Index Sample Index Original Filename Sample Name Sample ID Sample Comment Sample Type Acquisition Date & Time Rack Number Plate Number Vial Number Dilution Factor Injection Volume Operator Name Acq. Method Name IS Component Name Component Index Component Comment IS Comment Mass Info IS Mass Info IS Name Component Group Name Conc. Units Failed Query IS Failed Query Peak Comment IS Peak Comment Actual Concentration IS Actual Concentration Concentration Ratio Expected RT IS Expected RT Integration Type IS Integration Type Area IS Area Corrected Area IS Corrected Area Area Ratio Height IS Height Corrected Height IS Corrected Height Height Ratio Area / Height IS Area / Height Corrected Area/Height IS Corrected Area/Height Region Height IS Region Height Quality IS Quality Retention Time IS Retention Time Start Time IS Start Time End Time IS End Time Total Width IS Total Width Width at 50% IS Width at 50% Signal / Noise IS Signal / Noise Baseline Delta / Height IS Baseline Delta / Height Modified Relative RT Used Calculated Concentration Accuracy SF Peak Width Confidence SF Model Source SF Candidate Model Quality SF Asymmetry SF Saturated SF Integration Quality SF Group Confidence SF Num Peaks Score_IMPAQT MSSimScore_IMPAQT HeightScore_IMPAQT RTminScore_IMPAQT RankScore_IMPAQT MSSim_IMPAQT MSSimSita_IMPAQT RTminDiff_IMPAQT RankSum_IMPAQT CosSimilarity_IMPAQT CosSimilaritySita_IMPAQT Height_IMPAQT InterfereTrans_IMPAQT InterfereTransAll_IMPAQT LScore_IMPAQT LRTminScore_IMPAQT LSNScore_IMPAQT LSNAllScore_IMPAQT HLSimScore_IMPAQT HLSim_IMPAQT HLSimSita_IMPAQT BaseLine_IMPAQT BaseLineUnitNum_IMPAQT BaseLineMaxCount_IMPAQT Symbol Description 1 1 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9866.[MT7]-SDEETLK[MT7].2y5_1.heavy 555.3 / 763.432 2486.0 18.367000579833984 42 18 8 10 6 4.457659895582281 22.433295123996338 0.0 5 0.985331354941155 10.177358205513091 2486.0 10.210300454238649 0.0 - - - - - - - 272.85714285714283 4 7 RFC1 replication factor C (activator 1) 1, 145kDa 3 1 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9866.[MT7]-SDEETLK[MT7].2b4_1.heavy 555.3 / 605.253 2677.0 18.367000579833984 42 18 8 10 6 4.457659895582281 22.433295123996338 0.0 5 0.985331354941155 10.177358205513091 2677.0 7.717752095414739 0.0 - - - - - - - 233.44444444444446 5 9 RFC1 replication factor C (activator 1) 1, 145kDa 5 1 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9866.[MT7]-SDEETLK[MT7].2y3_1.heavy 555.3 / 505.347 2677.0 18.367000579833984 42 18 8 10 6 4.457659895582281 22.433295123996338 0.0 5 0.985331354941155 10.177358205513091 2677.0 2.429170042853176 7.0 - - - - - - - 819.5714285714286 8 7 RFC1 replication factor C (activator 1) 1, 145kDa 7 1 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9866.[MT7]-SDEETLK[MT7].2b5_1.heavy 555.3 / 706.301 2486.0 18.367000579833984 42 18 8 10 6 4.457659895582281 22.433295123996338 0.0 5 0.985331354941155 10.177358205513091 2486.0 9.334813879478492 0.0 - - - - - - - 267.4 4 5 RFC1 replication factor C (activator 1) 1, 145kDa 9 2 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9867.[MT7]-EIEPVASK[MT7].2y4_1.heavy 580.842 / 548.352 1876.0 21.14975070953369 36 14 9 5 8 2.523512813104994 29.865578213021315 0.04590034484863281 4 0.9422618638313911 5.111153202012969 1876.0 1.0666666666666664 20.0 - - - - - - - 375.0 6 5 RFC1 replication factor C (activator 1) 1, 145kDa 11 2 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9867.[MT7]-EIEPVASK[MT7].2b3_1.heavy 580.842 / 516.279 11723.0 21.14975070953369 36 14 9 5 8 2.523512813104994 29.865578213021315 0.04590034484863281 4 0.9422618638313911 5.111153202012969 11723.0 25.808097014925373 2.0 - - - - - - - 292.75 26 4 RFC1 replication factor C (activator 1) 1, 145kDa 13 2 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9867.[MT7]-EIEPVASK[MT7].2y5_1.heavy 580.842 / 645.405 10551.0 21.14975070953369 36 14 9 5 8 2.523512813104994 29.865578213021315 0.04590034484863281 4 0.9422618638313911 5.111153202012969 10551.0 28.383464818763326 1.0 - - - - - - - 328.0 21 5 RFC1 replication factor C (activator 1) 1, 145kDa 15 2 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9867.[MT7]-EIEPVASK[MT7].2y7_1.heavy 580.842 / 887.532 3751.0 21.14975070953369 36 14 9 5 8 2.523512813104994 29.865578213021315 0.04590034484863281 4 0.9422618638313911 5.111153202012969 3751.0 11.157025586353942 1.0 - - - - - - - 334.7142857142857 7 7 RFC1 replication factor C (activator 1) 1, 145kDa 17 3 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9868.[MT7]-FFGVIPSGK[MT7].2y4_1.heavy 620.371 / 532.321 36587.0 34.142799377441406 48 18 10 10 10 5.04109451731431 19.836961924942432 0.0 3 0.9874761956944905 11.016406111474039 36587.0 77.89164117046207 0.0 - - - - - - - 717.75 73 8 RFC1 replication factor C (activator 1) 1, 145kDa 19 3 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9868.[MT7]-FFGVIPSGK[MT7].2y8_1.heavy 620.371 / 948.563 6142.0 34.142799377441406 48 18 10 10 10 5.04109451731431 19.836961924942432 0.0 3 0.9874761956944905 11.016406111474039 6142.0 11.806128969803787 0.0 - - - - - - - 744.0 12 7 RFC1 replication factor C (activator 1) 1, 145kDa 21 3 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9868.[MT7]-FFGVIPSGK[MT7].2y5_1.heavy 620.371 / 645.405 13086.0 34.142799377441406 48 18 10 10 10 5.04109451731431 19.836961924942432 0.0 3 0.9874761956944905 11.016406111474039 13086.0 32.00433707865169 0.0 - - - - - - - 705.8571428571429 26 7 RFC1 replication factor C (activator 1) 1, 145kDa 23 3 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9868.[MT7]-FFGVIPSGK[MT7].2b4_1.heavy 620.371 / 595.336 14688.0 34.142799377441406 48 18 10 10 10 5.04109451731431 19.836961924942432 0.0 3 0.9874761956944905 11.016406111474039 14688.0 55.539226186031925 0.0 - - - - - - - 717.875 29 8 RFC1 replication factor C (activator 1) 1, 145kDa 25 4 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9869.[MT7]-TAQVSDERK[MT7].3b6_1.heavy 441.249 / 746.38 3593.0 14.77584981918335 33 17 0 6 10 3.112628270089498 32.12719005380128 0.03209972381591797 3 0.9710627669175816 7.237373642858558 3593.0 45.41660904570211 0.0 - - - - - - - 205.28571428571428 7 7 RFC1 replication factor C (activator 1) 1, 145kDa 27 4 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9869.[MT7]-TAQVSDERK[MT7].3y3_1.heavy 441.249 / 576.359 924.0 14.77584981918335 33 17 0 6 10 3.112628270089498 32.12719005380128 0.03209972381591797 3 0.9710627669175816 7.237373642858558 924.0 8.522330097087378 11.0 - - - - - - - 158.15384615384616 42 13 RFC1 replication factor C (activator 1) 1, 145kDa 29 4 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9869.[MT7]-TAQVSDERK[MT7].3y5_1.heavy 441.249 / 778.417 1232.0 14.77584981918335 33 17 0 6 10 3.112628270089498 32.12719005380128 0.03209972381591797 3 0.9710627669175816 7.237373642858558 1232.0 16.170911674165286 0.0 - - - - - - - 164.2 2 5 RFC1 replication factor C (activator 1) 1, 145kDa 31 4 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9869.[MT7]-TAQVSDERK[MT7].3b3_1.heavy 441.249 / 445.253 4003.0 14.77584981918335 33 17 0 6 10 3.112628270089498 32.12719005380128 0.03209972381591797 3 0.9710627669175816 7.237373642858558 4003.0 6.012383536074156 0.0 - - - - - - - 641.375 8 8 RFC1 replication factor C (activator 1) 1, 145kDa 33 5 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7099.[MT7]-DRDRDVIFLSSLSAQFK[MT7].4y4_1.heavy 572.068 / 637.379 6687.0 36.59859848022461 44 14 10 10 10 6.261864774794298 15.969683727845272 0.0 3 0.9440916176318643 5.194927004414764 6687.0 33.41464736645743 0.0 - - - - - - - 221.05882352941177 13 17 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 35 5 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7099.[MT7]-DRDRDVIFLSSLSAQFK[MT7].4y5_1.heavy 572.068 / 724.411 8359.0 36.59859848022461 44 14 10 10 10 6.261864774794298 15.969683727845272 0.0 3 0.9440916176318643 5.194927004414764 8359.0 43.36861366311509 0.0 - - - - - - - 231.14285714285714 16 14 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 37 5 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7099.[MT7]-DRDRDVIFLSSLSAQFK[MT7].4b8_2.heavy 572.068 / 581.31 3761.0 36.59859848022461 44 14 10 10 10 6.261864774794298 15.969683727845272 0.0 3 0.9440916176318643 5.194927004414764 3761.0 6.48448275862069 0.0 - - - - - - - 241.3125 7 16 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 39 5 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7099.[MT7]-DRDRDVIFLSSLSAQFK[MT7].4b10_2.heavy 572.068 / 681.368 4284.0 36.59859848022461 44 14 10 10 10 6.261864774794298 15.969683727845272 0.0 3 0.9440916176318643 5.194927004414764 4284.0 10.761244019138756 0.0 - - - - - - - 178.85714285714286 8 14 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 41 6 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7098.[MT7]-SQC[CAM]ISHTALVLQGSLTQPR.3y7_1.heavy 747.403 / 758.416 2620.0 30.716500282287598 46 20 10 6 10 7.682898032954953 13.015921800739891 0.039600372314453125 3 0.9916137150370147 13.467084480799937 2620.0 7.7494789081885855 0.0 - - - - - - - 262.3 5 10 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 43 6 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7098.[MT7]-SQC[CAM]ISHTALVLQGSLTQPR.3y8_1.heavy 747.403 / 886.474 1814.0 30.716500282287598 46 20 10 6 10 7.682898032954953 13.015921800739891 0.039600372314453125 3 0.9916137150370147 13.467084480799937 1814.0 10.933914748298651 0.0 - - - - - - - 269.0 3 9 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 45 6 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7098.[MT7]-SQC[CAM]ISHTALVLQGSLTQPR.3b5_1.heavy 747.403 / 720.347 1209.0 30.716500282287598 46 20 10 6 10 7.682898032954953 13.015921800739891 0.039600372314453125 3 0.9916137150370147 13.467084480799937 1209.0 2.518155253837072 8.0 - - - - - - - 269.0 2 9 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 47 6 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7098.[MT7]-SQC[CAM]ISHTALVLQGSLTQPR.3y9_1.heavy 747.403 / 999.558 2822.0 30.716500282287598 46 20 10 6 10 7.682898032954953 13.015921800739891 0.039600372314453125 3 0.9916137150370147 13.467084480799937 2822.0 7.467770235629474 0.0 - - - - - - - 327.625 5 8 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 49 7 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7097.[MT7]-DENPFASLTATSQPIAAAAR.3y7_1.heavy 725.71 / 669.404 23284.0 36.086626052856445 36 13 10 3 10 1.930797090938412 39.880361311349425 0.07070159912109375 3 0.9203788517892929 4.344337482343784 23284.0 38.520816034113004 0.0 - - - - - - - 770.5833333333334 46 12 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 51 7 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7097.[MT7]-DENPFASLTATSQPIAAAAR.3b6_1.heavy 725.71 / 818.38 6637.0 36.086626052856445 36 13 10 3 10 1.930797090938412 39.880361311349425 0.07070159912109375 3 0.9203788517892929 4.344337482343784 6637.0 27.879216123789213 0.0 - - - - - - - 233.21428571428572 13 14 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 53 7 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7097.[MT7]-DENPFASLTATSQPIAAAAR.3b5_1.heavy 725.71 / 747.343 4570.0 36.086626052856445 36 13 10 3 10 1.930797090938412 39.880361311349425 0.07070159912109375 3 0.9203788517892929 4.344337482343784 4570.0 13.959873668885681 0.0 - - - - - - - 256.5 9 14 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 55 7 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7097.[MT7]-DENPFASLTATSQPIAAAAR.3b3_1.heavy 725.71 / 503.222 13165.0 36.086626052856445 36 13 10 3 10 1.930797090938412 39.880361311349425 0.07070159912109375 3 0.9203788517892929 4.344337482343784 13165.0 48.10551389695657 0.0 - - - - - - - 286.8181818181818 26 11 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 57 8 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9874.[MT7]-QLQLDEDAELER.2b3_1.heavy 801.908 / 514.311 2575.0 28.50909996032715 48 18 10 10 10 5.144432988389882 19.43848821156445 0.0 3 0.9844640976787397 9.88849634454959 2575.0 7.042735042735043 0.0 - - - - - - - 304.2 5 10 RFC1 replication factor C (activator 1) 1, 145kDa 59 8 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9874.[MT7]-QLQLDEDAELER.2y5_1.heavy 801.908 / 617.325 3979.0 28.50909996032715 48 18 10 10 10 5.144432988389882 19.43848821156445 0.0 3 0.9844640976787397 9.88849634454959 3979.0 9.691755000205347 0.0 - - - - - - - 351.0 7 4 RFC1 replication factor C (activator 1) 1, 145kDa 61 8 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9874.[MT7]-QLQLDEDAELER.2y9_1.heavy 801.908 / 1089.51 2809.0 28.50909996032715 48 18 10 10 10 5.144432988389882 19.43848821156445 0.0 3 0.9844640976787397 9.88849634454959 2809.0 14.76525641025641 0.0 - - - - - - - 334.2857142857143 5 7 RFC1 replication factor C (activator 1) 1, 145kDa 63 8 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9874.[MT7]-QLQLDEDAELER.2y7_1.heavy 801.908 / 861.395 2575.0 28.50909996032715 48 18 10 10 10 5.144432988389882 19.43848821156445 0.0 3 0.9844640976787397 9.88849634454959 2575.0 6.602564102564102 0.0 - - - - - - - 267.42857142857144 5 7 RFC1 replication factor C (activator 1) 1, 145kDa 65 9 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7092.[MT7]-DVIFLSSLSAQFK[MT7].3b4_1.heavy 581.669 / 619.357 9099.0 41.52505016326904 43 16 10 7 10 3.6793223007148548 27.178918242789177 0.029399871826171875 3 0.9676232723728728 6.840173585552886 9099.0 17.84022753955024 0.0 - - - - - - - 734.8888888888889 18 9 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 67 9 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7092.[MT7]-DVIFLSSLSAQFK[MT7].3b5_1.heavy 581.669 / 732.441 3107.0 41.52505016326904 43 16 10 7 10 3.6793223007148548 27.178918242789177 0.029399871826171875 3 0.9676232723728728 6.840173585552886 3107.0 15.287423020289022 0.0 - - - - - - - 754.5 6 8 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 69 9 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7092.[MT7]-DVIFLSSLSAQFK[MT7].3y4_1.heavy 581.669 / 637.379 3684.0 41.52505016326904 43 16 10 7 10 3.6793223007148548 27.178918242789177 0.029399871826171875 3 0.9676232723728728 6.840173585552886 3684.0 25.621804511278196 0.0 - - - - - - - 162.79166666666666 7 24 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 71 9 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7092.[MT7]-DVIFLSSLSAQFK[MT7].3y5_1.heavy 581.669 / 724.411 7235.0 41.52505016326904 43 16 10 7 10 3.6793223007148548 27.178918242789177 0.029399871826171875 3 0.9676232723728728 6.840173585552886 7235.0 69.08609022556391 0.0 - - - - - - - 200.8695652173913 14 23 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 73 10 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9873.[MT7]-QLHEDEEFAR.3y7_1.heavy 473.232 / 895.379 2120.0 21.3533992767334 41 11 10 10 10 1.0537560048532193 55.852733539656 0.0 3 0.8724724984419672 3.41848126274343 2120.0 8.893220338983049 0.0 - - - - - - - 353.5 4 2 RFC1 replication factor C (activator 1) 1, 145kDa 75 10 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9873.[MT7]-QLHEDEEFAR.3y6_1.heavy 473.232 / 766.337 6126.0 21.3533992767334 41 11 10 10 10 1.0537560048532193 55.852733539656 0.0 3 0.8724724984419672 3.41848126274343 6126.0 23.367375580265573 0.0 - - - - - - - 353.5 12 10 RFC1 replication factor C (activator 1) 1, 145kDa 77 10 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9873.[MT7]-QLHEDEEFAR.3y4_1.heavy 473.232 / 522.267 7775.0 21.3533992767334 41 11 10 10 10 1.0537560048532193 55.852733539656 0.0 3 0.8724724984419672 3.41848126274343 7775.0 18.075636942675157 1.0 - - - - - - - 324.125 15 8 RFC1 replication factor C (activator 1) 1, 145kDa 79 10 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9873.[MT7]-QLHEDEEFAR.3y5_1.heavy 473.232 / 651.31 9660.0 21.3533992767334 41 11 10 10 10 1.0537560048532193 55.852733539656 0.0 3 0.8724724984419672 3.41848126274343 9660.0 49.13863219259419 1.0 - - - - - - - 314.3333333333333 19 9 RFC1 replication factor C (activator 1) 1, 145kDa 81 11 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7091.[MT7]-LETVDPTYIFHPR.3y6_1.heavy 577.978 / 832.446 1680.0 34.90370178222656 45 15 10 10 10 3.786587137143758 26.409005359752665 0.0 3 0.9566783295759795 5.907847903022585 1680.0 1.2994475138121546 0.0 - - - - - - - 215.11111111111111 3 9 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 83 11 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7091.[MT7]-LETVDPTYIFHPR.3y5_1.heavy 577.978 / 669.383 2973.0 34.90370178222656 45 15 10 10 10 3.786587137143758 26.409005359752665 0.0 3 0.9566783295759795 5.907847903022585 2973.0 7.355876288659794 1.0 - - - - - - - 193.64285714285714 5 14 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 85 11 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7091.[MT7]-LETVDPTYIFHPR.3b5_1.heavy 577.978 / 702.379 5041.0 34.90370178222656 45 15 10 10 10 3.786587137143758 26.409005359752665 0.0 3 0.9566783295759795 5.907847903022585 5041.0 16.422772664395087 0.0 - - - - - - - 243.88888888888889 10 9 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 87 11 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7091.[MT7]-LETVDPTYIFHPR.3y4_1.heavy 577.978 / 556.299 3490.0 34.90370178222656 45 15 10 10 10 3.786587137143758 26.409005359752665 0.0 3 0.9566783295759795 5.907847903022585 3490.0 3.172727272727273 1.0 - - - - - - - 1107.7142857142858 6 7 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 89 12 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9876.[MT7]-DTEAGETFSSVQANLSK[MT7].3b6_1.heavy 691.351 / 747.328 4319.0 29.70840072631836 42 14 10 10 8 1.7377670995053174 38.58803675593555 0.0 4 0.9396169101787809 4.996832180398628 4319.0 8.53135802469136 0.0 - - - - - - - 709.7142857142857 8 7 RFC1 replication factor C (activator 1) 1, 145kDa 91 12 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9876.[MT7]-DTEAGETFSSVQANLSK[MT7].3b4_1.heavy 691.351 / 561.264 2591.0 29.70840072631836 42 14 10 10 8 1.7377670995053174 38.58803675593555 0.0 4 0.9396169101787809 4.996832180398628 2591.0 2.7989197530864196 5.0 - - - - - - - 729.0 7 8 RFC1 replication factor C (activator 1) 1, 145kDa 93 12 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9876.[MT7]-DTEAGETFSSVQANLSK[MT7].3y5_1.heavy 691.351 / 676.411 4535.0 29.70840072631836 42 14 10 10 8 1.7377670995053174 38.58803675593555 0.0 4 0.9396169101787809 4.996832180398628 4535.0 7.978240740740741 1.0 - - - - - - - 324.0 9 10 RFC1 replication factor C (activator 1) 1, 145kDa 95 12 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9876.[MT7]-DTEAGETFSSVQANLSK[MT7].3b7_1.heavy 691.351 / 848.375 2375.0 29.70840072631836 42 14 10 10 8 1.7377670995053174 38.58803675593555 0.0 4 0.9396169101787809 4.996832180398628 2375.0 4.947916666666667 3.0 - - - - - - - 270.0 6 8 RFC1 replication factor C (activator 1) 1, 145kDa 97 13 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7090.[MT7]-YFSGPAITLENTR.2b4_1.heavy 806.926 / 599.295 2814.0 33.492801666259766 47 17 10 10 10 5.080503153477071 19.683089839548764 0.0 3 0.9770631944530225 8.133215502832217 2814.0 4.859999999999999 0.0 - - - - - - - 234.375 5 16 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 99 13 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7090.[MT7]-YFSGPAITLENTR.2y9_1.heavy 806.926 / 1014.56 4377.0 33.492801666259766 47 17 10 10 10 5.080503153477071 19.683089839548764 0.0 3 0.9770631944530225 8.133215502832217 4377.0 16.985373134328363 0.0 - - - - - - - 256.7857142857143 8 14 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 101 13 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7090.[MT7]-YFSGPAITLENTR.2y10_1.heavy 806.926 / 1071.58 3283.0 33.492801666259766 47 17 10 10 10 5.080503153477071 19.683089839548764 0.0 3 0.9770631944530225 8.133215502832217 3283.0 30.166781559760793 0.0 - - - - - - - 260.5 6 12 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 103 13 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7090.[MT7]-YFSGPAITLENTR.2y11_1.heavy 806.926 / 1158.61 3596.0 33.492801666259766 47 17 10 10 10 5.080503153477071 19.683089839548764 0.0 3 0.9770631944530225 8.133215502832217 3596.0 20.709330711886622 0.0 - - - - - - - 260.5 7 6 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 105 14 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9875.[MT7]-LTPTSVLDYFGTGSVQR.3y7_1.heavy 662.354 / 704.369 16705.0 41.13667392730713 33 20 2 3 8 10.737289784015566 9.31333716529365 0.058300018310546875 4 0.9973558116503916 23.994982265054457 16705.0 67.22503604193972 0.0 - - - - - - - 308.06666666666666 33 15 RFC1 replication factor C (activator 1) 1, 145kDa 107 14 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9875.[MT7]-LTPTSVLDYFGTGSVQR.3b5_1.heavy 662.354 / 644.374 5646.0 41.13667392730713 33 20 2 3 8 10.737289784015566 9.31333716529365 0.058300018310546875 4 0.9973558116503916 23.994982265054457 5646.0 6.043660029598119 3.0 - - - - - - - 740.0 18 14 RFC1 replication factor C (activator 1) 1, 145kDa 109 14 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9875.[MT7]-LTPTSVLDYFGTGSVQR.3y8_1.heavy 662.354 / 851.437 7513.0 41.13667392730713 33 20 2 3 8 10.737289784015566 9.31333716529365 0.058300018310546875 4 0.9973558116503916 23.994982265054457 7513.0 33.24941309842972 1.0 - - - - - - - 641.625 73 8 RFC1 replication factor C (activator 1) 1, 145kDa 111 14 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9875.[MT7]-LTPTSVLDYFGTGSVQR.3b8_1.heavy 662.354 / 971.553 8259.0 41.13667392730713 33 20 2 3 8 10.737289784015566 9.31333716529365 0.058300018310546875 4 0.9973558116503916 23.994982265054457 8259.0 66.89789999999999 0.0 - - - - - - - 238.05 16 20 RFC1 replication factor C (activator 1) 1, 145kDa 113 15 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7096.[MT7]-LAGGQTSQPTTPLTSPQR.3y7_1.heavy 662.024 / 798.447 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 115 15 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7096.[MT7]-LAGGQTSQPTTPLTSPQR.3b5_1.heavy 662.024 / 571.332 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 117 15 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7096.[MT7]-LAGGQTSQPTTPLTSPQR.3y5_1.heavy 662.024 / 588.31 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 119 15 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7096.[MT7]-LAGGQTSQPTTPLTSPQR.3y10_1.heavy 662.024 / 1097.59 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 121 16 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9870.[MT7]-NK[MT7]PLSPIK[MT7].3b2_1.heavy 443.626 / 531.349 1632.0 21.004050254821777 32 17 8 5 2 17.325829001795434 5.771729594562964 0.043399810791015625 15 0.9755541820517769 7.877190845068261 1632.0 3.7105480038088405 21.0 - - - - - - - 372.8 8 10 RFC1 replication factor C (activator 1) 1, 145kDa 123 16 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9870.[MT7]-NK[MT7]PLSPIK[MT7].3y3_1.heavy 443.626 / 501.352 13523.0 21.004050254821777 32 17 8 5 2 17.325829001795434 5.771729594562964 0.043399810791015625 15 0.9755541820517769 7.877190845068261 13523.0 15.46590421729807 0.0 - - - - - - - 399.42857142857144 27 7 RFC1 replication factor C (activator 1) 1, 145kDa 125 16 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9870.[MT7]-NK[MT7]PLSPIK[MT7].3y6_1.heavy 443.626 / 798.521 1399.0 21.004050254821777 32 17 8 5 2 17.325829001795434 5.771729594562964 0.043399810791015625 15 0.9755541820517769 7.877190845068261 1399.0 11.348111587982833 1.0 - - - - - - - 233.0 6 5 RFC1 replication factor C (activator 1) 1, 145kDa 127 16 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9870.[MT7]-NK[MT7]PLSPIK[MT7].3y4_1.heavy 443.626 / 588.384 7927.0 21.004050254821777 32 17 8 5 2 17.325829001795434 5.771729594562964 0.043399810791015625 15 0.9755541820517769 7.877190845068261 7927.0 27.177339515897494 2.0 - - - - - - - 233.0 34 5 RFC1 replication factor C (activator 1) 1, 145kDa 129 17 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7095.[MT7]-QVQK[MT7]PFLRPELGPR.4y5_1.heavy 489.046 / 571.32 2057.0 26.239700317382812 47 17 10 10 10 4.044480224356621 24.725055990577275 0.0 3 0.9764030322918547 8.018193804335777 2057.0 11.325505836575875 0.0 - - - - - - - 257.0 4 6 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 131 17 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7095.[MT7]-QVQK[MT7]PFLRPELGPR.4y10_2.heavy 489.046 / 591.343 4113.0 26.239700317382812 47 17 10 10 10 4.044480224356621 24.725055990577275 0.0 3 0.9764030322918547 8.018193804335777 4113.0 9.202237354085602 0.0 - - - - - - - 257.0 8 4 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 133 17 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7095.[MT7]-QVQK[MT7]PFLRPELGPR.4y6_1.heavy 489.046 / 668.373 4884.0 26.239700317382812 47 17 10 10 10 4.044480224356621 24.725055990577275 0.0 3 0.9764030322918547 8.018193804335777 4884.0 17.388560311284046 0.0 - - - - - - - 257.0 9 6 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 135 17 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7095.[MT7]-QVQK[MT7]PFLRPELGPR.4b3_1.heavy 489.046 / 500.295 N/A 26.239700317382812 47 17 10 10 10 4.044480224356621 24.725055990577275 0.0 3 0.9764030322918547 8.018193804335777 1542.0 11.1 17.0 - - - - - - - 656.7777777777778 5 9 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 137 18 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9872.[MT7]-LPVSSK[MT7]PGK[MT7].3y7_1.heavy 448.957 / 990.619 N/A N/A - - - - - - - - - 0.0 - - - - - - - RFC1 replication factor C (activator 1) 1, 145kDa 139 18 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9872.[MT7]-LPVSSK[MT7]PGK[MT7].3y3_1.heavy 448.957 / 445.289 N/A N/A - - - - - - - - - 0.0 - - - - - - - RFC1 replication factor C (activator 1) 1, 145kDa 141 18 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9872.[MT7]-LPVSSK[MT7]PGK[MT7].3y6_1.heavy 448.957 / 891.55 N/A N/A - - - - - - - - - 0.0 - - - - - - - RFC1 replication factor C (activator 1) 1, 145kDa 143 18 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9872.[MT7]-LPVSSK[MT7]PGK[MT7].3y8_2.heavy 448.957 / 544.339 N/A N/A - - - - - - - - - 0.0 - - - - - - - RFC1 replication factor C (activator 1) 1, 145kDa 145 19 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7093.[MT7]-VVSQSLQHYLELGR.3y7_1.heavy 591.664 / 887.473 3186.0 34.57857608795166 40 20 9 3 8 14.40875490749514 6.940224928663478 0.07149887084960938 4 0.9911145230861125 13.082775743866137 3186.0 10.735018050541516 1.0 - - - - - - - 646.4444444444445 13 9 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 147 19 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7093.[MT7]-VVSQSLQHYLELGR.3y6_1.heavy 591.664 / 750.414 6787.0 34.57857608795166 40 20 9 3 8 14.40875490749514 6.940224928663478 0.07149887084960938 4 0.9911145230861125 13.082775743866137 6787.0 16.4105524038737 0.0 - - - - - - - 677.3333333333334 13 9 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 149 19 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7093.[MT7]-VVSQSLQHYLELGR.3b5_1.heavy 591.664 / 645.369 3463.0 34.57857608795166 40 20 9 3 8 14.40875490749514 6.940224928663478 0.07149887084960938 4 0.9911145230861125 13.082775743866137 3463.0 7.251046931407942 1.0 - - - - - - - 727.375 15 8 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 151 19 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7093.[MT7]-VVSQSLQHYLELGR.3y5_1.heavy 591.664 / 587.351 4294.0 34.57857608795166 40 20 9 3 8 14.40875490749514 6.940224928663478 0.07149887084960938 4 0.9911145230861125 13.082775743866137 4294.0 2.1934925041643534 0.0 - - - - - - - 779.25 8 8 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 153 20 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9871.[MT7]-K[MT7]LVSETVK[MT7].3y3_1.heavy 445.957 / 491.331 8554.0 20.465599060058594 33 17 0 10 6 3.3012734227538534 23.881810533519616 0.0 5 0.9731237198968327 7.511043494674852 8554.0 12.04299953750705 3.0 - - - - - - - 412.5 85 6 RFC1 replication factor C (activator 1) 1, 145kDa 155 20 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9871.[MT7]-K[MT7]LVSETVK[MT7].3y4_1.heavy 445.957 / 620.374 3602.0 20.465599060058594 33 17 0 10 6 3.3012734227538534 23.881810533519616 0.0 5 0.9731237198968327 7.511043494674852 3602.0 17.049466666666667 0.0 - - - - - - - 250.0 7 9 RFC1 replication factor C (activator 1) 1, 145kDa 157 20 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9871.[MT7]-K[MT7]LVSETVK[MT7].3b2_1.heavy 445.957 / 530.39 1801.0 20.465599060058594 33 17 0 10 6 3.3012734227538534 23.881810533519616 0.0 5 0.9731237198968327 7.511043494674852 1801.0 2.550888888888889 19.0 - - - - - - - 739.2857142857143 16 7 RFC1 replication factor C (activator 1) 1, 145kDa 159 20 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9871.[MT7]-K[MT7]LVSETVK[MT7].3y5_1.heavy 445.957 / 707.406 8329.0 20.465599060058594 33 17 0 10 6 3.3012734227538534 23.881810533519616 0.0 5 0.9731237198968327 7.511043494674852 8329.0 33.297491111111114 0.0 - - - - - - - 375.0 16 3 RFC1 replication factor C (activator 1) 1, 145kDa 161 21 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9859.[MT7]-GDNIYEWR.2y4_1.heavy 598.794 / 653.304 4605.0 29.667299270629883 45 15 10 10 10 2.061182022017929 40.90467224643365 0.0 3 0.9529597802666914 5.667746028739297 4605.0 2.691877133105802 2.0 - - - - - - - 261.5 11 8 UBE2E3;UBE2E1;UBE2E2 ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast);ubiquitin-conjugating enzyme E2E 1 (UBC4/5 homolog, yeast);ubiquitin-conjugating enzyme E2E 2 (UBC4/5 homolog, yeast) 163 21 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9859.[MT7]-GDNIYEWR.2b4_1.heavy 598.794 / 544.285 9211.0 29.667299270629883 45 15 10 10 10 2.061182022017929 40.90467224643365 0.0 3 0.9529597802666914 5.667746028739297 9211.0 14.585888257273092 0.0 - - - - - - - 349.0 18 6 UBE2E3;UBE2E1;UBE2E2 ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast);ubiquitin-conjugating enzyme E2E 1 (UBC4/5 homolog, yeast);ubiquitin-conjugating enzyme E2E 2 (UBC4/5 homolog, yeast) 165 21 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9859.[MT7]-GDNIYEWR.2b6_1.heavy 598.794 / 836.391 9002.0 29.667299270629883 45 15 10 10 10 2.061182022017929 40.90467224643365 0.0 3 0.9529597802666914 5.667746028739297 9002.0 22.840722604608732 0.0 - - - - - - - 272.0 18 10 UBE2E3;UBE2E1;UBE2E2 ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast);ubiquitin-conjugating enzyme E2E 1 (UBC4/5 homolog, yeast);ubiquitin-conjugating enzyme E2E 2 (UBC4/5 homolog, yeast) 167 21 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9859.[MT7]-GDNIYEWR.2y6_1.heavy 598.794 / 880.431 10048.0 29.667299270629883 45 15 10 10 10 2.061182022017929 40.90467224643365 0.0 3 0.9529597802666914 5.667746028739297 10048.0 22.799999999999997 0.0 - - - - - - - 209.0 20 8 UBE2E3;UBE2E1;UBE2E2 ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast);ubiquitin-conjugating enzyme E2E 1 (UBC4/5 homolog, yeast);ubiquitin-conjugating enzyme E2E 2 (UBC4/5 homolog, yeast) 169 22 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9857.[MT7]-LSTSAK[MT7].2y4_1.heavy 447.779 / 550.332 9772.0 17.593000411987305 40 20 2 10 8 11.925088019120922 8.385682339590115 0.0 4 0.9970378465916978 22.669990298148498 9772.0 30.455755258126196 0.0 - - - - - - - 209.0 19 5 UBE2E3;UBE2E2 ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast);ubiquitin-conjugating enzyme E2E 2 (UBC4/5 homolog, yeast) 171 22 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9857.[MT7]-LSTSAK[MT7].2y5_1.heavy 447.779 / 637.364 42053.0 17.593000411987305 40 20 2 10 8 11.925088019120922 8.385682339590115 0.0 4 0.9970378465916978 22.669990298148498 42053.0 75.30981375358166 1.0 - - - - - - - 232.33333333333334 252 3 UBE2E3;UBE2E2 ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast);ubiquitin-conjugating enzyme E2E 2 (UBC4/5 homolog, yeast) 173 22 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9857.[MT7]-LSTSAK[MT7].2b4_1.heavy 447.779 / 533.305 1919.0 17.593000411987305 40 20 2 10 8 11.925088019120922 8.385682339590115 0.0 4 0.9970378465916978 22.669990298148498 1919.0 4.10945558739255 9.0 - - - - - - - 261.5 13 6 UBE2E3;UBE2E2 ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast);ubiquitin-conjugating enzyme E2E 2 (UBC4/5 homolog, yeast) 175 22 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9857.[MT7]-LSTSAK[MT7].2y3_1.heavy 447.779 / 449.284 13436.0 17.593000411987305 40 20 2 10 8 11.925088019120922 8.385682339590115 0.0 4 0.9970378465916978 22.669990298148498 13436.0 27.228040804545103 0.0 - - - - - - - 697.6666666666666 26 9 UBE2E3;UBE2E2 ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast);ubiquitin-conjugating enzyme E2E 2 (UBC4/5 homolog, yeast) 177 23 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9856.[MT7]-RC[CAM]PGGLPGHAGGAAPGRGAAGR.4b8_1.heavy 536.784 / 939.495 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 179 23 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9856.[MT7]-RC[CAM]PGGLPGHAGGAAPGRGAAGR.4b5_1.heavy 536.784 / 672.337 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 181 23 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9856.[MT7]-RC[CAM]PGGLPGHAGGAAPGRGAAGR.4y13_2.heavy 536.784 / 534.786 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 183 23 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9856.[MT7]-RC[CAM]PGGLPGHAGGAAPGRGAAGR.4b6_1.heavy 536.784 / 785.421 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 185 24 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7087.[MT7]-EC[CAM]SLDSDYFK[MT7].2y5_1.heavy 776.366 / 803.406 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 187 24 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7087.[MT7]-EC[CAM]SLDSDYFK[MT7].2y3_1.heavy 776.366 / 601.347 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 189 24 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7087.[MT7]-EC[CAM]SLDSDYFK[MT7].2b7_1.heavy 776.366 / 951.385 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 191 24 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7087.[MT7]-EC[CAM]SLDSDYFK[MT7].2b5_1.heavy 776.366 / 749.326 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 193 25 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7086.[MT7]-TTHQDEEVFK[MT7].3y6_1.heavy 507.931 / 910.464 702.0 21.081300735473633 44 14 10 10 10 1.0726789142540065 56.834909242521505 0.0 3 0.9439717892768701 5.189315889892584 702.0 0.7 1.0 - - - - - - - 0.0 1 0 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 195 25 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7086.[MT7]-TTHQDEEVFK[MT7].3y3_1.heavy 507.931 / 537.352 5618.0 21.081300735473633 44 14 10 10 10 1.0726789142540065 56.834909242521505 0.0 3 0.9439717892768701 5.189315889892584 5618.0 7.410703818598555 1.0 - - - - - - - 748.8 11 10 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 197 25 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7086.[MT7]-TTHQDEEVFK[MT7].3y4_1.heavy 507.931 / 666.394 9832.0 21.081300735473633 44 14 10 10 10 1.0726789142540065 56.834909242521505 0.0 3 0.9439717892768701 5.189315889892584 9832.0 21.503565304935464 0.0 - - - - - - - 321.75 19 8 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 199 25 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7086.[MT7]-TTHQDEEVFK[MT7].3y2_1.heavy 507.931 / 438.283 19195.0 21.081300735473633 44 14 10 10 10 1.0726789142540065 56.834909242521505 0.0 3 0.9439717892768701 5.189315889892584 19195.0 27.065978585829086 0.0 - - - - - - - 802.2857142857143 38 7 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 201 26 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7088.[MT7]-NLPYGFIQELVR.2y8_1.heavy 796.949 / 961.547 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 203 26 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7088.[MT7]-NLPYGFIQELVR.2y9_1.heavy 796.949 / 1124.61 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 205 26 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7088.[MT7]-NLPYGFIQELVR.2b6_1.heavy 796.949 / 836.442 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 207 26 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7088.[MT7]-NLPYGFIQELVR.2y10_1.heavy 796.949 / 1221.66 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 209 27 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9865.[MT7]-LVSETVK[MT7].2y4_1.heavy 532.334 / 620.374 N/A N/A - - - - - - - - - 0.0 - - - - - - - RFC1 replication factor C (activator 1) 1, 145kDa 211 27 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9865.[MT7]-LVSETVK[MT7].2y5_1.heavy 532.334 / 707.406 N/A N/A - - - - - - - - - 0.0 - - - - - - - RFC1 replication factor C (activator 1) 1, 145kDa 213 27 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9865.[MT7]-LVSETVK[MT7].2y6_1.heavy 532.334 / 806.474 N/A N/A - - - - - - - - - 0.0 - - - - - - - RFC1 replication factor C (activator 1) 1, 145kDa 215 27 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9865.[MT7]-LVSETVK[MT7].2b5_1.heavy 532.334 / 674.384 N/A N/A - - - - - - - - - 0.0 - - - - - - - RFC1 replication factor C (activator 1) 1, 145kDa 217 28 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9864.[MT7]-EDDFK[MT7].2y4_1.heavy 471.245 / 668.337 2836.0 19.72879981994629 33 17 2 10 4 3.8243840524942585 26.148001515376087 0.0 8 0.9700250961375765 7.11037704853194 2836.0 5.938621015794949 7.0 - - - - - - - 290.6666666666667 31 9 RFC1 replication factor C (activator 1) 1, 145kDa 219 28 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9864.[MT7]-EDDFK[MT7].2b3_1.heavy 471.245 / 504.206 7634.0 19.72879981994629 33 17 2 10 4 3.8243840524942585 26.148001515376087 0.0 8 0.9700250961375765 7.11037704853194 7634.0 7.6981782177177696 0.0 - - - - - - - 327.0 15 4 RFC1 replication factor C (activator 1) 1, 145kDa 221 28 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9864.[MT7]-EDDFK[MT7].2b4_1.heavy 471.245 / 651.274 1091.0 19.72879981994629 33 17 2 10 4 3.8243840524942585 26.148001515376087 0.0 8 0.9700250961375765 7.11037704853194 1091.0 1.5013761467889908 23.0 - - - - - - - 354.25 15 8 RFC1 replication factor C (activator 1) 1, 145kDa 223 28 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9864.[MT7]-EDDFK[MT7].2y3_1.heavy 471.245 / 553.31 2181.0 19.72879981994629 33 17 2 10 4 3.8243840524942585 26.148001515376087 0.0 8 0.9700250961375765 7.11037704853194 2181.0 2.801376146788991 12.0 - - - - - - - 290.6666666666667 5 6 RFC1 replication factor C (activator 1) 1, 145kDa 225 29 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 TPX_ECO57.AQTFTLVAK.2y7.peptide 489.78 / 779.47 1088440.0 27.612499237060547 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 1088440.0 4332.147225919695 0.0 - - - - - - - 1453.0 2176 1 227 29 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 TPX_ECO57.AQTFTLVAK.2y6.peptide 489.78 / 678.42 417235.0 27.612499237060547 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 417235.0 214.9963692632104 0.0 - - - - - - - 484.0 834 1 229 29 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 TPX_ECO57.AQTFTLVAK.2y5.peptide 489.78 / 531.35 343862.0 27.612499237060547 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 343862.0 241.1540946409321 0.0 - - - - - - - 242.0 687 1 231 30 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9863.[MT7]-SLIER.2b3_1.heavy 381.236 / 458.31 N/A N/A - - - - - - - - - 0.0 - - - - - - - RFC1;TBC1D17 replication factor C (activator 1) 1, 145kDa;TBC1 domain family, member 17 233 30 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9863.[MT7]-SLIER.2y4_1.heavy 381.236 / 530.33 N/A N/A - - - - - - - - - 0.0 - - - - - - - RFC1;TBC1D17 replication factor C (activator 1) 1, 145kDa;TBC1 domain family, member 17 235 30 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9863.[MT7]-SLIER.2b4_1.heavy 381.236 / 587.352 N/A N/A - - - - - - - - - 0.0 - - - - - - - RFC1;TBC1D17 replication factor C (activator 1) 1, 145kDa;TBC1 domain family, member 17 237 30 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9863.[MT7]-SLIER.2y1_1.heavy 381.236 / 175.119 N/A N/A - - - - - - - - - 0.0 - - - - - - - RFC1;TBC1D17 replication factor C (activator 1) 1, 145kDa;TBC1 domain family, member 17 239 31 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7081.[MT7]-NNESQWK[MT7].2b3_1.heavy 597.311 / 502.238 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 241 31 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7081.[MT7]-NNESQWK[MT7].2y4_1.heavy 597.311 / 692.385 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 243 31 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7081.[MT7]-NNESQWK[MT7].2b4_1.heavy 597.311 / 589.27 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 245 31 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7081.[MT7]-NNESQWK[MT7].2y6_1.heavy 597.311 / 935.47 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 247 32 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9862.[MT7]-ELAEITLDPPPNC[CAM]SAGPK[MT7].3b4_1.heavy 733.052 / 587.316 8268.0 31.553499221801758 42 12 10 10 10 0.87294264779479 58.443819982379196 0.0 3 0.8881804144958421 3.655703197523593 8268.0 9.50959057051469 0.0 - - - - - - - 741.5 16 8 UBE2E3;UBE2E2 ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast);ubiquitin-conjugating enzyme E2E 2 (UBC4/5 homolog, yeast) 249 32 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9862.[MT7]-ELAEITLDPPPNC[CAM]SAGPK[MT7].3y8_1.heavy 733.052 / 974.485 3415.0 31.553499221801758 42 12 10 10 10 0.87294264779479 58.443819982379196 0.0 3 0.8881804144958421 3.655703197523593 3415.0 6.5413812241432305 0.0 - - - - - - - 215.8 6 10 UBE2E3;UBE2E2 ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast);ubiquitin-conjugating enzyme E2E 2 (UBC4/5 homolog, yeast) 251 32 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9862.[MT7]-ELAEITLDPPPNC[CAM]SAGPK[MT7].3y9_2.heavy 733.052 / 536.272 8808.0 31.553499221801758 42 12 10 10 10 0.87294264779479 58.443819982379196 0.0 3 0.8881804144958421 3.655703197523593 8808.0 4.806026631252777 0.0 - - - - - - - 719.0 17 9 UBE2E3;UBE2E2 ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast);ubiquitin-conjugating enzyme E2E 2 (UBC4/5 homolog, yeast) 253 32 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9862.[MT7]-ELAEITLDPPPNC[CAM]SAGPK[MT7].3y9_1.heavy 733.052 / 1071.54 2157.0 31.553499221801758 42 12 10 10 10 0.87294264779479 58.443819982379196 0.0 3 0.8881804144958421 3.655703197523593 2157.0 11.092870694223633 1.0 - - - - - - - 667.5714285714286 5 7 UBE2E3;UBE2E2 ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast);ubiquitin-conjugating enzyme E2E 2 (UBC4/5 homolog, yeast) 255 33 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7080.[MT7]-EVFSDFK[MT7].2y4_1.heavy 580.315 / 640.342 16397.0 30.5039005279541 40 16 4 10 10 2.307354633180094 34.62814390661384 0.0 3 0.9628718756782126 6.384956049470855 16397.0 46.75575528761062 0.0 - - - - - - - 300.0 32 12 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 257 33 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7080.[MT7]-EVFSDFK[MT7].2y5_1.heavy 580.315 / 787.411 17996.0 30.5039005279541 40 16 4 10 10 2.307354633180094 34.62814390661384 0.0 3 0.9628718756782126 6.384956049470855 17996.0 86.33581000000001 0.0 - - - - - - - 320.0 35 10 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 259 33 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7080.[MT7]-EVFSDFK[MT7].2y6_1.heavy 580.315 / 886.479 N/A 30.5039005279541 40 16 4 10 10 2.307354633180094 34.62814390661384 0.0 3 0.9628718756782126 6.384956049470855 18196.0 7.558397691819424 1.0 - - - - - - - 333.3333333333333 103 3 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 261 33 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7080.[MT7]-EVFSDFK[MT7].2b5_1.heavy 580.315 / 722.348 25994.0 30.5039005279541 40 16 4 10 10 2.307354633180094 34.62814390661384 0.0 3 0.9628718756782126 6.384956049470855 25994.0 25.797030991892097 1.0 - - - - - - - 314.2857142857143 52 7 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 263 34 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9861.[MT7]-DNWSPALTISK[MT7].3b6_1.heavy 507.283 / 815.38 6881.0 31.44267463684082 40 14 10 6 10 1.433369559222759 47.29231656121746 0.0399017333984375 3 0.9318750214374502 4.701238353128611 6881.0 69.95049723756907 0.0 - - - - - - - 221.22222222222223 13 9 UBE2E3;UBE2E1;UBE2E2 ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast);ubiquitin-conjugating enzyme E2E 1 (UBC4/5 homolog, yeast);ubiquitin-conjugating enzyme E2E 2 (UBC4/5 homolog, yeast) 265 34 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9861.[MT7]-DNWSPALTISK[MT7].3b4_1.heavy 507.283 / 647.291 7786.0 31.44267463684082 40 14 10 6 10 1.433369559222759 47.29231656121746 0.0399017333984375 3 0.9318750214374502 4.701238353128611 7786.0 20.4328729281768 0.0 - - - - - - - 261.44444444444446 15 9 UBE2E3;UBE2E1;UBE2E2 ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast);ubiquitin-conjugating enzyme E2E 1 (UBC4/5 homolog, yeast);ubiquitin-conjugating enzyme E2E 2 (UBC4/5 homolog, yeast) 267 34 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9861.[MT7]-DNWSPALTISK[MT7].3b3_1.heavy 507.283 / 560.258 3984.0 31.44267463684082 40 14 10 6 10 1.433369559222759 47.29231656121746 0.0399017333984375 3 0.9318750214374502 4.701238353128611 3984.0 3.1444356748224154 0.0 - - - - - - - 701.375 7 8 UBE2E3;UBE2E1;UBE2E2 ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast);ubiquitin-conjugating enzyme E2E 1 (UBC4/5 homolog, yeast);ubiquitin-conjugating enzyme E2E 2 (UBC4/5 homolog, yeast) 269 34 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9861.[MT7]-DNWSPALTISK[MT7].3y4_1.heavy 507.283 / 592.379 11770.0 31.44267463684082 40 14 10 6 10 1.433369559222759 47.29231656121746 0.0399017333984375 3 0.9318750214374502 4.701238353128611 11770.0 39.883609576427254 0.0 - - - - - - - 610.875 23 8 UBE2E3;UBE2E1;UBE2E2 ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast);ubiquitin-conjugating enzyme E2E 1 (UBC4/5 homolog, yeast);ubiquitin-conjugating enzyme E2E 2 (UBC4/5 homolog, yeast) 271 35 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7083.[MT7]-QSQLAQDER.2y8_1.heavy 609.813 / 946.459 2147.0 16.759266535441082 28 7 8 5 8 0.8629823269931365 73.07515888158989 0.045200347900390625 4 0.7429993766344223 2.380246644955105 2147.0 19.622897106725425 0.0 - - - - - - - 249.0 4 8 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 273 35 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7083.[MT7]-QSQLAQDER.2y5_1.heavy 609.813 / 618.284 920.0 16.759266535441082 28 7 8 5 8 0.8629823269931365 73.07515888158989 0.045200347900390625 4 0.7429993766344223 2.380246644955105 920.0 1.5999999999999999 5.0 - - - - - - - 306.77777777777777 2 9 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 275 35 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7083.[MT7]-QSQLAQDER.2b4_1.heavy 609.813 / 601.343 N/A 16.759266535441082 28 7 8 5 8 0.8629823269931365 73.07515888158989 0.045200347900390625 4 0.7429993766344223 2.380246644955105 5675.0 3.476579211875982 4.0 - - - - - - - 383.5 15 2 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 277 35 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7083.[MT7]-QSQLAQDER.2b7_1.heavy 609.813 / 915.465 4754.0 16.759266535441082 28 7 8 5 8 0.8629823269931365 73.07515888158989 0.045200347900390625 4 0.7429993766344223 2.380246644955105 4754.0 37.265847146253826 0.0 - - - - - - - 229.875 9 8 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 279 36 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7082.[MT7]-EQWDQLPR.2y4_1.heavy 608.316 / 513.314 7416.0 28.600099563598633 38 18 2 10 8 4.328038316155199 23.105155891696153 0.0 4 0.9846890914846534 9.961074923740883 7416.0 10.21584913244207 2.0 - - - - - - - 319.0 14 8 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 281 36 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7082.[MT7]-EQWDQLPR.2b4_1.heavy 608.316 / 703.317 5330.0 28.600099563598633 38 18 2 10 8 4.328038316155199 23.105155891696153 0.0 4 0.9846890914846534 9.961074923740883 5330.0 11.732014466097025 2.0 - - - - - - - 782.0 38 8 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 283 36 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7082.[MT7]-EQWDQLPR.2y6_1.heavy 608.316 / 814.421 5099.0 28.600099563598633 38 18 2 10 8 4.328038316155199 23.105155891696153 0.0 4 0.9846890914846534 9.961074923740883 5099.0 15.759654242123542 0.0 - - - - - - - 331.42857142857144 10 7 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 285 36 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7082.[MT7]-EQWDQLPR.2y7_1.heavy 608.316 / 942.479 3940.0 28.600099563598633 38 18 2 10 8 4.328038316155199 23.105155891696153 0.0 4 0.9846890914846534 9.961074923740883 3940.0 4.346373562703049 1.0 - - - - - - - 270.6666666666667 8 6 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 287 37 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7085.[MT7]-THPVC[CAM]NLVASLR.3b6_1.heavy 504.281 / 853.411 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 289 37 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7085.[MT7]-THPVC[CAM]NLVASLR.3b4_1.heavy 504.281 / 579.337 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 291 37 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7085.[MT7]-THPVC[CAM]NLVASLR.3y8_1.heavy 504.281 / 932.498 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 293 37 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7085.[MT7]-THPVC[CAM]NLVASLR.3y5_1.heavy 504.281 / 545.341 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 295 38 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7084.[MT7]-ELFEEVISK[MT7].2b4_1.heavy 691.394 / 663.347 N/A 35.47506841023763 33 13 4 6 10 1.079899183601289 56.40182071247875 0.03639984130859375 3 0.908742492904748 4.053859204805492 2809.0 2.1589239965841163 11.0 - - - - - - - 767.0 11 9 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 297 38 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7084.[MT7]-ELFEEVISK[MT7].2y6_1.heavy 691.394 / 848.485 3161.0 35.47506841023763 33 13 4 6 10 1.079899183601289 56.40182071247875 0.03639984130859375 3 0.908742492904748 4.053859204805492 3161.0 3.740804153358398 1.0 - - - - - - - 716.625 6 8 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 299 38 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7084.[MT7]-ELFEEVISK[MT7].2b5_1.heavy 691.394 / 792.39 2458.0 35.47506841023763 33 13 4 6 10 1.079899183601289 56.40182071247875 0.03639984130859375 3 0.908742492904748 4.053859204805492 2458.0 3.6764957264957263 0.0 - - - - - - - 691.3636363636364 4 11 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 301 38 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7084.[MT7]-ELFEEVISK[MT7].2y7_1.heavy 691.394 / 995.553 2107.0 35.47506841023763 33 13 4 6 10 1.079899183601289 56.40182071247875 0.03639984130859375 3 0.908742492904748 4.053859204805492 2107.0 8.103846153846154 0.0 - - - - - - - 184.73684210526315 4 19 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 303 39 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9844.[MT7]-LGQQPLPR.2y5_1.heavy 526.82 / 610.367 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 305 39 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9844.[MT7]-LGQQPLPR.2b4_1.heavy 526.82 / 571.332 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 307 39 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9844.[MT7]-LGQQPLPR.2b6_1.heavy 526.82 / 781.469 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 309 39 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9844.[MT7]-LGQQPLPR.2y7_1.heavy 526.82 / 795.447 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 311 40 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9847.[MT7]-VFVVHIPR.3b4_1.heavy 370.902 / 589.383 4530.0 30.78580093383789 45 15 10 10 10 1.7925028476980913 44.10733128396914 0.0 3 0.9595728207189194 6.117184432653498 4530.0 28.774620015999325 0.0 - - - - - - - 283.0 9 2 CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 313 40 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9847.[MT7]-VFVVHIPR.3y4_1.heavy 370.902 / 522.315 3020.0 30.78580093383789 45 15 10 10 10 1.7925028476980913 44.10733128396914 0.0 3 0.9595728207189194 6.117184432653498 3020.0 20.231408379606258 0.0 - - - - - - - 236.0 6 4 CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 315 40 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9847.[MT7]-VFVVHIPR.3b3_1.heavy 370.902 / 490.315 7738.0 30.78580093383789 45 15 10 10 10 1.7925028476980913 44.10733128396914 0.0 3 0.9595728207189194 6.117184432653498 7738.0 58.191653965447074 0.0 - - - - - - - 264.2 15 5 CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 317 40 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9847.[MT7]-VFVVHIPR.3b2_1.heavy 370.902 / 391.246 3586.0 30.78580093383789 45 15 10 10 10 1.7925028476980913 44.10733128396914 0.0 3 0.9595728207189194 6.117184432653498 3586.0 17.714603174603177 1.0 - - - - - - - 236.0 7 4 CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 319 41 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9848.[MT7]-C[CAM]LGPSARGPG.2y8_1.heavy 558.291 / 698.358 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 321 41 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9848.[MT7]-C[CAM]LGPSARGPG.2y9_1.heavy 558.291 / 811.442 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 323 41 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9848.[MT7]-C[CAM]LGPSARGPG.2b5_1.heavy 558.291 / 659.33 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 325 41 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9848.[MT7]-C[CAM]LGPSARGPG.2y7_1.heavy 558.291 / 641.337 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 327 42 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 ODP2_ECOLI.AEAPAAAPAAK.2y7.peptide 484.26 / 599.35 195987.0 15.171799659729004 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 195987.0 279.28521080266165 0.0 - - - - - - - 752.5714285714286 391 7 329 42 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 ODP2_ECOLI.AEAPAAAPAAK.2y8.peptide 484.26 / 696.4 298964.0 15.171799659729004 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 298964.0 640.2522087085955 0.0 - - - - - - - 258.0 597 4 331 42 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 ODP2_ECOLI.AEAPAAAPAAK.2y6.peptide 484.26 / 528.31 163800.0 15.171799659729004 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 163800.0 689.7236530896524 0.0 - - - - - - - 229.33333333333334 327 3 333 43 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7078.[MT7]-VEEIVAK[MT7].2y4_1.heavy 538.334 / 574.404 5911.0 24.417600631713867 44 14 10 10 10 1.846562322637338 44.56504840463663 0.0 3 0.9437054999173663 5.176910551419412 5911.0 10.924999999999999 0.0 - - - - - - - 660.8571428571429 11 7 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 335 43 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7078.[MT7]-VEEIVAK[MT7].2b3_1.heavy 538.334 / 502.263 5911.0 24.417600631713867 44 14 10 10 10 1.846562322637338 44.56504840463663 0.0 3 0.9437054999173663 5.176910551419412 5911.0 5.404999999999999 2.0 - - - - - - - 257.0 11 4 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 337 43 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7078.[MT7]-VEEIVAK[MT7].2b4_1.heavy 538.334 / 615.347 3855.0 24.417600631713867 44 14 10 10 10 1.846562322637338 44.56504840463663 0.0 3 0.9437054999173663 5.176910551419412 3855.0 5.1000000000000005 2.0 - - - - - - - 257.0 7 4 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 339 43 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7078.[MT7]-VEEIVAK[MT7].2y6_1.heavy 538.334 / 832.49 8224.0 24.417600631713867 44 14 10 10 10 1.846562322637338 44.56504840463663 0.0 3 0.9437054999173663 5.176910551419412 8224.0 35.626666666666665 0.0 - - - - - - - 257.0 16 9 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 341 44 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7077.[MT7]-STIAIEK[MT7].2y4_1.heavy 525.326 / 604.379 22590.0 25.787799835205078 47 17 10 10 10 2.6729911877020602 30.676432519663337 0.0 3 0.9769487438293403 8.112921433743198 22590.0 51.0 0.0 - - - - - - - 669.3333333333334 45 9 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 343 44 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7077.[MT7]-STIAIEK[MT7].2b4_1.heavy 525.326 / 517.31 11044.0 25.787799835205078 47 17 10 10 10 2.6729911877020602 30.676432519663337 0.0 3 0.9769487438293403 8.112921433743198 11044.0 10.292857142857143 0.0 - - - - - - - 251.0 22 1 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 345 44 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7077.[MT7]-STIAIEK[MT7].2y3_1.heavy 525.326 / 533.341 13805.0 25.787799835205078 47 17 10 10 10 2.6729911877020602 30.676432519663337 0.0 3 0.9769487438293403 8.112921433743198 13805.0 27.5 0.0 - - - - - - - 585.6666666666666 27 9 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 347 44 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7077.[MT7]-STIAIEK[MT7].2y6_1.heavy 525.326 / 818.51 16566.0 25.787799835205078 47 17 10 10 10 2.6729911877020602 30.676432519663337 0.0 3 0.9769487438293403 8.112921433743198 16566.0 12.946153846153846 0.0 - - - - - - - 251.0 33 3 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 349 45 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7076.[MT7]-HLLNSPTDPFNR.3y7_1.heavy 518.943 / 846.41 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 351 45 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7076.[MT7]-HLLNSPTDPFNR.3b4_1.heavy 518.943 / 622.379 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 353 45 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7076.[MT7]-HLLNSPTDPFNR.3b3_1.heavy 518.943 / 508.336 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 355 45 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7076.[MT7]-HLLNSPTDPFNR.3y4_1.heavy 518.943 / 533.283 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 357 46 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7075.[MT7]-YGFEPK[MT7].2y4_1.heavy 514.786 / 664.379 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 359 46 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7075.[MT7]-YGFEPK[MT7].2b3_1.heavy 514.786 / 512.263 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 361 46 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7075.[MT7]-YGFEPK[MT7].2y5_1.heavy 514.786 / 721.4 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 363 46 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7075.[MT7]-YGFEPK[MT7].2b4_1.heavy 514.786 / 641.305 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 365 47 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7074.[MT7]-VENPEK[MT7].2y4_1.heavy 502.287 / 631.353 2611.0 16.902600288391113 27 14 2 5 6 2.6452925948085677 37.80300152665597 0.04559898376464844 5 0.9373935942927064 4.906374766534012 2611.0 9.184238847822572 4.0 - - - - - - - 307.26666666666665 27 15 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 367 47 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7074.[MT7]-VENPEK[MT7].2y5_1.heavy 502.287 / 760.396 4147.0 16.902600288391113 27 14 2 5 6 2.6452925948085677 37.80300152665597 0.04559898376464844 5 0.9373935942927064 4.906374766534012 4147.0 26.5262861792398 0.0 - - - - - - - 273.3333333333333 8 9 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 369 47 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7074.[MT7]-VENPEK[MT7].2y3_1.heavy 502.287 / 517.31 5376.0 16.902600288391113 27 14 2 5 6 2.6452925948085677 37.80300152665597 0.04559898376464844 5 0.9373935942927064 4.906374766534012 5376.0 15.767628881919059 0.0 - - - - - - - 365.0 10 8 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 371 47 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7074.[MT7]-VENPEK[MT7].2b5_1.heavy 502.287 / 713.359 1075.0 16.902600288391113 27 14 2 5 6 2.6452925948085677 37.80300152665597 0.04559898376464844 5 0.9373935942927064 4.906374766534012 1075.0 0.8755496245722931 8.0 - - - - - - - 256.0833333333333 4 12 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 373 48 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7073.[MT7]-TVEDLK[MT7].2y4_1.heavy 496.797 / 648.369 5401.0 22.289949893951416 42 16 10 6 10 3.846976825952504 25.99443784672142 0.03980064392089844 3 0.9617298949831246 6.288364104533318 5401.0 9.4 1.0 - - - - - - - 393.0 10 10 UBE4B;SHROOM2 ubiquitination factor E4B (UFD2 homolog, yeast);shroom family member 2 375 48 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7073.[MT7]-TVEDLK[MT7].2y5_1.heavy 496.797 / 747.437 6629.0 22.289949893951416 42 16 10 6 10 3.846976825952504 25.99443784672142 0.03980064392089844 3 0.9617298949831246 6.288364104533318 6629.0 25.51692464358452 0.0 - - - - - - - 300.44444444444446 13 9 UBE4B;SHROOM2 ubiquitination factor E4B (UFD2 homolog, yeast);shroom family member 2 377 48 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7073.[MT7]-TVEDLK[MT7].2b4_1.heavy 496.797 / 589.295 16694.0 22.289949893951416 42 16 10 6 10 3.846976825952504 25.99443784672142 0.03980064392089844 3 0.9617298949831246 6.288364104533318 16694.0 26.196031207598374 0.0 - - - - - - - 344.0 33 10 UBE4B;SHROOM2 ubiquitination factor E4B (UFD2 homolog, yeast);shroom family member 2 379 48 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7073.[MT7]-TVEDLK[MT7].2y3_1.heavy 496.797 / 519.326 4174.0 22.289949893951416 42 16 10 6 10 3.846976825952504 25.99443784672142 0.03980064392089844 3 0.9617298949831246 6.288364104533318 4174.0 6.260878886441703 3.0 - - - - - - - 421.0 16 7 UBE4B;SHROOM2 ubiquitination factor E4B (UFD2 homolog, yeast);shroom family member 2 381 49 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7072.[MT7]-SLSPGC[CAM]GR.2y5_1.heavy 489.251 / 546.245 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 383 49 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7072.[MT7]-SLSPGC[CAM]GR.2b4_1.heavy 489.251 / 529.31 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 385 49 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7072.[MT7]-SLSPGC[CAM]GR.2y6_1.heavy 489.251 / 633.277 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 387 49 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7072.[MT7]-SLSPGC[CAM]GR.2b7_1.heavy 489.251 / 803.384 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 389 50 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7071.[MT7]-VGIEEK[MT7].2y4_1.heavy 481.792 / 662.384 1393.0 20.8617000579834 50 20 10 10 10 7.893978391159341 12.667883675991872 0.0 3 0.9947115589234183 16.96316763519685 1393.0 0.10666411153559255 15.0 - - - - - - - 290.0 5 8 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 391 50 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7071.[MT7]-VGIEEK[MT7].2y5_1.heavy 481.792 / 719.406 19502.0 20.8617000579834 50 20 10 10 10 7.893978391159341 12.667883675991872 0.0 3 0.9947115589234183 16.96316763519685 19502.0 72.29189655172414 0.0 - - - - - - - 335.1111111111111 39 9 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 393 50 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7071.[MT7]-VGIEEK[MT7].2b4_1.heavy 481.792 / 543.326 4411.0 20.8617000579834 50 20 10 10 10 7.893978391159341 12.667883675991872 0.0 3 0.9947115589234183 16.96316763519685 4411.0 5.486914055860858 0.0 - - - - - - - 813.0 8 8 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 395 50 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7071.[MT7]-VGIEEK[MT7].2y3_1.heavy 481.792 / 549.3 7662.0 20.8617000579834 50 20 10 10 10 7.893978391159341 12.667883675991872 0.0 3 0.9947115589234183 16.96316763519685 7662.0 18.250813404518517 0.0 - - - - - - - 406.0 15 8 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 397 51 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7070.[MT7]-QELFK[MT7].2b3_1.heavy 476.789 / 515.295 4705.0 25.17970085144043 29 13 2 10 4 1.1092129648125992 51.8022562275451 0.0 7 0.9170654643553945 4.255459396284783 4705.0 5.655300964381615 2.0 - - - - - - - 261.0 13 6 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 399 51 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7070.[MT7]-QELFK[MT7].2y4_1.heavy 476.789 / 680.41 7581.0 25.17970085144043 29 13 2 10 4 1.1092129648125992 51.8022562275451 0.0 7 0.9170654643553945 4.255459396284783 7581.0 19.133690248565966 2.0 - - - - - - - 261.0 38 4 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 401 51 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7070.[MT7]-QELFK[MT7].2b4_1.heavy 476.789 / 662.363 3137.0 25.17970085144043 29 13 2 10 4 1.1092129648125992 51.8022562275451 0.0 7 0.9170654643553945 4.255459396284783 3137.0 11.275774729695886 4.0 - - - - - - - 261.0 31 6 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 403 51 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7070.[MT7]-QELFK[MT7].2y3_1.heavy 476.789 / 551.367 3921.0 25.17970085144043 29 13 2 10 4 1.1092129648125992 51.8022562275451 0.0 7 0.9170654643553945 4.255459396284783 3921.0 1.1114421973445208 2.0 - - - - - - - 261.0 10 6 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 405 52 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9852.[MT7]-RC[CAM]PGGLPGHAGGAAPGR.4y8_1.heavy 433.729 / 656.347 6866.0 17.35219955444336 41 11 10 10 10 1.8518634478869567 43.54823016863488 0.0 3 0.854725536351538 3.197894653548738 6866.0 31.508268114585285 0.0 - - - - - - - 306.375 13 8 CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 407 52 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9852.[MT7]-RC[CAM]PGGLPGHAGGAAPGR.4b8_2.heavy 433.729 / 470.251 21907.0 17.35219955444336 41 11 10 10 10 1.8518634478869567 43.54823016863488 0.0 3 0.854725536351538 3.197894653548738 21907.0 33.95957448514788 0.0 - - - - - - - 261.4 43 5 CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 409 52 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9852.[MT7]-RC[CAM]PGGLPGHAGGAAPGR.4y7_1.heavy 433.729 / 585.31 11280.0 17.35219955444336 41 11 10 10 10 1.8518634478869567 43.54823016863488 0.0 3 0.854725536351538 3.197894653548738 11280.0 32.97478115019908 1.0 - - - - - - - 265.375 32 8 CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 411 52 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9852.[MT7]-RC[CAM]PGGLPGHAGGAAPGR.4b6_1.heavy 433.729 / 785.421 2943.0 17.35219955444336 41 11 10 10 10 1.8518634478869567 43.54823016863488 0.0 3 0.854725536351538 3.197894653548738 2943.0 26.324006134969324 0.0 - - - - - - - 353.8333333333333 5 6 CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 413 53 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9851.[MT7]-C[CAM]PGGLPGHAGGAAPGR.3y7_1.heavy 525.936 / 585.31 11333.0 19.050724983215332 36 14 10 2 10 4.755720122471793 21.02730972907313 0.08780097961425781 3 0.9497022225457381 5.4796221509543575 11333.0 26.708645468251596 0.0 - - - - - - - 232.16666666666666 22 6 CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 415 53 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9851.[MT7]-C[CAM]PGGLPGHAGGAAPGR.3y8_1.heavy 525.936 / 656.347 8549.0 19.050724983215332 36 14 10 2 10 4.755720122471793 21.02730972907313 0.08780097961425781 3 0.9497022225457381 5.4796221509543575 8549.0 26.96664429530201 0.0 - - - - - - - 227.42857142857142 17 7 CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 417 53 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9851.[MT7]-C[CAM]PGGLPGHAGGAAPGR.3y11_1.heavy 525.936 / 947.481 1591.0 19.050724983215332 36 14 10 2 10 4.755720122471793 21.02730972907313 0.08780097961425781 3 0.9497022225457381 5.4796221509543575 1591.0 9.195729591352992 0.0 - - - - - - - 398.0 3 1 CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 419 53 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9851.[MT7]-C[CAM]PGGLPGHAGGAAPGR.3b5_1.heavy 525.936 / 629.32 7754.0 19.050724983215332 36 14 10 2 10 4.755720122471793 21.02730972907313 0.08780097961425781 3 0.9497022225457381 5.4796221509543575 7754.0 11.787392993456004 0.0 - - - - - - - 318.4 15 5 CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 421 54 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9854.[MT7]-C[CAM]PGGLPGHAGGAAPGRGAAGR.4y12_2.heavy 497.758 / 499.268 4641.0 18.055700302124023 32 14 2 10 6 2.8931452819315266 28.707895506857145 0.0 5 0.9380894239265865 4.934162566885972 4641.0 4.108023307933662 2.0 - - - - - - - 312.25 9 4 CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 423 54 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9854.[MT7]-C[CAM]PGGLPGHAGGAAPGRGAAGR.4b4_1.heavy 497.758 / 516.236 2320.0 18.055700302124023 32 14 2 10 6 2.8931452819315266 28.707895506857145 0.0 5 0.9380894239265865 4.934162566885972 2320.0 1.4076046953658239 3.0 - - - - - - - 237.66666666666666 28 9 CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 425 54 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9854.[MT7]-C[CAM]PGGLPGHAGGAAPGRGAAGR.4b5_1.heavy 497.758 / 629.32 1428.0 18.055700302124023 32 14 2 10 6 2.8931452819315266 28.707895506857145 0.0 5 0.9380894239265865 4.934162566885972 1428.0 0.8638219168111574 3.0 - - - - - - - 764.7142857142857 3 7 CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 427 54 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9854.[MT7]-C[CAM]PGGLPGHAGGAAPGRGAAGR.4y13_2.heavy 497.758 / 534.786 4462.0 18.055700302124023 32 14 2 10 6 2.8931452819315266 28.707895506857145 0.0 5 0.9380894239265865 4.934162566885972 4462.0 24.46666214645486 0.0 - - - - - - - 178.0 8 5 CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 429 55 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9835.[MT7]-GDILR.2b3_1.heavy 359.222 / 430.242 29541.0 23.900699615478516 29 13 0 10 6 2.8217694842032253 35.43875591532832 0.0 6 0.9278371968864999 4.566240248656855 29541.0 -0.9963237774030347 0.0 - - - - - - - 770.4285714285714 59 7 UTS2;CRK;MCM3AP;RUSC2 urotensin 2;v-crk sarcoma virus CT10 oncogene homolog (avian);minichromosome maintenance complex component 3 associated protein;RUN and SH3 domain containing 2 431 55 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9835.[MT7]-GDILR.2b4_1.heavy 359.222 / 543.326 10350.0 23.900699615478516 29 13 0 10 6 2.8217694842032253 35.43875591532832 0.0 6 0.9278371968864999 4.566240248656855 10350.0 -2.3986095017381217 1.0 - - - - - - - 287.6666666666667 53 6 UTS2;CRK;MCM3AP;RUSC2 urotensin 2;v-crk sarcoma virus CT10 oncogene homolog (avian);minichromosome maintenance complex component 3 associated protein;RUN and SH3 domain containing 2 433 55 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9835.[MT7]-GDILR.2y3_1.heavy 359.222 / 401.287 N/A 23.900699615478516 29 13 0 10 6 2.8217694842032253 35.43875591532832 0.0 6 0.9278371968864999 4.566240248656855 647.0 0.9987475149105367 33.0 - - - - - - - 323.5 26 4 UTS2;CRK;MCM3AP;RUSC2 urotensin 2;v-crk sarcoma virus CT10 oncogene homolog (avian);minichromosome maintenance complex component 3 associated protein;RUN and SH3 domain containing 2 435 55 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9835.[MT7]-GDILR.2y1_1.heavy 359.222 / 175.119 43772.0 23.900699615478516 29 13 0 10 6 2.8217694842032253 35.43875591532832 0.0 6 0.9278371968864999 4.566240248656855 43772.0 -0.37591892820336703 2.0 - - - - - - - 431.0 460 1 UTS2;CRK;MCM3AP;RUSC2 urotensin 2;v-crk sarcoma virus CT10 oncogene homolog (avian);minichromosome maintenance complex component 3 associated protein;RUN and SH3 domain containing 2 437 56 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9833.[MT7]-ALDSDAVVVAVFSGLPAVEK[MT7].3b6_1.heavy 759.098 / 717.354 8022.0 44.90599822998047 44 14 10 10 10 1.348681279910507 52.2430381994473 0.0 3 0.9373746137176966 4.905623253109652 8022.0 31.281643713053203 0.0 - - - - - - - 265.54545454545456 16 22 TRIM37 tripartite motif-containing 37 439 56 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9833.[MT7]-ALDSDAVVVAVFSGLPAVEK[MT7].3b8_1.heavy 759.098 / 915.49 6782.0 44.90599822998047 44 14 10 10 10 1.348681279910507 52.2430381994473 0.0 3 0.9373746137176966 4.905623253109652 6782.0 37.782338118022324 0.0 - - - - - - - 225.69565217391303 13 23 TRIM37 tripartite motif-containing 37 441 56 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9833.[MT7]-ALDSDAVVVAVFSGLPAVEK[MT7].3y5_1.heavy 759.098 / 687.416 15055.0 44.90599822998047 44 14 10 10 10 1.348681279910507 52.2430381994473 0.0 3 0.9373746137176966 4.905623253109652 15055.0 54.35441558441559 0.0 - - - - - - - 307.0 30 18 TRIM37 tripartite motif-containing 37 443 56 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9833.[MT7]-ALDSDAVVVAVFSGLPAVEK[MT7].3b7_1.heavy 759.098 / 816.422 11572.0 44.90599822998047 44 14 10 10 10 1.348681279910507 52.2430381994473 0.0 3 0.9373746137176966 4.905623253109652 11572.0 39.93055551345207 0.0 - - - - - - - 264.7142857142857 23 21 TRIM37 tripartite motif-containing 37 445 57 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9834.[MT7]-LDLLANEGYLNPQNDTVILR.3b4_1.heavy 805.771 / 599.388 7625.0 40.845298767089844 48 18 10 10 10 3.793679684585526 26.35963189151679 0.0 3 0.9810965950783556 8.962018388941793 7625.0 28.677031046662947 0.0 - - - - - - - 286.3333333333333 15 21 TRIM37 tripartite motif-containing 37 447 57 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9834.[MT7]-LDLLANEGYLNPQNDTVILR.3b5_1.heavy 805.771 / 670.426 6549.0 40.845298767089844 48 18 10 10 10 3.793679684585526 26.35963189151679 0.0 3 0.9810965950783556 8.962018388941793 6549.0 15.440310558339299 1.0 - - - - - - - 728.2 13 10 TRIM37 tripartite motif-containing 37 449 57 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9834.[MT7]-LDLLANEGYLNPQNDTVILR.3b8_1.heavy 805.771 / 970.533 6110.0 40.845298767089844 48 18 10 10 10 3.793679684585526 26.35963189151679 0.0 3 0.9810965950783556 8.962018388941793 6110.0 10.003540950299046 0.0 - - - - - - - 713.7 12 10 TRIM37 tripartite motif-containing 37 451 57 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9834.[MT7]-LDLLANEGYLNPQNDTVILR.3y9_1.heavy 805.771 / 1055.58 7722.0 40.845298767089844 48 18 10 10 10 3.793679684585526 26.35963189151679 0.0 3 0.9810965950783556 8.962018388941793 7722.0 20.425657199329695 0.0 - - - - - - - 253.8095238095238 15 21 TRIM37 tripartite motif-containing 37 453 58 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9839.[MT7]-GQEWR.2y4_1.heavy 410.215 / 618.299 3106.0 18.833999633789062 48 20 10 10 8 41.42333651578189 2.4140981488031743 0.0 4 0.9929433915773591 14.68279185353265 3106.0 13.811655319730338 2.0 - - - - - - - 299.0 8 9 LOC123855 hypothetical protein LOC123855 455 58 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9839.[MT7]-GQEWR.2b3_1.heavy 410.215 / 459.232 49700.0 18.833999633789062 48 20 10 10 8 41.42333651578189 2.4140981488031743 0.0 4 0.9929433915773591 14.68279185353265 49700.0 84.61775690308136 0.0 - - - - - - - 709.7142857142857 99 7 LOC123855 hypothetical protein LOC123855 457 58 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9839.[MT7]-GQEWR.2b4_1.heavy 410.215 / 645.311 6005.0 18.833999633789062 48 20 10 10 8 41.42333651578189 2.4140981488031743 0.0 4 0.9929433915773591 14.68279185353265 6005.0 10.225905797101449 2.0 - - - - - - - 1123.7142857142858 22 7 LOC123855 hypothetical protein LOC123855 459 58 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9839.[MT7]-GQEWR.2y2_1.heavy 410.215 / 361.198 66887.0 18.833999633789062 48 20 10 10 8 41.42333651578189 2.4140981488031743 0.0 4 0.9929433915773591 14.68279185353265 66887.0 75.19021379310344 0.0 - - - - - - - 1263.2 133 10 LOC123855 hypothetical protein LOC123855 461 59 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9837.[MT7]-LVIEFSEEYPNK[MT7]PPTVR.4y5_1.heavy 577.321 / 569.341 35066.0 33.29280090332031 43 13 10 10 10 1.1821283514499055 52.701432632078124 0.0 3 0.9245478001995895 4.464338651867325 35066.0 35.17001521375144 0.0 - - - - - - - 779.0 70 7 UBE2B ubiquitin-conjugating enzyme E2B (RAD6 homolog) 463 59 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9837.[MT7]-LVIEFSEEYPNK[MT7]PPTVR.4y8_1.heavy 577.321 / 1052.63 12000.0 33.29280090332031 43 13 10 10 10 1.1821283514499055 52.701432632078124 0.0 3 0.9245478001995895 4.464338651867325 12000.0 73.07692307692307 0.0 - - - - - - - 312.0 24 11 UBE2B ubiquitin-conjugating enzyme E2B (RAD6 homolog) 465 59 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9837.[MT7]-LVIEFSEEYPNK[MT7]PPTVR.4y8_2.heavy 577.321 / 526.82 88990.0 33.29280090332031 43 13 10 10 10 1.1821283514499055 52.701432632078124 0.0 3 0.9245478001995895 4.464338651867325 88990.0 72.54001361287254 0.0 - - - - - - - 312.0 177 2 UBE2B ubiquitin-conjugating enzyme E2B (RAD6 homolog) 467 59 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9837.[MT7]-LVIEFSEEYPNK[MT7]PPTVR.4b4_1.heavy 577.321 / 599.388 66704.0 33.29280090332031 43 13 10 10 10 1.1821283514499055 52.701432632078124 0.0 3 0.9245478001995895 4.464338651867325 66704.0 46.0283438908157 0.0 - - - - - - - 312.0 133 2 UBE2B ubiquitin-conjugating enzyme E2B (RAD6 homolog) 469 60 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9838.[MT7]-AC[CAM]GPPR.2y4_1.heavy 401.212 / 426.246 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 471 60 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9838.[MT7]-AC[CAM]GPPR.2b3_1.heavy 401.212 / 433.199 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 473 60 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9838.[MT7]-AC[CAM]GPPR.2y5_1.heavy 401.212 / 586.277 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 475 60 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9838.[MT7]-AC[CAM]GPPR.2b4_1.heavy 401.212 / 530.251 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 477 61 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 ODP2_ECOLI.EAAPAAAPAAAAAK.2y7.peptide 590.82 / 599.35 458928.0 17.49880027770996 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 458928.0 737.1865721275619 0.0 - - - - - - - 335.0 917 1 479 61 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 ODP2_ECOLI.EAAPAAAPAAAAAK.2y9.peptide 590.82 / 741.43 281863.0 17.49880027770996 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 281863.0 1813.3673316174381 0.0 - - - - - - - 335.0 563 1 481 61 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 ODP2_ECOLI.EAAPAAAPAAAAAK.2y11.peptide 590.82 / 909.52 281527.0 17.49880027770996 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 281527.0 1787.209074195528 0.0 - - - - - - - 335.0 563 1 483 62 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7069.[MT7]-LWLPK[MT7].2b3_1.heavy 472.812 / 557.357 6769.0 33.51275062561035 40 18 10 6 6 6.183564775576086 16.171901424075177 0.039897918701171875 5 0.9899171092472397 12.280166367173 6769.0 24.63241315594974 0.0 - - - - - - - 248.76923076923077 13 13 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 485 62 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7069.[MT7]-LWLPK[MT7].2y4_1.heavy 472.812 / 687.431 8153.0 33.51275062561035 40 18 10 6 6 6.183564775576086 16.171901424075177 0.039897918701171875 5 0.9899171092472397 12.280166367173 8153.0 17.365173713089536 2.0 - - - - - - - 747.0 32 7 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 487 62 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7069.[MT7]-LWLPK[MT7].2y3_1.heavy 472.812 / 501.352 5384.0 33.51275062561035 40 18 10 6 6 6.183564775576086 16.171901424075177 0.039897918701171875 5 0.9899171092472397 12.280166367173 5384.0 21.86059761376834 0.0 - - - - - - - 236.92307692307693 10 13 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 489 62 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7069.[MT7]-LWLPK[MT7].2y2_1.heavy 472.812 / 388.268 42458.0 33.51275062561035 40 18 10 6 6 6.183564775576086 16.171901424075177 0.039897918701171875 5 0.9899171092472397 12.280166367173 42458.0 73.74281588447653 0.0 - - - - - - - 769.0 84 7 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 491 63 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7068.[MT7]-AIADDQR.2y5_1.heavy 466.75 / 604.268 2191.0 15.954500198364258 33 15 0 10 8 2.5882643581639533 38.6359297822798 0.0 4 0.9573969051617514 5.957825126454137 2191.0 8.102968369829682 1.0 - - - - - - - 249.0909090909091 4 11 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 493 63 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7068.[MT7]-AIADDQR.2b4_1.heavy 466.75 / 515.295 4245.0 15.954500198364258 33 15 0 10 8 2.5882643581639533 38.6359297822798 0.0 4 0.9573969051617514 5.957825126454137 4245.0 15.492700729927007 0.0 - - - - - - - 258.77777777777777 8 9 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 495 63 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7068.[MT7]-AIADDQR.2y6_1.heavy 466.75 / 717.353 2738.0 15.954500198364258 33 15 0 10 8 2.5882643581639533 38.6359297822798 0.0 4 0.9573969051617514 5.957825126454137 2738.0 6.928272506082726 2.0 - - - - - - - 639.3333333333334 5 9 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 497 63 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7068.[MT7]-AIADDQR.2b5_1.heavy 466.75 / 630.321 10680.0 15.954500198364258 33 15 0 10 8 2.5882643581639533 38.6359297822798 0.0 4 0.9573969051617514 5.957825126454137 10680.0 10.08680325020223 2.0 - - - - - - - 704.2857142857143 93 7 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 499 64 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7065.[MT7]-LLAEK[MT7].2b3_1.heavy 431.286 / 442.315 2559.0 24.034900665283203 34 16 4 10 4 2.517282583331307 39.72537714365885 0.0 7 0.9607282832202446 6.207129270797653 2559.0 7.863524296508598 2.0 - - - - - - - 256.0 7 3 UBE4B;CCDC104;CSTF3;SASS6;AMPD3;LMNA;UPF0639;MAP7D1;CXCR4;MAP7 ubiquitination factor E4B (UFD2 homolog, yeast);coiled-coil domain containing 104;cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa;spindle assembly 6 homolog (C. elegans);adenosine monophosphate deaminase 3;lamin A/C;UPF0639 protein;MAP7 domain containing 1;chemokine (C-X-C motif) receptor 4;microtubule-associated protein 7 501 64 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7065.[MT7]-LLAEK[MT7].2y4_1.heavy 431.286 / 604.379 7932.0 24.034900665283203 34 16 4 10 4 2.517282583331307 39.72537714365885 0.0 7 0.9607282832202446 6.207129270797653 7932.0 20.914453124999998 2.0 - - - - - - - 256.0 28 5 UBE4B;CCDC104;CSTF3;SASS6;AMPD3;LMNA;UPF0639;MAP7D1;CXCR4;MAP7 ubiquitination factor E4B (UFD2 homolog, yeast);coiled-coil domain containing 104;cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa;spindle assembly 6 homolog (C. elegans);adenosine monophosphate deaminase 3;lamin A/C;UPF0639 protein;MAP7 domain containing 1;chemokine (C-X-C motif) receptor 4;microtubule-associated protein 7 503 64 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7065.[MT7]-LLAEK[MT7].2b4_1.heavy 431.286 / 571.357 3838.0 24.034900665283203 34 16 4 10 4 2.517282583331307 39.72537714365885 0.0 7 0.9607282832202446 6.207129270797653 3838.0 4.742130709574988 3.0 - - - - - - - 548.5714285714286 16 7 UBE4B;CCDC104;CSTF3;SASS6;AMPD3;LMNA;UPF0639;MAP7D1;CXCR4;MAP7 ubiquitination factor E4B (UFD2 homolog, yeast);coiled-coil domain containing 104;cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa;spindle assembly 6 homolog (C. elegans);adenosine monophosphate deaminase 3;lamin A/C;UPF0639 protein;MAP7 domain containing 1;chemokine (C-X-C motif) receptor 4;microtubule-associated protein 7 505 64 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7065.[MT7]-LLAEK[MT7].2y3_1.heavy 431.286 / 491.295 7676.0 24.034900665283203 34 16 4 10 4 2.517282583331307 39.72537714365885 0.0 7 0.9607282832202446 6.207129270797653 7676.0 12.9682421875 2.0 - - - - - - - 256.0 15 3 UBE4B;CCDC104;CSTF3;SASS6;AMPD3;LMNA;UPF0639;MAP7D1;CXCR4;MAP7 ubiquitination factor E4B (UFD2 homolog, yeast);coiled-coil domain containing 104;cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa;spindle assembly 6 homolog (C. elegans);adenosine monophosphate deaminase 3;lamin A/C;UPF0639 protein;MAP7 domain containing 1;chemokine (C-X-C motif) receptor 4;microtubule-associated protein 7 507 65 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7066.[MT7]-DSPLATR.2y4_1.heavy 452.254 / 460.288 1748.0 19.77239990234375 38 20 2 10 6 9.255127913276327 10.804820952993168 0.0 6 0.9960522768492699 19.635684669680884 1748.0 3.1999999999999997 11.0 - - - - - - - 315.8888888888889 59 9 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 509 65 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7066.[MT7]-DSPLATR.2y6_1.heavy 452.254 / 644.373 10052.0 19.77239990234375 38 20 2 10 6 9.255127913276327 10.804820952993168 0.0 6 0.9960522768492699 19.635684669680884 10052.0 29.327917620137303 1.0 - - - - - - - 328.0 20 8 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 511 65 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7066.[MT7]-DSPLATR.2b5_1.heavy 452.254 / 628.342 2404.0 19.77239990234375 38 20 2 10 6 9.255127913276327 10.804820952993168 0.0 6 0.9960522768492699 19.635684669680884 2404.0 1.026880244088482 1.0 - - - - - - - 780.5714285714286 4 7 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 513 65 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7066.[MT7]-DSPLATR.2b1_1.heavy 452.254 / 260.136 5026.0 19.77239990234375 38 20 2 10 6 9.255127913276327 10.804820952993168 0.0 6 0.9960522768492699 19.635684669680884 5026.0 20.357025171624713 3.0 - - - - - - - 300.75 21 8 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 515 66 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7061.[MT7]-IFSEENSDEIIK[MT7].2b8_1.heavy 856.453 / 1066.48 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 517 66 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7061.[MT7]-IFSEENSDEIIK[MT7].2y4_1.heavy 856.453 / 646.426 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 519 66 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7061.[MT7]-IFSEENSDEIIK[MT7].2b4_1.heavy 856.453 / 621.336 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 521 66 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7061.[MT7]-IFSEENSDEIIK[MT7].2y3_1.heavy 856.453 / 517.383 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 523 67 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7060.[MT7]-IFSEENSDEIIK[MT7].3y3_1.heavy 571.305 / 517.383 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 525 67 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7060.[MT7]-IFSEENSDEIIK[MT7].3b6_1.heavy 571.305 / 864.422 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 527 67 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7060.[MT7]-IFSEENSDEIIK[MT7].3b4_1.heavy 571.305 / 621.336 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 529 67 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7060.[MT7]-IFSEENSDEIIK[MT7].3b5_1.heavy 571.305 / 750.379 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 531 68 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7062.[MT7]-EVTC[CAM]LAWRPDGK[MT7].3y7_1.heavy 573.975 / 973.534 1695.0 28.194299697875977 34 18 2 10 4 7.762879540066855 12.88181782080555 0.0 7 0.9869165110284563 10.777696167203356 1695.0 9.215103305785124 1.0 - - - - - - - 302.5 3 4 ANAPC4 anaphase promoting complex subunit 4 533 68 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7062.[MT7]-EVTC[CAM]LAWRPDGK[MT7].3y10_2.heavy 573.975 / 674.352 2905.0 28.194299697875977 34 18 2 10 4 7.762879540066855 12.88181782080555 0.0 7 0.9869165110284563 10.777696167203356 2905.0 1.7206611570247934 9.0 - - - - - - - 242.0 33 5 ANAPC4 anaphase promoting complex subunit 4 535 68 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7062.[MT7]-EVTC[CAM]LAWRPDGK[MT7].3y11_2.heavy 573.975 / 723.886 4116.0 28.194299697875977 34 18 2 10 4 7.762879540066855 12.88181782080555 0.0 7 0.9869165110284563 10.777696167203356 4116.0 10.488429752066116 0.0 - - - - - - - 363.0 8 8 ANAPC4 anaphase promoting complex subunit 4 537 68 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7062.[MT7]-EVTC[CAM]LAWRPDGK[MT7].3y4_1.heavy 573.975 / 560.316 7747.0 28.194299697875977 34 18 2 10 4 7.762879540066855 12.88181782080555 0.0 7 0.9869165110284563 10.777696167203356 7747.0 13.495145656654135 0.0 - - - - - - - 295.77777777777777 15 9 ANAPC4 anaphase promoting complex subunit 4 539 69 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9843.[MT7]-RFLVTLR.3y3_1.heavy 350.23 / 389.251 17353.0 29.112799644470215 42 17 10 5 10 3.352818001588442 29.825657089834184 0.04559898376464844 3 0.9712223500603285 7.257510458428407 17353.0 101.5590322580645 0.0 - - - - - - - 325.5 34 4 CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 541 69 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9843.[MT7]-RFLVTLR.3y5_1.heavy 350.23 / 601.403 1518.0 29.112799644470215 42 17 10 5 10 3.352818001588442 29.825657089834184 0.04559898376464844 3 0.9712223500603285 7.257510458428407 1518.0 13.990783410138249 0.0 - - - - - - - 325.5 3 2 CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 543 69 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9843.[MT7]-RFLVTLR.3y4_1.heavy 350.23 / 488.319 4121.0 29.112799644470215 42 17 10 5 10 3.352818001588442 29.825657089834184 0.04559898376464844 3 0.9712223500603285 7.257510458428407 4121.0 23.358663594470045 1.0 - - - - - - - 310.0 8 7 CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 545 69 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9843.[MT7]-RFLVTLR.3b3_1.heavy 350.23 / 561.363 1952.0 29.112799644470215 42 17 10 5 10 3.352818001588442 29.825657089834184 0.04559898376464844 3 0.9712223500603285 7.257510458428407 1952.0 14.38363133640553 0.0 - - - - - - - 217.0 3 2 CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 547 70 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9841.[MT7]-C[CAM]LGPSAR.2b3_1.heavy 452.743 / 475.246 4060.0 18.010299682617188 44 18 10 10 6 4.330409122500585 23.092506313180685 0.0 5 0.9895860683567016 12.08307285384802 4060.0 8.745247176198738 2.0 - - - - - - - 791.0 11 7 CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 549 70 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9841.[MT7]-C[CAM]LGPSAR.2y5_1.heavy 452.743 / 487.262 12180.0 18.010299682617188 44 18 10 10 6 4.330409122500585 23.092506313180685 0.0 5 0.9895860683567016 12.08307285384802 12180.0 25.801355013550136 0.0 - - - - - - - 369.0 24 5 CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 551 70 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9841.[MT7]-C[CAM]LGPSAR.2y6_1.heavy 452.743 / 600.346 16979.0 18.010299682617188 44 18 10 10 6 4.330409122500585 23.092506313180685 0.0 5 0.9895860683567016 12.08307285384802 16979.0 31.152811695067417 0.0 - - - - - - - 761.375 33 8 CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 553 70 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9841.[MT7]-C[CAM]LGPSAR.2b5_1.heavy 452.743 / 659.33 3137.0 18.010299682617188 44 18 10 10 6 4.330409122500585 23.092506313180685 0.0 5 0.9895860683567016 12.08307285384802 3137.0 5.100813008130081 2.0 - - - - - - - 316.42857142857144 6 7 CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 555 71 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9840.[MT7]-HSHPTR.2b3_1.heavy 439.739 / 506.259 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 557 71 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9840.[MT7]-HSHPTR.2y4_1.heavy 439.739 / 510.278 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 559 71 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9840.[MT7]-HSHPTR.2y5_1.heavy 439.739 / 597.31 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 561 71 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9840.[MT7]-HSHPTR.2b5_1.heavy 439.739 / 704.36 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) 563 72 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9731.[MT7]-LQVEQEENR.2y8_1.heavy 644.834 / 1031.48 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC1 anaphase promoting complex subunit 1 565 72 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9731.[MT7]-LQVEQEENR.2y5_1.heavy 644.834 / 675.306 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC1 anaphase promoting complex subunit 1 567 72 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9731.[MT7]-LQVEQEENR.2y6_1.heavy 644.834 / 804.348 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC1 anaphase promoting complex subunit 1 569 72 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9731.[MT7]-LQVEQEENR.2y7_1.heavy 644.834 / 903.417 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC1 anaphase promoting complex subunit 1 571 73 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 OPPA_ECOLI.LAIAASSLWK.2y7.peptide 530.31 / 762.41 2230270.0 34.57870101928711 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 2230270.0 915.1173940989818 0.0 - - - - - - - 199.14285714285714 4460 7 573 73 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 OPPA_ECOLI.LAIAASSLWK.2y8.peptide 530.31 / 875.5 1220820.0 34.57870101928711 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 1220820.0 128.393051262809 0.0 - - - - - - - 190.0 2441 4 575 73 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 OPPA_ECOLI.LAIAASSLWK.2y6.peptide 530.31 / 691.38 1757900.0 34.57870101928711 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 1757900.0 93.6858517592595 0.0 - - - - - - - 199.14285714285714 3515 7 577 74 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9730.[MT7]-LVLEFFSSR.2y8_1.heavy 621.354 / 984.515 N/A N/A - - - - - - - - - 0.0 - - - - - - - LOC100134261;LOC100286979;ANAPC1 anaphase-promoting complex subunit 1-like;anaphase-promoting complex subunit 1-like;anaphase promoting complex subunit 1 579 74 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9730.[MT7]-LVLEFFSSR.2y5_1.heavy 621.354 / 643.32 N/A N/A - - - - - - - - - 0.0 - - - - - - - LOC100134261;LOC100286979;ANAPC1 anaphase-promoting complex subunit 1-like;anaphase-promoting complex subunit 1-like;anaphase promoting complex subunit 1 581 74 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9730.[MT7]-LVLEFFSSR.2y6_1.heavy 621.354 / 772.362 N/A N/A - - - - - - - - - 0.0 - - - - - - - LOC100134261;LOC100286979;ANAPC1 anaphase-promoting complex subunit 1-like;anaphase-promoting complex subunit 1-like;anaphase promoting complex subunit 1 583 74 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9730.[MT7]-LVLEFFSSR.2y7_1.heavy 621.354 / 885.446 N/A N/A - - - - - - - - - 0.0 - - - - - - - LOC100134261;LOC100286979;ANAPC1 anaphase-promoting complex subunit 1-like;anaphase-promoting complex subunit 1-like;anaphase promoting complex subunit 1 585 75 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9732.[MT7]-NFDFEGSLSPVIAPK[MT7].3b6_1.heavy 637.015 / 854.38 5124.0 35.880699157714844 46 16 10 10 10 3.0180385482593897 33.134102961565404 0.0 3 0.9622775159267448 6.334137178129548 5124.0 20.67982062780269 0.0 - - - - - - - 263.7368421052632 10 19 LOC100286979;ANAPC1 anaphase-promoting complex subunit 1-like;anaphase promoting complex subunit 1 587 75 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9732.[MT7]-NFDFEGSLSPVIAPK[MT7].3b4_1.heavy 637.015 / 668.316 7240.0 35.880699157714844 46 16 10 10 10 3.0180385482593897 33.134102961565404 0.0 3 0.9622775159267448 6.334137178129548 7240.0 1.8576010262989098 0.0 - - - - - - - 206.85714285714286 14 14 LOC100286979;ANAPC1 anaphase-promoting complex subunit 1-like;anaphase promoting complex subunit 1 589 75 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9732.[MT7]-NFDFEGSLSPVIAPK[MT7].3b3_1.heavy 637.015 / 521.248 9357.0 35.880699157714844 46 16 10 10 10 3.0180385482593897 33.134102961565404 0.0 3 0.9622775159267448 6.334137178129548 9357.0 23.109992136938242 0.0 - - - - - - - 769.6363636363636 18 11 LOC100286979;ANAPC1 anaphase-promoting complex subunit 1-like;anaphase promoting complex subunit 1 591 75 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9732.[MT7]-NFDFEGSLSPVIAPK[MT7].3b7_1.heavy 637.015 / 941.412 5235.0 35.880699157714844 46 16 10 10 10 3.0180385482593897 33.134102961565404 0.0 3 0.9622775159267448 6.334137178129548 5235.0 20.18878923766816 0.0 - - - - - - - 230.2 10 15 LOC100286979;ANAPC1 anaphase-promoting complex subunit 1-like;anaphase promoting complex subunit 1 593 76 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9826.[MT7]-SPTFFQK[MT7].2y4_1.heavy 571.826 / 713.41 5997.0 27.79509925842285 50 20 10 10 10 16.8647945006549 5.9295119188150665 0.0 3 0.9985214660285915 32.09173457447979 5997.0 7.0023352793994995 0.0 - - - - - - - 411.42857142857144 11 7 TRIM37 tripartite motif-containing 37 595 76 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9826.[MT7]-SPTFFQK[MT7].2y5_1.heavy 571.826 / 814.458 4557.0 27.79509925842285 50 20 10 10 10 16.8647945006549 5.9295119188150665 0.0 3 0.9985214660285915 32.09173457447979 4557.0 8.293108666944676 0.0 - - - - - - - 377.14285714285717 9 7 TRIM37 tripartite motif-containing 37 597 76 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9826.[MT7]-SPTFFQK[MT7].2y3_1.heavy 571.826 / 566.342 N/A 27.79509925842285 50 20 10 10 10 16.8647945006549 5.9295119188150665 0.0 3 0.9985214660285915 32.09173457447979 12713.0 2.231819179284617 1.0 - - - - - - - 360.0 35 2 TRIM37 tripartite motif-containing 37 599 76 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9826.[MT7]-SPTFFQK[MT7].2y6_1.heavy 571.826 / 911.511 19909.0 27.79509925842285 50 20 10 10 10 16.8647945006549 5.9295119188150665 0.0 3 0.9985214660285915 32.09173457447979 19909.0 98.31355611968307 0.0 - - - - - - - 308.57142857142856 39 7 TRIM37 tripartite motif-containing 37 601 77 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9829.[MT7]-EDEEDEEK[MT7].2b3_1.heavy 655.796 / 518.221 N/A N/A - - - - - - - - - 0.0 - - - - - - - TRIM37 tripartite motif-containing 37 603 77 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9829.[MT7]-EDEEDEEK[MT7].2y3_1.heavy 655.796 / 549.3 N/A N/A - - - - - - - - - 0.0 - - - - - - - TRIM37 tripartite motif-containing 37 605 77 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9829.[MT7]-EDEEDEEK[MT7].2b5_1.heavy 655.796 / 762.291 N/A N/A - - - - - - - - - 0.0 - - - - - - - TRIM37 tripartite motif-containing 37 607 77 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9829.[MT7]-EDEEDEEK[MT7].2y7_1.heavy 655.796 / 1037.44 N/A N/A - - - - - - - - - 0.0 - - - - - - - TRIM37 tripartite motif-containing 37 609 78 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9828.[MT7]-ERLTIELSR.3b6_2.heavy 420.918 / 443.759 12284.0 26.747299194335938 29 13 0 10 6 1.0473870563859329 62.03461848914051 0.0 5 0.9254322612958079 4.4910771567698395 12284.0 61.359475502246326 0.0 - - - - - - - 657.875 24 8 TRIM37 tripartite motif-containing 37 611 78 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9828.[MT7]-ERLTIELSR.3b6_1.heavy 420.918 / 886.511 N/A 26.747299194335938 29 13 0 10 6 1.0473870563859329 62.03461848914051 0.0 5 0.9254322612958079 4.4910771567698395 0.0 0.0 2.0 - - - - - - - 0.0 0 0 TRIM37 tripartite motif-containing 37 613 78 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9828.[MT7]-ERLTIELSR.3y4_1.heavy 420.918 / 504.278 15293.0 26.747299194335938 29 13 0 10 6 1.0473870563859329 62.03461848914051 0.0 5 0.9254322612958079 4.4910771567698395 15293.0 30.507737992647435 1.0 - - - - - - - 251.0 118 3 TRIM37 tripartite motif-containing 37 615 78 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9828.[MT7]-ERLTIELSR.3y5_1.heavy 420.918 / 617.362 3510.0 26.747299194335938 29 13 0 10 6 1.0473870563859329 62.03461848914051 0.0 5 0.9254322612958079 4.4910771567698395 3510.0 20.667999618293294 1.0 - - - - - - - 251.0 34 4 TRIM37 tripartite motif-containing 37 617 79 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9825.[MT7]-NTLSEIK[MT7].2y4_1.heavy 546.829 / 620.374 8707.0 23.900699615478516 34 20 0 10 4 6.20703367975153 16.11075517863197 0.0 8 0.9907089127882439 12.793585372090549 8707.0 14.880126953125 0.0 - - - - - - - 256.0 17 6 TRIM37 tripartite motif-containing 37 619 79 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9825.[MT7]-NTLSEIK[MT7].2y5_1.heavy 546.829 / 733.458 2305.0 23.900699615478516 34 20 0 10 4 6.20703367975153 16.11075517863197 0.0 8 0.9907089127882439 12.793585372090549 2305.0 1.60078125 1.0 - - - - - - - 256.0 4 5 TRIM37 tripartite motif-containing 37 621 79 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9825.[MT7]-NTLSEIK[MT7].2y6_1.heavy 546.829 / 834.505 5122.0 23.900699615478516 34 20 0 10 4 6.20703367975153 16.11075517863197 0.0 8 0.9907089127882439 12.793585372090549 5122.0 12.0046875 1.0 - - - - - - - 585.1428571428571 12 7 TRIM37 tripartite motif-containing 37 623 79 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9825.[MT7]-NTLSEIK[MT7].2b5_1.heavy 546.829 / 689.359 3841.0 23.900699615478516 34 20 0 10 4 6.20703367975153 16.11075517863197 0.0 8 0.9907089127882439 12.793585372090549 3841.0 11.878092447916666 5.0 - - - - - - - 640.0 66 8 TRIM37 tripartite motif-containing 37 625 80 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9824.[MT7]-AVDPGENSR.2y6_1.heavy 544.776 / 659.311 21961.0 15.539374828338623 44 20 10 6 8 9.238935180040897 10.823758155164082 0.03890037536621094 4 0.997522576591302 24.78977298244702 21961.0 121.0495289957567 0.0 - - - - - - - 252.33333333333334 43 9 TRIM37 tripartite motif-containing 37 627 80 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9824.[MT7]-AVDPGENSR.2y8_1.heavy 544.776 / 873.406 2019.0 15.539374828338623 44 20 10 6 8 9.238935180040897 10.823758155164082 0.03890037536621094 4 0.997522576591302 24.78977298244702 2019.0 18.026489760020105 1.0 - - - - - - - 168.16666666666666 4 6 TRIM37 tripartite motif-containing 37 629 80 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9824.[MT7]-AVDPGENSR.2y5_1.heavy 544.776 / 562.258 1010.0 15.539374828338623 44 20 10 6 8 9.238935180040897 10.823758155164082 0.03890037536621094 4 0.997522576591302 24.78977298244702 1010.0 6.011904761904762 5.0 - - - - - - - 224.33333333333334 7 9 TRIM37 tripartite motif-containing 37 631 80 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9824.[MT7]-AVDPGENSR.2y7_1.heavy 544.776 / 774.338 1893.0 15.539374828338623 44 20 10 6 8 9.238935180040897 10.823758155164082 0.03890037536621094 4 0.997522576591302 24.78977298244702 1893.0 6.378425271098539 2.0 - - - - - - - 226.8 4 5 TRIM37 tripartite motif-containing 37 633 81 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9830.[MT7]-QRADPVYSPPLQVSGLC[CAM]WR.3y6_1.heavy 791.747 / 778.367 N/A N/A - - - - - - - - - 0.0 - - - - - - - TRIM37 tripartite motif-containing 37 635 81 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9830.[MT7]-QRADPVYSPPLQVSGLC[CAM]WR.3b4_1.heavy 791.747 / 615.333 N/A N/A - - - - - - - - - 0.0 - - - - - - - TRIM37 tripartite motif-containing 37 637 81 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9830.[MT7]-QRADPVYSPPLQVSGLC[CAM]WR.3y8_1.heavy 791.747 / 1005.49 N/A N/A - - - - - - - - - 0.0 - - - - - - - TRIM37 tripartite motif-containing 37 639 81 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9830.[MT7]-QRADPVYSPPLQVSGLC[CAM]WR.3y10_1.heavy 791.747 / 1215.63 N/A N/A - - - - - - - - - 0.0 - - - - - - - TRIM37 tripartite motif-containing 37 641 82 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9831.[MT7]-ALIHGSIGDILPK[MT7].3b9_2.heavy 541.334 / 504.783 N/A N/A - - - - - - - - - 0.0 - - - - - - - TRIM37 tripartite motif-containing 37 643 82 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9831.[MT7]-ALIHGSIGDILPK[MT7].3b9_1.heavy 541.334 / 1008.56 N/A N/A - - - - - - - - - 0.0 - - - - - - - TRIM37 tripartite motif-containing 37 645 82 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9831.[MT7]-ALIHGSIGDILPK[MT7].3y6_1.heavy 541.334 / 786.484 N/A N/A - - - - - - - - - 0.0 - - - - - - - TRIM37 tripartite motif-containing 37 647 82 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9831.[MT7]-ALIHGSIGDILPK[MT7].3b4_1.heavy 541.334 / 579.373 N/A N/A - - - - - - - - - 0.0 - - - - - - - TRIM37 tripartite motif-containing 37 649 83 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9832.[MT7]-ADPVYSPPLQVSGLC[CAM]WR.3y7_1.heavy 697.027 / 877.435 2087.0 37.44020080566406 50 20 10 10 10 20.50935106845617 4.875824674618896 0.0 3 0.9981505694592805 28.693029271107495 2087.0 11.4687797260274 0.0 - - - - - - - 542.625 4 8 TRIM37 tripartite motif-containing 37 651 83 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9832.[MT7]-ADPVYSPPLQVSGLC[CAM]WR.3y6_1.heavy 697.027 / 778.367 3340.0 37.44020080566406 50 20 10 10 10 20.50935106845617 4.875824674618896 0.0 3 0.9981505694592805 28.693029271107495 3340.0 7.741007194244604 0.0 - - - - - - - 667.8571428571429 6 7 TRIM37 tripartite motif-containing 37 653 83 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9832.[MT7]-ADPVYSPPLQVSGLC[CAM]WR.3b4_1.heavy 697.027 / 527.295 3006.0 37.44020080566406 50 20 10 10 10 20.50935106845617 4.875824674618896 0.0 3 0.9981505694592805 28.693029271107495 3006.0 7.920338179231345 0.0 - - - - - - - 691.6428571428571 6 14 TRIM37 tripartite motif-containing 37 655 83 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9832.[MT7]-ADPVYSPPLQVSGLC[CAM]WR.3y8_1.heavy 697.027 / 1005.49 1336.0 37.44020080566406 50 20 10 10 10 20.50935106845617 4.875824674618896 0.0 3 0.9981505694592805 28.693029271107495 1336.0 0.8 3.0 - - - - - - - 166.69230769230768 4 13 TRIM37 tripartite motif-containing 37 657 84 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9725.[MT7]-VQDVR.2y4_1.heavy 380.725 / 517.273 N/A N/A - - - - - - - - - 0.0 - - - - - - - LOC100286979;ANAPC1;LOC730268 anaphase-promoting complex subunit 1-like;anaphase promoting complex subunit 1;anaphase-promoting complex subunit 1-like 659 84 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9725.[MT7]-VQDVR.2b3_1.heavy 380.725 / 487.263 N/A N/A - - - - - - - - - 0.0 - - - - - - - LOC100286979;ANAPC1;LOC730268 anaphase-promoting complex subunit 1-like;anaphase promoting complex subunit 1;anaphase-promoting complex subunit 1-like 661 84 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9725.[MT7]-VQDVR.2b4_1.heavy 380.725 / 586.332 N/A N/A - - - - - - - - - 0.0 - - - - - - - LOC100286979;ANAPC1;LOC730268 anaphase-promoting complex subunit 1-like;anaphase promoting complex subunit 1;anaphase-promoting complex subunit 1-like 663 84 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9725.[MT7]-VQDVR.2y3_1.heavy 380.725 / 389.214 N/A N/A - - - - - - - - - 0.0 - - - - - - - LOC100286979;ANAPC1;LOC730268 anaphase-promoting complex subunit 1-like;anaphase promoting complex subunit 1;anaphase-promoting complex subunit 1-like 665 85 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9726.[MT7]-LNLTGR.2b3_1.heavy 409.254 / 485.32 N/A N/A - - - - - - - - - 0.0 - - - - - - - LOC100286979;ANAPC1;LOC730268 anaphase-promoting complex subunit 1-like;anaphase promoting complex subunit 1;anaphase-promoting complex subunit 1-like 667 85 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9726.[MT7]-LNLTGR.2y4_1.heavy 409.254 / 446.272 N/A N/A - - - - - - - - - 0.0 - - - - - - - LOC100286979;ANAPC1;LOC730268 anaphase-promoting complex subunit 1-like;anaphase promoting complex subunit 1;anaphase-promoting complex subunit 1-like 669 85 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9726.[MT7]-LNLTGR.2y5_1.heavy 409.254 / 560.315 N/A N/A - - - - - - - - - 0.0 - - - - - - - LOC100286979;ANAPC1;LOC730268 anaphase-promoting complex subunit 1-like;anaphase promoting complex subunit 1;anaphase-promoting complex subunit 1-like 671 85 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9726.[MT7]-LNLTGR.2b5_1.heavy 409.254 / 643.39 N/A N/A - - - - - - - - - 0.0 - - - - - - - LOC100286979;ANAPC1;LOC730268 anaphase-promoting complex subunit 1-like;anaphase promoting complex subunit 1;anaphase-promoting complex subunit 1-like 673 86 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9729.[MT7]-LLQLC[CAM]QR.2y4_1.heavy 537.814 / 576.292 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC1;LOC730268 anaphase promoting complex subunit 1;anaphase-promoting complex subunit 1-like 675 86 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9729.[MT7]-LLQLC[CAM]QR.2y5_1.heavy 537.814 / 704.351 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC1;LOC730268 anaphase promoting complex subunit 1;anaphase-promoting complex subunit 1-like 677 86 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9729.[MT7]-LLQLC[CAM]QR.2b4_1.heavy 537.814 / 612.42 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC1;LOC730268 anaphase promoting complex subunit 1;anaphase-promoting complex subunit 1-like 679 86 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9729.[MT7]-LLQLC[CAM]QR.2y6_1.heavy 537.814 / 817.435 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC1;LOC730268 anaphase promoting complex subunit 1;anaphase-promoting complex subunit 1-like 681 87 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9722.[MT7]-QILC[CAM]QFIDR.2y6_1.heavy 668.862 / 838.388 5570.0 34.640825271606445 43 17 10 6 10 3.215618454660807 25.226046247581532 0.03549957275390625 3 0.9794767103907394 8.599898186390087 5570.0 35.601312929310495 2.0 - - - - - - - 299.7368421052632 11 19 ATR ataxia telangiectasia and Rad3 related 683 87 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9722.[MT7]-QILC[CAM]QFIDR.2y4_1.heavy 668.862 / 550.298 1733.0 34.640825271606445 43 17 10 6 10 3.215618454660807 25.226046247581532 0.03549957275390625 3 0.9794767103907394 8.599898186390087 1733.0 2.099192462987887 5.0 - - - - - - - 300.7857142857143 3 14 ATR ataxia telangiectasia and Rad3 related 685 87 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9722.[MT7]-QILC[CAM]QFIDR.2y8_1.heavy 668.862 / 1064.56 6065.0 34.640825271606445 43 17 10 6 10 3.215618454660807 25.226046247581532 0.03549957275390625 3 0.9794767103907394 8.599898186390087 6065.0 67.49758064516129 0.0 - - - - - - - 270.9375 12 16 ATR ataxia telangiectasia and Rad3 related 687 87 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9722.[MT7]-QILC[CAM]QFIDR.2y7_1.heavy 668.862 / 951.472 8169.0 34.640825271606445 43 17 10 6 10 3.215618454660807 25.226046247581532 0.03549957275390625 3 0.9794767103907394 8.599898186390087 8169.0 21.115347334410338 0.0 - - - - - - - 742.7142857142857 16 7 ATR ataxia telangiectasia and Rad3 related 689 88 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9721.[MT7]-LYEEPLSK[MT7].2b3_1.heavy 633.863 / 550.299 N/A N/A - - - - - - - - - 0.0 - - - - - - - ATR;LOC651921 ataxia telangiectasia and Rad3 related;serine/threonine-protein kinase ATR-like 691 88 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9721.[MT7]-LYEEPLSK[MT7].2y4_1.heavy 633.863 / 588.384 N/A N/A - - - - - - - - - 0.0 - - - - - - - ATR;LOC651921 ataxia telangiectasia and Rad3 related;serine/threonine-protein kinase ATR-like 693 88 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9721.[MT7]-LYEEPLSK[MT7].2b4_1.heavy 633.863 / 679.342 N/A N/A - - - - - - - - - 0.0 - - - - - - - ATR;LOC651921 ataxia telangiectasia and Rad3 related;serine/threonine-protein kinase ATR-like 695 88 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9721.[MT7]-LYEEPLSK[MT7].2y7_1.heavy 633.863 / 1009.53 N/A N/A - - - - - - - - - 0.0 - - - - - - - ATR;LOC651921 ataxia telangiectasia and Rad3 related;serine/threonine-protein kinase ATR-like 697 89 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9819.[MT7]-VPSDLK[MT7].2y4_1.heavy 473.794 / 606.358 7922.0 22.07146644592285 16 11 0 5 0 1.6998170567570956 58.82986030907327 0.04070091247558594 32 0.8509305010018094 3.1558703767265848 7922.0 6.854200526128028 1.0 - - - - - - - 357.77777777777777 33 9 TRIM37 tripartite motif-containing 37 699 89 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9819.[MT7]-VPSDLK[MT7].2y5_1.heavy 473.794 / 703.411 9160.0 22.07146644592285 16 11 0 5 0 1.6998170567570956 58.82986030907327 0.04070091247558594 32 0.8509305010018094 3.1558703767265848 9160.0 18.831356741947214 3.0 - - - - - - - 433.25 63 4 TRIM37 tripartite motif-containing 37 701 89 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9819.[MT7]-VPSDLK[MT7].2b4_1.heavy 473.794 / 543.289 N/A 22.07146644592285 16 11 0 5 0 1.6998170567570956 58.82986030907327 0.04070091247558594 32 0.8509305010018094 3.1558703767265848 3466.0 0.0 6.0 - - - - - - - 396.2 18 5 TRIM37 tripartite motif-containing 37 703 89 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9819.[MT7]-VPSDLK[MT7].2y3_1.heavy 473.794 / 519.326 990.0 22.07146644592285 16 11 0 5 0 1.6998170567570956 58.82986030907327 0.04070091247558594 32 0.8509305010018094 3.1558703767265848 990.0 0.850475763016158 35.0 - - - - - - - 778.2857142857143 11 7 TRIM37 tripartite motif-containing 37 705 90 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9817.[MT7]-SFLAVC[CAM]QQC[CAM]LSNVNTPVK[MT7].3b6_1.heavy 785.08 / 822.43 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1 stromal antigen 1 707 90 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9817.[MT7]-SFLAVC[CAM]QQC[CAM]LSNVNTPVK[MT7].3b4_1.heavy 785.08 / 563.331 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1 stromal antigen 1 709 90 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9817.[MT7]-SFLAVC[CAM]QQC[CAM]LSNVNTPVK[MT7].3b5_1.heavy 785.08 / 662.399 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1 stromal antigen 1 711 90 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9817.[MT7]-SFLAVC[CAM]QQC[CAM]LSNVNTPVK[MT7].3y8_1.heavy 785.08 / 1002.57 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1 stromal antigen 1 713 91 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9816.[MT7]-RFALTFGLDQIK[MT7].3y6_1.heavy 566.338 / 817.49 2108.0 36.485801696777344 47 17 10 10 10 4.745611756312 21.072098843103404 0.0 3 0.9788657857742338 8.47425373448811 2108.0 13.948457711442785 0.0 - - - - - - - 145.9090909090909 4 11 STAG1 stromal antigen 1 715 91 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9816.[MT7]-RFALTFGLDQIK[MT7].3b4_1.heavy 566.338 / 632.4 2309.0 36.485801696777344 47 17 10 10 10 4.745611756312 21.072098843103404 0.0 3 0.9788657857742338 8.47425373448811 2309.0 5.2573744228578985 1.0 - - - - - - - 647.9090909090909 4 11 STAG1 stromal antigen 1 717 91 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9816.[MT7]-RFALTFGLDQIK[MT7].3b5_1.heavy 566.338 / 733.448 1907.0 36.485801696777344 47 17 10 10 10 4.745611756312 21.072098843103404 0.0 3 0.9788657857742338 8.47425373448811 1907.0 9.374339585180872 0.0 - - - - - - - 602.2857142857143 3 7 STAG1 stromal antigen 1 719 91 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9816.[MT7]-RFALTFGLDQIK[MT7].3b7_1.heavy 566.338 / 937.538 4316.0 36.485801696777344 47 17 10 10 10 4.745611756312 21.072098843103404 0.0 3 0.9788657857742338 8.47425373448811 4316.0 15.035814532711633 0.0 - - - - - - - 245.22222222222223 8 9 STAG1 stromal antigen 1 721 92 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9815.[MT7]-REDVWLPLISYR.3y6_1.heavy 564.318 / 748.435 11813.0 39.37619972229004 35 14 10 3 8 2.703629988462472 28.419164733110428 0.06719970703125 4 0.9371692011781255 4.897511904111154 11813.0 186.2237396660723 0.0 - - - - - - - 195.0 23 15 STAG1 stromal antigen 1 723 92 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9815.[MT7]-REDVWLPLISYR.3b5_1.heavy 564.318 / 830.428 3419.0 39.37619972229004 35 14 10 3 8 2.703629988462472 28.419164733110428 0.06719970703125 4 0.9371692011781255 4.897511904111154 3419.0 6.287816091954023 1.0 - - - - - - - 180.0 8 19 STAG1 stromal antigen 1 725 92 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9815.[MT7]-REDVWLPLISYR.3y4_1.heavy 564.318 / 538.298 4974.0 39.37619972229004 35 14 10 3 8 2.703629988462472 28.419164733110428 0.06719970703125 4 0.9371692011781255 4.897511904111154 4974.0 15.032261083743842 0.0 - - - - - - - 248.78571428571428 9 14 STAG1 stromal antigen 1 727 92 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9815.[MT7]-REDVWLPLISYR.3b3_1.heavy 564.318 / 545.28 2736.0 39.37619972229004 35 14 10 3 8 2.703629988462472 28.419164733110428 0.06719970703125 4 0.9371692011781255 4.897511904111154 2736.0 8.89363344051447 0.0 - - - - - - - 251.66666666666666 5 21 STAG1 stromal antigen 1 729 93 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9814.[MT7]-HVESDVLEAC[CAM]SK[MT7].3b6_1.heavy 554.618 / 811.407 1977.0 22.52775001525879 35 10 10 5 10 0.7962002810421188 62.98972133982763 0.04019927978515625 3 0.8414289265366967 3.057292414838097 1977.0 7.6038461538461535 0.0 - - - - - - - 247.0 3 4 STAG1 stromal antigen 1 731 93 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9814.[MT7]-HVESDVLEAC[CAM]SK[MT7].3y3_1.heavy 554.618 / 538.278 4695.0 22.52775001525879 35 10 10 5 10 0.7962002810421188 62.98972133982763 0.04019927978515625 3 0.8414289265366967 3.057292414838097 4695.0 4.435222672064778 0.0 - - - - - - - 336.8181818181818 9 11 STAG1 stromal antigen 1 733 93 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9814.[MT7]-HVESDVLEAC[CAM]SK[MT7].3b5_1.heavy 554.618 / 712.338 3707.0 22.52775001525879 35 10 10 5 10 0.7962002810421188 62.98972133982763 0.04019927978515625 3 0.8414289265366967 3.057292414838097 3707.0 2.801619433198381 1.0 - - - - - - - 317.57142857142856 7 7 STAG1 stromal antigen 1 735 93 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9814.[MT7]-HVESDVLEAC[CAM]SK[MT7].3y4_1.heavy 554.618 / 609.315 4695.0 22.52775001525879 35 10 10 5 10 0.7962002810421188 62.98972133982763 0.04019927978515625 3 0.8414289265366967 3.057292414838097 4695.0 8.078441295546558 0.0 - - - - - - - 370.5 9 10 STAG1 stromal antigen 1 737 94 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9813.[MT7]-RGRPGRPPSTNK[MT7].4y4_1.heavy 403.491 / 593.338 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1 stromal antigen 1 739 94 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9813.[MT7]-RGRPGRPPSTNK[MT7].4y9_2.heavy 403.491 / 549.313 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1 stromal antigen 1 741 94 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9813.[MT7]-RGRPGRPPSTNK[MT7].4y2_1.heavy 403.491 / 405.258 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1 stromal antigen 1 743 94 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9813.[MT7]-RGRPGRPPSTNK[MT7].4y3_1.heavy 403.491 / 506.306 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1 stromal antigen 1 745 95 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9812.[MT7]-SNFC[CAM]EFIGVLIR.2b5_1.heavy 799.928 / 782.326 1225.0 45.0015754699707 30 7 10 3 10 0.7750381253115556 68.50447377211148 0.06610107421875 3 0.7480850319607355 2.4052782555943133 1225.0 1.2316939890710383 1.0 - - - - - - - 314.56 2 25 STAG1 stromal antigen 1 747 95 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9812.[MT7]-SNFC[CAM]EFIGVLIR.2y5_1.heavy 799.928 / 557.377 3876.0 45.0015754699707 30 7 10 3 10 0.7750381253115556 68.50447377211148 0.06610107421875 3 0.7480850319607355 2.4052782555943133 3876.0 14.16608330086336 0.0 - - - - - - - 321.1904761904762 7 21 STAG1 stromal antigen 1 749 95 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9812.[MT7]-SNFC[CAM]EFIGVLIR.2y9_1.heavy 799.928 / 1106.6 1101.0 45.0015754699707 30 7 10 3 10 0.7750381253115556 68.50447377211148 0.06610107421875 3 0.7480850319607355 2.4052782555943133 1101.0 10.72234012450481 0.0 - - - - - - - 104.82142857142857 2 28 STAG1 stromal antigen 1 751 95 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9812.[MT7]-SNFC[CAM]EFIGVLIR.2y7_1.heavy 799.928 / 817.529 1318.0 45.0015754699707 30 7 10 3 10 0.7750381253115556 68.50447377211148 0.06610107421875 3 0.7480850319607355 2.4052782555943133 1318.0 9.389261031366294 0.0 - - - - - - - 204.62962962962962 2 27 STAG1 stromal antigen 1 753 96 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9811.[MT7]-FALTFGLDQIK[MT7].3b6_1.heavy 514.304 / 781.437 3182.0 40.1769495010376 39 13 10 6 10 1.3782347256373677 48.45114047271912 0.032199859619140625 3 0.9259026677234916 4.505491970230119 3182.0 57.35456790123456 0.0 - - - - - - - 135.0 6 12 STAG1 stromal antigen 1 755 96 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9811.[MT7]-FALTFGLDQIK[MT7].3b4_1.heavy 514.304 / 577.347 3020.0 40.1769495010376 39 13 10 6 10 1.3782347256373677 48.45114047271912 0.032199859619140625 3 0.9259026677234916 4.505491970230119 3020.0 37.28395061728395 0.0 - - - - - - - 92.11764705882354 6 17 STAG1 stromal antigen 1 757 96 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9811.[MT7]-FALTFGLDQIK[MT7].3y4_1.heavy 514.304 / 647.385 3775.0 40.1769495010376 39 13 10 6 10 1.3782347256373677 48.45114047271912 0.032199859619140625 3 0.9259026677234916 4.505491970230119 3775.0 46.488425925925924 0.0 - - - - - - - 90.94736842105263 7 19 STAG1 stromal antigen 1 759 96 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9811.[MT7]-FALTFGLDQIK[MT7].3y8_2.heavy 514.304 / 533.307 863.0 40.1769495010376 39 13 10 6 10 1.3782347256373677 48.45114047271912 0.032199859619140625 3 0.9259026677234916 4.505491970230119 863.0 6.712222222222222 1.0 - - - - - - - 0.0 1 0 STAG1 stromal antigen 1 761 97 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9820.[MT7]-SELISK[MT7].2y4_1.heavy 482.799 / 604.415 8316.0 21.997000694274902 44 20 9 5 10 6.138300807283578 16.29115338911741 0.04039955139160156 3 0.9950525234747736 17.53845290301401 8316.0 38.03079797586609 0.0 - - - - - - - 367.0 16 10 LOC389217;TRIM37 protein SET-like;tripartite motif-containing 37 763 97 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9820.[MT7]-SELISK[MT7].2y5_1.heavy 482.799 / 733.458 4892.0 21.997000694274902 44 20 9 5 10 6.138300807283578 16.29115338911741 0.04039955139160156 3 0.9950525234747736 17.53845290301401 4892.0 25.1776403322065 1.0 - - - - - - - 310.06666666666666 24 15 LOC389217;TRIM37 protein SET-like;tripartite motif-containing 37 765 97 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9820.[MT7]-SELISK[MT7].2b4_1.heavy 482.799 / 587.352 5381.0 21.997000694274902 44 20 9 5 10 6.138300807283578 16.29115338911741 0.04039955139160156 3 0.9950525234747736 17.53845290301401 5381.0 21.972248236718 0.0 - - - - - - - 353.44444444444446 10 9 LOC389217;TRIM37 protein SET-like;tripartite motif-containing 37 767 97 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9820.[MT7]-SELISK[MT7].2y3_1.heavy 482.799 / 491.331 10762.0 21.997000694274902 44 20 9 5 10 6.138300807283578 16.29115338911741 0.04039955139160156 3 0.9950525234747736 17.53845290301401 10762.0 9.195545804711353 0.0 - - - - - - - 326.3333333333333 21 6 LOC389217;TRIM37 protein SET-like;tripartite motif-containing 37 769 98 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9821.[MT7]-LTIELSR.2y4_1.heavy 488.301 / 504.278 N/A N/A - - - - - - - - - 0.0 - - - - - - - TRIM37 tripartite motif-containing 37 771 98 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9821.[MT7]-LTIELSR.2y5_1.heavy 488.301 / 617.362 N/A N/A - - - - - - - - - 0.0 - - - - - - - TRIM37 tripartite motif-containing 37 773 98 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9821.[MT7]-LTIELSR.2b4_1.heavy 488.301 / 601.368 N/A N/A - - - - - - - - - 0.0 - - - - - - - TRIM37 tripartite motif-containing 37 775 98 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9821.[MT7]-LTIELSR.2y6_1.heavy 488.301 / 718.409 N/A N/A - - - - - - - - - 0.0 - - - - - - - TRIM37 tripartite motif-containing 37 777 99 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 EFTU1_ECO24.FESEVYILSK.2y8.peptide 607.82 / 938.52 3220660.0 31.71500015258789 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 3220660.0 111.73300922651512 0.0 - - - - - - - 24512.0 6441 1 779 99 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 EFTU1_ECO24.FESEVYILSK.2y6.peptide 607.82 / 722.44 901532.0 31.71500015258789 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 901532.0 97.96040346486905 0.0 - - - - - - - 6264.0 1803 2 781 99 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 EFTU1_ECO24.FESEVYILSK.2y5.peptide 607.82 / 623.38 1223560.0 31.71500015258789 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 1223560.0 83.28500811511145 0.0 - - - - - - - 10531.0 2447 1 783 100 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9809.[MT7]-LELFTNRFK[MT7].3y6_1.heavy 485.957 / 956.543 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1 stromal antigen 1 785 100 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9809.[MT7]-LELFTNRFK[MT7].3b3_1.heavy 485.957 / 500.32 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1 stromal antigen 1 787 100 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9809.[MT7]-LELFTNRFK[MT7].3y8_2.heavy 485.957 / 599.839 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1 stromal antigen 1 789 100 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9809.[MT7]-LELFTNRFK[MT7].3y5_1.heavy 485.957 / 809.475 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1 stromal antigen 1 791 101 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9753.[MT7]-TEEAAITK[MT7].2b3_1.heavy 575.831 / 504.242 5595.0 19.552799224853516 40 18 6 10 6 3.6151863471733705 27.661091406308188 0.0 5 0.9810652049244035 8.954563090988849 5595.0 20.588987688098495 4.0 - - - - - - - 334.44444444444446 11 9 CCNB3 cyclin B3 793 101 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9753.[MT7]-TEEAAITK[MT7].2y5_1.heavy 575.831 / 647.421 5595.0 19.552799224853516 40 18 6 10 6 3.6151863471733705 27.661091406308188 0.0 5 0.9810652049244035 8.954563090988849 5595.0 31.227906976744187 3.0 - - - - - - - 276.42857142857144 12 7 CCNB3 cyclin B3 795 101 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9753.[MT7]-TEEAAITK[MT7].2b4_1.heavy 575.831 / 575.279 N/A 19.552799224853516 40 18 6 10 6 3.6151863471733705 27.661091406308188 0.0 5 0.9810652049244035 8.954563090988849 46049.0 7.588857009311744 2.0 - - - - - - - 5595.0 151 1 CCNB3 cyclin B3 797 101 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9753.[MT7]-TEEAAITK[MT7].2b5_1.heavy 575.831 / 646.316 6025.0 19.552799224853516 40 18 6 10 6 3.6151863471733705 27.661091406308188 0.0 5 0.9810652049244035 8.954563090988849 6025.0 9.867505148763648 0.0 - - - - - - - 337.85714285714283 12 7 CCNB3 cyclin B3 799 102 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9808.[MT7]-TREAVATLHK[MT7].4b7_1.heavy 354.216 / 873.491 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1 stromal antigen 1 801 102 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9808.[MT7]-TREAVATLHK[MT7].4y2_1.heavy 354.216 / 428.274 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1 stromal antigen 1 803 102 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9808.[MT7]-TREAVATLHK[MT7].4b5_1.heavy 354.216 / 701.406 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1 stromal antigen 1 805 102 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9808.[MT7]-TREAVATLHK[MT7].4b6_1.heavy 354.216 / 772.443 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1 stromal antigen 1 807 103 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9752.[MT7]-K[MT7]PLILK[MT7].3y3_1.heavy 381.944 / 517.383 15083.0 24.417600631713867 47 17 10 10 10 4.937823620630108 20.251837182317004 0.0 3 0.9777636831097916 8.260814734885589 15083.0 111.38215384615386 0.0 - - - - - - - 260.0 30 3 CCNB3 cyclin B3 809 103 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9752.[MT7]-K[MT7]PLILK[MT7].3y4_1.heavy 381.944 / 630.467 3641.0 24.417600631713867 47 17 10 10 10 4.937823620630108 20.251837182317004 0.0 3 0.9777636831097916 8.260814734885589 3641.0 13.408682692307693 0.0 - - - - - - - 260.0 7 3 CCNB3 cyclin B3 811 103 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9752.[MT7]-K[MT7]PLILK[MT7].3y5_1.heavy 381.944 / 727.52 7021.0 24.417600631713867 47 17 10 10 10 4.937823620630108 20.251837182317004 0.0 3 0.9777636831097916 8.260814734885589 7021.0 35.09149807692308 0.0 - - - - - - - 260.0 14 3 CCNB3 cyclin B3 813 103 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9752.[MT7]-K[MT7]PLILK[MT7].3y2_1.heavy 381.944 / 404.299 N/A 24.417600631713867 47 17 10 10 10 4.937823620630108 20.251837182317004 0.0 3 0.9777636831097916 8.260814734885589 17163.0 22.487930769230772 0.0 - - - - - - - 260.0 34 4 CCNB3 cyclin B3 815 104 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9755.[MT7]-ESLAIQEK[MT7].2y4_1.heavy 603.353 / 661.4 3285.0 24.795299530029297 40 14 8 10 8 1.6198985112383149 40.72110817232129 0.0 4 0.9359048374324606 4.848443196513686 3285.0 3.57552362463265 2.0 - - - - - - - 253.0 12 6 CCNB3 cyclin B3 817 104 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9755.[MT7]-ESLAIQEK[MT7].2y5_1.heavy 603.353 / 732.437 N/A 24.795299530029297 40 14 8 10 8 1.6198985112383149 40.72110817232129 0.0 4 0.9359048374324606 4.848443196513686 505.0 0.26635896954085536 43.0 - - - - - - - 253.0 11 3 CCNB3 cyclin B3 819 104 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9755.[MT7]-ESLAIQEK[MT7].2b4_1.heavy 603.353 / 545.305 4295.0 24.795299530029297 40 14 8 10 8 1.6198985112383149 40.72110817232129 0.0 4 0.9359048374324606 4.848443196513686 4295.0 5.608555958675256 3.0 - - - - - - - 645.5555555555555 8 9 CCNB3 cyclin B3 821 104 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9755.[MT7]-ESLAIQEK[MT7].2y7_1.heavy 603.353 / 932.553 4548.0 24.795299530029297 40 14 8 10 8 1.6198985112383149 40.72110817232129 0.0 4 0.9359048374324606 4.848443196513686 4548.0 3.907834934991521 0.0 - - - - - - - 253.0 9 3 CCNB3 cyclin B3 823 105 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9754.[MT7]-TSLSLQEK[MT7].2y4_1.heavy 597.353 / 661.4 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 825 105 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9754.[MT7]-TSLSLQEK[MT7].2y5_1.heavy 597.353 / 748.432 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 827 105 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9754.[MT7]-TSLSLQEK[MT7].2y3_1.heavy 597.353 / 548.316 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 829 105 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9754.[MT7]-TSLSLQEK[MT7].2y7_1.heavy 597.353 / 948.548 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 831 106 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9751.[MT7]-K[MT7]PTTEK[MT7].3y3_1.heavy 379.24 / 521.305 4864.0 14.010700225830078 40 20 0 10 10 10.552554304596935 9.47637862014486 0.0 3 0.9977475725447574 25.99892623423763 4864.0 35.49666666666667 1.0 - - - - - - - 182.85714285714286 9 14 CCNB3 cyclin B3 833 106 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9751.[MT7]-K[MT7]PTTEK[MT7].3y4_1.heavy 379.24 / 622.353 3755.0 14.010700225830078 40 20 0 10 10 10.552554304596935 9.47637862014486 0.0 3 0.9977475725447574 25.99892623423763 3755.0 39.681320949432404 0.0 - - - - - - - 135.47058823529412 7 17 CCNB3 cyclin B3 835 106 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9751.[MT7]-K[MT7]PTTEK[MT7].3y1_1.heavy 379.24 / 291.215 N/A 14.010700225830078 40 20 0 10 10 10.552554304596935 9.47637862014486 0.0 3 0.9977475725447574 25.99892623423763 6827.0 2.263188152645282 25.0 - - - - - - - 1280.0 66 7 CCNB3 cyclin B3 837 106 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9751.[MT7]-K[MT7]PTTEK[MT7].3y5_1.heavy 379.24 / 719.406 6657.0 14.010700225830078 40 20 0 10 10 10.552554304596935 9.47637862014486 0.0 3 0.9977475725447574 25.99892623423763 6657.0 87.62416511867906 0.0 - - - - - - - 197.3125 13 16 CCNB3 cyclin B3 839 107 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9750.[MT7]-K[MT7]PLVLK[MT7].3y3_1.heavy 377.273 / 503.367 9094.0 22.979999542236328 43 18 9 10 6 4.834042631043708 20.68661938515201 0.0 5 0.9842410790074364 9.818092994867898 9094.0 45.31162994560326 0.0 - - - - - - - 253.0 18 4 CCNB3 cyclin B3 841 107 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9750.[MT7]-K[MT7]PLVLK[MT7].3y4_1.heavy 377.273 / 616.451 2779.0 22.979999542236328 43 18 9 10 6 4.834042631043708 20.68661938515201 0.0 5 0.9842410790074364 9.818092994867898 2779.0 12.160280538550586 3.0 - - - - - - - 253.0 14 5 CCNB3 cyclin B3 843 107 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9750.[MT7]-K[MT7]PLVLK[MT7].3y5_1.heavy 377.273 / 713.504 5305.0 22.979999542236328 43 18 9 10 6 4.834042631043708 20.68661938515201 0.0 5 0.9842410790074364 9.818092994867898 5305.0 18.88399796501389 2.0 - - - - - - - 253.0 13 4 CCNB3 cyclin B3 845 107 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9750.[MT7]-K[MT7]PLVLK[MT7].3y2_1.heavy 377.273 / 404.299 9599.0 22.979999542236328 43 18 9 10 6 4.834042631043708 20.68661938515201 0.0 5 0.9842410790074364 9.818092994867898 9599.0 17.233045527830694 3.0 - - - - - - - 599.875 23 8 CCNB3 cyclin B3 847 108 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9801.[MT7]-YRDAIAEIR.3y6_1.heavy 417.571 / 672.404 6258.0 25.4717755317688 27 8 6 5 8 0.7040771146522917 77.74122874162063 0.04250144958496094 4 0.7980279760043334 2.698487113210801 6258.0 31.07301034703378 0.0 - - - - - - - 261.0 12 6 STAG1;STAG2 stromal antigen 1;stromal antigen 2 849 108 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9801.[MT7]-YRDAIAEIR.3b4_1.heavy 417.571 / 650.338 1564.0 25.4717755317688 27 8 6 5 8 0.7040771146522917 77.74122874162063 0.04250144958496094 4 0.7980279760043334 2.698487113210801 1564.0 6.733869731800766 3.0 - - - - - - - 707.4285714285714 6 7 STAG1;STAG2 stromal antigen 1;stromal antigen 2 851 108 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9801.[MT7]-YRDAIAEIR.3y4_1.heavy 417.571 / 488.283 8083.0 25.4717755317688 27 8 6 5 8 0.7040771146522917 77.74122874162063 0.04250144958496094 4 0.7980279760043334 2.698487113210801 8083.0 39.04872268919923 1.0 - - - - - - - 261.0 44 4 STAG1;STAG2 stromal antigen 1;stromal antigen 2 853 108 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9801.[MT7]-YRDAIAEIR.3b7_2.heavy 417.571 / 482.254 14862.0 25.4717755317688 27 8 6 5 8 0.7040771146522917 77.74122874162063 0.04250144958496094 4 0.7980279760043334 2.698487113210801 14862.0 25.46685421994885 0.0 - - - - - - - 595.5714285714286 29 7 STAG1;STAG2 stromal antigen 1;stromal antigen 2 855 109 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9800.[MT7]-DGIEFAFK[MT7].2y4_1.heavy 607.837 / 656.389 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1;STAG2 stromal antigen 1;stromal antigen 2 857 109 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9800.[MT7]-DGIEFAFK[MT7].2y5_1.heavy 607.837 / 785.431 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1;STAG2 stromal antigen 1;stromal antigen 2 859 109 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9800.[MT7]-DGIEFAFK[MT7].2b4_1.heavy 607.837 / 559.284 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1;STAG2 stromal antigen 1;stromal antigen 2 861 109 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9800.[MT7]-DGIEFAFK[MT7].2y3_1.heavy 607.837 / 509.32 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1;STAG2 stromal antigen 1;stromal antigen 2 863 110 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9803.[MT7]-QAAEAHPPVGR.3b4_1.heavy 426.234 / 544.285 3637.0 16.275150299072266 36 17 4 5 10 4.115565109458004 24.297999749825227 0.043701171875 3 0.9751351222640641 7.810254490714231 3637.0 12.805688943388514 2.0 - - - - - - - 242.66666666666666 31 15 STAG1 stromal antigen 1 865 110 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9803.[MT7]-QAAEAHPPVGR.3b5_1.heavy 426.234 / 615.322 5176.0 16.275150299072266 36 17 4 5 10 4.115565109458004 24.297999749825227 0.043701171875 3 0.9751351222640641 7.810254490714231 5176.0 15.722906601267116 0.0 - - - - - - - 192.5 10 8 STAG1 stromal antigen 1 867 110 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9803.[MT7]-QAAEAHPPVGR.3y4_1.heavy 426.234 / 428.262 5456.0 16.275150299072266 36 17 4 5 10 4.115565109458004 24.297999749825227 0.043701171875 3 0.9751351222640641 7.810254490714231 5456.0 7.802542646461568 1.0 - - - - - - - 664.625 10 8 STAG1 stromal antigen 1 869 110 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9803.[MT7]-QAAEAHPPVGR.3y5_1.heavy 426.234 / 525.314 8814.0 16.275150299072266 36 17 4 5 10 4.115565109458004 24.297999749825227 0.043701171875 3 0.9751351222640641 7.810254490714231 8814.0 28.22263335377069 0.0 - - - - - - - 305.45454545454544 17 11 STAG1 stromal antigen 1 871 111 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9802.[MT7]-TVHSYLEK[MT7].3y3_1.heavy 422.243 / 533.341 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1 stromal antigen 1 873 111 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9802.[MT7]-TVHSYLEK[MT7].3b4_1.heavy 422.243 / 569.316 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1 stromal antigen 1 875 111 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9802.[MT7]-TVHSYLEK[MT7].3y4_1.heavy 422.243 / 696.405 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1 stromal antigen 1 877 111 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9802.[MT7]-TVHSYLEK[MT7].3b3_1.heavy 422.243 / 482.284 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1 stromal antigen 1 879 112 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9805.[MT7]-EYDVAVEAIR.2b3_1.heavy 654.849 / 552.242 18831.0 29.451499938964844 50 20 10 10 10 9.154320412168287 10.923803788545134 0.0 3 0.9952778226449663 17.952303145145578 18831.0 22.374843871817866 0.0 - - - - - - - 757.5 37 8 STAG1 stromal antigen 1 881 112 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9805.[MT7]-EYDVAVEAIR.2y9_1.heavy 654.849 / 1035.55 12770.0 29.451499938964844 50 20 10 10 10 9.154320412168287 10.923803788545134 0.0 3 0.9952778226449663 17.952303145145578 12770.0 31.482280431432976 0.0 - - - - - - - 324.5 25 6 STAG1 stromal antigen 1 883 112 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9805.[MT7]-EYDVAVEAIR.2b5_1.heavy 654.849 / 722.348 6710.0 29.451499938964844 50 20 10 10 10 9.154320412168287 10.923803788545134 0.0 3 0.9952778226449663 17.952303145145578 6710.0 31.980258318364555 0.0 - - - - - - - 302.8 13 10 STAG1 stromal antigen 1 885 112 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9805.[MT7]-EYDVAVEAIR.2y7_1.heavy 654.849 / 757.457 15801.0 29.451499938964844 50 20 10 10 10 9.154320412168287 10.923803788545134 0.0 3 0.9952778226449663 17.952303145145578 15801.0 26.29082193848634 0.0 - - - - - - - 346.2 31 5 STAG1 stromal antigen 1 887 113 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9804.[MT7]-YVGWTLHDR.3y5_1.heavy 430.895 / 641.337 3353.0 28.016199111938477 47 17 10 10 10 3.540232761356552 22.387267385550196 0.0 3 0.9782384329234863 8.35077049626746 3353.0 26.93623430962343 0.0 - - - - - - - 341.85714285714283 6 7 STAG1 stromal antigen 1 889 113 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9804.[MT7]-YVGWTLHDR.3b4_1.heavy 430.895 / 650.342 1437.0 28.016199111938477 47 17 10 10 10 3.540232761356552 22.387267385550196 0.0 3 0.9782384329234863 8.35077049626746 1437.0 6.397531380753138 3.0 - - - - - - - 307.57142857142856 4 7 STAG1 stromal antigen 1 891 113 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9804.[MT7]-YVGWTLHDR.3b3_1.heavy 430.895 / 464.263 5269.0 28.016199111938477 47 17 10 10 10 3.540232761356552 22.387267385550196 0.0 3 0.9782384329234863 8.35077049626746 5269.0 20.68 0.0 - - - - - - - 311.0 10 10 STAG1 stromal antigen 1 893 113 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9804.[MT7]-YVGWTLHDR.3y4_1.heavy 430.895 / 540.289 7664.0 28.016199111938477 47 17 10 10 10 3.540232761356552 22.387267385550196 0.0 3 0.9782384329234863 8.35077049626746 7664.0 43.90493723849372 1.0 - - - - - - - 359.0 15 6 STAG1 stromal antigen 1 895 114 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9807.[MT7]-WDLFGNC[CAM]YR.2y6_1.heavy 687.823 / 816.346 1719.0 37.12832450866699 28 14 0 6 8 1.134078635266925 51.48077396896742 0.03389739990234375 4 0.9419243416913811 5.096132687611605 1719.0 2.498255813953488 5.0 - - - - - - - 621.1111111111111 44 9 STAG1 stromal antigen 1 897 114 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9807.[MT7]-WDLFGNC[CAM]YR.2y8_1.heavy 687.823 / 1044.46 2321.0 37.12832450866699 28 14 0 6 8 1.134078635266925 51.48077396896742 0.03389739990234375 4 0.9419243416913811 5.096132687611605 2321.0 4.048255813953488 0.0 - - - - - - - 277.1111111111111 4 18 STAG1 stromal antigen 1 899 114 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9807.[MT7]-WDLFGNC[CAM]YR.2y5_1.heavy 687.823 / 669.277 2407.0 37.12832450866699 28 14 0 6 8 1.134078635266925 51.48077396896742 0.03389739990234375 4 0.9419243416913811 5.096132687611605 2407.0 6.297383720930232 3.0 - - - - - - - 662.2 6 10 STAG1 stromal antigen 1 901 114 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9807.[MT7]-WDLFGNC[CAM]YR.2y7_1.heavy 687.823 / 929.43 2063.0 37.12832450866699 28 14 0 6 8 1.134078635266925 51.48077396896742 0.03389739990234375 4 0.9419243416913811 5.096132687611605 2063.0 6.856434108527132 2.0 - - - - - - - 688.0 4 7 STAG1 stromal antigen 1 903 115 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9806.[MT7]-SQLIDEFVDR.2y8_1.heavy 683.36 / 1006.52 4197.0 35.46293512980143 41 15 10 6 10 2.043865939320188 39.1340229945158 0.03639984130859375 3 0.9507304330442017 5.536987502402323 4197.0 23.96785725939911 0.0 - - - - - - - 198.33333333333334 8 12 STAG1 stromal antigen 1 905 115 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9806.[MT7]-SQLIDEFVDR.2y5_1.heavy 683.36 / 665.325 N/A 35.46293512980143 41 15 10 6 10 2.043865939320188 39.1340229945158 0.03639984130859375 3 0.9507304330442017 5.536987502402323 3857.0 2.109470616620424 1.0 - - - - - - - 1145.7 7 10 STAG1 stromal antigen 1 907 115 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9806.[MT7]-SQLIDEFVDR.2y6_1.heavy 683.36 / 780.352 2269.0 35.46293512980143 41 15 10 6 10 2.043865939320188 39.1340229945158 0.03639984130859375 3 0.9507304330442017 5.536987502402323 2269.0 8.099604922732677 2.0 - - - - - - - 612.5 4 10 STAG1 stromal antigen 1 909 115 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9806.[MT7]-SQLIDEFVDR.2y7_1.heavy 683.36 / 893.436 2269.0 35.46293512980143 41 15 10 6 10 2.043865939320188 39.1340229945158 0.03639984130859375 3 0.9507304330442017 5.536987502402323 2269.0 10.668535312888286 0.0 - - - - - - - 234.33333333333334 4 15 STAG1 stromal antigen 1 911 116 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9810.[MT7]-HDPQAEEALAK[MT7].3b4_1.heavy 499.603 / 622.307 5394.0 19.816499710083008 42 12 10 10 10 1.5965706233239847 49.300021612166084 0.0 3 0.8915101229477217 3.7124521559960324 5394.0 31.83958333333333 0.0 - - - - - - - 302.4 10 5 STAG1 stromal antigen 1 913 116 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9810.[MT7]-HDPQAEEALAK[MT7].3b5_1.heavy 499.603 / 693.344 3452.0 19.816499710083008 42 12 10 10 10 1.5965706233239847 49.300021612166084 0.0 3 0.8915101229477217 3.7124521559960324 3452.0 10.046107431935246 0.0 - - - - - - - 288.0 6 9 STAG1 stromal antigen 1 915 116 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9810.[MT7]-HDPQAEEALAK[MT7].3y4_1.heavy 499.603 / 546.373 10788.0 19.816499710083008 42 12 10 10 10 1.5965706233239847 49.300021612166084 0.0 3 0.8915101229477217 3.7124521559960324 10788.0 44.82513888888889 0.0 - - - - - - - 280.8 21 10 STAG1 stromal antigen 1 917 116 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9810.[MT7]-HDPQAEEALAK[MT7].3y5_1.heavy 499.603 / 675.416 2158.0 19.816499710083008 42 12 10 10 10 1.5965706233239847 49.300021612166084 0.0 3 0.8915101229477217 3.7124521559960324 2158.0 9.291203703703705 1.0 - - - - - - - 280.8 4 10 STAG1 stromal antigen 1 919 117 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9749.[MT7]-K[MT7]ITQGK[MT7].3y3_1.heavy 369.58 / 476.295 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 921 117 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9749.[MT7]-K[MT7]ITQGK[MT7].3y4_1.heavy 369.58 / 577.343 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 923 117 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9749.[MT7]-K[MT7]ITQGK[MT7].3y5_1.heavy 369.58 / 690.427 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 925 117 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9749.[MT7]-K[MT7]ITQGK[MT7].3y2_1.heavy 369.58 / 348.236 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 927 118 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 SUCC_ECO24.LVQQFTK.2y4.peptide 432.25 / 523.29 184205.0 21.218599319458008 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 184205.0 191.11737593887443 0.0 - - - - - - - 393.3333333333333 368 3 929 118 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 SUCC_ECO24.LVQQFTK.2y6.peptide 432.25 / 750.41 255525.0 21.218599319458008 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 255525.0 145.06592987579586 0.0 - - - - - - - 472.0 511 2 931 118 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 SUCC_ECO24.LVQQFTK.2y5.peptide 432.25 / 651.35 681986.0 21.218599319458008 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 681986.0 722.8562956458518 0.0 - - - - - - - 945.0 1363 2 933 119 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9745.[MT7]-EDTFLK[MT7].2y4_1.heavy 520.797 / 652.415 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 935 119 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9745.[MT7]-EDTFLK[MT7].2y5_1.heavy 520.797 / 767.442 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 937 119 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9745.[MT7]-EDTFLK[MT7].2b4_1.heavy 520.797 / 637.295 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 939 119 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9745.[MT7]-EDTFLK[MT7].2y3_1.heavy 520.797 / 551.367 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 941 120 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9746.[MT7]-EPSSLLK[MT7].2y4_1.heavy 531.326 / 604.415 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 943 120 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9746.[MT7]-EPSSLLK[MT7].2y5_1.heavy 531.326 / 691.447 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 945 120 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9746.[MT7]-EPSSLLK[MT7].2y3_1.heavy 531.326 / 517.383 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 947 120 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9746.[MT7]-EPSSLLK[MT7].2y6_1.heavy 531.326 / 788.5 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 949 121 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9747.[MT7]-K[MT7]SQSSK[MT7].3y3_1.heavy 366.228 / 465.279 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 951 121 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9747.[MT7]-K[MT7]SQSSK[MT7].3y4_1.heavy 366.228 / 593.338 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 953 121 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9747.[MT7]-K[MT7]SQSSK[MT7].3y5_1.heavy 366.228 / 680.37 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 955 121 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9747.[MT7]-K[MT7]SQSSK[MT7].3y2_1.heavy 366.228 / 378.247 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 957 122 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9748.[MT7]-K[MT7]PLALK[MT7].3y3_1.heavy 367.929 / 475.336 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 959 122 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9748.[MT7]-K[MT7]PLALK[MT7].3y4_1.heavy 367.929 / 588.42 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 961 122 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9748.[MT7]-K[MT7]PLALK[MT7].3y5_1.heavy 367.929 / 685.473 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 963 122 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9748.[MT7]-K[MT7]PLALK[MT7].3y2_1.heavy 367.929 / 404.299 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 965 123 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9744.[MT7]-ESLAFK[MT7].2y4_1.heavy 491.794 / 622.404 2798.0 25.93826675415039 43 20 10 5 8 7.791131497263951 12.83510617618474 0.04490089416503906 4 0.9968488954567891 21.9794517662724 2798.0 12.443466887365993 0.0 - - - - - - - 254.0 5 7 CCNB3 cyclin B3 967 123 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9744.[MT7]-ESLAFK[MT7].2y5_1.heavy 491.794 / 709.437 N/A 25.93826675415039 43 20 10 5 8 7.791131497263951 12.83510617618474 0.04490089416503906 4 0.9968488954567891 21.9794517662724 16790.0 33.55896354179546 0.0 - - - - - - - 254.0 33 3 CCNB3 cyclin B3 969 123 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9744.[MT7]-ESLAFK[MT7].2b4_1.heavy 491.794 / 545.305 2798.0 25.93826675415039 43 20 10 5 8 7.791131497263951 12.83510617618474 0.04490089416503906 4 0.9968488954567891 21.9794517662724 2798.0 2.329649406434897 1.0 - - - - - - - 254.0 8 4 CCNB3 cyclin B3 971 123 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9744.[MT7]-ESLAFK[MT7].2y3_1.heavy 491.794 / 509.32 6360.0 25.93826675415039 43 20 10 5 8 7.791131497263951 12.83510617618474 0.04490089416503906 4 0.9968488954567891 21.9794517662724 6360.0 18.53874814286487 0.0 - - - - - - - 254.0 12 3 CCNB3 cyclin B3 973 124 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9743.[MT7]-STTEEK[MT7].2y4_1.heavy 491.768 / 650.348 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 975 124 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9743.[MT7]-STTEEK[MT7].2y5_1.heavy 491.768 / 751.395 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 977 124 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9743.[MT7]-STTEEK[MT7].2b4_1.heavy 491.768 / 563.279 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 979 124 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9743.[MT7]-STTEEK[MT7].2y3_1.heavy 491.768 / 549.3 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 981 125 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9742.[MT7]-EDSLVK[MT7].2y4_1.heavy 489.789 / 590.399 4698.0 20.8617000579834 30 14 2 10 4 1.0729061506301096 55.46967432348517 0.0 8 0.9356678123593632 4.8394052673034675 4698.0 7.998014587076998 1.0 - - - - - - - 264.375 10 8 CCNB3 cyclin B3 983 125 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9742.[MT7]-EDSLVK[MT7].2y5_1.heavy 489.789 / 705.426 2349.0 20.8617000579834 30 14 2 10 4 1.0729061506301096 55.46967432348517 0.0 8 0.9356678123593632 4.8394052673034675 2349.0 9.595914893617023 3.0 - - - - - - - 339.44444444444446 18 9 CCNB3 cyclin B3 985 125 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9742.[MT7]-EDSLVK[MT7].2b4_1.heavy 489.789 / 589.295 3054.0 20.8617000579834 30 14 2 10 4 1.0729061506301096 55.46967432348517 0.0 8 0.9356678123593632 4.8394052673034675 3054.0 3.5743485104118307 3.0 - - - - - - - 391.6666666666667 15 12 CCNB3 cyclin B3 987 125 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9742.[MT7]-EDSLVK[MT7].2y3_1.heavy 489.789 / 503.367 2114.0 20.8617000579834 30 14 2 10 4 1.0729061506301096 55.46967432348517 0.0 8 0.9356678123593632 4.8394052673034675 2114.0 4.947659574468085 8.0 - - - - - - - 320.45454545454544 12 11 CCNB3 cyclin B3 989 126 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9740.[MT7]-VFFLK[MT7].2b3_1.heavy 471.307 / 538.315 3630.0 35.7242488861084 44 20 10 6 8 5.928846474121781 16.866687379489388 0.036098480224609375 4 0.9958240921321698 19.091307315675813 3630.0 8.645427509293679 1.0 - - - - - - - 260.6666666666667 9 12 HAPLN4;CCNB3 hyaluronan and proteoglycan link protein 4;cyclin B3 991 126 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9740.[MT7]-VFFLK[MT7].2y4_1.heavy 471.307 / 698.436 14621.0 35.7242488861084 44 20 10 6 8 5.928846474121781 16.866687379489388 0.036098480224609375 4 0.9958240921321698 19.091307315675813 14621.0 98.5210345674766 0.0 - - - - - - - 238.63636363636363 29 11 HAPLN4;CCNB3 hyaluronan and proteoglycan link protein 4;cyclin B3 993 126 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9740.[MT7]-VFFLK[MT7].2b4_1.heavy 471.307 / 651.399 1210.0 35.7242488861084 44 20 10 6 8 5.928846474121781 16.866687379489388 0.036098480224609375 4 0.9958240921321698 19.091307315675813 1210.0 3.196039603960396 1.0 - - - - - - - 195.26666666666668 2 15 HAPLN4;CCNB3 hyaluronan and proteoglycan link protein 4;cyclin B3 995 126 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9740.[MT7]-VFFLK[MT7].2y3_1.heavy 471.307 / 551.367 7966.0 35.7242488861084 44 20 10 6 8 5.928846474121781 16.866687379489388 0.036098480224609375 4 0.9958240921321698 19.091307315675813 7966.0 49.18309172735455 0.0 - - - - - - - 159.91666666666666 15 12 HAPLN4;CCNB3 hyaluronan and proteoglycan link protein 4;cyclin B3 997 127 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 TNAA_ECO24.GLTFTYEPK.2y7.peptide 528.27 / 885.44 454104.0 29.406999588012695 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 454104.0 499.44776460105385 0.0 - - - - - - - 433.0 908 1 999 127 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 TNAA_ECO24.GLTFTYEPK.2y6.peptide 528.27 / 784.39 472502.0 29.406999588012695 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 472502.0 565.0189182960198 0.0 - - - - - - - 866.0 945 3 1001 127 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 TNAA_ECO24.GLTFTYEPK.2y5.peptide 528.27 / 637.32 771147.0 29.406999588012695 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 771147.0 14.903028189044543 1.0 - - - - - - - 1731.5 1736 2 1003 128 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9738.[MT7]-LLPFK[MT7].2y4_1.heavy 453.307 / 648.42 8603.0 33.689300537109375 48 20 10 10 8 25.87188015193185 3.8652003415582072 0.0 4 0.9977254052980292 25.871880908759817 8603.0 19.67154286616409 3.0 - - - - - - - 287.85714285714283 39 14 LOC100507209;CCNB3 hypothetical protein LOC100507209;cyclin B3 1005 128 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9738.[MT7]-LLPFK[MT7].2b4_1.heavy 453.307 / 615.399 N/A 33.689300537109375 48 20 10 10 8 25.87188015193185 3.8652003415582072 0.0 4 0.9977254052980292 25.871880908759817 403.0 -0.5 10.0 - - - - - - - 223.83333333333334 2 12 LOC100507209;CCNB3 hypothetical protein LOC100507209;cyclin B3 1007 128 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9738.[MT7]-LLPFK[MT7].2y3_1.heavy 453.307 / 535.336 28633.0 33.689300537109375 48 20 10 10 8 25.87188015193185 3.8652003415582072 0.0 4 0.9977254052980292 25.871880908759817 28633.0 125.1909687831917 0.0 - - - - - - - 227.30769230769232 57 13 LOC100507209;CCNB3 hypothetical protein LOC100507209;cyclin B3 1009 128 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9738.[MT7]-LLPFK[MT7].2y1_1.heavy 453.307 / 291.215 N/A 33.689300537109375 48 20 10 10 8 25.87188015193185 3.8652003415582072 0.0 4 0.9977254052980292 25.871880908759817 7394.0 3.741680726136087 1.0 - - - - - - - 773.125 42 8 LOC100507209;CCNB3 hypothetical protein LOC100507209;cyclin B3 1011 129 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9739.[MT7]-ETIFK[MT7].2b3_1.heavy 463.283 / 488.284 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1013 129 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9739.[MT7]-ETIFK[MT7].2y4_1.heavy 463.283 / 652.415 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1015 129 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9739.[MT7]-ETIFK[MT7].2b4_1.heavy 463.283 / 635.352 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1017 129 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9739.[MT7]-ETIFK[MT7].2y3_1.heavy 463.283 / 551.367 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1019 130 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9736.[MT7]-EAVLK[MT7].2b3_1.heavy 424.278 / 444.258 N/A N/A - - - - - - - - - 0.0 - - - - - - - AASS;COL6A3;CCNB3;MDC1 aminoadipate-semialdehyde synthase;collagen, type VI, alpha 3;cyclin B3;mediator of DNA-damage checkpoint 1 1021 130 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9736.[MT7]-EAVLK[MT7].2y4_1.heavy 424.278 / 574.404 N/A N/A - - - - - - - - - 0.0 - - - - - - - AASS;COL6A3;CCNB3;MDC1 aminoadipate-semialdehyde synthase;collagen, type VI, alpha 3;cyclin B3;mediator of DNA-damage checkpoint 1 1023 130 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9736.[MT7]-EAVLK[MT7].2b4_1.heavy 424.278 / 557.341 N/A N/A - - - - - - - - - 0.0 - - - - - - - AASS;COL6A3;CCNB3;MDC1 aminoadipate-semialdehyde synthase;collagen, type VI, alpha 3;cyclin B3;mediator of DNA-damage checkpoint 1 1025 130 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9736.[MT7]-EAVLK[MT7].2y3_1.heavy 424.278 / 503.367 N/A N/A - - - - - - - - - 0.0 - - - - - - - AASS;COL6A3;CCNB3;MDC1 aminoadipate-semialdehyde synthase;collagen, type VI, alpha 3;cyclin B3;mediator of DNA-damage checkpoint 1 1027 131 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9737.[MT7]-TLSLK[MT7].2b3_1.heavy 425.286 / 446.273 2079.0 24.324700355529785 24 15 0 5 4 2.2663630550770777 36.46846343250266 0.041599273681640625 7 0.9559033138869317 5.855317101389057 2079.0 2.2276255973273567 6.0 - - - - - - - 260.0 12 6 STK11IP;CLEC16A;P4HTM;NGLY1;CCNB3 serine/threonine kinase 11 interacting protein;C-type lectin domain family 16, member A;prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum);N-glycanase 1;cyclin B3 1029 131 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9737.[MT7]-TLSLK[MT7].2y4_1.heavy 425.286 / 604.415 6238.0 24.324700355529785 24 15 0 5 4 2.2663630550770777 36.46846343250266 0.041599273681640625 7 0.9559033138869317 5.855317101389057 6238.0 28.79076923076923 1.0 - - - - - - - 260.0 12 6 STK11IP;CLEC16A;P4HTM;NGLY1;CCNB3 serine/threonine kinase 11 interacting protein;C-type lectin domain family 16, member A;prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum);N-glycanase 1;cyclin B3 1031 131 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9737.[MT7]-TLSLK[MT7].2b4_1.heavy 425.286 / 559.357 520.0 24.324700355529785 24 15 0 5 4 2.2663630550770777 36.46846343250266 0.041599273681640625 7 0.9559033138869317 5.855317101389057 520.0 -0.0808845447298187 43.0 - - - - - - - 635.5555555555555 56 9 STK11IP;CLEC16A;P4HTM;NGLY1;CCNB3 serine/threonine kinase 11 interacting protein;C-type lectin domain family 16, member A;prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum);N-glycanase 1;cyclin B3 1033 131 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9737.[MT7]-TLSLK[MT7].2y3_1.heavy 425.286 / 491.331 5198.0 24.324700355529785 24 15 0 5 4 2.2663630550770777 36.46846343250266 0.041599273681640625 7 0.9559033138869317 5.855317101389057 5198.0 4.905895758872675 4.0 - - - - - - - 617.5 10 8 STK11IP;CLEC16A;P4HTM;NGLY1;CCNB3 serine/threonine kinase 11 interacting protein;C-type lectin domain family 16, member A;prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum);N-glycanase 1;cyclin B3 1035 132 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9734.[MT7]-ITIPEIATSELVQTC[CAM]LQAIK[MT7].3y7_1.heavy 839.48 / 977.557 2559.0 44.5531005859375 38 15 10 3 10 1.939962752140371 43.11050825621969 0.0706024169921875 3 0.9539698208506321 5.730082965809577 2559.0 9.054923076923076 1.0 - - - - - - - 200.15384615384616 5 13 ANAPC1 anaphase promoting complex subunit 1 1037 132 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9734.[MT7]-ITIPEIATSELVQTC[CAM]LQAIK[MT7].3b6_1.heavy 839.48 / 811.505 2234.0 44.5531005859375 38 15 10 3 10 1.939962752140371 43.11050825621969 0.0706024169921875 3 0.9539698208506321 5.730082965809577 2234.0 6.853277586489589 1.0 - - - - - - - 728.0 4 7 ANAPC1 anaphase promoting complex subunit 1 1039 132 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9734.[MT7]-ITIPEIATSELVQTC[CAM]LQAIK[MT7].3b5_1.heavy 839.48 / 698.42 4272.0 44.5531005859375 38 15 10 3 10 1.939962752140371 43.11050825621969 0.0706024169921875 3 0.9539698208506321 5.730082965809577 4272.0 13.516445828956424 0.0 - - - - - - - 263.8333333333333 8 12 ANAPC1 anaphase promoting complex subunit 1 1041 132 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9734.[MT7]-ITIPEIATSELVQTC[CAM]LQAIK[MT7].3b7_1.heavy 839.48 / 882.542 1345.0 44.5531005859375 38 15 10 3 10 1.939962752140371 43.11050825621969 0.0706024169921875 3 0.9539698208506321 5.730082965809577 1345.0 4.862692307692308 1.0 - - - - - - - 241.0 2 17 ANAPC1 anaphase promoting complex subunit 1 1043 133 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9735.[MT7]-LSSLK[MT7].2b3_1.heavy 418.278 / 432.258 N/A N/A - - - - - - - - - 0.0 - - - - - - - TESK2;RUNDC1;FAT2;CCNB3 testis-specific kinase 2;RUN domain containing 1;FAT tumor suppressor homolog 2 (Drosophila);cyclin B3 1045 133 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9735.[MT7]-LSSLK[MT7].2y4_1.heavy 418.278 / 578.363 N/A N/A - - - - - - - - - 0.0 - - - - - - - TESK2;RUNDC1;FAT2;CCNB3 testis-specific kinase 2;RUN domain containing 1;FAT tumor suppressor homolog 2 (Drosophila);cyclin B3 1047 133 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9735.[MT7]-LSSLK[MT7].2b4_1.heavy 418.278 / 545.341 N/A N/A - - - - - - - - - 0.0 - - - - - - - TESK2;RUNDC1;FAT2;CCNB3 testis-specific kinase 2;RUN domain containing 1;FAT tumor suppressor homolog 2 (Drosophila);cyclin B3 1049 133 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9735.[MT7]-LSSLK[MT7].2y3_1.heavy 418.278 / 491.331 N/A N/A - - - - - - - - - 0.0 - - - - - - - TESK2;RUNDC1;FAT2;CCNB3 testis-specific kinase 2;RUN domain containing 1;FAT tumor suppressor homolog 2 (Drosophila);cyclin B3 1051 134 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7010.[MT7]-ALILK[MT7].2b3_1.heavy 423.307 / 442.315 5107.0 27.79509925842285 48 18 10 10 10 7.116354741944611 14.05213815587193 0.0 3 0.9898253819001717 12.224592488711671 5107.0 6.140742429869106 1.0 - - - - - - - 486.0 13 4 CENPE;MTOR;LOC645177;ATP2C2 centromere protein E, 312kDa;mechanistic target of rapamycin (serine/threonine kinase);hypothetical protein LOC645177;ATPase, Ca++ transporting, type 2C, member 2 1053 134 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7010.[MT7]-ALILK[MT7].2y4_1.heavy 423.307 / 630.467 10943.0 27.79509925842285 48 18 10 10 10 7.116354741944611 14.05213815587193 0.0 3 0.9898253819001717 12.224592488711671 10943.0 63.04609053497943 0.0 - - - - - - - 347.14285714285717 21 7 CENPE;MTOR;LOC645177;ATP2C2 centromere protein E, 312kDa;mechanistic target of rapamycin (serine/threonine kinase);hypothetical protein LOC645177;ATPase, Ca++ transporting, type 2C, member 2 1055 134 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7010.[MT7]-ALILK[MT7].2b4_1.heavy 423.307 / 555.399 2918.0 27.79509925842285 48 18 10 10 10 7.116354741944611 14.05213815587193 0.0 3 0.9898253819001717 12.224592488711671 2918.0 4.244262712782399 1.0 - - - - - - - 364.5 5 8 CENPE;MTOR;LOC645177;ATP2C2 centromere protein E, 312kDa;mechanistic target of rapamycin (serine/threonine kinase);hypothetical protein LOC645177;ATPase, Ca++ transporting, type 2C, member 2 1057 134 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7010.[MT7]-ALILK[MT7].2y3_1.heavy 423.307 / 517.383 9727.0 27.79509925842285 48 18 10 10 10 7.116354741944611 14.05213815587193 0.0 3 0.9898253819001717 12.224592488711671 9727.0 28.020164609053495 0.0 - - - - - - - 334.125 19 8 CENPE;MTOR;LOC645177;ATP2C2 centromere protein E, 312kDa;mechanistic target of rapamycin (serine/threonine kinase);hypothetical protein LOC645177;ATPase, Ca++ transporting, type 2C, member 2 1059 135 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7012.[MT7]-AALPPK[MT7].2y4_1.heavy 442.794 / 598.404 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 1061 135 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7012.[MT7]-AALPPK[MT7].2y5_1.heavy 442.794 / 669.442 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 1063 135 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7012.[MT7]-AALPPK[MT7].2y3_1.heavy 442.794 / 485.32 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 1065 135 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7012.[MT7]-AALPPK[MT7].2y2_1.heavy 442.794 / 388.268 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 1067 136 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9757.[MT7]-NLLALQEK[MT7].3y3_1.heavy 406.255 / 548.316 1038.0 29.614575386047363 43 20 10 5 8 9.167461547165649 10.908145017626772 0.042499542236328125 4 0.9965551236976188 21.02087553292745 1038.0 2.7942307692307686 1.0 - - - - - - - 208.0 2 3 CCNB3 cyclin B3 1069 136 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9757.[MT7]-NLLALQEK[MT7].3b4_1.heavy 406.255 / 556.357 7477.0 29.614575386047363 43 20 10 5 8 9.167461547165649 10.908145017626772 0.042499542236328125 4 0.9965551236976188 21.02087553292745 7477.0 34.59238554216867 0.0 - - - - - - - 332.2 14 5 CCNB3 cyclin B3 1071 136 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9757.[MT7]-NLLALQEK[MT7].3y2_1.heavy 406.255 / 420.258 3323.0 29.614575386047363 43 20 10 5 8 9.167461547165649 10.908145017626772 0.042499542236328125 4 0.9965551236976188 21.02087553292745 3323.0 2.266867311404519 1.0 - - - - - - - 311.5 9 2 CCNB3 cyclin B3 1073 136 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9757.[MT7]-NLLALQEK[MT7].3b3_1.heavy 406.255 / 485.32 5192.0 29.614575386047363 43 20 10 5 8 9.167461547165649 10.908145017626772 0.042499542236328125 4 0.9965551236976188 21.02087553292745 5192.0 16.006653038145362 0.0 - - - - - - - 277.0 10 9 CCNB3 cyclin B3 1075 137 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7014.[MT7]-EGAVAALR.2b4_1.heavy 465.778 / 501.279 3723.0 22.765224933624268 28 16 0 6 6 1.9658602399783336 39.81374489308258 0.03989982604980469 6 0.962569586036143 6.35895877899931 3723.0 2.498389261744966 3.0 - - - - - - - 385.77777777777777 16 9 MTOR mechanistic target of rapamycin (serine/threonine kinase) 1077 137 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7014.[MT7]-EGAVAALR.2b6_1.heavy 465.778 / 643.353 9431.0 22.765224933624268 28 16 0 6 6 1.9658602399783336 39.81374489308258 0.03989982604980469 6 0.962569586036143 6.35895877899931 9431.0 11.53136707962993 2.0 - - - - - - - 851.2857142857143 286 7 MTOR mechanistic target of rapamycin (serine/threonine kinase) 1079 137 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7014.[MT7]-EGAVAALR.2b5_1.heavy 465.778 / 572.316 6701.0 22.765224933624268 28 16 0 6 6 1.9658602399783336 39.81374489308258 0.03989982604980469 6 0.962569586036143 6.35895877899931 6701.0 3.0158675751421864 0.0 - - - - - - - 358.22222222222223 13 9 MTOR mechanistic target of rapamycin (serine/threonine kinase) 1081 137 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7014.[MT7]-EGAVAALR.2y7_1.heavy 465.778 / 657.404 16877.0 22.765224933624268 28 16 0 6 6 1.9658602399783336 39.81374489308258 0.03989982604980469 6 0.962569586036143 6.35895877899931 16877.0 17.812121707721914 1.0 - - - - - - - 372.0 45 6 MTOR mechanistic target of rapamycin (serine/threonine kinase) 1083 138 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9756.[MT7]-NTHALGLAK[MT7].3b4_1.heavy 404.915 / 568.296 5448.0 21.172700881958008 40 20 2 10 8 9.469263315363655 10.560483605704826 0.0 4 0.9950246038479982 17.489134057885092 5448.0 14.405400843881855 0.0 - - - - - - - 474.0 10 2 CCNB3 cyclin B3 1085 138 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9756.[MT7]-NTHALGLAK[MT7].3b3_1.heavy 404.915 / 497.259 9238.0 21.172700881958008 40 20 2 10 8 9.469263315363655 10.560483605704826 0.0 4 0.9950246038479982 17.489134057885092 9238.0 28.51956399437412 0.0 - - - - - - - 395.0 18 6 CCNB3 cyclin B3 1087 138 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9756.[MT7]-NTHALGLAK[MT7].3y4_1.heavy 404.915 / 532.357 21082.0 21.172700881958008 40 20 2 10 8 9.469263315363655 10.560483605704826 0.0 4 0.9950246038479982 17.489134057885092 21082.0 53.314745181271725 1.0 - - - - - - - 368.6666666666667 106 9 CCNB3 cyclin B3 1089 138 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9756.[MT7]-NTHALGLAK[MT7].3y5_1.heavy 404.915 / 645.442 4264.0 21.172700881958008 40 20 2 10 8 9.469263315363655 10.560483605704826 0.0 4 0.9950246038479982 17.489134057885092 4264.0 17.2623453391042 2.0 - - - - - - - 331.8 18 5 CCNB3 cyclin B3 1091 139 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7013.[MT7]-FANYLR.2y4_1.heavy 464.262 / 565.309 8243.0 29.36210060119629 45 15 10 10 10 2.6650615010025627 37.522586237646394 0.0 3 0.9541605185832103 5.742082327305501 8243.0 51.74977578475336 0.0 - - - - - - - 312.2 16 10 MTOR mechanistic target of rapamycin (serine/threonine kinase) 1093 139 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7013.[MT7]-FANYLR.2b3_1.heavy 464.262 / 477.258 14035.0 29.36210060119629 45 15 10 10 10 2.6650615010025627 37.522586237646394 0.0 3 0.9541605185832103 5.742082327305501 14035.0 50.064297078488764 0.0 - - - - - - - 334.5 28 8 MTOR mechanistic target of rapamycin (serine/threonine kinase) 1095 139 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7013.[MT7]-FANYLR.2b5_1.heavy 464.262 / 753.405 4455.0 29.36210060119629 45 15 10 10 10 2.6650615010025627 37.522586237646394 0.0 3 0.9541605185832103 5.742082327305501 4455.0 16.504709728525015 0.0 - - - - - - - 306.625 8 8 MTOR mechanistic target of rapamycin (serine/threonine kinase) 1097 139 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7013.[MT7]-FANYLR.2y1_1.heavy 464.262 / 175.119 27624.0 29.36210060119629 45 15 10 10 10 2.6650615010025627 37.522586237646394 0.0 3 0.9541605185832103 5.742082327305501 27624.0 13.154418227767973 0.0 - - - - - - - 446.0 55 1 MTOR mechanistic target of rapamycin (serine/threonine kinase) 1099 140 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9759.[MT7]-K[MT7]PLVLQK[MT7].3y6_1.heavy 419.959 / 841.563 1010.0 23.085350036621094 43 18 10 5 10 9.624061204407418 10.390623862014113 0.042301177978515625 3 0.9856493896162866 10.289788428756784 1010.0 1.94 5.0 - - - - - - - 253.0 4 6 CCNB3 cyclin B3 1101 140 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9759.[MT7]-K[MT7]PLVLQK[MT7].3y3_1.heavy 419.959 / 532.357 11617.0 23.085350036621094 43 18 10 5 10 9.624061204407418 10.390623862014113 0.042301177978515625 3 0.9856493896162866 10.289788428756784 11617.0 30.663854332662815 0.0 - - - - - - - 577.2857142857143 23 7 CCNB3 cyclin B3 1103 140 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9759.[MT7]-K[MT7]PLVLQK[MT7].3b3_1.heavy 419.959 / 627.443 3536.0 23.085350036621094 43 18 10 5 10 9.624061204407418 10.390623862014113 0.042301177978515625 3 0.9856493896162866 10.289788428756784 3536.0 17.32325879544476 0.0 - - - - - - - 253.0 7 2 CCNB3 cyclin B3 1105 140 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9759.[MT7]-K[MT7]PLVLQK[MT7].3y4_1.heavy 419.959 / 631.426 6061.0 23.085350036621094 43 18 10 5 10 9.624061204407418 10.390623862014113 0.042301177978515625 3 0.9856493896162866 10.289788428756784 6061.0 27.001338763336012 0.0 - - - - - - - 253.0 12 9 CCNB3 cyclin B3 1107 141 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7016.[MT7]-AIQIINR.2y4_1.heavy 486.31 / 515.33 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 1109 141 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7016.[MT7]-AIQIINR.2y5_1.heavy 486.31 / 643.389 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 1111 141 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7016.[MT7]-AIQIINR.2b4_1.heavy 486.31 / 570.373 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 1113 141 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7016.[MT7]-AIQIINR.2y6_1.heavy 486.31 / 756.473 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 1115 142 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9758.[MT7]-TGENC[CAM]QTK[MT7].2y4_1.heavy 613.308 / 680.352 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1117 142 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9758.[MT7]-TGENC[CAM]QTK[MT7].2y5_1.heavy 613.308 / 794.395 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1119 142 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9758.[MT7]-TGENC[CAM]QTK[MT7].2b4_1.heavy 613.308 / 546.264 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1121 142 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9758.[MT7]-TGENC[CAM]QTK[MT7].2y7_1.heavy 613.308 / 980.459 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1123 143 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7113.[MT7]-DSVLIR.2y4_1.heavy 423.762 / 500.355 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 1125 143 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7113.[MT7]-DSVLIR.2b3_1.heavy 423.762 / 446.237 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 1127 143 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7113.[MT7]-DSVLIR.2y5_1.heavy 423.762 / 587.388 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 1129 143 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7113.[MT7]-DSVLIR.2b4_1.heavy 423.762 / 559.321 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 1131 144 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 CH10_ECO24.SAGGIVLTGSAAAK.2y7.peptide 601.84 / 605.33 508487.0 24.293500900268555 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 508487.0 800.2691270314888 0.0 - - - - - - - 5162.0 1016 2 1133 144 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 CH10_ECO24.SAGGIVLTGSAAAK.2y8.peptide 601.84 / 718.41 734524.0 24.293500900268555 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 734524.0 572.7622026075135 0.0 - - - - - - - 6969.0 1469 1 1135 144 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 CH10_ECO24.SAGGIVLTGSAAAK.2y9.peptide 601.84 / 817.48 774910.0 24.293500900268555 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 774910.0 812.0255572997705 0.0 - - - - - - - 7743.0 1549 1 1137 145 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7112.[MT7]-SLQAK[MT7].2y4_1.heavy 417.768 / 603.395 5745.0 16.744199752807617 32 14 2 10 6 2.228856484547408 35.373158342207944 0.0 5 0.938879565899927 4.966288212934401 5745.0 11.49720011199552 2.0 - - - - - - - 291.125 16 8 UBE3A;PGS1;NUP155;SEMA3E ubiquitin protein ligase E3A;phosphatidylglycerophosphate synthase 1;nucleoporin 155kDa;sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E 1139 145 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7112.[MT7]-SLQAK[MT7].2b3_1.heavy 417.768 / 473.284 5590.0 16.744199752807617 32 14 2 10 6 2.228856484547408 35.373158342207944 0.0 5 0.938879565899927 4.966288212934401 5590.0 18.694173500930674 0.0 - - - - - - - 248.5 11 10 UBE3A;PGS1;NUP155;SEMA3E ubiquitin protein ligase E3A;phosphatidylglycerophosphate synthase 1;nucleoporin 155kDa;sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E 1141 145 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7112.[MT7]-SLQAK[MT7].2b4_1.heavy 417.768 / 544.321 2174.0 16.744199752807617 32 14 2 10 6 2.228856484547408 35.373158342207944 0.0 5 0.938879565899927 4.966288212934401 2174.0 2.0961814842192505 31.0 - - - - - - - 341.8 32 5 UBE3A;PGS1;NUP155;SEMA3E ubiquitin protein ligase E3A;phosphatidylglycerophosphate synthase 1;nucleoporin 155kDa;sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E 1143 145 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7112.[MT7]-SLQAK[MT7].2y3_1.heavy 417.768 / 490.311 3571.0 16.744199752807617 32 14 2 10 6 2.228856484547408 35.373158342207944 0.0 5 0.938879565899927 4.966288212934401 3571.0 8.51333762886598 3.0 - - - - - - - 279.7 7 10 UBE3A;PGS1;NUP155;SEMA3E ubiquitin protein ligase E3A;phosphatidylglycerophosphate synthase 1;nucleoporin 155kDa;sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E 1145 146 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7114.[MT7]-MIIAK[MT7].2b3_1.heavy 432.285 / 502.318 5468.0 25.244600296020508 38 14 9 5 10 2.1882904270638375 45.697773368307466 0.042999267578125 3 0.9357298455186125 4.841765821537095 5468.0 19.311170825335896 0.0 - - - - - - - 586.0 10 8 UBE3A ubiquitin protein ligase E3A 1147 146 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7114.[MT7]-MIIAK[MT7].2y4_1.heavy 432.285 / 588.42 8332.0 25.244600296020508 38 14 9 5 10 2.1882904270638375 45.697773368307466 0.042999267578125 3 0.9357298455186125 4.841765821537095 8332.0 41.14947586003249 0.0 - - - - - - - 260.0 16 5 UBE3A ubiquitin protein ligase E3A 1149 146 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7114.[MT7]-MIIAK[MT7].2b4_1.heavy 432.285 / 573.355 3645.0 25.244600296020508 38 14 9 5 10 2.1882904270638375 45.697773368307466 0.042999267578125 3 0.9357298455186125 4.841765821537095 3645.0 19.626923076923077 4.0 - - - - - - - 260.0 20 6 UBE3A ubiquitin protein ligase E3A 1151 146 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7114.[MT7]-MIIAK[MT7].2y3_1.heavy 432.285 / 475.336 9373.0 25.244600296020508 38 14 9 5 10 2.1882904270638375 45.697773368307466 0.042999267578125 3 0.9357298455186125 4.841765821537095 9373.0 23.75193907117456 0.0 - - - - - - - 260.0 18 5 UBE3A ubiquitin protein ligase E3A 1153 147 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7111.[MT7]-TLDC[CAM]R.2b3_1.heavy 404.709 / 474.268 15125.0 16.608699798583984 36 20 2 10 4 3.6525116713814003 27.378420384945528 0.0 10 0.993074796481585 14.821602063466734 15125.0 109.95165618060696 0.0 - - - - - - - 231.375 30 8 UBE3A ubiquitin protein ligase E3A 1155 147 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7111.[MT7]-TLDC[CAM]R.2y4_1.heavy 404.709 / 563.261 3087.0 16.608699798583984 36 20 2 10 4 3.6525116713814003 27.378420384945528 0.0 10 0.993074796481585 14.821602063466734 3087.0 14.483218312851097 4.0 - - - - - - - 282.9166666666667 69 12 UBE3A ubiquitin protein ligase E3A 1157 147 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7111.[MT7]-TLDC[CAM]R.2b4_1.heavy 404.709 / 634.299 1698.0 16.608699798583984 36 20 2 10 4 3.6525116713814003 27.378420384945528 0.0 10 0.993074796481585 14.821602063466734 1698.0 7.310917402335969 7.0 - - - - - - - 295.8333333333333 9 12 UBE3A ubiquitin protein ligase E3A 1159 147 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7111.[MT7]-TLDC[CAM]R.2y3_1.heavy 404.709 / 450.177 463.0 16.608699798583984 36 20 2 10 4 3.6525116713814003 27.378420384945528 0.0 10 0.993074796481585 14.821602063466734 463.0 0.4 40.0 - - - - - - - 298.3333333333333 47 15 UBE3A ubiquitin protein ligase E3A 1161 148 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7110.[MT7]-RAAAK[MT7].2y4_1.heavy 402.768 / 504.326 N/A N/A - - - - - - - - - 0.0 - - - - - - - HEXIM1;C2CD4C;CAND2;UTP20;CAND1;LOC653877;UBE3A;PRRC2A hexamethylene bis-acetamide inducible 1;C2 calcium-dependent domain containing 4C;cullin-associated and neddylation-dissociated 2 (putative);UTP20, small subunit (SSU) processome component, homolog (yeast);cullin-associated and neddylation-dissociated 1;small subunit processome component 20 homolog;ubiquitin protein ligase E3A;proline-rich coiled-coil 2A 1163 148 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7110.[MT7]-RAAAK[MT7].2b4_1.heavy 402.768 / 514.322 N/A N/A - - - - - - - - - 0.0 - - - - - - - HEXIM1;C2CD4C;CAND2;UTP20;CAND1;LOC653877;UBE3A;PRRC2A hexamethylene bis-acetamide inducible 1;C2 calcium-dependent domain containing 4C;cullin-associated and neddylation-dissociated 2 (putative);UTP20, small subunit (SSU) processome component, homolog (yeast);cullin-associated and neddylation-dissociated 1;small subunit processome component 20 homolog;ubiquitin protein ligase E3A;proline-rich coiled-coil 2A 1165 148 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7110.[MT7]-RAAAK[MT7].2y3_1.heavy 402.768 / 433.289 N/A N/A - - - - - - - - - 0.0 - - - - - - - HEXIM1;C2CD4C;CAND2;UTP20;CAND1;LOC653877;UBE3A;PRRC2A hexamethylene bis-acetamide inducible 1;C2 calcium-dependent domain containing 4C;cullin-associated and neddylation-dissociated 2 (putative);UTP20, small subunit (SSU) processome component, homolog (yeast);cullin-associated and neddylation-dissociated 1;small subunit processome component 20 homolog;ubiquitin protein ligase E3A;proline-rich coiled-coil 2A 1167 148 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7110.[MT7]-RAAAK[MT7].2y1_1.heavy 402.768 / 291.215 N/A N/A - - - - - - - - - 0.0 - - - - - - - HEXIM1;C2CD4C;CAND2;UTP20;CAND1;LOC653877;UBE3A;PRRC2A hexamethylene bis-acetamide inducible 1;C2 calcium-dependent domain containing 4C;cullin-associated and neddylation-dissociated 2 (putative);UTP20, small subunit (SSU) processome component, homolog (yeast);cullin-associated and neddylation-dissociated 1;small subunit processome component 20 homolog;ubiquitin protein ligase E3A;proline-rich coiled-coil 2A 1169 149 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7106.[MT7]-ALEGHER.2y4_1.heavy 478.258 / 498.242 N/A N/A - - - - - - - - - 0.0 - - - - - - - SYVN1 synovial apoptosis inhibitor 1, synoviolin 1171 149 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7106.[MT7]-ALEGHER.2y5_1.heavy 478.258 / 627.284 N/A N/A - - - - - - - - - 0.0 - - - - - - - SYVN1 synovial apoptosis inhibitor 1, synoviolin 1173 149 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7106.[MT7]-ALEGHER.2b4_1.heavy 478.258 / 515.295 N/A N/A - - - - - - - - - 0.0 - - - - - - - SYVN1 synovial apoptosis inhibitor 1, synoviolin 1175 149 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7106.[MT7]-ALEGHER.2y6_1.heavy 478.258 / 740.369 N/A N/A - - - - - - - - - 0.0 - - - - - - - SYVN1 synovial apoptosis inhibitor 1, synoviolin 1177 150 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9763.[MT7]-TPNTEEASLFR.2y8_1.heavy 704.863 / 952.473 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1179 150 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9763.[MT7]-TPNTEEASLFR.2y5_1.heavy 704.863 / 593.341 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1181 150 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9763.[MT7]-TPNTEEASLFR.2y9_1.heavy 704.863 / 1066.52 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1183 150 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9763.[MT7]-TPNTEEASLFR.2y10_1.heavy 704.863 / 1163.57 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1185 151 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6995.[MT7]-TTTWEDPRLK[MT7].3b6_1.heavy 512.287 / 878.401 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L;NEDD4 neural precursor cell expressed, developmentally down-regulated 4-like;neural precursor cell expressed, developmentally down-regulated 4 1187 151 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6995.[MT7]-TTTWEDPRLK[MT7].3b4_1.heavy 512.287 / 634.332 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L;NEDD4 neural precursor cell expressed, developmentally down-regulated 4-like;neural precursor cell expressed, developmentally down-regulated 4 1189 151 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6995.[MT7]-TTTWEDPRLK[MT7].3b5_1.heavy 512.287 / 763.374 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L;NEDD4 neural precursor cell expressed, developmentally down-regulated 4-like;neural precursor cell expressed, developmentally down-regulated 4 1191 151 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6995.[MT7]-TTTWEDPRLK[MT7].3y4_1.heavy 512.287 / 657.453 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L;NEDD4 neural precursor cell expressed, developmentally down-regulated 4-like;neural precursor cell expressed, developmentally down-regulated 4 1193 152 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7006.[MT7]-LSLYVADENRELALVQTK[MT7].3b4_1.heavy 784.112 / 621.373 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1195 152 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7006.[MT7]-LSLYVADENRELALVQTK[MT7].3y14_2.heavy 784.112 / 865.482 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1197 152 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7006.[MT7]-LSLYVADENRELALVQTK[MT7].3y4_1.heavy 784.112 / 619.39 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1199 152 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7006.[MT7]-LSLYVADENRELALVQTK[MT7].3b13_2.heavy 784.112 / 809.932 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1201 153 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9764.[MT7]-NPTTEETVLTK[MT7].3y3_1.heavy 507.619 / 505.347 9540.0 24.303900718688965 39 16 10 5 8 1.4351145821324274 44.21275412407808 0.041599273681640625 4 0.9646855636557992 6.547866286721113 9540.0 14.896426601573111 0.0 - - - - - - - 258.0 19 1 CCNB3 cyclin B3 1203 153 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9764.[MT7]-NPTTEETVLTK[MT7].3b6_1.heavy 507.619 / 816.386 1289.0 24.303900718688965 39 16 10 5 8 1.4351145821324274 44.21275412407808 0.041599273681640625 4 0.9646855636557992 6.547866286721113 1289.0 3.1976744186046506 2.0 - - - - - - - 258.0 2 2 CCNB3 cyclin B3 1205 153 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9764.[MT7]-NPTTEETVLTK[MT7].3b7_1.heavy 507.619 / 917.433 1289.0 24.303900718688965 39 16 10 5 8 1.4351145821324274 44.21275412407808 0.041599273681640625 4 0.9646855636557992 6.547866286721113 1289.0 5.495736434108527 0.0 - - - - - - - 258.0 2 5 CCNB3 cyclin B3 1207 153 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9764.[MT7]-NPTTEETVLTK[MT7].3b5_1.heavy 507.619 / 687.343 3352.0 24.303900718688965 39 16 10 5 8 1.4351145821324274 44.21275412407808 0.041599273681640625 4 0.9646855636557992 6.547866286721113 3352.0 16.28361757105943 1.0 - - - - - - - 258.0 11 3 CCNB3 cyclin B3 1209 154 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6996.[MT7]-TSPQELSEELSRR.3b4_1.heavy 559.296 / 558.3 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1211 154 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6996.[MT7]-TSPQELSEELSRR.3y11_2.heavy 559.296 / 672.349 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1213 154 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6996.[MT7]-TSPQELSEELSRR.3b5_1.heavy 559.296 / 687.343 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1215 154 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6996.[MT7]-TSPQELSEELSRR.3y12_2.heavy 559.296 / 715.865 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1217 155 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7007.[MT7]-ITQWEDPRLQNPAITGPAVPYSR.3b6_1.heavy 918.488 / 917.448 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1219 155 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7007.[MT7]-ITQWEDPRLQNPAITGPAVPYSR.3y4_1.heavy 918.488 / 522.267 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1221 155 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7007.[MT7]-ITQWEDPRLQNPAITGPAVPYSR.3y12_1.heavy 918.488 / 1228.67 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1223 155 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7007.[MT7]-ITQWEDPRLQNPAITGPAVPYSR.3y9_1.heavy 918.488 / 947.495 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1225 156 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9765.[MT7]-HTTLQEVSLSK[MT7].3b6_1.heavy 510.962 / 854.449 2318.0 24.282750606536865 43 18 10 5 10 3.21251672151406 24.446362653583645 0.04300117492675781 3 0.9879681118777401 11.239812460711516 2318.0 10.78139534883721 0.0 - - - - - - - 258.0 4 2 CCNB3 cyclin B3 1227 156 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9765.[MT7]-HTTLQEVSLSK[MT7].3b4_1.heavy 510.962 / 597.348 2576.0 24.282750606536865 43 18 10 5 10 3.21251672151406 24.446362653583645 0.04300117492675781 3 0.9879681118777401 11.239812460711516 2576.0 5.602174757281554 0.0 - - - - - - - 258.0 5 8 CCNB3 cyclin B3 1229 156 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9765.[MT7]-HTTLQEVSLSK[MT7].3b5_1.heavy 510.962 / 725.406 2061.0 24.282750606536865 43 18 10 5 10 3.21251672151406 24.446362653583645 0.04300117492675781 3 0.9879681118777401 11.239812460711516 2061.0 9.801825566352779 0.0 - - - - - - - 258.0 4 6 CCNB3 cyclin B3 1231 156 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9765.[MT7]-HTTLQEVSLSK[MT7].3y4_1.heavy 510.962 / 578.363 5925.0 24.282750606536865 43 18 10 5 10 3.21251672151406 24.446362653583645 0.04300117492675781 3 0.9879681118777401 11.239812460711516 5925.0 12.883948554993156 0.0 - - - - - - - 588.7142857142857 11 7 CCNB3 cyclin B3 1233 157 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6997.[MT7]-ARLWIEFESEK[MT7].3b6_1.heavy 565.982 / 913.538 3307.0 34.142799377441406 41 11 10 10 10 2.159623304385421 46.30437159894312 0.0 3 0.8774106041725277 3.4881570987705706 3307.0 15.649318219902035 0.0 - - - - - - - 287.75 6 12 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1235 157 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6997.[MT7]-ARLWIEFESEK[MT7].3y3_1.heavy 565.982 / 507.289 10782.0 34.142799377441406 41 11 10 10 10 2.159623304385421 46.30437159894312 0.0 3 0.8774106041725277 3.4881570987705706 10782.0 37.5118364317546 0.0 - - - - - - - 739.5714285714286 21 7 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1237 157 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6997.[MT7]-ARLWIEFESEK[MT7].3b4_1.heavy 565.982 / 671.411 2444.0 34.142799377441406 41 11 10 10 10 2.159623304385421 46.30437159894312 0.0 3 0.8774106041725277 3.4881570987705706 2444.0 7.922664799793999 1.0 - - - - - - - 298.6923076923077 4 13 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1239 157 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6997.[MT7]-ARLWIEFESEK[MT7].3y5_1.heavy 565.982 / 783.401 4169.0 34.142799377441406 41 11 10 10 10 2.159623304385421 46.30437159894312 0.0 3 0.8774106041725277 3.4881570987705706 4169.0 19.128740171435936 0.0 - - - - - - - 243.46153846153845 8 13 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1241 158 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7008.[MT7]-AWGAAR.2b3_1.heavy 388.22 / 459.247 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 1243 158 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7008.[MT7]-AWGAAR.2y5_1.heavy 388.22 / 560.294 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 1245 158 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7008.[MT7]-AWGAAR.2b4_1.heavy 388.22 / 530.284 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 1247 158 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7008.[MT7]-AWGAAR.2b5_1.heavy 388.22 / 601.321 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 1249 159 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9766.[MT7]-IVPSHHDPSEK[MT7].3y3_1.heavy 511.947 / 507.289 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1251 159 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9766.[MT7]-IVPSHHDPSEK[MT7].3b5_1.heavy 511.947 / 678.406 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1253 159 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9766.[MT7]-IVPSHHDPSEK[MT7].3y4_1.heavy 511.947 / 604.342 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1255 159 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9766.[MT7]-IVPSHHDPSEK[MT7].3y5_1.heavy 511.947 / 719.369 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1257 160 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6998.[MT7]-LQNPAITGPAVPYSR.3y7_1.heavy 576.657 / 789.425 4815.0 28.82349967956543 45 17 10 10 8 3.140941280172986 31.83758977961299 0.0 4 0.9761709831139431 7.978901687097277 4815.0 12.836744164136816 1.0 - - - - - - - 275.0 9 10 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1259 160 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6998.[MT7]-LQNPAITGPAVPYSR.3b5_1.heavy 576.657 / 668.385 6421.0 28.82349967956543 45 17 10 10 8 3.140941280172986 31.83758977961299 0.0 4 0.9761709831139431 7.978901687097277 6421.0 10.748317349607671 0.0 - - - - - - - 344.0 12 4 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1261 160 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6998.[MT7]-LQNPAITGPAVPYSR.3y4_1.heavy 576.657 / 522.267 13070.0 28.82349967956543 45 17 10 10 8 3.140941280172986 31.83758977961299 0.0 4 0.9761709831139431 7.978901687097277 13070.0 17.49191912149037 3.0 - - - - - - - 413.0 30 5 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1263 160 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6998.[MT7]-LQNPAITGPAVPYSR.3b3_1.heavy 576.657 / 500.295 16968.0 28.82349967956543 45 17 10 10 8 3.140941280172986 31.83758977961299 0.0 4 0.9761709831139431 7.978901687097277 16968.0 16.41415853009054 0.0 - - - - - - - 327.57142857142856 33 7 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1265 161 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7009.[MT7]-VYLPR.2b3_1.heavy 396.248 / 520.325 4341.0 26.308349609375 34 17 8 5 4 1.8050633451695082 41.59602847241535 0.0457000732421875 10 0.9765417569957812 8.041961177703806 4341.0 15.521176470588236 2.0 - - - - - - - 255.0 10 4 MTOR mechanistic target of rapamycin (serine/threonine kinase) 1267 161 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7009.[MT7]-VYLPR.2y4_1.heavy 396.248 / 548.319 14300.0 26.308349609375 34 17 8 5 4 1.8050633451695082 41.59602847241535 0.0457000732421875 10 0.9765417569957812 8.041961177703806 14300.0 53.523400239914956 1.0 - - - - - - - 255.0 28 4 MTOR mechanistic target of rapamycin (serine/threonine kinase) 1269 161 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7009.[MT7]-VYLPR.2y2_1.heavy 396.248 / 272.172 2298.0 26.308349609375 34 17 8 5 4 1.8050633451695082 41.59602847241535 0.0457000732421875 10 0.9765417569957812 8.041961177703806 2298.0 0.8999999999999999 7.0 - - - - - - - 255.0 35 5 MTOR mechanistic target of rapamycin (serine/threonine kinase) 1271 161 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7009.[MT7]-VYLPR.2b2_1.heavy 396.248 / 407.241 2298.0 26.308349609375 34 17 8 5 4 1.8050633451695082 41.59602847241535 0.0457000732421875 10 0.9765417569957812 8.041961177703806 2298.0 0.7073377373971445 2.0 - - - - - - - 255.0 13 3 MTOR mechanistic target of rapamycin (serine/threonine kinase) 1273 162 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6999.[MT7]-K[MT7]DIFGASDPYVK[MT7].3y3_1.heavy 591.337 / 553.347 9118.0 28.328699111938477 28 8 4 10 6 0.6077859644209538 85.68921603389141 0.0 5 0.7968789035397348 2.690564963783053 9118.0 25.644375 2.0 - - - - - - - 336.0 104 5 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1275 162 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6999.[MT7]-K[MT7]DIFGASDPYVK[MT7].3y4_1.heavy 591.337 / 650.399 22556.0 28.328699111938477 28 8 4 10 6 0.6077859644209538 85.68921603389141 0.0 5 0.7968789035397348 2.690564963783053 22556.0 39.473 0.0 - - - - - - - 390.0 45 8 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1277 162 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6999.[MT7]-K[MT7]DIFGASDPYVK[MT7].3b2_1.heavy 591.337 / 532.333 4559.0 28.328699111938477 28 8 4 10 6 0.6077859644209538 85.68921603389141 0.0 5 0.7968789035397348 2.690564963783053 4559.0 2.13052268520711 1.0 - - - - - - - 1782.857142857143 10 7 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1279 162 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6999.[MT7]-K[MT7]DIFGASDPYVK[MT7].3b8_2.heavy 591.337 / 561.805 26635.0 28.328699111938477 28 8 4 10 6 0.6077859644209538 85.68921603389141 0.0 5 0.7968789035397348 2.690564963783053 26635.0 90.63298611111111 0.0 - - - - - - - 320.0 53 9 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1281 163 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9760.[MT7]-TDAEEDSLK[MT7].2y8_1.heavy 648.332 / 1050.51 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1283 163 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9760.[MT7]-TDAEEDSLK[MT7].2b4_1.heavy 648.332 / 561.264 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1285 163 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9760.[MT7]-TDAEEDSLK[MT7].2b6_1.heavy 648.332 / 805.333 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1287 163 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9760.[MT7]-TDAEEDSLK[MT7].2y7_1.heavy 648.332 / 935.48 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1289 164 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9761.[MT7]-TEESIPTHK[MT7].3y3_1.heavy 443.913 / 529.321 5433.0 18.412599563598633 44 20 6 10 8 4.635320462339103 21.573481448041544 0.0 4 0.9920900364257305 13.867189194322973 5433.0 2.0089337378393584 4.0 - - - - - - - 281.0 29 2 CCNB3 cyclin B3 1291 164 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9761.[MT7]-TEESIPTHK[MT7].3b4_1.heavy 443.913 / 591.274 9929.0 18.412599563598633 44 20 6 10 8 4.635320462339103 21.573481448041544 0.0 4 0.9920900364257305 13.867189194322973 9929.0 23.625479137655372 0.0 - - - - - - - 249.66666666666666 19 6 CCNB3 cyclin B3 1293 164 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9761.[MT7]-TEESIPTHK[MT7].3y4_1.heavy 443.913 / 626.374 5433.0 18.412599563598633 44 20 6 10 8 4.635320462339103 21.573481448041544 0.0 4 0.9920900364257305 13.867189194322973 5433.0 22.16664 1.0 - - - - - - - 722.4285714285714 13 7 CCNB3 cyclin B3 1295 164 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9761.[MT7]-TEESIPTHK[MT7].3b3_1.heavy 443.913 / 504.242 5620.0 18.412599563598633 44 20 6 10 8 4.635320462339103 21.573481448041544 0.0 4 0.9920900364257305 13.867189194322973 5620.0 7.600507207688201 0.0 - - - - - - - 281.0 11 4 CCNB3 cyclin B3 1297 165 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9762.[MT7]-FLSQEPSALK[MT7].2y8_1.heavy 704.408 / 1003.55 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1299 165 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9762.[MT7]-FLSQEPSALK[MT7].2y5_1.heavy 704.408 / 659.421 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1301 165 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9762.[MT7]-FLSQEPSALK[MT7].2y6_1.heavy 704.408 / 788.463 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1303 165 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9762.[MT7]-FLSQEPSALK[MT7].2b5_1.heavy 704.408 / 749.395 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1305 166 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6990.[MT7]-LWIEFESEK[MT7].2y8_1.heavy 734.9 / 1211.61 5237.0 37.872501373291016 46 16 10 10 10 4.416010110572454 22.64487569006875 0.0 3 0.9601142776357566 6.158847538174383 5237.0 27.66638523125786 0.0 - - - - - - - 208.73684210526315 10 19 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1307 166 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6990.[MT7]-LWIEFESEK[MT7].2y5_1.heavy 734.9 / 783.401 8015.0 37.872501373291016 46 16 10 10 10 4.416010110572454 22.64487569006875 0.0 3 0.9601142776357566 6.158847538174383 8015.0 18.095136637332097 0.0 - - - - - - - 628.0833333333334 16 12 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1309 166 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6990.[MT7]-LWIEFESEK[MT7].2y3_1.heavy 734.9 / 507.289 4603.0 37.872501373291016 46 16 10 10 10 4.416010110572454 22.64487569006875 0.0 3 0.9601142776357566 6.158847538174383 4603.0 28.846817729610734 0.0 - - - - - - - 251.16666666666666 9 18 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1311 166 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6990.[MT7]-LWIEFESEK[MT7].2y6_1.heavy 734.9 / 912.443 9284.0 37.872501373291016 46 16 10 10 10 4.416010110572454 22.64487569006875 0.0 3 0.9601142776357566 6.158847538174383 9284.0 28.7974110964836 0.0 - - - - - - - 680.2857142857143 18 7 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1313 167 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9769.[MT7]-ESFSQEPSALQK[MT7].3b6_1.heavy 546.957 / 852.386 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1315 167 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9769.[MT7]-ESFSQEPSALQK[MT7].3y6_1.heavy 546.957 / 787.479 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1317 167 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9769.[MT7]-ESFSQEPSALQK[MT7].3b3_1.heavy 546.957 / 508.252 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1319 167 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9769.[MT7]-ESFSQEPSALQK[MT7].3y5_1.heavy 546.957 / 690.427 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1321 168 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6993.[MT7]-TSPQELSEELSR.2y8_1.heavy 760.39 / 962.479 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1323 168 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6993.[MT7]-TSPQELSEELSR.2y6_1.heavy 760.39 / 720.352 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1325 168 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6993.[MT7]-TSPQELSEELSR.2y10_1.heavy 760.39 / 1187.59 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1327 168 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6993.[MT7]-TSPQELSEELSR.2y7_1.heavy 760.39 / 833.436 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1329 169 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7004.[MT7]-TSLNPNDLGPLPPGWEER.3y7_1.heavy 712.7 / 870.41 7015.0 34.36280059814453 48 18 10 10 10 5.110873525426092 19.566126906195166 0.0 3 0.9860537316025015 10.438241307205006 7015.0 0.0 2.0 - - - - - - - 220.2 14 5 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1331 169 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7004.[MT7]-TSLNPNDLGPLPPGWEER.3y6_1.heavy 712.7 / 773.358 4952.0 34.36280059814453 48 18 10 10 10 5.110873525426092 19.566126906195166 0.0 3 0.9860537316025015 10.438241307205006 4952.0 3.31093023255814 0.0 - - - - - - - 808.125 9 8 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1333 169 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7004.[MT7]-TSLNPNDLGPLPPGWEER.3b4_1.heavy 712.7 / 560.316 10179.0 34.36280059814453 48 18 10 10 10 5.110873525426092 19.566126906195166 0.0 3 0.9860537316025015 10.438241307205006 10179.0 2.003372874080605 0.0 - - - - - - - 367.0 20 3 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1335 169 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7004.[MT7]-TSLNPNDLGPLPPGWEER.3b7_1.heavy 712.7 / 886.439 4952.0 34.36280059814453 48 18 10 10 10 5.110873525426092 19.566126906195166 0.0 3 0.9860537316025015 10.438241307205006 4952.0 0.8 0.0 - - - - - - - 192.9 9 10 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1337 170 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9768.[MT7]-HTTQEEVSILK[MT7].3b6_1.heavy 524.966 / 870.407 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1339 170 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9768.[MT7]-HTTQEEVSILK[MT7].3b4_1.heavy 524.966 / 612.322 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1341 170 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9768.[MT7]-HTTQEEVSILK[MT7].3b5_1.heavy 524.966 / 741.365 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1343 170 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9768.[MT7]-HTTQEEVSILK[MT7].3y4_1.heavy 524.966 / 604.415 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1345 171 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6992.[MT7]-DIFGASDPYVK[MT7].2b3_1.heavy 750.403 / 520.289 6759.0 31.94159984588623 45 20 10 5 10 14.002035836411054 7.14181860183209 0.04099845886230469 3 0.997641525189477 25.407466152908135 6759.0 17.980204876075884 0.0 - - - - - - - 210.36363636363637 13 11 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1347 171 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6992.[MT7]-DIFGASDPYVK[MT7].2y4_1.heavy 750.403 / 650.399 33437.0 31.94159984588623 45 20 10 5 10 14.002035836411054 7.14181860183209 0.04099845886230469 3 0.997641525189477 25.407466152908135 33437.0 54.15324042505931 0.0 - - - - - - - 790.2222222222222 66 9 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1349 171 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6992.[MT7]-DIFGASDPYVK[MT7].2b4_1.heavy 750.403 / 577.31 5514.0 31.94159984588623 45 20 10 5 10 14.002035836411054 7.14181860183209 0.04099845886230469 3 0.997641525189477 25.407466152908135 5514.0 9.200020860000947 0.0 - - - - - - - 254.28571428571428 11 7 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1351 171 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6992.[MT7]-DIFGASDPYVK[MT7].2b7_1.heavy 750.403 / 850.406 14584.0 31.94159984588623 45 20 10 5 10 14.002035836411054 7.14181860183209 0.04099845886230469 3 0.997641525189477 25.407466152908135 14584.0 28.65162077795571 0.0 - - - - - - - 284.8 29 5 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1353 172 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9767.[MT7]-EPLPFK[MT7]EEK[MT7].3y6_2.heavy 516.971 / 533.313 13549.0 25.30900001525879 47 17 10 10 10 8.129313265002638 12.301162071156515 0.0 2 0.9770412549904097 8.129313519423658 13549.0 32.764061938859534 0.0 - - - - - - - 261.0 27 4 CCNB3 cyclin B3 1355 172 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9767.[MT7]-EPLPFK[MT7]EEK[MT7].3y6_1.heavy 516.971 / 1065.62 N/A 25.30900001525879 47 17 10 10 10 8.129313265002638 12.301162071156515 0.0 2 0.9770412549904097 8.129313519423658 261.0 1.0 2.0 - - - - - - - 0.0 1 0 CCNB3 cyclin B3 1357 172 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9767.[MT7]-EPLPFK[MT7]EEK[MT7].3y3_1.heavy 516.971 / 549.3 N/A 25.30900001525879 47 17 10 10 10 8.129313265002638 12.301162071156515 0.0 2 0.9770412549904097 8.129313519423658 1303.0 1.7830371457604157 13.0 - - - - - - - 670.1428571428571 3 7 CCNB3 cyclin B3 1359 172 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9767.[MT7]-EPLPFK[MT7]EEK[MT7].3y8_2.heavy 516.971 / 638.381 8599.0 25.30900001525879 47 17 10 10 10 8.129313265002638 12.301162071156515 0.0 2 0.9770412549904097 8.129313519423658 8599.0 10.604702460830339 0.0 - - - - - - - 261.0 17 7 CCNB3 cyclin B3 1361 173 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6991.[MT7]-NNIFEESYRR.3b4_1.heavy 491.252 / 633.348 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1363 173 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6991.[MT7]-NNIFEESYRR.3b5_1.heavy 491.252 / 762.39 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1365 173 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6991.[MT7]-NNIFEESYRR.3y8_2.heavy 491.252 / 550.28 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1367 173 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6991.[MT7]-NNIFEESYRR.3y9_2.heavy 491.252 / 607.302 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1369 174 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7002.[MT7]-SLSSPTVTLSAPLEGAK[MT7].2y8_1.heavy 973.556 / 916.522 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1371 174 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7002.[MT7]-SLSSPTVTLSAPLEGAK[MT7].2y9_1.heavy 973.556 / 1029.61 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1373 174 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7002.[MT7]-SLSSPTVTLSAPLEGAK[MT7].2b4_1.heavy 973.556 / 519.289 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1375 174 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7002.[MT7]-SLSSPTVTLSAPLEGAK[MT7].2y6_1.heavy 973.556 / 758.453 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1377 175 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7104.[MT7]-QHLEAR.2y4_1.heavy 449.255 / 488.283 1252.0 14.173700332641602 42 20 8 10 4 2.6888933092368736 28.023279644739755 0.0 7 0.9928166879615973 14.552569693077242 1252.0 6.922509278017821 6.0 - - - - - - - 202.78947368421052 13 19 SYVN1 synovial apoptosis inhibitor 1, synoviolin 1379 175 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7104.[MT7]-QHLEAR.2b3_1.heavy 449.255 / 523.311 N/A 14.173700332641602 42 20 8 10 4 2.6888933092368736 28.023279644739755 0.0 7 0.9928166879615973 14.552569693077242 289.0 0.8999999999999999 46.0 - - - - - - - 208.70833333333334 5 24 SYVN1 synovial apoptosis inhibitor 1, synoviolin 1381 175 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7104.[MT7]-QHLEAR.2y5_1.heavy 449.255 / 625.342 5009.0 14.173700332641602 42 20 8 10 4 2.6888933092368736 28.023279644739755 0.0 7 0.9928166879615973 14.552569693077242 5009.0 12.45977038677359 1.0 - - - - - - - 255.56521739130434 10 23 SYVN1 synovial apoptosis inhibitor 1, synoviolin 1383 175 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7104.[MT7]-QHLEAR.2b4_1.heavy 449.255 / 652.354 1541.0 14.173700332641602 42 20 8 10 4 2.6888933092368736 28.023279644739755 0.0 7 0.9928166879615973 14.552569693077242 1541.0 11.869216804979253 2.0 - - - - - - - 187.0 6 17 SYVN1 synovial apoptosis inhibitor 1, synoviolin 1385 176 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 TPX_ECO57.DLSDVTLGQFAGK.2y7.peptide 675.85 / 720.4 897251.0 33.572200775146484 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 897251.0 118.48165093697077 0.0 - - - - - - - 443.0 1794 1 1387 176 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 TPX_ECO57.DLSDVTLGQFAGK.2y8.peptide 675.85 / 821.45 1939270.0 33.572200775146484 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 1939270.0 89.51357762448197 0.0 - - - - - - - 886.0 3878 1 1389 176 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 TPX_ECO57.DLSDVTLGQFAGK.2y6.peptide 675.85 / 607.32 1716060.0 33.572200775146484 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 1716060.0 86.3007323996859 0.0 - - - - - - - 1477.0 3432 2 1391 177 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7103.[MT7]-SWFQR.2b3_1.heavy 434.233 / 565.289 7000.0 28.82349967956543 43 13 10 10 10 1.9705401617143645 50.74750666994794 0.0 3 0.9119433584653025 4.12801912891781 7000.0 27.64840182648402 0.0 - - - - - - - 328.5 14 10 SYVN1 synovial apoptosis inhibitor 1, synoviolin 1393 177 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7103.[MT7]-SWFQR.2y4_1.heavy 434.233 / 636.325 9844.0 28.82349967956543 43 13 10 10 10 1.9705401617143645 50.74750666994794 0.0 3 0.9119433584653025 4.12801912891781 9844.0 17.7962348256265 1.0 - - - - - - - 350.4 21 5 SYVN1 synovial apoptosis inhibitor 1, synoviolin 1395 177 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7103.[MT7]-SWFQR.2b4_1.heavy 434.233 / 693.348 6563.0 28.82349967956543 43 13 10 10 10 1.9705401617143645 50.74750666994794 0.0 3 0.9119433584653025 4.12801912891781 6563.0 16.430977816046966 0.0 - - - - - - - 312.85714285714283 13 7 SYVN1 synovial apoptosis inhibitor 1, synoviolin 1397 177 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7103.[MT7]-SWFQR.2y3_1.heavy 434.233 / 450.246 6563.0 28.82349967956543 43 13 10 10 10 1.9705401617143645 50.74750666994794 0.0 3 0.9119433584653025 4.12801912891781 6563.0 35.87393250918811 0.0 - - - - - - - 316.3333333333333 13 9 SYVN1 synovial apoptosis inhibitor 1, synoviolin 1399 178 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7102.[MT7]-LQSLR.2b3_1.heavy 380.743 / 473.284 51657.0 21.218599319458008 16 0 2 10 4 0.22695244534055056 152.56993824364903 0.0 9 0.39514375924024825 1.4986873055760792 51657.0 63.805494039706375 0.0 - - - - - - - 811.25 103 8 LOC100506504;FAM186B;ZMYND15;SYVN1 hypothetical protein LOC100506504;family with sequence similarity 186, member B;zinc finger, MYND-type containing 15;synovial apoptosis inhibitor 1, synoviolin 1401 178 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7102.[MT7]-LQSLR.2y4_1.heavy 380.743 / 503.294 2496.0 21.218599319458008 16 0 2 10 4 0.22695244534055056 152.56993824364903 0.0 9 0.39514375924024825 1.4986873055760792 2496.0 7.651062659364122 10.0 - - - - - - - 926.8571428571429 301 7 LOC100506504;FAM186B;ZMYND15;SYVN1 hypothetical protein LOC100506504;family with sequence similarity 186, member B;zinc finger, MYND-type containing 15;synovial apoptosis inhibitor 1, synoviolin 1403 178 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7102.[MT7]-LQSLR.2b4_1.heavy 380.743 / 586.368 26952.0 21.218599319458008 16 0 2 10 4 0.22695244534055056 152.56993824364903 0.0 9 0.39514375924024825 1.4986873055760792 26952.0 4.537041521016285 0.0 - - - - - - - 374.5 53 10 LOC100506504;FAM186B;ZMYND15;SYVN1 hypothetical protein LOC100506504;family with sequence similarity 186, member B;zinc finger, MYND-type containing 15;synovial apoptosis inhibitor 1, synoviolin 1405 178 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7102.[MT7]-LQSLR.2b2_1.heavy 380.743 / 386.252 250.0 21.218599319458008 16 0 2 10 4 0.22695244534055056 152.56993824364903 0.0 9 0.39514375924024825 1.4986873055760792 250.0 -0.3999999999999999 46.0 - - - - - - - 374.5 15 12 LOC100506504;FAM186B;ZMYND15;SYVN1 hypothetical protein LOC100506504;family with sequence similarity 186, member B;zinc finger, MYND-type containing 15;synovial apoptosis inhibitor 1, synoviolin 1407 179 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7100.[MT7]-VVSQSLQHYLELGRQELFK[MT7].3y18_2.heavy 854.814 / 1160.13 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 1409 179 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7100.[MT7]-VVSQSLQHYLELGRQELFK[MT7].3y17_2.heavy 854.814 / 1110.6 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 1411 179 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7100.[MT7]-VVSQSLQHYLELGRQELFK[MT7].3y8_1.heavy 854.814 / 1134.68 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 1413 179 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7100.[MT7]-VVSQSLQHYLELGRQELFK[MT7].3y12_2.heavy 854.814 / 838.966 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 1415 180 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9776.[MT7]-ISPSSLQESPSSLQGALK[MT7].3b5_1.heavy 706.395 / 616.342 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1417 180 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9776.[MT7]-ISPSSLQESPSSLQGALK[MT7].3y4_1.heavy 706.395 / 532.357 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1419 180 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9776.[MT7]-ISPSSLQESPSSLQGALK[MT7].3y5_1.heavy 706.395 / 660.416 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1421 180 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9776.[MT7]-ISPSSLQESPSSLQGALK[MT7].3y9_1.heavy 706.395 / 1044.62 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1423 181 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6986.[MT7]-QINQEAAHRR.3y9_2.heavy 456.252 / 547.794 2554.0 14.05750036239624 42 15 10 7 10 2.15273165355822 37.13087423698602 0.026800155639648438 3 0.956473116952016 5.89380240138028 2554.0 7.010980392156863 0.0 - - - - - - - 193.83333333333334 5 18 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1425 181 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6986.[MT7]-QINQEAAHRR.3b4_1.heavy 456.252 / 628.354 1958.0 14.05750036239624 42 15 10 7 10 2.15273165355822 37.13087423698602 0.026800155639648438 3 0.956473116952016 5.89380240138028 1958.0 3.4536028332037656 0.0 - - - - - - - 151.22222222222223 3 18 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1427 181 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6986.[MT7]-QINQEAAHRR.3b5_1.heavy 456.252 / 757.396 1022.0 14.05750036239624 42 15 10 7 10 2.15273165355822 37.13087423698602 0.026800155639648438 3 0.956473116952016 5.89380240138028 1022.0 8.817254901960784 0.0 - - - - - - - 161.7 2 10 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1429 181 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6986.[MT7]-QINQEAAHRR.3b3_1.heavy 456.252 / 500.295 2043.0 14.05750036239624 42 15 10 7 10 2.15273165355822 37.13087423698602 0.026800155639648438 3 0.956473116952016 5.89380240138028 2043.0 25.580958070956843 0.0 - - - - - - - 192.34782608695653 4 23 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1431 182 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9777.[MT7]-TLLVPQVGTSPNVSSTAPESITSK[MT7].4y4_1.heavy 676.127 / 592.379 7113.0 33.585366566975914 31 9 10 6 6 0.9730360864794818 66.28177352651986 0.03949737548828125 5 0.809531781606771 2.7816574488995687 7113.0 9.339253821997648 0.0 - - - - - - - 693.8571428571429 14 7 CCNB3 cyclin B3 1433 182 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9777.[MT7]-TLLVPQVGTSPNVSSTAPESITSK[MT7].4y5_1.heavy 676.127 / 679.411 1561.0 33.585366566975914 31 9 10 6 6 0.9730360864794818 66.28177352651986 0.03949737548828125 5 0.809531781606771 2.7816574488995687 1561.0 2.1013461538461535 8.0 - - - - - - - 245.5 3 12 CCNB3 cyclin B3 1435 182 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9777.[MT7]-TLLVPQVGTSPNVSSTAPESITSK[MT7].4y7_1.heavy 676.127 / 905.506 N/A 33.585366566975914 31 9 10 6 6 0.9730360864794818 66.28177352651986 0.03949737548828125 5 0.809531781606771 2.7816574488995687 694.0 0.5338461538461539 29.0 - - - - - - - 309.7142857142857 8 14 CCNB3 cyclin B3 1437 182 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9777.[MT7]-TLLVPQVGTSPNVSSTAPESITSK[MT7].4b4_1.heavy 676.127 / 571.394 6072.0 33.585366566975914 31 9 10 6 6 0.9730360864794818 66.28177352651986 0.03949737548828125 5 0.809531781606771 2.7816574488995687 6072.0 19.075044025408094 0.0 - - - - - - - 274.5 12 12 CCNB3 cyclin B3 1439 183 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6987.[MT7]-TFYIDHNSK[MT7].3y3_1.heavy 471.585 / 492.29 7018.0 23.00119972229004 37 14 10 5 8 1.9182962654002718 44.965922961267964 0.042400360107421875 4 0.9467075810342335 5.322085046391171 7018.0 16.518430851063833 0.0 - - - - - - - 251.0 14 5 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1441 183 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6987.[MT7]-TFYIDHNSK[MT7].3b5_1.heavy 471.585 / 784.4 2005.0 23.00119972229004 37 14 10 5 8 1.9182962654002718 44.965922961267964 0.042400360107421875 4 0.9467075810342335 5.322085046391171 2005.0 11.638505936334504 1.0 - - - - - - - 251.0 14 3 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1443 183 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6987.[MT7]-TFYIDHNSK[MT7].3b3_1.heavy 471.585 / 556.289 3258.0 23.00119972229004 37 14 10 5 8 1.9182962654002718 44.965922961267964 0.042400360107421875 4 0.9467075810342335 5.322085046391171 3258.0 15.189669715951744 1.0 - - - - - - - 251.0 6 8 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1445 183 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6987.[MT7]-TFYIDHNSK[MT7].3y4_1.heavy 471.585 / 629.349 1003.0 23.00119972229004 37 14 10 5 8 1.9182962654002718 44.965922961267964 0.042400360107421875 4 0.9467075810342335 5.322085046391171 1003.0 0.9992031872509958 13.0 - - - - - - - 251.0 6 5 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1447 184 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9774.[MT7]-LK[MT7]PLVLQEITSGEK[MT7].3b4_1.heavy 663.077 / 740.527 4225.0 34.731099128723145 40 14 10 6 10 1.862608644194599 42.583833134798944 0.035999298095703125 3 0.9418245281553845 5.091715734151097 4225.0 12.654589371980677 0.0 - - - - - - - 339.73333333333335 8 15 CCNB3 cyclin B3 1449 184 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9774.[MT7]-LK[MT7]PLVLQEITSGEK[MT7].3b5_1.heavy 663.077 / 839.596 5840.0 34.731099128723145 40 14 10 6 10 1.862608644194599 42.583833134798944 0.035999298095703125 3 0.9418245281553845 5.091715734151097 5840.0 15.427496884794019 0.0 - - - - - - - 319.64285714285717 11 14 CCNB3 cyclin B3 1451 184 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9774.[MT7]-LK[MT7]PLVLQEITSGEK[MT7].3y4_1.heavy 663.077 / 564.311 13172.0 34.731099128723145 40 14 10 6 10 1.862608644194599 42.583833134798944 0.035999298095703125 3 0.9418245281553845 5.091715734151097 13172.0 28.116789012897762 1.0 - - - - - - - 783.8461538461538 26 13 CCNB3 cyclin B3 1453 184 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9774.[MT7]-LK[MT7]PLVLQEITSGEK[MT7].3y5_1.heavy 663.077 / 665.359 21746.0 34.731099128723145 40 14 10 6 10 1.862608644194599 42.583833134798944 0.035999298095703125 3 0.9418245281553845 5.091715734151097 21746.0 52.809609772891335 0.0 - - - - - - - 389.46666666666664 43 15 CCNB3 cyclin B3 1455 185 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6984.[MT7]-TYYVNHNNR.3b4_1.heavy 442.222 / 671.352 1477.0 17.207599639892578 46 16 10 10 10 4.503737631879491 22.20378009859073 0.0 3 0.9656341608697072 6.638152739792883 1477.0 4.059232840821007 1.0 - - - - - - - 262.4 4 5 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1457 185 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6984.[MT7]-TYYVNHNNR.3b5_1.heavy 442.222 / 785.395 2297.0 17.207599639892578 46 16 10 10 10 4.503737631879491 22.20378009859073 0.0 3 0.9656341608697072 6.638152739792883 2297.0 26.611585365853657 0.0 - - - - - - - 164.0 4 2 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1459 185 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6984.[MT7]-TYYVNHNNR.3b3_1.heavy 442.222 / 572.284 11320.0 17.207599639892578 46 16 10 10 10 4.503737631879491 22.20378009859073 0.0 3 0.9656341608697072 6.638152739792883 11320.0 53.723983739837394 0.0 - - - - - - - 328.0 22 9 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1461 185 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6984.[MT7]-TYYVNHNNR.3y5_1.heavy 442.222 / 654.307 3773.0 17.207599639892578 46 16 10 10 10 4.503737631879491 22.20378009859073 0.0 3 0.9656341608697072 6.638152739792883 3773.0 23.312845528455284 0.0 - - - - - - - 328.0 7 4 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1463 186 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9775.[MT7]-SPTEESPFDEALAFTK[MT7].3y3_1.heavy 686.349 / 539.331 6773.0 38.47249984741211 44 18 10 6 10 6.185070793730571 16.167963687879517 0.03179931640625 3 0.9878977068776353 11.207004965315056 6773.0 19.539576899334044 0.0 - - - - - - - 673.75 13 8 CCNB3 cyclin B3 1465 186 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9775.[MT7]-SPTEESPFDEALAFTK[MT7].3b6_1.heavy 686.349 / 775.359 6151.0 38.47249984741211 44 18 10 6 10 6.185070793730571 16.167963687879517 0.03179931640625 3 0.9878977068776353 11.207004965315056 6151.0 5.083471074380165 1.0 - - - - - - - 799.7142857142857 12 7 CCNB3 cyclin B3 1467 186 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9775.[MT7]-SPTEESPFDEALAFTK[MT7].3b5_1.heavy 686.349 / 688.327 3110.0 38.47249984741211 44 18 10 6 10 6.185070793730571 16.167963687879517 0.03179931640625 3 0.9878977068776353 11.207004965315056 3110.0 3.805657894736842 0.0 - - - - - - - 247.88235294117646 6 17 CCNB3 cyclin B3 1469 186 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9775.[MT7]-SPTEESPFDEALAFTK[MT7].3y4_1.heavy 686.349 / 610.368 5598.0 38.47249984741211 44 18 10 6 10 6.185070793730571 16.167963687879517 0.03179931640625 3 0.9878977068776353 11.207004965315056 5598.0 5.204752066115702 1.0 - - - - - - - 744.7777777777778 11 9 CCNB3 cyclin B3 1471 187 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6985.[MT7]-WNEEFYFR.2y4_1.heavy 667.818 / 632.319 9849.0 36.175048828125 46 20 10 6 10 6.41384774907773 15.59126501161169 0.03530120849609375 3 0.9951317599621483 17.680723517347197 9849.0 14.229817423305857 0.0 - - - - - - - 811.5833333333334 19 12 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1473 187 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6985.[MT7]-WNEEFYFR.2b4_1.heavy 667.818 / 703.317 8207.0 36.175048828125 46 20 10 6 10 6.41384774907773 15.59126501161169 0.03530120849609375 3 0.9951317599621483 17.680723517347197 8207.0 12.436932947703932 0.0 - - - - - - - 790.3333333333334 16 9 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1475 187 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6985.[MT7]-WNEEFYFR.2y6_1.heavy 667.818 / 890.404 6675.0 36.175048828125 46 20 10 6 10 6.41384774907773 15.59126501161169 0.03530120849609375 3 0.9951317599621483 17.680723517347197 6675.0 13.667276051188301 0.0 - - - - - - - 265.57142857142856 13 14 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1477 187 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6985.[MT7]-WNEEFYFR.2y7_1.heavy 667.818 / 1004.45 21011.0 36.175048828125 46 20 10 6 10 6.41384774907773 15.59126501161169 0.03530120849609375 3 0.9951317599621483 17.680723517347197 21011.0 63.61139931089572 0.0 - - - - - - - 276.6470588235294 42 17 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1479 188 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9772.[MT7]-EEPTIEDETLINK[MT7].3b6_1.heavy 606.991 / 843.422 7530.0 29.181499481201172 46 16 10 10 10 4.191124707417964 23.859943805300713 0.0 3 0.9688072456406926 6.969475437293868 7530.0 45.963126768331925 0.0 - - - - - - - 309.8 15 10 CCNB3 cyclin B3 1481 188 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9772.[MT7]-EEPTIEDETLINK[MT7].3y3_1.heavy 606.991 / 518.342 21481.0 29.181499481201172 46 16 10 10 10 4.191124707417964 23.859943805300713 0.0 3 0.9688072456406926 6.969475437293868 21481.0 30.135654700356802 0.0 - - - - - - - 369.0 42 3 CCNB3 cyclin B3 1483 188 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9772.[MT7]-EEPTIEDETLINK[MT7].3b4_1.heavy 606.991 / 601.295 9744.0 29.181499481201172 46 16 10 10 10 4.191124707417964 23.859943805300713 0.0 3 0.9688072456406926 6.969475437293868 9744.0 4.028903225806451 1.0 - - - - - - - 443.0 19 1 CCNB3 cyclin B3 1485 188 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9772.[MT7]-EEPTIEDETLINK[MT7].3b5_1.heavy 606.991 / 714.379 5315.0 29.181499481201172 46 16 10 10 10 4.191124707417964 23.859943805300713 0.0 3 0.9688072456406926 6.969475437293868 5315.0 9.123849054755608 0.0 - - - - - - - 398.6 10 5 CCNB3 cyclin B3 1487 189 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9773.[MT7]-SGSLFQEALVLQEK[MT7].3b8_1.heavy 613.015 / 964.486 3628.0 37.59922504425049 37 14 10 3 10 1.7065578009700957 39.06499189700453 0.06529998779296875 3 0.9445065753705922 5.2144977113633635 3628.0 1.1499207606973056 1.0 - - - - - - - 199.93333333333334 7 15 CCNB3 cyclin B3 1489 189 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9773.[MT7]-SGSLFQEALVLQEK[MT7].3b6_1.heavy 613.015 / 764.406 1498.0 37.59922504425049 37 14 10 3 10 1.7065578009700957 39.06499189700453 0.06529998779296875 3 0.9445065753705922 5.2144977113633635 1498.0 2.935695287458228 0.0 - - - - - - - 228.75 2 20 CCNB3 cyclin B3 1491 189 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9773.[MT7]-SGSLFQEALVLQEK[MT7].3b5_1.heavy 613.015 / 636.347 2681.0 37.59922504425049 37 14 10 3 10 1.7065578009700957 39.06499189700453 0.06529998779296875 3 0.9445065753705922 5.2144977113633635 2681.0 0.8855392633660797 1.0 - - - - - - - 296.7647058823529 5 17 CCNB3 cyclin B3 1493 189 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9773.[MT7]-SGSLFQEALVLQEK[MT7].3y4_1.heavy 613.015 / 661.4 4811.0 37.59922504425049 37 14 10 3 10 1.7065578009700957 39.06499189700453 0.06529998779296875 3 0.9445065753705922 5.2144977113633635 4811.0 9.442871590467487 0.0 - - - - - - - 729.5 9 8 CCNB3 cyclin B3 1495 190 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9770.[MT7]-K[MT7]PLILQTTSGEK[MT7].3y6_1.heavy 583.028 / 766.406 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1497 190 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9770.[MT7]-K[MT7]PLILQTTSGEK[MT7].3b4_1.heavy 583.028 / 740.527 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1499 190 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9770.[MT7]-K[MT7]PLILQTTSGEK[MT7].3b3_1.heavy 583.028 / 627.443 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1501 190 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9770.[MT7]-K[MT7]PLILQTTSGEK[MT7].3y4_1.heavy 583.028 / 564.311 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNB3 cyclin B3 1503 191 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9779.[MT7]-IEAGIR.2y4_1.heavy 401.749 / 416.262 70672.0 24.85919952392578 35 10 10 5 10 1.3952231948477543 71.67312037907449 0.042400360107421875 3 0.8237002399881586 2.894937170906034 70672.0 78.11299840397406 0.0 - - - - - - - 494.0 141 2 STAG1 stromal antigen 1 1505 191 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9779.[MT7]-IEAGIR.2y5_1.heavy 401.749 / 545.304 340014.0 24.85919952392578 35 10 10 5 10 1.3952231948477543 71.67312037907449 0.042400360107421875 3 0.8237002399881586 2.894937170906034 340014.0 269.0108206797486 0.0 - - - - - - - 329.3333333333333 680 3 STAG1 stromal antigen 1 1507 191 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9779.[MT7]-IEAGIR.2b4_1.heavy 401.749 / 515.295 25205.0 24.85919952392578 35 10 10 5 10 1.3952231948477543 71.67312037907449 0.042400360107421875 3 0.8237002399881586 2.894937170906034 25205.0 7.421352300053227 1.0 - - - - - - - 370.5 50 6 STAG1 stromal antigen 1 1509 191 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9779.[MT7]-IEAGIR.2b5_1.heavy 401.749 / 628.379 1977.0 24.85919952392578 35 10 10 5 10 1.3952231948477543 71.67312037907449 0.042400360107421875 3 0.8237002399881586 2.894937170906034 1977.0 1.1734280604654277 15.0 - - - - - - - 395.2 14 5 STAG1 stromal antigen 1 1511 192 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6981.[MT7]-VAGLAVFHGK[MT7].3b6_1.heavy 429.599 / 655.426 6721.0 28.690000534057617 44 15 9 10 10 3.203465715610402 31.2161917365629 0.0 3 0.9561088627248809 5.869113937966695 6721.0 37.96339593153064 0.0 - - - - - - - 270.6666666666667 13 6 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1513 192 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6981.[MT7]-VAGLAVFHGK[MT7].3b5_1.heavy 429.599 / 556.357 10661.0 28.690000534057617 44 15 9 10 10 3.203465715610402 31.2161917365629 0.0 3 0.9561088627248809 5.869113937966695 10661.0 24.61628399804428 1.0 - - - - - - - 309.3333333333333 21 6 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1515 192 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6981.[MT7]-VAGLAVFHGK[MT7].3y4_1.heavy 429.599 / 632.364 2318.0 28.690000534057617 44 15 9 10 10 3.203465715610402 31.2161917365629 0.0 3 0.9561088627248809 5.869113937966695 2318.0 1.8344484541816386 1.0 - - - - - - - 278.4 5 5 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1517 192 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6981.[MT7]-VAGLAVFHGK[MT7].3y5_1.heavy 429.599 / 731.432 2318.0 28.690000534057617 44 15 9 10 10 3.203465715610402 31.2161917365629 0.0 3 0.9561088627248809 5.869113937966695 2318.0 11.490086206896551 1.0 - - - - - - - 232.0 24 6 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1519 193 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9778.[MT7]-QGEVR.2y4_1.heavy 366.71 / 460.251 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1;STAG2 stromal antigen 1;stromal antigen 2 1521 193 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9778.[MT7]-QGEVR.2b3_1.heavy 366.71 / 459.232 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1;STAG2 stromal antigen 1;stromal antigen 2 1523 193 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9778.[MT7]-QGEVR.2b4_1.heavy 366.71 / 558.3 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1;STAG2 stromal antigen 1;stromal antigen 2 1525 193 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9778.[MT7]-QGEVR.2y2_1.heavy 366.71 / 274.187 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1;STAG2 stromal antigen 1;stromal antigen 2 1527 194 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6982.[MT7]-NNIFEESYR.2y4_1.heavy 658.324 / 554.257 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1529 194 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6982.[MT7]-NNIFEESYR.2y8_1.heavy 658.324 / 1057.49 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1531 194 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6982.[MT7]-NNIFEESYR.2y6_1.heavy 658.324 / 830.368 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1533 194 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6982.[MT7]-NNIFEESYR.2y7_1.heavy 658.324 / 943.452 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1535 195 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7131.[MT7]-LHQC[CAM]YWK[MT7].3y3_1.heavy 441.569 / 640.357 8219.0 24.293500900268555 50 20 10 10 10 5.6191942661990035 17.796145721732287 0.0 3 0.9929878989517895 14.729370400496459 8219.0 14.930482169491183 0.0 - - - - - - - 257.0 16 5 UBE3A ubiquitin protein ligase E3A 1537 195 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7131.[MT7]-LHQC[CAM]YWK[MT7].3b3_1.heavy 441.569 / 523.311 2055.0 24.293500900268555 50 20 10 10 10 5.6191942661990035 17.796145721732287 0.0 3 0.9929878989517895 14.729370400496459 2055.0 2.2210645187349374 1.0 - - - - - - - 257.0 4 2 UBE3A ubiquitin protein ligase E3A 1539 195 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7131.[MT7]-LHQC[CAM]YWK[MT7].3y4_1.heavy 441.569 / 800.388 2055.0 24.293500900268555 50 20 10 10 10 5.6191942661990035 17.796145721732287 0.0 3 0.9929878989517895 14.729370400496459 2055.0 14.392996108949417 0.0 - - - - - - - 257.0 4 2 UBE3A ubiquitin protein ligase E3A 1541 195 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7131.[MT7]-LHQC[CAM]YWK[MT7].3y2_1.heavy 441.569 / 477.294 25170.0 24.293500900268555 50 20 10 10 10 5.6191942661990035 17.796145721732287 0.0 3 0.9929878989517895 14.729370400496459 25170.0 39.45527122823941 0.0 - - - - - - - 642.5 50 8 UBE3A ubiquitin protein ligase E3A 1543 196 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7130.[MT7]-DHIIDDALVR.3y6_1.heavy 437.578 / 688.362 11369.0 27.474700927734375 37 15 6 10 6 1.9526581406040369 40.220419406558925 0.0 5 0.9504706204044248 5.522324146091823 11369.0 13.4130812134923 1.0 - - - - - - - 370.5 34 2 UBE3A ubiquitin protein ligase E3A 1545 196 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7130.[MT7]-DHIIDDALVR.3b3_1.heavy 437.578 / 510.279 8156.0 27.474700927734375 37 15 6 10 6 1.9526581406040369 40.220419406558925 0.0 5 0.9504706204044248 5.522324146091823 8156.0 4.35173307858789 1.0 - - - - - - - 411.6666666666667 26 3 UBE3A ubiquitin protein ligase E3A 1547 196 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7130.[MT7]-DHIIDDALVR.3y4_1.heavy 437.578 / 458.309 4202.0 27.474700927734375 37 15 6 10 6 1.9526581406040369 40.220419406558925 0.0 5 0.9504706204044248 5.522324146091823 4202.0 4.344160722988848 2.0 - - - - - - - 370.5 36 8 UBE3A ubiquitin protein ligase E3A 1549 196 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7130.[MT7]-DHIIDDALVR.3y5_1.heavy 437.578 / 573.336 4449.0 27.474700927734375 37 15 6 10 6 1.9526581406040369 40.220419406558925 0.0 5 0.9504706204044248 5.522324146091823 4449.0 17.873677028166192 1.0 - - - - - - - 444.6 12 10 UBE3A ubiquitin protein ligase E3A 1551 197 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7133.[MT7]-DVTYLTEEK[MT7].2y4_1.heavy 693.374 / 650.348 11746.0 26.37779998779297 46 16 10 10 10 3.196384501359565 24.90817507770716 0.0 3 0.9632051283969795 6.413985856083962 11746.0 24.959908322102685 0.0 - - - - - - - 255.0 23 6 UBE3A ubiquitin protein ligase E3A 1553 197 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7133.[MT7]-DVTYLTEEK[MT7].2y5_1.heavy 693.374 / 763.432 12257.0 26.37779998779297 46 16 10 10 10 3.196384501359565 24.90817507770716 0.0 3 0.9632051283969795 6.413985856083962 12257.0 54.30178282432785 0.0 - - - - - - - 255.0 24 2 UBE3A ubiquitin protein ligase E3A 1555 197 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7133.[MT7]-DVTYLTEEK[MT7].2y6_1.heavy 693.374 / 926.495 4852.0 26.37779998779297 46 16 10 10 10 3.196384501359565 24.90817507770716 0.0 3 0.9632051283969795 6.413985856083962 4852.0 16.97270086982161 1.0 - - - - - - - 255.0 12 4 UBE3A ubiquitin protein ligase E3A 1557 197 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7133.[MT7]-DVTYLTEEK[MT7].2y7_1.heavy 693.374 / 1027.54 5362.0 26.37779998779297 46 16 10 10 10 3.196384501359565 24.90817507770716 0.0 3 0.9632051283969795 6.413985856083962 5362.0 22.375100725221593 0.0 - - - - - - - 255.0 10 3 UBE3A ubiquitin protein ligase E3A 1559 198 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7135.[MT7]-EREDYSPLIR.3y6_1.heavy 474.588 / 748.435 6274.0 25.223100662231445 46 16 10 10 10 5.018204472500512 19.92744627047275 0.0 3 0.968291479599951 6.912260255630158 6274.0 28.716592968652705 0.0 - - - - - - - 261.0 12 6 UBE3A ubiquitin protein ligase E3A 1561 198 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7135.[MT7]-EREDYSPLIR.3b4_1.heavy 474.588 / 674.323 2091.0 25.223100662231445 46 16 10 10 10 5.018204472500512 19.92744627047275 0.0 3 0.968291479599951 6.912260255630158 2091.0 4.187334183673469 1.0 - - - - - - - 261.0 4 7 UBE3A ubiquitin protein ligase E3A 1563 198 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7135.[MT7]-EREDYSPLIR.3y4_1.heavy 474.588 / 498.34 12286.0 25.223100662231445 46 16 10 10 10 5.018204472500512 19.92744627047275 0.0 3 0.968291479599951 6.912260255630158 12286.0 28.55701659499248 0.0 - - - - - - - 261.0 24 2 UBE3A ubiquitin protein ligase E3A 1565 198 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7135.[MT7]-EREDYSPLIR.3y5_1.heavy 474.588 / 585.372 2876.0 25.223100662231445 46 16 10 10 10 5.018204472500512 19.92744627047275 0.0 3 0.968291479599951 6.912260255630158 2876.0 7.083542800130493 1.0 - - - - - - - 634.8571428571429 5 7 UBE3A ubiquitin protein ligase E3A 1567 199 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7134.[MT7]-GASSAYLENSK[MT7].3b6_1.heavy 472.252 / 681.332 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 1569 199 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7134.[MT7]-GASSAYLENSK[MT7].3b5_1.heavy 472.252 / 518.269 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 1571 199 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7134.[MT7]-GASSAYLENSK[MT7].3y4_1.heavy 472.252 / 621.332 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 1573 199 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7134.[MT7]-GASSAYLENSK[MT7].3y2_1.heavy 472.252 / 378.247 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 1575 200 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7137.[MT7]-VDPLETELGVK[MT7].3b4_1.heavy 496.624 / 569.341 3546.0 32.93869972229004 43 17 10 6 10 3.0920605901635554 26.610645493270507 0.03800201416015625 3 0.9729876163202305 7.492011345291554 3546.0 10.241552795031055 0.0 - - - - - - - 235.30769230769232 7 13 UBE3A ubiquitin protein ligase E3A 1577 200 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7137.[MT7]-VDPLETELGVK[MT7].3b5_1.heavy 496.624 / 698.384 2901.0 32.93869972229004 43 17 10 6 10 3.0920605901635554 26.610645493270507 0.03800201416015625 3 0.9729876163202305 7.492011345291554 2901.0 7.623558139534884 0.0 - - - - - - - 232.55555555555554 5 9 UBE3A ubiquitin protein ligase E3A 1579 200 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7137.[MT7]-VDPLETELGVK[MT7].3y4_1.heavy 496.624 / 560.389 4996.0 32.93869972229004 43 17 10 6 10 3.0920605901635554 26.610645493270507 0.03800201416015625 3 0.9729876163202305 7.492011345291554 4996.0 37.30365910732341 0.0 - - - - - - - 178.88888888888889 9 9 UBE3A ubiquitin protein ligase E3A 1581 200 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7137.[MT7]-VDPLETELGVK[MT7].3b7_1.heavy 496.624 / 928.474 1128.0 32.93869972229004 43 17 10 6 10 3.0920605901635554 26.610645493270507 0.03800201416015625 3 0.9729876163202305 7.492011345291554 1128.0 9.808695652173913 0.0 - - - - - - - 241.5 2 2 UBE3A ubiquitin protein ligase E3A 1583 201 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7136.[MT7]-GAPNNSC[CAM]SEIK[MT7].2y4_1.heavy 732.871 / 620.374 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 1585 201 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7136.[MT7]-GAPNNSC[CAM]SEIK[MT7].2y9_1.heavy 732.871 / 1192.57 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 1587 201 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7136.[MT7]-GAPNNSC[CAM]SEIK[MT7].2y6_1.heavy 732.871 / 867.436 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 1589 201 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7136.[MT7]-GAPNNSC[CAM]SEIK[MT7].2b9_1.heavy 732.871 / 1061.44 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 1591 202 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 ENO_ECO24.IQLVGDDLFVTNTK.2y8.peptide 781.92 / 937.5 187609.0 36.523399353027344 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 187609.0 129.21482169220403 0.0 - - - - - - - 781.5 375 2 1593 202 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 ENO_ECO24.IQLVGDDLFVTNTK.2y6.peptide 781.92 / 709.39 368085.0 36.523399353027344 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 368085.0 124.01047105729599 0.0 - - - - - - - 1661.0 736 2 1595 202 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 ENO_ECO24.IQLVGDDLFVTNTK.2y5.peptide 781.92 / 562.32 421631.0 36.523399353027344 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 421631.0 128.9122553937285 0.0 - - - - - - - 1759.0 843 1 1597 203 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7127.[MT7]-MDNNAAAIK[MT7].2y4_1.heavy 618.336 / 546.373 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 1599 203 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7127.[MT7]-MDNNAAAIK[MT7].2b6_1.heavy 618.336 / 761.337 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 1601 203 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7127.[MT7]-MDNNAAAIK[MT7].2b7_1.heavy 618.336 / 832.374 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 1603 203 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7127.[MT7]-MDNNAAAIK[MT7].2b5_1.heavy 618.336 / 690.3 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 1605 204 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7128.[MT7]-LC[CAM]DPHPSK[MT7].3y3_1.heavy 414.557 / 475.3 26233.0 18.187400817871094 50 20 10 10 10 106.80498068181866 0.9362859237614463 0.0 3 0.9999010551467391 124.0686864852215 26233.0 73.49200874142363 0.0 - - - - - - - 227.5 52 8 UBE3A ubiquitin protein ligase E3A 1607 204 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7128.[MT7]-LC[CAM]DPHPSK[MT7].3b4_1.heavy 414.557 / 630.304 1275.0 18.187400817871094 50 20 10 10 10 106.80498068181866 0.9362859237614463 0.0 3 0.9999010551467391 124.0686864852215 1275.0 5.4293784458506495 2.0 - - - - - - - 260.0 3 7 UBE3A ubiquitin protein ligase E3A 1609 204 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7128.[MT7]-LC[CAM]DPHPSK[MT7].3b3_1.heavy 414.557 / 533.251 19675.0 18.187400817871094 50 20 10 10 10 106.80498068181866 0.9362859237614463 0.0 3 0.9999010551467391 124.0686864852215 19675.0 63.66499085923218 0.0 - - - - - - - 242.66666666666666 39 9 UBE3A ubiquitin protein ligase E3A 1611 204 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7128.[MT7]-LC[CAM]DPHPSK[MT7].3b2_1.heavy 414.557 / 418.224 2368.0 18.187400817871094 50 20 10 10 10 106.80498068181866 0.9362859237614463 0.0 3 0.9999010551467391 124.0686864852215 2368.0 7.351208791208791 1.0 - - - - - - - 297.8181818181818 4 11 UBE3A ubiquitin protein ligase E3A 1613 205 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7129.[MT7]-NLGLYYDNR.2y8_1.heavy 636.329 / 1013.51 2378.0 28.216699600219727 39 16 10 5 8 9.696709716651023 10.312776490388458 0.0447998046875 4 0.9646141741008392 6.541218490118021 2378.0 9.71166386554622 1.0 - - - - - - - 306.0 4 7 UBE3A ubiquitin protein ligase E3A 1615 205 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7129.[MT7]-NLGLYYDNR.2y5_1.heavy 636.329 / 730.315 3091.0 28.216699600219727 39 16 10 5 8 9.696709716651023 10.312776490388458 0.0447998046875 4 0.9646141741008392 6.541218490118021 3091.0 4.081919899230344 1.0 - - - - - - - 327.25 6 8 UBE3A ubiquitin protein ligase E3A 1617 205 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7129.[MT7]-NLGLYYDNR.2b4_1.heavy 636.329 / 542.342 4755.0 28.216699600219727 39 16 10 5 8 9.696709716651023 10.312776490388458 0.0447998046875 4 0.9646141741008392 6.541218490118021 4755.0 9.193024644677045 0.0 - - - - - - - 411.09090909090907 9 11 UBE3A ubiquitin protein ligase E3A 1619 205 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7129.[MT7]-NLGLYYDNR.2y7_1.heavy 636.329 / 900.421 4993.0 28.216699600219727 39 16 10 5 8 9.696709716651023 10.312776490388458 0.0447998046875 4 0.9646141741008392 6.541218490118021 4993.0 8.813293778402866 0.0 - - - - - - - 290.8888888888889 9 9 UBE3A ubiquitin protein ligase E3A 1621 206 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9780.[MT7]-SPGEK[MT7].2y4_1.heavy 403.237 / 574.332 2086.0 16.902600288391113 19 -2 10 5 6 0.1528856212979246 218.02791557734167 0.04559898376464844 5 0.12497233811028839 1.2074255465465225 2086.0 7.215575569940894 3.0 - - - - - - - 739.4545454545455 39 11 STAG1;E2F1;E2F2;ZNF449;BRAP stromal antigen 1;E2F transcription factor 1;E2F transcription factor 2;zinc finger protein 449;BRCA1 associated protein 1623 206 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9780.[MT7]-SPGEK[MT7].2b4_1.heavy 403.237 / 515.258 29903.0 16.902600288391113 19 -2 10 5 6 0.1528856212979246 218.02791557734167 0.04559898376464844 5 0.12497233811028839 1.2074255465465225 29903.0 35.00939746748802 1.0 - - - - - - - 764.75 59 8 STAG1;E2F1;E2F2;ZNF449;BRAP stromal antigen 1;E2F transcription factor 1;E2F transcription factor 2;zinc finger protein 449;BRCA1 associated protein 1625 206 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9780.[MT7]-SPGEK[MT7].2y3_1.heavy 403.237 / 477.279 1321.0 16.902600288391113 19 -2 10 5 6 0.1528856212979246 218.02791557734167 0.04559898376464844 5 0.12497233811028839 1.2074255465465225 1321.0 3.183465908797046 19.0 - - - - - - - 238.62857142857143 11 35 STAG1;E2F1;E2F2;ZNF449;BRAP stromal antigen 1;E2F transcription factor 1;E2F transcription factor 2;zinc finger protein 449;BRCA1 associated protein 1627 206 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9780.[MT7]-SPGEK[MT7].2y2_1.heavy 403.237 / 420.258 7789.0 16.902600288391113 19 -2 10 5 6 0.1528856212979246 218.02791557734167 0.04559898376464844 5 0.12497233811028839 1.2074255465465225 7789.0 2.4194542373900028 0.0 - - - - - - - 625.7142857142857 15 7 STAG1;E2F1;E2F2;ZNF449;BRAP stromal antigen 1;E2F transcription factor 1;E2F transcription factor 2;zinc finger protein 449;BRCA1 associated protein 1629 207 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9781.[MT7]-IEMFR.2b3_1.heavy 420.232 / 518.276 7031.0 30.260000228881836 43 15 10 10 8 1.8344215466951597 42.739964866445774 0.0 4 0.9517754786565992 5.597156682513661 7031.0 27.04126908338643 0.0 - - - - - - - 342.0 14 4 STAG1 stromal antigen 1 1631 207 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9781.[MT7]-IEMFR.2y4_1.heavy 420.232 / 582.27 11132.0 30.260000228881836 43 15 10 10 8 1.8344215466951597 42.739964866445774 0.0 4 0.9517754786565992 5.597156682513661 11132.0 37.7862035735796 0.0 - - - - - - - 293.0 22 4 STAG1 stromal antigen 1 1633 207 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9781.[MT7]-IEMFR.2b4_1.heavy 420.232 / 665.345 3516.0 30.260000228881836 43 15 10 10 8 1.8344215466951597 42.739964866445774 0.0 4 0.9517754786565992 5.597156682513661 3516.0 22.787479834743266 0.0 - - - - - - - 260.3333333333333 7 9 STAG1 stromal antigen 1 1635 207 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9781.[MT7]-IEMFR.2y3_1.heavy 420.232 / 453.228 3906.0 30.260000228881836 43 15 10 10 8 1.8344215466951597 42.739964866445774 0.0 4 0.9517754786565992 5.597156682513661 3906.0 -0.3557104285518008 2.0 - - - - - - - 325.6666666666667 8 6 STAG1 stromal antigen 1 1637 208 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9782.[MT7]-ETLSK[MT7].2y4_1.heavy 433.265 / 592.379 4253.0 17.830799102783203 39 15 10 10 4 1.1875160602896995 52.270776994558986 0.0 9 0.9544978483750373 5.763492242207512 4253.0 10.195347147841396 4.0 - - - - - - - 683.7142857142857 8 7 STAG1;KIAA1244;WDR87 stromal antigen 1;KIAA1244;WD repeat domain 87 1639 208 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9782.[MT7]-ETLSK[MT7].2b3_1.heavy 433.265 / 488.284 1772.0 17.830799102783203 39 15 10 10 4 1.1875160602896995 52.270776994558986 0.0 9 0.9544978483750373 5.763492242207512 1772.0 2.8611299435028243 8.0 - - - - - - - 221.25 4 8 STAG1;KIAA1244;WDR87 stromal antigen 1;KIAA1244;WD repeat domain 87 1641 208 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9782.[MT7]-ETLSK[MT7].2b4_1.heavy 433.265 / 575.316 1240.0 17.830799102783203 39 15 10 10 4 1.1875160602896995 52.270776994558986 0.0 9 0.9544978483750373 5.763492242207512 1240.0 3.030842628678941 18.0 - - - - - - - 227.57142857142858 4 7 STAG1;KIAA1244;WDR87 stromal antigen 1;KIAA1244;WD repeat domain 87 1643 208 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9782.[MT7]-ETLSK[MT7].2y3_1.heavy 433.265 / 491.331 1595.0 17.830799102783203 39 15 10 10 4 1.1875160602896995 52.270776994558986 0.0 9 0.9544978483750373 5.763492242207512 1595.0 3.248963105763689 5.0 - - - - - - - 650.0 4 9 STAG1;KIAA1244;WDR87 stromal antigen 1;KIAA1244;WD repeat domain 87 1645 209 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 RBSB_ECOLI.LAATIAQLPDQIGAK.3y7.peptide 503.96 / 728.39 188815.0 31.5935001373291 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 188815.0 171.1147414510457 0.0 - - - - - - - 266.0 377 2 1647 209 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 RBSB_ECOLI.LAATIAQLPDQIGAK.3y6.peptide 503.96 / 631.34 26948.0 31.5935001373291 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 26948.0 87.56459091390448 0.0 - - - - - - - 266.0 53 6 1649 209 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 RBSB_ECOLI.LAATIAQLPDQIGAK.3y5.peptide 503.96 / 516.31 24821.0 31.5935001373291 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 24821.0 60.96385964912281 0.0 - - - - - - - 633.1428571428571 49 7 1651 210 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9783.[MT7]-GIFVHR.2y4_1.heavy 436.765 / 558.315 3526.0 22.8971004486084 28 12 0 10 6 0.9802127147271014 68.01244838496834 0.0 6 0.8833669888753896 3.577974665235492 3526.0 15.853007936507938 1.0 - - - - - - - 252.0 18 4 STAG1 stromal antigen 1 1653 210 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9783.[MT7]-GIFVHR.2b3_1.heavy 436.765 / 462.283 2519.0 22.8971004486084 28 12 0 10 6 0.9802127147271014 68.01244838496834 0.0 6 0.8833669888753896 3.577974665235492 2519.0 5.0170086642181975 2.0 - - - - - - - 576.0 5 7 STAG1 stromal antigen 1 1655 210 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9783.[MT7]-GIFVHR.2y5_1.heavy 436.765 / 671.399 2267.0 22.8971004486084 28 12 0 10 6 0.9802127147271014 68.01244838496834 0.0 6 0.8833669888753896 3.577974665235492 2267.0 9.715714285714284 3.0 - - - - - - - 252.0 4 3 STAG1 stromal antigen 1 1657 210 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9783.[MT7]-GIFVHR.2b4_1.heavy 436.765 / 561.352 3778.0 22.8971004486084 28 12 0 10 6 0.9802127147271014 68.01244838496834 0.0 6 0.8833669888753896 3.577974665235492 3778.0 5.197367709114435 1.0 - - - - - - - 252.0 25 4 STAG1 stromal antigen 1 1659 211 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9784.[MT7]-TQIDDR.2b3_1.heavy 446.236 / 487.3 2248.0 15.788700103759766 48 18 10 10 10 5.076749327212115 19.697643817863028 0.0 3 0.9816629780416336 9.099805000263233 2248.0 3.6396788846430472 4.0 - - - - - - - 677.5 34 8 STAG1 stromal antigen 1 1661 211 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9784.[MT7]-TQIDDR.2y5_1.heavy 446.236 / 646.315 4627.0 15.788700103759766 48 18 10 10 10 5.076749327212115 19.697643817863028 0.0 3 0.9816629780416336 9.099805000263233 4627.0 19.74045276292335 0.0 - - - - - - - 694.0 9 8 STAG1 stromal antigen 1 1663 211 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9784.[MT7]-TQIDDR.2b4_1.heavy 446.236 / 602.327 19038.0 15.788700103759766 48 18 10 10 10 5.076749327212115 19.697643817863028 0.0 3 0.9816629780416336 9.099805000263233 19038.0 43.741607102208064 0.0 - - - - - - - 717.5714285714286 38 7 STAG1 stromal antigen 1 1665 211 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9784.[MT7]-TQIDDR.2b5_1.heavy 446.236 / 717.354 3702.0 15.788700103759766 48 18 10 10 10 5.076749327212115 19.697643817863028 0.0 3 0.9816629780416336 9.099805000263233 3702.0 5.746855108342471 1.0 - - - - - - - 234.88888888888889 7 9 STAG1 stromal antigen 1 1667 212 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9785.[MT7]-IQC[CAM]AK[MT7].2b3_1.heavy 454.267 / 546.283 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1;STAG2 stromal antigen 1;stromal antigen 2 1669 212 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9785.[MT7]-IQC[CAM]AK[MT7].2y4_1.heavy 454.267 / 650.341 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1;STAG2 stromal antigen 1;stromal antigen 2 1671 212 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9785.[MT7]-IQC[CAM]AK[MT7].2b4_1.heavy 454.267 / 617.32 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1;STAG2 stromal antigen 1;stromal antigen 2 1673 212 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9785.[MT7]-IQC[CAM]AK[MT7].2y3_1.heavy 454.267 / 522.283 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1;STAG2 stromal antigen 1;stromal antigen 2 1675 213 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6974.[MT7]-TTTWEDPR.2b4_1.heavy 575.286 / 634.332 6691.0 22.58692455291748 46 20 10 6 10 5.361045759532436 18.653077120670112 0.039699554443359375 3 0.9904241505333307 12.6016247484058 6691.0 30.69603243709515 0.0 - - - - - - - 283.42857142857144 13 7 NEDD4L;NEDD4 neural precursor cell expressed, developmentally down-regulated 4-like;neural precursor cell expressed, developmentally down-regulated 4 1677 213 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6974.[MT7]-TTTWEDPR.2b6_1.heavy 575.286 / 878.401 87968.0 22.58692455291748 46 20 10 6 10 5.361045759532436 18.653077120670112 0.039699554443359375 3 0.9904241505333307 12.6016247484058 87968.0 147.97868874819693 0.0 - - - - - - - 248.0 175 3 NEDD4L;NEDD4 neural precursor cell expressed, developmentally down-regulated 4-like;neural precursor cell expressed, developmentally down-regulated 4 1679 213 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6974.[MT7]-TTTWEDPR.2b5_1.heavy 575.286 / 763.374 9912.0 22.58692455291748 46 20 10 6 10 5.361045759532436 18.653077120670112 0.039699554443359375 3 0.9904241505333307 12.6016247484058 9912.0 6.311390134529148 0.0 - - - - - - - 403.0 19 8 NEDD4L;NEDD4 neural precursor cell expressed, developmentally down-regulated 4-like;neural precursor cell expressed, developmentally down-regulated 4 1681 213 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6974.[MT7]-TTTWEDPR.2y7_1.heavy 575.286 / 904.416 3717.0 22.58692455291748 46 20 10 6 10 5.361045759532436 18.653077120670112 0.039699554443359375 3 0.9904241505333307 12.6016247484058 3717.0 15.534726457399103 1.0 - - - - - - - 248.0 7 4 NEDD4L;NEDD4 neural precursor cell expressed, developmentally down-regulated 4-like;neural precursor cell expressed, developmentally down-regulated 4 1683 214 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9786.[MT7]-FVVEK[MT7].2b3_1.heavy 455.286 / 490.315 6010.0 25.05030059814453 34 14 4 10 6 1.8411129119550034 44.9205757651341 0.0 5 0.9402437485765628 5.023240313519091 6010.0 11.951784494868692 0.0 - - - - - - - 523.0 12 7 STAG1;PHB stromal antigen 1;prohibitin 1685 214 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9786.[MT7]-FVVEK[MT7].2y4_1.heavy 455.286 / 618.394 20382.0 25.05030059814453 34 14 4 10 6 1.8411129119550034 44.9205757651341 0.0 5 0.9402437485765628 5.023240313519091 20382.0 14.252742477208942 1.0 - - - - - - - 261.0 70 1 STAG1;PHB stromal antigen 1;prohibitin 1687 214 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9786.[MT7]-FVVEK[MT7].2y3_1.heavy 455.286 / 519.326 10452.0 25.05030059814453 34 14 4 10 6 1.8411129119550034 44.9205757651341 0.0 5 0.9402437485765628 5.023240313519091 10452.0 0.9568747723915607 2.0 - - - - - - - 261.0 26 3 STAG1;PHB stromal antigen 1;prohibitin 1689 214 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9786.[MT7]-FVVEK[MT7].2y1_1.heavy 455.286 / 291.215 N/A 25.05030059814453 34 14 4 10 6 1.8411129119550034 44.9205757651341 0.0 5 0.9402437485765628 5.023240313519091 20643.0 7.621295652807309 4.0 - - - - - - - 1045.0 60 1 STAG1;PHB stromal antigen 1;prohibitin 1691 215 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6975.[MT7]-ITQWEDPR.2b4_1.heavy 594.81 / 673.379 3987.0 27.063800811767578 47 17 10 10 10 7.469501698162484 13.387773915976249 0.0 3 0.9767981028239324 8.086439121968711 3987.0 3.093178170144462 1.0 - - - - - - - 298.8 7 5 NEDD4L;ITCH neural precursor cell expressed, developmentally down-regulated 4-like;itchy E3 ubiquitin protein ligase homolog (mouse) 1693 215 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6975.[MT7]-ITQWEDPR.2b6_1.heavy 594.81 / 917.448 25666.0 27.063800811767578 47 17 10 10 10 7.469501698162484 13.387773915976249 0.0 3 0.9767981028239324 8.086439121968711 25666.0 46.26023909971188 1.0 - - - - - - - 426.85714285714283 82 7 NEDD4L;ITCH neural precursor cell expressed, developmentally down-regulated 4-like;itchy E3 ubiquitin protein ligase homolog (mouse) 1695 215 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6975.[MT7]-ITQWEDPR.2b5_1.heavy 594.81 / 802.422 4984.0 27.063800811767578 47 17 10 10 10 7.469501698162484 13.387773915976249 0.0 3 0.9767981028239324 8.086439121968711 4984.0 7.59951200759469 0.0 - - - - - - - 841.375 9 8 NEDD4L;ITCH neural precursor cell expressed, developmentally down-regulated 4-like;itchy E3 ubiquitin protein ligase homolog (mouse) 1697 215 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6975.[MT7]-ITQWEDPR.2y7_1.heavy 594.81 / 931.427 2492.0 27.063800811767578 47 17 10 10 10 7.469501698162484 13.387773915976249 0.0 3 0.9767981028239324 8.086439121968711 2492.0 3.2246120460441854 2.0 - - - - - - - 466.875 4 8 NEDD4L;ITCH neural precursor cell expressed, developmentally down-regulated 4-like;itchy E3 ubiquitin protein ligase homolog (mouse) 1699 216 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9787.[MT7]-ELFPK[MT7].2y4_1.heavy 461.286 / 648.42 5376.0 27.359600067138672 38 17 10 5 6 4.246399871404165 23.5493601705797 0.04579925537109375 6 0.9731911579115147 7.5205273128466725 5376.0 9.805766937790382 3.0 - - - - - - - 391.0 26 5 STAG1;ZNF582 stromal antigen 1;zinc finger protein 582 1701 216 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9787.[MT7]-ELFPK[MT7].2b3_1.heavy 461.286 / 534.304 7087.0 27.359600067138672 38 17 10 5 6 4.246399871404165 23.5493601705797 0.04579925537109375 6 0.9731911579115147 7.5205273128466725 7087.0 5.55814709657159 2.0 - - - - - - - 366.5 14 8 STAG1;ZNF582 stromal antigen 1;zinc finger protein 582 1703 216 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9787.[MT7]-ELFPK[MT7].2y3_1.heavy 461.286 / 535.336 10263.0 27.359600067138672 38 17 10 5 6 4.246399871404165 23.5493601705797 0.04579925537109375 6 0.9731911579115147 7.5205273128466725 10263.0 7.068601759130015 3.0 - - - - - - - 325.6666666666667 46 3 STAG1;ZNF582 stromal antigen 1;zinc finger protein 582 1705 216 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9787.[MT7]-ELFPK[MT7].2y2_1.heavy 461.286 / 388.268 28591.0 27.359600067138672 38 17 10 5 6 4.246399871404165 23.5493601705797 0.04579925537109375 6 0.9731911579115147 7.5205273128466725 28591.0 14.923876602245707 0.0 - - - - - - - 427.75 57 4 STAG1;ZNF582 stromal antigen 1;zinc finger protein 582 1707 217 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6976.[MT7]-ELALVQTK[MT7].2y4_1.heavy 595.373 / 619.39 32376.0 27.290800094604492 50 20 10 10 10 16.341011530472304 6.119572207235919 0.0 3 0.9962389053409711 20.117269099669876 32376.0 70.970179668663 0.0 - - - - - - - 339.625 64 8 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1709 217 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6976.[MT7]-ELALVQTK[MT7].2y5_1.heavy 595.373 / 732.474 18289.0 27.290800094604492 50 20 10 10 10 16.341011530472304 6.119572207235919 0.0 3 0.9962389053409711 20.117269099669876 18289.0 16.913969223453474 0.0 - - - - - - - 388.14285714285717 36 7 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1711 217 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6976.[MT7]-ELALVQTK[MT7].2b4_1.heavy 595.373 / 571.357 29658.0 27.290800094604492 50 20 10 10 10 16.341011530472304 6.119572207235919 0.0 3 0.9962389053409711 20.117269099669876 29658.0 64.21167097178272 0.0 - - - - - - - 345.8 59 5 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1713 217 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6976.[MT7]-ELALVQTK[MT7].2y6_1.heavy 595.373 / 803.511 15076.0 27.290800094604492 50 20 10 10 10 16.341011530472304 6.119572207235919 0.0 3 0.9962389053409711 20.117269099669876 15076.0 17.37952284953752 0.0 - - - - - - - 345.8 30 5 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1715 218 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6972.[MT7]-QHSIYK[MT7].3y3_1.heavy 355.209 / 567.362 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1717 218 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6972.[MT7]-QHSIYK[MT7].3b3_1.heavy 355.209 / 497.259 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1719 218 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6972.[MT7]-QHSIYK[MT7].3b2_1.heavy 355.209 / 410.227 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1721 218 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6972.[MT7]-QHSIYK[MT7].3y2_1.heavy 355.209 / 454.278 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1723 219 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6971.[MT7]-DFLLRPR.3y6_2.heavy 354.218 / 401.258 32128.0 27.750600814819336 40 10 10 10 10 0.721831634942773 79.55269597575523 0.0 3 0.8423972283552776 3.066932759446946 32128.0 77.23109285152402 0.0 - - - - - - - 402.6666666666667 64 3 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1725 219 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6971.[MT7]-DFLLRPR.3b4_1.heavy 354.218 / 633.373 2899.0 27.750600814819336 40 10 10 10 10 0.721831634942773 79.55269597575523 0.0 3 0.8423972283552776 3.066932759446946 2899.0 23.35971074380165 0.0 - - - - - - - 338.4 5 5 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1727 219 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6971.[MT7]-DFLLRPR.3b3_1.heavy 354.218 / 520.289 31886.0 27.750600814819336 40 10 10 10 10 0.721831634942773 79.55269597575523 0.0 3 0.8423972283552776 3.066932759446946 31886.0 172.66237195782273 0.0 - - - - - - - 362.5 63 4 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1729 219 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6971.[MT7]-DFLLRPR.3b2_1.heavy 354.218 / 407.205 19566.0 27.750600814819336 40 10 10 10 10 0.721831634942773 79.55269597575523 0.0 3 0.8423972283552776 3.066932759446946 19566.0 59.427167701863354 0.0 - - - - - - - 402.6666666666667 39 6 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1731 220 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7121.[MT7]-ALELYK[MT7].2y4_1.heavy 512.818 / 696.405 16497.0 28.016199111938477 50 20 10 10 10 9.64775330610435 10.365107484322568 0.0 3 0.996883411538304 22.100891012613918 16497.0 24.67647489539749 0.0 - - - - - - - 358.5 32 4 UBE3A ubiquitin protein ligase E3A 1733 220 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7121.[MT7]-ALELYK[MT7].2y5_1.heavy 512.818 / 809.489 20801.0 28.016199111938477 50 20 10 10 10 9.64775330610435 10.365107484322568 0.0 3 0.996883411538304 22.100891012613918 20801.0 83.69603699834397 0.0 - - - - - - - 239.0 41 5 UBE3A ubiquitin protein ligase E3A 1735 220 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7121.[MT7]-ALELYK[MT7].2b4_1.heavy 512.818 / 571.357 12193.0 28.016199111938477 50 20 10 10 10 9.64775330610435 10.365107484322568 0.0 3 0.996883411538304 22.100891012613918 12193.0 25.50481302756841 0.0 - - - - - - - 358.5 24 6 UBE3A ubiquitin protein ligase E3A 1737 220 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7121.[MT7]-ALELYK[MT7].2y3_1.heavy 512.818 / 567.362 23192.0 28.016199111938477 50 20 10 10 10 9.64775330610435 10.365107484322568 0.0 3 0.996883411538304 22.100891012613918 23192.0 102.00468636744407 0.0 - - - - - - - 286.8 46 5 UBE3A ubiquitin protein ligase E3A 1739 221 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7120.[MT7]-YNADQIR.2y5_1.heavy 512.271 / 602.326 1139.0 20.68589973449707 44 14 10 10 10 1.077481607133031 60.970176352417475 0.0 3 0.9358361012420686 4.845817102570835 1139.0 0.46453575909661227 21.0 - - - - - - - 292.85714285714283 5 7 UBE3A ubiquitin protein ligase E3A 1741 221 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7120.[MT7]-YNADQIR.2b4_1.heavy 512.271 / 608.28 2505.0 20.68589973449707 44 14 10 10 10 1.077481607133031 60.970176352417475 0.0 3 0.9358361012420686 4.845817102570835 2505.0 8.677723360095248 0.0 - - - - - - - 325.2857142857143 5 7 UBE3A ubiquitin protein ligase E3A 1743 221 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7120.[MT7]-YNADQIR.2y6_1.heavy 512.271 / 716.369 4555.0 20.68589973449707 44 14 10 10 10 1.077481607133031 60.970176352417475 0.0 3 0.9358361012420686 4.845817102570835 4555.0 27.969298245614034 1.0 - - - - - - - 256.375 9 8 UBE3A ubiquitin protein ligase E3A 1745 221 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7120.[MT7]-YNADQIR.2b5_1.heavy 512.271 / 736.338 3188.0 20.68589973449707 44 14 10 10 10 1.077481607133031 60.970176352417475 0.0 3 0.9358361012420686 4.845817102570835 3188.0 10.720087912087912 0.0 - - - - - - - 278.44444444444446 6 9 UBE3A ubiquitin protein ligase E3A 1747 222 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7126.[MT7]-VISNEFNSR.2y4_1.heavy 605.321 / 523.262 2089.0 25.093299865722656 44 18 10 10 6 6.206721406796986 16.111565743951374 0.0 5 0.9890249703482061 11.769594964897417 2089.0 3.7351213282247766 6.0 - - - - - - - 638.0 8 9 UBE3A ubiquitin protein ligase E3A 1749 222 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7126.[MT7]-VISNEFNSR.2y8_1.heavy 605.321 / 966.464 6006.0 25.093299865722656 44 18 10 10 6 6.206721406796986 16.111565743951374 0.0 5 0.9890249703482061 11.769594964897417 6006.0 12.19609195402299 1.0 - - - - - - - 652.5 12 8 UBE3A ubiquitin protein ligase E3A 1751 222 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7126.[MT7]-VISNEFNSR.2y6_1.heavy 605.321 / 766.348 2089.0 25.093299865722656 44 18 10 10 6 6.206721406796986 16.111565743951374 0.0 5 0.9890249703482061 11.769594964897417 2089.0 5.562662835249043 1.0 - - - - - - - 261.0 4 6 UBE3A ubiquitin protein ligase E3A 1753 222 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7126.[MT7]-VISNEFNSR.2y7_1.heavy 605.321 / 853.38 4700.0 25.093299865722656 44 18 10 10 6 6.206721406796986 16.111565743951374 0.0 5 0.9890249703482061 11.769594964897417 4700.0 12.026388668861077 0.0 - - - - - - - 261.0 9 3 UBE3A ubiquitin protein ligase E3A 1755 223 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7125.[MT7]-EDYSPLIR.2y5_1.heavy 568.807 / 585.372 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 1757 223 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7125.[MT7]-EDYSPLIR.2b4_1.heavy 568.807 / 639.274 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 1759 223 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7125.[MT7]-EDYSPLIR.2y6_1.heavy 568.807 / 748.435 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 1761 223 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7125.[MT7]-EDYSPLIR.2y7_1.heavy 568.807 / 863.462 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 1763 224 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7124.[MT7]-DYTFFK[MT7].2b3_1.heavy 554.799 / 524.247 3231.0 31.67490005493164 40 20 2 10 8 17.399319525079427 5.747351202778921 0.0 4 0.9945784896764764 16.753510373450084 3231.0 1.9873914918504427 4.0 - - - - - - - 277.6363636363636 12 11 NCKAP5;UBE3A NCK-associated protein 5;ubiquitin protein ligase E3A 1765 224 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7124.[MT7]-DYTFFK[MT7].2y4_1.heavy 554.799 / 686.399 6642.0 31.67490005493164 40 20 2 10 8 17.399319525079427 5.747351202778921 0.0 4 0.9945784896764764 16.753510373450084 6642.0 16.089346618363727 3.0 - - - - - - - 279.44444444444446 50 9 NCKAP5;UBE3A NCK-associated protein 5;ubiquitin protein ligase E3A 1767 224 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7124.[MT7]-DYTFFK[MT7].2y5_1.heavy 554.799 / 849.463 7001.0 31.67490005493164 40 20 2 10 8 17.399319525079427 5.747351202778921 0.0 4 0.9945784896764764 16.753510373450084 7001.0 26.12463015695009 1.0 - - - - - - - 323.2 14 10 NCKAP5;UBE3A NCK-associated protein 5;ubiquitin protein ligase E3A 1769 224 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7124.[MT7]-DYTFFK[MT7].2y3_1.heavy 554.799 / 585.352 8437.0 31.67490005493164 40 20 2 10 8 17.399319525079427 5.747351202778921 0.0 4 0.9945784896764764 16.753510373450084 8437.0 15.032516703786193 0.0 - - - - - - - 744.0 16 7 NCKAP5;UBE3A NCK-associated protein 5;ubiquitin protein ligase E3A 1771 225 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7123.[MT7]-LPLAAQGK[MT7].2y4_1.heavy 543.35 / 547.332 10145.0 25.3966007232666 40 20 2 10 8 14.467344966455656 6.912118307254198 0.0 4 0.99850757543211 31.942003100051338 10145.0 21.582020062070495 1.0 - - - - - - - 650.0 131 8 UBE3A ubiquitin protein ligase E3A 1773 225 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7123.[MT7]-LPLAAQGK[MT7].2y5_1.heavy 543.35 / 618.369 8844.0 25.3966007232666 40 20 2 10 8 14.467344966455656 6.912118307254198 0.0 4 0.99850757543211 31.942003100051338 8844.0 11.824128754277025 1.0 - - - - - - - 260.0 17 4 UBE3A ubiquitin protein ligase E3A 1775 225 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7123.[MT7]-LPLAAQGK[MT7].2y6_1.heavy 543.35 / 731.453 4422.0 25.3966007232666 40 20 2 10 8 14.467344966455656 6.912118307254198 0.0 4 0.99850757543211 31.942003100051338 4422.0 22.790307692307692 0.0 - - - - - - - 260.0 8 7 UBE3A ubiquitin protein ligase E3A 1777 225 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7123.[MT7]-LPLAAQGK[MT7].2y7_1.heavy 543.35 / 828.506 30435.0 25.3966007232666 40 20 2 10 8 14.467344966455656 6.912118307254198 0.0 4 0.99850757543211 31.942003100051338 30435.0 49.35285809337228 0.0 - - - - - - - 693.3333333333334 60 6 UBE3A ubiquitin protein ligase E3A 1779 226 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7118.[MT7]-LLSNEK[MT7].2y4_1.heavy 496.305 / 621.332 6448.0 22.537799835205078 41 15 10 10 6 3.745348015260334 26.69978853568542 0.0 6 0.9596230110715307 6.121011201944584 6448.0 26.433333333333334 0.0 - - - - - - - 779.4285714285714 12 7 UBE3A ubiquitin protein ligase E3A 1781 226 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7118.[MT7]-LLSNEK[MT7].2y5_1.heavy 496.305 / 734.417 12153.0 22.537799835205078 41 15 10 10 6 3.745348015260334 26.69978853568542 0.0 6 0.9596230110715307 6.121011201944584 12153.0 10.869985337243403 1.0 - - - - - - - 330.6666666666667 24 6 UBE3A ubiquitin protein ligase E3A 1783 226 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7118.[MT7]-LLSNEK[MT7].2y3_1.heavy 496.305 / 534.3 2976.0 22.537799835205078 41 15 10 10 6 3.745348015260334 26.69978853568542 0.0 6 0.9596230110715307 6.121011201944584 2976.0 -0.17142857142857137 5.0 - - - - - - - 454.6666666666667 8 6 UBE3A ubiquitin protein ligase E3A 1785 226 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7118.[MT7]-LLSNEK[MT7].2b5_1.heavy 496.305 / 701.395 1736.0 22.537799835205078 41 15 10 10 6 3.745348015260334 26.69978853568542 0.0 6 0.9596230110715307 6.121011201944584 1736.0 2.8291666666666666 16.0 - - - - - - - 814.8571428571429 5 7 UBE3A ubiquitin protein ligase E3A 1787 227 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7119.[MT7]-VETENK[MT7].2y4_1.heavy 504.284 / 635.348 5533.0 15.345966974894205 36 20 4 6 6 9.669662596562915 10.341622471454695 0.03730010986328125 5 0.9981047198873044 28.34373315694565 5533.0 55.914975530932594 0.0 - - - - - - - 240.6 11 10 UBE3A ubiquitin protein ligase E3A 1789 227 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7119.[MT7]-VETENK[MT7].2y5_1.heavy 504.284 / 764.391 N/A 15.345966974894205 36 20 4 6 6 9.669662596562915 10.341622471454695 0.03730010986328125 5 0.9981047198873044 28.34373315694565 5654.0 6.987019825086419 2.0 - - - - - - - 290.75 20 12 UBE3A ubiquitin protein ligase E3A 1791 227 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7119.[MT7]-VETENK[MT7].2b4_1.heavy 504.284 / 603.311 1083.0 15.345966974894205 36 20 4 6 6 9.669662596562915 10.341622471454695 0.03730010986328125 5 0.9981047198873044 28.34373315694565 1083.0 0.0 3.0 - - - - - - - 224.6 2 15 UBE3A ubiquitin protein ligase E3A 1793 227 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7119.[MT7]-VETENK[MT7].2y3_1.heavy 504.284 / 534.3 2045.0 15.345966974894205 36 20 4 6 6 9.669662596562915 10.341622471454695 0.03730010986328125 5 0.9981047198873044 28.34373315694565 2045.0 19.354059206877427 5.0 - - - - - - - 184.84615384615384 9 13 UBE3A ubiquitin protein ligase E3A 1795 228 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7117.[MT7]-AITYAK[MT7].2y4_1.heavy 477.797 / 626.363 6218.0 20.8617000579834 34 20 0 10 4 7.856951518853707 12.727582671222788 0.0 7 0.9936796556701054 15.51540061655709 6218.0 21.137620098508556 0.0 - - - - - - - 358.3333333333333 12 9 UBE3A ubiquitin protein ligase E3A 1797 228 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7117.[MT7]-AITYAK[MT7].2y5_1.heavy 477.797 / 739.447 2764.0 20.8617000579834 34 20 0 10 4 7.856951518853707 12.727582671222788 0.0 7 0.9936796556701054 15.51540061655709 2764.0 2.2285359801488833 5.0 - - - - - - - 789.5714285714286 173 7 UBE3A ubiquitin protein ligase E3A 1799 228 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7117.[MT7]-AITYAK[MT7].2b4_1.heavy 477.797 / 593.341 1151.0 20.8617000579834 34 20 0 10 4 7.856951518853707 12.727582671222788 0.0 7 0.9936796556701054 15.51540061655709 1151.0 1.5005801296168122 13.0 - - - - - - - 268.5 4 6 UBE3A ubiquitin protein ligase E3A 1801 228 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7117.[MT7]-AITYAK[MT7].2y3_1.heavy 477.797 / 525.315 4606.0 20.8617000579834 34 20 0 10 4 7.856951518853707 12.727582671222788 0.0 7 0.9936796556701054 15.51540061655709 4606.0 4.380672812085911 1.0 - - - - - - - 276.2 19 5 UBE3A ubiquitin protein ligase E3A 1803 229 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9790.[MT7]-QYEAER.2y4_1.heavy 470.236 / 504.241 1388.0 15.588399887084961 38 18 2 10 8 2.7550994700086626 27.709979183380526 0.0 4 0.9895674931249013 12.072292258042351 1388.0 1.9546876307349046 6.0 - - - - - - - 157.5 2 8 STAG1;STAG3;STAG2;STAG3L4 stromal antigen 1;stromal antigen 3;stromal antigen 2;stromal antigen 3-like 4 1805 229 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9790.[MT7]-QYEAER.2b3_1.heavy 470.236 / 565.274 2398.0 15.588399887084961 38 18 2 10 8 2.7550994700086626 27.709979183380526 0.0 4 0.9895674931249013 12.072292258042351 2398.0 5.94754617414248 0.0 - - - - - - - 252.25 4 12 STAG1;STAG3;STAG2;STAG3L4 stromal antigen 1;stromal antigen 3;stromal antigen 2;stromal antigen 3-like 4 1807 229 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9790.[MT7]-QYEAER.2y5_1.heavy 470.236 / 667.305 8709.0 15.588399887084961 38 18 2 10 8 2.7550994700086626 27.709979183380526 0.0 4 0.9895674931249013 12.072292258042351 8709.0 88.64563450182183 1.0 - - - - - - - 231.33333333333334 56 12 STAG1;STAG3;STAG2;STAG3L4 stromal antigen 1;stromal antigen 3;stromal antigen 2;stromal antigen 3-like 4 1809 229 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9790.[MT7]-QYEAER.2b4_1.heavy 470.236 / 636.311 2650.0 15.588399887084961 38 18 2 10 8 2.7550994700086626 27.709979183380526 0.0 4 0.9895674931249013 12.072292258042351 2650.0 19.96974697469747 0.0 - - - - - - - 201.8 5 5 STAG1;STAG3;STAG2;STAG3L4 stromal antigen 1;stromal antigen 3;stromal antigen 2;stromal antigen 3-like 4 1811 230 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9791.[MT7]-EDLLVLR.2y4_1.heavy 501.309 / 500.355 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1 stromal antigen 1 1813 230 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9791.[MT7]-EDLLVLR.2y5_1.heavy 501.309 / 613.44 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1 stromal antigen 1 1815 230 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9791.[MT7]-EDLLVLR.2b4_1.heavy 501.309 / 615.347 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1 stromal antigen 1 1817 230 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9791.[MT7]-EDLLVLR.2y6_1.heavy 501.309 / 728.466 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1 stromal antigen 1 1819 231 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9794.[MT7]-ITDGSPSK[MT7].2y4_1.heavy 546.811 / 562.332 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1 stromal antigen 1 1821 231 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9794.[MT7]-ITDGSPSK[MT7].2y5_1.heavy 546.811 / 619.353 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1 stromal antigen 1 1823 231 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9794.[MT7]-ITDGSPSK[MT7].2y6_1.heavy 546.811 / 734.38 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1 stromal antigen 1 1825 231 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9794.[MT7]-ITDGSPSK[MT7].2y7_1.heavy 546.811 / 835.428 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1 stromal antigen 1 1827 232 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9795.[MT7]-HLDALLK[MT7].3y3_1.heavy 366.569 / 517.383 2004.0 26.78112506866455 42 17 10 5 10 5.425518193733925 18.43141916204293 0.045101165771484375 3 0.9779861979273322 8.302615003863895 2004.0 11.784063745019921 0.0 - - - - - - - 251.0 4 2 STAG1 stromal antigen 1 1829 232 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9795.[MT7]-HLDALLK[MT7].3b4_1.heavy 366.569 / 581.316 10271.0 26.78112506866455 42 17 10 5 10 5.425518193733925 18.43141916204293 0.045101165771484375 3 0.9779861979273322 8.302615003863895 10271.0 79.75370119521912 0.0 - - - - - - - 251.0 20 5 STAG1 stromal antigen 1 1831 232 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9795.[MT7]-HLDALLK[MT7].3b5_1.heavy 366.569 / 694.4 501.0 26.78112506866455 42 17 10 5 10 5.425518193733925 18.43141916204293 0.045101165771484375 3 0.9779861979273322 8.302615003863895 501.0 2.197609561752988 3.0 - - - - - - - 251.0 2 2 STAG1 stromal antigen 1 1833 232 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9795.[MT7]-HLDALLK[MT7].3b3_1.heavy 366.569 / 510.279 8267.0 26.78112506866455 42 17 10 5 10 5.425518193733925 18.43141916204293 0.045101165771484375 3 0.9779861979273322 8.302615003863895 8267.0 47.11521413746213 0.0 - - - - - - - 251.0 16 5 STAG1 stromal antigen 1 1835 233 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6966.[MT7]-SC[CAM]IMLGR.2y5_1.heavy 490.761 / 589.349 N/A N/A - - - - - - - - - 0.0 - - - - - - - PIK3CA phosphoinositide-3-kinase, catalytic, alpha polypeptide 1837 233 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6966.[MT7]-SC[CAM]IMLGR.2b4_1.heavy 490.761 / 636.297 N/A N/A - - - - - - - - - 0.0 - - - - - - - PIK3CA phosphoinositide-3-kinase, catalytic, alpha polypeptide 1839 233 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6966.[MT7]-SC[CAM]IMLGR.2b2_1.heavy 490.761 / 392.172 N/A N/A - - - - - - - - - 0.0 - - - - - - - PIK3CA phosphoinositide-3-kinase, catalytic, alpha polypeptide 1841 233 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6966.[MT7]-SC[CAM]IMLGR.2y1_1.heavy 490.761 / 175.119 N/A N/A - - - - - - - - - 0.0 - - - - - - - PIK3CA phosphoinositide-3-kinase, catalytic, alpha polypeptide 1843 234 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9792.[MT7]-SRIEAGIR.2b4_1.heavy 523.315 / 630.369 7428.0 19.105600357055664 24 8 0 10 6 0.6323264525004598 90.92873510768274 0.0 5 0.7944133704870658 2.6737883610711735 7428.0 14.19891209458694 1.0 - - - - - - - 309.5 15 6 STAG1 stromal antigen 1 1845 234 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9792.[MT7]-SRIEAGIR.2b6_1.heavy 523.315 / 758.428 2476.0 19.105600357055664 24 8 0 10 6 0.6323264525004598 90.92873510768274 0.0 5 0.7944133704870658 2.6737883610711735 2476.0 10.095378941822837 3.0 - - - - - - - 229.0 42 9 STAG1 stromal antigen 1 1847 234 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9792.[MT7]-SRIEAGIR.2y6_1.heavy 523.315 / 658.388 3920.0 19.105600357055664 24 8 0 10 6 0.6323264525004598 90.92873510768274 0.0 5 0.7944133704870658 2.6737883610711735 3920.0 12.628330765279916 1.0 - - - - - - - 300.09090909090907 7 11 STAG1 stromal antigen 1 1849 234 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9792.[MT7]-SRIEAGIR.2b7_1.heavy 523.315 / 871.512 1857.0 19.105600357055664 24 8 0 10 6 0.6323264525004598 90.92873510768274 0.0 5 0.7944133704870658 2.6737883610711735 1857.0 2.5927855391120507 15.0 - - - - - - - 294.7142857142857 430 7 STAG1 stromal antigen 1 1851 235 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6967.[MT7]-RPDVLK[MT7].2b3_1.heavy 508.329 / 513.29 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1853 235 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6967.[MT7]-RPDVLK[MT7].2y5_1.heavy 508.329 / 715.447 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1855 235 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6967.[MT7]-RPDVLK[MT7].2y3_1.heavy 508.329 / 503.367 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1857 235 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6967.[MT7]-RPDVLK[MT7].2b5_1.heavy 508.329 / 725.443 N/A N/A - - - - - - - - - 0.0 - - - - - - - NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1859 236 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9793.[MT7]-YSADAEK[MT7].2y6_1.heavy 536.282 / 764.391 3480.0 17.45159912109375 50 20 10 10 10 8.093972593973046 12.354872572025046 0.0 3 0.9931570686906066 14.910538013838247 3480.0 7.448706698019441 0.0 - - - - - - - 284.0 6 7 STAG1 stromal antigen 1 1861 236 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9793.[MT7]-YSADAEK[MT7].2y4_1.heavy 536.282 / 606.321 1491.0 17.45159912109375 50 20 10 10 10 8.093972593973046 12.354872572025046 0.0 3 0.9931570686906066 14.910538013838247 1491.0 9.440521603028428 1.0 - - - - - - - 281.7 2 10 STAG1 stromal antigen 1 1863 236 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9793.[MT7]-YSADAEK[MT7].2y5_1.heavy 536.282 / 677.359 1160.0 17.45159912109375 50 20 10 10 10 8.093972593973046 12.354872572025046 0.0 3 0.9931570686906066 14.910538013838247 1160.0 6.9900629709169 5.0 - - - - - - - 354.85714285714283 4 7 STAG1 stromal antigen 1 1865 236 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9793.[MT7]-YSADAEK[MT7].2b4_1.heavy 536.282 / 581.269 3480.0 17.45159912109375 50 20 10 10 10 8.093972593973046 12.354872572025046 0.0 3 0.9931570686906066 14.910538013838247 3480.0 13.72394366197183 0.0 - - - - - - - 359.0 6 6 STAG1 stromal antigen 1 1867 237 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9798.[MT7]-EAVATLHK[MT7].3y3_1.heavy 386.236 / 541.358 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1 stromal antigen 1 1869 237 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9798.[MT7]-EAVATLHK[MT7].3b4_1.heavy 386.236 / 515.295 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1 stromal antigen 1 1871 237 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9798.[MT7]-EAVATLHK[MT7].3b5_1.heavy 386.236 / 616.342 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1 stromal antigen 1 1873 237 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9798.[MT7]-EAVATLHK[MT7].3y2_1.heavy 386.236 / 428.274 N/A N/A - - - - - - - - - 0.0 - - - - - - - STAG1 stromal antigen 1 1875 238 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6965.[MT7]-VNPSNHR.2y6_1.heavy 484.263 / 724.349 3135.0 13.380350112915039 37 20 0 7 10 18.829138695164726 5.3109173828370455 0.022699356079101562 3 0.9991598715040676 42.5754357941247 3135.0 6.2430322979785275 0.0 - - - - - - - 173.68 6 25 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1877 238 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6965.[MT7]-VNPSNHR.2y4_1.heavy 484.263 / 513.253 356.0 13.380350112915039 37 20 0 7 10 18.829138695164726 5.3109173828370455 0.022699356079101562 3 0.9991598715040676 42.5754357941247 356.0 0.0 36.0 - - - - - - - 166.92307692307693 29 26 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1879 238 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6965.[MT7]-VNPSNHR.2b5_1.heavy 484.263 / 656.348 570.0 13.380350112915039 37 20 0 7 10 18.829138695164726 5.3109173828370455 0.022699356079101562 3 0.9991598715040676 42.5754357941247 570.0 0.3971830985915493 2.0 - - - - - - - 0.0 1 0 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1881 238 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6965.[MT7]-VNPSNHR.2y5_1.heavy 484.263 / 610.306 3063.0 13.380350112915039 37 20 0 7 10 18.829138695164726 5.3109173828370455 0.022699356079101562 3 0.9991598715040676 42.5754357941247 3063.0 34.51267605633803 0.0 - - - - - - - 179.28 6 25 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 1883 239 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9799.[MT7]-ALQSLYTNR.2y8_1.heavy 605.339 / 994.532 5432.0 27.2677001953125 42 17 10 5 10 3.1247860838177517 25.684565850313184 0.046199798583984375 3 0.9769001455504518 8.104349715081796 5432.0 24.85085020242915 0.0 - - - - - - - 247.0 10 7 STAG1 stromal antigen 1 1885 239 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9799.[MT7]-ALQSLYTNR.2b4_1.heavy 605.339 / 544.321 2469.0 27.2677001953125 42 17 10 5 10 3.1247860838177517 25.684565850313184 0.046199798583984375 3 0.9769001455504518 8.104349715081796 2469.0 2.6776109085713546 7.0 - - - - - - - 352.85714285714283 10 7 STAG1 stromal antigen 1 1887 239 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9799.[MT7]-ALQSLYTNR.2y6_1.heavy 605.339 / 753.389 7408.0 27.2677001953125 42 17 10 5 10 3.1247860838177517 25.684565850313184 0.046199798583984375 3 0.9769001455504518 8.104349715081796 7408.0 8.34774628879892 0.0 - - - - - - - 329.3333333333333 14 6 STAG1 stromal antigen 1 1889 239 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9799.[MT7]-ALQSLYTNR.2y7_1.heavy 605.339 / 881.448 4445.0 27.2677001953125 42 17 10 5 10 3.1247860838177517 25.684565850313184 0.046199798583984375 3 0.9769001455504518 8.104349715081796 4445.0 35.45202429149798 0.0 - - - - - - - 247.0 8 8 STAG1 stromal antigen 1 1891 240 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9796.[MT7]-LELLLQK[MT7].2y4_1.heavy 572.881 / 645.442 18573.0 35.777400970458984 48 18 10 10 10 3.03800102571294 27.641192514466095 0.0 3 0.9819713008519892 9.177523943233902 18573.0 40.37608695652173 0.0 - - - - - - - 271.8 37 15 STAG1;STAG2 stromal antigen 1;stromal antigen 2 1893 240 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9796.[MT7]-LELLLQK[MT7].2b3_1.heavy 572.881 / 500.32 22330.0 35.777400970458984 48 18 10 10 10 3.03800102571294 27.641192514466095 0.0 3 0.9819713008519892 9.177523943233902 22330.0 31.94909263210012 0.0 - - - - - - - 751.3636363636364 44 11 STAG1;STAG2 stromal antigen 1;stromal antigen 2 1895 240 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9796.[MT7]-LELLLQK[MT7].2b4_1.heavy 572.881 / 613.404 19861.0 35.777400970458984 48 18 10 10 10 3.03800102571294 27.641192514466095 0.0 3 0.9819713008519892 9.177523943233902 19861.0 30.560595266144595 0.0 - - - - - - - 720.8571428571429 39 7 STAG1;STAG2 stromal antigen 1;stromal antigen 2 1897 240 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9796.[MT7]-LELLLQK[MT7].2y3_1.heavy 572.881 / 532.357 28020.0 35.777400970458984 48 18 10 10 10 3.03800102571294 27.641192514466095 0.0 3 0.9819713008519892 9.177523943233902 28020.0 26.209480503301357 0.0 - - - - - - - 715.6666666666666 56 9 STAG1;STAG2 stromal antigen 1;stromal antigen 2 1899 241 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6963.[MT7]-TLNPK[MT7].2y4_1.heavy 430.776 / 615.395 18142.0 17.964799880981445 31 15 0 10 6 3.081792195552841 32.44865119209021 0.0 6 0.9586302381151238 6.046612683106832 18142.0 126.50367567567568 0.0 - - - - - - - 231.25 36 8 NEDD4L;CCT6A neural precursor cell expressed, developmentally down-regulated 4-like;chaperonin containing TCP1, subunit 6A (zeta 1) 1901 241 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6963.[MT7]-TLNPK[MT7].2b3_1.heavy 430.776 / 473.284 19252.0 17.964799880981445 31 15 0 10 6 3.081792195552841 32.44865119209021 0.0 6 0.9586302381151238 6.046612683106832 19252.0 31.013015865886658 3.0 - - - - - - - 231.25 139 4 NEDD4L;CCT6A neural precursor cell expressed, developmentally down-regulated 4-like;chaperonin containing TCP1, subunit 6A (zeta 1) 1903 241 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6963.[MT7]-TLNPK[MT7].2y3_1.heavy 430.776 / 502.311 15920.0 17.964799880981445 31 15 0 10 6 3.081792195552841 32.44865119209021 0.0 6 0.9586302381151238 6.046612683106832 15920.0 27.592243402538095 0.0 - - - - - - - 687.2857142857143 31 7 NEDD4L;CCT6A neural precursor cell expressed, developmentally down-regulated 4-like;chaperonin containing TCP1, subunit 6A (zeta 1) 1905 241 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6963.[MT7]-TLNPK[MT7].2y2_1.heavy 430.776 / 388.268 55536.0 17.964799880981445 31 15 0 10 6 3.081792195552841 32.44865119209021 0.0 6 0.9586302381151238 6.046612683106832 55536.0 30.21891724486362 1.0 - - - - - - - 185.0 411 1 NEDD4L;CCT6A neural precursor cell expressed, developmentally down-regulated 4-like;chaperonin containing TCP1, subunit 6A (zeta 1) 1907 242 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7157.[MT7]-WVSDSAR.2b3_1.heavy 482.752 / 517.289 1262.0 22.856199264526367 44 14 10 10 10 1.7042109973815305 48.83770222490384 0.0 3 0.937846672193795 4.924415537128966 1262.0 2.7990010807418773 28.0 - - - - - - - 599.5 9 8 BIRC6 baculoviral IAP repeat-containing 6 1909 242 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7157.[MT7]-WVSDSAR.2y5_1.heavy 482.752 / 535.247 3281.0 22.856199264526367 44 14 10 10 10 1.7042109973815305 48.83770222490384 0.0 3 0.937846672193795 4.924415537128966 3281.0 5.699244541453288 4.0 - - - - - - - 568.0 6 8 BIRC6 baculoviral IAP repeat-containing 6 1911 242 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7157.[MT7]-WVSDSAR.2b4_1.heavy 482.752 / 632.316 3533.0 22.856199264526367 44 14 10 10 10 1.7042109973815305 48.83770222490384 0.0 3 0.937846672193795 4.924415537128966 3533.0 4.667107001321004 0.0 - - - - - - - 649.0 7 7 BIRC6 baculoviral IAP repeat-containing 6 1913 242 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7157.[MT7]-WVSDSAR.2y6_1.heavy 482.752 / 634.315 4291.0 22.856199264526367 44 14 10 10 10 1.7042109973815305 48.83770222490384 0.0 3 0.937846672193795 4.924415537128966 4291.0 6.963152138239662 0.0 - - - - - - - 252.0 8 5 BIRC6 baculoviral IAP repeat-containing 6 1915 243 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7158.[MT7]-TSIGWLR.2y4_1.heavy 488.788 / 531.304 N/A N/A - - - - - - - - - 0.0 - - - - - - - BIRC6 baculoviral IAP repeat-containing 6 1917 243 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7158.[MT7]-TSIGWLR.2y5_1.heavy 488.788 / 644.388 N/A N/A - - - - - - - - - 0.0 - - - - - - - BIRC6 baculoviral IAP repeat-containing 6 1919 243 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7158.[MT7]-TSIGWLR.2b4_1.heavy 488.788 / 503.295 N/A N/A - - - - - - - - - 0.0 - - - - - - - BIRC6 baculoviral IAP repeat-containing 6 1921 243 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7158.[MT7]-TSIGWLR.2y6_1.heavy 488.788 / 731.42 N/A N/A - - - - - - - - - 0.0 - - - - - - - BIRC6 baculoviral IAP repeat-containing 6 1923 244 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7152.[MT7]-RLFLQFTTGTDRAPVGGLGK[MT7].4y5_1.heavy 606.351 / 575.363 6974.0 33.014699935913086 39 13 10 6 10 2.132465946588858 37.83706037773609 0.03800201416015625 3 0.90348739100861 3.940160681167243 6974.0 8.006520721436184 0.0 - - - - - - - 730.0 13 8 UBE3A ubiquitin protein ligase E3A 1925 244 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7152.[MT7]-RLFLQFTTGTDRAPVGGLGK[MT7].4y13_2.heavy 606.351 / 686.887 15408.0 33.014699935913086 39 13 10 6 10 2.132465946588858 37.83706037773609 0.03800201416015625 3 0.90348739100861 3.940160681167243 15408.0 32.0568144824637 0.0 - - - - - - - 764.7142857142857 30 7 UBE3A ubiquitin protein ligase E3A 1927 244 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7152.[MT7]-RLFLQFTTGTDRAPVGGLGK[MT7].4b5_1.heavy 606.351 / 802.506 5352.0 33.014699935913086 39 13 10 6 10 2.132465946588858 37.83706037773609 0.03800201416015625 3 0.90348739100861 3.940160681167243 5352.0 9.954980579214627 0.0 - - - - - - - 351.3333333333333 10 12 UBE3A ubiquitin protein ligase E3A 1929 244 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7152.[MT7]-RLFLQFTTGTDRAPVGGLGK[MT7].4y14_2.heavy 606.351 / 737.411 10705.0 33.014699935913086 39 13 10 6 10 2.132465946588858 37.83706037773609 0.03800201416015625 3 0.90348739100861 3.940160681167243 10705.0 76.37361015968702 0.0 - - - - - - - 324.4166666666667 21 12 UBE3A ubiquitin protein ligase E3A 1931 245 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7153.[MT7]-TIPDK[MT7].2y4_1.heavy 431.268 / 616.379 3491.0 19.017799377441406 36 18 0 10 8 5.256000062342385 19.02587496458934 0.0 4 0.9882057862306549 11.352724515568758 3491.0 13.6229471592884 2.0 - - - - - - - 227.88888888888889 12 9 BIRC6 baculoviral IAP repeat-containing 6 1933 245 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7153.[MT7]-TIPDK[MT7].2b4_1.heavy 431.268 / 571.321 2054.0 19.017799377441406 36 18 0 10 8 5.256000062342385 19.02587496458934 0.0 4 0.9882057862306549 11.352724515568758 2054.0 0.9308830523301004 11.0 - - - - - - - 354.8181818181818 6 11 BIRC6 baculoviral IAP repeat-containing 6 1935 245 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7153.[MT7]-TIPDK[MT7].2y3_1.heavy 431.268 / 503.295 13554.0 19.017799377441406 36 18 0 10 8 5.256000062342385 19.02587496458934 0.0 4 0.9882057862306549 11.352724515568758 13554.0 18.84559159195235 0.0 - - - - - - - 282.25 27 8 BIRC6 baculoviral IAP repeat-containing 6 1937 245 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7153.[MT7]-TIPDK[MT7].2y1_1.heavy 431.268 / 291.215 N/A 19.017799377441406 36 18 0 10 8 5.256000062342385 19.02587496458934 0.0 4 0.9882057862306549 11.352724515568758 10473.0 0.38726606407633724 15.0 - - - - - - - 1438.0 112 1 BIRC6 baculoviral IAP repeat-containing 6 1939 246 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7051.[MT7]-YFNVER.2y4_1.heavy 486.257 / 517.273 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 1941 246 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7051.[MT7]-YFNVER.2b3_1.heavy 486.257 / 569.284 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 1943 246 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7051.[MT7]-YFNVER.2b5_1.heavy 486.257 / 797.395 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 1945 246 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7051.[MT7]-YFNVER.2y1_1.heavy 486.257 / 175.119 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 1947 247 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7155.[MT7]-IGLQSTR.2y5_1.heavy 459.778 / 604.341 3224.0 23.379125118255615 43 18 10 5 10 3.7961684859146394 26.34235028583202 0.04450035095214844 3 0.983091807151033 9.47763413869154 3224.0 2.9430555555555555 3.0 - - - - - - - 425.14285714285717 8 7 BIRC6 baculoviral IAP repeat-containing 6 1949 247 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7155.[MT7]-IGLQSTR.2b4_1.heavy 459.778 / 556.357 992.0 23.379125118255615 43 18 10 5 10 3.7961684859146394 26.34235028583202 0.04450035095214844 3 0.983091807151033 9.47763413869154 992.0 2.4399999999999995 20.0 - - - - - - - 385.77777777777777 6 9 BIRC6 baculoviral IAP repeat-containing 6 1951 247 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7155.[MT7]-IGLQSTR.2y6_1.heavy 459.778 / 661.363 504214.0 23.379125118255615 43 18 10 5 10 3.7961684859146394 26.34235028583202 0.04450035095214844 3 0.983091807151033 9.47763413869154 504214.0 236.63056889851828 0.0 - - - - - - - 992.0 1008 3 BIRC6 baculoviral IAP repeat-containing 6 1953 247 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7155.[MT7]-IGLQSTR.2b5_1.heavy 459.778 / 643.39 24801.0 23.379125118255615 43 18 10 5 10 3.7961684859146394 26.34235028583202 0.04450035095214844 3 0.983091807151033 9.47763413869154 24801.0 35.62643649193548 0.0 - - - - - - - 885.7142857142857 49 7 BIRC6 baculoviral IAP repeat-containing 6 1955 248 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7052.[MT7]-VGQYLK[MT7].2y4_1.heavy 498.31 / 695.421 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 1957 248 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7052.[MT7]-VGQYLK[MT7].2y5_1.heavy 498.31 / 752.442 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 1959 248 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7052.[MT7]-VGQYLK[MT7].2b4_1.heavy 498.31 / 592.321 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 1961 248 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7052.[MT7]-VGQYLK[MT7].2y3_1.heavy 498.31 / 567.362 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 1963 249 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7053.[MT7]-NYSNTSK[MT7].2y4_1.heavy 551.293 / 593.338 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 1965 249 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7053.[MT7]-NYSNTSK[MT7].2y5_1.heavy 551.293 / 680.37 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 1967 249 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7053.[MT7]-NYSNTSK[MT7].2b4_1.heavy 551.293 / 623.291 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 1969 249 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7053.[MT7]-NYSNTSK[MT7].2y6_1.heavy 551.293 / 843.433 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 1971 250 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7054.[MT7]-VSC[CAM]VLSSNLR.2y8_1.heavy 639.851 / 948.493 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 1973 250 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7054.[MT7]-VSC[CAM]VLSSNLR.2y9_1.heavy 639.851 / 1035.53 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 1975 250 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7054.[MT7]-VSC[CAM]VLSSNLR.2y6_1.heavy 639.851 / 689.394 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 1977 250 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7054.[MT7]-VSC[CAM]VLSSNLR.2y7_1.heavy 639.851 / 788.463 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 1979 251 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7150.[MT7]-EFWEIVHSFTDEQK[MT7].3y7_1.heavy 695.017 / 998.491 3854.0 41.71864891052246 44 18 10 6 10 4.933770994834517 20.26847214933495 0.03260040283203125 3 0.9871954349301892 10.894704359337597 3854.0 39.81223676721685 0.0 - - - - - - - 149.28 7 25 UBE3A ubiquitin protein ligase E3A 1981 251 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7150.[MT7]-EFWEIVHSFTDEQK[MT7].3b6_1.heavy 695.017 / 948.495 2221.0 41.71864891052246 44 18 10 6 10 4.933770994834517 20.26847214933495 0.03260040283203125 3 0.9871954349301892 10.894704359337597 2221.0 15.011027319294252 0.0 - - - - - - - 145.04166666666666 4 24 UBE3A ubiquitin protein ligase E3A 1983 251 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7150.[MT7]-EFWEIVHSFTDEQK[MT7].3b4_1.heavy 695.017 / 736.342 6829.0 41.71864891052246 44 18 10 6 10 4.933770994834517 20.26847214933495 0.03260040283203125 3 0.9871954349301892 10.894704359337597 6829.0 46.162119712277175 0.0 - - - - - - - 243.42857142857142 13 21 UBE3A ubiquitin protein ligase E3A 1985 251 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7150.[MT7]-EFWEIVHSFTDEQK[MT7].3b5_1.heavy 695.017 / 849.426 3938.0 41.71864891052246 44 18 10 6 10 4.933770994834517 20.26847214933495 0.03260040283203125 3 0.9871954349301892 10.894704359337597 3938.0 31.087190028578313 0.0 - - - - - - - 215.92307692307693 7 26 UBE3A ubiquitin protein ligase E3A 1987 252 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7055.[MT7]-FPTC[CAM]FPSFR.2y8_1.heavy 651.825 / 1011.47 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 1989 252 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7055.[MT7]-FPTC[CAM]FPSFR.2b4_1.heavy 651.825 / 650.309 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 1991 252 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7055.[MT7]-FPTC[CAM]FPSFR.2y6_1.heavy 651.825 / 813.371 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 1993 252 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7055.[MT7]-FPTC[CAM]FPSFR.2y7_1.heavy 651.825 / 914.419 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 1995 253 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7151.[MT7]-RITVLYSLVQGQQLNPYLR.3b5_1.heavy 802.464 / 727.495 1401.0 39.07059860229492 44 14 10 10 10 2.22702453754867 44.902962816059485 0.0 3 0.9326907023634443 4.72996802670784 1401.0 3.355688622754491 0.0 - - - - - - - 217.57894736842104 2 19 UBE3A ubiquitin protein ligase E3A 1997 253 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7151.[MT7]-RITVLYSLVQGQQLNPYLR.3y10_1.heavy 802.464 / 1216.64 1468.0 39.07059860229492 44 14 10 10 10 2.22702453754867 44.902962816059485 0.0 3 0.9326907023634443 4.72996802670784 1468.0 1.8336254681647937 0.0 - - - - - - - 145.11764705882354 2 17 UBE3A ubiquitin protein ligase E3A 1999 253 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7151.[MT7]-RITVLYSLVQGQQLNPYLR.3y4_1.heavy 802.464 / 548.319 3803.0 39.07059860229492 44 14 10 10 10 2.22702453754867 44.902962816059485 0.0 3 0.9326907023634443 4.72996802670784 3803.0 11.750842696629213 0.0 - - - - - - - 686.2857142857143 7 7 UBE3A ubiquitin protein ligase E3A 2001 253 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7151.[MT7]-RITVLYSLVQGQQLNPYLR.3y9_1.heavy 802.464 / 1088.58 3803.0 39.07059860229492 44 14 10 10 10 2.22702453754867 44.902962816059485 0.0 3 0.9326907023634443 4.72996802670784 3803.0 21.792471910112358 0.0 - - - - - - - 158.375 7 16 UBE3A ubiquitin protein ligase E3A 2003 254 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7058.[MT7]-LDEQC[CAM]SAIPTR.2b3_1.heavy 717.362 / 502.263 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 2005 254 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7058.[MT7]-LDEQC[CAM]SAIPTR.2y8_1.heavy 717.362 / 932.462 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 2007 254 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7058.[MT7]-LDEQC[CAM]SAIPTR.2y10_1.heavy 717.362 / 1176.53 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 2009 254 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7058.[MT7]-LDEQC[CAM]SAIPTR.2y7_1.heavy 717.362 / 804.403 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 2011 255 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6960.[MT7]-IHLDGR.2y4_1.heavy 427.752 / 460.251 1624.0 20.949600219726562 40 13 9 10 8 0.9344450898080947 68.94111250159641 0.0 4 0.9232207730261991 4.425086924451198 1624.0 4.305 7.0 - - - - - - - 367.3333333333333 3 12 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 2013 255 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6960.[MT7]-IHLDGR.2y2_1.heavy 427.752 / 232.14 10211.0 20.949600219726562 40 13 9 10 8 0.9344450898080947 68.94111250159641 0.0 4 0.9232207730261991 4.425086924451198 10211.0 13.270547886688078 0.0 - - - - - - - 348.0 20 4 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 2015 255 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6960.[MT7]-IHLDGR.2y5_1.heavy 427.752 / 597.31 4873.0 20.949600219726562 40 13 9 10 8 0.9344450898080947 68.94111250159641 0.0 4 0.9232207730261991 4.425086924451198 4873.0 7.794099445812808 1.0 - - - - - - - 386.6666666666667 23 3 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 2017 255 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6960.[MT7]-IHLDGR.2b4_1.heavy 427.752 / 623.363 6034.0 20.949600219726562 40 13 9 10 8 0.9344450898080947 68.94111250159641 0.0 4 0.9232207730261991 4.425086924451198 6034.0 15.605172413793102 0.0 - - - - - - - 265.14285714285717 12 7 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 2019 256 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7059.[MT7]-FGSFTYATTEK[MT7].2y4_1.heavy 770.4 / 622.353 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 2021 256 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7059.[MT7]-FGSFTYATTEK[MT7].2y5_1.heavy 770.4 / 693.39 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 2023 256 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7059.[MT7]-FGSFTYATTEK[MT7].2y3_1.heavy 770.4 / 521.305 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 2025 256 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7059.[MT7]-FGSFTYATTEK[MT7].2y7_1.heavy 770.4 / 957.501 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 2027 257 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6951.[MT7]-K[MT7]GPSQC[CAM]PLC[CAM]K[MT7].3y3_1.heavy 536.297 / 564.33 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2029 257 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6951.[MT7]-K[MT7]GPSQC[CAM]PLC[CAM]K[MT7].3b5_1.heavy 536.297 / 786.471 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2031 257 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6951.[MT7]-K[MT7]GPSQC[CAM]PLC[CAM]K[MT7].3y4_1.heavy 536.297 / 661.382 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2033 257 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6951.[MT7]-K[MT7]GPSQC[CAM]PLC[CAM]K[MT7].3y5_1.heavy 536.297 / 821.413 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2035 258 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6954.[MT7]-TSVYIELGSDSSEDTVNK[MT7].3b6_1.heavy 744.709 / 837.447 5336.0 29.635725021362305 34 11 10 5 8 1.3440735139627205 58.6165002947337 0.0420989990234375 4 0.8709223045906402 3.397430936138881 5336.0 11.246838407494144 0.0 - - - - - - - 320.0 10 12 BRCA1 breast cancer 1, early onset 2037 258 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6954.[MT7]-TSVYIELGSDSSEDTVNK[MT7].3y5_1.heavy 744.709 / 720.401 1921.0 29.635725021362305 34 11 10 5 8 1.3440735139627205 58.6165002947337 0.0420989990234375 4 0.8709223045906402 3.397430936138881 1921.0 7.23039150322014 2.0 - - - - - - - 308.1111111111111 4 9 BRCA1 breast cancer 1, early onset 2039 258 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6954.[MT7]-TSVYIELGSDSSEDTVNK[MT7].3b4_1.heavy 744.709 / 595.321 2135.0 29.635725021362305 34 11 10 5 8 1.3440735139627205 58.6165002947337 0.0420989990234375 4 0.8709223045906402 3.397430936138881 2135.0 1.9001874414245548 0.0 - - - - - - - 800.5 4 8 BRCA1 breast cancer 1, early onset 2041 258 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6954.[MT7]-TSVYIELGSDSSEDTVNK[MT7].3b5_1.heavy 744.709 / 708.405 1921.0 29.635725021362305 34 11 10 5 8 1.3440735139627205 58.6165002947337 0.0420989990234375 4 0.8709223045906402 3.397430936138881 1921.0 7.8279625292740045 4.0 - - - - - - - 341.4 6 10 BRCA1 breast cancer 1, early onset 2043 259 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6953.[MT7]-VEEVQNVINAMQK[MT7].3b6_1.heavy 597.329 / 843.433 6550.0 34.83912372589111 38 12 10 6 10 1.548142610310379 44.240768298673245 0.036899566650390625 3 0.8825886625810598 3.5658539279464914 6550.0 15.631647211413748 0.0 - - - - - - - 642.4285714285714 13 7 BRCA1 breast cancer 1, early onset 2045 259 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6953.[MT7]-VEEVQNVINAMQK[MT7].3b4_1.heavy 597.329 / 601.331 7064.0 34.83912372589111 38 12 10 6 10 1.548142610310379 44.240768298673245 0.036899566650390625 3 0.8825886625810598 3.5658539279464914 7064.0 19.515330739299607 0.0 - - - - - - - 238.42857142857142 14 7 BRCA1 breast cancer 1, early onset 2047 259 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6953.[MT7]-VEEVQNVINAMQK[MT7].3b3_1.heavy 597.329 / 502.263 5395.0 34.83912372589111 38 12 10 6 10 1.548142610310379 44.240768298673245 0.036899566650390625 3 0.8825886625810598 3.5658539279464914 5395.0 13.445482866043614 0.0 - - - - - - - 642.3333333333334 10 9 BRCA1 breast cancer 1, early onset 2049 259 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6953.[MT7]-VEEVQNVINAMQK[MT7].3y5_1.heavy 597.329 / 735.394 12459.0 34.83912372589111 38 12 10 6 10 1.548142610310379 44.240768298673245 0.036899566650390625 3 0.8825886625810598 3.5658539279464914 12459.0 32.009467617004255 0.0 - - - - - - - 629.5 24 10 BRCA1 breast cancer 1, early onset 2051 260 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6956.[MT7]-VVDVEEQQLEESGPHDLTETSYLPR.3b4_1.heavy 1005.5 / 557.341 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2053 260 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6956.[MT7]-VVDVEEQQLEESGPHDLTETSYLPR.3b5_1.heavy 1005.5 / 686.384 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2055 260 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6956.[MT7]-VVDVEEQQLEESGPHDLTETSYLPR.3y10_1.heavy 1005.5 / 1194.6 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2057 260 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6956.[MT7]-VVDVEEQQLEESGPHDLTETSYLPR.3y9_1.heavy 1005.5 / 1079.57 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2059 261 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6955.[MT7]-HHITLTNLITEETTHVVMK[MT7].4y4_1.heavy 627.099 / 620.392 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2061 261 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6955.[MT7]-HHITLTNLITEETTHVVMK[MT7].4y10_2.heavy 627.099 / 659.843 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2063 261 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6955.[MT7]-HHITLTNLITEETTHVVMK[MT7].4y3_1.heavy 627.099 / 521.324 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2065 261 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6955.[MT7]-HHITLTNLITEETTHVVMK[MT7].4b3_1.heavy 627.099 / 532.311 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2067 262 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6957.[MT7]-RLLQSEPENPSLQETSLSVQLSNLGTVR.4y9_1.heavy 810.689 / 987.558 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2069 262 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6957.[MT7]-RLLQSEPENPSLQETSLSVQLSNLGTVR.4y7_1.heavy 810.689 / 746.416 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2071 262 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6957.[MT7]-RLLQSEPENPSLQETSLSVQLSNLGTVR.4b9_1.heavy 810.689 / 1211.65 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2073 262 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6957.[MT7]-RLLQSEPENPSLQETSLSVQLSNLGTVR.4b6_1.heavy 810.689 / 871.512 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2075 263 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6959.[MT7]-VDNLGR.2b3_1.heavy 409.236 / 473.248 11671.0 19.284500122070312 44 14 10 10 10 2.50157634801017 31.416840808346073 0.0 3 0.9466155063666623 5.317451828120748 11671.0 27.716879679297648 0.0 - - - - - - - 247.33333333333334 23 6 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 2077 263 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6959.[MT7]-VDNLGR.2y4_1.heavy 409.236 / 459.267 18249.0 19.284500122070312 44 14 10 10 10 2.50157634801017 31.416840808346073 0.0 3 0.9466155063666623 5.317451828120748 18249.0 13.545041538327002 0.0 - - - - - - - 291.5 36 8 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 2079 263 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6959.[MT7]-VDNLGR.2y5_1.heavy 409.236 / 574.294 30768.0 19.284500122070312 44 14 10 10 10 2.50157634801017 31.416840808346073 0.0 3 0.9466155063666623 5.317451828120748 30768.0 33.99265953863506 0.0 - - - - - - - 265.0 61 4 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 2081 263 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6959.[MT7]-VDNLGR.2b4_1.heavy 409.236 / 586.332 9761.0 19.284500122070312 44 14 10 10 10 2.50157634801017 31.416840808346073 0.0 3 0.9466155063666623 5.317451828120748 9761.0 64.45943396226414 1.0 - - - - - - - 306.22222222222223 30 9 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like 2083 264 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7149.[MT7]-K[MT7]GPRVDPLETELGVK[MT7].4y4_1.heavy 518.313 / 560.389 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 2085 264 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7149.[MT7]-K[MT7]GPRVDPLETELGVK[MT7].4b8_2.heavy 518.313 / 576.361 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 2087 264 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7149.[MT7]-K[MT7]GPRVDPLETELGVK[MT7].4b6_1.heavy 518.313 / 941.577 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 2089 264 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7149.[MT7]-K[MT7]GPRVDPLETELGVK[MT7].4b9_2.heavy 518.313 / 640.882 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 2091 265 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7147.[MT7]-DLGDSHPVLYQSLK[MT7].3y6_1.heavy 620.675 / 895.537 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 2093 265 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7147.[MT7]-DLGDSHPVLYQSLK[MT7].3b4_1.heavy 620.675 / 545.269 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 2095 265 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7147.[MT7]-DLGDSHPVLYQSLK[MT7].3b5_1.heavy 620.675 / 632.301 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 2097 265 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7147.[MT7]-DLGDSHPVLYQSLK[MT7].3y5_1.heavy 620.675 / 782.453 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 2099 266 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7148.[MT7]-EFVNLYSDYILNK[MT7].3y3_1.heavy 636.012 / 518.342 13743.0 39.1610746383667 39 13 10 6 10 1.564104728600025 51.05265747796538 0.032901763916015625 3 0.9214751047114772 4.3749687416524266 13743.0 39.08973654247893 0.0 - - - - - - - 735.3636363636364 27 11 UBE3A ubiquitin protein ligase E3A 2101 266 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7148.[MT7]-EFVNLYSDYILNK[MT7].3b4_1.heavy 636.012 / 634.332 8943.0 39.1610746383667 39 13 10 6 10 1.564104728600025 51.05265747796538 0.032901763916015625 3 0.9214751047114772 4.3749687416524266 8943.0 34.41356962025317 0.0 - - - - - - - 781.6666666666666 17 9 UBE3A ubiquitin protein ligase E3A 2103 266 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7148.[MT7]-EFVNLYSDYILNK[MT7].3b5_1.heavy 636.012 / 747.416 8022.0 39.1610746383667 39 13 10 6 10 1.564104728600025 51.05265747796538 0.032901763916015625 3 0.9214751047114772 4.3749687416524266 8022.0 30.47873513981807 0.0 - - - - - - - 292.7 16 20 UBE3A ubiquitin protein ligase E3A 2105 266 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7148.[MT7]-EFVNLYSDYILNK[MT7].3b3_1.heavy 636.012 / 520.289 3485.0 39.1610746383667 39 13 10 6 10 1.564104728600025 51.05265747796538 0.032901763916015625 3 0.9214751047114772 4.3749687416524266 3485.0 2.7902321857485988 0.0 - - - - - - - 670.7 6 10 UBE3A ubiquitin protein ligase E3A 2107 267 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7145.[MT7]-LGPDDVSVDIDAIRR.3b4_1.heavy 595.659 / 527.295 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 2109 267 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7145.[MT7]-LGPDDVSVDIDAIRR.3y14_2.heavy 595.659 / 764.392 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 2111 267 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7145.[MT7]-LGPDDVSVDIDAIRR.3b5_1.heavy 595.659 / 642.321 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 2113 267 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7145.[MT7]-LGPDDVSVDIDAIRR.3y4_1.heavy 595.659 / 515.341 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 2115 268 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7146.[MT7]-VFSSAEALVQSFRK[MT7].3y7_1.heavy 619.687 / 1021.63 3594.0 38.63374900817871 44 18 10 6 10 4.32581541592463 18.406549621556348 0.033298492431640625 3 0.9864580860289683 10.59329398496432 3594.0 31.692545454545453 0.0 - - - - - - - 183.33333333333334 7 12 UBE3A ubiquitin protein ligase E3A 2117 268 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7146.[MT7]-VFSSAEALVQSFRK[MT7].3b6_1.heavy 619.687 / 765.39 4914.0 38.63374900817871 44 18 10 6 10 4.32581541592463 18.406549621556348 0.033298492431640625 3 0.9864580860289683 10.59329398496432 4914.0 27.175909090909087 0.0 - - - - - - - 220.05263157894737 9 19 UBE3A ubiquitin protein ligase E3A 2119 268 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7146.[MT7]-VFSSAEALVQSFRK[MT7].3y6_1.heavy 619.687 / 908.543 5941.0 38.63374900817871 44 18 10 6 10 4.32581541592463 18.406549621556348 0.033298492431640625 3 0.9864580860289683 10.59329398496432 5941.0 24.282016348773844 0.0 - - - - - - - 187.1 11 20 UBE3A ubiquitin protein ligase E3A 2121 268 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7146.[MT7]-VFSSAEALVQSFRK[MT7].3y8_1.heavy 619.687 / 1092.66 3227.0 38.63374900817871 44 18 10 6 10 4.32581541592463 18.406549621556348 0.033298492431640625 3 0.9864580860289683 10.59329398496432 3227.0 36.76598391696666 0.0 - - - - - - - 129.53846153846155 6 13 UBE3A ubiquitin protein ligase E3A 2123 269 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 BLAT_ECOLX.VAGPLLRSALPAGWFIADK.3y7.peptide 661.38 / 836.43 427237.0 39.914798736572266 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 427237.0 338.3608778474676 0.0 - - - - - - - 792.75 854 4 2125 269 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 BLAT_ECOLX.VAGPLLRSALPAGWFIADK.3y9.peptide 661.38 / 502.76 716227.0 39.914798736572266 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 716227.0 365.7146317041168 0.0 - - - - - - - 1383.6666666666667 1432 3 2127 269 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 BLAT_ECOLX.VAGPLLRSALPAGWFIADK.3y17.peptide 661.38 / 906.51 688206.0 39.914798736572266 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 688206.0 427.2759559181096 0.0 - - - - - - - 922.0 1376 1 2129 270 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7143.[MT7]-K[MT7]GASSAYLENSK[MT7].3b6_1.heavy 562.984 / 790.466 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 2131 270 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7143.[MT7]-K[MT7]GASSAYLENSK[MT7].3y4_1.heavy 562.984 / 621.332 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 2133 270 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7143.[MT7]-K[MT7]GASSAYLENSK[MT7].3b7_1.heavy 562.984 / 953.529 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 2135 270 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7143.[MT7]-K[MT7]GASSAYLENSK[MT7].3y5_1.heavy 562.984 / 734.417 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 2137 271 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7040.[MT7]-RALEWLGADRNEGR.3b9_1.heavy 596.319 / 1156.62 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2139 271 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7040.[MT7]-RALEWLGADRNEGR.3b4_1.heavy 596.319 / 614.374 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2141 271 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7040.[MT7]-RALEWLGADRNEGR.3b5_1.heavy 596.319 / 800.453 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2143 271 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7040.[MT7]-RALEWLGADRNEGR.3y13_2.heavy 596.319 / 743.873 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2145 272 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7144.[MT7]-NLVNDDDAIVAASK[MT7].3y4_1.heavy 578.315 / 520.321 22702.0 27.88279914855957 39 9 10 10 10 0.816015277363879 73.01044061044944 0.0 3 0.8065039065417764 2.7590580723052445 22702.0 46.75442777352613 0.0 - - - - - - - 399.27272727272725 45 11 UBE3A ubiquitin protein ligase E3A 2147 272 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7144.[MT7]-NLVNDDDAIVAASK[MT7].3b8_1.heavy 578.315 / 1001.47 6347.0 27.88279914855957 39 9 10 10 10 0.816015277363879 73.01044061044944 0.0 3 0.8065039065417764 2.7590580723052445 6347.0 15.421656493218366 1.0 - - - - - - - 244.0 13 4 UBE3A ubiquitin protein ligase E3A 2149 272 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7144.[MT7]-NLVNDDDAIVAASK[MT7].3y5_1.heavy 578.315 / 619.39 10497.0 27.88279914855957 39 9 10 10 10 0.816015277363879 73.01044061044944 0.0 3 0.8065039065417764 2.7590580723052445 10497.0 19.789426229508194 0.0 - - - - - - - 762.5 20 8 UBE3A ubiquitin protein ligase E3A 2151 272 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7144.[MT7]-NLVNDDDAIVAASK[MT7].3b7_1.heavy 578.315 / 930.429 4638.0 27.88279914855957 39 9 10 10 10 0.816015277363879 73.01044061044944 0.0 3 0.8065039065417764 2.7590580723052445 4638.0 20.90901639344262 0.0 - - - - - - - 325.3333333333333 9 6 UBE3A ubiquitin protein ligase E3A 2153 273 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7141.[MT7]-LGPDDVSVDIDAIR.2y5_1.heavy 814.934 / 587.351 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 2155 273 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7141.[MT7]-LGPDDVSVDIDAIR.2y9_1.heavy 814.934 / 987.547 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 2157 273 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7141.[MT7]-LGPDDVSVDIDAIR.2y10_1.heavy 814.934 / 1102.57 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 2159 273 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7141.[MT7]-LGPDDVSVDIDAIR.2b5_1.heavy 814.934 / 642.321 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 2161 274 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7142.[MT7]-IGDSSQGDNNLQK[MT7].3y3_1.heavy 555.288 / 532.357 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 2163 274 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7142.[MT7]-IGDSSQGDNNLQK[MT7].3b4_1.heavy 555.288 / 517.274 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 2165 274 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7142.[MT7]-IGDSSQGDNNLQK[MT7].3b5_1.heavy 555.288 / 604.306 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 2167 274 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7142.[MT7]-IGDSSQGDNNLQK[MT7].3b8_1.heavy 555.288 / 904.413 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 2169 275 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7044.[MT7]-LLGDVR.2b3_1.heavy 408.757 / 428.299 10102.0 29.510299682617188 41 18 10 5 8 2.762377029833435 36.200706464037516 0.04409980773925781 4 0.9818130469261654 9.137386242037998 10102.0 17.481774321013674 1.0 - - - - - - - 369.5 145 6 ANAPC4 anaphase promoting complex subunit 4 2171 275 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7044.[MT7]-LLGDVR.2y5_1.heavy 408.757 / 559.32 68249.0 29.510299682617188 41 18 10 5 8 2.762377029833435 36.200706464037516 0.04409980773925781 4 0.9818130469261654 9.137386242037998 68249.0 54.936945630478604 0.0 - - - - - - - 443.6 136 5 ANAPC4 anaphase promoting complex subunit 4 2173 275 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7044.[MT7]-LLGDVR.2b4_1.heavy 408.757 / 543.326 N/A 29.510299682617188 41 18 10 5 8 2.762377029833435 36.200706464037516 0.04409980773925781 4 0.9818130469261654 9.137386242037998 0.0 0.0 34.0 - - - - - - - 246.0 9 4 ANAPC4 anaphase promoting complex subunit 4 2175 275 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7044.[MT7]-LLGDVR.2b5_1.heavy 408.757 / 642.394 6406.0 29.510299682617188 41 18 10 5 8 2.762377029833435 36.200706464037516 0.04409980773925781 4 0.9818130469261654 9.137386242037998 6406.0 28.115979320239447 0.0 - - - - - - - 351.85714285714283 12 7 ANAPC4 anaphase promoting complex subunit 4 2177 276 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7140.[MT7]-VFSSAEALVQSFR.2y9_1.heavy 792.929 / 1020.55 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 2179 276 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7140.[MT7]-VFSSAEALVQSFR.2y10_1.heavy 792.929 / 1107.58 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 2181 276 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7140.[MT7]-VFSSAEALVQSFR.2y11_1.heavy 792.929 / 1194.61 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 2183 276 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7140.[MT7]-VFSSAEALVQSFR.2y7_1.heavy 792.929 / 820.468 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 2185 277 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7045.[MT7]-VVGEK[MT7].2y4_1.heavy 410.263 / 576.347 30593.0 17.207599639892578 38 18 2 10 8 7.628903841315595 13.108043053109858 0.0 4 0.9846189224080764 9.938269101574228 30593.0 107.45047759932375 2.0 - - - - - - - 304.2 131 5 ANAPC4;CKAP5 anaphase promoting complex subunit 4;cytoskeleton associated protein 5 2187 277 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7045.[MT7]-VVGEK[MT7].2b4_1.heavy 410.263 / 529.31 2535.0 17.207599639892578 38 18 2 10 8 7.628903841315595 13.108043053109858 0.0 4 0.9846189224080764 9.938269101574228 2535.0 0.20833333333333326 9.0 - - - - - - - 289.7142857142857 13 7 ANAPC4;CKAP5 anaphase promoting complex subunit 4;cytoskeleton associated protein 5 2189 277 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7045.[MT7]-VVGEK[MT7].2y3_1.heavy 410.263 / 477.279 18592.0 17.207599639892578 38 18 2 10 8 7.628903841315595 13.108043053109858 0.0 4 0.9846189224080764 9.938269101574228 18592.0 14.493589817683905 0.0 - - - - - - - 253.5 37 4 ANAPC4;CKAP5 anaphase promoting complex subunit 4;cytoskeleton associated protein 5 2191 277 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7045.[MT7]-VVGEK[MT7].2y2_1.heavy 410.263 / 420.258 3549.0 17.207599639892578 38 18 2 10 8 7.628903841315595 13.108043053109858 0.0 4 0.9846189224080764 9.938269101574228 3549.0 4.6274999999999995 2.0 - - - - - - - 300.44444444444446 7 9 ANAPC4;CKAP5 anaphase promoting complex subunit 4;cytoskeleton associated protein 5 2193 278 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7042.[MT7]-ERTAAFQALGLLSVAVR.3b6_1.heavy 649.382 / 820.443 3509.0 41.2239990234375 41 11 10 10 10 0.9759314464063461 60.16364444725497 0.0 3 0.8797589817906737 3.5227769086477783 3509.0 21.1152958013259 0.0 - - - - - - - 208.76190476190476 7 21 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2195 278 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7042.[MT7]-ERTAAFQALGLLSVAVR.3y6_1.heavy 649.382 / 644.409 12428.0 41.2239990234375 41 11 10 10 10 0.9759314464063461 60.16364444725497 0.0 3 0.8797589817906737 3.5227769086477783 12428.0 24.974202294482414 0.0 - - - - - - - 752.8888888888889 24 9 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2197 278 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7042.[MT7]-ERTAAFQALGLLSVAVR.3y8_1.heavy 649.382 / 814.515 17350.0 41.2239990234375 41 11 10 10 10 0.9759314464063461 60.16364444725497 0.0 3 0.8797589817906737 3.5227769086477783 17350.0 32.59978064291357 1.0 - - - - - - - 263.2 34 15 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2199 278 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7042.[MT7]-ERTAAFQALGLLSVAVR.3b8_2.heavy 649.382 / 510.273 19884.0 41.2239990234375 41 11 10 10 10 0.9759314464063461 60.16364444725497 0.0 3 0.8797589817906737 3.5227769086477783 19884.0 44.21697599216071 0.0 - - - - - - - 633.5714285714286 39 7 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2201 279 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7043.[MT7]-TLGSFEFEGHSLTQFVR.3y7_1.heavy 700.361 / 850.478 7205.0 37.70560073852539 50 20 10 10 10 3.9607037569957853 25.248038261728148 0.0 3 0.9902884417057426 12.51312573790699 7205.0 29.447284445043902 0.0 - - - - - - - 269.70588235294116 14 17 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2203 279 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7043.[MT7]-TLGSFEFEGHSLTQFVR.3y6_1.heavy 700.361 / 763.446 2994.0 37.70560073852539 50 20 10 10 10 3.9607037569957853 25.248038261728148 0.0 3 0.9902884417057426 12.51312573790699 2994.0 6.930493406538487 0.0 - - - - - - - 708.5714285714286 5 7 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2205 279 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7043.[MT7]-TLGSFEFEGHSLTQFVR.3b6_1.heavy 700.361 / 779.406 3369.0 37.70560073852539 50 20 10 10 10 3.9607037569957853 25.248038261728148 0.0 3 0.9902884417057426 12.51312573790699 3369.0 8.232368861493244 0.0 - - - - - - - 306.77777777777777 6 18 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2207 279 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7043.[MT7]-TLGSFEFEGHSLTQFVR.3y9_1.heavy 700.361 / 1044.56 2714.0 37.70560073852539 50 20 10 10 10 3.9607037569957853 25.248038261728148 0.0 3 0.9902884417057426 12.51312573790699 2714.0 20.31871657754011 0.0 - - - - - - - 234.0625 5 16 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2209 280 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7048.[MT7]-FVQEK[MT7].2b3_1.heavy 469.781 / 519.305 3485.0 20.8617000579834 38 18 4 10 6 5.741078217989541 17.418330878449318 0.0 5 0.9813609758431074 9.025554611377974 3485.0 0.16666666666666663 7.0 - - - - - - - 319.375 16 8 ANAPC4 anaphase promoting complex subunit 4 2211 280 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7048.[MT7]-FVQEK[MT7].2y4_1.heavy 469.781 / 647.385 11616.0 20.8617000579834 38 18 4 10 6 5.741078217989541 17.418330878449318 0.0 5 0.9813609758431074 9.025554611377974 11616.0 29.18134917550386 0.0 - - - - - - - 387.3333333333333 23 9 ANAPC4 anaphase promoting complex subunit 4 2213 280 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7048.[MT7]-FVQEK[MT7].2y3_1.heavy 469.781 / 548.316 6970.0 20.8617000579834 38 18 4 10 6 5.741078217989541 17.418330878449318 0.0 5 0.9813609758431074 9.025554611377974 6970.0 18.693548387096772 0.0 - - - - - - - 319.375 13 8 ANAPC4 anaphase promoting complex subunit 4 2215 280 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7048.[MT7]-FVQEK[MT7].2y1_1.heavy 469.781 / 291.215 N/A 20.8617000579834 38 18 4 10 6 5.741078217989541 17.418330878449318 0.0 5 0.9813609758431074 9.025554611377974 13707.0 3.671271194239379 11.0 - - - - - - - 1394.0 49 2 ANAPC4 anaphase promoting complex subunit 4 2217 281 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6950.[MT7]-EK[MT7]PELTASTER.3y7_1.heavy 516.954 / 777.41 2080.0 19.37529945373535 41 11 10 10 10 1.7889372272655115 44.110502807005595 0.0 3 0.8713225230232089 3.40282940824701 2080.0 13.5 0.0 - - - - - - - 312.0 4 6 BRCA1 breast cancer 1, early onset 2219 281 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6950.[MT7]-EK[MT7]PELTASTER.3y6_1.heavy 516.954 / 664.326 2912.0 19.37529945373535 41 11 10 10 10 1.7889372272655115 44.110502807005595 0.0 3 0.8713225230232089 3.40282940824701 2912.0 13.16 0.0 - - - - - - - 291.2 5 10 BRCA1 breast cancer 1, early onset 2221 281 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6950.[MT7]-EK[MT7]PELTASTER.3y5_1.heavy 516.954 / 563.278 5824.0 19.37529945373535 41 11 10 10 10 1.7889372272655115 44.110502807005595 0.0 3 0.8713225230232089 3.40282940824701 5824.0 33.879999999999995 0.0 - - - - - - - 297.14285714285717 11 7 BRCA1 breast cancer 1, early onset 2223 281 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6950.[MT7]-EK[MT7]PELTASTER.3y9_1.heavy 516.954 / 1003.51 1248.0 19.37529945373535 41 11 10 10 10 1.7889372272655115 44.110502807005595 0.0 3 0.8713225230232089 3.40282940824701 1248.0 12.0 0.0 - - - - - - - 416.0 2 1 BRCA1 breast cancer 1, early onset 2225 282 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7049.[MT7]-LPTLPK[MT7].2y4_1.heavy 478.823 / 602.399 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4;CCDC8 anaphase promoting complex subunit 4;coiled-coil domain containing 8 2227 282 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7049.[MT7]-LPTLPK[MT7].2y5_1.heavy 478.823 / 699.452 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4;CCDC8 anaphase promoting complex subunit 4;coiled-coil domain containing 8 2229 282 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7049.[MT7]-LPTLPK[MT7].2b4_1.heavy 478.823 / 569.378 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4;CCDC8 anaphase promoting complex subunit 4;coiled-coil domain containing 8 2231 282 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7049.[MT7]-LPTLPK[MT7].2y3_1.heavy 478.823 / 501.352 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4;CCDC8 anaphase promoting complex subunit 4;coiled-coil domain containing 8 2233 283 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7046.[MT7]-LASFHR.2y4_1.heavy 437.754 / 546.278 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 2235 283 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7046.[MT7]-LASFHR.2y5_1.heavy 437.754 / 617.315 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 2237 283 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7046.[MT7]-LASFHR.2b4_1.heavy 437.754 / 563.331 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 2239 283 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7046.[MT7]-LASFHR.2b5_1.heavy 437.754 / 700.39 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 2241 284 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7047.[MT7]-LDPELDS.2b3_1.heavy 466.738 / 470.273 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 2243 284 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7047.[MT7]-LDPELDS.2b4_1.heavy 466.738 / 599.316 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 2245 284 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7047.[MT7]-LDPELDS.2b6_1.heavy 466.738 / 827.427 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 2247 284 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7047.[MT7]-LDPELDS.2y6_1.heavy 466.738 / 675.283 N/A N/A - - - - - - - - - 0.0 - - - - - - - ANAPC4 anaphase promoting complex subunit 4 2249 285 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6943.[MT7]-ENNSPEHLK[MT7].3b6_1.heavy 452.577 / 815.365 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2251 285 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6943.[MT7]-ENNSPEHLK[MT7].3y3_1.heavy 452.577 / 541.358 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2253 285 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6943.[MT7]-ENNSPEHLK[MT7].3b4_1.heavy 452.577 / 589.27 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2255 285 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6943.[MT7]-ENNSPEHLK[MT7].3b3_1.heavy 452.577 / 502.238 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2257 286 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6942.[MT7]-GPSQC[CAM]PLC[CAM]K[MT7].2y4_1.heavy 667.844 / 661.382 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2259 286 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6942.[MT7]-GPSQC[CAM]PLC[CAM]K[MT7].2y5_1.heavy 667.844 / 821.413 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2261 286 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6942.[MT7]-GPSQC[CAM]PLC[CAM]K[MT7].2b4_1.heavy 667.844 / 514.274 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2263 286 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6942.[MT7]-GPSQC[CAM]PLC[CAM]K[MT7].2b5_1.heavy 667.844 / 674.305 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2265 287 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6941.[MT7]-TDAEFVC[CAM]ER.2y8_1.heavy 635.796 / 1025.44 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2267 287 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6941.[MT7]-TDAEFVC[CAM]ER.2y5_1.heavy 635.796 / 710.329 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2269 287 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6941.[MT7]-TDAEFVC[CAM]ER.2b4_1.heavy 635.796 / 561.264 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2271 287 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6941.[MT7]-TDAEFVC[CAM]ER.2y7_1.heavy 635.796 / 910.409 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2273 288 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7039.[MT7]-LFDAPEAPLPSRK[MT7].3y6_1.heavy 577.001 / 841.538 2852.0 29.60395050048828 39 14 10 5 10 1.45027286823701 41.73894503249594 0.042499542236328125 3 0.9481065496959113 5.393986831868072 2852.0 5.4860766413886575 0.0 - - - - - - - 263.0 5 10 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2275 288 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7039.[MT7]-LFDAPEAPLPSRK[MT7].3b4_1.heavy 577.001 / 591.326 3511.0 29.60395050048828 39 14 10 5 10 1.45027286823701 41.73894503249594 0.042499542236328125 3 0.9481065496959113 5.393986831868072 3511.0 2.9650186011904758 0.0 - - - - - - - 720.8571428571429 7 7 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2277 288 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7039.[MT7]-LFDAPEAPLPSRK[MT7].3y4_1.heavy 577.001 / 631.401 1975.0 29.60395050048828 39 14 10 5 10 1.45027286823701 41.73894503249594 0.042499542236328125 3 0.9481065496959113 5.393986831868072 1975.0 2.201215805471125 7.0 - - - - - - - 307.0 4 10 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2279 288 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7039.[MT7]-LFDAPEAPLPSRK[MT7].3b3_1.heavy 577.001 / 520.289 5705.0 29.60395050048828 39 14 10 5 10 1.45027286823701 41.73894503249594 0.042499542236328125 3 0.9481065496959113 5.393986831868072 5705.0 6.5696732169437935 1.0 - - - - - - - 313.2857142857143 11 7 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2281 289 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6946.[MT7]-VGNIPSSTSALK[MT7].2y4_1.heavy 731.429 / 562.368 N/A 29.13559913635254 31 3 10 10 8 0.34500744438695075 130.15968256240058 0.0 4 0.5993036597675232 1.8804076603190447 0.0 0.0 44.0 - - - - - - - 261.0 2 7 BRCA1 breast cancer 1, early onset 2283 289 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6946.[MT7]-VGNIPSSTSALK[MT7].2y8_1.heavy 731.429 / 934.533 2611.0 29.13559913635254 31 3 10 10 8 0.34500744438695075 130.15968256240058 0.0 4 0.5993036597675232 1.8804076603190447 2611.0 12.419866794991659 0.0 - - - - - - - 261.0 5 1 BRCA1 breast cancer 1, early onset 2285 289 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6946.[MT7]-VGNIPSSTSALK[MT7].2b4_1.heavy 731.429 / 528.326 2873.0 29.13559913635254 31 3 10 10 8 0.34500744438695075 130.15968256240058 0.0 4 0.5993036597675232 1.8804076603190447 2873.0 5.168650717703349 3.0 - - - - - - - 261.0 5 4 BRCA1 breast cancer 1, early onset 2287 289 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6946.[MT7]-VGNIPSSTSALK[MT7].2y11_1.heavy 731.429 / 1218.68 6006.0 29.13559913635254 31 3 10 10 8 0.34500744438695075 130.15968256240058 0.0 4 0.5993036597675232 1.8804076603190447 6006.0 6.711808199282618 1.0 - - - - - - - 261.0 12 3 BRCA1 breast cancer 1, early onset 2289 290 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6945.[MT7]-FEVSADSSTSK[MT7].2b3_1.heavy 723.372 / 520.289 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2291 290 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6945.[MT7]-FEVSADSSTSK[MT7].2y8_1.heavy 723.372 / 926.455 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2293 290 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6945.[MT7]-FEVSADSSTSK[MT7].2y5_1.heavy 723.372 / 653.359 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2295 290 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6945.[MT7]-FEVSADSSTSK[MT7].2y9_1.heavy 723.372 / 1025.52 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2297 291 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6944.[MT7]-DTMQHNLIK[MT7].3y3_1.heavy 463.258 / 517.383 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2299 291 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6944.[MT7]-DTMQHNLIK[MT7].3b4_1.heavy 463.258 / 620.283 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2301 291 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6944.[MT7]-DTMQHNLIK[MT7].3y4_1.heavy 463.258 / 631.426 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2303 291 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6944.[MT7]-DTMQHNLIK[MT7].3b3_1.heavy 463.258 / 492.224 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2305 292 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6949.[MT7]-DEVSIIQSMGYR.2b4_1.heavy 771.391 / 575.279 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2307 292 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6949.[MT7]-DEVSIIQSMGYR.2y9_1.heavy 771.391 / 1054.54 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2309 292 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6949.[MT7]-DEVSIIQSMGYR.2y10_1.heavy 771.391 / 1153.6 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2311 292 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6949.[MT7]-DEVSIIQSMGYR.2y7_1.heavy 771.391 / 854.419 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2313 293 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6948.[MT7]-NYPSQEELIK[MT7].2y8_1.heavy 754.914 / 1087.61 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2315 293 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6948.[MT7]-NYPSQEELIK[MT7].2y3_1.heavy 754.914 / 517.383 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2317 293 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6948.[MT7]-NYPSQEELIK[MT7].2b7_1.heavy 754.914 / 992.444 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2319 293 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A6948.[MT7]-NYPSQEELIK[MT7].2y7_1.heavy 754.914 / 990.559 N/A N/A - - - - - - - - - 0.0 - - - - - - - BRCA1 breast cancer 1, early onset 2321 294 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7138.[MT7]-SGEPQSDDIEASR.2b8_1.heavy 767.859 / 960.403 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 2323 294 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7138.[MT7]-SGEPQSDDIEASR.2y5_1.heavy 767.859 / 575.315 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 2325 294 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7138.[MT7]-SGEPQSDDIEASR.2y6_1.heavy 767.859 / 690.342 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 2327 294 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7138.[MT7]-SGEPQSDDIEASR.2y10_1.heavy 767.859 / 1117.51 N/A N/A - - - - - - - - - 0.0 - - - - - - - UBE3A ubiquitin protein ligase E3A 2329 295 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7176.[MT7]-ELSDLAR.2y5_1.heavy 474.268 / 561.299 2874.0 25.093299865722656 47 17 10 10 10 4.72253835189138 21.175053022057497 0.0 3 0.9784359129202471 8.389059933799079 2874.0 12.255062749237627 1.0 - - - - - - - 261.0 5 6 UBE2D3 ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) 2331 295 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7176.[MT7]-ELSDLAR.2b4_1.heavy 474.268 / 589.295 11494.0 25.093299865722656 47 17 10 10 10 4.72253835189138 21.175053022057497 0.0 3 0.9784359129202471 8.389059933799079 11494.0 45.34977095822105 0.0 - - - - - - - 261.0 22 8 UBE2D3 ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) 2333 295 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7176.[MT7]-ELSDLAR.2y6_1.heavy 474.268 / 674.383 5747.0 25.093299865722656 47 17 10 10 10 4.72253835189138 21.175053022057497 0.0 3 0.9784359129202471 8.389059933799079 5747.0 3.9150970643464182 2.0 - - - - - - - 638.4444444444445 17 9 UBE2D3 ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) 2335 295 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7176.[MT7]-ELSDLAR.2b5_1.heavy 474.268 / 702.379 2874.0 25.093299865722656 47 17 10 10 10 4.72253835189138 21.175053022057497 0.0 3 0.9784359129202471 8.389059933799079 2874.0 2.4752153110047845 1.0 - - - - - - - 626.8 5 10 UBE2D3 ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) 2337 296 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7030.[MT7]-YC[CAM]VLASLDER.2b3_1.heavy 685.349 / 567.272 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2339 296 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7030.[MT7]-YC[CAM]VLASLDER.2y8_1.heavy 685.349 / 902.494 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2341 296 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7030.[MT7]-YC[CAM]VLASLDER.2y6_1.heavy 685.349 / 690.342 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2343 296 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7030.[MT7]-YC[CAM]VLASLDER.2y7_1.heavy 685.349 / 803.426 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2345 297 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7179.[MT7]-SQWSPALTISK[MT7].2y4_1.heavy 753.432 / 592.379 5384.0 30.94610023498535 46 16 10 10 10 2.159983280714063 36.60739087223321 0.0 3 0.963321073611535 6.424178355213075 5384.0 18.351478696741857 0.0 - - - - - - - 299.0 10 10 UBE2D2;UBE2D3 ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast);ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) 2347 297 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7179.[MT7]-SQWSPALTISK[MT7].2y8_1.heavy 753.432 / 960.585 6182.0 30.94610023498535 46 16 10 10 10 2.159983280714063 36.60739087223321 0.0 3 0.963321073611535 6.424178355213075 6182.0 43.14498935781665 0.0 - - - - - - - 232.33333333333334 12 6 UBE2D2;UBE2D3 ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast);ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) 2349 297 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7179.[MT7]-SQWSPALTISK[MT7].2b4_1.heavy 753.432 / 633.311 10370.0 30.94610023498535 46 16 10 10 10 2.159983280714063 36.60739087223321 0.0 3 0.963321073611535 6.424178355213075 10370.0 16.48004238278746 0.0 - - - - - - - 274.0 20 8 UBE2D2;UBE2D3 ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast);ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) 2351 297 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7179.[MT7]-SQWSPALTISK[MT7].2y7_1.heavy 753.432 / 873.553 12763.0 30.94610023498535 46 16 10 10 10 2.159983280714063 36.60739087223321 0.0 3 0.963321073611535 6.424178355213075 12763.0 50.87719222806179 0.0 - - - - - - - 672.875 25 8 UBE2D2;UBE2D3 ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast);ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) 2353 298 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7036.[MT7]-TAAFQALGLLSVAVR.3y6_1.heavy 554.334 / 644.409 9711.0 45.19670104980469 50 20 10 10 10 9.182286462991067 10.890533681675803 0.0 3 0.9920874527711012 13.864922014743916 9711.0 167.70445127304654 0.0 - - - - - - - 170.5 19 22 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2355 298 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7036.[MT7]-TAAFQALGLLSVAVR.3b6_1.heavy 554.334 / 734.395 10383.0 45.19670104980469 50 20 10 10 10 9.182286462991067 10.890533681675803 0.0 3 0.9920874527711012 13.864922014743916 10383.0 153.65054563492063 0.0 - - - - - - - 176.04761904761904 20 21 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2357 298 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7036.[MT7]-TAAFQALGLLSVAVR.3b5_1.heavy 554.334 / 663.358 8971.0 45.19670104980469 50 20 10 10 10 9.182286462991067 10.890533681675803 0.0 3 0.9920874527711012 13.864922014743916 8971.0 114.10449951810547 0.0 - - - - - - - 176.66666666666666 17 21 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2359 298 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7036.[MT7]-TAAFQALGLLSVAVR.3y8_1.heavy 554.334 / 814.515 12199.0 45.19670104980469 50 20 10 10 10 9.182286462991067 10.890533681675803 0.0 3 0.9920874527711012 13.864922014743916 12199.0 308.6347 0.0 - - - - - - - 161.95 24 20 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2361 299 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7037.[MT7]-LLVVGITDPDPDIR.2y4_1.heavy 833.978 / 500.283 4449.0 37.56630039215088 41 15 10 6 10 2.4633322116963425 40.59541767252589 0.033199310302734375 3 0.957570639911564 5.970098171472255 4449.0 27.678313536760186 0.0 - - - - - - - 229.8421052631579 8 19 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2363 299 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7037.[MT7]-LLVVGITDPDPDIR.2y6_1.heavy 833.978 / 712.362 3508.0 37.56630039215088 41 15 10 6 10 2.4633322116963425 40.59541767252589 0.033199310302734375 3 0.957570639911564 5.970098171472255 3508.0 9.539298245614034 0.0 - - - - - - - 717.2307692307693 7 13 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2365 299 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7037.[MT7]-LLVVGITDPDPDIR.2y10_1.heavy 833.978 / 1098.54 2567.0 37.56630039215088 41 15 10 6 10 2.4633322116963425 40.59541767252589 0.033199310302734375 3 0.957570639911564 5.970098171472255 2567.0 12.494170250529045 0.0 - - - - - - - 183.5 5 14 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2367 299 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7037.[MT7]-LLVVGITDPDPDIR.2y11_1.heavy 833.978 / 1197.61 941.0 37.56630039215088 41 15 10 6 10 2.4633322116963425 40.59541767252589 0.033199310302734375 3 0.957570639911564 5.970098171472255 941.0 6.878654970760234 0.0 - - - - - - - 0.0 1 0 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2369 300 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7170.[MT7]-QLLDSGLPSLLVR.2y9_1.heavy 777.97 / 941.578 N/A N/A - - - - - - - - - 0.0 - - - - - - - BIRC6 baculoviral IAP repeat-containing 6 2371 300 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7170.[MT7]-QLLDSGLPSLLVR.2y6_1.heavy 777.97 / 684.44 N/A N/A - - - - - - - - - 0.0 - - - - - - - BIRC6 baculoviral IAP repeat-containing 6 2373 300 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7170.[MT7]-QLLDSGLPSLLVR.2y10_1.heavy 777.97 / 1056.6 N/A N/A - - - - - - - - - 0.0 - - - - - - - BIRC6 baculoviral IAP repeat-containing 6 2375 300 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7170.[MT7]-QLLDSGLPSLLVR.2y11_1.heavy 777.97 / 1169.69 N/A N/A - - - - - - - - - 0.0 - - - - - - - BIRC6 baculoviral IAP repeat-containing 6 2377 301 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7031.[MT7]-DASAVSLSESK[MT7].3y3_1.heavy 461.252 / 507.289 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2379 301 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7031.[MT7]-DASAVSLSESK[MT7].3b4_1.heavy 461.252 / 489.242 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2381 301 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7031.[MT7]-DASAVSLSESK[MT7].3b5_1.heavy 461.252 / 588.311 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2383 301 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7031.[MT7]-DASAVSLSESK[MT7].3y4_1.heavy 461.252 / 594.321 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2385 302 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7032.[MT7]-TLVLLLGVDPSR.2y8_1.heavy 713.941 / 856.489 2022.0 41.68597412109375 44 18 10 6 10 5.538963431751366 18.053919516197453 0.0326995849609375 3 0.9858326900803469 10.35629954618461 2022.0 2.204603524229075 0.0 - - - - - - - 689.8571428571429 4 7 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2387 302 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7032.[MT7]-TLVLLLGVDPSR.2y9_1.heavy 713.941 / 969.573 2022.0 41.68597412109375 44 18 10 6 10 5.538963431751366 18.053919516197453 0.0326995849609375 3 0.9858326900803469 10.35629954618461 2022.0 22.50290322580645 0.0 - - - - - - - 148.0 4 24 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2389 302 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7032.[MT7]-TLVLLLGVDPSR.2b4_1.heavy 713.941 / 571.394 3301.0 41.68597412109375 44 18 10 6 10 5.538963431751366 18.053919516197453 0.0326995849609375 3 0.9858326900803469 10.35629954618461 3301.0 7.044399527664599 0.0 - - - - - - - 595.1428571428571 6 7 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2391 302 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7032.[MT7]-TLVLLLGVDPSR.2y7_1.heavy 713.941 / 743.405 1403.0 41.68597412109375 44 18 10 6 10 5.538963431751366 18.053919516197453 0.0326995849609375 3 0.9858326900803469 10.35629954618461 1403.0 2.717675544794189 2.0 - - - - - - - 235.1304347826087 4 23 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2393 303 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7029.[MT7]-HTFEEAEK[MT7].3y3_1.heavy 426.89 / 491.295 13397.0 18.38980007171631 43 18 10 5 10 5.686302759606051 17.586119527502618 0.04559898376464844 3 0.9832669873523858 9.527256237012391 13397.0 29.147062941803725 0.0 - - - - - - - 314.7142857142857 26 7 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2395 303 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7029.[MT7]-HTFEEAEK[MT7].3b4_1.heavy 426.89 / 659.327 4588.0 18.38980007171631 43 18 10 5 10 5.686302759606051 17.586119527502618 0.04559898376464844 3 0.9832669873523858 9.527256237012391 4588.0 15.876730245231606 0.0 - - - - - - - 238.9 9 10 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2397 303 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7029.[MT7]-HTFEEAEK[MT7].3b5_1.heavy 426.89 / 788.37 2202.0 18.38980007171631 43 18 10 5 10 5.686302759606051 17.586119527502618 0.04559898376464844 3 0.9832669873523858 9.527256237012391 2202.0 23.922815217391303 0.0 - - - - - - - 184.0 4 1 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2399 303 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7029.[MT7]-HTFEEAEK[MT7].3y4_1.heavy 426.89 / 620.337 4588.0 18.38980007171631 43 18 10 5 10 5.686302759606051 17.586119527502618 0.04559898376464844 3 0.9832669873523858 9.527256237012391 4588.0 13.751498637602179 1.0 - - - - - - - 265.3333333333333 9 9 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2401 304 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7028.[MT7]-IVEDWQK[MT7].2y5_1.heavy 603.342 / 849.422 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2403 304 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7028.[MT7]-IVEDWQK[MT7].2b4_1.heavy 603.342 / 601.331 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2405 304 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7028.[MT7]-IVEDWQK[MT7].2y3_1.heavy 603.342 / 605.353 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2407 304 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7028.[MT7]-IVEDWQK[MT7].2y6_1.heavy 603.342 / 948.491 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2409 305 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9877.[MT7]-ELSQNTDESGLNDEAIAK[MT7].3b4_1.heavy 741.372 / 602.327 2091.0 25.37470054626465 33 12 10 5 6 1.3648217350040728 44.34336365954931 0.04380035400390625 5 0.8824850476869133 3.5642493755429383 2091.0 2.3621980595516896 3.0 - - - - - - - 261.0 5 5 RFC1 replication factor C (activator 1) 1, 145kDa 2411 305 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9877.[MT7]-ELSQNTDESGLNDEAIAK[MT7].3b5_1.heavy 741.372 / 716.37 1046.0 25.37470054626465 33 12 10 5 6 1.3648217350040728 44.34336365954931 0.04380035400390625 5 0.8824850476869133 3.5642493755429383 1046.0 4.687943154273204 14.0 - - - - - - - 261.0 4 6 RFC1 replication factor C (activator 1) 1, 145kDa 2413 305 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9877.[MT7]-ELSQNTDESGLNDEAIAK[MT7].3y4_1.heavy 741.372 / 546.373 4705.0 25.37470054626465 33 12 10 5 6 1.3648217350040728 44.34336365954931 0.04380035400390625 5 0.8824850476869133 3.5642493755429383 4705.0 12.594646271510516 0.0 - - - - - - - 261.0 9 5 RFC1 replication factor C (activator 1) 1, 145kDa 2415 305 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A9877.[MT7]-ELSQNTDESGLNDEAIAK[MT7].3b7_1.heavy 741.372 / 932.444 3137.0 25.37470054626465 33 12 10 5 6 1.3648217350040728 44.34336365954931 0.04380035400390625 5 0.8824850476869133 3.5642493755429383 3137.0 16.697435880530097 0.0 - - - - - - - 261.0 6 7 RFC1 replication factor C (activator 1) 1, 145kDa 2417 306 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7165.[MT7]-DRIQALLK[MT7].3y3_1.heavy 415.602 / 517.383 4642.0 27.428800582885742 30 14 0 10 6 5.7981436944631195 17.246899226642835 0.0 5 0.9477124977084 5.373443262028767 4642.0 12.681329814595307 1.0 - - - - - - - 244.0 19 3 BIRC6 baculoviral IAP repeat-containing 6 2419 306 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7165.[MT7]-DRIQALLK[MT7].3b5_1.heavy 415.602 / 728.417 3665.0 27.428800582885742 30 14 0 10 6 5.7981436944631195 17.246899226642835 0.0 5 0.9477124977084 5.373443262028767 3665.0 21.01486598612089 0.0 - - - - - - - 342.0 7 5 BIRC6 baculoviral IAP repeat-containing 6 2421 306 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7165.[MT7]-DRIQALLK[MT7].3b3_1.heavy 415.602 / 529.321 977.0 27.428800582885742 30 14 0 10 6 5.7981436944631195 17.246899226642835 0.0 5 0.9477124977084 5.373443262028767 977.0 1.598159509202454 21.0 - - - - - - - 440.0 104 5 BIRC6 baculoviral IAP repeat-containing 6 2423 306 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7165.[MT7]-DRIQALLK[MT7].3y4_1.heavy 415.602 / 588.42 4153.0 27.428800582885742 30 14 0 10 6 5.7981436944631195 17.246899226642835 0.0 5 0.9477124977084 5.373443262028767 4153.0 9.048919441636158 1.0 - - - - - - - 314.0 8 7 BIRC6 baculoviral IAP repeat-containing 6 2425 307 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7166.[MT7]-VITDPSLSK[MT7].2y8_1.heavy 624.376 / 1004.57 1304.0 25.30900001525879 38 10 10 10 8 1.1233750020062456 55.36939298641013 0.0 4 0.8406114040279985 3.0492210257485093 1304.0 3.8868239810319523 4.0 - - - - - - - 261.0 6 3 BIRC6 baculoviral IAP repeat-containing 6 2427 307 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7166.[MT7]-VITDPSLSK[MT7].2y5_1.heavy 624.376 / 675.416 5997.0 25.30900001525879 38 10 10 10 8 1.1233750020062456 55.36939298641013 0.0 4 0.8406114040279985 3.0492210257485093 5997.0 11.506142218574428 0.0 - - - - - - - 261.0 11 4 BIRC6 baculoviral IAP repeat-containing 6 2429 307 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7166.[MT7]-VITDPSLSK[MT7].2b4_1.heavy 624.376 / 573.336 8343.0 25.30900001525879 38 10 10 10 8 1.1233750020062456 55.36939298641013 0.0 4 0.8406114040279985 3.0492210257485093 8343.0 5.918309030698374 0.0 - - - - - - - 261.0 16 3 BIRC6 baculoviral IAP repeat-containing 6 2431 307 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7166.[MT7]-VITDPSLSK[MT7].2y7_1.heavy 624.376 / 891.49 1825.0 25.30900001525879 38 10 10 10 8 1.1233750020062456 55.36939298641013 0.0 4 0.8406114040279985 3.0492210257485093 1825.0 5.3348579605421405 4.0 - - - - - - - 261.0 4 4 BIRC6 baculoviral IAP repeat-containing 6 2433 308 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7163.[MT7]-SIDLTVK[MT7].2y4_1.heavy 532.334 / 604.415 N/A N/A - - - - - - - - - 0.0 - - - - - - - BIRC6 baculoviral IAP repeat-containing 6 2435 308 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7163.[MT7]-SIDLTVK[MT7].2y5_1.heavy 532.334 / 719.442 N/A N/A - - - - - - - - - 0.0 - - - - - - - BIRC6 baculoviral IAP repeat-containing 6 2437 308 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7163.[MT7]-SIDLTVK[MT7].2b4_1.heavy 532.334 / 573.336 N/A N/A - - - - - - - - - 0.0 - - - - - - - BIRC6 baculoviral IAP repeat-containing 6 2439 308 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7163.[MT7]-SIDLTVK[MT7].2y6_1.heavy 532.334 / 832.526 N/A N/A - - - - - - - - - 0.0 - - - - - - - BIRC6 baculoviral IAP repeat-containing 6 2441 309 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7164.[MT7]-FLDSGPNK[MT7].2b3_1.heavy 583.326 / 520.289 15946.0 24.83799934387207 40 14 8 10 8 1.9128711531946252 44.74702716417049 0.0 4 0.9377163035007562 4.919204389809377 15946.0 27.85898798142584 1.0 - - - - - - - 261.0 31 1 BIRC6 baculoviral IAP repeat-containing 6 2443 309 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7164.[MT7]-FLDSGPNK[MT7].2y5_1.heavy 583.326 / 646.364 15423.0 24.83799934387207 40 14 8 10 8 1.9128711531946252 44.74702716417049 0.0 4 0.9377163035007562 4.919204389809377 15423.0 15.343408139843541 1.0 - - - - - - - 261.0 40 2 BIRC6 baculoviral IAP repeat-containing 6 2445 309 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7164.[MT7]-FLDSGPNK[MT7].2y3_1.heavy 583.326 / 502.311 3398.0 24.83799934387207 40 14 8 10 8 1.9128711531946252 44.74702716417049 0.0 4 0.9377163035007562 4.919204389809377 3398.0 0.6000000000000001 12.0 - - - - - - - 261.0 16 4 BIRC6 baculoviral IAP repeat-containing 6 2447 309 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7164.[MT7]-FLDSGPNK[MT7].2y7_1.heavy 583.326 / 874.475 6012.0 24.83799934387207 40 14 8 10 8 1.9128711531946252 44.74702716417049 0.0 4 0.9377163035007562 4.919204389809377 6012.0 8.04958637374644 1.0 - - - - - - - 261.0 12 5 BIRC6 baculoviral IAP repeat-containing 6 2449 310 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7169.[MT7]-DASTLGLSQIK[MT7].3b6_1.heavy 474.28 / 689.359 6086.0 28.645299911499023 43 17 8 10 8 2.672690745781811 29.652146637309613 0.0 4 0.9762399612717897 7.990521469083492 6086.0 10.551327720122279 0.0 - - - - - - - 354.14285714285717 12 7 BIRC6 baculoviral IAP repeat-containing 6 2451 310 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7169.[MT7]-DASTLGLSQIK[MT7].3b4_1.heavy 474.28 / 519.253 3381.0 28.645299911499023 43 17 8 10 8 2.672690745781811 29.652146637309613 0.0 4 0.9762399612717897 7.990521469083492 3381.0 15.394836659275684 3.0 - - - - - - - 321.85714285714283 12 7 BIRC6 baculoviral IAP repeat-containing 6 2453 310 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7169.[MT7]-DASTLGLSQIK[MT7].3b5_1.heavy 474.28 / 632.337 1127.0 28.645299911499023 43 17 8 10 8 2.672690745781811 29.652146637309613 0.0 4 0.9762399612717897 7.990521469083492 1127.0 2.5239689578713964 15.0 - - - - - - - 292.8 15 10 BIRC6 baculoviral IAP repeat-containing 6 2455 310 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7169.[MT7]-DASTLGLSQIK[MT7].3y4_1.heavy 474.28 / 619.39 4959.0 28.645299911499023 43 17 8 10 8 2.672690745781811 29.652146637309613 0.0 4 0.9762399612717897 7.990521469083492 4959.0 10.998818536060561 0.0 - - - - - - - 300.3333333333333 9 6 BIRC6 baculoviral IAP repeat-containing 6 2457 311 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7167.[MT7]-VLDTSDALK[MT7].2y8_1.heavy 625.366 / 1006.55 N/A N/A - - - - - - - - - 0.0 - - - - - - - BIRC6 baculoviral IAP repeat-containing 6 2459 311 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7167.[MT7]-VLDTSDALK[MT7].2b6_1.heavy 625.366 / 775.395 N/A N/A - - - - - - - - - 0.0 - - - - - - - BIRC6 baculoviral IAP repeat-containing 6 2461 311 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7167.[MT7]-VLDTSDALK[MT7].2y6_1.heavy 625.366 / 778.443 N/A N/A - - - - - - - - - 0.0 - - - - - - - BIRC6 baculoviral IAP repeat-containing 6 2463 311 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7167.[MT7]-VLDTSDALK[MT7].2y7_1.heavy 625.366 / 893.47 N/A N/A - - - - - - - - - 0.0 - - - - - - - BIRC6 baculoviral IAP repeat-containing 6 2465 312 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7168.[MT7]-VSDTPSITAK[MT7].2b4_1.heavy 653.876 / 547.284 N/A N/A - - - - - - - - - 0.0 - - - - - - - BIRC6 baculoviral IAP repeat-containing 6 2467 312 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7168.[MT7]-VSDTPSITAK[MT7].2y9_1.heavy 653.876 / 1063.58 N/A N/A - - - - - - - - - 0.0 - - - - - - - BIRC6 baculoviral IAP repeat-containing 6 2469 312 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7168.[MT7]-VSDTPSITAK[MT7].2y6_1.heavy 653.876 / 760.469 N/A N/A - - - - - - - - - 0.0 - - - - - - - BIRC6 baculoviral IAP repeat-containing 6 2471 312 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7168.[MT7]-VSDTPSITAK[MT7].2y7_1.heavy 653.876 / 861.516 N/A N/A - - - - - - - - - 0.0 - - - - - - - BIRC6 baculoviral IAP repeat-containing 6 2473 313 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7026.[MT7]-DIQDGLLK[MT7].2y4_1.heavy 595.355 / 574.404 6753.0 28.10569953918457 47 17 10 10 10 3.5420122258333184 28.23253947873466 0.0 3 0.9726580096776611 7.4465098708266755 6753.0 6.640624661855617 1.0 - - - - - - - 241.0 18 1 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2475 313 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7026.[MT7]-DIQDGLLK[MT7].2y5_1.heavy 595.355 / 689.431 3377.0 28.10569953918457 47 17 10 10 10 3.5420122258333184 28.23253947873466 0.0 3 0.9726580096776611 7.4465098708266755 3377.0 3.2627278196596516 2.0 - - - - - - - 289.2 6 5 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2477 313 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7026.[MT7]-DIQDGLLK[MT7].2b4_1.heavy 595.355 / 616.306 6271.0 28.10569953918457 47 17 10 10 10 3.5420122258333184 28.23253947873466 0.0 3 0.9726580096776611 7.4465098708266755 6271.0 7.175818149660845 0.0 - - - - - - - 361.5 12 4 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2479 313 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7026.[MT7]-DIQDGLLK[MT7].2b5_1.heavy 595.355 / 673.327 2412.0 28.10569953918457 47 17 10 10 10 3.5420122258333184 28.23253947873466 0.0 3 0.9726580096776611 7.4465098708266755 2412.0 2.55633966044892 4.0 - - - - - - - 844.5 8 10 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2481 314 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7027.[MT7]-TLDQSPELR.2y4_1.heavy 601.828 / 514.298 2512.0 23.345999717712402 34 14 9 5 6 1.4005246832279956 46.36392075322206 0.04400062561035156 6 0.9399523332089058 5.01091199697132 2512.0 3.4268745852687457 5.0 - - - - - - - 251.0 6 4 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2483 314 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7027.[MT7]-TLDQSPELR.2y8_1.heavy 601.828 / 957.5 2009.0 23.345999717712402 34 14 9 5 6 1.4005246832279956 46.36392075322206 0.04400062561035156 6 0.9399523332089058 5.01091199697132 2009.0 11.205577689243029 0.0 - - - - - - - 251.0 4 1 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2485 314 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7027.[MT7]-TLDQSPELR.2y6_1.heavy 601.828 / 729.389 3516.0 23.345999717712402 34 14 9 5 6 1.4005246832279956 46.36392075322206 0.04400062561035156 6 0.9399523332089058 5.01091199697132 3516.0 10.38428883933761 1.0 - - - - - - - 251.0 7 7 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2487 314 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7027.[MT7]-TLDQSPELR.2y7_1.heavy 601.828 / 844.416 1005.0 23.345999717712402 34 14 9 5 6 1.4005246832279956 46.36392075322206 0.04400062561035156 6 0.9399523332089058 5.01091199697132 1005.0 0.4 18.0 - - - - - - - 251.0 8 4 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2489 315 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7024.[MT7]-GFDETLAK[MT7].2y4_1.heavy 584.826 / 576.384 11456.0 25.74340057373047 45 15 10 10 10 4.490677286799002 22.26835588786674 0.0 3 0.9579770971485806 5.999107316228039 11456.0 12.906366448938009 0.0 - - - - - - - 260.0 22 1 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2491 315 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7024.[MT7]-GFDETLAK[MT7].2y5_1.heavy 584.826 / 705.426 21090.0 25.74340057373047 45 15 10 10 10 4.490677286799002 22.26835588786674 0.0 3 0.9579770971485806 5.999107316228039 21090.0 36.46685878962536 0.0 - - - - - - - 706.7142857142857 42 7 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2493 315 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7024.[MT7]-GFDETLAK[MT7].2b4_1.heavy 584.826 / 593.269 9373.0 25.74340057373047 45 15 10 10 10 4.490677286799002 22.26835588786674 0.0 3 0.9579770971485806 5.999107316228039 9373.0 6.991725806451613 1.0 - - - - - - - 618.5 18 8 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2495 315 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7024.[MT7]-GFDETLAK[MT7].2b5_1.heavy 584.826 / 694.316 9634.0 25.74340057373047 45 15 10 10 10 4.490677286799002 22.26835588786674 0.0 3 0.9579770971485806 5.999107316228039 9634.0 35.379069240618534 0.0 - - - - - - - 260.0 19 5 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2497 316 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7025.[MT7]-RHAAVLVLR.3b4_1.heavy 393.592 / 580.344 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2499 316 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7025.[MT7]-RHAAVLVLR.3b5_1.heavy 393.592 / 679.412 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2501 316 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7025.[MT7]-RHAAVLVLR.3y4_1.heavy 393.592 / 500.355 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2503 316 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7025.[MT7]-RHAAVLVLR.3y5_1.heavy 393.592 / 599.424 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2505 317 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7161.[MT7]-LISEQK[MT7].2y4_1.heavy 503.313 / 635.348 4158.0 24.752599716186523 25 11 0 10 4 1.369085671470557 58.82320596913009 0.0 8 0.8748492037459439 3.4515052765779317 4158.0 8.950463215258855 3.0 - - - - - - - 338.84615384615387 22 13 BIRC6 baculoviral IAP repeat-containing 6 2507 317 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7161.[MT7]-LISEQK[MT7].2y5_1.heavy 503.313 / 748.432 10273.0 24.752599716186523 25 11 0 10 4 1.369085671470557 58.82320596913009 0.0 8 0.8748492037459439 3.4515052765779317 10273.0 14.167874567146928 4.0 - - - - - - - 285.6666666666667 296 6 BIRC6 baculoviral IAP repeat-containing 6 2509 317 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7161.[MT7]-LISEQK[MT7].2b4_1.heavy 503.313 / 587.352 2935.0 24.752599716186523 25 11 0 10 4 1.369085671470557 58.82320596913009 0.0 8 0.8748492037459439 3.4515052765779317 2935.0 4.798365122615804 3.0 - - - - - - - 349.57142857142856 5 7 BIRC6 baculoviral IAP repeat-containing 6 2511 317 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7161.[MT7]-LISEQK[MT7].2y3_1.heavy 503.313 / 548.316 734.0 24.752599716186523 25 11 0 10 4 1.369085671470557 58.82320596913009 0.0 8 0.8748492037459439 3.4515052765779317 734.0 0.6841864268192966 31.0 - - - - - - - 397.5 6 8 BIRC6 baculoviral IAP repeat-containing 6 2513 318 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7022.[MT7]-ELEFQK[MT7].2b3_1.heavy 541.31 / 516.279 3875.0 25.96820068359375 31 15 2 10 4 2.0253268785380096 33.66802240052544 0.0 7 0.9538406810685541 5.7219991946341136 3875.0 4.993224557522124 5.0 - - - - - - - 258.0 8 2 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2515 318 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7022.[MT7]-ELEFQK[MT7].2y4_1.heavy 541.31 / 695.385 2325.0 25.96820068359375 31 15 2 10 4 2.0253268785380096 33.66802240052544 0.0 7 0.9538406810685541 5.7219991946341136 2325.0 5.666970824774988 2.0 - - - - - - - 627.5714285714286 4 7 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2517 318 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7022.[MT7]-ELEFQK[MT7].2y5_1.heavy 541.31 / 808.469 3100.0 25.96820068359375 31 15 2 10 4 2.0253268785380096 33.66802240052544 0.0 7 0.9538406810685541 5.7219991946341136 3100.0 4.107302481083934 3.0 - - - - - - - 258.0 22 4 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2519 318 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7022.[MT7]-ELEFQK[MT7].2y3_1.heavy 541.31 / 566.342 4908.0 25.96820068359375 31 15 2 10 4 2.0253268785380096 33.66802240052544 0.0 7 0.9538406810685541 5.7219991946341136 4908.0 7.218627384400279 0.0 - - - - - - - 620.2 9 10 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2521 319 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7162.[MT7]-AVDSTLK[MT7].2y4_1.heavy 511.31 / 592.379 11791.0 20.2903995513916 45 17 8 10 10 4.254345245227462 23.50537961444956 0.0 3 0.9717350539956213 7.323353610724582 11791.0 20.8 0.0 - - - - - - - 407.8 23 5 BIRC6 baculoviral IAP repeat-containing 6 2523 319 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7162.[MT7]-AVDSTLK[MT7].2y5_1.heavy 511.31 / 707.406 9523.0 20.2903995513916 45 17 8 10 10 4.254345245227462 23.50537961444956 0.0 3 0.9717350539956213 7.323353610724582 9523.0 32.37399558498896 0.0 - - - - - - - 311.75 19 8 BIRC6 baculoviral IAP repeat-containing 6 2525 319 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7162.[MT7]-AVDSTLK[MT7].2y3_1.heavy 511.31 / 505.347 7482.0 20.2903995513916 45 17 8 10 10 4.254345245227462 23.50537961444956 0.0 3 0.9717350539956213 7.323353610724582 7482.0 3.3003970004411114 2.0 - - - - - - - 2234.8571428571427 31 7 BIRC6 baculoviral IAP repeat-containing 6 2527 319 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7162.[MT7]-AVDSTLK[MT7].2y6_1.heavy 511.31 / 806.474 9070.0 20.2903995513916 45 17 8 10 10 4.254345245227462 23.50537961444956 0.0 3 0.9717350539956213 7.323353610724582 9070.0 25.91766004415011 0.0 - - - - - - - 272.2 18 10 BIRC6 baculoviral IAP repeat-containing 6 2529 320 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7023.[MT7]-ELAIC[CAM]TVGR.2y6_1.heavy 581.822 / 705.371 1967.0 27.612499237060547 43 17 10 10 6 5.859412481878265 17.06655749348175 0.0 5 0.9789657114961169 8.494430112012873 1967.0 7.196341463414634 7.0 - - - - - - - 351.42857142857144 4 7 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2531 320 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7023.[MT7]-ELAIC[CAM]TVGR.2y8_1.heavy 581.822 / 889.492 3689.0 27.612499237060547 43 17 10 10 6 5.859412481878265 17.06655749348175 0.0 5 0.9789657114961169 8.494430112012873 3689.0 13.496341463414634 1.0 - - - - - - - 369.0 7 8 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2533 320 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7023.[MT7]-ELAIC[CAM]TVGR.2y5_1.heavy 581.822 / 592.287 1476.0 27.612499237060547 43 17 10 10 6 5.859412481878265 17.06655749348175 0.0 5 0.9789657114961169 8.494430112012873 1476.0 1.92 17.0 - - - - - - - 355.3333333333333 5 9 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2535 320 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7023.[MT7]-ELAIC[CAM]TVGR.2y7_1.heavy 581.822 / 776.408 3689.0 27.612499237060547 43 17 10 10 6 5.859412481878265 17.06655749348175 0.0 5 0.9789657114961169 8.494430112012873 3689.0 8.492334432774932 0.0 - - - - - - - 328.0 7 9 MTOR mechanistic target of rapamycin (serine/threonine kinase) 2537 321 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7020.[MT7]-HAAVLVLR.2b4_1.heavy 511.833 / 523.311 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2539 321 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7020.[MT7]-HAAVLVLR.2y6_1.heavy 511.833 / 670.461 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2541 321 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7020.[MT7]-HAAVLVLR.2b5_1.heavy 511.833 / 636.395 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2543 321 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7020.[MT7]-HAAVLVLR.2y7_1.heavy 511.833 / 741.498 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2545 322 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7021.[MT7]-SRNEETR.2y5_1.heavy 518.269 / 648.295 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2547 322 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7021.[MT7]-SRNEETR.2b4_1.heavy 518.269 / 631.328 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2549 322 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7021.[MT7]-SRNEETR.2b6_1.heavy 518.269 / 861.418 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2551 322 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7021.[MT7]-SRNEETR.2b5_1.heavy 518.269 / 760.371 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2553 323 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7019.[MT7]-AALETVDR.2y5_1.heavy 509.786 / 619.305 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2555 323 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7019.[MT7]-AALETVDR.2b4_1.heavy 509.786 / 529.31 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2557 323 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7019.[MT7]-AALETVDR.2y6_1.heavy 509.786 / 732.389 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2559 323 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7019.[MT7]-AALETVDR.2y7_1.heavy 509.786 / 803.426 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2561 324 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7018.[MT7]-QIPQLK[MT7].2y4_1.heavy 507.831 / 629.41 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2563 324 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7018.[MT7]-QIPQLK[MT7].2y5_1.heavy 507.831 / 742.494 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2565 324 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7018.[MT7]-QIPQLK[MT7].2b4_1.heavy 507.831 / 611.363 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase) 2567 324 20120510_pMRM_Cell_cycle_and_ub_set01_03 20120510_pMRM_Cell_cycle_and_ub_set01_03 A7018.[MT7]-QIPQLK[MT7].2y3_1.heavy 507.831 / 532.357 N/A N/A - - - - - - - - - 0.0 - - - - - - - MTOR mechanistic target of rapamycin (serine/threonine kinase)