maintenance complex component 3 2465 310 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1770.[MT7]-LIVNVNDLR.2b4_1.heavy 600.365 / 584.389 25623.0 33.79090118408203 46 16 10 10 10 10.782543101076321 9.274249967061845 0.0 3 0.9628847535877787 6.386070598303333 25623.0 12.850764006791172 1.0 - - - - - - - 295.0 51 6 MCM3 minichromosome maintenance complex component 3 2467 310 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1770.[MT7]-LIVNVNDLR.2y6_1.heavy 600.365 / 730.384 50068.0 33.79090118408203 46 16 10 10 10 10.782543101076321 9.274249967061845 0.0 3 0.9628847535877787 6.386070598303333 50068.0 56.95341256366723 0.0 - - - - - - - 295.0 100 3 MCM3 minichromosome maintenance complex component 3 2469 310 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1770.[MT7]-LIVNVNDLR.2y7_1.heavy 600.365 / 829.453 65382.0 33.79090118408203 46 16 10 10 10 10.782543101076321 9.274249967061845 0.0 3 0.9628847535877787 6.386070598303333 65382.0 155.40713073005094 0.0 - - - - - - - 295.0 130 1 MCM3 minichromosome maintenance complex component 3 2471 311 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1771.[MT7]-EEEPGAPGK[MT7].2b3_1.heavy 601.319 / 532.237 12653.0 16.73926607767741 40 15 10 5 10 2.4677961463118665 32.55532628939583 0.047199249267578125 3 0.9587610675847055 6.0562634960822335 12653.0 23.962813141683775 1.0 - - - - - - - 297.1666666666667 25 6 LIG1 ligase I, DNA, ATP-dependent 2473 311 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1771.[MT7]-EEEPGAPGK[MT7].2y5_1.heavy 601.319 / 573.348 N/A 16.73926607767741 40 15 10 5 10 2.4677961463118665 32.55532628939583 0.047199249267578125 3 0.9587610675847055 6.0562634960822335 2595.0 1.9911193816617274 17.0 - - - - - - - 831.25 12 8 LIG1 ligase I, DNA, ATP-dependent 2475 311 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1771.[MT7]-EEEPGAPGK[MT7].2y6_1.heavy 601.319 / 670.4 13302.0 16.73926607767741 40 15 10 5 10 2.4677961463118665 32.55532628939583 0.047199249267578125 3 0.9587610675847055 6.0562634960822335 13302.0 51.623778234086245 0.0 - - - - - - - 389.2 26 5 LIG1 ligase I, DNA, ATP-dependent 2477 311 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1771.[MT7]-EEEPGAPGK[MT7].2b5_1.heavy 601.319 / 686.311 1947.0 16.73926607767741 40 15 10 5 10 2.4677961463118665 32.55532628939583 0.047199249267578125 3 0.9587610675847055 6.0562634960822335 1947.0 16.225 0.0 - - - - - - - 185.14285714285714 3 7 LIG1 ligase I, DNA, ATP-dependent 2479 312 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1600.[MT7]-DLLLK[MT7].2b3_1.heavy 445.302 / 486.304 53000.0 29.145599365234375 50 20 10 10 10 12.304872246255986 8.126862107847327 0.0 3 0.9962730682721309 20.20931888666216 53000.0 155.78555795452698 1.0 - - - - - - - 333.0 111 2 CDK6;RASA3 cyclin-dependent kinase 6;RAS p21 protein activator 3 2481 312 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1600.[MT7]-DLLLK[MT7].2y4_1.heavy 445.302 / 630.467 64333.0 29.145599365234375 50 20 10 10 10 12.304872246255986 8.126862107847327 0.0 3 0.9962730682721309 20.20931888666216 64333.0 82.75337980190908 0.0 - - - - - - - 333.0 128 4 CDK6;RASA3 cyclin-dependent kinase 6;RAS p21 protein activator 3 2483 312 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1600.[MT7]-DLLLK[MT7].2b4_1.heavy 445.302 / 599.388 16333.0 29.145599365234375 50 20 10 10 10 12.304872246255986 8.126862107847327 0.0 3 0.9962730682721309 20.20931888666216 16333.0 66.18177397787593 0.0 - - - - - - - 333.0 32 7 CDK6;RASA3 cyclin-dependent kinase 6;RAS p21 protein activator 3 2485 312 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1600.[MT7]-DLLLK[MT7].2y3_1.heavy 445.302 / 517.383 57000.0 29.145599365234375 50 20 10 10 10 12.304872246255986 8.126862107847327 0.0 3 0.9962730682721309 20.20931888666216 57000.0 101.72556632411477 0.0 - - - - - - - 1237.857142857143 114 7 CDK6;RASA3 cyclin-dependent kinase 6;RAS p21 protein activator 3 2487 313 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1772.[MT7]-AEGVSTPLAGR.2y5_1.heavy 601.336 / 513.314 7457.0 23.04765033721924 45 20 10 5 10 8.117933874429456 12.31840534141185 0.04129981994628906 3 0.9923569575157085 14.10757064094994 7457.0 10.831641359704141 0.0 - - - - - - - 257.0 14 3 PML;LOC652346 promyelocytic leukemia;probable transcription factor PML-like 2489 313 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1772.[MT7]-AEGVSTPLAGR.2b4_1.heavy 601.336 / 501.279 6429.0 23.04765033721924 45 20 10 5 10 8.117933874429456 12.31840534141185 0.04129981994628906 3 0.9923569575157085 14.10757064094994 6429.0 7.855584062196307 1.0 - - - - - - - 257.0 12 5 PML;LOC652346 promyelocytic leukemia;probable transcription factor PML-like 2491 313 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1772.[MT7]-AEGVSTPLAGR.2y9_1.heavy 601.336 / 857.484 9258.0 23.04765033721924 45 20 10 5 10 8.117933874429456 12.31840534141185 0.04129981994628906 3 0.9923569575157085 14.10757064094994 9258.0 14.900459308362315 0.0 - - - - - - - 1102.4285714285713 18 7 PML;LOC652346 promyelocytic leukemia;probable transcription factor PML-like 2493 313 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1772.[MT7]-AEGVSTPLAGR.2y7_1.heavy 601.336 / 701.394 7715.0 23.04765033721924 45 20 10 5 10 8.117933874429456 12.31840534141185 0.04129981994628906 3 0.9923569575157085 14.10757064094994 7715.0 13.149188499783833 0.0 - - - - - - - 550.7142857142857 15 7 PML;LOC652346 promyelocytic leukemia;probable transcription factor PML-like 2495 314 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1601.[MT7]-TLFVK[MT7].2b3_1.heavy 448.296 / 506.31 12859.0 28.027099609375 50 20 10 10 10 7.137584197151924 14.010342608624152 0.0 3 0.995615123008203 18.630514163998566 12859.0 24.443801820020223 0.0 - - - - - - - 330.0 25 5 NCL;ORC1 nucleolin;origin recognition complex, subunit 1 2497 314 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1601.[MT7]-TLFVK[MT7].2y4_1.heavy 448.296 / 650.436 28686.0 28.027099609375 50 20 10 10 10 7.137584197151924 14.010342608624152 0.0 3 0.995615123008203 18.630514163998566 28686.0 129.49934393709478 0.0 - - - - - - - 330.0 57 4 NCL;ORC1 nucleolin;origin recognition complex, subunit 1 2499 314 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1601.[MT7]-TLFVK[MT7].2b4_1.heavy 448.296 / 605.378 5276.0 28.027099609375 50 20 10 10 10 7.137584197151924 14.010342608624152 0.0 3 0.995615123008203 18.630514163998566 5276.0 19.82998106443607 1.0 - - - - - - - 330.0 17 2 NCL;ORC1 nucleolin;origin recognition complex, subunit 1 2501 314 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1601.[MT7]-TLFVK[MT7].2y3_1.heavy 448.296 / 537.352 42534.0 28.027099609375 50 20 10 10 10 7.137584197151924 14.010342608624152 0.0 3 0.995615123008203 18.630514163998566 42534.0 98.08550501648637 0.0 - - - - - - - 706.1428571428571 85 7 NCL;ORC1 nucleolin;origin recognition complex, subunit 1 2503 315 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1773.[MT7]-QTLLALEK[MT7].2y4_1.heavy 602.381 / 604.379 19333.0 30.513999938964844 44 14 10 10 10 1.8205246836270375 43.91753472893625 0.0 3 0.937795134866865 4.922353516512888 19333.0 29.074651673665265 0.0 - - - - - - - 333.0 38 5 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 2505 315 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1773.[MT7]-QTLLALEK[MT7].2b4_1.heavy 602.381 / 600.384 17333.0 30.513999938964844 44 14 10 10 10 1.8205246836270375 43.91753472893625 0.0 3 0.937795134866865 4.922353516512888 17333.0 26.933527228554286 0.0 - - - - - - - 333.0 34 4 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 2507 315 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1773.[MT7]-QTLLALEK[MT7].2y3_1.heavy 602.381 / 533.341 14667.0 30.513999938964844 44 14 10 10 10 1.8205246836270375 43.91753472893625 0.0 3 0.937795134866865 4.922353516512888 14667.0 27.709151003382534 0.0 - - - - - - - 333.0 29 3 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 2509 315 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1773.[MT7]-QTLLALEK[MT7].2y7_1.heavy 602.381 / 931.594 24667.0 30.513999938964844 44 14 10 10 10 1.8205246836270375 43.91753472893625 0.0 3 0.937795134866865 4.922353516512888 24667.0 91.21123256756758 0.0 - - - - - - - 333.0 49 3 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 2511 316 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1602.[MT7]-NVVGGRR.2y5_1.heavy 451.276 / 544.331 9999.0 14.22700023651123 37 11 8 10 8 1.0558098156278293 61.70131945612964 0.0 4 0.8505442278417732 3.151682143382688 9999.0 22.965863718448876 0.0 - - - - - - - 263.3125 19 16 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 2513 316 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1602.[MT7]-NVVGGRR.2b6_1.heavy 451.276 / 727.433 15781.0 14.22700023651123 37 11 8 10 8 1.0558098156278293 61.70131945612964 0.0 4 0.8505442278417732 3.151682143382688 15781.0 81.19684647302904 0.0 - - - - - - - 247.8235294117647 31 17 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 2515 316 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1602.[MT7]-NVVGGRR.2y6_1.heavy 451.276 / 643.4 5180.0 14.22700023651123 37 11 8 10 8 1.0558098156278293 61.70131945612964 0.0 4 0.8505442278417732 3.151682143382688 5180.0 18.919521374119462 1.0 - - - - - - - 200.53333333333333 11 15 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 2517 316 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1602.[MT7]-NVVGGRR.2y1_1.heavy 451.276 / 175.119 N/A 14.22700023651123 37 11 8 10 8 1.0558098156278293 61.70131945612964 0.0 4 0.8505442278417732 3.151682143382688 29755.0 5.804436660313354 2.0 - - - - - - - 421.5 82 4 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 2519 317 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 CH10_ECO24.SAGGIVLTGSAAAK.2y7.peptide 601.84 / 605.33 513747.0 24.420700073242188 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 513747.0 1827.2160534245866 0.0 - - - - - - - 2811.0 1027 1 2521 317 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 CH10_ECO24.SAGGIVLTGSAAAK.2y8.peptide 601.84 / 718.41 747983.0 24.420700073242188 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 747983.0 866.5104174594254 0.0 - - - - - - - 6184.0 1495 1 2523 317 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 CH10_ECO24.SAGGIVLTGSAAAK.2y9.peptide 601.84 / 817.48 699111.0 24.420700073242188 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 699111.0 1206.5167178340375 0.0 - - - - - - - 6746.0 1398 1 2525 318 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1603.[MT7]-VSIAVLR.2y4_1.heavy 451.301 / 458.309 26333.0 30.682950019836426 45 20 10 5 10 4.091945535634035 24.438252935960765 0.04849815368652344 3 0.9900854269859618 12.38414099004301 26333.0 156.969984984985 0.0 - - - - - - - 333.0 52 2 MAP2K2 mitogen-activated protein kinase kinase 2 2527 318 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1603.[MT7]-VSIAVLR.2b4_1.heavy 451.301 / 515.331 50667.0 30.682950019836426 45 20 10 5 10 4.091945535634035 24.438252935960765 0.04849815368652344 3 0.9900854269859618 12.38414099004301 50667.0 181.533927027027 0.0 - - - - - - - 333.0 101 7 MAP2K2 mitogen-activated protein kinase kinase 2 2529 318 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1603.[MT7]-VSIAVLR.2y6_1.heavy 451.301 / 658.425 156000.0 30.682950019836426 45 20 10 5 10 4.091945535634035 24.438252935960765 0.04849815368652344 3 0.9900854269859618 12.38414099004301 156000.0 271.85896474118533 0.0 - - - - - - - 333.0 312 3 MAP2K2 mitogen-activated protein kinase kinase 2 2531 318 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1603.[MT7]-VSIAVLR.2b5_1.heavy 451.301 / 614.399 33000.0 30.682950019836426 45 20 10 5 10 4.091945535634035 24.438252935960765 0.04849815368652344 3 0.9900854269859618 12.38414099004301 33000.0 114.13933429530309 0.0 - - - - - - - 333.0 66 5 MAP2K2 mitogen-activated protein kinase kinase 2 2533 319 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1870.[MT7]-LRELMGELQR.2b8_1.heavy 694.894 / 1086.61 1573.0 32.65760040283203 45 15 10 10 10 2.1152283071161877 38.455811438851725 0.0 3 0.9562394415308026 5.877928959876924 1573.0 1.8497405082051144 1.0 - - - - - - - 315.0 3 3 TRIM32 tripartite motif-containing 32 2535 319 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1870.[MT7]-LRELMGELQR.2y8_1.heavy 694.894 / 975.493 4090.0 32.65760040283203 45 15 10 10 10 2.1152283071161877 38.455811438851725 0.0 3 0.9562394415308026 5.877928959876924 4090.0 13.248210922787194 0.0 - - - - - - - 315.0 8 3 TRIM32 tripartite motif-containing 32 2537 319 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1870.[MT7]-LRELMGELQR.2b7_1.heavy 694.894 / 973.526 3775.0 32.65760040283203 45 15 10 10 10 2.1152283071161877 38.455811438851725 0.0 3 0.9562394415308026 5.877928959876924 3775.0 23.944285714285716 0.0 - - - - - - - 315.0 7 3 TRIM32 tripartite motif-containing 32 2539 319 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1870.[MT7]-LRELMGELQR.2y7_1.heavy 694.894 / 846.45 1888.0 32.65760040283203 45 15 10 10 10 2.1152283071161877 38.455811438851725 0.0 3 0.9562394415308026 5.877928959876924 1888.0 7.398404360663184 3.0 - - - - - - - 315.0 3 5 TRIM32 tripartite motif-containing 32 2541 320 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1604.[MT7]-LQLIK[MT7].2y4_1.heavy 451.817 / 645.442 25333.0 29.22942543029785 39 14 10 5 10 2.0975098267865415 37.760790405988025 0.04830169677734375 3 0.9496429715044995 5.476369938383835 25333.0 73.2523590285938 2.0 - - - - - - - 333.0 50 1 YWHAQ;WWC3 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;WWC family member 3 2543 320 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1604.[MT7]-LQLIK[MT7].2b3_1.heavy 451.817 / 499.336 12667.0 29.22942543029785 39 14 10 5 10 2.0975098267865415 37.760790405988025 0.04830169677734375 3 0.9496429715044995 5.476369938383835 12667.0 17.36334945674061 1.0 - - - - - - - 333.0 25 5 YWHAQ;WWC3 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;WWC family member 3 2545 320 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1604.[MT7]-LQLIK[MT7].2b4_1.heavy 451.817 / 612.42 4667.0 29.22942543029785 39 14 10 5 10 2.0975098267865415 37.760790405988025 0.04830169677734375 3 0.9496429715044995 5.476369938383835 4667.0 1.4468680168016799 1.0 - - - - - - - 333.0 9 3 YWHAQ;WWC3 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;WWC family member 3 2547 320 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1604.[MT7]-LQLIK[MT7].2y3_1.heavy 451.817 / 517.383 16333.0 29.22942543029785 39 14 10 5 10 2.0975098267865415 37.760790405988025 0.04830169677734375 3 0.9496429715044995 5.476369938383835 16333.0 20.007924999999997 0.0 - - - - - - - 333.0 32 1 YWHAQ;WWC3 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;WWC family member 3 2549 321 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1871.[MT7]-RIYWVDLER.3b4_1.heavy 465.262 / 763.437 16939.0 32.898399353027344 50 20 10 10 10 7.6219733183547 13.119961960400339 0.0 3 0.990284063518377 12.510301512278586 16939.0 44.92700634907722 0.0 - - - - - - - 731.6666666666666 33 3 EGF epidermal growth factor 2551 321 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1871.[MT7]-RIYWVDLER.3b3_1.heavy 465.262 / 577.358 23213.0 32.898399353027344 50 20 10 10 10 7.6219733183547 13.119961960400339 0.0 3 0.990284063518377 12.510301512278586 23213.0 97.60845191116647 0.0 - - - - - - - 314.0 46 1 EGF epidermal growth factor 2553 321 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1871.[MT7]-RIYWVDLER.3y4_1.heavy 465.262 / 532.273 81872.0 32.898399353027344 50 20 10 10 10 7.6219733183547 13.119961960400339 0.0 3 0.990284063518377 12.510301512278586 81872.0 170.53041445270986 0.0 - - - - - - - 314.0 163 3 EGF epidermal growth factor 2555 321 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1871.[MT7]-RIYWVDLER.3y5_1.heavy 465.262 / 631.341 35447.0 32.898399353027344 50 20 10 10 10 7.6219733183547 13.119961960400339 0.0 3 0.990284063518377 12.510301512278586 35447.0 13.36799387610779 1.0 - - - - - - - 314.0 72 6 EGF epidermal growth factor 2557 322 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1605.[MT7]-LTIPC[CAM]R.2y4_1.heavy 452.264 / 545.286 11511.0 25.953750610351562 38 15 10 5 8 4.496130851545618 22.24134557063066 0.045299530029296875 4 0.9542518677567049 5.747856823477472 11511.0 23.427227722772276 1.0 - - - - - - - 303.0 23 2 PIAS1;PIAS2 protein inhibitor of activated STAT, 1;protein inhibitor of activated STAT, 2 2559 322 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1605.[MT7]-LTIPC[CAM]R.2b3_1.heavy 452.264 / 472.325 20296.0 25.953750610351562 38 15 10 5 8 4.496130851545618 22.24134557063066 0.045299530029296875 4 0.9542518677567049 5.747856823477472 20296.0 66.31454783154372 0.0 - - - - - - - 303.0 40 6 PIAS1;PIAS2 protein inhibitor of activated STAT, 1;protein inhibitor of activated STAT, 2 2561 322 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1605.[MT7]-LTIPC[CAM]R.2y5_1.heavy 452.264 / 646.334 61495.0 25.953750610351562 38 15 10 5 8 4.496130851545618 22.24134557063066 0.045299530029296875 4 0.9542518677567049 5.747856823477472 61495.0 55.18908809112753 0.0 - - - - - - - 303.0 122 2 PIAS1;PIAS2 protein inhibitor of activated STAT, 1;protein inhibitor of activated STAT, 2 2563 322 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1605.[MT7]-LTIPC[CAM]R.2y1_1.heavy 452.264 / 175.119 8482.0 25.953750610351562 38 15 10 5 8 4.496130851545618 22.24134557063066 0.045299530029296875 4 0.9542518677567049 5.747856823477472 8482.0 6.11938904591775 3.0 - - - - - - - 303.0 16 1 PIAS1;PIAS2 protein inhibitor of activated STAT, 1;protein inhibitor of activated STAT, 2 2565 323 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1872.[MT7]-NLQEILHGAVR.2b3_1.heavy 697.405 / 500.295 N/A N/A - - - - - - - - - 0.0 - - - - - - - EGFR epidermal growth factor receptor 2567 323 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1872.[MT7]-NLQEILHGAVR.2y5_1.heavy 697.405 / 539.305 N/A N/A - - - - - - - - - 0.0 - - - - - - - EGFR epidermal growth factor receptor 2569 323 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1872.[MT7]-NLQEILHGAVR.2b4_1.heavy 697.405 / 629.338 N/A N/A - - - - - - - - - 0.0 - - - - - - - EGFR epidermal growth factor receptor 2571 323 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1872.[MT7]-NLQEILHGAVR.2y10_1.heavy 697.405 / 1135.66 N/A N/A - - - - - - - - - 0.0 - - - - - - - EGFR epidermal growth factor receptor 2573 324 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1606.[MT7]-FILPK[MT7].2y4_1.heavy 453.307 / 614.436 25785.0 31.38759994506836 36 10 10 10 6 1.0508969744131753 61.37478777680378 0.0 5 0.8356799593179479 3.0018046902896387 25785.0 19.302398823191968 1.0 - - - - - - - 331.0 54 2 LOC100286979;ANAPC1 anaphase-promoting complex subunit 1-like;anaphase promoting complex subunit 1 2575 324 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1606.[MT7]-FILPK[MT7].2b3_1.heavy 453.307 / 518.346 N/A 31.38759994506836 36 10 10 10 6 1.0508969744131753 61.37478777680378 0.0 5 0.8356799593179479 3.0018046902896387 661.0 0.44707513128625725 23.0 - - - - - - - 331.0 25 6 LOC100286979;ANAPC1 anaphase-promoting complex subunit 1-like;anaphase promoting complex subunit 1 2577 324 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1606.[MT7]-FILPK[MT7].2y3_1.heavy 453.307 / 501.352 141488.0 31.38759994506836 36 10 10 10 6 1.0508969744131753 61.37478777680378 0.0 5 0.8356799593179479 3.0018046902896387 141488.0 30.606208592938337 1.0 - - - - - - - 1322.0 302 2 LOC100286979;ANAPC1 anaphase-promoting complex subunit 1-like;anaphase promoting complex subunit 1 2579 324 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1606.[MT7]-FILPK[MT7].2y1_1.heavy 453.307 / 291.215 34380.0 31.38759994506836 36 10 10 10 6 1.0508969744131753 61.37478777680378 0.0 5 0.8356799593179479 3.0018046902896387 34380.0 6.731436976908231 0.0 - - - - - - - 826.5 68 2 LOC100286979;ANAPC1 anaphase-promoting complex subunit 1-like;anaphase promoting complex subunit 1 2581 325 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1778.[MT7]-QQLLVSLK[MT7].2y4_1.heavy 608.897 / 590.399 13478.0 31.38759994506836 43 15 10 10 8 1.83160222279099 45.37382034132578 0.0 4 0.9540955342057472 5.737984909794275 13478.0 26.15069515270695 2.0 - - - - - - - 329.0 35 4 ANAPC2;LOC650621 anaphase promoting complex subunit 2;anaphase-promoting complex subunit 2-like 2583 325 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1778.[MT7]-QQLLVSLK[MT7].2b3_1.heavy 608.897 / 514.311 16107.0 31.38759994506836 43 15 10 10 8 1.83160222279099 45.37382034132578 0.0 4 0.9540955342057472 5.737984909794275 16107.0 24.760209385905515 0.0 - - - - - - - 329.0 32 1 ANAPC2;LOC650621 anaphase promoting complex subunit 2;anaphase-promoting complex subunit 2-like 2585 325 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1778.[MT7]-QQLLVSLK[MT7].2y5_1.heavy 608.897 / 703.483 14464.0 31.38759994506836 43 15 10 10 8 1.83160222279099 45.37382034132578 0.0 4 0.9540955342057472 5.737984909794275 14464.0 54.96867537624 0.0 - - - - - - - 329.0 28 4 ANAPC2;LOC650621 anaphase promoting complex subunit 2;anaphase-promoting complex subunit 2-like 2587 325 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1778.[MT7]-QQLLVSLK[MT7].2y6_1.heavy 608.897 / 816.568 7561.0 31.38759994506836 43 15 10 10 8 1.83160222279099 45.37382034132578 0.0 4 0.9540955342057472 5.737984909794275 7561.0 3.860568788904807 1.0 - - - - - - - 329.0 18 4 ANAPC2;LOC650621 anaphase promoting complex subunit 2;anaphase-promoting complex subunit 2-like 2589 326 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1873.[MT7]-M[OXI]DSSIQPGPFR.2y8_1.heavy 697.846 / 901.489 6816.0 25.484500885009766 47 17 10 10 10 2.71254384020854 36.86576361188397 0.0 3 0.9708070721718106 7.205453422603227 6816.0 27.455017447827576 0.0 - - - - - - - 296.0 13 6 RHOBTB2 Rho-related BTB domain containing 2 2591 326 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1873.[MT7]-M[OXI]DSSIQPGPFR.2y9_1.heavy 697.846 / 988.521 11261.0 25.484500885009766 47 17 10 10 10 2.71254384020854 36.86576361188397 0.0 3 0.9708070721718106 7.205453422603227 11261.0 48.55627964156507 0.0 - - - - - - - 296.0 22 3 RHOBTB2 Rho-related BTB domain containing 2 2593 326 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1873.[MT7]-M[OXI]DSSIQPGPFR.2y10_1.heavy 697.846 / 1103.55 12150.0 25.484500885009766 47 17 10 10 10 2.71254384020854 36.86576361188397 0.0 3 0.9708070721718106 7.205453422603227 12150.0 49.22906886650563 0.0 - - - - - - - 296.0 24 7 RHOBTB2 Rho-related BTB domain containing 2 2595 326 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1873.[MT7]-M[OXI]DSSIQPGPFR.2y7_1.heavy 697.846 / 814.457 2074.0 25.484500885009766 47 17 10 10 10 2.71254384020854 36.86576361188397 0.0 3 0.9708070721718106 7.205453422603227 2074.0 2.597976391231029 2.0 - - - - - - - 296.0 4 5 RHOBTB2 Rho-related BTB domain containing 2 2597 327 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1607.[MT7]-AEAAEK[MT7].2y5_1.heavy 453.76 / 691.374 53582.0 14.042699813842773 41 13 10 10 8 1.164547811005136 51.59197558371102 0.0 4 0.9186366851016409 4.296931991947681 53582.0 196.58847928440082 0.0 - - - - - - - 311.4 107 10 LIG1;KIAA1211;MYH14;CALD1 ligase I, DNA, ATP-dependent;KIAA1211;myosin, heavy chain 14, non-muscle;caldesmon 1 2599 327 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1607.[MT7]-AEAAEK[MT7].2y3_1.heavy 453.76 / 491.295 33795.0 14.042699813842773 41 13 10 10 8 1.164547811005136 51.59197558371102 0.0 4 0.9186366851016409 4.296931991947681 33795.0 90.37508081523328 0.0 - - - - - - - 682.8571428571429 67 7 LIG1;KIAA1211;MYH14;CALD1 ligase I, DNA, ATP-dependent;KIAA1211;myosin, heavy chain 14, non-muscle;caldesmon 1 2601 327 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1607.[MT7]-AEAAEK[MT7].2b5_1.heavy 453.76 / 616.306 26235.0 14.042699813842773 41 13 10 10 8 1.164547811005136 51.59197558371102 0.0 4 0.9186366851016409 4.296931991947681 26235.0 30.348971722365036 0.0 - - - - - - - 680.875 52 8 LIG1;KIAA1211;MYH14;CALD1 ligase I, DNA, ATP-dependent;KIAA1211;myosin, heavy chain 14, non-muscle;caldesmon 1 2603 327 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1607.[MT7]-AEAAEK[MT7].2y1_1.heavy 453.76 / 291.215 42243.0 14.042699813842773 41 13 10 10 8 1.164547811005136 51.59197558371102 0.0 4 0.9186366851016409 4.296931991947681 42243.0 20.017307856205363 1.0 - - - - - - - 1195.25 107 8 LIG1;KIAA1211;MYH14;CALD1 ligase I, DNA, ATP-dependent;KIAA1211;myosin, heavy chain 14, non-muscle;caldesmon 1 2605 328 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1779.[MT7]-LLASINSTVR.2y8_1.heavy 609.37 / 847.463 10060.0 31.677000045776367 36 18 0 10 8 4.2301283856971414 23.63994443717566 0.0 4 0.9899776303031432 12.317250402926005 10060.0 37.0010544032239 0.0 - - - - - - - 325.0 20 5 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 2607 328 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1779.[MT7]-LLASINSTVR.2y5_1.heavy 609.37 / 576.31 3570.0 31.677000045776367 36 18 0 10 8 4.2301283856971414 23.63994443717566 0.0 4 0.9899776303031432 12.317250402926005 3570.0 1.4661190965092399 2.0 - - - - - - - 741.8571428571429 10 7 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 2609 328 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1779.[MT7]-LLASINSTVR.2y9_1.heavy 609.37 / 960.547 12332.0 31.677000045776367 36 18 0 10 8 4.2301283856971414 23.63994443717566 0.0 4 0.9899776303031432 12.317250402926005 12332.0 72.85366153846154 1.0 - - - - - - - 325.0 112 6 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 2611 328 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1779.[MT7]-LLASINSTVR.2y7_1.heavy 609.37 / 776.426 5517.0 31.677000045776367 36 18 0 10 8 4.2301283856971414 23.63994443717566 0.0 4 0.9899776303031432 12.317250402926005 5517.0 23.607554912883728 0.0 - - - - - - - 325.0 11 6 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 2613 329 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1874.[MT7]-VWDLVAALDPR.2b3_1.heavy 699.897 / 545.284 15968.0 44.62119960784912 36 13 10 3 10 2.1355699425854087 46.8259072231256 0.07880020141601562 3 0.925498163528553 4.493088429227427 15968.0 25.49053714121905 0.0 - - - - - - - 207.8 31 5 BTRC beta-transducin repeat containing 2615 329 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1874.[MT7]-VWDLVAALDPR.2b4_1.heavy 699.897 / 658.368 12982.0 44.62119960784912 36 13 10 3 10 2.1355699425854087 46.8259072231256 0.07880020141601562 3 0.925498163528553 4.493088429227427 12982.0 19.402989214175655 1.0 - - - - - - - 259.6666666666667 25 9 BTRC beta-transducin repeat containing 2617 329 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1874.[MT7]-VWDLVAALDPR.2b6_1.heavy 699.897 / 828.474 6751.0 44.62119960784912 36 13 10 3 10 2.1355699425854087 46.8259072231256 0.07880020141601562 3 0.925498163528553 4.493088429227427 6751.0 19.78107985651633 0.0 - - - - - - - 216.44444444444446 13 9 BTRC beta-transducin repeat containing 2619 329 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1874.[MT7]-VWDLVAALDPR.2b5_1.heavy 699.897 / 757.437 10256.0 44.62119960784912 36 13 10 3 10 2.1355699425854087 46.8259072231256 0.07880020141601562 3 0.925498163528553 4.493088429227427 10256.0 37.17745979225172 0.0 - - - - - - - 367.5 20 6 BTRC beta-transducin repeat containing 2621 330 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1608.[MT7]-SQFLK[MT7].2y4_1.heavy 455.784 / 679.426 14824.0 23.603500366210938 48 18 10 10 10 10.640315460339187 9.398217597282802 0.0 3 0.9876592848281939 11.097996054534901 14824.0 60.051255358585614 1.0 - - - - - - - 265.0 29 3 MCM9;MCM2;MCM6;CD207;ZNF649 minichromosome maintenance complex component 9;minichromosome maintenance complex component 2;minichromosome maintenance complex component 6;CD207 molecule, langerin;zinc finger protein 649 2623 330 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1608.[MT7]-SQFLK[MT7].2b3_1.heavy 455.784 / 507.268 17206.0 23.603500366210938 48 18 10 10 10 10.640315460339187 9.398217597282802 0.0 3 0.9876592848281939 11.097996054534901 17206.0 69.27866166056748 0.0 - - - - - - - 265.0 34 2 MCM9;MCM2;MCM6;CD207;ZNF649 minichromosome maintenance complex component 9;minichromosome maintenance complex component 2;minichromosome maintenance complex component 6;CD207 molecule, langerin;zinc finger protein 649 2625 330 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1608.[MT7]-SQFLK[MT7].2b4_1.heavy 455.784 / 620.352 5294.0 23.603500366210938 48 18 10 10 10 10.640315460339187 9.398217597282802 0.0 3 0.9876592848281939 11.097996054534901 5294.0 7.8060491493383735 3.0 - - - - - - - 646.7777777777778 13 9 MCM9;MCM2;MCM6;CD207;ZNF649 minichromosome maintenance complex component 9;minichromosome maintenance complex component 2;minichromosome maintenance complex component 6;CD207 molecule, langerin;zinc finger protein 649 2627 330 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1608.[MT7]-SQFLK[MT7].2y3_1.heavy 455.784 / 551.367 29647.0 23.603500366210938 48 18 10 10 10 10.640315460339187 9.398217597282802 0.0 3 0.9876592848281939 11.097996054534901 29647.0 62.01062643741102 0.0 - - - - - - - 265.0 59 3 MCM9;MCM2;MCM6;CD207;ZNF649 minichromosome maintenance complex component 9;minichromosome maintenance complex component 2;minichromosome maintenance complex component 6;CD207 molecule, langerin;zinc finger protein 649 2629 331 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1609.[MT7]-AVAQATGR.2y5_1.heavy 459.268 / 532.284 4988.0 15.313400268554688 45 17 10 10 8 3.079245594486717 32.47548691115985 0.0 4 0.9735561838560547 7.572488070153092 4988.0 23.99591953623993 1.0 - - - - - - - 262.0 29 9 LIG1 ligase I, DNA, ATP-dependent 2631 331 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1609.[MT7]-AVAQATGR.2b4_1.heavy 459.268 / 514.311 5958.0 15.313400268554688 45 17 10 10 8 3.079245594486717 32.47548691115985 0.0 4 0.9735561838560547 7.572488070153092 5958.0 9.489531455920094 0.0 - - - - - - - 237.71428571428572 11 14 LIG1 ligase I, DNA, ATP-dependent 2633 331 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1609.[MT7]-AVAQATGR.2y6_1.heavy 459.268 / 603.321 19814.0 15.313400268554688 45 17 10 10 8 3.079245594486717 32.47548691115985 0.0 4 0.9735561838560547 7.572488070153092 19814.0 70.02887598512599 1.0 - - - - - - - 231.0 47 12 LIG1 ligase I, DNA, ATP-dependent 2635 331 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1609.[MT7]-AVAQATGR.2y7_1.heavy 459.268 / 702.389 28682.0 15.313400268554688 45 17 10 10 8 3.079245594486717 32.47548691115985 0.0 4 0.9735561838560547 7.572488070153092 28682.0 73.88003271213323 0.0 - - - - - - - 352.90909090909093 57 11 LIG1 ligase I, DNA, ATP-dependent 2637 332 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1876.[MT7]-DVLDVYIEHR.3b4_1.heavy 468.253 / 587.316 206529.0 32.31489944458008 50 20 10 10 10 9.802250544476719 10.20173882990035 0.0 3 0.9910702883363866 13.05028344345092 206529.0 416.5011994004268 0.0 - - - - - - - 318.0 413 1 MCM7 minichromosome maintenance complex component 7 2639 332 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1876.[MT7]-DVLDVYIEHR.3b3_1.heavy 468.253 / 472.289 34050.0 32.31489944458008 50 20 10 10 10 9.802250544476719 10.20173882990035 0.0 3 0.9910702883363866 13.05028344345092 34050.0 26.4023268096821 1.0 - - - - - - - 715.75 68 8 MCM7 minichromosome maintenance complex component 7 2641 332 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1876.[MT7]-DVLDVYIEHR.3y4_1.heavy 468.253 / 554.305 105333.0 32.31489944458008 50 20 10 10 10 9.802250544476719 10.20173882990035 0.0 3 0.9910702883363866 13.05028344345092 105333.0 154.7366492616579 0.0 - - - - - - - 318.0 210 2 MCM7 minichromosome maintenance complex component 7 2643 332 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1876.[MT7]-DVLDVYIEHR.3y5_1.heavy 468.253 / 717.368 58554.0 32.31489944458008 50 20 10 10 10 9.802250544476719 10.20173882990035 0.0 3 0.9910702883363866 13.05028344345092 58554.0 222.53366597993153 0.0 - - - - - - - 318.0 117 1 MCM7 minichromosome maintenance complex component 7 2645 333 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1780.[MT7]-LTGEVVALK[MT7].2y4_1.heavy 609.389 / 574.404 36333.0 30.173099517822266 42 12 10 10 10 1.1206757487252992 59.276367320781745 0.0 3 0.8993635097333906 3.8572105620914074 36333.0 21.845514312769545 0.0 - - - - - - - 667.0 72 5 CDK2 cyclin-dependent kinase 2 2647 333 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1780.[MT7]-LTGEVVALK[MT7].2y8_1.heavy 609.389 / 960.585 53333.0 30.173099517822266 42 12 10 10 10 1.1206757487252992 59.276367320781745 0.0 3 0.8993635097333906 3.8572105620914074 53333.0 177.22411756756756 0.0 - - - - - - - 333.0 106 6 CDK2 cyclin-dependent kinase 2 2649 333 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1780.[MT7]-LTGEVVALK[MT7].2b4_1.heavy 609.389 / 545.305 40000.0 30.173099517822266 42 12 10 10 10 1.1206757487252992 59.276367320781745 0.0 3 0.8993635097333906 3.8572105620914074 40000.0 36.436027137946084 0.0 - - - - - - - 333.0 80 3 CDK2 cyclin-dependent kinase 2 2651 333 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1780.[MT7]-LTGEVVALK[MT7].2b5_1.heavy 609.389 / 644.374 33667.0 30.173099517822266 42 12 10 10 10 1.1206757487252992 59.276367320781745 0.0 3 0.8993635097333906 3.8572105620914074 33667.0 37.673794058892646 0.0 - - - - - - - 333.0 67 3 CDK2 cyclin-dependent kinase 2 2653 334 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1787.[MT7]-DQQVLDVK[MT7].2b3_1.heavy 616.858 / 516.253 23153.0 24.09819984436035 41 11 10 10 10 0.9008373894582945 66.75852067243356 0.0 3 0.8678984038208288 3.357432011824991 23153.0 33.417566636446054 0.0 - - - - - - - 643.0 46 9 UBA2 ubiquitin-like modifier activating enzyme 2 2655 334 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1787.[MT7]-DQQVLDVK[MT7].2y5_1.heavy 616.858 / 717.463 9096.0 24.09819984436035 41 11 10 10 10 0.9008373894582945 66.75852067243356 0.0 3 0.8678984038208288 3.357432011824991 9096.0 8.908482605165752 0.0 - - - - - - - 661.4 18 10 UBA2 ubiquitin-like modifier activating enzyme 2 2657 334 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1787.[MT7]-DQQVLDVK[MT7].2b4_1.heavy 616.858 / 615.322 18743.0 24.09819984436035 41 11 10 10 10 0.9008373894582945 66.75852067243356 0.0 3 0.8678984038208288 3.357432011824991 18743.0 67.6571008182411 0.0 - - - - - - - 276.0 37 4 UBA2 ubiquitin-like modifier activating enzyme 2 2659 334 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1787.[MT7]-DQQVLDVK[MT7].2b6_1.heavy 616.858 / 843.433 36383.0 24.09819984436035 41 11 10 10 10 0.9008373894582945 66.75852067243356 0.0 3 0.8678984038208288 3.357432011824991 36383.0 29.579211606872573 0.0 - - - - - - - 276.0 72 1 UBA2 ubiquitin-like modifier activating enzyme 2 2661 335 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1788.[MT7]-MPEAEENK[MT7].2y4_1.heavy 618.313 / 663.343 3604.0 19.2096004486084 46 18 10 10 8 3.314506960607215 24.22360344123542 0.0 4 0.9874784558478806 11.017402388380404 3604.0 20.415670549084858 0.0 - - - - - - - 266.6666666666667 7 6 CCND1 cyclin D1 2663 335 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1788.[MT7]-MPEAEENK[MT7].2y3_1.heavy 618.313 / 534.3 3203.0 19.2096004486084 46 18 10 10 8 3.314506960607215 24.22360344123542 0.0 4 0.9874784558478806 11.017402388380404 3203.0 19.69045582362729 1.0 - - - - - - - 300.0 6 10 CCND1 cyclin D1 2665 335 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1788.[MT7]-MPEAEENK[MT7].2y6_1.heavy 618.313 / 863.423 2402.0 19.2096004486084 46 18 10 10 8 3.314506960607215 24.22360344123542 0.0 4 0.9874784558478806 11.017402388380404 2402.0 17.168295 0.0 - - - - - - - 233.33333333333334 4 6 CCND1 cyclin D1 2667 335 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1788.[MT7]-MPEAEENK[MT7].2y7_1.heavy 618.313 / 960.476 31633.0 19.2096004486084 46 18 10 10 8 3.314506960607215 24.22360344123542 0.0 4 0.9874784558478806 11.017402388380404 31633.0 78.33886808698787 0.0 - - - - - - - 325.0 63 8 CCND1 cyclin D1 2669 336 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1785.[MT7]-RAFEYEIR.2y4_1.heavy 614.334 / 580.309 3514.0 25.660499572753906 42 12 10 10 10 1.217350023332223 54.745760535715206 0.0 3 0.8951771561028575 3.7780321503150978 3514.0 0.19999999999999996 3.0 - - - - - - - 293.0 7 7 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 2671 336 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1785.[MT7]-RAFEYEIR.2b4_1.heavy 614.334 / 648.359 3807.0 25.660499572753906 42 12 10 10 10 1.217350023332223 54.745760535715206 0.0 3 0.8951771561028575 3.7780321503150978 3807.0 7.579351535836177 0.0 - - - - - - - 293.0 7 6 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 2673 336 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1785.[MT7]-RAFEYEIR.2b6_1.heavy 614.334 / 940.464 10835.0 25.660499572753906 42 12 10 10 10 1.217350023332223 54.745760535715206 0.0 3 0.8951771561028575 3.7780321503150978 10835.0 73.55226962457337 0.0 - - - - - - - 293.0 21 6 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 2675 336 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1785.[MT7]-RAFEYEIR.2y7_1.heavy 614.334 / 927.457 3807.0 25.660499572753906 42 12 10 10 10 1.217350023332223 54.745760535715206 0.0 3 0.8951771561028575 3.7780321503150978 3807.0 16.41470989761092 0.0 - - - - - - - 293.0 7 4 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 2677 337 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1888.[MT7]-SLQEEPVEGFR.3y6_1.heavy 478.916 / 704.373 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE2R2 ubiquitin-conjugating enzyme E2R 2 2679 337 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1888.[MT7]-SLQEEPVEGFR.3b5_1.heavy 478.916 / 731.369 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE2R2 ubiquitin-conjugating enzyme E2R 2 2681 337 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1888.[MT7]-SLQEEPVEGFR.3y4_1.heavy 478.916 / 508.251 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE2R2 ubiquitin-conjugating enzyme E2R 2 2683 337 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1888.[MT7]-SLQEEPVEGFR.3y5_1.heavy 478.916 / 607.32 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE2R2 ubiquitin-conjugating enzyme E2R 2 2685 338 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1786.[MT7]-AVEALQGEK[MT7].2y4_1.heavy 616.858 / 605.338 25542.0 22.520599365234375 43 13 10 10 10 2.2380627696080593 44.68149926711506 0.0 3 0.9254450359262109 4.491466818685037 25542.0 25.35186104218362 0.0 - - - - - - - 372.0 51 4 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 2687 338 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1786.[MT7]-AVEALQGEK[MT7].2y8_1.heavy 616.858 / 1017.57 27278.0 22.520599365234375 43 13 10 10 10 2.2380627696080593 44.68149926711506 0.0 3 0.9254450359262109 4.491466818685037 27278.0 125.39080645161289 0.0 - - - - - - - 372.0 54 8 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 2689 338 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1786.[MT7]-AVEALQGEK[MT7].2b4_1.heavy 616.858 / 515.295 36701.0 22.520599365234375 43 13 10 10 10 2.2380627696080593 44.68149926711506 0.0 3 0.9254450359262109 4.491466818685037 36701.0 60.39315860215054 0.0 - - - - - - - 372.0 73 4 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 2691 338 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1786.[MT7]-AVEALQGEK[MT7].2y6_1.heavy 616.858 / 789.459 29758.0 22.520599365234375 43 13 10 10 10 2.2380627696080593 44.68149926711506 0.0 3 0.9254450359262109 4.491466818685037 29758.0 145.19024193548387 0.0 - - - - - - - 248.0 59 4 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 2693 339 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1889.[MT7]-LAFC[CAM]DIC[CAM]QK[MT7].2y4_1.heavy 721.872 / 692.388 11667.0 30.658700942993164 48 18 10 10 10 4.165852845032317 24.00468852836405 0.0 3 0.9845797075340406 9.92559158288919 11667.0 12.044227886056971 1.0 - - - - - - - 333.0 23 2 RAF1 v-raf-1 murine leukemia viral oncogene homolog 1 2695 339 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1889.[MT7]-LAFC[CAM]DIC[CAM]QK[MT7].2y3_1.heavy 721.872 / 579.304 14333.0 30.658700942993164 48 18 10 10 10 4.165852845032317 24.00468852836405 0.0 3 0.9845797075340406 9.92559158288919 14333.0 29.6622206451163 0.0 - - - - - - - 333.0 28 4 RAF1 v-raf-1 murine leukemia viral oncogene homolog 1 2697 339 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1889.[MT7]-LAFC[CAM]DIC[CAM]QK[MT7].2b5_1.heavy 721.872 / 751.357 9000.0 30.658700942993164 48 18 10 10 10 4.165852845032317 24.00468852836405 0.0 3 0.9845797075340406 9.92559158288919 9000.0 39.30426678552616 0.0 - - - - - - - 333.0 18 6 RAF1 v-raf-1 murine leukemia viral oncogene homolog 1 2699 339 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1889.[MT7]-LAFC[CAM]DIC[CAM]QK[MT7].2y7_1.heavy 721.872 / 1114.51 10000.0 30.658700942993164 48 18 10 10 10 4.165852845032317 24.00468852836405 0.0 3 0.9845797075340406 9.92559158288919 10000.0 59.75975975975976 0.0 - - - - - - - 333.0 20 3 RAF1 v-raf-1 murine leukemia viral oncogene homolog 1 2701 340 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1783.[MT7]-TDATTAIIK[MT7].2y4_1.heavy 611.368 / 588.42 4865.0 23.74874973297119 28 17 0 5 6 3.7257072863436225 26.840541221943162 0.04170036315917969 5 0.9797651112002531 8.661176755698396 4865.0 6.98240932642487 4.0 - - - - - - - 688.2727272727273 83 11 HUWE1 HECT, UBA and WWE domain containing 1 2703 340 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1783.[MT7]-TDATTAIIK[MT7].2y5_1.heavy 611.368 / 689.468 8378.0 23.74874973297119 28 17 0 5 6 3.7257072863436225 26.840541221943162 0.04170036315917969 5 0.9797651112002531 8.661176755698396 8378.0 9.740768450715976 0.0 - - - - - - - 270.0 16 7 HUWE1 HECT, UBA and WWE domain containing 1 2705 340 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1783.[MT7]-TDATTAIIK[MT7].2b4_1.heavy 611.368 / 533.269 4594.0 23.74874973297119 28 17 0 5 6 3.7257072863436225 26.840541221943162 0.04170036315917969 5 0.9797651112002531 8.661176755698396 4594.0 4.921926907383845 2.0 - - - - - - - 270.0 9 3 HUWE1 HECT, UBA and WWE domain containing 1 2707 340 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1783.[MT7]-TDATTAIIK[MT7].2b6_1.heavy 611.368 / 705.354 7567.0 23.74874973297119 28 17 0 5 6 3.7257072863436225 26.840541221943162 0.04170036315917969 5 0.9797651112002531 8.661176755698396 7567.0 26.70488888888889 1.0 - - - - - - - 270.0 15 6 HUWE1 HECT, UBA and WWE domain containing 1 2709 341 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1781.[MT7]-LILTGAESK[MT7].2y8_1.heavy 610.379 / 962.564 31525.0 28.146699905395508 41 18 10 5 8 5.6018240677851905 17.851328208445018 0.04759979248046875 4 0.9861204852514669 10.463371109328383 31525.0 34.54493043419869 1.0 - - - - - - - 332.0 88 4 ANAPC5 anaphase promoting complex subunit 5 2711 341 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1781.[MT7]-LILTGAESK[MT7].2y5_1.heavy 610.379 / 635.348 33516.0 28.146699905395508 41 18 10 5 8 5.6018240677851905 17.851328208445018 0.04759979248046875 4 0.9861204852514669 10.463371109328383 33516.0 66.29963038492494 0.0 - - - - - - - 332.0 67 4 ANAPC5 anaphase promoting complex subunit 5 2713 341 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1781.[MT7]-LILTGAESK[MT7].2y6_1.heavy 610.379 / 736.396 41480.0 28.146699905395508 41 18 10 5 8 5.6018240677851905 17.851328208445018 0.04759979248046875 4 0.9861204852514669 10.463371109328383 41480.0 81.85201877593266 0.0 - - - - - - - 332.0 82 3 ANAPC5 anaphase promoting complex subunit 5 2715 341 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1781.[MT7]-LILTGAESK[MT7].2y7_1.heavy 610.379 / 849.48 30529.0 28.146699905395508 41 18 10 5 8 5.6018240677851905 17.851328208445018 0.04759979248046875 4 0.9861204852514669 10.463371109328383 30529.0 118.92823293172691 0.0 - - - - - - - 332.0 61 2 ANAPC5 anaphase promoting complex subunit 5 2717 342 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1782.[MT7]-FLSLEPVK[MT7].2y4_1.heavy 610.878 / 616.379 20523.0 34.48109817504883 50 20 10 10 10 18.686419732389187 5.351479921360747 0.0 3 0.9915095023394986 13.384064954507148 20523.0 23.237991465149356 0.0 - - - - - - - 281.0 41 4 CCND1 cyclin D1 2719 342 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1782.[MT7]-FLSLEPVK[MT7].2y6_1.heavy 610.878 / 816.495 19679.0 34.48109817504883 50 20 10 10 10 18.686419732389187 5.351479921360747 0.0 3 0.9915095023394986 13.384064954507148 19679.0 44.12017793594306 0.0 - - - - - - - 281.0 39 6 CCND1 cyclin D1 2721 342 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1782.[MT7]-FLSLEPVK[MT7].2b5_1.heavy 610.878 / 734.42 28395.0 34.48109817504883 50 20 10 10 10 18.686419732389187 5.351479921360747 0.0 3 0.9915095023394986 13.384064954507148 28395.0 66.78056448469447 0.0 - - - - - - - 281.0 56 6 CCND1 cyclin D1 2723 342 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1782.[MT7]-FLSLEPVK[MT7].2y7_1.heavy 610.878 / 929.579 17712.0 34.48109817504883 50 20 10 10 10 18.686419732389187 5.351479921360747 0.0 3 0.9915095023394986 13.384064954507148 17712.0 82.50892526690392 0.0 - - - - - - - 281.0 35 4 CCND1 cyclin D1 2725 343 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1882.[MT7]-FVTDIDELGK[MT7].2y4_1.heavy 712.897 / 590.363 37414.0 33.42129898071289 50 20 10 10 10 3.7543330419667513 21.15045250923129 0.0 3 0.9917081559383959 13.54366670306405 37414.0 38.56622686901249 0.0 - - - - - - - 711.125 74 8 CDK6 cyclin-dependent kinase 6 2727 343 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1882.[MT7]-FVTDIDELGK[MT7].2y8_1.heavy 712.897 / 1034.55 39210.0 33.42129898071289 50 20 10 10 10 3.7543330419667513 21.15045250923129 0.0 3 0.9917081559383959 13.54366670306405 39210.0 88.6117921108306 0.0 - - - - - - - 748.5 78 8 CDK6 cyclin-dependent kinase 6 2729 343 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1882.[MT7]-FVTDIDELGK[MT7].2b4_1.heavy 712.897 / 607.321 62256.0 33.42129898071289 50 20 10 10 10 3.7543330419667513 21.15045250923129 0.0 3 0.9917081559383959 13.54366670306405 62256.0 101.07072693270729 0.0 - - - - - - - 299.0 124 7 CDK6 cyclin-dependent kinase 6 2731 343 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1882.[MT7]-FVTDIDELGK[MT7].2y6_1.heavy 712.897 / 818.474 30230.0 33.42129898071289 50 20 10 10 10 3.7543330419667513 21.15045250923129 0.0 3 0.9917081559383959 13.54366670306405 30230.0 45.220701168614355 1.0 - - - - - - - 299.0 60 4 CDK6 cyclin-dependent kinase 6 2733 344 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 TPX_ECO57.DLSDVTLGQFAGK.2y7.peptide 675.85 / 720.4 562326.0 33.698699951171875 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 562326.0 131.21643360483992 0.0 - - - - - - - 290.0 1124 1 2735 344 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 TPX_ECO57.DLSDVTLGQFAGK.2y8.peptide 675.85 / 821.45 1174510.0 33.698699951171875 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 1174510.0 71.32971142600158 0.0 - - - - - - - 290.0 2349 2 2737 344 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 TPX_ECO57.DLSDVTLGQFAGK.2y6.peptide 675.85 / 607.32 1083500.0 33.698699951171875 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 1083500.0 118.54001041457269 0.0 - - - - - - - 290.0 2167 4 2739 345 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1883.[MT7]-FVTDIDELGK[MT7].3b6_1.heavy 475.601 / 835.432 10493.0 33.42129898071289 50 20 10 10 10 5.5749543246347555 17.937366689825126 0.0 3 0.9942329771737216 16.24342464474446 10493.0 69.95333333333333 0.0 - - - - - - - 300.0 20 1 CDK6 cyclin-dependent kinase 6 2741 345 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1883.[MT7]-FVTDIDELGK[MT7].3b4_1.heavy 475.601 / 607.321 32377.0 33.42129898071289 50 20 10 10 10 5.5749543246347555 17.937366689825126 0.0 3 0.9942329771737216 16.24342464474446 32377.0 134.9266694467612 0.0 - - - - - - - 300.0 64 6 CDK6 cyclin-dependent kinase 6 2743 345 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1883.[MT7]-FVTDIDELGK[MT7].3b5_1.heavy 475.601 / 720.405 7495.0 33.42129898071289 50 20 10 10 10 5.5749543246347555 17.937366689825126 0.0 3 0.9942329771737216 16.24342464474446 7495.0 15.832041156840933 0.0 - - - - - - - 300.0 14 1 CDK6 cyclin-dependent kinase 6 2745 345 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1883.[MT7]-FVTDIDELGK[MT7].3y5_1.heavy 475.601 / 705.39 5696.0 33.42129898071289 50 20 10 10 10 5.5749543246347555 17.937366689825126 0.0 3 0.9942329771737216 16.24342464474446 5696.0 17.562666666666665 0.0 - - - - - - - 300.0 11 3 CDK6 cyclin-dependent kinase 6 2747 346 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1886.[MT7]-AIQDPAFSDGIR.2y8_1.heavy 717.379 / 862.442 35000.0 28.95240020751953 46 16 10 10 10 3.7430947418377603 26.715861311835955 0.0 3 0.9676226425949231 6.840106697191923 35000.0 56.53090772693173 0.0 - - - - - - - 1190.2857142857142 70 7 HUWE1 HECT, UBA and WWE domain containing 1 2749 346 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1886.[MT7]-AIQDPAFSDGIR.2y5_1.heavy 717.379 / 547.284 2333.0 28.95240020751953 46 16 10 10 10 3.7430947418377603 26.715861311835955 0.0 3 0.9676226425949231 6.840106697191923 2333.0 7.706606606606607 6.0 - - - - - - - 333.0 11 5 HUWE1 HECT, UBA and WWE domain containing 1 2751 346 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1886.[MT7]-AIQDPAFSDGIR.2b4_1.heavy 717.379 / 572.316 29667.0 28.95240020751953 46 16 10 10 10 3.7430947418377603 26.715861311835955 0.0 3 0.9676226425949231 6.840106697191923 29667.0 41.72626037076725 0.0 - - - - - - - 333.0 59 7 HUWE1 HECT, UBA and WWE domain containing 1 2753 346 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1886.[MT7]-AIQDPAFSDGIR.2y10_1.heavy 717.379 / 1105.53 5667.0 28.95240020751953 46 16 10 10 10 3.7430947418377603 26.715861311835955 0.0 3 0.9676226425949231 6.840106697191923 5667.0 32.84477477477478 0.0 - - - - - - - 333.0 11 6 HUWE1 HECT, UBA and WWE domain containing 1 2755 347 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1887.[MT7]-SLQEEPVEGFR.2y8_1.heavy 717.871 / 962.458 19634.0 27.704200744628906 44 14 10 10 10 2.683154360007047 30.534873661982523 0.0 3 0.9398494913744037 5.0065826047284565 19634.0 38.1224455172994 0.0 - - - - - - - 327.0 39 3 UBE2R2 ubiquitin-conjugating enzyme E2R 2 2757 347 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1887.[MT7]-SLQEEPVEGFR.2y6_1.heavy 717.871 / 704.373 27488.0 27.704200744628906 44 14 10 10 10 2.683154360007047 30.534873661982523 0.0 3 0.9398494913744037 5.0065826047284565 27488.0 99.04747918021877 0.0 - - - - - - - 327.0 54 4 UBE2R2 ubiquitin-conjugating enzyme E2R 2 2759 347 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1887.[MT7]-SLQEEPVEGFR.2y10_1.heavy 717.871 / 1203.6 6545.0 27.704200744628906 44 14 10 10 10 2.683154360007047 30.534873661982523 0.0 3 0.9398494913744037 5.0065826047284565 6545.0 19.236767080471232 1.0 - - - - - - - 327.0 13 2 UBE2R2 ubiquitin-conjugating enzyme E2R 2 2761 347 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1887.[MT7]-SLQEEPVEGFR.2y7_1.heavy 717.871 / 833.415 13744.0 27.704200744628906 44 14 10 10 10 2.683154360007047 30.534873661982523 0.0 3 0.9398494913744037 5.0065826047284565 13744.0 4.84523465436116 1.0 - - - - - - - 327.0 28 2 UBE2R2 ubiquitin-conjugating enzyme E2R 2 2763 348 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1885.[MT7]-EALQDVEDENQ.2b4_1.heavy 717.329 / 586.332 10903.0 24.5447998046875 40 10 10 10 10 0.9169403238119029 79.0502949678429 0.0 3 0.8487583518260281 3.1325255618450667 10903.0 8.950152876476203 0.0 - - - - - - - 287.0 21 4 YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2765 348 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1885.[MT7]-EALQDVEDENQ.2b6_1.heavy 717.329 / 800.427 8034.0 24.5447998046875 40 10 10 10 10 0.9169403238119029 79.0502949678429 0.0 3 0.8487583518260281 3.1325255618450667 8034.0 13.009352455818027 1.0 - - - - - - - 287.0 21 4 YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2767 348 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1885.[MT7]-EALQDVEDENQ.2b7_1.heavy 717.329 / 929.47 13486.0 24.5447998046875 40 10 10 10 10 0.9169403238119029 79.0502949678429 0.0 3 0.8487583518260281 3.1325255618450667 13486.0 65.78536585365853 0.0 - - - - - - - 287.0 26 7 YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2769 348 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1885.[MT7]-EALQDVEDENQ.2b5_1.heavy 717.329 / 701.359 17790.0 24.5447998046875 40 10 10 10 10 0.9169403238119029 79.0502949678429 0.0 3 0.8487583518260281 3.1325255618450667 17790.0 26.654006968641113 0.0 - - - - - - - 717.5 35 8 YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2771 349 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2000.[MT7]-SLEQNIQLPAALLSR.2y9_1.heavy 899.021 / 968.589 N/A N/A - - - - - - - - - 0.0 - - - - - - - MCM7 minichromosome maintenance complex component 7 2773 349 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2000.[MT7]-SLEQNIQLPAALLSR.2b6_1.heavy 899.021 / 829.454 N/A N/A - - - - - - - - - 0.0 - - - - - - - MCM7 minichromosome maintenance complex component 7 2775 349 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2000.[MT7]-SLEQNIQLPAALLSR.2b5_1.heavy 899.021 / 716.37 N/A N/A - - - - - - - - - 0.0 - - - - - - - MCM7 minichromosome maintenance complex component 7 2777 349 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2000.[MT7]-SLEQNIQLPAALLSR.2y7_1.heavy 899.021 / 727.446 N/A N/A - - - - - - - - - 0.0 - - - - - - - MCM7 minichromosome maintenance complex component 7 2779 350 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1791.[MT7]-LFDVC[CAM]TVSR.2b3_1.heavy 620.827 / 520.289 42847.0 32.1151008605957 50 20 10 10 10 11.440728721170332 8.74070196376184 0.0 3 0.997049745804396 22.71568409579263 42847.0 32.20460754558718 1.0 - - - - - - - 317.0 93 2 CDK6 cyclin-dependent kinase 6 2781 350 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1791.[MT7]-LFDVC[CAM]TVSR.2y8_1.heavy 620.827 / 983.461 52051.0 32.1151008605957 50 20 10 10 10 11.440728721170332 8.74070196376184 0.0 3 0.997049745804396 22.71568409579263 52051.0 179.26529157448434 0.0 - - - - - - - 317.0 104 5 CDK6 cyclin-dependent kinase 6 2783 350 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1791.[MT7]-LFDVC[CAM]TVSR.2y6_1.heavy 620.827 / 721.366 43164.0 32.1151008605957 50 20 10 10 10 11.440728721170332 8.74070196376184 0.0 3 0.997049745804396 22.71568409579263 43164.0 51.45848419598872 0.0 - - - - - - - 705.4444444444445 86 9 CDK6 cyclin-dependent kinase 6 2785 350 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1791.[MT7]-LFDVC[CAM]TVSR.2y7_1.heavy 620.827 / 836.393 23486.0 32.1151008605957 50 20 10 10 10 11.440728721170332 8.74070196376184 0.0 3 0.997049745804396 22.71568409579263 23486.0 45.393109243697474 0.0 - - - - - - - 793.5 46 6 CDK6 cyclin-dependent kinase 6 2787 351 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1790.[MT7]-DIFDQLAK[MT7].2y4_1.heavy 619.355 / 603.395 42076.0 34.06869888305664 46 16 10 10 10 2.735164355814659 28.948417479787313 0.0 3 0.9669941811588215 6.774313624594983 42076.0 153.05666897740102 0.0 - - - - - - - 290.0 84 3 MCM3 minichromosome maintenance complex component 3 2789 351 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1790.[MT7]-DIFDQLAK[MT7].2b4_1.heavy 619.355 / 635.316 54553.0 34.06869888305664 46 16 10 10 10 2.735164355814659 28.948417479787313 0.0 3 0.9669941811588215 6.774313624594983 54553.0 114.03456516959098 0.0 - - - - - - - 290.0 109 4 MCM3 minichromosome maintenance complex component 3 2791 351 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1790.[MT7]-DIFDQLAK[MT7].2y6_1.heavy 619.355 / 865.49 25826.0 34.06869888305664 46 16 10 10 10 2.735164355814659 28.948417479787313 0.0 3 0.9669941811588215 6.774313624594983 25826.0 82.82131034482758 0.0 - - - - - - - 290.0 51 5 MCM3 minichromosome maintenance complex component 3 2793 351 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1790.[MT7]-DIFDQLAK[MT7].2b5_1.heavy 619.355 / 763.374 17120.0 34.06869888305664 46 16 10 10 10 2.735164355814659 28.948417479787313 0.0 3 0.9669941811588215 6.774313624594983 17120.0 32.31795291085815 0.0 - - - - - - - 290.0 34 7 MCM3 minichromosome maintenance complex component 3 2795 352 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1620.[MT7]-DAQQDAR.2y6_1.heavy 474.237 / 688.337 8753.0 12.17805004119873 42 14 10 8 10 3.7138189563680553 26.92646065272805 0.012500762939453125 3 0.9354708749586876 4.831933673214196 8753.0 7.067357027511267 1.0 - - - - - - - 108.0327868852459 17 61 SMC3 structural maintenance of chromosomes 3 2797 352 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1620.[MT7]-DAQQDAR.2b5_1.heavy 474.237 / 702.318 26759.0 12.17805004119873 42 14 10 8 10 3.7138189563680553 26.92646065272805 0.012500762939453125 3 0.9354708749586876 4.831933673214196 26759.0 45.611931818181816 1.0 - - - - - - - 633.55 53 20 SMC3 structural maintenance of chromosomes 3 2799 352 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1620.[MT7]-DAQQDAR.2y5_1.heavy 474.237 / 617.3 1723.0 12.17805004119873 42 14 10 8 10 3.7138189563680553 26.92646065272805 0.012500762939453125 3 0.9354708749586876 4.831933673214196 1723.0 3.534358974358975 3.0 - - - - - - - 84.47169811320755 5 53 SMC3 structural maintenance of chromosomes 3 2801 352 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1620.[MT7]-DAQQDAR.2b4_1.heavy 474.237 / 587.291 2834.0 12.17805004119873 42 14 10 8 10 3.7138189563680553 26.92646065272805 0.012500762939453125 3 0.9354708749586876 4.831933673214196 2834.0 9.89103117505995 1.0 - - - - - - - 94.05172413793103 5 58 SMC3 structural maintenance of chromosomes 3 2803 353 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6980.[MT7]-LLQFVTGTSR.2y8_1.heavy 633.37 / 895.463 8252.0 36.773799896240234 34 14 2 10 8 1.4604185770571734 46.468950090168505 0.0 4 0.9384806607978525 4.949992420264657 8252.0 48.158672 0.0 - - - - - - - 250.0 16 5 NEDD4L;NEDD4 neural precursor cell expressed, developmentally down-regulated 4-like;neural precursor cell expressed, developmentally down-regulated 4 2805 353 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6980.[MT7]-LLQFVTGTSR.2y9_1.heavy 633.37 / 1008.55 13004.0 36.773799896240234 34 14 2 10 8 1.4604185770571734 46.468950090168505 0.0 4 0.9384806607978525 4.949992420264657 13004.0 45.253919999999994 0.0 - - - - - - - 250.0 26 6 NEDD4L;NEDD4 neural precursor cell expressed, developmentally down-regulated 4-like;neural precursor cell expressed, developmentally down-regulated 4 2807 353 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6980.[MT7]-LLQFVTGTSR.2y6_1.heavy 633.37 / 620.336 7752.0 36.773799896240234 34 14 2 10 8 1.4604185770571734 46.468950090168505 0.0 4 0.9384806607978525 4.949992420264657 7752.0 17.054399999999998 1.0 - - - - - - - 535.7142857142857 65 7 NEDD4L;NEDD4 neural precursor cell expressed, developmentally down-regulated 4-like;neural precursor cell expressed, developmentally down-regulated 4 2809 353 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6980.[MT7]-LLQFVTGTSR.2y7_1.heavy 633.37 / 767.405 16504.0 36.773799896240234 34 14 2 10 8 1.4604185770571734 46.468950090168505 0.0 4 0.9384806607978525 4.949992420264657 16504.0 38.81740800000001 1.0 - - - - - - - 250.0 87 2 NEDD4L;NEDD4 neural precursor cell expressed, developmentally down-regulated 4-like;neural precursor cell expressed, developmentally down-regulated 4 2811 354 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1622.[MT7]-HFSM[OXI]K[MT7].2y4_1.heavy 477.259 / 672.351 N/A N/A - - - - - - - - - 0.0 - - - - - - - TFDP1;TFDP2 transcription factor Dp-1;transcription factor Dp-2 (E2F dimerization partner 2) 2813 354 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1622.[MT7]-HFSM[OXI]K[MT7].2b3_1.heavy 477.259 / 516.269 N/A N/A - - - - - - - - - 0.0 - - - - - - - TFDP1;TFDP2 transcription factor Dp-1;transcription factor Dp-2 (E2F dimerization partner 2) 2815 354 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1622.[MT7]-HFSM[OXI]K[MT7].2y3_1.heavy 477.259 / 525.282 N/A N/A - - - - - - - - - 0.0 - - - - - - - TFDP1;TFDP2 transcription factor Dp-1;transcription factor Dp-2 (E2F dimerization partner 2) 2817 354 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1622.[MT7]-HFSM[OXI]K[MT7].2y1_1.heavy 477.259 / 291.215 N/A N/A - - - - - - - - - 0.0 - - - - - - - TFDP1;TFDP2 transcription factor Dp-1;transcription factor Dp-2 (E2F dimerization partner 2) 2819 355 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1750.[MT7]-ADLDGVGVK[MT7].2y5_1.heavy 581.34 / 603.395 33261.0 24.58650016784668 44 14 10 10 10 5.633357966523117 17.75140166740008 0.0 3 0.9495501898225657 5.471288753993562 33261.0 51.229446032071266 0.0 - - - - - - - 705.0 66 8 EGF epidermal growth factor 2821 355 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1750.[MT7]-ADLDGVGVK[MT7].2b4_1.heavy 581.34 / 559.284 33825.0 24.58650016784668 44 14 10 10 10 5.633357966523117 17.75140166740008 0.0 3 0.9495501898225657 5.471288753993562 33825.0 22.28621388748099 0.0 - - - - - - - 282.0 67 2 EGF epidermal growth factor 2823 355 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1750.[MT7]-ADLDGVGVK[MT7].2y6_1.heavy 581.34 / 718.422 11839.0 24.58650016784668 44 14 10 10 10 5.633357966523117 17.75140166740008 0.0 3 0.9495501898225657 5.471288753993562 11839.0 6.526583528554546 2.0 - - - - - - - 282.0 24 4 EGF epidermal growth factor 2825 355 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1750.[MT7]-ADLDGVGVK[MT7].2b5_1.heavy 581.34 / 616.306 7892.0 24.58650016784668 44 14 10 10 10 5.633357966523117 17.75140166740008 0.0 3 0.9495501898225657 5.471288753993562 7892.0 10.750207833129476 0.0 - - - - - - - 282.0 15 4 EGF epidermal growth factor 2827 356 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6983.[MT7]-LSLYVADENR.2b4_1.heavy 662.355 / 621.373 13333.0 30.465599060058594 47 17 10 10 10 3.7313489802935904 26.799959084001785 0.0 3 0.9760938718679444 7.965971339514027 13333.0 16.00017149592799 0.0 - - - - - - - 333.0 26 3 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 2829 356 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6983.[MT7]-LSLYVADENR.2y9_1.heavy 662.355 / 1066.52 22667.0 30.465599060058594 47 17 10 10 10 3.7313489802935904 26.799959084001785 0.0 3 0.9760938718679444 7.965971339514027 22667.0 21.75596880623875 0.0 - - - - - - - 333.0 45 7 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 2831 356 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6983.[MT7]-LSLYVADENR.2y6_1.heavy 662.355 / 703.337 10667.0 30.465599060058594 47 17 10 10 10 3.7313489802935904 26.799959084001785 0.0 3 0.9760938718679444 7.965971339514027 10667.0 17.12241552888222 0.0 - - - - - - - 333.0 21 4 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 2833 356 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6983.[MT7]-LSLYVADENR.2y7_1.heavy 662.355 / 866.4 10000.0 30.465599060058594 47 17 10 10 10 3.7313489802935904 26.799959084001785 0.0 3 0.9760938718679444 7.965971339514027 10000.0 43.97283340311826 0.0 - - - - - - - 333.0 20 3 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 2835 357 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1623.[MT7]-APAGQLPR.2y5_1.heavy 477.286 / 570.336 12878.0 20.334700107574463 43 17 10 6 10 2.7418545035138817 36.47166538991871 0.03840065002441406 3 0.9774381659929485 8.200781320170828 12878.0 19.61889000799606 1.0 - - - - - - - 337.6 25 5 MCM3 minichromosome maintenance complex component 3 2837 357 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1623.[MT7]-APAGQLPR.2y6_1.heavy 477.286 / 641.373 17100.0 20.334700107574463 43 17 10 6 10 2.7418545035138817 36.47166538991871 0.03840065002441406 3 0.9774381659929485 8.200781320170828 17100.0 77.881990521327 0.0 - - - - - - - 287.72727272727275 34 11 MCM3 minichromosome maintenance complex component 3 2839 357 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1623.[MT7]-APAGQLPR.2b1_1.heavy 477.286 / 216.146 71778.0 20.334700107574463 43 17 10 6 10 2.7418545035138817 36.47166538991871 0.03840065002441406 3 0.9774381659929485 8.200781320170828 71778.0 114.7390807217985 0.0 - - - - - - - 361.7142857142857 143 7 MCM3 minichromosome maintenance complex component 3 2841 357 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1623.[MT7]-APAGQLPR.2y7_1.heavy 477.286 / 738.426 181556.0 20.334700107574463 43 17 10 6 10 2.7418545035138817 36.47166538991871 0.03840065002441406 3 0.9774381659929485 8.200781320170828 181556.0 487.71379815172287 0.0 - - - - - - - 290.125 363 8 MCM3 minichromosome maintenance complex component 3 2843 358 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1751.[MT7]-EREVVNK[MT7].2b3_1.heavy 581.345 / 559.296 N/A N/A - - - - - - - - - 0.0 - - - - - - - MCM7 minichromosome maintenance complex component 7 2845 358 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1751.[MT7]-EREVVNK[MT7].2y5_1.heavy 581.345 / 732.437 N/A N/A - - - - - - - - - 0.0 - - - - - - - MCM7 minichromosome maintenance complex component 7 2847 358 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1751.[MT7]-EREVVNK[MT7].2y3_1.heavy 581.345 / 504.326 N/A N/A - - - - - - - - - 0.0 - - - - - - - MCM7 minichromosome maintenance complex component 7 2849 358 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1751.[MT7]-EREVVNK[MT7].2b6_1.heavy 581.345 / 871.475 N/A N/A - - - - - - - - - 0.0 - - - - - - - MCM7 minichromosome maintenance complex component 7 2851 359 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1752.[MT7]-FDILC[CAM]VVR.2b3_1.heavy 583.33 / 520.289 11122.0 39.02109909057617 50 20 10 10 10 8.180214373451795 12.224618504441848 0.0 3 0.993862539169945 15.745107515966067 11122.0 23.400415902140672 0.0 - - - - - - - 218.0 22 6 MCM2 minichromosome maintenance complex component 2 2853 359 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1752.[MT7]-FDILC[CAM]VVR.2y5_1.heavy 583.33 / 646.37 12212.0 39.02109909057617 50 20 10 10 10 8.180214373451795 12.224618504441848 0.0 3 0.993862539169945 15.745107515966067 12212.0 20.122399800532314 0.0 - - - - - - - 697.6 24 10 MCM2 minichromosome maintenance complex component 2 2855 359 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1752.[MT7]-FDILC[CAM]VVR.2y6_1.heavy 583.33 / 759.455 21589.0 39.02109909057617 50 20 10 10 10 8.180214373451795 12.224618504441848 0.0 3 0.993862539169945 15.745107515966067 21589.0 42.95517775229358 0.0 - - - - - - - 363.3333333333333 43 3 MCM2 minichromosome maintenance complex component 2 2857 359 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1752.[MT7]-FDILC[CAM]VVR.2y7_1.heavy 583.33 / 874.482 23988.0 39.02109909057617 50 20 10 10 10 8.180214373451795 12.224618504441848 0.0 3 0.993862539169945 15.745107515966067 23988.0 140.8469724770642 0.0 - - - - - - - 266.44444444444446 47 9 MCM2 minichromosome maintenance complex component 2 2859 360 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1899.[MT7]-LAFVLSSNSLK[MT7].2y5_1.heavy 733.945 / 692.406 4727.0 36.59280014038086 41 16 10 5 10 4.964947049350145 20.141201709913272 0.04019927978515625 3 0.963131301045104 6.40752086601261 4727.0 9.19103281292372 0.0 - - - - - - - 339.54545454545456 9 11 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 2861 360 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1899.[MT7]-LAFVLSSNSLK[MT7].2b4_1.heavy 733.945 / 575.367 9455.0 36.59280014038086 41 16 10 5 10 4.964947049350145 20.141201709913272 0.04019927978515625 3 0.963131301045104 6.40752086601261 9455.0 19.264879356568365 0.0 - - - - - - - 290.5 18 12 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 2863 360 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1899.[MT7]-LAFVLSSNSLK[MT7].2y6_1.heavy 733.945 / 779.438 6469.0 36.59280014038086 41 16 10 5 10 4.964947049350145 20.141201709913272 0.04019927978515625 3 0.963131301045104 6.40752086601261 6469.0 18.543254734756722 0.0 - - - - - - - 280.125 12 8 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 2865 360 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1899.[MT7]-LAFVLSSNSLK[MT7].2y7_1.heavy 733.945 / 892.522 4479.0 36.59280014038086 41 16 10 5 10 4.964947049350145 20.141201709913272 0.04019927978515625 3 0.963131301045104 6.40752086601261 4479.0 8.601750487518213 0.0 - - - - - - - 348.6 8 10 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 2867 361 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1753.[MT7]-AVPIRVNPR.3y7_2.heavy 389.248 / 426.264 14718.0 21.996150016784668 38 13 10 5 10 1.8234635977827538 47.27073515537914 0.04070091247558594 3 0.9295914789584736 4.623469997384196 14718.0 68.90536659081212 0.0 - - - - - - - 316.3333333333333 29 6 MCM4 minichromosome maintenance complex component 4 2869 361 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1753.[MT7]-AVPIRVNPR.3y4_1.heavy 389.248 / 485.283 13768.0 21.996150016784668 38 13 10 5 10 1.8234635977827538 47.27073515537914 0.04070091247558594 3 0.9295914789584736 4.623469997384196 13768.0 33.62290526315789 0.0 - - - - - - - 356.0 27 10 MCM4 minichromosome maintenance complex component 4 2871 361 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1753.[MT7]-AVPIRVNPR.3b2_1.heavy 389.248 / 315.215 17091.0 21.996150016784668 38 13 10 5 10 1.8234635977827538 47.27073515537914 0.04070091247558594 3 0.9295914789584736 4.623469997384196 17091.0 33.317155052123475 0.0 - - - - - - - 323.54545454545456 34 11 MCM4 minichromosome maintenance complex component 4 2873 361 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1753.[MT7]-AVPIRVNPR.3y8_2.heavy 389.248 / 475.798 13768.0 21.996150016784668 38 13 10 5 10 1.8234635977827538 47.27073515537914 0.04070091247558594 3 0.9295914789584736 4.623469997384196 13768.0 59.84736092542549 0.0 - - - - - - - 296.5 27 4 MCM4 minichromosome maintenance complex component 4 2875 362 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1754.[MT7]-QEEAEYVR.2y5_1.heavy 584.292 / 637.33 7403.0 19.695600509643555 48 18 10 10 10 4.586661679114207 17.689578112025934 0.0 3 0.9891053737644177 11.81302498411414 7403.0 44.9517196985803 0.0 - - - - - - - 251.55555555555554 14 9 CRK v-crk sarcoma virus CT10 oncogene homolog (avian) 2877 362 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1754.[MT7]-QEEAEYVR.2y6_1.heavy 584.292 / 766.373 8020.0 19.695600509643555 48 18 10 10 10 4.586661679114207 17.689578112025934 0.0 3 0.9891053737644177 11.81302498411414 8020.0 72.4135922330097 0.0 - - - - - - - 206.0 16 6 CRK v-crk sarcoma virus CT10 oncogene homolog (avian) 2879 362 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1754.[MT7]-QEEAEYVR.2b5_1.heavy 584.292 / 731.333 12544.0 19.695600509643555 48 18 10 10 10 4.586661679114207 17.689578112025934 0.0 3 0.9891053737644177 11.81302498411414 12544.0 72.28625324542493 0.0 - - - - - - - 284.84615384615387 25 13 CRK v-crk sarcoma virus CT10 oncogene homolog (avian) 2881 362 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1754.[MT7]-QEEAEYVR.2y7_1.heavy 584.292 / 895.416 16451.0 19.695600509643555 48 18 10 10 10 4.586661679114207 17.689578112025934 0.0 3 0.9891053737644177 11.81302498411414 16451.0 56.289177599798094 0.0 - - - - - - - 308.5 32 12 CRK v-crk sarcoma virus CT10 oncogene homolog (avian) 2883 363 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1628.[MT7]-ALDLLDR.2y4_1.heavy 480.286 / 516.314 93287.0 32.41270065307617 50 20 10 10 10 35.95022113566169 2.781624057961707 0.0 3 0.9989893531735883 38.8173674026369 93287.0 335.2725749689349 0.0 - - - - - - - 314.0 186 2 MAPK3 mitogen-activated protein kinase 3 2885 363 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1628.[MT7]-ALDLLDR.2y5_1.heavy 480.286 / 631.341 33608.0 32.41270065307617 50 20 10 10 10 35.95022113566169 2.781624057961707 0.0 3 0.9989893531735883 38.8173674026369 33608.0 150.9149044585987 0.0 - - - - - - - 314.0 67 3 MAPK3 mitogen-activated protein kinase 3 2887 363 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1628.[MT7]-ALDLLDR.2b4_1.heavy 480.286 / 557.341 32038.0 32.41270065307617 50 20 10 10 10 35.95022113566169 2.781624057961707 0.0 3 0.9989893531735883 38.8173674026369 32038.0 143.86490445859874 0.0 - - - - - - - 314.0 64 2 MAPK3 mitogen-activated protein kinase 3 2889 363 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1628.[MT7]-ALDLLDR.2y6_1.heavy 480.286 / 744.425 47429.0 32.41270065307617 50 20 10 10 10 35.95022113566169 2.781624057961707 0.0 3 0.9989893531735883 38.8173674026369 47429.0 69.25736051129205 0.0 - - - - - - - 314.0 94 1 MAPK3 mitogen-activated protein kinase 3 2891 364 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1756.[MT7]-TLTPISGGQR.2y8_1.heavy 587.339 / 815.437 15126.0 22.944599151611328 48 18 10 10 10 44.5965472256011 2.242326059327615 0.0 3 0.9836895219034432 9.650214241149602 15126.0 41.75129824561404 1.0 - - - - - - - 513.0 30 9 ORC1 origin recognition complex, subunit 1 2893 364 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1756.[MT7]-TLTPISGGQR.2y5_1.heavy 587.339 / 504.253 2564.0 22.944599151611328 48 18 10 10 10 44.5965472256011 2.242326059327615 0.0 3 0.9836895219034432 9.650214241149602 2564.0 1.333732119635891 4.0 - - - - - - - 732.4285714285714 5 7 ORC1 origin recognition complex, subunit 1 2895 364 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1756.[MT7]-TLTPISGGQR.2y9_1.heavy 587.339 / 928.521 14870.0 22.944599151611328 48 18 10 10 10 44.5965472256011 2.242326059327615 0.0 3 0.9836895219034432 9.650214241149602 14870.0 32.470748320012575 0.0 - - - - - - - 577.0 29 8 ORC1 origin recognition complex, subunit 1 2897 364 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1756.[MT7]-TLTPISGGQR.2y7_1.heavy 587.339 / 714.389 54865.0 22.944599151611328 48 18 10 10 10 44.5965472256011 2.242326059327615 0.0 3 0.9836895219034432 9.650214241149602 54865.0 134.95293265855 0.0 - - - - - - - 256.0 109 4 ORC1 origin recognition complex, subunit 1 2899 365 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1895.[MT7]-AILC[CAM]LLLGGVER.2y8_1.heavy 729.435 / 856.525 16803.0 47.13169860839844 47 17 10 10 10 6.105766468272027 16.377960165957784 0.0 3 0.9792998317237623 8.562950002873793 16803.0 82.58695212144804 0.0 - - - - - - - 197.6153846153846 33 13 MCM3 minichromosome maintenance complex component 3 2901 365 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1895.[MT7]-AILC[CAM]LLLGGVER.2y9_1.heavy 729.435 / 1016.56 34561.0 47.13169860839844 47 17 10 10 10 6.105766468272027 16.377960165957784 0.0 3 0.9792998317237623 8.562950002873793 34561.0 499.93316025296957 0.0 - - - - - - - 238.375 69 8 MCM3 minichromosome maintenance complex component 3 2903 365 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1895.[MT7]-AILC[CAM]LLLGGVER.2y10_1.heavy 729.435 / 1129.64 23334.0 47.13169860839844 47 17 10 10 10 6.105766468272027 16.377960165957784 0.0 3 0.9792998317237623 8.562950002873793 23334.0 341.30374766803476 0.0 - - - - - - - 210.875 46 8 MCM3 minichromosome maintenance complex component 3 2905 365 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1895.[MT7]-AILC[CAM]LLLGGVER.2y11_1.heavy 729.435 / 1242.72 10566.0 47.13169860839844 47 17 10 10 10 6.105766468272027 16.377960165957784 0.0 3 0.9792998317237623 8.562950002873793 10566.0 190.6024819427148 0.0 - - - - - - - 174.92307692307693 21 13 MCM3 minichromosome maintenance complex component 3 2907 366 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1629.[MT7]-EVIIAK[MT7].2y4_1.heavy 480.82 / 588.42 78109.0 24.37969970703125 50 20 10 10 10 8.01025778754345 12.483992731857828 0.0 3 0.9924345188944279 14.179793615727762 78109.0 155.3781182795699 0.0 - - - - - - - 279.0 156 5 AKT3;AKT2 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 2 2909 366 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1629.[MT7]-EVIIAK[MT7].2b3_1.heavy 480.82 / 486.304 74761.0 24.37969970703125 50 20 10 10 10 8.01025778754345 12.483992731857828 0.0 3 0.9924345188944279 14.179793615727762 74761.0 94.25066571087217 0.0 - - - - - - - 279.0 149 3 AKT3;AKT2 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 2 2911 366 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1629.[MT7]-EVIIAK[MT7].2y5_1.heavy 480.82 / 687.489 72809.0 24.37969970703125 50 20 10 10 10 8.01025778754345 12.483992731857828 0.0 3 0.9924345188944279 14.179793615727762 72809.0 86.29932605982442 1.0 - - - - - - - 279.0 145 6 AKT3;AKT2 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 2 2913 366 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1629.[MT7]-EVIIAK[MT7].2b4_1.heavy 480.82 / 599.388 23991.0 24.37969970703125 50 20 10 10 10 8.01025778754345 12.483992731857828 0.0 3 0.9924345188944279 14.179793615727762 23991.0 49.873763440860216 0.0 - - - - - - - 279.0 47 5 AKT3;AKT2 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 2 2915 367 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1896.[MT7]-SITVLVEGENTR.2y8_1.heavy 731.405 / 917.469 36667.0 30.270999908447266 44 14 10 10 10 5.029722786773288 19.88181143163019 0.0 3 0.9363642037799872 4.866102158751168 36667.0 77.53050705704912 0.0 - - - - - - - 333.0 73 8 MCM7 minichromosome maintenance complex component 7 2917 367 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1896.[MT7]-SITVLVEGENTR.2y5_1.heavy 731.405 / 576.274 21667.0 30.270999908447266 44 14 10 10 10 5.029722786773288 19.88181143163019 0.0 3 0.9363642037799872 4.866102158751168 21667.0 43.53930050974512 0.0 - - - - - - - 333.0 43 3 MCM7 minichromosome maintenance complex component 7 2919 367 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1896.[MT7]-SITVLVEGENTR.2y10_1.heavy 731.405 / 1117.58 11000.0 30.270999908447266 44 14 10 10 10 5.029722786773288 19.88181143163019 0.0 3 0.9363642037799872 4.866102158751168 11000.0 34.35152254697904 0.0 - - - - - - - 333.0 22 3 MCM7 minichromosome maintenance complex component 7 2921 367 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1896.[MT7]-SITVLVEGENTR.2y7_1.heavy 731.405 / 804.385 26000.0 30.270999908447266 44 14 10 10 10 5.029722786773288 19.88181143163019 0.0 3 0.9363642037799872 4.866102158751168 26000.0 48.73587212395303 0.0 - - - - - - - 333.0 52 10 MCM7 minichromosome maintenance complex component 7 2923 368 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1758.[MT7]-EGLLAIFK[MT7].2y4_1.heavy 589.873 / 622.404 32417.0 41.40230178833008 47 17 10 10 10 2.914675081778402 27.321845747543335 0.0 3 0.9782919302719324 8.36109155469739 32417.0 188.70947744663715 0.0 - - - - - - - 254.33333333333334 64 6 CTNNB1;JUP catenin (cadherin-associated protein), beta 1, 88kDa;junction plakoglobin 2925 368 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1758.[MT7]-EGLLAIFK[MT7].2b4_1.heavy 589.873 / 557.341 25362.0 41.40230178833008 47 17 10 10 10 2.914675081778402 27.321845747543335 0.0 3 0.9782919302719324 8.36109155469739 25362.0 63.155701179554384 0.0 - - - - - - - 735.7142857142857 50 7 CTNNB1;JUP catenin (cadherin-associated protein), beta 1, 88kDa;junction plakoglobin 2927 368 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1758.[MT7]-EGLLAIFK[MT7].2y3_1.heavy 589.873 / 551.367 16590.0 41.40230178833008 47 17 10 10 10 2.914675081778402 27.321845747543335 0.0 3 0.9782919302719324 8.36109155469739 16590.0 102.81815435873027 0.0 - - - - - - - 242.8181818181818 33 11 CTNNB1;JUP catenin (cadherin-associated protein), beta 1, 88kDa;junction plakoglobin 2929 368 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1758.[MT7]-EGLLAIFK[MT7].2b5_1.heavy 589.873 / 628.379 19641.0 41.40230178833008 47 17 10 10 10 2.914675081778402 27.321845747543335 0.0 3 0.9782919302719324 8.36109155469739 19641.0 191.26837696335076 0.0 - - - - - - - 225.54545454545453 39 11 CTNNB1;JUP catenin (cadherin-associated protein), beta 1, 88kDa;junction plakoglobin 2931 369 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1897.[MT7]-ITAVSLDVLDK[MT7].2y4_1.heavy 731.442 / 618.394 13258.0 35.89699935913086 38 16 9 5 8 4.184632358958643 19.062978116992404 0.04119873046875 4 0.9691003587356256 7.002626551955288 13258.0 22.044674509803922 1.0 - - - - - - - 255.0 50 3 EGF epidermal growth factor 2933 369 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1897.[MT7]-ITAVSLDVLDK[MT7].2b4_1.heavy 731.442 / 529.347 20396.0 35.89699935913086 38 16 9 5 8 4.184632358958643 19.062978116992404 0.04119873046875 4 0.9691003587356256 7.002626551955288 20396.0 89.58243137254902 0.0 - - - - - - - 255.0 40 5 EGF epidermal growth factor 2935 369 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1897.[MT7]-ITAVSLDVLDK[MT7].2y3_1.heavy 731.442 / 519.326 7904.0 35.89699935913086 38 16 9 5 8 4.184632358958643 19.062978116992404 0.04119873046875 4 0.9691003587356256 7.002626551955288 7904.0 49.59372549019608 2.0 - - - - - - - 255.0 29 6 EGF epidermal growth factor 2937 369 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1897.[MT7]-ITAVSLDVLDK[MT7].2y7_1.heavy 731.442 / 933.537 15552.0 35.89699935913086 38 16 9 5 8 4.184632358958643 19.062978116992404 0.04119873046875 4 0.9691003587356256 7.002626551955288 15552.0 53.059764705882344 0.0 - - - - - - - 605.625 31 8 EGF epidermal growth factor 2939 370 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1759.[MT7]-DVEQQFK[MT7].2y5_1.heavy 591.324 / 823.443 13584.0 22.56290054321289 48 18 10 10 10 3.5643859450228557 23.023656948889332 0.0 3 0.985199356285146 10.131761430207975 13584.0 38.35967611336032 0.0 - - - - - - - 277.875 27 8 MCM6 minichromosome maintenance complex component 6 2941 370 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1759.[MT7]-DVEQQFK[MT7].2b4_1.heavy 591.324 / 616.306 14078.0 22.56290054321289 48 18 10 10 10 3.5643859450228557 23.023656948889332 0.0 3 0.985199356285146 10.131761430207975 14078.0 42.93695006747639 0.0 - - - - - - - 277.875 28 8 MCM6 minichromosome maintenance complex component 6 2943 370 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1759.[MT7]-DVEQQFK[MT7].2y3_1.heavy 591.324 / 566.342 13090.0 22.56290054321289 48 18 10 10 10 3.5643859450228557 23.023656948889332 0.0 3 0.985199356285146 10.131761430207975 13090.0 19.684210526315788 0.0 - - - - - - - 352.85714285714283 26 7 MCM6 minichromosome maintenance complex component 6 2945 370 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1759.[MT7]-DVEQQFK[MT7].2b5_1.heavy 591.324 / 744.364 13831.0 22.56290054321289 48 18 10 10 10 3.5643859450228557 23.023656948889332 0.0 3 0.985199356285146 10.131761430207975 13831.0 33.59757085020243 0.0 - - - - - - - 352.85714285714283 27 7 MCM6 minichromosome maintenance complex component 6 2947 371 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1898.[MT7]-ELSVLEEDIK[MT7].3y3_1.heavy 488.28 / 519.326 11834.0 34.390098571777344 48 20 10 10 8 7.8372224500957905 12.759622511260702 0.0 4 0.9962338766009156 20.103825321563598 11834.0 30.328595247534718 1.0 - - - - - - - 282.0 36 3 RFWD2 ring finger and WD repeat domain 2 2949 371 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1898.[MT7]-ELSVLEEDIK[MT7].3b4_1.heavy 488.28 / 573.336 16906.0 34.390098571777344 48 20 10 10 8 7.8372224500957905 12.759622511260702 0.0 4 0.9962338766009156 20.103825321563598 16906.0 59.021124113475175 0.0 - - - - - - - 282.0 33 3 RFWD2 ring finger and WD repeat domain 2 2951 371 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1898.[MT7]-ELSVLEEDIK[MT7].3b5_1.heavy 488.28 / 686.42 10989.0 34.390098571777344 48 20 10 10 8 7.8372224500957905 12.759622511260702 0.0 4 0.9962338766009156 20.103825321563598 10989.0 36.05006637885306 1.0 - - - - - - - 282.0 23 1 RFWD2 ring finger and WD repeat domain 2 2953 371 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1898.[MT7]-ELSVLEEDIK[MT7].3y4_1.heavy 488.28 / 648.369 9580.0 34.390098571777344 48 20 10 10 8 7.8372224500957905 12.759622511260702 0.0 4 0.9962338766009156 20.103825321563598 9580.0 21.462095323175255 0.0 - - - - - - - 282.0 19 5 RFWD2 ring finger and WD repeat domain 2 2955 372 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1624.[MT7]-TDTSDK[MT7].2y4_1.heavy 477.753 / 594.321 14692.0 12.629225015640259 42 14 10 8 10 2.2946172440541517 37.914522979871904 0.019499778747558594 3 0.9472470406455321 5.34947330769688 14692.0 8.958536585365854 0.0 - - - - - - - 186.21875 29 32 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 2957 372 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1624.[MT7]-TDTSDK[MT7].2y5_1.heavy 477.753 / 709.349 11557.0 12.629225015640259 42 14 10 8 10 2.2946172440541517 37.914522979871904 0.019499778747558594 3 0.9472470406455321 5.34947330769688 11557.0 85.42517198248906 0.0 - - - - - - - 172.29032258064515 23 31 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 2959 372 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1624.[MT7]-TDTSDK[MT7].2b5_1.heavy 477.753 / 664.291 16659.0 12.629225015640259 42 14 10 8 10 2.2946172440541517 37.914522979871904 0.019499778747558594 3 0.9472470406455321 5.34947330769688 16659.0 34.315136765250514 0.0 - - - - - - - 220.86486486486487 33 37 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 2961 372 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1624.[MT7]-TDTSDK[MT7].2y1_1.heavy 477.753 / 291.215 26433.0 12.629225015640259 42 14 10 8 10 2.2946172440541517 37.914522979871904 0.019499778747558594 3 0.9472470406455321 5.34947330769688 26433.0 27.11943379116208 0.0 - - - - - - - 701.5882352941177 52 17 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 2963 373 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1891.[MT7]-LWGPGLPNFFR.2y8_1.heavy 724.402 / 947.51 4757.0 44.20349884033203 39 14 10 5 10 1.2124249195135248 51.48416516506984 0.0410003662109375 3 0.948668232738846 5.423676381839451 4757.0 21.746285714285715 0.0 - - - - - - - 229.0909090909091 9 11 PML;LOC652346 promyelocytic leukemia;probable transcription factor PML-like 2965 373 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1891.[MT7]-LWGPGLPNFFR.2y5_1.heavy 724.402 / 680.352 6156.0 44.20349884033203 39 14 10 5 10 1.2124249195135248 51.48416516506984 0.0410003662109375 3 0.948668232738846 5.423676381839451 6156.0 23.817857142857143 0.0 - - - - - - - 229.0909090909091 12 11 PML;LOC652346 promyelocytic leukemia;probable transcription factor PML-like 2967 373 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1891.[MT7]-LWGPGLPNFFR.2y9_1.heavy 724.402 / 1004.53 7556.0 44.20349884033203 39 14 10 5 10 1.2124249195135248 51.48416516506984 0.0410003662109375 3 0.948668232738846 5.423676381839451 7556.0 94.98971428571429 0.0 - - - - - - - 190.9090909090909 15 11 PML;LOC652346 promyelocytic leukemia;probable transcription factor PML-like 2969 373 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1891.[MT7]-LWGPGLPNFFR.2y10_1.heavy 724.402 / 1190.61 6017.0 44.20349884033203 39 14 10 5 10 1.2124249195135248 51.48416516506984 0.0410003662109375 3 0.948668232738846 5.423676381839451 6017.0 31.58925 0.0 - - - - - - - 233.33333333333334 12 6 PML;LOC652346 promyelocytic leukemia;probable transcription factor PML-like 2971 374 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1625.[MT7]-VFYLK[MT7].2b3_1.heavy 479.304 / 554.31 43939.0 31.55579948425293 45 20 10 5 10 6.4407175693714125 15.526220319851658 0.0485992431640625 3 0.9932359921048587 14.997373764536722 43939.0 175.26481199186992 0.0 - - - - - - - 328.0 87 2 YWHAQ;SFN;YWHAB;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;stratifin;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 2973 374 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1625.[MT7]-VFYLK[MT7].2y4_1.heavy 479.304 / 714.431 250190.0 31.55579948425293 45 20 10 5 10 6.4407175693714125 15.526220319851658 0.0485992431640625 3 0.9932359921048587 14.997373764536722 250190.0 402.7560440050878 0.0 - - - - - - - 328.0 500 1 YWHAQ;SFN;YWHAB;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;stratifin;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 2975 374 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1625.[MT7]-VFYLK[MT7].2b4_1.heavy 479.304 / 667.394 19674.0 31.55579948425293 45 20 10 5 10 6.4407175693714125 15.526220319851658 0.0485992431640625 3 0.9932359921048587 14.997373764536722 19674.0 66.27978658536585 0.0 - - - - - - - 328.0 39 6 YWHAQ;SFN;YWHAB;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;stratifin;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 2977 374 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1625.[MT7]-VFYLK[MT7].2y3_1.heavy 479.304 / 567.362 135096.0 31.55579948425293 45 20 10 5 10 6.4407175693714125 15.526220319851658 0.0485992431640625 3 0.9932359921048587 14.997373764536722 135096.0 300.56800609756095 0.0 - - - - - - - 328.0 270 1 YWHAQ;SFN;YWHAB;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;stratifin;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 2979 375 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1892.[MT7]-SALQELEELK[MT7].2y5_1.heavy 724.416 / 775.468 4618.0 37.2135009765625 47 17 10 10 10 35.51519312832656 2.815696359545938 0.0 3 0.9758751109431912 7.929626120470784 4618.0 7.924716049382716 0.0 - - - - - - - 381.85714285714283 9 7 CDC27 cell division cycle 27 homolog (S. cerevisiae) 2981 375 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1892.[MT7]-SALQELEELK[MT7].2b4_1.heavy 724.416 / 544.321 3889.0 37.2135009765625 47 17 10 10 10 35.51519312832656 2.815696359545938 0.0 3 0.9758751109431912 7.929626120470784 3889.0 5.051594302929277 2.0 - - - - - - - 375.54545454545456 12 11 CDC27 cell division cycle 27 homolog (S. cerevisiae) 2983 375 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1892.[MT7]-SALQELEELK[MT7].2y6_1.heavy 724.416 / 904.511 4618.0 37.2135009765625 47 17 10 10 10 35.51519312832656 2.815696359545938 0.0 3 0.9758751109431912 7.929626120470784 4618.0 12.020102880658435 0.0 - - - - - - - 416.57142857142856 9 7 CDC27 cell division cycle 27 homolog (S. cerevisiae) 2985 375 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1892.[MT7]-SALQELEELK[MT7].2b5_1.heavy 724.416 / 673.364 6806.0 37.2135009765625 47 17 10 10 10 35.51519312832656 2.815696359545938 0.0 3 0.9758751109431912 7.929626120470784 6806.0 17.271742112482855 0.0 - - - - - - - 833.1428571428571 13 7 CDC27 cell division cycle 27 homolog (S. cerevisiae) 2987 376 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1893.[MT7]-VGDALEEVLSK[MT7].2y8_1.heavy 724.416 / 1032.61 16362.0 37.495399475097656 45 15 10 10 10 1.6738665178208545 41.4894572186984 0.0 3 0.9553390883582388 5.817934746882682 16362.0 40.27215189873418 0.0 - - - - - - - 270.85714285714283 32 7 GADD45A growth arrest and DNA-damage-inducible, alpha 2989 376 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1893.[MT7]-VGDALEEVLSK[MT7].2y10_1.heavy 724.416 / 1204.65 9011.0 37.495399475097656 45 15 10 10 10 1.6738665178208545 41.4894572186984 0.0 3 0.9553390883582388 5.817934746882682 9011.0 43.94610476658057 0.0 - - - - - - - 308.1 18 10 GADD45A growth arrest and DNA-damage-inducible, alpha 2991 376 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1893.[MT7]-VGDALEEVLSK[MT7].2b7_1.heavy 724.416 / 858.432 13990.0 37.495399475097656 45 15 10 10 10 1.6738665178208545 41.4894572186984 0.0 3 0.9553390883582388 5.817934746882682 13990.0 41.32067510548523 0.0 - - - - - - - 355.5 27 14 GADD45A growth arrest and DNA-damage-inducible, alpha 2993 376 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1893.[MT7]-VGDALEEVLSK[MT7].2b5_1.heavy 724.416 / 600.347 9485.0 37.495399475097656 45 15 10 10 10 1.6738665178208545 41.4894572186984 0.0 3 0.9553390883582388 5.817934746882682 9485.0 20.675691843760287 0.0 - - - - - - - 395.0 18 6 GADD45A growth arrest and DNA-damage-inducible, alpha 2995 377 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1627.[MT7]-C[CAM]AAPQIR.2y4_1.heavy 480.264 / 513.314 9433.0 19.092199325561523 48 20 10 10 8 35.722366577463184 2.799366603641787 0.0 4 0.9988624527578146 36.58781470781802 9433.0 15.972211155378485 0.0 - - - - - - - 267.6666666666667 18 12 ORC1 origin recognition complex, subunit 1 2997 377 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1627.[MT7]-C[CAM]AAPQIR.2y5_1.heavy 480.264 / 584.352 5820.0 19.092199325561523 48 20 10 10 8 35.722366577463184 2.799366603641787 0.0 4 0.9988624527578146 36.58781470781802 5820.0 8.170539146678218 0.0 - - - - - - - 281.0 11 10 ORC1 origin recognition complex, subunit 1 2999 377 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1627.[MT7]-C[CAM]AAPQIR.2y6_1.heavy 480.264 / 655.389 14451.0 19.092199325561523 48 20 10 10 8 35.722366577463184 2.799366603641787 0.0 4 0.9988624527578146 36.58781470781802 14451.0 29.58614202657807 0.0 - - - - - - - 321.0 28 5 ORC1 origin recognition complex, subunit 1 3001 377 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1627.[MT7]-C[CAM]AAPQIR.2b5_1.heavy 480.264 / 672.326 6623.0 19.092199325561523 48 20 10 10 8 35.722366577463184 2.799366603641787 0.0 4 0.9988624527578146 36.58781470781802 6623.0 19.819451371571077 1.0 - - - - - - - 262.53846153846155 16 13 ORC1 origin recognition complex, subunit 1 3003 378 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1894.[MT7]-C[CAM]LQWTTVIER.2b3_1.heavy 725.386 / 546.283 26808.0 34.52669906616211 45 15 10 10 10 1.9479353605078482 34.22427048569308 0.0 3 0.9530384525360602 5.672529326804854 26808.0 41.27318475562637 0.0 - - - - - - - 279.0 53 4 AKT3;AKT1;AKT2 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 1;v-akt murine thymoma viral oncogene homolog 2 3005 378 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1894.[MT7]-C[CAM]LQWTTVIER.2y8_1.heavy 725.386 / 1032.55 18151.0 34.52669906616211 45 15 10 10 10 1.9479353605078482 34.22427048569308 0.0 3 0.9530384525360602 5.672529326804854 18151.0 92.70672043010751 0.0 - - - - - - - 279.0 36 6 AKT3;AKT1;AKT2 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 1;v-akt murine thymoma viral oncogene homolog 2 3007 378 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1894.[MT7]-C[CAM]LQWTTVIER.2y9_1.heavy 725.386 / 1145.63 21223.0 34.52669906616211 45 15 10 10 10 1.9479353605078482 34.22427048569308 0.0 3 0.9530384525360602 5.672529326804854 21223.0 144.52939068100358 0.0 - - - - - - - 279.0 42 3 AKT3;AKT1;AKT2 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 1;v-akt murine thymoma viral oncogene homolog 2 3009 378 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1894.[MT7]-C[CAM]LQWTTVIER.2y7_1.heavy 725.386 / 904.489 34347.0 34.52669906616211 45 15 10 10 10 1.9479353605078482 34.22427048569308 0.0 3 0.9530384525360602 5.672529326804854 34347.0 88.18054058562373 0.0 - - - - - - - 638.0 68 7 AKT3;AKT1;AKT2 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 1;v-akt murine thymoma viral oncogene homolog 2 3011 379 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6978.[MT7]-VVSGIDLAK[MT7].2y4_1.heavy 595.373 / 590.363 18333.0 28.7106990814209 48 18 10 10 10 4.433596619167835 18.04748029213727 0.0 3 0.9892409289414301 11.887343920172055 18333.0 20.235584883023396 0.0 - - - - - - - 333.0 36 5 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 3013 379 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6978.[MT7]-VVSGIDLAK[MT7].2y8_1.heavy 595.373 / 946.569 32333.0 28.7106990814209 48 18 10 10 10 4.433596619167835 18.04748029213727 0.0 3 0.9892409289414301 11.887343920172055 32333.0 80.53355305697151 0.0 - - - - - - - 333.0 64 3 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 3015 379 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6978.[MT7]-VVSGIDLAK[MT7].2y6_1.heavy 595.373 / 760.469 15667.0 28.7106990814209 48 18 10 10 10 4.433596619167835 18.04748029213727 0.0 3 0.9892409289414301 11.887343920172055 15667.0 24.6737205224955 0.0 - - - - - - - 333.0 31 1 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 3017 379 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6978.[MT7]-VVSGIDLAK[MT7].2y7_1.heavy 595.373 / 847.5 24667.0 28.7106990814209 48 18 10 10 10 4.433596619167835 18.04748029213727 0.0 3 0.9892409289414301 11.887343920172055 24667.0 80.57697368634382 0.0 - - - - - - - 333.0 49 4 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 3019 380 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1611.[MT7]-LLQTFR.2b3_1.heavy 461.286 / 499.336 8960.0 31.051000595092773 50 20 10 10 10 6.036714988099477 16.56530086266053 0.0 3 0.9963248462477918 20.351269967781842 8960.0 25.734250220165265 1.0 - - - - - - - 332.0 20 3 PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 3021 380 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1611.[MT7]-LLQTFR.2y4_1.heavy 461.286 / 551.294 15266.0 31.051000595092773 50 20 10 10 10 6.036714988099477 16.56530086266053 0.0 3 0.9963248462477918 20.351269967781842 15266.0 36.785542168674695 0.0 - - - - - - - 332.0 30 1 PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 3023 380 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1611.[MT7]-LLQTFR.2y5_1.heavy 461.286 / 664.378 58076.0 31.051000595092773 50 20 10 10 10 6.036714988099477 16.56530086266053 0.0 3 0.9963248462477918 20.351269967781842 58076.0 91.84363763441512 0.0 - - - - - - - 332.0 116 3 PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 3025 380 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1611.[MT7]-LLQTFR.2b4_1.heavy 461.286 / 600.384 7301.0 31.051000595092773 50 20 10 10 10 6.036714988099477 16.56530086266053 0.0 3 0.9963248462477918 20.351269967781842 7301.0 18.03259036144578 0.0 - - - - - - - 664.0 14 4 PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 3027 381 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1612.[MT7]-YLLFAR.2b3_1.heavy 463.783 / 534.341 10698.0 36.165000915527344 48 18 10 10 10 4.9828619909991545 20.068787813235858 0.0 3 0.9868452452877416 10.748398352581317 10698.0 39.51324165029469 0.0 - - - - - - - 255.0 21 3 MCM6 minichromosome maintenance complex component 6 3029 381 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1612.[MT7]-YLLFAR.2y4_1.heavy 463.783 / 506.309 14519.0 36.165000915527344 48 18 10 10 10 4.9828619909991545 20.068787813235858 0.0 3 0.9868452452877416 10.748398352581317 14519.0 34.207068062827226 0.0 - - - - - - - 255.0 29 8 MCM6 minichromosome maintenance complex component 6 3031 381 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1612.[MT7]-YLLFAR.2y5_1.heavy 463.783 / 619.393 18850.0 36.165000915527344 48 18 10 10 10 4.9828619909991545 20.068787813235858 0.0 3 0.9868452452877416 10.748398352581317 18850.0 90.70679601683607 0.0 - - - - - - - 255.0 37 4 MCM6 minichromosome maintenance complex component 6 3033 381 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1612.[MT7]-YLLFAR.2b4_1.heavy 463.783 / 681.409 4330.0 36.165000915527344 48 18 10 10 10 4.9828619909991545 20.068787813235858 0.0 3 0.9868452452877416 10.748398352581317 4330.0 24.789737894371896 0.0 - - - - - - - 255.0 8 5 MCM6 minichromosome maintenance complex component 6 3035 382 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1762.[MT7]-LTSPGALLFQ.2b8_1.heavy 595.849 / 897.553 13706.0 41.54672431945801 34 8 10 6 10 0.6345932170477666 85.87122581472552 0.03749847412109375 3 0.7611220368295301 2.4729957684736323 13706.0 55.30132448899052 0.0 - - - - - - - 331.55555555555554 27 9 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 3037 382 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1762.[MT7]-LTSPGALLFQ.2b6_1.heavy 595.849 / 671.385 12828.0 41.54672431945801 34 8 10 6 10 0.6345932170477666 85.87122581472552 0.03749847412109375 3 0.7611220368295301 2.4729957684736323 12828.0 91.63904303950318 0.0 - - - - - - - 201.0 25 7 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 3039 382 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1762.[MT7]-LTSPGALLFQ.2b7_1.heavy 595.849 / 784.469 21614.0 41.54672431945801 34 8 10 6 10 0.6345932170477666 85.87122581472552 0.03749847412109375 3 0.7611220368295301 2.4729957684736323 21614.0 97.05074749833761 0.0 - - - - - - - 246.0 43 10 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 3041 382 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1762.[MT7]-LTSPGALLFQ.2b5_1.heavy 595.849 / 600.347 2636.0 41.54672431945801 34 8 10 6 10 0.6345932170477666 85.87122581472552 0.03749847412109375 3 0.7611220368295301 2.4729957684736323 2636.0 5.256980056980057 1.0 - - - - - - - 263.5 5 8 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 3043 383 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1610.[MT7]-LTETHLPAQAR.3y6_1.heavy 460.929 / 655.389 16659.0 22.520599365234375 50 20 10 10 10 4.859075210128759 16.953513374070013 0.0 3 0.9929784969836188 14.719494036940345 16659.0 83.40832653061224 0.0 - - - - - - - 245.0 33 9 BUB1 budding uninhibited by benzimidazoles 1 homolog (yeast) 3045 383 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1610.[MT7]-LTETHLPAQAR.3b4_1.heavy 460.929 / 589.331 30379.0 22.520599365234375 50 20 10 10 10 4.859075210128759 16.953513374070013 0.0 3 0.9929784969836188 14.719494036940345 30379.0 86.79714285714286 0.0 - - - - - - - 336.875 60 8 BUB1 budding uninhibited by benzimidazoles 1 homolog (yeast) 3047 383 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1610.[MT7]-LTETHLPAQAR.3b3_1.heavy 460.929 / 488.284 24009.0 22.520599365234375 50 20 10 10 10 4.859075210128759 16.953513374070013 0.0 3 0.9929784969836188 14.719494036940345 24009.0 99.95583673469389 0.0 - - - - - - - 392.0 48 10 BUB1 budding uninhibited by benzimidazoles 1 homolog (yeast) 3049 383 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1610.[MT7]-LTETHLPAQAR.3y5_1.heavy 460.929 / 542.305 190114.0 22.520599365234375 50 20 10 10 10 4.859075210128759 16.953513374070013 0.0 3 0.9929784969836188 14.719494036940345 190114.0 321.25386122448975 0.0 - - - - - - - 367.5 380 8 BUB1 budding uninhibited by benzimidazoles 1 homolog (yeast) 3051 384 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1760.[MT7]-QVALLTNER.2y8_1.heavy 594.347 / 915.526 16045.0 26.683833440144856 37 16 6 5 10 2.7005279841083007 29.01338173063936 0.047199249267578125 3 0.9621430669616775 6.322807485099154 16045.0 58.84583819113231 0.0 - - - - - - - 315.0 32 5 ORC3 origin recognition complex, subunit 3 3053 384 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1760.[MT7]-QVALLTNER.2b4_1.heavy 594.347 / 556.357 N/A 26.683833440144856 37 16 6 5 10 2.7005279841083007 29.01338173063936 0.047199249267578125 3 0.9621430669616775 6.322807485099154 8495.0 2.6355785834710455 3.0 - - - - - - - 315.0 56 2 ORC3 origin recognition complex, subunit 3 3055 384 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1760.[MT7]-QVALLTNER.2y6_1.heavy 594.347 / 745.42 10068.0 26.683833440144856 37 16 6 5 10 2.7005279841083007 29.01338173063936 0.047199249267578125 3 0.9621430669616775 6.322807485099154 10068.0 13.780477162517895 0.0 - - - - - - - 769.0 20 9 ORC3 origin recognition complex, subunit 3 3057 384 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1760.[MT7]-QVALLTNER.2y7_1.heavy 594.347 / 816.457 18562.0 26.683833440144856 37 16 6 5 10 2.7005279841083007 29.01338173063936 0.047199249267578125 3 0.9621430669616775 6.322807485099154 18562.0 46.71448337420172 0.0 - - - - - - - 315.0 37 6 ORC3 origin recognition complex, subunit 3 3059 385 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1766.[MT7]-YADLEAVNR.2y8_1.heavy 597.815 / 887.458 38166.0 25.75029945373535 47 17 10 10 10 3.664070117969247 27.29205413116478 0.0 3 0.9724551490432974 7.41891170228235 38166.0 138.22935007062287 0.0 - - - - - - - 301.0 76 7 RHOBTB2;RHOBTB1 Rho-related BTB domain containing 2;Rho-related BTB domain containing 1 3061 385 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1766.[MT7]-YADLEAVNR.2y6_1.heavy 597.815 / 701.394 29451.0 25.75029945373535 47 17 10 10 10 3.664070117969247 27.29205413116478 0.0 3 0.9724551490432974 7.41891170228235 29451.0 35.5235002042504 0.0 - - - - - - - 301.0 58 5 RHOBTB2;RHOBTB1 Rho-related BTB domain containing 2;Rho-related BTB domain containing 1 3063 385 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1766.[MT7]-YADLEAVNR.2b5_1.heavy 597.815 / 736.363 11420.0 25.75029945373535 47 17 10 10 10 3.664070117969247 27.29205413116478 0.0 3 0.9724551490432974 7.41891170228235 11420.0 33.632945091514145 0.0 - - - - - - - 301.0 22 5 RHOBTB2;RHOBTB1 Rho-related BTB domain containing 2;Rho-related BTB domain containing 1 3065 385 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1766.[MT7]-YADLEAVNR.2y7_1.heavy 597.815 / 816.421 14425.0 25.75029945373535 47 17 10 10 10 3.664070117969247 27.29205413116478 0.0 3 0.9724551490432974 7.41891170228235 14425.0 17.041181364392678 0.0 - - - - - - - 301.0 28 4 RHOBTB2;RHOBTB1 Rho-related BTB domain containing 2;Rho-related BTB domain containing 1 3067 386 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1763.[MT7]-VISSIEQK[MT7].2y5_1.heavy 596.363 / 748.432 30035.0 25.07314968109131 43 18 10 5 10 10.307069917129898 9.702078360194722 0.04269981384277344 3 0.9888534316059513 11.678512838356687 30035.0 66.52501030394234 0.0 - - - - - - - 289.0 60 3 YWHAQ;YWHAB;YWHAG;YWHAH tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide 3069 386 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1763.[MT7]-VISSIEQK[MT7].2y3_1.heavy 596.363 / 548.316 28302.0 25.07314968109131 43 18 10 5 10 10.307069917129898 9.702078360194722 0.04269981384277344 3 0.9888534316059513 11.678512838356687 28302.0 37.95849828509769 0.0 - - - - - - - 686.0 56 8 YWHAQ;YWHAB;YWHAG;YWHAH tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide 3071 386 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1763.[MT7]-VISSIEQK[MT7].2y6_1.heavy 596.363 / 835.464 67868.0 25.07314968109131 43 18 10 5 10 10.307069917129898 9.702078360194722 0.04269981384277344 3 0.9888534316059513 11.678512838356687 67868.0 160.90426309561258 0.0 - - - - - - - 619.1428571428571 135 7 YWHAQ;YWHAB;YWHAG;YWHAH tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide 3073 386 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1763.[MT7]-VISSIEQK[MT7].2y7_1.heavy 596.363 / 948.548 73066.0 25.07314968109131 43 18 10 5 10 10.307069917129898 9.702078360194722 0.04269981384277344 3 0.9888534316059513 11.678512838356687 73066.0 146.80697459584295 0.0 - - - - - - - 708.9090909090909 146 11 YWHAQ;YWHAB;YWHAG;YWHAH tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide 3075 387 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1764.[MT7]-NLAQTYLAR.2y8_1.heavy 597.342 / 935.531 12308.0 28.414100646972656 46 16 10 10 10 2.543224151355999 31.352562034941077 0.0 3 0.9648650841543873 6.564672502761109 12308.0 23.370400801603207 0.0 - - - - - - - 333.0 24 4 PML;LOC652346 promyelocytic leukemia;probable transcription factor PML-like 3077 387 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1764.[MT7]-NLAQTYLAR.2y5_1.heavy 597.342 / 623.351 4990.0 28.414100646972656 46 16 10 10 10 2.543224151355999 31.352562034941077 0.0 3 0.9648650841543873 6.564672502761109 4990.0 4.875046974821496 1.0 - - - - - - - 333.0 9 5 PML;LOC652346 promyelocytic leukemia;probable transcription factor PML-like 3079 387 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1764.[MT7]-NLAQTYLAR.2y6_1.heavy 597.342 / 751.41 11310.0 28.414100646972656 46 16 10 10 10 2.543224151355999 31.352562034941077 0.0 3 0.9648650841543873 6.564672502761109 11310.0 23.810526315789474 0.0 - - - - - - - 333.0 22 6 PML;LOC652346 promyelocytic leukemia;probable transcription factor PML-like 3081 387 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1764.[MT7]-NLAQTYLAR.2y7_1.heavy 597.342 / 822.447 21289.0 28.414100646972656 46 16 10 10 10 2.543224151355999 31.352562034941077 0.0 3 0.9648650841543873 6.564672502761109 21289.0 29.929826934868174 0.0 - - - - - - - 333.0 42 4 PML;LOC652346 promyelocytic leukemia;probable transcription factor PML-like 3083 388 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1769.[MT7]-TLSSFFTPR.2y8_1.heavy 600.331 / 954.504 5417.0 36.98537540435791 38 17 10 5 6 3.443300339605237 29.04190460814251 0.040699005126953125 5 0.979810682666219 8.670979454861442 5417.0 23.67705027011376 0.0 - - - - - - - 287.0 10 6 LIG1 ligase I, DNA, ATP-dependent 3085 388 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1769.[MT7]-TLSSFFTPR.2y5_1.heavy 600.331 / 667.356 1477.0 36.98537540435791 38 17 10 5 6 3.443300339605237 29.04190460814251 0.040699005126953125 5 0.979810682666219 8.670979454861442 1477.0 3.6024390243902435 4.0 - - - - - - - 340.61538461538464 3 13 LIG1 ligase I, DNA, ATP-dependent 3087 388 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1769.[MT7]-TLSSFFTPR.2y6_1.heavy 600.331 / 754.388 2462.0 36.98537540435791 38 17 10 5 6 3.443300339605237 29.04190460814251 0.040699005126953125 5 0.979810682666219 8.670979454861442 2462.0 1.5825608759264476 4.0 - - - - - - - 386.57142857142856 8 7 LIG1 ligase I, DNA, ATP-dependent 3089 388 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1769.[MT7]-TLSSFFTPR.2y7_1.heavy 600.331 / 841.42 5910.0 36.98537540435791 38 17 10 5 6 3.443300339605237 29.04190460814251 0.040699005126953125 5 0.979810682666219 8.670979454861442 5910.0 22.222560975609753 1.0 - - - - - - - 369.0 11 8 LIG1 ligase I, DNA, ATP-dependent 3091 389 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1619.[MT7]-LEGIITR.2y5_1.heavy 473.296 / 559.356 7667.0 28.95240020751953 46 16 10 10 10 2.95443291870529 26.470592480666962 0.0 3 0.967608704076748 6.838626793519649 7667.0 22.51058828828829 0.0 - - - - - - - 333.0 15 6 SMC3 structural maintenance of chromosomes 3 3093 389 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1619.[MT7]-LEGIITR.2b4_1.heavy 473.296 / 557.341 4333.0 28.95240020751953 46 16 10 10 10 2.95443291870529 26.470592480666962 0.0 3 0.967608704076748 6.838626793519649 4333.0 16.25818712265489 0.0 - - - - - - - 333.0 8 8 SMC3 structural maintenance of chromosomes 3 3095 389 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1619.[MT7]-LEGIITR.2y6_1.heavy 473.296 / 688.399 11667.0 28.95240020751953 46 16 10 10 10 2.95443291870529 26.470592480666962 0.0 3 0.967608704076748 6.838626793519649 11667.0 18.727591822955738 0.0 - - - - - - - 333.0 23 2 SMC3 structural maintenance of chromosomes 3 3097 389 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1619.[MT7]-LEGIITR.2b5_1.heavy 473.296 / 670.426 3000.0 28.95240020751953 46 16 10 10 10 2.95443291870529 26.470592480666962 0.0 3 0.967608704076748 6.838626793519649 3000.0 9.454732093412753 0.0 - - - - - - - 333.0 6 4 SMC3 structural maintenance of chromosomes 3 3099 390 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1767.[MT7]-NLLSVAYK[MT7].2y4_1.heavy 598.368 / 624.384 20400.0 31.38759994506836 43 13 10 10 10 1.820801726400405 43.582174507040804 0.0 3 0.9291315072949505 4.608259909505444 20400.0 49.6048632218845 0.0 - - - - - - - 799.0 40 7 YWHAQ;SFN;YWHAB;YWHAE;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;stratifin;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 3101 390 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1767.[MT7]-NLLSVAYK[MT7].2y5_1.heavy 598.368 / 711.416 99696.0 31.38759994506836 43 13 10 10 10 1.820801726400405 43.582174507040804 0.0 3 0.9291315072949505 4.608259909505444 99696.0 311.6852800694746 0.0 - - - - - - - 329.0 199 3 YWHAQ;SFN;YWHAB;YWHAE;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;stratifin;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 3103 390 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1767.[MT7]-NLLSVAYK[MT7].2y3_1.heavy 598.368 / 525.315 46393.0 31.38759994506836 43 13 10 10 10 1.820801726400405 43.582174507040804 0.0 3 0.9291315072949505 4.608259909505444 46393.0 44.536339918946304 0.0 - - - - - - - 329.0 92 1 YWHAQ;SFN;YWHAB;YWHAE;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;stratifin;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 3105 390 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1767.[MT7]-NLLSVAYK[MT7].2y6_1.heavy 598.368 / 824.5 39812.0 31.38759994506836 43 13 10 10 10 1.820801726400405 43.582174507040804 0.0 3 0.9291315072949505 4.608259909505444 39812.0 59.53648632218845 0.0 - - - - - - - 781.375 79 8 YWHAQ;SFN;YWHAB;YWHAE;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;stratifin;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 3107 391 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1617.[MT7]-TLLAILR.2y5_1.heavy 472.325 / 585.408 26283.0 39.6432991027832 43 18 10 5 10 4.646555713121833 21.521317331373186 0.04019927978515625 3 0.9828269541735888 9.404056419491967 26283.0 153.11087264150945 0.0 - - - - - - - 247.33333333333334 52 6 MCM7 minichromosome maintenance complex component 7 3109 391 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1617.[MT7]-TLLAILR.2b4_1.heavy 472.325 / 543.362 39001.0 39.6432991027832 43 18 10 5 10 4.646555713121833 21.521317331373186 0.04019927978515625 3 0.9828269541735888 9.404056419491967 39001.0 199.47276954177894 0.0 - - - - - - - 318.0 78 8 MCM7 minichromosome maintenance complex component 7 3111 391 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1617.[MT7]-TLLAILR.2y6_1.heavy 472.325 / 698.492 43452.0 39.6432991027832 43 18 10 5 10 4.646555713121833 21.521317331373186 0.04019927978515625 3 0.9828269541735888 9.404056419491967 43452.0 257.56924528301886 0.0 - - - - - - - 302.85714285714283 86 7 MCM7 minichromosome maintenance complex component 7 3113 391 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1617.[MT7]-TLLAILR.2b5_1.heavy 472.325 / 656.446 17805.0 39.6432991027832 43 18 10 5 10 4.646555713121833 21.521317331373186 0.04019927978515625 3 0.9828269541735888 9.404056419491967 17805.0 80.62641509433962 0.0 - - - - - - - 302.85714285714283 35 7 MCM7 minichromosome maintenance complex component 7 3115 392 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1768.[MT7]-DMMFQLLR.2b3_1.heavy 599.316 / 522.217 6259.0 40.592899322509766 44 14 10 10 10 1.5408032166628587 44.01184036413151 0.0 3 0.9430165274077416 5.145217328693382 6259.0 8.062970602042915 0.0 - - - - - - - 303.0 12 4 CDK6 cyclin-dependent kinase 6 3117 392 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1768.[MT7]-DMMFQLLR.2y5_1.heavy 599.316 / 676.414 8277.0 40.592899322509766 44 14 10 10 10 1.5408032166628587 44.01184036413151 0.0 3 0.9430165274077416 5.145217328693382 8277.0 36.05821782178218 0.0 - - - - - - - 264.15384615384613 16 13 CDK6 cyclin-dependent kinase 6 3119 392 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1768.[MT7]-DMMFQLLR.2b5_1.heavy 599.316 / 797.344 6259.0 40.592899322509766 44 14 10 10 10 1.5408032166628587 44.01184036413151 0.0 3 0.9430165274077416 5.145217328693382 6259.0 19.83049504950495 0.0 - - - - - - - 202.0 12 3 CDK6 cyclin-dependent kinase 6 3121 392 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1768.[MT7]-DMMFQLLR.2y7_1.heavy 599.316 / 938.495 7672.0 40.592899322509766 44 14 10 10 10 1.5408032166628587 44.01184036413151 0.0 3 0.9430165274077416 5.145217328693382 7672.0 11.731568265246997 1.0 - - - - - - - 246.88888888888889 18 9 CDK6 cyclin-dependent kinase 6 3123 393 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1618.[MT7]-QAQDLAR.2y5_1.heavy 473.265 / 602.326 15892.0 16.945600509643555 50 20 10 10 10 16.58782934564362 6.028516324606541 0.0 3 0.9991941778135087 43.47239743399264 15892.0 30.92268175781193 0.0 - - - - - - - 284.14285714285717 31 7 HRAS;KRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog;v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog 3125 393 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1618.[MT7]-QAQDLAR.2b4_1.heavy 473.265 / 587.291 118198.0 16.945600509643555 50 20 10 10 10 16.58782934564362 6.028516324606541 0.0 3 0.9991941778135087 43.47239743399264 118198.0 346.8235054366216 0.0 - - - - - - - 331.3333333333333 236 3 HRAS;KRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog;v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog 3127 393 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1618.[MT7]-QAQDLAR.2y6_1.heavy 473.265 / 673.363 98830.0 16.945600509643555 50 20 10 10 10 16.58782934564362 6.028516324606541 0.0 3 0.9991941778135087 43.47239743399264 98830.0 364.2676737160121 0.0 - - - - - - - 248.625 197 8 HRAS;KRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog;v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog 3129 393 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1618.[MT7]-QAQDLAR.2b5_1.heavy 473.265 / 700.375 28308.0 16.945600509643555 50 20 10 10 10 16.58782934564362 6.028516324606541 0.0 3 0.9991941778135087 43.47239743399264 28308.0 93.16807455001916 0.0 - - - - - - - 284.0 56 7 HRAS;KRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog;v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog 3131 394 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1615.[MT7]-EFLDK[MT7].2b3_1.heavy 470.273 / 534.304 7518.0 25.180700302124023 47 17 10 10 10 2.705142861476785 36.96662435987142 0.0 3 0.9700120279669372 7.108819770424696 7518.0 11.4361970613656 0.0 - - - - - - - 289.0 15 6 MAST1;MAST2;MAST4;VPS33A;BUB1 microtubule associated serine/threonine kinase 1;microtubule associated serine/threonine kinase 2;microtubule associated serine/threonine kinase family member 4;vacuolar protein sorting 33 homolog A (S. cerevisiae);budding uninhibited by benzimidazoles 1 homolog (yeast) 3133 394 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1615.[MT7]-EFLDK[MT7].2y4_1.heavy 470.273 / 666.394 31808.0 25.180700302124023 47 17 10 10 10 2.705142861476785 36.96662435987142 0.0 3 0.9700120279669372 7.108819770424696 31808.0 37.45576650366017 0.0 - - - - - - - 289.0 63 4 MAST1;MAST2;MAST4;VPS33A;BUB1 microtubule associated serine/threonine kinase 1;microtubule associated serine/threonine kinase 2;microtubule associated serine/threonine kinase family member 4;vacuolar protein sorting 33 homolog A (S. cerevisiae);budding uninhibited by benzimidazoles 1 homolog (yeast) 3135 394 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1615.[MT7]-EFLDK[MT7].2b4_1.heavy 470.273 / 649.331 26892.0 25.180700302124023 47 17 10 10 10 2.705142861476785 36.96662435987142 0.0 3 0.9700120279669372 7.108819770424696 26892.0 100.60749235926919 0.0 - - - - - - - 289.0 53 6 MAST1;MAST2;MAST4;VPS33A;BUB1 microtubule associated serine/threonine kinase 1;microtubule associated serine/threonine kinase 2;microtubule associated serine/threonine kinase family member 4;vacuolar protein sorting 33 homolog A (S. cerevisiae);budding uninhibited by benzimidazoles 1 homolog (yeast) 3137 394 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1615.[MT7]-EFLDK[MT7].2y3_1.heavy 470.273 / 519.326 13012.0 25.180700302124023 47 17 10 10 10 2.705142861476785 36.96662435987142 0.0 3 0.9700120279669372 7.108819770424696 13012.0 17.881659464131374 0.0 - - - - - - - 650.25 26 8 MAST1;MAST2;MAST4;VPS33A;BUB1 microtubule associated serine/threonine kinase 1;microtubule associated serine/threonine kinase 2;microtubule associated serine/threonine kinase family member 4;vacuolar protein sorting 33 homolog A (S. cerevisiae);budding uninhibited by benzimidazoles 1 homolog (yeast) 3139 395 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1614.[MT7]-LFENLR.2b3_1.heavy 468.275 / 534.304 13952.0 31.870899200439453 48 18 10 10 10 7.566702661962312 13.21579616213788 0.0 3 0.9893562104991137 11.951660987395297 13952.0 70.62123456790123 0.0 - - - - - - - 324.0 27 5 HDAC1;HDAC2;PGM2 histone deacetylase 1;histone deacetylase 2;phosphoglucomutase 2 3141 395 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1614.[MT7]-LFENLR.2y4_1.heavy 468.275 / 531.289 13303.0 31.870899200439453 48 18 10 10 10 7.566702661962312 13.21579616213788 0.0 3 0.9893562104991137 11.951660987395297 13303.0 29.516671802773498 0.0 - - - - - - - 324.0 26 2 HDAC1;HDAC2;PGM2 histone deacetylase 1;histone deacetylase 2;phosphoglucomutase 2 3143 395 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1614.[MT7]-LFENLR.2y5_1.heavy 468.275 / 678.357 72029.0 31.870899200439453 48 18 10 10 10 7.566702661962312 13.21579616213788 0.0 3 0.9893562104991137 11.951660987395297 72029.0 308.8591572029143 0.0 - - - - - - - 324.0 144 2 HDAC1;HDAC2;PGM2 histone deacetylase 1;histone deacetylase 2;phosphoglucomutase 2 3145 395 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1614.[MT7]-LFENLR.2b4_1.heavy 468.275 / 648.347 21739.0 31.870899200439453 48 18 10 10 10 7.566702661962312 13.21579616213788 0.0 3 0.9893562104991137 11.951660987395297 21739.0 99.75338940249958 0.0 - - - - - - - 324.0 43 7 HDAC1;HDAC2;PGM2 histone deacetylase 1;histone deacetylase 2;phosphoglucomutase 2 3147 396 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A9797.[MT7]-NLLAAFSK[MT7].2y4_1.heavy 576.355 / 596.352 7982.0 36.30910110473633 38 15 10 5 8 8.194862579126445 12.202767164725266 0.0410003662109375 4 0.9509207057988363 5.547799722212782 7982.0 16.646951871657755 0.0 - - - - - - - 374.0 15 6 STAG1 stromal antigen 1 3149 396 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A9797.[MT7]-NLLAAFSK[MT7].2y5_1.heavy 576.355 / 667.39 8731.0 36.30910110473633 38 15 10 5 8 8.194862579126445 12.202767164725266 0.0410003662109375 4 0.9509207057988363 5.547799722212782 8731.0 19.60411861155466 0.0 - - - - - - - 841.75 17 8 STAG1 stromal antigen 1 3151 396 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A9797.[MT7]-NLLAAFSK[MT7].2y3_1.heavy 576.355 / 525.315 1996.0 36.30910110473633 38 15 10 5 8 8.194862579126445 12.202767164725266 0.0410003662109375 4 0.9509207057988363 5.547799722212782 1996.0 1.4000000000000001 4.0 - - - - - - - 324.0 4 10 STAG1 stromal antigen 1 3153 396 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A9797.[MT7]-NLLAAFSK[MT7].2y6_1.heavy 576.355 / 780.474 4740.0 36.30910110473633 38 15 10 5 8 8.194862579126445 12.202767164725266 0.0410003662109375 4 0.9509207057988363 5.547799722212782 4740.0 25.493174300408043 1.0 - - - - - - - 304.55555555555554 10 9 STAG1 stromal antigen 1 3155 397 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2027.[MT7]-YMDQWVPVINLPER.3y6_1.heavy 635.333 / 741.425 9777.0 41.085201263427734 46 16 10 10 10 2.2849530540197676 43.76457530454579 0.0 3 0.9640255019064246 6.487156339765727 9777.0 53.476824728260866 0.0 - - - - - - - 287.5 19 10 GADD45A growth arrest and DNA-damage-inducible, alpha 3157 397 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2027.[MT7]-YMDQWVPVINLPER.3b4_1.heavy 635.333 / 682.299 27029.0 41.085201263427734 46 16 10 10 10 2.2849530540197676 43.76457530454579 0.0 3 0.9640255019064246 6.487156339765727 27029.0 112.80749063457827 0.0 - - - - - - - 335.25 54 4 GADD45A growth arrest and DNA-damage-inducible, alpha 3159 397 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2027.[MT7]-YMDQWVPVINLPER.3b3_1.heavy 635.333 / 554.24 10160.0 41.085201263427734 46 16 10 10 10 2.2849530540197676 43.76457530454579 0.0 3 0.9640255019064246 6.487156339765727 10160.0 30.76681729233553 0.0 - - - - - - - 306.6 20 10 GADD45A growth arrest and DNA-damage-inducible, alpha 3161 397 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2027.[MT7]-YMDQWVPVINLPER.3y8_1.heavy 635.333 / 937.547 28179.0 41.085201263427734 46 16 10 10 10 2.2849530540197676 43.76457530454579 0.0 3 0.9640255019064246 6.487156339765727 28179.0 98.5758887913789 0.0 - - - - - - - 255.66666666666666 56 6 GADD45A growth arrest and DNA-damage-inducible, alpha 3163 398 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2178.[MT7]-IIDFIYTAK[MT7].3y3_1.heavy 457.942 / 463.3 2153.0 39.10219955444336 46 16 10 10 10 1.5256165335365128 41.99939271904014 0.0 3 0.9682220674546046 6.904666536260296 2153.0 4.562325357545631 2.0 - - - - - - - 344.6 6 5 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 3165 398 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2178.[MT7]-IIDFIYTAK[MT7].3b4_1.heavy 457.942 / 633.373 2799.0 39.10219955444336 46 16 10 10 10 1.5256165335365128 41.99939271904014 0.0 3 0.9682220674546046 6.904666536260296 2799.0 24.995720930232558 0.0 - - - - - - - 287.0 5 3 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 3167 398 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2178.[MT7]-IIDFIYTAK[MT7].3y4_1.heavy 457.942 / 626.363 3015.0 39.10219955444336 46 16 10 10 10 1.5256165335365128 41.99939271904014 0.0 3 0.9682220674546046 6.904666536260296 3015.0 27.485581395348838 0.0 - - - - - - - 287.0 6 6 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 3169 398 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2178.[MT7]-IIDFIYTAK[MT7].3b3_1.heavy 457.942 / 486.304 6030.0 39.10219955444336 46 16 10 10 10 1.5256165335365128 41.99939271904014 0.0 3 0.9682220674546046 6.904666536260296 6030.0 25.169303944315544 0.0 - - - - - - - 296.0 12 8 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 3171 399 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2028.[MT7]-LQAIGELESIGELFSR.3b6_1.heavy 636.018 / 756.437 23220.0 48.64510154724121 44 18 10 6 10 9.79454113221949 10.209768752825639 0.035999298095703125 3 0.9892514598525313 11.893176301592963 23220.0 111.68605990783409 0.0 - - - - - - - 222.125 46 16 ATM;LOC651610 ataxia telangiectasia mutated;serine-protein kinase ATM-like 3173 399 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2028.[MT7]-LQAIGELESIGELFSR.3y6_1.heavy 636.018 / 708.367 33136.0 48.64510154724121 44 18 10 6 10 9.79454113221949 10.209768752825639 0.035999298095703125 3 0.9892514598525313 11.893176301592963 33136.0 233.9688246568246 0.0 - - - - - - - 179.13333333333333 66 15 ATM;LOC651610 ataxia telangiectasia mutated;serine-protein kinase ATM-like 3175 399 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2028.[MT7]-LQAIGELESIGELFSR.3b4_1.heavy 636.018 / 570.373 12312.0 48.64510154724121 44 18 10 6 10 9.79454113221949 10.209768752825639 0.035999298095703125 3 0.9892514598525313 11.893176301592963 12312.0 104.26445520581115 0.0 - - - - - - - 178.94444444444446 24 18 ATM;LOC651610 ataxia telangiectasia mutated;serine-protein kinase ATM-like 3177 399 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2028.[MT7]-LQAIGELESIGELFSR.3b5_1.heavy 636.018 / 627.395 5454.0 48.64510154724121 44 18 10 6 10 9.79454113221949 10.209768752825639 0.035999298095703125 3 0.9892514598525313 11.893176301592963 5454.0 40.35436227505583 0.0 - - - - - - - 170.5625 10 16 ATM;LOC651610 ataxia telangiectasia mutated;serine-protein kinase ATM-like 3179 400 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2029.[MT7]-LIILASGGPQALVNIMR.3y7_1.heavy 637.384 / 816.476 9047.0 45.482224464416504 44 18 10 6 10 3.394115121801587 23.56382617300035 0.039897918701171875 3 0.9862517088055078 10.513303032030631 9047.0 27.12287356321839 0.0 - - - - - - - 281.5833333333333 18 12 CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 3181 400 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2029.[MT7]-LIILASGGPQALVNIMR.3y6_1.heavy 637.384 / 745.439 10899.0 45.482224464416504 44 18 10 6 10 3.394115121801587 23.56382617300035 0.039897918701171875 3 0.9862517088055078 10.513303032030631 10899.0 65.66064220183486 0.0 - - - - - - - 250.7 21 10 CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 3183 400 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2029.[MT7]-LIILASGGPQALVNIMR.3b4_1.heavy 637.384 / 597.446 8611.0 45.482224464416504 44 18 10 6 10 3.394115121801587 23.56382617300035 0.039897918701171875 3 0.9862517088055078 10.513303032030631 8611.0 27.73777777777778 0.0 - - - - - - - 249.14285714285714 17 7 CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 3185 400 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2029.[MT7]-LIILASGGPQALVNIMR.3y5_1.heavy 637.384 / 632.355 8175.0 45.482224464416504 44 18 10 6 10 3.394115121801587 23.56382617300035 0.039897918701171875 3 0.9862517088055078 10.513303032030631 8175.0 6.475 1.0 - - - - - - - 186.85714285714286 16 7 CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 3187 401 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2023.[MT7]-ATLNPVWNETFVFNLK[MT7]PGDVER.3y8_1.heavy 945.508 / 1057.61 1414.0 40.64402484893799 39 17 10 2 10 3.146401961991951 31.78233461839413 0.08190155029296875 3 0.9772678361285666 8.169882790148309 1414.0 9.146666666666667 1.0 - - - - - - - 202.0 2 3 PRKCG protein kinase C, gamma 3189 401 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2023.[MT7]-ATLNPVWNETFVFNLK[MT7]PGDVER.3y6_1.heavy 945.508 / 672.331 12929.0 40.64402484893799 39 17 10 2 10 3.146401961991951 31.78233461839413 0.08190155029296875 3 0.9772678361285666 8.169882790148309 12929.0 29.86897689768977 0.0 - - - - - - - 291.77777777777777 25 9 PRKCG protein kinase C, gamma 3191 401 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2023.[MT7]-ATLNPVWNETFVFNLK[MT7]PGDVER.3b6_1.heavy 945.508 / 740.442 3232.0 40.64402484893799 39 17 10 2 10 3.146401961991951 31.78233461839413 0.08190155029296875 3 0.9772678361285666 8.169882790148309 3232.0 10.56 0.0 - - - - - - - 317.42857142857144 6 7 PRKCG protein kinase C, gamma 3193 401 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2023.[MT7]-ATLNPVWNETFVFNLK[MT7]PGDVER.3b4_1.heavy 945.508 / 544.321 14949.0 40.64402484893799 39 17 10 2 10 3.146401961991951 31.78233461839413 0.08190155029296875 3 0.9772678361285666 8.169882790148309 14949.0 41.81279702970296 0.0 - - - - - - - 732.25 29 8 PRKCG protein kinase C, gamma 3195 402 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2024.[MT7]-AC[CAM]QEQIEALLESSLR.3y6_1.heavy 630.995 / 704.394 48954.0 40.674800872802734 43 13 10 10 10 1.1344783384759867 53.155952953448804 0.0 3 0.9021988082360414 3.9136818747784163 48954.0 60.65453533323024 0.0 - - - - - - - 247.5 97 4 CCND1 cyclin D1 3197 402 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2024.[MT7]-AC[CAM]QEQIEALLESSLR.3b4_1.heavy 630.995 / 633.278 21207.0 40.674800872802734 43 13 10 10 10 1.1344783384759867 53.155952953448804 0.0 3 0.9021988082360414 3.9136818747784163 21207.0 68.89108660193185 0.0 - - - - - - - 226.28571428571428 42 7 CCND1 cyclin D1 3199 402 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2024.[MT7]-AC[CAM]QEQIEALLESSLR.3b5_1.heavy 630.995 / 761.337 46774.0 40.674800872802734 43 13 10 10 10 1.1344783384759867 53.155952953448804 0.0 3 0.9021988082360414 3.9136818747784163 46774.0 110.87498500964725 0.0 - - - - - - - 264.0 93 6 CCND1 cyclin D1 3201 402 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2024.[MT7]-AC[CAM]QEQIEALLESSLR.3y5_1.heavy 630.995 / 591.31 48161.0 40.674800872802734 43 13 10 10 10 1.1344783384759867 53.155952953448804 0.0 3 0.9021988082360414 3.9136818747784163 48161.0 84.19363990197492 0.0 - - - - - - - 644.5 96 8 CCND1 cyclin D1 3203 403 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2026.[MT7]-LLELFEDDSDPPPK[MT7].3b4_1.heavy 635.003 / 613.404 11972.0 40.22990036010742 34 11 10 5 8 0.7890554622187996 72.67283310683169 0.044403076171875 4 0.8703379932729775 3.389593843299996 11972.0 12.029484858121492 0.0 - - - - - - - 284.2 23 5 ORC1 origin recognition complex, subunit 1 3205 403 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2026.[MT7]-LLELFEDDSDPPPK[MT7].3y4_1.heavy 635.003 / 582.373 17248.0 40.22990036010742 34 11 10 5 8 0.7890554622187996 72.67283310683169 0.044403076171875 4 0.8703379932729775 3.389593843299996 17248.0 33.48740756232952 0.0 - - - - - - - 290.0 34 7 ORC1 origin recognition complex, subunit 1 3207 403 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2026.[MT7]-LLELFEDDSDPPPK[MT7].3b3_1.heavy 635.003 / 500.32 8320.0 40.22990036010742 34 11 10 5 8 0.7890554622187996 72.67283310683169 0.044403076171875 4 0.8703379932729775 3.389593843299996 8320.0 8.363325638129123 1.0 - - - - - - - 304.5 19 2 ORC1 origin recognition complex, subunit 1 3209 403 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2026.[MT7]-LLELFEDDSDPPPK[MT7].3b8_1.heavy 635.003 / 1119.57 1218.0 40.22990036010742 34 11 10 5 8 0.7890554622187996 72.67283310683169 0.044403076171875 4 0.8703379932729775 3.389593843299996 1218.0 11.58 0.0 - - - - - - - 203.0 2 5 ORC1 origin recognition complex, subunit 1 3211 404 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6952.[MT7]-ILEC[CAM]PIC[CAM]LELIK[MT7].3y3_1.heavy 597.012 / 517.383 17171.0 40.5099983215332 46 16 10 10 10 4.3992927886216995 22.730926265839663 0.0 3 0.9677704167629787 6.855855310009809 17171.0 34.0019801980198 0.0 - - - - - - - 721.4285714285714 34 7 BRCA1 breast cancer 1, early onset 3213 404 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6952.[MT7]-ILEC[CAM]PIC[CAM]LELIK[MT7].3b4_1.heavy 597.012 / 660.351 26463.0 40.5099983215332 46 16 10 10 10 4.3992927886216995 22.730926265839663 0.0 3 0.9677704167629787 6.855855310009809 26463.0 43.66831683168317 0.0 - - - - - - - 269.3333333333333 52 9 BRCA1 breast cancer 1, early onset 3215 404 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6952.[MT7]-ILEC[CAM]PIC[CAM]LELIK[MT7].3y4_1.heavy 597.012 / 646.426 13333.0 40.5099983215332 46 16 10 10 10 4.3992927886216995 22.730926265839663 0.0 3 0.9677704167629787 6.855855310009809 13333.0 88.44663366336633 0.0 - - - - - - - 224.44444444444446 26 9 BRCA1 breast cancer 1, early onset 3217 404 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6952.[MT7]-ILEC[CAM]PIC[CAM]LELIK[MT7].3b3_1.heavy 597.012 / 500.32 7878.0 40.5099983215332 46 16 10 10 10 4.3992927886216995 22.730926265839663 0.0 3 0.9677704167629787 6.855855310009809 7878.0 8.775 1.0 - - - - - - - 303.0 16 8 BRCA1 breast cancer 1, early onset 3219 405 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6902.[MT7]-LRDTPDGTFLVR.3y7_1.heavy 511.955 / 807.436 15000.0 29.193199157714844 48 20 10 10 8 18.093430160749467 5.526867990843026 0.0 4 0.9964632249968414 20.7458183213294 15000.0 31.717074695960342 1.0 - - - - - - - 333.0 31 6 PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) 3221 405 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6902.[MT7]-LRDTPDGTFLVR.3y6_1.heavy 511.955 / 692.409 40333.0 29.193199157714844 48 20 10 10 8 18.093430160749467 5.526867990843026 0.0 4 0.9964632249968414 20.7458183213294 40333.0 134.94847639752913 0.0 - - - - - - - 333.0 80 4 PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) 3223 405 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6902.[MT7]-LRDTPDGTFLVR.3b3_1.heavy 511.955 / 529.321 13333.0 29.193199157714844 48 20 10 10 8 18.093430160749467 5.526867990843026 0.0 4 0.9964632249968414 20.7458183213294 13333.0 21.67092601869431 1.0 - - - - - - - 333.0 26 3 PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) 3225 405 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6902.[MT7]-LRDTPDGTFLVR.3y4_1.heavy 511.955 / 534.34 23667.0 29.193199157714844 48 20 10 10 8 18.093430160749467 5.526867990843026 0.0 4 0.9964632249968414 20.7458183213294 23667.0 18.933600000000002 0.0 - - - - - - - 333.0 47 4 PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) 3227 406 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6947.[MT7]-FSQLVEELLK[MT7].2b3_1.heavy 747.445 / 507.268 7601.0 45.33100128173828 44 14 10 10 10 9.44600637969868 10.586484486705366 0.0 3 0.937854511801668 4.924729425623665 7601.0 29.75782997762863 0.0 - - - - - - - 283.6923076923077 15 13 BRCA1 breast cancer 1, early onset 3229 406 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6947.[MT7]-FSQLVEELLK[MT7].2y5_1.heavy 747.445 / 775.468 8160.0 45.33100128173828 44 14 10 10 10 9.44600637969868 10.586484486705366 0.0 3 0.937854511801668 4.924729425623665 8160.0 21.923496927743642 0.0 - - - - - - - 265.625 16 8 BRCA1 breast cancer 1, early onset 3231 406 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6947.[MT7]-FSQLVEELLK[MT7].2b4_1.heavy 747.445 / 620.352 10843.0 45.33100128173828 44 14 10 10 10 9.44600637969868 10.586484486705366 0.0 3 0.937854511801668 4.924729425623665 10843.0 119.80185634328359 0.0 - - - - - - - 191.78571428571428 21 14 BRCA1 breast cancer 1, early onset 3233 406 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6947.[MT7]-FSQLVEELLK[MT7].2y6_1.heavy 747.445 / 874.537 7713.0 45.33100128173828 44 14 10 10 10 9.44600637969868 10.586484486705366 0.0 3 0.937854511801668 4.924729425623665 7713.0 6.856500790782462 1.0 - - - - - - - 173.0 15 11 BRCA1 breast cancer 1, early onset 3235 407 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2001.[MT7]-TRQGVEDAFYTLVR.3y7_1.heavy 600.324 / 869.488 24057.0 35.06974983215332 42 17 10 5 10 1.8763871274144217 41.99894367011897 0.040897369384765625 3 0.9716064413576174 7.306669568697602 24057.0 125.05754304196716 0.0 - - - - - - - 273.0 48 5 HRAS;NRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog;neuroblastoma RAS viral (v-ras) oncogene homolog 3237 407 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2001.[MT7]-TRQGVEDAFYTLVR.3y6_1.heavy 600.324 / 798.451 34172.0 35.06974983215332 42 17 10 5 10 1.8763871274144217 41.99894367011897 0.040897369384765625 3 0.9716064413576174 7.306669568697602 34172.0 86.83561243144425 0.0 - - - - - - - 273.0 68 4 HRAS;NRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog;neuroblastoma RAS viral (v-ras) oncogene homolog 3239 407 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2001.[MT7]-TRQGVEDAFYTLVR.3b7_1.heavy 600.324 / 930.476 25971.0 35.06974983215332 42 17 10 5 10 1.8763871274144217 41.99894367011897 0.040897369384765625 3 0.9716064413576174 7.306669568697602 25971.0 111.73907487393775 0.0 - - - - - - - 273.0 51 5 HRAS;NRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog;neuroblastoma RAS viral (v-ras) oncogene homolog 3241 407 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2001.[MT7]-TRQGVEDAFYTLVR.3y5_1.heavy 600.324 / 651.382 57683.0 35.06974983215332 42 17 10 5 10 1.8763871274144217 41.99894367011897 0.040897369384765625 3 0.9716064413576174 7.306669568697602 57683.0 150.4871203014224 0.0 - - - - - - - 273.0 115 3 HRAS;NRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog;neuroblastoma RAS viral (v-ras) oncogene homolog 3243 408 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2002.[MT7]-LVVLAIANTMDLPER.2y4_1.heavy 900.014 / 514.298 2382.0 44.375850677490234 26 3 10 3 10 0.4103273158027694 104.06454425910385 0.0792999267578125 3 0.5923900279239203 1.8631270795008268 2382.0 12.952194029318399 0.0 - - - - - - - 193.86666666666667 4 15 ORC1 origin recognition complex, subunit 1 3245 408 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2002.[MT7]-LVVLAIANTMDLPER.2y10_1.heavy 900.014 / 1159.58 1588.0 44.375850677490234 26 3 10 3 10 0.4103273158027694 104.06454425910385 0.0792999267578125 3 0.5923900279239203 1.8631270795008268 1588.0 11.188181818181818 1.0 - - - - - - - 132.0 4 7 ORC1 origin recognition complex, subunit 1 3247 408 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2002.[MT7]-LVVLAIANTMDLPER.2b5_1.heavy 900.014 / 640.451 6880.0 44.375850677490234 26 3 10 3 10 0.4103273158027694 104.06454425910385 0.0792999267578125 3 0.5923900279239203 1.8631270795008268 6880.0 61.34932691756888 0.0 - - - - - - - 585.8571428571429 13 7 ORC1 origin recognition complex, subunit 1 3249 408 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2002.[MT7]-LVVLAIANTMDLPER.2y11_1.heavy 900.014 / 1230.61 2646.0 44.375850677490234 26 3 10 3 10 0.4103273158027694 104.06454425910385 0.0792999267578125 3 0.5923900279239203 1.8631270795008268 2646.0 4.39840329389963 0.0 - - - - - - - 238.1 5 10 ORC1 origin recognition complex, subunit 1 3251 409 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2003.[MT7]-LVVLAIANTMDLPER.3b4_1.heavy 600.345 / 569.414 9508.0 44.366050720214844 41 20 8 5 8 9.170333912157247 10.904728329186414 0.04010009765625 4 0.9926624151014779 14.398587373862965 9508.0 41.86358208955224 0.0 - - - - - - - 216.46153846153845 19 13 ORC1 origin recognition complex, subunit 1 3253 409 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2003.[MT7]-LVVLAIANTMDLPER.3b5_1.heavy 600.345 / 640.451 11115.0 44.366050720214844 41 20 8 5 8 9.170333912157247 10.904728329186414 0.04010009765625 4 0.9926624151014779 14.398587373862965 11115.0 97.79541044776118 0.0 - - - - - - - 234.5 22 4 ORC1 origin recognition complex, subunit 1 3255 409 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2003.[MT7]-LVVLAIANTMDLPER.3y4_1.heavy 600.345 / 514.298 8571.0 44.366050720214844 41 20 8 5 8 9.170333912157247 10.904728329186414 0.04010009765625 4 0.9926624151014779 14.398587373862965 8571.0 22.36913669939508 1.0 - - - - - - - 214.4 29 10 ORC1 origin recognition complex, subunit 1 3257 409 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2003.[MT7]-LVVLAIANTMDLPER.3y5_1.heavy 600.345 / 629.325 5491.0 44.366050720214844 41 20 8 5 8 9.170333912157247 10.904728329186414 0.04010009765625 4 0.9926624151014779 14.398587373862965 5491.0 42.31368869936034 0.0 - - - - - - - 234.5 10 8 ORC1 origin recognition complex, subunit 1 3259 410 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2006.[MT7]-FEDTLEFVGFDAK[MT7].2b3_1.heavy 903.464 / 536.247 6244.0 39.7848014831543 48 18 10 10 10 19.066231474465663 5.244874957797738 0.0 3 0.9878423766511133 11.181422150714006 6244.0 18.011538461538464 0.0 - - - - - - - 277.3333333333333 12 6 CUL4B cullin 4B 3261 410 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2006.[MT7]-FEDTLEFVGFDAK[MT7].2y5_1.heavy 903.464 / 681.369 3746.0 39.7848014831543 48 18 10 10 10 19.066231474465663 5.244874957797738 0.0 3 0.9878423766511133 11.181422150714006 3746.0 8.282116000492701 0.0 - - - - - - - 326.85714285714283 7 7 CUL4B cullin 4B 3263 410 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2006.[MT7]-FEDTLEFVGFDAK[MT7].2b6_1.heavy 903.464 / 879.422 3122.0 39.7848014831543 48 18 10 10 10 19.066231474465663 5.244874957797738 0.0 3 0.9878423766511133 11.181422150714006 3122.0 6.402372349072638 0.0 - - - - - - - 346.6666666666667 6 6 CUL4B cullin 4B 3265 410 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2006.[MT7]-FEDTLEFVGFDAK[MT7].2b7_1.heavy 903.464 / 1026.49 3122.0 39.7848014831543 48 18 10 10 10 19.066231474465663 5.244874957797738 0.0 3 0.9878423766511133 11.181422150714006 3122.0 20.007817307692306 0.0 - - - - - - - 267.42857142857144 6 7 CUL4B cullin 4B 3267 411 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2007.[MT7]-FIFWSSEVAGSLYR.2b3_1.heavy 903.471 / 552.33 10512.0 44.375850677490234 37 14 10 3 10 2.1553972798320378 37.72159901618933 0.0792999267578125 3 0.9323234066624523 4.7169672230563355 10512.0 70.52614454520472 0.0 - - - - - - - 192.71428571428572 21 7 EGF epidermal growth factor 3269 411 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2007.[MT7]-FIFWSSEVAGSLYR.2y5_1.heavy 903.471 / 595.32 3100.0 44.375850677490234 37 14 10 3 10 2.1553972798320378 37.72159901618933 0.0792999267578125 3 0.9323234066624523 4.7169672230563355 3100.0 14.58893698893699 0.0 - - - - - - - 238.69230769230768 6 13 EGF epidermal growth factor 3271 411 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2007.[MT7]-FIFWSSEVAGSLYR.2y10_1.heavy 903.471 / 1068.53 6200.0 44.375850677490234 37 14 10 3 10 2.1553972798320378 37.72159901618933 0.0792999267578125 3 0.9323234066624523 4.7169672230563355 6200.0 12.970564082706314 0.0 - - - - - - - 215.8 12 10 EGF epidermal growth factor 3273 411 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2007.[MT7]-FIFWSSEVAGSLYR.2y7_1.heavy 903.471 / 765.425 1752.0 44.375850677490234 37 14 10 3 10 2.1553972798320378 37.72159901618933 0.0792999267578125 3 0.9323234066624523 4.7169672230563355 1752.0 2.599406528189911 1.0 - - - - - - - 240.85714285714286 3 14 EGF epidermal growth factor 3275 412 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2008.[MT7]-GGQAQSAASGAEQTEK[MT7].3b6_1.heavy 603.306 / 673.339 7240.0 16.386899948120117 42 20 2 10 10 4.41592599845892 17.712100350950724 0.0 3 0.9921420744772772 13.913090729292371 7240.0 56.18051948051948 0.0 - - - - - - - 277.2 14 10 ZBTB17 zinc finger and BTB domain containing 17 3277 412 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2008.[MT7]-GGQAQSAASGAEQTEK[MT7].3y3_1.heavy 603.306 / 521.305 17714.0 16.386899948120117 42 20 2 10 10 4.41592599845892 17.712100350950724 0.0 3 0.9921420744772772 13.913090729292371 17714.0 82.43528138528139 0.0 - - - - - - - 308.0 35 8 ZBTB17 zinc finger and BTB domain containing 17 3279 412 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2008.[MT7]-GGQAQSAASGAEQTEK[MT7].3b5_1.heavy 603.306 / 586.307 N/A 16.386899948120117 42 20 2 10 10 4.41592599845892 17.712100350950724 0.0 3 0.9921420744772772 13.913090729292371 14171.0 3.676927048569526 1.0 - - - - - - - 924.0 85 1 ZBTB17 zinc finger and BTB domain containing 17 3281 412 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2008.[MT7]-GGQAQSAASGAEQTEK[MT7].3b7_1.heavy 603.306 / 744.376 9704.0 16.386899948120117 42 20 2 10 10 4.41592599845892 17.712100350950724 0.0 3 0.9921420744772772 13.913090729292371 9704.0 78.76623376623377 0.0 - - - - - - - 277.2 19 10 ZBTB17 zinc finger and BTB domain containing 17 3283 413 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1793.[MT7]-ITDFGLC[CAM]K[MT7].2y5_1.heavy 621.344 / 768.419 42975.0 31.196800231933594 47 17 10 10 10 2.9643068142005196 29.774174666465818 0.0 3 0.977816467667648 8.270673663574447 42975.0 50.06164901664145 0.0 - - - - - - - 331.0 85 2 AKT3;AKT1;AKT2 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 1;v-akt murine thymoma viral oncogene homolog 2 3285 413 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1793.[MT7]-ITDFGLC[CAM]K[MT7].2y3_1.heavy 621.344 / 564.33 6942.0 31.196800231933594 47 17 10 10 10 2.9643068142005196 29.774174666465818 0.0 3 0.977816467667648 8.270673663574447 6942.0 19.34916739380458 1.0 - - - - - - - 331.0 17 5 AKT3;AKT1;AKT2 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 1;v-akt murine thymoma viral oncogene homolog 2 3287 413 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1793.[MT7]-ITDFGLC[CAM]K[MT7].2y6_1.heavy 621.344 / 883.446 8926.0 31.196800231933594 47 17 10 10 10 2.9643068142005196 29.774174666465818 0.0 3 0.977816467667648 8.270673663574447 8926.0 24.306807866868382 0.0 - - - - - - - 331.0 17 2 AKT3;AKT1;AKT2 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 1;v-akt murine thymoma viral oncogene homolog 2 3289 413 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1793.[MT7]-ITDFGLC[CAM]K[MT7].2y7_1.heavy 621.344 / 984.494 45289.0 31.196800231933594 47 17 10 10 10 2.9643068142005196 29.774174666465818 0.0 3 0.977816467667648 8.270673663574447 45289.0 109.26211608145039 0.0 - - - - - - - 331.0 90 4 AKT3;AKT1;AKT2 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 1;v-akt murine thymoma viral oncogene homolog 2 3291 414 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2009.[MT7]-LLNNAFEELVAFQR.3b4_1.heavy 603.332 / 599.363 66064.0 45.24959945678711 43 13 10 10 10 9.075363878366316 11.018841926369271 0.0 3 0.9256243151981597 4.496945877095514 66064.0 601.0765376160675 0.0 - - - - - - - 176.5 132 4 MCM3 minichromosome maintenance complex component 3 3293 414 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2009.[MT7]-LLNNAFEELVAFQR.3b5_1.heavy 603.332 / 670.4 111321.0 45.24959945678711 43 13 10 10 10 9.075363878366316 11.018841926369271 0.0 3 0.9256243151981597 4.496945877095514 111321.0 57.4436747635593 0.0 - - - - - - - 352.5 222 2 MCM3 minichromosome maintenance complex component 3 3295 414 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2009.[MT7]-LLNNAFEELVAFQR.3y4_1.heavy 603.332 / 521.283 108382.0 45.24959945678711 43 13 10 10 10 9.075363878366316 11.018841926369271 0.0 3 0.9256243151981597 4.496945877095514 108382.0 44.24306844376606 0.0 - - - - - - - 411.5 216 2 MCM3 minichromosome maintenance complex component 3 3297 414 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2009.[MT7]-LLNNAFEELVAFQR.3y5_1.heavy 603.332 / 620.352 91925.0 45.24959945678711 43 13 10 10 10 9.075363878366316 11.018841926369271 0.0 3 0.9256243151981597 4.496945877095514 91925.0 24.693679189570904 1.0 - - - - - - - 353.0 194 1 MCM3 minichromosome maintenance complex component 3 3299 415 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1792.[MT7]-VVPPLDEDGR.2y8_1.heavy 620.836 / 898.427 98498.0 26.45745086669922 43 18 10 5 10 3.9586762806666362 25.26096930137468 0.047100067138671875 3 0.982334197139742 9.271590725726515 98498.0 73.08483466802542 0.0 - - - - - - - 784.0 196 2 CDK2 cyclin-dependent kinase 2 3301 415 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1792.[MT7]-VVPPLDEDGR.2y5_1.heavy 620.836 / 591.237 5333.0 26.45745086669922 43 18 10 5 10 3.9586762806666362 25.26096930137468 0.047100067138671875 3 0.982334197139742 9.271590725726515 5333.0 5.409048048244181 2.0 - - - - - - - 314.0 10 3 CDK2 cyclin-dependent kinase 2 3303 415 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1792.[MT7]-VVPPLDEDGR.2y9_1.heavy 620.836 / 997.495 19449.0 26.45745086669922 43 18 10 5 10 3.9586762806666362 25.26096930137468 0.047100067138671875 3 0.982334197139742 9.271590725726515 19449.0 50.61268596474279 0.0 - - - - - - - 314.0 38 4 CDK2 cyclin-dependent kinase 2 3305 415 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1792.[MT7]-VVPPLDEDGR.2y7_1.heavy 620.836 / 801.374 15684.0 26.45745086669922 43 18 10 5 10 3.9586762806666362 25.26096930137468 0.047100067138671875 3 0.982334197139742 9.271590725726515 15684.0 23.644723505976096 0.0 - - - - - - - 314.0 31 2 CDK2 cyclin-dependent kinase 2 3307 416 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1795.[MT7]-LVVVGAGGVGK[MT7].2y8_1.heavy 622.402 / 788.475 89649.0 28.170499801635742 50 20 10 10 10 10.750765545471555 9.301663177104821 0.0 3 0.9951980096700803 17.80236848712376 89649.0 123.3123795180723 0.0 - - - - - - - 332.0 179 2 HRAS;KRAS;NRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog;v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog;neuroblastoma RAS viral (v-ras) oncogene homolog 3309 416 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1795.[MT7]-LVVVGAGGVGK[MT7].2y5_1.heavy 622.402 / 561.348 65742.0 28.170499801635742 50 20 10 10 10 10.750765545471555 9.301663177104821 0.0 3 0.9951980096700803 17.80236848712376 65742.0 74.1153356282272 0.0 - - - - - - - 332.0 131 2 HRAS;KRAS;NRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog;v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog;neuroblastoma RAS viral (v-ras) oncogene homolog 3311 416 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1795.[MT7]-LVVVGAGGVGK[MT7].2y9_1.heavy 622.402 / 887.543 67070.0 28.170499801635742 50 20 10 10 10 10.750765545471555 9.301663177104821 0.0 3 0.9951980096700803 17.80236848712376 67070.0 219.52630522088353 0.0 - - - - - - - 332.0 134 4 HRAS;KRAS;NRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog;v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog;neuroblastoma RAS viral (v-ras) oncogene homolog 3313 416 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1795.[MT7]-LVVVGAGGVGK[MT7].2y7_1.heavy 622.402 / 689.406 180293.0 28.170499801635742 50 20 10 10 10 10.750765545471555 9.301663177104821 0.0 3 0.9951980096700803 17.80236848712376 180293.0 169.50955464716006 0.0 - - - - - - - 332.0 360 3 HRAS;KRAS;NRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog;v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog;neuroblastoma RAS viral (v-ras) oncogene homolog 3315 417 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1794.[MT7]-LSFSQVFK[MT7].2y5_1.heavy 622.368 / 752.442 20216.0 36.04050064086914 48 18 10 10 10 8.455599491388437 11.826482569549858 0.0 3 0.9876729270468821 11.104148044841015 20216.0 42.11666666666667 0.0 - - - - - - - 256.0 40 3 ANAPC5 anaphase promoting complex subunit 5 3317 417 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1794.[MT7]-LSFSQVFK[MT7].2y3_1.heavy 622.368 / 537.352 17401.0 36.04050064086914 48 18 10 10 10 8.455599491388437 11.826482569549858 0.0 3 0.9876729270468821 11.104148044841015 17401.0 26.373390625 0.0 - - - - - - - 628.3636363636364 34 11 ANAPC5 anaphase promoting complex subunit 5 3319 417 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1794.[MT7]-LSFSQVFK[MT7].2y6_1.heavy 622.368 / 899.511 9212.0 36.04050064086914 48 18 10 10 10 8.455599491388437 11.826482569549858 0.0 3 0.9876729270468821 11.104148044841015 9212.0 14.19915768905788 1.0 - - - - - - - 256.0 18 6 ANAPC5 anaphase promoting complex subunit 5 3321 417 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1794.[MT7]-LSFSQVFK[MT7].2y7_1.heavy 622.368 / 986.543 29685.0 36.04050064086914 48 18 10 10 10 8.455599491388437 11.826482569549858 0.0 3 0.9876729270468821 11.104148044841015 29685.0 104.36699285539814 0.0 - - - - - - - 256.0 59 4 ANAPC5 anaphase promoting complex subunit 5 3323 418 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1797.[MT7]-LQETLSAADR.2y8_1.heavy 624.339 / 862.427 15409.0 25.52869987487793 50 20 10 10 10 10.487342658783886 9.535303961508589 0.0 3 0.992246365513471 14.006469972887626 15409.0 31.963436243351925 0.0 - - - - - - - 296.0 30 4 PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 3325 418 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1797.[MT7]-LQETLSAADR.2y5_1.heavy 624.339 / 519.252 9483.0 25.52869987487793 50 20 10 10 10 10.487342658783886 9.535303961508589 0.0 3 0.992246365513471 14.006469972887626 9483.0 21.078980378368414 3.0 - - - - - - - 296.0 55 2 PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 3327 418 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1797.[MT7]-LQETLSAADR.2y9_1.heavy 624.339 / 990.485 30819.0 25.52869987487793 50 20 10 10 10 10.487342658783886 9.535303961508589 0.0 3 0.992246365513471 14.006469972887626 30819.0 201.98939189189187 0.0 - - - - - - - 296.0 61 4 PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 3329 418 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1797.[MT7]-LQETLSAADR.2y7_1.heavy 624.339 / 733.384 16595.0 25.52869987487793 50 20 10 10 10 10.487342658783886 9.535303961508589 0.0 3 0.992246365513471 14.006469972887626 16595.0 69.31589680935153 0.0 - - - - - - - 296.0 33 3 PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 3331 419 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1796.[MT7]-TDGFDEFK[MT7].2y4_1.heavy 623.813 / 682.353 7318.0 28.414100646972656 50 20 10 10 10 6.354092480809562 15.737888660263756 0.0 3 0.9908560749146474 12.896282982166438 7318.0 36.48012012012012 0.0 - - - - - - - 333.0 14 8 PML promyelocytic leukemia 3333 419 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1796.[MT7]-TDGFDEFK[MT7].2y3_1.heavy 623.813 / 567.326 18295.0 28.414100646972656 50 20 10 10 10 6.354092480809562 15.737888660263756 0.0 3 0.9908560749146474 12.896282982166438 18295.0 20.348917920025258 0.0 - - - - - - - 333.0 36 4 PML promyelocytic leukemia 3335 419 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1796.[MT7]-TDGFDEFK[MT7].2y6_1.heavy 623.813 / 886.443 15634.0 28.414100646972656 50 20 10 10 10 6.354092480809562 15.737888660263756 0.0 3 0.9908560749146474 12.896282982166438 15634.0 17.944274501448923 0.0 - - - - - - - 333.0 31 1 PML promyelocytic leukemia 3337 419 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1796.[MT7]-TDGFDEFK[MT7].2b5_1.heavy 623.813 / 680.301 13971.0 28.414100646972656 50 20 10 10 10 6.354092480809562 15.737888660263756 0.0 3 0.9908560749146474 12.896282982166438 13971.0 7.168907504469011 1.0 - - - - - - - 333.0 31 8 PML promyelocytic leukemia 3339 420 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1799.[MT7]-ELIFQETAR.2b3_1.heavy 625.847 / 500.32 49663.0 30.755599975585938 48 18 10 10 10 4.349273176688296 22.99234744232457 0.0 3 0.9848960441256378 10.02925942548235 49663.0 50.296361590397595 0.0 - - - - - - - 667.0 99 2 MAPK3 mitogen-activated protein kinase 3 3341 420 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1799.[MT7]-ELIFQETAR.2y8_1.heavy 625.847 / 977.542 61996.0 30.755599975585938 48 18 10 10 10 4.349273176688296 22.99234744232457 0.0 3 0.9848960441256378 10.02925942548235 61996.0 106.67454405580406 0.0 - - - - - - - 333.0 123 4 MAPK3 mitogen-activated protein kinase 3 3343 420 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1799.[MT7]-ELIFQETAR.2y6_1.heavy 625.847 / 751.373 62662.0 30.755599975585938 48 18 10 10 10 4.349273176688296 22.99234744232457 0.0 3 0.9848960441256378 10.02925942548235 62662.0 23.986017162517037 1.0 - - - - - - - 333.0 133 4 MAPK3 mitogen-activated protein kinase 3 3345 420 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1799.[MT7]-ELIFQETAR.2y7_1.heavy 625.847 / 864.457 40664.0 30.755599975585938 48 18 10 10 10 4.349273176688296 22.99234744232457 0.0 3 0.9848960441256378 10.02925942548235 40664.0 68.42473014253562 0.0 - - - - - - - 333.0 81 3 MAPK3 mitogen-activated protein kinase 3 3347 421 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1990.[MT7]-LRYPINEEALEK[MT7].3b6_1.heavy 588.336 / 901.538 9667.0 28.7106990814209 41 11 10 10 10 1.396040398580315 65.13287914027464 0.0 3 0.8569191005339545 3.222936983179982 9667.0 37.14914882882883 0.0 - - - - - - - 333.0 19 2 PLCG1 phospholipase C, gamma 1 3349 421 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1990.[MT7]-LRYPINEEALEK[MT7].3y3_1.heavy 588.336 / 533.341 56667.0 28.7106990814209 41 11 10 10 10 1.396040398580315 65.13287914027464 0.0 3 0.8569191005339545 3.222936983179982 56667.0 118.12287905559597 0.0 - - - - - - - 333.0 113 5 PLCG1 phospholipase C, gamma 1 3351 421 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1990.[MT7]-LRYPINEEALEK[MT7].3y4_1.heavy 588.336 / 604.379 60333.0 28.7106990814209 41 11 10 10 10 1.396040398580315 65.13287914027464 0.0 3 0.8569191005339545 3.222936983179982 60333.0 77.29026037853194 0.0 - - - - - - - 333.0 120 4 PLCG1 phospholipase C, gamma 1 3353 421 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1990.[MT7]-LRYPINEEALEK[MT7].3b7_1.heavy 588.336 / 1030.58 6333.0 28.7106990814209 41 11 10 10 10 1.396040398580315 65.13287914027464 0.0 3 0.8569191005339545 3.222936983179982 6333.0 36.039144144144146 0.0 - - - - - - - 333.0 12 5 PLCG1 phospholipase C, gamma 1 3355 422 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1991.[MT7]-LRQEEPQSLQAAVR.3y7_1.heavy 590.331 / 744.436 27268.0 24.138700485229492 44 14 10 10 10 1.6413310955256608 41.84485273896309 0.0 3 0.9456731066522231 5.270707277325511 27268.0 5.515064186533928 1.0 - - - - - - - 273.0 54 3 PML promyelocytic leukemia 3357 422 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1991.[MT7]-LRQEEPQSLQAAVR.3b5_1.heavy 590.331 / 800.438 23177.0 24.138700485229492 44 14 10 10 10 1.6413310955256608 41.84485273896309 0.0 3 0.9456731066522231 5.270707277325511 23177.0 17.190435221276438 0.0 - - - - - - - 623.0 46 7 PML promyelocytic leukemia 3359 422 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1991.[MT7]-LRQEEPQSLQAAVR.3y5_1.heavy 590.331 / 544.32 41174.0 24.138700485229492 44 14 10 10 10 1.6413310955256608 41.84485273896309 0.0 3 0.9456731066522231 5.270707277325511 41174.0 55.74956583197253 0.0 - - - - - - - 273.0 82 2 PML promyelocytic leukemia 3361 422 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1991.[MT7]-LRQEEPQSLQAAVR.3y9_1.heavy 590.331 / 969.548 13906.0 24.138700485229492 44 14 10 10 10 1.6413310955256608 41.84485273896309 0.0 3 0.9456731066522231 5.270707277325511 13906.0 70.84737117316934 0.0 - - - - - - - 273.0 27 4 PML promyelocytic leukemia 3363 423 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1992.[MT7]-EDGSLEIGDTTTFSR.2b4_1.heavy 886.427 / 533.232 3333.0 29.38629913330078 37 7 10 10 10 2.488722822881274 34.90218641598463 0.0 3 0.74769585281332 2.403336474052982 3333.0 5.496701649175412 0.0 - - - - - - - 333.0 6 3 UBA7 ubiquitin-like modifier activating enzyme 7 3365 423 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1992.[MT7]-EDGSLEIGDTTTFSR.2b6_1.heavy 886.427 / 775.359 6333.0 29.38629913330078 37 7 10 10 10 2.488722822881274 34.90218641598463 0.0 3 0.74769585281332 2.403336474052982 6333.0 14.498297361319338 0.0 - - - - - - - 333.0 12 5 UBA7 ubiquitin-like modifier activating enzyme 7 3367 423 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1992.[MT7]-EDGSLEIGDTTTFSR.2y6_1.heavy 886.427 / 712.362 1333.0 29.38629913330078 37 7 10 10 10 2.488722822881274 34.90218641598463 0.0 3 0.74769585281332 2.403336474052982 1333.0 3.562822822822823 9.0 - - - - - - - 333.0 4 4 UBA7 ubiquitin-like modifier activating enzyme 7 3369 423 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1992.[MT7]-EDGSLEIGDTTTFSR.2y10_1.heavy 886.427 / 1126.54 3667.0 29.38629913330078 37 7 10 10 10 2.488722822881274 34.90218641598463 0.0 3 0.74769585281332 2.403336474052982 3667.0 14.59466 0.0 - - - - - - - 333.0 7 5 UBA7 ubiquitin-like modifier activating enzyme 7 3371 424 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1993.[MT7]-VLVVGAGGIGC[CAM]ELLK[MT7].2b4_1.heavy 887.031 / 555.399 9636.0 37.54492473602295 40 14 10 6 10 2.2956923753848004 34.67220031831528 0.039699554443359375 3 0.9409570915345347 5.053801153592587 9636.0 17.702903829787232 0.0 - - - - - - - 274.1666666666667 19 6 UBA2 ubiquitin-like modifier activating enzyme 2 3373 424 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1993.[MT7]-VLVVGAGGIGC[CAM]ELLK[MT7].2y9_1.heavy 887.031 / 1090.6 7286.0 37.54492473602295 40 14 10 6 10 2.2956923753848004 34.67220031831528 0.039699554443359375 3 0.9409570915345347 5.053801153592587 7286.0 19.325985815602834 0.0 - - - - - - - 287.22222222222223 14 9 UBA2 ubiquitin-like modifier activating enzyme 2 3375 424 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1993.[MT7]-VLVVGAGGIGC[CAM]ELLK[MT7].2y6_1.heavy 887.031 / 863.478 3525.0 37.54492473602295 40 14 10 6 10 2.2956923753848004 34.67220031831528 0.039699554443359375 3 0.9409570915345347 5.053801153592587 3525.0 4.5 0.0 - - - - - - - 365.55555555555554 7 9 UBA2 ubiquitin-like modifier activating enzyme 2 3377 424 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1993.[MT7]-VLVVGAGGIGC[CAM]ELLK[MT7].2y11_1.heavy 887.031 / 1218.66 10341.0 37.54492473602295 40 14 10 6 10 2.2956923753848004 34.67220031831528 0.039699554443359375 3 0.9409570915345347 5.053801153592587 10341.0 50.164851063829786 0.0 - - - - - - - 282.0 20 5 UBA2 ubiquitin-like modifier activating enzyme 2 3379 425 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1995.[MT7]-YLQLAEELIRPER.3y10_2.heavy 592.004 / 613.349 26928.0 41.537349700927734 39 13 10 6 10 1.6362634677094325 52.99786113683172 0.03749847412109375 3 0.9165746460847144 4.242743789646984 26928.0 90.0244575389948 0.0 - - - - - - - 741.8571428571429 53 7 MCM6 minichromosome maintenance complex component 6 3381 425 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1995.[MT7]-YLQLAEELIRPER.3y11_2.heavy 592.004 / 677.378 41161.0 41.537349700927734 39 13 10 6 10 1.6362634677094325 52.99786113683172 0.03749847412109375 3 0.9165746460847144 4.242743789646984 41161.0 83.73987874523397 0.0 - - - - - - - 649.125 82 8 MCM6 minichromosome maintenance complex component 6 3383 425 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1995.[MT7]-YLQLAEELIRPER.3b4_1.heavy 592.004 / 662.399 23081.0 41.537349700927734 39 13 10 6 10 1.6362634677094325 52.99786113683172 0.03749847412109375 3 0.9165746460847144 4.242743789646984 23081.0 178.36567153679653 0.0 - - - - - - - 297.27272727272725 46 11 MCM6 minichromosome maintenance complex component 6 3385 425 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1995.[MT7]-YLQLAEELIRPER.3b3_1.heavy 592.004 / 549.315 42892.0 41.537349700927734 39 13 10 6 10 1.6362634677094325 52.99786113683172 0.03749847412109375 3 0.9165746460847144 4.242743789646984 42892.0 98.13329755683462 0.0 - - - - - - - 796.8571428571429 85 7 MCM6 minichromosome maintenance complex component 6 3387 426 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1996.[MT7]-NPVDYIQGLLDLK[MT7].3y3_1.heavy 592.676 / 519.326 17693.0 47.082475662231445 39 13 10 6 10 1.1577611240046763 54.11687176448415 0.03929901123046875 3 0.9243424514894895 4.458197538152122 17693.0 50.92414517448201 0.0 - - - - - - - 655.25 35 8 CUL3 cullin 3 3389 426 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1996.[MT7]-NPVDYIQGLLDLK[MT7].3b4_1.heavy 592.676 / 570.3 16164.0 47.082475662231445 39 13 10 6 10 1.1577611240046763 54.11687176448415 0.03929901123046875 3 0.9243424514894895 4.458197538152122 16164.0 142.4064464141821 0.0 - - - - - - - 300.25 32 8 CUL3 cullin 3 3391 426 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1996.[MT7]-NPVDYIQGLLDLK[MT7].3b5_1.heavy 592.676 / 733.364 20606.0 47.082475662231445 39 13 10 6 10 1.1577611240046763 54.11687176448415 0.03929901123046875 3 0.9243424514894895 4.458197538152122 20606.0 31.42808244274809 1.0 - - - - - - - 218.57142857142858 41 7 CUL3 cullin 3 3393 426 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1996.[MT7]-NPVDYIQGLLDLK[MT7].3y4_1.heavy 592.676 / 632.41 14344.0 47.082475662231445 39 13 10 6 10 1.1577611240046763 54.11687176448415 0.03929901123046875 3 0.9243424514894895 4.458197538152122 14344.0 11.238836833602583 1.0 - - - - - - - 210.44444444444446 28 9 CUL3 cullin 3 3395 427 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1998.[MT7]-NLFDNLIEFLQK[MT7].4y4_1.heavy 446.256 / 679.426 N/A N/A - - - - - - - - - 0.0 - - - - - - - ORC3 origin recognition complex, subunit 3 3397 427 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1998.[MT7]-NLFDNLIEFLQK[MT7].4y3_1.heavy 446.256 / 532.357 N/A N/A - - - - - - - - - 0.0 - - - - - - - ORC3 origin recognition complex, subunit 3 3399 427 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1998.[MT7]-NLFDNLIEFLQK[MT7].4b3_1.heavy 446.256 / 519.305 N/A N/A - - - - - - - - - 0.0 - - - - - - - ORC3 origin recognition complex, subunit 3 3401 427 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1998.[MT7]-NLFDNLIEFLQK[MT7].4b6_1.heavy 446.256 / 861.459 N/A N/A - - - - - - - - - 0.0 - - - - - - - ORC3 origin recognition complex, subunit 3 3403 428 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2011.[MT7]-LQPFATEADVEEALR.2y8_1.heavy 916.979 / 902.458 6444.0 37.942100524902344 47 17 10 10 10 3.8439837119593414 26.014678389214186 0.0 3 0.9784006674948464 8.382187760170295 6444.0 10.299934672300251 0.0 - - - - - - - 230.0 12 4 MCM5 minichromosome maintenance complex component 5 3405 428 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2011.[MT7]-LQPFATEADVEEALR.2y6_1.heavy 916.979 / 716.394 9666.0 37.942100524902344 47 17 10 10 10 3.8439837119593414 26.014678389214186 0.0 3 0.9784006674948464 8.382187760170295 9666.0 13.436663770634233 0.0 - - - - - - - 306.6666666666667 19 6 MCM5 minichromosome maintenance complex component 5 3407 428 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2011.[MT7]-LQPFATEADVEEALR.2y10_1.heavy 916.979 / 1132.55 7364.0 37.942100524902344 47 17 10 10 10 3.8439837119593414 26.014678389214186 0.0 3 0.9784006674948464 8.382187760170295 7364.0 9.84389868963282 1.0 - - - - - - - 276.0 15 5 MCM5 minichromosome maintenance complex component 5 3409 428 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2011.[MT7]-LQPFATEADVEEALR.2y11_1.heavy 916.979 / 1203.59 6444.0 37.942100524902344 47 17 10 10 10 3.8439837119593414 26.014678389214186 0.0 3 0.9784006674948464 8.382187760170295 6444.0 49.31060869565217 0.0 - - - - - - - 332.22222222222223 12 9 MCM5 minichromosome maintenance complex component 5 3411 429 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2010.[MT7]-GDINILLIGDPSVAK[MT7].2y5_1.heavy 907.037 / 645.405 N/A N/A - - - - - - - - - 0.0 - - - - - - - MCM3 minichromosome maintenance complex component 3 3413 429 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2010.[MT7]-GDINILLIGDPSVAK[MT7].2y9_1.heavy 907.037 / 1043.62 N/A N/A - - - - - - - - - 0.0 - - - - - - - MCM3 minichromosome maintenance complex component 3 3415 429 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2010.[MT7]-GDINILLIGDPSVAK[MT7].2b4_1.heavy 907.037 / 544.285 N/A N/A - - - - - - - - - 0.0 - - - - - - - MCM3 minichromosome maintenance complex component 3 3417 429 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2010.[MT7]-GDINILLIGDPSVAK[MT7].2b5_1.heavy 907.037 / 657.369 N/A N/A - - - - - - - - - 0.0 - - - - - - - MCM3 minichromosome maintenance complex component 3 3419 430 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2014.[MT7]-NAAGELPTVEC[CAM]YNPR.3b6_1.heavy 612.301 / 700.375 N/A N/A - - - - - - - - - 0.0 - - - - - - - KLHL13 kelch-like 13 (Drosophila) 3421 430 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2014.[MT7]-NAAGELPTVEC[CAM]YNPR.3y6_1.heavy 612.301 / 838.351 N/A N/A - - - - - - - - - 0.0 - - - - - - - KLHL13 kelch-like 13 (Drosophila) 3423 430 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2014.[MT7]-NAAGELPTVEC[CAM]YNPR.3b5_1.heavy 612.301 / 587.291 N/A N/A - - - - - - - - - 0.0 - - - - - - - KLHL13 kelch-like 13 (Drosophila) 3425 430 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2014.[MT7]-NAAGELPTVEC[CAM]YNPR.3y5_1.heavy 612.301 / 709.309 N/A N/A - - - - - - - - - 0.0 - - - - - - - KLHL13 kelch-like 13 (Drosophila) 3427 431 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2015.[MT7]-ELRDEEQTAESIK[MT7].3b6_1.heavy 612.658 / 916.449 8984.0 23.76959991455078 45 15 10 10 10 5.589782128094666 17.889784916194223 0.0 3 0.9551729926303087 5.807064541416298 8984.0 42.87818181818182 0.0 - - - - - - - 264.0 17 6 MCM6 minichromosome maintenance complex component 6 3429 431 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2015.[MT7]-ELRDEEQTAESIK[MT7].3y4_1.heavy 612.658 / 620.374 36464.0 23.76959991455078 45 15 10 10 10 5.589782128094666 17.889784916194223 0.0 3 0.9551729926303087 5.807064541416298 36464.0 76.80139269697841 0.0 - - - - - - - 679.4285714285714 72 7 MCM6 minichromosome maintenance complex component 6 3431 431 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2015.[MT7]-ELRDEEQTAESIK[MT7].3y5_1.heavy 612.658 / 691.411 25630.0 23.76959991455078 45 15 10 10 10 5.589782128094666 17.889784916194223 0.0 3 0.9551729926303087 5.807064541416298 25630.0 53.382056133711764 0.0 - - - - - - - 603.7142857142857 51 7 MCM6 minichromosome maintenance complex component 6 3433 431 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2015.[MT7]-ELRDEEQTAESIK[MT7].3b7_2.heavy 612.658 / 522.758 40163.0 23.76959991455078 45 15 10 10 10 5.589782128094666 17.889784916194223 0.0 3 0.9551729926303087 5.807064541416298 40163.0 118.60201889640413 0.0 - - - - - - - 675.2222222222222 80 9 MCM6 minichromosome maintenance complex component 6 3435 432 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2012.[MT7]-LSQYLIQLVQVLK[MT7].3y3_1.heavy 611.72 / 503.367 6992.0 50.71160125732422 44 14 10 10 10 1.8618199714553012 45.312245313730436 0.0 3 0.9484096491795342 5.409948079368953 6992.0 442.68100000000004 0.0 - - - - - - - 116.10526315789474 13 19 PIK3CA phosphoinositide-3-kinase, catalytic, alpha polypeptide 3437 432 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2012.[MT7]-LSQYLIQLVQVLK[MT7].3b6_1.heavy 611.72 / 862.516 4693.0 50.71160125732422 44 14 10 10 10 1.8618199714553012 45.312245313730436 0.0 3 0.9484096491795342 5.409948079368953 4693.0 206.05203125 0.0 - - - - - - - 62.21052631578947 9 19 PIK3CA phosphoinositide-3-kinase, catalytic, alpha polypeptide 3439 432 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2012.[MT7]-LSQYLIQLVQVLK[MT7].3b4_1.heavy 611.72 / 636.347 8636.0 50.71160125732422 44 14 10 10 10 1.8618199714553012 45.312245313730436 0.0 3 0.9484096491795342 5.409948079368953 8636.0 94.89786363636364 0.0 - - - - - - - 92.23529411764706 17 17 PIK3CA phosphoinositide-3-kinase, catalytic, alpha polypeptide 3441 432 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2012.[MT7]-LSQYLIQLVQVLK[MT7].3b5_1.heavy 611.72 / 749.431 12419.0 50.71160125732422 44 14 10 10 10 1.8618199714553012 45.312245313730436 0.0 3 0.9484096491795342 5.409948079368953 12419.0 272.6482549361208 0.0 - - - - - - - 93.55 24 20 PIK3CA phosphoinositide-3-kinase, catalytic, alpha polypeptide 3443 433 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2013.[MT7]-LVIWGTDVNVAAC[CAM]K[MT7].2y4_1.heavy 917.51 / 593.32 3635.0 37.114749908447266 37 13 10 6 8 2.3012450343336224 43.45473798228413 0.03890228271484375 4 0.9124300838804738 4.139648788806585 3635.0 17.795995701455876 0.0 - - - - - - - 333.125 7 8 MCM4 minichromosome maintenance complex component 4 3445 433 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2013.[MT7]-LVIWGTDVNVAAC[CAM]K[MT7].2y3_1.heavy 917.51 / 522.283 1696.0 37.114749908447266 37 13 10 6 8 2.3012450343336224 43.45473798228413 0.03890228271484375 4 0.9124300838804738 4.139648788806585 1696.0 1.8662998624484182 2.0 - - - - - - - 333.125 3 8 MCM4 minichromosome maintenance complex component 4 3447 433 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2013.[MT7]-LVIWGTDVNVAAC[CAM]K[MT7].2y6_1.heavy 917.51 / 806.431 2423.0 37.114749908447266 37 13 10 6 8 2.3012450343336224 43.45473798228413 0.03890228271484375 4 0.9124300838804738 4.139648788806585 2423.0 7.008677685950413 3.0 - - - - - - - 339.2 5 10 MCM4 minichromosome maintenance complex component 4 3449 433 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2013.[MT7]-LVIWGTDVNVAAC[CAM]K[MT7].2y10_1.heavy 917.51 / 1178.6 3635.0 37.114749908447266 37 13 10 6 8 2.3012450343336224 43.45473798228413 0.03890228271484375 4 0.9124300838804738 4.139648788806585 3635.0 8.24639175257732 0.0 - - - - - - - 323.0 7 9 MCM4 minichromosome maintenance complex component 4 3451 434 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2019.[MT7]-ATQLLEGLVQELQK[MT7].3y3_1.heavy 620.034 / 532.357 261713.0 45.532100677490234 45 15 10 10 10 2.0514868528269665 41.5809545181614 0.0 3 0.9579890877199746 5.999969463925354 261713.0 690.8903669897553 0.0 - - - - - - - 386.0 523 2 STAT5B signal transducer and activator of transcription 5B 3453 434 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2019.[MT7]-ATQLLEGLVQELQK[MT7].3b4_1.heavy 620.034 / 558.337 343622.0 45.532100677490234 45 15 10 10 10 2.0514868528269665 41.5809545181614 0.0 3 0.9579890877199746 5.999969463925354 343622.0 397.07083638018344 0.0 - - - - - - - 283.42857142857144 687 7 STAT5B signal transducer and activator of transcription 5B 3455 434 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2019.[MT7]-ATQLLEGLVQELQK[MT7].3b5_1.heavy 620.034 / 671.421 173961.0 45.532100677490234 45 15 10 10 10 2.0514868528269665 41.5809545181614 0.0 3 0.9579890877199746 5.999969463925354 173961.0 579.6135402248731 0.0 - - - - - - - 236.14285714285714 347 7 STAT5B signal transducer and activator of transcription 5B 3457 434 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2019.[MT7]-ATQLLEGLVQELQK[MT7].3b7_1.heavy 620.034 / 857.485 422555.0 45.532100677490234 45 15 10 10 10 2.0514868528269665 41.5809545181614 0.0 3 0.9579890877199746 5.999969463925354 422555.0 3907.4222187437963 0.0 - - - - - - - 204.28571428571428 845 7 STAT5B signal transducer and activator of transcription 5B 3459 435 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2017.[MT7]-LQYFMEQFYGIIR.3y6_1.heavy 617.991 / 768.44 4399.0 48.826324462890625 46 20 10 6 10 12.951258829573522 7.721257162404571 0.0326995849609375 3 0.9975772211108884 25.067888660387197 4399.0 51.62462809917355 0.0 - - - - - - - 106.82352941176471 8 17 PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 3461 435 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2017.[MT7]-LQYFMEQFYGIIR.3b4_1.heavy 617.991 / 696.384 5853.0 48.826324462890625 46 20 10 6 10 12.951258829573522 7.721257162404571 0.0326995849609375 3 0.9975772211108884 25.067888660387197 5853.0 55.54981168282885 0.0 - - - - - - - 136.77777777777777 11 18 PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 3463 435 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2017.[MT7]-LQYFMEQFYGIIR.3b3_1.heavy 617.991 / 549.315 6014.0 48.826324462890625 46 20 10 6 10 12.951258829573522 7.721257162404571 0.0326995849609375 3 0.9975772211108884 25.067888660387197 6014.0 173.0612546583851 0.0 - - - - - - - 108.10526315789474 12 19 PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 3465 435 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2017.[MT7]-LQYFMEQFYGIIR.3y5_1.heavy 617.991 / 621.372 5045.0 48.826324462890625 46 20 10 6 10 12.951258829573522 7.721257162404571 0.0326995849609375 3 0.9975772211108884 25.067888660387197 5045.0 55.150310559006215 0.0 - - - - - - - 117.36363636363636 10 22 PRKDC;LOC731751 protein kinase, DNA-activated, catalytic polypeptide;DNA-dependent protein kinase catalytic subunit-like 3467 436 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2293.[MT7]-TSVVGLFLR.2y8_1.heavy 568.351 / 890.546 51130.0 39.7848014831543 47 17 10 10 10 3.5052487477735097 22.632086020910364 0.0 3 0.9770322431840207 8.127712367175228 51130.0 136.42002730722947 0.0 - - - - - - - 683.1428571428571 102 7 ANAPC5 anaphase promoting complex subunit 5 3469 436 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2293.[MT7]-TSVVGLFLR.2y5_1.heavy 568.351 / 605.377 36581.0 39.7848014831543 47 17 10 10 10 3.5052487477735097 22.632086020910364 0.0 3 0.9770322431840207 8.127712367175228 36581.0 88.2014122615434 0.0 - - - - - - - 267.42857142857144 73 7 ANAPC5 anaphase promoting complex subunit 5 3471 436 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2293.[MT7]-TSVVGLFLR.2y6_1.heavy 568.351 / 704.445 32632.0 39.7848014831543 47 17 10 10 10 3.5052487477735097 22.632086020910364 0.0 3 0.9770322431840207 8.127712367175228 32632.0 185.1691557900583 0.0 - - - - - - - 312.0 65 4 ANAPC5 anaphase promoting complex subunit 5 3473 436 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2293.[MT7]-TSVVGLFLR.2b5_1.heavy 568.351 / 588.347 17459.0 39.7848014831543 47 17 10 10 10 3.5052487477735097 22.632086020910364 0.0 3 0.9770322431840207 8.127712367175228 17459.0 38.51484440166827 0.0 - - - - - - - 286.0 34 8 ANAPC5 anaphase promoting complex subunit 5 3475 437 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2291.[MT7]-RVQDELAR.3b4_1.heavy 377.551 / 643.364 10225.0 19.400800704956055 41 11 10 10 10 1.437568442723759 58.1070794788524 0.0 3 0.8512013255783368 3.158816468716192 10225.0 95.73406862745098 0.0 - - - - - - - 291.85714285714283 20 7 TRIM32 tripartite motif-containing 32 3477 437 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2291.[MT7]-RVQDELAR.3b5_1.heavy 377.551 / 772.407 2658.0 19.400800704956055 41 11 10 10 10 1.437568442723759 58.1070794788524 0.0 3 0.8512013255783368 3.158816468716192 2658.0 19.528189270818352 0.0 - - - - - - - 204.0 5 1 TRIM32 tripartite motif-containing 32 3479 437 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2291.[MT7]-RVQDELAR.3b5_2.heavy 377.551 / 386.707 38240.0 19.400800704956055 41 11 10 10 10 1.437568442723759 58.1070794788524 0.0 3 0.8512013255783368 3.158816468716192 38240.0 66.36327599653586 0.0 - - - - - - - 306.5 76 8 TRIM32 tripartite motif-containing 32 3481 437 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2291.[MT7]-RVQDELAR.3y4_1.heavy 377.551 / 488.283 29038.0 19.400800704956055 41 11 10 10 10 1.437568442723759 58.1070794788524 0.0 3 0.8512013255783368 3.158816468716192 29038.0 154.62501821755598 0.0 - - - - - - - 238.16666666666666 58 6 TRIM32 tripartite motif-containing 32 3483 438 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2294.[MT7]-FLLDTNK[MT7].2y4_1.heavy 569.839 / 621.332 28271.0 30.465599060058594 48 18 10 10 10 3.505115712630486 22.857265911714485 0.0 3 0.985947131759886 10.39848277918457 28271.0 65.4569048171531 0.0 - - - - - - - 333.0 56 6 MCM6 minichromosome maintenance complex component 6 3485 438 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2294.[MT7]-FLLDTNK[MT7].2b4_1.heavy 569.839 / 633.373 22617.0 30.465599060058594 48 18 10 10 10 3.505115712630486 22.857265911714485 0.0 3 0.985947131759886 10.39848277918457 22617.0 9.33874924834636 1.0 - - - - - - - 333.0 49 4 MCM6 minichromosome maintenance complex component 6 3487 438 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2294.[MT7]-FLLDTNK[MT7].2y3_1.heavy 569.839 / 506.306 27606.0 30.465599060058594 48 18 10 10 10 3.505115712630486 22.857265911714485 0.0 3 0.985947131759886 10.39848277918457 27606.0 11.420084185207457 1.0 - - - - - - - 333.0 55 2 MCM6 minichromosome maintenance complex component 6 3489 438 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2294.[MT7]-FLLDTNK[MT7].2y6_1.heavy 569.839 / 847.5 27606.0 30.465599060058594 48 18 10 10 10 3.505115712630486 22.857265911714485 0.0 3 0.985947131759886 10.39848277918457 27606.0 54.958130491592776 0.0 - - - - - - - 333.0 55 4 MCM6 minichromosome maintenance complex component 6 3491 439 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2022.[MT7]-QIFIPILQGLALAAK[MT7].3b6_1.heavy 628.736 / 856.541 14047.0 49.597599029541016 47 17 10 10 10 2.774698930682565 36.039946134047916 0.0 3 0.9709548495688087 7.223850224090699 14047.0 72.79432766367137 0.0 - - - - - - - 220.38888888888889 28 18 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 3493 439 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2022.[MT7]-QIFIPILQGLALAAK[MT7].3b4_1.heavy 628.736 / 646.404 33164.0 49.597599029541016 47 17 10 10 10 2.774698930682565 36.039946134047916 0.0 3 0.9709548495688087 7.223850224090699 33164.0 177.1522773434415 0.0 - - - - - - - 290.6666666666667 66 12 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 3495 439 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2022.[MT7]-QIFIPILQGLALAAK[MT7].3b3_1.heavy 628.736 / 533.32 15419.0 49.597599029541016 47 17 10 10 10 2.774698930682565 36.039946134047916 0.0 3 0.9709548495688087 7.223850224090699 15419.0 103.95946062353578 0.0 - - - - - - - 212.4375 30 16 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 3497 439 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2022.[MT7]-QIFIPILQGLALAAK[MT7].3y5_1.heavy 628.736 / 617.41 14554.0 49.597599029541016 47 17 10 10 10 2.774698930682565 36.039946134047916 0.0 3 0.9709548495688087 7.223850224090699 14554.0 121.5494925606335 0.0 - - - - - - - 230.73333333333332 29 15 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 3499 440 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2193.[MT7]-AEVQSNR.2y5_1.heavy 474.255 / 603.321 4629.0 13.534000396728516 42 20 2 10 10 5.297233399077009 18.877778732087585 0.0 3 0.9937043291032437 15.545806213150618 4629.0 70.85204081632654 0.0 - - - - - - - 190.5625 9 16 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 3501 440 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2193.[MT7]-AEVQSNR.2b4_1.heavy 474.255 / 572.316 2167.0 13.534000396728516 42 20 2 10 10 5.297233399077009 18.877778732087585 0.0 3 0.9937043291032437 15.545806213150618 2167.0 10.640849492151432 1.0 - - - - - - - 255.0 4 22 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 3503 440 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2193.[MT7]-AEVQSNR.2y6_1.heavy 474.255 / 732.364 7189.0 13.534000396728516 42 20 2 10 10 5.297233399077009 18.877778732087585 0.0 3 0.9937043291032437 15.545806213150618 7189.0 32.992095721537346 0.0 - - - - - - - 275.44 14 25 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 3505 440 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2193.[MT7]-AEVQSNR.2y1_1.heavy 474.255 / 175.119 N/A 13.534000396728516 42 20 2 10 10 5.297233399077009 18.877778732087585 0.0 3 0.9937043291032437 15.545806213150618 4038.0 -0.3726811259806183 18.0 - - - - - - - 1266.2857142857142 42 7 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 3507 441 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2021.[MT7]-SSDIISLLVSIYGSK[MT7].3b6_1.heavy 624.031 / 747.401 13041.0 48.515499114990234 41 11 10 10 10 1.1723666571680331 62.592502978595505 0.0 3 0.8704501582707517 3.3910941792717817 13041.0 109.27512605042017 0.0 - - - - - - - 151.35 26 20 ANAPC2;LOC650621 anaphase promoting complex subunit 2;anaphase-promoting complex subunit 2-like 3509 441 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2021.[MT7]-SSDIISLLVSIYGSK[MT7].3b4_1.heavy 624.031 / 547.284 11651.0 48.515499114990234 41 11 10 10 10 1.1723666571680331 62.592502978595505 0.0 3 0.8704501582707517 3.3910941792717817 11651.0 149.23304108091997 0.0 - - - - - - - 161.86363636363637 23 22 ANAPC2;LOC650621 anaphase promoting complex subunit 2;anaphase-promoting complex subunit 2-like 3511 441 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2021.[MT7]-SSDIISLLVSIYGSK[MT7].3b5_1.heavy 624.031 / 660.369 9117.0 48.515499114990234 41 11 10 10 10 1.1723666571680331 62.592502978595505 0.0 3 0.8704501582707517 3.3910941792717817 9117.0 207.9120731707317 0.0 - - - - - - - 118.22222222222223 18 18 ANAPC2;LOC650621 anaphase promoting complex subunit 2;anaphase-promoting complex subunit 2-like 3513 441 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2021.[MT7]-SSDIISLLVSIYGSK[MT7].3y4_1.heavy 624.031 / 598.332 47096.0 48.515499114990234 41 11 10 10 10 1.1723666571680331 62.592502978595505 0.0 3 0.8704501582707517 3.3910941792717817 47096.0 212.38135747808377 0.0 - - - - - - - 222.3125 94 16 ANAPC2;LOC650621 anaphase promoting complex subunit 2;anaphase-promoting complex subunit 2-like 3515 442 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A9860.[MT7]-K[MT7]PSATQQK[MT7].3y7_1.heavy 440.605 / 903.502 N/A 13.898099899291992 47 17 10 10 10 3.027814155284068 33.02712612842582 0.0 3 0.9759320012680793 7.939030322362926 219.0 2.0091743119266057 0.0 - - - - - - - 0.0 0 0 UBE2E3 ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) 3517 442 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A9860.[MT7]-K[MT7]PSATQQK[MT7].3y3_1.heavy 440.605 / 547.332 9288.0 13.898099899291992 47 17 10 10 10 3.027814155284068 33.02712612842582 0.0 3 0.9759320012680793 7.939030322362926 9288.0 42.47560975609756 0.0 - - - - - - - 213.42857142857142 18 21 UBE2E3 ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) 3519 442 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A9860.[MT7]-K[MT7]PSATQQK[MT7].3y6_1.heavy 440.605 / 806.449 4043.0 13.898099899291992 47 17 10 10 10 3.027814155284068 33.02712612842582 0.0 3 0.9759320012680793 7.939030322362926 4043.0 22.22117213355117 0.0 - - - - - - - 188.8181818181818 8 11 UBE2E3 ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) 3521 442 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A9860.[MT7]-K[MT7]PSATQQK[MT7].3y4_1.heavy 440.605 / 648.38 10162.0 13.898099899291992 47 17 10 10 10 3.027814155284068 33.02712612842582 0.0 3 0.9759320012680793 7.939030322362926 10162.0 93.20802384901224 0.0 - - - - - - - 211.4 20 15 UBE2E3 ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) 3523 443 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 ODP2_ECOLI.AEAPAAAPAAK.2y7.peptide 484.26 / 599.35 199014.0 15.237500190734863 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 199014.0 407.10352731013444 0.0 - - - - - - - 756.0 398 7 3525 443 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 ODP2_ECOLI.AEAPAAAPAAK.2y8.peptide 484.26 / 696.4 343435.0 15.237500190734863 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 343435.0 399.90701026182546 0.0 - - - - - - - 835.625 686 8 3527 443 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 ODP2_ECOLI.AEAPAAAPAAK.2y6.peptide 484.26 / 528.31 160019.0 15.237500190734863 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 160019.0 633.5960764013564 0.0 - - - - - - - 232.16666666666666 320 6 3529 444 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6800.[MT7]-GIDIPVLPR.2y5_1.heavy 562.351 / 581.377 27042.0 34.92219924926758 50 20 10 10 10 8.27456265336144 12.085230868289603 0.0 3 0.994117339877097 16.082825897322525 27042.0 33.132710398801635 0.0 - - - - - - - 682.5 54 8 PIK3CG phosphoinositide-3-kinase, catalytic, gamma polypeptide 3531 444 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6800.[MT7]-GIDIPVLPR.2b4_1.heavy 562.351 / 543.326 13931.0 34.92219924926758 50 20 10 10 10 8.27456265336144 12.085230868289603 0.0 3 0.994117339877097 16.082825897322525 13931.0 28.820585242753587 0.0 - - - - - - - 273.0 27 3 PIK3CG phosphoinositide-3-kinase, catalytic, gamma polypeptide 3533 444 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6800.[MT7]-GIDIPVLPR.2y6_1.heavy 562.351 / 694.461 21853.0 34.92219924926758 50 20 10 10 10 8.27456265336144 12.085230868289603 0.0 3 0.994117339877097 16.082825897322525 21853.0 50.43 0.0 - - - - - - - 697.6666666666666 43 9 PIK3CG phosphoinositide-3-kinase, catalytic, gamma polypeptide 3535 444 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6800.[MT7]-GIDIPVLPR.2y7_1.heavy 562.351 / 809.488 6283.0 34.92219924926758 50 20 10 10 10 8.27456265336144 12.085230868289603 0.0 3 0.994117339877097 16.082825897322525 6283.0 0.6254629626364117 1.0 - - - - - - - 273.0 12 6 PIK3CG phosphoinositide-3-kinase, catalytic, gamma polypeptide 3537 445 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6602.[MT7]-VIEVFIR.2y4_1.heavy 510.322 / 534.34 13424.0 36.30910110473633 45 20 10 5 10 14.043963582200236 7.120496960469419 0.0410003662109375 3 0.9974763408432864 24.56154284038351 13424.0 59.684384293205 0.0 - - - - - - - 348.2 26 5 RBL2 retinoblastoma-like 2 (p130) 3539 445 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6602.[MT7]-VIEVFIR.2y5_1.heavy 510.322 / 663.382 10441.0 36.30910110473633 45 20 10 5 10 14.043963582200236 7.120496960469419 0.0410003662109375 3 0.9974763408432864 24.56154284038351 10441.0 56.22226192496343 0.0 - - - - - - - 355.2857142857143 20 7 RBL2 retinoblastoma-like 2 (p130) 3541 445 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6602.[MT7]-VIEVFIR.2b4_1.heavy 510.322 / 585.373 10938.0 36.30910110473633 45 20 10 5 10 14.043963582200236 7.120496960469419 0.0410003662109375 3 0.9974763408432864 24.56154284038351 10938.0 40.49480885311871 0.0 - - - - - - - 447.4 21 5 RBL2 retinoblastoma-like 2 (p130) 3543 445 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6602.[MT7]-VIEVFIR.2y6_1.heavy 510.322 / 776.466 31074.0 36.30910110473633 45 20 10 5 10 14.043963582200236 7.120496960469419 0.0410003662109375 3 0.9974763408432864 24.56154284038351 31074.0 163.62019936044447 0.0 - - - - - - - 249.0 62 6 RBL2 retinoblastoma-like 2 (p130) 3545 446 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6812.[MT7]-YQVVQTLDC[CAM]LR.2b3_1.heavy 769.909 / 535.3 23268.0 33.83689880371094 44 14 10 10 10 1.6565850169975136 43.206932082391546 0.0 3 0.9474202032415441 5.3583537042608596 23268.0 86.26547096096884 0.0 - - - - - - - 298.0 46 5 PIK3CG phosphoinositide-3-kinase, catalytic, gamma polypeptide 3547 446 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6812.[MT7]-YQVVQTLDC[CAM]LR.2y8_1.heavy 769.909 / 1004.52 14319.0 33.83689880371094 44 14 10 10 10 1.6565850169975136 43.206932082391546 0.0 3 0.9474202032415441 5.3583537042608596 14319.0 69.97191278540353 0.0 - - - - - - - 298.0 28 2 PIK3CG phosphoinositide-3-kinase, catalytic, gamma polypeptide 3549 446 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6812.[MT7]-YQVVQTLDC[CAM]LR.2y9_1.heavy 769.909 / 1103.59 14915.0 33.83689880371094 44 14 10 10 10 1.6565850169975136 43.206932082391546 0.0 3 0.9474202032415441 5.3583537042608596 14915.0 62.537768540690024 0.0 - - - - - - - 298.0 29 2 PIK3CG phosphoinositide-3-kinase, catalytic, gamma polypeptide 3551 446 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6812.[MT7]-YQVVQTLDC[CAM]LR.2y10_1.heavy 769.909 / 1231.65 10142.0 33.83689880371094 44 14 10 10 10 1.6565850169975136 43.206932082391546 0.0 3 0.9474202032415441 5.3583537042608596 10142.0 47.62132643081178 0.0 - - - - - - - 298.0 20 3 PIK3CG phosphoinositide-3-kinase, catalytic, gamma polypeptide 3553 447 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 ODP2_ECOLI.EAAPAAAPAAAAAK.2y7.peptide 590.82 / 599.35 377187.0 17.554399490356445 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 377187.0 2139.2843178132925 0.0 - - - - - - - 520.0 754 1 3555 447 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 ODP2_ECOLI.EAAPAAAPAAAAAK.2y9.peptide 590.82 / 741.43 283540.0 17.554399490356445 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 283540.0 906.0147218111483 0.0 - - - - - - - 173.0 567 1 3557 447 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 ODP2_ECOLI.EAAPAAAPAAAAAK.2y11.peptide 590.82 / 909.52 293252.0 17.554399490356445 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 293252.0 1005.7694886803679 0.0 - - - - - - - 347.0 586 1 3559 448 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6613.[MT7]-AEAWDSYR.2y5_1.heavy 571.273 / 726.321 7844.0 26.089750289916992 43 18 10 5 10 3.0460948794114793 26.278950707628724 0.0457000732421875 3 0.9842253427660274 9.81318173796721 7844.0 16.776041462666786 0.0 - - - - - - - 302.0 15 1 RBL2 retinoblastoma-like 2 (p130) 3561 448 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6613.[MT7]-AEAWDSYR.2y6_1.heavy 571.273 / 797.358 10862.0 26.089750289916992 43 18 10 5 10 3.0460948794114793 26.278950707628724 0.0457000732421875 3 0.9842253427660274 9.81318173796721 10862.0 50.56180894643779 0.0 - - - - - - - 302.0 21 3 RBL2 retinoblastoma-like 2 (p130) 3563 448 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6613.[MT7]-AEAWDSYR.2b5_1.heavy 571.273 / 717.332 14180.0 26.089750289916992 43 18 10 5 10 3.0460948794114793 26.278950707628724 0.0457000732421875 3 0.9842253427660274 9.81318173796721 14180.0 30.541120330410912 0.0 - - - - - - - 302.0 28 4 RBL2 retinoblastoma-like 2 (p130) 3565 448 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6613.[MT7]-AEAWDSYR.2y7_1.heavy 571.273 / 926.4 12370.0 26.089750289916992 43 18 10 5 10 3.0460948794114793 26.278950707628724 0.0457000732421875 3 0.9842253427660274 9.81318173796721 12370.0 77.78354304635762 0.0 - - - - - - - 302.0 24 6 RBL2 retinoblastoma-like 2 (p130) 3567 449 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6610.[MT7]-ISTPLTGVR.2y8_1.heavy 544.333 / 830.473 22216.0 28.062949657440186 39 20 8 5 6 7.639230643100903 13.090323446420802 0.04780006408691406 6 0.9911842800801098 13.13451102283453 22216.0 34.11927061119833 1.0 - - - - - - - 787.5 57 8 RBL2 retinoblastoma-like 2 (p130) 3569 449 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6610.[MT7]-ISTPLTGVR.2y6_1.heavy 544.333 / 642.393 8621.0 28.062949657440186 39 20 8 5 6 7.639230643100903 13.090323446420802 0.04780006408691406 6 0.9911842800801098 13.13451102283453 8621.0 16.251745143515464 0.0 - - - - - - - 332.0 17 6 RBL2 retinoblastoma-like 2 (p130) 3571 449 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6610.[MT7]-ISTPLTGVR.2b5_1.heavy 544.333 / 656.41 1326.0 28.062949657440186 39 20 8 5 6 7.639230643100903 13.090323446420802 0.04780006408691406 6 0.9911842800801098 13.13451102283453 1326.0 2.5999999999999996 20.0 - - - - - - - 773.6666666666666 6 9 RBL2 retinoblastoma-like 2 (p130) 3573 449 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6610.[MT7]-ISTPLTGVR.2y7_1.heavy 544.333 / 743.441 2984.0 28.062949657440186 39 20 8 5 6 7.639230643100903 13.090323446420802 0.04780006408691406 6 0.9911842800801098 13.13451102283453 2984.0 0.0 4.0 - - - - - - - 332.0 11 6 RBL2 retinoblastoma-like 2 (p130) 3575 450 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6724.[MT7]-IINDLLAR.2b4_1.heavy 536.336 / 600.347 5737.0 36.12350082397461 48 18 10 10 10 5.313287833059121 18.82073833414462 0.0 3 0.9836480137430358 9.637924785702134 5737.0 14.952594879031073 0.0 - - - - - - - 261.0 11 3 DNA2 DNA replication helicase 2 homolog (yeast) 3577 450 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6724.[MT7]-IINDLLAR.2y6_1.heavy 536.336 / 701.394 3651.0 36.12350082397461 48 18 10 10 10 5.313287833059121 18.82073833414462 0.0 3 0.9836480137430358 9.637924785702134 3651.0 2.5668691014798184 0.0 - - - - - - - 261.0 7 4 DNA2 DNA replication helicase 2 homolog (yeast) 3579 450 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6724.[MT7]-IINDLLAR.2b5_1.heavy 536.336 / 713.431 1565.0 36.12350082397461 48 18 10 10 10 5.313287833059121 18.82073833414462 0.0 3 0.9836480137430358 9.637924785702134 1565.0 3.837731824271913 3.0 - - - - - - - 261.0 3 5 DNA2 DNA replication helicase 2 homolog (yeast) 3581 450 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6724.[MT7]-IINDLLAR.2y7_1.heavy 536.336 / 814.478 6258.0 36.12350082397461 48 18 10 10 10 5.313287833059121 18.82073833414462 0.0 3 0.9836480137430358 9.637924785702134 6258.0 0.40800736309249874 1.0 - - - - - - - 261.0 13 1 DNA2 DNA replication helicase 2 homolog (yeast) 3583 451 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A9823.[MT7]-LDTQLK[MT7].2y4_1.heavy 503.313 / 633.405 34873.0 23.89389991760254 38 20 0 10 8 10.43307737153862 9.584899683845869 0.0 4 0.9970489133897885 22.712478579926678 34873.0 36.68596941896025 0.0 - - - - - - - 739.2857142857143 69 7 TRIM37 tripartite motif-containing 37 3585 451 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A9823.[MT7]-LDTQLK[MT7].2y5_1.heavy 503.313 / 748.432 37869.0 23.89389991760254 38 20 0 10 8 10.43307737153862 9.584899683845869 0.0 4 0.9970489133897885 22.712478579926678 37869.0 23.673874972948905 1.0 - - - - - - - 272.0 266 3 TRIM37 tripartite motif-containing 37 3587 451 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A9823.[MT7]-LDTQLK[MT7].2b4_1.heavy 503.313 / 602.327 14712.0 23.89389991760254 38 20 0 10 8 10.43307737153862 9.584899683845869 0.0 4 0.9970489133897885 22.712478579926678 14712.0 20.577663301923792 1.0 - - - - - - - 272.0 29 8 TRIM37 tripartite motif-containing 37 3589 451 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A9823.[MT7]-LDTQLK[MT7].2y3_1.heavy 503.313 / 532.357 6539.0 23.89389991760254 38 20 0 10 8 10.43307737153862 9.584899683845869 0.0 4 0.9970489133897885 22.712478579926678 6539.0 8.481640491243043 0.0 - - - - - - - 622.7142857142857 13 7 TRIM37 tripartite motif-containing 37 3591 452 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A9723.[MT7]-ILTDVNVVAVELVK[MT7].3b6_1.heavy 600.708 / 800.463 21586.0 42.19060134887695 43 18 10 5 10 4.947227742570524 20.213340724039746 0.04019927978515625 3 0.9877595138213155 11.143433876475404 21586.0 77.89034972205982 0.0 - - - - - - - 245.4 43 10 ATR ataxia telangiectasia and Rad3 related 3593 452 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A9723.[MT7]-ILTDVNVVAVELVK[MT7].3b4_1.heavy 600.708 / 587.352 11232.0 42.19060134887695 43 18 10 5 10 4.947227742570524 20.213340724039746 0.04019927978515625 3 0.9877595138213155 11.143433876475404 11232.0 33.93825095057034 0.0 - - - - - - - 275.57142857142856 22 7 ATR ataxia telangiectasia and Rad3 related 3595 452 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A9723.[MT7]-ILTDVNVVAVELVK[MT7].3b5_1.heavy 600.708 / 686.42 7897.0 42.19060134887695 43 18 10 5 10 4.947227742570524 20.213340724039746 0.04019927978515625 3 0.9877595138213155 11.143433876475404 7897.0 22.137144010052754 0.0 - - - - - - - 292.3333333333333 15 6 ATR ataxia telangiectasia and Rad3 related 3597 452 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A9723.[MT7]-ILTDVNVVAVELVK[MT7].3b7_1.heavy 600.708 / 899.532 8599.0 42.19060134887695 43 18 10 5 10 4.947227742570524 20.213340724039746 0.04019927978515625 3 0.9877595138213155 11.143433876475404 8599.0 37.98723034675506 0.0 - - - - - - - 225.28571428571428 17 7 ATR ataxia telangiectasia and Rad3 related 3599 453 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6739.[MT7]-TVLSTGMDNR.2y8_1.heavy 619.32 / 893.414 6628.0 24.339399337768555 47 17 10 10 10 3.0071129791590745 28.27871386833087 0.0 3 0.977880783807776 8.282734028729799 6628.0 14.728888888888887 0.0 - - - - - - - 670.2857142857143 13 7 DNA2 DNA replication helicase 2 homolog (yeast) 3601 453 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6739.[MT7]-TVLSTGMDNR.2y9_1.heavy 619.32 / 992.483 4971.0 24.339399337768555 47 17 10 10 10 3.0071129791590745 28.27871386833087 0.0 3 0.977880783807776 8.282734028729799 4971.0 18.547446783395632 0.0 - - - - - - - 276.0 9 3 DNA2 DNA replication helicase 2 homolog (yeast) 3603 453 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6739.[MT7]-TVLSTGMDNR.2y6_1.heavy 619.32 / 693.299 4971.0 24.339399337768555 47 17 10 10 10 3.0071129791590745 28.27871386833087 0.0 3 0.977880783807776 8.282734028729799 4971.0 7.9232175802033815 0.0 - - - - - - - 276.0 9 5 DNA2 DNA replication helicase 2 homolog (yeast) 3605 453 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6739.[MT7]-TVLSTGMDNR.2y7_1.heavy 619.32 / 780.331 10218.0 24.339399337768555 47 17 10 10 10 3.0071129791590745 28.27871386833087 0.0 3 0.977880783807776 8.282734028729799 10218.0 17.519333921019214 0.0 - - - - - - - 276.0 20 4 DNA2 DNA replication helicase 2 homolog (yeast) 3607 454 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6844.[MT7]-SASDVEER.2y4_1.heavy 518.755 / 532.273 8467.0 15.256450176239014 46 20 10 6 10 8.463066183237132 11.816048443301893 0.03789997100830078 3 0.9938719731532768 15.75723492083055 8467.0 69.85775413711583 0.0 - - - - - - - 256.3636363636364 16 11 SOS1 son of sevenless homolog 1 (Drosophila) 3609 454 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6844.[MT7]-SASDVEER.2b4_1.heavy 518.755 / 505.237 15241.0 15.256450176239014 46 20 10 6 10 8.463066183237132 11.816048443301893 0.03789997100830078 3 0.9938719731532768 15.75723492083055 15241.0 64.04462765957446 0.0 - - - - - - - 206.8 30 15 SOS1 son of sevenless homolog 1 (Drosophila) 3611 454 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6844.[MT7]-SASDVEER.2y6_1.heavy 518.755 / 734.331 2822.0 15.256450176239014 46 20 10 6 10 8.463066183237132 11.816048443301893 0.03789997100830078 3 0.9938719731532768 15.75723492083055 2822.0 11.007801418439715 2.0 - - - - - - - 197.4 8 10 SOS1 son of sevenless homolog 1 (Drosophila) 3613 454 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6844.[MT7]-SASDVEER.2y7_1.heavy 518.755 / 805.369 5927.0 15.256450176239014 46 20 10 6 10 8.463066183237132 11.816048443301893 0.03789997100830078 3 0.9938719731532768 15.75723492083055 5927.0 21.715012936773093 0.0 - - - - - - - 229.125 11 16 SOS1 son of sevenless homolog 1 (Drosophila) 3615 455 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6744.[MT7]-LNLSQDEIK[MT7].2y8_1.heavy 674.39 / 1090.59 7143.0 28.027099609375 40 12 10 10 8 1.6209502081238247 42.97995854683245 0.0 4 0.882624910370841 3.566415749474168 7143.0 20.141278890600923 1.0 - - - - - - - 325.0 16 5 DNA2 DNA replication helicase 2 homolog (yeast) 3617 455 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6744.[MT7]-LNLSQDEIK[MT7].2b6_1.heavy 674.39 / 815.438 10065.0 28.027099609375 40 12 10 10 8 1.6209502081238247 42.97995854683245 0.0 4 0.882624910370841 3.566415749474168 10065.0 21.088340932029375 0.0 - - - - - - - 325.0 20 1 DNA2 DNA replication helicase 2 homolog (yeast) 3619 455 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6744.[MT7]-LNLSQDEIK[MT7].2y3_1.heavy 674.39 / 533.341 7792.0 28.027099609375 40 12 10 10 8 1.6209502081238247 42.97995854683245 0.0 4 0.882624910370841 3.566415749474168 7792.0 16.864269231636044 0.0 - - - - - - - 741.8571428571429 15 7 DNA2 DNA replication helicase 2 homolog (yeast) 3621 455 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6744.[MT7]-LNLSQDEIK[MT7].2y6_1.heavy 674.39 / 863.459 5195.0 28.027099609375 40 12 10 10 8 1.6209502081238247 42.97995854683245 0.0 4 0.882624910370841 3.566415749474168 5195.0 22.389544861917745 0.0 - - - - - - - 325.0 10 2 DNA2 DNA replication helicase 2 homolog (yeast) 3623 456 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6749.[MT7]-IEEETQHLK[MT7].3y3_1.heavy 472.264 / 541.358 17664.0 22.01650047302246 48 18 10 10 10 2.5384863124041708 27.357252543911883 0.0 3 0.9818039849918154 9.13510372460405 17664.0 60.06702962088775 0.0 - - - - - - - 301.6666666666667 35 12 DNA2 DNA replication helicase 2 homolog (yeast) 3625 456 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6749.[MT7]-IEEETQHLK[MT7].3b4_1.heavy 472.264 / 645.321 17438.0 22.01650047302246 48 18 10 10 10 2.5384863124041708 27.357252543911883 0.0 3 0.9818039849918154 9.13510372460405 17438.0 141.97309734513271 0.0 - - - - - - - 294.1 34 10 DNA2 DNA replication helicase 2 homolog (yeast) 3627 456 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6749.[MT7]-IEEETQHLK[MT7].3b5_1.heavy 472.264 / 746.369 6567.0 22.01650047302246 48 18 10 10 10 2.5384863124041708 27.357252543911883 0.0 3 0.9818039849918154 9.13510372460405 6567.0 36.308636334015404 0.0 - - - - - - - 282.75 13 8 DNA2 DNA replication helicase 2 homolog (yeast) 3629 456 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6749.[MT7]-IEEETQHLK[MT7].3b3_1.heavy 472.264 / 516.279 14720.0 22.01650047302246 48 18 10 10 10 2.5384863124041708 27.357252543911883 0.0 3 0.9818039849918154 9.13510372460405 14720.0 28.17305022644 0.0 - - - - - - - 301.6666666666667 29 9 DNA2 DNA replication helicase 2 homolog (yeast) 3631 457 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6751.[MT7]-NLSVLPESTLFR.2y8_1.heavy 760.434 / 962.531 5857.0 38.00575065612793 39 14 10 5 10 1.6144449188619743 48.56497543440864 0.042499542236328125 3 0.934557621115695 4.797726119084646 5857.0 21.792953291692626 0.0 - - - - - - - 322.125 11 8 DNA2 DNA replication helicase 2 homolog (yeast) 3633 457 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6751.[MT7]-NLSVLPESTLFR.2b4_1.heavy 760.434 / 558.337 8200.0 38.00575065612793 39 14 10 5 10 1.6144449188619743 48.56497543440864 0.042499542236328125 3 0.934557621115695 4.797726119084646 8200.0 35.55022238142145 0.0 - - - - - - - 380.875 16 8 DNA2 DNA replication helicase 2 homolog (yeast) 3635 457 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6751.[MT7]-NLSVLPESTLFR.2y10_1.heavy 760.434 / 1148.63 4217.0 38.00575065612793 39 14 10 5 10 1.6144449188619743 48.56497543440864 0.042499542236328125 3 0.934557621115695 4.797726119084646 4217.0 23.05582290015126 0.0 - - - - - - - 281.0 8 10 DNA2 DNA replication helicase 2 homolog (yeast) 3637 457 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6751.[MT7]-NLSVLPESTLFR.2y7_1.heavy 760.434 / 849.446 11011.0 38.00575065612793 39 14 10 5 10 1.6144449188619743 48.56497543440864 0.042499542236328125 3 0.934557621115695 4.797726119084646 11011.0 43.19880597014926 0.0 - - - - - - - 338.44444444444446 22 9 DNA2 DNA replication helicase 2 homolog (yeast) 3639 458 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6756.[MT7]-YLVLAVNTVQNK[MT7].3y3_1.heavy 550.666 / 533.316 77557.0 34.92219924926758 41 11 10 10 10 1.069023846931211 62.11414866703095 0.0 3 0.8789786588964295 3.5111624813603197 77557.0 101.13098021582735 0.0 - - - - - - - 278.0 155 2 DNA2 DNA replication helicase 2 homolog (yeast) 3641 458 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6756.[MT7]-YLVLAVNTVQNK[MT7].3b4_1.heavy 550.666 / 633.409 53372.0 34.92219924926758 41 11 10 10 10 1.069023846931211 62.11414866703095 0.0 3 0.8789786588964295 3.5111624813603197 53372.0 133.43 0.0 - - - - - - - 278.0 106 5 DNA2 DNA replication helicase 2 homolog (yeast) 3643 458 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6756.[MT7]-YLVLAVNTVQNK[MT7].3b5_1.heavy 550.666 / 704.446 80337.0 34.92219924926758 41 11 10 10 10 1.069023846931211 62.11414866703095 0.0 3 0.8789786588964295 3.5111624813603197 80337.0 162.9537470023981 0.0 - - - - - - - 278.0 160 2 DNA2 DNA replication helicase 2 homolog (yeast) 3645 458 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6756.[MT7]-YLVLAVNTVQNK[MT7].3b3_1.heavy 550.666 / 520.325 44199.0 34.92219924926758 41 11 10 10 10 1.069023846931211 62.11414866703095 0.0 3 0.8789786588964295 3.5111624813603197 44199.0 113.67728417266187 0.0 - - - - - - - 754.5714285714286 88 7 DNA2 DNA replication helicase 2 homolog (yeast) 3647 459 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6754.[MT7]-YLVLAVNTVQNK[MT7].2b3_1.heavy 825.495 / 520.325 10874.0 34.92219924926758 44 14 10 10 10 1.5707147606394833 50.481719140690004 0.0 3 0.9379929618830721 4.93028257013431 10874.0 15.606279314266096 0.0 - - - - - - - 637.4285714285714 21 7 DNA2 DNA replication helicase 2 homolog (yeast) 3649 459 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6754.[MT7]-YLVLAVNTVQNK[MT7].2y8_1.heavy 825.495 / 1017.58 4740.0 34.92219924926758 44 14 10 10 10 1.5707147606394833 50.481719140690004 0.0 3 0.9379929618830721 4.93028257013431 4740.0 7.823033341597568 1.0 - - - - - - - 279.0 11 5 DNA2 DNA replication helicase 2 homolog (yeast) 3651 459 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6754.[MT7]-YLVLAVNTVQNK[MT7].2b4_1.heavy 825.495 / 633.409 10038.0 34.92219924926758 44 14 10 10 10 1.5707147606394833 50.481719140690004 0.0 3 0.9379929618830721 4.93028257013431 10038.0 22.673873185785233 0.0 - - - - - - - 279.0 20 7 DNA2 DNA replication helicase 2 homolog (yeast) 3653 459 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6754.[MT7]-YLVLAVNTVQNK[MT7].2y6_1.heavy 825.495 / 847.475 4182.0 34.92219924926758 44 14 10 10 10 1.5707147606394833 50.481719140690004 0.0 3 0.9379929618830721 4.93028257013431 4182.0 18.49235633070947 0.0 - - - - - - - 279.0 8 3 DNA2 DNA replication helicase 2 homolog (yeast) 3655 460 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6758.[MT7]-LQELAFQTIQEIR.2b3_1.heavy 866.989 / 515.295 48990.0 41.97169876098633 48 18 10 10 10 4.354849883058276 22.96290404613743 0.0 3 0.9822086512738064 9.238722714534147 48990.0 156.86300323206206 0.0 - - - - - - - 303.3333333333333 97 12 DNA2 DNA replication helicase 2 homolog (yeast) 3657 460 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6758.[MT7]-LQELAFQTIQEIR.2y8_1.heavy 866.989 / 1034.56 36424.0 41.97169876098633 48 18 10 10 10 4.354849883058276 22.96290404613743 0.0 3 0.9822086512738064 9.238722714534147 36424.0 161.43970695970697 0.0 - - - - - - - 273.0 72 8 DNA2 DNA replication helicase 2 homolog (yeast) 3659 460 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6758.[MT7]-LQELAFQTIQEIR.2y9_1.heavy 866.989 / 1105.6 38974.0 41.97169876098633 48 18 10 10 10 4.354849883058276 22.96290404613743 0.0 3 0.9822086512738064 9.238722714534147 38974.0 89.93176825919824 0.0 - - - - - - - 291.2 77 10 DNA2 DNA replication helicase 2 homolog (yeast) 3661 460 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6758.[MT7]-LQELAFQTIQEIR.2y10_1.heavy 866.989 / 1218.68 17666.0 41.97169876098633 48 18 10 10 10 4.354849883058276 22.96290404613743 0.0 3 0.9822086512738064 9.238722714534147 17666.0 186.3665934065934 0.0 - - - - - - - 182.0 35 5 DNA2 DNA replication helicase 2 homolog (yeast) 3663 461 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 TNAA_ECO24.GLTFTYEPK.2y7.peptide 528.27 / 885.44 334667.0 29.48270034790039 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 334667.0 975.1505290289806 0.0 - - - - - - - 333.0 669 3 3665 461 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 TNAA_ECO24.GLTFTYEPK.2y6.peptide 528.27 / 784.39 409333.0 29.48270034790039 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 409333.0 426.8492423930789 0.0 - - - - - - - 667.0 818 1 3667 461 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 TNAA_ECO24.GLTFTYEPK.2y5.peptide 528.27 / 637.32 759082.0 29.48270034790039 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 759082.0 587.3886295368688 0.0 - - - - - - - 1333.0 1518 1 3669 462 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2301.[MT7]-GIQNQAEPR.3y3_1.heavy 386.211 / 401.214 N/A N/A - - - - - - - - - 0.0 - - - - - - - BUB1 budding uninhibited by benzimidazoles 1 homolog (yeast) 3671 462 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2301.[MT7]-GIQNQAEPR.3b4_1.heavy 386.211 / 557.316 N/A N/A - - - - - - - - - 0.0 - - - - - - - BUB1 budding uninhibited by benzimidazoles 1 homolog (yeast) 3673 462 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2301.[MT7]-GIQNQAEPR.3y4_1.heavy 386.211 / 472.251 N/A N/A - - - - - - - - - 0.0 - - - - - - - BUB1 budding uninhibited by benzimidazoles 1 homolog (yeast) 3675 462 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2301.[MT7]-GIQNQAEPR.3y1_1.heavy 386.211 / 175.119 N/A N/A - - - - - - - - - 0.0 - - - - - - - BUB1 budding uninhibited by benzimidazoles 1 homolog (yeast) 3677 463 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2303.[MT7]-WNPTQNVR.2y4_1.heavy 579.81 / 516.289 1701.0 24.410449981689453 45 20 10 5 10 17.411054206788734 5.7434776098169324 0.0410003662109375 3 0.9917662463193708 13.591425037186312 1701.0 0.4399153737658673 22.0 - - - - - - - 747.7272727272727 10 11 UBE2R2;CDC34 ubiquitin-conjugating enzyme E2R 2;cell division cycle 34 homolog (S. cerevisiae) 3679 463 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2303.[MT7]-WNPTQNVR.2y5_1.heavy 579.81 / 617.337 5954.0 24.410449981689453 45 20 10 5 10 17.411054206788734 5.7434776098169324 0.0410003662109375 3 0.9917662463193708 13.591425037186312 5954.0 10.185855379188713 1.0 - - - - - - - 284.0 11 3 UBE2R2;CDC34 ubiquitin-conjugating enzyme E2R 2;cell division cycle 34 homolog (S. cerevisiae) 3681 463 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2303.[MT7]-WNPTQNVR.2y6_1.heavy 579.81 / 714.389 41109.0 24.410449981689453 45 20 10 5 10 17.411054206788734 5.7434776098169324 0.0410003662109375 3 0.9917662463193708 13.591425037186312 41109.0 140.65513227513227 0.0 - - - - - - - 1255.7142857142858 82 7 UBE2R2;CDC34 ubiquitin-conjugating enzyme E2R 2;cell division cycle 34 homolog (S. cerevisiae) 3683 463 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2303.[MT7]-WNPTQNVR.2y7_1.heavy 579.81 / 828.432 37991.0 24.410449981689453 45 20 10 5 10 17.411054206788734 5.7434776098169324 0.0410003662109375 3 0.9917662463193708 13.591425037186312 37991.0 41.16664519987089 0.0 - - - - - - - 284.0 75 4 UBE2R2;CDC34 ubiquitin-conjugating enzyme E2R 2;cell division cycle 34 homolog (S. cerevisiae) 3685 464 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A7015.[MT7]-STLVESR.2y6_1.heavy 468.268 / 704.394 7293.0 18.930299758911133 44 16 10 10 8 3.298138647706911 30.32013225687973 0.0 4 0.9604767477728057 6.187214317138211 7293.0 14.34536802030457 1.0 - - - - - - - 275.8 14 5 MTOR mechanistic target of rapamycin (serine/threonine kinase) 3687 464 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A7015.[MT7]-STLVESR.2b5_1.heavy 468.268 / 674.384 6899.0 18.930299758911133 44 16 10 10 8 3.298138647706911 30.32013225687973 0.0 4 0.9604767477728057 6.187214317138211 6899.0 27.724407783417938 0.0 - - - - - - - 306.44444444444446 13 9 MTOR mechanistic target of rapamycin (serine/threonine kinase) 3689 464 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A7015.[MT7]-STLVESR.2y5_1.heavy 468.268 / 603.346 1971.0 18.930299758911133 44 16 10 10 8 3.298138647706911 30.32013225687973 0.0 4 0.9604767477728057 6.187214317138211 1971.0 4.489342915471198 5.0 - - - - - - - 197.0 6 5 MTOR mechanistic target of rapamycin (serine/threonine kinase) 3691 464 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A7015.[MT7]-STLVESR.2b4_1.heavy 468.268 / 545.341 3942.0 18.930299758911133 44 16 10 10 8 3.298138647706911 30.32013225687973 0.0 4 0.9604767477728057 6.187214317138211 3942.0 7.051143367551816 1.0 - - - - - - - 788.4285714285714 9 7 MTOR mechanistic target of rapamycin (serine/threonine kinase) 3693 465 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1907.[MT7]-GLQPEC[CAM]C[CAM]AVFR.2y8_1.heavy 740.862 / 1038.45 41333.0 28.734899520874023 45 20 10 5 10 5.817722921673977 17.188855733821413 0.04840087890625 3 0.9925904299785285 14.328388227030624 41333.0 129.07740740311678 0.0 - - - - - - - 333.0 82 5 RAF1 v-raf-1 murine leukemia viral oncogene homolog 1 3695 465 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1907.[MT7]-GLQPEC[CAM]C[CAM]AVFR.2y5_1.heavy 740.862 / 652.323 1333.0 28.734899520874023 45 20 10 5 10 5.817722921673977 17.188855733821413 0.04840087890625 3 0.9925904299785285 14.328388227030624 1333.0 2.345140704647676 15.0 - - - - - - - 333.0 4 3 RAF1 v-raf-1 murine leukemia viral oncogene homolog 1 3697 465 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1907.[MT7]-GLQPEC[CAM]C[CAM]AVFR.2y6_1.heavy 740.862 / 812.354 4333.0 28.734899520874023 45 20 10 5 10 5.817722921673977 17.188855733821413 0.04840087890625 3 0.9925904299785285 14.328388227030624 4333.0 11.707688552379611 0.0 - - - - - - - 333.0 8 4 RAF1 v-raf-1 murine leukemia viral oncogene homolog 1 3699 465 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1907.[MT7]-GLQPEC[CAM]C[CAM]AVFR.2y7_1.heavy 740.862 / 941.397 3667.0 28.734899520874023 45 20 10 5 10 5.817722921673977 17.188855733821413 0.04840087890625 3 0.9925904299785285 14.328388227030624 3667.0 4.10695200959808 0.0 - - - - - - - 667.0 7 1 RAF1 v-raf-1 murine leukemia viral oncogene homolog 1 3701 466 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1908.[MT7]-GVC[CAM]LIDEFDK[MT7].2y4_1.heavy 742.389 / 682.353 13283.0 34.61709976196289 50 20 10 10 10 8.136139825571055 12.290840883254026 0.0 3 0.9962144651075814 20.052182321628468 13283.0 55.63214271926713 0.0 - - - - - - - 277.0 26 6 MCM2 minichromosome maintenance complex component 2 3703 466 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1908.[MT7]-GVC[CAM]LIDEFDK[MT7].2y5_1.heavy 742.389 / 797.38 11623.0 34.61709976196289 50 20 10 10 10 8.136139825571055 12.290840883254026 0.0 3 0.9962144651075814 20.052182321628468 11623.0 30.119166430641194 0.0 - - - - - - - 277.0 23 2 MCM2 minichromosome maintenance complex component 2 3705 466 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1908.[MT7]-GVC[CAM]LIDEFDK[MT7].2b4_1.heavy 742.389 / 574.314 12176.0 34.61709976196289 50 20 10 10 10 8.136139825571055 12.290840883254026 0.0 3 0.9962144651075814 20.052182321628468 12176.0 32.653082637965966 0.0 - - - - - - - 691.5 24 8 MCM2 minichromosome maintenance complex component 2 3707 466 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1908.[MT7]-GVC[CAM]LIDEFDK[MT7].2b6_1.heavy 742.389 / 802.425 10793.0 34.61709976196289 50 20 10 10 10 8.136139825571055 12.290840883254026 0.0 3 0.9962144651075814 20.052182321628468 10793.0 25.171871731918042 0.0 - - - - - - - 277.0 21 7 MCM2 minichromosome maintenance complex component 2 3709 467 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1901.[MT7]-LLDVIHTENK[MT7].2y4_1.heavy 735.432 / 635.348 10667.0 29.938250064849854 43 18 10 5 10 3.351553086320282 20.238985846276492 0.04979896545410156 3 0.9816250905584182 9.09038975589964 10667.0 35.22941858475152 0.0 - - - - - - - 333.0 21 3 CDK2 cyclin-dependent kinase 2 3711 467 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1901.[MT7]-LLDVIHTENK[MT7].2y5_1.heavy 735.432 / 772.407 8333.0 29.938250064849854 43 18 10 5 10 3.351553086320282 20.238985846276492 0.04979896545410156 3 0.9816250905584182 9.09038975589964 8333.0 36.01771181976579 0.0 - - - - - - - 333.0 16 2 CDK2 cyclin-dependent kinase 2 3713 467 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1901.[MT7]-LLDVIHTENK[MT7].2b4_1.heavy 735.432 / 585.373 8333.0 29.938250064849854 43 18 10 5 10 3.351553086320282 20.238985846276492 0.04979896545410156 3 0.9816250905584182 9.09038975589964 8333.0 16.856679099684968 0.0 - - - - - - - 333.0 16 3 CDK2 cyclin-dependent kinase 2 3715 467 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1901.[MT7]-LLDVIHTENK[MT7].2y6_1.heavy 735.432 / 885.491 4000.0 29.938250064849854 43 18 10 5 10 3.351553086320282 20.238985846276492 0.04979896545410156 3 0.9816250905584182 9.09038975589964 4000.0 11.604197901049474 0.0 - - - - - - - 333.0 8 2 CDK2 cyclin-dependent kinase 2 3717 468 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1900.[MT7]-GVVC[CAM]IDEFDK[MT7].2y4_1.heavy 735.381 / 682.353 10270.0 31.100200653076172 50 20 10 10 10 7.84002589416899 12.755059913051419 0.0 3 0.9957619519848714 18.950729560839257 10270.0 28.34705882352941 0.0 - - - - - - - 331.0 20 4 MCM3 minichromosome maintenance complex component 3 3719 468 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1900.[MT7]-GVVC[CAM]IDEFDK[MT7].2y5_1.heavy 735.381 / 797.38 8945.0 31.100200653076172 50 20 10 10 10 7.84002589416899 12.755059913051419 0.0 3 0.9957619519848714 18.950729560839257 8945.0 37.81345663991834 0.0 - - - - - - - 331.0 17 4 MCM3 minichromosome maintenance complex component 3 3721 468 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1900.[MT7]-GVVC[CAM]IDEFDK[MT7].2b4_1.heavy 735.381 / 560.298 10270.0 31.100200653076172 50 20 10 10 10 7.84002589416899 12.755059913051419 0.0 3 0.9957619519848714 18.950729560839257 10270.0 9.098792756539236 1.0 - - - - - - - 331.0 20 5 MCM3 minichromosome maintenance complex component 3 3723 468 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1900.[MT7]-GVVC[CAM]IDEFDK[MT7].2y7_1.heavy 735.381 / 1070.49 10602.0 31.100200653076172 50 20 10 10 10 7.84002589416899 12.755059913051419 0.0 3 0.9957619519848714 18.950729560839257 10602.0 17.705553319919517 0.0 - - - - - - - 331.0 21 3 MCM3 minichromosome maintenance complex component 3 3725 469 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2504.[MT7]-IIQDIETIESNWR.3y7_1.heavy 587.648 / 905.448 23711.0 45.134300231933594 46 16 10 10 10 3.4206730690325857 29.234012716766706 0.0 3 0.9604434027386718 6.1845885098052555 23711.0 279.28013638843424 0.0 - - - - - - - 254.33333333333334 47 6 FBXW11;BTRC F-box and WD repeat domain containing 11;beta-transducin repeat containing 3727 469 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2504.[MT7]-IIQDIETIESNWR.3b4_1.heavy 587.648 / 614.363 76417.0 45.134300231933594 46 16 10 10 10 3.4206730690325857 29.234012716766706 0.0 3 0.9604434027386718 6.1845885098052555 76417.0 239.86163036728175 0.0 - - - - - - - 305.3 152 10 FBXW11;BTRC F-box and WD repeat domain containing 11;beta-transducin repeat containing 3729 469 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2504.[MT7]-IIQDIETIESNWR.3y4_1.heavy 587.648 / 562.273 43549.0 45.134300231933594 46 16 10 10 10 3.4206730690325857 29.234012716766706 0.0 3 0.9604434027386718 6.1845885098052555 43549.0 384.26307411566535 0.0 - - - - - - - 208.44444444444446 87 9 FBXW11;BTRC F-box and WD repeat domain containing 11;beta-transducin repeat containing 3731 469 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2504.[MT7]-IIQDIETIESNWR.3y5_1.heavy 587.648 / 691.316 73013.0 45.134300231933594 46 16 10 10 10 3.4206730690325857 29.234012716766706 0.0 3 0.9604434027386718 6.1845885098052555 73013.0 657.3910760888995 0.0 - - - - - - - 281.8 146 5 FBXW11;BTRC F-box and WD repeat domain containing 11;beta-transducin repeat containing 3733 470 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1906.[MT7]-TVILEILMEK[MT7].2y4_1.heavy 738.951 / 664.382 5944.0 45.721449851989746 40 20 6 6 8 8.077722982798576 12.379726342800925 0.039402008056640625 4 0.9960480884669998 19.625269738372523 5944.0 26.73227513227513 1.0 - - - - - - - 229.5 19 16 ATM;LOC651610 ataxia telangiectasia mutated;serine-protein kinase ATM-like 3735 470 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1906.[MT7]-TVILEILMEK[MT7].2y5_1.heavy 738.951 / 777.466 4215.0 45.721449851989746 40 20 6 6 8 8.077722982798576 12.379726342800925 0.039402008056640625 4 0.9960480884669998 19.625269738372523 4215.0 15.903819444444444 0.0 - - - - - - - 266.4 8 15 ATM;LOC651610 ataxia telangiectasia mutated;serine-protein kinase ATM-like 3737 470 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1906.[MT7]-TVILEILMEK[MT7].2y3_1.heavy 738.951 / 551.298 4755.0 45.721449851989746 40 20 6 6 8 8.077722982798576 12.379726342800925 0.039402008056640625 4 0.9960480884669998 19.625269738372523 4755.0 22.454166666666666 0.0 - - - - - - - 264.0 9 9 ATM;LOC651610 ataxia telangiectasia mutated;serine-protein kinase ATM-like 3739 470 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1906.[MT7]-TVILEILMEK[MT7].2y6_1.heavy 738.951 / 906.509 5403.0 45.721449851989746 40 20 6 6 8 8.077722982798576 12.379726342800925 0.039402008056640625 4 0.9960480884669998 19.625269738372523 5403.0 25.514166666666668 0.0 - - - - - - - 239.14285714285714 10 14 ATM;LOC651610 ataxia telangiectasia mutated;serine-protein kinase ATM-like 3741 471 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1905.[MT7]-AVLQEYGHEER.3y6_1.heavy 492.252 / 790.348 20328.0 22.351699829101562 48 18 10 10 10 2.943259093630137 26.422857936436422 0.0 3 0.9890595524042842 11.788215866340252 20328.0 109.2 0.0 - - - - - - - 272.25 40 8 TRIM32 tripartite motif-containing 32 3743 471 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1905.[MT7]-AVLQEYGHEER.3b4_1.heavy 492.252 / 556.357 34605.0 22.351699829101562 48 18 10 10 10 2.943259093630137 26.422857936436422 0.0 3 0.9890595524042842 11.788215866340252 34605.0 72.45123966942148 0.0 - - - - - - - 795.1428571428571 69 7 TRIM32 tripartite motif-containing 32 3745 471 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1905.[MT7]-AVLQEYGHEER.3y4_1.heavy 492.252 / 570.263 19602.0 22.351699829101562 48 18 10 10 10 2.943259093630137 26.422857936436422 0.0 3 0.9890595524042842 11.788215866340252 19602.0 115.82999999999998 0.0 - - - - - - - 314.6 39 10 TRIM32 tripartite motif-containing 32 3747 471 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1905.[MT7]-AVLQEYGHEER.3y5_1.heavy 492.252 / 627.284 62919.0 22.351699829101562 48 18 10 10 10 2.943259093630137 26.422857936436422 0.0 3 0.9890595524042842 11.788215866340252 62919.0 110.2382479338843 0.0 - - - - - - - 332.75 125 8 TRIM32 tripartite motif-containing 32 3749 472 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1904.[MT7]-DVPLALMAC[CAM]ALR.2y6_1.heavy 737.406 / 721.348 2219.0 42.625051498413086 37 14 9 6 8 3.2590474550308843 24.441543565795662 0.03820037841796875 4 0.9471185215778882 5.342910524178226 2219.0 12.170082539193272 3.0 - - - - - - - 243.85714285714286 6 7 PIK3CD phosphoinositide-3-kinase, catalytic, delta polypeptide 3751 472 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1904.[MT7]-DVPLALMAC[CAM]ALR.2y4_1.heavy 737.406 / 519.271 853.0 42.625051498413086 37 14 9 6 8 3.2590474550308843 24.441543565795662 0.03820037841796875 4 0.9471185215778882 5.342910524178226 853.0 -0.09999999999999998 13.0 - - - - - - - 219.57142857142858 2 7 PIK3CD phosphoinositide-3-kinase, catalytic, delta polypeptide 3753 472 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1904.[MT7]-DVPLALMAC[CAM]ALR.2y8_1.heavy 737.406 / 905.47 2901.0 42.625051498413086 37 14 9 6 8 3.2590474550308843 24.441543565795662 0.03820037841796875 4 0.9471185215778882 5.342910524178226 2901.0 19.78725677830941 0.0 - - - - - - - 222.0 5 10 PIK3CD phosphoinositide-3-kinase, catalytic, delta polypeptide 3755 472 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1904.[MT7]-DVPLALMAC[CAM]ALR.2y7_1.heavy 737.406 / 834.432 2731.0 42.625051498413086 37 14 9 6 8 3.2590474550308843 24.441543565795662 0.03820037841796875 4 0.9471185215778882 5.342910524178226 2731.0 9.341511638563052 0.0 - - - - - - - 208.77777777777777 5 9 PIK3CD phosphoinositide-3-kinase, catalytic, delta polypeptide 3757 473 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1903.[MT7]-YPANVAVDPVER.2y4_1.heavy 737.395 / 500.283 36512.0 26.80929946899414 45 15 10 10 10 1.264025216386601 49.381472066069456 0.0 3 0.9530374146436854 5.672466144614503 36512.0 46.65849410117565 0.0 - - - - - - - 317.0 73 5 EGF epidermal growth factor 3759 473 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1903.[MT7]-YPANVAVDPVER.2y8_1.heavy 737.395 / 884.484 2540.0 26.80929946899414 45 15 10 10 10 1.264025216386601 49.381472066069456 0.0 3 0.9530374146436854 5.672466144614503 2540.0 7.6517350157728705 2.0 - - - - - - - 317.0 11 5 EGF epidermal growth factor 3761 473 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1903.[MT7]-YPANVAVDPVER.2b4_1.heavy 737.395 / 590.305 5397.0 26.80929946899414 45 15 10 10 10 1.264025216386601 49.381472066069456 0.0 3 0.9530374146436854 5.672466144614503 5397.0 7.989259842519685 0.0 - - - - - - - 317.0 10 5 EGF epidermal growth factor 3763 473 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1903.[MT7]-YPANVAVDPVER.2y7_1.heavy 737.395 / 785.415 15875.0 26.80929946899414 45 15 10 10 10 1.264025216386601 49.381472066069456 0.0 3 0.9530374146436854 5.672466144614503 15875.0 25.75 0.0 - - - - - - - 317.0 31 2 EGF epidermal growth factor 3765 474 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A7108.[MT7]-QQTC[CAM]PTC[CAM]R.2y4_1.heavy 597.777 / 533.25 4819.0 13.709199905395508 50 20 10 10 10 3.3619590825723953 23.31598773390965 0.0 3 0.9919802254878455 13.771797173652905 4819.0 10.501962684298526 0.0 - - - - - - - 242.33333333333334 9 18 SYVN1 synovial apoptosis inhibitor 1, synoviolin 3767 474 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A7108.[MT7]-QQTC[CAM]PTC[CAM]R.2y5_1.heavy 597.777 / 693.281 5393.0 13.709199905395508 50 20 10 10 10 3.3619590825723953 23.31598773390965 0.0 3 0.9919802254878455 13.771797173652905 5393.0 54.02215302828935 0.0 - - - - - - - 196.71428571428572 10 14 SYVN1 synovial apoptosis inhibitor 1, synoviolin 3769 474 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A7108.[MT7]-QQTC[CAM]PTC[CAM]R.2y6_1.heavy 597.777 / 794.328 5048.0 13.709199905395508 50 20 10 10 10 3.3619590825723953 23.31598773390965 0.0 3 0.9919802254878455 13.771797173652905 5048.0 21.141183451759655 0.0 - - - - - - - 213.14285714285714 10 14 SYVN1 synovial apoptosis inhibitor 1, synoviolin 3771 474 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A7108.[MT7]-QQTC[CAM]PTC[CAM]R.2y7_1.heavy 597.777 / 922.387 9753.0 13.709199905395508 50 20 10 10 10 3.3619590825723953 23.31598773390965 0.0 3 0.9919802254878455 13.771797173652905 9753.0 62.77911983032873 0.0 - - - - - - - 181.21052631578948 19 19 SYVN1 synovial apoptosis inhibitor 1, synoviolin 3773 475 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A7001.[MT7]-LLDGFFIRPFYK[MT7].3b6_1.heavy 602.018 / 837.463 13253.0 43.19889831542969 43 13 10 10 10 1.3177570411527788 51.95412200693145 0.0 3 0.9067857926065941 4.010408392944533 13253.0 104.10201388099972 0.0 - - - - - - - 168.0 26 7 NEDD4L;NEDD4 neural precursor cell expressed, developmentally down-regulated 4-like;neural precursor cell expressed, developmentally down-regulated 4 3775 475 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A7001.[MT7]-LLDGFFIRPFYK[MT7].3y11_2.heavy 602.018 / 773.931 39590.0 43.19889831542969 43 13 10 10 10 1.3177570411527788 51.95412200693145 0.0 3 0.9067857926065941 4.010408392944533 39590.0 254.54928677879496 0.0 - - - - - - - 252.0 79 8 NEDD4L;NEDD4 neural precursor cell expressed, developmentally down-regulated 4-like;neural precursor cell expressed, developmentally down-regulated 4 3777 475 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A7001.[MT7]-LLDGFFIRPFYK[MT7].3y4_1.heavy 602.018 / 698.399 29860.0 43.19889831542969 43 13 10 10 10 1.3177570411527788 51.95412200693145 0.0 3 0.9067857926065941 4.010408392944533 29860.0 71.2130000533048 0.0 - - - - - - - 196.0 59 12 NEDD4L;NEDD4 neural precursor cell expressed, developmentally down-regulated 4-like;neural precursor cell expressed, developmentally down-regulated 4 3779 475 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A7001.[MT7]-LLDGFFIRPFYK[MT7].3y9_2.heavy 602.018 / 659.875 45965.0 43.19889831542969 43 13 10 10 10 1.3177570411527788 51.95412200693145 0.0 3 0.9067857926065941 4.010408392944533 45965.0 99.75570938389394 0.0 - - - - - - - 268.8 91 5 NEDD4L;NEDD4 neural precursor cell expressed, developmentally down-regulated 4-like;neural precursor cell expressed, developmentally down-regulated 4 3781 476 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2312.[MT7]-SQDVGRPK[MT7].3y6_1.heavy 392.231 / 815.486 933.0 14.22700023651123 44 14 10 10 10 3.0939690257710524 23.26712472104355 0.0 3 0.943728842237772 5.177994464379358 933.0 7.9743589743589745 0.0 - - - - - - - 0.0 1 0 UBA7 ubiquitin-like modifier activating enzyme 7 3783 476 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2312.[MT7]-SQDVGRPK[MT7].3b4_1.heavy 392.231 / 574.295 4197.0 14.22700023651123 44 14 10 10 10 3.0939690257710524 23.26712472104355 0.0 3 0.943728842237772 5.177994464379358 4197.0 20.35454935622317 0.0 - - - - - - - 208.35714285714286 8 14 UBA7 ubiquitin-like modifier activating enzyme 7 3785 476 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2312.[MT7]-SQDVGRPK[MT7].3y2_1.heavy 392.231 / 388.268 33574.0 14.22700023651123 44 14 10 10 10 3.0939690257710524 23.26712472104355 0.0 3 0.943728842237772 5.177994464379358 33574.0 57.58922120295063 0.0 - - - - - - - 766.0 67 7 UBA7 ubiquitin-like modifier activating enzyme 7 3787 476 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2312.[MT7]-SQDVGRPK[MT7].3b3_1.heavy 392.231 / 475.227 58055.0 14.22700023651123 44 14 10 10 10 3.0939690257710524 23.26712472104355 0.0 3 0.943728842237772 5.177994464379358 58055.0 173.9783279742765 0.0 - - - - - - - 722.7 116 10 UBA7 ubiquitin-like modifier activating enzyme 7 3789 477 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2510.[MT7]-VLVVGAGGIGC[CAM]ELLK[MT7].3y6_1.heavy 591.69 / 863.478 70864.0 37.53499984741211 44 14 10 10 10 12.92195606677679 7.738766443967927 0.0 3 0.9373250228006257 4.903661364920747 70864.0 191.67752058435013 0.0 - - - - - - - 409.5 141 4 UBA2 ubiquitin-like modifier activating enzyme 2 3791 477 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2510.[MT7]-VLVVGAGGIGC[CAM]ELLK[MT7].3b4_1.heavy 591.69 / 555.399 47710.0 37.53499984741211 44 14 10 10 10 12.92195606677679 7.738766443967927 0.0 3 0.9373250228006257 4.903661364920747 47710.0 224.2908545638102 0.0 - - - - - - - 351.0 95 6 UBA2 ubiquitin-like modifier activating enzyme 2 3793 477 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2510.[MT7]-VLVVGAGGIGC[CAM]ELLK[MT7].3b5_1.heavy 591.69 / 612.42 38121.0 37.53499984741211 44 14 10 10 10 12.92195606677679 7.738766443967927 0.0 3 0.9373250228006257 4.903661364920747 38121.0 181.66293382312625 0.0 - - - - - - - 327.6 76 5 UBA2 ubiquitin-like modifier activating enzyme 2 3795 477 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2510.[MT7]-VLVVGAGGIGC[CAM]ELLK[MT7].3b8_1.heavy 591.69 / 797.5 85130.0 37.53499984741211 44 14 10 10 10 12.92195606677679 7.738766443967927 0.0 3 0.9373250228006257 4.903661364920747 85130.0 220.9111254692501 0.0 - - - - - - - 260.0 170 9 UBA2 ubiquitin-like modifier activating enzyme 2 3797 478 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2514.[MT7]-NLFDNLIEFLQK[MT7].3y3_1.heavy 594.673 / 532.357 31857.0 51.772098541259766 47 17 10 10 10 4.336528547441191 23.059919681378766 0.0 3 0.9765846217533026 8.049347718532456 31857.0 113.63974025835265 0.0 - - - - - - - 236.9 63 20 ORC3 origin recognition complex, subunit 3 3799 478 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2514.[MT7]-NLFDNLIEFLQK[MT7].3b6_1.heavy 594.673 / 861.459 46229.0 51.772098541259766 47 17 10 10 10 4.336528547441191 23.059919681378766 0.0 3 0.9765846217533026 8.049347718532456 46229.0 520.9279320464327 0.0 - - - - - - - 594.7142857142857 92 7 ORC3 origin recognition complex, subunit 3 3801 478 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2514.[MT7]-NLFDNLIEFLQK[MT7].3y4_1.heavy 594.673 / 679.426 29387.0 51.772098541259766 47 17 10 10 10 4.336528547441191 23.059919681378766 0.0 3 0.9765846217533026 8.049347718532456 29387.0 99.76241461038106 0.0 - - - - - - - 235.9 58 20 ORC3 origin recognition complex, subunit 3 3803 478 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2514.[MT7]-NLFDNLIEFLQK[MT7].3y5_1.heavy 594.673 / 808.469 37554.0 51.772098541259766 47 17 10 10 10 4.336528547441191 23.059919681378766 0.0 3 0.9765846217533026 8.049347718532456 37554.0 106.35349153262197 0.0 - - - - - - - 594.5714285714286 75 7 ORC3 origin recognition complex, subunit 3 3805 479 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6894.[MT7]-ALGATFGPLLLR.2y8_1.heavy 686.925 / 916.562 21063.0 41.274349212646484 43 17 10 6 10 3.41572585881549 29.276354172836967 0.039398193359375 3 0.9707128502875869 7.193796385572829 21063.0 70.77894310344828 0.0 - - - - - - - 289.5 42 4 PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) 3807 479 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6894.[MT7]-ALGATFGPLLLR.2y10_1.heavy 686.925 / 1044.62 25315.0 41.274349212646484 43 17 10 6 10 3.41572585881549 29.276354172836967 0.039398193359375 3 0.9707128502875869 7.193796385572829 25315.0 105.07963864570306 0.0 - - - - - - - 330.85714285714283 50 7 PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) 3809 479 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6894.[MT7]-ALGATFGPLLLR.2y11_1.heavy 686.925 / 1157.7 22223.0 41.274349212646484 43 17 10 6 10 3.41572585881549 29.276354172836967 0.039398193359375 3 0.9707128502875869 7.193796385572829 22223.0 55.198137128072446 0.0 - - - - - - - 308.8 44 5 PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) 3811 479 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6894.[MT7]-ALGATFGPLLLR.2y7_1.heavy 686.925 / 815.514 14686.0 41.274349212646484 43 17 10 6 10 3.41572585881549 29.276354172836967 0.039398193359375 3 0.9707128502875869 7.193796385572829 14686.0 13.598578665831326 0.0 - - - - - - - 289.5 29 8 PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) 3813 480 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6890.[MT7]-YQQDQIVK[MT7].2y4_1.heavy 655.371 / 631.426 11477.0 21.95580005645752 39 13 10 6 10 1.6157890443233445 41.066676481995486 0.03999900817871094 3 0.9277455523575291 4.563307713988888 11477.0 23.46408888888889 0.0 - - - - - - - 731.25 22 8 PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) 3815 480 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6890.[MT7]-YQQDQIVK[MT7].2b4_1.heavy 655.371 / 679.317 11252.0 21.95580005645752 39 13 10 6 10 1.6157890443233445 41.066676481995486 0.03999900817871094 3 0.9277455523575291 4.563307713988888 11252.0 58.01031111111111 0.0 - - - - - - - 300.0 22 6 PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) 3817 480 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6890.[MT7]-YQQDQIVK[MT7].2b5_1.heavy 655.371 / 807.375 7876.0 21.95580005645752 39 13 10 6 10 1.6157890443233445 41.066676481995486 0.03999900817871094 3 0.9277455523575291 4.563307713988888 7876.0 44.68900740740741 0.0 - - - - - - - 289.2857142857143 15 7 PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) 3819 480 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6890.[MT7]-YQQDQIVK[MT7].2y7_1.heavy 655.371 / 1002.57 10127.0 21.95580005645752 39 13 10 6 10 1.6157890443233445 41.066676481995486 0.03999900817871094 3 0.9277455523575291 4.563307713988888 10127.0 36.68224444444444 0.0 - - - - - - - 270.0 20 10 PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) 3821 481 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A7132.[MT7]-VYEILELC[CAM]R.2b3_1.heavy 669.864 / 536.284 16762.0 37.17369842529297 48 18 10 10 10 4.84485626137975 20.640447230011596 0.0 3 0.9816648955529762 9.100282287117187 16762.0 80.9358573388203 0.0 - - - - - - - 340.2 33 5 UBE3A ubiquitin protein ligase E3A 3823 481 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A7132.[MT7]-VYEILELC[CAM]R.2y8_1.heavy 669.864 / 1095.55 25264.0 37.17369842529297 48 18 10 10 10 4.84485626137975 20.640447230011596 0.0 3 0.9816648955529762 9.100282287117187 25264.0 74.33646090534978 0.0 - - - - - - - 347.14285714285717 50 7 UBE3A ubiquitin protein ligase E3A 3825 481 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A7132.[MT7]-VYEILELC[CAM]R.2y6_1.heavy 669.864 / 803.444 13361.0 37.17369842529297 48 18 10 10 10 4.84485626137975 20.640447230011596 0.0 3 0.9816648955529762 9.100282287117187 13361.0 41.78748971193416 0.0 - - - - - - - 381.85714285714283 26 7 UBE3A ubiquitin protein ligase E3A 3827 481 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A7132.[MT7]-VYEILELC[CAM]R.2y7_1.heavy 669.864 / 932.487 13118.0 37.17369842529297 48 18 10 10 10 4.84485626137975 20.640447230011596 0.0 3 0.9816648955529762 9.100282287117187 13118.0 18.357598406435258 0.0 - - - - - - - 340.2 26 10 UBE3A ubiquitin protein ligase E3A 3829 482 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6794.[MT7]-TYQLLAR.2b3_1.heavy 504.802 / 537.279 11939.0 27.56410026550293 50 20 10 10 10 9.23879434471339 10.823923151533496 0.0 3 0.996908721489029 22.19122933978353 11939.0 24.613384876815637 0.0 - - - - - - - 323.0 23 3 PIK3CG phosphoinositide-3-kinase, catalytic, gamma polypeptide 3831 482 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6794.[MT7]-TYQLLAR.2y5_1.heavy 504.802 / 600.383 7421.0 27.56410026550293 50 20 10 10 10 9.23879434471339 10.823923151533496 0.0 3 0.996908721489029 22.19122933978353 7421.0 28.731507427940578 0.0 - - - - - - - 323.0 14 4 PIK3CG phosphoinositide-3-kinase, catalytic, gamma polypeptide 3833 482 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6794.[MT7]-TYQLLAR.2b4_1.heavy 504.802 / 650.363 8067.0 27.56410026550293 50 20 10 10 10 9.23879434471339 10.823923151533496 0.0 3 0.996908721489029 22.19122933978353 8067.0 7.458125054876911 1.0 - - - - - - - 323.0 16 5 PIK3CG phosphoinositide-3-kinase, catalytic, gamma polypeptide 3835 482 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6794.[MT7]-TYQLLAR.2y1_1.heavy 504.802 / 175.119 N/A 27.56410026550293 50 20 10 10 10 9.23879434471339 10.823923151533496 0.0 3 0.996908721489029 22.19122933978353 9035.0 2.2128021759726164 1.0 - - - - - - - 323.0 18 1 PIK3CG phosphoinositide-3-kinase, catalytic, gamma polypeptide 3837 483 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 ENO_ECO24.IQLVGDDLFVTNTK.2y8.peptide 781.92 / 937.5 120207.0 36.707600911458336 23 -3 10 6 10 null 0.0 0.039600372314453125 3 0.0 0.0 120207.0 123.34704157916185 0.0 - - - - - - - 494.0 240 1 3839 483 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 ENO_ECO24.IQLVGDDLFVTNTK.2y6.peptide 781.92 / 709.39 272008.0 36.707600911458336 23 -3 10 6 10 null 0.0 0.039600372314453125 3 0.0 0.0 272008.0 152.91915634541445 0.0 - - - - - - - 1851.5 544 4 3841 483 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 ENO_ECO24.IQLVGDDLFVTNTK.2y5.peptide 781.92 / 562.32 298172.0 36.707600911458336 23 -3 10 6 10 null 0.0 0.039600372314453125 3 0.0 0.0 298172.0 103.7322468958969 0.0 - - - - - - - 1481.0 596 1 3843 484 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6697.[MT7]-VFIDQNLSPGK[MT7].2y4_1.heavy 753.432 / 532.321 9667.0 29.675800323486328 46 16 10 10 10 5.159416906211805 19.38203518300732 0.0 3 0.9670123951196635 6.77619398149833 9667.0 16.962216596128044 0.0 - - - - - - - 333.0 19 4 TFDP1 transcription factor Dp-1 3845 484 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6697.[MT7]-VFIDQNLSPGK[MT7].2y8_1.heavy 753.432 / 1002.53 3667.0 29.675800323486328 46 16 10 10 10 5.159416906211805 19.38203518300732 0.0 3 0.9670123951196635 6.77619398149833 3667.0 21.352291291291287 0.0 - - - - - - - 333.0 7 2 TFDP1 transcription factor Dp-1 3847 484 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6697.[MT7]-VFIDQNLSPGK[MT7].2b4_1.heavy 753.432 / 619.357 6000.0 29.675800323486328 46 16 10 10 10 5.159416906211805 19.38203518300732 0.0 3 0.9670123951196635 6.77619398149833 6000.0 26.293609951780866 0.0 - - - - - - - 333.0 12 4 TFDP1 transcription factor Dp-1 3849 484 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6697.[MT7]-VFIDQNLSPGK[MT7].2b6_1.heavy 753.432 / 861.459 1000.0 29.675800323486328 46 16 10 10 10 5.159416906211805 19.38203518300732 0.0 3 0.9670123951196635 6.77619398149833 1000.0 2.612725253385418 5.0 - - - - - - - 333.0 3 5 TFDP1 transcription factor Dp-1 3851 485 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 RBSB_ECOLI.LAATIAQLPDQIGAK.3y7.peptide 503.96 / 728.39 112935.0 31.773799896240234 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 112935.0 125.91603448275862 0.0 - - - - - - - 319.0 225 1 3853 485 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 RBSB_ECOLI.LAATIAQLPDQIGAK.3y6.peptide 503.96 / 631.34 20099.0 31.773799896240234 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 20099.0 22.39273993513702 0.0 - - - - - - - 319.0 40 3 3855 485 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 RBSB_ECOLI.LAATIAQLPDQIGAK.3y5.peptide 503.96 / 516.31 19461.0 31.773799896240234 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 19461.0 11.374677566079539 0.0 - - - - - - - 319.0 38 1 3857 486 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6885.[MT7]-FLLQHLGR.3b4_1.heavy 376.565 / 646.404 20667.0 31.051000595092773 50 20 10 10 10 8.069279758644099 12.392679767097732 0.0 3 0.9925415611157885 14.281311839789703 20667.0 91.80867025946486 0.0 - - - - - - - 333.0 41 2 PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) 3859 486 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6885.[MT7]-FLLQHLGR.3b3_1.heavy 376.565 / 518.346 29333.0 31.051000595092773 50 20 10 10 10 8.069279758644099 12.392679767097732 0.0 3 0.9925415611157885 14.281311839789703 29333.0 122.37633939786863 0.0 - - - - - - - 333.0 58 6 PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) 3861 486 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6885.[MT7]-FLLQHLGR.3y4_1.heavy 376.565 / 482.283 31000.0 31.051000595092773 50 20 10 10 10 8.069279758644099 12.392679767097732 0.0 3 0.9925415611157885 14.281311839789703 31000.0 46.30453939696818 1.0 - - - - - - - 333.0 72 1 PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) 3863 486 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6885.[MT7]-FLLQHLGR.3b2_1.heavy 376.565 / 405.262 25333.0 31.051000595092773 50 20 10 10 10 8.069279758644099 12.392679767097732 0.0 3 0.9925415611157885 14.281311839789703 25333.0 93.17912608782827 0.0 - - - - - - - 333.0 50 1 PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) 3865 487 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6698.[MT7]-VFIDQNLSPGK[MT7].3b6_1.heavy 502.624 / 861.459 3000.0 29.675800323486328 38 8 10 10 10 0.7593956642651304 82.777354218066 0.0 3 0.760335523750254 2.4687570070507636 3000.0 8.84538752005346 1.0 - - - - - - - 333.0 7 3 TFDP1 transcription factor Dp-1 3867 487 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6698.[MT7]-VFIDQNLSPGK[MT7].3b4_1.heavy 502.624 / 619.357 5000.0 29.675800323486328 38 8 10 10 10 0.7593956642651304 82.777354218066 0.0 3 0.760335523750254 2.4687570070507636 5000.0 7.646356785614391 0.0 - - - - - - - 333.0 10 3 TFDP1 transcription factor Dp-1 3869 487 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6698.[MT7]-VFIDQNLSPGK[MT7].3b5_1.heavy 502.624 / 747.416 6333.0 29.675800323486328 38 8 10 10 10 0.7593956642651304 82.777354218066 0.0 3 0.760335523750254 2.4687570070507636 6333.0 7.28308300630063 0.0 - - - - - - - 333.0 12 5 TFDP1 transcription factor Dp-1 3871 487 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6698.[MT7]-VFIDQNLSPGK[MT7].3y4_1.heavy 502.624 / 532.321 19333.0 29.675800323486328 38 8 10 10 10 0.7593956642651304 82.777354218066 0.0 3 0.760335523750254 2.4687570070507636 19333.0 54.49181409295352 0.0 - - - - - - - 333.0 38 3 TFDP1 transcription factor Dp-1 3873 488 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6896.[MT7]-AALQALGVAEGGER.2y8_1.heavy 743.411 / 774.374 48333.0 30.173099517822266 46 16 10 10 10 3.5818860343917307 22.363851050771792 0.0 3 0.9635720248671185 6.446405008862779 48333.0 72.68738112777444 0.0 - - - - - - - 333.0 96 6 PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) 3875 488 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6896.[MT7]-AALQALGVAEGGER.2b4_1.heavy 743.411 / 528.326 50000.0 30.173099517822266 46 16 10 10 10 3.5818860343917307 22.363851050771792 0.0 3 0.9635720248671185 6.446405008862779 50000.0 100.15837911877894 0.0 - - - - - - - 333.0 100 7 PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) 3877 488 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6896.[MT7]-AALQALGVAEGGER.2y10_1.heavy 743.411 / 958.495 46333.0 30.173099517822266 46 16 10 10 10 3.5818860343917307 22.363851050771792 0.0 3 0.9635720248671185 6.446405008862779 46333.0 89.42268999999999 0.0 - - - - - - - 333.0 92 4 PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) 3879 488 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A6896.[MT7]-AALQALGVAEGGER.2y11_1.heavy 743.411 / 1086.55 25667.0 30.173099517822266 46 16 10 10 10 3.5818860343917307 22.363851050771792 0.0 3 0.9635720248671185 6.446405008862779 25667.0 102.48840807807808 0.0 - - - - - - - 333.0 51 2 PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) 3881 489 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1599.[MT7]-AFGVPVR.2y5_1.heavy 445.272 / 527.33 10418.0 26.762800216674805 50 20 10 10 10 5.808184476500774 17.21708399665819 0.0 3 0.9904749980106621 12.635269437705665 10418.0 19.893441621816695 0.0 - - - - - - - 316.0 20 2 CDK2 cyclin-dependent kinase 2 3883 489 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1599.[MT7]-AFGVPVR.2b4_1.heavy 445.272 / 519.305 15153.0 26.762800216674805 50 20 10 10 10 5.808184476500774 17.21708399665819 0.0 3 0.9904749980106621 12.635269437705665 15153.0 16.865112988384368 0.0 - - - - - - - 316.0 30 1 CDK2 cyclin-dependent kinase 2 3885 489 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1599.[MT7]-AFGVPVR.2y6_1.heavy 445.272 / 674.398 15784.0 26.762800216674805 50 20 10 10 10 5.808184476500774 17.21708399665819 0.0 3 0.9904749980106621 12.635269437705665 15784.0 22.142790445655965 0.0 - - - - - - - 316.0 31 1 CDK2 cyclin-dependent kinase 2 3887 489 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1599.[MT7]-AFGVPVR.2y1_1.heavy 445.272 / 175.119 N/A 26.762800216674805 50 20 10 10 10 5.808184476500774 17.21708399665819 0.0 3 0.9904749980106621 12.635269437705665 7892.0 4.4379700567087 5.0 - - - - - - - 316.0 23 3 CDK2 cyclin-dependent kinase 2 3889 490 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1598.[MT7]-IIPEK[MT7].2y4_1.heavy 444.294 / 630.394 66399.0 24.218900680541992 44 14 10 10 10 8.4769155372098 11.796743704835269 0.0 3 0.9397002896429547 5.000321205427641 66399.0 92.18082429501084 0.0 - - - - - - - 277.0 132 1 TTN;BTRC titin;beta-transducin repeat containing 3891 490 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1598.[MT7]-IIPEK[MT7].2y3_1.heavy 444.294 / 517.31 270577.0 24.218900680541992 44 14 10 10 10 8.4769155372098 11.796743704835269 0.0 3 0.9397002896429547 5.000321205427641 270577.0 126.48930784406377 0.0 - - - - - - - 277.0 541 1 TTN;BTRC titin;beta-transducin repeat containing 3893 490 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1598.[MT7]-IIPEK[MT7].2b1_1.heavy 444.294 / 258.193 61143.0 24.218900680541992 44 14 10 10 10 8.4769155372098 11.796743704835269 0.0 3 0.9397002896429547 5.000321205427641 61143.0 88.01554847030397 0.0 - - - - - - - 277.0 122 1 TTN;BTRC titin;beta-transducin repeat containing 3895 490 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1598.[MT7]-IIPEK[MT7].2y1_1.heavy 444.294 / 291.215 41500.0 24.218900680541992 44 14 10 10 10 8.4769155372098 11.796743704835269 0.0 3 0.9397002896429547 5.000321205427641 41500.0 6.79663201697736 1.0 - - - - - - - 1383.0 372 1 TTN;BTRC titin;beta-transducin repeat containing 3897 491 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A7057.[MT7]-LLAFALADTK[MT7].2y4_1.heavy 675.915 / 578.327 6212.0 39.90629959106445 48 18 10 10 10 3.185150427741103 25.07256373771103 0.0 3 0.9842582169424319 9.823450086011169 6212.0 14.724740740740742 0.0 - - - - - - - 289.8 12 5 ANAPC4 anaphase promoting complex subunit 4 3899 491 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A7057.[MT7]-LLAFALADTK[MT7].2y5_1.heavy 675.915 / 691.411 6212.0 39.90629959106445 48 18 10 10 10 3.185150427741103 25.07256373771103 0.0 3 0.9842582169424319 9.823450086011169 6212.0 14.470968049594658 0.0 - - - - - - - 276.0 12 6 ANAPC4 anaphase promoting complex subunit 4 3901 491 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A7057.[MT7]-LLAFALADTK[MT7].2y6_1.heavy 675.915 / 762.448 9939.0 39.90629959106445 48 18 10 10 10 3.185150427741103 25.07256373771103 0.0 3 0.9842582169424319 9.823450086011169 9939.0 19.416504478447468 0.0 - - - - - - - 295.7142857142857 19 7 ANAPC4 anaphase promoting complex subunit 4 3903 491 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A7057.[MT7]-LLAFALADTK[MT7].2y7_1.heavy 675.915 / 909.516 6626.0 39.90629959106445 48 18 10 10 10 3.185150427741103 25.07256373771103 0.0 3 0.9842582169424319 9.823450086011169 6626.0 36.87513043478261 0.0 - - - - - - - 276.0 13 6 ANAPC4 anaphase promoting complex subunit 4 3905 492 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1597.[MT7]-DFGEK[MT7].2y4_1.heavy 442.242 / 624.347 30772.0 19.199775218963623 38 14 10 6 8 1.892527789908631 42.07613912085586 0.03930091857910156 4 0.9454568979784921 5.260153660875079 30772.0 168.58381145855557 0.0 - - - - - - - 301.5 61 10 TRIM32 tripartite motif-containing 32 3907 492 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1597.[MT7]-DFGEK[MT7].2b4_1.heavy 442.242 / 593.269 9453.0 19.199775218963623 38 14 10 6 8 1.892527789908631 42.07613912085586 0.03930091857910156 4 0.9454568979784921 5.260153660875079 9453.0 19.320573276757365 0.0 - - - - - - - 301.5 18 10 TRIM32 tripartite motif-containing 32 3909 492 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1597.[MT7]-DFGEK[MT7].2y3_1.heavy 442.242 / 477.279 17297.0 19.199775218963623 38 14 10 6 8 1.892527789908631 42.07613912085586 0.03930091857910156 4 0.9454568979784921 5.260153660875079 17297.0 84.32678852259578 0.0 - - - - - - - 301.5 34 12 TRIM32 tripartite motif-containing 32 3911 492 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1597.[MT7]-DFGEK[MT7].2y1_1.heavy 442.242 / 291.215 14682.0 19.199775218963623 38 14 10 6 8 1.892527789908631 42.07613912085586 0.03930091857910156 4 0.9454568979784921 5.260153660875079 14682.0 8.951580012856496 3.0 - - - - - - - 2240.714285714286 40 7 TRIM32 tripartite motif-containing 32 3913 493 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1596.[MT7]-ASDDGK[MT7].2y4_1.heavy 440.734 / 578.29 1208.0 12.591125249862671 38 16 6 8 8 1.883971701224646 42.27282474962946 0.018700599670410156 4 0.9632471990460699 6.417678634006684 1208.0 -0.5 2.0 - - - - - - - 154.60526315789474 2 38 RAF1 v-raf-1 murine leukemia viral oncogene homolog 1 3915 493 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1596.[MT7]-ASDDGK[MT7].2y5_1.heavy 440.734 / 665.322 4661.0 12.591125249862671 38 16 6 8 8 1.883971701224646 42.27282474962946 0.018700599670410156 4 0.9632471990460699 6.417678634006684 4661.0 12.851833258284872 0.0 - - - - - - - 136.02777777777777 9 36 RAF1 v-raf-1 murine leukemia viral oncogene homolog 1 3917 493 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1596.[MT7]-ASDDGK[MT7].2b4_1.heavy 440.734 / 533.232 5812.0 12.591125249862671 38 16 6 8 8 1.883971701224646 42.27282474962946 0.018700599670410156 4 0.9632471990460699 6.417678634006684 5812.0 3.366023166023166 1.0 - - - - - - - 645.7777777777778 17 9 RAF1 v-raf-1 murine leukemia viral oncogene homolog 1 3919 493 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1596.[MT7]-ASDDGK[MT7].2y3_1.heavy 440.734 / 463.263 3625.0 12.591125249862671 38 16 6 8 8 1.883971701224646 42.27282474962946 0.018700599670410156 4 0.9632471990460699 6.417678634006684 3625.0 5.587950844421641 0.0 - - - - - - - 218.46153846153845 7 39 RAF1 v-raf-1 murine leukemia viral oncogene homolog 1 3921 494 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1595.[MT7]-ALYPK[MT7].2y4_1.heavy 440.281 / 664.415 19000.0 22.14109992980957 44 14 10 10 10 2.2515157144087192 37.60848902303629 0.0 3 0.9492729318849908 5.456187655245166 19000.0 149.79253112033197 0.0 - - - - - - - 391.0 38 8 BTRC beta-transducin repeat containing 3923 494 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1595.[MT7]-ALYPK[MT7].2b3_1.heavy 440.281 / 492.294 33670.0 22.14109992980957 44 14 10 10 10 2.2515157144087192 37.60848902303629 0.0 3 0.9492729318849908 5.456187655245166 33670.0 155.58782849239282 0.0 - - - - - - - 361.0 67 4 BTRC beta-transducin repeat containing 3925 494 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1595.[MT7]-ALYPK[MT7].2y3_1.heavy 440.281 / 551.331 28139.0 22.14109992980957 44 14 10 10 10 2.2515157144087192 37.60848902303629 0.0 3 0.9492729318849908 5.456187655245166 28139.0 18.526834367732125 1.0 - - - - - - - 361.0 60 4 BTRC beta-transducin repeat containing 3927 494 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1595.[MT7]-ALYPK[MT7].2y2_1.heavy 440.281 / 388.268 97644.0 22.14109992980957 44 14 10 10 10 2.2515157144087192 37.60848902303629 0.0 3 0.9492729318849908 5.456187655245166 97644.0 94.48266074551788 0.0 - - - - - - - 790.5714285714286 195 7 BTRC beta-transducin repeat containing 3929 495 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1594.[MT7]-EAELK[MT7].2b3_1.heavy 439.265 / 474.232 13794.0 18.493499755859375 48 18 10 10 10 8.358020205274237 11.964555904865616 0.0 3 0.9812306636921526 8.994070287228615 13794.0 80.06153509916491 1.0 - - - - - - - 273.85714285714283 27 7 TBC1D9B;SEPT6;KIAA0802;ANKRD1;C10orf28;C6orf174;GNL3L;USP40;SEPT11;WEE1;OFD1;SPAG9 TBC1 domain family, member 9B (with GRAM domain);septin 6;KIAA0802;ankyrin repeat domain 1 (cardiac muscle);chromosome 10 open reading frame 28;chromosome 6 open reading frame 174;guanine nucleotide binding protein-like 3 (nucleolar)-like;ubiquitin specific peptidase 40;septin 11;WEE1 homolog (S. pombe);oral-facial-digital syndrome 1;sperm associated antigen 9 3931 495 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1594.[MT7]-EAELK[MT7].2y4_1.heavy 439.265 / 604.379 33909.0 18.493499755859375 48 18 10 10 10 8.358020205274237 11.964555904865616 0.0 3 0.9812306636921526 8.994070287228615 33909.0 70.79740356453627 0.0 - - - - - - - 766.375 67 8 TBC1D9B;SEPT6;KIAA0802;ANKRD1;C10orf28;C6orf174;GNL3L;USP40;SEPT11;WEE1;OFD1;SPAG9 TBC1 domain family, member 9B (with GRAM domain);septin 6;KIAA0802;ankyrin repeat domain 1 (cardiac muscle);chromosome 10 open reading frame 28;chromosome 6 open reading frame 174;guanine nucleotide binding protein-like 3 (nucleolar)-like;ubiquitin specific peptidase 40;septin 11;WEE1 homolog (S. pombe);oral-facial-digital syndrome 1;sperm associated antigen 9 3933 495 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1594.[MT7]-EAELK[MT7].2b4_1.heavy 439.265 / 587.316 4215.0 18.493499755859375 48 18 10 10 10 8.358020205274237 11.964555904865616 0.0 3 0.9812306636921526 8.994070287228615 4215.0 2.0010443864229766 11.0 - - - - - - - 273.85714285714283 43 7 TBC1D9B;SEPT6;KIAA0802;ANKRD1;C10orf28;C6orf174;GNL3L;USP40;SEPT11;WEE1;OFD1;SPAG9 TBC1 domain family, member 9B (with GRAM domain);septin 6;KIAA0802;ankyrin repeat domain 1 (cardiac muscle);chromosome 10 open reading frame 28;chromosome 6 open reading frame 174;guanine nucleotide binding protein-like 3 (nucleolar)-like;ubiquitin specific peptidase 40;septin 11;WEE1 homolog (S. pombe);oral-facial-digital syndrome 1;sperm associated antigen 9 3935 495 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A1594.[MT7]-EAELK[MT7].2y3_1.heavy 439.265 / 533.341 9196.0 18.493499755859375 48 18 10 10 10 8.358020205274237 11.964555904865616 0.0 3 0.9812306636921526 8.994070287228615 9196.0 17.57677291604605 0.0 - - - - - - - 694.5 18 8 TBC1D9B;SEPT6;KIAA0802;ANKRD1;C10orf28;C6orf174;GNL3L;USP40;SEPT11;WEE1;OFD1;SPAG9 TBC1 domain family, member 9B (with GRAM domain);septin 6;KIAA0802;ankyrin repeat domain 1 (cardiac muscle);chromosome 10 open reading frame 28;chromosome 6 open reading frame 174;guanine nucleotide binding protein-like 3 (nucleolar)-like;ubiquitin specific peptidase 40;septin 11;WEE1 homolog (S. pombe);oral-facial-digital syndrome 1;sperm associated antigen 9 3937 496 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2406.[MT7]-LLFEVFDENR.2y8_1.heavy 713.378 / 1055.48 84134.0 43.19889831542969 50 20 10 10 10 14.673812399656414 6.814861555838174 0.0 3 0.9961459591568438 19.873054901252978 84134.0 311.56063190020103 0.0 - - - - - - - 295.22222222222223 168 9 NEDD4L;NEDD4 neural precursor cell expressed, developmentally down-regulated 4-like;neural precursor cell expressed, developmentally down-regulated 4 3939 496 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2406.[MT7]-LLFEVFDENR.2y9_1.heavy 713.378 / 1168.56 69277.0 43.19889831542969 50 20 10 10 10 14.673812399656414 6.814861555838174 0.0 3 0.9961459591568438 19.873054901252978 69277.0 514.5410836886994 0.0 - - - - - - - 234.5 138 6 NEDD4L;NEDD4 neural precursor cell expressed, developmentally down-regulated 4-like;neural precursor cell expressed, developmentally down-regulated 4 3941 496 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2406.[MT7]-LLFEVFDENR.2y6_1.heavy 713.378 / 779.368 50199.0 43.19889831542969 50 20 10 10 10 14.673812399656414 6.814861555838174 0.0 3 0.9961459591568438 19.873054901252978 50199.0 98.58924592467103 0.0 - - - - - - - 692.8571428571429 100 7 NEDD4L;NEDD4 neural precursor cell expressed, developmentally down-regulated 4-like;neural precursor cell expressed, developmentally down-regulated 4 3943 496 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2406.[MT7]-LLFEVFDENR.2y7_1.heavy 713.378 / 908.411 57392.0 43.19889831542969 50 20 10 10 10 14.673812399656414 6.814861555838174 0.0 3 0.9961459591568438 19.873054901252978 57392.0 164.5748050666433 0.0 - - - - - - - 268.0 114 7 NEDD4L;NEDD4 neural precursor cell expressed, developmentally down-regulated 4-like;neural precursor cell expressed, developmentally down-regulated 4 3945 497 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2400.[MT7]-TIDGILLLIER.2y8_1.heavy 700.436 / 926.603 16707.0 46.47974967956543 43 18 10 5 10 3.7099230111881902 21.114047765461102 0.042697906494140625 3 0.9876208057179973 11.080698600576628 16707.0 90.82222084213141 0.0 - - - - - - - 242.16666666666666 33 12 CUL4B;CUL4A cullin 4B;cullin 4A 3947 497 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2400.[MT7]-TIDGILLLIER.2y9_1.heavy 700.436 / 1041.63 8063.0 46.47974967956543 43 18 10 5 10 3.7099230111881902 21.114047765461102 0.042697906494140625 3 0.9876208057179973 11.080698600576628 8063.0 28.432422537382458 0.0 - - - - - - - 235.41666666666666 16 12 CUL4B;CUL4A cullin 4B;cullin 4A 3949 497 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2400.[MT7]-TIDGILLLIER.2b6_1.heavy 700.436 / 757.458 4987.0 46.47974967956543 43 18 10 5 10 3.7099230111881902 21.114047765461102 0.042697906494140625 3 0.9876208057179973 11.080698600576628 4987.0 32.028925320520564 2.0 - - - - - - - 224.8235294117647 9 17 CUL4B;CUL4A cullin 4B;cullin 4A 3951 497 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2400.[MT7]-TIDGILLLIER.2y10_1.heavy 700.436 / 1154.71 6899.0 46.47974967956543 43 18 10 5 10 3.7099230111881902 21.114047765461102 0.042697906494140625 3 0.9876208057179973 11.080698600576628 6899.0 157.92891566265058 0.0 - - - - - - - 203.11111111111111 13 9 CUL4B;CUL4A cullin 4B;cullin 4A 3953 498 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 BLAT_ECOLX.VAGPLLRSALPAGWFIADK.3y7.peptide 661.38 / 836.43 271919.0 40.16320037841797 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 271919.0 320.0016762514394 0.0 - - - - - - - 345.6666666666667 543 3 3955 498 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 BLAT_ECOLX.VAGPLLRSALPAGWFIADK.3y9.peptide 661.38 / 502.76 493476.0 40.16320037841797 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 493476.0 304.6234819420855 0.0 - - - - - - - 829.0 986 1 3957 498 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 BLAT_ECOLX.VAGPLLRSALPAGWFIADK.3y17.peptide 661.38 / 906.51 385910.0 40.16320037841797 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 385910.0 66.31799897787141 1.0 - - - - - - - 1347.5 839 2 3959 499 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A7035.[MT7]-IHGALLILNELVR.3y6_1.heavy 535.67 / 743.441 22930.0 42.99209976196289 48 18 10 10 10 5.3671990318726035 18.631692137027052 0.0 3 0.9888323999510344 11.667490201035303 22930.0 136.77543859649123 0.0 - - - - - - - 285.0 45 3 MTOR mechanistic target of rapamycin (serine/threonine kinase) 3961 499 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A7035.[MT7]-IHGALLILNELVR.3b4_1.heavy 535.67 / 523.311 24984.0 42.99209976196289 48 18 10 10 10 5.3671990318726035 18.631692137027052 0.0 3 0.9888323999510344 11.667490201035303 24984.0 8.952962382033954 0.0 - - - - - - - 239.4 49 5 MTOR mechanistic target of rapamycin (serine/threonine kinase) 3963 499 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A7035.[MT7]-IHGALLILNELVR.3b5_1.heavy 535.67 / 636.395 24299.0 42.99209976196289 48 18 10 10 10 5.3671990318726035 18.631692137027052 0.0 3 0.9888323999510344 11.667490201035303 24299.0 139.20840862917584 0.0 - - - - - - - 171.0 48 3 MTOR mechanistic target of rapamycin (serine/threonine kinase) 3965 499 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A7035.[MT7]-IHGALLILNELVR.3y5_1.heavy 535.67 / 630.357 19165.0 42.99209976196289 48 18 10 10 10 5.3671990318726035 18.631692137027052 0.0 3 0.9888323999510344 11.667490201035303 19165.0 39.04300901100766 1.0 - - - - - - - 299.25 41 4 MTOR mechanistic target of rapamycin (serine/threonine kinase) 3967 500 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A7033.[MT7]-VLGLLGALDPYK[MT7].3b6_1.heavy 516.32 / 697.473 7411.0 44.50270080566406 48 18 10 10 10 4.888788132832245 20.454967014916747 0.0 3 0.9803742076094544 8.795001521049194 7411.0 106.56693430656935 0.0 - - - - - - - 137.0 14 3 MTOR mechanistic target of rapamycin (serine/threonine kinase) 3969 500 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A7033.[MT7]-VLGLLGALDPYK[MT7].3y3_1.heavy 516.32 / 551.331 17430.0 44.50270080566406 48 18 10 10 10 4.888788132832245 20.454967014916747 0.0 3 0.9803742076094544 8.795001521049194 17430.0 103.29476755722486 0.0 - - - - - - - 246.9 34 10 MTOR mechanistic target of rapamycin (serine/threonine kinase) 3971 500 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A7033.[MT7]-VLGLLGALDPYK[MT7].3b4_1.heavy 516.32 / 527.367 9470.0 44.50270080566406 48 18 10 10 10 4.888788132832245 20.454967014916747 0.0 3 0.9803742076094544 8.795001521049194 9470.0 51.29410208341643 0.0 - - - - - - - 240.0 18 4 MTOR mechanistic target of rapamycin (serine/threonine kinase) 3973 500 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A7033.[MT7]-VLGLLGALDPYK[MT7].3b7_1.heavy 516.32 / 768.51 4117.0 44.50270080566406 48 18 10 10 10 4.888788132832245 20.454967014916747 0.0 3 0.9803742076094544 8.795001521049194 4117.0 19.02263482389625 0.0 - - - - - - - 274.3333333333333 8 3 MTOR mechanistic target of rapamycin (serine/threonine kinase) 3975 501 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A7034.[MT7]-IHGALLILNELVR.2y8_1.heavy 803.002 / 969.609 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 3977 501 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A7034.[MT7]-IHGALLILNELVR.2y9_1.heavy 803.002 / 1082.69 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 3979 501 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A7034.[MT7]-IHGALLILNELVR.2y10_1.heavy 803.002 / 1153.73 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 3981 501 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A7034.[MT7]-IHGALLILNELVR.2y11_1.heavy 803.002 / 1210.75 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 3983 502 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2525.[MT7]-ILDVIGLPGEEDWPR.3y7_1.heavy 618.336 / 888.385 85445.0 43.157798767089844 45 15 10 10 10 3.758739264009375 26.60466528165934 0.0 3 0.9599619990155207 6.147045079341962 85445.0 302.6108895610447 0.0 - - - - - - - 311.125 170 8 CDK6 cyclin-dependent kinase 6 3985 502 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2525.[MT7]-ILDVIGLPGEEDWPR.3b6_1.heavy 618.336 / 755.478 172757.0 43.157798767089844 45 15 10 10 10 3.758739264009375 26.60466528165934 0.0 3 0.9599619990155207 6.147045079341962 172757.0 337.09525423917086 0.0 - - - - - - - 333.57142857142856 345 7 CDK6 cyclin-dependent kinase 6 3987 502 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2525.[MT7]-ILDVIGLPGEEDWPR.3b4_1.heavy 618.336 / 585.373 182251.0 43.157798767089844 45 15 10 10 10 3.758739264009375 26.60466528165934 0.0 3 0.9599619990155207 6.147045079341962 182251.0 224.2688965024982 0.0 - - - - - - - 311.3333333333333 364 6 CDK6 cyclin-dependent kinase 6 3989 502 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2525.[MT7]-ILDVIGLPGEEDWPR.3y8_1.heavy 618.336 / 985.437 183496.0 43.157798767089844 45 15 10 10 10 3.758739264009375 26.60466528165934 0.0 3 0.9599619990155207 6.147045079341962 183496.0 194.05356151438536 0.0 - - - - - - - 337.3333333333333 366 6 CDK6 cyclin-dependent kinase 6 3991 503 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2524.[MT7]-LAEGEQILSGGVFNK[MT7].3y7_1.heavy 617.347 / 852.47 27976.0 35.50699996948242 48 18 10 10 10 4.116572795824028 19.116757721116137 0.0 3 0.9809439090953311 8.925927946641654 27976.0 99.18473338415093 1.0 - - - - - - - 259.0 59 4 CDC27 cell division cycle 27 homolog (S. cerevisiae) 3993 503 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2524.[MT7]-LAEGEQILSGGVFNK[MT7].3y3_1.heavy 617.347 / 552.326 39633.0 35.50699996948242 48 18 10 10 10 4.116572795824028 19.116757721116137 0.0 3 0.9809439090953311 8.925927946641654 39633.0 82.19530060672918 0.0 - - - - - - - 629.0 79 7 CDC27 cell division cycle 27 homolog (S. cerevisiae) 3995 503 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2524.[MT7]-LAEGEQILSGGVFNK[MT7].3b6_1.heavy 617.347 / 772.396 61910.0 35.50699996948242 48 18 10 10 10 4.116572795824028 19.116757721116137 0.0 3 0.9809439090953311 8.925927946641654 61910.0 70.91364221364222 0.0 - - - - - - - 259.0 123 4 CDC27 cell division cycle 27 homolog (S. cerevisiae) 3997 503 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2524.[MT7]-LAEGEQILSGGVFNK[MT7].3b5_1.heavy 617.347 / 644.337 23831.0 35.50699996948242 48 18 10 10 10 4.116572795824028 19.116757721116137 0.0 3 0.9809439090953311 8.925927946641654 23831.0 39.56498069498069 0.0 - - - - - - - 259.0 47 3 CDC27 cell division cycle 27 homolog (S. cerevisiae) 3999 504 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2428.[MT7]-AALQALGVAEGGER.3y6_1.heavy 495.943 / 618.284 76667.0 30.173099517822266 43 13 10 10 10 1.8421385385441498 37.72916412817433 0.0 3 0.9092202536455829 4.064680082803977 76667.0 225.1733928035982 0.0 - - - - - - - 333.0 153 2 PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) 4001 504 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2428.[MT7]-AALQALGVAEGGER.3b4_1.heavy 495.943 / 528.326 45333.0 30.173099517822266 43 13 10 10 10 1.8421385385441498 37.72916412817433 0.0 3 0.9092202536455829 4.064680082803977 45333.0 154.25472162162163 0.0 - - - - - - - 333.0 90 6 PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) 4003 504 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2428.[MT7]-AALQALGVAEGGER.3b5_1.heavy 495.943 / 599.363 72333.0 30.173099517822266 43 13 10 10 10 1.8421385385441498 37.72916412817433 0.0 3 0.9092202536455829 4.064680082803977 72333.0 77.993394269546 0.0 - - - - - - - 333.0 144 2 PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) 4005 504 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2428.[MT7]-AALQALGVAEGGER.3y8_1.heavy 495.943 / 774.374 60000.0 30.173099517822266 43 13 10 10 10 1.8421385385441498 37.72916412817433 0.0 3 0.9092202536455829 4.064680082803977 60000.0 143.9568215892054 0.0 - - - - - - - 333.0 120 1 PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) 4007 505 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2521.[MT7]-LVIWGTDVNVAAC[CAM]K[MT7].3y3_1.heavy 612.009 / 522.283 39199.0 37.114749908447266 34 8 10 6 10 0.5971060257059612 88.61698143615311 0.03890228271484375 3 0.7964851079016366 2.6878652294115124 39199.0 95.12728033472804 0.0 - - - - - - - 307.2857142857143 78 7 MCM4 minichromosome maintenance complex component 4 4009 505 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2521.[MT7]-LVIWGTDVNVAAC[CAM]K[MT7].3b5_1.heavy 612.009 / 713.447 8605.0 37.114749908447266 34 8 10 6 10 0.5971060257059612 88.61698143615311 0.03890228271484375 3 0.7964851079016366 2.6878652294115124 8605.0 36.2442119944212 0.0 - - - - - - - 345.22222222222223 17 9 MCM4 minichromosome maintenance complex component 4 4011 505 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2521.[MT7]-LVIWGTDVNVAAC[CAM]K[MT7].3y4_1.heavy 612.009 / 593.32 57603.0 37.114749908447266 34 8 10 6 10 0.5971060257059612 88.61698143615311 0.03890228271484375 3 0.7964851079016366 2.6878652294115124 57603.0 78.87820464054774 0.0 - - - - - - - 438.1666666666667 115 6 MCM4 minichromosome maintenance complex component 4 4013 505 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2521.[MT7]-LVIWGTDVNVAAC[CAM]K[MT7].3b7_1.heavy 612.009 / 929.521 14341.0 37.114749908447266 34 8 10 6 10 0.5971060257059612 88.61698143615311 0.03890228271484375 3 0.7964851079016366 2.6878652294115124 14341.0 74.10516736401674 0.0 - - - - - - - 358.5 28 4 MCM4 minichromosome maintenance complex component 4 4015 506 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2520.[MT7]-GDINILLIGDPSVAK[MT7].3b6_1.heavy 605.027 / 770.453 29141.0 38.34040069580078 38 13 10 5 10 1.2033010838816047 55.403146859648416 0.04119873046875 3 0.9215002095445372 4.375677686551496 29141.0 81.26275862068965 0.0 - - - - - - - 333.5 58 6 MCM3 minichromosome maintenance complex component 3 4017 506 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2520.[MT7]-GDINILLIGDPSVAK[MT7].3b4_1.heavy 605.027 / 544.285 40930.0 38.34040069580078 38 13 10 5 10 1.2033010838816047 55.403146859648416 0.04119873046875 3 0.9215002095445372 4.375677686551496 40930.0 53.630757359430376 0.0 - - - - - - - 311.2 81 5 MCM3 minichromosome maintenance complex component 3 4019 506 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2520.[MT7]-GDINILLIGDPSVAK[MT7].3b5_1.heavy 605.027 / 657.369 45379.0 38.34040069580078 38 13 10 5 10 1.2033010838816047 55.403146859648416 0.04119873046875 3 0.9215002095445372 4.375677686551496 45379.0 48.83283140751349 0.0 - - - - - - - 445.0 90 1 MCM3 minichromosome maintenance complex component 3 4021 506 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2520.[MT7]-GDINILLIGDPSVAK[MT7].3y5_1.heavy 605.027 / 645.405 54945.0 38.34040069580078 38 13 10 5 10 1.2033010838816047 55.403146859648416 0.04119873046875 3 0.9215002095445372 4.375677686551496 54945.0 67.9551364318811 0.0 - - - - - - - 311.2 109 5 MCM3 minichromosome maintenance complex component 3 4023 507 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2420.[MT7]-LLDVIHTENK[MT7].3y3_1.heavy 490.624 / 534.3 22000.0 29.95069980621338 43 18 10 5 10 5.883285282968577 16.99730595922117 0.04979896545410156 3 0.9863431126344171 10.548507221598806 22000.0 31.792888222055517 0.0 - - - - - - - 333.0 44 1 CDK2 cyclin-dependent kinase 2 4025 507 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2420.[MT7]-LLDVIHTENK[MT7].3b4_1.heavy 490.624 / 585.373 44667.0 29.95069980621338 43 18 10 5 10 5.883285282968577 16.99730595922117 0.04979896545410156 3 0.9863431126344171 10.548507221598806 44667.0 95.7864453594658 0.0 - - - - - - - 333.0 89 3 CDK2 cyclin-dependent kinase 2 4027 507 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2420.[MT7]-LLDVIHTENK[MT7].3b5_1.heavy 490.624 / 698.457 17333.0 29.95069980621338 43 18 10 5 10 5.883285282968577 16.99730595922117 0.04979896545410156 3 0.9863431126344171 10.548507221598806 17333.0 73.35686508097302 0.0 - - - - - - - 333.0 34 6 CDK2 cyclin-dependent kinase 2 4029 507 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2420.[MT7]-LLDVIHTENK[MT7].3y4_1.heavy 490.624 / 635.348 51000.0 29.95069980621338 43 18 10 5 10 5.883285282968577 16.99730595922117 0.04979896545410156 3 0.9863431126344171 10.548507221598806 51000.0 130.1572072072072 0.0 - - - - - - - 333.0 102 6 CDK2 cyclin-dependent kinase 2 4031 508 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2424.[MT7]-TVILEILMEK[MT7].3y3_1.heavy 492.97 / 551.298 35020.0 45.731300354003906 44 14 10 10 10 2.2077523036252447 35.3500364317919 0.0 3 0.9452760572016785 5.25137435384588 35020.0 194.57027720360253 0.0 - - - - - - - 225.66666666666666 70 12 ATM;LOC651610 ataxia telangiectasia mutated;serine-protein kinase ATM-like 4033 508 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2424.[MT7]-TVILEILMEK[MT7].3b4_1.heavy 492.97 / 571.394 12195.0 45.731300354003906 44 14 10 10 10 2.2077523036252447 35.3500364317919 0.0 3 0.9452760572016785 5.25137435384588 12195.0 175.303125 0.0 - - - - - - - 260.375 24 8 ATM;LOC651610 ataxia telangiectasia mutated;serine-protein kinase ATM-like 4035 508 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2424.[MT7]-TVILEILMEK[MT7].3b5_1.heavy 492.97 / 700.436 24702.0 45.731300354003906 44 14 10 10 10 2.2077523036252447 35.3500364317919 0.0 3 0.9452760572016785 5.25137435384588 24702.0 267.973751317176 0.0 - - - - - - - 138.66666666666666 49 6 ATM;LOC651610 ataxia telangiectasia mutated;serine-protein kinase ATM-like 4037 508 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2424.[MT7]-TVILEILMEK[MT7].3y4_1.heavy 492.97 / 664.382 11778.0 45.731300354003906 44 14 10 10 10 2.2077523036252447 35.3500364317919 0.0 3 0.9452760572016785 5.25137435384588 11778.0 60.69882777484084 0.0 - - - - - - - 208.3 23 10 ATM;LOC651610 ataxia telangiectasia mutated;serine-protein kinase ATM-like 4039 509 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2533.[MT7]-QAEFFLSQQASLLK[MT7].3b6_1.heavy 633.359 / 880.469 17234.0 37.87874984741211 40 15 10 5 10 1.3305087686766512 43.48455564930717 0.041900634765625 3 0.9516030977149955 5.587098054409381 17234.0 35.012843833851086 0.0 - - - - - - - 345.0 34 6 ANAPC5 anaphase promoting complex subunit 5 4041 509 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2533.[MT7]-QAEFFLSQQASLLK[MT7].3b4_1.heavy 633.359 / 620.316 36535.0 37.87874984741211 40 15 10 5 10 1.3305087686766512 43.48455564930717 0.041900634765625 3 0.9516030977149955 5.587098054409381 36535.0 28.854143185054056 0.0 - - - - - - - 345.0 73 6 ANAPC5 anaphase promoting complex subunit 5 4043 509 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2533.[MT7]-QAEFFLSQQASLLK[MT7].3b5_1.heavy 633.359 / 767.385 37684.0 37.87874984741211 40 15 10 5 10 1.3305087686766512 43.48455564930717 0.041900634765625 3 0.9516030977149955 5.587098054409381 37684.0 30.062727008027295 0.0 - - - - - - - 292.72727272727275 75 11 ANAPC5 anaphase promoting complex subunit 5 4045 509 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2533.[MT7]-QAEFFLSQQASLLK[MT7].3y4_1.heavy 633.359 / 604.415 39063.0 37.87874984741211 40 15 10 5 10 1.3305087686766512 43.48455564930717 0.041900634765625 3 0.9516030977149955 5.587098054409381 39063.0 49.22690732565667 0.0 - - - - - - - 368.0 78 5 ANAPC5 anaphase promoting complex subunit 5 4047 510 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2431.[MT7]-IAVMELFRPK[MT7].3y7_1.heavy 497.97 / 1064.6 N/A 37.73379898071289 38 8 10 10 10 0.8562203882764969 79.90899300580082 0.0 3 0.7663701947067052 2.5018166379706246 0.0 0.0 2.0 - - - - - - - 0.0 0 0 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 4049 510 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2431.[MT7]-IAVMELFRPK[MT7].3y6_1.heavy 497.97 / 933.564 6355.0 37.73379898071289 38 8 10 10 10 0.8562203882764969 79.90899300580082 0.0 3 0.7663701947067052 2.5018166379706246 6355.0 54.08510638297872 0.0 - - - - - - - 235.0 12 3 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 4051 510 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2431.[MT7]-IAVMELFRPK[MT7].3b5_1.heavy 497.97 / 688.382 12945.0 37.73379898071289 38 8 10 10 10 0.8562203882764969 79.90899300580082 0.0 3 0.7663701947067052 2.5018166379706246 12945.0 77.06418078330395 0.0 - - - - - - - 294.0 25 4 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 4053 510 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2431.[MT7]-IAVMELFRPK[MT7].3y9_2.heavy 497.97 / 617.859 37895.0 37.73379898071289 38 8 10 10 10 0.8562203882764969 79.90899300580082 0.0 3 0.7663701947067052 2.5018166379706246 37895.0 181.90613839729568 0.0 - - - - - - - 294.0 75 4 LOC100290337;DDB1 DNA damage-binding protein 1-like;damage-specific DNA binding protein 1, 127kDa 4055 511 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2437.[MT7]-YAALNLAALHC[CAM]R.3y6_1.heavy 506.277 / 727.367 31378.0 31.340099334716797 50 20 10 10 10 6.596069642239779 15.160543387780809 0.0 3 0.9902628587304464 12.496649946310114 31378.0 172.7229357798165 0.0 - - - - - - - 327.0 62 4 ANAPC5 anaphase promoting complex subunit 5 4057 511 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2437.[MT7]-YAALNLAALHC[CAM]R.3b4_1.heavy 506.277 / 563.331 24514.0 31.340099334716797 50 20 10 10 10 6.596069642239779 15.160543387780809 0.0 3 0.9902628587304464 12.496649946310114 24514.0 33.30078374390669 0.0 - - - - - - - 327.0 49 3 ANAPC5 anaphase promoting complex subunit 5 4059 511 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2437.[MT7]-YAALNLAALHC[CAM]R.3b5_1.heavy 506.277 / 677.374 45106.0 31.340099334716797 50 20 10 10 10 6.596069642239779 15.160543387780809 0.0 3 0.9902628587304464 12.496649946310114 45106.0 37.697005528263404 0.0 - - - - - - - 327.0 90 3 ANAPC5 anaphase promoting complex subunit 5 4061 511 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2437.[MT7]-YAALNLAALHC[CAM]R.3y5_1.heavy 506.277 / 656.33 33012.0 31.340099334716797 50 20 10 10 10 6.596069642239779 15.160543387780809 0.0 3 0.9902628587304464 12.496649946310114 33012.0 117.61155963302753 0.0 - - - - - - - 327.0 66 2 ANAPC5 anaphase promoting complex subunit 5 4063 512 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2436.[MT7]-FFTGSLAEVEK[MT7].3y3_1.heavy 505.948 / 519.326 44461.0 34.43560028076172 43 13 10 10 10 1.2399119481454568 48.09569575109564 0.0 3 0.9144814935804154 4.189745049895416 44461.0 30.991222088111044 0.0 - - - - - - - 276.0 88 5 TRIM32 tripartite motif-containing 32 4065 512 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2436.[MT7]-FFTGSLAEVEK[MT7].3b4_1.heavy 505.948 / 597.315 14360.0 34.43560028076172 43 13 10 10 10 1.2399119481454568 48.09569575109564 0.0 3 0.9144814935804154 4.189745049895416 14360.0 58.785690864974754 0.0 - - - - - - - 276.0 28 5 TRIM32 tripartite motif-containing 32 4067 512 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2436.[MT7]-FFTGSLAEVEK[MT7].3b5_1.heavy 505.948 / 684.347 31758.0 34.43560028076172 43 13 10 10 10 1.2399119481454568 48.09569575109564 0.0 3 0.9144814935804154 4.189745049895416 31758.0 143.83152173913044 0.0 - - - - - - - 276.0 63 3 TRIM32 tripartite motif-containing 32 4069 512 20120510_pMRM_Cell_cycle_and_ub_set01_01 20120510_pMRM_Cell_cycle_and_ub_set01_01 A2436.[MT7]-FFTGSLAEVEK[MT7].3y4_1.heavy 505.948 / 648.369 36452.0 34.43560028076172 43 13 10 10 10 1.2399119481454568 48.09569575109564 0.0 3 0.9144814935804154 4.189745049895416 36452.0 38.607255093949476 0.0 - - - - - - - 276.0 72 4 TRIM32 tripartite motif-containing 32