Index Sample Index Original Filename Sample Name Sample ID Sample Comment Sample Type Acquisition Date & Time Rack Number Plate Number Vial Number Dilution Factor Injection Volume Operator Name Acq. Method Name IS Component Name Component Index Component Comment IS Comment Mass Info IS Mass Info IS Name Component Group Name Conc. Units Failed Query IS Failed Query Peak Comment IS Peak Comment Actual Concentration IS Actual Concentration Concentration Ratio Expected RT IS Expected RT Integration Type IS Integration Type Area IS Area Corrected Area IS Corrected Area Area Ratio Height IS Height Corrected Height IS Corrected Height Height Ratio Area / Height IS Area / Height Corrected Area/Height IS Corrected Area/Height Region Height IS Region Height Quality IS Quality Retention Time IS Retention Time Start Time IS Start Time End Time IS End Time Total Width IS Total Width Width at 50% IS Width at 50% Signal / Noise IS Signal / Noise Baseline Delta / Height IS Baseline Delta / Height Modified Relative RT Used Calculated Concentration Accuracy SF Peak Width Confidence SF Model Source SF Candidate Model Quality SF Asymmetry SF Saturated SF Integration Quality SF Group Confidence SF Num Peaks Score_IMPAQT MSSimScore_IMPAQT HeightScore_IMPAQT RTminScore_IMPAQT RankScore_IMPAQT MSSim_IMPAQT MSSimSita_IMPAQT RTminDiff_IMPAQT RankSum_IMPAQT CosSimilarity_IMPAQT CosSimilaritySita_IMPAQT Height_IMPAQT InterfereTrans_IMPAQT InterfereTransAll_IMPAQT LScore_IMPAQT LRTminScore_IMPAQT LSNScore_IMPAQT LSNAllScore_IMPAQT HLSimScore_IMPAQT HLSim_IMPAQT HLSimSita_IMPAQT BaseLine_IMPAQT BaseLineUnitNum_IMPAQT BaseLineMaxCount_IMPAQT Symbol Description 1 1 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A31.[MT7]-EVGPK[MT7].2b3_1.heavy 409.255 / 430.242 6680.0 15.754799842834473 35 11 10 10 4 0.6834104399118818 82.48099175461289 0.0 8 0.8672081820930841 3.348492555803664 6680.0 38.23221336511957 1.0 - - - - - - - 795.2857142857143 13 7 CHEK2 CHK2 checkpoint homolog (S. pombe) 3 1 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A31.[MT7]-EVGPK[MT7].2y4_1.heavy 409.255 / 544.357 40082.0 15.754799842834473 35 11 10 10 4 0.6834104399118818 82.48099175461289 0.0 8 0.8672081820930841 3.348492555803664 40082.0 82.10867924528301 0.0 - - - - - - - 288.77777777777777 80 9 CHEK2 CHK2 checkpoint homolog (S. pombe) 5 1 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A31.[MT7]-EVGPK[MT7].2y3_1.heavy 409.255 / 445.289 34701.0 15.754799842834473 35 11 10 10 4 0.6834104399118818 82.48099175461289 0.0 8 0.8672081820930841 3.348492555803664 34701.0 46.74164870689654 0.0 - - - - - - - 848.2857142857143 69 7 CHEK2 CHK2 checkpoint homolog (S. pombe) 7 1 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A31.[MT7]-EVGPK[MT7].2y1_1.heavy 409.255 / 291.215 10577.0 15.754799842834473 35 11 10 10 4 0.6834104399118818 82.48099175461289 0.0 8 0.8672081820930841 3.348492555803664 10577.0 3.234722834828982 11.0 - - - - - - - 1299.0 27 5 CHEK2 CHK2 checkpoint homolog (S. pombe) 9 2 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9471.[MT7]-IFDLIGLPPEDDWPR.2b3_1.heavy 964.008 / 520.289 21603.0 45.33010005950928 29 8 10 3 8 0.8654332072853195 75.95891087518444 0.06779861450195312 4 0.7876128343256455 2.6290179678894554 21603.0 1.6625685425685426 1.0 - - - - - - - 243.5 43 2 CDK4 cyclin-dependent kinase 4 11 2 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9471.[MT7]-IFDLIGLPPEDDWPR.2y8_1.heavy 964.008 / 1011.45 40931.0 45.33010005950928 29 8 10 3 8 0.8654332072853195 75.95891087518444 0.06779861450195312 4 0.7876128343256455 2.6290179678894554 40931.0 2.686088221365266 1.0 - - - - - - - 893.0 87 1 CDK4 cyclin-dependent kinase 4 13 2 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9471.[MT7]-IFDLIGLPPEDDWPR.2b4_1.heavy 964.008 / 633.373 21278.0 45.33010005950928 29 8 10 3 8 0.8654332072853195 75.95891087518444 0.06779861450195312 4 0.7876128343256455 2.6290179678894554 21278.0 1.8386692590192266 1.0 - - - - - - - 761.375 42 8 CDK4 cyclin-dependent kinase 4 15 2 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9471.[MT7]-IFDLIGLPPEDDWPR.2y10_1.heavy 964.008 / 1181.56 16567.0 45.33010005950928 29 8 10 3 8 0.8654332072853195 75.95891087518444 0.06779861450195312 4 0.7876128343256455 2.6290179678894554 16567.0 14.07854940325777 0.0 - - - - - - - 243.75 33 4 CDK4 cyclin-dependent kinase 4 17 3 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9470.[MT7]-RLQEFLADMGLPLK[MT7].3y3_1.heavy 640.372 / 501.352 115130.0 42.25850009918213 36 12 10 6 8 0.7625106071681818 81.79879940270546 0.035198211669921875 4 0.8834030541221056 3.5785392223172217 115130.0 210.63557929402316 0.0 - - - - - - - 397.6666666666667 230 3 CDC45 cell division cycle 45 homolog (S. cerevisiae) 19 3 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9470.[MT7]-RLQEFLADMGLPLK[MT7].3b5_1.heavy 640.372 / 818.464 6443.0 42.25850009918213 36 12 10 6 8 0.7625106071681818 81.79879940270546 0.035198211669921875 4 0.8834030541221056 3.5785392223172217 6443.0 16.917374301675977 1.0 - - - - - - - 266.2307692307692 12 13 CDC45 cell division cycle 45 homolog (S. cerevisiae) 21 3 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9470.[MT7]-RLQEFLADMGLPLK[MT7].3b8_1.heavy 640.372 / 1117.61 12527.0 42.25850009918213 36 12 10 6 8 0.7625106071681818 81.79879940270546 0.035198211669921875 4 0.8834030541221056 3.5785392223172217 12527.0 99.4844229766177 1.0 - - - - - - - 166.9 25 10 CDC45 cell division cycle 45 homolog (S. cerevisiae) 23 3 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9470.[MT7]-RLQEFLADMGLPLK[MT7].3b8_2.heavy 640.372 / 559.31 53211.0 42.25850009918213 36 12 10 6 8 0.7625106071681818 81.79879940270546 0.035198211669921875 4 0.8834030541221056 3.5785392223172217 53211.0 209.25898163449637 1.0 - - - - - - - 204.42857142857142 108 7 CDC45 cell division cycle 45 homolog (S. cerevisiae) 25 4 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A7202.[MT7]-LQNETLHLAVNYIDR.2y8_1.heavy 972.027 / 963.526 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNA2 cyclin A2 27 4 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A7202.[MT7]-LQNETLHLAVNYIDR.2b4_1.heavy 972.027 / 629.338 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNA2 cyclin A2 29 4 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A7202.[MT7]-LQNETLHLAVNYIDR.2y9_1.heavy 972.027 / 1100.58 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNA2 cyclin A2 31 4 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A7202.[MT7]-LQNETLHLAVNYIDR.2y7_1.heavy 972.027 / 850.442 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNA2 cyclin A2 33 5 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9477.[MT7]-NELLGTASVNLSNVLK[MT7].3b4_1.heavy 654.049 / 614.363 25601.0 37.63370132446289 43 13 10 10 10 1.1753962567393352 56.71846093130037 0.0 3 0.9203890905292654 4.34462065432021 25601.0 36.82796739466718 0.0 - - - - - - - 788.0 51 12 WWP2 WW domain containing E3 ubiquitin protein ligase 2 35 5 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9477.[MT7]-NELLGTASVNLSNVLK[MT7].3b5_1.heavy 654.049 / 671.385 11619.0 37.63370132446289 43 13 10 10 10 1.1753962567393352 56.71846093130037 0.0 3 0.9203890905292654 4.34462065432021 11619.0 39.90959390862943 0.0 - - - - - - - 703.5714285714286 23 7 WWP2 WW domain containing E3 ubiquitin protein ligase 2 37 5 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9477.[MT7]-NELLGTASVNLSNVLK[MT7].3b3_1.heavy 654.049 / 501.279 20875.0 37.63370132446289 43 13 10 10 10 1.1753962567393352 56.71846093130037 0.0 3 0.9203890905292654 4.34462065432021 20875.0 34.70820641903824 0.0 - - - - - - - 831.7777777777778 41 9 WWP2 WW domain containing E3 ubiquitin protein ligase 2 39 5 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9477.[MT7]-NELLGTASVNLSNVLK[MT7].3y5_1.heavy 654.049 / 704.442 29737.0 37.63370132446289 43 13 10 10 10 1.1753962567393352 56.71846093130037 0.0 3 0.9203890905292654 4.34462065432021 29737.0 83.70186390668148 0.0 - - - - - - - 246.25 59 4 WWP2 WW domain containing E3 ubiquitin protein ligase 2 41 6 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A28.[MT7]-APPQTR.2y4_1.heavy 407.239 / 501.278 10502.0 13.559925079345703 41 14 10 7 10 0.8658649019346165 70.79379537701564 0.028499603271484375 3 0.9492056113096616 5.452539594155888 10502.0 18.2606891025641 1.0 - - - - - - - 184.88888888888889 21 9 E2F2 E2F transcription factor 2 43 6 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A28.[MT7]-APPQTR.2y5_1.heavy 407.239 / 598.331 71955.0 13.559925079345703 41 14 10 7 10 0.8658649019346165 70.79379537701564 0.028499603271484375 3 0.9492056113096616 5.452539594155888 71955.0 29.15963957722097 0.0 - - - - - - - 169.0 143 8 E2F2 E2F transcription factor 2 45 6 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A28.[MT7]-APPQTR.2b4_1.heavy 407.239 / 538.311 6343.0 13.559925079345703 41 14 10 7 10 0.8658649019346165 70.79379537701564 0.028499603271484375 3 0.9492056113096616 5.452539594155888 6343.0 2.144889221635391 13.0 - - - - - - - 260.0 36 4 E2F2 E2F transcription factor 2 47 6 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A28.[MT7]-APPQTR.2b1_1.heavy 407.239 / 216.146 32650.0 13.559925079345703 41 14 10 7 10 0.8658649019346165 70.79379537701564 0.028499603271484375 3 0.9492056113096616 5.452539594155888 32650.0 23.231763060624083 0.0 - - - - - - - 653.7142857142857 65 7 E2F2 E2F transcription factor 2 49 7 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A25.[MT7]-FAATVR.2y4_1.heavy 404.743 / 446.272 18682.0 21.96885061264038 42 18 10 6 8 3.3684276550869834 21.78499937074415 0.03740119934082031 4 0.9825474018994195 9.328217516851915 18682.0 30.179827799415214 0.0 - - - - - - - 1127.4285714285713 37 7 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 51 7 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A25.[MT7]-FAATVR.2b3_1.heavy 404.743 / 434.252 18682.0 21.96885061264038 42 18 10 6 8 3.3684276550869834 21.78499937074415 0.03740119934082031 4 0.9825474018994195 9.328217516851915 18682.0 20.474560626601843 0.0 - - - - - - - 263.0 37 4 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 53 7 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A25.[MT7]-FAATVR.2y5_1.heavy 404.743 / 517.309 125772.0 21.96885061264038 42 18 10 6 8 3.3684276550869834 21.78499937074415 0.03740119934082031 4 0.9825474018994195 9.328217516851915 125772.0 42.31884172558978 0.0 - - - - - - - 263.0 251 1 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 55 7 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A25.[MT7]-FAATVR.2b4_1.heavy 404.743 / 535.3 27891.0 21.96885061264038 42 18 10 6 8 3.3684276550869834 21.78499937074415 0.03740119934082031 4 0.9825474018994195 9.328217516851915 27891.0 8.175000170725212 1.0 - - - - - - - 789.0 75 3 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 57 8 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A24.[MT7]-NAVSK[MT7].2b3_1.heavy 403.752 / 429.258 16623.0 14.567299842834473 43 13 10 10 10 3.604366214545512 21.77130055005387 0.0 3 0.915418032870376 4.213216240720897 16623.0 13.442916786161826 0.0 - - - - - - - 308.9166666666667 33 12 USP43;ANAPC7 ubiquitin specific peptidase 43;anaphase promoting complex subunit 7 59 8 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A24.[MT7]-NAVSK[MT7].2y4_1.heavy 403.752 / 548.352 412.0 14.567299842834473 43 13 10 10 10 3.604366214545512 21.77130055005387 0.0 3 0.915418032870376 4.213216240720897 412.0 0.0799611838913149 48.0 - - - - - - - 704.125 31 8 USP43;ANAPC7 ubiquitin specific peptidase 43;anaphase promoting complex subunit 7 61 8 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A24.[MT7]-NAVSK[MT7].2y3_1.heavy 403.752 / 477.315 15662.0 14.567299842834473 43 13 10 10 10 3.604366214545512 21.77130055005387 0.0 3 0.915418032870376 4.213216240720897 15662.0 24.79139579984517 1.0 - - - - - - - 237.1818181818182 31 11 USP43;ANAPC7 ubiquitin specific peptidase 43;anaphase promoting complex subunit 7 63 8 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A24.[MT7]-NAVSK[MT7].2y2_1.heavy 403.752 / 378.247 38604.0 14.567299842834473 43 13 10 10 10 3.604366214545512 21.77130055005387 0.0 3 0.915418032870376 4.213216240720897 38604.0 42.36008433703541 0.0 - - - - - - - 219.8 77 5 USP43;ANAPC7 ubiquitin specific peptidase 43;anaphase promoting complex subunit 7 65 9 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A22.[MT7]-TIGVK[MT7].2b3_1.heavy 403.273 / 416.263 10120.0 20.262699127197266 47 17 10 10 10 4.032545445670811 18.816895570002202 0.0 3 0.9757511260745081 7.909245538974912 10120.0 28.689709543908872 1.0 - - - - - - - 881.1428571428571 20 7 PIAS4;SORT1 protein inhibitor of activated STAT, 4;sortilin 1 67 9 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A22.[MT7]-TIGVK[MT7].2y4_1.heavy 403.273 / 560.389 38011.0 20.262699127197266 47 17 10 10 10 4.032545445670811 18.816895570002202 0.0 3 0.9757511260745081 7.909245538974912 38011.0 25.362126653857352 0.0 - - - - - - - 423.42857142857144 76 7 PIAS4;SORT1 protein inhibitor of activated STAT, 4;sortilin 1 69 9 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A22.[MT7]-TIGVK[MT7].2b4_1.heavy 403.273 / 515.331 9379.0 20.262699127197266 47 17 10 10 10 4.032545445670811 18.816895570002202 0.0 3 0.9757511260745081 7.909245538974912 9379.0 20.59275933075933 3.0 - - - - - - - 370.5 18 8 PIAS4;SORT1 protein inhibitor of activated STAT, 4;sortilin 1 71 9 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A22.[MT7]-TIGVK[MT7].2y3_1.heavy 403.273 / 447.305 33568.0 20.262699127197266 47 17 10 10 10 4.032545445670811 18.816895570002202 0.0 3 0.9757511260745081 7.909245538974912 33568.0 40.700591593470385 1.0 - - - - - - - 296.4 67 5 PIAS4;SORT1 protein inhibitor of activated STAT, 4;sortilin 1 73 10 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A41.[MT7]-DIGAGK[MT7].2y4_1.heavy 424.758 / 476.295 46688.0 16.655299186706543 37 20 6 5 6 7.995951363332539 12.50632919787073 0.04780006408691406 6 0.9914106294330611 13.306699501775931 46688.0 150.94249112864108 0.0 - - - - - - - 731.6 93 10 HDAC1;HDAC2 histone deacetylase 1;histone deacetylase 2 75 10 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A41.[MT7]-DIGAGK[MT7].2y5_1.heavy 424.758 / 589.379 35610.0 16.655299186706543 37 20 6 5 6 7.995951363332539 12.50632919787073 0.04780006408691406 6 0.9914106294330611 13.306699501775931 35610.0 45.868759499424705 0.0 - - - - - - - 396.0 71 3 HDAC1;HDAC2 histone deacetylase 1;histone deacetylase 2 77 10 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A41.[MT7]-DIGAGK[MT7].2b4_1.heavy 424.758 / 501.279 7913.0 16.655299186706543 37 20 6 5 6 7.995951363332539 12.50632919787073 0.04780006408691406 6 0.9914106294330611 13.306699501775931 7913.0 6.54489245991718 5.0 - - - - - - - 396.0 138 1 HDAC1;HDAC2 histone deacetylase 1;histone deacetylase 2 79 10 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A41.[MT7]-DIGAGK[MT7].2b5_1.heavy 424.758 / 558.3 4748.0 16.655299186706543 37 20 6 5 6 7.995951363332539 12.50632919787073 0.04780006408691406 6 0.9914106294330611 13.306699501775931 4748.0 2.9628376759741775 4.0 - - - - - - - 297.0 63 2 HDAC1;HDAC2 histone deacetylase 1;histone deacetylase 2 81 11 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9462.[MT7]-QFHIIVC[CAM]GLDSIIAR.3b3_1.heavy 629.353 / 557.295 129442.0 40.37190055847168 46 20 10 6 10 35.35629397784417 2.828350733328116 0.03839874267578125 3 0.9998448086328301 99.06562264261225 129442.0 129.7003114310576 0.0 - - - - - - - 453.0 258 2 UBA3 ubiquitin-like modifier activating enzyme 3 83 11 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9462.[MT7]-QFHIIVC[CAM]GLDSIIAR.3y8_1.heavy 629.353 / 844.489 46218.0 40.37190055847168 46 20 10 6 10 35.35629397784417 2.828350733328116 0.03839874267578125 3 0.9998448086328301 99.06562264261225 46218.0 107.12218603937463 0.0 - - - - - - - 332.2 92 10 UBA3 ubiquitin-like modifier activating enzyme 3 85 11 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9462.[MT7]-QFHIIVC[CAM]GLDSIIAR.3y5_1.heavy 629.353 / 559.356 45916.0 40.37190055847168 46 20 10 6 10 35.35629397784417 2.828350733328116 0.03839874267578125 3 0.9998448086328301 99.06562264261225 45916.0 150.29789273694496 0.0 - - - - - - - 215.71428571428572 91 7 UBA3 ubiquitin-like modifier activating enzyme 3 87 11 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9462.[MT7]-QFHIIVC[CAM]GLDSIIAR.3y9_1.heavy 629.353 / 1004.52 51958.0 40.37190055847168 46 20 10 6 10 35.35629397784417 2.828350733328116 0.03839874267578125 3 0.9998448086328301 99.06562264261225 51958.0 362.44432671081677 0.0 - - - - - - - 211.4 103 5 UBA3 ubiquitin-like modifier activating enzyme 3 89 12 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9463.[MT7]-GIGLTLEQALQFWK[MT7].3b6_1.heavy 631.368 / 699.452 91389.0 48.0098991394043 44 14 10 10 10 1.8332545598906345 43.48312988947768 0.0 3 0.9365571792242606 4.873577453377688 91389.0 351.6403573964497 0.0 - - - - - - - 747.5714285714286 182 7 PRIM2 primase, DNA, polypeptide 2 (58kDa) 91 12 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9463.[MT7]-GIGLTLEQALQFWK[MT7].3y3_1.heavy 631.368 / 624.363 192289.0 48.0098991394043 44 14 10 10 10 1.8332545598906345 43.48312988947768 0.0 3 0.9365571792242606 4.873577453377688 192289.0 325.43144056441344 0.0 - - - - - - - 225.0 384 5 PRIM2 primase, DNA, polypeptide 2 (58kDa) 93 12 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9463.[MT7]-GIGLTLEQALQFWK[MT7].3b5_1.heavy 631.368 / 586.368 103995.0 48.0098991394043 44 14 10 10 10 1.8332545598906345 43.48312988947768 0.0 3 0.9365571792242606 4.873577453377688 103995.0 239.3287463950681 0.0 - - - - - - - 253.25 207 4 PRIM2 primase, DNA, polypeptide 2 (58kDa) 95 12 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9463.[MT7]-GIGLTLEQALQFWK[MT7].3b7_1.heavy 631.368 / 828.495 71243.0 48.0098991394043 44 14 10 10 10 1.8332545598906345 43.48312988947768 0.0 3 0.9365571792242606 4.873577453377688 71243.0 210.2251141567964 0.0 - - - - - - - 717.625 142 8 PRIM2 primase, DNA, polypeptide 2 (58kDa) 97 13 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9464.[MT7]-QDIITLQDPTNLDK[MT7].2b8_1.heavy 951.525 / 1071.58 3667.0 31.183700561523438 41 11 10 10 10 0.845471111132446 60.37196045826655 0.0 3 0.8724142723248004 3.4176837278382064 3667.0 7.508408408408407 1.0 - - - - - - - 333.0 7 5 PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2 99 13 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9464.[MT7]-QDIITLQDPTNLDK[MT7].2b3_1.heavy 951.525 / 501.279 4667.0 31.183700561523438 41 11 10 10 10 0.845471111132446 60.37196045826655 0.0 3 0.8724142723248004 3.4176837278382064 4667.0 16.737541994768378 0.0 - - - - - - - 333.0 9 2 PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2 101 13 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9464.[MT7]-QDIITLQDPTNLDK[MT7].2b4_1.heavy 951.525 / 614.363 6000.0 31.183700561523438 41 11 10 10 10 0.845471111132446 60.37196045826655 0.0 3 0.8724142723248004 3.4176837278382064 6000.0 23.233788511149832 0.0 - - - - - - - 333.0 12 2 PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2 103 13 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9464.[MT7]-QDIITLQDPTNLDK[MT7].2y6_1.heavy 951.525 / 831.469 10000.0 31.183700561523438 41 11 10 10 10 0.845471111132446 60.37196045826655 0.0 3 0.8724142723248004 3.4176837278382064 10000.0 44.12298355326841 0.0 - - - - - - - 333.0 20 3 PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2 105 14 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9468.[MT7]-ITELFAVALPQLLAK[MT7].3y6_1.heavy 639.067 / 813.531 147928.0 48.51210021972656 43 13 10 10 10 1.351928867122392 51.115685764721825 0.0 3 0.9070277614883097 4.015707578845121 147928.0 439.2517580423996 0.0 - - - - - - - 210.4 295 5 STAG2 stromal antigen 2 107 14 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9468.[MT7]-ITELFAVALPQLLAK[MT7].3b6_1.heavy 639.067 / 819.473 118773.0 48.51210021972656 43 13 10 10 10 1.351928867122392 51.115685764721825 0.0 3 0.9070277614883097 4.015707578845121 118773.0 297.2184460568473 0.0 - - - - - - - 1111.5714285714287 237 7 STAG2 stromal antigen 2 109 14 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9468.[MT7]-ITELFAVALPQLLAK[MT7].3b4_1.heavy 639.067 / 601.368 64673.0 48.51210021972656 43 13 10 10 10 1.351928867122392 51.115685764721825 0.0 3 0.9070277614883097 4.015707578845121 64673.0 197.6100397588719 0.0 - - - - - - - 715.125 129 8 STAG2 stromal antigen 2 111 14 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9468.[MT7]-ITELFAVALPQLLAK[MT7].3b5_1.heavy 639.067 / 748.436 74605.0 48.51210021972656 43 13 10 10 10 1.351928867122392 51.115685764721825 0.0 3 0.9070277614883097 4.015707578845121 74605.0 224.33242486514257 0.0 - - - - - - - 203.55555555555554 149 9 STAG2 stromal antigen 2 113 15 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9459.[MT7]-DNVDLLGSLADLYFR.3y6_1.heavy 618.995 / 784.399 38125.0 47.630699157714844 46 16 10 10 10 2.7798092173598263 35.97369178269608 0.0 3 0.9600117437895491 6.150893183888346 38125.0 272.1701388888889 0.0 - - - - - - - 180.0 76 14 ANAPC7 anaphase promoting complex subunit 7 115 15 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9459.[MT7]-DNVDLLGSLADLYFR.3b4_1.heavy 618.995 / 588.275 57427.0 47.630699157714844 46 16 10 10 10 2.7798092173598263 35.97369178269608 0.0 3 0.9600117437895491 6.150893183888346 57427.0 164.55508357324862 0.0 - - - - - - - 215.0 114 12 ANAPC7 anaphase promoting complex subunit 7 117 15 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9459.[MT7]-DNVDLLGSLADLYFR.3b5_1.heavy 618.995 / 701.359 47116.0 47.630699157714844 46 16 10 10 10 2.7798092173598263 35.97369178269608 0.0 3 0.9600117437895491 6.150893183888346 47116.0 324.9658078278612 0.0 - - - - - - - 244.0 94 15 ANAPC7 anaphase promoting complex subunit 7 119 15 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9459.[MT7]-DNVDLLGSLADLYFR.3y4_1.heavy 618.995 / 598.335 20021.0 47.630699157714844 46 16 10 10 10 2.7798092173598263 35.97369178269608 0.0 3 0.9600117437895491 6.150893183888346 20021.0 75.00136518243661 0.0 - - - - - - - 228.0 40 15 ANAPC7 anaphase promoting complex subunit 7 121 16 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A36.[MT7]-LWSVHGQK[MT7].3y3_1.heavy 414.911 / 476.295 166411.0 24.620800018310547 50 20 10 10 10 3.26702970004557 22.915990166656393 0.0 3 0.9942163669841481 16.220060384681315 166411.0 597.3992936800341 0.0 - - - - - - - 297.0 332 5 CDC45 cell division cycle 45 homolog (S. cerevisiae) 123 16 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A36.[MT7]-LWSVHGQK[MT7].3b4_1.heavy 414.911 / 630.373 19910.0 24.620800018310547 50 20 10 10 10 3.26702970004557 22.915990166656393 0.0 3 0.9942163669841481 16.220060384681315 19910.0 86.81296296296297 0.0 - - - - - - - 297.0 39 8 CDC45 cell division cycle 45 homolog (S. cerevisiae) 125 16 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A36.[MT7]-LWSVHGQK[MT7].3b3_1.heavy 414.911 / 531.305 54083.0 24.620800018310547 50 20 10 10 10 3.26702970004557 22.915990166656393 0.0 3 0.9942163669841481 16.220060384681315 54083.0 111.07956228956229 0.0 - - - - - - - 297.0 108 5 CDC45 cell division cycle 45 homolog (S. cerevisiae) 127 16 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A36.[MT7]-LWSVHGQK[MT7].3y4_1.heavy 414.911 / 613.354 34174.0 24.620800018310547 50 20 10 10 10 3.26702970004557 22.915990166656393 0.0 3 0.9942163669841481 16.220060384681315 34174.0 69.03838383838384 0.0 - - - - - - - 668.25 68 8 CDC45 cell division cycle 45 homolog (S. cerevisiae) 129 17 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 TPX_ECO57.AQTFTLVAK.2y7.peptide 489.78 / 779.47 726974.0 27.386499404907227 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 726974.0 399.2887497945996 0.0 - - - - - - - 1667.0 1453 2 131 17 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 TPX_ECO57.AQTFTLVAK.2y6.peptide 489.78 / 678.42 335667.0 27.386499404907227 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 335667.0 384.21515421878604 0.0 - - - - - - - 333.0 671 1 133 17 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 TPX_ECO57.AQTFTLVAK.2y5.peptide 489.78 / 531.35 274667.0 27.386499404907227 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 274667.0 276.7749095348837 0.0 - - - - - - - 333.0 549 1 135 18 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A39.[MT7]-YASSK[MT7].2y4_1.heavy 422.244 / 536.316 18812.0 15.184499740600586 50 20 10 10 10 12.075697890485088 8.281094882209159 0.0 3 0.9977614952456811 26.079683211893514 18812.0 57.398818897637796 1.0 - - - - - - - 698.75 37 8 CCNB2 cyclin B2 137 18 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A39.[MT7]-YASSK[MT7].2y3_1.heavy 422.244 / 465.279 9999.0 15.184499740600586 50 20 10 10 10 12.075697890485088 8.281094882209159 0.0 3 0.9977614952456811 26.079683211893514 9999.0 24.780462015860245 0.0 - - - - - - - 266.14285714285717 19 7 CCNB2 cyclin B2 139 18 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A39.[MT7]-YASSK[MT7].2y2_1.heavy 422.244 / 378.247 7965.0 15.184499740600586 50 20 10 10 10 12.075697890485088 8.281094882209159 0.0 3 0.9977614952456811 26.079683211893514 7965.0 10.32490196171522 1.0 - - - - - - - 660.7 15 10 CCNB2 cyclin B2 141 18 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A39.[MT7]-YASSK[MT7].2y1_1.heavy 422.244 / 291.215 N/A 15.184499740600586 50 20 10 10 10 12.075697890485088 8.281094882209159 0.0 3 0.9977614952456811 26.079683211893514 4576.0 1.8724257848774863 34.0 - - - - - - - 677.6666666666666 40 3 CCNB2 cyclin B2 143 19 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A38.[MT7]-TPDSK[MT7].2b3_1.heavy 418.242 / 458.237 8780.0 13.727299690246582 37 17 2 10 8 2.9435280376027055 28.11953396737185 0.0 4 0.9744896254131754 7.710390113486725 8780.0 9.874996023954589 0.0 - - - - - - - 728.6666666666666 17 9 SHC3;C13orf40 SHC (Src homology 2 domain containing) transforming protein 3;chromosome 13 open reading frame 40 145 19 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A38.[MT7]-TPDSK[MT7].2y4_1.heavy 418.242 / 590.327 45455.0 13.727299690246582 37 17 2 10 8 2.9435280376027055 28.11953396737185 0.0 4 0.9744896254131754 7.710390113486725 45455.0 39.031957831094346 1.0 - - - - - - - 333.3333333333333 262 6 SHC3;C13orf40 SHC (Src homology 2 domain containing) transforming protein 3;chromosome 13 open reading frame 40 147 19 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A38.[MT7]-TPDSK[MT7].2y3_1.heavy 418.242 / 493.274 4334.0 13.727299690246582 37 17 2 10 8 2.9435280376027055 28.11953396737185 0.0 4 0.9744896254131754 7.710390113486725 4334.0 13.635056179775281 0.0 - - - - - - - 293.7142857142857 8 14 SHC3;C13orf40 SHC (Src homology 2 domain containing) transforming protein 3;chromosome 13 open reading frame 40 149 19 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A38.[MT7]-TPDSK[MT7].2y2_1.heavy 418.242 / 378.247 30896.0 13.727299690246582 37 17 2 10 8 2.9435280376027055 28.11953396737185 0.0 4 0.9744896254131754 7.710390113486725 30896.0 36.932236503856046 0.0 - - - - - - - 333.3333333333333 61 6 SHC3;C13orf40 SHC (Src homology 2 domain containing) transforming protein 3;chromosome 13 open reading frame 40 151 20 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A35.[MT7]-FSPDGR.2y4_1.heavy 411.715 / 444.22 5522.0 19.657100677490234 36 8 10 10 8 0.5266801532734315 90.99812359063017 0.0 4 0.7518179950912969 2.4241310367224957 5522.0 7.890967131750659 1.0 - - - - - - - 360.0 21 10 POC1A;POC1B;DET1 POC1 centriolar protein homolog A (Chlamydomonas);POC1 centriolar protein homolog B (Chlamydomonas);de-etiolated homolog 1 (Arabidopsis) 153 20 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A35.[MT7]-FSPDGR.2y5_1.heavy 411.715 / 531.252 18485.0 19.657100677490234 36 8 10 10 8 0.5266801532734315 90.99812359063017 0.0 4 0.7518179950912969 2.4241310367224957 18485.0 20.779182124880673 1.0 - - - - - - - 411.42857142857144 36 7 POC1A;POC1B;DET1 POC1 centriolar protein homolog A (Chlamydomonas);POC1 centriolar protein homolog B (Chlamydomonas);de-etiolated homolog 1 (Arabidopsis) 155 20 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A35.[MT7]-FSPDGR.2b4_1.heavy 411.715 / 591.289 37931.0 19.657100677490234 36 8 10 10 8 0.5266801532734315 90.99812359063017 0.0 4 0.7518179950912969 2.4241310367224957 37931.0 107.6292125 0.0 - - - - - - - 342.85714285714283 75 7 POC1A;POC1B;DET1 POC1 centriolar protein homolog A (Chlamydomonas);POC1 centriolar protein homolog B (Chlamydomonas);de-etiolated homolog 1 (Arabidopsis) 157 20 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A35.[MT7]-FSPDGR.2b5_1.heavy 411.715 / 648.311 1921.0 19.657100677490234 36 8 10 10 8 0.5266801532734315 90.99812359063017 0.0 4 0.7518179950912969 2.4241310367224957 1921.0 0.7916603347522925 7.0 - - - - - - - 330.0 6 8 POC1A;POC1B;DET1 POC1 centriolar protein homolog A (Chlamydomonas);POC1 centriolar protein homolog B (Chlamydomonas);de-etiolated homolog 1 (Arabidopsis) 159 21 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A34.[MT7]-VWDTR.2y4_1.heavy 410.725 / 577.273 54772.0 23.539400100708008 45 15 10 10 10 3.1538710308698894 31.707066973001222 0.0 3 0.9527951698346321 5.65777627279718 54772.0 205.03489587540207 0.0 - - - - - - - 281.0 109 3 WDR17;FBXW8 WD repeat domain 17;F-box and WD repeat domain containing 8 161 21 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A34.[MT7]-VWDTR.2b3_1.heavy 410.725 / 545.284 382565.0 23.539400100708008 45 15 10 10 10 3.1538710308698894 31.707066973001222 0.0 3 0.9527951698346321 5.65777627279718 382565.0 620.9808833834738 0.0 - - - - - - - 281.0 765 1 WDR17;FBXW8 WD repeat domain 17;F-box and WD repeat domain containing 8 163 21 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A34.[MT7]-VWDTR.2y2_1.heavy 410.725 / 276.167 607593.0 23.539400100708008 45 15 10 10 10 3.1538710308698894 31.707066973001222 0.0 3 0.9527951698346321 5.65777627279718 607593.0 710.4496369774172 0.0 - - - - - - - 281.0 1215 3 WDR17;FBXW8 WD repeat domain 17;F-box and WD repeat domain containing 8 165 21 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A34.[MT7]-VWDTR.2b2_1.heavy 410.725 / 430.257 8988.0 23.539400100708008 45 15 10 10 10 3.1538710308698894 31.707066973001222 0.0 3 0.9527951698346321 5.65777627279718 8988.0 10.707680214253156 1.0 - - - - - - - 722.5714285714286 23 7 WDR17;FBXW8 WD repeat domain 17;F-box and WD repeat domain containing 8 167 22 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9596.[MT7]-LQNETLHLAVNYIDR.3y7_1.heavy 648.354 / 850.442 45566.0 34.14609909057617 48 18 10 10 10 4.892182266037477 20.44077562159127 0.0 3 0.9811701946360822 8.979571566647012 45566.0 53.53602473498233 0.0 - - - - - - - 283.0 91 3 CCNA2 cyclin A2 169 22 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9596.[MT7]-LQNETLHLAVNYIDR.3b4_1.heavy 648.354 / 629.338 15849.0 34.14609909057617 48 18 10 10 10 4.892182266037477 20.44077562159127 0.0 3 0.9811701946360822 8.979571566647012 15849.0 20.821313730439172 0.0 - - - - - - - 283.0 31 6 CCNA2 cyclin A2 171 22 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9596.[MT7]-LQNETLHLAVNYIDR.3b5_1.heavy 648.354 / 730.385 18396.0 34.14609909057617 48 18 10 10 10 4.892182266037477 20.44077562159127 0.0 3 0.9811701946360822 8.979571566647012 18396.0 29.251590106007065 0.0 - - - - - - - 283.0 36 7 CCNA2 cyclin A2 173 22 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9596.[MT7]-LQNETLHLAVNYIDR.3y8_1.heavy 648.354 / 963.526 22359.0 34.14609909057617 48 18 10 10 10 4.892182266037477 20.44077562159127 0.0 3 0.9811701946360822 8.979571566647012 22359.0 55.30494699646643 0.0 - - - - - - - 283.0 44 8 CCNA2 cyclin A2 175 23 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9450.[MT7]-SNLMDAISFVLGEK[MT7].3b6_1.heavy 604.665 / 776.373 45611.0 48.08570098876953 47 17 10 10 10 2.7034285884705005 32.73011762856318 0.0 3 0.9765572653662119 8.044631275207808 45611.0 189.1073353909465 0.0 - - - - - - - 732.8571428571429 91 7 SMC1A structural maintenance of chromosomes 1A 177 23 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9450.[MT7]-SNLMDAISFVLGEK[MT7].3b5_1.heavy 604.665 / 705.336 42966.0 48.08570098876953 47 17 10 10 10 2.7034285884705005 32.73011762856318 0.0 3 0.9765572653662119 8.044631275207808 42966.0 141.7675925925926 0.0 - - - - - - - 249.75 85 16 SMC1A structural maintenance of chromosomes 1A 179 23 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9450.[MT7]-SNLMDAISFVLGEK[MT7].3y5_1.heavy 604.665 / 689.431 17057.0 48.08570098876953 47 17 10 10 10 2.7034285884705005 32.73011762856318 0.0 3 0.9765572653662119 8.044631275207808 17057.0 98.3710582010582 0.0 - - - - - - - 206.1818181818182 34 22 SMC1A structural maintenance of chromosomes 1A 181 23 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9450.[MT7]-SNLMDAISFVLGEK[MT7].3b7_1.heavy 604.665 / 889.457 13548.0 48.08570098876953 47 17 10 10 10 2.7034285884705005 32.73011762856318 0.0 3 0.9765572653662119 8.044631275207808 13548.0 88.12472222222223 0.0 - - - - - - - 179.05263157894737 27 19 SMC1A structural maintenance of chromosomes 1A 183 24 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9594.[MT7]-EDALAFNSAISLPGPR.3y7_1.heavy 601.324 / 739.446 13049.0 35.50910186767578 47 17 10 10 10 3.9900791672167686 19.825913571387233 0.0 3 0.9721686741917561 7.38045256961682 13049.0 23.765964712578256 0.0 - - - - - - - 596.125 26 8 CCNA2 cyclin A2 185 24 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9594.[MT7]-EDALAFNSAISLPGPR.3y6_1.heavy 601.324 / 626.362 22585.0 35.50910186767578 47 17 10 10 10 3.9900791672167686 19.825913571387233 0.0 3 0.9721686741917561 7.38045256961682 22585.0 46.23229723526056 1.0 - - - - - - - 251.0 45 1 CCNA2 cyclin A2 187 24 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9594.[MT7]-EDALAFNSAISLPGPR.3b4_1.heavy 601.324 / 573.3 12296.0 35.50910186767578 47 17 10 10 10 3.9900791672167686 19.825913571387233 0.0 3 0.9721686741917561 7.38045256961682 12296.0 13.130358807099224 0.0 - - - - - - - 585.6666666666666 24 3 CCNA2 cyclin A2 189 24 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9594.[MT7]-EDALAFNSAISLPGPR.3b5_1.heavy 601.324 / 644.337 22083.0 35.50910186767578 47 17 10 10 10 3.9900791672167686 19.825913571387233 0.0 3 0.9721686741917561 7.38045256961682 22083.0 10.794209561796055 0.0 - - - - - - - 627.5 44 6 CCNA2 cyclin A2 191 25 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9305.[MT7]-SPAITATLEGK[MT7].3b6_1.heavy 459.273 / 685.4 11000.0 27.658100128173828 47 17 10 10 10 4.301015010314355 23.25032573943311 0.0 3 0.9755813508104297 7.88158980584173 11000.0 25.51257871064468 0.0 - - - - - - - 333.0 22 5 UBA3 ubiquitin-like modifier activating enzyme 3 193 25 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9305.[MT7]-SPAITATLEGK[MT7].3y3_1.heavy 459.273 / 477.279 98667.0 27.658100128173828 47 17 10 10 10 4.301015010314355 23.25032573943311 0.0 3 0.9755813508104297 7.88158980584173 98667.0 117.67797695423857 0.0 - - - - - - - 667.0 197 6 UBA3 ubiquitin-like modifier activating enzyme 3 195 25 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9305.[MT7]-SPAITATLEGK[MT7].3b4_1.heavy 459.273 / 513.315 42667.0 27.658100128173828 47 17 10 10 10 4.301015010314355 23.25032573943311 0.0 3 0.9755813508104297 7.88158980584173 42667.0 81.49397 0.0 - - - - - - - 333.0 85 6 UBA3 ubiquitin-like modifier activating enzyme 3 197 25 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9305.[MT7]-SPAITATLEGK[MT7].3y4_1.heavy 459.273 / 590.363 13000.0 27.658100128173828 47 17 10 10 10 4.301015010314355 23.25032573943311 0.0 3 0.9755813508104297 7.88158980584173 13000.0 -0.28499134469139964 2.0 - - - - - - - 333.0 41 5 UBA3 ubiquitin-like modifier activating enzyme 3 199 26 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A219.[MT7]-LEGLTQDLR.2y8_1.heavy 594.839 / 931.484 18667.0 31.235200881958008 46 16 10 10 10 2.2573122624125332 35.489276556974474 0.0 3 0.9647502206974832 6.553904536294057 18667.0 73.17464 0.0 - - - - - - - 333.0 37 5 E2F1 E2F transcription factor 1 201 26 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A219.[MT7]-LEGLTQDLR.2b4_1.heavy 594.839 / 557.341 8333.0 31.235200881958008 46 16 10 10 10 2.2573122624125332 35.489276556974474 0.0 3 0.9647502206974832 6.553904536294057 8333.0 11.58287 1.0 - - - - - - - 333.0 27 2 E2F1 E2F transcription factor 1 203 26 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A219.[MT7]-LEGLTQDLR.2b7_1.heavy 594.839 / 901.475 19667.0 31.235200881958008 46 16 10 10 10 2.2573122624125332 35.489276556974474 0.0 3 0.9647502206974832 6.553904536294057 19667.0 70.82779916348132 0.0 - - - - - - - 333.0 39 7 E2F1 E2F transcription factor 1 205 26 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A219.[MT7]-LEGLTQDLR.2y7_1.heavy 594.839 / 802.442 10333.0 31.235200881958008 46 16 10 10 10 2.2573122624125332 35.489276556974474 0.0 3 0.9647502206974832 6.553904536294057 10333.0 10.22336034923548 0.0 - - - - - - - 333.0 20 4 E2F1 E2F transcription factor 1 207 27 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9309.[MT7]-ILAEDNLLWR.2y8_1.heavy 693.897 / 1016.52 56085.0 38.739200592041016 47 17 10 10 10 2.1607092226497846 36.38405288783066 0.0 3 0.9783359227712032 8.369607469856518 56085.0 193.44140672268907 0.0 - - - - - - - 285.8 112 5 FBXW7 F-box and WD repeat domain containing 7 209 27 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9309.[MT7]-ILAEDNLLWR.2y5_1.heavy 693.897 / 701.409 43582.0 38.739200592041016 47 17 10 10 10 2.1607092226497846 36.38405288783066 0.0 3 0.9783359227712032 8.369607469856518 43582.0 80.67150210078387 0.0 - - - - - - - 255.28571428571428 87 7 FBXW7 F-box and WD repeat domain containing 7 211 27 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9309.[MT7]-ILAEDNLLWR.2y9_1.heavy 693.897 / 1129.6 89485.0 38.739200592041016 47 17 10 10 10 2.1607092226497846 36.38405288783066 0.0 3 0.9783359227712032 8.369607469856518 89485.0 298.24298945610434 0.0 - - - - - - - 245.75 178 8 FBXW7 F-box and WD repeat domain containing 7 213 27 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9309.[MT7]-ILAEDNLLWR.2y6_1.heavy 693.897 / 816.436 21255.0 38.739200592041016 47 17 10 10 10 2.1607092226497846 36.38405288783066 0.0 3 0.9783359227712032 8.369607469856518 21255.0 91.2021579079393 0.0 - - - - - - - 276.09090909090907 42 11 FBXW7 F-box and WD repeat domain containing 7 215 28 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A214.[MT7]-DLASPLIGRS.2y8_1.heavy 586.841 / 800.463 15667.0 29.116300582885742 50 20 10 10 10 6.3052696818988805 15.859749867175266 0.0 3 0.99375178121486 15.60478773729467 15667.0 52.68365346750469 0.0 - - - - - - - 333.0 31 2 CCNB2 cyclin B2 217 28 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A214.[MT7]-DLASPLIGRS.2y9_1.heavy 586.841 / 913.547 19333.0 29.116300582885742 50 20 10 10 10 6.3052696818988805 15.859749867175266 0.0 3 0.99375178121486 15.60478773729467 19333.0 33.92267854069964 0.0 - - - - - - - 667.0 38 7 CCNB2 cyclin B2 219 28 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A214.[MT7]-DLASPLIGRS.2y6_1.heavy 586.841 / 642.393 27667.0 29.116300582885742 50 20 10 10 10 6.3052696818988805 15.859749867175266 0.0 3 0.99375178121486 15.60478773729467 27667.0 40.255485 0.0 - - - - - - - 1133.2 55 10 CCNB2 cyclin B2 221 28 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A214.[MT7]-DLASPLIGRS.2y7_1.heavy 586.841 / 729.425 21667.0 29.116300582885742 50 20 10 10 10 6.3052696818988805 15.859749867175266 0.0 3 0.99375178121486 15.60478773729467 21667.0 45.164084619355734 0.0 - - - - - - - 333.0 43 2 CCNB2 cyclin B2 223 29 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9458.[MT7]-FRHENIIGINDIIR.3y7_1.heavy 618.687 / 800.463 74043.0 32.16740036010742 46 16 10 10 10 37.081440586659994 2.6967668574336585 0.0 3 0.9607857759520303 6.211707996228133 74043.0 77.87719110927019 0.0 - - - - - - - 323.0 148 3 MAPK1 mitogen-activated protein kinase 1 225 29 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9458.[MT7]-FRHENIIGINDIIR.3b5_1.heavy 618.687 / 828.423 16167.0 32.16740036010742 46 16 10 10 10 37.081440586659994 2.6967668574336585 0.0 3 0.9607857759520303 6.211707996228133 16167.0 37.98919130323937 0.0 - - - - - - - 323.0 32 5 MAPK1 mitogen-activated protein kinase 1 227 29 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9458.[MT7]-FRHENIIGINDIIR.3y8_1.heavy 618.687 / 913.547 43003.0 32.16740036010742 46 16 10 10 10 37.081440586659994 2.6967668574336585 0.0 3 0.9607857759520303 6.211707996228133 43003.0 73.15766185088621 0.0 - - - - - - - 323.0 86 5 MAPK1 mitogen-activated protein kinase 1 229 29 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9458.[MT7]-FRHENIIGINDIIR.3y5_1.heavy 618.687 / 630.357 22310.0 32.16740036010742 46 16 10 10 10 37.081440586659994 2.6967668574336585 0.0 3 0.9607857759520303 6.211707996228133 22310.0 75.50622291021672 0.0 - - - - - - - 323.0 44 5 MAPK1 mitogen-activated protein kinase 1 231 30 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9455.[MT7]-GNNQWVPYISLQER.2y8_1.heavy 924.48 / 1005.54 43888.0 35.467098236083984 50 20 10 10 10 6.277612362192049 15.929623275604975 0.0 3 0.9943070873844102 16.348912226695738 43888.0 49.929421088778135 0.0 - - - - - - - 326.6666666666667 87 3 GADD45B growth arrest and DNA-damage-inducible, beta 233 30 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9455.[MT7]-GNNQWVPYISLQER.2y9_1.heavy 924.48 / 1104.6 13485.0 35.467098236083984 50 20 10 10 10 6.277612362192049 15.929623275604975 0.0 3 0.9943070873844102 16.348912226695738 13485.0 49.880739795918366 0.0 - - - - - - - 285.8333333333333 26 6 GADD45B growth arrest and DNA-damage-inducible, beta 235 30 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9455.[MT7]-GNNQWVPYISLQER.2b4_1.heavy 924.48 / 558.275 18389.0 35.467098236083984 50 20 10 10 10 6.277612362192049 15.929623275604975 0.0 3 0.9943070873844102 16.348912226695738 18389.0 29.98715901032664 0.0 - - - - - - - 353.8888888888889 36 9 GADD45B growth arrest and DNA-damage-inducible, beta 237 30 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9455.[MT7]-GNNQWVPYISLQER.2b5_1.heavy 924.48 / 744.354 16182.0 35.467098236083984 50 20 10 10 10 6.277612362192049 15.929623275604975 0.0 3 0.9943070873844102 16.348912226695738 16182.0 12.997725945088876 1.0 - - - - - - - 367.5 33 6 GADD45B growth arrest and DNA-damage-inducible, beta 239 31 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A217.[MT7]-EFLEVEK[MT7].2y4_1.heavy 591.336 / 648.369 15667.0 28.912599563598633 46 18 10 10 8 9.848402141239843 10.153931426221261 0.0 4 0.9810364012389297 8.947738365460115 15667.0 14.93869409852463 0.0 - - - - - - - 333.0 31 3 WEE2 WEE1 homolog 2 (S. pombe) 241 31 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A217.[MT7]-EFLEVEK[MT7].2y5_1.heavy 591.336 / 761.453 10667.0 28.912599563598633 46 18 10 10 8 9.848402141239843 10.153931426221261 0.0 4 0.9810364012389297 8.947738365460115 10667.0 12.535605528882218 0.0 - - - - - - - 333.0 21 3 WEE2 WEE1 homolog 2 (S. pombe) 243 31 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A217.[MT7]-EFLEVEK[MT7].2y3_1.heavy 591.336 / 519.326 14667.0 28.912599563598633 46 18 10 10 8 9.848402141239843 10.153931426221261 0.0 4 0.9810364012389297 8.947738365460115 14667.0 16.928255783405774 1.0 - - - - - - - 333.0 31 3 WEE2 WEE1 homolog 2 (S. pombe) 245 31 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A217.[MT7]-EFLEVEK[MT7].2y6_1.heavy 591.336 / 908.521 15333.0 28.912599563598633 46 18 10 10 8 9.848402141239843 10.153931426221261 0.0 4 0.9810364012389297 8.947738365460115 15333.0 26.270128773946002 0.0 - - - - - - - 333.0 30 5 WEE2 WEE1 homolog 2 (S. pombe) 247 32 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9454.[MT7]-VLSLDTNITNQVNK[MT7].3b6_1.heavy 616.354 / 773.453 8667.0 31.337200164794922 48 18 10 10 10 7.424094575203978 13.469655994684373 0.0 3 0.9879827655020179 11.246676991605225 8667.0 4.388310255802937 1.0 - - - - - - - 333.0 17 4 POLE polymerase (DNA directed), epsilon 249 32 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9454.[MT7]-VLSLDTNITNQVNK[MT7].3y6_1.heavy 616.354 / 847.475 17333.0 31.337200164794922 48 18 10 10 10 7.424094575203978 13.469655994684373 0.0 3 0.9879827655020179 11.246676991605225 17333.0 50.28389055472264 0.0 - - - - - - - 333.0 34 4 POLE polymerase (DNA directed), epsilon 251 32 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9454.[MT7]-VLSLDTNITNQVNK[MT7].3y3_1.heavy 616.354 / 504.326 29667.0 31.337200164794922 48 18 10 10 10 7.424094575203978 13.469655994684373 0.0 3 0.9879827655020179 11.246676991605225 29667.0 23.04137 0.0 - - - - - - - 333.0 59 4 POLE polymerase (DNA directed), epsilon 253 32 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9454.[MT7]-VLSLDTNITNQVNK[MT7].3b7_1.heavy 616.354 / 887.495 18000.0 31.337200164794922 48 18 10 10 10 7.424094575203978 13.469655994684373 0.0 3 0.9879827655020179 11.246676991605225 18000.0 77.25920823372098 0.0 - - - - - - - 333.0 36 5 POLE polymerase (DNA directed), epsilon 255 33 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A212.[MT7]-SQVGTLLFR.2y8_1.heavy 582.846 / 933.552 72917.0 33.710601806640625 48 18 10 10 10 4.9736657242518 20.10589483575381 0.0 3 0.9803996897023967 8.800735618027046 72917.0 118.12893939393939 0.0 - - - - - - - 286.0 145 6 CDC25B cell division cycle 25 homolog B (S. pombe) 257 33 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A212.[MT7]-SQVGTLLFR.2y6_1.heavy 582.846 / 706.425 140116.0 33.710601806640625 48 18 10 10 10 4.9736657242518 20.10589483575381 0.0 3 0.9803996897023967 8.800735618027046 140116.0 357.6387412587412 0.0 - - - - - - - 286.0 280 1 CDC25B cell division cycle 25 homolog B (S. pombe) 259 33 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A212.[MT7]-SQVGTLLFR.2b5_1.heavy 582.846 / 617.338 22304.0 33.710601806640625 48 18 10 10 10 4.9736657242518 20.10589483575381 0.0 3 0.9803996897023967 8.800735618027046 22304.0 42.87671048951049 0.0 - - - - - - - 286.0 44 2 CDC25B cell division cycle 25 homolog B (S. pombe) 261 33 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A212.[MT7]-SQVGTLLFR.2y7_1.heavy 582.846 / 805.493 72631.0 33.710601806640625 48 18 10 10 10 4.9736657242518 20.10589483575381 0.0 3 0.9803996897023967 8.800735618027046 72631.0 167.10209090909092 0.0 - - - - - - - 286.0 145 3 CDC25B cell division cycle 25 homolog B (S. pombe) 263 34 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9451.[MT7]-LSQQLC[CAM]DVTLQVK[MT7].2y5_1.heavy 910.513 / 732.474 2835.0 32.35900115966797 46 16 10 10 10 2.1553556094710187 41.38196873006097 0.0 3 0.9642390454613102 6.50661359910403 2835.0 8.415 0.0 - - - - - - - 315.0 5 7 KEAP1 kelch-like ECH-associated protein 1 265 34 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9451.[MT7]-LSQQLC[CAM]DVTLQVK[MT7].2b4_1.heavy 910.513 / 601.343 3465.0 32.35900115966797 46 16 10 10 10 2.1553556094710187 41.38196873006097 0.0 3 0.9642390454613102 6.50661359910403 3465.0 7.553333333333333 1.0 - - - - - - - 315.0 9 4 KEAP1 kelch-like ECH-associated protein 1 267 34 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9451.[MT7]-LSQQLC[CAM]DVTLQVK[MT7].2y6_1.heavy 910.513 / 831.542 3465.0 32.35900115966797 46 16 10 10 10 2.1553556094710187 41.38196873006097 0.0 3 0.9642390454613102 6.50661359910403 3465.0 5.829999999999999 0.0 - - - - - - - 315.0 6 1 KEAP1 kelch-like ECH-associated protein 1 269 34 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9451.[MT7]-LSQQLC[CAM]DVTLQVK[MT7].2b7_1.heavy 910.513 / 989.484 3780.0 32.35900115966797 46 16 10 10 10 2.1553556094710187 41.38196873006097 0.0 3 0.9642390454613102 6.50661359910403 3780.0 9.6 0.0 - - - - - - - 315.0 7 1 KEAP1 kelch-like ECH-associated protein 1 271 35 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A213.[MT7]-YVNPETVAALLSGK[MT7].3b6_1.heavy 584.004 / 848.427 27330.0 41.49495029449463 34 8 10 6 10 0.8379029637407792 77.4022302628441 0.036998748779296875 3 0.7676085300436919 2.508756813497671 27330.0 95.00428571428571 0.0 - - - - - - - 270.0 54 7 CDC25C cell division cycle 25 homolog C (S. pombe) 273 35 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A213.[MT7]-YVNPETVAALLSGK[MT7].3b5_1.heavy 584.004 / 747.379 20025.0 41.49495029449463 34 8 10 6 10 0.8379029637407792 77.4022302628441 0.036998748779296875 3 0.7676085300436919 2.508756813497671 20025.0 46.208730046187505 0.0 - - - - - - - 582.75 40 8 CDC25C cell division cycle 25 homolog C (S. pombe) 275 35 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A213.[MT7]-YVNPETVAALLSGK[MT7].3y4_1.heavy 584.004 / 548.352 98489.0 41.49495029449463 34 8 10 6 10 0.8379029637407792 77.4022302628441 0.036998748779296875 3 0.7676085300436919 2.508756813497671 98489.0 161.5850513955858 0.0 - - - - - - - 302.4 196 5 CDC25C cell division cycle 25 homolog C (S. pombe) 277 35 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A213.[MT7]-YVNPETVAALLSGK[MT7].3b3_1.heavy 584.004 / 521.284 53904.0 41.49495029449463 34 8 10 6 10 0.8379029637407792 77.4022302628441 0.036998748779296875 3 0.7676085300436919 2.508756813497671 53904.0 113.75081525438519 0.0 - - - - - - - 352.8 107 5 CDC25C cell division cycle 25 homolog C (S. pombe) 279 36 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9449.[MT7]-YISPETMVALLTGK[MT7].3b6_1.heavy 604.346 / 835.432 35329.0 47.081299781799316 33 10 10 3 10 1.7726462263422123 44.52829468945562 0.06840133666992188 3 0.8480411330170252 3.1249264803765335 35329.0 102.69588362068966 0.0 - - - - - - - 265.09090909090907 70 11 CDC25B cell division cycle 25 homolog B (S. pombe) 281 36 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9449.[MT7]-YISPETMVALLTGK[MT7].3y4_1.heavy 604.346 / 562.368 52563.0 47.081299781799316 33 10 10 3 10 1.7726462263422123 44.52829468945562 0.06840133666992188 3 0.8480411330170252 3.1249264803765335 52563.0 95.66443201040988 0.0 - - - - - - - 265.25 105 8 CDC25B cell division cycle 25 homolog B (S. pombe) 283 36 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9449.[MT7]-YISPETMVALLTGK[MT7].3b3_1.heavy 604.346 / 508.289 15179.0 47.081299781799316 33 10 10 3 10 1.7726462263422123 44.52829468945562 0.06840133666992188 3 0.8480411330170252 3.1249264803765335 15179.0 54.41528301886792 1.0 - - - - - - - 229.73333333333332 36 15 CDC25B cell division cycle 25 homolog B (S. pombe) 285 36 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9449.[MT7]-YISPETMVALLTGK[MT7].3b7_1.heavy 604.346 / 966.472 22205.0 47.081299781799316 33 10 10 3 10 1.7726462263422123 44.52829468945562 0.06840133666992188 3 0.8480411330170252 3.1249264803765335 22205.0 218.84094249442703 0.0 - - - - - - - 203.5 44 14 CDC25B cell division cycle 25 homolog B (S. pombe) 287 37 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9314.[MT7]-TIDGILLLIER.2y8_1.heavy 700.436 / 926.603 112666.0 46.09189987182617 50 20 10 10 10 17.45586427472476 5.728733818399076 0.0 3 0.994434014188042 16.53444708736144 112666.0 263.71847436361753 0.0 - - - - - - - 268.5 225 6 CUL4B;CUL4A cullin 4B;cullin 4A 289 37 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9314.[MT7]-TIDGILLLIER.2y9_1.heavy 700.436 / 1041.63 56736.0 46.09189987182617 50 20 10 10 10 17.45586427472476 5.728733818399076 0.0 3 0.994434014188042 16.53444708736144 56736.0 287.7124469273743 0.0 - - - - - - - 270.8 113 10 CUL4B;CUL4A cullin 4B;cullin 4A 291 37 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9314.[MT7]-TIDGILLLIER.2y10_1.heavy 700.436 / 1154.71 45169.0 46.09189987182617 50 20 10 10 10 17.45586427472476 5.728733818399076 0.0 3 0.994434014188042 16.53444708736144 45169.0 79.03840624322567 0.0 - - - - - - - 585.5714285714286 90 7 CUL4B;CUL4A cullin 4B;cullin 4A 293 37 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9314.[MT7]-TIDGILLLIER.2b5_1.heavy 700.436 / 644.374 47072.0 46.09189987182617 50 20 10 10 10 17.45586427472476 5.728733818399076 0.0 3 0.994434014188042 16.53444708736144 47072.0 122.36873398804441 0.0 - - - - - - - 695.375 94 8 CUL4B;CUL4A cullin 4B;cullin 4A 295 38 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9312.[MT7]-RLEAFLTQK[MT7].2b8_1.heavy 697.424 / 1103.63 5333.0 29.365999221801758 47 17 10 10 10 2.2237806192025227 31.282768386650794 0.0 3 0.9706113142083208 7.18129714871193 5333.0 30.10822822822823 0.0 - - - - - - - 333.0 10 2 MAP2K1;MAP2K2 mitogen-activated protein kinase kinase 1;mitogen-activated protein kinase kinase 2 297 38 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9312.[MT7]-RLEAFLTQK[MT7].2y4_1.heavy 697.424 / 633.405 4333.0 29.365999221801758 47 17 10 10 10 2.2237806192025227 31.282768386650794 0.0 3 0.9706113142083208 7.18129714871193 4333.0 2.210246058364276 2.0 - - - - - - - 333.0 8 3 MAP2K1;MAP2K2 mitogen-activated protein kinase kinase 1;mitogen-activated protein kinase kinase 2 299 38 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9312.[MT7]-RLEAFLTQK[MT7].2b3_1.heavy 697.424 / 543.337 6000.0 29.365999221801758 47 17 10 10 10 2.2237806192025227 31.282768386650794 0.0 3 0.9706113142083208 7.18129714871193 6000.0 11.065952023988007 0.0 - - - - - - - 333.0 12 7 MAP2K1;MAP2K2 mitogen-activated protein kinase kinase 1;mitogen-activated protein kinase kinase 2 301 38 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9312.[MT7]-RLEAFLTQK[MT7].2y3_1.heavy 697.424 / 520.321 7667.0 29.365999221801758 47 17 10 10 10 2.2237806192025227 31.282768386650794 0.0 3 0.9706113142083208 7.18129714871193 7667.0 14.408557466266867 0.0 - - - - - - - 333.0 15 3 MAP2K1;MAP2K2 mitogen-activated protein kinase kinase 1;mitogen-activated protein kinase kinase 2 303 39 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9588.[MT7]-APQHAQQSIR.3y6_1.heavy 427.238 / 702.389 27568.0 15.141599655151367 42 18 6 10 8 4.29325032326963 18.446996551232633 0.0 4 0.989442362534128 12.000412148823148 27568.0 145.22461787593897 0.0 - - - - - - - 646.0 55 8 CCNA2 cyclin A2 305 39 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9588.[MT7]-APQHAQQSIR.3y4_1.heavy 427.238 / 503.294 21020.0 15.141599655151367 42 18 6 10 8 4.29325032326963 18.446996551232633 0.0 4 0.989442362534128 12.000412148823148 21020.0 37.281305473597726 0.0 - - - - - - - 689.0 42 9 CCNA2 cyclin A2 307 39 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9588.[MT7]-APQHAQQSIR.3b3_1.heavy 427.238 / 441.258 50139.0 15.141599655151367 42 18 6 10 8 4.29325032326963 18.446996551232633 0.0 4 0.989442362534128 12.000412148823148 50139.0 118.95754440461184 0.0 - - - - - - - 236.875 100 8 CCNA2 cyclin A2 309 39 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9588.[MT7]-APQHAQQSIR.3y5_1.heavy 427.238 / 631.352 34976.0 15.141599655151367 42 18 6 10 8 4.29325032326963 18.446996551232633 0.0 4 0.989442362534128 12.000412148823148 34976.0 223.95904817597048 1.0 - - - - - - - 241.2 153 5 CCNA2 cyclin A2 311 40 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A207.[MT7]-EAFTLVGK[MT7].2y4_1.heavy 576.847 / 560.389 34000.0 29.859899520874023 45 15 10 10 10 1.9457895865269943 42.09256350135293 0.0 3 0.9517536160082665 5.595877995619172 34000.0 67.69977938445294 0.0 - - - - - - - 333.0 68 5 UBOX5 U-box domain containing 5 313 40 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A207.[MT7]-EAFTLVGK[MT7].2y5_1.heavy 576.847 / 661.437 62000.0 29.859899520874023 45 15 10 10 10 1.9457895865269943 42.09256350135293 0.0 3 0.9517536160082665 5.595877995619172 62000.0 203.64435221063894 0.0 - - - - - - - 333.0 124 5 UBOX5 U-box domain containing 5 315 40 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A207.[MT7]-EAFTLVGK[MT7].2y6_1.heavy 576.847 / 808.505 28000.0 29.859899520874023 45 15 10 10 10 1.9457895865269943 42.09256350135293 0.0 3 0.9517536160082665 5.595877995619172 28000.0 37.18971281611659 0.0 - - - - - - - 333.0 56 2 UBOX5 U-box domain containing 5 317 40 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A207.[MT7]-EAFTLVGK[MT7].2y7_1.heavy 576.847 / 879.542 34667.0 29.859899520874023 45 15 10 10 10 1.9457895865269943 42.09256350135293 0.0 3 0.9517536160082665 5.595877995619172 34667.0 97.71208395802098 0.0 - - - - - - - 333.0 69 2 UBOX5 U-box domain containing 5 319 41 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A205.[MT7]-MLNLLLER.2b3_1.heavy 573.345 / 503.277 15991.0 39.692049980163574 40 14 10 6 10 19.414090495066276 5.1508980050037945 0.039402008056640625 3 0.9452701809735148 5.251089807464783 15991.0 13.633459595959593 2.0 - - - - - - - 728.2 31 10 CDC25C cell division cycle 25 homolog C (S. pombe) 321 41 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A205.[MT7]-MLNLLLER.2b4_1.heavy 573.345 / 616.361 21058.0 39.692049980163574 40 14 10 6 10 19.414090495066276 5.1508980050037945 0.039402008056640625 3 0.9452701809735148 5.251089807464783 21058.0 91.71927489646717 0.0 - - - - - - - 369.5 42 12 CDC25C cell division cycle 25 homolog C (S. pombe) 323 41 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A205.[MT7]-MLNLLLER.2y6_1.heavy 573.345 / 757.457 25966.0 39.692049980163574 40 14 10 6 10 19.414090495066276 5.1508980050037945 0.039402008056640625 3 0.9452701809735148 5.251089807464783 25966.0 98.58716387182466 0.0 - - - - - - - 351.77777777777777 51 9 CDC25C cell division cycle 25 homolog C (S. pombe) 325 41 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A205.[MT7]-MLNLLLER.2y7_1.heavy 573.345 / 870.541 47658.0 39.692049980163574 40 14 10 6 10 19.414090495066276 5.1508980050037945 0.039402008056640625 3 0.9452701809735148 5.251089807464783 47658.0 206.83126915544128 0.0 - - - - - - - 290.3333333333333 95 6 CDC25C cell division cycle 25 homolog C (S. pombe) 327 42 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A206.[MT7]-SEFLSTAPR.2b3_1.heavy 576.313 / 508.252 14636.0 25.891250610351562 45 20 10 5 10 6.948647344681802 14.391290137430236 0.0457000732421875 3 0.9906288727560054 12.738747099631718 14636.0 55.336845563641575 0.0 - - - - - - - 318.0 29 4 ORC2 origin recognition complex, subunit 2 329 42 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A206.[MT7]-SEFLSTAPR.2y5_1.heavy 576.313 / 531.289 14954.0 25.891250610351562 45 20 10 5 10 6.948647344681802 14.391290137430236 0.0457000732421875 3 0.9906288727560054 12.738747099631718 14954.0 19.031556827658328 0.0 - - - - - - - 772.7142857142857 29 7 ORC2 origin recognition complex, subunit 2 331 42 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A206.[MT7]-SEFLSTAPR.2y6_1.heavy 576.313 / 644.373 12727.0 25.891250610351562 45 20 10 5 10 6.948647344681802 14.391290137430236 0.0457000732421875 3 0.9906288727560054 12.738747099631718 12727.0 25.849504256275722 0.0 - - - - - - - 318.0 25 2 ORC2 origin recognition complex, subunit 2 333 42 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A206.[MT7]-SEFLSTAPR.2y7_1.heavy 576.313 / 791.441 16863.0 25.891250610351562 45 20 10 5 10 6.948647344681802 14.391290137430236 0.0457000732421875 3 0.9906288727560054 12.738747099631718 16863.0 15.89904672662722 0.0 - - - - - - - 777.7777777777778 33 9 ORC2 origin recognition complex, subunit 2 335 43 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9446.[MT7]-ELALYVLSFLEPK[MT7].2b7_1.heavy 905.534 / 946.573 1003.0 51.89659881591797 41 11 10 10 10 1.937129709126653 51.622769259516744 0.0 3 0.8749214294032668 3.4525234407782195 1003.0 15.237123584065165 0.0 - - - - - - - 107.0 2 18 FBXW7 F-box and WD repeat domain containing 7 337 43 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9446.[MT7]-ELALYVLSFLEPK[MT7].2b5_1.heavy 905.534 / 734.42 1666.0 51.89659881591797 41 11 10 10 10 1.937129709126653 51.622769259516744 0.0 3 0.8749214294032668 3.4525234407782195 1666.0 26.138705372038704 0.0 - - - - - - - 111.57894736842105 3 19 FBXW7 F-box and WD repeat domain containing 7 339 43 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9446.[MT7]-ELALYVLSFLEPK[MT7].2b4_1.heavy 905.534 / 571.357 2071.0 51.89659881591797 41 11 10 10 10 1.937129709126653 51.622769259516744 0.0 3 0.8749214294032668 3.4525234407782195 2071.0 23.501500965668328 0.0 - - - - - - - 135.21052631578948 4 19 FBXW7 F-box and WD repeat domain containing 7 341 43 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9446.[MT7]-ELALYVLSFLEPK[MT7].2y9_1.heavy 905.534 / 1239.71 825.0 51.89659881591797 41 11 10 10 10 1.937129709126653 51.622769259516744 0.0 3 0.8749214294032668 3.4525234407782195 825.0 25.65234375 0.0 - - - - - - - 0.0 1 0 FBXW7 F-box and WD repeat domain containing 7 343 44 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9447.[MT7]-ELALYVLSFLEPK[MT7].3b6_1.heavy 604.025 / 833.489 14817.0 51.88704872131348 43 17 10 6 10 3.716062174492988 26.910206370172965 0.03820037841796875 3 0.9732280522219989 7.525730900394647 14817.0 502.0652822580645 0.0 - - - - - - - 254.66666666666666 29 12 FBXW7 F-box and WD repeat domain containing 7 345 44 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9447.[MT7]-ELALYVLSFLEPK[MT7].3b4_1.heavy 604.025 / 571.357 23844.0 51.88704872131348 43 17 10 6 10 3.716062174492988 26.910206370172965 0.03820037841796875 3 0.9732280522219989 7.525730900394647 23844.0 567.731007784557 0.0 - - - - - - - 226.44444444444446 47 9 FBXW7 F-box and WD repeat domain containing 7 347 44 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9447.[MT7]-ELALYVLSFLEPK[MT7].3b5_1.heavy 604.025 / 734.42 26674.0 51.88704872131348 43 17 10 6 10 3.716062174492988 26.910206370172965 0.03820037841796875 3 0.9732280522219989 7.525730900394647 26674.0 372.9489090871617 0.0 - - - - - - - 281.2 53 5 FBXW7 F-box and WD repeat domain containing 7 349 44 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9447.[MT7]-ELALYVLSFLEPK[MT7].3y4_1.heavy 604.025 / 630.394 9075.0 51.88704872131348 43 17 10 6 10 3.716062174492988 26.910206370172965 0.03820037841796875 3 0.9732280522219989 7.525730900394647 9075.0 148.45484917907598 0.0 - - - - - - - 145.5 18 12 FBXW7 F-box and WD repeat domain containing 7 351 45 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A201.[MT7]-LLGHSPVLR.3y3_1.heavy 379.24 / 387.271 48485.0 26.455799102783203 48 18 10 10 10 4.59946838371476 21.74164308946396 0.0 3 0.9832776015159833 9.530287844132495 48485.0 121.53979812326449 0.0 - - - - - - - 862.0 96 9 CDC25B cell division cycle 25 homolog B (S. pombe) 353 45 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A201.[MT7]-LLGHSPVLR.3b3_1.heavy 379.24 / 428.299 100526.0 26.455799102783203 48 18 10 10 10 4.59946838371476 21.74164308946396 0.0 3 0.9832776015159833 9.530287844132495 100526.0 190.3406249111843 0.0 - - - - - - - 323.0 201 2 CDC25B cell division cycle 25 homolog B (S. pombe) 355 45 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A201.[MT7]-LLGHSPVLR.3y4_1.heavy 379.24 / 484.324 147718.0 26.455799102783203 48 18 10 10 10 4.59946838371476 21.74164308946396 0.0 3 0.9832776015159833 9.530287844132495 147718.0 228.47361730837272 1.0 - - - - - - - 323.0 307 4 CDC25B cell division cycle 25 homolog B (S. pombe) 357 45 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A201.[MT7]-LLGHSPVLR.3y5_1.heavy 379.24 / 571.356 64970.0 26.455799102783203 48 18 10 10 10 4.59946838371476 21.74164308946396 0.0 3 0.9832776015159833 9.530287844132495 64970.0 160.51204398199866 0.0 - - - - - - - 323.0 129 4 CDC25B cell division cycle 25 homolog B (S. pombe) 359 46 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9440.[MT7]-VLVIGAGGLGC[CAM]ELLK[MT7].2b4_1.heavy 894.039 / 569.414 26748.0 38.78260040283203 39 9 10 10 10 0.6297743078430658 81.28779423503192 0.0 3 0.8089936511172277 2.777602219588537 26748.0 56.810297725309525 0.0 - - - - - - - 207.4 53 5 UBA3 ubiquitin-like modifier activating enzyme 3 361 46 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9440.[MT7]-VLVIGAGGLGC[CAM]ELLK[MT7].2y9_1.heavy 894.039 / 1090.6 9146.0 38.78260040283203 39 9 10 10 10 0.6297743078430658 81.28779423503192 0.0 3 0.8089936511172277 2.777602219588537 9146.0 31.34359126446914 0.0 - - - - - - - 276.2 18 10 UBA3 ubiquitin-like modifier activating enzyme 3 363 46 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9440.[MT7]-VLVIGAGGLGC[CAM]ELLK[MT7].2b5_1.heavy 894.039 / 626.436 8283.0 38.78260040283203 39 9 10 10 10 0.6297743078430658 81.28779423503192 0.0 3 0.8089936511172277 2.777602219588537 8283.0 5.307664608870718 2.0 - - - - - - - 567.1428571428571 19 7 UBA3 ubiquitin-like modifier activating enzyme 3 365 46 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9440.[MT7]-VLVIGAGGLGC[CAM]ELLK[MT7].2y11_1.heavy 894.039 / 1218.66 28818.0 38.78260040283203 39 9 10 10 10 0.6297743078430658 81.28779423503192 0.0 3 0.8089936511172277 2.777602219588537 28818.0 63.591331918484244 0.0 - - - - - - - 230.33333333333334 57 6 UBA3 ubiquitin-like modifier activating enzyme 3 367 47 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9442.[MT7]-VGALAWNAEQLSSGSR.2b3_1.heavy 895.469 / 372.236 20088.0 33.010398864746094 42 12 10 10 10 0.8087408194806863 62.57356695308963 0.0 3 0.8948677993325018 3.772368365131558 20088.0 31.944520799720202 0.0 - - - - - - - 304.0 40 5 FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 369 47 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9442.[MT7]-VGALAWNAEQLSSGSR.2y10_1.heavy 895.469 / 1048.5 7001.0 33.010398864746094 42 12 10 10 10 0.8087408194806863 62.57356695308963 0.0 3 0.8948677993325018 3.772368365131558 7001.0 21.152446633825946 0.0 - - - - - - - 304.0 14 5 FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 371 47 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9442.[MT7]-VGALAWNAEQLSSGSR.2b5_1.heavy 895.469 / 556.357 20393.0 33.010398864746094 42 12 10 10 10 0.8087408194806863 62.57356695308963 0.0 3 0.8948677993325018 3.772368365131558 20393.0 51.80323813840224 0.0 - - - - - - - 304.0 40 4 FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 373 47 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9442.[MT7]-VGALAWNAEQLSSGSR.2y11_1.heavy 895.469 / 1234.58 9131.0 33.010398864746094 42 12 10 10 10 0.8087408194806863 62.57356695308963 0.0 3 0.8948677993325018 3.772368365131558 9131.0 27.58791461412151 0.0 - - - - - - - 304.0 18 3 FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 375 48 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A200.[MT7]-ESFESQFLADTER.3y6_1.heavy 568.273 / 704.357 12659.0 34.860599517822266 44 14 10 10 10 2.1586247090406276 39.47291098396137 0.0 3 0.9390798132001809 4.97452863514026 12659.0 39.24321348972286 0.0 - - - - - - - 258.0 25 3 CUL1 cullin 1 377 48 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A200.[MT7]-ESFESQFLADTER.3b4_1.heavy 568.273 / 637.295 10075.0 34.860599517822266 44 14 10 10 10 2.1586247090406276 39.47291098396137 0.0 3 0.9390798132001809 4.97452863514026 10075.0 22.607225838518243 0.0 - - - - - - - 258.0 20 5 CUL1 cullin 1 379 48 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A200.[MT7]-ESFESQFLADTER.3b3_1.heavy 568.273 / 508.252 4134.0 34.860599517822266 44 14 10 10 10 2.1586247090406276 39.47291098396137 0.0 3 0.9390798132001809 4.97452863514026 4134.0 -0.31388628420791115 2.0 - - - - - - - 258.0 11 3 CUL1 cullin 1 381 48 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A200.[MT7]-ESFESQFLADTER.3y5_1.heavy 568.273 / 591.273 21701.0 34.860599517822266 44 14 10 10 10 2.1586247090406276 39.47291098396137 0.0 3 0.9390798132001809 4.97452863514026 21701.0 40.229830590513075 0.0 - - - - - - - 258.0 43 4 CUL1 cullin 1 383 49 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9582.[MT7]-AALAVLK[MT7].2y4_1.heavy 487.336 / 574.404 89333.0 28.370800018310547 50 20 10 10 10 7.5063431196171875 13.322066205401473 0.0 3 0.9901438636259211 12.420859979385192 89333.0 275.52950993847924 0.0 - - - - - - - 333.0 178 6 CCNA2 cyclin A2 385 49 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9582.[MT7]-AALAVLK[MT7].2y5_1.heavy 487.336 / 687.489 50000.0 28.370800018310547 50 20 10 10 10 7.5063431196171875 13.322066205401473 0.0 3 0.9901438636259211 12.420859979385192 50000.0 172.26941870602786 0.0 - - - - - - - 333.0 100 2 CCNA2 cyclin A2 387 49 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9582.[MT7]-AALAVLK[MT7].2y3_1.heavy 487.336 / 503.367 66667.0 28.370800018310547 50 20 10 10 10 7.5063431196171875 13.322066205401473 0.0 3 0.9901438636259211 12.420859979385192 66667.0 229.69370673749518 0.0 - - - - - - - 333.0 133 2 CCNA2 cyclin A2 389 49 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9582.[MT7]-AALAVLK[MT7].2y6_1.heavy 487.336 / 758.526 59667.0 28.370800018310547 50 20 10 10 10 7.5063431196171875 13.322066205401473 0.0 3 0.9901438636259211 12.420859979385192 59667.0 97.3379716802265 0.0 - - - - - - - 333.0 119 4 CCNA2 cyclin A2 391 50 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9439.[MT7]-LRLDPDSEIATTGVR.3b6_1.heavy 596.331 / 854.485 18333.0 28.760499954223633 43 13 10 10 10 1.5931903376230194 50.01360274593501 0.0 3 0.9207585135191914 4.354874267590538 18333.0 35.474354999999996 0.0 - - - - - - - 333.0 36 6 PIAS4 protein inhibitor of activated STAT, 4 393 50 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9439.[MT7]-LRLDPDSEIATTGVR.3y6_1.heavy 596.331 / 604.341 94000.0 28.760499954223633 43 13 10 10 10 1.5931903376230194 50.01360274593501 0.0 3 0.9207585135191914 4.354874267590538 94000.0 57.46049046537162 0.0 - - - - - - - 333.0 188 2 PIAS4 protein inhibitor of activated STAT, 4 395 50 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9439.[MT7]-LRLDPDSEIATTGVR.3b4_1.heavy 596.331 / 642.406 32667.0 28.760499954223633 43 13 10 10 10 1.5931903376230194 50.01360274593501 0.0 3 0.9207585135191914 4.354874267590538 32667.0 46.08574386840977 0.0 - - - - - - - 333.0 65 2 PIAS4 protein inhibitor of activated STAT, 4 397 50 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9439.[MT7]-LRLDPDSEIATTGVR.3y5_1.heavy 596.331 / 533.304 52000.0 28.760499954223633 43 13 10 10 10 1.5931903376230194 50.01360274593501 0.0 3 0.9207585135191914 4.354874267590538 52000.0 86.71945986496624 0.0 - - - - - - - 333.0 104 2 PIAS4 protein inhibitor of activated STAT, 4 399 51 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A11.[MT7]-TELLR.2y4_1.heavy 388.243 / 530.33 18904.0 23.196399688720703 37 17 2 10 8 4.14897059761516 24.102364103876823 0.0 4 0.9762382519397637 7.990232911497318 18904.0 19.525714285714283 0.0 - - - - - - - 278.0 37 6 CCDC141;PPL;CDC25C coiled-coil domain containing 141;periplakin;cell division cycle 25 homolog C (S. pombe) 401 51 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A11.[MT7]-TELLR.2b3_1.heavy 388.243 / 488.284 27244.0 23.196399688720703 37 17 2 10 8 4.14897059761516 24.102364103876823 0.0 4 0.9762382519397637 7.990232911497318 27244.0 12.388833333333334 0.0 - - - - - - - 278.0 54 1 CCDC141;PPL;CDC25C coiled-coil domain containing 141;periplakin;cell division cycle 25 homolog C (S. pombe) 403 51 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A11.[MT7]-TELLR.2b4_1.heavy 388.243 / 601.368 10008.0 23.196399688720703 37 17 2 10 8 4.14897059761516 24.102364103876823 0.0 4 0.9762382519397637 7.990232911497318 10008.0 7.524 2.0 - - - - - - - 714.8571428571429 116 7 CCDC141;PPL;CDC25C coiled-coil domain containing 141;periplakin;cell division cycle 25 homolog C (S. pombe) 405 51 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A11.[MT7]-TELLR.2y3_1.heavy 388.243 / 401.287 8896.0 23.196399688720703 37 17 2 10 8 4.14897059761516 24.102364103876823 0.0 4 0.9762382519397637 7.990232911497318 8896.0 40.64 0.0 - - - - - - - 278.0 17 3 CCDC141;PPL;CDC25C coiled-coil domain containing 141;periplakin;cell division cycle 25 homolog C (S. pombe) 407 52 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A10.[MT7]-K[MT7]PPPYLR.3y6_1.heavy 386.913 / 742.425 91806.0 21.058700561523438 48 18 10 10 10 2.980579636058268 22.998247082375247 0.0 3 0.9835088315960854 9.597055546609342 91806.0 76.9244173935819 0.0 - - - - - - - 253.0 183 3 UBE2L6 ubiquitin-conjugating enzyme E2L 6 409 52 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A10.[MT7]-K[MT7]PPPYLR.3y4_1.heavy 386.913 / 548.319 119120.0 21.058700561523438 48 18 10 10 10 2.980579636058268 22.998247082375247 0.0 3 0.9835088315960854 9.597055546609342 119120.0 108.50216341498714 0.0 - - - - - - - 253.0 238 1 UBE2L6 ubiquitin-conjugating enzyme E2L 6 411 52 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A10.[MT7]-K[MT7]PPPYLR.3y1_1.heavy 386.913 / 175.119 30602.0 21.058700561523438 48 18 10 10 10 2.980579636058268 22.998247082375247 0.0 3 0.9835088315960854 9.597055546609342 30602.0 10.000079356012778 1.0 - - - - - - - 1601.3333333333333 91 3 UBE2L6 ubiquitin-conjugating enzyme E2L 6 413 52 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A10.[MT7]-K[MT7]PPPYLR.3y5_1.heavy 386.913 / 645.372 97117.0 21.058700561523438 48 18 10 10 10 2.980579636058268 22.998247082375247 0.0 3 0.9835088315960854 9.597055546609342 97117.0 77.70046364978202 0.0 - - - - - - - 569.25 194 4 UBE2L6 ubiquitin-conjugating enzyme E2L 6 415 53 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9302.[MT7]-C[CAM]C[CAM]VVGTLFK[MT7].2b3_1.heavy 686.372 / 564.239 30167.0 32.50320053100586 50 20 10 10 10 5.957755205639503 16.784845390314427 0.0 3 0.9936882695308389 15.52599540884079 30167.0 102.79090192253983 0.0 - - - - - - - 314.0 60 6 POLD2 polymerase (DNA directed), delta 2, regulatory subunit 50kDa 417 53 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9302.[MT7]-C[CAM]C[CAM]VVGTLFK[MT7].2y5_1.heavy 686.372 / 709.437 30481.0 32.50320053100586 50 20 10 10 10 5.957755205639503 16.784845390314427 0.0 3 0.9936882695308389 15.52599540884079 30481.0 22.61770117751976 1.0 - - - - - - - 314.0 69 3 POLD2 polymerase (DNA directed), delta 2, regulatory subunit 50kDa 419 53 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9302.[MT7]-C[CAM]C[CAM]VVGTLFK[MT7].2b4_1.heavy 686.372 / 663.307 22625.0 32.50320053100586 50 20 10 10 10 5.957755205639503 16.784845390314427 0.0 3 0.9936882695308389 15.52599540884079 22625.0 22.515478660806696 0.0 - - - - - - - 314.0 45 2 POLD2 polymerase (DNA directed), delta 2, regulatory subunit 50kDa 421 53 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9302.[MT7]-C[CAM]C[CAM]VVGTLFK[MT7].2y6_1.heavy 686.372 / 808.505 21997.0 32.50320053100586 50 20 10 10 10 5.957755205639503 16.784845390314427 0.0 3 0.9936882695308389 15.52599540884079 21997.0 23.919217580488258 0.0 - - - - - - - 314.0 43 7 POLD2 polymerase (DNA directed), delta 2, regulatory subunit 50kDa 423 54 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A14.[MT7]-TPVGK[MT7].2y4_1.heavy 395.257 / 544.357 158019.0 15.84469985961914 39 11 10 10 8 2.30520368749966 43.38011453923408 0.0 4 0.8524577680332946 3.172589296091842 158019.0 50.57575827696535 1.0 - - - - - - - 249.33333333333334 351 3 CDC25C cell division cycle 25 homolog C (S. pombe) 425 54 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A14.[MT7]-TPVGK[MT7].2y3_1.heavy 395.257 / 447.305 14382.0 15.84469985961914 39 11 10 10 8 2.30520368749966 43.38011453923408 0.0 4 0.8524577680332946 3.172589296091842 14382.0 30.486688189966117 1.0 - - - - - - - 303.875 32 8 CDC25C cell division cycle 25 homolog C (S. pombe) 427 54 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A14.[MT7]-TPVGK[MT7].2y2_1.heavy 395.257 / 348.236 31193.0 15.84469985961914 39 11 10 10 8 2.30520368749966 43.38011453923408 0.0 4 0.8524577680332946 3.172589296091842 31193.0 54.068367094991956 0.0 - - - - - - - 773.7142857142857 62 7 CDC25C cell division cycle 25 homolog C (S. pombe) 429 54 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A14.[MT7]-TPVGK[MT7].2y1_1.heavy 395.257 / 291.215 12888.0 15.84469985961914 39 11 10 10 8 2.30520368749966 43.38011453923408 0.0 4 0.8524577680332946 3.172589296091842 12888.0 4.679548304979873 12.0 - - - - - - - 934.0 67 1 CDC25C cell division cycle 25 homolog C (S. pombe) 431 55 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9301.[MT7]-ISDFGLATVFR.2y8_1.heavy 685.383 / 910.515 160780.0 40.58940124511719 48 18 10 10 10 5.7597161952359865 17.36196656403186 0.0 3 0.9893628642556935 11.955405068190178 160780.0 116.07216366621218 0.0 - - - - - - - 433.0 321 2 CHEK1 CHK1 checkpoint homolog (S. pombe) 433 55 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9301.[MT7]-ISDFGLATVFR.2y10_1.heavy 685.383 / 1112.57 204511.0 40.58940124511719 48 18 10 10 10 5.7597161952359865 17.36196656403186 0.0 3 0.9893628642556935 11.955405068190178 204511.0 245.46803100128776 0.0 - - - - - - - 288.5 409 2 CHEK1 CHK1 checkpoint homolog (S. pombe) 435 55 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9301.[MT7]-ISDFGLATVFR.2b5_1.heavy 685.383 / 664.342 40989.0 40.58940124511719 48 18 10 10 10 5.7597161952359865 17.36196656403186 0.0 3 0.9893628642556935 11.955405068190178 40989.0 42.29969813153244 0.0 - - - - - - - 673.4444444444445 81 9 CHEK1 CHK1 checkpoint homolog (S. pombe) 437 55 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9301.[MT7]-ISDFGLATVFR.2y7_1.heavy 685.383 / 763.446 92946.0 40.58940124511719 48 18 10 10 10 5.7597161952359865 17.36196656403186 0.0 3 0.9893628642556935 11.955405068190178 92946.0 100.97477908796341 0.0 - - - - - - - 324.75 185 8 CHEK1 CHK1 checkpoint homolog (S. pombe) 439 56 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9303.[MT7]-IIDFIYTAK[MT7].2y4_1.heavy 686.41 / 626.363 100228.0 38.56769943237305 48 18 10 10 10 4.50278104571231 22.208497145385994 0.0 3 0.9896908803999819 12.144447843811271 100228.0 75.68066135561801 0.0 - - - - - - - 721.0 200 8 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 441 56 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9303.[MT7]-IIDFIYTAK[MT7].2y8_1.heavy 686.41 / 1114.63 50835.0 38.56769943237305 48 18 10 10 10 4.50278104571231 22.208497145385994 0.0 3 0.9896908803999819 12.144447843811271 50835.0 148.59893938958766 1.0 - - - - - - - 247.875 101 8 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 443 56 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9303.[MT7]-IIDFIYTAK[MT7].2y5_1.heavy 686.41 / 739.447 42543.0 38.56769943237305 48 18 10 10 10 4.50278104571231 22.208497145385994 0.0 3 0.9896908803999819 12.144447843811271 42543.0 116.73117521915472 0.0 - - - - - - - 613.0 85 10 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 445 56 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9303.[MT7]-IIDFIYTAK[MT7].2b4_1.heavy 686.41 / 633.373 60750.0 38.56769943237305 48 18 10 10 10 4.50278104571231 22.208497145385994 0.0 3 0.9896908803999819 12.144447843811271 60750.0 65.87658157602664 1.0 - - - - - - - 737.3636363636364 121 11 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 447 57 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9430.[MT7]-TTNEGLLYPNPAAQMLVGDSFAR.3y6_1.heavy 870.443 / 652.305 10536.0 40.495750427246094 39 13 10 6 10 3.1210144639010697 32.04086400644435 0.03710174560546875 3 0.9119001643440258 4.126991696637489 10536.0 24.09752494917948 1.0 - - - - - - - 375.4 21 5 UBE3C ubiquitin protein ligase E3C 449 57 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9430.[MT7]-TTNEGLLYPNPAAQMLVGDSFAR.3b6_1.heavy 870.443 / 760.396 13278.0 40.495750427246094 39 13 10 6 10 3.1210144639010697 32.04086400644435 0.03710174560546875 3 0.9119001643440258 4.126991696637489 13278.0 33.64966444993771 0.0 - - - - - - - 320.6666666666667 26 9 UBE3C ubiquitin protein ligase E3C 451 57 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9430.[MT7]-TTNEGLLYPNPAAQMLVGDSFAR.3b5_1.heavy 870.443 / 647.312 6062.0 40.495750427246094 39 13 10 6 10 3.1210144639010697 32.04086400644435 0.03710174560546875 3 0.9119001643440258 4.126991696637489 6062.0 2.261940298507463 4.0 - - - - - - - 659.5714285714286 20 7 UBE3C ubiquitin protein ligase E3C 453 57 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9430.[MT7]-TTNEGLLYPNPAAQMLVGDSFAR.3b8_1.heavy 870.443 / 1036.54 9959.0 40.495750427246094 39 13 10 6 10 3.1210144639010697 32.04086400644435 0.03710174560546875 3 0.9119001643440258 4.126991696637489 9959.0 15.11399484364049 0.0 - - - - - - - 659.7142857142857 19 7 UBE3C ubiquitin protein ligase E3C 455 58 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A4.[MT7]-LQGQR.2b3_1.heavy 373.225 / 443.273 9727.0 14.805899620056152 46 16 10 10 10 4.4330156383758705 22.55800749591696 0.0 3 0.9659568395710444 6.669720094220304 9727.0 7.132925606694472 3.0 - - - - - - - 684.2222222222222 29 9 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 457 58 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A4.[MT7]-LQGQR.2y4_1.heavy 373.225 / 488.258 61606.0 14.805899620056152 46 16 10 10 10 4.4330156383758705 22.55800749591696 0.0 3 0.9659568395710444 6.669720094220304 61606.0 79.79252832122845 0.0 - - - - - - - 741.0 123 7 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 459 58 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A4.[MT7]-LQGQR.2b4_1.heavy 373.225 / 571.332 17995.0 14.805899620056152 46 16 10 10 10 4.4330156383758705 22.55800749591696 0.0 3 0.9659568395710444 6.669720094220304 17995.0 16.482521683071763 0.0 - - - - - - - 740.8571428571429 35 7 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 461 58 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A4.[MT7]-LQGQR.2y1_1.heavy 373.225 / 175.119 60309.0 14.805899620056152 46 16 10 10 10 4.4330156383758705 22.55800749591696 0.0 3 0.9659568395710444 6.669720094220304 60309.0 4.1735843680244065 1.0 - - - - - - - 2837.0 127 2 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 463 59 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9229.[MT7]-APLGQDPPQR.2y8_1.heavy 611.837 / 910.474 3490.0 19.29800033569336 42 12 10 10 10 2.829779994724457 35.33843626940237 0.0 3 0.8947528472819728 3.7702701186679946 3490.0 7.00510752688172 1.0 - - - - - - - 349.0 11 6 CCNA1 cyclin A1 465 59 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9229.[MT7]-APLGQDPPQR.2y9_1.heavy 611.837 / 1007.53 45137.0 19.29800033569336 42 12 10 10 10 2.829779994724457 35.33843626940237 0.0 3 0.8947528472819728 3.7702701186679946 45137.0 184.24246681879035 1.0 - - - - - - - 233.0 90 3 CCNA1 cyclin A1 467 59 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9229.[MT7]-APLGQDPPQR.2b6_1.heavy 611.837 / 726.39 173568.0 19.29800033569336 42 12 10 10 10 2.829779994724457 35.33843626940237 0.0 3 0.8947528472819728 3.7702701186679946 173568.0 818.7708524560533 0.0 - - - - - - - 233.0 347 2 CCNA1 cyclin A1 469 59 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9229.[MT7]-APLGQDPPQR.2y7_1.heavy 611.837 / 797.39 13029.0 19.29800033569336 42 12 10 10 10 2.829779994724457 35.33843626940237 0.0 3 0.8947528472819728 3.7702701186679946 13029.0 83.4624427800083 0.0 - - - - - - - 291.0 26 4 CCNA1 cyclin A1 471 60 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A3.[MT7]-LDSVR.2b3_1.heavy 367.22 / 460.252 24607.0 19.70159912109375 41 16 9 10 6 10.623815322715792 9.412814225618217 0.0 5 0.9677110478522412 6.8495152692450025 24607.0 15.112535179408281 2.0 - - - - - - - 241.0 52 7 AHNAK2;MYC AHNAK nucleoprotein 2;v-myc myelocytomatosis viral oncogene homolog (avian) 473 60 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A3.[MT7]-LDSVR.2y4_1.heavy 367.22 / 476.246 47766.0 19.70159912109375 41 16 9 10 6 10.623815322715792 9.412814225618217 0.0 5 0.9677110478522412 6.8495152692450025 47766.0 97.3349860828462 2.0 - - - - - - - 361.5 110 2 AHNAK2;MYC AHNAK nucleoprotein 2;v-myc myelocytomatosis viral oncogene homolog (avian) 475 60 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A3.[MT7]-LDSVR.2b4_1.heavy 367.22 / 559.321 22436.0 19.70159912109375 41 16 9 10 6 10.623815322715792 9.412814225618217 0.0 5 0.9677110478522412 6.8495152692450025 22436.0 17.941050086355787 0.0 - - - - - - - 385.6 44 10 AHNAK2;MYC AHNAK nucleoprotein 2;v-myc myelocytomatosis viral oncogene homolog (avian) 477 60 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A3.[MT7]-LDSVR.2b2_1.heavy 367.22 / 373.22 27261.0 19.70159912109375 41 16 9 10 6 10.623815322715792 9.412814225618217 0.0 5 0.9677110478522412 6.8495152692450025 27261.0 33.855385199749755 0.0 - - - - - - - 271.125 54 8 AHNAK2;MYC AHNAK nucleoprotein 2;v-myc myelocytomatosis viral oncogene homolog (avian) 479 61 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 OPPA_ECOLI.LAIAASSLWK.2y7.peptide 530.31 / 762.41 1670790.0 34.332801818847656 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 1670790.0 128.2684968030773 0.0 - - - - - - - 264.0 3341 1 481 61 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 OPPA_ECOLI.LAIAASSLWK.2y8.peptide 530.31 / 875.5 1001840.0 34.332801818847656 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 1001840.0 109.76606748711042 0.0 - - - - - - - 264.0 2003 2 483 61 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 OPPA_ECOLI.LAIAASSLWK.2y6.peptide 530.31 / 691.38 1391940.0 34.332801818847656 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 1391940.0 125.31669243502914 0.0 - - - - - - - 264.0 2783 2 485 62 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9436.[MT7]-LAGTQPLEVLEAVQR.3y6_1.heavy 590.008 / 715.41 174304.0 38.11989974975586 50 20 10 10 10 5.549626154361357 18.01923178580447 0.0 3 0.9908204820037924 12.87121819534558 174304.0 898.05831631745 0.0 - - - - - - - 188.0 348 7 UBA1 ubiquitin-like modifier activating enzyme 1 487 62 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9436.[MT7]-LAGTQPLEVLEAVQR.3b5_1.heavy 590.008 / 615.358 357060.0 38.11989974975586 50 20 10 10 10 5.549626154361357 18.01923178580447 0.0 3 0.9908204820037924 12.87121819534558 357060.0 1004.0956545694219 0.0 - - - - - - - 235.0 714 4 UBA1 ubiquitin-like modifier activating enzyme 1 489 62 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9436.[MT7]-LAGTQPLEVLEAVQR.3y8_1.heavy 590.008 / 943.521 130352.0 38.11989974975586 50 20 10 10 10 5.549626154361357 18.01923178580447 0.0 3 0.9908204820037924 12.87121819534558 130352.0 767.7227674136396 0.0 - - - - - - - 263.2 260 5 UBA1 ubiquitin-like modifier activating enzyme 1 491 62 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9436.[MT7]-LAGTQPLEVLEAVQR.3y5_1.heavy 590.008 / 602.326 200412.0 38.11989974975586 50 20 10 10 10 5.549626154361357 18.01923178580447 0.0 3 0.9908204820037924 12.87121819534558 200412.0 330.66184540187203 0.0 - - - - - - - 724.1428571428571 400 7 UBA1 ubiquitin-like modifier activating enzyme 1 493 63 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A6.[MT7]-NVVGAR.2y4_1.heavy 380.233 / 402.246 43726.0 15.935400009155273 34 16 2 10 6 1.9355400569782908 34.89425455062921 0.0 5 0.9640719366412362 6.4913725592687745 43726.0 33.65972382860389 0.0 - - - - - - - 303.0 87 5 YWHAB;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 495 63 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A6.[MT7]-NVVGAR.2y5_1.heavy 380.233 / 501.314 61897.0 15.935400009155273 34 16 2 10 6 1.9355400569782908 34.89425455062921 0.0 5 0.9640719366412362 6.4913725592687745 61897.0 107.84630671347082 1.0 - - - - - - - 315.6666666666667 355 6 YWHAB;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 497 63 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A6.[MT7]-NVVGAR.2b4_1.heavy 380.233 / 514.311 24418.0 15.935400009155273 34 16 2 10 6 1.9355400569782908 34.89425455062921 0.0 5 0.9640719366412362 6.4913725592687745 24418.0 74.9166875564215 0.0 - - - - - - - 294.55555555555554 48 9 YWHAB;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 499 63 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A6.[MT7]-NVVGAR.2b1_1.heavy 380.233 / 259.152 39751.0 15.935400009155273 34 16 2 10 6 1.9355400569782908 34.89425455062921 0.0 5 0.9640719366412362 6.4913725592687745 39751.0 75.23296654929578 1.0 - - - - - - - 284.0 230 6 YWHAB;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 501 64 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9435.[MT7]-IIQDIETIESNWR.3y7_1.heavy 587.648 / 905.448 43309.0 44.90420150756836 48 18 10 10 10 5.406886966405177 18.494930746903705 0.0 3 0.9864566699195733 10.592738889441634 43309.0 524.410744949495 0.0 - - - - - - - 231.0 86 8 FBXW11;BTRC F-box and WD repeat domain containing 11;beta-transducin repeat containing 503 64 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9435.[MT7]-IIQDIETIESNWR.3b4_1.heavy 587.648 / 614.363 161530.0 44.90420150756836 48 18 10 10 10 5.406886966405177 18.494930746903705 0.0 3 0.9864566699195733 10.592738889441634 161530.0 949.6198223886037 0.0 - - - - - - - 216.0 323 11 FBXW11;BTRC F-box and WD repeat domain containing 11;beta-transducin repeat containing 505 64 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9435.[MT7]-IIQDIETIESNWR.3y4_1.heavy 587.648 / 562.273 82217.0 44.90420150756836 48 18 10 10 10 5.406886966405177 18.494930746903705 0.0 3 0.9864566699195733 10.592738889441634 82217.0 164.7009383116883 0.0 - - - - - - - 272.8 164 10 FBXW11;BTRC F-box and WD repeat domain containing 11;beta-transducin repeat containing 507 64 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9435.[MT7]-IIQDIETIESNWR.3y5_1.heavy 587.648 / 691.316 127375.0 44.90420150756836 48 18 10 10 10 5.406886966405177 18.494930746903705 0.0 3 0.9864566699195733 10.592738889441634 127375.0 429.39170194944523 0.0 - - - - - - - 253.0 254 8 FBXW11;BTRC F-box and WD repeat domain containing 11;beta-transducin repeat containing 509 65 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A5.[MT7]-LPDIR.2b3_1.heavy 379.238 / 470.273 205759.0 26.63330078125 44 14 10 10 10 1.1604882530667722 54.40957754910043 0.0 3 0.9479145857507929 5.38394991834074 205759.0 170.04931994694644 0.0 - - - - - - - 326.0 411 1 POLA2 polymerase (DNA directed), alpha 2 (70kD subunit) 511 65 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A5.[MT7]-LPDIR.2y4_1.heavy 379.238 / 500.283 55021.0 26.63330078125 44 14 10 10 10 1.1604882530667722 54.40957754910043 0.0 3 0.9479145857507929 5.38394991834074 55021.0 -0.3918872563897656 2.0 - - - - - - - 326.0 112 3 POLA2 polymerase (DNA directed), alpha 2 (70kD subunit) 513 65 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A5.[MT7]-LPDIR.2y3_1.heavy 379.238 / 403.23 4232.0 26.63330078125 44 14 10 10 10 1.1604882530667722 54.40957754910043 0.0 3 0.9479145857507929 5.38394991834074 4232.0 17.53312977674743 0.0 - - - - - - - 326.0 8 6 POLA2 polymerase (DNA directed), alpha 2 (70kD subunit) 515 65 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A5.[MT7]-LPDIR.2y2_1.heavy 379.238 / 288.203 342498.0 26.63330078125 44 14 10 10 10 1.1604882530667722 54.40957754910043 0.0 3 0.9479145857507929 5.38394991834074 342498.0 300.8508695050408 0.0 - - - - - - - 326.0 684 1 POLA2 polymerase (DNA directed), alpha 2 (70kD subunit) 517 66 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9433.[MT7]-LFSLELVDESGEIR.3y7_1.heavy 584.316 / 805.369 40420.0 40.83594989776611 46 20 10 6 10 17.16946755143587 5.824292436583864 0.036602020263671875 3 0.9975440949570974 24.898183427310165 40420.0 106.91829472977508 0.0 - - - - - - - 776.25 80 8 RPA1 replication protein A1, 70kDa 519 66 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9433.[MT7]-LFSLELVDESGEIR.3y6_1.heavy 584.316 / 690.342 19727.0 40.83594989776611 46 20 10 6 10 17.16946755143587 5.824292436583864 0.036602020263671875 3 0.9975440949570974 24.898183427310165 19727.0 65.75666666666666 0.0 - - - - - - - 331.2 39 10 RPA1 replication protein A1, 70kDa 521 66 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9433.[MT7]-LFSLELVDESGEIR.3b4_1.heavy 584.316 / 605.378 9519.0 40.83594989776611 46 20 10 6 10 17.16946755143587 5.824292436583864 0.036602020263671875 3 0.9975440949570974 24.898183427310165 9519.0 30.12050724637681 0.0 - - - - - - - 690.0 19 8 RPA1 replication protein A1, 70kDa 523 66 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9433.[MT7]-LFSLELVDESGEIR.3y5_1.heavy 584.316 / 561.299 25107.0 40.83594989776611 46 20 10 6 10 17.16946755143587 5.824292436583864 0.036602020263671875 3 0.9975440949570974 24.898183427310165 25107.0 32.57195384243596 0.0 - - - - - - - 301.09090909090907 50 11 RPA1 replication protein A1, 70kDa 525 67 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A7.[MT7]-TQITR.2b3_1.heavy 381.733 / 487.3 19489.0 15.184499740600586 42 16 8 10 8 2.926501040537156 26.382689448077084 0.0 4 0.9653827219071658 6.613860680175079 19489.0 23.55818424766092 0.0 - - - - - - - 689.7142857142857 38 7 SHC3 SHC (Src homology 2 domain containing) transforming protein 3 527 67 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A7.[MT7]-TQITR.2y4_1.heavy 381.733 / 517.309 44843.0 15.184499740600586 42 16 8 10 8 2.926501040537156 26.382689448077084 0.0 4 0.9653827219071658 6.613860680175079 44843.0 76.20702149698417 0.0 - - - - - - - 1157.857142857143 89 7 SHC3 SHC (Src homology 2 domain containing) transforming protein 3 529 67 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A7.[MT7]-TQITR.2y3_1.heavy 381.733 / 389.251 16385.0 15.184499740600586 42 16 8 10 8 2.926501040537156 26.382689448077084 0.0 4 0.9653827219071658 6.613860680175079 16385.0 23.351484092215365 0.0 - - - - - - - 689.6666666666666 32 12 SHC3 SHC (Src homology 2 domain containing) transforming protein 3 531 67 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A7.[MT7]-TQITR.2y1_1.heavy 381.733 / 175.119 38806.0 15.184499740600586 42 16 8 10 8 2.926501040537156 26.382689448077084 0.0 4 0.9653827219071658 6.613860680175079 38806.0 9.20427592434492 1.0 - - - - - - - 1250.5 121 4 SHC3 SHC (Src homology 2 domain containing) transforming protein 3 533 68 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A75.[MT7]-ILVDFR.2y4_1.heavy 453.78 / 536.283 18732.0 33.710601806640625 44 14 10 10 10 3.1232815549174333 32.017606559535295 0.0 3 0.9309125263043942 4.667991622429414 18732.0 75.86593658869516 0.0 - - - - - - - 284.0 37 4 CHEK1 CHK1 checkpoint homolog (S. pombe) 535 68 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A75.[MT7]-ILVDFR.2b3_1.heavy 453.78 / 470.346 29800.0 33.710601806640625 44 14 10 10 10 3.1232815549174333 32.017606559535295 0.0 3 0.9309125263043942 4.667991622429414 29800.0 132.60090034921632 0.0 - - - - - - - 284.0 59 6 CHEK1 CHK1 checkpoint homolog (S. pombe) 537 68 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A75.[MT7]-ILVDFR.2y5_1.heavy 453.78 / 649.367 74926.0 33.710601806640625 44 14 10 10 10 3.1232815549174333 32.017606559535295 0.0 3 0.9309125263043942 4.667991622429414 74926.0 121.89390109625612 0.0 - - - - - - - 284.0 149 1 CHEK1 CHK1 checkpoint homolog (S. pombe) 539 68 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A75.[MT7]-ILVDFR.2b4_1.heavy 453.78 / 585.373 283812.0 33.710601806640625 44 14 10 10 10 3.1232815549174333 32.017606559535295 0.0 3 0.9309125263043942 4.667991622429414 283812.0 1045.3406774558557 0.0 - - - - - - - 284.0 567 1 CHEK1 CHK1 checkpoint homolog (S. pombe) 541 69 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9.[MT7]-SVYTR.2b3_1.heavy 385.22 / 494.273 15677.0 16.727399826049805 29 13 0 10 6 1.8198347959753705 43.773275769574276 0.0 5 0.9265125063470074 4.5243841799623565 15677.0 46.00429471032746 0.0 - - - - - - - 264.3333333333333 31 3 PAK1 p21 protein (Cdc42/Rac)-activated kinase 1 543 69 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9.[MT7]-SVYTR.2y4_1.heavy 385.22 / 538.298 27187.0 16.727399826049805 29 13 0 10 6 1.8198347959753705 43.773275769574276 0.0 5 0.9265125063470074 4.5243841799623565 27187.0 52.54150491107825 0.0 - - - - - - - 768.875 54 8 PAK1 p21 protein (Cdc42/Rac)-activated kinase 1 545 69 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9.[MT7]-SVYTR.2y3_1.heavy 385.22 / 439.23 10319.0 16.727399826049805 29 13 0 10 6 1.8198347959753705 43.773275769574276 0.0 5 0.9265125063470074 4.5243841799623565 10319.0 48.605869017632244 0.0 - - - - - - - 347.25 20 8 PAK1 p21 protein (Cdc42/Rac)-activated kinase 1 547 69 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9.[MT7]-SVYTR.2y1_1.heavy 385.22 / 175.119 20440.0 16.727399826049805 29 13 0 10 6 1.8198347959753705 43.773275769574276 0.0 5 0.9265125063470074 4.5243841799623565 20440.0 5.415222219192443 2.0 - - - - - - - 1786.0 349 1 PAK1 p21 protein (Cdc42/Rac)-activated kinase 1 549 70 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A73.[MT7]-APDSTLR.2y4_1.heavy 452.254 / 476.283 30212.0 18.311899185180664 39 15 10 10 4 2.131964877593771 46.90508790785728 0.0 10 0.952537350155977 5.6422653033232155 30212.0 19.25130447099756 1.0 - - - - - - - 438.0 105 3 MGRN1 mahogunin, ring finger 1 551 70 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A73.[MT7]-APDSTLR.2y5_1.heavy 452.254 / 591.31 8319.0 18.311899185180664 39 15 10 10 4 2.131964877593771 46.90508790785728 0.0 10 0.952537350155977 5.6422653033232155 8319.0 16.659706457925637 0.0 - - - - - - - 375.42857142857144 16 7 MGRN1 mahogunin, ring finger 1 553 70 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A73.[MT7]-APDSTLR.2y6_1.heavy 452.254 / 688.362 80347.0 18.311899185180664 39 15 10 10 4 2.131964877593771 46.90508790785728 0.0 10 0.952537350155977 5.6422653033232155 80347.0 184.5249203182852 0.0 - - - - - - - 328.5 160 6 MGRN1 mahogunin, ring finger 1 555 70 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A73.[MT7]-APDSTLR.2y1_1.heavy 452.254 / 175.119 11384.0 18.311899185180664 39 15 10 10 4 2.131964877593771 46.90508790785728 0.0 10 0.952537350155977 5.6422653033232155 11384.0 4.044470714669532 11.0 - - - - - - - 1095.0 126 1 MGRN1 mahogunin, ring finger 1 557 71 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A70.[MT7]-GLDGLK[MT7].2y4_1.heavy 445.781 / 576.347 37028.0 24.32490062713623 42 17 10 5 10 2.0416363985690356 38.350817130822016 0.04680061340332031 3 0.971256182943043 7.261801117675359 37028.0 35.36734103132145 0.0 - - - - - - - 296.0 74 4 MID2;MID1 midline 2;midline 1 (Opitz/BBB syndrome) 559 71 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A70.[MT7]-GLDGLK[MT7].2y5_1.heavy 445.781 / 689.431 18662.0 24.32490062713623 42 17 10 5 10 2.0416363985690356 38.350817130822016 0.04680061340332031 3 0.971256182943043 7.261801117675359 18662.0 43.33238083019729 0.0 - - - - - - - 296.0 37 6 MID2;MID1 midline 2;midline 1 (Opitz/BBB syndrome) 561 71 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A70.[MT7]-GLDGLK[MT7].2y3_1.heavy 445.781 / 461.32 100420.0 24.32490062713623 42 17 10 5 10 2.0416363985690356 38.350817130822016 0.04680061340332031 3 0.971256182943043 7.261801117675359 100420.0 119.72341304767835 0.0 - - - - - - - 296.0 200 6 MID2;MID1 midline 2;midline 1 (Opitz/BBB syndrome) 563 71 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A70.[MT7]-GLDGLK[MT7].2b5_1.heavy 445.781 / 600.347 46211.0 24.32490062713623 42 17 10 5 10 2.0416363985690356 38.350817130822016 0.04680061340332031 3 0.971256182943043 7.261801117675359 46211.0 46.00517542282262 0.0 - - - - - - - 719.2857142857143 92 7 MID2;MID1 midline 2;midline 1 (Opitz/BBB syndrome) 565 72 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9329.[MT7]-LSPENEPDLK[MT7].2y4_1.heavy 715.392 / 616.379 12421.0 24.94309949874878 39 14 10 5 10 2.5434061463543096 39.31735406998953 0.04440116882324219 3 0.9352583472834312 4.823908734328164 12421.0 6.132117248979059 1.0 - - - - - - - 303.0 24 1 UBE3C ubiquitin protein ligase E3C 567 72 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9329.[MT7]-LSPENEPDLK[MT7].2y8_1.heavy 715.392 / 1085.56 12421.0 24.94309949874878 39 14 10 5 10 2.5434061463543096 39.31735406998953 0.04440116882324219 3 0.9352583472834312 4.823908734328164 12421.0 80.75699669966997 0.0 - - - - - - - 303.0 24 8 UBE3C ubiquitin protein ligase E3C 569 72 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9329.[MT7]-LSPENEPDLK[MT7].2b6_1.heavy 715.392 / 814.406 7574.0 24.94309949874878 39 14 10 5 10 2.5434061463543096 39.31735406998953 0.04440116882324219 3 0.9352583472834312 4.823908734328164 7574.0 24.974009492472128 1.0 - - - - - - - 303.0 15 3 UBE3C ubiquitin protein ligase E3C 571 72 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9329.[MT7]-LSPENEPDLK[MT7].2b5_1.heavy 715.392 / 685.364 2424.0 24.94309949874878 39 14 10 5 10 2.5434061463543096 39.31735406998953 0.04440116882324219 3 0.9352583472834312 4.823908734328164 2424.0 2.0 7.0 - - - - - - - 303.0 5 4 UBE3C ubiquitin protein ligase E3C 573 73 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A8989.[MT7]-AFNLR.2y4_1.heavy 382.73 / 549.314 103863.0 25.328699111938477 46 16 10 10 10 2.550012424246279 32.14148519444566 0.0 3 0.9647382208299019 6.552782629465396 103863.0 383.20152825442983 0.0 - - - - - - - 308.0 207 1 UBE2L6 ubiquitin-conjugating enzyme E2L 6 575 73 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A8989.[MT7]-AFNLR.2b3_1.heavy 382.73 / 477.258 69961.0 25.328699111938477 46 16 10 10 10 2.550012424246279 32.14148519444566 0.0 3 0.9647382208299019 6.552782629465396 69961.0 69.35898700363578 0.0 - - - - - - - 308.0 139 1 UBE2L6 ubiquitin-conjugating enzyme E2L 6 577 73 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A8989.[MT7]-AFNLR.2b4_1.heavy 382.73 / 590.342 29587.0 25.328699111938477 46 16 10 10 10 2.550012424246279 32.14148519444566 0.0 3 0.9647382208299019 6.552782629465396 29587.0 63.29318254506687 0.0 - - - - - - - 308.0 59 5 UBE2L6 ubiquitin-conjugating enzyme E2L 6 579 73 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A8989.[MT7]-AFNLR.2y3_1.heavy 382.73 / 402.246 12944.0 25.328699111938477 46 16 10 10 10 2.550012424246279 32.14148519444566 0.0 3 0.9647382208299019 6.552782629465396 12944.0 46.39165729792595 0.0 - - - - - - - 308.0 25 4 UBE2L6 ubiquitin-conjugating enzyme E2L 6 581 74 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9328.[MT7]-EFYEVVQSQR.3b4_1.heavy 476.913 / 713.326 34000.0 28.938249588012695 43 20 10 3 10 7.423465080460003 13.47079819412357 0.051300048828125 3 0.9955383050582441 18.469316635929452 34000.0 140.8304856580719 0.0 - - - - - - - 333.0 68 6 CDC45 cell division cycle 45 homolog (S. cerevisiae) 583 74 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9328.[MT7]-EFYEVVQSQR.3b5_1.heavy 476.913 / 812.395 9333.0 28.938249588012695 43 20 10 3 10 7.423465080460003 13.47079819412357 0.051300048828125 3 0.9955383050582441 18.469316635929452 9333.0 12.673103448275864 1.0 - - - - - - - 333.0 18 1 CDC45 cell division cycle 45 homolog (S. cerevisiae) 585 74 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9328.[MT7]-EFYEVVQSQR.3b3_1.heavy 476.913 / 584.284 23000.0 28.938249588012695 43 20 10 3 10 7.423465080460003 13.47079819412357 0.051300048828125 3 0.9955383050582441 18.469316635929452 23000.0 25.28892188756576 0.0 - - - - - - - 333.0 46 5 CDC45 cell division cycle 45 homolog (S. cerevisiae) 587 74 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9328.[MT7]-EFYEVVQSQR.3y5_1.heavy 476.913 / 617.337 19667.0 28.938249588012695 43 20 10 3 10 7.423465080460003 13.47079819412357 0.051300048828125 3 0.9955383050582441 18.469316635929452 19667.0 40.28104643539058 0.0 - - - - - - - 333.0 39 7 CDC45 cell division cycle 45 homolog (S. cerevisiae) 589 75 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9327.[MT7]-EFYEVVQSQR.2y8_1.heavy 714.866 / 1008.51 19667.0 28.912599563598633 46 16 10 10 10 1.8895311393218792 36.90433486015385 0.0 3 0.9642436887606398 6.507038609775003 19667.0 68.64657558533777 0.0 - - - - - - - 333.0 39 4 CDC45 cell division cycle 45 homolog (S. cerevisiae) 591 75 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9327.[MT7]-EFYEVVQSQR.2b4_1.heavy 714.866 / 713.326 33000.0 28.912599563598633 46 16 10 10 10 1.8895311393218792 36.90433486015385 0.0 3 0.9642436887606398 6.507038609775003 33000.0 65.00999999999999 0.0 - - - - - - - 667.0 66 3 CDC45 cell division cycle 45 homolog (S. cerevisiae) 593 75 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9327.[MT7]-EFYEVVQSQR.2y9_1.heavy 714.866 / 1155.58 25667.0 28.912599563598633 46 16 10 10 10 1.8895311393218792 36.90433486015385 0.0 3 0.9642436887606398 6.507038609775003 25667.0 94.79273674274424 0.0 - - - - - - - 333.0 51 3 CDC45 cell division cycle 45 homolog (S. cerevisiae) 595 75 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9327.[MT7]-EFYEVVQSQR.2b5_1.heavy 714.866 / 812.395 14000.0 28.912599563598633 46 16 10 10 10 1.8895311393218792 36.90433486015385 0.0 3 0.9642436887606398 6.507038609775003 14000.0 29.250709827718826 1.0 - - - - - - - 333.0 31 3 CDC45 cell division cycle 45 homolog (S. cerevisiae) 597 76 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A8993.[MT7]-APDAK[MT7].2b3_1.heavy 395.239 / 428.226 31046.0 14.304100036621094 41 13 10 10 8 1.751483422766557 46.353018553295506 0.0 4 0.9197776106474864 4.32780373947781 31046.0 47.887633301112984 0.0 - - - - - - - 674.3 62 10 SHC3 SHC (Src homology 2 domain containing) transforming protein 3 599 76 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A8993.[MT7]-APDAK[MT7].2y4_1.heavy 395.239 / 574.332 106904.0 14.304100036621094 41 13 10 10 8 1.751483422766557 46.353018553295506 0.0 4 0.9197776106474864 4.32780373947781 106904.0 394.39079478054566 0.0 - - - - - - - 800.6 213 10 SHC3 SHC (Src homology 2 domain containing) transforming protein 3 601 76 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A8993.[MT7]-APDAK[MT7].2y3_1.heavy 395.239 / 477.279 9974.0 14.304100036621094 41 13 10 10 8 1.751483422766557 46.353018553295506 0.0 4 0.9197776106474864 4.32780373947781 9974.0 37.905938242280286 0.0 - - - - - - - 291.46153846153845 19 13 SHC3 SHC (Src homology 2 domain containing) transforming protein 3 603 76 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A8993.[MT7]-APDAK[MT7].2y2_1.heavy 395.239 / 362.252 71644.0 14.304100036621094 41 13 10 10 8 1.751483422766557 46.353018553295506 0.0 4 0.9197776106474864 4.32780373947781 71644.0 49.61667012580281 1.0 - - - - - - - 782.4285714285714 149 7 SHC3 SHC (Src homology 2 domain containing) transforming protein 3 605 77 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9336.[MT7]-LQPILDSFPK[MT7].2y4_1.heavy 723.434 / 622.368 36927.0 36.17070007324219 44 14 10 10 10 2.250418785607667 44.436173675557725 0.0 3 0.9427092046678813 5.131264394992414 36927.0 91.5256804550534 0.0 - - - - - - - 298.0 73 10 AIRE autoimmune regulator 607 77 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9336.[MT7]-LQPILDSFPK[MT7].2y8_1.heavy 723.434 / 1060.62 46789.0 36.17070007324219 44 14 10 10 10 2.250418785607667 44.436173675557725 0.0 3 0.9427092046678813 5.131264394992414 46789.0 239.0017226288495 0.0 - - - - - - - 286.5 93 8 AIRE autoimmune regulator 609 77 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9336.[MT7]-LQPILDSFPK[MT7].2y5_1.heavy 723.434 / 737.395 11468.0 36.17070007324219 44 14 10 10 10 2.250418785607667 44.436173675557725 0.0 3 0.9427092046678813 5.131264394992414 11468.0 7.4675581395348845 1.0 - - - - - - - 275.0 22 5 AIRE autoimmune regulator 611 77 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9336.[MT7]-LQPILDSFPK[MT7].2y3_1.heavy 723.434 / 535.336 8028.0 36.17070007324219 44 14 10 10 10 2.250418785607667 44.436173675557725 0.0 3 0.9427092046678813 5.131264394992414 8028.0 18.10459283004755 1.0 - - - - - - - 360.42857142857144 33 7 AIRE autoimmune regulator 613 78 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A8994.[MT7]-LIAGK[MT7].2b3_1.heavy 395.275 / 442.315 12849.0 21.96885061264038 36 10 10 6 10 0.707126450778442 81.09374658787686 0.03740119934082031 3 0.8412823157446573 3.0558403866470782 12849.0 50.507902010677036 0.0 - - - - - - - 262.0 25 3 UBA1 ubiquitin-like modifier activating enzyme 1 615 78 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A8994.[MT7]-LIAGK[MT7].2y4_1.heavy 395.275 / 532.357 95714.0 21.96885061264038 36 10 10 6 10 0.707126450778442 81.09374658787686 0.03740119934082031 3 0.8412823157446573 3.0558403866470782 95714.0 8.820895968560597 0.0 - - - - - - - 1049.0 191 2 UBA1 ubiquitin-like modifier activating enzyme 1 617 78 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A8994.[MT7]-LIAGK[MT7].2y3_1.heavy 395.275 / 419.273 65557.0 21.96885061264038 36 10 10 6 10 0.707126450778442 81.09374658787686 0.03740119934082031 3 0.8412823157446573 3.0558403866470782 65557.0 10.528172336551005 0.0 - - - - - - - 611.6666666666666 131 3 UBA1 ubiquitin-like modifier activating enzyme 1 619 78 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A8994.[MT7]-LIAGK[MT7].2y1_1.heavy 395.275 / 291.215 42743.0 21.96885061264038 36 10 10 6 10 0.707126450778442 81.09374658787686 0.03740119934082031 3 0.8412823157446573 3.0558403866470782 42743.0 10.649725575372516 0.0 - - - - - - - 3409.0 85 1 UBA1 ubiquitin-like modifier activating enzyme 1 621 79 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9337.[MT7]-VFDLPESLGGIR.2b3_1.heavy 723.907 / 506.273 58384.0 38.35990047454834 39 17 10 2 10 4.097781805389311 24.403446730248604 0.08259963989257812 3 0.9739579035293877 7.630928261517149 58384.0 54.330184639255236 0.0 - - - - - - - 220.8 116 5 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 623 79 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9337.[MT7]-VFDLPESLGGIR.2y8_1.heavy 723.907 / 828.457 57095.0 38.35990047454834 39 17 10 2 10 4.097781805389311 24.403446730248604 0.08259963989257812 3 0.9739579035293877 7.630928261517149 57095.0 66.06864906325363 0.0 - - - - - - - 368.0 114 1 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 625 79 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9337.[MT7]-VFDLPESLGGIR.2y11_1.heavy 723.907 / 1203.64 19154.0 38.35990047454834 39 17 10 2 10 4.097781805389311 24.403446730248604 0.08259963989257812 3 0.9739579035293877 7.630928261517149 19154.0 105.00245632994496 0.0 - - - - - - - 276.0 38 2 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 627 79 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9337.[MT7]-VFDLPESLGGIR.2y9_1.heavy 723.907 / 941.542 26153.0 38.35990047454834 39 17 10 2 10 4.097781805389311 24.403446730248604 0.08259963989257812 3 0.9739579035293877 7.630928261517149 26153.0 63.5273800147864 0.0 - - - - - - - 341.7142857142857 52 7 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 629 80 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A8995.[MT7]-VLLFR.2b3_1.heavy 396.267 / 470.346 62323.0 33.807899475097656 50 20 10 10 10 8.903781657842105 11.231182866206504 0.0 3 0.9951049364426313 17.632174886149958 62323.0 111.84533683354698 0.0 - - - - - - - 721.5 124 4 SHANK2;ECHDC2;SHANK3;UBE3B SH3 and multiple ankyrin repeat domains 2;enoyl CoA hydratase domain containing 2;SH3 and multiple ankyrin repeat domains 3;ubiquitin protein ligase E3B 631 80 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A8995.[MT7]-VLLFR.2y4_1.heavy 396.267 / 548.356 162731.0 33.807899475097656 50 20 10 10 10 8.903781657842105 11.231182866206504 0.0 3 0.9951049364426313 17.632174886149958 162731.0 97.13781037178613 0.0 - - - - - - - 289.0 325 1 SHANK2;ECHDC2;SHANK3;UBE3B SH3 and multiple ankyrin repeat domains 2;enoyl CoA hydratase domain containing 2;SH3 and multiple ankyrin repeat domains 3;ubiquitin protein ligase E3B 633 80 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A8995.[MT7]-VLLFR.2b4_1.heavy 396.267 / 617.414 16735.0 33.807899475097656 50 20 10 10 10 8.903781657842105 11.231182866206504 0.0 3 0.9951049364426313 17.632174886149958 16735.0 83.40664266909741 0.0 - - - - - - - 289.0 33 4 SHANK2;ECHDC2;SHANK3;UBE3B SH3 and multiple ankyrin repeat domains 2;enoyl CoA hydratase domain containing 2;SH3 and multiple ankyrin repeat domains 3;ubiquitin protein ligase E3B 635 80 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A8995.[MT7]-VLLFR.2y3_1.heavy 396.267 / 435.271 38086.0 33.807899475097656 50 20 10 10 10 8.903781657842105 11.231182866206504 0.0 3 0.9951049364426313 17.632174886149958 38086.0 158.8574453233225 0.0 - - - - - - - 289.0 76 2 SHANK2;ECHDC2;SHANK3;UBE3B SH3 and multiple ankyrin repeat domains 2;enoyl CoA hydratase domain containing 2;SH3 and multiple ankyrin repeat domains 3;ubiquitin protein ligase E3B 637 81 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A69.[MT7]-LTVPC[CAM]R.2y4_1.heavy 445.256 / 531.271 18507.0 23.196399688720703 39 15 6 10 8 2.7302941104913723 36.626090799427814 0.0 4 0.9599901633349742 6.149222906176599 18507.0 19.063645027241666 1.0 - - - - - - - 675.1111111111111 62 9 PIAS3 protein inhibitor of activated STAT, 3 639 81 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A69.[MT7]-LTVPC[CAM]R.2b3_1.heavy 445.256 / 458.31 32042.0 23.196399688720703 39 15 6 10 8 2.7302941104913723 36.626090799427814 0.0 4 0.9599901633349742 6.149222906176599 32042.0 29.55592410227288 0.0 - - - - - - - 276.0 64 2 PIAS3 protein inhibitor of activated STAT, 3 641 81 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A69.[MT7]-LTVPC[CAM]R.2y5_1.heavy 445.256 / 632.318 76790.0 23.196399688720703 39 15 6 10 8 2.7302941104913723 36.626090799427814 0.0 4 0.9599901633349742 6.149222906176599 76790.0 52.910967941174285 1.0 - - - - - - - 1262.7142857142858 219 7 PIAS3 protein inhibitor of activated STAT, 3 643 81 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A69.[MT7]-LTVPC[CAM]R.2y3_1.heavy 445.256 / 432.202 41434.0 23.196399688720703 39 15 6 10 8 2.7302941104913723 36.626090799427814 0.0 4 0.9599901633349742 6.149222906176599 41434.0 33.402741986065266 0.0 - - - - - - - 631.1428571428571 82 7 PIAS3 protein inhibitor of activated STAT, 3 645 82 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9334.[MT7]-SLC[CAM]AAELVC[CAM]K[MT7].2b3_1.heavy 719.885 / 505.256 7000.0 28.491999626159668 31 18 0 5 8 6.8794814966557105 14.535979208405823 0.04879951477050781 4 0.9888593997291641 11.681646397154033 7000.0 23.818918918918918 0.0 - - - - - - - 333.0 14 4 FBXW11;BTRC F-box and WD repeat domain containing 11;beta-transducin repeat containing 647 82 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9334.[MT7]-SLC[CAM]AAELVC[CAM]K[MT7].2b4_1.heavy 719.885 / 576.293 7667.0 28.491999626159668 31 18 0 5 8 6.8794814966557105 14.535979208405823 0.04879951477050781 4 0.9888593997291641 11.681646397154033 7667.0 6.709631545386346 1.0 - - - - - - - 333.0 59 4 FBXW11;BTRC F-box and WD repeat domain containing 11;beta-transducin repeat containing 649 82 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9334.[MT7]-SLC[CAM]AAELVC[CAM]K[MT7].2b6_1.heavy 719.885 / 776.373 6667.0 28.491999626159668 31 18 0 5 8 6.8794814966557105 14.535979208405823 0.04879951477050781 4 0.9888593997291641 11.681646397154033 6667.0 21.219280629955293 0.0 - - - - - - - 333.0 13 2 FBXW11;BTRC F-box and WD repeat domain containing 11;beta-transducin repeat containing 651 82 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9334.[MT7]-SLC[CAM]AAELVC[CAM]K[MT7].2y3_1.heavy 719.885 / 550.314 6000.0 28.491999626159668 31 18 0 5 8 6.8794814966557105 14.535979208405823 0.04879951477050781 4 0.9888593997291641 11.681646397154033 6000.0 20.752606235509656 0.0 - - - - - - - 333.0 12 5 FBXW11;BTRC F-box and WD repeat domain containing 11;beta-transducin repeat containing 653 83 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9335.[MT7]-VVEGFTDEEK[MT7].2y8_1.heavy 720.877 / 1098.51 12769.0 26.116899490356445 39 14 10 5 10 1.621586970378338 43.79284095092555 0.045200347900390625 3 0.9484038069740419 5.409639103540451 12769.0 43.03032915360501 0.0 - - - - - - - 319.0 25 6 UBE3C ubiquitin protein ligase E3C 655 83 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9335.[MT7]-VVEGFTDEEK[MT7].2y9_1.heavy 720.877 / 1197.58 14684.0 26.116899490356445 39 14 10 5 10 1.621586970378338 43.79284095092555 0.045200347900390625 3 0.9484038069740419 5.409639103540451 14684.0 4.403134796238244 1.0 - - - - - - - 319.0 29 5 UBE3C ubiquitin protein ligase E3C 657 83 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9335.[MT7]-VVEGFTDEEK[MT7].2y3_1.heavy 720.877 / 549.3 19473.0 26.116899490356445 39 14 10 5 10 1.621586970378338 43.79284095092555 0.045200347900390625 3 0.9484038069740419 5.409639103540451 19473.0 64.87367410742462 0.0 - - - - - - - 319.0 38 3 UBE3C ubiquitin protein ligase E3C 659 83 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9335.[MT7]-VVEGFTDEEK[MT7].2y7_1.heavy 720.877 / 969.465 20111.0 26.116899490356445 39 14 10 5 10 1.621586970378338 43.79284095092555 0.045200347900390625 3 0.9484038069740419 5.409639103540451 20111.0 81.89400940438871 0.0 - - - - - - - 319.0 40 2 UBE3C ubiquitin protein ligase E3C 661 84 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A67.[MT7]-NELLGAGIEK[MT7].3b4_1.heavy 444.597 / 614.363 17667.0 28.467599868774414 45 15 10 10 10 3.506498609812166 28.518477012987248 0.0 3 0.9555358470276434 5.830890229155281 17667.0 60.46889119473403 0.0 - - - - - - - 333.0 35 1 FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 663 84 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A67.[MT7]-NELLGAGIEK[MT7].3b5_1.heavy 444.597 / 671.385 43000.0 28.467599868774414 45 15 10 10 10 3.506498609812166 28.518477012987248 0.0 3 0.9555358470276434 5.830890229155281 43000.0 55.47342144474331 0.0 - - - - - - - 333.0 86 2 FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 665 84 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A67.[MT7]-NELLGAGIEK[MT7].3y4_1.heavy 444.597 / 590.363 N/A 28.467599868774414 45 15 10 10 10 3.506498609812166 28.518477012987248 0.0 3 0.9555358470276434 5.830890229155281 33667.0 32.86001588018412 1.0 - - - - - - - 333.0 87 3 FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 667 84 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A67.[MT7]-NELLGAGIEK[MT7].3b3_1.heavy 444.597 / 501.279 56000.0 28.467599868774414 45 15 10 10 10 3.506498609812166 28.518477012987248 0.0 3 0.9555358470276434 5.830890229155281 56000.0 47.03395320935813 0.0 - - - - - - - 333.0 112 1 FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 669 85 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A8990.[MT7]-ISSGK[MT7].2y4_1.heavy 390.247 / 522.3 74955.0 15.577400207519531 39 15 10 10 4 1.8289056829139438 44.877569676629165 0.0 7 0.9516915503009055 5.592252659066392 74955.0 79.36800195463815 0.0 - - - - - - - 362.0 149 1 DET1;KIAA1712;SDPR de-etiolated homolog 1 (Arabidopsis);KIAA1712;serum deprivation response 671 85 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A8990.[MT7]-ISSGK[MT7].2y3_1.heavy 390.247 / 435.268 13036.0 15.577400207519531 39 15 10 10 4 1.8289056829139438 44.877569676629165 0.0 7 0.9516915503009055 5.592252659066392 13036.0 22.635516969218628 0.0 - - - - - - - 281.55555555555554 26 9 DET1;KIAA1712;SDPR de-etiolated homolog 1 (Arabidopsis);KIAA1712;serum deprivation response 673 85 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A8990.[MT7]-ISSGK[MT7].2y2_1.heavy 390.247 / 348.236 8509.0 15.577400207519531 39 15 10 10 4 1.8289056829139438 44.877569676629165 0.0 7 0.9516915503009055 5.592252659066392 8509.0 7.092371904752864 6.0 - - - - - - - 859.75 150 4 DET1;KIAA1712;SDPR de-etiolated homolog 1 (Arabidopsis);KIAA1712;serum deprivation response 675 85 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A8990.[MT7]-ISSGK[MT7].2y1_1.heavy 390.247 / 291.215 N/A 15.577400207519531 39 15 10 10 4 1.8289056829139438 44.877569676629165 0.0 7 0.9516915503009055 5.592252659066392 9777.0 1.2163484680536942 26.0 - - - - - - - 2897.0 91 3 DET1;KIAA1712;SDPR de-etiolated homolog 1 (Arabidopsis);KIAA1712;serum deprivation response 677 86 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A68.[MT7]-LAQQIANC[CAM]K[MT7].3y3_1.heavy 445.255 / 565.288 14416.0 24.07110023498535 48 18 10 10 10 4.7459245519922115 21.070710017508112 0.0 3 0.9824897653670253 9.312807505018846 14416.0 59.18060084802929 1.0 - - - - - - - 288.0 28 4 MID1 midline 1 (Opitz/BBB syndrome) 679 86 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A68.[MT7]-LAQQIANC[CAM]K[MT7].3b4_1.heavy 445.255 / 585.348 22201.0 24.07110023498535 48 18 10 10 10 4.7459245519922115 21.070710017508112 0.0 3 0.9824897653670253 9.312807505018846 22201.0 44.402 0.0 - - - - - - - 700.4285714285714 44 7 MID1 midline 1 (Opitz/BBB syndrome) 681 86 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A68.[MT7]-LAQQIANC[CAM]K[MT7].3y4_1.heavy 445.255 / 636.326 13551.0 24.07110023498535 48 18 10 10 10 4.7459245519922115 21.070710017508112 0.0 3 0.9824897653670253 9.312807505018846 13551.0 23.11025362337005 0.0 - - - - - - - 288.0 27 8 MID1 midline 1 (Opitz/BBB syndrome) 683 86 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A68.[MT7]-LAQQIANC[CAM]K[MT7].3b3_1.heavy 445.255 / 457.289 13263.0 24.07110023498535 48 18 10 10 10 4.7459245519922115 21.070710017508112 0.0 3 0.9824897653670253 9.312807505018846 13263.0 24.48950417943696 0.0 - - - - - - - 288.0 26 3 MID1 midline 1 (Opitz/BBB syndrome) 685 87 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A65.[MT7]-GFFTIR.2y4_1.heavy 442.759 / 536.319 6900.0 33.78369903564453 38 13 10 5 10 1.265022455946611 48.70223990848813 0.04840087890625 3 0.9244987203414569 4.4628686123105155 6900.0 19.183828505214368 0.0 - - - - - - - 288.0 13 1 UBE3B ubiquitin protein ligase E3B 687 87 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A65.[MT7]-GFFTIR.2b3_1.heavy 442.759 / 496.268 12651.0 33.78369903564453 38 13 10 5 10 1.265022455946611 48.70223990848813 0.04840087890625 3 0.9244987203414569 4.4628686123105155 12651.0 62.41312789855072 0.0 - - - - - - - 288.0 25 4 UBE3B ubiquitin protein ligase E3B 689 87 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A65.[MT7]-GFFTIR.2y5_1.heavy 442.759 / 683.388 15239.0 33.78369903564453 38 13 10 5 10 1.265022455946611 48.70223990848813 0.04840087890625 3 0.9244987203414569 4.4628686123105155 15239.0 61.95168828502415 0.0 - - - - - - - 288.0 30 3 UBE3B ubiquitin protein ligase E3B 691 87 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A65.[MT7]-GFFTIR.2b4_1.heavy 442.759 / 597.315 13801.0 33.78369903564453 38 13 10 5 10 1.265022455946611 48.70223990848813 0.04840087890625 3 0.9244987203414569 4.4628686123105155 13801.0 67.60656533816424 0.0 - - - - - - - 288.0 27 5 UBE3B ubiquitin protein ligase E3B 693 88 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9330.[MT7]-SIIK[MT7]PEWIR.3b6_2.heavy 477.297 / 478.805 37333.0 30.28689956665039 39 14 10 5 10 1.1662813166170618 54.524838783173465 0.049800872802734375 3 0.9378172569095498 4.923238311775534 37333.0 63.84643168792198 0.0 - - - - - - - 333.0 74 1 UBE3B ubiquitin protein ligase E3B 695 88 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9330.[MT7]-SIIK[MT7]PEWIR.3y6_1.heavy 477.297 / 972.575 1333.0 30.28689956665039 39 14 10 5 10 1.1662813166170618 54.524838783173465 0.049800872802734375 3 0.9378172569095498 4.923238311775534 1333.0 4.201052626839733 0.0 - - - - - - - 333.0 2 1 UBE3B ubiquitin protein ligase E3B 697 88 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9330.[MT7]-SIIK[MT7]PEWIR.3y1_1.heavy 477.297 / 175.119 29333.0 30.28689956665039 39 14 10 5 10 1.1662813166170618 54.524838783173465 0.049800872802734375 3 0.9378172569095498 4.923238311775534 29333.0 16.340503899220156 1.0 - - - - - - - 333.0 58 1 UBE3B ubiquitin protein ligase E3B 699 88 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9330.[MT7]-SIIK[MT7]PEWIR.3y5_1.heavy 477.297 / 700.378 60667.0 30.28689956665039 39 14 10 5 10 1.1662813166170618 54.524838783173465 0.049800872802734375 3 0.9378172569095498 4.923238311775534 60667.0 217.67678608841396 0.0 - - - - - - - 333.0 121 2 UBE3B ubiquitin protein ligase E3B 701 89 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A66.[MT7]-TLQLLR.2y4_1.heavy 444.293 / 529.346 13667.0 30.212600708007812 42 12 10 10 10 0.8919152413958109 67.81472631552128 0.0 3 0.8867413194714435 3.6319493375033454 13667.0 32.85899232383808 0.0 - - - - - - - 333.0 27 5 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 703 89 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A66.[MT7]-TLQLLR.2b3_1.heavy 444.293 / 487.3 26667.0 30.212600708007812 42 12 10 10 10 0.8919152413958109 67.81472631552128 0.0 3 0.8867413194714435 3.6319493375033454 26667.0 63.05596935518195 0.0 - - - - - - - 333.0 53 6 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 705 89 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A66.[MT7]-TLQLLR.2y5_1.heavy 444.293 / 642.43 40667.0 30.212600708007812 42 12 10 10 10 0.8919152413958109 67.81472631552128 0.0 3 0.8867413194714435 3.6319493375033454 40667.0 72.56003306558193 0.0 - - - - - - - 333.0 81 1 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 707 89 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A66.[MT7]-TLQLLR.2b4_1.heavy 444.293 / 600.384 32667.0 30.212600708007812 42 12 10 10 10 0.8919152413958109 67.81472631552128 0.0 3 0.8867413194714435 3.6319493375033454 32667.0 125.86310612612611 0.0 - - - - - - - 333.0 65 2 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 709 90 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9331.[MT7]-AC[CAM]QEQIEAALR.2y8_1.heavy 716.87 / 929.505 15658.0 27.521099090576172 48 18 10 10 10 2.4377017901417943 28.330019514477325 0.0 3 0.9816549254714116 9.097801454977489 15658.0 65.82942942942942 0.0 - - - - - - - 333.0 31 6 CCND3 cyclin D3 711 90 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9331.[MT7]-AC[CAM]QEQIEAALR.2y10_1.heavy 716.87 / 1217.59 18656.0 27.521099090576172 48 18 10 10 10 2.4377017901417943 28.330019514477325 0.0 3 0.9816549254714116 9.097801454977489 18656.0 27.6043119399293 1.0 - - - - - - - 333.0 40 2 CCND3 cyclin D3 713 90 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9331.[MT7]-AC[CAM]QEQIEAALR.2b5_1.heavy 716.87 / 761.337 13659.0 27.521099090576172 48 18 10 10 10 2.4377017901417943 28.330019514477325 0.0 3 0.9816549254714116 9.097801454977489 13659.0 30.011516516516515 0.0 - - - - - - - 333.0 27 2 CCND3 cyclin D3 715 90 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9331.[MT7]-AC[CAM]QEQIEAALR.2y7_1.heavy 716.87 / 800.463 12660.0 27.521099090576172 48 18 10 10 10 2.4377017901417943 28.330019514477325 0.0 3 0.9816549254714116 9.097801454977489 12660.0 45.71003561701236 0.0 - - - - - - - 333.0 25 4 CCND3 cyclin D3 717 91 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9428.[MT7]-QSGSLPLSSLTHVLR.3b4_1.heavy 580.336 / 504.253 N/A 34.99340057373047 44 18 6 10 10 5.530705090328784 18.080877278172736 0.0 3 0.9896586077433416 12.125450552399379 15108.0 12.073544815584887 1.0 - - - - - - - 256.0 110 1 ORC2 origin recognition complex, subunit 2 719 91 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9428.[MT7]-QSGSLPLSSLTHVLR.3b5_1.heavy 580.336 / 617.338 33800.0 34.99340057373047 44 18 6 10 10 5.530705090328784 18.080877278172736 0.0 3 0.9896586077433416 12.125450552399379 33800.0 46.827083333333334 0.0 - - - - - - - 256.0 67 2 ORC2 origin recognition complex, subunit 2 721 91 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9428.[MT7]-QSGSLPLSSLTHVLR.3y8_1.heavy 580.336 / 912.526 18180.0 34.99340057373047 44 18 6 10 10 5.530705090328784 18.080877278172736 0.0 3 0.9896586077433416 12.125450552399379 18180.0 45.899765625 0.0 - - - - - - - 725.3333333333334 36 6 ORC2 origin recognition complex, subunit 2 723 91 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9428.[MT7]-QSGSLPLSSLTHVLR.3y5_1.heavy 580.336 / 625.378 14852.0 34.99340057373047 44 18 6 10 10 5.530705090328784 18.080877278172736 0.0 3 0.9896586077433416 12.125450552399379 14852.0 84.12265625 0.0 - - - - - - - 256.0 29 3 ORC2 origin recognition complex, subunit 2 725 92 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9234.[MT7]-VTEEAVAVK[MT7].2y8_1.heavy 617.368 / 990.559 88856.0 22.73150062561035 44 14 10 10 10 1.666961001919347 41.39922404094721 0.0 3 0.9488012318414161 5.43077770456166 88856.0 138.7863533988007 0.0 - - - - - - - 269.0 177 3 CHEK1 CHK1 checkpoint homolog (S. pombe) 727 92 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9234.[MT7]-VTEEAVAVK[MT7].2y5_1.heavy 617.368 / 631.426 41197.0 22.73150062561035 44 14 10 10 10 1.666961001919347 41.39922404094721 0.0 3 0.9488012318414161 5.43077770456166 41197.0 102.45332873876282 0.0 - - - - - - - 269.0 82 4 CHEK1 CHK1 checkpoint homolog (S. pombe) 729 92 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9234.[MT7]-VTEEAVAVK[MT7].2b4_1.heavy 617.368 / 603.311 56276.0 22.73150062561035 44 14 10 10 10 1.666961001919347 41.39922404094721 0.0 3 0.9488012318414161 5.43077770456166 56276.0 29.40890129522768 0.0 - - - - - - - 269.0 112 3 CHEK1 CHK1 checkpoint homolog (S. pombe) 731 92 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9234.[MT7]-VTEEAVAVK[MT7].2b5_1.heavy 617.368 / 674.348 53852.0 22.73150062561035 44 14 10 10 10 1.666961001919347 41.39922404094721 0.0 3 0.9488012318414161 5.43077770456166 53852.0 93.3079207920792 0.0 - - - - - - - 639.875 107 8 CHEK1 CHK1 checkpoint homolog (S. pombe) 733 93 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9426.[MT7]-SILDQLDWIVNK[MT7].3y3_1.heavy 578.001 / 504.326 48002.0 44.36409950256348 39 13 10 6 10 1.5576944558535426 54.40607246257249 0.032199859619140625 3 0.9273622339151761 4.551101858101692 48002.0 100.00355142678438 0.0 - - - - - - - 317.61538461538464 96 13 ORC2 origin recognition complex, subunit 2 735 93 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9426.[MT7]-SILDQLDWIVNK[MT7].3b4_1.heavy 578.001 / 573.336 14502.0 44.36409950256348 39 13 10 6 10 1.5576944558535426 54.40607246257249 0.032199859619140625 3 0.9273622339151761 4.551101858101692 14502.0 60.9951263557194 0.0 - - - - - - - 269.3333333333333 29 15 ORC2 origin recognition complex, subunit 2 737 93 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9426.[MT7]-SILDQLDWIVNK[MT7].3b5_1.heavy 578.001 / 701.395 12941.0 44.36409950256348 39 13 10 6 10 1.5576944558535426 54.40607246257249 0.032199859619140625 3 0.9273622339151761 4.551101858101692 12941.0 97.14373756071555 0.0 - - - - - - - 210.7058823529412 25 17 ORC2 origin recognition complex, subunit 2 739 93 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9426.[MT7]-SILDQLDWIVNK[MT7].3b7_1.heavy 578.001 / 929.506 24230.0 44.36409950256348 39 13 10 6 10 1.5576944558535426 54.40607246257249 0.032199859619140625 3 0.9273622339151761 4.551101858101692 24230.0 148.70945076527158 0.0 - - - - - - - 262.2857142857143 48 14 ORC2 origin recognition complex, subunit 2 741 94 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9427.[MT7]-ESQVSILQSLFGER.2y8_1.heavy 868.969 / 949.51 13031.0 43.619300842285156 42 12 10 10 10 0.9502149077545753 60.75640077103731 0.0 3 0.8924629324463181 3.729170948346681 13031.0 30.35507487520799 0.0 - - - - - - - 206.93333333333334 26 15 ORC5 origin recognition complex, subunit 5 743 94 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9427.[MT7]-ESQVSILQSLFGER.2b4_1.heavy 868.969 / 588.311 25862.0 43.619300842285156 42 12 10 10 10 0.9502149077545753 60.75640077103731 0.0 3 0.8924629324463181 3.729170948346681 25862.0 85.4882318420473 0.0 - - - - - - - 281.9375 51 16 ORC5 origin recognition complex, subunit 5 745 94 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9427.[MT7]-ESQVSILQSLFGER.2y10_1.heavy 868.969 / 1149.63 22755.0 43.619300842285156 42 12 10 10 10 0.9502149077545753 60.75640077103731 0.0 3 0.8924629324463181 3.729170948346681 22755.0 71.78322942643392 0.0 - - - - - - - 247.58823529411765 45 17 ORC5 origin recognition complex, subunit 5 747 94 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9427.[MT7]-ESQVSILQSLFGER.2y11_1.heavy 868.969 / 1248.69 9022.0 43.619300842285156 42 12 10 10 10 0.9502149077545753 60.75640077103731 0.0 3 0.8924629324463181 3.729170948346681 9022.0 36.5825365255029 0.0 - - - - - - - 180.26666666666668 18 15 ORC5 origin recognition complex, subunit 5 749 95 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9238.[MT7]-ITDFGLC[CAM]K[MT7].2y5_1.heavy 621.344 / 768.419 71000.0 30.92650032043457 48 18 10 10 10 6.62167838792383 15.101911349601824 0.0 3 0.9842323919015558 9.81538085412196 71000.0 59.995000000000005 0.0 - - - - - - - 333.0 142 1 AKT3;AKT1;AKT2 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 1;v-akt murine thymoma viral oncogene homolog 2 751 95 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9238.[MT7]-ITDFGLC[CAM]K[MT7].2y6_1.heavy 621.344 / 883.446 17333.0 30.92650032043457 48 18 10 10 10 6.62167838792383 15.101911349601824 0.0 3 0.9842323919015558 9.81538085412196 17333.0 49.63422788605697 0.0 - - - - - - - 333.0 34 5 AKT3;AKT1;AKT2 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 1;v-akt murine thymoma viral oncogene homolog 2 753 95 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9238.[MT7]-ITDFGLC[CAM]K[MT7].2b5_1.heavy 621.344 / 678.358 10000.0 30.92650032043457 48 18 10 10 10 6.62167838792383 15.101911349601824 0.0 3 0.9842323919015558 9.81538085412196 10000.0 36.729729729729726 0.0 - - - - - - - 333.0 20 3 AKT3;AKT1;AKT2 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 1;v-akt murine thymoma viral oncogene homolog 2 755 95 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9238.[MT7]-ITDFGLC[CAM]K[MT7].2y7_1.heavy 621.344 / 984.494 68667.0 30.92650032043457 48 18 10 10 10 6.62167838792383 15.101911349601824 0.0 3 0.9842323919015558 9.81538085412196 68667.0 92.00801312537493 0.0 - - - - - - - 333.0 137 2 AKT3;AKT1;AKT2 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 1;v-akt murine thymoma viral oncogene homolog 2 757 96 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9235.[MT7]-EATDEELER.2y8_1.heavy 618.297 / 962.443 29547.0 19.481700897216797 50 20 10 10 10 5.865891730517081 17.04770640067456 0.0 3 0.9919326982223658 13.731115492964225 29547.0 57.09315340909091 0.0 - - - - - - - 313.0 59 6 CUL4A cullin 4A 759 96 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9235.[MT7]-EATDEELER.2y5_1.heavy 618.297 / 675.331 22747.0 19.481700897216797 50 20 10 10 10 5.865891730517081 17.04770640067456 0.0 3 0.9919326982223658 13.731115492964225 22747.0 8.083511016346836 0.0 - - - - - - - 352.0 45 2 CUL4A cullin 4A 761 96 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9235.[MT7]-EATDEELER.2b4_1.heavy 618.297 / 561.264 22747.0 19.481700897216797 50 20 10 10 10 5.865891730517081 17.04770640067456 0.0 3 0.9919326982223658 13.731115492964225 22747.0 17.776380409949503 0.0 - - - - - - - 313.0 45 3 CUL4A cullin 4A 763 96 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9235.[MT7]-EATDEELER.2b6_1.heavy 618.297 / 819.349 14539.0 19.481700897216797 50 20 10 10 10 5.865891730517081 17.04770640067456 0.0 3 0.9919326982223658 13.731115492964225 14539.0 32.55 0.0 - - - - - - - 391.0 29 6 CUL4A cullin 4A 765 97 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9236.[MT7]-GAESVTEEK[MT7].2y4_1.heavy 619.329 / 650.348 7233.0 17.70039939880371 39 13 6 10 10 1.949628579065858 39.46381868074485 0.0 3 0.9157546599629512 4.221747648741445 7233.0 18.6658064516129 0.0 - - - - - - - 227.6 14 10 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 767 97 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9236.[MT7]-GAESVTEEK[MT7].2y8_1.heavy 619.329 / 1036.53 3100.0 17.70039939880371 39 13 6 10 10 1.949628579065858 39.46381868074485 0.0 3 0.9157546599629512 4.221747648741445 3100.0 17.238539729328235 1.0 - - - - - - - 248.2 6 5 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 769 97 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9236.[MT7]-GAESVTEEK[MT7].2y6_1.heavy 619.329 / 836.448 13020.0 17.70039939880371 39 13 6 10 10 1.949628579065858 39.46381868074485 0.0 3 0.9157546599629512 4.221747648741445 13020.0 85.92733971997052 0.0 - - - - - - - 268.8 26 10 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 771 97 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9236.[MT7]-GAESVTEEK[MT7].2y1_1.heavy 619.329 / 291.215 N/A 17.70039939880371 39 13 6 10 10 1.949628579065858 39.46381868074485 0.0 3 0.9157546599629512 4.221747648741445 9506.0 13.648381319676481 6.0 - - - - - - - 413.0 43 4 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 773 98 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9421.[MT7]-VTLVFEHVDQDLR.2y4_1.heavy 857.966 / 531.289 22749.0 34.72949981689453 47 17 10 10 10 6.621799564623746 15.101634989714771 0.0 3 0.9781764331331444 8.33885654268563 22749.0 52.20765452452491 0.0 - - - - - - - 261.0 45 6 CDK4 cyclin-dependent kinase 4 775 98 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9421.[MT7]-VTLVFEHVDQDLR.2b4_1.heavy 857.966 / 557.378 26933.0 34.72949981689453 47 17 10 10 10 6.621799564623746 15.101634989714771 0.0 3 0.9781764331331444 8.33885654268563 26933.0 23.499690442038016 1.0 - - - - - - - 261.0 57 6 CDK4 cyclin-dependent kinase 4 777 98 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9421.[MT7]-VTLVFEHVDQDLR.2y9_1.heavy 857.966 / 1158.55 34516.0 34.72949981689453 47 17 10 10 10 6.621799564623746 15.101634989714771 0.0 3 0.9781764331331444 8.33885654268563 34516.0 97.91677527607601 0.0 - - - - - - - 261.0 69 5 CDK4 cyclin-dependent kinase 4 779 98 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9421.[MT7]-VTLVFEHVDQDLR.2y7_1.heavy 857.966 / 882.443 14382.0 34.72949981689453 47 17 10 10 10 6.621799564623746 15.101634989714771 0.0 3 0.9781764331331444 8.33885654268563 14382.0 44.23838549186405 0.0 - - - - - - - 672.1428571428571 28 7 CDK4 cyclin-dependent kinase 4 781 99 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9420.[MT7]-FPIDYPYSPPAFR.3y6_1.heavy 571.963 / 674.362 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDC34 cell division cycle 34 homolog (S. cerevisiae) 783 99 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9420.[MT7]-FPIDYPYSPPAFR.3b4_1.heavy 571.963 / 617.341 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDC34 cell division cycle 34 homolog (S. cerevisiae) 785 99 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9420.[MT7]-FPIDYPYSPPAFR.3b5_1.heavy 571.963 / 780.405 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDC34 cell division cycle 34 homolog (S. cerevisiae) 787 99 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9420.[MT7]-FPIDYPYSPPAFR.3y5_1.heavy 571.963 / 587.33 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDC34 cell division cycle 34 homolog (S. cerevisiae) 789 100 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9422.[MT7]-NFPALLSTGEFLK[MT7].2b4_1.heavy 862.995 / 574.311 5957.0 40.285400390625 44 14 10 10 10 1.7006431706062783 47.10328699756748 0.0 3 0.935805943441141 4.844666238085661 5957.0 16.525011185682324 0.0 - - - - - - - 310.4166666666667 11 12 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 791 100 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9422.[MT7]-NFPALLSTGEFLK[MT7].2y3_1.heavy 862.995 / 551.367 5510.0 40.285400390625 44 14 10 10 10 1.7006431706062783 47.10328699756748 0.0 3 0.935805943441141 4.844666238085661 5510.0 13.805816554809843 0.0 - - - - - - - 344.5625 11 16 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 793 100 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9422.[MT7]-NFPALLSTGEFLK[MT7].2b5_1.heavy 862.995 / 687.395 9978.0 40.285400390625 44 14 10 10 10 1.7006431706062783 47.10328699756748 0.0 3 0.935805943441141 4.844666238085661 9978.0 38.09384139435024 0.0 - - - - - - - 298.0 19 7 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 795 100 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9422.[MT7]-NFPALLSTGEFLK[MT7].2y7_1.heavy 862.995 / 925.511 15637.0 40.285400390625 44 14 10 10 10 1.7006431706062783 47.10328699756748 0.0 3 0.935805943441141 4.844666238085661 15637.0 60.6064932885906 0.0 - - - - - - - 257.3636363636364 31 11 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 797 101 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9317.[MT7]-FFQYFDQLR.2y5_1.heavy 704.362 / 678.357 24378.0 40.58940124511719 47 17 10 10 10 2.84412622478554 28.092242959237794 0.0 3 0.9707898039334723 7.20331279995984 24378.0 56.5107614213198 0.0 - - - - - - - 1163.5 48 8 DET1 de-etiolated homolog 1 (Arabidopsis) 799 101 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9317.[MT7]-FFQYFDQLR.2b4_1.heavy 704.362 / 730.368 16548.0 40.58940124511719 47 17 10 10 10 2.84412622478554 28.092242959237794 0.0 3 0.9707898039334723 7.20331279995984 16548.0 40.20102841677943 0.0 - - - - - - - 246.22222222222223 33 9 DET1 de-etiolated homolog 1 (Arabidopsis) 801 101 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9317.[MT7]-FFQYFDQLR.2y6_1.heavy 704.362 / 841.42 26151.0 40.58940124511719 47 17 10 10 10 2.84412622478554 28.092242959237794 0.0 3 0.9707898039334723 7.20331279995984 26151.0 123.98719409790931 0.0 - - - - - - - 318.0 52 13 DET1 de-etiolated homolog 1 (Arabidopsis) 803 101 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9317.[MT7]-FFQYFDQLR.2y7_1.heavy 704.362 / 969.479 16252.0 40.58940124511719 47 17 10 10 10 2.84412622478554 28.092242959237794 0.0 3 0.9707898039334723 7.20331279995984 16252.0 58.86681196120895 0.0 - - - - - - - 268.54545454545456 32 11 DET1 de-etiolated homolog 1 (Arabidopsis) 805 102 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A80.[MT7]-QILQLR.2b3_1.heavy 457.799 / 499.336 10333.0 28.180200576782227 48 18 10 10 10 6.333165307549556 15.789892596170404 0.0 3 0.9890270443625008 11.770709249077262 10333.0 20.14392788605697 0.0 - - - - - - - 333.0 20 2 CDC23 cell division cycle 23 homolog (S. cerevisiae) 807 102 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A80.[MT7]-QILQLR.2y4_1.heavy 457.799 / 529.346 N/A 28.180200576782227 48 18 10 10 10 6.333165307549556 15.789892596170404 0.0 3 0.9890270443625008 11.770709249077262 9000.0 0.2984149087697241 2.0 - - - - - - - 333.0 26 3 CDC23 cell division cycle 23 homolog (S. cerevisiae) 809 102 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A80.[MT7]-QILQLR.2y5_1.heavy 457.799 / 642.43 22000.0 28.180200576782227 48 18 10 10 10 6.333165307549556 15.789892596170404 0.0 3 0.9890270443625008 11.770709249077262 22000.0 42.88350824587706 0.0 - - - - - - - 333.0 44 2 CDC23 cell division cycle 23 homolog (S. cerevisiae) 811 102 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A80.[MT7]-QILQLR.2b4_1.heavy 457.799 / 627.395 9333.0 28.180200576782227 48 18 10 10 10 6.333165307549556 15.789892596170404 0.0 3 0.9890270443625008 11.770709249077262 9333.0 33.05172251711982 0.0 - - - - - - - 333.0 18 4 CDC23 cell division cycle 23 homolog (S. cerevisiae) 813 103 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A8999.[MT7]-GTFGK[MT7].2y4_1.heavy 399.242 / 596.352 39317.0 18.643999099731445 34 14 2 10 8 2.1019093951322345 42.41183273433781 0.0 4 0.9480990673550909 5.393594575109444 39317.0 144.04426426426426 0.0 - - - - - - - 305.25 78 8 AKT3;AKT1;AKT2 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 1;v-akt murine thymoma viral oncogene homolog 2 815 103 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A8999.[MT7]-GTFGK[MT7].2b4_1.heavy 399.242 / 507.268 8663.0 18.643999099731445 34 14 2 10 8 2.1019093951322345 42.41183273433781 0.0 4 0.9480990673550909 5.393594575109444 8663.0 10.721002607792997 1.0 - - - - - - - 320.6666666666667 24 9 AKT3;AKT1;AKT2 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 1;v-akt murine thymoma viral oncogene homolog 2 817 103 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A8999.[MT7]-GTFGK[MT7].2y3_1.heavy 399.242 / 495.305 34430.0 18.643999099731445 34 14 2 10 8 2.1019093951322345 42.41183273433781 0.0 4 0.9480990673550909 5.393594575109444 34430.0 28.287141303580764 0.0 - - - - - - - 388.5 68 8 AKT3;AKT1;AKT2 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 1;v-akt murine thymoma viral oncogene homolog 2 819 103 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A8999.[MT7]-GTFGK[MT7].2y2_1.heavy 399.242 / 348.236 41760.0 18.643999099731445 34 14 2 10 8 2.1019093951322345 42.41183273433781 0.0 4 0.9480990673550909 5.393594575109444 41760.0 46.366258556821165 1.0 - - - - - - - 333.0 174 4 AKT3;AKT1;AKT2 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 1;v-akt murine thymoma viral oncogene homolog 2 821 104 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A82.[MT7]-SPIAPC[CAM]SLDK[MT7].3y3_1.heavy 459.255 / 519.326 5143.0 24.909799575805664 33 18 2 5 8 7.133592081387908 14.018183105942898 0.044399261474609375 4 0.9892543867686974 11.894798850138066 5143.0 6.507719681799979 0.0 - - - - - - - 756.5 10 8 CDC25B cell division cycle 25 homolog B (S. pombe) 823 104 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A82.[MT7]-SPIAPC[CAM]SLDK[MT7].3b4_1.heavy 459.255 / 513.315 20271.0 24.909799575805664 33 18 2 5 8 7.133592081387908 14.018183105942898 0.044399261474609375 4 0.9892543867686974 11.894798850138066 20271.0 24.481054105307518 1.0 - - - - - - - 303.0 84 2 CDC25B cell division cycle 25 homolog B (S. pombe) 825 104 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A82.[MT7]-SPIAPC[CAM]SLDK[MT7].3y4_1.heavy 459.255 / 606.358 8774.0 24.909799575805664 33 18 2 5 8 7.133592081387908 14.018183105942898 0.044399261474609375 4 0.9892543867686974 11.894798850138066 8774.0 20.303471074380166 0.0 - - - - - - - 303.0 17 2 CDC25B cell division cycle 25 homolog B (S. pombe) 827 104 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A82.[MT7]-SPIAPC[CAM]SLDK[MT7].3y5_1.heavy 459.255 / 766.389 3631.0 24.909799575805664 33 18 2 5 8 7.133592081387908 14.018183105942898 0.044399261474609375 4 0.9892543867686974 11.894798850138066 3631.0 16.425315713389523 0.0 - - - - - - - 303.0 7 5 CDC25B cell division cycle 25 homolog B (S. pombe) 829 105 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A8998.[MT7]-NVVYR.2b3_1.heavy 397.736 / 457.289 49079.0 18.548200607299805 48 20 10 10 8 6.145392644647853 16.272353254285882 0.0 4 0.9947655649159275 17.050528229557486 49079.0 88.77525 0.0 - - - - - - - 284.14285714285717 98 7 AKT1 v-akt murine thymoma viral oncogene homolog 1 831 105 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A8998.[MT7]-NVVYR.2y4_1.heavy 397.736 / 536.319 55048.0 18.548200607299805 48 20 10 10 8 6.145392644647853 16.272353254285882 0.0 4 0.9947655649159275 17.050528229557486 55048.0 106.73333936651582 0.0 - - - - - - - 221.0 110 5 AKT1 v-akt murine thymoma viral oncogene homolog 1 833 105 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A8998.[MT7]-NVVYR.2b4_1.heavy 397.736 / 620.352 10612.0 18.548200607299805 48 20 10 10 8 6.145392644647853 16.272353254285882 0.0 4 0.9947655649159275 17.050528229557486 10612.0 46.201570904606385 2.0 - - - - - - - 309.4 38 5 AKT1 v-akt murine thymoma viral oncogene homolog 1 835 105 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A8998.[MT7]-NVVYR.2y3_1.heavy 397.736 / 437.251 18571.0 18.548200607299805 48 20 10 10 8 6.145392644647853 16.272353254285882 0.0 4 0.9947655649159275 17.050528229557486 18571.0 98.73721719457012 1.0 - - - - - - - 331.5 80 6 AKT1 v-akt murine thymoma viral oncogene homolog 1 837 106 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9318.[MT7]-ESVSVLNLFTR.2y8_1.heavy 704.899 / 949.547 49455.0 40.58940124511719 48 18 10 10 10 3.579233203443544 27.93894510807259 0.0 3 0.9840254611357367 9.751431315037113 49455.0 32.33976820013996 0.0 - - - - - - - 748.6666666666666 98 9 FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 839 106 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9318.[MT7]-ESVSVLNLFTR.2y9_1.heavy 704.899 / 1048.61 9748.0 40.58940124511719 48 18 10 10 10 3.579233203443544 27.93894510807259 0.0 3 0.9840254611357367 9.751431315037113 9748.0 32.99143520435082 0.0 - - - - - - - 264.53846153846155 19 13 FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 841 106 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9318.[MT7]-ESVSVLNLFTR.2y6_1.heavy 704.899 / 763.446 21932.0 40.58940124511719 48 18 10 10 10 3.579233203443544 27.93894510807259 0.0 3 0.9840254611357367 9.751431315037113 21932.0 37.10199278197928 0.0 - - - - - - - 757.5714285714286 43 7 FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 843 106 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9318.[MT7]-ESVSVLNLFTR.2y10_1.heavy 704.899 / 1135.65 36697.0 40.58940124511719 48 18 10 10 10 3.579233203443544 27.93894510807259 0.0 3 0.9840254611357367 9.751431315037113 36697.0 70.43309915175129 0.0 - - - - - - - 272.4 73 10 FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 845 107 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9323.[MT7]-IPFADALDLFR.2y8_1.heavy 711.399 / 920.484 36126.0 47.259849548339844 44 18 10 6 10 4.704901108076451 21.25443185794907 0.0334014892578125 3 0.9885691782844093 11.53211804408416 36126.0 154.95271858714534 0.0 - - - - - - - 153.66666666666666 72 9 PRIM2 primase, DNA, polypeptide 2 (58kDa) 847 107 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9323.[MT7]-IPFADALDLFR.2y9_1.heavy 711.399 / 1067.55 23561.0 47.259849548339844 44 18 10 6 10 4.704901108076451 21.25443185794907 0.0334014892578125 3 0.9885691782844093 11.53211804408416 23561.0 133.43232956148768 0.0 - - - - - - - 227.625 47 8 PRIM2 primase, DNA, polypeptide 2 (58kDa) 849 107 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9323.[MT7]-IPFADALDLFR.2y6_1.heavy 711.399 / 734.42 56608.0 47.259849548339844 44 18 10 6 10 4.704901108076451 21.25443185794907 0.0334014892578125 3 0.9885691782844093 11.53211804408416 56608.0 255.9803162436758 0.0 - - - - - - - 180.5 113 8 PRIM2 primase, DNA, polypeptide 2 (58kDa) 851 107 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9323.[MT7]-IPFADALDLFR.2y10_1.heavy 711.399 / 1164.6 334310.0 47.259849548339844 44 18 10 6 10 4.704901108076451 21.25443185794907 0.0334014892578125 3 0.9885691782844093 11.53211804408416 334310.0 2681.183719439572 0.0 - - - - - - - 172.75 668 4 PRIM2 primase, DNA, polypeptide 2 (58kDa) 853 108 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9325.[MT7]-VVLASSSPVFK[MT7].2y4_1.heavy 711.434 / 634.404 32000.0 30.67060089111328 44 14 10 10 10 1.5951629998603425 43.80259186728185 0.0 3 0.944956505102151 5.2359665743757065 32000.0 52.00564141035259 0.0 - - - - - - - 333.0 64 5 KEAP1 kelch-like ECH-associated protein 1 855 108 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9325.[MT7]-VVLASSSPVFK[MT7].2y8_1.heavy 711.434 / 966.538 38667.0 30.67060089111328 44 14 10 10 10 1.5951629998603425 43.80259186728185 0.0 3 0.944956505102151 5.2359665743757065 38667.0 69.86078276384868 0.0 - - - - - - - 333.0 77 1 KEAP1 kelch-like ECH-associated protein 1 857 108 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9325.[MT7]-VVLASSSPVFK[MT7].2y9_1.heavy 711.434 / 1079.62 26333.0 30.67060089111328 44 14 10 10 10 1.5951629998603425 43.80259186728185 0.0 3 0.944956505102151 5.2359665743757065 26333.0 83.80948030213777 0.0 - - - - - - - 333.0 52 4 KEAP1 kelch-like ECH-associated protein 1 859 108 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9325.[MT7]-VVLASSSPVFK[MT7].2y7_1.heavy 711.434 / 895.5 38000.0 30.67060089111328 44 14 10 10 10 1.5951629998603425 43.80259186728185 0.0 3 0.944956505102151 5.2359665743757065 38000.0 65.52215455826642 0.0 - - - - - - - 333.0 76 1 KEAP1 kelch-like ECH-associated protein 1 861 109 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A76.[MT7]-QLTAGTLLQK[MT7].3b6_1.heavy 454.285 / 716.406 25000.0 29.41659927368164 45 15 10 10 10 3.0886521798999858 32.376581814802506 0.0 3 0.9575217183210416 5.966634635231481 25000.0 87.0735701943504 0.0 - - - - - - - 333.0 50 6 PIAS3 protein inhibitor of activated STAT, 3 863 109 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A76.[MT7]-QLTAGTLLQK[MT7].3y3_1.heavy 454.285 / 532.357 60333.0 29.41659927368164 45 15 10 10 10 3.0886521798999858 32.376581814802506 0.0 3 0.9575217183210416 5.966634635231481 60333.0 57.88700132076223 0.0 - - - - - - - 333.0 120 2 PIAS3 protein inhibitor of activated STAT, 3 865 109 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A76.[MT7]-QLTAGTLLQK[MT7].3b4_1.heavy 454.285 / 558.337 20667.0 29.41659927368164 45 15 10 10 10 3.0886521798999858 32.376581814802506 0.0 3 0.9575217183210416 5.966634635231481 20667.0 59.18136431784109 0.0 - - - - - - - 333.0 41 6 PIAS3 protein inhibitor of activated STAT, 3 867 109 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A76.[MT7]-QLTAGTLLQK[MT7].3b5_1.heavy 454.285 / 615.358 28333.0 29.41659927368164 45 15 10 10 10 3.0886521798999858 32.376581814802506 0.0 3 0.9575217183210416 5.966634635231481 28333.0 159.95807807807807 0.0 - - - - - - - 333.0 56 3 PIAS3 protein inhibitor of activated STAT, 3 869 110 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9320.[MT7]-TTPATGEQSPGAR.2y8_1.heavy 708.864 / 801.385 6543.0 15.445899963378906 50 20 10 10 10 12.926057586960546 7.736310884215561 0.0 3 0.9955741942759909 18.544105582255547 6543.0 25.876271186440675 0.0 - - - - - - - 227.57142857142858 13 7 WWP2 WW domain containing E3 ubiquitin protein ligase 2 871 110 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9320.[MT7]-TTPATGEQSPGAR.2y9_1.heavy 708.864 / 902.433 6190.0 15.445899963378906 50 20 10 10 10 12.926057586960546 7.736310884215561 0.0 3 0.9955741942759909 18.544105582255547 6190.0 67.4954802259887 0.0 - - - - - - - 265.5 12 2 WWP2 WW domain containing E3 ubiquitin protein ligase 2 873 110 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9320.[MT7]-TTPATGEQSPGAR.2y10_1.heavy 708.864 / 973.47 3360.0 15.445899963378906 50 20 10 10 10 12.926057586960546 7.736310884215561 0.0 3 0.9955741942759909 18.544105582255547 3360.0 -0.3999999999999999 2.0 - - - - - - - 884.0 6 1 WWP2 WW domain containing E3 ubiquitin protein ligase 2 875 110 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9320.[MT7]-TTPATGEQSPGAR.2y11_1.heavy 708.864 / 1070.52 32716.0 15.445899963378906 50 20 10 10 10 12.926057586960546 7.736310884215561 0.0 3 0.9955741942759909 18.544105582255547 32716.0 369.6723163841808 0.0 - - - - - - - 177.0 65 6 WWP2 WW domain containing E3 ubiquitin protein ligase 2 877 111 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9321.[MT7]-IQELQASQEAR.2b3_1.heavy 708.882 / 515.295 34559.0 23.196399688720703 43 13 10 10 10 1.6046340580925225 49.94200760596384 0.0 3 0.9094657996086707 4.070274605237591 34559.0 127.23525012342833 0.0 - - - - - - - 274.0 69 6 MAD1L1 MAD1 mitotic arrest deficient-like 1 (yeast) 879 111 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9321.[MT7]-IQELQASQEAR.2y8_1.heavy 708.882 / 902.469 31817.0 23.196399688720703 43 13 10 10 10 1.6046340580925225 49.94200760596384 0.0 3 0.9094657996086707 4.070274605237591 31817.0 54.1307420768671 0.0 - - - - - - - 274.0 63 3 MAD1L1 MAD1 mitotic arrest deficient-like 1 (yeast) 881 111 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9321.[MT7]-IQELQASQEAR.2y9_1.heavy 708.882 / 1031.51 29897.0 23.196399688720703 43 13 10 10 10 1.6046340580925225 49.94200760596384 0.0 3 0.9094657996086707 4.070274605237591 29897.0 24.012806627176996 0.0 - - - - - - - 274.0 59 2 MAD1L1 MAD1 mitotic arrest deficient-like 1 (yeast) 883 111 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9321.[MT7]-IQELQASQEAR.2y10_1.heavy 708.882 / 1159.57 31817.0 23.196399688720703 43 13 10 10 10 1.6046340580925225 49.94200760596384 0.0 3 0.9094657996086707 4.070274605237591 31817.0 129.23654477565609 0.0 - - - - - - - 274.0 63 6 MAD1L1 MAD1 mitotic arrest deficient-like 1 (yeast) 885 112 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9322.[MT7]-ELLESLPLSK[MT7].2b3_1.heavy 708.931 / 500.32 7699.0 35.252498626708984 48 18 10 10 10 1.820792713923907 40.96216408150389 0.0 3 0.9865591257711119 10.633126155364742 7699.0 18.125965668191334 0.0 - - - - - - - 331.0 15 6 CDC16 cell division cycle 16 homolog (S. cerevisiae) 887 112 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9322.[MT7]-ELLESLPLSK[MT7].2y4_1.heavy 708.931 / 588.384 42719.0 35.252498626708984 48 18 10 10 10 1.820792713923907 40.96216408150389 0.0 3 0.9865591257711119 10.633126155364742 42719.0 81.42413422818791 0.0 - - - - - - - 447.2 85 5 CDC16 cell division cycle 16 homolog (S. cerevisiae) 889 112 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9322.[MT7]-ELLESLPLSK[MT7].2y6_1.heavy 708.931 / 788.5 12170.0 35.252498626708984 48 18 10 10 10 1.820792713923907 40.96216408150389 0.0 3 0.9865591257711119 10.633126155364742 12170.0 22.86769423640156 0.0 - - - - - - - 372.5 24 6 CDC16 cell division cycle 16 homolog (S. cerevisiae) 891 112 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9322.[MT7]-ELLESLPLSK[MT7].2b5_1.heavy 708.931 / 716.395 5464.0 35.252498626708984 48 18 10 10 10 1.820792713923907 40.96216408150389 0.0 3 0.9865591257711119 10.633126155364742 5464.0 -0.33798140380833575 2.0 - - - - - - - 358.6666666666667 14 9 CDC16 cell division cycle 16 homolog (S. cerevisiae) 893 113 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9416.[MT7]-LFSLPAQPLWNNR.3b6_1.heavy 567.318 / 773.468 6929.0 40.13249969482422 50 20 10 10 10 26.541563715265944 3.767675524802741 0.0 3 0.999679194672057 68.90170558564694 6929.0 32.13929041836944 0.0 - - - - - - - 226.1 13 10 RAD21 RAD21 homolog (S. pombe) 895 113 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9416.[MT7]-LFSLPAQPLWNNR.3y6_1.heavy 567.318 / 799.421 70796.0 40.13249969482422 50 20 10 10 10 26.541563715265944 3.767675524802741 0.0 3 0.999679194672057 68.90170558564694 70796.0 118.28133268245057 0.0 - - - - - - - 236.71428571428572 141 7 RAD21 RAD21 homolog (S. pombe) 897 113 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9416.[MT7]-LFSLPAQPLWNNR.3b4_1.heavy 567.318 / 605.378 32687.0 40.13249969482422 50 20 10 10 10 26.541563715265944 3.767675524802741 0.0 3 0.999679194672057 68.90170558564694 32687.0 33.08474004424779 0.0 - - - - - - - 318.0 65 9 RAD21 RAD21 homolog (S. pombe) 899 113 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9416.[MT7]-LFSLPAQPLWNNR.3y4_1.heavy 567.318 / 589.284 29373.0 40.13249969482422 50 20 10 10 10 26.541563715265944 3.767675524802741 0.0 3 0.999679194672057 68.90170558564694 29373.0 42.65249091176146 0.0 - - - - - - - 328.6363636363636 58 11 RAD21 RAD21 homolog (S. pombe) 901 114 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9222.[MT7]-DAESFLLK[MT7].2y5_1.heavy 605.85 / 751.483 36499.0 32.28754997253418 38 13 10 5 10 1.311371245654057 47.46845144281754 0.047702789306640625 3 0.9165827116750657 4.2429518416225696 36499.0 52.59304724409449 0.0 - - - - - - - 317.0 72 3 CDC25B cell division cycle 25 homolog B (S. pombe) 903 114 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9222.[MT7]-DAESFLLK[MT7].2b4_1.heavy 605.85 / 547.248 17773.0 32.28754997253418 38 13 10 5 10 1.311371245654057 47.46845144281754 0.047702789306640625 3 0.9165827116750657 4.2429518416225696 17773.0 75.64970019126159 0.0 - - - - - - - 317.0 35 4 CDC25B cell division cycle 25 homolog B (S. pombe) 905 114 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9222.[MT7]-DAESFLLK[MT7].2y3_1.heavy 605.85 / 517.383 16504.0 32.28754997253418 38 13 10 5 10 1.311371245654057 47.46845144281754 0.047702789306640625 3 0.9165827116750657 4.2429518416225696 16504.0 13.260582449001202 0.0 - - - - - - - 317.0 33 1 CDC25B cell division cycle 25 homolog B (S. pombe) 907 114 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9222.[MT7]-DAESFLLK[MT7].2b5_1.heavy 605.85 / 694.316 12695.0 32.28754997253418 38 13 10 5 10 1.311371245654057 47.46845144281754 0.047702789306640625 3 0.9165827116750657 4.2429518416225696 12695.0 19.280641500694763 0.0 - - - - - - - 317.0 25 1 CDC25B cell division cycle 25 homolog B (S. pombe) 909 115 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9417.[MT7]-LLYAIEC[CAM]AAGFELS.2b3_1.heavy 850.938 / 534.341 13050.0 49.48800086975098 41 15 10 6 10 2.3062516981175416 35.64127949870567 0.03119659423828125 3 0.9546563067167433 5.773631560204638 13050.0 61.875465961292264 0.0 - - - - - - - 662.875 26 8 UBE3C ubiquitin protein ligase E3C 911 115 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9417.[MT7]-LLYAIEC[CAM]AAGFELS.2b4_1.heavy 850.938 / 605.378 26431.0 49.48800086975098 41 15 10 6 10 2.3062516981175416 35.64127949870567 0.03119659423828125 3 0.9546563067167433 5.773631560204638 26431.0 79.99065130312893 0.0 - - - - - - - 271.2 52 10 UBE3C ubiquitin protein ligase E3C 913 115 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9417.[MT7]-LLYAIEC[CAM]AAGFELS.2b7_1.heavy 850.938 / 1007.54 8017.0 49.48800086975098 41 15 10 6 10 2.3062516981175416 35.64127949870567 0.03119659423828125 3 0.9546563067167433 5.773631560204638 8017.0 25.499129066912218 0.0 - - - - - - - 241.11111111111111 16 18 UBE3C ubiquitin protein ligase E3C 915 115 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9417.[MT7]-LLYAIEC[CAM]AAGFELS.2b5_1.heavy 850.938 / 718.462 22212.0 49.48800086975098 41 15 10 6 10 2.3062516981175416 35.64127949870567 0.03119659423828125 3 0.9546563067167433 5.773631560204638 22212.0 132.7862958039961 0.0 - - - - - - - 120.66666666666667 44 12 UBE3C ubiquitin protein ligase E3C 917 116 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 EFTU1_ECO24.FESEVYILSK.2y8.peptide 607.82 / 938.52 2333630.0 31.58810043334961 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 2333630.0 115.8816557722838 0.0 - - - - - - - 15886.0 4667 1 919 116 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 EFTU1_ECO24.FESEVYILSK.2y6.peptide 607.82 / 722.44 775162.0 31.58810043334961 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 775162.0 121.06823981238996 0.0 - - - - - - - 4634.0 1550 2 921 116 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 EFTU1_ECO24.FESEVYILSK.2y5.peptide 607.82 / 623.38 1007490.0 31.58810043334961 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 1007490.0 124.74054076457026 0.0 - - - - - - - 5295.0 2014 1 923 117 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9418.[MT7]-ESFESQFLADTER.2b4_1.heavy 851.906 / 637.295 8891.0 34.860599517822266 45 15 10 10 10 2.5134370888843742 39.786155954429105 0.0 3 0.9515065008176402 5.581484910769143 8891.0 34.03908045977012 0.0 - - - - - - - 261.0 17 8 CUL1 cullin 1 925 117 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9418.[MT7]-ESFESQFLADTER.2y10_1.heavy 851.906 / 1195.56 3922.0 34.860599517822266 45 15 10 10 10 2.5134370888843742 39.786155954429105 0.0 3 0.9515065008176402 5.581484910769143 3922.0 22.840766283524903 0.0 - - - - - - - 261.0 7 5 CUL1 cullin 1 927 117 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9418.[MT7]-ESFESQFLADTER.2b5_1.heavy 851.906 / 724.327 3138.0 34.860599517822266 45 15 10 10 10 2.5134370888843742 39.786155954429105 0.0 3 0.9515065008176402 5.581484910769143 3138.0 7.921530612244899 1.0 - - - - - - - 672.1428571428571 6 7 CUL1 cullin 1 929 117 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9418.[MT7]-ESFESQFLADTER.2y7_1.heavy 851.906 / 851.426 N/A 34.860599517822266 45 15 10 10 10 2.5134370888843742 39.786155954429105 0.0 3 0.9515065008176402 5.581484910769143 73216.0 15.291844509058981 0.0 - - - - - - - 2615.0 146 1 CUL1 cullin 1 931 118 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9225.[MT7]-FLQVQPVSR.2b3_1.heavy 609.36 / 533.32 13667.0 29.166000366210938 46 16 10 10 10 1.9599682497682749 34.063527598312234 0.0 3 0.9644098708588871 6.522304198918208 13667.0 9.3669 1.0 - - - - - - - 333.0 27 1 CCNB2 cyclin B2 933 118 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9225.[MT7]-FLQVQPVSR.2y8_1.heavy 609.36 / 926.542 22000.0 29.166000366210938 46 16 10 10 10 1.9599682497682749 34.063527598312234 0.0 3 0.9644098708588871 6.522304198918208 22000.0 64.64767616191904 0.0 - - - - - - - 667.0 44 7 CCNB2 cyclin B2 935 118 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9225.[MT7]-FLQVQPVSR.2y6_1.heavy 609.36 / 685.399 9000.0 29.166000366210938 46 16 10 10 10 1.9599682497682749 34.063527598312234 0.0 3 0.9644098708588871 6.522304198918208 9000.0 8.309999999999999 1.0 - - - - - - - 333.0 24 5 CCNB2 cyclin B2 937 118 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9225.[MT7]-FLQVQPVSR.2y7_1.heavy 609.36 / 813.458 18333.0 29.166000366210938 46 16 10 10 10 1.9599682497682749 34.063527598312234 0.0 3 0.9644098708588871 6.522304198918208 18333.0 42.336311694152926 0.0 - - - - - - - 333.0 36 4 CCNB2 cyclin B2 939 119 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9413.[MT7]-LTQALDNYEGFSLA.2b8_1.heavy 843.429 / 1063.55 15585.0 40.21862602233887 36 10 10 6 10 1.1297167905503631 56.98157170773468 0.03769683837890625 3 0.8354186829814431 2.999351497529103 15585.0 33.680995970646904 0.0 - - - - - - - 250.57142857142858 31 14 HERC3 hect domain and RLD 3 941 119 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9413.[MT7]-LTQALDNYEGFSLA.2b4_1.heavy 843.429 / 558.337 19095.0 40.21862602233887 36 10 10 6 10 1.1297167905503631 56.98157170773468 0.03769683837890625 3 0.8354186829814431 2.999351497529103 19095.0 16.138786863562395 0.0 - - - - - - - 733.2222222222222 38 9 HERC3 hect domain and RLD 3 943 119 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9413.[MT7]-LTQALDNYEGFSLA.2b5_1.heavy 843.429 / 671.421 26536.0 40.21862602233887 36 10 10 6 10 1.1297167905503631 56.98157170773468 0.03769683837890625 3 0.8354186829814431 2.999351497529103 26536.0 25.96097136247718 0.0 - - - - - - - 684.75 53 8 HERC3 hect domain and RLD 3 945 119 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9413.[MT7]-LTQALDNYEGFSLA.2b10_1.heavy 843.429 / 1249.62 11373.0 40.21862602233887 36 10 10 6 10 1.1297167905503631 56.98157170773468 0.03769683837890625 3 0.8354186829814431 2.999351497529103 11373.0 111.9751929334011 0.0 - - - - - - - 224.5 22 10 HERC3 hect domain and RLD 3 947 120 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9410.[MT7]-ALLSGSNPPYLPFR.2y9_1.heavy 838.468 / 1090.57 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDC14A CDC14 cell division cycle 14 homolog A (S. cerevisiae) 949 120 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9410.[MT7]-ALLSGSNPPYLPFR.2y10_1.heavy 838.468 / 1147.59 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDC14A CDC14 cell division cycle 14 homolog A (S. cerevisiae) 951 120 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9410.[MT7]-ALLSGSNPPYLPFR.2y11_1.heavy 838.468 / 1234.62 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDC14A CDC14 cell division cycle 14 homolog A (S. cerevisiae) 953 120 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9410.[MT7]-ALLSGSNPPYLPFR.2y7_1.heavy 838.468 / 889.493 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDC14A CDC14 cell division cycle 14 homolog A (S. cerevisiae) 955 121 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9349.[MT7]-YLGSPITTVPK[MT7].2y5_1.heavy 732.439 / 689.431 4333.0 29.80900001525879 41 13 10 10 8 0.6529859368214272 81.54002427784827 0.0 4 0.908501927120508 4.048442528181647 4333.0 3.0323702775918964 1.0 - - - - - - - 333.0 9 4 CDC25C cell division cycle 25 homolog C (S. pombe) 957 121 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9349.[MT7]-YLGSPITTVPK[MT7].2b4_1.heavy 732.439 / 565.31 35000.0 29.80900001525879 41 13 10 10 8 0.6529859368214272 81.54002427784827 0.0 4 0.908501927120508 4.048442528181647 35000.0 26.496039603960398 0.0 - - - - - - - 333.0 70 3 CDC25C cell division cycle 25 homolog C (S. pombe) 959 121 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9349.[MT7]-YLGSPITTVPK[MT7].2b6_1.heavy 732.439 / 775.447 6333.0 29.80900001525879 41 13 10 10 8 0.6529859368214272 81.54002427784827 0.0 4 0.908501927120508 4.048442528181647 6333.0 6.646358249763899 2.0 - - - - - - - 333.0 25 6 CDC25C cell division cycle 25 homolog C (S. pombe) 961 121 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9349.[MT7]-YLGSPITTVPK[MT7].2y7_1.heavy 732.439 / 899.568 21667.0 29.80900001525879 41 13 10 10 8 0.6529859368214272 81.54002427784827 0.0 4 0.908501927120508 4.048442528181647 21667.0 42.012313000000006 0.0 - - - - - - - 333.0 43 5 CDC25C cell division cycle 25 homolog C (S. pombe) 963 122 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A53.[MT7]-FAIGSAR.2y5_1.heavy 433.254 / 503.294 27615.0 24.798500061035156 38 12 10 10 6 1.3054857696447695 63.945581557250065 0.0 6 0.8913804908827176 3.7101944289842166 27615.0 56.44384615384615 0.0 - - - - - - - 303.0 55 5 CHEK2 CHK2 checkpoint homolog (S. pombe) 965 122 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A53.[MT7]-FAIGSAR.2b4_1.heavy 433.254 / 533.32 8800.0 24.798500061035156 38 12 10 10 6 1.3054857696447695 63.945581557250065 0.0 6 0.8913804908827176 3.7101944289842166 8800.0 16.2387613635253 0.0 - - - - - - - 693.5714285714286 17 7 CHEK2 CHK2 checkpoint homolog (S. pombe) 967 122 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A53.[MT7]-FAIGSAR.2y6_1.heavy 433.254 / 574.331 77686.0 24.798500061035156 38 12 10 10 6 1.3054857696447695 63.945581557250065 0.0 6 0.8913804908827176 3.7101944289842166 77686.0 63.72501914709094 1.0 - - - - - - - 866.7142857142857 169 7 CHEK2 CHK2 checkpoint homolog (S. pombe) 969 122 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A53.[MT7]-FAIGSAR.2y1_1.heavy 433.254 / 175.119 17297.0 24.798500061035156 38 12 10 10 6 1.3054857696447695 63.945581557250065 0.0 6 0.8913804908827176 3.7101944289842166 17297.0 5.204351295005002 4.0 - - - - - - - 910.0 69 1 CHEK2 CHK2 checkpoint homolog (S. pombe) 971 123 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A51.[MT7]-LSSSGLR.2b6_1.heavy 432.257 / 689.395 13860.0 21.34079933166504 38 16 10 6 6 1.530437580391979 41.49985519269575 0.0391998291015625 5 0.9618353956708859 6.297105906163694 13860.0 21.598998330550916 0.0 - - - - - - - 257.0 27 2 SHC3 SHC (Src homology 2 domain containing) transforming protein 3 973 123 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A51.[MT7]-LSSSGLR.2y6_1.heavy 432.257 / 606.321 101637.0 21.34079933166504 38 16 10 6 6 1.530437580391979 41.49985519269575 0.0391998291015625 5 0.9618353956708859 6.297105906163694 101637.0 36.07914159469779 1.0 - - - - - - - 257.0 203 2 SHC3 SHC (Src homology 2 domain containing) transforming protein 3 975 123 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A51.[MT7]-LSSSGLR.2b5_1.heavy 432.257 / 576.311 31569.0 21.34079933166504 38 16 10 6 6 1.530437580391979 41.49985519269575 0.0391998291015625 5 0.9618353956708859 6.297105906163694 31569.0 12.641266233766233 2.0 - - - - - - - 257.0 114 3 SHC3 SHC (Src homology 2 domain containing) transforming protein 3 977 123 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A51.[MT7]-LSSSGLR.2y1_1.heavy 432.257 / 175.119 27976.0 21.34079933166504 38 16 10 6 6 1.530437580391979 41.49985519269575 0.0391998291015625 5 0.9618353956708859 6.297105906163694 27976.0 10.010836315713561 2.0 - - - - - - - 257.0 55 1 SHC3 SHC (Src homology 2 domain containing) transforming protein 3 979 124 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A50.[MT7]-NLLSK[MT7].2b3_1.heavy 431.784 / 485.32 16609.0 23.4955997467041 42 16 10 10 6 3.6550246074892825 27.359596921754303 0.0 5 0.9664987401650632 6.723754266075589 16609.0 20.64810738939125 0.0 - - - - - - - 603.2857142857143 33 7 RGS7BP;ORC2 regulator of G-protein signaling 7 binding protein;origin recognition complex, subunit 2 981 124 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A50.[MT7]-NLLSK[MT7].2y4_1.heavy 431.784 / 604.415 35751.0 23.4955997467041 42 16 10 10 6 3.6550246074892825 27.359596921754303 0.0 5 0.9664987401650632 6.723754266075589 35751.0 62.28419408956428 0.0 - - - - - - - 668.75 71 8 RGS7BP;ORC2 regulator of G-protein signaling 7 binding protein;origin recognition complex, subunit 2 983 124 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A50.[MT7]-NLLSK[MT7].2y3_1.heavy 431.784 / 491.331 32091.0 23.4955997467041 42 16 10 10 6 3.6550246074892825 27.359596921754303 0.0 5 0.9664987401650632 6.723754266075589 32091.0 9.574080935158042 3.0 - - - - - - - 724.1428571428571 84 7 RGS7BP;ORC2 regulator of G-protein signaling 7 binding protein;origin recognition complex, subunit 2 985 124 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A50.[MT7]-NLLSK[MT7].2y2_1.heavy 431.784 / 378.247 47293.0 23.4955997467041 42 16 10 10 6 3.6550246074892825 27.359596921754303 0.0 5 0.9664987401650632 6.723754266075589 47293.0 36.12076376554174 0.0 - - - - - - - 1231.75 94 8 RGS7BP;ORC2 regulator of G-protein signaling 7 binding protein;origin recognition complex, subunit 2 987 125 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9354.[MT7]-EASQTSSSPAPK[MT7].2y4_1.heavy 739.39 / 556.357 3891.0 14.888299942016602 45 15 10 10 10 4.32532162802369 18.495723135704033 0.0 3 0.9509238505644068 5.547978949572178 3891.0 8.804321622067425 0.0 - - - - - - - 356.4 7 10 CCND3 cyclin D3 989 125 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9354.[MT7]-EASQTSSSPAPK[MT7].2y5_1.heavy 739.39 / 643.39 2594.0 14.888299942016602 45 15 10 10 10 4.32532162802369 18.495723135704033 0.0 3 0.9509238505644068 5.547978949572178 2594.0 5.260796214716919 0.0 - - - - - - - 324.0 5 6 CCND3 cyclin D3 991 125 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9354.[MT7]-EASQTSSSPAPK[MT7].2y6_1.heavy 739.39 / 730.422 5350.0 14.888299942016602 45 15 10 10 10 4.32532162802369 18.495723135704033 0.0 3 0.9509238505644068 5.547978949572178 5350.0 7.395679012345679 1.0 - - - - - - - 342.0 10 9 CCND3 cyclin D3 993 125 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9354.[MT7]-EASQTSSSPAPK[MT7].2y7_1.heavy 739.39 / 817.454 3891.0 14.888299942016602 45 15 10 10 10 4.32532162802369 18.495723135704033 0.0 3 0.9509238505644068 5.547978949572178 3891.0 7.485925925925925 1.0 - - - - - - - 351.0 7 6 CCND3 cyclin D3 995 126 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A45.[MT7]-EYIER.2b3_1.heavy 427.23 / 550.299 17959.0 19.657100677490234 43 13 10 10 10 1.5114636381764563 66.16103588217811 0.0 3 0.9218883996630763 4.386683197296308 17959.0 24.640931659533337 0.0 - - - - - - - 341.85714285714283 35 7 HECW1;HECW2;PIK3R3;CP110 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1;HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2;phosphoinositide-3-kinase, regulatory subunit 3 (gamma);CP110 protein 997 126 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A45.[MT7]-EYIER.2y4_1.heavy 427.23 / 580.309 61778.0 19.657100677490234 43 13 10 10 10 1.5114636381764563 66.16103588217811 0.0 3 0.9218883996630763 4.386683197296308 61778.0 136.81897842173092 0.0 - - - - - - - 419.0 123 4 HECW1;HECW2;PIK3R3;CP110 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1;HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2;phosphoinositide-3-kinase, regulatory subunit 3 (gamma);CP110 protein 999 126 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A45.[MT7]-EYIER.2b4_1.heavy 427.23 / 679.342 25861.0 19.657100677490234 43 13 10 10 10 1.5114636381764563 66.16103588217811 0.0 3 0.9218883996630763 4.386683197296308 25861.0 128.9797072439968 0.0 - - - - - - - 299.0 51 4 HECW1;HECW2;PIK3R3;CP110 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1;HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2;phosphoinositide-3-kinase, regulatory subunit 3 (gamma);CP110 protein 1001 126 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A45.[MT7]-EYIER.2b2_1.heavy 427.23 / 437.215 28974.0 19.657100677490234 43 13 10 10 10 1.5114636381764563 66.16103588217811 0.0 3 0.9218883996630763 4.386683197296308 28974.0 153.91160615843637 0.0 - - - - - - - 299.0 57 8 HECW1;HECW2;PIK3R3;CP110 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1;HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2;phosphoinositide-3-kinase, regulatory subunit 3 (gamma);CP110 protein 1003 127 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9355.[MT7]-LVFDNQLTIK[MT7].2y8_1.heavy 739.945 / 1122.63 19559.0 34.81700134277344 45 15 10 10 10 16.6357052583337 6.011166851486788 0.0 3 0.95377512975356 5.717908808330207 19559.0 74.77994368932039 0.0 - - - - - - - 257.0 39 5 CDC6 cell division cycle 6 homolog (S. cerevisiae) 1005 127 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9355.[MT7]-LVFDNQLTIK[MT7].2b4_1.heavy 739.945 / 619.357 29853.0 34.81700134277344 45 15 10 10 10 16.6357052583337 6.011166851486788 0.0 3 0.95377512975356 5.717908808330207 29853.0 18.144559362044944 0.0 - - - - - - - 257.0 59 2 CDC6 cell division cycle 6 homolog (S. cerevisiae) 1007 127 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9355.[MT7]-LVFDNQLTIK[MT7].2y3_1.heavy 739.945 / 505.347 21875.0 34.81700134277344 45 15 10 10 10 16.6357052583337 6.011166851486788 0.0 3 0.95377512975356 5.717908808330207 21875.0 13.655637684135092 0.0 - - - - - - - 661.8571428571429 43 7 CDC6 cell division cycle 6 homolog (S. cerevisiae) 1009 127 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9355.[MT7]-LVFDNQLTIK[MT7].2y6_1.heavy 739.945 / 860.532 18015.0 34.81700134277344 45 15 10 10 10 16.6357052583337 6.011166851486788 0.0 3 0.95377512975356 5.717908808330207 18015.0 5.057854194434978 1.0 - - - - - - - 661.8571428571429 37 7 CDC6 cell division cycle 6 homolog (S. cerevisiae) 1011 128 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A46.[MT7]-ALALTAR.2b3_1.heavy 430.278 / 400.268 67468.0 24.576499938964844 48 18 10 10 10 2.8363714118971175 28.04111942530295 0.0 3 0.9832883786743002 9.53336895748754 67468.0 48.71452946286022 0.0 - - - - - - - 301.0 134 1 PRIM2 primase, DNA, polypeptide 2 (58kDa) 1013 128 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A46.[MT7]-ALALTAR.2y5_1.heavy 430.278 / 531.325 76203.0 24.576499938964844 48 18 10 10 10 2.8363714118971175 28.04111942530295 0.0 3 0.9832883786743002 9.53336895748754 76203.0 96.76617535311043 0.0 - - - - - - - 301.0 152 4 PRIM2 primase, DNA, polypeptide 2 (58kDa) 1015 128 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A46.[MT7]-ALALTAR.2b4_1.heavy 430.278 / 513.352 41264.0 24.576499938964844 48 18 10 10 10 2.8363714118971175 28.04111942530295 0.0 3 0.9832883786743002 9.53336895748754 41264.0 58.01353722041295 0.0 - - - - - - - 301.0 82 3 PRIM2 primase, DNA, polypeptide 2 (58kDa) 1017 128 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A46.[MT7]-ALALTAR.2y6_1.heavy 430.278 / 644.409 111443.0 24.576499938964844 48 18 10 10 10 2.8363714118971175 28.04111942530295 0.0 3 0.9832883786743002 9.53336895748754 111443.0 160.9335102687452 0.0 - - - - - - - 301.0 222 3 PRIM2 primase, DNA, polypeptide 2 (58kDa) 1019 129 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9353.[MT7]-ALVPPPRLPTK[MT7].3y7_1.heavy 492.988 / 952.606 12337.0 26.57420031229655 38 13 10 5 10 1.4470931359732864 47.89354134527702 0.04380035400390625 3 0.9292370060876094 4.611735429070867 12337.0 34.88095725837505 0.0 - - - - - - - 325.0 24 2 AIRE autoimmune regulator 1021 129 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9353.[MT7]-ALVPPPRLPTK[MT7].3y6_1.heavy 492.988 / 855.553 9091.0 26.57420031229655 38 13 10 5 10 1.4470931359732864 47.89354134527702 0.04380035400390625 3 0.9292370060876094 4.611735429070867 9091.0 11.542645448323066 0.0 - - - - - - - 325.0 18 2 AIRE autoimmune regulator 1023 129 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9353.[MT7]-ALVPPPRLPTK[MT7].3y4_1.heavy 492.988 / 602.399 15584.0 26.57420031229655 38 13 10 5 10 1.4470931359732864 47.89354134527702 0.04380035400390625 3 0.9292370060876094 4.611735429070867 15584.0 12.706104492228862 0.0 - - - - - - - 325.0 31 1 AIRE autoimmune regulator 1025 129 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9353.[MT7]-ALVPPPRLPTK[MT7].3y8_1.heavy 492.988 / 1049.66 N/A 26.57420031229655 38 13 10 5 10 1.4470931359732864 47.89354134527702 0.04380035400390625 3 0.9292370060876094 4.611735429070867 0.0 -0.0 0.0 - - - - - - - 0.0 0 0 AIRE autoimmune regulator 1027 130 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9359.[MT7]-ELIINEILVMR.2b3_1.heavy 743.943 / 500.32 26612.0 43.653099060058594 48 18 10 10 10 11.949084298916578 8.368842121991472 0.0 3 0.9883660355638819 11.430798145099997 26612.0 33.906035992992514 0.0 - - - - - - - 797.4285714285714 53 7 PAK1;PAK3 p21 protein (Cdc42/Rac)-activated kinase 1;p21 protein (Cdc42/Rac)-activated kinase 3 1029 130 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9359.[MT7]-ELIINEILVMR.2y8_1.heavy 743.943 / 987.566 22924.0 43.653099060058594 48 18 10 10 10 11.949084298916578 8.368842121991472 0.0 3 0.9883660355638819 11.430798145099997 22924.0 107.49056318381204 0.0 - - - - - - - 291.92857142857144 45 14 PAK1;PAK3 p21 protein (Cdc42/Rac)-activated kinase 1;p21 protein (Cdc42/Rac)-activated kinase 3 1031 130 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9359.[MT7]-ELIINEILVMR.2y10_1.heavy 743.943 / 1213.73 12060.0 43.653099060058594 48 18 10 10 10 11.949084298916578 8.368842121991472 0.0 3 0.9883660355638819 11.430798145099997 12060.0 107.23585284280936 0.0 - - - - - - - 208.45454545454547 24 11 PAK1;PAK3 p21 protein (Cdc42/Rac)-activated kinase 1;p21 protein (Cdc42/Rac)-activated kinase 3 1033 130 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9359.[MT7]-ELIINEILVMR.2y7_1.heavy 743.943 / 874.482 18339.0 43.653099060058594 48 18 10 10 10 11.949084298916578 8.368842121991472 0.0 3 0.9883660355638819 11.430798145099997 18339.0 65.99020647225959 0.0 - - - - - - - 332.26666666666665 36 15 PAK1;PAK3 p21 protein (Cdc42/Rac)-activated kinase 1;p21 protein (Cdc42/Rac)-activated kinase 3 1035 131 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9356.[MT7]-TVALDGTLFQK[MT7].2b4_1.heavy 740.934 / 529.347 9334.0 33.11119842529297 43 13 10 10 10 1.815600234521321 43.988467791508896 0.0 3 0.928745169805442 4.595598208797274 9334.0 40.41632336655593 0.0 - - - - - - - 301.0 18 4 SMC1A structural maintenance of chromosomes 1A 1037 131 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9356.[MT7]-TVALDGTLFQK[MT7].2y3_1.heavy 740.934 / 566.342 7528.0 33.11119842529297 43 13 10 10 10 1.815600234521321 43.988467791508896 0.0 3 0.928745169805442 4.595598208797274 7528.0 17.131827242524917 0.0 - - - - - - - 301.0 15 2 SMC1A structural maintenance of chromosomes 1A 1039 131 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9356.[MT7]-TVALDGTLFQK[MT7].2y6_1.heavy 740.934 / 837.495 9334.0 33.11119842529297 43 13 10 10 10 1.815600234521321 43.988467791508896 0.0 3 0.928745169805442 4.595598208797274 9334.0 23.094672757475085 0.0 - - - - - - - 301.0 18 3 SMC1A structural maintenance of chromosomes 1A 1041 131 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9356.[MT7]-TVALDGTLFQK[MT7].2y7_1.heavy 740.934 / 952.522 17464.0 33.11119842529297 43 13 10 10 10 1.815600234521321 43.988467791508896 0.0 3 0.928745169805442 4.595598208797274 17464.0 38.486555924695466 0.0 - - - - - - - 301.0 34 2 SMC1A structural maintenance of chromosomes 1A 1043 132 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9357.[MT7]-LEIFPDVLVHR.3y6_1.heavy 494.625 / 738.426 53959.0 38.16927528381348 46 20 10 6 10 10.159830010236625 9.842684365707314 0.03949737548828125 3 0.9943071240002825 16.348964853689374 53959.0 274.75186351706037 0.0 - - - - - - - 326.7142857142857 107 7 HERC2 hect domain and RLD 2 1045 132 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9357.[MT7]-LEIFPDVLVHR.3b4_1.heavy 494.625 / 647.388 109824.0 38.16927528381348 46 20 10 6 10 10.159830010236625 9.842684365707314 0.03949737548828125 3 0.9943071240002825 16.348964853689374 109824.0 279.10563637972217 0.0 - - - - - - - 381.0 219 4 HERC2 hect domain and RLD 2 1047 132 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9357.[MT7]-LEIFPDVLVHR.3y4_1.heavy 494.625 / 524.33 138042.0 38.16927528381348 46 20 10 6 10 10.159830010236625 9.842684365707314 0.03949737548828125 3 0.9943071240002825 16.348964853689374 138042.0 692.0849366013375 0.0 - - - - - - - 262.25 276 8 HERC2 hect domain and RLD 2 1049 132 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9357.[MT7]-LEIFPDVLVHR.3b3_1.heavy 494.625 / 500.32 193145.0 38.16927528381348 46 20 10 6 10 10.159830010236625 9.842684365707314 0.03949737548828125 3 0.9943071240002825 16.348964853689374 193145.0 439.9789073426573 0.0 - - - - - - - 381.0 386 3 HERC2 hect domain and RLD 2 1051 133 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9408.[MT7]-HLQINQTFEELR.2b3_1.heavy 836.45 / 523.311 8667.0 30.567399978637695 43 13 10 10 10 1.9045639265347691 41.08842821622671 0.0 3 0.9169798746097444 4.2532339518690465 8667.0 21.31016491754123 0.0 - - - - - - - 333.0 17 2 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 1053 133 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9408.[MT7]-HLQINQTFEELR.2y8_1.heavy 836.45 / 1036.51 5667.0 30.567399978637695 43 13 10 10 10 1.9045639265347691 41.08842821622671 0.0 3 0.9169798746097444 4.2532339518690465 5667.0 16.992503748125937 0.0 - - - - - - - 333.0 11 1 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 1055 133 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9408.[MT7]-HLQINQTFEELR.2y5_1.heavy 836.45 / 693.357 2000.0 30.567399978637695 43 13 10 10 10 1.9045639265347691 41.08842821622671 0.0 3 0.9169798746097444 4.2532339518690465 2000.0 7.624476050263157 0.0 - - - - - - - 333.0 4 1 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 1057 133 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9408.[MT7]-HLQINQTFEELR.2y9_1.heavy 836.45 / 1149.59 4000.0 30.567399978637695 43 13 10 10 10 1.9045639265347691 41.08842821622671 0.0 3 0.9169798746097444 4.2532339518690465 4000.0 23.903903903903903 0.0 - - - - - - - 333.0 8 3 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 1059 134 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9214.[MT7]-RTC[CAM]GQGITR.3b6_2.heavy 398.216 / 402.699 6528.0 14.644499778747559 45 15 10 10 10 5.447958305050763 18.355500244429315 0.0 3 0.9552444961688051 5.811736721801813 6528.0 22.443879265636347 0.0 - - - - - - - 215.0 13 13 CCNA1 cyclin A1 1061 134 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9214.[MT7]-RTC[CAM]GQGITR.3b4_1.heavy 398.216 / 619.31 4663.0 14.644499778747559 45 15 10 10 10 5.447958305050763 18.355500244429315 0.0 3 0.9552444961688051 5.811736721801813 4663.0 27.288295819935694 0.0 - - - - - - - 264.1 9 10 CCNA1 cyclin A1 1063 134 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9214.[MT7]-RTC[CAM]GQGITR.3y4_1.heavy 398.216 / 446.272 22693.0 14.644499778747559 45 15 10 10 10 5.447958305050763 18.355500244429315 0.0 3 0.9552444961688051 5.811736721801813 22693.0 83.19461321679971 0.0 - - - - - - - 336.6666666666667 45 12 CCNA1 cyclin A1 1065 134 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9214.[MT7]-RTC[CAM]GQGITR.3b2_1.heavy 398.216 / 402.258 4352.0 14.644499778747559 45 15 10 10 10 5.447958305050763 18.355500244429315 0.0 3 0.9552444961688051 5.811736721801813 4352.0 4.48030888030888 2.0 - - - - - - - 760.0 13 9 CCNA1 cyclin A1 1067 135 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9409.[MT7]-ALLSGSNPPYLPFR.3y7_1.heavy 559.314 / 889.493 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDC14A CDC14 cell division cycle 14 homolog A (S. cerevisiae) 1069 135 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9409.[MT7]-ALLSGSNPPYLPFR.3y6_1.heavy 559.314 / 792.44 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDC14A CDC14 cell division cycle 14 homolog A (S. cerevisiae) 1071 135 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9409.[MT7]-ALLSGSNPPYLPFR.3b5_1.heavy 559.314 / 586.368 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDC14A CDC14 cell division cycle 14 homolog A (S. cerevisiae) 1073 135 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9409.[MT7]-ALLSGSNPPYLPFR.3y5_1.heavy 559.314 / 695.388 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDC14A CDC14 cell division cycle 14 homolog A (S. cerevisiae) 1075 136 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9406.[MT7]-TRYDTSLGLLTK[MT7].3b6_1.heavy 552.657 / 868.428 76000.0 29.612499237060547 38 8 10 10 10 0.7830722254429411 79.95514834512812 0.0 3 0.7602287043382829 2.468182907580327 76000.0 154.40510698460008 0.0 - - - - - - - 333.0 152 2 E2F2;E2F3 E2F transcription factor 2;E2F transcription factor 3 1077 136 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9406.[MT7]-TRYDTSLGLLTK[MT7].3y3_1.heavy 552.657 / 505.347 287333.0 29.612499237060547 38 8 10 10 10 0.7830722254429411 79.95514834512812 0.0 3 0.7602287043382829 2.468182907580327 287333.0 147.41010501800181 0.0 - - - - - - - 333.0 574 3 E2F2;E2F3 E2F transcription factor 2;E2F transcription factor 3 1079 136 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9406.[MT7]-TRYDTSLGLLTK[MT7].3b4_1.heavy 552.657 / 680.348 32333.0 29.612499237060547 38 8 10 10 10 0.7830722254429411 79.95514834512812 0.0 3 0.7602287043382829 2.468182907580327 32333.0 89.1944827586207 0.0 - - - - - - - 333.0 64 3 E2F2;E2F3 E2F transcription factor 2;E2F transcription factor 3 1081 136 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9406.[MT7]-TRYDTSLGLLTK[MT7].3b8_1.heavy 552.657 / 1038.53 65667.0 29.612499237060547 38 8 10 10 10 0.7830722254429411 79.95514834512812 0.0 3 0.7602287043382829 2.468182907580327 65667.0 143.7757890297162 0.0 - - - - - - - 333.0 131 2 E2F2;E2F3 E2F transcription factor 2;E2F transcription factor 3 1083 137 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 SUCC_ECO24.LVQQFTK.2y4.peptide 432.25 / 523.29 138882.0 21.096799850463867 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 138882.0 298.2811950677917 0.0 - - - - - - - 660.6923076923077 277 13 1085 137 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 SUCC_ECO24.LVQQFTK.2y6.peptide 432.25 / 750.41 234837.0 21.096799850463867 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 234837.0 260.133837723395 0.0 - - - - - - - 541.1428571428571 469 7 1087 137 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 SUCC_ECO24.LVQQFTK.2y5.peptide 432.25 / 651.35 595130.0 21.096799850463867 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 595130.0 683.6353578198729 0.0 - - - - - - - 1263.0 1190 3 1089 138 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9351.[MT7]-IDSAPLALLHK[MT7].3y3_1.heavy 489.304 / 541.358 24411.0 32.80540084838867 47 17 10 10 10 1.8451853255358202 41.95555288934615 0.0 3 0.9721933179109641 7.383737634653513 24411.0 115.735 0.0 - - - - - - - 309.0 48 4 CHEK1 CHK1 checkpoint homolog (S. pombe) 1091 138 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9351.[MT7]-IDSAPLALLHK[MT7].3b6_1.heavy 489.304 / 741.426 16377.0 32.80540084838867 47 17 10 10 10 1.8451853255358202 41.95555288934615 0.0 3 0.9721933179109641 7.383737634653513 16377.0 50.88 0.0 - - - - - - - 309.0 32 4 CHEK1 CHK1 checkpoint homolog (S. pombe) 1093 138 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9351.[MT7]-IDSAPLALLHK[MT7].3b4_1.heavy 489.304 / 531.289 49131.0 32.80540084838867 47 17 10 10 10 1.8451853255358202 41.95555288934615 0.0 3 0.9721933179109641 7.383737634653513 49131.0 130.115 0.0 - - - - - - - 309.0 98 6 CHEK1 CHK1 checkpoint homolog (S. pombe) 1095 138 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9351.[MT7]-IDSAPLALLHK[MT7].3b7_1.heavy 489.304 / 812.463 10815.0 32.80540084838867 47 17 10 10 10 1.8451853255358202 41.95555288934615 0.0 3 0.9721933179109641 7.383737634653513 10815.0 28.233333333333334 0.0 - - - - - - - 309.0 21 2 CHEK1 CHK1 checkpoint homolog (S. pombe) 1097 139 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9407.[MT7]-TRYDTSLGLLTK[MT7].2b8_1.heavy 828.482 / 1038.53 N/A 29.59636624654134 39 14 10 5 10 1.8323651651027353 45.129378847593834 0.04839897155761719 3 0.9450482219671686 5.240375157521561 1000.0 2.0998509754131938 1.0 - - - - - - - 333.0 4 4 E2F2;E2F3 E2F transcription factor 2;E2F transcription factor 3 1099 139 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9407.[MT7]-TRYDTSLGLLTK[MT7].2y8_1.heavy 828.482 / 976.616 2333.0 29.59636624654134 39 14 10 5 10 1.8323651651027353 45.129378847593834 0.04839897155761719 3 0.9450482219671686 5.240375157521561 2333.0 3.614576011994003 1.0 - - - - - - - 667.0 4 7 E2F2;E2F3 E2F transcription factor 2;E2F transcription factor 3 1101 139 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9407.[MT7]-TRYDTSLGLLTK[MT7].2b4_1.heavy 828.482 / 680.348 4333.0 29.59636624654134 39 14 10 5 10 1.8323651651027353 45.129378847593834 0.04839897155761719 3 0.9450482219671686 5.240375157521561 4333.0 21.339699699699697 0.0 - - - - - - - 333.0 8 4 E2F2;E2F3 E2F transcription factor 2;E2F transcription factor 3 1103 139 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9407.[MT7]-TRYDTSLGLLTK[MT7].2y3_1.heavy 828.482 / 505.347 3333.0 29.59636624654134 39 14 10 5 10 1.8323651651027353 45.129378847593834 0.04839897155761719 3 0.9450482219671686 5.240375157521561 3333.0 11.803427745586665 0.0 - - - - - - - 333.0 6 7 E2F2;E2F3 E2F transcription factor 2;E2F transcription factor 3 1105 140 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9404.[MT7]-ISLDQIDLLSTK[MT7].3b4_1.heavy 545.325 / 573.336 58187.0 37.557098388671875 43 13 10 10 10 0.9408270575908083 65.27473860051911 0.0 3 0.923094423495716 4.421402494907951 58187.0 320.9101212121212 0.0 - - - - - - - 297.0 116 4 PRIM2 primase, DNA, polypeptide 2 (58kDa) 1107 140 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9404.[MT7]-ISLDQIDLLSTK[MT7].3b5_1.heavy 545.325 / 701.395 92823.0 37.557098388671875 43 13 10 10 10 0.9408270575908083 65.27473860051911 0.0 3 0.923094423495716 4.421402494907951 92823.0 113.09185255797725 0.0 - - - - - - - 717.75 185 8 PRIM2 primase, DNA, polypeptide 2 (58kDa) 1109 140 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9404.[MT7]-ISLDQIDLLSTK[MT7].3y4_1.heavy 545.325 / 592.379 64521.0 37.557098388671875 43 13 10 10 10 0.9408270575908083 65.27473860051911 0.0 3 0.923094423495716 4.421402494907951 64521.0 205.55878158844766 0.0 - - - - - - - 286.0 129 9 PRIM2 primase, DNA, polypeptide 2 (58kDa) 1111 140 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9404.[MT7]-ISLDQIDLLSTK[MT7].3b7_1.heavy 545.325 / 929.506 56406.0 37.557098388671875 43 13 10 10 10 0.9408270575908083 65.27473860051911 0.0 3 0.923094423495716 4.421402494907951 56406.0 315.16807959570434 0.0 - - - - - - - 792.0 112 7 PRIM2 primase, DNA, polypeptide 2 (58kDa) 1113 141 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9210.[MT7]-ISFEYDLR.2b4_1.heavy 593.815 / 621.336 35557.0 33.61220169067383 41 11 10 10 10 1.3092434958609742 60.176680054631944 0.0 3 0.8581242109813967 3.236939154539922 35557.0 57.496425531914895 0.0 - - - - - - - 620.6666666666666 71 9 CDC45 cell division cycle 45 homolog (S. cerevisiae) 1115 141 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9210.[MT7]-ISFEYDLR.2b6_1.heavy 593.815 / 899.427 104613.0 33.61220169067383 41 11 10 10 10 1.3092434958609742 60.176680054631944 0.0 3 0.8581242109813967 3.236939154539922 104613.0 233.51312855811636 0.0 - - - - - - - 294.0 209 1 CDC45 cell division cycle 45 homolog (S. cerevisiae) 1117 141 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9210.[MT7]-ISFEYDLR.2y6_1.heavy 593.815 / 842.404 10579.0 33.61220169067383 41 11 10 10 10 1.3092434958609742 60.176680054631944 0.0 3 0.8581242109813967 3.236939154539922 10579.0 21.6521487511624 0.0 - - - - - - - 294.0 21 3 CDC45 cell division cycle 45 homolog (S. cerevisiae) 1119 141 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9210.[MT7]-ISFEYDLR.2y7_1.heavy 593.815 / 929.436 57890.0 33.61220169067383 41 11 10 10 10 1.3092434958609742 60.176680054631944 0.0 3 0.8581242109813967 3.236939154539922 57890.0 113.55635340714736 0.0 - - - - - - - 294.0 115 1 CDC45 cell division cycle 45 homolog (S. cerevisiae) 1121 142 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9403.[MT7]-DVK[MT7]PSNILVNSR.3b6_1.heavy 543.989 / 929.529 8300.0 24.6872501373291 34 9 10 5 10 0.5960225723063362 91.1034963792726 0.044300079345703125 3 0.8193213600373405 2.8585244947289024 8300.0 11.757355836081318 0.0 - - - - - - - 296.0 16 4 MAP2K1;MAP2K2 mitogen-activated protein kinase kinase 1;mitogen-activated protein kinase kinase 2 1123 142 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9403.[MT7]-DVK[MT7]PSNILVNSR.3y5_1.heavy 543.989 / 588.346 38834.0 24.6872501373291 34 9 10 5 10 0.5960225723063362 91.1034963792726 0.044300079345703125 3 0.8193213600373405 2.8585244947289024 38834.0 29.910088857179918 0.0 - - - - - - - 296.0 77 1 MAP2K1;MAP2K2 mitogen-activated protein kinase kinase 1;mitogen-activated protein kinase kinase 2 1125 142 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9403.[MT7]-DVK[MT7]PSNILVNSR.3b7_2.heavy 543.989 / 521.81 31719.0 24.6872501373291 34 9 10 5 10 0.5960225723063362 91.1034963792726 0.044300079345703125 3 0.8193213600373405 2.8585244947289024 31719.0 28.376114401778324 2.0 - - - - - - - 741.0 63 4 MAP2K1;MAP2K2 mitogen-activated protein kinase kinase 1;mitogen-activated protein kinase kinase 2 1127 142 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9403.[MT7]-DVK[MT7]PSNILVNSR.3y9_1.heavy 543.989 / 999.558 14822.0 24.6872501373291 34 9 10 5 10 0.5960225723063362 91.1034963792726 0.044300079345703125 3 0.8193213600373405 2.8585244947289024 14822.0 31.460299044406973 0.0 - - - - - - - 296.0 29 2 MAP2K1;MAP2K2 mitogen-activated protein kinase kinase 1;mitogen-activated protein kinase kinase 2 1129 143 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9402.[MT7]-QGLANVVSLEWLR.2y6_1.heavy 814.966 / 803.441 3408.0 42.214250564575195 40 14 10 6 10 5.973751679055209 16.73989904043278 0.035701751708984375 3 0.9319206884417629 4.702833220355867 3408.0 7.949633744141642 0.0 - - - - - - - 253.8421052631579 6 19 UBE3C ubiquitin protein ligase E3C 1131 143 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9402.[MT7]-QGLANVVSLEWLR.2y10_1.heavy 814.966 / 1186.66 5875.0 42.214250564575195 40 14 10 6 10 5.973751679055209 16.73989904043278 0.035701751708984375 3 0.9319206884417629 4.702833220355867 5875.0 56.459463676957796 0.0 - - - - - - - 235.30769230769232 11 13 UBE3C ubiquitin protein ligase E3C 1133 143 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9402.[MT7]-QGLANVVSLEWLR.2b5_1.heavy 814.966 / 628.354 2938.0 42.214250564575195 40 14 10 6 10 5.973751679055209 16.73989904043278 0.035701751708984375 3 0.9319206884417629 4.702833220355867 2938.0 18.660399493701405 0.0 - - - - - - - 244.3846153846154 5 13 UBE3C ubiquitin protein ligase E3C 1135 143 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9402.[MT7]-QGLANVVSLEWLR.2y7_1.heavy 814.966 / 902.509 4700.0 42.214250564575195 40 14 10 6 10 5.973751679055209 16.73989904043278 0.035701751708984375 3 0.9319206884417629 4.702833220355867 4700.0 30.383002832861195 0.0 - - - - - - - 262.38461538461536 9 13 UBE3C ubiquitin protein ligase E3C 1137 144 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A60.[MT7]-LLVGGK[MT7].2b3_1.heavy 437.802 / 470.346 28790.0 25.328699111938477 48 18 10 10 10 4.767355839976569 20.975988232607257 0.0 3 0.9812491216087527 8.998509909380273 28790.0 9.017755078400855 1.0 - - - - - - - 313.0 62 6 STAT5A;STAT5B;KIF3B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B;kinesin family member 3B 1139 144 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A60.[MT7]-LLVGGK[MT7].2y4_1.heavy 437.802 / 504.326 96696.0 25.328699111938477 48 18 10 10 10 4.767355839976569 20.975988232607257 0.0 3 0.9812491216087527 8.998509909380273 96696.0 135.15814696485623 0.0 - - - - - - - 313.0 193 2 STAT5A;STAT5B;KIF3B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B;kinesin family member 3B 1141 144 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A60.[MT7]-LLVGGK[MT7].2y5_1.heavy 437.802 / 617.41 91063.0 25.328699111938477 48 18 10 10 10 4.767355839976569 20.975988232607257 0.0 3 0.9812491216087527 8.998509909380273 91063.0 25.390297810237165 0.0 - - - - - - - 313.0 182 1 STAT5A;STAT5B;KIF3B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B;kinesin family member 3B 1143 144 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A60.[MT7]-LLVGGK[MT7].2y3_1.heavy 437.802 / 405.258 100138.0 25.328699111938477 48 18 10 10 10 4.767355839976569 20.975988232607257 0.0 3 0.9812491216087527 8.998509909380273 100138.0 52.09294244019617 0.0 - - - - - - - 939.0 200 1 STAT5A;STAT5B;KIF3B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B;kinesin family member 3B 1145 145 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A55.[MT7]-TIPVTNENK[MT7].3y3_1.heavy 435.254 / 534.3 8138.0 20.304800033569336 48 20 10 10 8 46.49751075871852 2.1506527633040977 0.0 4 0.9994403262020961 52.1644490532698 8138.0 16.10841210852996 2.0 - - - - - - - 387.57142857142856 20 7 UBE3B ubiquitin protein ligase E3B 1147 145 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A55.[MT7]-TIPVTNENK[MT7].3b4_1.heavy 435.254 / 555.362 15043.0 20.304800033569336 48 20 10 10 8 46.49751075871852 2.1506527633040977 0.0 4 0.9994403262020961 52.1644490532698 15043.0 37.416586426182775 1.0 - - - - - - - 329.0 30 9 UBE3B ubiquitin protein ligase E3B 1149 145 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A55.[MT7]-TIPVTNENK[MT7].3y4_1.heavy 435.254 / 648.343 7398.0 20.304800033569336 48 20 10 10 8 46.49751075871852 2.1506527633040977 0.0 4 0.9994403262020961 52.1644490532698 7398.0 16.726036511156188 0.0 - - - - - - - 370.0 14 8 UBE3B ubiquitin protein ligase E3B 1151 145 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A55.[MT7]-TIPVTNENK[MT7].3y5_1.heavy 435.254 / 749.391 2713.0 20.304800033569336 48 20 10 10 8 46.49751075871852 2.1506527633040977 0.0 4 0.9994403262020961 52.1644490532698 2713.0 21.001036437246963 0.0 - - - - - - - 247.0 5 6 UBE3B ubiquitin protein ligase E3B 1153 146 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A58.[MT7]-NVVGGQR.2b3_1.heavy 437.255 / 457.289 11609.0 15.402099609375 43 13 10 10 10 1.3064409492533149 51.29564640453303 0.0 3 0.9133539503278921 4.161990875120946 11609.0 15.46993607543677 0.0 - - - - - - - 595.3333333333334 23 9 SFN stratifin 1155 146 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A58.[MT7]-NVVGGQR.2y5_1.heavy 437.255 / 516.289 27863.0 15.402099609375 43 13 10 10 10 1.3064409492533149 51.29564640453303 0.0 3 0.9133539503278921 4.161990875120946 27863.0 74.87766257995736 0.0 - - - - - - - 586.8571428571429 55 7 SFN stratifin 1157 146 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A58.[MT7]-NVVGGQR.2y6_1.heavy 437.255 / 615.357 30006.0 15.402099609375 43 13 10 10 10 1.3064409492533149 51.29564640453303 0.0 3 0.9133539503278921 4.161990875120946 30006.0 56.01270538065973 0.0 - - - - - - - 276.09090909090907 60 11 SFN stratifin 1159 146 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A58.[MT7]-NVVGGQR.2y1_1.heavy 437.255 / 175.119 18575.0 15.402099609375 43 13 10 10 10 1.3064409492533149 51.29564640453303 0.0 3 0.9133539503278921 4.161990875120946 18575.0 6.642156294553336 2.0 - - - - - - - 625.0 37 2 SFN stratifin 1161 147 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9348.[MT7]-IQDFNDTFYR.2b3_1.heavy 731.858 / 501.279 46409.0 32.095550537109375 38 13 10 5 10 1.191083527484682 56.8836783307931 0.0478973388671875 3 0.9045174866631892 3.9617100458667727 46409.0 33.19946101221349 0.0 - - - - - - - 322.0 92 1 UBA3 ubiquitin-like modifier activating enzyme 3 1163 147 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9348.[MT7]-IQDFNDTFYR.2y4_1.heavy 731.858 / 586.298 30617.0 32.095550537109375 38 13 10 5 10 1.191083527484682 56.8836783307931 0.0478973388671875 3 0.9045174866631892 3.9617100458667727 30617.0 42.74348500517063 0.0 - - - - - - - 322.0 61 4 UBA3 ubiquitin-like modifier activating enzyme 3 1165 147 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9348.[MT7]-IQDFNDTFYR.2y9_1.heavy 731.858 / 1205.52 22560.0 32.095550537109375 38 13 10 5 10 1.191083527484682 56.8836783307931 0.0478973388671875 3 0.9045174866631892 3.9617100458667727 22560.0 48.805584859902126 0.0 - - - - - - - 322.0 45 7 UBA3 ubiquitin-like modifier activating enzyme 3 1167 147 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9348.[MT7]-IQDFNDTFYR.2y7_1.heavy 731.858 / 962.437 31262.0 32.095550537109375 38 13 10 5 10 1.191083527484682 56.8836783307931 0.0478973388671875 3 0.9045174866631892 3.9617100458667727 31262.0 65.4490136576037 0.0 - - - - - - - 645.0 62 7 UBA3 ubiquitin-like modifier activating enzyme 3 1169 148 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9204.[MT7]-TVLEEIGNR.2y8_1.heavy 587.831 / 929.505 26333.0 29.677300135294598 43 18 10 5 10 5.119342685807039 19.533757776607114 0.04920005798339844 3 0.9894326950895845 11.994911934190338 26333.0 65.93119940029985 0.0 - - - - - - - 333.0 52 2 CCNB2 cyclin B2 1171 148 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9204.[MT7]-TVLEEIGNR.2b4_1.heavy 587.831 / 587.352 N/A 29.677300135294598 43 18 10 5 10 5.119342685807039 19.533757776607114 0.04920005798339844 3 0.9894326950895845 11.994911934190338 220667.0 16.598651601540208 0.0 - - - - - - - 9667.0 441 1 CCNB2 cyclin B2 1173 148 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9204.[MT7]-TVLEEIGNR.2y6_1.heavy 587.831 / 717.353 23000.0 29.677300135294598 43 18 10 5 10 5.119342685807039 19.533757776607114 0.04920005798339844 3 0.9894326950895845 11.994911934190338 23000.0 63.877230568903485 0.0 - - - - - - - 333.0 46 5 CCNB2 cyclin B2 1175 148 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9204.[MT7]-TVLEEIGNR.2y7_1.heavy 587.831 / 830.437 32000.0 29.677300135294598 43 18 10 5 10 5.119342685807039 19.533757776607114 0.04920005798339844 3 0.9894326950895845 11.994911934190338 32000.0 113.27608352203433 0.0 - - - - - - - 333.0 64 3 CCNB2 cyclin B2 1177 149 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9340.[MT7]-DIVAIILNEFR.2y8_1.heavy 723.925 / 975.562 60729.0 52.389801025390625 45 15 10 10 10 2.1386884409199127 37.0293117532336 0.0 3 0.9503754976461682 5.51698432769465 60729.0 4202.680468686042 0.0 - - - - - - - 248.6153846153846 121 13 PRIM2 primase, DNA, polypeptide 2 (58kDa) 1179 149 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9340.[MT7]-DIVAIILNEFR.2y9_1.heavy 723.925 / 1074.63 29011.0 52.389801025390625 45 15 10 10 10 2.1386884409199127 37.0293117532336 0.0 3 0.9503754976461682 5.51698432769465 29011.0 1046.8079215456673 0.0 - - - - - - - 180.94117647058823 58 17 PRIM2 primase, DNA, polypeptide 2 (58kDa) 1181 149 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9340.[MT7]-DIVAIILNEFR.2b4_1.heavy 723.925 / 543.326 66938.0 52.389801025390625 45 15 10 10 10 2.1386884409199127 37.0293117532336 0.0 3 0.9503754976461682 5.51698432769465 66938.0 1545.8007906976745 0.0 - - - - - - - 694.375 133 8 PRIM2 primase, DNA, polypeptide 2 (58kDa) 1183 149 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9340.[MT7]-DIVAIILNEFR.2y7_1.heavy 723.925 / 904.525 37414.0 52.389801025390625 45 15 10 10 10 2.1386884409199127 37.0293117532336 0.0 3 0.9503754976461682 5.51698432769465 37414.0 573.4142393343109 0.0 - - - - - - - 152.3 74 20 PRIM2 primase, DNA, polypeptide 2 (58kDa) 1185 150 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9276.[MT7]-ETLQELYK[MT7].2y4_1.heavy 656.374 / 696.405 21333.0 28.370800018310547 47 17 10 10 10 3.9450980493303667 20.976020895433454 0.0 3 0.9739566117396445 7.630738177256461 21333.0 31.1355135 0.0 - - - - - - - 333.0 42 3 PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2 1187 150 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9276.[MT7]-ETLQELYK[MT7].2b6_1.heavy 656.374 / 858.469 13667.0 28.370800018310547 47 17 10 10 10 3.9450980493303667 20.976020895433454 0.0 3 0.9739566117396445 7.630738177256461 13667.0 44.11480708014842 0.0 - - - - - - - 333.0 27 5 PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2 1189 150 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9276.[MT7]-ETLQELYK[MT7].2b5_1.heavy 656.374 / 745.385 16333.0 28.370800018310547 47 17 10 10 10 3.9450980493303667 20.976020895433454 0.0 3 0.9739566117396445 7.630738177256461 16333.0 92.7008108108108 0.0 - - - - - - - 333.0 32 5 PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2 1191 150 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9276.[MT7]-ETLQELYK[MT7].2y7_1.heavy 656.374 / 1038.6 13333.0 28.370800018310547 47 17 10 10 10 3.9450980493303667 20.976020895433454 0.0 3 0.9739566117396445 7.630738177256461 13333.0 38.27081497747748 1.0 - - - - - - - 333.0 32 3 PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2 1193 151 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9370.[MT7]-TALALEVGDIVK[MT7].2y8_1.heavy 758.963 / 1016.61 20028.0 35.838600158691406 47 17 10 10 10 4.289041744050335 23.31523122588345 0.0 3 0.9762510604602652 7.992395913979342 20028.0 84.87593335443584 0.0 - - - - - - - 377.0 40 10 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 1195 151 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9370.[MT7]-TALALEVGDIVK[MT7].2b4_1.heavy 758.963 / 501.315 48773.0 35.838600158691406 47 17 10 10 10 4.289041744050335 23.31523122588345 0.0 3 0.9762510604602652 7.992395913979342 48773.0 73.8441589864173 0.0 - - - - - - - 303.14285714285717 97 7 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 1197 151 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9370.[MT7]-TALALEVGDIVK[MT7].2b6_1.heavy 758.963 / 743.442 21441.0 35.838600158691406 47 17 10 10 10 4.289041744050335 23.31523122588345 0.0 3 0.9762510604602652 7.992395913979342 21441.0 20.740254777070064 1.0 - - - - - - - 392.6666666666667 42 6 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 1199 151 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9370.[MT7]-TALALEVGDIVK[MT7].2y6_1.heavy 758.963 / 774.484 20499.0 35.838600158691406 47 17 10 10 10 4.289041744050335 23.31523122588345 0.0 3 0.9762510604602652 7.992395913979342 20499.0 38.995974522293 0.0 - - - - - - - 340.44444444444446 40 9 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 1201 152 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9373.[MT7]-DMEANLLPGFLR.2b3_1.heavy 760.407 / 520.219 7652.0 40.7536506652832 38 12 10 6 10 5.456730864114823 18.32599087076686 0.0363006591796875 3 0.8919060977312134 3.7193735883195433 7652.0 53.94822212045559 0.0 - - - - - - - 225.875 15 8 ORC5 origin recognition complex, subunit 5 1203 152 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9373.[MT7]-DMEANLLPGFLR.2y5_1.heavy 760.407 / 589.346 16974.0 40.7536506652832 38 12 10 6 10 5.456730864114823 18.32599087076686 0.0363006591796875 3 0.8919060977312134 3.7193735883195433 16974.0 56.55708818334554 0.0 - - - - - - - 278.0 33 14 ORC5 origin recognition complex, subunit 5 1205 152 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9373.[MT7]-DMEANLLPGFLR.2y9_1.heavy 760.407 / 1000.59 10574.0 40.7536506652832 38 12 10 6 10 5.456730864114823 18.32599087076686 0.0363006591796875 3 0.8919060977312134 3.7193735883195433 10574.0 41.014509467053216 0.0 - - - - - - - 265.3636363636364 21 11 ORC5 origin recognition complex, subunit 5 1207 152 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9373.[MT7]-DMEANLLPGFLR.2b5_1.heavy 760.407 / 705.299 5983.0 40.7536506652832 38 12 10 6 10 5.456730864114823 18.32599087076686 0.0363006591796875 3 0.8919060977312134 3.7193735883195433 5983.0 6.448742514970061 1.0 - - - - - - - 817.625 12 8 ORC5 origin recognition complex, subunit 5 1209 153 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9279.[MT7]-NITNSQAPDGR.2y8_1.heavy 658.837 / 844.391 17769.0 16.92020034790039 47 17 10 10 10 4.068448807354889 19.557385430801453 0.0 3 0.9795593432945223 8.617323312770385 17769.0 65.83878761045291 0.0 - - - - - - - 332.6666666666667 35 3 CDC25B cell division cycle 25 homolog B (S. pombe) 1211 153 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9279.[MT7]-NITNSQAPDGR.2y9_1.heavy 658.837 / 945.438 16970.0 16.92020034790039 47 17 10 10 10 4.068448807354889 19.557385430801453 0.0 3 0.9795593432945223 8.617323312770385 16970.0 50.9047833915201 0.0 - - - - - - - 319.4 33 5 CDC25B cell division cycle 25 homolog B (S. pombe) 1213 153 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9279.[MT7]-NITNSQAPDGR.2y10_1.heavy 658.837 / 1058.52 10382.0 16.92020034790039 47 17 10 10 10 4.068448807354889 19.557385430801453 0.0 3 0.9795593432945223 8.617323312770385 10382.0 63.011287145242065 0.0 - - - - - - - 239.8 20 5 CDC25B cell division cycle 25 homolog B (S. pombe) 1215 153 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9279.[MT7]-NITNSQAPDGR.2y7_1.heavy 658.837 / 730.348 9184.0 16.92020034790039 47 17 10 10 10 4.068448807354889 19.557385430801453 0.0 3 0.9795593432945223 8.617323312770385 9184.0 11.029338874965573 0.0 - - - - - - - 299.5 18 4 CDC25B cell division cycle 25 homolog B (S. pombe) 1217 154 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9379.[MT7]-LPEFYDETLLR.2y4_1.heavy 770.412 / 502.335 7920.0 38.46315002441406 45 20 10 5 10 12.438748254104038 8.039394154231397 0.04129791259765625 3 0.9915641255056309 13.42738795466205 7920.0 22.055696202531642 0.0 - - - - - - - 284.3636363636364 15 11 UBE3C ubiquitin protein ligase E3C 1219 154 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9379.[MT7]-LPEFYDETLLR.2y8_1.heavy 770.412 / 1056.54 20075.0 38.46315002441406 45 20 10 5 10 12.438748254104038 8.039394154231397 0.04129791259765625 3 0.9915641255056309 13.42738795466205 20075.0 69.24578195976639 0.0 - - - - - - - 253.0 40 8 UBE3C ubiquitin protein ligase E3C 1221 154 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9379.[MT7]-LPEFYDETLLR.2y9_1.heavy 770.412 / 1185.58 9025.0 38.46315002441406 45 20 10 5 10 12.438748254104038 8.039394154231397 0.04129791259765625 3 0.9915641255056309 13.42738795466205 9025.0 68.66847826086956 0.0 - - - - - - - 253.0 18 8 UBE3C ubiquitin protein ligase E3C 1223 154 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9379.[MT7]-LPEFYDETLLR.2y6_1.heavy 770.412 / 746.404 7920.0 38.46315002441406 45 20 10 5 10 12.438748254104038 8.039394154231397 0.04129791259765625 3 0.9915641255056309 13.42738795466205 7920.0 12.613415478945274 0.0 - - - - - - - 668.0 15 8 UBE3C ubiquitin protein ligase E3C 1225 155 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9378.[MT7]-DTSFTVC[CAM]PDVPR.2y8_1.heavy 769.375 / 943.467 18000.0 27.97749948501587 38 13 10 5 10 2.884978127281548 29.441383635005135 0.04839897155761719 3 0.9083015627148797 4.043947232908923 18000.0 52.89355322338831 0.0 - - - - - - - 333.0 36 4 CDC25C cell division cycle 25 homolog C (S. pombe) 1227 155 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9378.[MT7]-DTSFTVC[CAM]PDVPR.2y5_1.heavy 769.375 / 583.32 15667.0 27.97749948501587 38 13 10 5 10 2.884978127281548 29.441383635005135 0.04839897155761719 3 0.9083015627148797 4.043947232908923 15667.0 31.19587146288883 0.0 - - - - - - - 333.0 31 4 CDC25C cell division cycle 25 homolog C (S. pombe) 1229 155 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9378.[MT7]-DTSFTVC[CAM]PDVPR.2y9_1.heavy 769.375 / 1090.54 3000.0 27.97749948501587 38 13 10 5 10 2.884978127281548 29.441383635005135 0.04839897155761719 3 0.9083015627148797 4.043947232908923 3000.0 7.944486619152559 1.0 - - - - - - - 333.0 7 4 CDC25C cell division cycle 25 homolog C (S. pombe) 1231 155 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9378.[MT7]-DTSFTVC[CAM]PDVPR.2y3_1.heavy 769.375 / 371.24 22333.0 27.97749948501587 38 13 10 5 10 2.884978127281548 29.441383635005135 0.04839897155761719 3 0.9083015627148797 4.043947232908923 22333.0 19.159222135572886 0.0 - - - - - - - 333.0 44 3 CDC25C cell division cycle 25 homolog C (S. pombe) 1233 156 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9657.[MT7]-TIETLLGSTTK[MT7].3b4_1.heavy 484.624 / 589.331 57697.0 33.35969924926758 46 16 10 10 10 2.584474941671083 30.90863443075851 0.0 3 0.9651197728664911 6.588737559006495 57697.0 137.42021959459458 0.0 - - - - - - - 666.0 115 8 POLE2 polymerase (DNA directed), epsilon 2 (p59 subunit) 1235 156 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9657.[MT7]-TIETLLGSTTK[MT7].3b5_1.heavy 484.624 / 702.415 55922.0 33.35969924926758 46 16 10 10 10 2.584474941671083 30.90863443075851 0.0 3 0.9651197728664911 6.588737559006495 55922.0 94.22668074324324 0.0 - - - - - - - 624.8888888888889 111 9 POLE2 polymerase (DNA directed), epsilon 2 (p59 subunit) 1237 156 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9657.[MT7]-TIETLLGSTTK[MT7].3b3_1.heavy 484.624 / 488.284 45566.0 33.35969924926758 46 16 10 10 10 2.584474941671083 30.90863443075851 0.0 3 0.9651197728664911 6.588737559006495 45566.0 100.8440451275219 0.0 - - - - - - - 703.0 91 8 POLE2 polymerase (DNA directed), epsilon 2 (p59 subunit) 1239 156 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9657.[MT7]-TIETLLGSTTK[MT7].3y5_1.heavy 484.624 / 637.364 97346.0 33.35969924926758 46 16 10 10 10 2.584474941671083 30.90863443075851 0.0 3 0.9651197728664911 6.588737559006495 97346.0 93.45156921012688 0.0 - - - - - - - 296.0 194 3 POLE2 polymerase (DNA directed), epsilon 2 (p59 subunit) 1241 157 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 CH10_ECO24.SAGGIVLTGSAAAK.2y7.peptide 601.84 / 605.33 490704.0 24.209199905395508 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 490704.0 398.412957741548 0.0 - - - - - - - 4699.0 981 1 1243 157 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 CH10_ECO24.SAGGIVLTGSAAAK.2y8.peptide 601.84 / 718.41 636556.0 24.209199905395508 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 636556.0 1019.6507269345245 0.0 - - - - - - - 3818.0 1273 1 1245 157 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 CH10_ECO24.SAGGIVLTGSAAAK.2y9.peptide 601.84 / 817.48 698124.0 24.209199905395508 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 698124.0 351.26845690426626 0.0 - - - - - - - 7341.0 1396 1 1247 158 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9270.[MT7]-EFLEEIIK[MT7].2b3_1.heavy 654.886 / 534.304 53514.0 37.16189956665039 50 20 10 10 10 7.44678868239459 13.428607184250593 0.0 3 0.994397848195635 16.480939916053014 53514.0 57.84872458428757 0.0 - - - - - - - 276.3333333333333 107 6 UBE3B ubiquitin protein ligase E3B 1249 158 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9270.[MT7]-EFLEEIIK[MT7].2b4_1.heavy 654.886 / 663.347 41069.0 37.16189956665039 50 20 10 10 10 7.44678868239459 13.428607184250593 0.0 3 0.994397848195635 16.480939916053014 41069.0 56.100807348253866 0.0 - - - - - - - 276.3333333333333 82 6 UBE3B ubiquitin protein ligase E3B 1251 158 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9270.[MT7]-EFLEEIIK[MT7].2b5_1.heavy 654.886 / 792.39 67204.0 37.16189956665039 50 20 10 10 10 7.44678868239459 13.428607184250593 0.0 3 0.994397848195635 16.480939916053014 67204.0 111.75191855096374 0.0 - - - - - - - 363.0 134 4 UBE3B ubiquitin protein ligase E3B 1253 158 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9270.[MT7]-EFLEEIIK[MT7].2y7_1.heavy 654.886 / 1035.62 55588.0 37.16189956665039 50 20 10 10 10 7.44678868239459 13.428607184250593 0.0 3 0.994397848195635 16.480939916053014 55588.0 113.270129373252 0.0 - - - - - - - 233.0 111 8 UBE3B ubiquitin protein ligase E3B 1255 159 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9272.[MT7]-WFLDALEK[MT7].2y4_1.heavy 655.373 / 604.379 31878.0 40.32379913330078 48 18 10 10 10 10.5638119388289 9.46627984093836 0.0 3 0.9874503002064957 11.005010565973238 31878.0 71.24039284119962 0.0 - - - - - - - 328.0 63 11 CDC16 cell division cycle 16 homolog (S. cerevisiae) 1257 159 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9272.[MT7]-WFLDALEK[MT7].2b4_1.heavy 655.373 / 706.368 21653.0 40.32379913330078 48 18 10 10 10 10.5638119388289 9.46627984093836 0.0 3 0.9874503002064957 11.005010565973238 21653.0 51.99811150299146 0.0 - - - - - - - 285.6 43 10 CDC16 cell division cycle 16 homolog (S. cerevisiae) 1259 159 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9272.[MT7]-WFLDALEK[MT7].2b5_1.heavy 655.373 / 777.405 8571.0 40.32379913330078 48 18 10 10 10 10.5638119388289 9.46627984093836 0.0 3 0.9874503002064957 11.005010565973238 8571.0 17.87827500225171 0.0 - - - - - - - 259.6363636363636 17 11 CDC16 cell division cycle 16 homolog (S. cerevisiae) 1261 159 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9272.[MT7]-WFLDALEK[MT7].2y7_1.heavy 655.373 / 979.558 24209.0 40.32379913330078 48 18 10 10 10 10.5638119388289 9.46627984093836 0.0 3 0.9874503002064957 11.005010565973238 24209.0 99.14409274432964 0.0 - - - - - - - 270.8 48 5 CDC16 cell division cycle 16 homolog (S. cerevisiae) 1263 160 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9271.[MT7]-YQQDQLVK[MT7].2b4_1.heavy 655.371 / 679.317 35628.0 22.568700790405273 46 16 10 10 10 3.1498184182360327 24.974395912450795 0.0 3 0.9626997295091227 6.370112610841281 35628.0 97.32962406015037 0.0 - - - - - - - 266.0 71 5 PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 1265 160 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9271.[MT7]-YQQDQLVK[MT7].2y3_1.heavy 655.371 / 503.367 10103.0 22.568700790405273 46 16 10 10 10 3.1498184182360327 24.974395912450795 0.0 3 0.9626997295091227 6.370112610841281 10103.0 30.384962406015042 0.0 - - - - - - - 608.0 20 7 PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 1267 160 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9271.[MT7]-YQQDQLVK[MT7].2b5_1.heavy 655.371 / 807.375 17282.0 22.568700790405273 46 16 10 10 10 3.1498184182360327 24.974395912450795 0.0 3 0.9626997295091227 6.370112610841281 17282.0 54.11994736842105 0.0 - - - - - - - 266.0 34 3 PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 1269 160 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9271.[MT7]-YQQDQLVK[MT7].2y7_1.heavy 655.371 / 1002.57 21004.0 22.568700790405273 46 16 10 10 10 3.1498184182360327 24.974395912450795 0.0 3 0.9626997295091227 6.370112610841281 21004.0 99.49263157894738 0.0 - - - - - - - 266.0 42 3 PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 1271 161 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9377.[MT7]-VIAEDEVLWYR.2y9_1.heavy 768.913 / 1180.56 26024.0 36.80039978027344 44 14 10 10 10 2.067173087292618 38.33618169059151 0.0 3 0.9424904072862386 5.121398657132836 26024.0 234.3348310502283 0.0 - - - - - - - 246.25 52 8 FBXW8 F-box and WD repeat domain containing 8 1273 161 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9377.[MT7]-VIAEDEVLWYR.2b6_1.heavy 768.913 / 801.411 6998.0 36.80039978027344 44 14 10 10 10 2.067173087292618 38.33618169059151 0.0 3 0.9424904072862386 5.121398657132836 6998.0 14.532631578947369 1.0 - - - - - - - 291.6666666666667 13 12 FBXW8 F-box and WD repeat domain containing 8 1275 161 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9377.[MT7]-VIAEDEVLWYR.2y6_1.heavy 768.913 / 865.457 13559.0 36.80039978027344 44 14 10 10 10 2.067173087292618 38.33618169059151 0.0 3 0.9424904072862386 5.121398657132836 13559.0 12.239839879608729 2.0 - - - - - - - 364.3333333333333 34 12 FBXW8 F-box and WD repeat domain containing 8 1277 161 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9377.[MT7]-VIAEDEVLWYR.2y7_1.heavy 768.913 / 980.484 11153.0 36.80039978027344 44 14 10 10 10 2.067173087292618 38.33618169059151 0.0 3 0.9424904072862386 5.121398657132836 11153.0 41.503172057264045 0.0 - - - - - - - 374.7142857142857 22 7 FBXW8 F-box and WD repeat domain containing 8 1279 162 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9376.[MT7]-VSELQVLLGFAGR.2y9_1.heavy 766.949 / 960.563 61676.0 45.14919853210449 44 18 10 6 10 8.437834107204784 11.851382562097701 0.033199310302734375 3 0.9860068409942153 10.420696603064282 61676.0 112.10085219707057 0.0 - - - - - - - 698.875 123 8 PIAS3;PIAS2 protein inhibitor of activated STAT, 3;protein inhibitor of activated STAT, 2 1281 162 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9376.[MT7]-VSELQVLLGFAGR.2y10_1.heavy 766.949 / 1073.65 37556.0 45.14919853210449 44 18 10 6 10 8.437834107204784 11.851382562097701 0.033199310302734375 3 0.9860068409942153 10.420696603064282 37556.0 104.72073636289065 0.0 - - - - - - - 679.7142857142857 75 7 PIAS3;PIAS2 protein inhibitor of activated STAT, 3;protein inhibitor of activated STAT, 2 1283 162 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9376.[MT7]-VSELQVLLGFAGR.2b5_1.heavy 766.949 / 701.395 63846.0 45.14919853210449 44 18 10 6 10 8.437834107204784 11.851382562097701 0.033199310302734375 3 0.9860068409942153 10.420696603064282 63846.0 118.35728390335086 0.0 - - - - - - - 787.0 127 7 PIAS3;PIAS2 protein inhibitor of activated STAT, 3;protein inhibitor of activated STAT, 2 1285 162 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9376.[MT7]-VSELQVLLGFAGR.2y7_1.heavy 766.949 / 733.435 58087.0 45.14919853210449 44 18 10 6 10 8.437834107204784 11.851382562097701 0.033199310302734375 3 0.9860068409942153 10.420696603064282 58087.0 177.09131249794683 0.0 - - - - - - - 282.3076923076923 116 13 PIAS3;PIAS2 protein inhibitor of activated STAT, 3;protein inhibitor of activated STAT, 2 1287 163 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9273.[MT7]-EIPEVLVDPR.2b8_1.heavy 655.875 / 1039.58 51849.0 32.16740036010742 35 5 10 10 10 0.6462745871292378 78.75032134555553 0.0 3 0.6509648858505183 2.024881324315563 51849.0 166.48215729823943 0.0 - - - - - - - 1571.0 103 1 PLK1 polo-like kinase 1 1289 163 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9273.[MT7]-EIPEVLVDPR.2b4_1.heavy 655.875 / 613.331 8484.0 32.16740036010742 35 5 10 10 10 0.6462745871292378 78.75032134555553 0.0 3 0.6509648858505183 2.024881324315563 8484.0 1.0600318057355147 3.0 - - - - - - - 314.0 19 3 PLK1 polo-like kinase 1 1291 163 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9273.[MT7]-EIPEVLVDPR.2b6_1.heavy 655.875 / 825.484 14455.0 32.16740036010742 35 5 10 10 10 0.6462745871292378 78.75032134555553 0.0 3 0.6509648858505183 2.024881324315563 14455.0 8.515559991321327 0.0 - - - - - - - 785.5 28 4 PLK1 polo-like kinase 1 1293 163 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9273.[MT7]-EIPEVLVDPR.2b5_1.heavy 655.875 / 712.4 17283.0 32.16740036010742 35 5 10 10 10 0.6462745871292378 78.75032134555553 0.0 3 0.6509648858505183 2.024881324315563 17283.0 18.486046469229212 2.0 - - - - - - - 628.0 34 1 PLK1 polo-like kinase 1 1295 164 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9662.[MT7]-IGDAIVLGMITQLK[MT7].3b6_1.heavy 587.358 / 713.431 31715.0 45.74399948120117 35 13 4 10 8 2.1805294713591175 37.79183247385508 0.0 4 0.9279267989501193 4.569112809498745 31715.0 211.7517419643092 0.0 - - - - - - - 164.73333333333332 63 15 POLE2 polymerase (DNA directed), epsilon 2 (p59 subunit) 1297 164 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9662.[MT7]-IGDAIVLGMITQLK[MT7].3b4_1.heavy 587.358 / 501.279 24301.0 45.74399948120117 35 13 4 10 8 2.1805294713591175 37.79183247385508 0.0 4 0.9279267989501193 4.569112809498745 24301.0 167.53693638370459 0.0 - - - - - - - 210.38888888888889 48 18 POLE2 polymerase (DNA directed), epsilon 2 (p59 subunit) 1299 164 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9662.[MT7]-IGDAIVLGMITQLK[MT7].3b5_1.heavy 587.358 / 614.363 44401.0 45.74399948120117 35 13 4 10 8 2.1805294713591175 37.79183247385508 0.0 4 0.9279267989501193 4.569112809498745 44401.0 81.45891155617679 1.0 - - - - - - - 753.2857142857143 152 7 POLE2 polymerase (DNA directed), epsilon 2 (p59 subunit) 1301 164 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9662.[MT7]-IGDAIVLGMITQLK[MT7].3y4_1.heavy 587.358 / 633.405 43248.0 45.74399948120117 35 13 4 10 8 2.1805294713591175 37.79183247385508 0.0 4 0.9279267989501193 4.569112809498745 43248.0 162.10612445996875 0.0 - - - - - - - 278.125 86 16 POLE2 polymerase (DNA directed), epsilon 2 (p59 subunit) 1303 165 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9362.[MT7]-LSAIFRDFLNR.3y10_2.heavy 499.288 / 619.836 11608.0 41.61470031738281 46 16 10 10 10 3.279598661933482 24.396465639662814 0.0 3 0.9619828836107011 6.309387584266452 11608.0 169.56609230769232 0.0 - - - - - - - 217.0 23 6 PAK1 p21 protein (Cdc42/Rac)-activated kinase 1 1305 165 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9362.[MT7]-LSAIFRDFLNR.3b5_1.heavy 499.288 / 676.415 17868.0 41.61470031738281 46 16 10 10 10 3.279598661933482 24.396465639662814 0.0 3 0.9619828836107011 6.309387584266452 17868.0 152.86437052880004 0.0 - - - - - - - 260.6666666666667 35 3 PAK1 p21 protein (Cdc42/Rac)-activated kinase 1 1307 165 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9362.[MT7]-LSAIFRDFLNR.3y4_1.heavy 499.288 / 549.314 10955.0 41.61470031738281 46 16 10 10 10 3.279598661933482 24.396465639662814 0.0 3 0.9619828836107011 6.309387584266452 10955.0 46.80713826531924 0.0 - - - - - - - 217.22222222222223 21 9 PAK1 p21 protein (Cdc42/Rac)-activated kinase 1 1309 165 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9362.[MT7]-LSAIFRDFLNR.3y5_1.heavy 499.288 / 664.341 4956.0 41.61470031738281 46 16 10 10 10 3.279598661933482 24.396465639662814 0.0 3 0.9619828836107011 6.309387584266452 4956.0 45.67465959328028 0.0 - - - - - - - 195.5 9 6 PAK1 p21 protein (Cdc42/Rac)-activated kinase 1 1311 166 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9267.[MT7]-FYSFLVLK[MT7].2b3_1.heavy 652.896 / 542.273 8892.0 41.275400161743164 40 14 10 6 10 1.5113881559638926 43.90996292090455 0.03639984130859375 3 0.9360345666426731 4.853411038881129 8892.0 20.777788944723618 0.0 - - - - - - - 253.1818181818182 17 11 RAD21;RAD21L1 RAD21 homolog (S. pombe);RAD21-like 1 (S. pombe) 1313 166 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9267.[MT7]-FYSFLVLK[MT7].2y3_1.heavy 652.896 / 503.367 16191.0 41.275400161743164 40 14 10 6 10 1.5113881559638926 43.90996292090455 0.03639984130859375 3 0.9360345666426731 4.853411038881129 16191.0 79.8655396681064 0.0 - - - - - - - 680.25 32 8 RAD21;RAD21L1 RAD21 homolog (S. pombe);RAD21-like 1 (S. pombe) 1315 166 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9267.[MT7]-FYSFLVLK[MT7].2b5_1.heavy 652.896 / 802.426 14466.0 41.275400161743164 40 14 10 6 10 1.5113881559638926 43.90996292090455 0.03639984130859375 3 0.9360345666426731 4.853411038881129 14466.0 68.19986781792986 0.0 - - - - - - - 265.25 28 12 RAD21;RAD21L1 RAD21 homolog (S. pombe);RAD21-like 1 (S. pombe) 1317 166 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9267.[MT7]-FYSFLVLK[MT7].2y7_1.heavy 652.896 / 1013.62 18315.0 41.275400161743164 40 14 10 6 10 1.5113881559638926 43.90996292090455 0.03639984130859375 3 0.9360345666426731 4.853411038881129 18315.0 84.5652807803006 0.0 - - - - - - - 238.8 36 10 RAD21;RAD21L1 RAD21 homolog (S. pombe);RAD21-like 1 (S. pombe) 1319 167 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9361.[MT7]-SLNVSSSVNQASR.2b4_1.heavy 746.895 / 558.337 34916.0 22.158599853515625 38 12 10 6 10 1.1401904934612284 57.53614516114328 0.03839874267578125 3 0.8879671969533127 3.652155141997301 34916.0 74.0388542328618 0.0 - - - - - - - 263.0 69 2 HERC2 hect domain and RLD 2 1321 167 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9361.[MT7]-SLNVSSSVNQASR.2y9_1.heavy 746.895 / 935.454 25727.0 22.158599853515625 38 12 10 6 10 1.1401904934612284 57.53614516114328 0.03839874267578125 3 0.8879671969533127 3.652155141997301 25727.0 66.95114382402707 0.0 - - - - - - - 263.0 51 5 HERC2 hect domain and RLD 2 1323 167 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9361.[MT7]-SLNVSSSVNQASR.2y10_1.heavy 746.895 / 1034.52 12601.0 22.158599853515625 38 12 10 6 10 1.1401904934612284 57.53614516114328 0.03839874267578125 3 0.8879671969533127 3.652155141997301 12601.0 59.0324539431781 0.0 - - - - - - - 637.7142857142857 25 7 HERC2 hect domain and RLD 2 1325 167 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9361.[MT7]-SLNVSSSVNQASR.2y11_1.heavy 746.895 / 1148.57 14964.0 22.158599853515625 38 12 10 6 10 1.1401904934612284 57.53614516114328 0.03839874267578125 3 0.8879671969533127 3.652155141997301 14964.0 51.26179250407387 0.0 - - - - - - - 263.0 29 1 HERC2 hect domain and RLD 2 1327 168 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9266.[MT7]-TIPVTNENK[MT7].2y4_1.heavy 652.377 / 648.343 9371.0 20.346500396728516 50 20 10 10 10 10.893849716669878 9.17949141954648 0.0 3 0.9967063779485547 21.498403841016195 9371.0 19.149122202494468 0.0 - - - - - - - 849.3333333333334 18 9 UBE3B ubiquitin protein ligase E3B 1329 168 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9266.[MT7]-TIPVTNENK[MT7].2y5_1.heavy 652.377 / 749.391 18988.0 20.346500396728516 50 20 10 10 10 10.893849716669878 9.17949141954648 0.0 3 0.9967063779485547 21.498403841016195 18988.0 71.63829614604462 0.0 - - - - - - - 400.75 37 8 UBE3B ubiquitin protein ligase E3B 1331 168 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9266.[MT7]-TIPVTNENK[MT7].2y6_1.heavy 652.377 / 848.459 9864.0 20.346500396728516 50 20 10 10 10 10.893849716669878 9.17949141954648 0.0 3 0.9967063779485547 21.498403841016195 9864.0 43.1354371375424 0.0 - - - - - - - 308.5 19 4 UBE3B ubiquitin protein ligase E3B 1333 168 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9266.[MT7]-TIPVTNENK[MT7].2y7_1.heavy 652.377 / 945.512 91242.0 20.346500396728516 50 20 10 10 10 10.893849716669878 9.17949141954648 0.0 3 0.9967063779485547 21.498403841016195 91242.0 374.6287449392713 0.0 - - - - - - - 329.0 182 3 UBE3B ubiquitin protein ligase E3B 1335 169 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9265.[MT7]-ALASAAGQTPK[MT7].2y8_1.heavy 651.885 / 903.502 28901.0 19.838499069213867 44 16 10 10 8 1.9593272523657614 36.87876440116627 0.0 4 0.969579313567043 7.057822167149992 28901.0 163.09278008298756 0.0 - - - - - - - 361.5 57 6 E2F2 E2F transcription factor 2 1337 169 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9265.[MT7]-ALASAAGQTPK[MT7].2y5_1.heavy 651.885 / 674.395 32754.0 19.838499069213867 44 16 10 10 8 1.9593272523657614 36.87876440116627 0.0 4 0.969579313567043 7.057822167149992 32754.0 186.19493775933609 1.0 - - - - - - - 321.3333333333333 66 9 E2F2 E2F transcription factor 2 1339 169 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9265.[MT7]-ALASAAGQTPK[MT7].2y9_1.heavy 651.885 / 974.539 17822.0 19.838499069213867 44 16 10 10 8 1.9593272523657614 36.87876440116627 0.0 4 0.969579313567043 7.057822167149992 17822.0 108.63285477178422 0.0 - - - - - - - 341.4166666666667 35 12 E2F2 E2F transcription factor 2 1341 169 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9265.[MT7]-ALASAAGQTPK[MT7].2b6_1.heavy 651.885 / 629.374 22639.0 19.838499069213867 44 16 10 10 8 1.9593272523657614 36.87876440116627 0.0 4 0.969579313567043 7.057822167149992 22639.0 7.858690273249882 1.0 - - - - - - - 337.4 45 5 E2F2 E2F transcription factor 2 1343 170 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9264.[MT7]-QVSGQLLEER.2y8_1.heavy 651.86 / 931.484 31661.0 25.4596004486084 47 17 10 10 10 13.73681394166003 7.27970841162281 0.0 3 0.9745235310398421 7.715541140379429 31661.0 32.65612681796185 0.0 - - - - - - - 310.0 63 2 MAD1L1 MAD1 mitotic arrest deficient-like 1 (yeast) 1345 170 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9264.[MT7]-QVSGQLLEER.2y9_1.heavy 651.86 / 1030.55 25142.0 25.4596004486084 47 17 10 10 10 13.73681394166003 7.27970841162281 0.0 3 0.9745235310398421 7.715541140379429 25142.0 109.43711443561372 0.0 - - - - - - - 310.0 50 3 MAD1L1 MAD1 mitotic arrest deficient-like 1 (yeast) 1347 170 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9264.[MT7]-QVSGQLLEER.2b6_1.heavy 651.86 / 757.432 13347.0 25.4596004486084 47 17 10 10 10 13.73681394166003 7.27970841162281 0.0 3 0.9745235310398421 7.715541140379429 13347.0 28.66316100811034 0.0 - - - - - - - 310.0 26 6 MAD1L1 MAD1 mitotic arrest deficient-like 1 (yeast) 1349 170 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9264.[MT7]-QVSGQLLEER.2b5_1.heavy 651.86 / 644.348 9002.0 25.4596004486084 47 17 10 10 10 13.73681394166003 7.27970841162281 0.0 3 0.9745235310398421 7.715541140379429 9002.0 9.371183711973844 0.0 - - - - - - - 310.0 18 5 MAD1L1 MAD1 mitotic arrest deficient-like 1 (yeast) 1351 171 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9269.[MT7]-LLQTSNITK[MT7].2y8_1.heavy 653.403 / 1048.61 51248.0 26.545000076293945 50 20 10 10 10 42.008517737228324 2.380469613936868 0.0 3 0.9940479528826366 15.98871430204565 51248.0 88.84142054263259 0.0 - - - - - - - 324.0 102 2 PAK1;PAK2;PAK3 p21 protein (Cdc42/Rac)-activated kinase 1;p21 protein (Cdc42/Rac)-activated kinase 2;p21 protein (Cdc42/Rac)-activated kinase 3 1353 171 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9269.[MT7]-LLQTSNITK[MT7].2y5_1.heavy 653.403 / 706.422 32111.0 26.545000076293945 50 20 10 10 10 42.008517737228324 2.380469613936868 0.0 3 0.9940479528826366 15.98871430204565 32111.0 111.48073975740041 0.0 - - - - - - - 324.0 64 4 PAK1;PAK2;PAK3 p21 protein (Cdc42/Rac)-activated kinase 1;p21 protein (Cdc42/Rac)-activated kinase 2;p21 protein (Cdc42/Rac)-activated kinase 3 1355 171 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9269.[MT7]-LLQTSNITK[MT7].2y6_1.heavy 653.403 / 807.469 49950.0 26.545000076293945 50 20 10 10 10 42.008517737228324 2.380469613936868 0.0 3 0.9940479528826366 15.98871430204565 49950.0 87.67510273653154 0.0 - - - - - - - 324.0 99 5 PAK1;PAK2;PAK3 p21 protein (Cdc42/Rac)-activated kinase 1;p21 protein (Cdc42/Rac)-activated kinase 2;p21 protein (Cdc42/Rac)-activated kinase 3 1357 171 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9269.[MT7]-LLQTSNITK[MT7].2y7_1.heavy 653.403 / 935.528 37949.0 26.545000076293945 50 20 10 10 10 42.008517737228324 2.380469613936868 0.0 3 0.9940479528826366 15.98871430204565 37949.0 41.543203301000574 0.0 - - - - - - - 834.1428571428571 75 7 PAK1;PAK2;PAK3 p21 protein (Cdc42/Rac)-activated kinase 1;p21 protein (Cdc42/Rac)-activated kinase 2;p21 protein (Cdc42/Rac)-activated kinase 3 1359 172 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9268.[MT7]-IEELGSELK[MT7].2b3_1.heavy 653.379 / 516.279 25667.0 29.911100387573242 47 17 10 10 10 3.2558976018549637 24.106919970092957 0.0 3 0.9765372779890527 8.04119051303218 25667.0 32.26511086979903 0.0 - - - - - - - 333.0 51 3 POLA2 polymerase (DNA directed), alpha 2 (70kD subunit) 1361 172 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9268.[MT7]-IEELGSELK[MT7].2y8_1.heavy 653.379 / 1048.56 14667.0 29.911100387573242 47 17 10 10 10 3.2558976018549637 24.106919970092957 0.0 3 0.9765372779890527 8.04119051303218 14667.0 8.544417532183834 1.0 - - - - - - - 333.0 35 3 POLA2 polymerase (DNA directed), alpha 2 (70kD subunit) 1363 172 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9268.[MT7]-IEELGSELK[MT7].2y5_1.heavy 653.379 / 677.395 35333.0 29.911100387573242 47 17 10 10 10 3.2558976018549637 24.106919970092957 0.0 3 0.9765372779890527 8.04119051303218 35333.0 49.3925201693099 0.0 - - - - - - - 333.0 70 2 POLA2 polymerase (DNA directed), alpha 2 (70kD subunit) 1365 172 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9268.[MT7]-IEELGSELK[MT7].2y6_1.heavy 653.379 / 790.479 13667.0 29.911100387573242 47 17 10 10 10 3.2558976018549637 24.106919970092957 0.0 3 0.9765372779890527 8.04119051303218 13667.0 46.94303582526738 1.0 - - - - - - - 333.0 40 2 POLA2 polymerase (DNA directed), alpha 2 (70kD subunit) 1367 173 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9369.[MT7]-QSPC[CAM]IAVQVVRI.2b6_1.heavy 757.436 / 801.404 4647.0 33.56230163574219 48 18 10 10 10 4.687969606499392 21.3311963160683 0.0 3 0.9880154069572568 11.262013173479854 4647.0 7.891635111876076 0.0 - - - - - - - 290.0 9 3 POLA2 polymerase (DNA directed), alpha 2 (70kD subunit) 1369 173 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9369.[MT7]-QSPC[CAM]IAVQVVRI.2y10_1.heavy 757.436 / 1154.67 10746.0 33.56230163574219 48 18 10 10 10 4.687969606499392 21.3311963160683 0.0 3 0.9880154069572568 11.262013173479854 10746.0 54.06866259125171 0.0 - - - - - - - 290.0 21 1 POLA2 polymerase (DNA directed), alpha 2 (70kD subunit) 1371 173 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9369.[MT7]-QSPC[CAM]IAVQVVRI.2y11_1.heavy 757.436 / 1241.7 10746.0 33.56230163574219 48 18 10 10 10 4.687969606499392 21.3311963160683 0.0 3 0.9880154069572568 11.262013173479854 10746.0 53.701299780402394 0.0 - - - - - - - 290.0 21 2 POLA2 polymerase (DNA directed), alpha 2 (70kD subunit) 1373 173 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9369.[MT7]-QSPC[CAM]IAVQVVRI.2y7_1.heavy 757.436 / 784.504 6971.0 33.56230163574219 48 18 10 10 10 4.687969606499392 21.3311963160683 0.0 3 0.9880154069572568 11.262013173479854 6971.0 10.440155237241765 1.0 - - - - - - - 290.0 13 3 POLA2 polymerase (DNA directed), alpha 2 (70kD subunit) 1375 174 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 TPX_ECO57.DLSDVTLGQFAGK.2y7.peptide 675.85 / 720.4 708604.0 33.46030044555664 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 708604.0 117.69893784121348 0.0 - - - - - - - 290.0 1417 2 1377 174 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 TPX_ECO57.DLSDVTLGQFAGK.2y8.peptide 675.85 / 821.45 1602520.0 33.46030044555664 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 1602520.0 165.5342718164743 0.0 - - - - - - - 290.0 3205 1 1379 174 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 TPX_ECO57.DLSDVTLGQFAGK.2y6.peptide 675.85 / 607.32 1457810.0 33.46030044555664 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 1457810.0 93.8614027834731 0.0 - - - - - - - 290.0 2915 2 1381 175 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9367.[MT7]-LFLQLIAEFK[MT7].3b4_1.heavy 503.981 / 646.404 27985.0 49.605098724365234 45 15 10 10 10 3.0621159075473874 25.55589011919073 0.0 3 0.9540620128028985 5.73587469769435 27985.0 410.04469255463636 0.0 - - - - - - - 260.0833333333333 55 12 POLE polymerase (DNA directed), epsilon 1383 175 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9367.[MT7]-LFLQLIAEFK[MT7].3b5_1.heavy 503.981 / 759.489 15395.0 49.605098724365234 45 15 10 10 10 3.0621159075473874 25.55589011919073 0.0 3 0.9540620128028985 5.73587469769435 15395.0 500.18040816326527 0.0 - - - - - - - 192.75 30 16 POLE polymerase (DNA directed), epsilon 1385 175 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9367.[MT7]-LFLQLIAEFK[MT7].3b3_1.heavy 503.981 / 518.346 13922.0 49.605098724365234 45 15 10 10 10 3.0621159075473874 25.55589011919073 0.0 3 0.9540620128028985 5.73587469769435 13922.0 425.34331890057683 0.0 - - - - - - - 180.46153846153845 27 13 POLE polymerase (DNA directed), epsilon 1387 175 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9367.[MT7]-LFLQLIAEFK[MT7].3y4_1.heavy 503.981 / 638.363 33807.0 49.605098724365234 45 15 10 10 10 3.0621159075473874 25.55589011919073 0.0 3 0.9540620128028985 5.73587469769435 33807.0 1007.6664556677019 0.0 - - - - - - - 223.0909090909091 67 11 POLE polymerase (DNA directed), epsilon 1389 176 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9365.[MT7]-LIDLC[CAM]QPTQK[MT7].2y4_1.heavy 752.426 / 617.374 21667.0 29.759199142456055 47 17 10 10 10 2.3554119545569323 33.18168642720367 0.0 3 0.971121284747791 7.244738296365602 21667.0 47.92609946339658 0.0 - - - - - - - 333.0 43 3 SMC1A structural maintenance of chromosomes 1A 1391 176 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9365.[MT7]-LIDLC[CAM]QPTQK[MT7].2y9_1.heavy 752.426 / 1246.66 3667.0 29.759199142456055 47 17 10 10 10 2.3554119545569323 33.18168642720367 0.0 3 0.971121284747791 7.244738296365602 3667.0 3.4303299999999997 3.0 - - - - - - - 333.0 28 2 SMC1A structural maintenance of chromosomes 1A 1393 176 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9365.[MT7]-LIDLC[CAM]QPTQK[MT7].2b6_1.heavy 752.426 / 887.478 6000.0 29.759199142456055 47 17 10 10 10 2.3554119545569323 33.18168642720367 0.0 3 0.971121284747791 7.244738296365602 6000.0 19.697297297297297 0.0 - - - - - - - 333.0 12 5 SMC1A structural maintenance of chromosomes 1A 1395 176 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9365.[MT7]-LIDLC[CAM]QPTQK[MT7].2y7_1.heavy 752.426 / 1018.55 9667.0 29.759199142456055 47 17 10 10 10 2.3554119545569323 33.18168642720367 0.0 3 0.971121284747791 7.244738296365602 9667.0 39.460820130475305 0.0 - - - - - - - 333.0 19 5 SMC1A structural maintenance of chromosomes 1A 1397 177 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9262.[MT7]-RVPC[CAM]AYDK[MT7].3y3_1.heavy 432.904 / 569.305 41009.0 18.7406005859375 47 17 10 10 10 4.9291279810607165 20.287564125791 0.0 3 0.9776154241603008 8.233309946768536 41009.0 102.95404262764107 0.0 - - - - - - - 771.5 82 8 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 1399 177 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9262.[MT7]-RVPC[CAM]AYDK[MT7].3b4_1.heavy 432.904 / 657.362 5953.0 18.7406005859375 47 17 10 10 10 4.9291279810607165 20.287564125791 0.0 3 0.9776154241603008 8.233309946768536 5953.0 33.67353535353536 0.0 - - - - - - - 308.4 11 5 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 1401 177 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9262.[MT7]-RVPC[CAM]AYDK[MT7].3b5_1.heavy 432.904 / 728.399 10803.0 18.7406005859375 47 17 10 10 10 4.9291279810607165 20.287564125791 0.0 3 0.9776154241603008 8.233309946768536 10803.0 69.67389393939393 0.0 - - - - - - - 330.5 21 4 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 1403 177 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9262.[MT7]-RVPC[CAM]AYDK[MT7].3y4_1.heavy 432.904 / 640.342 29103.0 18.7406005859375 47 17 10 10 10 4.9291279810607165 20.287564125791 0.0 3 0.9776154241603008 8.233309946768536 29103.0 194.3139696969697 0.0 - - - - - - - 330.5 58 6 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 1405 178 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9364.[MT7]-ADQDRLDLEER.3b9_2.heavy 501.922 / 600.802 37582.0 22.773399353027344 39 13 8 10 8 1.799571048281138 49.14106230316324 0.0 4 0.9266568778248684 4.528890977643833 37582.0 42.30619136960601 0.0 - - - - - - - 1142.2857142857142 75 7 SMC1A structural maintenance of chromosomes 1A 1407 178 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9364.[MT7]-ADQDRLDLEER.3b4_1.heavy 501.922 / 574.259 27187.0 22.773399353027344 39 13 8 10 8 1.799571048281138 49.14106230316324 0.0 4 0.9266568778248684 4.528890977643833 27187.0 45.64021267416935 1.0 - - - - - - - 699.875 101 8 SMC1A structural maintenance of chromosomes 1A 1409 178 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9364.[MT7]-ADQDRLDLEER.3y4_1.heavy 501.922 / 546.288 39714.0 22.773399353027344 39 13 8 10 8 1.799571048281138 49.14106230316324 0.0 4 0.9266568778248684 4.528890977643833 39714.0 53.53642284466377 0.0 - - - - - - - 609.2857142857143 79 7 SMC1A structural maintenance of chromosomes 1A 1411 178 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9364.[MT7]-ADQDRLDLEER.3y5_1.heavy 501.922 / 661.315 18391.0 22.773399353027344 39 13 8 10 8 1.799571048281138 49.14106230316324 0.0 4 0.9266568778248684 4.528890977643833 18391.0 29.25521464793966 0.0 - - - - - - - 267.0 36 5 SMC1A structural maintenance of chromosomes 1A 1413 179 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9260.[MT7]-EFLNELLK[MT7].2b3_1.heavy 647.386 / 534.304 43318.0 37.4203987121582 40 14 10 6 10 1.554066534530241 45.38793351526215 0.0391998291015625 3 0.9454263919237679 5.258669628887282 43318.0 33.65632277450422 0.0 - - - - - - - 342.3333333333333 86 3 UBE3C ubiquitin protein ligase E3C 1415 179 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9260.[MT7]-EFLNELLK[MT7].2y5_1.heavy 647.386 / 760.469 52146.0 37.4203987121582 40 14 10 6 10 1.554066534530241 45.38793351526215 0.0391998291015625 3 0.9454263919237679 5.258669628887282 52146.0 81.00835353848112 0.0 - - - - - - - 733.1428571428571 104 7 UBE3C ubiquitin protein ligase E3C 1417 179 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9260.[MT7]-EFLNELLK[MT7].2y3_1.heavy 647.386 / 517.383 40239.0 37.4203987121582 40 14 10 6 10 1.554066534530241 45.38793351526215 0.0391998291015625 3 0.9454263919237679 5.258669628887282 40239.0 39.61073135380238 0.0 - - - - - - - 1205.875 80 8 UBE3C ubiquitin protein ligase E3C 1419 179 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9260.[MT7]-EFLNELLK[MT7].2b5_1.heavy 647.386 / 777.39 40854.0 37.4203987121582 40 14 10 6 10 1.554066534530241 45.38793351526215 0.0391998291015625 3 0.9454263919237679 5.258669628887282 40854.0 75.65555555555555 0.0 - - - - - - - 308.0 81 8 UBE3C ubiquitin protein ligase E3C 1421 180 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9363.[MT7]-TLGPAEPSVPDK[MT7].3b6_1.heavy 500.283 / 713.395 38017.0 24.464099884033203 43 18 10 5 10 5.5460734211145795 18.03077464126021 0.045398712158203125 3 0.9862341318248038 10.5065734528641 38017.0 74.24041974850226 0.0 - - - - - - - 295.0 76 2 UBOX5 U-box domain containing 5 1423 180 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9363.[MT7]-TLGPAEPSVPDK[MT7].3y3_1.heavy 500.283 / 503.295 109335.0 24.464099884033203 43 18 10 5 10 5.5460734211145795 18.03077464126021 0.045398712158203125 3 0.9862341318248038 10.5065734528641 109335.0 90.1603672612842 0.0 - - - - - - - 589.0 218 4 UBOX5 U-box domain containing 5 1425 180 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9363.[MT7]-TLGPAEPSVPDK[MT7].3b5_1.heavy 500.283 / 584.352 24166.0 24.464099884033203 43 18 10 5 10 5.5460734211145795 18.03077464126021 0.045398712158203125 3 0.9862341318248038 10.5065734528641 24166.0 65.49441030506495 0.0 - - - - - - - 295.0 48 5 UBOX5 U-box domain containing 5 1427 180 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9363.[MT7]-TLGPAEPSVPDK[MT7].3y4_1.heavy 500.283 / 602.363 5599.0 24.464099884033203 43 18 10 5 10 5.5460734211145795 18.03077464126021 0.045398712158203125 3 0.9862341318248038 10.5065734528641 5599.0 9.73807079002425 1.0 - - - - - - - 295.0 33 7 UBOX5 U-box domain containing 5 1429 181 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9259.[MT7]-QVTTAENLK[MT7].2y8_1.heavy 646.377 / 1019.59 12378.0 21.068225383758545 43 17 10 6 10 12.511284685498483 7.992784315419462 0.03809928894042969 3 0.9757536476143448 7.909658472840059 12378.0 88.06482213438736 0.0 - - - - - - - 253.0 24 6 ORC5 origin recognition complex, subunit 5 1431 181 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9259.[MT7]-QVTTAENLK[MT7].2y5_1.heavy 646.377 / 718.422 9094.0 21.068225383758545 43 17 10 6 10 12.511284685498483 7.992784315419462 0.03809928894042969 3 0.9757536476143448 7.909658472840059 9094.0 6.383256794294742 0.0 - - - - - - - 253.0 18 4 ORC5 origin recognition complex, subunit 5 1433 181 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9259.[MT7]-QVTTAENLK[MT7].2y3_1.heavy 646.377 / 518.342 5305.0 21.068225383758545 43 17 10 6 10 12.511284685498483 7.992784315419462 0.03809928894042969 3 0.9757536476143448 7.909658472840059 5305.0 7.3534653465346524 1.0 - - - - - - - 253.0 11 3 ORC5 origin recognition complex, subunit 5 1435 181 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9259.[MT7]-QVTTAENLK[MT7].2y7_1.heavy 646.377 / 920.517 13642.0 21.068225383758545 43 17 10 6 10 12.511284685498483 7.992784315419462 0.03809928894042969 3 0.9757536476143448 7.909658472840059 13642.0 76.61579540562752 0.0 - - - - - - - 253.0 27 7 ORC5 origin recognition complex, subunit 5 1437 182 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9254.[MT7]-ERPQDVDQR.2y4_1.heavy 643.832 / 517.273 12043.0 14.888299942016602 48 18 10 10 10 3.295931955462199 30.34043219074184 0.0 3 0.982761977269711 9.386264740541117 12043.0 72.94182965299684 0.0 - - - - - - - 316.8333333333333 24 6 AKT1 v-akt murine thymoma viral oncogene homolog 1 1439 182 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9254.[MT7]-ERPQDVDQR.2b7_1.heavy 643.832 / 984.487 49281.0 14.888299942016602 48 18 10 10 10 3.295931955462199 30.34043219074184 0.0 3 0.982761977269711 9.386264740541117 49281.0 372.8840784426544 0.0 - - - - - - - 248.85714285714286 98 7 AKT1 v-akt murine thymoma viral oncogene homolog 1 1441 182 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9254.[MT7]-ERPQDVDQR.2b5_1.heavy 643.832 / 770.391 12835.0 14.888299942016602 48 18 10 10 10 3.295931955462199 30.34043219074184 0.0 3 0.982761977269711 9.386264740541117 12835.0 106.09354563624251 0.0 - - - - - - - 285.0 25 5 AKT1 v-akt murine thymoma viral oncogene homolog 1 1443 182 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9254.[MT7]-ERPQDVDQR.2y7_1.heavy 643.832 / 857.411 5229.0 14.888299942016602 48 18 10 10 10 3.295931955462199 30.34043219074184 0.0 3 0.982761977269711 9.386264740541117 5229.0 57.58518987341772 0.0 - - - - - - - 158.0 10 6 AKT1 v-akt murine thymoma viral oncogene homolog 1 1445 183 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9393.[MT7]-ASVSGPNSPSETRR.3y6_1.heavy 530.277 / 745.395 4021.0 15.754799842834473 43 13 10 10 10 1.3467677084361247 48.47352034860152 0.0 3 0.9024411221308727 3.9186212857254183 4021.0 26.155505564197675 0.0 - - - - - - - 274.5 8 8 MID1 midline 1 (Opitz/BBB syndrome) 1447 183 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9393.[MT7]-ASVSGPNSPSETRR.3y11_2.heavy 530.277 / 594.292 7129.0 15.754799842834473 43 13 10 10 10 1.3467677084361247 48.47352034860152 0.0 3 0.9024411221308727 3.9186212857254183 7129.0 19.963881530610614 0.0 - - - - - - - 261.42857142857144 14 7 MID1 midline 1 (Opitz/BBB syndrome) 1449 183 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9393.[MT7]-ASVSGPNSPSETRR.3b5_1.heavy 530.277 / 546.3 10967.0 15.754799842834473 43 13 10 10 10 1.3467677084361247 48.47352034860152 0.0 3 0.9024411221308727 3.9186212857254183 10967.0 12.273745017996095 0.0 - - - - - - - 708.125 21 8 MID1 midline 1 (Opitz/BBB syndrome) 1451 183 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9393.[MT7]-ASVSGPNSPSETRR.3y13_2.heavy 530.277 / 687.342 12429.0 15.754799842834473 43 13 10 10 10 1.3467677084361247 48.47352034860152 0.0 3 0.9024411221308727 3.9186212857254183 12429.0 64.49185040535208 0.0 - - - - - - - 183.0 24 4 MID1 midline 1 (Opitz/BBB syndrome) 1453 184 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9392.[MT7]-MEVEELSPLALGR.2y9_1.heavy 794.43 / 955.557 3553.0 36.98295021057129 41 16 10 5 10 6.413098506725796 15.593086539232804 0.040302276611328125 3 0.9684002084550333 6.924205404238537 3553.0 15.852500000000001 1.0 - - - - - - - 243.83333333333334 7 6 CDC25B cell division cycle 25 homolog B (S. pombe) 1455 184 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9392.[MT7]-MEVEELSPLALGR.2y10_1.heavy 794.43 / 1084.6 9195.0 36.98295021057129 41 16 10 5 10 6.413098506725796 15.593086539232804 0.040302276611328125 3 0.9684002084550333 6.924205404238537 9195.0 44.58181818181818 0.0 - - - - - - - 209.0 18 7 CDC25B cell division cycle 25 homolog B (S. pombe) 1457 184 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9392.[MT7]-MEVEELSPLALGR.2b5_1.heavy 794.43 / 762.346 6688.0 36.98295021057129 41 16 10 5 10 6.413098506725796 15.593086539232804 0.040302276611328125 3 0.9684002084550333 6.924205404238537 6688.0 34.879999999999995 0.0 - - - - - - - 292.6 13 10 CDC25B cell division cycle 25 homolog B (S. pombe) 1459 184 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9392.[MT7]-MEVEELSPLALGR.2y7_1.heavy 794.43 / 713.43 7314.0 36.98295021057129 41 16 10 5 10 6.413098506725796 15.593086539232804 0.040302276611328125 3 0.9684002084550333 6.924205404238537 7314.0 22.326947368421052 0.0 - - - - - - - 325.1111111111111 14 9 CDC25B cell division cycle 25 homolog B (S. pombe) 1461 185 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9256.[MT7]-LIDIVSSQK[MT7].2y4_1.heavy 645.897 / 593.338 29550.0 31.387699127197266 47 17 10 10 10 3.0731420341508184 27.211881549663307 0.0 3 0.9768279294870477 8.091662091082354 29550.0 37.5308734939759 0.0 - - - - - - - 332.0 59 2 CHEK1 CHK1 checkpoint homolog (S. pombe) 1463 185 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9256.[MT7]-LIDIVSSQK[MT7].2y8_1.heavy 645.897 / 1033.6 17265.0 31.387699127197266 47 17 10 10 10 3.0731420341508184 27.211881549663307 0.0 3 0.9768279294870477 8.091662091082354 17265.0 24.4414156626506 0.0 - - - - - - - 332.0 34 4 CHEK1 CHK1 checkpoint homolog (S. pombe) 1465 185 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9256.[MT7]-LIDIVSSQK[MT7].2y5_1.heavy 645.897 / 692.406 32206.0 31.387699127197266 47 17 10 10 10 3.0731420341508184 27.211881549663307 0.0 3 0.9768279294870477 8.091662091082354 32206.0 47.98564658634538 0.0 - - - - - - - 332.0 64 3 CHEK1 CHK1 checkpoint homolog (S. pombe) 1467 185 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9256.[MT7]-LIDIVSSQK[MT7].2y7_1.heavy 645.897 / 920.517 14941.0 31.387699127197266 47 17 10 10 10 3.0731420341508184 27.211881549663307 0.0 3 0.9768279294870477 8.091662091082354 14941.0 42.11915685237724 1.0 - - - - - - - 332.0 32 4 CHEK1 CHK1 checkpoint homolog (S. pombe) 1469 186 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9394.[MT7]-LRETTPLTIEK[MT7].3y3_1.heavy 530.322 / 533.341 71855.0 26.366199493408203 47 17 10 10 10 3.4016861666069427 29.397185719735674 0.0 3 0.975894257254697 7.9327873716980495 71855.0 106.4103663289166 0.0 - - - - - - - 802.0 143 10 CCND3 cyclin D3 1471 186 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9394.[MT7]-LRETTPLTIEK[MT7].3b5_1.heavy 530.322 / 745.432 31757.0 26.366199493408203 47 17 10 10 10 3.4016861666069427 29.397185719735674 0.0 3 0.975894257254697 7.9327873716980495 31757.0 136.0307632398754 0.0 - - - - - - - 321.0 63 5 CCND3 cyclin D3 1473 186 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9394.[MT7]-LRETTPLTIEK[MT7].3y4_1.heavy 530.322 / 634.389 90139.0 26.366199493408203 47 17 10 10 10 3.4016861666069427 29.397185719735674 0.0 3 0.975894257254697 7.9327873716980495 90139.0 152.47909343032103 0.0 - - - - - - - 321.0 180 3 CCND3 cyclin D3 1475 186 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9394.[MT7]-LRETTPLTIEK[MT7].3b7_1.heavy 530.322 / 955.569 8340.0 26.366199493408203 47 17 10 10 10 3.4016861666069427 29.397185719735674 0.0 3 0.975894257254697 7.9327873716980495 8340.0 33.67177570093458 0.0 - - - - - - - 321.0 16 3 CCND3 cyclin D3 1477 187 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A88.[MT7]-AVQVVLR.2y5_1.heavy 464.807 / 614.398 36092.0 25.821500778198242 35 17 2 10 6 4.249100347544523 23.53439359411414 0.0 5 0.9797110243649457 8.649585187749182 36092.0 35.6268374764356 4.0 - - - - - - - 319.0 374 1 PIAS4 protein inhibitor of activated STAT, 4 1479 187 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A88.[MT7]-AVQVVLR.2b4_1.heavy 464.807 / 542.342 32898.0 25.821500778198242 35 17 2 10 6 4.249100347544523 23.53439359411414 0.0 5 0.9797110243649457 8.649585187749182 32898.0 71.00196553396773 0.0 - - - - - - - 319.0 65 8 PIAS4 protein inhibitor of activated STAT, 4 1481 187 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A88.[MT7]-AVQVVLR.2y6_1.heavy 464.807 / 713.467 59088.0 25.821500778198242 35 17 2 10 6 4.249100347544523 23.53439359411414 0.0 5 0.9797110243649457 8.649585187749182 59088.0 133.61840375586854 0.0 - - - - - - - 830.4 118 5 PIAS4 protein inhibitor of activated STAT, 4 1483 187 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A88.[MT7]-AVQVVLR.2b5_1.heavy 464.807 / 641.41 35453.0 25.821500778198242 35 17 2 10 6 4.249100347544523 23.53439359411414 0.0 5 0.9797110243649457 8.649585187749182 35453.0 177.82068965517243 0.0 - - - - - - - 319.0 70 1 PIAS4 protein inhibitor of activated STAT, 4 1485 188 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9396.[MT7]-GGEADNLDEFLK[MT7].2b8_1.heavy 798.411 / 916.413 10403.0 33.40999984741211 45 15 10 10 10 3.394174255771389 29.462246916156978 0.0 3 0.9575741218466423 5.970344912262133 10403.0 32.22478114478115 0.0 - - - - - - - 297.0 20 5 RAD21 RAD21 homolog (S. pombe) 1487 188 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9396.[MT7]-GGEADNLDEFLK[MT7].2y4_1.heavy 798.411 / 680.41 8917.0 33.40999984741211 45 15 10 10 10 3.394174255771389 29.462246916156978 0.0 3 0.9575741218466423 5.970344912262133 8917.0 13.52143912622055 0.0 - - - - - - - 297.0 17 2 RAD21 RAD21 homolog (S. pombe) 1489 188 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9396.[MT7]-GGEADNLDEFLK[MT7].2b6_1.heavy 798.411 / 688.302 2972.0 33.40999984741211 45 15 10 10 10 3.394174255771389 29.462246916156978 0.0 3 0.9575741218466423 5.970344912262133 2972.0 2.998624819858461 1.0 - - - - - - - 297.0 8 4 RAD21 RAD21 homolog (S. pombe) 1491 188 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9396.[MT7]-GGEADNLDEFLK[MT7].2b5_1.heavy 798.411 / 574.259 10998.0 33.40999984741211 45 15 10 10 10 3.394174255771389 29.462246916156978 0.0 3 0.9575741218466423 5.970344912262133 10998.0 13.319697224558453 0.0 - - - - - - - 297.0 21 6 RAD21 RAD21 homolog (S. pombe) 1493 189 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9251.[MT7]-EAQTLQQYR.2y8_1.heavy 640.839 / 1007.53 32886.0 21.90290069580078 48 18 10 10 10 4.441321415008255 22.515821453965664 0.0 3 0.9845313427899369 9.910022447391468 32886.0 134.59576524380694 0.0 - - - - - - - 259.0 65 4 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 1495 189 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9251.[MT7]-EAQTLQQYR.2y5_1.heavy 640.839 / 707.383 9581.0 21.90290069580078 48 18 10 10 10 4.441321415008255 22.515821453965664 0.0 3 0.9845313427899369 9.910022447391468 9581.0 17.861985659128514 0.0 - - - - - - - 582.75 19 8 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 1497 189 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9251.[MT7]-EAQTLQQYR.2y6_1.heavy 640.839 / 808.431 20716.0 21.90290069580078 48 18 10 10 10 4.441321415008255 22.515821453965664 0.0 3 0.9845313427899369 9.910022447391468 20716.0 52.38988416988416 0.0 - - - - - - - 259.0 41 8 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 1499 189 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9251.[MT7]-EAQTLQQYR.2y7_1.heavy 640.839 / 936.49 9322.0 21.90290069580078 48 18 10 10 10 4.441321415008255 22.515821453965664 0.0 3 0.9845313427899369 9.910022447391468 9322.0 27.354131274131273 0.0 - - - - - - - 259.0 18 4 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 1501 190 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A89.[MT7]-RLEAFLTQK[MT7].3y3_1.heavy 465.285 / 520.321 252000.0 29.365999221801758 42 12 10 10 10 1.5523331153420794 53.351476049063486 0.0 3 0.8965757219716144 3.8039517958109323 252000.0 435.1977869805212 0.0 - - - - - - - 333.0 504 2 MAP2K1;MAP2K2 mitogen-activated protein kinase kinase 1;mitogen-activated protein kinase kinase 2 1503 190 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A89.[MT7]-RLEAFLTQK[MT7].3b4_1.heavy 465.285 / 614.374 84667.0 29.365999221801758 42 12 10 10 10 1.5523331153420794 53.351476049063486 0.0 3 0.8965757219716144 3.8039517958109323 84667.0 50.04066105610561 0.0 - - - - - - - 333.0 169 2 MAP2K1;MAP2K2 mitogen-activated protein kinase kinase 1;mitogen-activated protein kinase kinase 2 1505 190 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A89.[MT7]-RLEAFLTQK[MT7].3b5_1.heavy 465.285 / 761.443 143667.0 29.365999221801758 42 12 10 10 10 1.5523331153420794 53.351476049063486 0.0 3 0.8965757219716144 3.8039517958109323 143667.0 273.0629573012465 0.0 - - - - - - - 333.0 287 2 MAP2K1;MAP2K2 mitogen-activated protein kinase kinase 1;mitogen-activated protein kinase kinase 2 1507 190 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A89.[MT7]-RLEAFLTQK[MT7].3b3_1.heavy 465.285 / 543.337 42333.0 29.365999221801758 42 12 10 10 10 1.5523331153420794 53.351476049063486 0.0 3 0.8965757219716144 3.8039517958109323 42333.0 96.91400950524738 0.0 - - - - - - - 333.0 84 4 MAP2K1;MAP2K2 mitogen-activated protein kinase kinase 1;mitogen-activated protein kinase kinase 2 1509 191 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9398.[MT7]-LVQYLEIVPETR.2y8_1.heavy 802.462 / 956.541 31463.0 38.238399505615234 45 15 10 10 10 1.9669497258081698 34.26515604152209 0.0 3 0.9522099849694904 5.622750999133808 31463.0 177.71022643575378 0.0 - - - - - - - 259.0 62 5 FBXW8 F-box and WD repeat domain containing 8 1511 191 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9398.[MT7]-LVQYLEIVPETR.2b4_1.heavy 802.462 / 648.384 36830.0 38.238399505615234 45 15 10 10 10 1.9669497258081698 34.26515604152209 0.0 3 0.9522099849694904 5.622750999133808 36830.0 110.25817689237857 0.0 - - - - - - - 687.1428571428571 73 7 FBXW8 F-box and WD repeat domain containing 8 1513 191 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9398.[MT7]-LVQYLEIVPETR.2y9_1.heavy 802.462 / 1119.6 24985.0 38.238399505615234 45 15 10 10 10 1.9669497258081698 34.26515604152209 0.0 3 0.9522099849694904 5.622750999133808 24985.0 66.62666666666667 0.0 - - - - - - - 208.125 49 8 FBXW8 F-box and WD repeat domain containing 8 1515 191 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9398.[MT7]-LVQYLEIVPETR.2y10_1.heavy 802.462 / 1247.66 27021.0 38.238399505615234 45 15 10 10 10 1.9669497258081698 34.26515604152209 0.0 3 0.9522099849694904 5.622750999133808 27021.0 203.0226486486486 0.0 - - - - - - - 231.25 54 8 FBXW8 F-box and WD repeat domain containing 8 1517 192 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9636.[MT7]-ALSAFK[MT7].2y4_1.heavy 462.791 / 596.352 111268.0 26.896799087524414 50 20 10 10 10 30.69079550857993 3.258305897351014 0.0 3 0.9997575796076785 79.2627290157158 111268.0 159.8685249798269 0.0 - - - - - - - 328.0 222 5 POLE2 polymerase (DNA directed), epsilon 2 (p59 subunit) 1519 192 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9636.[MT7]-ALSAFK[MT7].2y5_1.heavy 462.791 / 709.437 74179.0 26.896799087524414 50 20 10 10 10 30.69079550857993 3.258305897351014 0.0 3 0.9997575796076785 79.2627290157158 74179.0 137.5626073421571 0.0 - - - - - - - 328.0 148 1 POLE2 polymerase (DNA directed), epsilon 2 (p59 subunit) 1521 192 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9636.[MT7]-ALSAFK[MT7].2y3_1.heavy 462.791 / 509.32 50218.0 26.896799087524414 50 20 10 10 10 30.69079550857993 3.258305897351014 0.0 3 0.9997575796076785 79.2627290157158 50218.0 85.2782447450524 0.0 - - - - - - - 328.0 100 2 POLE2 polymerase (DNA directed), epsilon 2 (p59 subunit) 1523 192 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9636.[MT7]-ALSAFK[MT7].2b5_1.heavy 462.791 / 634.368 5580.0 26.896799087524414 50 20 10 10 10 30.69079550857993 3.258305897351014 0.0 3 0.9997575796076785 79.2627290157158 5580.0 0.7611035883547732 3.0 - - - - - - - 328.0 70 4 POLE2 polymerase (DNA directed), epsilon 2 (p59 subunit) 1525 193 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A403.[MT7]-DAQQSSSPAADNLR.2b4_1.heavy 802.393 / 587.291 8095.0 18.643999099731445 43 13 10 10 10 1.1035088102263342 54.17284655358331 0.0 3 0.9283106914066758 4.581480699598719 8095.0 33.45933333333333 0.0 - - - - - - - 375.0 16 6 UBE4A ubiquitination factor E4A (UFD2 homolog, yeast) 1527 193 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A403.[MT7]-DAQQSSSPAADNLR.2y9_1.heavy 802.393 / 930.464 4722.0 18.643999099731445 43 13 10 10 10 1.1035088102263342 54.17284655358331 0.0 3 0.9283106914066758 4.581480699598719 4722.0 20.811648134420558 1.0 - - - - - - - 337.5 10 2 UBE4A ubiquitination factor E4A (UFD2 homolog, yeast) 1529 193 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A403.[MT7]-DAQQSSSPAADNLR.2y10_1.heavy 802.393 / 1017.5 13491.0 18.643999099731445 43 13 10 10 10 1.1035088102263342 54.17284655358331 0.0 3 0.9283106914066758 4.581480699598719 13491.0 113.924 0.0 - - - - - - - 225.0 26 4 UBE4A ubiquitination factor E4A (UFD2 homolog, yeast) 1531 193 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A403.[MT7]-DAQQSSSPAADNLR.2y7_1.heavy 802.393 / 756.4 7870.0 18.643999099731445 43 13 10 10 10 1.1035088102263342 54.17284655358331 0.0 3 0.9283106914066758 4.581480699598719 7870.0 64.3591111111111 0.0 - - - - - - - 257.14285714285717 15 7 UBE4A ubiquitination factor E4A (UFD2 homolog, yeast) 1533 194 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A404.[MT7]-LVQYLEIVPETR.3y7_1.heavy 535.311 / 843.457 5666.0 38.24827480316162 42 16 10 6 10 2.445227326224851 40.895993156754244 0.039501190185546875 3 0.9619337482585049 6.305288053863242 5666.0 45.204153005464484 0.0 - - - - - - - 274.5 11 2 FBXW8 F-box and WD repeat domain containing 8 1535 194 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A404.[MT7]-LVQYLEIVPETR.3b6_1.heavy 535.311 / 890.51 10967.0 38.24827480316162 42 16 10 6 10 2.445227326224851 40.895993156754244 0.039501190185546875 3 0.9619337482585049 6.305288053863242 10967.0 87.49628415300546 0.0 - - - - - - - 244.0 21 6 FBXW8 F-box and WD repeat domain containing 8 1537 194 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A404.[MT7]-LVQYLEIVPETR.3b4_1.heavy 535.311 / 648.384 11515.0 38.24827480316162 42 16 10 6 10 2.445227326224851 40.895993156754244 0.039501190185546875 3 0.9619337482585049 6.305288053863242 11515.0 82.04626959435204 0.0 - - - - - - - 297.375 23 8 FBXW8 F-box and WD repeat domain containing 8 1539 194 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A404.[MT7]-LVQYLEIVPETR.3y5_1.heavy 535.311 / 601.33 10235.0 38.24827480316162 42 16 10 6 10 2.445227326224851 40.895993156754244 0.039501190185546875 3 0.9619337482585049 6.305288053863242 10235.0 30.768576495260298 0.0 - - - - - - - 335.5 20 6 FBXW8 F-box and WD repeat domain containing 8 1541 195 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9644.[MT7]-FVYNSER.2b3_1.heavy 529.773 / 554.31 5829.0 23.517499923706055 33 20 2 5 6 3.627247324084825 20.531338649099542 0.04380035400390625 5 0.9936768292603527 15.51192893321023 5829.0 8.818908060521506 0.0 - - - - - - - 634.4285714285714 11 7 POLE2 polymerase (DNA directed), epsilon 2 (p59 subunit) 1543 195 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9644.[MT7]-FVYNSER.2y4_1.heavy 529.773 / 505.237 4719.0 23.517499923706055 33 20 2 5 6 3.627247324084825 20.531338649099542 0.04380035400390625 5 0.9936768292603527 15.51192893321023 4719.0 2.522738483469703 3.0 - - - - - - - 278.0 11 2 POLE2 polymerase (DNA directed), epsilon 2 (p59 subunit) 1545 195 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9644.[MT7]-FVYNSER.2y6_1.heavy 529.773 / 767.368 23038.0 23.517499923706055 33 20 2 5 6 3.627247324084825 20.531338649099542 0.04380035400390625 5 0.9936768292603527 15.51192893321023 23038.0 28.61707812376027 0.0 - - - - - - - 278.0 46 4 POLE2 polymerase (DNA directed), epsilon 2 (p59 subunit) 1547 195 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9644.[MT7]-FVYNSER.2b5_1.heavy 529.773 / 755.385 3331.0 23.517499923706055 33 20 2 5 6 3.627247324084825 20.531338649099542 0.04380035400390625 5 0.9936768292603527 15.51192893321023 3331.0 11.208098470226037 3.0 - - - - - - - 278.0 119 6 POLE2 polymerase (DNA directed), epsilon 2 (p59 subunit) 1549 196 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A92.[MT7]-VAPETK[MT7].2y4_1.heavy 466.786 / 618.358 85526.0 16.441299438476562 44 14 10 10 10 1.3915462197688913 56.77985345486622 0.0 3 0.9398154683190088 5.0051527513634895 85526.0 182.05007143719692 0.0 - - - - - - - 391.0 171 5 PPIL2;CPZ peptidylprolyl isomerase (cyclophilin)-like 2;carboxypeptidase Z 1551 196 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A92.[MT7]-VAPETK[MT7].2y5_1.heavy 466.786 / 689.395 68148.0 16.441299438476562 44 14 10 10 10 1.3915462197688913 56.77985345486622 0.0 3 0.9398154683190088 5.0051527513634895 68148.0 124.29707035261522 0.0 - - - - - - - 312.6 136 5 PPIL2;CPZ peptidylprolyl isomerase (cyclophilin)-like 2;carboxypeptidase Z 1553 196 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A92.[MT7]-VAPETK[MT7].2y3_1.heavy 466.786 / 521.305 4882.0 16.441299438476562 44 14 10 10 10 1.3915462197688913 56.77985345486622 0.0 3 0.9398154683190088 5.0051527513634895 4882.0 14.265331451320394 0.0 - - - - - - - 358.3333333333333 9 6 PPIL2;CPZ peptidylprolyl isomerase (cyclophilin)-like 2;carboxypeptidase Z 1555 196 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A92.[MT7]-VAPETK[MT7].2y2_1.heavy 466.786 / 392.263 28118.0 16.441299438476562 44 14 10 10 10 1.3915462197688913 56.77985345486622 0.0 3 0.9398154683190088 5.0051527513634895 28118.0 38.333511600162566 0.0 - - - - - - - 737.6666666666666 56 9 PPIL2;CPZ peptidylprolyl isomerase (cyclophilin)-like 2;carboxypeptidase Z 1557 197 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A96.[MT7]-LLQFK[MT7].2b3_1.heavy 468.81 / 499.336 1647.0 30.261999130249023 35 5 10 10 10 0.2965915977039331 136.9895402119564 0.0 3 0.6072618559389871 1.9008436168003517 1647.0 2.9740971168437023 10.0 - - - - - - - 329.0 30 5 UBR5;LOC730429 ubiquitin protein ligase E3 component n-recognin 5;e3 ubiquitin-protein ligase UBR5-like 1559 197 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A96.[MT7]-LLQFK[MT7].2y4_1.heavy 468.81 / 679.426 224334.0 30.261999130249023 35 5 10 10 10 0.2965915977039331 136.9895402119564 0.0 3 0.6072618559389871 1.9008436168003517 224334.0 747.2451055192918 0.0 - - - - - - - 878.3333333333334 448 9 UBR5;LOC730429 ubiquitin protein ligase E3 component n-recognin 5;e3 ubiquitin-protein ligase UBR5-like 1561 197 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A96.[MT7]-LLQFK[MT7].2y3_1.heavy 468.81 / 566.342 403867.0 30.261999130249023 35 5 10 10 10 0.2965915977039331 136.9895402119564 0.0 3 0.6072618559389871 1.9008436168003517 403867.0 661.891337167826 0.0 - - - - - - - 329.0 807 2 UBR5;LOC730429 ubiquitin protein ligase E3 component n-recognin 5;e3 ubiquitin-protein ligase UBR5-like 1563 197 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A96.[MT7]-LLQFK[MT7].2y1_1.heavy 468.81 / 291.215 64566.0 30.261999130249023 35 5 10 10 10 0.2965915977039331 136.9895402119564 0.0 3 0.6072618559389871 1.9008436168003517 64566.0 19.31234049632206 0.0 - - - - - - - 659.0 129 1 UBR5;LOC730429 ubiquitin protein ligase E3 component n-recognin 5;e3 ubiquitin-protein ligase UBR5-like 1565 198 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A409.[MT7]-QGLANVVSLEWLR.3b6_1.heavy 543.646 / 727.422 13040.0 42.214250564575195 44 18 10 6 10 4.303909093562006 23.234691492342346 0.035701751708984375 3 0.9845372632633849 9.911924391005622 13040.0 159.40565339647773 0.0 - - - - - - - 221.0 26 10 UBE3C ubiquitin protein ligase E3C 1567 198 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A409.[MT7]-QGLANVVSLEWLR.3y6_1.heavy 543.646 / 803.441 25148.0 42.214250564575195 44 18 10 6 10 4.303909093562006 23.234691492342346 0.035701751708984375 3 0.9845372632633849 9.911924391005622 25148.0 240.0666998459533 0.0 - - - - - - - 222.91666666666666 50 12 UBE3C ubiquitin protein ligase E3C 1569 198 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A409.[MT7]-QGLANVVSLEWLR.3b4_1.heavy 543.646 / 514.311 5938.0 42.214250564575195 44 18 10 6 10 4.303909093562006 23.234691492342346 0.035701751708984375 3 0.9845372632633849 9.911924391005622 5938.0 5.446494992846923 1.0 - - - - - - - 203.58333333333334 11 12 UBE3C ubiquitin protein ligase E3C 1571 198 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A409.[MT7]-QGLANVVSLEWLR.3b5_1.heavy 543.646 / 628.354 27476.0 42.214250564575195 44 18 10 6 10 4.303909093562006 23.234691492342346 0.035701751708984375 3 0.9845372632633849 9.911924391005622 27476.0 61.20246273879265 0.0 - - - - - - - 247.375 54 8 UBE3C ubiquitin protein ligase E3C 1573 199 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A408.[MT7]-NLLSLFEDTLDPT.2b8_1.heavy 811.426 / 1076.57 5932.0 52.25550079345703 44 14 10 10 10 1.7277529297676735 47.53859846742488 0.0 3 0.9306661736618954 4.6595930751131025 5932.0 351.64468468468465 0.0 - - - - - - - 132.0 11 20 PKMYT1 protein kinase, membrane associated tyrosine/threonine 1 1575 199 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A408.[MT7]-NLLSLFEDTLDPT.2b4_1.heavy 811.426 / 572.352 8335.0 52.25550079345703 44 14 10 10 10 1.7277529297676735 47.53859846742488 0.0 3 0.9306661736618954 4.6595930751131025 8335.0 129.0222099408115 0.0 - - - - - - - 163.1 16 20 PKMYT1 protein kinase, membrane associated tyrosine/threonine 1 1577 199 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A408.[MT7]-NLLSLFEDTLDPT.2b6_1.heavy 811.426 / 832.505 7919.0 52.25550079345703 44 14 10 10 10 1.7277529297676735 47.53859846742488 0.0 3 0.9306661736618954 4.6595930751131025 7919.0 121.88422253422254 0.0 - - - - - - - 173.33333333333334 15 21 PKMYT1 protein kinase, membrane associated tyrosine/threonine 1 1579 199 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A408.[MT7]-NLLSLFEDTLDPT.2b5_1.heavy 811.426 / 685.437 10931.0 52.25550079345703 44 14 10 10 10 1.7277529297676735 47.53859846742488 0.0 3 0.9306661736618954 4.6595930751131025 10931.0 101.57662162162163 0.0 - - - - - - - 189.35 21 20 PKMYT1 protein kinase, membrane associated tyrosine/threonine 1 1581 200 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A405.[MT7]-RVFDPALNLFK[MT7].2b8_1.heavy 804.479 / 1057.59 961.0 35.78785037994385 37 16 10 5 6 3.4060398291789196 29.359609697842732 0.040599822998046875 5 0.9633991175721719 6.431066232808777 961.0 1.2004175329175326 1.0 - - - - - - - 0.0 1 0 UBE3B ubiquitin protein ligase E3B 1583 200 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A405.[MT7]-RVFDPALNLFK[MT7].2y4_1.heavy 804.479 / 665.41 1442.0 35.78785037994385 37 16 10 5 6 3.4060398291789196 29.359609697842732 0.040599822998046875 5 0.9633991175721719 6.431066232808777 1442.0 7.2050034650034664 4.0 - - - - - - - 415.27272727272725 3 11 UBE3B ubiquitin protein ligase E3B 1585 200 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A405.[MT7]-RVFDPALNLFK[MT7].2b4_1.heavy 804.479 / 662.374 30285.0 35.78785037994385 37 16 10 5 6 3.4060398291789196 29.359609697842732 0.040599822998046875 5 0.9633991175721719 6.431066232808777 30285.0 151.32006237006237 0.0 - - - - - - - 360.5 60 10 UBE3B ubiquitin protein ligase E3B 1587 200 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A405.[MT7]-RVFDPALNLFK[MT7].2y7_1.heavy 804.479 / 946.584 19228.0 35.78785037994385 37 16 10 5 6 3.4060398291789196 29.359609697842732 0.040599822998046875 5 0.9633991175721719 6.431066232808777 19228.0 37.61565036420395 0.0 - - - - - - - 343.2857142857143 38 7 UBE3B ubiquitin protein ligase E3B 1589 201 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A406.[MT7]-RVFDPALNLFK[MT7].3y3_1.heavy 536.655 / 551.367 137788.0 35.79800033569336 43 13 10 10 10 1.3806329186751256 49.96091214598252 0.0 3 0.9255294538561113 4.494044310290096 137788.0 568.8041100074763 0.0 - - - - - - - 320.0 275 6 UBE3B ubiquitin protein ligase E3B 1591 201 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A406.[MT7]-RVFDPALNLFK[MT7].3b6_1.heavy 536.655 / 830.464 151711.0 35.79800033569336 43 13 10 10 10 1.3806329186751256 49.96091214598252 0.0 3 0.9255294538561113 4.494044310290096 151711.0 636.3287335705195 0.0 - - - - - - - 300.0 303 4 UBE3B ubiquitin protein ligase E3B 1593 201 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A406.[MT7]-RVFDPALNLFK[MT7].3b4_1.heavy 536.655 / 662.374 228767.0 35.79800033569336 43 13 10 10 10 1.3806329186751256 49.96091214598252 0.0 3 0.9255294538561113 4.494044310290096 228767.0 969.0570649369431 0.0 - - - - - - - 400.0 457 3 UBE3B ubiquitin protein ligase E3B 1595 201 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A406.[MT7]-RVFDPALNLFK[MT7].3y4_1.heavy 536.655 / 665.41 162273.0 35.79800033569336 43 13 10 10 10 1.3806329186751256 49.96091214598252 0.0 3 0.9255294538561113 4.494044310290096 162273.0 725.7209166666667 0.0 - - - - - - - 377.14285714285717 324 7 UBE3B ubiquitin protein ligase E3B 1597 202 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9249.[MT7]-DDTDPGQLK[MT7].2y4_1.heavy 638.835 / 589.379 4759.0 19.70159912109375 45 15 10 10 10 2.585225851844316 29.90328950501896 0.0 3 0.9506736294523157 5.533771745186832 4759.0 15.196806722689074 1.0 - - - - - - - 370.22222222222223 9 9 ORC5 origin recognition complex, subunit 5 1599 202 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9249.[MT7]-DDTDPGQLK[MT7].2y5_1.heavy 638.835 / 686.432 102548.0 19.70159912109375 45 15 10 10 10 2.585225851844316 29.90328950501896 0.0 3 0.9506736294523157 5.533771745186832 102548.0 225.7599369329683 0.0 - - - - - - - 374.0 205 7 ORC5 origin recognition complex, subunit 5 1601 202 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9249.[MT7]-DDTDPGQLK[MT7].2b4_1.heavy 638.835 / 591.238 151324.0 19.70159912109375 45 15 10 10 10 2.585225851844316 29.90328950501896 0.0 3 0.9506736294523157 5.533771745186832 151324.0 158.96491662864796 0.0 - - - - - - - 238.0 302 1 ORC5 origin recognition complex, subunit 5 1603 202 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9249.[MT7]-DDTDPGQLK[MT7].2b7_1.heavy 638.835 / 873.371 4283.0 19.70159912109375 45 15 10 10 10 2.585225851844316 29.90328950501896 0.0 3 0.9506736294523157 5.533771745186832 4283.0 18.895588235294113 0.0 - - - - - - - 297.5 8 4 ORC5 origin recognition complex, subunit 5 1605 203 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9248.[MT7]-VQTQIEEER.2y8_1.heavy 638.337 / 1032.5 48756.0 20.94420051574707 50 20 10 10 10 10.60584458435872 9.42876347136728 0.0 3 0.9966615060983199 21.353357837570982 48756.0 49.81827178750897 0.0 - - - - - - - 642.8571428571429 97 7 SMC1B structural maintenance of chromosomes 1B 1607 203 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9248.[MT7]-VQTQIEEER.2b4_1.heavy 638.337 / 601.343 12002.0 20.94420051574707 50 20 10 10 10 10.60584458435872 9.42876347136728 0.0 3 0.9966615060983199 21.353357837570982 12002.0 29.524919999999998 0.0 - - - - - - - 250.0 24 6 SMC1B structural maintenance of chromosomes 1B 1609 203 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9248.[MT7]-VQTQIEEER.2y6_1.heavy 638.337 / 803.389 8251.0 20.94420051574707 50 20 10 10 10 10.60584458435872 9.42876347136728 0.0 3 0.9966615060983199 21.353357837570982 8251.0 15.401866666666665 0.0 - - - - - - - 687.5 16 8 SMC1B structural maintenance of chromosomes 1B 1611 203 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9248.[MT7]-VQTQIEEER.2y7_1.heavy 638.337 / 904.437 23753.0 20.94420051574707 50 20 10 10 10 10.60584458435872 9.42876347136728 0.0 3 0.9966615060983199 21.353357837570982 23753.0 86.821129609709 0.0 - - - - - - - 250.0 47 7 SMC1B structural maintenance of chromosomes 1B 1613 204 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9384.[MT7]-LIQMRPFLENR.3y10_2.heavy 520.965 / 652.351 39830.0 33.661399841308594 43 13 10 10 10 2.290270579478916 43.662963186975084 0.0 3 0.9046949708312095 3.96545801262417 39830.0 66.76783372609775 0.0 - - - - - - - 297.0 79 2 POLD2 polymerase (DNA directed), delta 2, regulatory subunit 50kDa 1615 204 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9384.[MT7]-LIQMRPFLENR.3y6_1.heavy 520.965 / 775.41 43397.0 33.661399841308594 43 13 10 10 10 2.290270579478916 43.662963186975084 0.0 3 0.9046949708312095 3.96545801262417 43397.0 165.5744086758988 0.0 - - - - - - - 297.0 86 5 POLD2 polymerase (DNA directed), delta 2, regulatory subunit 50kDa 1617 204 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9384.[MT7]-LIQMRPFLENR.3y4_1.heavy 520.965 / 531.289 11592.0 33.661399841308594 43 13 10 10 10 2.290270579478916 43.662963186975084 0.0 3 0.9046949708312095 3.96545801262417 11592.0 58.486909090909094 0.0 - - - - - - - 297.0 23 5 POLD2 polymerase (DNA directed), delta 2, regulatory subunit 50kDa 1619 204 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9384.[MT7]-LIQMRPFLENR.3y5_1.heavy 520.965 / 678.357 8917.0 33.661399841308594 43 13 10 10 10 2.290270579478916 43.662963186975084 0.0 3 0.9046949708312095 3.96545801262417 8917.0 58.24572390572391 0.0 - - - - - - - 297.0 17 5 POLD2 polymerase (DNA directed), delta 2, regulatory subunit 50kDa 1621 205 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9245.[MT7]-YLGC[CAM]IEVLR.2y8_1.heavy 633.853 / 959.534 73082.0 35.03689956665039 50 20 10 10 10 12.828945030431955 7.794873215434844 0.0 3 0.990893844899775 12.923041347775188 73082.0 319.85566587106047 0.0 - - - - - - - 255.0 146 7 SHC3 SHC (Src homology 2 domain containing) transforming protein 3 1623 205 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9245.[MT7]-YLGC[CAM]IEVLR.2b4_1.heavy 633.853 / 638.309 11459.0 35.03689956665039 50 20 10 10 10 12.828945030431955 7.794873215434844 0.0 3 0.990893844899775 12.923041347775188 11459.0 56.66155244809123 0.0 - - - - - - - 255.0 22 6 SHC3 SHC (Src homology 2 domain containing) transforming protein 3 1625 205 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9245.[MT7]-YLGC[CAM]IEVLR.2b6_1.heavy 633.853 / 880.435 22918.0 35.03689956665039 50 20 10 10 10 12.828945030431955 7.794873215434844 0.0 3 0.990893844899775 12.923041347775188 22918.0 73.4780278237793 0.0 - - - - - - - 618.2857142857143 45 7 SHC3 SHC (Src homology 2 domain containing) transforming protein 3 1627 205 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9245.[MT7]-YLGC[CAM]IEVLR.2y7_1.heavy 633.853 / 846.45 58822.0 35.03689956665039 50 20 10 10 10 12.828945030431955 7.794873215434844 0.0 3 0.990893844899775 12.923041347775188 58822.0 67.76276594432083 0.0 - - - - - - - 255.0 117 2 SHC3 SHC (Src homology 2 domain containing) transforming protein 3 1629 206 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9244.[MT7]-DSGPLFNTDYDILK[MT7].3y3_1.heavy 629.331 / 517.383 15047.0 37.242401123046875 50 20 10 10 10 5.5583376659584305 13.896179909490696 0.0 3 0.9954555284508125 18.30020978143922 15047.0 17.998803827751196 0.0 - - - - - - - 313.5 30 2 POLD3 polymerase (DNA-directed), delta 3, accessory subunit 1631 206 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9244.[MT7]-DSGPLFNTDYDILK[MT7].3b5_1.heavy 629.331 / 614.327 34065.0 37.242401123046875 50 20 10 10 10 5.5583376659584305 13.896179909490696 0.0 3 0.9954555284508125 18.30020978143922 34065.0 28.569894053315107 0.0 - - - - - - - 1343.5714285714287 68 7 POLD3 polymerase (DNA-directed), delta 3, accessory subunit 1633 206 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9244.[MT7]-DSGPLFNTDYDILK[MT7].3y4_1.heavy 629.331 / 632.41 15674.0 37.242401123046875 50 20 10 10 10 5.5583376659584305 13.896179909490696 0.0 3 0.9954555284508125 18.30020978143922 15674.0 32.13544976076555 0.0 - - - - - - - 328.42857142857144 31 7 POLD3 polymerase (DNA-directed), delta 3, accessory subunit 1635 206 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9244.[MT7]-DSGPLFNTDYDILK[MT7].3y5_1.heavy 629.331 / 795.473 8777.0 37.242401123046875 50 20 10 10 10 5.5583376659584305 13.896179909490696 0.0 3 0.9954555284508125 18.30020978143922 8777.0 12.437029671059786 1.0 - - - - - - - 287.375 21 8 POLD3 polymerase (DNA-directed), delta 3, accessory subunit 1637 207 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9382.[MT7]-NSLEDLTAEDFR.2y8_1.heavy 777.382 / 966.453 6143.0 33.710601806640625 45 15 10 10 10 1.974941052169722 42.17297757231612 0.0 3 0.9523375696392277 5.630332500609747 6143.0 16.440355791133697 0.0 - - - - - - - 293.0 12 3 UBR5;LOC730429 ubiquitin protein ligase E3 component n-recognin 5;e3 ubiquitin-protein ligase UBR5-like 1639 207 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9382.[MT7]-NSLEDLTAEDFR.2b4_1.heavy 777.382 / 588.311 9653.0 33.710601806640625 45 15 10 10 10 1.974941052169722 42.17297757231612 0.0 3 0.9523375696392277 5.630332500609747 9653.0 23.701842727255027 0.0 - - - - - - - 293.0 19 7 UBR5;LOC730429 ubiquitin protein ligase E3 component n-recognin 5;e3 ubiquitin-protein ligase UBR5-like 1641 207 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9382.[MT7]-NSLEDLTAEDFR.2b5_1.heavy 777.382 / 703.338 14625.0 33.710601806640625 45 15 10 10 10 1.974941052169722 42.17297757231612 0.0 3 0.9523375696392277 5.630332500609747 14625.0 9.208114263069671 1.0 - - - - - - - 293.0 31 3 UBR5;LOC730429 ubiquitin protein ligase E3 component n-recognin 5;e3 ubiquitin-protein ligase UBR5-like 1643 207 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9382.[MT7]-NSLEDLTAEDFR.2y7_1.heavy 777.382 / 851.426 10530.0 33.710601806640625 45 15 10 10 10 1.974941052169722 42.17297757231612 0.0 3 0.9523375696392277 5.630332500609747 10530.0 51.42225255972696 0.0 - - - - - - - 293.0 21 6 UBR5;LOC730429 ubiquitin protein ligase E3 component n-recognin 5;e3 ubiquitin-protein ligase UBR5-like 1645 208 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9243.[MT7]-VTQNSSAEK[MT7].2y4_1.heavy 626.343 / 578.327 3332.0 14.785599708557129 45 20 10 5 10 7.933927914258057 12.604097375310161 0.040599822998046875 3 0.9934620289661491 15.254710583513864 3332.0 5.584701871761979 0.0 - - - - - - - 733.75 6 8 SMC1B structural maintenance of chromosomes 1B 1647 208 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9243.[MT7]-VTQNSSAEK[MT7].2y8_1.heavy 626.343 / 1008.51 15234.0 14.785599708557129 45 20 10 5 10 7.933927914258057 12.604097375310161 0.040599822998046875 3 0.9934620289661491 15.254710583513864 15234.0 63.39430578293199 0.0 - - - - - - - 181.57142857142858 30 7 SMC1B structural maintenance of chromosomes 1B 1649 208 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9243.[MT7]-VTQNSSAEK[MT7].2y5_1.heavy 626.343 / 665.359 6189.0 14.785599708557129 45 20 10 5 10 7.933927914258057 12.604097375310161 0.040599822998046875 3 0.9934620289661491 15.254710583513864 6189.0 14.233742631380911 0.0 - - - - - - - 277.625 12 8 SMC1B structural maintenance of chromosomes 1B 1651 208 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9243.[MT7]-VTQNSSAEK[MT7].2y6_1.heavy 626.343 / 779.402 8569.0 14.785599708557129 45 20 10 5 10 7.933927914258057 12.604097375310161 0.040599822998046875 3 0.9934620289661491 15.254710583513864 8569.0 18.122210961253607 0.0 - - - - - - - 290.8333333333333 17 6 SMC1B structural maintenance of chromosomes 1B 1653 209 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9242.[MT7]-ELIFEETAR.2b3_1.heavy 626.339 / 500.32 94811.0 31.58810043334961 45 15 10 10 10 2.039008692942282 38.994384446527604 0.0 3 0.9501510881237698 5.504447301988071 94811.0 106.42665261046915 0.0 - - - - - - - 332.0 189 3 MAPK1 mitogen-activated protein kinase 1 1655 209 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9242.[MT7]-ELIFEETAR.2y8_1.heavy 626.339 / 978.526 101109.0 31.58810043334961 45 15 10 10 10 2.039008692942282 38.994384446527604 0.0 3 0.9501510881237698 5.504447301988071 101109.0 152.19700247087624 0.0 - - - - - - - 332.0 202 1 MAPK1 mitogen-activated protein kinase 1 1657 209 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9242.[MT7]-ELIFEETAR.2y6_1.heavy 626.339 / 752.357 125641.0 31.58810043334961 45 15 10 10 10 2.039008692942282 38.994384446527604 0.0 3 0.9501510881237698 5.504447301988071 125641.0 146.68102242068812 0.0 - - - - - - - 332.0 251 3 MAPK1 mitogen-activated protein kinase 1 1659 209 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9242.[MT7]-ELIFEETAR.2y7_1.heavy 626.339 / 865.441 84534.0 31.58810043334961 45 15 10 10 10 2.039008692942282 38.994384446527604 0.0 3 0.9501510881237698 5.504447301988071 84534.0 148.01554801752386 0.0 - - - - - - - 805.2857142857143 169 7 MAPK1 mitogen-activated protein kinase 1 1661 210 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9381.[MT7]-GFVQIWDAAAGK[MT7].2y8_1.heavy 775.932 / 975.538 8572.0 38.40119934082031 46 16 10 10 10 1.8317798150636486 43.269381136730715 0.0 3 0.9623700437964996 6.341969452470138 8572.0 59.27206493931175 0.0 - - - - - - - 237.0 17 11 FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 1663 210 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9381.[MT7]-GFVQIWDAAAGK[MT7].2y5_1.heavy 775.932 / 561.348 16212.0 38.40119934082031 46 16 10 10 10 1.8317798150636486 43.269381136730715 0.0 3 0.9623700437964996 6.341969452470138 16212.0 20.255409395973153 1.0 - - - - - - - 825.2857142857143 32 7 FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 1665 210 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9381.[MT7]-GFVQIWDAAAGK[MT7].2b4_1.heavy 775.932 / 576.326 30560.0 38.40119934082031 46 16 10 10 10 1.8317798150636486 43.269381136730715 0.0 3 0.9623700437964996 6.341969452470138 30560.0 52.6899383479082 0.0 - - - - - - - 798.5714285714286 61 7 FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 1667 210 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9381.[MT7]-GFVQIWDAAAGK[MT7].2y7_1.heavy 775.932 / 862.454 25529.0 38.40119934082031 46 16 10 10 10 1.8317798150636486 43.269381136730715 0.0 3 0.9623700437964996 6.341969452470138 25529.0 40.1887656529517 0.0 - - - - - - - 269.1111111111111 51 9 FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 1669 211 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9388.[MT7]-TFGTAIVINPEK[MT7].2b6_1.heavy 789.461 / 735.416 10000.0 31.235200881958008 50 20 10 10 10 11.337541153219256 8.820254643274687 0.0 3 0.9956147867714648 18.62979937903555 10000.0 20.194752623688153 0.0 - - - - - - - 333.0 20 4 CUL4A cullin 4A 1671 211 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9388.[MT7]-TFGTAIVINPEK[MT7].2y3_1.heavy 789.461 / 517.31 19667.0 31.235200881958008 50 20 10 10 10 11.337541153219256 8.820254643274687 0.0 3 0.9956147867714648 18.62979937903555 19667.0 47.18694169415292 0.0 - - - - - - - 333.0 39 5 CUL4A cullin 4A 1673 211 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9388.[MT7]-TFGTAIVINPEK[MT7].2b7_1.heavy 789.461 / 834.484 7333.0 31.235200881958008 50 20 10 10 10 11.337541153219256 8.820254643274687 0.0 3 0.9956147867714648 18.62979937903555 7333.0 6.555072664666754 1.0 - - - - - - - 333.0 15 2 CUL4A cullin 4A 1675 211 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9388.[MT7]-TFGTAIVINPEK[MT7].2b5_1.heavy 789.461 / 622.332 11667.0 31.235200881958008 50 20 10 10 10 11.337541153219256 8.820254643274687 0.0 3 0.9956147867714648 18.62979937903555 11667.0 70.00200000000001 0.0 - - - - - - - 333.0 23 4 CUL4A cullin 4A 1677 212 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9241.[MT7]-SLPAVQSDER.2y8_1.heavy 623.331 / 901.437 84493.0 21.856000423431396 40 18 10 6 6 10.089662122540117 9.91113466293404 0.03759956359863281 5 0.9857663018604357 10.332062148590952 84493.0 26.36143140982402 0.0 - - - - - - - 691.3333333333334 168 3 PRIM2 primase, DNA, polypeptide 2 (58kDa) 1679 212 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9241.[MT7]-SLPAVQSDER.2b4_1.heavy 623.331 / 513.315 8035.0 21.856000423431396 40 18 10 6 6 10.089662122540117 9.91113466293404 0.03759956359863281 5 0.9857663018604357 10.332062148590952 8035.0 4.339891975308642 3.0 - - - - - - - 259.0 26 2 PRIM2 primase, DNA, polypeptide 2 (58kDa) 1681 212 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9241.[MT7]-SLPAVQSDER.2y9_1.heavy 623.331 / 1014.52 11145.0 21.856000423431396 40 18 10 6 6 10.089662122540117 9.91113466293404 0.03759956359863281 5 0.9857663018604357 10.332062148590952 11145.0 7.523143683702989 1.0 - - - - - - - 592.2857142857143 30 7 PRIM2 primase, DNA, polypeptide 2 (58kDa) 1683 212 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9241.[MT7]-SLPAVQSDER.2y7_1.heavy 623.331 / 804.385 6739.0 21.856000423431396 40 18 10 6 6 10.089662122540117 9.91113466293404 0.03759956359863281 5 0.9857663018604357 10.332062148590952 6739.0 15.702521486678044 0.0 - - - - - - - 259.0 13 6 PRIM2 primase, DNA, polypeptide 2 (58kDa) 1685 213 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9387.[MT7]-RNTELETLLAK[MT7].3b6_1.heavy 525.982 / 887.47 21333.0 31.054800033569336 39 16 10 3 10 2.533583242647094 31.672787870114078 0.051799774169921875 3 0.9602379856097408 6.168485366315222 21333.0 51.57788473763118 0.0 - - - - - - - 333.0 42 4 MID1 midline 1 (Opitz/BBB syndrome) 1687 213 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9387.[MT7]-RNTELETLLAK[MT7].3b5_1.heavy 525.982 / 758.428 19000.0 31.054800033569336 39 16 10 3 10 2.533583242647094 31.672787870114078 0.051799774169921875 3 0.9602379856097408 6.168485366315222 19000.0 55.262368815592204 0.0 - - - - - - - 333.0 38 2 MID1 midline 1 (Opitz/BBB syndrome) 1689 213 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9387.[MT7]-RNTELETLLAK[MT7].3y5_1.heavy 525.982 / 689.468 22000.0 31.054800033569336 39 16 10 3 10 2.533583242647094 31.672787870114078 0.051799774169921875 3 0.9602379856097408 6.168485366315222 22000.0 36.8538784696174 0.0 - - - - - - - 333.0 44 1 MID1 midline 1 (Opitz/BBB syndrome) 1691 213 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9387.[MT7]-RNTELETLLAK[MT7].3b7_1.heavy 525.982 / 988.518 12000.0 31.054800033569336 39 16 10 3 10 2.533583242647094 31.672787870114078 0.051799774169921875 3 0.9602379856097408 6.168485366315222 12000.0 45.0382865986767 0.0 - - - - - - - 667.0 24 2 MID1 midline 1 (Opitz/BBB syndrome) 1693 214 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9240.[MT7]-LVVVGAGGVGK[MT7].2y8_1.heavy 622.402 / 788.475 94667.0 27.845600128173828 50 20 10 10 10 40.007917250541276 2.499505269763751 0.0 3 0.9945791880852216 16.75459056351523 94667.0 113.09221758135241 0.0 - - - - - - - 333.0 189 3 HRAS;KRAS;NRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog;v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog;neuroblastoma RAS viral (v-ras) oncogene homolog 1695 214 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9240.[MT7]-LVVVGAGGVGK[MT7].2y5_1.heavy 622.402 / 561.348 72333.0 27.845600128173828 50 20 10 10 10 40.007917250541276 2.499505269763751 0.0 3 0.9945791880852216 16.75459056351523 72333.0 87.52293 0.0 - - - - - - - 1111.0 144 9 HRAS;KRAS;NRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog;v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog;neuroblastoma RAS viral (v-ras) oncogene homolog 1697 214 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9240.[MT7]-LVVVGAGGVGK[MT7].2y6_1.heavy 622.402 / 632.385 32000.0 27.845600128173828 50 20 10 10 10 40.007917250541276 2.499505269763751 0.0 3 0.9945791880852216 16.75459056351523 32000.0 118.85320879769492 0.0 - - - - - - - 333.0 64 3 HRAS;KRAS;NRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog;v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog;neuroblastoma RAS viral (v-ras) oncogene homolog 1699 214 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9240.[MT7]-LVVVGAGGVGK[MT7].2y7_1.heavy 622.402 / 689.406 136000.0 27.845600128173828 50 20 10 10 10 40.007917250541276 2.499505269763751 0.0 3 0.9945791880852216 16.75459056351523 136000.0 127.83999999999999 0.0 - - - - - - - 333.0 272 3 HRAS;KRAS;NRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog;v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog;neuroblastoma RAS viral (v-ras) oncogene homolog 1701 215 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9386.[MT7]-QASLWVQGDIFR.2y8_1.heavy 782.424 / 1020.53 13247.0 37.85490036010742 46 18 10 10 8 3.4597968505793157 23.142891243976173 0.0 4 0.9853867550654913 10.196678924544536 13247.0 30.615825047115408 0.0 - - - - - - - 751.1428571428571 26 7 CDC14A CDC14 cell division cycle 14 homolog A (S. cerevisiae) 1703 215 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9386.[MT7]-QASLWVQGDIFR.2b4_1.heavy 782.424 / 544.321 11689.0 37.85490036010742 46 18 10 10 8 3.4597968505793157 23.142891243976173 0.0 4 0.9853867550654913 10.196678924544536 11689.0 19.50337497506014 1.0 - - - - - - - 834.7142857142857 28 7 CDC14A CDC14 cell division cycle 14 homolog A (S. cerevisiae) 1705 215 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9386.[MT7]-QASLWVQGDIFR.2y10_1.heavy 782.424 / 1220.64 5455.0 37.85490036010742 46 18 10 10 8 3.4597968505793157 23.142891243976173 0.0 4 0.9853867550654913 10.196678924544536 5455.0 29.936585057652817 0.0 - - - - - - - 243.75 10 8 CDC14A CDC14 cell division cycle 14 homolog A (S. cerevisiae) 1707 215 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9386.[MT7]-QASLWVQGDIFR.2y7_1.heavy 782.424 / 834.447 9741.0 37.85490036010742 46 18 10 10 8 3.4597968505793157 23.142891243976173 0.0 4 0.9853867550654913 10.196678924544536 9741.0 38.24035353003161 0.0 - - - - - - - 667.5714285714286 19 7 CDC14A CDC14 cell division cycle 14 homolog A (S. cerevisiae) 1709 216 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9385.[MT7]-LVTGTVLAVFGSVR.2y8_1.heavy 781.973 / 848.499 40133.0 44.02320098876953 44 14 10 10 10 2.6934383742431645 37.1272648954143 0.0 3 0.9434024367402323 5.162898380808507 40133.0 103.32937309251012 0.0 - - - - - - - 275.2 80 10 POLD2 polymerase (DNA directed), delta 2, regulatory subunit 50kDa 1711 216 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9385.[MT7]-LVTGTVLAVFGSVR.2y12_1.heavy 781.973 / 1206.68 58634.0 44.02320098876953 44 14 10 10 10 2.6934383742431645 37.1272648954143 0.0 3 0.9434024367402323 5.162898380808507 58634.0 134.1638384941325 0.0 - - - - - - - 201.75 117 8 POLD2 polymerase (DNA directed), delta 2, regulatory subunit 50kDa 1713 216 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9385.[MT7]-LVTGTVLAVFGSVR.2y11_1.heavy 781.973 / 1105.64 44497.0 44.02320098876953 44 14 10 10 10 2.6934383742431645 37.1272648954143 0.0 3 0.9434024367402323 5.162898380808507 44497.0 243.45653613730545 0.0 - - - - - - - 232.11111111111111 88 9 POLD2 polymerase (DNA directed), delta 2, regulatory subunit 50kDa 1715 216 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9385.[MT7]-LVTGTVLAVFGSVR.2y7_1.heavy 781.973 / 735.415 32353.0 44.02320098876953 44 14 10 10 10 2.6934383742431645 37.1272648954143 0.0 3 0.9434024367402323 5.162898380808507 32353.0 97.08592157270647 0.0 - - - - - - - 256.4 64 10 POLD2 polymerase (DNA directed), delta 2, regulatory subunit 50kDa 1717 217 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A98.[MT7]-QYEAER.2b3_1.heavy 470.236 / 565.274 8395.0 15.489700317382812 37 15 4 10 8 7.13992016947418 14.005758835727221 0.0 4 0.9583423744934514 6.0255379501686965 8395.0 30.071641791044776 0.0 - - - - - - - 214.6 16 5 STAG1;STAG3;STAG2;STAG3L4 stromal antigen 1;stromal antigen 3;stromal antigen 2;stromal antigen 3-like 4 1719 217 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A98.[MT7]-QYEAER.2y4_1.heavy 470.236 / 504.241 5715.0 15.489700317382812 37 15 4 10 8 7.13992016947418 14.005758835727221 0.0 4 0.9583423744934514 6.0255379501686965 5715.0 25.453361344537814 0.0 - - - - - - - 223.5 11 8 STAG1;STAG3;STAG2;STAG3L4 stromal antigen 1;stromal antigen 3;stromal antigen 2;stromal antigen 3-like 4 1721 217 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A98.[MT7]-QYEAER.2y5_1.heavy 470.236 / 667.305 25184.0 15.489700317382812 37 15 4 10 8 7.13992016947418 14.005758835727221 0.0 4 0.9583423744934514 6.0255379501686965 25184.0 70.3907487771228 1.0 - - - - - - - 255.28571428571428 88 7 STAG1;STAG3;STAG2;STAG3L4 stromal antigen 1;stromal antigen 3;stromal antigen 2;stromal antigen 3-like 4 1723 217 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A98.[MT7]-QYEAER.2b4_1.heavy 470.236 / 636.311 6430.0 15.489700317382812 37 15 4 10 8 7.13992016947418 14.005758835727221 0.0 4 0.9583423744934514 6.0255379501686965 6430.0 26.707659183076217 0.0 - - - - - - - 204.42857142857142 12 7 STAG1;STAG3;STAG2;STAG3L4 stromal antigen 1;stromal antigen 3;stromal antigen 2;stromal antigen 3-like 4 1725 218 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A412.[MT7]-TERPRPNTFIIR.4y4_1.heavy 411.742 / 548.356 16675.0 24.082499980926514 34 11 10 5 8 1.6008195102598566 39.601237665929695 0.04559898376464844 4 0.8729907341687966 3.425603598981509 16675.0 18.56242171189979 0.0 - - - - - - - 287.0 33 3 AKT1 v-akt murine thymoma viral oncogene homolog 1 1727 218 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A412.[MT7]-TERPRPNTFIIR.4y9_2.heavy 411.742 / 557.33 18687.0 24.082499980926514 34 11 10 5 8 1.6008195102598566 39.601237665929695 0.04559898376464844 4 0.8729907341687966 3.425603598981509 18687.0 35.7968553202524 0.0 - - - - - - - 287.0 37 2 AKT1 v-akt murine thymoma viral oncogene homolog 1 1729 218 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A412.[MT7]-TERPRPNTFIIR.4y7_1.heavy 411.742 / 860.499 2012.0 24.082499980926514 34 11 10 5 8 1.6008195102598566 39.601237665929695 0.04559898376464844 4 0.8729907341687966 3.425603598981509 2012.0 0.0 0.0 - - - - - - - 287.0 4 1 AKT1 v-akt murine thymoma viral oncogene homolog 1 1731 218 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A412.[MT7]-TERPRPNTFIIR.4b3_1.heavy 411.742 / 531.301 7187.0 24.082499980926514 34 11 10 5 8 1.6008195102598566 39.601237665929695 0.04559898376464844 4 0.8729907341687966 3.425603598981509 7187.0 6.966015909064466 3.0 - - - - - - - 287.0 27 1 AKT1 v-akt murine thymoma viral oncogene homolog 1 1733 219 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A413.[MT7]-YLIPNATQPESK[MT7].3y3_1.heavy 550.31 / 507.289 14000.0 27.692749977111816 45 20 10 5 10 8.243802253876703 12.130324930219466 0.046199798583984375 3 0.9933753575617725 15.154482238158815 14000.0 9.01060936548224 0.0 - - - - - - - 333.0 28 2 YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide 1735 219 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A413.[MT7]-YLIPNATQPESK[MT7].3b5_1.heavy 550.31 / 745.437 10333.0 27.692749977111816 45 20 10 5 10 8.243802253876703 12.130324930219466 0.046199798583984375 3 0.9933753575617725 15.154482238158815 10333.0 5.384966563451161 1.0 - - - - - - - 333.0 21 4 YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide 1737 219 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A413.[MT7]-YLIPNATQPESK[MT7].3y4_1.heavy 550.31 / 604.342 77000.0 27.692749977111816 45 20 10 5 10 8.243802253876703 12.130324930219466 0.046199798583984375 3 0.9933753575617725 15.154482238158815 77000.0 62.27846474778383 0.0 - - - - - - - 333.0 154 2 YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide 1739 219 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A413.[MT7]-YLIPNATQPESK[MT7].3b3_1.heavy 550.31 / 534.341 73333.0 27.692749977111816 45 20 10 5 10 8.243802253876703 12.130324930219466 0.046199798583984375 3 0.9933753575617725 15.154482238158815 73333.0 81.38335332933414 0.0 - - - - - - - 333.0 146 3 YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide 1741 220 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9656.[MT7]-TIETLLGSTTK[MT7].2y8_1.heavy 726.432 / 964.58 10563.0 33.35969924926758 50 20 10 10 10 6.196108931459175 16.13916106159388 0.0 3 0.9932160319853631 14.975269540845035 10563.0 14.21596252129472 0.0 - - - - - - - 293.0 21 3 POLE2 polymerase (DNA directed), epsilon 2 (p59 subunit) 1743 220 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9656.[MT7]-TIETLLGSTTK[MT7].2y5_1.heavy 726.432 / 637.364 32276.0 33.35969924926758 50 20 10 10 10 6.196108931459175 16.13916106159388 0.0 3 0.9932160319853631 14.975269540845035 32276.0 61.58657604145256 0.0 - - - - - - - 293.0 64 4 POLE2 polymerase (DNA directed), epsilon 2 (p59 subunit) 1745 220 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9656.[MT7]-TIETLLGSTTK[MT7].2b4_1.heavy 726.432 / 589.331 11737.0 33.35969924926758 50 20 10 10 10 6.196108931459175 16.13916106159388 0.0 3 0.9932160319853631 14.975269540845035 11737.0 14.552313120333887 0.0 - - - - - - - 293.0 23 3 POLE2 polymerase (DNA directed), epsilon 2 (p59 subunit) 1747 220 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9656.[MT7]-TIETLLGSTTK[MT7].2y6_1.heavy 726.432 / 750.448 19072.0 33.35969924926758 50 20 10 10 10 6.196108931459175 16.13916106159388 0.0 3 0.9932160319853631 14.975269540845035 19072.0 78.65255274985319 0.0 - - - - - - - 293.0 38 4 POLE2 polymerase (DNA directed), epsilon 2 (p59 subunit) 1749 221 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A414.[MT7]-EVVSIQTSLEQK[MT7].3y3_1.heavy 550.317 / 548.316 42667.0 29.065900802612305 45 15 10 10 10 3.1661321756711542 31.584278372333614 0.0 3 0.9534670612229453 5.698801000509829 42667.0 131.17814701615993 0.0 - - - - - - - 333.0 85 4 SMC1B structural maintenance of chromosomes 1B 1751 221 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A414.[MT7]-EVVSIQTSLEQK[MT7].3b4_1.heavy 550.317 / 559.321 48333.0 29.065900802612305 45 15 10 10 10 3.1661321756711542 31.584278372333614 0.0 3 0.9534670612229453 5.698801000509829 48333.0 164.55967665926275 0.0 - - - - - - - 333.0 96 2 SMC1B structural maintenance of chromosomes 1B 1753 221 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A414.[MT7]-EVVSIQTSLEQK[MT7].3y4_1.heavy 550.317 / 661.4 16000.0 29.065900802612305 45 15 10 10 10 3.1661321756711542 31.584278372333614 0.0 3 0.9534670612229453 5.698801000509829 16000.0 11.497456182227376 1.0 - - - - - - - 333.0 44 5 SMC1B structural maintenance of chromosomes 1B 1755 221 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A414.[MT7]-EVVSIQTSLEQK[MT7].3y5_1.heavy 550.317 / 748.432 18667.0 29.065900802612305 45 15 10 10 10 3.1661321756711542 31.584278372333614 0.0 3 0.9534670612229453 5.698801000509829 18667.0 39.89095475143149 0.0 - - - - - - - 333.0 37 5 SMC1B structural maintenance of chromosomes 1B 1757 222 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A415.[MT7]-FLANEILQEDYR.3y6_1.heavy 552.29 / 823.394 7328.0 36.7599983215332 47 17 10 10 10 1.965761353159609 39.63894807829197 0.0 3 0.9724597023056745 7.419527808646229 7328.0 10.022464019560827 1.0 - - - - - - - 302.0 16 5 WEE2 WEE1 homolog 2 (S. pombe) 1759 222 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A415.[MT7]-FLANEILQEDYR.3b5_1.heavy 552.29 / 719.385 16166.0 36.7599983215332 47 17 10 10 10 1.965761353159609 39.63894807829197 0.0 3 0.9724597023056745 7.419527808646229 16166.0 27.60180149714389 0.0 - - - - - - - 269.75 32 4 WEE2 WEE1 homolog 2 (S. pombe) 1761 222 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A415.[MT7]-FLANEILQEDYR.3y4_1.heavy 552.29 / 582.252 4095.0 36.7599983215332 47 17 10 10 10 1.965761353159609 39.63894807829197 0.0 3 0.9724597023056745 7.419527808646229 4095.0 8.921113689095128 1.0 - - - - - - - 296.625 8 8 WEE2 WEE1 homolog 2 (S. pombe) 1763 222 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A415.[MT7]-FLANEILQEDYR.3y5_1.heavy 552.29 / 710.31 9699.0 36.7599983215332 47 17 10 10 10 1.965761353159609 39.63894807829197 0.0 3 0.9724597023056745 7.419527808646229 9699.0 50.29877540713255 0.0 - - - - - - - 323.5 19 4 WEE2 WEE1 homolog 2 (S. pombe) 1765 223 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A411.[MT7]-ISLDQIDLLSTK[MT7].2y4_1.heavy 817.484 / 592.379 9231.0 37.557098388671875 50 20 10 10 10 18.51362845245824 5.401426319902299 0.0 3 0.9987913416353171 35.49497186476924 9231.0 28.894264703596026 0.0 - - - - - - - 283.55555555555554 18 9 PRIM2 primase, DNA, polypeptide 2 (58kDa) 1767 223 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A411.[MT7]-ISLDQIDLLSTK[MT7].2b4_1.heavy 817.484 / 573.336 22194.0 37.557098388671875 50 20 10 10 10 18.51362845245824 5.401426319902299 0.0 3 0.9987913416353171 35.49497186476924 22194.0 24.013340339100747 0.0 - - - - - - - 785.6666666666666 44 9 PRIM2 primase, DNA, polypeptide 2 (58kDa) 1769 223 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A411.[MT7]-ISLDQIDLLSTK[MT7].2b7_1.heavy 817.484 / 929.506 11392.0 37.557098388671875 50 20 10 10 10 18.51362845245824 5.401426319902299 0.0 3 0.9987913416353171 35.49497186476924 11392.0 27.01796342617193 0.0 - - - - - - - 673.4285714285714 22 7 PRIM2 primase, DNA, polypeptide 2 (58kDa) 1771 223 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A411.[MT7]-ISLDQIDLLSTK[MT7].2b5_1.heavy 817.484 / 701.395 11588.0 37.557098388671875 50 20 10 10 10 18.51362845245824 5.401426319902299 0.0 3 0.9987913416353171 35.49497186476924 11588.0 30.372462135752496 0.0 - - - - - - - 763.7777777777778 23 9 PRIM2 primase, DNA, polypeptide 2 (58kDa) 1773 224 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A416.[MT7]-DVIDEPIIEEPSR.2y8_1.heavy 828.434 / 940.51 5333.0 30.51609992980957 43 13 10 10 10 1.8463597165132764 38.980976827663845 0.0 3 0.9068214823180951 4.01118871682907 5333.0 30.748828828828835 0.0 - - - - - - - 333.0 10 1 RAD21 RAD21 homolog (S. pombe) 1775 224 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A416.[MT7]-DVIDEPIIEEPSR.2y9_1.heavy 828.434 / 1069.55 10000.0 30.51609992980957 43 13 10 10 10 1.8463597165132764 38.980976827663845 0.0 3 0.9068214823180951 4.01118871682907 10000.0 37.62762762762763 0.0 - - - - - - - 333.0 20 3 RAD21 RAD21 homolog (S. pombe) 1777 224 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A416.[MT7]-DVIDEPIIEEPSR.2b4_1.heavy 828.434 / 587.316 13667.0 30.51609992980957 43 13 10 10 10 1.8463597165132764 38.980976827663845 0.0 3 0.9068214823180951 4.01118871682907 13667.0 50.269266032724396 0.0 - - - - - - - 333.0 27 3 RAD21 RAD21 homolog (S. pombe) 1779 224 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A416.[MT7]-DVIDEPIIEEPSR.2y10_1.heavy 828.434 / 1184.58 7000.0 30.51609992980957 43 13 10 10 10 1.8463597165132764 38.980976827663845 0.0 3 0.9068214823180951 4.01118871682907 7000.0 30.885143014078544 0.0 - - - - - - - 333.0 14 2 RAD21 RAD21 homolog (S. pombe) 1781 225 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A418.[MT7]-HLQINQTFEELR.3y6_1.heavy 557.969 / 794.404 46667.0 30.567399978637695 48 18 10 10 10 3.7694947658114253 26.528754173365698 0.0 3 0.9872833891466773 10.932396458275374 46667.0 41.31069966006799 0.0 - - - - - - - 333.0 93 2 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 1783 225 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A418.[MT7]-HLQINQTFEELR.3y4_1.heavy 557.969 / 546.288 71000.0 30.567399978637695 48 18 10 10 10 3.7694947658114253 26.528754173365698 0.0 3 0.9872833891466773 10.932396458275374 71000.0 54.59912247806195 0.0 - - - - - - - 333.0 142 2 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 1785 225 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A418.[MT7]-HLQINQTFEELR.3b3_1.heavy 557.969 / 523.311 113333.0 30.567399978637695 48 18 10 10 10 3.7694947658114253 26.528754173365698 0.0 3 0.9872833891466773 10.932396458275374 113333.0 61.5792226312589 0.0 - - - - - - - 333.0 226 2 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 1787 225 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A418.[MT7]-HLQINQTFEELR.3y5_1.heavy 557.969 / 693.357 73333.0 30.567399978637695 48 18 10 10 10 3.7694947658114253 26.528754173365698 0.0 3 0.9872833891466773 10.932396458275374 73333.0 141.62068717291027 0.0 - - - - - - - 333.0 146 2 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 1789 226 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A419.[MT7]-LQESPC[CAM]IFALTPR.3b6_1.heavy 559.303 / 859.41 3427.0 36.04359817504883 42 14 10 10 8 2.0573027717551313 40.95750925887518 0.0 4 0.9446874644062796 5.223097628603741 3427.0 29.009254385964915 1.0 - - - - - - - 319.6 7 10 PIAS4 protein inhibitor of activated STAT, 4 1791 226 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A419.[MT7]-LQESPC[CAM]IFALTPR.3y6_1.heavy 559.303 / 704.409 9139.0 36.04359817504883 42 14 10 10 8 2.0573027717551313 40.95750925887518 0.0 4 0.9446874644062796 5.223097628603741 9139.0 56.04149945295405 0.0 - - - - - - - 365.4 18 5 PIAS4 protein inhibitor of activated STAT, 4 1793 226 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A419.[MT7]-LQESPC[CAM]IFALTPR.3b4_1.heavy 559.303 / 602.327 5255.0 36.04359817504883 42 14 10 10 8 2.0573027717551313 40.95750925887518 0.0 4 0.9446874644062796 5.223097628603741 5255.0 4.654021780011156 0.0 - - - - - - - 256.625 10 8 PIAS4 protein inhibitor of activated STAT, 4 1795 226 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A419.[MT7]-LQESPC[CAM]IFALTPR.3b3_1.heavy 559.303 / 515.295 2970.0 36.04359817504883 42 14 10 10 8 2.0573027717551313 40.95750925887518 0.0 4 0.9446874644062796 5.223097628603741 2970.0 -0.33010315723663636 7.0 - - - - - - - 352.90909090909093 8 11 PIAS4 protein inhibitor of activated STAT, 4 1797 227 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A429.[MT7]-SSQPQAGSQGPQTFR.3y6_1.heavy 573.956 / 705.368 10931.0 20.03380012512207 37 14 10 5 8 3.743017512609456 26.716412536976 0.04180145263671875 4 0.9383532445620366 4.944820541434142 10931.0 16.08204920696931 0.0 - - - - - - - 364.5 21 6 PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2 1799 227 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A429.[MT7]-SSQPQAGSQGPQTFR.3b5_1.heavy 573.956 / 672.343 3887.0 20.03380012512207 37 14 10 5 8 3.743017512609456 26.716412536976 0.04180145263671875 4 0.9383532445620366 4.944820541434142 3887.0 3.3676276589578626 1.0 - - - - - - - 405.0 9 6 PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2 1801 227 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A429.[MT7]-SSQPQAGSQGPQTFR.3b12_2.heavy 573.956 / 649.316 1457.0 20.03380012512207 37 14 10 5 8 3.743017512609456 26.716412536976 0.04180145263671875 4 0.9383532445620366 4.944820541434142 1457.0 1.4274908416041314 11.0 - - - - - - - 378.0 10 9 PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2 1803 227 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A429.[MT7]-SSQPQAGSQGPQTFR.3y9_1.heavy 573.956 / 977.48 3887.0 20.03380012512207 37 14 10 5 8 3.743017512609456 26.716412536976 0.04180145263671875 4 0.9383532445620366 4.944820541434142 3887.0 7.4652340558511145 0.0 - - - - - - - 388.8 7 5 PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2 1805 228 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A428.[MT7]-IVEQPTVSVTEPK[MT7].3y6_1.heavy 572.333 / 804.458 12796.0 25.9591007232666 47 17 10 10 10 4.8669610204219484 20.54670246595284 0.0 3 0.9767871270214258 8.084519671968573 12796.0 21.29334375 0.0 - - - - - - - 777.1428571428571 25 7 POLD3 polymerase (DNA-directed), delta 3, accessory subunit 1807 228 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A428.[MT7]-IVEQPTVSVTEPK[MT7].3b6_1.heavy 572.333 / 812.463 7038.0 25.9591007232666 47 17 10 10 10 4.8669610204219484 20.54670246595284 0.0 3 0.9767871270214258 8.084519671968573 7038.0 14.075999999999999 1.0 - - - - - - - 777.1428571428571 23 7 POLD3 polymerase (DNA-directed), delta 3, accessory subunit 1809 228 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A428.[MT7]-IVEQPTVSVTEPK[MT7].3b4_1.heavy 572.333 / 614.363 68140.0 25.9591007232666 47 17 10 10 10 4.8669610204219484 20.54670246595284 0.0 3 0.9767871270214258 8.084519671968573 68140.0 92.84074999999999 0.0 - - - - - - - 320.0 136 5 POLD3 polymerase (DNA-directed), delta 3, accessory subunit 1811 228 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A428.[MT7]-IVEQPTVSVTEPK[MT7].3y4_1.heavy 572.333 / 618.358 43188.0 25.9591007232666 47 17 10 10 10 4.8669610204219484 20.54670246595284 0.0 3 0.9767871270214258 8.084519671968573 43188.0 156.5565 0.0 - - - - - - - 320.0 86 6 POLD3 polymerase (DNA-directed), delta 3, accessory subunit 1813 229 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A427.[MT7]-VTLVFEHVDQDLR.3y6_1.heavy 572.313 / 745.384 97711.0 34.72949981689453 50 20 10 10 10 5.070259362531072 15.75061673814398 0.0 3 0.992755172537965 14.490580978686546 97711.0 145.47915579432077 0.0 - - - - - - - 261.0 195 4 CDK4 cyclin-dependent kinase 4 1815 229 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A427.[MT7]-VTLVFEHVDQDLR.3b4_1.heavy 572.313 / 557.378 141746.0 34.72949981689453 50 20 10 10 10 5.070259362531072 15.75061673814398 0.0 3 0.992755172537965 14.490580978686546 141746.0 105.95108795049293 0.0 - - - - - - - 261.0 283 3 CDK4 cyclin-dependent kinase 4 1817 229 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A427.[MT7]-VTLVFEHVDQDLR.3y4_1.heavy 572.313 / 531.289 59148.0 34.72949981689453 50 20 10 10 10 5.070259362531072 15.75061673814398 0.0 3 0.992755172537965 14.490580978686546 59148.0 84.89441913324578 0.0 - - - - - - - 261.0 118 3 CDK4 cyclin-dependent kinase 4 1819 229 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A427.[MT7]-VTLVFEHVDQDLR.3y5_1.heavy 572.313 / 646.315 128979.0 34.72949981689453 50 20 10 10 10 5.070259362531072 15.75061673814398 0.0 3 0.992755172537965 14.490580978686546 128979.0 167.0820607176758 0.0 - - - - - - - 1228.4285714285713 257 7 CDK4 cyclin-dependent kinase 4 1821 230 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A323.[MT7]-ARQQLQEELR.3y6_1.heavy 472.268 / 787.431 2839.0 21.71489906311035 42 14 10 10 8 1.4722266057299642 45.28288403918076 0.0 4 0.9302945207742651 4.647006854563468 2839.0 1.1003875968992247 0.0 - - - - - - - 258.0 5 8 MAD1L1 MAD1 mitotic arrest deficient-like 1 (yeast) 1823 230 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A323.[MT7]-ARQQLQEELR.3b3_1.heavy 472.268 / 500.306 7483.0 21.71489906311035 42 14 10 10 8 1.4722266057299642 45.28288403918076 0.0 4 0.9302945207742651 4.647006854563468 7483.0 6.960930232558139 0.0 - - - - - - - 612.75 14 8 MAD1L1 MAD1 mitotic arrest deficient-like 1 (yeast) 1825 230 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A323.[MT7]-ARQQLQEELR.3y5_1.heavy 472.268 / 674.347 7225.0 21.71489906311035 42 14 10 10 8 1.4722266057299642 45.28288403918076 0.0 4 0.9302945207742651 4.647006854563468 7225.0 25.623546511627907 1.0 - - - - - - - 258.0 14 4 MAD1L1 MAD1 mitotic arrest deficient-like 1 (yeast) 1827 230 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A323.[MT7]-ARQQLQEELR.3b8_2.heavy 472.268 / 564.3 11096.0 21.71489906311035 42 14 10 10 8 1.4722266057299642 45.28288403918076 0.0 4 0.9302945207742651 4.647006854563468 11096.0 21.073798449612404 0.0 - - - - - - - 580.5 22 8 MAD1L1 MAD1 mitotic arrest deficient-like 1 (yeast) 1829 231 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A322.[MT7]-DSSTC[CAM]PGDYVLSVSENSR.3y7_1.heavy 706.324 / 778.369 20667.0 30.013200759887695 44 16 10 10 8 6.170510810936603 16.20611373417581 0.0 4 0.9635693536005404 6.446167209728361 20667.0 25.62708 0.0 - - - - - - - 333.0 41 4 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 1831 231 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A322.[MT7]-DSSTC[CAM]PGDYVLSVSENSR.3y8_1.heavy 706.324 / 891.453 12333.0 30.013200759887695 44 16 10 10 8 6.170510810936603 16.20611373417581 0.0 4 0.9635693536005404 6.446167209728361 12333.0 10.654849748438654 0.0 - - - - - - - 333.0 24 2 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 1833 231 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A322.[MT7]-DSSTC[CAM]PGDYVLSVSENSR.3b8_1.heavy 706.324 / 964.38 11333.0 30.013200759887695 44 16 10 10 8 6.170510810936603 16.20611373417581 0.0 4 0.9635693536005404 6.446167209728361 11333.0 36.06929860874672 0.0 - - - - - - - 333.0 22 4 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 1835 231 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A322.[MT7]-DSSTC[CAM]PGDYVLSVSENSR.3y5_1.heavy 706.324 / 592.268 12333.0 30.013200759887695 44 16 10 10 8 6.170510810936603 16.20611373417581 0.0 4 0.9635693536005404 6.446167209728361 12333.0 16.07858805399325 1.0 - - - - - - - 333.0 26 1 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 1837 232 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A321.[MT7]-ATAFNEQVDK[MT7].3b6_1.heavy 470.92 / 778.385 5924.0 22.773399353027344 45 17 10 10 8 7.869059163180356 12.707999511288975 0.0 4 0.9798800887386108 8.685972988877376 5924.0 11.654861249640398 1.0 - - - - - - - 269.0 13 6 RPA1 replication protein A1, 70kDa 1839 232 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A321.[MT7]-ATAFNEQVDK[MT7].3b4_1.heavy 470.92 / 535.3 15617.0 22.773399353027344 45 17 10 10 8 7.869059163180356 12.707999511288975 0.0 4 0.9798800887386108 8.685972988877376 15617.0 12.567467986117258 0.0 - - - - - - - 639.875 31 8 RPA1 replication protein A1, 70kDa 1841 232 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A321.[MT7]-ATAFNEQVDK[MT7].3b5_1.heavy 470.92 / 649.343 17502.0 22.773399353027344 45 17 10 10 8 7.869059163180356 12.707999511288975 0.0 4 0.9798800887386108 8.685972988877376 17502.0 67.00119828934153 1.0 - - - - - - - 269.0 35 4 RPA1 replication protein A1, 70kDa 1843 232 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A321.[MT7]-ATAFNEQVDK[MT7].3y4_1.heavy 470.92 / 633.369 7270.0 22.773399353027344 45 17 10 10 8 7.869059163180356 12.707999511288975 0.0 4 0.9798800887386108 8.685972988877376 7270.0 10.39535747446611 3.0 - - - - - - - 1153.857142857143 29 7 RPA1 replication protein A1, 70kDa 1845 233 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A421.[MT7]-IANTYNLIEVDK[MT7].3b6_1.heavy 560.985 / 821.427 17323.0 32.26369857788086 41 13 10 10 8 1.325635797427178 47.15910203921847 0.0 4 0.9297169446422683 4.627644616715956 17323.0 71.10679047619048 1.0 - - - - - - - 315.0 42 1 KLHL9 kelch-like 9 (Drosophila) 1847 233 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A421.[MT7]-IANTYNLIEVDK[MT7].3b4_1.heavy 560.985 / 544.321 17638.0 32.26369857788086 41 13 10 10 8 1.325635797427178 47.15910203921847 0.0 4 0.9297169446422683 4.627644616715956 17638.0 29.509071764981588 0.0 - - - - - - - 765.0 35 7 KLHL9 kelch-like 9 (Drosophila) 1849 233 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A421.[MT7]-IANTYNLIEVDK[MT7].3y4_1.heavy 560.985 / 634.353 40002.0 32.26369857788086 41 13 10 10 8 1.325635797427178 47.15910203921847 0.0 4 0.9297169446422683 4.627644616715956 40002.0 80.00399999999999 0.0 - - - - - - - 315.0 80 5 KLHL9 kelch-like 9 (Drosophila) 1851 233 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A421.[MT7]-IANTYNLIEVDK[MT7].3b7_1.heavy 560.985 / 934.511 10079.0 32.26369857788086 41 13 10 10 8 1.325635797427178 47.15910203921847 0.0 4 0.9297169446422683 4.627644616715956 10079.0 61.75387301587301 0.0 - - - - - - - 315.0 20 2 KLHL9 kelch-like 9 (Drosophila) 1853 234 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A426.[MT7]-VTSGGVSESPSGFSK[MT7].3b6_1.heavy 571.968 / 645.369 36393.0 23.45210075378418 47 17 10 10 10 2.6628486646752045 31.53743283561201 0.0 3 0.9750227972050864 7.79259932581439 36393.0 63.96148533898285 0.0 - - - - - - - 278.0 72 5 CHEK1 CHK1 checkpoint homolog (S. pombe) 1855 234 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A426.[MT7]-VTSGGVSESPSGFSK[MT7].3b5_1.heavy 571.968 / 546.3 46117.0 23.45210075378418 47 17 10 10 10 2.6628486646752045 31.53743283561201 0.0 3 0.9750227972050864 7.79259932581439 46117.0 36.380099430797785 0.0 - - - - - - - 278.0 92 1 CHEK1 CHK1 checkpoint homolog (S. pombe) 1857 234 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A426.[MT7]-VTSGGVSESPSGFSK[MT7].3y4_1.heavy 571.968 / 582.337 27225.0 23.45210075378418 47 17 10 10 10 2.6628486646752045 31.53743283561201 0.0 3 0.9750227972050864 7.79259932581439 27225.0 79.68909182377986 0.0 - - - - - - - 694.5 54 8 CHEK1 CHK1 checkpoint homolog (S. pombe) 1859 234 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A426.[MT7]-VTSGGVSESPSGFSK[MT7].3y5_1.heavy 571.968 / 669.369 27503.0 23.45210075378418 47 17 10 10 10 2.6628486646752045 31.53743283561201 0.0 3 0.9750227972050864 7.79259932581439 27503.0 16.664824597746666 0.0 - - - - - - - 278.0 55 4 CHEK1 CHK1 checkpoint homolog (S. pombe) 1861 235 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A425.[MT7]-VPVATYTNSSQPFR.3y7_1.heavy 570.969 / 835.406 12000.0 28.180200576782227 48 18 10 10 10 2.6545157738655223 25.870948707063413 0.0 3 0.982363572922824 9.27933190216831 12000.0 28.49163418290854 0.0 - - - - - - - 333.0 24 3 POLD2 polymerase (DNA directed), delta 2, regulatory subunit 50kDa 1863 235 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A425.[MT7]-VPVATYTNSSQPFR.3y6_1.heavy 570.969 / 721.363 10667.0 28.180200576782227 48 18 10 10 10 2.6545157738655223 25.870948707063413 0.0 3 0.982363572922824 9.27933190216831 10667.0 9.257765800839831 0.0 - - - - - - - 333.0 21 5 POLD2 polymerase (DNA directed), delta 2, regulatory subunit 50kDa 1865 235 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A425.[MT7]-VPVATYTNSSQPFR.3b4_1.heavy 570.969 / 511.336 12000.0 28.180200576782227 48 18 10 10 10 2.6545157738655223 25.870948707063413 0.0 3 0.982363572922824 9.27933190216831 12000.0 5.540864066514933 0.0 - - - - - - - 333.0 24 2 POLD2 polymerase (DNA directed), delta 2, regulatory subunit 50kDa 1867 235 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A425.[MT7]-VPVATYTNSSQPFR.3y5_1.heavy 570.969 / 634.331 8000.0 28.180200576782227 48 18 10 10 10 2.6545157738655223 25.870948707063413 0.0 3 0.982363572922824 9.27933190216831 8000.0 10.602595018343463 2.0 - - - - - - - 333.0 16 1 POLD2 polymerase (DNA directed), delta 2, regulatory subunit 50kDa 1869 236 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A424.[MT7]-LQLVGTAAMLLASK[MT7].3b4_1.heavy 568.683 / 598.404 25379.0 42.51259994506836 43 13 10 10 10 1.6112771338360017 51.325818135259674 0.0 3 0.9210713477237481 4.363613184720228 25379.0 85.2145228248223 0.0 - - - - - - - 246.15384615384616 50 13 CCNA2;CCNA1 cyclin A2;cyclin A1 1871 236 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A424.[MT7]-LQLVGTAAMLLASK[MT7].3y4_1.heavy 568.683 / 562.368 68743.0 42.51259994506836 43 13 10 10 10 1.6112771338360017 51.325818135259674 0.0 3 0.9210713477237481 4.363613184720228 68743.0 314.0594410391907 0.0 - - - - - - - 220.83333333333334 137 6 CCNA2;CCNA1 cyclin A2;cyclin A1 1873 236 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A424.[MT7]-LQLVGTAAMLLASK[MT7].3b8_1.heavy 568.683 / 898.548 44027.0 42.51259994506836 43 13 10 10 10 1.6112771338360017 51.325818135259674 0.0 3 0.9210713477237481 4.363613184720228 44027.0 210.71197026136667 0.0 - - - - - - - 236.28571428571428 88 7 CCNA2;CCNA1 cyclin A2;cyclin A1 1875 236 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A424.[MT7]-LQLVGTAAMLLASK[MT7].3b7_1.heavy 568.683 / 827.511 19200.0 42.51259994506836 43 13 10 10 10 1.6112771338360017 51.325818135259674 0.0 3 0.9210713477237481 4.363613184720228 19200.0 36.528036465757864 0.0 - - - - - - - 312.5 38 12 CCNA2;CCNA1 cyclin A2;cyclin A1 1877 237 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A423.[MT7]-LLYAIEC[CAM]AAGFELS.3b6_1.heavy 567.628 / 847.505 723.0 49.47240161895752 46 20 10 6 10 5.447125886218351 18.358305295092908 0.031200408935546875 3 0.9915084430784594 13.383228960194613 723.0 21.69 1.0 - - - - - - - 0.0 1 0 UBE3C ubiquitin protein ligase E3C 1879 237 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A423.[MT7]-LLYAIEC[CAM]AAGFELS.3b4_1.heavy 567.628 / 605.378 2381.0 49.47240161895752 46 20 10 6 10 5.447125886218351 18.358305295092908 0.031200408935546875 3 0.9915084430784594 13.383228960194613 2381.0 16.28767200448895 0.0 - - - - - - - 160.22727272727272 4 22 UBE3C ubiquitin protein ligase E3C 1881 237 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A423.[MT7]-LLYAIEC[CAM]AAGFELS.3b5_1.heavy 567.628 / 718.462 1386.0 49.47240161895752 46 20 10 6 10 5.447125886218351 18.358305295092908 0.031200408935546875 3 0.9915084430784594 13.383228960194613 1386.0 8.280930633347694 1.0 - - - - - - - 111.75 2 24 UBE3C ubiquitin protein ligase E3C 1883 237 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A423.[MT7]-LLYAIEC[CAM]AAGFELS.3b3_1.heavy 567.628 / 534.341 1447.0 49.47240161895752 46 20 10 6 10 5.447125886218351 18.358305295092908 0.031200408935546875 3 0.9915084430784594 13.383228960194613 1447.0 12.380833416309866 0.0 - - - - - - - 138.36363636363637 2 22 UBE3C ubiquitin protein ligase E3C 1885 238 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A439.[MT7]-LFSLELVDESGEIR.2y4_1.heavy 875.971 / 474.267 16272.0 40.83594989776611 43 17 10 6 10 3.5740784083775354 22.35909578897345 0.036602020263671875 3 0.9740162326061002 7.63952601092541 16272.0 36.50742857142857 0.0 - - - - - - - 723.2222222222222 32 9 RPA1 replication protein A1, 70kDa 1887 238 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A439.[MT7]-LFSLELVDESGEIR.2y9_1.heavy 875.971 / 1017.52 17628.0 40.83594989776611 43 17 10 6 10 3.5740784083775354 22.35909578897345 0.036602020263671875 3 0.9740162326061002 7.63952601092541 17628.0 36.64134630271617 0.0 - - - - - - - 779.625 35 8 RPA1 replication protein A1, 70kDa 1889 238 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A439.[MT7]-LFSLELVDESGEIR.2y6_1.heavy 875.971 / 690.342 20612.0 40.83594989776611 43 17 10 6 10 3.5740784083775354 22.35909578897345 0.036602020263671875 3 0.9740162326061002 7.63952601092541 20612.0 34.44431262841495 0.0 - - - - - - - 723.2666666666667 41 15 RPA1 replication protein A1, 70kDa 1891 238 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A439.[MT7]-LFSLELVDESGEIR.2y10_1.heavy 875.971 / 1146.56 20883.0 40.83594989776611 43 17 10 6 10 3.5740784083775354 22.35909578897345 0.036602020263671875 3 0.9740162326061002 7.63952601092541 20883.0 50.08206006896134 0.0 - - - - - - - 617.4444444444445 41 9 RPA1 replication protein A1, 70kDa 1893 239 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A336.[MT7]-C[CAM]DYTIQVQLR.2b3_1.heavy 720.375 / 583.23 5667.0 29.56410026550293 43 13 10 10 10 1.3418890196507602 53.506709632878184 0.0 3 0.9211597806282462 4.366092908743886 5667.0 19.312450274730846 0.0 - - - - - - - 333.0 11 3 PIAS3 protein inhibitor of activated STAT, 3 1895 239 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A336.[MT7]-C[CAM]DYTIQVQLR.2b4_1.heavy 720.375 / 684.278 6000.0 29.56410026550293 43 13 10 10 10 1.3418890196507602 53.506709632878184 0.0 3 0.9211597806282462 4.366092908743886 6000.0 8.625 0.0 - - - - - - - 333.0 12 4 PIAS3 protein inhibitor of activated STAT, 3 1897 239 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A336.[MT7]-C[CAM]DYTIQVQLR.2y6_1.heavy 720.375 / 756.473 4667.0 29.56410026550293 43 13 10 10 10 1.3418890196507602 53.506709632878184 0.0 3 0.9211597806282462 4.366092908743886 4667.0 7.650521439280359 0.0 - - - - - - - 333.0 9 3 PIAS3 protein inhibitor of activated STAT, 3 1899 239 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A336.[MT7]-C[CAM]DYTIQVQLR.2y7_1.heavy 720.375 / 857.52 10667.0 29.56410026550293 43 13 10 10 10 1.3418890196507602 53.506709632878184 0.0 3 0.9211597806282462 4.366092908743886 10667.0 23.51461927700816 0.0 - - - - - - - 333.0 21 5 PIAS3 protein inhibitor of activated STAT, 3 1901 240 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A335.[MT7]-SLC[CAM]AAELVC[CAM]K[MT7].3b6_1.heavy 480.259 / 776.373 23667.0 28.516399383544922 48 18 10 10 10 2.692273264213986 25.129175503783337 0.0 3 0.983896203518189 9.712112153309956 23667.0 95.89934762348557 0.0 - - - - - - - 333.0 47 4 FBXW11;BTRC F-box and WD repeat domain containing 11;beta-transducin repeat containing 1903 240 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A335.[MT7]-SLC[CAM]AAELVC[CAM]K[MT7].3b4_1.heavy 480.259 / 576.293 32333.0 28.516399383544922 48 18 10 10 10 2.692273264213986 25.129175503783337 0.0 3 0.983896203518189 9.712112153309956 32333.0 116.49783364760108 0.0 - - - - - - - 333.0 64 4 FBXW11;BTRC F-box and WD repeat domain containing 11;beta-transducin repeat containing 1905 240 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A335.[MT7]-SLC[CAM]AAELVC[CAM]K[MT7].3b5_1.heavy 480.259 / 647.33 29667.0 28.516399383544922 48 18 10 10 10 2.692273264213986 25.129175503783337 0.0 3 0.983896203518189 9.712112153309956 29667.0 65.17633468149646 0.0 - - - - - - - 333.0 59 3 FBXW11;BTRC F-box and WD repeat domain containing 11;beta-transducin repeat containing 1907 240 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A335.[MT7]-SLC[CAM]AAELVC[CAM]K[MT7].3b3_1.heavy 480.259 / 505.256 21000.0 28.516399383544922 48 18 10 10 10 2.692273264213986 25.129175503783337 0.0 3 0.983896203518189 9.712112153309956 21000.0 44.71898334403691 0.0 - - - - - - - 333.0 42 2 FBXW11;BTRC F-box and WD repeat domain containing 11;beta-transducin repeat containing 1909 241 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A331.[MT7]-LSPENEPDLK[MT7].3y3_1.heavy 477.264 / 519.326 11815.0 24.909799575805664 42 20 9 5 8 5.508511479984134 18.153724533998435 0.044399261474609375 4 0.9932680726147668 15.033106028477901 11815.0 7.964452095508705 3.0 - - - - - - - 303.0 44 5 UBE3C ubiquitin protein ligase E3C 1911 241 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A331.[MT7]-LSPENEPDLK[MT7].3b4_1.heavy 477.264 / 571.321 13027.0 24.909799575805664 42 20 9 5 8 5.508511479984134 18.153724533998435 0.044399261474609375 4 0.9932680726147668 15.033106028477901 13027.0 14.09232294620307 1.0 - - - - - - - 303.0 27 2 UBE3C ubiquitin protein ligase E3C 1913 241 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A331.[MT7]-LSPENEPDLK[MT7].3b5_1.heavy 477.264 / 685.364 15147.0 24.909799575805664 42 20 9 5 8 5.508511479984134 18.153724533998435 0.044399261474609375 4 0.9932680726147668 15.033106028477901 15147.0 26.636696670739877 0.0 - - - - - - - 303.0 30 1 UBE3C ubiquitin protein ligase E3C 1915 241 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A331.[MT7]-LSPENEPDLK[MT7].3y4_1.heavy 477.264 / 616.379 18480.0 24.909799575805664 42 20 9 5 8 5.508511479984134 18.153724533998435 0.044399261474609375 4 0.9932680726147668 15.033106028477901 18480.0 19.590800670464642 1.0 - - - - - - - 303.0 36 2 UBE3C ubiquitin protein ligase E3C 1917 242 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A334.[MT7]-FSAIQC[CAM]AAAVPR.2y8_1.heavy 717.886 / 872.441 33000.0 28.963899612426758 40 10 10 10 10 3.0269726188585397 33.03630808451437 0.0 3 0.8220436449387818 2.8810055518505364 33000.0 55.61069392348087 0.0 - - - - - - - 333.0 66 2 POLD3 polymerase (DNA-directed), delta 3, accessory subunit 1919 242 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A334.[MT7]-FSAIQC[CAM]AAAVPR.2y9_1.heavy 717.886 / 985.525 17333.0 28.963899612426758 40 10 10 10 10 3.0269726188585397 33.03630808451437 0.0 3 0.8220436449387818 2.8810055518505364 17333.0 67.47690054054054 0.0 - - - - - - - 333.0 34 4 POLD3 polymerase (DNA-directed), delta 3, accessory subunit 1921 242 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A334.[MT7]-FSAIQC[CAM]AAAVPR.2y11_1.heavy 717.886 / 1143.59 15667.0 28.963899612426758 40 10 10 10 10 3.0269726188585397 33.03630808451437 0.0 3 0.8220436449387818 2.8810055518505364 15667.0 57.39050080087589 0.0 - - - - - - - 333.0 31 2 POLD3 polymerase (DNA-directed), delta 3, accessory subunit 1923 242 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A334.[MT7]-FSAIQC[CAM]AAAVPR.2y7_1.heavy 717.886 / 744.382 21333.0 28.963899612426758 40 10 10 10 10 3.0269726188585397 33.03630808451437 0.0 3 0.8220436449387818 2.8810055518505364 21333.0 46.387124026133975 0.0 - - - - - - - 333.0 42 2 POLD3 polymerase (DNA-directed), delta 3, accessory subunit 1925 243 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A431.[MT7]-ISPGGISQILDLVK[MT7].3b6_1.heavy 576.688 / 669.405 118866.0 43.93165111541748 42 16 10 6 10 3.225488052627742 31.00306011629215 0.033397674560546875 3 0.9655721618805763 6.632138220685088 118866.0 599.5915663160779 0.0 - - - - - - - 200.5 237 8 PRIM2 primase, DNA, polypeptide 2 (58kDa) 1927 243 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A431.[MT7]-ISPGGISQILDLVK[MT7].3b5_1.heavy 576.688 / 556.321 193358.0 43.93165111541748 42 16 10 6 10 3.225488052627742 31.00306011629215 0.033397674560546875 3 0.9655721618805763 6.632138220685088 193358.0 1941.3662326869803 0.0 - - - - - - - 117.75 386 4 PRIM2 primase, DNA, polypeptide 2 (58kDa) 1929 243 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A431.[MT7]-ISPGGISQILDLVK[MT7].3y4_1.heavy 576.688 / 618.394 177024.0 43.93165111541748 42 16 10 6 10 3.225488052627742 31.00306011629215 0.033397674560546875 3 0.9655721618805763 6.632138220685088 177024.0 908.7895266610911 0.0 - - - - - - - 141.5 354 4 PRIM2 primase, DNA, polypeptide 2 (58kDa) 1931 243 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A431.[MT7]-ISPGGISQILDLVK[MT7].3y5_1.heavy 576.688 / 731.478 158330.0 43.93165111541748 42 16 10 6 10 3.225488052627742 31.00306011629215 0.033397674560546875 3 0.9655721618805763 6.632138220685088 158330.0 1576.565101875737 0.0 - - - - - - - 188.75 316 4 PRIM2 primase, DNA, polypeptide 2 (58kDa) 1933 244 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A430.[MT7]-NFPALLSTGEFLK[MT7].3y3_1.heavy 575.666 / 551.367 91217.0 40.285400390625 46 16 10 10 10 2.8977758482759897 27.844475013949168 0.0 3 0.9699908822806105 7.1063020805965165 91217.0 251.1843052367218 0.0 - - - - - - - 330.75 182 4 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 1935 244 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A430.[MT7]-NFPALLSTGEFLK[MT7].3b4_1.heavy 575.666 / 574.311 142269.0 40.285400390625 46 16 10 10 10 2.8977758482759897 27.844475013949168 0.0 3 0.9699908822806105 7.1063020805965165 142269.0 287.844102679005 0.0 - - - - - - - 264.6 284 5 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 1937 244 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A430.[MT7]-NFPALLSTGEFLK[MT7].3b5_1.heavy 575.666 / 687.395 165515.0 40.285400390625 46 16 10 10 10 2.8977758482759897 27.844475013949168 0.0 3 0.9699908822806105 7.1063020805965165 165515.0 400.1451726881633 0.0 - - - - - - - 294.0 331 3 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 1939 244 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A430.[MT7]-NFPALLSTGEFLK[MT7].3y5_1.heavy 575.666 / 737.431 69443.0 40.285400390625 46 16 10 10 10 2.8977758482759897 27.844475013949168 0.0 3 0.9699908822806105 7.1063020805965165 69443.0 139.09565887297373 0.0 - - - - - - - 220.5 138 8 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 1941 245 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A433.[MT7]-EAISLVC[CAM]EAVPGAK[MT7].3b6_1.heavy 577.99 / 757.458 33532.0 32.16740036010742 46 16 10 10 10 3.449791106211253 28.987262393932426 0.0 3 0.963051230972392 6.400531075848521 33532.0 137.38398667484762 0.0 - - - - - - - 316.0 67 3 SHC1 SHC (Src homology 2 domain containing) transforming protein 1 1943 245 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A433.[MT7]-EAISLVC[CAM]EAVPGAK[MT7].3b4_1.heavy 577.99 / 545.305 18348.0 32.16740036010742 46 16 10 10 10 3.449791106211253 28.987262393932426 0.0 3 0.963051230972392 6.400531075848521 18348.0 31.329598262857985 0.0 - - - - - - - 678.1428571428571 36 7 SHC1 SHC (Src homology 2 domain containing) transforming protein 1 1945 245 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A433.[MT7]-EAISLVC[CAM]EAVPGAK[MT7].3b5_1.heavy 577.99 / 658.389 33848.0 32.16740036010742 46 16 10 10 10 3.449791106211253 28.987262393932426 0.0 3 0.963051230972392 6.400531075848521 33848.0 28.736340743938413 0.0 - - - - - - - 316.0 67 3 SHC1 SHC (Src homology 2 domain containing) transforming protein 1 1947 245 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A433.[MT7]-EAISLVC[CAM]EAVPGAK[MT7].3y4_1.heavy 577.99 / 516.326 134443.0 32.16740036010742 46 16 10 10 10 3.449791106211253 28.987262393932426 0.0 3 0.963051230972392 6.400531075848521 134443.0 109.04638918814652 0.0 - - - - - - - 316.0 268 3 SHC1 SHC (Src homology 2 domain containing) transforming protein 1 1949 246 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A432.[MT7]-LQLVGITALLLASK[MT7].3b6_1.heavy 576.713 / 768.51 13770.0 47.892601013183594 38 12 10 6 10 1.3814537576659176 57.51142190976992 0.033203125 3 0.888034626210478 3.6532761130139875 13770.0 75.96422986379686 0.0 - - - - - - - 239.0 27 15 CCNB2 cyclin B2 1951 246 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A432.[MT7]-LQLVGITALLLASK[MT7].3b4_1.heavy 576.713 / 598.404 18777.0 47.892601013183594 38 12 10 6 10 1.3814537576659176 57.51142190976992 0.033203125 3 0.888034626210478 3.6532761130139875 18777.0 134.67666666666668 0.0 - - - - - - - 197.33333333333334 37 15 CCNB2 cyclin B2 1953 246 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A432.[MT7]-LQLVGITALLLASK[MT7].3b5_1.heavy 576.713 / 655.426 25889.0 47.892601013183594 38 12 10 6 10 1.3814537576659176 57.51142190976992 0.033203125 3 0.888034626210478 3.6532761130139875 25889.0 509.0159945638745 0.0 - - - - - - - 220.5625 51 16 CCNB2 cyclin B2 1955 246 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A432.[MT7]-LQLVGITALLLASK[MT7].3y4_1.heavy 576.713 / 562.368 46373.0 47.892601013183594 38 12 10 6 10 1.3814537576659176 57.51142190976992 0.033203125 3 0.888034626210478 3.6532761130139875 46373.0 435.32680545466553 0.0 - - - - - - - 267.0 92 13 CCNB2 cyclin B2 1957 247 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A435.[MT7]-ESQVSILQSLFGER.3y7_1.heavy 579.648 / 836.426 44253.0 43.619300842285156 50 20 10 10 10 8.870796800470574 11.272944499720165 0.0 3 0.9960021732361267 19.512170932599293 44253.0 273.4082888522882 0.0 - - - - - - - 253.0 88 13 ORC5 origin recognition complex, subunit 5 1959 247 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A435.[MT7]-ESQVSILQSLFGER.3y6_1.heavy 579.648 / 708.367 63888.0 43.619300842285156 50 20 10 10 10 8.870796800470574 11.272944499720165 0.0 3 0.9960021732361267 19.512170932599293 63888.0 160.7013357396828 0.0 - - - - - - - 276.0769230769231 127 13 ORC5 origin recognition complex, subunit 5 1961 247 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A435.[MT7]-ESQVSILQSLFGER.3b4_1.heavy 579.648 / 588.311 38173.0 43.619300842285156 50 20 10 10 10 8.870796800470574 11.272944499720165 0.0 3 0.9960021732361267 19.512170932599293 38173.0 118.09372909698996 0.0 - - - - - - - 653.3333333333334 76 9 ORC5 origin recognition complex, subunit 5 1963 247 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A435.[MT7]-ESQVSILQSLFGER.3b5_1.heavy 579.648 / 675.343 45150.0 43.619300842285156 50 20 10 10 10 8.870796800470574 11.272944499720165 0.0 3 0.9960021732361267 19.512170932599293 45150.0 137.20132797270955 0.0 - - - - - - - 279.1 90 10 ORC5 origin recognition complex, subunit 5 1965 248 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A436.[MT7]-FIDTGFTLPFYK[MT7].3b6_1.heavy 579.655 / 825.426 7607.0 42.37289810180664 48 18 10 10 10 5.5369060849260805 18.060627806609265 0.0 3 0.9899596652396477 12.306207415531984 7607.0 38.44971107264201 0.0 - - - - - - - 213.125 15 8 WWP2 WW domain containing E3 ubiquitin protein ligase 2 1967 248 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A436.[MT7]-FIDTGFTLPFYK[MT7].3y3_1.heavy 579.655 / 601.347 15556.0 42.37289810180664 48 18 10 10 10 5.5369060849260805 18.060627806609265 0.0 3 0.9899596652396477 12.306207415531984 15556.0 165.94148697735528 0.0 - - - - - - - 236.75 31 12 WWP2 WW domain containing E3 ubiquitin protein ligase 2 1969 248 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A436.[MT7]-FIDTGFTLPFYK[MT7].3b5_1.heavy 579.655 / 678.358 16464.0 42.37289810180664 48 18 10 10 10 5.5369060849260805 18.060627806609265 0.0 3 0.9899596652396477 12.306207415531984 16464.0 36.74784140969163 0.0 - - - - - - - 247.9090909090909 32 11 WWP2 WW domain containing E3 ubiquitin protein ligase 2 1971 248 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A436.[MT7]-FIDTGFTLPFYK[MT7].3y4_1.heavy 579.655 / 698.399 37129.0 42.37289810180664 48 18 10 10 10 5.5369060849260805 18.060627806609265 0.0 3 0.9899596652396477 12.306207415531984 37129.0 81.52064760479871 0.0 - - - - - - - 293.5833333333333 74 12 WWP2 WW domain containing E3 ubiquitin protein ligase 2 1973 249 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9091.[MT7]-VFYLK[MT7].2b3_1.heavy 479.304 / 554.31 32333.0 31.235200881958008 50 20 10 10 10 12.01585709761771 8.322335992147096 0.0 3 0.9952273501945401 17.85704964168032 32333.0 127.48911609609608 0.0 - - - - - - - 333.0 64 5 YWHAQ;SFN;YWHAB;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;stratifin;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 1975 249 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9091.[MT7]-VFYLK[MT7].2y4_1.heavy 479.304 / 714.431 189000.0 31.235200881958008 50 20 10 10 10 12.01585709761771 8.322335992147096 0.0 3 0.9952273501945401 17.85704964168032 189000.0 300.8188958832377 0.0 - - - - - - - 333.0 378 3 YWHAQ;SFN;YWHAB;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;stratifin;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 1977 249 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9091.[MT7]-VFYLK[MT7].2b4_1.heavy 479.304 / 667.394 7667.0 31.235200881958008 50 20 10 10 10 12.01585709761771 8.322335992147096 0.0 3 0.9952273501945401 17.85704964168032 7667.0 1.374777883521258 1.0 - - - - - - - 333.0 19 3 YWHAQ;SFN;YWHAB;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;stratifin;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 1979 249 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9091.[MT7]-VFYLK[MT7].2y3_1.heavy 479.304 / 567.362 83667.0 31.235200881958008 50 20 10 10 10 12.01585709761771 8.322335992147096 0.0 3 0.9952273501945401 17.85704964168032 83667.0 329.89671972972974 0.0 - - - - - - - 333.0 167 4 YWHAQ;SFN;YWHAB;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;stratifin;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 1981 250 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A440.[MT7]-NFRDLLTDEPFSR.3y6_1.heavy 585.305 / 750.342 6146.0 35.0797004699707 48 18 10 10 10 5.210238189179949 19.192980506662636 0.0 3 0.9865453575843811 10.627672049517503 6146.0 12.00390625 1.0 - - - - - - - 256.0 12 7 PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2 1983 250 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A440.[MT7]-NFRDLLTDEPFSR.3b4_1.heavy 585.305 / 677.349 3073.0 35.0797004699707 48 18 10 10 10 5.210238189179949 19.192980506662636 0.0 3 0.9865453575843811 10.627672049517503 3073.0 7.2823697916666665 1.0 - - - - - - - 256.0 6 3 PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2 1985 250 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A440.[MT7]-NFRDLLTDEPFSR.3y4_1.heavy 585.305 / 506.272 30471.0 35.0797004699707 48 18 10 10 10 5.210238189179949 19.192980506662636 0.0 3 0.9865453575843811 10.627672049517503 30471.0 32.52746022259334 0.0 - - - - - - - 256.0 60 6 PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2 1987 250 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A440.[MT7]-NFRDLLTDEPFSR.3y5_1.heavy 585.305 / 635.315 15876.0 35.0797004699707 48 18 10 10 10 5.210238189179949 19.192980506662636 0.0 3 0.9865453575843811 10.627672049517503 15876.0 36.17578125 0.0 - - - - - - - 256.0 31 6 PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2 1989 251 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9092.[MT7]-LLLAIK[MT7].2b3_1.heavy 479.849 / 484.362 37877.0 34.99340057373047 48 18 10 10 10 4.70719203807718 21.244087598526903 0.0 3 0.9824832529741153 9.311071096059008 37877.0 49.091071940923314 0.0 - - - - - - - 253.0 75 5 UBR5;LOC730429 ubiquitin protein ligase E3 component n-recognin 5;e3 ubiquitin-protein ligase UBR5-like 1991 251 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9092.[MT7]-LLLAIK[MT7].2y4_1.heavy 479.849 / 588.42 58331.0 34.99340057373047 48 18 10 10 10 4.70719203807718 21.244087598526903 0.0 3 0.9824832529741153 9.311071096059008 58331.0 179.75804185062304 0.0 - - - - - - - 253.0 116 3 UBR5;LOC730429 ubiquitin protein ligase E3 component n-recognin 5;e3 ubiquitin-protein ligase UBR5-like 1993 251 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9092.[MT7]-LLLAIK[MT7].2y5_1.heavy 479.849 / 701.504 53028.0 34.99340057373047 48 18 10 10 10 4.70719203807718 21.244087598526903 0.0 3 0.9824832529741153 9.311071096059008 53028.0 244.03920150275897 0.0 - - - - - - - 253.0 106 4 UBR5;LOC730429 ubiquitin protein ligase E3 component n-recognin 5;e3 ubiquitin-protein ligase UBR5-like 1995 251 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9092.[MT7]-LLLAIK[MT7].2b4_1.heavy 479.849 / 555.399 28534.0 34.99340057373047 48 18 10 10 10 4.70719203807718 21.244087598526903 0.0 3 0.9824832529741153 9.311071096059008 28534.0 68.7452805280528 0.0 - - - - - - - 253.0 57 3 UBR5;LOC730429 ubiquitin protein ligase E3 component n-recognin 5;e3 ubiquitin-protein ligase UBR5-like 1997 252 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9294.[MT7]-DSSGTAVAPENR.2y4_1.heavy 674.335 / 515.257 8218.0 15.799500465393066 43 13 10 10 10 6.202193392580885 16.123328259905733 0.0 3 0.9013443214815634 3.8964083423437925 8218.0 30.666378669759247 0.0 - - - - - - - 249.33333333333334 16 9 WWP2 WW domain containing E3 ubiquitin protein ligase 2 1999 252 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9294.[MT7]-DSSGTAVAPENR.2y5_1.heavy 674.335 / 586.294 8405.0 15.799500465393066 43 13 10 10 10 6.202193392580885 16.123328259905733 0.0 3 0.9013443214815634 3.8964083423437925 8405.0 26.898349568519322 0.0 - - - - - - - 240.42857142857142 16 7 WWP2 WW domain containing E3 ubiquitin protein ligase 2 2001 252 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9294.[MT7]-DSSGTAVAPENR.2b6_1.heavy 674.335 / 663.307 6724.0 15.799500465393066 43 13 10 10 10 6.202193392580885 16.123328259905733 0.0 3 0.9013443214815634 3.8964083423437925 6724.0 49.62096256684492 0.0 - - - - - - - 240.42857142857142 13 7 WWP2 WW domain containing E3 ubiquitin protein ligase 2 2003 252 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9294.[MT7]-DSSGTAVAPENR.2y11_1.heavy 674.335 / 1088.53 3362.0 15.799500465393066 43 13 10 10 10 6.202193392580885 16.123328259905733 0.0 3 0.9013443214815634 3.8964083423437925 3362.0 32.90085561497327 0.0 - - - - - - - 233.75 6 4 WWP2 WW domain containing E3 ubiquitin protein ligase 2 2005 253 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9093.[MT7]-LAEQAER.2y4_1.heavy 480.765 / 503.257 29492.0 17.82159996032715 45 20 10 5 10 14.366470946432601 6.960651671023733 0.049800872802734375 3 0.9967348746876374 21.592066209644425 29492.0 65.77100830367735 0.0 - - - - - - - 281.0 58 6 YWHAQ;SFN;YWHAB;YWHAE;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;stratifin;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 2007 253 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9093.[MT7]-LAEQAER.2y5_1.heavy 480.765 / 632.3 24647.0 17.82159996032715 45 20 10 5 10 14.366470946432601 6.960651671023733 0.049800872802734375 3 0.9967348746876374 21.592066209644425 24647.0 50.63871832224845 0.0 - - - - - - - 692.2857142857143 49 7 YWHAQ;SFN;YWHAB;YWHAE;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;stratifin;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 2009 253 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9093.[MT7]-LAEQAER.2b4_1.heavy 480.765 / 586.332 25279.0 17.82159996032715 45 20 10 5 10 14.366470946432601 6.960651671023733 0.049800872802734375 3 0.9967348746876374 21.592066209644425 25279.0 38.198488924050636 0.0 - - - - - - - 361.0 50 7 YWHAQ;SFN;YWHAB;YWHAE;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;stratifin;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 2011 253 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9093.[MT7]-LAEQAER.2y6_1.heavy 480.765 / 703.337 132714.0 17.82159996032715 45 20 10 5 10 14.366470946432601 6.960651671023733 0.049800872802734375 3 0.9967348746876374 21.592066209644425 132714.0 208.19399144801613 0.0 - - - - - - - 421.0 265 2 YWHAQ;SFN;YWHAB;YWHAE;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;stratifin;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 2013 254 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9295.[MT7]-ENLVFLAQK[MT7].2y4_1.heavy 675.405 / 603.395 10074.0 32.40650177001953 48 18 10 10 10 5.680647487077992 17.603627091361364 0.0 3 0.9881649082114102 11.33306281320275 10074.0 10.242033359809373 3.0 - - - - - - - 315.0 35 2 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 2015 254 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9295.[MT7]-ENLVFLAQK[MT7].2b3_1.heavy 675.405 / 501.279 37777.0 32.40650177001953 48 18 10 10 10 5.680647487077992 17.603627091361364 0.0 3 0.9881649082114102 11.33306281320275 37777.0 79.52667658982271 0.0 - - - - - - - 764.5714285714286 75 7 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 2017 254 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9295.[MT7]-ENLVFLAQK[MT7].2y5_1.heavy 675.405 / 750.463 28648.0 32.40650177001953 48 18 10 10 10 5.680647487077992 17.603627091361364 0.0 3 0.9881649082114102 11.33306281320275 28648.0 43.688768864177916 0.0 - - - - - - - 315.0 57 3 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 2019 254 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9295.[MT7]-ENLVFLAQK[MT7].2b4_1.heavy 675.405 / 600.347 27703.0 32.40650177001953 48 18 10 10 10 5.680647487077992 17.603627091361364 0.0 3 0.9881649082114102 11.33306281320275 27703.0 29.402938088193583 0.0 - - - - - - - 315.0 55 2 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 2021 255 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9094.[MT7]-AINQAGSR.2y5_1.heavy 480.771 / 518.268 6655.0 14.846599578857422 50 20 10 10 10 11.821023152550513 8.45950462235783 0.0 3 0.9905619955453274 12.693462824402278 6655.0 11.474137931034484 0.0 - - - - - - - 243.375 13 8 MID2;MID1 midline 2;midline 1 (Opitz/BBB syndrome) 2023 255 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9094.[MT7]-AINQAGSR.2b4_1.heavy 480.771 / 571.332 6330.0 14.846599578857422 50 20 10 10 10 11.821023152550513 8.45950462235783 0.0 3 0.9905619955453274 12.693462824402278 6330.0 37.74266663872473 1.0 - - - - - - - 342.77777777777777 15 9 MID2;MID1 midline 2;midline 1 (Opitz/BBB syndrome) 2025 255 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9094.[MT7]-AINQAGSR.2y6_1.heavy 480.771 / 632.311 24510.0 14.846599578857422 50 20 10 10 10 11.821023152550513 8.45950462235783 0.0 3 0.9905619955453274 12.693462824402278 24510.0 64.03851738740747 1.0 - - - - - - - 270.4166666666667 49 12 MID2;MID1 midline 2;midline 1 (Opitz/BBB syndrome) 2027 255 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9094.[MT7]-AINQAGSR.2y7_1.heavy 480.771 / 745.395 24672.0 14.846599578857422 50 20 10 10 10 11.821023152550513 8.45950462235783 0.0 3 0.9905619955453274 12.693462824402278 24672.0 40.39605633802817 0.0 - - - - - - - 255.0 49 7 MID2;MID1 midline 2;midline 1 (Opitz/BBB syndrome) 2029 256 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9290.[MT7]-GLFPFTHVK[MT7].3y3_1.heavy 445.267 / 527.342 51124.0 33.185550689697266 41 16 10 5 10 4.759623479036107 21.010065279418164 0.04949951171875 3 0.9678194592294529 6.861105786726693 51124.0 75.05130500593182 0.0 - - - - - - - 306.0 102 4 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 2031 256 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9290.[MT7]-GLFPFTHVK[MT7].3b5_1.heavy 445.267 / 706.404 24491.0 33.185550689697266 41 16 10 5 10 4.759623479036107 21.010065279418164 0.04949951171875 3 0.9678194592294529 6.861105786726693 24491.0 159.27153594771244 0.0 - - - - - - - 306.0 48 3 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 2033 256 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9290.[MT7]-GLFPFTHVK[MT7].3y4_1.heavy 445.267 / 628.39 22348.0 33.185550689697266 41 16 10 5 10 4.759623479036107 21.010065279418164 0.04949951171875 3 0.9678194592294529 6.861105786726693 22348.0 89.08496465252769 0.0 - - - - - - - 306.0 44 6 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 2035 256 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9290.[MT7]-GLFPFTHVK[MT7].3b3_1.heavy 445.267 / 462.283 112045.0 33.185550689697266 41 16 10 5 10 4.759623479036107 21.010065279418164 0.04949951171875 3 0.9678194592294529 6.861105786726693 112045.0 214.19388900050666 0.0 - - - - - - - 306.0 224 4 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 2037 257 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9291.[MT7]-LLQFVTGTC[CAM]R.2y8_1.heavy 669.87 / 968.462 14216.0 36.5546989440918 45 17 10 10 8 2.323535510793038 30.754069331043254 0.0 4 0.9730391583541468 7.4992018354933645 14216.0 37.89826679965294 1.0 - - - - - - - 333.0 28 6 WWP1;WWP2;ITCH WW domain containing E3 ubiquitin protein ligase 1;WW domain containing E3 ubiquitin protein ligase 2;itchy E3 ubiquitin protein ligase homolog (mouse) 2039 257 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9291.[MT7]-LLQFVTGTC[CAM]R.2y5_1.heavy 669.87 / 594.266 11551.0 36.5546989440918 45 17 10 10 8 2.323535510793038 30.754069331043254 0.0 4 0.9730391583541468 7.4992018354933645 11551.0 16.46304312801873 0.0 - - - - - - - 348.85714285714283 23 7 WWP1;WWP2;ITCH WW domain containing E3 ubiquitin protein ligase 1;WW domain containing E3 ubiquitin protein ligase 2;itchy E3 ubiquitin protein ligase homolog (mouse) 2041 257 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9291.[MT7]-LLQFVTGTC[CAM]R.2y9_1.heavy 669.87 / 1081.55 13106.0 36.5546989440918 45 17 10 10 8 2.323535510793038 30.754069331043254 0.0 4 0.9730391583541468 7.4992018354933645 13106.0 37.17742903758652 1.0 - - - - - - - 266.4 30 5 WWP1;WWP2;ITCH WW domain containing E3 ubiquitin protein ligase 1;WW domain containing E3 ubiquitin protein ligase 2;itchy E3 ubiquitin protein ligase homolog (mouse) 2043 257 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9291.[MT7]-LLQFVTGTC[CAM]R.2y7_1.heavy 669.87 / 840.403 16882.0 36.5546989440918 45 17 10 10 8 2.323535510793038 30.754069331043254 0.0 4 0.9730391583541468 7.4992018354933645 16882.0 97.33765765765764 0.0 - - - - - - - 296.0 33 6 WWP1;WWP2;ITCH WW domain containing E3 ubiquitin protein ligase 1;WW domain containing E3 ubiquitin protein ligase 2;itchy E3 ubiquitin protein ligase homolog (mouse) 2045 258 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9098.[MT7]-TTNVNK[MT7].2y4_1.heavy 482.787 / 618.369 14770.0 14.416299819946289 50 20 10 10 10 7.817185451485285 12.792327957500323 0.0 3 0.9945850540724585 16.763671405366246 14770.0 19.984196202399147 0.0 - - - - - - - 255.85714285714286 29 14 CCNB2 cyclin B2 2047 258 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9098.[MT7]-TTNVNK[MT7].2y5_1.heavy 482.787 / 719.417 38001.0 14.416299819946289 50 20 10 10 10 7.817185451485285 12.792327957500323 0.0 3 0.9945850540724585 16.763671405366246 38001.0 57.635113306217306 0.0 - - - - - - - 322.5 76 8 CCNB2 cyclin B2 2049 258 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9098.[MT7]-TTNVNK[MT7].2b4_1.heavy 482.787 / 560.316 17065.0 14.416299819946289 50 20 10 10 10 7.817185451485285 12.792327957500323 0.0 3 0.9945850540724585 16.763671405366246 17065.0 43.41735915715404 0.0 - - - - - - - 696.5714285714286 34 7 CCNB2 cyclin B2 2051 258 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9098.[MT7]-TTNVNK[MT7].2y3_1.heavy 482.787 / 504.326 16348.0 14.416299819946289 50 20 10 10 10 7.817185451485285 12.792327957500323 0.0 3 0.9945850540724585 16.763671405366246 16348.0 108.59064388096645 0.0 - - - - - - - 232.875 32 8 CCNB2 cyclin B2 2053 259 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9297.[MT7]-QQQLGQELK[MT7].2b8_1.heavy 680.395 / 1069.58 8540.0 22.629499435424805 45 20 10 5 10 14.716428354290803 6.7951270235242545 0.040599822998046875 3 0.9900629911503349 12.370129385111397 8540.0 58.85243445692884 0.0 - - - - - - - 267.0 17 4 E2F2 E2F transcription factor 2 2055 259 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9297.[MT7]-QQQLGQELK[MT7].2b3_1.heavy 680.395 / 529.285 26153.0 22.629499435424805 45 20 10 5 10 14.716428354290803 6.7951270235242545 0.040599822998046875 3 0.9900629911503349 12.370129385111397 26153.0 105.79916401349888 0.0 - - - - - - - 652.6666666666666 52 9 E2F2 E2F transcription factor 2 2057 259 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9297.[MT7]-QQQLGQELK[MT7].2y5_1.heavy 680.395 / 718.422 33091.0 22.629499435424805 45 20 10 5 10 14.716428354290803 6.7951270235242545 0.040599822998046875 3 0.9900629911503349 12.370129385111397 33091.0 129.60767726102543 0.0 - - - - - - - 600.75 66 8 E2F2 E2F transcription factor 2 2059 259 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9297.[MT7]-QQQLGQELK[MT7].2y6_1.heavy 680.395 / 831.506 16546.0 22.629499435424805 45 20 10 5 10 14.716428354290803 6.7951270235242545 0.040599822998046875 3 0.9900629911503349 12.370129385111397 16546.0 44.20529338327091 0.0 - - - - - - - 267.0 33 5 E2F2 E2F transcription factor 2 2061 260 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A301.[MT7]-LEEYITTSK[MT7].2y4_1.heavy 686.384 / 580.342 30000.0 28.662200927734375 46 16 10 10 10 2.0360326070727277 34.07855578762327 0.0 3 0.9693678727233792 7.033296047395935 30000.0 80.89160939130939 1.0 - - - - - - - 333.0 63 5 SMC1A structural maintenance of chromosomes 1A 2063 260 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A301.[MT7]-LEEYITTSK[MT7].2b3_1.heavy 686.384 / 516.279 27333.0 28.662200927734375 46 16 10 10 10 2.0360326070727277 34.07855578762327 0.0 3 0.9693678727233792 7.033296047395935 27333.0 33.86711805125847 0.0 - - - - - - - 667.0 54 4 SMC1A structural maintenance of chromosomes 1A 2065 260 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A301.[MT7]-LEEYITTSK[MT7].2y5_1.heavy 686.384 / 693.426 20333.0 28.662200927734375 46 16 10 10 10 2.0360326070727277 34.07855578762327 0.0 3 0.9693678727233792 7.033296047395935 20333.0 41.949959636258654 0.0 - - - - - - - 333.0 40 4 SMC1A structural maintenance of chromosomes 1A 2067 260 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A301.[MT7]-LEEYITTSK[MT7].2b4_1.heavy 686.384 / 679.342 28000.0 28.662200927734375 46 16 10 10 10 2.0360326070727277 34.07855578762327 0.0 3 0.9693678727233792 7.033296047395935 28000.0 20.601543077582512 0.0 - - - - - - - 333.0 56 2 SMC1A structural maintenance of chromosomes 1A 2069 261 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A305.[MT7]-ATIISEQQAK[MT7].3y3_1.heavy 459.604 / 490.311 34771.0 22.091699600219727 39 17 2 10 10 2.6983867414157245 29.246820025971132 0.0 3 0.9799315426563044 8.69713849907638 34771.0 83.93476795200408 0.0 - - - - - - - 632.2 69 10 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 2071 261 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A305.[MT7]-ATIISEQQAK[MT7].3b4_1.heavy 459.604 / 543.362 47415.0 22.091699600219727 39 17 2 10 10 2.6983867414157245 29.246820025971132 0.0 3 0.9799315426563044 8.69713849907638 47415.0 100.65423342060384 0.0 - - - - - - - 643.8888888888889 94 9 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 2073 261 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A305.[MT7]-ATIISEQQAK[MT7].3b5_1.heavy 459.604 / 630.394 25551.0 22.091699600219727 39 17 2 10 10 2.6983867414157245 29.246820025971132 0.0 3 0.9799315426563044 8.69713849907638 25551.0 44.85275808748105 0.0 - - - - - - - 263.0 51 8 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 2075 261 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A305.[MT7]-ATIISEQQAK[MT7].3y1_1.heavy 459.604 / 291.215 N/A 22.091699600219727 39 17 2 10 10 2.6983867414157245 29.246820025971132 0.0 3 0.9799315426563044 8.69713849907638 84820.0 7.160212587997716 1.0 - - - - - - - 2766.0 530 2 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 2077 262 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A303.[MT7]-LLLEQILNK[MT7].2b4_1.heavy 686.444 / 613.404 30924.0 41.101898193359375 45 15 10 10 10 11.62955698834575 8.598779824563596 0.0 3 0.9510719299681096 5.556437830004014 30924.0 49.439610740187526 0.0 - - - - - - - 731.1111111111111 61 9 ORC5 origin recognition complex, subunit 5 2079 262 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A303.[MT7]-LLLEQILNK[MT7].2y3_1.heavy 686.444 / 518.342 34214.0 41.101898193359375 45 15 10 10 10 11.62955698834575 8.598779824563596 0.0 3 0.9510719299681096 5.556437830004014 34214.0 51.139713299926065 0.0 - - - - - - - 679.9166666666666 68 12 ORC5 origin recognition complex, subunit 5 2081 262 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A303.[MT7]-LLLEQILNK[MT7].2y6_1.heavy 686.444 / 888.527 32766.0 41.101898193359375 45 15 10 10 10 11.62955698834575 8.598779824563596 0.0 3 0.9510719299681096 5.556437830004014 32766.0 155.94956962025316 0.0 - - - - - - - 283.53846153846155 65 13 ORC5 origin recognition complex, subunit 5 2083 262 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A303.[MT7]-LLLEQILNK[MT7].2b5_1.heavy 686.444 / 741.463 25397.0 41.101898193359375 45 15 10 10 10 11.62955698834575 8.598779824563596 0.0 3 0.9510719299681096 5.556437830004014 25397.0 39.872439883036435 0.0 - - - - - - - 608.5 50 8 ORC5 origin recognition complex, subunit 5 2085 263 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A449.[MT7]-VLVIGAGGLGC[CAM]ELLK[MT7].3y6_1.heavy 596.362 / 863.478 108889.0 38.78260040283203 46 16 10 10 10 1.9262076160318267 35.149617325662916 0.0 3 0.9630498802384431 6.400413356789253 108889.0 172.43626852827538 0.0 - - - - - - - 259.0 217 2 UBA3 ubiquitin-like modifier activating enzyme 3 2087 263 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A449.[MT7]-VLVIGAGGLGC[CAM]ELLK[MT7].3b4_1.heavy 596.362 / 569.414 93013.0 38.78260040283203 46 16 10 10 10 1.9262076160318267 35.149617325662916 0.0 3 0.9630498802384431 6.400413356789253 93013.0 148.39988024282562 0.0 - - - - - - - 345.0 186 2 UBA3 ubiquitin-like modifier activating enzyme 3 2089 263 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A449.[MT7]-VLVIGAGGLGC[CAM]ELLK[MT7].3b5_1.heavy 596.362 / 626.436 104057.0 38.78260040283203 46 16 10 10 10 1.9262076160318267 35.149617325662916 0.0 3 0.9630498802384431 6.400413356789253 104057.0 212.66356144578828 0.0 - - - - - - - 276.2 208 5 UBA3 ubiquitin-like modifier activating enzyme 3 2091 263 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A449.[MT7]-VLVIGAGGLGC[CAM]ELLK[MT7].3b8_1.heavy 596.362 / 811.516 157207.0 38.78260040283203 46 16 10 10 10 1.9262076160318267 35.149617325662916 0.0 3 0.9630498802384431 6.400413356789253 157207.0 327.78890046509093 0.0 - - - - - - - 241.8 314 5 UBA3 ubiquitin-like modifier activating enzyme 3 2093 264 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9492.[MT7]-QQTIILDDELIQWK[MT7].3y3_1.heavy 677.717 / 605.353 45590.0 39.13159942626953 44 18 8 10 8 5.145312875147482 19.43516408555304 0.0 4 0.9804871259867978 8.820496156633704 45590.0 89.01680516576867 1.0 - - - - - - - 675.3333333333334 98 9 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 2095 264 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9492.[MT7]-QQTIILDDELIQWK[MT7].3b4_1.heavy 677.717 / 615.358 73620.0 39.13159942626953 44 18 8 10 8 5.145312875147482 19.43516408555304 0.0 4 0.9804871259867978 8.820496156633704 73620.0 75.84298401420958 0.0 - - - - - - - 281.6666666666667 147 3 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 2097 264 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9492.[MT7]-QQTIILDDELIQWK[MT7].3b5_1.heavy 677.717 / 728.442 88141.0 39.13159942626953 44 18 8 10 8 5.145312875147482 19.43516408555304 0.0 4 0.9804871259867978 8.820496156633704 88141.0 93.29506291635825 1.0 - - - - - - - 709.0 221 5 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 2099 264 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9492.[MT7]-QQTIILDDELIQWK[MT7].3b3_1.heavy 677.717 / 502.274 28198.0 39.13159942626953 44 18 8 10 8 5.145312875147482 19.43516408555304 0.0 4 0.9804871259867978 8.820496156633704 28198.0 66.00902107339354 0.0 - - - - - - - 253.5 56 10 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 2101 265 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A309.[MT7]-LAYVTYQDIR.2y8_1.heavy 693.381 / 1057.53 22975.0 31.337200164794922 47 17 10 10 10 5.049043351282399 19.805732104597826 0.0 3 0.9779660526287517 8.298804614069091 22975.0 85.0925925925926 0.0 - - - - - - - 333.0 45 4 E2F2;E2F3 E2F transcription factor 2;E2F transcription factor 3 2103 265 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A309.[MT7]-LAYVTYQDIR.2y9_1.heavy 693.381 / 1128.57 32298.0 31.337200164794922 47 17 10 10 10 5.049043351282399 19.805732104597826 0.0 3 0.9779660526287517 8.298804614069091 32298.0 56.73972972972973 0.0 - - - - - - - 333.0 64 5 E2F2;E2F3 E2F transcription factor 2;E2F transcription factor 3 2105 265 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A309.[MT7]-LAYVTYQDIR.2y6_1.heavy 693.381 / 795.399 21310.0 31.337200164794922 47 17 10 10 10 5.049043351282399 19.805732104597826 0.0 3 0.9779660526287517 8.298804614069091 21310.0 36.79654654654655 0.0 - - - - - - - 765.9 42 10 E2F2;E2F3 E2F transcription factor 2;E2F transcription factor 3 2107 265 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A309.[MT7]-LAYVTYQDIR.2y7_1.heavy 693.381 / 894.468 19978.0 31.337200164794922 47 17 10 10 10 5.049043351282399 19.805732104597826 0.0 3 0.9779660526287517 8.298804614069091 19978.0 73.99259259259259 0.0 - - - - - - - 333.0 39 3 E2F2;E2F3 E2F transcription factor 2;E2F transcription factor 3 2109 266 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A447.[MT7]-NIISLLNVFTPQK[MT7].3y3_1.heavy 592.36 / 516.326 216146.0 46.66389846801758 47 17 10 10 10 11.96134032451331 8.360267101092523 0.0 3 0.9739332785929371 7.6273071811025295 216146.0 699.1668524179843 0.0 - - - - - - - 473.0 432 1 MAPK9;MAPK10 mitogen-activated protein kinase 9;mitogen-activated protein kinase 10 2111 266 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A447.[MT7]-NIISLLNVFTPQK[MT7].3b4_1.heavy 592.36 / 572.352 41891.0 46.66389846801758 47 17 10 10 10 11.96134032451331 8.360267101092523 0.0 3 0.9739332785929371 7.6273071811025295 41891.0 83.16181022880215 0.0 - - - - - - - 378.2 83 5 MAPK9;MAPK10 mitogen-activated protein kinase 9;mitogen-activated protein kinase 10 2113 266 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A447.[MT7]-NIISLLNVFTPQK[MT7].3b5_1.heavy 592.36 / 685.437 60337.0 46.66389846801758 47 17 10 10 10 11.96134032451331 8.360267101092523 0.0 3 0.9739332785929371 7.6273071811025295 60337.0 234.85954418593784 0.0 - - - - - - - 243.2 120 5 MAPK9;MAPK10 mitogen-activated protein kinase 9;mitogen-activated protein kinase 10 2115 266 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A447.[MT7]-NIISLLNVFTPQK[MT7].3b7_1.heavy 592.36 / 912.563 52499.0 46.66389846801758 47 17 10 10 10 11.96134032451331 8.360267101092523 0.0 3 0.9739332785929371 7.6273071811025295 52499.0 304.97975647890337 0.0 - - - - - - - 324.4 104 5 MAPK9;MAPK10 mitogen-activated protein kinase 9;mitogen-activated protein kinase 10 2117 267 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A308.[MT7]-DAIAILDGIPSR.2y5_1.heavy 692.899 / 529.309 40568.0 36.63679885864258 47 17 10 10 10 4.1237616309674925 24.24970426249846 0.0 3 0.9748080222434212 7.759170037569535 40568.0 78.2291608198442 0.0 - - - - - - - 268.5 81 4 ANAPC7 anaphase promoting complex subunit 7 2119 267 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A308.[MT7]-DAIAILDGIPSR.2b4_1.heavy 692.899 / 515.295 34773.0 36.63679885864258 47 17 10 10 10 4.1237616309674925 24.24970426249846 0.0 3 0.9748080222434212 7.759170037569535 34773.0 14.754318624884409 0.0 - - - - - - - 268.5 69 4 ANAPC7 anaphase promoting complex subunit 7 2121 267 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A308.[MT7]-DAIAILDGIPSR.2y9_1.heavy 692.899 / 941.542 38422.0 36.63679885864258 47 17 10 10 10 4.1237616309674925 24.24970426249846 0.0 3 0.9748080222434212 7.759170037569535 38422.0 109.28983781435956 0.0 - - - - - - - 429.0 76 2 ANAPC7 anaphase promoting complex subunit 7 2123 267 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A308.[MT7]-DAIAILDGIPSR.2y11_1.heavy 692.899 / 1125.66 9874.0 36.63679885864258 47 17 10 10 10 4.1237616309674925 24.24970426249846 0.0 3 0.9748080222434212 7.759170037569535 9874.0 5.0557481591454 0.0 - - - - - - - 262.55555555555554 19 9 ANAPC7 anaphase promoting complex subunit 7 2125 268 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A307.[MT7]-AFLLQTVDGK[MT7].2y8_1.heavy 690.41 / 1017.61 10323.0 33.710601806640625 46 16 10 10 10 1.9270485350604452 36.71147390129963 0.0 3 0.9695266670419751 7.0516916057267895 10323.0 26.097691099476442 0.0 - - - - - - - 287.0 20 2 CDC25B cell division cycle 25 homolog B (S. pombe) 2127 268 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A307.[MT7]-AFLLQTVDGK[MT7].2y5_1.heavy 690.41 / 663.379 21793.0 33.710601806640625 46 16 10 10 10 1.9270485350604452 36.71147390129963 0.0 3 0.9695266670419751 7.0516916057267895 21793.0 37.07761948569718 1.0 - - - - - - - 696.0 44 7 CDC25B cell division cycle 25 homolog B (S. pombe) 2129 268 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A307.[MT7]-AFLLQTVDGK[MT7].2y6_1.heavy 690.41 / 791.438 26094.0 33.710601806640625 46 16 10 10 10 1.9270485350604452 36.71147390129963 0.0 3 0.9695266670419751 7.0516916057267895 26094.0 64.19170611246274 0.0 - - - - - - - 644.75 52 8 CDC25B cell division cycle 25 homolog B (S. pombe) 2131 268 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A307.[MT7]-AFLLQTVDGK[MT7].2y7_1.heavy 690.41 / 904.522 31829.0 33.710601806640625 46 16 10 10 10 1.9270485350604452 36.71147390129963 0.0 3 0.9695266670419751 7.0516916057267895 31829.0 75.63358949082492 0.0 - - - - - - - 655.0 63 7 CDC25B cell division cycle 25 homolog B (S. pombe) 2133 269 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A445.[MT7]-NIISLLNVFTPQK[MT7].2y4_1.heavy 888.037 / 617.374 4616.0 46.66389846801758 48 18 10 10 10 25.900610980050022 3.8609127822129423 0.0 3 0.9865275785753037 10.620641466723761 4616.0 17.875231735345746 0.0 - - - - - - - 291.0 9 14 MAPK9;MAPK10 mitogen-activated protein kinase 9;mitogen-activated protein kinase 10 2135 269 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A445.[MT7]-NIISLLNVFTPQK[MT7].2b4_1.heavy 888.037 / 572.352 4345.0 46.66389846801758 48 18 10 10 10 25.900610980050022 3.8609127822129423 0.0 3 0.9865275785753037 10.620641466723761 4345.0 6.498215503458393 1.0 - - - - - - - 302.9230769230769 8 13 MAPK9;MAPK10 mitogen-activated protein kinase 9;mitogen-activated protein kinase 10 2137 269 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A445.[MT7]-NIISLLNVFTPQK[MT7].2y3_1.heavy 888.037 / 516.326 15207.0 46.66389846801758 48 18 10 10 10 25.900610980050022 3.8609127822129423 0.0 3 0.9865275785753037 10.620641466723761 15207.0 17.049750849377123 1.0 - - - - - - - 271.4 30 10 MAPK9;MAPK10 mitogen-activated protein kinase 9;mitogen-activated protein kinase 10 2139 269 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A445.[MT7]-NIISLLNVFTPQK[MT7].2y7_1.heavy 888.037 / 977.554 4277.0 46.66389846801758 48 18 10 10 10 25.900610980050022 3.8609127822129423 0.0 3 0.9865275785753037 10.620641466723761 4277.0 11.607197640117993 1.0 - - - - - - - 232.78571428571428 8 14 MAPK9;MAPK10 mitogen-activated protein kinase 9;mitogen-activated protein kinase 10 2141 270 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A306.[MT7]-SYVLPEVIC[CAM]R.2b4_1.heavy 690.377 / 607.357 27106.0 32.80540084838867 45 15 10 10 10 2.5877032836414635 30.302268636585374 0.0 3 0.9566034236073925 5.90270954917495 27106.0 64.07075041050902 0.0 - - - - - - - 305.0 54 4 POLE polymerase (DNA directed), epsilon 2143 270 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A306.[MT7]-SYVLPEVIC[CAM]R.2y9_1.heavy 690.377 / 1148.61 5787.0 32.80540084838867 45 15 10 10 10 2.5877032836414635 30.302268636585374 0.0 3 0.9566034236073925 5.90270954917495 5787.0 17.64532620286313 1.0 - - - - - - - 305.0 12 2 POLE polymerase (DNA directed), epsilon 2145 270 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A306.[MT7]-SYVLPEVIC[CAM]R.2y6_1.heavy 690.377 / 773.397 44161.0 32.80540084838867 45 15 10 10 10 2.5877032836414635 30.302268636585374 0.0 3 0.9566034236073925 5.90270954917495 44161.0 46.72690653876335 0.0 - - - - - - - 305.0 88 1 POLE polymerase (DNA directed), epsilon 2147 270 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A306.[MT7]-SYVLPEVIC[CAM]R.2y7_1.heavy 690.377 / 886.482 21014.0 32.80540084838867 45 15 10 10 10 2.5877032836414635 30.302268636585374 0.0 3 0.9566034236073925 5.90270954917495 21014.0 38.51921099625242 0.0 - - - - - - - 685.25 42 8 POLE polymerase (DNA directed), epsilon 2149 271 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A443.[MT7]-LSVEIWDWDLTSR.2y8_1.heavy 882.458 / 1078.5 19551.0 43.20819854736328 46 16 10 10 10 1.8330852537441 36.93247013783716 0.0 3 0.9625444216021631 6.356808778676147 19551.0 110.35824405148108 0.0 - - - - - - - 193.125 39 16 PRKCB protein kinase C, beta 2151 271 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A443.[MT7]-LSVEIWDWDLTSR.2y9_1.heavy 882.458 / 1191.58 13686.0 43.20819854736328 46 16 10 10 10 1.8330852537441 36.93247013783716 0.0 3 0.9625444216021631 6.356808778676147 13686.0 115.16684770072766 0.0 - - - - - - - 223.16666666666666 27 12 PRKCB protein kinase C, beta 2153 271 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A443.[MT7]-LSVEIWDWDLTSR.2b4_1.heavy 882.458 / 573.336 32723.0 43.20819854736328 46 16 10 10 10 1.8330852537441 36.93247013783716 0.0 3 0.9625444216021631 6.356808778676147 32723.0 177.94078712483605 0.0 - - - - - - - 661.4285714285714 65 7 PRKCB protein kinase C, beta 2155 271 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A443.[MT7]-LSVEIWDWDLTSR.2y6_1.heavy 882.458 / 777.389 18111.0 43.20819854736328 46 16 10 10 10 1.8330852537441 36.93247013783716 0.0 3 0.9625444216021631 6.356808778676147 18111.0 52.44451309770049 0.0 - - - - - - - 632.0 36 7 PRKCB protein kinase C, beta 2157 272 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9090.[MT7]-AC[CAM]QEQIEAALR.3y6_1.heavy 478.249 / 672.404 2663.0 27.498600006103516 29 18 0 5 6 7.627411019008233 13.110608534244516 0.0449981689453125 5 0.9880518110656495 11.279191216703062 2663.0 5.198048048048048 2.0 - - - - - - - 333.0 5 5 CCND3 cyclin D3 2159 272 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9090.[MT7]-AC[CAM]QEQIEAALR.3b4_1.heavy 478.249 / 633.278 2663.0 27.498600006103516 29 18 0 5 6 7.627411019008233 13.110608534244516 0.0449981689453125 5 0.9880518110656495 11.279191216703062 2663.0 8.237307357432545 2.0 - - - - - - - 333.0 11 3 CCND3 cyclin D3 2161 272 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9090.[MT7]-AC[CAM]QEQIEAALR.3b5_1.heavy 478.249 / 761.337 999.0 27.498600006103516 29 18 0 5 6 7.627411019008233 13.110608534244516 0.0449981689453125 5 0.9880518110656495 11.279191216703062 999.0 1.3 2.0 - - - - - - - 0.0 1 0 CCND3 cyclin D3 2163 272 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9090.[MT7]-AC[CAM]QEQIEAALR.3y5_1.heavy 478.249 / 559.32 5327.0 27.498600006103516 29 18 0 5 6 7.627411019008233 13.110608534244516 0.0449981689453125 5 0.9880518110656495 11.279191216703062 5327.0 15.943673673673672 1.0 - - - - - - - 333.0 54 4 CCND3 cyclin D3 2165 273 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A441.[MT7]-SLLGMLSDLQVYK[MT7].3y3_1.heavy 585.67 / 553.347 41962.0 45.570098876953125 42 12 10 10 10 0.8139833269763617 70.55852745482298 0.0 3 0.890904776790546 3.7019434724861138 41962.0 76.64056770486741 0.0 - - - - - - - 273.3333333333333 83 12 CUL4A cullin 4A 2167 273 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A441.[MT7]-SLLGMLSDLQVYK[MT7].3b4_1.heavy 585.67 / 515.331 28989.0 45.570098876953125 42 12 10 10 10 0.8139833269763617 70.55852745482298 0.0 3 0.890904776790546 3.7019434724861138 28989.0 134.6344627339572 0.0 - - - - - - - 270.7692307692308 57 13 CUL4A cullin 4A 2169 273 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A441.[MT7]-SLLGMLSDLQVYK[MT7].3b5_1.heavy 585.67 / 646.371 35395.0 45.570098876953125 42 12 10 10 10 0.8139833269763617 70.55852745482298 0.0 3 0.890904776790546 3.7019434724861138 35395.0 176.93970321713493 0.0 - - - - - - - 240.0 70 13 CUL4A cullin 4A 2171 273 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A441.[MT7]-SLLGMLSDLQVYK[MT7].3b8_1.heavy 585.67 / 961.515 24424.0 45.570098876953125 42 12 10 10 10 0.8139833269763617 70.55852745482298 0.0 3 0.890904776790546 3.7019434724861138 24424.0 336.1598595006935 0.0 - - - - - - - 174.54545454545453 48 11 CUL4A cullin 4A 2173 274 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9083.[MT7]-ALDLVK[MT7].2y4_1.heavy 473.812 / 618.394 17667.0 27.589149475097656 34 17 4 5 8 5.010033771058667 19.95994529571186 0.045299530029296875 4 0.9730823089167681 7.505237505722357 17667.0 28.748310312210734 0.0 - - - - - - - 333.0 35 5 CHEK2 CHK2 checkpoint homolog (S. pombe) 2175 274 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9083.[MT7]-ALDLVK[MT7].2y5_1.heavy 473.812 / 731.478 20000.0 27.589149475097656 34 17 4 5 8 5.010033771058667 19.95994529571186 0.045299530029296875 4 0.9730823089167681 7.505237505722357 20000.0 38.2 1.0 - - - - - - - 333.0 122 2 CHEK2 CHK2 checkpoint homolog (S. pombe) 2177 274 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9083.[MT7]-ALDLVK[MT7].2b4_1.heavy 473.812 / 557.341 16333.0 27.589149475097656 34 17 4 5 8 5.010033771058667 19.95994529571186 0.045299530029296875 4 0.9730823089167681 7.505237505722357 16333.0 20.174318203300825 0.0 - - - - - - - 333.0 32 4 CHEK2 CHK2 checkpoint homolog (S. pombe) 2179 274 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9083.[MT7]-ALDLVK[MT7].2y3_1.heavy 473.812 / 503.367 36667.0 27.589149475097656 34 17 4 5 8 5.010033771058667 19.95994529571186 0.045299530029296875 4 0.9730823089167681 7.505237505722357 36667.0 127.15974743685922 0.0 - - - - - - - 333.0 73 6 CHEK2 CHK2 checkpoint homolog (S. pombe) 2181 275 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9285.[MT7]-NELLGAGIEK[MT7].2y4_1.heavy 666.392 / 590.363 22000.0 28.467599868774414 47 17 10 10 10 3.089129043100223 25.814259436929138 0.0 3 0.9710376173225894 7.234215335590139 22000.0 22.77290920030345 0.0 - - - - - - - 333.0 44 1 FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 2183 275 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9285.[MT7]-NELLGAGIEK[MT7].2b3_1.heavy 666.392 / 501.279 59000.0 28.467599868774414 47 17 10 10 10 3.089129043100223 25.814259436929138 0.0 3 0.9710376173225894 7.234215335590139 59000.0 122.09882680565192 0.0 - - - - - - - 333.0 118 4 FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 2185 275 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9285.[MT7]-NELLGAGIEK[MT7].2y6_1.heavy 666.392 / 718.422 40333.0 28.467599868774414 47 17 10 10 10 3.089129043100223 25.814259436929138 0.0 3 0.9710376173225894 7.234215335590139 40333.0 58.281185 0.0 - - - - - - - 333.0 80 3 FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 2187 275 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9285.[MT7]-NELLGAGIEK[MT7].2y7_1.heavy 666.392 / 831.506 35667.0 28.467599868774414 47 17 10 10 10 3.089129043100223 25.814259436929138 0.0 3 0.9710376173225894 7.234215335590139 35667.0 50.035476369092265 0.0 - - - - - - - 333.0 71 7 FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 2189 276 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A450.[MT7]-EVSEEHNLLPQPPR.3y7_1.heavy 596.984 / 820.504 9949.0 26.24185037612915 41 16 10 5 10 4.299240353995536 23.25992309480072 0.04500007629394531 3 0.9698426096194035 7.088722466478461 9949.0 1.4856676557863502 1.0 - - - - - - - 321.0 19 1 POLD2 polymerase (DNA directed), delta 2, regulatory subunit 50kDa 2191 276 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A450.[MT7]-EVSEEHNLLPQPPR.3b5_1.heavy 596.984 / 718.338 20219.0 26.24185037612915 41 16 10 5 10 4.299240353995536 23.25992309480072 0.04500007629394531 3 0.9698426096194035 7.088722466478461 20219.0 1.7132343567791442 1.0 - - - - - - - 963.0 40 2 POLD2 polymerase (DNA directed), delta 2, regulatory subunit 50kDa 2193 276 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A450.[MT7]-EVSEEHNLLPQPPR.3y8_1.heavy 596.984 / 934.547 8023.0 26.24185037612915 41 16 10 5 10 4.299240353995536 23.25992309480072 0.04500007629394531 3 0.9698426096194035 7.088722466478461 8023.0 1.8748977604673807 0.0 - - - - - - - 321.0 16 3 POLD2 polymerase (DNA directed), delta 2, regulatory subunit 50kDa 2195 276 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A450.[MT7]-EVSEEHNLLPQPPR.3y5_1.heavy 596.984 / 594.336 57447.0 26.24185037612915 41 16 10 5 10 4.299240353995536 23.25992309480072 0.04500007629394531 3 0.9698426096194035 7.088722466478461 57447.0 0.4223890983477915 2.0 - - - - - - - 1605.0 130 1 POLD2 polymerase (DNA directed), delta 2, regulatory subunit 50kDa 2197 277 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9080.[MT7]-AGANITPR.2y6_1.heavy 472.276 / 671.383 2125.0 17.90405035018921 37 16 10 5 6 1.1117246834513366 54.79317690548291 0.04659843444824219 5 0.9649270475452996 6.570503218386772 2125.0 3.3508474576271183 3.0 - - - - - - - 247.5 9 6 PLK1 polo-like kinase 1 2199 277 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9080.[MT7]-AGANITPR.2b5_1.heavy 472.276 / 571.332 6162.0 17.90405035018921 37 16 10 5 6 1.1117246834513366 54.79317690548291 0.04659843444824219 5 0.9649270475452996 6.570503218386772 6162.0 9.424009437725827 0.0 - - - - - - - 297.2 12 10 PLK1 polo-like kinase 1 2201 277 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9080.[MT7]-AGANITPR.2y5_1.heavy 472.276 / 600.346 1912.0 17.90405035018921 37 16 10 5 6 1.1117246834513366 54.79317690548291 0.04659843444824219 5 0.9649270475452996 6.570503218386772 1912.0 0.16007532956685494 7.0 - - - - - - - 303.2857142857143 6 7 PLK1 polo-like kinase 1 2203 277 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9080.[MT7]-AGANITPR.2y7_1.heavy 472.276 / 728.405 15298.0 17.90405035018921 37 16 10 5 6 1.1117246834513366 54.79317690548291 0.04659843444824219 5 0.9649270475452996 6.570503218386772 15298.0 81.88300296699 0.0 - - - - - - - 212.0 30 5 PLK1 polo-like kinase 1 2205 278 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9282.[MT7]-DLLQAAQTC[CAM]R.2y8_1.heavy 660.347 / 947.473 21567.0 26.830300331115723 41 16 10 5 10 2.7602552087809693 36.22853411593187 0.04400062561035156 3 0.9649753028940617 6.575054707495033 21567.0 25.90680183626626 0.0 - - - - - - - 327.0 43 6 FBXW7 F-box and WD repeat domain containing 7 2207 278 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9282.[MT7]-DLLQAAQTC[CAM]R.2y9_1.heavy 660.347 / 1060.56 17973.0 26.830300331115723 41 16 10 5 10 2.7602552087809693 36.22853411593187 0.04400062561035156 3 0.9649753028940617 6.575054707495033 17973.0 64.18006408681553 0.0 - - - - - - - 327.0 35 5 FBXW7 F-box and WD repeat domain containing 7 2209 278 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9282.[MT7]-DLLQAAQTC[CAM]R.2y6_1.heavy 660.347 / 706.33 45749.0 26.830300331115723 41 16 10 5 10 2.7602552087809693 36.22853411593187 0.04400062561035156 3 0.9649753028940617 6.575054707495033 45749.0 88.69704081632653 0.0 - - - - - - - 735.5 91 8 FBXW7 F-box and WD repeat domain containing 7 2211 278 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9282.[MT7]-DLLQAAQTC[CAM]R.2y7_1.heavy 660.347 / 834.389 54899.0 26.830300331115723 41 16 10 5 10 2.7602552087809693 36.22853411593187 0.04400062561035156 3 0.9649753028940617 6.575054707495033 54899.0 107.55722448979591 0.0 - - - - - - - 327.0 109 3 FBXW7 F-box and WD repeat domain containing 7 2213 279 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A451.[MT7]-VGALAWNAEQLSSGSR.3b6_1.heavy 597.315 / 742.437 6328.0 32.99777412414551 43 20 10 3 10 5.521774593053483 18.11011991068999 0.05049896240234375 3 0.9940158722944852 15.945756665384984 6328.0 7.875714846621712 0.0 - - - - - - - 301.0 12 2 FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 2215 279 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A451.[MT7]-VGALAWNAEQLSSGSR.3y6_1.heavy 597.315 / 606.321 7835.0 32.99777412414551 43 20 10 3 10 5.521774593053483 18.11011991068999 0.05049896240234375 3 0.9940158722944852 15.945756665384984 7835.0 30.014433084408903 0.0 - - - - - - - 669.8888888888889 15 9 FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 2217 279 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A451.[MT7]-VGALAWNAEQLSSGSR.3b5_1.heavy 597.315 / 556.357 21696.0 32.99777412414551 43 20 10 3 10 5.521774593053483 18.11011991068999 0.05049896240234375 3 0.9940158722944852 15.945756665384984 21696.0 44.16 0.0 - - - - - - - 301.0 43 4 FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 2219 279 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A451.[MT7]-VGALAWNAEQLSSGSR.3y8_1.heavy 597.315 / 863.422 4821.0 32.99777412414551 43 20 10 3 10 5.521774593053483 18.11011991068999 0.05049896240234375 3 0.9940158722944852 15.945756665384984 4821.0 30.111229235880398 0.0 - - - - - - - 301.0 9 4 FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 2221 280 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9087.[MT7]-AAESTSSR.2y5_1.heavy 476.744 / 537.263 11604.0 12.173999786376953 50 20 10 10 10 9.561957749274429 10.458109376982774 0.0 3 0.9948654646875249 17.215744040075997 11604.0 59.688980022262584 0.0 - - - - - - - 118.61363636363636 23 44 CDC45 cell division cycle 45 homolog (S. cerevisiae) 2223 280 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9087.[MT7]-AAESTSSR.2b4_1.heavy 476.744 / 503.258 3040.0 12.173999786376953 50 20 10 10 10 9.561957749274429 10.458109376982774 0.0 3 0.9948654646875249 17.215744040075997 3040.0 7.702823839589259 0.0 - - - - - - - 137.42222222222222 6 45 CDC45 cell division cycle 45 homolog (S. cerevisiae) 2225 280 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9087.[MT7]-AAESTSSR.2y6_1.heavy 476.744 / 666.305 6891.0 12.173999786376953 50 20 10 10 10 9.561957749274429 10.458109376982774 0.0 3 0.9948654646875249 17.215744040075997 6891.0 4.533552631578946 0.0 - - - - - - - 141.55172413793105 13 29 CDC45 cell division cycle 45 homolog (S. cerevisiae) 2227 280 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9087.[MT7]-AAESTSSR.2y7_1.heavy 476.744 / 737.342 26399.0 12.173999786376953 50 20 10 10 10 9.561957749274429 10.458109376982774 0.0 3 0.9948654646875249 17.215744040075997 26399.0 167.79105929284518 0.0 - - - - - - - 731.1428571428571 52 7 CDC45 cell division cycle 45 homolog (S. cerevisiae) 2229 281 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9084.[MT7]-AEVQSNR.2y4_1.heavy 474.255 / 504.253 4844.0 13.443499565124512 50 20 10 10 10 16.043490141050754 6.2330577150496875 0.0 3 0.9954486375536616 18.28634048646383 4844.0 16.32076583712334 1.0 - - - - - - - 214.27777777777777 11 18 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 2231 281 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9084.[MT7]-AEVQSNR.2y5_1.heavy 474.255 / 603.321 12753.0 13.443499565124512 50 20 10 10 10 16.043490141050754 6.2330577150496875 0.0 3 0.9954486375536616 18.28634048646383 12753.0 48.99784688995216 0.0 - - - - - - - 184.95652173913044 25 23 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 2233 281 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9084.[MT7]-AEVQSNR.2b4_1.heavy 474.255 / 572.316 5141.0 13.443499565124512 50 20 10 10 10 16.043490141050754 6.2330577150496875 0.0 3 0.9954486375536616 18.28634048646383 5141.0 14.393438154993138 1.0 - - - - - - - 234.91666666666666 10 24 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 2235 281 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9084.[MT7]-AEVQSNR.2y6_1.heavy 474.255 / 732.364 17498.0 13.443499565124512 50 20 10 10 10 16.043490141050754 6.2330577150496875 0.0 3 0.9954486375536616 18.28634048646383 17498.0 57.73631578947368 0.0 - - - - - - - 283.1363636363636 34 22 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 2237 282 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9085.[MT7]-TINPSK[MT7].2y4_1.heavy 474.292 / 589.343 26479.0 17.24822473526001 23 8 6 5 4 0.5600343635584237 93.86479495016891 0.04910087585449219 10 0.775157660634081 2.552278891107524 26479.0 36.189798908309086 0.0 - - - - - - - 271.6666666666667 52 6 PIK3CB phosphoinositide-3-kinase, catalytic, beta polypeptide 2239 282 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9085.[MT7]-TINPSK[MT7].2y5_1.heavy 474.292 / 702.427 15276.0 17.24822473526001 23 8 6 5 4 0.5600343635584237 93.86479495016891 0.04910087585449219 10 0.775157660634081 2.552278891107524 15276.0 36.00235679214403 0.0 - - - - - - - 407.0 30 4 PIK3CB phosphoinositide-3-kinase, catalytic, beta polypeptide 2241 282 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9085.[MT7]-TINPSK[MT7].2b4_1.heavy 474.292 / 570.337 1018.0 17.24822473526001 23 8 6 5 4 0.5600343635584237 93.86479495016891 0.04910087585449219 10 0.775157660634081 2.552278891107524 1018.0 2.1580362076106754 13.0 - - - - - - - 262.0 9 7 PIK3CB phosphoinositide-3-kinase, catalytic, beta polypeptide 2243 282 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9085.[MT7]-TINPSK[MT7].2y1_1.heavy 474.292 / 291.215 8351.0 17.24822473526001 23 8 6 5 4 0.5600343635584237 93.86479495016891 0.04910087585449219 10 0.775157660634081 2.552278891107524 8351.0 0.13710133196222415 19.0 - - - - - - - 2291.5 85 8 PIK3CB phosphoinositide-3-kinase, catalytic, beta polypeptide 2245 283 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9088.[MT7]-ELIYK[MT7].2b3_1.heavy 477.299 / 500.32 117168.0 25.4596004486084 50 20 10 10 10 14.521818468421506 6.8861899229394385 0.0 3 0.9987924326942126 35.51100664897628 117168.0 81.66663594470046 0.0 - - - - - - - 310.0 234 4 C2orf89;MAPK8;MAPK9;MAPK10 chromosome 2 open reading frame 89;mitogen-activated protein kinase 8;mitogen-activated protein kinase 9;mitogen-activated protein kinase 10 2247 283 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9088.[MT7]-ELIYK[MT7].2y4_1.heavy 477.299 / 680.446 205820.0 25.4596004486084 50 20 10 10 10 14.521818468421506 6.8861899229394385 0.0 3 0.9987924326942126 35.51100664897628 205820.0 688.2355225806451 0.0 - - - - - - - 310.0 411 2 C2orf89;MAPK8;MAPK9;MAPK10 chromosome 2 open reading frame 89;mitogen-activated protein kinase 8;mitogen-activated protein kinase 9;mitogen-activated protein kinase 10 2249 283 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9088.[MT7]-ELIYK[MT7].2b4_1.heavy 477.299 / 663.383 24178.0 25.4596004486084 50 20 10 10 10 14.521818468421506 6.8861899229394385 0.0 3 0.9987924326942126 35.51100664897628 24178.0 92.5523440860215 0.0 - - - - - - - 310.0 48 2 C2orf89;MAPK8;MAPK9;MAPK10 chromosome 2 open reading frame 89;mitogen-activated protein kinase 8;mitogen-activated protein kinase 9;mitogen-activated protein kinase 10 2251 283 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9088.[MT7]-ELIYK[MT7].2y3_1.heavy 477.299 / 567.362 165524.0 25.4596004486084 50 20 10 10 10 14.521818468421506 6.8861899229394385 0.0 3 0.9987924326942126 35.51100664897628 165524.0 216.81540566959922 0.0 - - - - - - - 723.3333333333334 331 3 C2orf89;MAPK8;MAPK9;MAPK10 chromosome 2 open reading frame 89;mitogen-activated protein kinase 8;mitogen-activated protein kinase 9;mitogen-activated protein kinase 10 2253 284 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9288.[MT7]-LAQQIANC[CAM]K[MT7].2y4_1.heavy 667.379 / 636.326 22288.0 24.07110023498535 47 20 9 10 8 6.844652684938346 14.609945106498966 0.0 4 0.9921562522841886 13.92567571516402 22288.0 24.962353254350415 0.0 - - - - - - - 286.0 44 5 MID1 midline 1 (Opitz/BBB syndrome) 2255 284 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9288.[MT7]-LAQQIANC[CAM]K[MT7].2y8_1.heavy 667.379 / 1076.56 17144.0 24.07110023498535 47 20 9 10 8 6.844652684938346 14.609945106498966 0.0 4 0.9921562522841886 13.92567571516402 17144.0 59.24067166686321 0.0 - - - - - - - 286.0 34 6 MID1 midline 1 (Opitz/BBB syndrome) 2257 284 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9288.[MT7]-LAQQIANC[CAM]K[MT7].2y5_1.heavy 667.379 / 749.41 15430.0 24.07110023498535 47 20 9 10 8 6.844652684938346 14.609945106498966 0.0 4 0.9921562522841886 13.92567571516402 15430.0 27.543990767198444 1.0 - - - - - - - 286.0 52 5 MID1 midline 1 (Opitz/BBB syndrome) 2259 284 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9288.[MT7]-LAQQIANC[CAM]K[MT7].2b4_1.heavy 667.379 / 585.348 15144.0 24.07110023498535 47 20 9 10 8 6.844652684938346 14.609945106498966 0.0 4 0.9921562522841886 13.92567571516402 15144.0 46.413309982486865 1.0 - - - - - - - 698.1111111111111 30 9 MID1 midline 1 (Opitz/BBB syndrome) 2261 285 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9286.[MT7]-RQQEIDQK[MT7].3b6_2.heavy 444.921 / 457.744 49472.0 15.184499740600586 42 12 10 10 10 1.1699942310955205 68.1341638709423 0.0 3 0.897363640059876 3.818785582602012 49472.0 58.62046742778833 1.0 - - - - - - - 294.75 105 8 SMC1B structural maintenance of chromosomes 1B 2263 285 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9286.[MT7]-RQQEIDQK[MT7].3y3_1.heavy 444.921 / 534.3 53848.0 15.184499740600586 42 12 10 10 10 1.1699942310955205 68.1341638709423 0.0 3 0.897363640059876 3.818785582602012 53848.0 5.134125804853887 1.0 - - - - - - - 625.0 107 7 SMC1B structural maintenance of chromosomes 1B 2265 285 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9286.[MT7]-RQQEIDQK[MT7].3b4_1.heavy 444.921 / 686.37 23053.0 15.184499740600586 42 12 10 10 10 1.1699942310955205 68.1341638709423 0.0 3 0.897363640059876 3.818785582602012 23053.0 89.52063828210729 0.0 - - - - - - - 721.0 46 7 SMC1B structural maintenance of chromosomes 1B 2267 285 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9286.[MT7]-RQQEIDQK[MT7].3b3_1.heavy 444.921 / 557.328 7067.0 15.184499740600586 42 12 10 10 10 1.1699942310955205 68.1341638709423 0.0 3 0.897363640059876 3.818785582602012 7067.0 16.631465370080406 0.0 - - - - - - - 610.0 14 8 SMC1B structural maintenance of chromosomes 1B 2269 286 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9287.[MT7]-YNFIPEVWAEVSEK[MT7].3y3_1.heavy 667.019 / 507.289 51344.0 42.9598503112793 38 12 10 6 10 0.8482596962556316 71.81824223656115 0.03209686279296875 3 0.8852134358389376 3.6072170908861416 51344.0 95.77523743234474 0.0 - - - - - - - 133.75 102 4 CHEK2 CHK2 checkpoint homolog (S. pombe) 2271 286 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9287.[MT7]-YNFIPEVWAEVSEK[MT7].3b4_1.heavy 667.019 / 682.368 54774.0 42.9598503112793 38 12 10 6 10 0.8482596962556316 71.81824223656115 0.03209686279296875 3 0.8852134358389376 3.6072170908861416 54774.0 87.2792094379501 0.0 - - - - - - - 696.625 109 8 CHEK2 CHK2 checkpoint homolog (S. pombe) 2273 286 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9287.[MT7]-YNFIPEVWAEVSEK[MT7].3y4_1.heavy 667.019 / 606.358 20044.0 42.9598503112793 38 12 10 6 10 0.8482596962556316 71.81824223656115 0.03209686279296875 3 0.8852134358389376 3.6072170908861416 20044.0 34.27855229380879 0.0 - - - - - - - 643.1428571428571 40 7 CHEK2 CHK2 checkpoint homolog (S. pombe) 2275 286 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9287.[MT7]-YNFIPEVWAEVSEK[MT7].3b3_1.heavy 667.019 / 569.284 33765.0 42.9598503112793 38 12 10 6 10 0.8482596962556316 71.81824223656115 0.03209686279296875 3 0.8852134358389376 3.6072170908861416 33765.0 69.32617559191017 0.0 - - - - - - - 707.4 67 10 CHEK2 CHK2 checkpoint homolog (S. pombe) 2277 287 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A312.[MT7]-RIEELLAEK[MT7].2b8_1.heavy 694.921 / 1098.63 5667.0 29.315399169921875 48 18 10 10 10 6.148284167437746 16.264700406922522 0.0 3 0.9867878535725608 10.724976633440152 5667.0 23.13276794035415 0.0 - - - - - - - 333.0 11 3 UBA3 ubiquitin-like modifier activating enzyme 3 2279 287 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A312.[MT7]-RIEELLAEK[MT7].2y4_1.heavy 694.921 / 604.379 1667.0 29.315399169921875 48 18 10 10 10 6.148284167437746 16.264700406922522 0.0 3 0.9867878535725608 10.724976633440152 1667.0 1.2919093738282714 19.0 - - - - - - - 1047.5714285714287 5 7 UBA3 ubiquitin-like modifier activating enzyme 3 2281 287 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A312.[MT7]-RIEELLAEK[MT7].2y8_1.heavy 694.921 / 1088.63 2000.0 29.315399169921875 48 18 10 10 10 6.148284167437746 16.264700406922522 0.0 3 0.9867878535725608 10.724976633440152 2000.0 2.768515742128935 1.0 - - - - - - - 333.0 4 3 UBA3 ubiquitin-like modifier activating enzyme 3 2283 287 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A312.[MT7]-RIEELLAEK[MT7].2b4_1.heavy 694.921 / 672.38 N/A 29.315399169921875 48 18 10 10 10 6.148284167437746 16.264700406922522 0.0 3 0.9867878535725608 10.724976633440152 4667.0 6.017757078269503 2.0 - - - - - - - 667.0 9 7 UBA3 ubiquitin-like modifier activating enzyme 3 2285 288 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A311.[MT7]-NIISPPWDFR.2y8_1.heavy 694.876 / 1017.52 10238.0 38.268025398254395 44 18 10 6 10 4.9498876871783395 20.202478585328173 0.039501190185546875 3 0.9877903576854936 11.15752901620766 10238.0 18.996895505927764 0.0 - - - - - - - 248.0 20 3 CDC16 cell division cycle 16 homolog (S. cerevisiae) 2287 288 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A311.[MT7]-NIISPPWDFR.2y9_1.heavy 694.876 / 1130.6 5212.0 38.268025398254395 44 18 10 6 10 4.9498876871783395 20.202478585328173 0.039501190185546875 3 0.9877903576854936 11.15752901620766 5212.0 15.908185010431712 1.0 - - - - - - - 292.2857142857143 11 7 CDC16 cell division cycle 16 homolog (S. cerevisiae) 2289 288 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A311.[MT7]-NIISPPWDFR.2y6_1.heavy 694.876 / 817.399 18801.0 38.268025398254395 44 18 10 6 10 4.9498876871783395 20.202478585328173 0.039501190185546875 3 0.9877903576854936 11.15752901620766 18801.0 17.48182760783765 0.0 - - - - - - - 372.0 37 1 CDC16 cell division cycle 16 homolog (S. cerevisiae) 2291 288 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A311.[MT7]-NIISPPWDFR.2y7_1.heavy 694.876 / 904.431 14520.0 38.268025398254395 44 18 10 6 10 4.9498876871783395 20.202478585328173 0.039501190185546875 3 0.9877903576854936 11.15752901620766 14520.0 1.2357837593304681 1.0 - - - - - - - 310.0 35 3 CDC16 cell division cycle 16 homolog (S. cerevisiae) 2293 289 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A313.[MT7]-FFPLIEVNK[MT7].2y4_1.heavy 697.918 / 633.369 24271.0 39.30039978027344 45 15 10 10 10 3.5681526087850934 28.025707127489877 0.0 3 0.9528909834198352 5.663572957030891 24271.0 53.814565120624486 0.0 - - - - - - - 285.25 48 8 RPA1 replication protein A1, 70kDa 2295 289 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A313.[MT7]-FFPLIEVNK[MT7].2y5_1.heavy 697.918 / 746.453 10262.0 39.30039978027344 45 15 10 10 10 3.5681526087850934 28.025707127489877 0.0 3 0.9528909834198352 5.663572957030891 10262.0 8.817752631578946 1.0 - - - - - - - 326.0 23 8 RPA1 replication protein A1, 70kDa 2297 289 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A313.[MT7]-FFPLIEVNK[MT7].2y3_1.heavy 697.918 / 504.326 19058.0 39.30039978027344 45 15 10 10 10 3.5681526087850934 28.025707127489877 0.0 3 0.9528909834198352 5.663572957030891 19058.0 49.51498594461992 0.0 - - - - - - - 326.0 38 10 RPA1 replication protein A1, 70kDa 2299 289 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A313.[MT7]-FFPLIEVNK[MT7].2y7_1.heavy 697.918 / 956.59 69880.0 39.30039978027344 45 15 10 10 10 3.5681526087850934 28.025707127489877 0.0 3 0.9528909834198352 5.663572957030891 69880.0 134.75711691598107 0.0 - - - - - - - 427.875 139 8 RPA1 replication protein A1, 70kDa 2301 290 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A316.[MT7]-DLK[MT7]PENILVTSGGTVK[MT7].3y7_1.heavy 701.751 / 793.454 105000.0 29.116300582885742 41 11 10 10 10 1.554781158712818 64.31773336048697 0.0 3 0.8722997310755652 3.416116412936344 105000.0 169.23378935532233 0.0 - - - - - - - 333.0 210 1 CDK4 cyclin-dependent kinase 4 2303 290 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A316.[MT7]-DLK[MT7]PENILVTSGGTVK[MT7].3b6_1.heavy 701.751 / 985.556 27667.0 29.116300582885742 41 11 10 10 10 1.554781158712818 64.31773336048697 0.0 3 0.8722997310755652 3.416116412936344 27667.0 87.78248903903904 0.0 - - - - - - - 333.0 55 3 CDK4 cyclin-dependent kinase 4 2305 290 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A316.[MT7]-DLK[MT7]PENILVTSGGTVK[MT7].3b3_1.heavy 701.751 / 645.417 30333.0 29.116300582885742 41 11 10 10 10 1.554781158712818 64.31773336048697 0.0 3 0.8722997310755652 3.416116412936344 30333.0 50.709573244873624 0.0 - - - - - - - 333.0 60 4 CDK4 cyclin-dependent kinase 4 2307 290 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A316.[MT7]-DLK[MT7]PENILVTSGGTVK[MT7].3b7_2.heavy 701.751 / 549.823 174333.0 29.116300582885742 41 11 10 10 10 1.554781158712818 64.31773336048697 0.0 3 0.8722997310755652 3.416116412936344 174333.0 272.06627928621083 0.0 - - - - - - - 333.0 348 1 CDK4 cyclin-dependent kinase 4 2309 291 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9482.[MT7]-MQTVTAAVEELLVAAQR.3b6_1.heavy 658.699 / 776.409 82002.0 48.23080062866211 45 15 10 10 10 2.4408712960380643 33.33407984964774 0.0 3 0.9559300322190618 5.857105041872846 82002.0 309.06271034482756 0.0 - - - - - - - 219.23076923076923 164 13 GADD45B growth arrest and DNA-damage-inducible, beta 2311 291 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9482.[MT7]-MQTVTAAVEELLVAAQR.3b4_1.heavy 658.699 / 604.325 61852.0 48.23080062866211 45 15 10 10 10 2.4408712960380643 33.33407984964774 0.0 3 0.9559300322190618 5.857105041872846 61852.0 125.19932307692308 0.0 - - - - - - - 756.25 123 8 GADD45B growth arrest and DNA-damage-inducible, beta 2313 291 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9482.[MT7]-MQTVTAAVEELLVAAQR.3y5_1.heavy 658.699 / 544.32 252157.0 48.23080062866211 45 15 10 10 10 2.4408712960380643 33.33407984964774 0.0 3 0.9559300322190618 5.857105041872846 252157.0 738.9164080482897 0.0 - - - - - - - 272.22222222222223 504 9 GADD45B growth arrest and DNA-damage-inducible, beta 2315 291 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9482.[MT7]-MQTVTAAVEELLVAAQR.3b7_1.heavy 658.699 / 847.446 180905.0 48.23080062866211 45 15 10 10 10 2.4408712960380643 33.33407984964774 0.0 3 0.9559300322190618 5.857105041872846 180905.0 483.27478571428566 0.0 - - - - - - - 216.66666666666666 361 9 GADD45B growth arrest and DNA-damage-inducible, beta 2317 292 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A453.[MT7]-LYEAVPQLSNVFK[MT7].3b4_1.heavy 599.345 / 621.336 40711.0 38.268025398254395 40 14 10 6 10 3.59364254387786 27.82691900460726 0.039501190185546875 3 0.9343380630449467 4.789608369779347 40711.0 81.78260614819153 0.0 - - - - - - - 340.7142857142857 81 7 CDC7 cell division cycle 7 homolog (S. cerevisiae) 2319 292 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A453.[MT7]-LYEAVPQLSNVFK[MT7].3b5_1.heavy 599.345 / 720.405 33743.0 38.268025398254395 40 14 10 6 10 3.59364254387786 27.82691900460726 0.039501190185546875 3 0.9343380630449467 4.789608369779347 33743.0 31.851900855084132 0.0 - - - - - - - 305.6666666666667 67 6 CDC7 cell division cycle 7 homolog (S. cerevisiae) 2321 292 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A453.[MT7]-LYEAVPQLSNVFK[MT7].3b3_1.heavy 599.345 / 550.299 9536.0 38.268025398254395 40 14 10 6 10 3.59364254387786 27.82691900460726 0.039501190185546875 3 0.9343380630449467 4.789608369779347 9536.0 6.481183800623053 1.0 - - - - - - - 756.625 19 8 CDC7 cell division cycle 7 homolog (S. cerevisiae) 2323 292 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A453.[MT7]-LYEAVPQLSNVFK[MT7].3y5_1.heavy 599.345 / 738.427 12837.0 38.268025398254395 40 14 10 6 10 3.59364254387786 27.82691900460726 0.039501190185546875 3 0.9343380630449467 4.789608369779347 12837.0 26.918799999999997 0.0 - - - - - - - 261.85714285714283 25 7 CDC7 cell division cycle 7 homolog (S. cerevisiae) 2325 293 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A455.[MT7]-EDALAFNSAISLPGPR.2y12_1.heavy 901.482 / 1229.66 2869.0 35.53005027770996 34 12 9 5 8 11.86913870625744 8.425211169474306 0.041896820068359375 4 0.8918347314814697 3.718123354770463 2869.0 6.362217573221757 0.0 - - - - - - - 347.6363636363636 5 11 CCNA2 cyclin A2 2327 293 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A455.[MT7]-EDALAFNSAISLPGPR.2b4_1.heavy 901.482 / 573.3 6456.0 35.53005027770996 34 12 9 5 8 11.86913870625744 8.425211169474306 0.041896820068359375 4 0.8918347314814697 3.718123354770463 6456.0 3.972378138449292 1.0 - - - - - - - 418.25 12 8 CCNA2 cyclin A2 2329 293 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A455.[MT7]-EDALAFNSAISLPGPR.2b5_1.heavy 901.482 / 644.337 4304.0 35.53005027770996 34 12 9 5 8 11.86913870625744 8.425211169474306 0.041896820068359375 4 0.8918347314814697 3.718123354770463 4304.0 4.758125003124328 1.0 - - - - - - - 318.6666666666667 8 9 CCNA2 cyclin A2 2331 293 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A455.[MT7]-EDALAFNSAISLPGPR.2y11_1.heavy 901.482 / 1158.63 4543.0 35.53005027770996 34 12 9 5 8 11.86913870625744 8.425211169474306 0.041896820068359375 4 0.8918347314814697 3.718123354770463 4543.0 9.53451851237253 1.0 - - - - - - - 418.25 14 4 CCNA2 cyclin A2 2333 294 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A454.[MT7]-AILVDWLVQVHSK[MT7].3b6_1.heavy 599.361 / 842.489 39252.0 41.065399169921875 47 17 10 10 10 3.9857451888468396 25.08941120466663 0.0 3 0.9764158514815034 8.020381300026084 39252.0 83.178001135747 0.0 - - - - - - - 253.14285714285714 78 7 CCNB2 cyclin B2 2335 294 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A454.[MT7]-AILVDWLVQVHSK[MT7].3y3_1.heavy 599.361 / 515.306 67056.0 41.065399169921875 47 17 10 10 10 3.9857451888468396 25.08941120466663 0.0 3 0.9764158514815034 8.020381300026084 67056.0 77.934215354901 0.0 - - - - - - - 272.6 134 5 CCNB2 cyclin B2 2337 294 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A454.[MT7]-AILVDWLVQVHSK[MT7].3b5_1.heavy 599.361 / 656.41 73325.0 41.065399169921875 47 17 10 10 10 3.9857451888468396 25.08941120466663 0.0 3 0.9764158514815034 8.020381300026084 73325.0 113.74527345452395 0.0 - - - - - - - 163.4 146 5 CCNB2 cyclin B2 2339 294 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A454.[MT7]-AILVDWLVQVHSK[MT7].3b7_1.heavy 599.361 / 955.573 16764.0 41.065399169921875 47 17 10 10 10 3.9857451888468396 25.08941120466663 0.0 3 0.9764158514815034 8.020381300026084 16764.0 35.48922636896249 0.0 - - - - - - - 217.93333333333334 33 15 CCNB2 cyclin B2 2341 295 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A478.[MT7]-IFDLIGLPPEDDWPR.3y7_1.heavy 643.008 / 914.4 34845.0 45.32162570953369 41 15 10 6 10 3.0800633586551927 32.466864591922445 0.033901214599609375 3 0.9550490185481962 5.7989902017462365 34845.0 18.145808238036388 1.0 - - - - - - - 1483.0 69 1 CDK4 cyclin-dependent kinase 4 2343 295 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A478.[MT7]-IFDLIGLPPEDDWPR.3b4_1.heavy 643.008 / 633.373 50662.0 45.32162570953369 41 15 10 6 10 3.0800633586551927 32.466864591922445 0.033901214599609375 3 0.9550490185481962 5.7989902017462365 50662.0 39.44818662400485 0.0 - - - - - - - 1236.0 101 1 CDK4 cyclin-dependent kinase 4 2345 295 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A478.[MT7]-IFDLIGLPPEDDWPR.3b3_1.heavy 643.008 / 520.289 57746.0 45.32162570953369 41 15 10 6 10 3.0800633586551927 32.466864591922445 0.033901214599609375 3 0.9550490185481962 5.7989902017462365 57746.0 29.051452759857852 0.0 - - - - - - - 3542.0 115 1 CDK4 cyclin-dependent kinase 4 2347 295 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A478.[MT7]-IFDLIGLPPEDDWPR.3y8_1.heavy 643.008 / 1011.45 33527.0 45.32162570953369 41 15 10 6 10 3.0800633586551927 32.466864591922445 0.033901214599609375 3 0.9550490185481962 5.7989902017462365 33527.0 40.43960493416678 1.0 - - - - - - - 1071.0 67 1 CDK4 cyclin-dependent kinase 4 2349 296 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A474.[MT7]-QDIITLQDPTNLDK[MT7].3y3_1.heavy 634.686 / 519.326 18333.0 31.183700561523438 50 20 10 10 10 5.996864263762672 16.67538159972559 0.0 3 0.9907999946572372 12.856856827148471 18333.0 17.504427675116496 0.0 - - - - - - - 333.0 36 1 PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2 2351 296 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A474.[MT7]-QDIITLQDPTNLDK[MT7].3b4_1.heavy 634.686 / 614.363 35667.0 31.183700561523438 50 20 10 10 10 5.996864263762672 16.67538159972559 0.0 3 0.9907999946572372 12.856856827148471 35667.0 19.133774119235095 0.0 - - - - - - - 333.0 71 1 PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2 2353 296 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A474.[MT7]-QDIITLQDPTNLDK[MT7].3b5_1.heavy 634.686 / 715.411 20667.0 31.183700561523438 50 20 10 10 10 5.996864263762672 16.67538159972559 0.0 3 0.9907999946572372 12.856856827148471 20667.0 14.281819625666056 1.0 - - - - - - - 333.0 44 2 PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2 2355 296 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A474.[MT7]-QDIITLQDPTNLDK[MT7].3b3_1.heavy 634.686 / 501.279 39000.0 31.183700561523438 50 20 10 10 10 5.996864263762672 16.67538159972559 0.0 3 0.9907999946572372 12.856856827148471 39000.0 43.729069941871366 0.0 - - - - - - - 333.0 78 2 PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2 2357 297 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A475.[MT7]-IYDITNVLEGIQLIR.3y7_1.heavy 635.371 / 828.494 235333.0 47.42070007324219 42 12 10 10 10 1.137118096634973 59.39349693734806 0.0 3 0.8967480758588345 3.807182202640765 235333.0 136.3514249093986 0.0 - - - - - - - 244.0 470 3 E2F2 E2F transcription factor 2 2359 297 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A475.[MT7]-IYDITNVLEGIQLIR.3b6_1.heavy 635.371 / 864.458 129272.0 47.42070007324219 42 12 10 10 10 1.137118096634973 59.39349693734806 0.0 3 0.8967480758588345 3.807182202640765 129272.0 79.8185851222567 0.0 - - - - - - - 193.16666666666666 258 6 E2F2 E2F transcription factor 2 2361 297 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A475.[MT7]-IYDITNVLEGIQLIR.3y6_1.heavy 635.371 / 699.451 215656.0 47.42070007324219 42 12 10 10 10 1.137118096634973 59.39349693734806 0.0 3 0.8967480758588345 3.807182202640765 215656.0 96.75936709876858 0.0 - - - - - - - 259.0 431 4 E2F2 E2F transcription factor 2 2363 297 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A475.[MT7]-IYDITNVLEGIQLIR.3b3_1.heavy 635.371 / 536.284 143040.0 47.42070007324219 42 12 10 10 10 1.137118096634973 59.39349693734806 0.0 3 0.8967480758588345 3.807182202640765 143040.0 97.49885202975248 0.0 - - - - - - - 198.0 286 4 E2F2 E2F transcription factor 2 2365 298 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A375.[MT7]-LWDIEC[CAM]GAC[CAM]LR.2b3_1.heavy 768.875 / 559.3 23555.0 35.59339904785156 45 15 10 10 10 2.9279212572515747 34.153923966476306 0.0 3 0.959368787715627 6.101700813303927 23555.0 22.211185241426104 0.0 - - - - - - - 373.8888888888889 47 9 FBXW11;BTRC F-box and WD repeat domain containing 11;beta-transducin repeat containing 2367 298 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A375.[MT7]-LWDIEC[CAM]GAC[CAM]LR.2y8_1.heavy 768.875 / 978.45 15142.0 35.59339904785156 45 15 10 10 10 2.9279212572515747 34.153923966476306 0.0 3 0.959368787715627 6.101700813303927 15142.0 37.991989296455316 0.0 - - - - - - - 330.375 30 8 FBXW11;BTRC F-box and WD repeat domain containing 11;beta-transducin repeat containing 2369 298 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A375.[MT7]-LWDIEC[CAM]GAC[CAM]LR.2y9_1.heavy 768.875 / 1093.48 7691.0 35.59339904785156 45 15 10 10 10 2.9279212572515747 34.153923966476306 0.0 3 0.959368787715627 6.101700813303927 7691.0 25.627777392510403 0.0 - - - - - - - 349.54545454545456 15 11 FBXW11;BTRC F-box and WD repeat domain containing 11;beta-transducin repeat containing 2371 298 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A375.[MT7]-LWDIEC[CAM]GAC[CAM]LR.2y6_1.heavy 768.875 / 736.323 8653.0 35.59339904785156 45 15 10 10 10 2.9279212572515747 34.153923966476306 0.0 3 0.959368787715627 6.101700813303927 8653.0 9.406507073696169 1.0 - - - - - - - 412.14285714285717 17 7 FBXW11;BTRC F-box and WD repeat domain containing 11;beta-transducin repeat containing 2373 299 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A379.[MT7]-RLAYVTYQDIR.2y8_1.heavy 771.431 / 1057.53 N/A N/A - - - - - - - - - 0.0 - - - - - - - E2F2 E2F transcription factor 2 2375 299 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A379.[MT7]-RLAYVTYQDIR.2b4_1.heavy 771.431 / 648.395 N/A N/A - - - - - - - - - 0.0 - - - - - - - E2F2 E2F transcription factor 2 2377 299 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A379.[MT7]-RLAYVTYQDIR.2y9_1.heavy 771.431 / 1128.57 N/A N/A - - - - - - - - - 0.0 - - - - - - - E2F2 E2F transcription factor 2 2379 299 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A379.[MT7]-RLAYVTYQDIR.2y10_1.heavy 771.431 / 1241.65 N/A N/A - - - - - - - - - 0.0 - - - - - - - E2F2 E2F transcription factor 2 2381 300 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A7195.[MT7]-GLAQQQRPK[MT7].3y7_1.heavy 438.601 / 999.582 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNA2 cyclin A2 2383 300 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A7195.[MT7]-GLAQQQRPK[MT7].3y6_1.heavy 438.601 / 928.544 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNA2 cyclin A2 2385 300 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A7195.[MT7]-GLAQQQRPK[MT7].3y7_2.heavy 438.601 / 500.294 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNA2 cyclin A2 2387 300 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A7195.[MT7]-GLAQQQRPK[MT7].3y5_1.heavy 438.601 / 800.486 N/A N/A - - - - - - - - - 0.0 - - - - - - - CCNA2 cyclin A2 2389 301 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9040.[MT7]-QEAQTR.2b3_1.heavy 438.736 / 473.248 6603.0 11.833199977874756 31 15 2 8 6 5.974495247077477 16.737815642068952 0.011000633239746094 6 0.9528562502725256 5.661469579010785 6603.0 25.678333333333327 0.0 - - - - - - - 145.5737704918033 13 61 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 2391 301 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9040.[MT7]-QEAQTR.2y4_1.heavy 438.736 / 475.262 14496.0 11.833199977874756 31 15 2 8 6 5.974495247077477 16.737815642068952 0.011000633239746094 6 0.9528562502725256 5.661469579010785 14496.0 88.58666666666666 1.0 - - - - - - - 116.25 72 56 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 2393 301 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9040.[MT7]-QEAQTR.2y5_1.heavy 438.736 / 604.305 30432.0 11.833199977874756 31 15 2 8 6 5.974495247077477 16.737815642068952 0.011000633239746094 6 0.9528562502725256 5.661469579010785 30432.0 27.37269841269841 1.0 - - - - - - - 211.71428571428572 141 70 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 2395 301 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9040.[MT7]-QEAQTR.2b4_1.heavy 438.736 / 601.306 8973.0 11.833199977874756 31 15 2 8 6 5.974495247077477 16.737815642068952 0.011000633239746094 6 0.9528562502725256 5.661469579010785 8973.0 9.445263157894736 1.0 - - - - - - - 144.26470588235293 34 68 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 2397 302 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9043.[MT7]-FIAIK[MT7].2y4_1.heavy 440.299 / 588.42 58667.0 29.612499237060547 41 11 10 10 10 0.6962912474127753 80.0063643626123 0.0 3 0.8795043389015784 3.518974463225754 58667.0 83.89381 0.0 - - - - - - - 333.0 117 1 C1orf101;CCNB2 chromosome 1 open reading frame 101;cyclin B2 2399 302 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9043.[MT7]-FIAIK[MT7].2y3_1.heavy 440.299 / 475.336 64000.0 29.612499237060547 41 11 10 10 10 0.6962912474127753 80.0063643626123 0.0 3 0.8795043389015784 3.518974463225754 64000.0 80.06743137494033 0.0 - - - - - - - 333.0 128 2 C1orf101;CCNB2 chromosome 1 open reading frame 101;cyclin B2 2401 302 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9043.[MT7]-FIAIK[MT7].2y2_1.heavy 440.299 / 404.299 36667.0 29.612499237060547 41 11 10 10 10 0.6962912474127753 80.0063643626123 0.0 3 0.8795043389015784 3.518974463225754 36667.0 48.61198642948993 0.0 - - - - - - - 333.0 73 3 C1orf101;CCNB2 chromosome 1 open reading frame 101;cyclin B2 2403 302 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9043.[MT7]-FIAIK[MT7].2y1_1.heavy 440.299 / 291.215 53667.0 29.612499237060547 41 11 10 10 10 0.6962912474127753 80.0063643626123 0.0 3 0.8795043389015784 3.518974463225754 53667.0 40.566199572885424 0.0 - - - - - - - 667.0 107 1 C1orf101;CCNB2 chromosome 1 open reading frame 101;cyclin B2 2405 303 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9042.[MT7]-ELDSK[MT7].2b3_1.heavy 440.255 / 502.263 21986.0 17.016599655151367 50 20 10 10 10 6.0837653183859075 16.437188939189905 0.0 3 0.9908580485696935 12.897677124143701 21986.0 34.0551425030979 0.0 - - - - - - - 352.75 43 4 CENPF;HMX3;RAD21;STAT1;LPGAT1 centromere protein F, 350/400kDa (mitosin);H6 family homeobox 3;RAD21 homolog (S. pombe);signal transducer and activator of transcription 1, 91kDa;lysophosphatidylglycerol acyltransferase 1 2407 303 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9042.[MT7]-ELDSK[MT7].2y4_1.heavy 440.255 / 606.358 20171.0 17.016599655151367 50 20 10 10 10 6.0837653183859075 16.437188939189905 0.0 3 0.9908580485696935 12.897677124143701 20171.0 19.194953884911975 0.0 - - - - - - - 252.25 40 4 CENPF;HMX3;RAD21;STAT1;LPGAT1 centromere protein F, 350/400kDa (mitosin);H6 family homeobox 3;RAD21 homolog (S. pombe);signal transducer and activator of transcription 1, 91kDa;lysophosphatidylglycerol acyltransferase 1 2409 303 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9042.[MT7]-ELDSK[MT7].2y3_1.heavy 440.255 / 493.274 12304.0 17.016599655151367 50 20 10 10 10 6.0837653183859075 16.437188939189905 0.0 3 0.9908580485696935 12.897677124143701 12304.0 29.278297635331604 0.0 - - - - - - - 291.3333333333333 24 9 CENPF;HMX3;RAD21;STAT1;LPGAT1 centromere protein F, 350/400kDa (mitosin);H6 family homeobox 3;RAD21 homolog (S. pombe);signal transducer and activator of transcription 1, 91kDa;lysophosphatidylglycerol acyltransferase 1 2411 303 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9042.[MT7]-ELDSK[MT7].2y2_1.heavy 440.255 / 378.247 34290.0 17.016599655151367 50 20 10 10 10 6.0837653183859075 16.437188939189905 0.0 3 0.9908580485696935 12.897677124143701 34290.0 39.193203472209085 0.0 - - - - - - - 252.25 68 4 CENPF;HMX3;RAD21;STAT1;LPGAT1 centromere protein F, 350/400kDa (mitosin);H6 family homeobox 3;RAD21 homolog (S. pombe);signal transducer and activator of transcription 1, 91kDa;lysophosphatidylglycerol acyltransferase 1 2413 304 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9189.[MT7]-ILVENPSAR.2y8_1.heavy 571.836 / 885.479 62746.0 25.24169921875 50 20 10 10 10 6.463163481828056 15.472299328519501 0.0 3 0.9925791139210297 14.317445891172216 62746.0 28.660685190482177 1.0 - - - - - - - 309.0 132 3 CHEK1 CHK1 checkpoint homolog (S. pombe) 2415 304 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9189.[MT7]-ILVENPSAR.2y5_1.heavy 571.836 / 544.284 33382.0 25.24169921875 50 20 10 10 10 6.463163481828056 15.472299328519501 0.0 3 0.9925791139210297 14.317445891172216 33382.0 22.558648454349388 0.0 - - - - - - - 721.0 66 3 CHEK1 CHK1 checkpoint homolog (S. pombe) 2417 304 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9189.[MT7]-ILVENPSAR.2y6_1.heavy 571.836 / 673.326 32455.0 25.24169921875 50 20 10 10 10 6.463163481828056 15.472299328519501 0.0 3 0.9925791139210297 14.317445891172216 32455.0 42.44142606355604 1.0 - - - - - - - 309.0 64 2 CHEK1 CHK1 checkpoint homolog (S. pombe) 2419 304 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9189.[MT7]-ILVENPSAR.2y7_1.heavy 571.836 / 772.395 36164.0 25.24169921875 50 20 10 10 10 6.463163481828056 15.472299328519501 0.0 3 0.9925791139210297 14.317445891172216 36164.0 76.45326825949283 1.0 - - - - - - - 309.0 72 1 CHEK1 CHK1 checkpoint homolog (S. pombe) 2421 305 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A7192.[MT7]-K[MT7]PAESQK[MT7].3y6_1.heavy 407.251 / 803.438 8136.0 13.43019962310791 41 14 10 7 10 1.6542523149274195 47.9919195240532 0.026599884033203125 3 0.948407773051238 5.409848851155041 8136.0 20.9810888252149 0.0 - - - - - - - 203.25 16 12 CCNA2 cyclin A2 2423 305 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A7192.[MT7]-K[MT7]PAESQK[MT7].3y3_1.heavy 407.251 / 506.306 18481.0 13.43019962310791 41 14 10 7 10 1.6542523149274195 47.9919195240532 0.026599884033203125 3 0.948407773051238 5.409848851155041 18481.0 35.71595422622235 0.0 - - - - - - - 193.52380952380952 36 21 CCNA2 cyclin A2 2425 305 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A7192.[MT7]-K[MT7]PAESQK[MT7].3y4_1.heavy 407.251 / 635.348 11274.0 13.43019962310791 41 14 10 7 10 1.6542523149274195 47.9919195240532 0.026599884033203125 3 0.948407773051238 5.409848851155041 11274.0 113.65620047426144 0.0 - - - - - - - 209.13333333333333 22 15 CCNA2 cyclin A2 2427 305 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A7192.[MT7]-K[MT7]PAESQK[MT7].3y5_1.heavy 407.251 / 706.385 7322.0 13.43019962310791 41 14 10 7 10 1.6542523149274195 47.9919195240532 0.026599884033203125 3 0.948407773051238 5.409848851155041 7322.0 79.05459440766722 0.0 - - - - - - - 182.42857142857142 14 7 CCNA2 cyclin A2 2429 306 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A373.[MT7]-SGFNPNQGFFK[MT7].3b6_1.heavy 510.936 / 761.37 5667.0 31.183700561523438 42 12 10 10 10 1.8215720538387365 54.897636241872746 0.0 3 0.8948957889830911 3.7728797844634583 5667.0 28.42009009009009 0.0 - - - - - - - 333.0 11 5 UBE3C ubiquitin protein ligase E3C 2431 306 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A373.[MT7]-SGFNPNQGFFK[MT7].3y3_1.heavy 510.936 / 585.352 25000.0 31.183700561523438 42 12 10 10 10 1.8215720538387365 54.897636241872746 0.0 3 0.8948957889830911 3.7728797844634583 25000.0 103.55182768975874 0.0 - - - - - - - 333.0 50 4 UBE3C ubiquitin protein ligase E3C 2433 306 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A373.[MT7]-SGFNPNQGFFK[MT7].3y4_1.heavy 510.936 / 642.373 40333.0 31.183700561523438 42 12 10 10 10 1.8215720538387365 54.897636241872746 0.0 3 0.8948957889830911 3.7728797844634583 40333.0 149.86366010421523 0.0 - - - - - - - 333.0 80 2 UBE3C ubiquitin protein ligase E3C 2435 306 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A373.[MT7]-SGFNPNQGFFK[MT7].3y2_1.heavy 510.936 / 438.283 43000.0 31.183700561523438 42 12 10 10 10 1.8215720538387365 54.897636241872746 0.0 3 0.8948957889830911 3.7728797844634583 43000.0 42.86408602150538 0.0 - - - - - - - 333.0 86 2 UBE3C ubiquitin protein ligase E3C 2437 307 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A372.[MT7]-AFHLAC[CAM]LSPPLR.3y7_1.heavy 509.286 / 842.455 9963.0 32.60210037231445 48 18 10 10 10 4.113808128616644 24.308377268345556 0.0 3 0.9812526157091214 8.999351071083549 9963.0 38.37022526624909 0.0 - - - - - - - 311.0 19 3 AIRE autoimmune regulator 2439 307 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A372.[MT7]-AFHLAC[CAM]LSPPLR.3y6_1.heavy 509.286 / 682.425 9651.0 32.60210037231445 48 18 10 10 10 4.113808128616644 24.308377268345556 0.0 3 0.9812526157091214 8.999351071083549 9651.0 8.538594415812145 0.0 - - - - - - - 311.0 19 5 AIRE autoimmune regulator 2441 307 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A372.[MT7]-AFHLAC[CAM]LSPPLR.3b3_1.heavy 509.286 / 500.274 35492.0 32.60210037231445 48 18 10 10 10 4.113808128616644 24.308377268345556 0.0 3 0.9812526157091214 8.999351071083549 35492.0 20.15100256534388 0.0 - - - - - - - 311.0 70 1 AIRE autoimmune regulator 2443 307 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A372.[MT7]-AFHLAC[CAM]LSPPLR.3y8_1.heavy 509.286 / 913.492 3736.0 32.60210037231445 48 18 10 10 10 4.113808128616644 24.308377268345556 0.0 3 0.9812526157091214 8.999351071083549 3736.0 13.547607052064425 0.0 - - - - - - - 311.0 7 4 AIRE autoimmune regulator 2445 308 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A371.[MT7]-TRLNVQLEYSR.3y6_1.heavy 508.287 / 795.399 18359.0 25.593399047851562 45 15 10 10 10 2.4171034628775034 32.965863676114374 0.0 3 0.9524300445375279 5.635846666455551 18359.0 64.87254378032551 0.0 - - - - - - - 311.0 36 6 SMC1B structural maintenance of chromosomes 1B 2447 308 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A371.[MT7]-TRLNVQLEYSR.3b4_1.heavy 508.287 / 629.385 27072.0 25.593399047851562 45 15 10 10 10 2.4171034628775034 32.965863676114374 0.0 3 0.9524300445375279 5.635846666455551 27072.0 77.4678911215996 0.0 - - - - - - - 311.0 54 4 SMC1B structural maintenance of chromosomes 1B 2449 308 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A371.[MT7]-TRLNVQLEYSR.3y4_1.heavy 508.287 / 554.257 52278.0 25.593399047851562 45 15 10 10 10 2.4171034628775034 32.965863676114374 0.0 3 0.9524300445375279 5.635846666455551 52278.0 35.156286960828155 0.0 - - - - - - - 711.1428571428571 104 7 SMC1B structural maintenance of chromosomes 1B 2451 308 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A371.[MT7]-TRLNVQLEYSR.3y5_1.heavy 508.287 / 667.341 47610.0 25.593399047851562 45 15 10 10 10 2.4171034628775034 32.965863676114374 0.0 3 0.9524300445375279 5.635846666455551 47610.0 93.48276686774203 0.0 - - - - - - - 311.0 95 3 SMC1B structural maintenance of chromosomes 1B 2453 309 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9182.[MT7]-IYDALDNR.2b3_1.heavy 562.297 / 536.284 41848.0 27.341999053955078 44 14 10 10 10 1.363240660339103 48.67188520120318 0.0 3 0.9465009188058413 5.31170241807518 41848.0 14.201879338530578 0.0 - - - - - - - 774.6666666666666 83 3 CDC16 cell division cycle 16 homolog (S. cerevisiae) 2455 309 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9182.[MT7]-IYDALDNR.2y5_1.heavy 562.297 / 588.31 34874.0 27.341999053955078 44 14 10 10 10 1.363240660339103 48.67188520120318 0.0 3 0.9465009188058413 5.31170241807518 34874.0 21.628993541683446 1.0 - - - - - - - 332.0 69 2 CDC16 cell division cycle 16 homolog (S. cerevisiae) 2457 309 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9182.[MT7]-IYDALDNR.2b6_1.heavy 562.297 / 835.432 45170.0 27.341999053955078 44 14 10 10 10 1.363240660339103 48.67188520120318 0.0 3 0.9465009188058413 5.31170241807518 45170.0 151.00707495847325 0.0 - - - - - - - 332.0 90 6 CDC16 cell division cycle 16 homolog (S. cerevisiae) 2459 309 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9182.[MT7]-IYDALDNR.2y7_1.heavy 562.297 / 866.4 48491.0 27.341999053955078 44 14 10 10 10 1.363240660339103 48.67188520120318 0.0 3 0.9465009188058413 5.31170241807518 48491.0 75.41612108518359 0.0 - - - - - - - 332.0 96 5 CDC16 cell division cycle 16 homolog (S. cerevisiae) 2461 310 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9181.[MT7]-NAEEFTLR.2y4_1.heavy 562.297 / 536.319 N/A 27.208200454711914 47 18 9 10 10 8.738721210051173 11.44332192277529 0.0 2 0.9801214476809069 8.738722089122888 26031.0 3.524354924125506 1.0 - - - - - - - 330.0 85 1 UBE2L6 ubiquitin-conjugating enzyme E2L 6 2463 310 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9181.[MT7]-NAEEFTLR.2y5_1.heavy 562.297 / 665.362 30645.0 27.208200454711914 47 18 9 10 10 8.738721210051173 11.44332192277529 0.0 2 0.9801214476809069 8.738722089122888 30645.0 37.57383915022762 0.0 - - - - - - - 330.0 61 4 UBE2L6 ubiquitin-conjugating enzyme E2L 6 2465 310 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9181.[MT7]-NAEEFTLR.2b4_1.heavy 562.297 / 588.275 N/A 27.208200454711914 47 18 9 10 10 8.738721210051173 11.44332192277529 0.0 2 0.9801214476809069 8.738722089122888 28667.0 23.56693457821398 1.0 - - - - - - - 330.0 90 2 UBE2L6 ubiquitin-conjugating enzyme E2L 6 2467 310 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9181.[MT7]-NAEEFTLR.2y7_1.heavy 562.297 / 865.441 39212.0 27.208200454711914 47 18 9 10 10 8.738721210051173 11.44332192277529 0.0 2 0.9801214476809069 8.738722089122888 39212.0 134.29446660782583 0.0 - - - - - - - 330.0 78 8 UBE2L6 ubiquitin-conjugating enzyme E2L 6 2469 311 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9184.[MT7]-NNIQWVGR.2y4_1.heavy 565.813 / 517.288 18555.0 26.185100555419922 44 18 6 10 10 3.900099691830066 20.432451489369985 0.0 3 0.9884748168043678 11.48472119514243 18555.0 26.566028709803483 1.0 - - - - - - - 320.0 94 2 E2F2 E2F transcription factor 2 2471 311 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9184.[MT7]-NNIQWVGR.2y5_1.heavy 565.813 / 645.347 28792.0 26.185100555419922 44 18 6 10 10 3.900099691830066 20.432451489369985 0.0 3 0.9884748168043678 11.48472119514243 28792.0 92.55088097364894 0.0 - - - - - - - 320.0 57 3 E2F2 E2F transcription factor 2 2473 311 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9184.[MT7]-NNIQWVGR.2b4_1.heavy 565.813 / 614.338 20154.0 26.185100555419922 44 18 6 10 10 3.900099691830066 20.432451489369985 0.0 3 0.9884748168043678 11.48472119514243 20154.0 36.0935046875 0.0 - - - - - - - 320.0 40 7 E2F2 E2F transcription factor 2 2475 311 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9184.[MT7]-NNIQWVGR.2y7_1.heavy 565.813 / 872.474 27192.0 26.185100555419922 44 18 6 10 10 3.900099691830066 20.432451489369985 0.0 3 0.9884748168043678 11.48472119514243 27192.0 157.20374999999999 0.0 - - - - - - - 320.0 54 2 E2F2 E2F transcription factor 2 2477 312 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9183.[MT7]-K[MT7]LQPTVR.3y6_1.heavy 377.248 / 713.43 10880.0 17.986099243164062 40 14 10 10 6 3.9909957771826576 25.056403359713016 0.0 6 0.9472935617646459 5.351854790101999 10880.0 57.02582159624413 0.0 - - - - - - - 320.0 21 2 MAPK8;MAPK9;MAPK10 mitogen-activated protein kinase 8;mitogen-activated protein kinase 9;mitogen-activated protein kinase 10 2479 312 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9183.[MT7]-K[MT7]LQPTVR.3y4_1.heavy 377.248 / 472.288 126722.0 17.986099243164062 40 14 10 10 6 3.9909957771826576 25.056403359713016 0.0 6 0.9472935617646459 5.351854790101999 126722.0 343.48523554887686 0.0 - - - - - - - 373.5 253 4 MAPK8;MAPK9;MAPK10 mitogen-activated protein kinase 8;mitogen-activated protein kinase 9;mitogen-activated protein kinase 10 2481 312 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9183.[MT7]-K[MT7]LQPTVR.3y1_1.heavy 377.248 / 175.119 34987.0 17.986099243164062 40 14 10 10 6 3.9909957771826576 25.056403359713016 0.0 6 0.9472935617646459 5.351854790101999 34987.0 7.402985769267641 3.0 - - - - - - - 1067.0 121 2 MAPK8;MAPK9;MAPK10 mitogen-activated protein kinase 8;mitogen-activated protein kinase 9;mitogen-activated protein kinase 10 2483 312 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9183.[MT7]-K[MT7]LQPTVR.3y5_1.heavy 377.248 / 600.346 7467.0 17.986099243164062 40 14 10 10 6 3.9909957771826576 25.056403359713016 0.0 6 0.9472935617646459 5.351854790101999 7467.0 26.5888918691452 0.0 - - - - - - - 355.6666666666667 14 6 MAPK8;MAPK9;MAPK10 mitogen-activated protein kinase 8;mitogen-activated protein kinase 9;mitogen-activated protein kinase 10 2485 313 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9186.[MT7]-LLGHSPVLR.2y8_1.heavy 568.357 / 878.521 14837.0 26.477949142456055 40 15 10 5 10 2.5032135344486472 31.156729436082614 0.044300079345703125 3 0.9580778456307403 6.006362818085854 14837.0 23.36096000087102 0.0 - - - - - - - 323.0 29 6 CDC25B cell division cycle 25 homolog B (S. pombe) 2487 313 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9186.[MT7]-LLGHSPVLR.2y5_1.heavy 568.357 / 571.356 8064.0 26.477949142456055 40 15 10 5 10 2.5032135344486472 31.156729436082614 0.044300079345703125 3 0.9580778456307403 6.006362818085854 8064.0 10.68801568650067 0.0 - - - - - - - 323.0 16 4 CDC25B cell division cycle 25 homolog B (S. pombe) 2489 313 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9186.[MT7]-LLGHSPVLR.2y6_1.heavy 568.357 / 708.415 8064.0 26.477949142456055 40 15 10 5 10 2.5032135344486472 31.156729436082614 0.044300079345703125 3 0.9580778456307403 6.006362818085854 8064.0 14.626790813016333 0.0 - - - - - - - 323.0 16 3 CDC25B cell division cycle 25 homolog B (S. pombe) 2491 313 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9186.[MT7]-LLGHSPVLR.2y7_1.heavy 568.357 / 765.437 20966.0 26.477949142456055 40 15 10 5 10 2.5032135344486472 31.156729436082614 0.044300079345703125 3 0.9580778456307403 6.006362818085854 20966.0 53.18935447498238 0.0 - - - - - - - 323.0 41 6 CDC25B cell division cycle 25 homolog B (S. pombe) 2493 314 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A468.[MT7]-AGVPGVAAPGAPAAAPPAK[MT7].3b6_1.heavy 620.031 / 625.379 22436.0 24.255300521850586 45 15 10 10 10 1.6603235896578574 45.45402746964324 0.0 3 0.9516015391748602 5.587007356303364 22436.0 29.82933721434476 0.0 - - - - - - - 295.0 44 2 PLK1 polo-like kinase 1 2495 314 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A468.[MT7]-AGVPGVAAPGAPAAAPPAK[MT7].3b5_1.heavy 620.031 / 526.311 14466.0 24.255300521850586 45 15 10 10 10 1.6603235896578574 45.45402746964324 0.0 3 0.9516015391748602 5.587007356303364 14466.0 12.169768714621167 0.0 - - - - - - - 759.1428571428571 28 7 PLK1 polo-like kinase 1 2497 314 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A468.[MT7]-AGVPGVAAPGAPAAAPPAK[MT7].3y4_1.heavy 620.031 / 556.357 141703.0 24.255300521850586 45 15 10 10 10 1.6603235896578574 45.45402746964324 0.0 3 0.9516015391748602 5.587007356303364 141703.0 175.17898391193904 0.0 - - - - - - - 295.0 283 1 PLK1 polo-like kinase 1 2499 314 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A468.[MT7]-AGVPGVAAPGAPAAAPPAK[MT7].3b8_1.heavy 620.031 / 767.453 51367.0 24.255300521850586 45 15 10 10 10 1.6603235896578574 45.45402746964324 0.0 3 0.9516015391748602 5.587007356303364 51367.0 135.8689282626162 0.0 - - - - - - - 295.0 102 2 PLK1 polo-like kinase 1 2501 315 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A465.[MT7]-SGLAGC[CAM]VVGGLLYAVGGR.3y6_1.heavy 617.341 / 622.331 24663.0 43.789798736572266 47 17 10 10 10 2.2666102885938417 29.94420085678957 0.0 3 0.9757506001492203 7.9091594202005 24663.0 145.6276074178459 0.0 - - - - - - - 219.63636363636363 49 11 KEAP1 kelch-like ECH-associated protein 1 2503 315 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A465.[MT7]-SGLAGC[CAM]VVGGLLYAVGGR.3b6_1.heavy 617.341 / 690.336 16442.0 43.789798736572266 47 17 10 10 10 2.2666102885938417 29.94420085678957 0.0 3 0.9757506001492203 7.9091594202005 16442.0 42.57371625717648 0.0 - - - - - - - 704.4285714285714 32 7 KEAP1 kelch-like ECH-associated protein 1 2505 315 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A465.[MT7]-SGLAGC[CAM]VVGGLLYAVGGR.3b7_1.heavy 617.341 / 789.404 16152.0 43.789798736572266 47 17 10 10 10 2.2666102885938417 29.94420085678957 0.0 3 0.9757506001492203 7.9091594202005 16152.0 94.84127686200799 0.0 - - - - - - - 244.86666666666667 32 15 KEAP1 kelch-like ECH-associated protein 1 2507 315 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A465.[MT7]-SGLAGC[CAM]VVGGLLYAVGGR.3y10_1.heavy 617.341 / 962.542 19924.0 43.789798736572266 47 17 10 10 10 2.2666102885938417 29.94420085678957 0.0 3 0.9757506001492203 7.9091594202005 19924.0 98.03148973771941 0.0 - - - - - - - 186.93333333333334 39 15 KEAP1 kelch-like ECH-associated protein 1 2509 316 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A364.[MT7]-LISEEDLLRK[MT7].3b6_1.heavy 501.971 / 831.422 24000.0 30.554574966430664 28 5 10 3 10 1.4689859160481982 59.43362171424617 0.051300048828125 3 0.677133897835655 2.110598736226559 24000.0 83.10630630630631 0.0 - - - - - - - 333.0 48 2 MYC v-myc myelocytomatosis viral oncogene homolog (avian) 2511 316 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A364.[MT7]-LISEEDLLRK[MT7].3y8_1.heavy 501.971 / 1133.63 1000.0 30.554574966430664 28 5 10 3 10 1.4689859160481982 59.43362171424617 0.051300048828125 3 0.677133897835655 2.110598736226559 1000.0 3.003003003003003 0.0 - - - - - - - 333.0 2 1 MYC v-myc myelocytomatosis viral oncogene homolog (avian) 2513 316 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A364.[MT7]-LISEEDLLRK[MT7].3y8_2.heavy 501.971 / 567.318 51333.0 30.554574966430664 28 5 10 3 10 1.4689859160481982 59.43362171424617 0.051300048828125 3 0.677133897835655 2.110598736226559 51333.0 100.67350829084558 0.0 - - - - - - - 333.0 102 6 MYC v-myc myelocytomatosis viral oncogene homolog (avian) 2515 316 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A364.[MT7]-LISEEDLLRK[MT7].3y9_2.heavy 501.971 / 623.86 82333.0 30.554574966430664 28 5 10 3 10 1.4689859160481982 59.43362171424617 0.051300048828125 3 0.677133897835655 2.110598736226559 82333.0 262.0394919574644 0.0 - - - - - - - 333.0 164 4 MYC v-myc myelocytomatosis viral oncogene homolog (avian) 2517 317 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A368.[MT7]-EGAGAALVAEVIK[MT7].2b8_1.heavy 758.453 / 813.459 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDC14B CDC14 cell division cycle 14 homolog B (S. cerevisiae) 2519 317 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A368.[MT7]-EGAGAALVAEVIK[MT7].2b6_1.heavy 758.453 / 601.306 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDC14B CDC14 cell division cycle 14 homolog B (S. cerevisiae) 2521 317 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A368.[MT7]-EGAGAALVAEVIK[MT7].2b7_1.heavy 758.453 / 714.39 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDC14B CDC14 cell division cycle 14 homolog B (S. cerevisiae) 2523 317 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A368.[MT7]-EGAGAALVAEVIK[MT7].2b5_1.heavy 758.453 / 530.269 N/A N/A - - - - - - - - - 0.0 - - - - - - - CDC14B CDC14 cell division cycle 14 homolog B (S. cerevisiae) 2525 318 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A369.[MT7]-TALALEVGDIVK[MT7].3b6_1.heavy 506.311 / 743.442 122020.0 35.838600158691406 47 17 10 10 10 2.8199996182420395 29.202636655040394 0.0 3 0.9788717342158634 8.475450803313835 122020.0 558.2720330087622 0.0 - - - - - - - 352.0 244 4 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 2527 318 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A369.[MT7]-TALALEVGDIVK[MT7].3b4_1.heavy 506.311 / 501.315 217290.0 35.838600158691406 47 17 10 10 10 2.8199996182420395 29.202636655040394 0.0 3 0.9788717342158634 8.475450803313835 217290.0 479.59244876877113 0.0 - - - - - - - 391.0 434 3 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 2529 318 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A369.[MT7]-TALALEVGDIVK[MT7].3b5_1.heavy 506.311 / 614.399 91750.0 35.838600158691406 47 17 10 10 10 2.8199996182420395 29.202636655040394 0.0 3 0.9788717342158634 8.475450803313835 91750.0 429.5304866298643 0.0 - - - - - - - 313.0 183 3 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 2531 318 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A369.[MT7]-TALALEVGDIVK[MT7].3y5_1.heavy 506.311 / 675.416 128590.0 35.838600158691406 47 17 10 10 10 2.8199996182420395 29.202636655040394 0.0 3 0.9788717342158634 8.475450803313835 128590.0 529.2050897414699 0.0 - - - - - - - 301.85714285714283 257 7 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 2533 319 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9053.[MT7]-RVVSGSR.2y5_1.heavy 452.776 / 505.273 2418.0 13.26039981842041 37 13 10 10 4 1.324684133639806 47.63328441099656 0.0 7 0.9299285635533028 4.6347110949207595 2418.0 10.018477755940681 0.0 - - - - - - - 228.36363636363637 4 22 FBXW7 F-box and WD repeat domain containing 7 2535 319 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9053.[MT7]-RVVSGSR.2b4_1.heavy 452.776 / 586.379 1258.0 13.26039981842041 37 13 10 10 4 1.324684133639806 47.63328441099656 0.0 7 0.9299285635533028 4.6347110949207595 1258.0 2.607253886010363 7.0 - - - - - - - 190.13333333333333 11 30 FBXW7 F-box and WD repeat domain containing 7 2537 319 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9053.[MT7]-RVVSGSR.2b6_1.heavy 452.776 / 730.433 3095.0 13.26039981842041 37 13 10 10 4 1.324684133639806 47.63328441099656 0.0 7 0.9299285635533028 4.6347110949207595 3095.0 10.062167614974353 6.0 - - - - - - - 266.0 15 24 FBXW7 F-box and WD repeat domain containing 7 2539 319 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9053.[MT7]-RVVSGSR.2y6_1.heavy 452.776 / 604.341 10931.0 13.26039981842041 37 13 10 10 4 1.324684133639806 47.63328441099656 0.0 7 0.9299285635533028 4.6347110949207595 10931.0 19.356683951257452 0.0 - - - - - - - 286.67857142857144 21 28 FBXW7 F-box and WD repeat domain containing 7 2541 320 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9052.[MT7]-QVELIR.2y4_1.heavy 451.283 / 530.33 15595.0 25.4596004486084 48 18 10 10 10 3.1932831008637788 24.93939217913507 0.0 3 0.9875153703225874 11.03371255748356 15595.0 70.7273237179487 0.0 - - - - - - - 312.0 31 5 PIAS4 protein inhibitor of activated STAT, 4 2543 320 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9052.[MT7]-QVELIR.2b3_1.heavy 451.283 / 501.279 28382.0 25.4596004486084 48 18 10 10 10 3.1932831008637788 24.93939217913507 0.0 3 0.9875153703225874 11.03371255748356 28382.0 40.378347180761835 0.0 - - - - - - - 312.0 56 2 PIAS4 protein inhibitor of activated STAT, 4 2545 320 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9052.[MT7]-QVELIR.2y5_1.heavy 451.283 / 629.398 40234.0 25.4596004486084 48 18 10 10 10 3.1932831008637788 24.93939217913507 0.0 3 0.9875153703225874 11.03371255748356 40234.0 144.86878376433827 0.0 - - - - - - - 312.0 80 3 PIAS4 protein inhibitor of activated STAT, 4 2547 320 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9052.[MT7]-QVELIR.2b4_1.heavy 451.283 / 614.363 32749.0 25.4596004486084 48 18 10 10 10 3.1932831008637788 24.93939217913507 0.0 3 0.9875153703225874 11.03371255748356 32749.0 180.539358974359 0.0 - - - - - - - 312.0 65 6 PIAS4 protein inhibitor of activated STAT, 4 2549 321 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9199.[MT7]-ELEDLQK[MT7].2y5_1.heavy 581.831 / 776.427 55602.0 24.486799240112305 50 20 10 10 10 6.670654592683209 14.991032530703396 0.0 3 0.9956593116742117 18.7251734046271 55602.0 59.22093836841832 0.0 - - - - - - - 735.5 111 10 UBE2L6 ubiquitin-conjugating enzyme E2L 6 2551 321 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9199.[MT7]-ELEDLQK[MT7].2b4_1.heavy 581.831 / 631.305 143270.0 24.486799240112305 50 20 10 10 10 6.670654592683209 14.991032530703396 0.0 3 0.9956593116742117 18.7251734046271 143270.0 577.8888609257435 0.0 - - - - - - - 294.0 286 2 UBE2L6 ubiquitin-conjugating enzyme E2L 6 2553 321 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9199.[MT7]-ELEDLQK[MT7].2y3_1.heavy 581.831 / 532.357 128855.0 24.486799240112305 50 20 10 10 10 6.670654592683209 14.991032530703396 0.0 3 0.9956593116742117 18.7251734046271 128855.0 78.09821155159182 0.0 - - - - - - - 294.0 257 3 UBE2L6 ubiquitin-conjugating enzyme E2L 6 2555 321 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9199.[MT7]-ELEDLQK[MT7].2y6_1.heavy 581.831 / 889.511 80608.0 24.486799240112305 50 20 10 10 10 6.670654592683209 14.991032530703396 0.0 3 0.9956593116742117 18.7251734046271 80608.0 109.55430192313798 0.0 - - - - - - - 714.4285714285714 161 7 UBE2L6 ubiquitin-conjugating enzyme E2L 6 2557 322 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A7183.[MT7]-VAPLK[MT7].2b3_1.heavy 408.283 / 412.268 1808.0 21.213899612426758 48 20 10 10 8 10.369598762900152 9.643574673089104 0.0 4 0.9940174930033158 15.947918594058505 1808.0 3.1027612903225807 6.0 - - - - - - - 258.0 16 3 CHD4;CCNA2 chromodomain helicase DNA binding protein 4;cyclin A2 2559 322 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A7183.[MT7]-VAPLK[MT7].2y4_1.heavy 408.283 / 572.389 107703.0 21.213899612426758 48 20 10 10 8 10.369598762900152 9.643574673089104 0.0 4 0.9940174930033158 15.947918594058505 107703.0 53.17091141126026 1.0 - - - - - - - 258.0 215 1 CHD4;CCNA2 chromodomain helicase DNA binding protein 4;cyclin A2 2561 322 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A7183.[MT7]-VAPLK[MT7].2b4_1.heavy 408.283 / 525.352 5424.0 21.213899612426758 48 20 10 10 8 10.369598762900152 9.643574673089104 0.0 4 0.9940174930033158 15.947918594058505 5424.0 22.91225478716697 1.0 - - - - - - - 258.0 13 4 CHD4;CCNA2 chromodomain helicase DNA binding protein 4;cyclin A2 2563 322 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A7183.[MT7]-VAPLK[MT7].2y3_1.heavy 408.283 / 501.352 139472.0 21.213899612426758 48 20 10 10 8 10.369598762900152 9.643574673089104 0.0 4 0.9940174930033158 15.947918594058505 139472.0 200.3926500698198 0.0 - - - - - - - 258.0 278 2 CHD4;CCNA2 chromodomain helicase DNA binding protein 4;cyclin A2 2565 323 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9050.[MT7]-NQSQVVFSHR.3b4_1.heavy 449.241 / 602.302 42706.0 20.262699127197266 48 18 10 10 10 4.571259414211835 21.875809473665967 0.0 3 0.9836767891606332 9.646439437512155 42706.0 68.25959016393442 1.0 - - - - - - - 390.4 85 5 UBOX5 U-box domain containing 5 2567 323 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9050.[MT7]-NQSQVVFSHR.3b5_1.heavy 449.241 / 701.37 27820.0 20.262699127197266 48 18 10 10 10 4.571259414211835 21.875809473665967 0.0 3 0.9836767891606332 9.646439437512155 27820.0 131.1188524590164 0.0 - - - - - - - 366.0 55 8 UBOX5 U-box domain containing 5 2569 323 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9050.[MT7]-NQSQVVFSHR.3y4_1.heavy 449.241 / 546.278 89316.0 20.262699127197266 48 18 10 10 10 4.571259414211835 21.875809473665967 0.0 3 0.9836767891606332 9.646439437512155 89316.0 161.72433221682456 0.0 - - - - - - - 341.6 178 5 UBOX5 U-box domain containing 5 2571 323 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9050.[MT7]-NQSQVVFSHR.3y5_1.heavy 449.241 / 645.347 36605.0 20.262699127197266 48 18 10 10 10 4.571259414211835 21.875809473665967 0.0 3 0.9836767891606332 9.646439437512155 36605.0 129.87488290398127 0.0 - - - - - - - 325.3333333333333 73 3 UBOX5 U-box domain containing 5 2573 324 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A360.[MT7]-SLNVSSSVNQASR.3b4_1.heavy 498.266 / 558.337 27380.0 22.16819953918457 41 15 6 10 10 2.345655635179216 42.63200382027077 0.0 3 0.957184946588092 5.942952892108289 27380.0 47.662468895380286 0.0 - - - - - - - 1730.2857142857142 54 7 HERC2 hect domain and RLD 2 2575 324 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A360.[MT7]-SLNVSSSVNQASR.3b5_1.heavy 498.266 / 645.369 4739.0 22.16819953918457 41 15 6 10 10 2.345655635179216 42.63200382027077 0.0 3 0.957184946588092 5.942952892108289 4739.0 6.294686907020872 3.0 - - - - - - - 263.0 123 3 HERC2 hect domain and RLD 2 2577 324 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A360.[MT7]-SLNVSSSVNQASR.3y8_1.heavy 498.266 / 848.422 6318.0 22.16819953918457 41 15 6 10 10 2.345655635179216 42.63200382027077 0.0 3 0.957184946588092 5.942952892108289 6318.0 35.17176961205186 0.0 - - - - - - - 263.0 12 4 HERC2 hect domain and RLD 2 2579 324 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A360.[MT7]-SLNVSSSVNQASR.3y5_1.heavy 498.266 / 575.29 37121.0 22.16819953918457 41 15 6 10 10 2.345655635179216 42.63200382027077 0.0 3 0.957184946588092 5.942952892108289 37121.0 57.96027595926532 0.0 - - - - - - - 263.0 74 5 HERC2 hect domain and RLD 2 2581 325 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9058.[MT7]-IVTYK[MT7].2b3_1.heavy 456.294 / 458.31 11953.0 22.944599151611328 36 10 10 10 6 0.7476913767059247 81.60941083795872 0.0 6 0.8364909743720726 3.009456553468694 11953.0 29.051614638059405 0.0 - - - - - - - 633.6666666666666 23 9 POLD3 polymerase (DNA-directed), delta 3, accessory subunit 2583 325 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9058.[MT7]-IVTYK[MT7].2y4_1.heavy 456.294 / 654.394 135281.0 22.944599151611328 36 10 10 10 6 0.7476913767059247 81.60941083795872 0.0 6 0.8364909743720726 3.009456553468694 135281.0 224.21118684948968 1.0 - - - - - - - 272.0 270 4 POLD3 polymerase (DNA-directed), delta 3, accessory subunit 2585 325 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9058.[MT7]-IVTYK[MT7].2y3_1.heavy 456.294 / 555.326 75247.0 22.944599151611328 36 10 10 10 6 0.7476913767059247 81.60941083795872 0.0 6 0.8364909743720726 3.009456553468694 75247.0 221.14682626966274 1.0 - - - - - - - 272.0 179 2 POLD3 polymerase (DNA-directed), delta 3, accessory subunit 2587 325 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9058.[MT7]-IVTYK[MT7].2y1_1.heavy 456.294 / 291.215 36944.0 22.944599151611328 36 10 10 10 6 0.7476913767059247 81.60941083795872 0.0 6 0.8364909743720726 3.009456553468694 36944.0 9.47865539869088 4.0 - - - - - - - 1630.0 141 1 POLD3 polymerase (DNA-directed), delta 3, accessory subunit 2589 326 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9197.[MT7]-WNPTQNVR.2y4_1.heavy 579.81 / 516.289 5213.0 24.289950370788574 43 20 10 5 8 13.371370372375983 7.478665029471531 0.046199798583984375 4 0.994103175377191 16.063479361855514 5213.0 5.803919014558426 3.0 - - - - - - - 786.1428571428571 12 7 UBE2R2;CDC34 ubiquitin-conjugating enzyme E2R 2;cell division cycle 34 homolog (S. cerevisiae) 2591 326 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9197.[MT7]-WNPTQNVR.2y5_1.heavy 579.81 / 617.337 9267.0 24.289950370788574 43 20 10 5 8 13.371370372375983 7.478665029471531 0.046199798583984375 4 0.994103175377191 16.063479361855514 9267.0 5.759875690607735 1.0 - - - - - - - 290.0 23 4 UBE2R2;CDC34 ubiquitin-conjugating enzyme E2R 2;cell division cycle 34 homolog (S. cerevisiae) 2593 326 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9197.[MT7]-WNPTQNVR.2y6_1.heavy 579.81 / 714.389 94411.0 24.289950370788574 43 20 10 5 8 13.371370372375983 7.478665029471531 0.046199798583984375 4 0.994103175377191 16.063479361855514 94411.0 84.06343110136592 0.0 - - - - - - - 290.0 188 2 UBE2R2;CDC34 ubiquitin-conjugating enzyme E2R 2;cell division cycle 34 homolog (S. cerevisiae) 2595 326 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9197.[MT7]-WNPTQNVR.2y7_1.heavy 579.81 / 828.432 85723.0 24.289950370788574 43 20 10 5 8 13.371370372375983 7.478665029471531 0.046199798583984375 4 0.994103175377191 16.063479361855514 85723.0 204.29445909550662 0.0 - - - - - - - 290.0 171 1 UBE2R2;CDC34 ubiquitin-conjugating enzyme E2R 2;cell division cycle 34 homolog (S. cerevisiae) 2597 327 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9196.[MT7]-TAVNLPLER.2y4_1.heavy 578.844 / 514.298 29667.0 28.419200897216797 47 17 10 10 10 2.6483923959145095 30.031078474682595 0.0 3 0.9754002027284423 7.852397330227307 29667.0 27.007186286027384 0.0 - - - - - - - 333.0 59 3 CDC25B cell division cycle 25 homolog B (S. pombe) 2599 327 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9196.[MT7]-TAVNLPLER.2y8_1.heavy 578.844 / 911.531 45667.0 28.419200897216797 47 17 10 10 10 2.6483923959145095 30.031078474682595 0.0 3 0.9754002027284423 7.852397330227307 45667.0 78.66988655663917 0.0 - - - - - - - 333.0 91 3 CDC25B cell division cycle 25 homolog B (S. pombe) 2601 327 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9196.[MT7]-TAVNLPLER.2b4_1.heavy 578.844 / 530.305 26000.0 28.419200897216797 47 17 10 10 10 2.6483923959145095 30.031078474682595 0.0 3 0.9754002027284423 7.852397330227307 26000.0 24.33183554515194 0.0 - - - - - - - 333.0 52 4 CDC25B cell division cycle 25 homolog B (S. pombe) 2603 327 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9196.[MT7]-TAVNLPLER.2y6_1.heavy 578.844 / 741.425 37333.0 28.419200897216797 47 17 10 10 10 2.6483923959145095 30.031078474682595 0.0 3 0.9754002027284423 7.852397330227307 37333.0 25.05265428229579 1.0 - - - - - - - 333.0 97 7 CDC25B cell division cycle 25 homolog B (S. pombe) 2605 328 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9056.[MT7]-FQPGYR.2y4_1.heavy 456.246 / 492.257 115238.0 21.71489906311035 43 17 6 10 10 2.302635783695255 34.271125853357766 0.0 3 0.9703571301191385 7.15028835672334 115238.0 57.644007036971836 0.0 - - - - - - - 258.0 230 1 MAPK1 mitogen-activated protein kinase 1 2607 328 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9056.[MT7]-FQPGYR.2y5_1.heavy 456.246 / 620.315 65224.0 21.71489906311035 43 17 6 10 10 2.302635783695255 34.271125853357766 0.0 3 0.9703571301191385 7.15028835672334 65224.0 288.89054744772517 0.0 - - - - - - - 258.0 130 4 MAPK1 mitogen-activated protein kinase 1 2609 328 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9056.[MT7]-FQPGYR.2b4_1.heavy 456.246 / 574.311 21655.0 21.71489906311035 43 17 6 10 10 2.302635783695255 34.271125853357766 0.0 3 0.9703571301191385 7.15028835672334 21655.0 83.93875861624686 1.0 - - - - - - - 258.0 383 5 MAPK1 mitogen-activated protein kinase 1 2611 328 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9056.[MT7]-FQPGYR.2y1_1.heavy 456.246 / 175.119 42022.0 21.71489906311035 43 17 6 10 10 2.302635783695255 34.271125853357766 0.0 3 0.9703571301191385 7.15028835672334 42022.0 27.358105674563973 0.0 - - - - - - - 258.0 84 1 MAPK1 mitogen-activated protein kinase 1 2613 329 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9195.[MT7]-FYVQALLR.2b3_1.heavy 577.346 / 554.31 7877.0 37.76424980163574 37 11 10 6 10 1.3403290111532737 53.02833878473912 0.036502838134765625 3 0.8759785889110543 3.467527058483531 7877.0 16.527038917089676 0.0 - - - - - - - 731.7142857142857 15 7 KEAP1 kelch-like ECH-associated protein 1 2615 329 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9195.[MT7]-FYVQALLR.2b4_1.heavy 577.346 / 682.368 5317.0 37.76424980163574 37 11 10 6 10 1.3403290111532737 53.02833878473912 0.036502838134765625 3 0.8759785889110543 3.467527058483531 5317.0 9.986791857551834 0.0 - - - - - - - 253.28571428571428 10 7 KEAP1 kelch-like ECH-associated protein 1 2617 329 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9195.[MT7]-FYVQALLR.2y6_1.heavy 577.346 / 699.451 13588.0 37.76424980163574 37 11 10 6 10 1.3403290111532737 53.02833878473912 0.036502838134765625 3 0.8759785889110543 3.467527058483531 13588.0 28.16463620981387 0.0 - - - - - - - 295.5 27 10 KEAP1 kelch-like ECH-associated protein 1 2619 329 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9195.[MT7]-FYVQALLR.2b5_1.heavy 577.346 / 753.405 8665.0 37.76424980163574 37 11 10 6 10 1.3403290111532737 53.02833878473912 0.036502838134765625 3 0.8759785889110543 3.467527058483531 8665.0 41.1257614213198 0.0 - - - - - - - 295.5 17 6 KEAP1 kelch-like ECH-associated protein 1 2621 330 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9055.[MT7]-TTSGDER.2y5_1.heavy 455.223 / 563.242 5417.0 11.94909954071045 46 16 10 10 10 2.4684823367512423 40.510721308870906 0.0 3 0.9652155492522161 6.597855463975297 5417.0 2.7684838160136285 0.0 - - - - - - - 155.85454545454544 10 55 UBE3B ubiquitin protein ligase E3B 2623 330 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9055.[MT7]-TTSGDER.2y6_1.heavy 455.223 / 664.29 19356.0 11.94909954071045 46 16 10 10 10 2.4684823367512423 40.510721308870906 0.0 3 0.9652155492522161 6.597855463975297 19356.0 181.47300677436164 0.0 - - - - - - - 133.44230769230768 38 52 UBE3B ubiquitin protein ligase E3B 2625 330 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9055.[MT7]-TTSGDER.2y2_1.heavy 455.223 / 304.161 135150.0 11.94909954071045 46 16 10 10 10 2.4684823367512423 40.510721308870906 0.0 3 0.9652155492522161 6.597855463975297 135150.0 373.72607655502395 0.0 - - - - - - - 1233.857142857143 270 7 UBE3B ubiquitin protein ligase E3B 2627 330 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9055.[MT7]-TTSGDER.2b5_1.heavy 455.223 / 606.285 90984.0 11.94909954071045 46 16 10 10 10 2.4684823367512423 40.510721308870906 0.0 3 0.9652155492522161 6.597855463975297 90984.0 459.027550547924 0.0 - - - - - - - 747.1818181818181 181 11 UBE3B ubiquitin protein ligase E3B 2629 331 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 ODP2_ECOLI.AEAPAAAPAAK.2y7.peptide 484.26 / 599.35 211340.0 15.01360034942627 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 211340.0 230.0934625366063 0.0 - - - - - - - 346.0 422 4 2631 331 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 ODP2_ECOLI.AEAPAAAPAAK.2y8.peptide 484.26 / 696.4 309042.0 15.01360034942627 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 309042.0 1767.776722443244 0.0 - - - - - - - 230.66666666666666 618 3 2633 331 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 ODP2_ECOLI.AEAPAAAPAAK.2y6.peptide 484.26 / 528.31 174616.0 15.01360034942627 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 174616.0 530.5429487158095 0.0 - - - - - - - 288.3333333333333 349 3 2635 332 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A359.[MT7]-RAVDC[CAM]PENIK[MT7].3y3_1.heavy 497.273 / 518.342 76002.0 19.39080047607422 43 13 10 10 10 1.3383595574144989 48.85773717433997 0.0 3 0.9133625500114182 4.162200511895802 76002.0 315.0217990108532 0.0 - - - - - - - 298.0 152 7 CHEK1 CHK1 checkpoint homolog (S. pombe) 2637 332 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A359.[MT7]-RAVDC[CAM]PENIK[MT7].3b4_1.heavy 497.273 / 586.343 59550.0 19.39080047607422 43 13 10 10 10 1.3383595574144989 48.85773717433997 0.0 3 0.9133625500114182 4.162200511895802 59550.0 76.31645532926548 0.0 - - - - - - - 278.2 119 5 CHEK1 CHK1 checkpoint homolog (S. pombe) 2639 332 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A359.[MT7]-RAVDC[CAM]PENIK[MT7].3b5_1.heavy 497.273 / 746.374 31281.0 19.39080047607422 43 13 10 10 10 1.3383595574144989 48.85773717433997 0.0 3 0.9133625500114182 4.162200511895802 31281.0 60.98919523813748 0.0 - - - - - - - 397.0 62 7 CHEK1 CHK1 checkpoint homolog (S. pombe) 2641 332 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A359.[MT7]-RAVDC[CAM]PENIK[MT7].3y4_1.heavy 497.273 / 647.385 20159.0 19.39080047607422 43 13 10 10 10 1.3383595574144989 48.85773717433997 0.0 3 0.9133625500114182 4.162200511895802 20159.0 33.56226986844557 0.0 - - - - - - - 278.2 40 5 CHEK1 CHK1 checkpoint homolog (S. pombe) 2643 333 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A357.[MT7]-RNVTLQNIIDR.3b4_1.heavy 495.959 / 615.37 18333.0 29.2906494140625 45 20 10 5 10 11.797273505762293 8.476534849442604 0.04949951171875 3 0.9980706650304598 28.092390845692197 18333.0 55.77085783783783 0.0 - - - - - - - 333.0 36 3 MID2;MID1 midline 2;midline 1 (Opitz/BBB syndrome) 2645 333 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A357.[MT7]-RNVTLQNIIDR.3b5_1.heavy 495.959 / 728.453 14333.0 29.2906494140625 45 20 10 5 10 11.797273505762293 8.476534849442604 0.04949951171875 3 0.9980706650304598 28.092390845692197 14333.0 51.92419783783784 1.0 - - - - - - - 333.0 38 6 MID2;MID1 midline 2;midline 1 (Opitz/BBB syndrome) 2647 333 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A357.[MT7]-RNVTLQNIIDR.3y4_1.heavy 495.959 / 516.314 16000.0 29.2906494140625 45 20 10 5 10 11.797273505762293 8.476534849442604 0.04949951171875 3 0.9980706650304598 28.092390845692197 16000.0 27.108515483540568 0.0 - - - - - - - 333.0 32 4 MID2;MID1 midline 2;midline 1 (Opitz/BBB syndrome) 2649 333 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A357.[MT7]-RNVTLQNIIDR.3y5_1.heavy 495.959 / 630.357 30667.0 29.2906494140625 45 20 10 5 10 11.797273505762293 8.476534849442604 0.04949951171875 3 0.9980706650304598 28.092390845692197 30667.0 180.41036936936933 0.0 - - - - - - - 333.0 61 6 MID2;MID1 midline 2;midline 1 (Opitz/BBB syndrome) 2651 334 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A354.[MT7]-ALSIFNELRK[MT7].3y6_1.heavy 493.636 / 950.554 3106.0 34.904598236083984 37 7 10 10 10 0.4451826342299227 108.15954156401469 0.0 3 0.7113939911950874 2.239563799697663 3106.0 6.995366795366795 1.0 - - - - - - - 259.0 6 1 CDC23 cell division cycle 23 homolog (S. cerevisiae) 2653 334 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A354.[MT7]-ALSIFNELRK[MT7].3y8_1.heavy 493.636 / 1150.67 2847.0 34.904598236083984 37 7 10 10 10 0.4451826342299227 108.15954156401469 0.0 3 0.7113939911950874 2.239563799697663 2847.0 -4.396911196911197 0.0 - - - - - - - 259.0 5 2 CDC23 cell division cycle 23 homolog (S. cerevisiae) 2655 334 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A354.[MT7]-ALSIFNELRK[MT7].3y5_1.heavy 493.636 / 803.486 9575.0 34.904598236083984 37 7 10 10 10 0.4451826342299227 108.15954156401469 0.0 3 0.7113939911950874 2.239563799697663 9575.0 72.79218146718146 0.0 - - - - - - - 259.0 19 2 CDC23 cell division cycle 23 homolog (S. cerevisiae) 2657 334 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A354.[MT7]-ALSIFNELRK[MT7].3y9_2.heavy 493.636 / 632.381 17857.0 34.904598236083984 37 7 10 10 10 0.4451826342299227 108.15954156401469 0.0 3 0.7113939911950874 2.239563799697663 17857.0 81.83954862078573 0.0 - - - - - - - 259.0 35 6 CDC23 cell division cycle 23 homolog (S. cerevisiae) 2659 335 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A352.[MT7]-EASQTSSSPAPK[MT7].3y6_1.heavy 493.263 / 730.422 3868.0 14.888299942016602 41 11 10 10 10 1.3867452460935632 58.94934730147953 0.0 3 0.8741676072431148 3.4419396999622363 3868.0 9.417977590432008 3.0 - - - - - - - 230.14285714285714 9 7 CCND3 cyclin D3 2661 335 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A352.[MT7]-EASQTSSSPAPK[MT7].3b4_1.heavy 493.263 / 560.28 10477.0 14.888299942016602 41 11 10 10 10 1.3867452460935632 58.94934730147953 0.0 3 0.8741676072431148 3.4419396999622363 10477.0 26.374048980809476 0.0 - - - - - - - 302.0 20 8 CCND3 cyclin D3 2663 335 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A352.[MT7]-EASQTSSSPAPK[MT7].3y4_1.heavy 493.263 / 556.357 23210.0 14.888299942016602 41 11 10 10 10 1.3867452460935632 58.94934730147953 0.0 3 0.8741676072431148 3.4419396999622363 23210.0 107.56115189158666 0.0 - - - - - - - 287.7142857142857 46 14 CCND3 cyclin D3 2665 335 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A352.[MT7]-EASQTSSSPAPK[MT7].3y5_1.heavy 493.263 / 643.39 6286.0 14.888299942016602 41 11 10 10 10 1.3867452460935632 58.94934730147953 0.0 3 0.8741676072431148 3.4419396999622363 6286.0 28.974952140208963 0.0 - - - - - - - 322.3333333333333 12 6 CCND3 cyclin D3 2667 336 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A350.[MT7]-VLELFQPSELR.2y8_1.heavy 737.923 / 989.542 34885.0 39.770376205444336 39 13 10 6 10 1.1085483706187484 60.13870791173139 0.03890228271484375 3 0.9083048258225925 4.0440203252815765 34885.0 88.16247826567172 0.0 - - - - - - - 771.4444444444445 69 9 HERC3 hect domain and RLD 3 2669 336 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A350.[MT7]-VLELFQPSELR.2y5_1.heavy 737.923 / 601.33 51460.0 39.770376205444336 39 13 10 6 10 1.1085483706187484 60.13870791173139 0.03890228271484375 3 0.9083048258225925 4.0440203252815765 51460.0 57.09153750430541 0.0 - - - - - - - 316.0 102 1 HERC3 hect domain and RLD 3 2671 336 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A350.[MT7]-VLELFQPSELR.2y9_1.heavy 737.923 / 1118.58 20679.0 39.770376205444336 39 13 10 6 10 1.1085483706187484 60.13870791173139 0.03890228271484375 3 0.9083048258225925 4.0440203252815765 20679.0 82.91238872254822 0.0 - - - - - - - 280.8888888888889 41 9 HERC3 hect domain and RLD 3 2673 336 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A350.[MT7]-VLELFQPSELR.2y10_1.heavy 737.923 / 1231.67 32833.0 39.770376205444336 39 13 10 6 10 1.1085483706187484 60.13870791173139 0.03890228271484375 3 0.9083048258225925 4.0440203252815765 32833.0 58.03848669683127 0.0 - - - - - - - 355.5 65 8 HERC3 hect domain and RLD 3 2675 337 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9060.[MT7]-LQVAWR.2b3_1.heavy 458.778 / 485.32 53667.0 29.859899520874023 50 20 10 10 10 5.961275204296704 16.77493431739623 0.0 3 0.9934694831268253 15.2634237351309 53667.0 62.45589682063587 0.0 - - - - - - - 667.0 107 3 UBE4A ubiquitination factor E4A (UFD2 homolog, yeast) 2677 337 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9060.[MT7]-LQVAWR.2y4_1.heavy 458.778 / 531.304 70333.0 29.859899520874023 50 20 10 10 10 5.961275204296704 16.77493431739623 0.0 3 0.9934694831268253 15.2634237351309 70333.0 148.71713430606525 0.0 - - - - - - - 333.0 140 5 UBE4A ubiquitination factor E4A (UFD2 homolog, yeast) 2679 337 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9060.[MT7]-LQVAWR.2y5_1.heavy 458.778 / 659.362 192667.0 29.859899520874023 50 20 10 10 10 5.961275204296704 16.77493431739623 0.0 3 0.9934694831268253 15.2634237351309 192667.0 170.12709751843357 0.0 - - - - - - - 667.0 385 2 UBE4A ubiquitination factor E4A (UFD2 homolog, yeast) 2681 337 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9060.[MT7]-LQVAWR.2b4_1.heavy 458.778 / 556.357 83667.0 29.859899520874023 50 20 10 10 10 5.961275204296704 16.77493431739623 0.0 3 0.9934694831268253 15.2634237351309 83667.0 184.43776610569435 0.0 - - - - - - - 333.0 167 5 UBE4A ubiquitination factor E4A (UFD2 homolog, yeast) 2683 338 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9166.[MT7]-LLVYLWR.2y4_1.heavy 553.846 / 637.346 21976.0 43.28660011291504 46 20 10 6 10 18.515306458224384 5.400936799270779 0.03440093994140625 3 0.994113627661173 16.077748829884705 21976.0 115.51265062752029 0.0 - - - - - - - 258.09090909090907 43 11 DET1 de-etiolated homolog 1 (Arabidopsis) 2685 338 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9166.[MT7]-LLVYLWR.2y5_1.heavy 553.846 / 736.414 26813.0 43.28660011291504 46 20 10 6 10 18.515306458224384 5.400936799270779 0.03440093994140625 3 0.994113627661173 16.077748829884705 26813.0 104.41896497666622 0.0 - - - - - - - 232.71428571428572 53 14 DET1 de-etiolated homolog 1 (Arabidopsis) 2687 338 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9166.[MT7]-LLVYLWR.2b4_1.heavy 553.846 / 633.409 11356.0 43.28660011291504 46 20 10 6 10 18.515306458224384 5.400936799270779 0.03440093994140625 3 0.994113627661173 16.077748829884705 11356.0 61.08895539959248 0.0 - - - - - - - 210.25 22 12 DET1 de-etiolated homolog 1 (Arabidopsis) 2689 338 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9166.[MT7]-LLVYLWR.2y6_1.heavy 553.846 / 849.498 42480.0 43.28660011291504 46 20 10 6 10 18.515306458224384 5.400936799270779 0.03440093994140625 3 0.994113627661173 16.077748829884705 42480.0 413.84077205382624 0.0 - - - - - - - 183.875 84 8 DET1 de-etiolated homolog 1 (Arabidopsis) 2691 339 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9063.[MT7]-AVGNFK[MT7].2y4_1.heavy 462.281 / 609.348 83234.0 21.562299728393555 48 18 10 10 10 6.159555198266712 16.234938527402083 0.0 3 0.9872081927405512 10.900147523273478 83234.0 182.9975436234027 0.0 - - - - - - - 708.5 166 12 E2F2 E2F transcription factor 2 2693 339 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9063.[MT7]-AVGNFK[MT7].2y5_1.heavy 462.281 / 708.416 65454.0 21.562299728393555 48 18 10 10 10 6.159555198266712 16.234938527402083 0.0 3 0.9872081927405512 10.900147523273478 65454.0 196.9481503158794 0.0 - - - - - - - 585.3636363636364 130 11 E2F2 E2F transcription factor 2 2695 339 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9063.[MT7]-AVGNFK[MT7].2b4_1.heavy 462.281 / 486.279 20100.0 21.562299728393555 48 18 10 10 10 6.159555198266712 16.234938527402083 0.0 3 0.9872081927405512 10.900147523273478 20100.0 22.063137687415917 0.0 - - - - - - - 258.0 40 4 E2F2 E2F transcription factor 2 2697 339 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9063.[MT7]-AVGNFK[MT7].2y3_1.heavy 462.281 / 552.326 20873.0 21.562299728393555 48 18 10 10 10 6.159555198266712 16.234938527402083 0.0 3 0.9872081927405512 10.900147523273478 20873.0 40.522232256119764 0.0 - - - - - - - 258.0 41 6 E2F2 E2F transcription factor 2 2699 340 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9168.[MT7]-LIFQEC[CAM]R.2b3_1.heavy 555.298 / 518.346 11000.0 30.11280059814453 48 18 10 10 10 3.410855798921832 24.108482211136412 0.0 3 0.9804586704813212 8.814050692766187 11000.0 8.470471495927988 0.0 - - - - - - - 333.0 22 3 FBXW8 F-box and WD repeat domain containing 8 2701 340 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9168.[MT7]-LIFQEC[CAM]R.2y4_1.heavy 555.298 / 592.251 18333.0 30.11280059814453 48 18 10 10 10 3.410855798921832 24.108482211136412 0.0 3 0.9804586704813212 8.814050692766187 18333.0 31.96665419112133 0.0 - - - - - - - 333.0 36 4 FBXW8 F-box and WD repeat domain containing 8 2703 340 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9168.[MT7]-LIFQEC[CAM]R.2y5_1.heavy 555.298 / 739.319 50667.0 30.11280059814453 48 18 10 10 10 3.410855798921832 24.108482211136412 0.0 3 0.9804586704813212 8.814050692766187 50667.0 39.15420918488787 0.0 - - - - - - - 333.0 101 3 FBXW8 F-box and WD repeat domain containing 8 2705 340 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9168.[MT7]-LIFQEC[CAM]R.2y6_1.heavy 555.298 / 852.403 46333.0 30.11280059814453 48 18 10 10 10 3.410855798921832 24.108482211136412 0.0 3 0.9804586704813212 8.814050692766187 46333.0 203.04363831597715 0.0 - - - - - - - 333.0 92 3 FBXW8 F-box and WD repeat domain containing 8 2707 341 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9066.[MT7]-TYLDK[MT7].2b3_1.heavy 464.273 / 522.304 18736.0 21.523700714111328 46 16 10 10 10 1.9444714451820115 40.89838475379678 0.0 3 0.9680649205438305 6.887565995681014 18736.0 23.115844155844155 0.0 - - - - - - - 623.1428571428571 37 7 CDK4 cyclin-dependent kinase 4 2709 341 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9066.[MT7]-TYLDK[MT7].2y4_1.heavy 464.273 / 682.389 81618.0 21.523700714111328 46 16 10 10 10 1.9444714451820115 40.89838475379678 0.0 3 0.9680649205438305 6.887565995681014 81618.0 40.84433246753247 0.0 - - - - - - - 623.1428571428571 163 7 CDK4 cyclin-dependent kinase 4 2711 341 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9066.[MT7]-TYLDK[MT7].2b4_1.heavy 464.273 / 637.331 60315.0 21.523700714111328 46 16 10 10 10 1.9444714451820115 40.89838475379678 0.0 3 0.9680649205438305 6.887565995681014 60315.0 136.91942665003955 0.0 - - - - - - - 1055.4444444444443 120 9 CDK4 cyclin-dependent kinase 4 2713 341 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9066.[MT7]-TYLDK[MT7].2y3_1.heavy 464.273 / 519.326 47225.0 21.523700714111328 46 16 10 10 10 1.9444714451820115 40.89838475379678 0.0 3 0.9680649205438305 6.887565995681014 47225.0 168.46345029239768 0.0 - - - - - - - 257.0 94 5 CDK4 cyclin-dependent kinase 4 2715 342 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9164.[MT7]-ETALQQK[MT7].2y4_1.heavy 553.326 / 660.416 28979.0 18.171300888061523 50 20 10 10 10 12.229413124122583 8.177007268055199 0.0 3 0.9908915374996707 12.921401887295945 28979.0 74.23486556301924 0.0 - - - - - - - 348.75 57 8 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 2717 342 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9164.[MT7]-ETALQQK[MT7].2b4_1.heavy 553.326 / 559.321 26403.0 18.171300888061523 50 20 10 10 10 12.229413124122583 8.177007268055199 0.0 3 0.9908915374996707 12.921401887295945 26403.0 44.42314958339633 0.0 - - - - - - - 306.7142857142857 52 7 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 2719 342 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9164.[MT7]-ETALQQK[MT7].2b6_1.heavy 553.326 / 815.438 14811.0 18.171300888061523 50 20 10 10 10 12.229413124122583 8.177007268055199 0.0 3 0.9908915374996707 12.921401887295945 14811.0 11.213919627256843 1.0 - - - - - - - 268.5 29 8 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 2721 342 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9164.[MT7]-ETALQQK[MT7].2y6_1.heavy 553.326 / 832.501 42288.0 18.171300888061523 50 20 10 10 10 12.229413124122583 8.177007268055199 0.0 3 0.9908915374996707 12.921401887295945 42288.0 83.29603725261933 0.0 - - - - - - - 766.8571428571429 84 7 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 2723 343 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9069.[MT7]-FFPLIEVNK[MT7].3y3_1.heavy 465.614 / 504.326 25101.0 39.30039978027344 45 15 10 10 10 2.9575509350894995 33.81175918681984 0.0 3 0.959974406951477 6.148004249543493 25101.0 152.89211705798812 1.0 - - - - - - - 328.0 61 6 RPA1 replication protein A1, 70kDa 2725 343 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9069.[MT7]-FFPLIEVNK[MT7].3b4_1.heavy 465.614 / 649.383 31336.0 39.30039978027344 45 15 10 10 10 2.9575509350894995 33.81175918681984 0.0 3 0.959974406951477 6.148004249543493 31336.0 215.27577235772355 0.0 - - - - - - - 328.0 62 9 RPA1 replication protein A1, 70kDa 2727 343 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9069.[MT7]-FFPLIEVNK[MT7].3b3_1.heavy 465.614 / 536.299 8367.0 39.30039978027344 45 15 10 10 10 2.9575509350894995 33.81175918681984 0.0 3 0.959974406951477 6.148004249543493 8367.0 39.284085365853656 0.0 - - - - - - - 246.0 16 8 RPA1 replication protein A1, 70kDa 2729 343 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9069.[MT7]-FFPLIEVNK[MT7].3y4_1.heavy 465.614 / 633.369 25265.0 39.30039978027344 45 15 10 10 10 2.9575509350894995 33.81175918681984 0.0 3 0.959974406951477 6.148004249543493 25265.0 305.02865853658534 0.0 - - - - - - - 273.3333333333333 50 3 RPA1 replication protein A1, 70kDa 2731 344 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9160.[MT7]-QVSQQPK[MT7].2y5_1.heavy 551.827 / 731.417 9093.0 14.164650201797485 40 14 10 6 10 1.1533981883327507 53.3128383723626 0.03699970245361328 3 0.940021762571438 5.013841077130926 9093.0 68.5595060123497 0.0 - - - - - - - 234.54545454545453 18 11 POLD3 polymerase (DNA-directed), delta 3, accessory subunit 2733 344 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9160.[MT7]-QVSQQPK[MT7].2b4_1.heavy 551.827 / 587.327 5971.0 14.164650201797485 40 14 10 6 10 1.1533981883327507 53.3128383723626 0.03699970245361328 3 0.940021762571438 5.013841077130926 5971.0 49.50087584911115 0.0 - - - - - - - 209.9090909090909 11 11 POLD3 polymerase (DNA-directed), delta 3, accessory subunit 2735 344 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9160.[MT7]-QVSQQPK[MT7].2y6_1.heavy 551.827 / 830.485 7600.0 14.164650201797485 40 14 10 6 10 1.1533981883327507 53.3128383723626 0.03699970245361328 3 0.940021762571438 5.013841077130926 7600.0 30.270475900635297 0.0 - - - - - - - 290.57142857142856 15 7 POLD3 polymerase (DNA-directed), delta 3, accessory subunit 2737 344 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9160.[MT7]-QVSQQPK[MT7].2b5_1.heavy 551.827 / 715.385 8143.0 14.164650201797485 40 14 10 6 10 1.1533981883327507 53.3128383723626 0.03699970245361328 3 0.940021762571438 5.013841077130926 8143.0 20.005264968317597 0.0 - - - - - - - 226.16666666666666 16 12 POLD3 polymerase (DNA-directed), delta 3, accessory subunit 2739 345 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A487.[MT7]-HYLAQWIESQPWDAIDLDNPQDR.3b5_1.heavy 985.478 / 757.411 34292.0 41.531949043273926 46 20 10 6 10 5.506798008269506 18.159373169277494 0.036998748779296875 3 0.9932204045016456 14.980103402355322 34292.0 110.40643919510062 0.0 - - - - - - - 228.6 68 10 STAT5A signal transducer and activator of transcription 5A 2741 345 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A487.[MT7]-HYLAQWIESQPWDAIDLDNPQDR.3b3_1.heavy 985.478 / 558.316 11431.0 41.531949043273926 46 20 10 6 10 5.506798008269506 18.159373169277494 0.036998748779296875 3 0.9932204045016456 14.980103402355322 11431.0 20.032521704017768 0.0 - - - - - - - 293.0769230769231 22 13 STAT5A signal transducer and activator of transcription 5A 2743 345 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A487.[MT7]-HYLAQWIESQPWDAIDLDNPQDR.3y8_1.heavy 985.478 / 972.438 20194.0 41.531949043273926 46 20 10 6 10 5.506798008269506 18.159373169277494 0.036998748779296875 3 0.9932204045016456 14.980103402355322 20194.0 103.88514435695538 0.0 - - - - - - - 598.7142857142857 40 7 STAT5A signal transducer and activator of transcription 5A 2745 345 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A487.[MT7]-HYLAQWIESQPWDAIDLDNPQDR.3y10_1.heavy 985.478 / 1156.56 10542.0 41.531949043273926 46 20 10 6 10 5.506798008269506 18.159373169277494 0.036998748779296875 3 0.9932204045016456 14.980103402355322 10542.0 54.895874015748035 0.0 - - - - - - - 207.8181818181818 21 11 STAT5A signal transducer and activator of transcription 5A 2747 346 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A489.[MT7]-ITSVQPPTGLQEWLK[MT7].3y10_2.heavy 662.382 / 656.873 90547.0 37.85490036010742 41 11 10 10 10 1.0515133769360598 75.41714557990235 0.0 3 0.8793987619085203 3.51740144555227 90547.0 60.03318571753929 0.0 - - - - - - - 387.0 181 1 FBXW7 F-box and WD repeat domain containing 7 2749 346 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A489.[MT7]-ITSVQPPTGLQEWLK[MT7].3y3_1.heavy 662.382 / 590.378 39469.0 37.85490036010742 41 11 10 10 10 1.0515133769360598 75.41714557990235 0.0 3 0.8793987619085203 3.51740144555227 39469.0 12.02154379504221 0.0 - - - - - - - 580.0 78 2 FBXW7 F-box and WD repeat domain containing 7 2751 346 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A489.[MT7]-ITSVQPPTGLQEWLK[MT7].3b4_1.heavy 662.382 / 545.341 27280.0 37.85490036010742 41 11 10 10 10 1.0515133769360598 75.41714557990235 0.0 3 0.8793987619085203 3.51740144555227 27280.0 25.024289405684755 0.0 - - - - - - - 387.0 54 3 FBXW7 F-box and WD repeat domain containing 7 2753 346 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A489.[MT7]-ITSVQPPTGLQEWLK[MT7].3b5_1.heavy 662.382 / 673.4 99641.0 37.85490036010742 41 11 10 10 10 1.0515133769360598 75.41714557990235 0.0 3 0.8793987619085203 3.51740144555227 99641.0 56.47263711017723 0.0 - - - - - - - 290.0 199 2 FBXW7 F-box and WD repeat domain containing 7 2755 347 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A347.[MT7]-LAFVLSSNSLK[MT7].3y6_1.heavy 489.632 / 779.438 7768.0 36.04359817504883 50 20 10 10 10 26.757323173215198 3.7372946222102925 0.0 3 0.9978138105215028 26.389995567418616 7768.0 10.501609999814267 1.0 - - - - - - - 304.3333333333333 19 9 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 2757 347 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A347.[MT7]-LAFVLSSNSLK[MT7].3y3_1.heavy 489.632 / 491.331 39298.0 36.04359817504883 50 20 10 10 10 26.757323173215198 3.7372946222102925 0.0 3 0.9978138105215028 26.389995567418616 39298.0 53.71354952884055 0.0 - - - - - - - 380.6666666666667 78 6 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 2759 347 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A347.[MT7]-LAFVLSSNSLK[MT7].3b4_1.heavy 489.632 / 575.367 84080.0 36.04359817504883 50 20 10 10 10 26.757323173215198 3.7372946222102925 0.0 3 0.9978138105215028 26.389995567418616 84080.0 53.79158144348805 0.0 - - - - - - - 228.0 168 2 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 2761 347 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A347.[MT7]-LAFVLSSNSLK[MT7].3b5_1.heavy 489.632 / 688.451 15765.0 36.04359817504883 50 20 10 10 10 26.757323173215198 3.7372946222102925 0.0 3 0.9978138105215028 26.389995567418616 15765.0 28.91380759311278 0.0 - - - - - - - 326.14285714285717 31 7 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 2763 348 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A342.[MT7]-SVIEPLPVTPTR.2y9_1.heavy 726.931 / 1009.57 21333.0 29.885499954223633 40 17 10 3 10 2.3696468418310324 32.89843975188563 0.05120086669921875 3 0.9743401813235648 7.68780782429021 21333.0 51.716693163418284 0.0 - - - - - - - 333.0 42 3 PAK1 p21 protein (Cdc42/Rac)-activated kinase 1 2765 348 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A342.[MT7]-SVIEPLPVTPTR.2y10_1.heavy 726.931 / 1122.65 17333.0 29.885499954223633 40 17 10 3 10 2.3696468418310324 32.89843975188563 0.05120086669921875 3 0.9743401813235648 7.68780782429021 17333.0 68.34355054054055 0.0 - - - - - - - 333.0 34 2 PAK1 p21 protein (Cdc42/Rac)-activated kinase 1 2767 348 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A342.[MT7]-SVIEPLPVTPTR.2b2_1.heavy 726.931 / 331.21 39667.0 29.885499954223633 40 17 10 3 10 2.3696468418310324 32.89843975188563 0.05120086669921875 3 0.9743401813235648 7.68780782429021 39667.0 55.2527474882126 0.0 - - - - - - - 333.0 79 5 PAK1 p21 protein (Cdc42/Rac)-activated kinase 1 2769 348 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A342.[MT7]-SVIEPLPVTPTR.2y11_1.heavy 726.931 / 1221.72 4667.0 29.885499954223633 40 17 10 3 10 2.3696468418310324 32.89843975188563 0.05120086669921875 3 0.9743401813235648 7.68780782429021 4667.0 20.732031394212804 0.0 - - - - - - - 333.0 9 4 PAK1 p21 protein (Cdc42/Rac)-activated kinase 1 2771 349 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A343.[MT7]-SVIEPLPVTPTR.3y3_1.heavy 484.956 / 373.219 N/A N/A - - - - - - - - - 0.0 - - - - - - - PAK1 p21 protein (Cdc42/Rac)-activated kinase 1 2773 349 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A343.[MT7]-SVIEPLPVTPTR.3b1_1.heavy 484.956 / 232.141 N/A N/A - - - - - - - - - 0.0 - - - - - - - PAK1 p21 protein (Cdc42/Rac)-activated kinase 1 2775 349 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A343.[MT7]-SVIEPLPVTPTR.3b3_1.heavy 484.956 / 444.294 N/A N/A - - - - - - - - - 0.0 - - - - - - - PAK1 p21 protein (Cdc42/Rac)-activated kinase 1 2777 349 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A343.[MT7]-SVIEPLPVTPTR.3b2_1.heavy 484.956 / 331.21 N/A N/A - - - - - - - - - 0.0 - - - - - - - PAK1 p21 protein (Cdc42/Rac)-activated kinase 1 2779 350 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 ODP2_ECOLI.EAAPAAAPAAAAAK.2y7.peptide 590.82 / 599.35 349893.0 17.309999465942383 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 349893.0 443.5533823170732 0.0 - - - - - - - 1161.6666666666667 699 3 2781 350 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 ODP2_ECOLI.EAAPAAAPAAAAAK.2y9.peptide 590.82 / 741.43 284301.0 17.309999465942383 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 284301.0 779.1036114982578 0.0 - - - - - - - 410.0 568 2 2783 350 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 ODP2_ECOLI.EAAPAAAPAAAAAK.2y11.peptide 590.82 / 909.52 276102.0 17.309999465942383 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 276102.0 542.1027073170732 0.0 - - - - - - - 410.0 552 2 2785 351 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9072.[MT7]-TIIEGTR.2b3_1.heavy 467.278 / 472.325 15344.0 21.25309944152832 48 18 10 10 10 5.330448412289713 18.760147789713745 0.0 3 0.9854677972313196 10.225140882593871 15344.0 25.606675358539764 0.0 - - - - - - - 256.0 30 6 POLA2 polymerase (DNA directed), alpha 2 (70kD subunit) 2787 351 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9072.[MT7]-TIIEGTR.2y5_1.heavy 467.278 / 575.315 50380.0 21.25309944152832 48 18 10 10 10 5.330448412289713 18.760147789713745 0.0 3 0.9854677972313196 10.225140882593871 50380.0 91.28705444381356 0.0 - - - - - - - 653.2222222222222 100 9 POLA2 polymerase (DNA directed), alpha 2 (70kD subunit) 2789 351 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9072.[MT7]-TIIEGTR.2y6_1.heavy 467.278 / 688.399 53961.0 21.25309944152832 48 18 10 10 10 5.330448412289713 18.760147789713745 0.0 3 0.9854677972313196 10.225140882593871 53961.0 67.50398749022673 0.0 - - - - - - - 256.0 107 6 POLA2 polymerase (DNA directed), alpha 2 (70kD subunit) 2791 351 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9072.[MT7]-TIIEGTR.2b5_1.heavy 467.278 / 658.389 11252.0 21.25309944152832 48 18 10 10 10 5.330448412289713 18.760147789713745 0.0 3 0.9854677972313196 10.225140882593871 11252.0 16.720736923000455 0.0 - - - - - - - 256.0 22 6 POLA2 polymerase (DNA directed), alpha 2 (70kD subunit) 2793 352 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9071.[MT7]-LLEEQR.2y4_1.heavy 466.27 / 561.263 17306.0 23.154800415039062 46 16 10 10 10 2.1064161795481082 37.8243936714897 0.0 3 0.9672289625684887 6.798671551712616 17306.0 48.74322873008293 1.0 - - - - - - - 275.0 34 1 C10orf72;CUL1 chromosome 10 open reading frame 72;cullin 1 2795 352 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9071.[MT7]-LLEEQR.2b3_1.heavy 466.27 / 500.32 12911.0 23.154800415039062 46 16 10 10 10 2.1064161795481082 37.8243936714897 0.0 3 0.9672289625684887 6.798671551712616 12911.0 36.05111402903779 0.0 - - - - - - - 275.0 25 6 C10orf72;CUL1 chromosome 10 open reading frame 72;cullin 1 2797 352 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9071.[MT7]-LLEEQR.2y5_1.heavy 466.27 / 674.347 38733.0 23.154800415039062 46 16 10 10 10 2.1064161795481082 37.8243936714897 0.0 3 0.9672289625684887 6.798671551712616 38733.0 21.089975112494866 0.0 - - - - - - - 275.0 77 1 C10orf72;CUL1 chromosome 10 open reading frame 72;cullin 1 2799 352 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9071.[MT7]-LLEEQR.2b4_1.heavy 466.27 / 629.363 21427.0 23.154800415039062 46 16 10 10 10 2.1064161795481082 37.8243936714897 0.0 3 0.9672289625684887 6.798671551712616 21427.0 3.2987052369979035 1.0 - - - - - - - 275.0 51 5 C10orf72;CUL1 chromosome 10 open reading frame 72;cullin 1 2801 353 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9070.[MT7]-DAIAEIR.2y5_1.heavy 466.27 / 601.367 12999.0 24.798500061035156 28 12 0 10 6 0.8731773359421383 69.97900988836547 0.0 5 0.8855784505684219 3.6130809272768727 12999.0 15.47856049666766 2.0 - - - - - - - 302.0 1798 3 STAG1;STAG2 stromal antigen 1;stromal antigen 2 2803 353 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9070.[MT7]-DAIAEIR.2b4_1.heavy 466.27 / 515.295 10883.0 24.798500061035156 28 12 0 10 6 0.8731773359421383 69.97900988836547 0.0 5 0.8855784505684219 3.6130809272768727 10883.0 23.277861080485117 1.0 - - - - - - - 734.4285714285714 25 7 STAG1;STAG2 stromal antigen 1;stromal antigen 2 2805 353 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9070.[MT7]-DAIAEIR.2y6_1.heavy 466.27 / 672.404 12394.0 24.798500061035156 28 12 0 10 6 0.8731773359421383 69.97900988836547 0.0 5 0.8855784505684219 3.6130809272768727 12394.0 14.689691289966923 0.0 - - - - - - - 302.0 24 6 STAG1;STAG2 stromal antigen 1;stromal antigen 2 2807 353 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9070.[MT7]-DAIAEIR.2b5_1.heavy 466.27 / 644.337 16022.0 24.798500061035156 28 12 0 10 6 0.8731773359421383 69.97900988836547 0.0 5 0.8855784505684219 3.6130809272768727 16022.0 12.150850404408235 1.0 - - - - - - - 302.0 36 6 STAG1;STAG2 stromal antigen 1;stromal antigen 2 2809 354 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9179.[MT7]-NIEFALK[MT7].2y4_1.heavy 561.842 / 622.404 80667.0 31.337200164794922 50 20 10 10 10 34.90844075117552 2.864636685230135 0.0 3 0.9997781991781093 82.86531138168165 80667.0 82.1601161140285 0.0 - - - - - - - 333.0 161 3 HERC2 hect domain and RLD 2 2811 354 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9179.[MT7]-NIEFALK[MT7].2b3_1.heavy 561.842 / 501.279 96667.0 31.337200164794922 50 20 10 10 10 34.90844075117552 2.864636685230135 0.0 3 0.9997781991781093 82.86531138168165 96667.0 68.40885617088156 0.0 - - - - - - - 333.0 193 3 HERC2 hect domain and RLD 2 2813 354 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9179.[MT7]-NIEFALK[MT7].2y5_1.heavy 561.842 / 751.447 69667.0 31.337200164794922 50 20 10 10 10 34.90844075117552 2.864636685230135 0.0 3 0.9997781991781093 82.86531138168165 69667.0 91.96043999999999 0.0 - - - - - - - 333.0 139 3 HERC2 hect domain and RLD 2 2815 354 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9179.[MT7]-NIEFALK[MT7].2y6_1.heavy 561.842 / 864.531 58333.0 31.337200164794922 50 20 10 10 10 34.90844075117552 2.864636685230135 0.0 3 0.9997781991781093 82.86531138168165 58333.0 146.05113943028485 0.0 - - - - - - - 333.0 116 5 HERC2 hect domain and RLD 2 2817 355 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9076.[MT7]-IMILFR.2y4_1.heavy 468.795 / 548.356 13683.0 39.543701171875 48 18 10 10 10 2.487027224791686 40.20864709608317 0.0 3 0.9837536639065706 9.669297428856218 13683.0 52.19913579820534 0.0 - - - - - - - 260.8 27 10 CUL4A cullin 4A 2819 355 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9076.[MT7]-IMILFR.2b3_1.heavy 468.795 / 502.318 20361.0 39.543701171875 48 18 10 10 10 2.487027224791686 40.20864709608317 0.0 3 0.9837536639065706 9.669297428856218 20361.0 162.3883435582822 0.0 - - - - - - - 285.25 40 8 CUL4A cullin 4A 2821 355 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9076.[MT7]-IMILFR.2y5_1.heavy 468.795 / 679.396 56360.0 39.543701171875 48 18 10 10 10 2.487027224791686 40.20864709608317 0.0 3 0.9837536639065706 9.669297428856218 56360.0 188.73108384458078 0.0 - - - - - - - 293.4 112 10 CUL4A cullin 4A 2823 355 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9076.[MT7]-IMILFR.2b4_1.heavy 468.795 / 615.402 14986.0 39.543701171875 48 18 10 10 10 2.487027224791686 40.20864709608317 0.0 3 0.9837536639065706 9.669297428856218 14986.0 88.72079754601228 0.0 - - - - - - - 285.25 29 4 CUL4A cullin 4A 2825 356 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9075.[MT7]-IIRNEQFAIR.3y4_1.heavy 468.613 / 506.309 22008.0 27.117599487304688 43 13 10 10 10 1.0229369582400216 57.2229230694125 0.0 3 0.9158855910536434 4.225079695773981 22008.0 40.20746262429594 0.0 - - - - - - - 750.7142857142857 44 7 CDC25B cell division cycle 25 homolog B (S. pombe) 2827 356 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9075.[MT7]-IIRNEQFAIR.3y9_2.heavy 468.613 / 573.823 28249.0 27.117599487304688 43 13 10 10 10 1.0229369582400216 57.2229230694125 0.0 3 0.9158855910536434 4.225079695773981 28249.0 18.058721461187215 0.0 - - - - - - - 328.0 56 4 CDC25B cell division cycle 25 homolog B (S. pombe) 2829 356 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9075.[MT7]-IIRNEQFAIR.3y5_1.heavy 468.613 / 634.367 12482.0 27.117599487304688 43 13 10 10 10 1.0229369582400216 57.2229230694125 0.0 3 0.9158855910536434 4.225079695773981 12482.0 36.47707762557078 1.0 - - - - - - - 328.0 24 6 CDC25B cell division cycle 25 homolog B (S. pombe) 2831 356 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9075.[MT7]-IIRNEQFAIR.3b8_2.heavy 468.613 / 558.818 12154.0 27.117599487304688 43 13 10 10 10 1.0229369582400216 57.2229230694125 0.0 3 0.9158855910536434 4.225079695773981 12154.0 54.62915506552326 0.0 - - - - - - - 328.0 24 1 CDC25B cell division cycle 25 homolog B (S. pombe) 2833 357 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A10691.[MT7]-EQGLTLPLYQSPVK[MT7].3b6_1.heavy 621.027 / 786.448 27073.0 34.332801818847656 47 17 10 10 10 7.017828212388471 14.249422609614673 0.0 3 0.9745902167651176 7.725702221088567 27073.0 26.09741152390994 0.0 - - - - - - - 263.0 54 1 BRCA2 breast cancer 2, early onset 2835 357 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A10691.[MT7]-EQGLTLPLYQSPVK[MT7].3b4_1.heavy 621.027 / 572.316 11828.0 34.332801818847656 47 17 10 10 10 7.017828212388471 14.249422609614673 0.0 3 0.9745902167651176 7.725702221088567 11828.0 6.569352776712444 1.0 - - - - - - - 736.4 59 5 BRCA2 breast cancer 2, early onset 2837 357 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A10691.[MT7]-EQGLTLPLYQSPVK[MT7].3b5_1.heavy 621.027 / 673.364 20502.0 34.332801818847656 47 17 10 10 10 7.017828212388471 14.249422609614673 0.0 3 0.9745902167651176 7.725702221088567 20502.0 25.581915400866922 2.0 - - - - - - - 263.0 42 6 BRCA2 breast cancer 2, early onset 2839 357 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A10691.[MT7]-EQGLTLPLYQSPVK[MT7].3y4_1.heavy 621.027 / 574.368 31804.0 34.332801818847656 47 17 10 10 10 7.017828212388471 14.249422609614673 0.0 3 0.9745902167651176 7.725702221088567 31804.0 88.00226964723078 0.0 - - - - - - - 263.0 63 3 BRCA2 breast cancer 2, early onset 2841 358 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9073.[MT7]-QVLGTK[MT7].2b3_1.heavy 467.302 / 485.32 18701.0 19.29800033569336 48 18 10 10 10 4.988866251851982 14.952217546207372 0.0 3 0.9824679607075159 9.306997496610753 18701.0 83.6816185943132 0.0 - - - - - - - 367.7142857142857 37 7 CDC34 cell division cycle 34 homolog (S. cerevisiae) 2843 358 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9073.[MT7]-QVLGTK[MT7].2y4_1.heavy 467.302 / 562.368 69661.0 19.29800033569336 48 18 10 10 10 4.988866251851982 14.952217546207372 0.0 3 0.9824679607075159 9.306997496610753 69661.0 90.13742016349272 0.0 - - - - - - - 234.0 139 2 CDC34 cell division cycle 34 homolog (S. cerevisiae) 2845 358 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9073.[MT7]-QVLGTK[MT7].2y5_1.heavy 467.302 / 661.437 73401.0 19.29800033569336 48 18 10 10 10 4.988866251851982 14.952217546207372 0.0 3 0.9824679607075159 9.306997496610753 73401.0 71.83092513368985 0.0 - - - - - - - 234.0 146 3 CDC34 cell division cycle 34 homolog (S. cerevisiae) 2847 358 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9073.[MT7]-QVLGTK[MT7].2b5_1.heavy 467.302 / 643.39 3974.0 19.29800033569336 48 18 10 10 10 4.988866251851982 14.952217546207372 0.0 3 0.9824679607075159 9.306997496610753 3974.0 5.006585408145661 3.0 - - - - - - - 351.0 36 6 CDC34 cell division cycle 34 homolog (S. cerevisiae) 2849 359 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A480.[MT7]-FLEETNC[CAM]LYAAEGQR.3y7_1.heavy 648.98 / 794.379 47456.0 32.60210037231445 46 16 10 10 10 3.4626048890993295 23.12552681600085 0.0 3 0.967183244588353 6.7939079880622035 47456.0 35.44773744618152 0.0 - - - - - - - 310.0 94 3 CUL4A cullin 4A 2851 359 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A480.[MT7]-FLEETNC[CAM]LYAAEGQR.3y6_1.heavy 648.98 / 631.316 50247.0 32.60210037231445 46 16 10 10 10 3.4626048890993295 23.12552681600085 0.0 3 0.967183244588353 6.7939079880622035 50247.0 43.087369439071566 0.0 - - - - - - - 861.8888888888889 100 9 CUL4A cullin 4A 2853 359 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A480.[MT7]-FLEETNC[CAM]LYAAEGQR.3b4_1.heavy 648.98 / 663.347 15819.0 32.60210037231445 46 16 10 10 10 3.4626048890993295 23.12552681600085 0.0 3 0.967183244588353 6.7939079880622035 15819.0 23.282518932627493 0.0 - - - - - - - 708.8571428571429 31 7 CUL4A cullin 4A 2855 359 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A480.[MT7]-FLEETNC[CAM]LYAAEGQR.3y5_1.heavy 648.98 / 560.279 35359.0 32.60210037231445 46 16 10 10 10 3.4626048890993295 23.12552681600085 0.0 3 0.967183244588353 6.7939079880622035 35359.0 36.18656392304411 0.0 - - - - - - - 310.0 70 2 CUL4A cullin 4A 2857 360 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9172.[MT7]-DRGEWDSLTPEAR.3y7_1.heavy 559.277 / 773.415 22645.0 26.830300331115723 37 12 10 5 10 1.0198949486436548 56.84255492146788 0.04400062561035156 3 0.8873254351825387 3.641536308925365 22645.0 24.899579625097836 0.0 - - - - - - - 323.0 45 6 UBE4A ubiquitination factor E4A (UFD2 homolog, yeast) 2859 360 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9172.[MT7]-DRGEWDSLTPEAR.3b6_1.heavy 559.277 / 903.408 12293.0 26.830300331115723 37 12 10 5 10 1.0198949486436548 56.84255492146788 0.04400062561035156 3 0.8873254351825387 3.641536308925365 12293.0 22.26503091624508 0.0 - - - - - - - 323.0 24 5 UBE4A ubiquitination factor E4A (UFD2 homolog, yeast) 2861 360 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9172.[MT7]-DRGEWDSLTPEAR.3b7_1.heavy 559.277 / 990.44 6146.0 26.830300331115723 37 12 10 5 10 1.0198949486436548 56.84255492146788 0.04400062561035156 3 0.8873254351825387 3.641536308925365 6146.0 11.56871529852789 1.0 - - - - - - - 323.0 16 3 UBE4A ubiquitination factor E4A (UFD2 homolog, yeast) 2863 360 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9172.[MT7]-DRGEWDSLTPEAR.3y5_1.heavy 559.277 / 573.299 29761.0 26.830300331115723 37 12 10 5 10 1.0198949486436548 56.84255492146788 0.04400062561035156 3 0.8873254351825387 3.641536308925365 29761.0 30.119173493761703 0.0 - - - - - - - 768.125 59 8 UBE4A ubiquitination factor E4A (UFD2 homolog, yeast) 2865 361 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9077.[MT7]-EVFAGK[MT7].2b3_1.heavy 469.781 / 520.289 38021.0 22.446500778198242 47 17 10 10 10 2.2221353846931784 31.516627094500947 0.0 3 0.9718595351557795 7.339610333917572 38021.0 47.65731208899993 0.0 - - - - - - - 266.0 76 6 PLK1 polo-like kinase 1 2867 361 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9077.[MT7]-EVFAGK[MT7].2y4_1.heavy 469.781 / 566.342 98375.0 22.446500778198242 47 17 10 10 10 2.2221353846931784 31.516627094500947 0.0 3 0.9718595351557795 7.339610333917572 98375.0 47.6134989857145 0.0 - - - - - - - 620.6666666666666 196 6 PLK1 polo-like kinase 1 2869 361 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9077.[MT7]-EVFAGK[MT7].2y5_1.heavy 469.781 / 665.41 78966.0 22.446500778198242 47 17 10 10 10 2.2221353846931784 31.516627094500947 0.0 3 0.9718595351557795 7.339610333917572 78966.0 130.9214101077519 0.0 - - - - - - - 266.0 157 3 PLK1 polo-like kinase 1 2871 361 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9077.[MT7]-EVFAGK[MT7].2b1_1.heavy 469.781 / 274.152 76573.0 22.446500778198242 47 17 10 10 10 2.2221353846931784 31.516627094500947 0.0 3 0.9718595351557795 7.339610333917572 76573.0 61.84620820295585 0.0 - - - - - - - 266.0 153 1 PLK1 polo-like kinase 1 2873 362 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A482.[MT7]-FLGDSANLSILSGGTPK[MT7].2b4_1.heavy 983.048 / 577.31 7261.0 36.1068000793457 42 17 10 5 10 3.179479626236598 31.45168762045673 0.0426025390625 3 0.9709187925723971 7.21934858124937 7261.0 9.702657856093978 0.0 - - - - - - - 340.5 14 4 CDC25C cell division cycle 25 homolog C (S. pombe) 2875 362 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A482.[MT7]-FLGDSANLSILSGGTPK[MT7].2b7_1.heavy 983.048 / 849.422 3404.0 36.1068000793457 42 17 10 5 10 3.179479626236598 31.45168762045673 0.0426025390625 3 0.9709187925723971 7.21934858124937 3404.0 12.4463436123348 0.0 - - - - - - - 264.8333333333333 6 12 CDC25C cell division cycle 25 homolog C (S. pombe) 2877 362 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A482.[MT7]-FLGDSANLSILSGGTPK[MT7].2b9_1.heavy 983.048 / 1049.54 1362.0 36.1068000793457 42 17 10 5 10 3.179479626236598 31.45168762045673 0.0426025390625 3 0.9709187925723971 7.21934858124937 1362.0 5.4 2.0 - - - - - - - 317.8 4 10 CDC25C cell division cycle 25 homolog C (S. pombe) 2879 362 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A482.[MT7]-FLGDSANLSILSGGTPK[MT7].2y7_1.heavy 983.048 / 803.474 4085.0 36.1068000793457 42 17 10 5 10 3.179479626236598 31.45168762045673 0.0426025390625 3 0.9709187925723971 7.21934858124937 4085.0 5.9131620413009465 0.0 - - - - - - - 363.2 8 5 CDC25C cell division cycle 25 homolog C (S. pombe) 2881 363 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9170.[MT7]-DIYQYLR.2b3_1.heavy 557.804 / 536.284 11853.0 32.70309829711914 46 16 10 10 10 5.259707960862404 19.012462430253173 0.0 3 0.9694584970438754 7.043776896153124 11853.0 21.84447115384615 0.0 - - - - - - - 811.2 23 5 CCNB2 cyclin B2 2883 363 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9170.[MT7]-DIYQYLR.2y5_1.heavy 557.804 / 742.388 30256.0 32.70309829711914 46 16 10 10 10 5.259707960862404 19.012462430253173 0.0 3 0.9694584970438754 7.043776896153124 30256.0 76.93299145299144 0.0 - - - - - - - 702.0 60 8 CCNB2 cyclin B2 2885 363 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9170.[MT7]-DIYQYLR.2b4_1.heavy 557.804 / 664.342 21834.0 32.70309829711914 46 16 10 10 10 5.259707960862404 19.012462430253173 0.0 3 0.9694584970438754 7.043776896153124 21834.0 34.531793045398985 0.0 - - - - - - - 312.0 43 1 CCNB2 cyclin B2 2887 363 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9170.[MT7]-DIYQYLR.2y6_1.heavy 557.804 / 855.472 27760.0 32.70309829711914 46 16 10 10 10 5.259707960862404 19.012462430253173 0.0 3 0.9694584970438754 7.043776896153124 27760.0 172.1653846153846 0.0 - - - - - - - 312.0 55 5 CCNB2 cyclin B2 2889 364 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A483.[MT7]-TFNLPLLMLGGGGYTIR.3b6_1.heavy 656.368 / 830.489 21922.0 46.90087413787842 39 13 10 6 10 2.85389861687293 27.663611325892077 0.034900665283203125 3 0.9200711123233379 4.335851649325141 21922.0 35.97484578710556 0.0 - - - - - - - 673.8571428571429 43 7 HDAC2 histone deacetylase 2 2891 364 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A483.[MT7]-TFNLPLLMLGGGGYTIR.3b4_1.heavy 656.368 / 620.352 31024.0 46.90087413787842 39 13 10 6 10 2.85389861687293 27.663611325892077 0.034900665283203125 3 0.9200711123233379 4.335851649325141 31024.0 176.28373802798794 0.0 - - - - - - - 686.2222222222222 62 9 HDAC2 histone deacetylase 2 2893 364 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A483.[MT7]-TFNLPLLMLGGGGYTIR.3b3_1.heavy 656.368 / 507.268 7241.0 46.90087413787842 39 13 10 6 10 2.85389861687293 27.663611325892077 0.034900665283203125 3 0.9200711123233379 4.335851649325141 7241.0 52.265864661654135 1.0 - - - - - - - 221.4 14 15 HDAC2 histone deacetylase 2 2895 364 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A483.[MT7]-TFNLPLLMLGGGGYTIR.3y8_1.heavy 656.368 / 780.4 47100.0 46.90087413787842 39 13 10 6 10 2.85389861687293 27.663611325892077 0.034900665283203125 3 0.9200711123233379 4.335851649325141 47100.0 107.68730895098356 0.0 - - - - - - - 654.7142857142857 94 7 HDAC2 histone deacetylase 2 2897 365 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A10665.[MT7]-LDLGR.2b3_1.heavy 359.222 / 486.304 2976.0 24.34830093383789 39 11 10 10 8 1.140919378938673 57.26074728966748 0.0 4 0.8643381194598658 3.312049317428626 2976.0 1.1858473355736918 2.0 - - - - - - - 298.0 5 4 BRCA2 breast cancer 2, early onset 2899 365 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A10665.[MT7]-LDLGR.2y4_1.heavy 359.222 / 460.251 27084.0 24.34830093383789 39 11 10 10 8 1.140919378938673 57.26074728966748 0.0 4 0.8643381194598658 3.312049317428626 27084.0 42.612564389697646 0.0 - - - - - - - 298.0 54 3 BRCA2 breast cancer 2, early onset 2901 365 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A10665.[MT7]-LDLGR.2b4_1.heavy 359.222 / 543.326 5655.0 24.34830093383789 39 11 10 10 8 1.140919378938673 57.26074728966748 0.0 4 0.8643381194598658 3.312049317428626 5655.0 9.912609182530796 1.0 - - - - - - - 298.0 48 2 BRCA2 breast cancer 2, early onset 2903 365 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A10665.[MT7]-LDLGR.2b2_1.heavy 359.222 / 373.22 8333.0 24.34830093383789 39 11 10 10 8 1.140919378938673 57.26074728966748 0.0 4 0.8643381194598658 3.312049317428626 8333.0 34.87056475796087 0.0 - - - - - - - 298.0 16 1 BRCA2 breast cancer 2, early onset 2905 366 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9005.[MT7]-QALGER.2b3_1.heavy 409.236 / 457.289 11443.0 16.072200775146484 44 16 10 10 8 2.280830529131216 33.60621316786822 0.0 4 0.9693707070949972 7.033623143448937 11443.0 41.436585173356825 0.0 - - - - - - - 286.0 22 8 UBR5;LOC730429 ubiquitin protein ligase E3 component n-recognin 5;e3 ubiquitin-protein ligase UBR5-like 2907 366 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9005.[MT7]-QALGER.2y5_1.heavy 409.236 / 545.304 45580.0 16.072200775146484 44 16 10 10 8 2.280830529131216 33.60621316786822 0.0 4 0.9693707070949972 7.033623143448937 45580.0 50.96857843790461 0.0 - - - - - - - 381.0 91 2 UBR5;LOC730429 ubiquitin protein ligase E3 component n-recognin 5;e3 ubiquitin-protein ligase UBR5-like 2909 366 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9005.[MT7]-QALGER.2b4_1.heavy 409.236 / 514.311 4577.0 16.072200775146484 44 16 10 10 8 2.280830529131216 33.60621316786822 0.0 4 0.9693707070949972 7.033623143448937 4577.0 10.100560487538157 2.0 - - - - - - - 326.7142857142857 12 7 UBR5;LOC730429 ubiquitin protein ligase E3 component n-recognin 5;e3 ubiquitin-protein ligase UBR5-like 2911 366 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9005.[MT7]-QALGER.2b5_1.heavy 409.236 / 643.353 16973.0 16.072200775146484 44 16 10 10 8 2.280830529131216 33.60621316786822 0.0 4 0.9693707070949972 7.033623143448937 16973.0 14.127617591914785 2.0 - - - - - - - 286.0 59 4 UBR5;LOC730429 ubiquitin protein ligase E3 component n-recognin 5;e3 ubiquitin-protein ligase UBR5-like 2913 367 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9629.[MT7]-GLLLR.2y4_1.heavy 358.251 / 514.371 17000.0 28.180200576782227 42 12 10 10 10 2.015714273011996 49.610205840619585 0.0 3 0.882134848891699 3.5588418482382758 17000.0 100.06006006006007 0.0 - - - - - - - 333.0 34 2 SIRT2;ZFR2;SIRT3;DMGDH;SLC6A17;PARD6A;ZFR;POLE2;ACD;SEMA3B;CEP350 sirtuin 2;zinc finger RNA binding protein 2;sirtuin 3;dimethylglycine dehydrogenase;solute carrier family 6, member 17;par-6 partitioning defective 6 homolog alpha (C. elegans);zinc finger RNA binding protein;polymerase (DNA directed), epsilon 2 (p59 subunit);adrenocortical dysplasia homolog (mouse);sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B;centrosomal protein 350kDa 2915 367 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9629.[MT7]-GLLLR.2b3_1.heavy 358.251 / 428.299 19667.0 28.180200576782227 42 12 10 10 10 2.015714273011996 49.610205840619585 0.0 3 0.882134848891699 3.5588418482382758 19667.0 81.4630372651512 0.0 - - - - - - - 333.0 39 2 SIRT2;ZFR2;SIRT3;DMGDH;SLC6A17;PARD6A;ZFR;POLE2;ACD;SEMA3B;CEP350 sirtuin 2;zinc finger RNA binding protein 2;sirtuin 3;dimethylglycine dehydrogenase;solute carrier family 6, member 17;par-6 partitioning defective 6 homolog alpha (C. elegans);zinc finger RNA binding protein;polymerase (DNA directed), epsilon 2 (p59 subunit);adrenocortical dysplasia homolog (mouse);sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B;centrosomal protein 350kDa 2917 367 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9629.[MT7]-GLLLR.2b4_1.heavy 358.251 / 541.383 16000.0 28.180200576782227 42 12 10 10 10 2.015714273011996 49.610205840619585 0.0 3 0.882134848891699 3.5588418482382758 16000.0 26.042178910544724 0.0 - - - - - - - 333.0 32 4 SIRT2;ZFR2;SIRT3;DMGDH;SLC6A17;PARD6A;ZFR;POLE2;ACD;SEMA3B;CEP350 sirtuin 2;zinc finger RNA binding protein 2;sirtuin 3;dimethylglycine dehydrogenase;solute carrier family 6, member 17;par-6 partitioning defective 6 homolog alpha (C. elegans);zinc finger RNA binding protein;polymerase (DNA directed), epsilon 2 (p59 subunit);adrenocortical dysplasia homolog (mouse);sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B;centrosomal protein 350kDa 2919 367 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9629.[MT7]-GLLLR.2b2_1.heavy 358.251 / 315.215 19000.0 28.180200576782227 42 12 10 10 10 2.015714273011996 49.610205840619585 0.0 3 0.882134848891699 3.5588418482382758 19000.0 71.68306306306306 0.0 - - - - - - - 333.0 38 6 SIRT2;ZFR2;SIRT3;DMGDH;SLC6A17;PARD6A;ZFR;POLE2;ACD;SEMA3B;CEP350 sirtuin 2;zinc finger RNA binding protein 2;sirtuin 3;dimethylglycine dehydrogenase;solute carrier family 6, member 17;par-6 partitioning defective 6 homolog alpha (C. elegans);zinc finger RNA binding protein;polymerase (DNA directed), epsilon 2 (p59 subunit);adrenocortical dysplasia homolog (mouse);sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B;centrosomal protein 350kDa 2921 368 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9006.[MT7]-GVQSQR.2y4_1.heavy 409.734 / 518.268 12276.0 12.80162501335144 45 17 10 8 10 2.539706381852862 31.580710083264314 0.018700599670410156 3 0.9708478046028002 7.210510256869934 12276.0 11.803846153846152 0.0 - - - - - - - 285.25714285714287 24 35 SHC4 SHC (Src homology 2 domain containing) family, member 4 2923 368 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9006.[MT7]-GVQSQR.2b3_1.heavy 409.734 / 429.258 13039.0 12.80162501335144 45 17 10 8 10 2.539706381852862 31.580710083264314 0.018700599670410156 3 0.9708478046028002 7.210510256869934 13039.0 34.50820664674933 0.0 - - - - - - - 196.7027027027027 26 37 SHC4 SHC (Src homology 2 domain containing) family, member 4 2925 368 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9006.[MT7]-GVQSQR.2y5_1.heavy 409.734 / 617.337 13733.0 12.80162501335144 45 17 10 8 10 2.539706381852862 31.580710083264314 0.018700599670410156 3 0.9708478046028002 7.210510256869934 13733.0 7.922884615384615 0.0 - - - - - - - 218.33333333333334 27 27 SHC4 SHC (Src homology 2 domain containing) family, member 4 2927 368 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9006.[MT7]-GVQSQR.2b5_1.heavy 409.734 / 644.348 7283.0 12.80162501335144 45 17 10 8 10 2.539706381852862 31.580710083264314 0.018700599670410156 3 0.9708478046028002 7.210510256869934 7283.0 11.543659942363114 3.0 - - - - - - - 687.4545454545455 14 11 SHC4 SHC (Src homology 2 domain containing) family, member 4 2929 369 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9007.[MT7]-LVATK[MT7].2b3_1.heavy 410.281 / 428.299 17418.0 20.117549896240234 25 12 2 5 6 0.9067689387205556 73.78732481321289 0.041698455810546875 6 0.8847780481237513 3.6002589556858537 17418.0 33.44530501694252 0.0 - - - - - - - 441.8 34 5 POLA2;KIAA0649 polymerase (DNA directed), alpha 2 (70kD subunit);KIAA0649 2931 369 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9007.[MT7]-LVATK[MT7].2y4_1.heavy 410.281 / 562.368 100092.0 20.117549896240234 25 12 2 5 6 0.9067689387205556 73.78732481321289 0.041698455810546875 6 0.8847780481237513 3.6002589556858537 100092.0 36.317505553036405 1.0 - - - - - - - 327.0 498 3 POLA2;KIAA0649 polymerase (DNA directed), alpha 2 (70kD subunit);KIAA0649 2933 369 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9007.[MT7]-LVATK[MT7].2y3_1.heavy 410.281 / 463.3 94695.0 20.117549896240234 25 12 2 5 6 0.9067689387205556 73.78732481321289 0.041698455810546875 6 0.8847780481237513 3.6002589556858537 94695.0 63.517946434872364 0.0 - - - - - - - 368.0 189 2 POLA2;KIAA0649 polymerase (DNA directed), alpha 2 (70kD subunit);KIAA0649 2935 369 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9007.[MT7]-LVATK[MT7].2y1_1.heavy 410.281 / 291.215 25759.0 20.117549896240234 25 12 2 5 6 0.9067689387205556 73.78732481321289 0.041698455810546875 6 0.8847780481237513 3.6002589556858537 25759.0 5.247483293642063 5.0 - - - - - - - 2821.5 92 2 POLA2;KIAA0649 polymerase (DNA directed), alpha 2 (70kD subunit);KIAA0649 2937 370 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9000.[MT7]-GLSSAAR.2y5_1.heavy 403.236 / 491.257 21903.0 16.58370018005371 34 14 4 10 6 2.921480808727231 34.22921680720056 0.0 5 0.9461940618979513 5.296396197628993 21903.0 35.83818633747816 0.0 - - - - - - - 296.0 43 4 SHC3 SHC (Src homology 2 domain containing) transforming protein 3 2939 370 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9000.[MT7]-GLSSAAR.2b4_1.heavy 403.236 / 489.279 7696.0 16.58370018005371 34 14 4 10 6 2.921480808727231 34.22921680720056 0.0 5 0.9461940618979513 5.296396197628993 7696.0 7.694550063371356 3.0 - - - - - - - 296.0 23 4 SHC3 SHC (Src homology 2 domain containing) transforming protein 3 2941 370 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9000.[MT7]-GLSSAAR.2y6_1.heavy 403.236 / 604.341 20719.0 16.58370018005371 34 14 4 10 6 2.921480808727231 34.22921680720056 0.0 5 0.9461940618979513 5.296396197628993 20719.0 22.14706654631842 0.0 - - - - - - - 296.0 41 4 SHC3 SHC (Src homology 2 domain containing) transforming protein 3 2943 370 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9000.[MT7]-GLSSAAR.2b5_1.heavy 403.236 / 560.316 19930.0 16.58370018005371 34 14 4 10 6 2.921480808727231 34.22921680720056 0.0 5 0.9461940618979513 5.296396197628993 19930.0 20.19454907034694 2.0 - - - - - - - 246.5 74 8 SHC3 SHC (Src homology 2 domain containing) transforming protein 3 2945 371 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9140.[MT7]-ILDFGLAR.2y5_1.heavy 524.817 / 563.33 154419.0 36.962799072265625 50 20 10 10 10 10.345059540231142 9.66644992337721 0.0 3 0.9953688742883259 18.12806026183977 154419.0 731.418718262679 0.0 - - - - - - - 254.6 308 5 LOC100509672;LOC100509694;MAPK14;MAPK8;MAPK11;MAPK9;MAPK10;MAPK13;MAPK12 mitogen-activated protein kinase 12-like;mitogen-activated protein kinase 12-like;mitogen-activated protein kinase 14;mitogen-activated protein kinase 8;mitogen-activated protein kinase 11;mitogen-activated protein kinase 9;mitogen-activated protein kinase 10;mitogen-activated protein kinase 13;mitogen-activated protein kinase 12 2947 371 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9140.[MT7]-ILDFGLAR.2y6_1.heavy 524.817 / 678.357 48428.0 36.962799072265625 50 20 10 10 10 10.345059540231142 9.66644992337721 0.0 3 0.9953688742883259 18.12806026183977 48428.0 120.79156716517116 0.0 - - - - - - - 377.6666666666667 96 9 LOC100509672;LOC100509694;MAPK14;MAPK8;MAPK11;MAPK9;MAPK10;MAPK13;MAPK12 mitogen-activated protein kinase 12-like;mitogen-activated protein kinase 12-like;mitogen-activated protein kinase 14;mitogen-activated protein kinase 8;mitogen-activated protein kinase 11;mitogen-activated protein kinase 9;mitogen-activated protein kinase 10;mitogen-activated protein kinase 13;mitogen-activated protein kinase 12 2949 371 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9140.[MT7]-ILDFGLAR.2b5_1.heavy 524.817 / 690.394 25913.0 36.962799072265625 50 20 10 10 10 10.345059540231142 9.66644992337721 0.0 3 0.9953688742883259 18.12806026183977 25913.0 76.83878108781974 0.0 - - - - - - - 318.5 51 6 LOC100509672;LOC100509694;MAPK14;MAPK8;MAPK11;MAPK9;MAPK10;MAPK13;MAPK12 mitogen-activated protein kinase 12-like;mitogen-activated protein kinase 12-like;mitogen-activated protein kinase 14;mitogen-activated protein kinase 8;mitogen-activated protein kinase 11;mitogen-activated protein kinase 9;mitogen-activated protein kinase 10;mitogen-activated protein kinase 13;mitogen-activated protein kinase 12 2951 371 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9140.[MT7]-ILDFGLAR.2y7_1.heavy 524.817 / 791.441 103654.0 36.962799072265625 50 20 10 10 10 10.345059540231142 9.66644992337721 0.0 3 0.9953688742883259 18.12806026183977 103654.0 270.74167588346074 0.0 - - - - - - - 382.4 207 5 LOC100509672;LOC100509694;MAPK14;MAPK8;MAPK11;MAPK9;MAPK10;MAPK13;MAPK12 mitogen-activated protein kinase 12-like;mitogen-activated protein kinase 12-like;mitogen-activated protein kinase 14;mitogen-activated protein kinase 8;mitogen-activated protein kinase 11;mitogen-activated protein kinase 9;mitogen-activated protein kinase 10;mitogen-activated protein kinase 13;mitogen-activated protein kinase 12 2953 372 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9001.[MT7]-ASEEAR.2b3_1.heavy 403.71 / 432.221 8902.0 12.42020034790039 42 14 10 10 8 2.304322921572249 43.39669543007001 0.0 4 0.9417991598606903 5.090594940325289 8902.0 6.269014084507041 0.0 - - - - - - - 680.2857142857143 17 7 AIRE autoimmune regulator 2955 372 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9001.[MT7]-ASEEAR.2y5_1.heavy 403.71 / 591.273 18031.0 12.42020034790039 42 14 10 10 8 2.304322921572249 43.39669543007001 0.0 4 0.9417991598606903 5.090594940325289 18031.0 25.117230984348453 1.0 - - - - - - - 221.93478260869566 69 46 AIRE autoimmune regulator 2957 372 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9001.[MT7]-ASEEAR.2b4_1.heavy 403.71 / 561.264 36516.0 12.42020034790039 42 14 10 10 8 2.304322921572249 43.39669543007001 0.0 4 0.9417991598606903 5.090594940325289 36516.0 87.75306675703152 0.0 - - - - - - - 650.2941176470588 73 17 AIRE autoimmune regulator 2959 372 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9001.[MT7]-ASEEAR.2b5_1.heavy 403.71 / 632.301 5840.0 12.42020034790039 42 14 10 10 8 2.304322921572249 43.39669543007001 0.0 4 0.9417991598606903 5.090594940325289 5840.0 11.837991127271597 1.0 - - - - - - - 712.3125 11 16 AIRE autoimmune regulator 2961 373 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9141.[MT7]-TVGSTSTPR.2y8_1.heavy 525.289 / 804.421 17350.0 15.621600151062012 36 16 2 10 8 3.1485528590711516 23.91660096742305 0.0 4 0.9624594946834973 6.3495687197727255 17350.0 45.74954379562044 1.0 - - - - - - - 243.66666666666666 86 9 PKMYT1 protein kinase, membrane associated tyrosine/threonine 1 2963 373 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9141.[MT7]-TVGSTSTPR.2y5_1.heavy 525.289 / 561.299 2922.0 15.621600151062012 36 16 2 10 8 3.1485528590711516 23.91660096742305 0.0 4 0.9624594946834973 6.3495687197727255 2922.0 4.5775033383846715 1.0 - - - - - - - 313.0 5 7 PKMYT1 protein kinase, membrane associated tyrosine/threonine 1 2965 373 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9141.[MT7]-TVGSTSTPR.2y6_1.heavy 525.289 / 648.331 2739.0 15.621600151062012 36 16 2 10 8 3.1485528590711516 23.91660096742305 0.0 4 0.9624594946834973 6.3495687197727255 2739.0 5.815813338584006 2.0 - - - - - - - 296.75 5 8 PKMYT1 protein kinase, membrane associated tyrosine/threonine 1 2967 373 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9141.[MT7]-TVGSTSTPR.2y7_1.heavy 525.289 / 705.353 10958.0 15.621600151062012 36 16 2 10 8 3.1485528590711516 23.91660096742305 0.0 4 0.9624594946834973 6.3495687197727255 10958.0 39.61250364484756 0.0 - - - - - - - 304.3333333333333 21 6 PKMYT1 protein kinase, membrane associated tyrosine/threonine 1 2969 374 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9003.[MT7]-DASTK[MT7].2b3_1.heavy 405.234 / 418.205 3623.0 12.173999786376953 48 20 10 10 8 12.563402103655994 7.9596274301289505 0.0 4 0.9955135072668952 18.418165883356924 3623.0 -2.648836588501171 1.0 - - - - - - - 224.35294117647058 9 51 PIK3R1;PIK3R3;ZMYM5 phosphoinositide-3-kinase, regulatory subunit 1 (alpha);phosphoinositide-3-kinase, regulatory subunit 3 (gamma);zinc finger, MYM-type 5 2971 374 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9003.[MT7]-DASTK[MT7].2y4_1.heavy 405.234 / 550.332 19666.0 12.173999786376953 48 20 10 10 8 12.563402103655994 7.9596274301289505 0.0 4 0.9955135072668952 18.418165883356924 19666.0 27.017800097340828 0.0 - - - - - - - 203.27777777777777 39 54 PIK3R1;PIK3R3;ZMYM5 phosphoinositide-3-kinase, regulatory subunit 1 (alpha);phosphoinositide-3-kinase, regulatory subunit 3 (gamma);zinc finger, MYM-type 5 2973 374 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9003.[MT7]-DASTK[MT7].2b4_1.heavy 405.234 / 519.253 1035.0 12.173999786376953 48 20 10 10 8 12.563402103655994 7.9596274301289505 0.0 4 0.9955135072668952 18.418165883356924 1035.0 -1.5381177496430922 25.0 - - - - - - - 1229.0 4 8 PIK3R1;PIK3R3;ZMYM5 phosphoinositide-3-kinase, regulatory subunit 1 (alpha);phosphoinositide-3-kinase, regulatory subunit 3 (gamma);zinc finger, MYM-type 5 2975 374 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9003.[MT7]-DASTK[MT7].2y3_1.heavy 405.234 / 479.295 8694.0 12.173999786376953 48 20 10 10 8 12.563402103655994 7.9596274301289505 0.0 4 0.9955135072668952 18.418165883356924 8694.0 19.855887521968366 0.0 - - - - - - - 173.77777777777777 17 45 PIK3R1;PIK3R3;ZMYM5 phosphoinositide-3-kinase, regulatory subunit 1 (alpha);phosphoinositide-3-kinase, regulatory subunit 3 (gamma);zinc finger, MYM-type 5 2977 375 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9143.[MT7]-FVIVDC[CAM]R.2b3_1.heavy 526.788 / 504.33 29333.0 29.466800689697266 43 13 10 10 10 1.533656925785263 43.77046102897983 0.0 3 0.9221848330795466 4.395142470346523 29333.0 11.962921439720573 0.0 - - - - - - - 1249.75 58 4 CDC25B cell division cycle 25 homolog B (S. pombe) 2979 375 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9143.[MT7]-FVIVDC[CAM]R.2y5_1.heavy 526.788 / 662.329 32000.0 29.466800689697266 43 13 10 10 10 1.533656925785263 43.77046102897983 0.0 3 0.9221848330795466 4.395142470346523 32000.0 31.498866215719016 1.0 - - - - - - - 333.0 70 4 CDC25B cell division cycle 25 homolog B (S. pombe) 2981 375 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9143.[MT7]-FVIVDC[CAM]R.2y6_1.heavy 526.788 / 761.397 54667.0 29.466800689697266 43 13 10 10 10 1.533656925785263 43.77046102897983 0.0 3 0.9221848330795466 4.395142470346523 54667.0 192.8651277233723 0.0 - - - - - - - 333.0 109 3 CDC25B cell division cycle 25 homolog B (S. pombe) 2983 375 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9143.[MT7]-FVIVDC[CAM]R.2b5_1.heavy 526.788 / 718.426 64000.0 29.466800689697266 43 13 10 10 10 1.533656925785263 43.77046102897983 0.0 3 0.9221848330795466 4.395142470346523 64000.0 126.4762219969799 0.0 - - - - - - - 333.0 128 1 CDC25B cell division cycle 25 homolog B (S. pombe) 2985 376 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9145.[MT7]-GDGLEFK[MT7].2y5_1.heavy 527.295 / 737.431 N/A N/A - - - - - - - - - 0.0 - - - - - - - CHEK1 CHK1 checkpoint homolog (S. pombe) 2987 376 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9145.[MT7]-GDGLEFK[MT7].2y3_1.heavy 527.295 / 567.326 N/A N/A - - - - - - - - - 0.0 - - - - - - - CHEK1 CHK1 checkpoint homolog (S. pombe) 2989 376 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9145.[MT7]-GDGLEFK[MT7].2b5_1.heavy 527.295 / 616.306 N/A N/A - - - - - - - - - 0.0 - - - - - - - CHEK1 CHK1 checkpoint homolog (S. pombe) 2991 376 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9145.[MT7]-GDGLEFK[MT7].2y1_1.heavy 527.295 / 291.215 N/A N/A - - - - - - - - - 0.0 - - - - - - - CHEK1 CHK1 checkpoint homolog (S. pombe) 2993 377 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9146.[MT7]-DDDFEK[MT7].2y4_1.heavy 528.758 / 682.353 16106.0 20.22170066833496 50 20 10 10 10 8.325714446741005 12.010981236468387 0.0 3 0.9929984361576564 14.740462906251908 16106.0 10.473300546448087 0.0 - - - - - - - 366.0 32 12 MAP2K1 mitogen-activated protein kinase kinase 1 2995 377 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9146.[MT7]-DDDFEK[MT7].2y5_1.heavy 528.758 / 797.38 13422.0 20.22170066833496 50 20 10 10 10 8.325714446741005 12.010981236468387 0.0 3 0.9929984361576564 14.740462906251908 13422.0 32.63819672131147 0.0 - - - - - - - 406.6666666666667 26 9 MAP2K1 mitogen-activated protein kinase kinase 1 2997 377 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9146.[MT7]-DDDFEK[MT7].2b4_1.heavy 528.758 / 637.259 9273.0 20.22170066833496 50 20 10 10 10 8.325714446741005 12.010981236468387 0.0 3 0.9929984361576564 14.740462906251908 9273.0 31.73342213114754 0.0 - - - - - - - 325.3333333333333 18 6 MAP2K1 mitogen-activated protein kinase kinase 1 2999 377 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9146.[MT7]-DDDFEK[MT7].2y3_1.heavy 528.758 / 567.326 44170.0 20.22170066833496 50 20 10 10 10 8.325714446741005 12.010981236468387 0.0 3 0.9929984361576564 14.740462906251908 44170.0 27.415040968819422 0.0 - - - - - - - 366.0 88 2 MAP2K1 mitogen-activated protein kinase kinase 1 3001 378 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9149.[MT7]-EVPAQDLR.2y5_1.heavy 536.299 / 602.326 2564.0 21.418550491333008 44 18 10 6 10 3.330254100763249 30.02773871731931 0.03820037841796875 3 0.9872569089002505 10.921007534704417 2564.0 5.33993010403121 4.0 - - - - - - - 586.1428571428571 9 7 CDC7 cell division cycle 7 homolog (S. cerevisiae) 3003 378 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9149.[MT7]-EVPAQDLR.2b6_1.heavy 536.299 / 784.396 11536.0 21.418550491333008 44 18 10 6 10 3.330254100763249 30.02773871731931 0.03820037841796875 3 0.9872569089002505 10.921007534704417 11536.0 42.46074512195122 0.0 - - - - - - - 256.0 23 6 CDC7 cell division cycle 7 homolog (S. cerevisiae) 3005 378 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9149.[MT7]-EVPAQDLR.2y6_1.heavy 536.299 / 699.378 32300.0 21.418550491333008 44 18 10 6 10 3.330254100763249 30.02773871731931 0.03820037841796875 3 0.9872569089002505 10.921007534704417 32300.0 73.09476989438295 0.0 - - - - - - - 256.0 64 4 CDC7 cell division cycle 7 homolog (S. cerevisiae) 3007 378 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9149.[MT7]-EVPAQDLR.2y7_1.heavy 536.299 / 798.447 12561.0 21.418550491333008 44 18 10 6 10 3.330254100763249 30.02773871731931 0.03820037841796875 3 0.9872569089002505 10.921007534704417 12561.0 44.80824561403509 0.0 - - - - - - - 541.4444444444445 25 9 CDC7 cell division cycle 7 homolog (S. cerevisiae) 3009 379 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9009.[MT7]-DVSLPR.2b3_1.heavy 415.746 / 446.237 15165.0 22.944599151611328 47 17 10 10 10 6.2957304018980045 15.883780533209062 0.0 3 0.9794702033125577 8.598530478180802 15165.0 8.955826150090756 1.0 - - - - - - - 271.0 31 4 CDK4 cyclin-dependent kinase 4 3011 379 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9009.[MT7]-DVSLPR.2y4_1.heavy 415.746 / 472.288 25184.0 22.944599151611328 47 17 10 10 10 6.2957304018980045 15.883780533209062 0.0 3 0.9794702033125577 8.598530478180802 25184.0 33.14324026059007 0.0 - - - - - - - 271.0 50 4 CDK4 cyclin-dependent kinase 4 3013 379 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9009.[MT7]-DVSLPR.2y5_1.heavy 415.746 / 571.356 41162.0 22.944599151611328 47 17 10 10 10 6.2957304018980045 15.883780533209062 0.0 3 0.9794702033125577 8.598530478180802 41162.0 27.70339157613946 0.0 - - - - - - - 271.0 82 2 CDK4 cyclin-dependent kinase 4 3015 379 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9009.[MT7]-DVSLPR.2b4_1.heavy 415.746 / 559.321 14082.0 22.944599151611328 47 17 10 10 10 6.2957304018980045 15.883780533209062 0.0 3 0.9794702033125577 8.598530478180802 14082.0 26.027358589630207 1.0 - - - - - - - 271.0 28 2 CDK4 cyclin-dependent kinase 4 3017 380 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9017.[MT7]-LDADK[MT7].2y4_1.heavy 425.25 / 592.306 494686.0 27.072999954223633 44 14 10 10 10 0.9233462248781884 68.48457572071267 0.0 3 0.9358607069561363 4.846756690522926 494686.0 234.48263635795018 0.0 - - - - - - - 328.0 989 1 CHEK1;ADI1 CHK1 checkpoint homolog (S. pombe);acireductone dioxygenase 1 3019 380 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9017.[MT7]-LDADK[MT7].2b4_1.heavy 425.25 / 559.284 25259.0 27.072999954223633 44 14 10 10 10 0.9233462248781884 68.48457572071267 0.0 3 0.9358607069561363 4.846756690522926 25259.0 30.1619156504065 1.0 - - - - - - - 328.0 51 4 CHEK1;ADI1 CHK1 checkpoint homolog (S. pombe);acireductone dioxygenase 1 3021 380 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9017.[MT7]-LDADK[MT7].2y3_1.heavy 425.25 / 477.279 792976.0 27.072999954223633 44 14 10 10 10 0.9233462248781884 68.48457572071267 0.0 3 0.9358607069561363 4.846756690522926 792976.0 490.5693466091272 0.0 - - - - - - - 328.0 1585 5 CHEK1;ADI1 CHK1 checkpoint homolog (S. pombe);acireductone dioxygenase 1 3023 380 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9017.[MT7]-LDADK[MT7].2y1_1.heavy 425.25 / 291.215 168941.0 27.072999954223633 44 14 10 10 10 0.9233462248781884 68.48457572071267 0.0 3 0.9358607069561363 4.846756690522926 168941.0 27.038338832332037 0.0 - - - - - - - 984.0 337 2 CHEK1;ADI1 CHK1 checkpoint homolog (S. pombe);acireductone dioxygenase 1 3025 381 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9018.[MT7]-LSAIFR.2y4_1.heavy 425.767 / 506.309 8739.0 33.21030044555664 47 17 10 10 10 2.4597615233594254 40.65434760660243 0.0 3 0.9710521212680293 7.236036251702754 8739.0 25.929900332225916 1.0 - - - - - - - 301.0 17 1 PAK1 p21 protein (Cdc42/Rac)-activated kinase 1 3027 381 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9018.[MT7]-LSAIFR.2y5_1.heavy 425.767 / 593.341 77140.0 33.21030044555664 47 17 10 10 10 2.4597615233594254 40.65434760660243 0.0 3 0.9710521212680293 7.236036251702754 77140.0 130.54755110369896 0.0 - - - - - - - 301.0 154 1 PAK1 p21 protein (Cdc42/Rac)-activated kinase 1 3029 381 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9018.[MT7]-LSAIFR.2b4_1.heavy 425.767 / 529.347 22901.0 33.21030044555664 47 17 10 10 10 2.4597615233594254 40.65434760660243 0.0 3 0.9710521212680293 7.236036251702754 22901.0 55.84312162562017 0.0 - - - - - - - 723.4 45 5 PAK1 p21 protein (Cdc42/Rac)-activated kinase 1 3031 381 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9018.[MT7]-LSAIFR.2y1_1.heavy 425.767 / 175.119 28024.0 33.21030044555664 47 17 10 10 10 2.4597615233594254 40.65434760660243 0.0 3 0.9710521212680293 7.236036251702754 28024.0 34.28201834862385 0.0 - - - - - - - 301.0 56 2 PAK1 p21 protein (Cdc42/Rac)-activated kinase 1 3033 382 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9013.[MT7]-ILFPGR.2b3_1.heavy 423.77 / 518.346 9667.0 30.644800186157227 36 17 8 3 8 1.8316149815940268 41.630917698530325 0.051601409912109375 4 0.9776118526887843 8.232650740241679 9667.0 40.91188639914277 0.0 - - - - - - - 333.0 19 3 MAPK8;MAPK10 mitogen-activated protein kinase 8;mitogen-activated protein kinase 10 3035 382 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9013.[MT7]-ILFPGR.2y4_1.heavy 423.77 / 476.262 18667.0 30.644800186157227 36 17 8 3 8 1.8316149815940268 41.630917698530325 0.051601409912109375 4 0.9776118526887843 8.232650740241679 18667.0 105.94783783783784 1.0 - - - - - - - 333.0 120 3 MAPK8;MAPK10 mitogen-activated protein kinase 8;mitogen-activated protein kinase 10 3037 382 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9013.[MT7]-ILFPGR.2y5_1.heavy 423.77 / 589.346 47333.0 30.644800186157227 36 17 8 3 8 1.8316149815940268 41.630917698530325 0.051601409912109375 4 0.9776118526887843 8.232650740241679 47333.0 63.9684641503562 2.0 - - - - - - - 333.0 94 5 MAPK8;MAPK10 mitogen-activated protein kinase 8;mitogen-activated protein kinase 10 3039 382 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9013.[MT7]-ILFPGR.2y3_1.heavy 423.77 / 329.193 10000.0 30.644800186157227 36 17 8 3 8 1.8316149815940268 41.630917698530325 0.051601409912109375 4 0.9776118526887843 8.232650740241679 10000.0 11.28204029147021 0.0 - - - - - - - 667.0 20 3 MAPK8;MAPK10 mitogen-activated protein kinase 8;mitogen-activated protein kinase 10 3041 383 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9150.[MT7]-ALDLLDK[MT7].2y4_1.heavy 538.334 / 632.41 77399.0 31.83049964904785 50 20 10 10 10 15.185252800000669 6.585336531242707 0.0 3 0.9945811416981745 16.757613216959356 77399.0 92.09108043754028 0.0 - - - - - - - 324.0 154 1 MAPK1 mitogen-activated protein kinase 1 3043 383 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9150.[MT7]-ALDLLDK[MT7].2y5_1.heavy 538.334 / 747.437 39833.0 31.83049964904785 50 20 10 10 10 15.185252800000669 6.585336531242707 0.0 3 0.9945811416981745 16.757613216959356 39833.0 141.15095509345045 0.0 - - - - - - - 324.0 79 4 MAPK1 mitogen-activated protein kinase 1 3045 383 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9150.[MT7]-ALDLLDK[MT7].2y3_1.heavy 538.334 / 519.326 55054.0 31.83049964904785 50 20 10 10 10 15.185252800000669 6.585336531242707 0.0 3 0.9945811416981745 16.757613216959356 55054.0 55.263281714182384 0.0 - - - - - - - 324.0 110 2 MAPK1 mitogen-activated protein kinase 1 3047 383 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9150.[MT7]-ALDLLDK[MT7].2y6_1.heavy 538.334 / 860.521 43395.0 31.83049964904785 50 20 10 10 10 15.185252800000669 6.585336531242707 0.0 3 0.9945811416981745 16.757613216959356 43395.0 159.13055269599434 0.0 - - - - - - - 324.0 86 1 MAPK1 mitogen-activated protein kinase 1 3049 384 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9151.[MT7]-YNLIVVGR.2b3_1.heavy 539.331 / 535.3 6333.0 31.235200881958008 44 14 10 10 10 2.159317863227757 36.80395281892793 0.0 3 0.9434682425645428 5.165931374828979 6333.0 34.99315315315316 2.0 - - - - - - - 333.0 12 4 DDB2 damage-specific DNA binding protein 2, 48kDa 3051 384 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9151.[MT7]-YNLIVVGR.2y5_1.heavy 539.331 / 543.361 9667.0 31.235200881958008 44 14 10 10 10 2.159317863227757 36.80395281892793 0.0 3 0.9434682425645428 5.165931374828979 9667.0 13.916708927231808 0.0 - - - - - - - 333.0 19 4 DDB2 damage-specific DNA binding protein 2, 48kDa 3053 384 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9151.[MT7]-YNLIVVGR.2y6_1.heavy 539.331 / 656.445 3667.0 31.235200881958008 44 14 10 10 10 2.159317863227757 36.80395281892793 0.0 3 0.9434682425645428 5.165931374828979 3667.0 4.971622091727389 1.0 - - - - - - - 333.0 7 3 DDB2 damage-specific DNA binding protein 2, 48kDa 3055 384 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9151.[MT7]-YNLIVVGR.2y7_1.heavy 539.331 / 770.488 13000.0 31.235200881958008 44 14 10 10 10 2.159317863227757 36.80395281892793 0.0 3 0.9434682425645428 5.165931374828979 13000.0 27.093792635775692 0.0 - - - - - - - 333.0 26 6 DDB2 damage-specific DNA binding protein 2, 48kDa 3057 385 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9156.[MT7]-ALLLELK[MT7].2y4_1.heavy 544.37 / 646.426 183510.0 36.429100036621094 50 20 10 10 10 10.264594989617438 9.742225592061768 0.0 3 0.9912972834328593 13.219635615087553 183510.0 847.5938393464942 0.0 - - - - - - - 271.2 367 5 CDC34 cell division cycle 34 homolog (S. cerevisiae) 3059 385 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9156.[MT7]-ALLLELK[MT7].2y5_1.heavy 544.37 / 759.51 118422.0 36.429100036621094 50 20 10 10 10 10.264594989617438 9.742225592061768 0.0 3 0.9912972834328593 13.219635615087553 118422.0 259.2009557522124 0.0 - - - - - - - 226.0 236 2 CDC34 cell division cycle 34 homolog (S. cerevisiae) 3061 385 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9156.[MT7]-ALLLELK[MT7].2y3_1.heavy 544.37 / 533.341 146446.0 36.429100036621094 50 20 10 10 10 10.264594989617438 9.742225592061768 0.0 3 0.9912972834328593 13.219635615087553 146446.0 199.72012958280658 0.0 - - - - - - - 339.0 292 4 CDC34 cell division cycle 34 homolog (S. cerevisiae) 3063 385 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9156.[MT7]-ALLLELK[MT7].2y6_1.heavy 544.37 / 872.594 89947.0 36.429100036621094 50 20 10 10 10 10.264594989617438 9.742225592061768 0.0 3 0.9912972834328593 13.219635615087553 89947.0 444.3620597345133 0.0 - - - - - - - 339.0 179 8 CDC34 cell division cycle 34 homolog (S. cerevisiae) 3065 386 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9157.[MT7]-QQLVVSK[MT7].2y4_1.heavy 545.347 / 576.384 42960.0 21.447200775146484 43 13 10 10 10 2.2887361137424973 34.671076045050064 0.0 3 0.9223023869004022 4.398510421136613 42960.0 76.24942183256915 0.0 - - - - - - - 624.5714285714286 85 7 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 3067 386 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9157.[MT7]-QQLVVSK[MT7].2b3_1.heavy 545.347 / 514.311 30098.0 21.447200775146484 43 13 10 10 10 2.2887361137424973 34.671076045050064 0.0 3 0.9223023869004022 4.398510421136613 30098.0 36.857878143481344 0.0 - - - - - - - 1122.4545454545455 60 11 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 3069 386 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9157.[MT7]-QQLVVSK[MT7].2y5_1.heavy 545.347 / 689.468 26496.0 21.447200775146484 43 13 10 10 10 2.2887361137424973 34.671076045050064 0.0 3 0.9223023869004022 4.398510421136613 26496.0 22.077063229916735 0.0 - - - - - - - 257.0 52 9 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 3071 386 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9157.[MT7]-QQLVVSK[MT7].2b6_1.heavy 545.347 / 799.479 8232.0 21.447200775146484 43 13 10 10 10 2.2887361137424973 34.671076045050064 0.0 3 0.9223023869004022 4.398510421136613 8232.0 10.080870917573872 0.0 - - - - - - - 257.0 16 4 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 3073 387 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9158.[MT7]-IC[CAM]DFGLAR.2b3_1.heavy 548.291 / 533.251 61333.0 30.876100540161133 50 20 10 10 10 11.806561383510104 8.469866606518238 0.0 3 0.9938516102889015 15.731093316836475 61333.0 72.99708264441111 0.0 - - - - - - - 333.0 122 1 FLT1;FLT3;FLT4;KDR;KIT;PDGFRA;PDGFRB;NLK;MAPK1;MAPK3 fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor);fms-related tyrosine kinase 3;fms-related tyrosine kinase 4;kinase insert domain receptor (a type III receptor tyrosine kinase);v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog;platelet-derived growth factor receptor, alpha polypeptide;platelet-derived growth factor receptor, beta polypeptide;nemo-like kinase;mitogen-activated protein kinase 1;mitogen-activated protein kinase 3 3075 387 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9158.[MT7]-IC[CAM]DFGLAR.2y5_1.heavy 548.291 / 563.33 90000.0 30.876100540161133 50 20 10 10 10 11.806561383510104 8.469866606518238 0.0 3 0.9938516102889015 15.731093316836475 90000.0 170.11539665229535 0.0 - - - - - - - 333.0 180 3 FLT1;FLT3;FLT4;KDR;KIT;PDGFRA;PDGFRB;NLK;MAPK1;MAPK3 fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor);fms-related tyrosine kinase 3;fms-related tyrosine kinase 4;kinase insert domain receptor (a type III receptor tyrosine kinase);v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog;platelet-derived growth factor receptor, alpha polypeptide;platelet-derived growth factor receptor, beta polypeptide;nemo-like kinase;mitogen-activated protein kinase 1;mitogen-activated protein kinase 3 3077 387 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9158.[MT7]-IC[CAM]DFGLAR.2b5_1.heavy 548.291 / 737.341 36000.0 30.876100540161133 50 20 10 10 10 11.806561383510104 8.469866606518238 0.0 3 0.9938516102889015 15.731093316836475 36000.0 50.040000000000006 1.0 - - - - - - - 333.0 80 2 FLT1;FLT3;FLT4;KDR;KIT;PDGFRA;PDGFRB;NLK;MAPK1;MAPK3 fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor);fms-related tyrosine kinase 3;fms-related tyrosine kinase 4;kinase insert domain receptor (a type III receptor tyrosine kinase);v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog;platelet-derived growth factor receptor, alpha polypeptide;platelet-derived growth factor receptor, beta polypeptide;nemo-like kinase;mitogen-activated protein kinase 1;mitogen-activated protein kinase 3 3079 387 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9158.[MT7]-IC[CAM]DFGLAR.2y7_1.heavy 548.291 / 838.388 85000.0 30.876100540161133 50 20 10 10 10 11.806561383510104 8.469866606518238 0.0 3 0.9938516102889015 15.731093316836475 85000.0 279.88993993993995 0.0 - - - - - - - 333.0 170 3 FLT1;FLT3;FLT4;KDR;KIT;PDGFRA;PDGFRB;NLK;MAPK1;MAPK3 fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor);fms-related tyrosine kinase 3;fms-related tyrosine kinase 4;kinase insert domain receptor (a type III receptor tyrosine kinase);v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog;platelet-derived growth factor receptor, alpha polypeptide;platelet-derived growth factor receptor, beta polypeptide;nemo-like kinase;mitogen-activated protein kinase 1;mitogen-activated protein kinase 3 3081 388 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9119.[MT7]-LADFGLAR.2y5_1.heavy 503.794 / 563.33 158485.0 32.35900115966797 47 17 10 10 10 5.975889257568957 16.733911170348705 0.0 3 0.9772065490595561 8.158849779238153 158485.0 284.19461314767966 0.0 - - - - - - - 316.0 316 2 CDK2;CDK3;CDK4;CDK5;CDK6;CDK9;CDK16;CDK17;CDK18;CDK12;CDK14;CDK15;CDK13;CDK1 cyclin-dependent kinase 2;cyclin-dependent kinase 3;cyclin-dependent kinase 4;cyclin-dependent kinase 5;cyclin-dependent kinase 6;cyclin-dependent kinase 9;cyclin-dependent kinase 16;cyclin-dependent kinase 17;cyclin-dependent kinase 18;cyclin-dependent kinase 12;cyclin-dependent kinase 14;cyclin-dependent kinase 15;cyclin-dependent kinase 13;cyclin-dependent kinase 1 3083 388 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9119.[MT7]-LADFGLAR.2y6_1.heavy 503.794 / 678.357 34164.0 32.35900115966797 47 17 10 10 10 5.975889257568957 16.733911170348705 0.0 3 0.9772065490595561 8.158849779238153 34164.0 59.58640316205533 0.0 - - - - - - - 316.0 68 3 CDK2;CDK3;CDK4;CDK5;CDK6;CDK9;CDK16;CDK17;CDK18;CDK12;CDK14;CDK15;CDK13;CDK1 cyclin-dependent kinase 2;cyclin-dependent kinase 3;cyclin-dependent kinase 4;cyclin-dependent kinase 5;cyclin-dependent kinase 6;cyclin-dependent kinase 9;cyclin-dependent kinase 16;cyclin-dependent kinase 17;cyclin-dependent kinase 18;cyclin-dependent kinase 12;cyclin-dependent kinase 14;cyclin-dependent kinase 15;cyclin-dependent kinase 13;cyclin-dependent kinase 1 3085 388 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9119.[MT7]-LADFGLAR.2b5_1.heavy 503.794 / 648.347 34164.0 32.35900115966797 47 17 10 10 10 5.975889257568957 16.733911170348705 0.0 3 0.9772065490595561 8.158849779238153 34164.0 136.3659493670886 0.0 - - - - - - - 316.0 68 4 CDK2;CDK3;CDK4;CDK5;CDK6;CDK9;CDK16;CDK17;CDK18;CDK12;CDK14;CDK15;CDK13;CDK1 cyclin-dependent kinase 2;cyclin-dependent kinase 3;cyclin-dependent kinase 4;cyclin-dependent kinase 5;cyclin-dependent kinase 6;cyclin-dependent kinase 9;cyclin-dependent kinase 16;cyclin-dependent kinase 17;cyclin-dependent kinase 18;cyclin-dependent kinase 12;cyclin-dependent kinase 14;cyclin-dependent kinase 15;cyclin-dependent kinase 13;cyclin-dependent kinase 1 3087 388 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9119.[MT7]-LADFGLAR.2y7_1.heavy 503.794 / 749.394 127168.0 32.35900115966797 47 17 10 10 10 5.975889257568957 16.733911170348705 0.0 3 0.9772065490595561 8.158849779238153 127168.0 166.16261327713383 0.0 - - - - - - - 316.0 254 2 CDK2;CDK3;CDK4;CDK5;CDK6;CDK9;CDK16;CDK17;CDK18;CDK12;CDK14;CDK15;CDK13;CDK1 cyclin-dependent kinase 2;cyclin-dependent kinase 3;cyclin-dependent kinase 4;cyclin-dependent kinase 5;cyclin-dependent kinase 6;cyclin-dependent kinase 9;cyclin-dependent kinase 16;cyclin-dependent kinase 17;cyclin-dependent kinase 18;cyclin-dependent kinase 12;cyclin-dependent kinase 14;cyclin-dependent kinase 15;cyclin-dependent kinase 13;cyclin-dependent kinase 1 3089 389 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9118.[MT7]-FLPVLK[MT7].2b3_1.heavy 502.841 / 502.315 69611.0 34.94900131225586 44 14 10 10 10 0.8436984778536653 70.48739994879654 0.0 3 0.9434357144136756 5.164431491246409 69611.0 31.962270422881687 0.0 - - - - - - - 635.0 139 2 PIK3CB phosphoinositide-3-kinase, catalytic, beta polypeptide 3091 389 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9118.[MT7]-FLPVLK[MT7].2y4_1.heavy 502.841 / 600.42 173011.0 34.94900131225586 44 14 10 10 10 0.8436984778536653 70.48739994879654 0.0 3 0.9434357144136756 5.164431491246409 173011.0 733.139382544758 0.0 - - - - - - - 254.0 346 2 PIK3CB phosphoinositide-3-kinase, catalytic, beta polypeptide 3093 389 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9118.[MT7]-FLPVLK[MT7].2y5_1.heavy 502.841 / 713.504 39887.0 34.94900131225586 44 14 10 10 10 0.8436984778536653 70.48739994879654 0.0 3 0.9434357144136756 5.164431491246409 39887.0 168.55136482939633 0.0 - - - - - - - 254.0 79 5 PIK3CB phosphoinositide-3-kinase, catalytic, beta polypeptide 3095 389 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9118.[MT7]-FLPVLK[MT7].2b4_1.heavy 502.841 / 601.383 12703.0 34.94900131225586 44 14 10 10 10 0.8436984778536653 70.48739994879654 0.0 3 0.9434357144136756 5.164431491246409 12703.0 35.84179790026246 0.0 - - - - - - - 254.0 25 5 PIK3CB phosphoinositide-3-kinase, catalytic, beta polypeptide 3097 390 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A397.[MT7]-LC[CAM]FAVYAVLDK[MT7].2y5_1.heavy 793.946 / 689.431 3948.0 41.05614948272705 40 14 10 6 10 3.651364090073322 27.387025104360905 0.036998748779296875 3 0.9476440950677091 5.369900720935627 3948.0 12.396455696202532 0.0 - - - - - - - 639.0 7 7 PIK3CB phosphoinositide-3-kinase, catalytic, beta polypeptide 3099 390 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A397.[MT7]-LC[CAM]FAVYAVLDK[MT7].2b4_1.heavy 793.946 / 636.33 8159.0 41.05614948272705 40 14 10 6 10 3.651364090073322 27.387025104360905 0.036998748779296875 3 0.9476440950677091 5.369900720935627 8159.0 43.12171102661597 0.0 - - - - - - - 235.07142857142858 16 14 PIK3CB phosphoinositide-3-kinase, catalytic, beta polypeptide 3101 390 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A397.[MT7]-LC[CAM]FAVYAVLDK[MT7].2y3_1.heavy 793.946 / 519.326 3290.0 41.05614948272705 40 14 10 6 10 3.651364090073322 27.387025104360905 0.036998748779296875 3 0.9476440950677091 5.369900720935627 3290.0 15.825316455696203 1.0 - - - - - - - 639.1428571428571 6 7 PIK3CB phosphoinositide-3-kinase, catalytic, beta polypeptide 3103 390 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A397.[MT7]-LC[CAM]FAVYAVLDK[MT7].2y6_1.heavy 793.946 / 852.495 6843.0 41.05614948272705 40 14 10 6 10 3.651364090073322 27.387025104360905 0.036998748779296875 3 0.9476440950677091 5.369900720935627 6843.0 53.41302265324252 0.0 - - - - - - - 245.8 13 15 PIK3CB phosphoinositide-3-kinase, catalytic, beta polypeptide 3105 391 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9019.[MT7]-TVDTK[MT7].2y4_1.heavy 426.257 / 606.358 41767.0 14.684300422668457 46 16 10 10 10 3.3695313480069626 29.677717662175425 0.0 3 0.965188076186489 6.5952361893964415 41767.0 84.33209554140127 0.0 - - - - - - - 348.8888888888889 83 9 KRAS;NRAS v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog;neuroblastoma RAS viral (v-ras) oncogene homolog 3107 391 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9019.[MT7]-TVDTK[MT7].2b3_1.heavy 426.257 / 460.252 84947.0 14.684300422668457 46 16 10 10 10 3.3695313480069626 29.677717662175425 0.0 3 0.965188076186489 6.5952361893964415 84947.0 115.70439000489955 0.0 - - - - - - - 1211.142857142857 169 7 KRAS;NRAS v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog;neuroblastoma RAS viral (v-ras) oncogene homolog 3109 391 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9019.[MT7]-TVDTK[MT7].2y3_1.heavy 426.257 / 507.289 30305.0 14.684300422668457 46 16 10 10 10 3.3695313480069626 29.677717662175425 0.0 3 0.965188076186489 6.5952361893964415 30305.0 21.860135350318473 0.0 - - - - - - - 255.125 60 8 KRAS;NRAS v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog;neuroblastoma RAS viral (v-ras) oncogene homolog 3111 391 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9019.[MT7]-TVDTK[MT7].2y2_1.heavy 426.257 / 392.263 135665.0 14.684300422668457 46 16 10 10 10 3.3695313480069626 29.677717662175425 0.0 3 0.965188076186489 6.5952361893964415 135665.0 105.60312772376801 0.0 - - - - - - - 418.6666666666667 271 3 KRAS;NRAS v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog;neuroblastoma RAS viral (v-ras) oncogene homolog 3113 392 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9612.[MT7]-EGAGAALVAEVIK[MT7].3b6_1.heavy 505.971 / 601.306 28935.0 34.860599517822266 47 17 10 10 10 7.281213573822643 13.733974286857778 0.0 3 0.9755072050434218 7.869601934238659 28935.0 126.31396892364683 0.0 - - - - - - - 258.0 57 3 CDC14B CDC14 cell division cycle 14 homolog B (S. cerevisiae) 3115 392 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9612.[MT7]-EGAGAALVAEVIK[MT7].3b5_1.heavy 505.971 / 530.269 17826.0 34.860599517822266 47 17 10 10 10 7.281213573822643 13.733974286857778 0.0 3 0.9755072050434218 7.869601934238659 17826.0 21.058806634104258 0.0 - - - - - - - 258.0 35 4 CDC14B CDC14 cell division cycle 14 homolog B (S. cerevisiae) 3117 392 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9612.[MT7]-EGAGAALVAEVIK[MT7].3y5_1.heavy 505.971 / 703.447 15759.0 34.860599517822266 47 17 10 10 10 7.281213573822643 13.733974286857778 0.0 3 0.9755072050434218 7.869601934238659 15759.0 34.928750935265285 0.0 - - - - - - - 258.0 31 2 CDC14B CDC14 cell division cycle 14 homolog B (S. cerevisiae) 3119 392 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9612.[MT7]-EGAGAALVAEVIK[MT7].3b7_1.heavy 505.971 / 714.39 21443.0 34.860599517822266 47 17 10 10 10 7.281213573822643 13.733974286857778 0.0 3 0.9755072050434218 7.869601934238659 21443.0 30.16470237017144 0.0 - - - - - - - 258.0 42 2 CDC14B CDC14 cell division cycle 14 homolog B (S. cerevisiae) 3121 393 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A188.[MT7]-LYEEYTR.2b3_1.heavy 559.286 / 550.299 N/A 25.415599822998047 48 18 10 10 10 2.709180227583464 36.91153470775108 0.0 3 0.9889859455742978 11.748687205306068 24866.0 7.338054460434263 4.0 - - - - - - - 932.0 119 2 PIK3R1;PIK3R3 phosphoinositide-3-kinase, regulatory subunit 1 (alpha);phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 3123 393 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A188.[MT7]-LYEEYTR.2b4_1.heavy 559.286 / 679.342 29528.0 25.415599822998047 48 18 10 10 10 2.709180227583464 36.91153470775108 0.0 3 0.9889859455742978 11.748687205306068 29528.0 53.85371367210024 0.0 - - - - - - - 815.75 59 8 PIK3R1;PIK3R3 phosphoinositide-3-kinase, regulatory subunit 1 (alpha);phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 3125 393 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A188.[MT7]-LYEEYTR.2y6_1.heavy 559.286 / 860.378 86719.0 25.415599822998047 48 18 10 10 10 2.709180227583464 36.91153470775108 0.0 3 0.9889859455742978 11.748687205306068 86719.0 351.43017460635076 0.0 - - - - - - - 684.0 173 10 PIK3R1;PIK3R3 phosphoinositide-3-kinase, regulatory subunit 1 (alpha);phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 3127 393 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A188.[MT7]-LYEEYTR.2b5_1.heavy 559.286 / 842.405 4973.0 25.415599822998047 48 18 10 10 10 2.709180227583464 36.91153470775108 0.0 3 0.9889859455742978 11.748687205306068 4973.0 7.576244505712678 0.0 - - - - - - - 311.0 9 5 PIK3R1;PIK3R3 phosphoinositide-3-kinase, regulatory subunit 1 (alpha);phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 3129 394 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9024.[MT7]-VVILK[MT7].2b3_1.heavy 430.315 / 456.33 32333.0 27.386499404907227 44 18 8 10 8 5.835486805403508 17.13653090731053 0.0 4 0.9843297747267369 9.845912889924847 32333.0 52.62783953488372 0.0 - - - - - - - 333.0 64 4 MYC;MYCN;CHRNA9 v-myc myelocytomatosis viral oncogene homolog (avian);v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian);cholinergic receptor, nicotinic, alpha 9 3131 394 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9024.[MT7]-VVILK[MT7].2y4_1.heavy 430.315 / 616.451 139000.0 27.386499404907227 44 18 8 10 8 5.835486805403508 17.13653090731053 0.0 4 0.9843297747267369 9.845912889924847 139000.0 34.75130320645041 1.0 - - - - - - - 333.0 354 1 MYC;MYCN;CHRNA9 v-myc myelocytomatosis viral oncogene homolog (avian);v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian);cholinergic receptor, nicotinic, alpha 9 3133 394 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9024.[MT7]-VVILK[MT7].2b4_1.heavy 430.315 / 569.414 10000.0 27.386499404907227 44 18 8 10 8 5.835486805403508 17.13653090731053 0.0 4 0.9843297747267369 9.845912889924847 10000.0 10.501500375093773 1.0 - - - - - - - 333.0 37 3 MYC;MYCN;CHRNA9 v-myc myelocytomatosis viral oncogene homolog (avian);v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian);cholinergic receptor, nicotinic, alpha 9 3135 394 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9024.[MT7]-VVILK[MT7].2y3_1.heavy 430.315 / 517.383 83333.0 27.386499404907227 44 18 8 10 8 5.835486805403508 17.13653090731053 0.0 4 0.9843297747267369 9.845912889924847 83333.0 120.82485163167367 0.0 - - - - - - - 333.0 166 5 MYC;MYCN;CHRNA9 v-myc myelocytomatosis viral oncogene homolog (avian);v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian);cholinergic receptor, nicotinic, alpha 9 3137 395 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A184.[MT7]-FSNIVDK[MT7].2b4_1.heavy 555.823 / 606.337 36431.0 26.366199493408203 43 13 10 10 10 1.118546100468121 52.07962191743036 0.0 3 0.911977631583112 4.1288348979463025 36431.0 24.10127854078904 0.0 - - - - - - - 322.0 72 3 CDC25B cell division cycle 25 homolog B (S. pombe) 3139 395 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A184.[MT7]-FSNIVDK[MT7].2y3_1.heavy 555.823 / 505.31 57387.0 26.366199493408203 43 13 10 10 10 1.118546100468121 52.07962191743036 0.0 3 0.911977631583112 4.1288348979463025 57387.0 26.06209930933688 0.0 - - - - - - - 322.0 114 1 CDC25B cell division cycle 25 homolog B (S. pombe) 3141 395 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A184.[MT7]-FSNIVDK[MT7].2y6_1.heavy 555.823 / 819.469 33530.0 26.366199493408203 43 13 10 10 10 1.118546100468121 52.07962191743036 0.0 3 0.911977631583112 4.1288348979463025 33530.0 50.83245087900724 0.0 - - - - - - - 322.0 67 3 CDC25B cell division cycle 25 homolog B (S. pombe) 3143 395 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A184.[MT7]-FSNIVDK[MT7].2b5_1.heavy 555.823 / 705.405 10639.0 26.366199493408203 43 13 10 10 10 1.118546100468121 52.07962191743036 0.0 3 0.911977631583112 4.1288348979463025 10639.0 11.389662162881157 1.0 - - - - - - - 322.0 40 3 CDC25B cell division cycle 25 homolog B (S. pombe) 3145 396 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9605.[MT7]-AAFSK[MT7].2b3_1.heavy 406.249 / 434.252 5192.0 19.56920051574707 50 20 10 10 10 9.921032569694406 10.079595979300395 0.0 3 0.9925824598514894 14.320678713264401 5192.0 8.598333333333333 0.0 - - - - - - - 842.8571428571429 10 7 NCAM1;CDC14B neural cell adhesion molecule 1;CDC14 cell division cycle 14 homolog B (S. cerevisiae) 3147 396 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9605.[MT7]-AAFSK[MT7].2y4_1.heavy 406.249 / 596.352 27376.0 19.56920051574707 50 20 10 10 10 9.921032569694406 10.079595979300395 0.0 3 0.9925824598514894 14.320678713264401 27376.0 43.596666666666664 0.0 - - - - - - - 354.0 54 4 NCAM1;CDC14B neural cell adhesion molecule 1;CDC14 cell division cycle 14 homolog B (S. cerevisiae) 3149 396 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9605.[MT7]-AAFSK[MT7].2b4_1.heavy 406.249 / 521.284 2360.0 19.56920051574707 50 20 10 10 10 9.921032569694406 10.079595979300395 0.0 3 0.9925824598514894 14.320678713264401 2360.0 5.9 7.0 - - - - - - - 337.14285714285717 25 7 NCAM1;CDC14B neural cell adhesion molecule 1;CDC14 cell division cycle 14 homolog B (S. cerevisiae) 3151 396 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9605.[MT7]-AAFSK[MT7].2y3_1.heavy 406.249 / 525.315 16992.0 19.56920051574707 50 20 10 10 10 9.921032569694406 10.079595979300395 0.0 3 0.9925824598514894 14.320678713264401 16992.0 124.56 0.0 - - - - - - - 236.0 33 5 NCAM1;CDC14B neural cell adhesion molecule 1;CDC14 cell division cycle 14 homolog B (S. cerevisiae) 3153 397 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9025.[MT7]-VILVK[MT7].2b3_1.heavy 430.315 / 470.346 39871.0 26.919099807739258 43 18 10 5 10 5.790052074954515 17.27100183305097 0.0446014404296875 3 0.9801541610489144 8.74594548283656 39871.0 147.41746270749988 0.0 - - - - - - - 330.0 79 7 AKT1 v-akt murine thymoma viral oncogene homolog 1 3155 397 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9025.[MT7]-VILVK[MT7].2y4_1.heavy 430.315 / 616.451 170028.0 26.919099807739258 43 18 10 5 10 5.790052074954515 17.27100183305097 0.0446014404296875 3 0.9801541610489144 8.74594548283656 170028.0 581.2020283721481 0.0 - - - - - - - 330.0 340 3 AKT1 v-akt murine thymoma viral oncogene homolog 1 3157 397 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9025.[MT7]-VILVK[MT7].2b4_1.heavy 430.315 / 569.414 20100.0 26.919099807739258 43 18 10 5 10 5.790052074954515 17.27100183305097 0.0446014404296875 3 0.9801541610489144 8.74594548283656 20100.0 58.56145675265554 0.0 - - - - - - - 330.0 40 1 AKT1 v-akt murine thymoma viral oncogene homolog 1 3159 397 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9025.[MT7]-VILVK[MT7].2y3_1.heavy 430.315 / 503.367 107421.0 26.919099807739258 43 18 10 5 10 5.790052074954515 17.27100183305097 0.0446014404296875 3 0.9801541610489144 8.74594548283656 107421.0 105.41059180576632 0.0 - - - - - - - 1836.0 214 7 AKT1 v-akt murine thymoma viral oncogene homolog 1 3161 398 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A185.[MT7]-EYAVGC[CAM]LR.2b3_1.heavy 556.288 / 508.252 4351.0 25.415599822998047 42 12 10 10 10 1.089696670472099 54.94379302881176 0.0 3 0.887758676604607 3.6486949668980246 4351.0 5.414686728420635 2.0 - - - - - - - 684.0 8 10 PIK3CB phosphoinositide-3-kinase, catalytic, beta polypeptide 3163 398 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A185.[MT7]-EYAVGC[CAM]LR.2y6_1.heavy 556.288 / 675.361 5595.0 25.415599822998047 42 12 10 10 10 1.089696670472099 54.94379302881176 0.0 3 0.887758676604607 3.6486949668980246 5595.0 11.426045598114715 1.0 - - - - - - - 311.0 11 5 PIK3CB phosphoinositide-3-kinase, catalytic, beta polypeptide 3165 398 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A185.[MT7]-EYAVGC[CAM]LR.2b5_1.heavy 556.288 / 664.342 1865.0 25.415599822998047 42 12 10 10 10 1.089696670472099 54.94379302881176 0.0 3 0.887758676604607 3.6486949668980246 1865.0 0.6001609010458566 8.0 - - - - - - - 311.0 7 7 PIK3CB phosphoinositide-3-kinase, catalytic, beta polypeptide 3167 398 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A185.[MT7]-EYAVGC[CAM]LR.2y7_1.heavy 556.288 / 838.424 9014.0 25.415599822998047 42 12 10 10 10 1.089696670472099 54.94379302881176 0.0 3 0.887758676604607 3.6486949668980246 9014.0 23.24498171480618 0.0 - - - - - - - 311.0 18 5 PIK3CB phosphoinositide-3-kinase, catalytic, beta polypeptide 3169 399 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9027.[MT7]-VQEGER.2b3_1.heavy 431.231 / 501.279 8023.0 14.192399978637695 48 18 10 10 10 4.235711250629775 17.60650850930827 0.0 3 0.9893821707840784 11.966288788783311 8023.0 20.091404104326447 1.0 - - - - - - - 642.0 16 10 CDC25C cell division cycle 25 homolog C (S. pombe) 3171 399 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9027.[MT7]-VQEGER.2y4_1.heavy 431.231 / 490.226 5616.0 14.192399978637695 48 18 10 10 10 4.235711250629775 17.60650850930827 0.0 3 0.9893821707840784 11.966288788783311 5616.0 5.707422647150555 1.0 - - - - - - - 233.875 11 8 CDC25C cell division cycle 25 homolog C (S. pombe) 3173 399 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9027.[MT7]-VQEGER.2y5_1.heavy 431.231 / 618.284 28482.0 14.192399978637695 48 18 10 10 10 4.235711250629775 17.60650850930827 0.0 3 0.9893821707840784 11.966288788783311 28482.0 78.09698417507633 0.0 - - - - - - - 702.0 56 8 CDC25C cell division cycle 25 homolog C (S. pombe) 3175 399 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9027.[MT7]-VQEGER.2b4_1.heavy 431.231 / 558.3 4012.0 14.192399978637695 48 18 10 10 10 4.235711250629775 17.60650850930827 0.0 3 0.9893821707840784 11.966288788783311 4012.0 14.355470873378351 1.0 - - - - - - - 284.0 10 16 CDC25C cell division cycle 25 homolog C (S. pombe) 3177 400 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A183.[MT7]-RLEFEK[MT7].3y3_1.heavy 370.557 / 567.326 41291.0 23.45210075378418 48 18 10 10 10 3.6450405200389775 27.43453727063936 0.0 3 0.9825610607279844 9.33188059631275 41291.0 185.3374608904934 0.0 - - - - - - - 277.0 82 4 SMC1B structural maintenance of chromosomes 1B 3179 400 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A183.[MT7]-RLEFEK[MT7].3b5_1.heavy 370.557 / 819.448 2771.0 23.45210075378418 48 18 10 10 10 3.6450405200389775 27.43453727063936 0.0 3 0.9825610607279844 9.33188059631275 2771.0 5.001805054151625 0.0 - - - - - - - 277.0 5 2 SMC1B structural maintenance of chromosomes 1B 3181 400 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A183.[MT7]-RLEFEK[MT7].3b3_1.heavy 370.557 / 543.337 21615.0 23.45210075378418 48 18 10 10 10 3.6450405200389775 27.43453727063936 0.0 3 0.9825610607279844 9.33188059631275 21615.0 67.10794223826716 1.0 - - - - - - - 277.0 43 3 SMC1B structural maintenance of chromosomes 1B 3183 400 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A183.[MT7]-RLEFEK[MT7].3y2_1.heavy 370.557 / 420.258 82581.0 23.45210075378418 48 18 10 10 10 3.6450405200389775 27.43453727063936 0.0 3 0.9825610607279844 9.33188059631275 82581.0 132.5636255098692 0.0 - - - - - - - 712.2857142857143 165 7 SMC1B structural maintenance of chromosomes 1B 3185 401 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9029.[MT7]-LVSEK[MT7].2b3_1.heavy 432.276 / 444.294 6234.0 19.74679946899414 46 20 8 10 8 72.06213875956092 1.3876912581467393 0.0 4 0.9985407657033101 32.30331035807752 6234.0 3.929864846318036 1.0 - - - - - - - 308.57142857142856 13 7 LAD1;MYC;RNMT ladinin 1;v-myc myelocytomatosis viral oncogene homolog (avian);RNA (guanine-7-) methyltransferase 3187 401 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9029.[MT7]-LVSEK[MT7].2y4_1.heavy 432.276 / 606.358 99264.0 19.74679946899414 46 20 8 10 8 72.06213875956092 1.3876912581467393 0.0 4 0.9985407657033101 32.30331035807752 99264.0 19.59048281539381 1.0 - - - - - - - 400.0 258 3 LAD1;MYC;RNMT ladinin 1;v-myc myelocytomatosis viral oncogene homolog (avian);RNA (guanine-7-) methyltransferase 3189 401 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9029.[MT7]-LVSEK[MT7].2b4_1.heavy 432.276 / 573.336 10550.0 19.74679946899414 46 20 8 10 8 72.06213875956092 1.3876912581467393 0.0 4 0.9985407657033101 32.30331035807752 10550.0 9.523324489968978 1.0 - - - - - - - 1267.5714285714287 21 7 LAD1;MYC;RNMT ladinin 1;v-myc myelocytomatosis viral oncogene homolog (avian);RNA (guanine-7-) methyltransferase 3191 401 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9029.[MT7]-LVSEK[MT7].2y3_1.heavy 432.276 / 507.289 96387.0 19.74679946899414 46 20 8 10 8 72.06213875956092 1.3876912581467393 0.0 4 0.9985407657033101 32.30331035807752 96387.0 60.19361277635251 0.0 - - - - - - - 899.0 192 4 LAD1;MYC;RNMT ladinin 1;v-myc myelocytomatosis viral oncogene homolog (avian);RNA (guanine-7-) methyltransferase 3193 402 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A395.[MT7]-VSDLQMLLGFVGR.2y8_1.heavy 789.943 / 892.507 12879.0 47.081298828125 48 18 10 10 10 2.8079173389925463 24.847491399022953 0.0 3 0.9849666971089477 10.052858896177861 12879.0 79.13184024266937 0.0 - - - - - - - 223.52941176470588 25 17 PIAS4 protein inhibitor of activated STAT, 4 3195 402 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A395.[MT7]-VSDLQMLLGFVGR.2y9_1.heavy 789.943 / 1020.57 16679.0 47.081298828125 48 18 10 10 10 2.8079173389925463 24.847491399022953 0.0 3 0.9849666971089477 10.052858896177861 16679.0 205.57385481366458 0.0 - - - - - - - 181.0625 33 16 PIAS4 protein inhibitor of activated STAT, 4 3197 402 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A395.[MT7]-VSDLQMLLGFVGR.2y10_1.heavy 789.943 / 1133.65 16357.0 47.081298828125 48 18 10 10 10 2.8079173389925463 24.847491399022953 0.0 3 0.9849666971089477 10.052858896177861 16357.0 117.27061165171236 0.0 - - - - - - - 208.47619047619048 32 21 PIAS4 protein inhibitor of activated STAT, 4 3199 402 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A395.[MT7]-VSDLQMLLGFVGR.2b5_1.heavy 789.943 / 687.379 17130.0 47.081298828125 48 18 10 10 10 2.8079173389925463 24.847491399022953 0.0 3 0.9849666971089477 10.052858896177861 17130.0 45.750931677018635 0.0 - - - - - - - 595.6666666666666 34 12 PIAS4 protein inhibitor of activated STAT, 4 3201 403 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A396.[MT7]-FYTQQWEDYR.3b4_1.heavy 527.248 / 684.347 N/A N/A - - - - - - - - - 0.0 - - - - - - - CUL1 cullin 1 3203 403 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A396.[MT7]-FYTQQWEDYR.3b3_1.heavy 527.248 / 556.289 N/A N/A - - - - - - - - - 0.0 - - - - - - - CUL1 cullin 1 3205 403 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A396.[MT7]-FYTQQWEDYR.3y4_1.heavy 527.248 / 582.252 N/A N/A - - - - - - - - - 0.0 - - - - - - - CUL1 cullin 1 3207 403 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A396.[MT7]-FYTQQWEDYR.3y5_1.heavy 527.248 / 768.331 N/A N/A - - - - - - - - - 0.0 - - - - - - - CUL1 cullin 1 3209 404 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9127.[MT7]-LASELAK[MT7].2y5_1.heavy 510.321 / 691.411 19060.0 24.86514949798584 31 14 2 5 10 1.8739774351370224 42.13585014617907 0.04490089416503906 3 0.9499060942949838 5.490856327084161 19060.0 35.528631826224725 0.0 - - - - - - - 303.0 38 4 ORC2 origin recognition complex, subunit 2 3211 404 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9127.[MT7]-LASELAK[MT7].2b4_1.heavy 510.321 / 545.305 16338.0 24.86514949798584 31 14 2 5 10 1.8739774351370224 42.13585014617907 0.04490089416503906 3 0.9499060942949838 5.490856327084161 16338.0 33.39613223140496 0.0 - - - - - - - 303.0 32 3 ORC2 origin recognition complex, subunit 2 3213 404 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9127.[MT7]-LASELAK[MT7].2b6_1.heavy 510.321 / 729.426 6959.0 24.86514949798584 31 14 2 5 10 1.8739774351370224 42.13585014617907 0.04490089416503906 3 0.9499060942949838 5.490856327084161 6959.0 2.09932859220715 2.0 - - - - - - - 303.0 246 2 ORC2 origin recognition complex, subunit 2 3215 404 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9127.[MT7]-LASELAK[MT7].2y6_1.heavy 510.321 / 762.448 43869.0 24.86514949798584 31 14 2 5 10 1.8739774351370224 42.13585014617907 0.04490089416503906 3 0.9499060942949838 5.490856327084161 43869.0 77.68543640109569 0.0 - - - - - - - 303.0 87 5 ORC2 origin recognition complex, subunit 2 3217 405 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9128.[MT7]-NLALSGFR.2y5_1.heavy 511.299 / 579.325 56000.0 30.28689956665039 42 17 10 5 10 3.02630752869164 26.330577971423654 0.049800872802734375 3 0.9755342554494998 7.87396913227718 56000.0 97.8181775254105 0.0 - - - - - - - 333.0 112 5 UBA3 ubiquitin-like modifier activating enzyme 3 3219 405 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9128.[MT7]-NLALSGFR.2b4_1.heavy 511.299 / 556.357 25000.0 30.28689956665039 42 17 10 5 10 3.02630752869164 26.330577971423654 0.049800872802734375 3 0.9755342554494998 7.87396913227718 25000.0 37.98688155922039 0.0 - - - - - - - 333.0 50 4 UBA3 ubiquitin-like modifier activating enzyme 3 3221 405 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9128.[MT7]-NLALSGFR.2y6_1.heavy 511.299 / 650.362 92000.0 30.28689956665039 42 17 10 5 10 3.02630752869164 26.330577971423654 0.049800872802734375 3 0.9755342554494998 7.87396913227718 92000.0 94.54673668417104 0.0 - - - - - - - 333.0 184 3 UBA3 ubiquitin-like modifier activating enzyme 3 3223 405 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9128.[MT7]-NLALSGFR.2y7_1.heavy 511.299 / 763.446 81667.0 30.28689956665039 42 17 10 5 10 3.02630752869164 26.330577971423654 0.049800872802734375 3 0.9755342554494998 7.87396913227718 81667.0 60.98875160214917 0.0 - - - - - - - 333.0 163 4 UBA3 ubiquitin-like modifier activating enzyme 3 3225 406 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A394.[MT7]-INEPGQSAVFC[CAM]GR.2b3_1.heavy 789.894 / 501.279 50727.0 26.207850456237793 30 5 10 5 10 0.7486084418568006 83.58828531924681 0.04549980163574219 3 0.6466017984502695 2.011500930330246 50727.0 191.60899532710283 0.0 - - - - - - - 321.0 101 5 HERC2 hect domain and RLD 2 3227 406 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A394.[MT7]-INEPGQSAVFC[CAM]GR.2y9_1.heavy 789.894 / 981.457 3211.0 26.207850456237793 30 5 10 5 10 0.7486084418568006 83.58828531924681 0.04549980163574219 3 0.6466017984502695 2.011500930330246 3211.0 2.6115275923453494 0.0 - - - - - - - 321.0 6 1 HERC2 hect domain and RLD 2 3229 406 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A394.[MT7]-INEPGQSAVFC[CAM]GR.2y10_1.heavy 789.894 / 1078.51 21832.0 26.207850456237793 30 5 10 5 10 0.7486084418568006 83.58828531924681 0.04549980163574219 3 0.6466017984502695 2.011500930330246 21832.0 32.10591900311526 1.0 - - - - - - - 321.0 43 2 HERC2 hect domain and RLD 2 3231 406 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A394.[MT7]-INEPGQSAVFC[CAM]GR.2y7_1.heavy 789.894 / 796.377 5458.0 26.207850456237793 30 5 10 5 10 0.7486084418568006 83.58828531924681 0.04549980163574219 3 0.6466017984502695 2.011500930330246 5458.0 32.81601246105919 0.0 - - - - - - - 321.0 10 5 HERC2 hect domain and RLD 2 3233 407 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9121.[MT7]-AAPVQQPR.2y4_1.heavy 505.797 / 528.289 9864.0 15.980999946594238 50 20 10 10 10 6.732221407149258 14.853938091490182 0.0 3 0.9948438806436862 17.179641857966704 9864.0 35.7699917611355 0.0 - - - - - - - 274.0 19 9 CCNA2 cyclin A2 3235 407 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9121.[MT7]-AAPVQQPR.2y5_1.heavy 505.797 / 627.357 11951.0 15.980999946594238 50 20 10 10 10 6.732221407149258 14.853938091490182 0.0 3 0.9948438806436862 17.179641857966704 11951.0 119.0068 0.0 - - - - - - - 284.5 23 6 CCNA2 cyclin A2 3237 407 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9121.[MT7]-AAPVQQPR.2y6_1.heavy 505.797 / 724.41 107940.0 15.980999946594238 50 20 10 10 10 6.732221407149258 14.853938091490182 0.0 3 0.9948438806436862 17.179641857966704 107940.0 511.11857585897224 1.0 - - - - - - - 237.25 245 4 CCNA2 cyclin A2 3239 407 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9121.[MT7]-AAPVQQPR.2y7_1.heavy 505.797 / 795.447 77019.0 15.980999946594238 50 20 10 10 10 6.732221407149258 14.853938091490182 0.0 3 0.9948438806436862 17.179641857966704 77019.0 173.25891036906853 0.0 - - - - - - - 316.0 154 6 CCNA2 cyclin A2 3241 408 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9122.[MT7]-AALYFQR.2y4_1.heavy 506.788 / 613.309 12333.0 27.86935043334961 43 18 10 5 10 7.284721155683704 13.727361399684838 0.0475006103515625 3 0.9887030053005488 11.600353024382375 12333.0 18.648969166584482 0.0 - - - - - - - 333.0 24 6 CDC23 cell division cycle 23 homolog (S. cerevisiae) 3243 408 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9122.[MT7]-AALYFQR.2y5_1.heavy 506.788 / 726.393 6333.0 27.86935043334961 43 18 10 5 10 7.284721155683704 13.727361399684838 0.0475006103515625 3 0.9887030053005488 11.600353024382375 6333.0 22.056793830423107 0.0 - - - - - - - 333.0 12 4 CDC23 cell division cycle 23 homolog (S. cerevisiae) 3245 408 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9122.[MT7]-AALYFQR.2b4_1.heavy 506.788 / 563.331 10667.0 27.86935043334961 43 18 10 5 10 7.284721155683704 13.727361399684838 0.0475006103515625 3 0.9887030053005488 11.600353024382375 10667.0 22.395503935954004 0.0 - - - - - - - 333.0 21 7 CDC23 cell division cycle 23 homolog (S. cerevisiae) 3247 408 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9122.[MT7]-AALYFQR.2y6_1.heavy 506.788 / 797.43 20667.0 27.86935043334961 43 18 10 5 10 7.284721155683704 13.727361399684838 0.0475006103515625 3 0.9887030053005488 11.600353024382375 20667.0 35.085837209302326 0.0 - - - - - - - 333.0 41 3 CDC23 cell division cycle 23 homolog (S. cerevisiae) 3249 409 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A392.[MT7]-LVTQDTENELK[MT7].3y3_1.heavy 526.626 / 533.341 9124.0 25.683799743652344 40 13 9 10 8 1.7014411910178278 46.586074787098724 0.0 4 0.9233706843227522 4.429470190432629 9124.0 9.572012609445764 0.0 - - - - - - - 315.0 18 1 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 3251 409 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A392.[MT7]-LVTQDTENELK[MT7].3b4_1.heavy 526.626 / 586.368 6292.0 25.683799743652344 40 13 9 10 8 1.7014411910178278 46.586074787098724 0.0 4 0.9233706843227522 4.429470190432629 6292.0 13.802268599606586 0.0 - - - - - - - 674.0 12 7 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 3253 409 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A392.[MT7]-LVTQDTENELK[MT7].3b5_1.heavy 526.626 / 701.395 9753.0 25.683799743652344 40 13 9 10 8 1.7014411910178278 46.586074787098724 0.0 4 0.9233706843227522 4.429470190432629 9753.0 40.4154532889427 0.0 - - - - - - - 315.0 19 4 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 3255 409 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A392.[MT7]-LVTQDTENELK[MT7].3y4_1.heavy 526.626 / 647.385 16989.0 25.683799743652344 40 13 9 10 8 1.7014411910178278 46.586074787098724 0.0 4 0.9233706843227522 4.429470190432629 16989.0 29.70763166581337 1.0 - - - - - - - 315.0 41 3 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 3257 410 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9124.[MT7]-SAPGSTPVR.2y8_1.heavy 508.286 / 784.431 16598.0 15.889800071716309 50 20 10 10 10 10.152214938677306 9.85006726158111 0.0 3 0.9975736289390315 25.04931814180916 16598.0 57.05837665782494 0.0 - - - - - - - 323.2857142857143 33 7 POLE polymerase (DNA directed), epsilon 3259 410 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9124.[MT7]-SAPGSTPVR.2b6_1.heavy 508.286 / 645.332 3018.0 15.889800071716309 50 20 10 10 10 10.152214938677306 9.85006726158111 0.0 3 0.9975736289390315 25.04931814180916 3018.0 27.146031746031746 2.0 - - - - - - - 272.55555555555554 11 9 POLE polymerase (DNA directed), epsilon 3261 410 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9124.[MT7]-SAPGSTPVR.2y6_1.heavy 508.286 / 616.341 5470.0 15.889800071716309 50 20 10 10 10 10.152214938677306 9.85006726158111 0.0 3 0.9975736289390315 25.04931814180916 5470.0 18.856942010103946 0.0 - - - - - - - 242.71428571428572 10 7 POLE polymerase (DNA directed), epsilon 3263 410 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9124.[MT7]-SAPGSTPVR.2y7_1.heavy 508.286 / 713.394 33573.0 15.889800071716309 50 20 10 10 10 10.152214938677306 9.85006726158111 0.0 3 0.9975736289390315 25.04931814180916 33573.0 69.44343649001016 0.0 - - - - - - - 330.0 67 4 POLE polymerase (DNA directed), epsilon 3265 411 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A390.[MT7]-RNTELETLLAK[MT7].2b8_1.heavy 788.469 / 1101.6 N/A N/A - - - - - - - - - 0.0 - - - - - - - MID1 midline 1 (Opitz/BBB syndrome) 3267 411 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A390.[MT7]-RNTELETLLAK[MT7].2b6_1.heavy 788.469 / 887.47 N/A N/A - - - - - - - - - 0.0 - - - - - - - MID1 midline 1 (Opitz/BBB syndrome) 3269 411 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A390.[MT7]-RNTELETLLAK[MT7].2b5_1.heavy 788.469 / 758.428 N/A N/A - - - - - - - - - 0.0 - - - - - - - MID1 midline 1 (Opitz/BBB syndrome) 3271 411 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A390.[MT7]-RNTELETLLAK[MT7].2b9_1.heavy 788.469 / 1214.69 N/A N/A - - - - - - - - - 0.0 - - - - - - - MID1 midline 1 (Opitz/BBB syndrome) 3273 412 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A387.[MT7]-YQNLIDVGFSK[MT7].2y4_1.heavy 786.437 / 582.337 7433.0 34.77280044555664 44 14 10 10 10 1.229205465768478 54.23557616951192 0.0 3 0.9377013014583615 4.9186057683135 7433.0 6.027678911828637 0.0 - - - - - - - 609.0 14 8 CDC23 cell division cycle 23 homolog (S. cerevisiae) 3275 412 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A387.[MT7]-YQNLIDVGFSK[MT7].2b3_1.heavy 786.437 / 550.274 5639.0 34.77280044555664 44 14 10 10 10 1.229205465768478 54.23557616951192 0.0 3 0.9377013014583615 4.9186057683135 5639.0 8.066189856957086 0.0 - - - - - - - 256.0 11 8 CDC23 cell division cycle 23 homolog (S. cerevisiae) 3277 412 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A387.[MT7]-YQNLIDVGFSK[MT7].2y5_1.heavy 786.437 / 681.405 7946.0 34.77280044555664 44 14 10 10 10 1.229205465768478 54.23557616951192 0.0 3 0.9377013014583615 4.9186057683135 7946.0 20.44987637421831 0.0 - - - - - - - 609.0 15 8 CDC23 cell division cycle 23 homolog (S. cerevisiae) 3279 412 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A387.[MT7]-YQNLIDVGFSK[MT7].2y7_1.heavy 786.437 / 909.516 5639.0 34.77280044555664 44 14 10 10 10 1.229205465768478 54.23557616951192 0.0 3 0.9377013014583615 4.9186057683135 5639.0 11.36599479843953 0.0 - - - - - - - 732.4285714285714 11 7 CDC23 cell division cycle 23 homolog (S. cerevisiae) 3281 413 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9129.[MT7]-LASYQAAR.2b4_1.heavy 512.289 / 579.326 6576.0 21.068225383758545 46 20 10 6 10 5.575819544430737 17.93458328469084 0.03809928894042969 3 0.9955015169931872 18.393585171623428 6576.0 7.366996959361753 0.0 - - - - - - - 1048.142857142857 13 7 MYC v-myc myelocytomatosis viral oncogene homolog (avian) 3283 413 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9129.[MT7]-LASYQAAR.2y6_1.heavy 512.289 / 695.347 23521.0 21.068225383758545 46 20 10 6 10 5.575819544430737 17.93458328469084 0.03809928894042969 3 0.9955015169931872 18.393585171623428 23521.0 35.99504544338001 0.0 - - - - - - - 253.0 47 5 MYC v-myc myelocytomatosis viral oncogene homolog (avian) 3285 413 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9129.[MT7]-LASYQAAR.2b5_1.heavy 512.289 / 707.385 9611.0 21.068225383758545 46 20 10 6 10 5.575819544430737 17.93458328469084 0.03809928894042969 3 0.9955015169931872 18.393585171623428 9611.0 43.68636363636364 0.0 - - - - - - - 632.5 19 8 MYC v-myc myelocytomatosis viral oncogene homolog (avian) 3287 413 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9129.[MT7]-LASYQAAR.2y7_1.heavy 512.289 / 766.384 72332.0 21.068225383758545 46 20 10 6 10 5.575819544430737 17.93458328469084 0.03809928894042969 3 0.9955015169931872 18.393585171623428 72332.0 81.12226584583757 0.0 - - - - - - - 614.4285714285714 144 7 MYC v-myc myelocytomatosis viral oncogene homolog (avian) 3289 414 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A388.[MT7]-VVILMELEVLK[MT7].3b6_1.heavy 525.333 / 829.497 20369.0 46.023399353027344 48 18 10 10 10 3.86045935891872 25.903653089618096 0.0 3 0.9803445848572999 8.788349679555036 20369.0 292.6130332814238 0.0 - - - - - - - 224.83333333333334 40 6 RPA1 replication protein A1, 70kDa 3291 414 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A388.[MT7]-VVILMELEVLK[MT7].3b4_1.heavy 525.333 / 569.414 32799.0 46.023399353027344 48 18 10 10 10 3.86045935891872 25.903653089618096 0.0 3 0.9803445848572999 8.788349679555036 32799.0 194.7366776859504 0.0 - - - - - - - 127.5 65 10 RPA1 replication protein A1, 70kDa 3293 414 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A388.[MT7]-VVILMELEVLK[MT7].3b5_1.heavy 525.333 / 700.455 12206.0 46.023399353027344 48 18 10 10 10 3.86045935891872 25.903653089618096 0.0 3 0.9803445848572999 8.788349679555036 12206.0 38.51643233984241 0.0 - - - - - - - 211.1818181818182 24 11 RPA1 replication protein A1, 70kDa 3295 414 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A388.[MT7]-VVILMELEVLK[MT7].3y4_1.heavy 525.333 / 632.41 17448.0 46.023399353027344 48 18 10 10 10 3.86045935891872 25.903653089618096 0.0 3 0.9803445848572999 8.788349679555036 17448.0 243.12821903171954 0.0 - - - - - - - 237.33333333333334 34 6 RPA1 replication protein A1, 70kDa 3297 415 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9130.[MT7]-RLAYVTYQDIR.3y6_1.heavy 514.623 / 795.399 62000.0 27.75119972229004 43 13 10 10 10 1.1913097950674199 56.37002942906001 0.0 3 0.906227793256902 3.9982658999879033 62000.0 117.77211394302849 0.0 - - - - - - - 333.0 124 7 E2F2 E2F transcription factor 2 3299 415 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9130.[MT7]-RLAYVTYQDIR.3b4_1.heavy 514.623 / 648.395 68667.0 27.75119972229004 43 13 10 10 10 1.1913097950674199 56.37002942906001 0.0 3 0.906227793256902 3.9982658999879033 68667.0 150.85623478958195 0.0 - - - - - - - 333.0 137 3 E2F2 E2F transcription factor 2 3301 415 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9130.[MT7]-RLAYVTYQDIR.3y4_1.heavy 514.623 / 531.289 76333.0 27.75119972229004 43 13 10 10 10 1.1913097950674199 56.37002942906001 0.0 3 0.906227793256902 3.9982658999879033 76333.0 88.47508860103628 0.0 - - - - - - - 333.0 152 4 E2F2 E2F transcription factor 2 3303 415 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9130.[MT7]-RLAYVTYQDIR.3y5_1.heavy 514.623 / 694.352 66000.0 27.75119972229004 43 13 10 10 10 1.1913097950674199 56.37002942906001 0.0 3 0.906227793256902 3.9982658999879033 66000.0 216.3867766987143 0.0 - - - - - - - 333.0 132 6 E2F2 E2F transcription factor 2 3305 416 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9035.[MT7]-DPVNQR.2y4_1.heavy 436.739 / 516.289 1760.0 14.79574966430664 43 20 10 5 8 12.187457178845746 8.205157034198567 0.040599822998046875 4 0.9974346481913485 24.361050769127694 1760.0 3.813333333333333 5.0 - - - - - - - 731.4285714285714 6 7 SHC4;SHC1 SHC (Src homology 2 domain containing) family, member 4;SHC (Src homology 2 domain containing) transforming protein 1 3307 416 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9035.[MT7]-DPVNQR.2b3_1.heavy 436.739 / 456.258 6080.0 14.79574966430664 43 20 10 5 8 12.187457178845746 8.205157034198567 0.040599822998046875 4 0.9974346481913485 24.361050769127694 6080.0 27.36 0.0 - - - - - - - 334.54545454545456 12 11 SHC4;SHC1 SHC (Src homology 2 domain containing) family, member 4;SHC (Src homology 2 domain containing) transforming protein 1 3309 416 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9035.[MT7]-DPVNQR.2y5_1.heavy 436.739 / 613.342 111515.0 14.79574966430664 43 20 10 5 8 12.187457178845746 8.205157034198567 0.040599822998046875 4 0.9974346481913485 24.361050769127694 111515.0 755.5774857954545 0.0 - - - - - - - 240.0 223 4 SHC4;SHC1 SHC (Src homology 2 domain containing) family, member 4;SHC (Src homology 2 domain containing) transforming protein 1 3311 416 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9035.[MT7]-DPVNQR.2b4_1.heavy 436.739 / 570.3 4160.0 14.79574966430664 43 20 10 5 8 12.187457178845746 8.205157034198567 0.040599822998046875 4 0.9974346481913485 24.361050769127694 4160.0 20.02 1.0 - - - - - - - 256.0 8 15 SHC4;SHC1 SHC (Src homology 2 domain containing) family, member 4;SHC (Src homology 2 domain containing) transforming protein 1 3313 417 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9131.[MT7]-ALTEPEAR.2b4_1.heavy 515.786 / 559.321 54355.0 19.74679946899414 50 20 10 10 10 6.432614235861991 15.545779108359618 0.0 3 0.9913286315333003 13.243544097557768 54355.0 65.987372447073 0.0 - - - - - - - 444.7142857142857 108 7 PLK1 polo-like kinase 1 3315 417 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9131.[MT7]-ALTEPEAR.2y6_1.heavy 515.786 / 702.342 45256.0 19.74679946899414 50 20 10 10 10 6.432614235861991 15.545779108359618 0.0 3 0.9913286315333003 13.243544097557768 45256.0 212.0182134555356 0.0 - - - - - - - 319.0 90 6 PLK1 polo-like kinase 1 3317 417 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9131.[MT7]-ALTEPEAR.2y2_1.heavy 515.786 / 246.156 121162.0 19.74679946899414 50 20 10 10 10 6.432614235861991 15.545779108359618 0.0 3 0.9913286315333003 13.243544097557768 121162.0 116.36919811331038 0.0 - - - - - - - 319.0 242 3 PLK1 polo-like kinase 1 3319 417 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9131.[MT7]-ALTEPEAR.2y7_1.heavy 515.786 / 815.426 51003.0 19.74679946899414 50 20 10 10 10 6.432614235861991 15.545779108359618 0.0 3 0.9913286315333003 13.243544097557768 51003.0 98.42221709402278 0.0 - - - - - - - 341.85714285714283 102 7 PLK1 polo-like kinase 1 3321 418 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9033.[MT7]-GLTYLR.2y4_1.heavy 433.764 / 552.314 30950.0 27.050649642944336 41 16 10 5 10 2.2577068607202344 38.01041816991066 0.04470062255859375 3 0.9634473217309601 6.435331550409017 30950.0 97.11371173778483 0.0 - - - - - - - 329.0 61 3 MAP2K1 mitogen-activated protein kinase kinase 1 3323 418 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9033.[MT7]-GLTYLR.2y5_1.heavy 433.764 / 665.398 47743.0 27.050649642944336 41 16 10 5 10 2.2577068607202344 38.01041816991066 0.04470062255859375 3 0.9634473217309601 6.435331550409017 47743.0 203.78268196724332 0.0 - - - - - - - 329.0 95 5 MAP2K1 mitogen-activated protein kinase kinase 1 3325 418 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9033.[MT7]-GLTYLR.2b4_1.heavy 433.764 / 579.326 62230.0 27.050649642944336 41 16 10 5 10 2.2577068607202344 38.01041816991066 0.04470062255859375 3 0.9634473217309601 6.435331550409017 62230.0 276.9611145190973 0.0 - - - - - - - 329.0 124 3 MAP2K1 mitogen-activated protein kinase kinase 1 3327 418 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9033.[MT7]-GLTYLR.2b5_1.heavy 433.764 / 692.41 15146.0 27.050649642944336 41 16 10 5 10 2.2577068607202344 38.01041816991066 0.04470062255859375 3 0.9634473217309601 6.435331550409017 15146.0 45.57079537018913 0.0 - - - - - - - 329.0 30 5 MAP2K1 mitogen-activated protein kinase kinase 1 3329 419 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9034.[MT7]-FDSSDR.2y4_1.heavy 435.707 / 464.21 76990.0 17.558300018310547 44 14 10 10 10 1.7807671421571627 47.249636546502096 0.0 3 0.9461824845993241 5.295821270550926 76990.0 164.36079593445578 0.0 - - - - - - - 206.0 153 7 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 3331 419 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9034.[MT7]-FDSSDR.2y5_1.heavy 435.707 / 579.237 55524.0 17.558300018310547 44 14 10 10 10 1.7807671421571627 47.249636546502096 0.0 3 0.9461824845993241 5.295821270550926 55524.0 82.99375332779289 0.0 - - - - - - - 330.2 111 5 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 3333 419 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9034.[MT7]-FDSSDR.2b4_1.heavy 435.707 / 581.269 6811.0 17.558300018310547 44 14 10 10 10 1.7807671421571627 47.249636546502096 0.0 3 0.9461824845993241 5.295821270550926 6811.0 3.166126857072405 10.0 - - - - - - - 619.0 134 2 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 3335 419 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9034.[MT7]-FDSSDR.2b5_1.heavy 435.707 / 696.296 57794.0 17.558300018310547 44 14 10 10 10 1.7807671421571627 47.249636546502096 0.0 3 0.9461824845993241 5.295821270550926 57794.0 99.90115037771517 0.0 - - - - - - - 309.5 115 4 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 3337 420 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9039.[MT7]-AAQVAK[MT7].2y4_1.heavy 438.281 / 589.379 22315.0 15.270700454711914 47 17 10 10 10 3.223116643282592 24.468267618971655 0.0 3 0.9753247926808646 7.840339549816413 22315.0 51.21300794719791 0.0 - - - - - - - 647.4285714285714 44 7 SMARCA4;CCNB2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4;cyclin B2 3339 420 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9039.[MT7]-AAQVAK[MT7].2y5_1.heavy 438.281 / 660.416 61365.0 15.270700454711914 47 17 10 10 10 3.223116643282592 24.468267618971655 0.0 3 0.9753247926808646 7.840339549816413 61365.0 25.2801326588719 0.0 - - - - - - - 290.6666666666667 122 3 SMARCA4;CCNB2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4;cyclin B2 3341 420 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9039.[MT7]-AAQVAK[MT7].2b4_1.heavy 438.281 / 514.311 24755.0 15.270700454711914 47 17 10 10 10 3.223116643282592 24.468267618971655 0.0 3 0.9753247926808646 7.840339549816413 24755.0 60.40432403352591 0.0 - - - - - - - 261.5 49 4 SMARCA4;CCNB2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4;cyclin B2 3343 420 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9039.[MT7]-AAQVAK[MT7].2y3_1.heavy 438.281 / 461.32 50731.0 15.270700454711914 47 17 10 10 10 3.223116643282592 24.468267618971655 0.0 3 0.9753247926808646 7.840339549816413 50731.0 105.25028686173265 0.0 - - - - - - - 261.5 101 6 SMARCA4;CCNB2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4;cyclin B2 3345 421 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A193.[MT7]-FQGLIEK[MT7].2y4_1.heavy 561.842 / 646.426 8667.0 29.710100173950195 39 13 8 10 8 0.8166243488204468 64.14610938161982 0.0 4 0.9109702337251833 4.105052708115545 8667.0 30.57716834614059 0.0 - - - - - - - 333.0 17 5 CDC25C cell division cycle 25 homolog C (S. pombe) 3347 421 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A193.[MT7]-FQGLIEK[MT7].2b4_1.heavy 561.842 / 590.342 24667.0 29.710100173950195 39 13 8 10 8 0.8166243488204468 64.14610938161982 0.0 4 0.9109702337251833 4.105052708115545 24667.0 48.67249457454836 0.0 - - - - - - - 333.0 49 4 CDC25C cell division cycle 25 homolog C (S. pombe) 3349 421 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A193.[MT7]-FQGLIEK[MT7].2y3_1.heavy 561.842 / 533.341 23667.0 29.710100173950195 39 13 8 10 8 0.8166243488204468 64.14610938161982 0.0 4 0.9109702337251833 4.105052708115545 23667.0 16.48940735183796 1.0 - - - - - - - 1142.7142857142858 47 7 CDC25C cell division cycle 25 homolog C (S. pombe) 3351 421 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A193.[MT7]-FQGLIEK[MT7].2y6_1.heavy 561.842 / 831.506 23333.0 29.710100173950195 39 13 8 10 8 0.8166243488204468 64.14610938161982 0.0 4 0.9109702337251833 4.105052708115545 23333.0 42.45031809595202 1.0 - - - - - - - 333.0 70 5 CDC25C cell division cycle 25 homolog C (S. pombe) 3353 422 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9037.[MT7]-GSIPISR.2y4_1.heavy 437.267 / 472.288 59846.0 20.88724994659424 46 20 10 6 10 7.118041491951434 14.048808244946699 0.03830146789550781 3 0.9959345176697844 19.349025026467267 59846.0 30.915851360082012 0.0 - - - - - - - 253.0 119 2 PKMYT1 protein kinase, membrane associated tyrosine/threonine 1 3355 422 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9037.[MT7]-GSIPISR.2y5_1.heavy 437.267 / 585.372 7828.0 20.88724994659424 46 20 10 6 10 7.118041491951434 14.048808244946699 0.03830146789550781 3 0.9959345176697844 19.349025026467267 7828.0 31.46353800597451 0.0 - - - - - - - 663.125 15 8 PKMYT1 protein kinase, membrane associated tyrosine/threonine 1 3357 422 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9037.[MT7]-GSIPISR.2y6_1.heavy 437.267 / 672.404 21716.0 20.88724994659424 46 20 10 6 10 7.118041491951434 14.048808244946699 0.03830146789550781 3 0.9959345176697844 19.349025026467267 21716.0 14.97458432304038 1.0 - - - - - - - 577.2857142857143 43 7 PKMYT1 protein kinase, membrane associated tyrosine/threonine 1 3359 422 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9037.[MT7]-GSIPISR.2b5_1.heavy 437.267 / 612.384 14393.0 20.88724994659424 46 20 10 6 10 7.118041491951434 14.048808244946699 0.03830146789550781 3 0.9959345176697844 19.349025026467267 14393.0 36.48126732673267 0.0 - - - - - - - 568.25 28 8 PKMYT1 protein kinase, membrane associated tyrosine/threonine 1 3361 423 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A194.[MT7]-FIVNTLK[MT7].2y4_1.heavy 561.86 / 619.39 55333.0 30.876100540161133 46 16 10 10 10 3.4278418089713747 23.316167670472417 0.0 3 0.9678279575934295 6.862016837889908 55333.0 76.59979858979854 0.0 - - - - - - - 333.0 110 6 RPA1 replication protein A1, 70kDa 3363 423 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A194.[MT7]-FIVNTLK[MT7].2y5_1.heavy 561.86 / 718.458 57667.0 30.876100540161133 46 16 10 10 10 3.4278418089713747 23.316167670472417 0.0 3 0.9678279575934295 6.862016837889908 57667.0 73.50054988747186 0.0 - - - - - - - 1208.125 115 8 RPA1 replication protein A1, 70kDa 3365 423 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A194.[MT7]-FIVNTLK[MT7].2y3_1.heavy 561.86 / 505.347 23000.0 30.876100540161133 46 16 10 10 10 3.4278418089713747 23.316167670472417 0.0 3 0.9678279575934295 6.862016837889908 23000.0 17.00387537284372 1.0 - - - - - - - 667.0 46 1 RPA1 replication protein A1, 70kDa 3367 423 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A194.[MT7]-FIVNTLK[MT7].2y6_1.heavy 561.86 / 831.542 49333.0 30.876100540161133 46 16 10 10 10 3.4278418089713747 23.316167670472417 0.0 3 0.9678279575934295 6.862016837889908 49333.0 182.86070215301572 0.0 - - - - - - - 333.0 98 5 RPA1 replication protein A1, 70kDa 3369 424 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9138.[MT7]-DSGSPNPAR.2b8_1.heavy 522.763 / 870.407 N/A N/A - - - - - - - - - 0.0 - - - - - - - MYC v-myc myelocytomatosis viral oncogene homolog (avian) 3371 424 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9138.[MT7]-DSGSPNPAR.2y8_1.heavy 522.763 / 785.39 N/A N/A - - - - - - - - - 0.0 - - - - - - - MYC v-myc myelocytomatosis viral oncogene homolog (avian) 3373 424 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9138.[MT7]-DSGSPNPAR.2y5_1.heavy 522.763 / 554.305 N/A N/A - - - - - - - - - 0.0 - - - - - - - MYC v-myc myelocytomatosis viral oncogene homolog (avian) 3375 424 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9138.[MT7]-DSGSPNPAR.2y6_1.heavy 522.763 / 641.336 N/A N/A - - - - - - - - - 0.0 - - - - - - - MYC v-myc myelocytomatosis viral oncogene homolog (avian) 3377 425 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 TNAA_ECO24.GLTFTYEPK.2y7.peptide 528.27 / 885.44 359667.0 29.265899658203125 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 359667.0 314.94161551297407 0.0 - - - - - - - 333.0 719 1 3379 425 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 TNAA_ECO24.GLTFTYEPK.2y6.peptide 528.27 / 784.39 392333.0 29.265899658203125 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 392333.0 594.6223260489754 0.0 - - - - - - - 333.0 784 3 3381 425 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 TNAA_ECO24.GLTFTYEPK.2y5.peptide 528.27 / 637.32 733186.0 29.265899658203125 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 733186.0 713.0021007913034 0.0 - - - - - - - 667.0 1466 2 3383 426 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9136.[MT7]-GQVGGTFAR.2y8_1.heavy 518.786 / 835.442 18093.0 20.551700592041016 42 20 2 10 10 6.871695678448098 14.552448868426021 0.0 3 0.9900590235652942 12.367656487384787 18093.0 63.47141129032258 0.0 - - - - - - - 372.0 36 10 POLA2 polymerase (DNA directed), alpha 2 (70kD subunit) 3385 426 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9136.[MT7]-GQVGGTFAR.2b6_1.heavy 518.786 / 644.348 11153.0 20.551700592041016 42 20 2 10 10 6.871695678448098 14.552448868426021 0.0 3 0.9900590235652942 12.367656487384787 11153.0 64.08477822580645 0.0 - - - - - - - 315.6363636363636 22 11 POLA2 polymerase (DNA directed), alpha 2 (70kD subunit) 3387 426 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9136.[MT7]-GQVGGTFAR.2y6_1.heavy 518.786 / 608.315 48330.0 20.551700592041016 42 20 2 10 10 6.871695678448098 14.552448868426021 0.0 3 0.9900590235652942 12.367656487384787 48330.0 127.86581113801452 0.0 - - - - - - - 425.14285714285717 96 7 POLA2 polymerase (DNA directed), alpha 2 (70kD subunit) 3389 426 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9136.[MT7]-GQVGGTFAR.2y7_1.heavy 518.786 / 707.383 N/A 20.551700592041016 42 20 2 10 10 6.871695678448098 14.552448868426021 0.0 3 0.9900590235652942 12.367656487384787 29989.0 13.346540372944268 1.0 - - - - - - - 248.0 216 1 POLA2 polymerase (DNA directed), alpha 2 (70kD subunit) 3391 427 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A190.[MT7]-SLLSGLLK[MT7].2y4_1.heavy 559.873 / 574.404 57170.0 37.81869888305664 50 20 10 10 10 7.959641179625002 12.563380401616449 0.0 3 0.9964239346544107 20.631468429669745 57170.0 98.98922980125836 1.0 - - - - - - - 775.0 114 8 AKT1 v-akt murine thymoma viral oncogene homolog 1 3393 427 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A190.[MT7]-SLLSGLLK[MT7].2y5_1.heavy 559.873 / 661.437 95347.0 37.81869888305664 50 20 10 10 10 7.959641179625002 12.563380401616449 0.0 3 0.9964239346544107 20.631468429669745 95347.0 189.96903030940751 0.0 - - - - - - - 332.57142857142856 190 7 AKT1 v-akt murine thymoma viral oncogene homolog 1 3395 427 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A190.[MT7]-SLLSGLLK[MT7].2y6_1.heavy 559.873 / 774.521 49224.0 37.81869888305664 50 20 10 10 10 7.959641179625002 12.563380401616449 0.0 3 0.9964239346544107 20.631468429669745 49224.0 306.45909677419354 0.0 - - - - - - - 291.0 98 4 AKT1 v-akt murine thymoma viral oncogene homolog 1 3397 427 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A190.[MT7]-SLLSGLLK[MT7].2y7_1.heavy 559.873 / 887.605 33527.0 37.81869888305664 50 20 10 10 10 7.959641179625002 12.563380401616449 0.0 3 0.9964239346544107 20.631468429669745 33527.0 114.153137942048 0.0 - - - - - - - 299.8181818181818 67 11 AKT1 v-akt murine thymoma viral oncogene homolog 1 3399 428 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9137.[MT7]-LRDMPDGTFLVR.3y7_1.heavy 521.953 / 807.436 7637.0 31.73419952392578 45 15 10 10 10 6.130402039623941 16.312143861633967 0.0 3 0.9582257516795107 6.017061818258606 7637.0 43.70572289156627 0.0 - - - - - - - 332.0 15 2 PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 3401 428 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9137.[MT7]-LRDMPDGTFLVR.3y6_1.heavy 521.953 / 692.409 23906.0 31.73419952392578 45 15 10 10 10 6.130402039623941 16.312143861633967 0.0 3 0.9582257516795107 6.017061818258606 23906.0 39.48330321285141 0.0 - - - - - - - 332.0 47 4 PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 3403 428 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9137.[MT7]-LRDMPDGTFLVR.3y4_1.heavy 521.953 / 534.34 16933.0 31.73419952392578 45 15 10 10 10 6.130402039623941 16.312143861633967 0.0 3 0.9582257516795107 6.017061818258606 16933.0 25.84152610441767 0.0 - - - - - - - 711.4285714285714 33 7 PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 3405 428 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9137.[MT7]-LRDMPDGTFLVR.3b3_1.heavy 521.953 / 529.321 5644.0 31.73419952392578 45 15 10 10 10 6.130402039623941 16.312143861633967 0.0 3 0.9582257516795107 6.017061818258606 5644.0 2.674245916830766 1.0 - - - - - - - 758.8571428571429 17 7 PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 3407 429 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9135.[MT7]-TC[CAM]GQGITR.2b4_1.heavy 518.77 / 591.268 4872.0 15.84469985961914 48 18 10 10 10 4.510512666907071 22.17042881481842 0.0 3 0.9811589637193466 8.976886399970223 4872.0 39.080213903743314 0.0 - - - - - - - 255.36363636363637 9 11 CCNA1 cyclin A1 3409 429 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9135.[MT7]-TC[CAM]GQGITR.2y6_1.heavy 518.77 / 631.352 13306.0 15.84469985961914 48 18 10 10 10 4.510512666907071 22.17042881481842 0.0 3 0.9811589637193466 8.976886399970223 13306.0 23.186225401514957 0.0 - - - - - - - 249.66666666666666 26 9 CCNA1 cyclin A1 3411 429 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9135.[MT7]-TC[CAM]GQGITR.2b5_1.heavy 518.77 / 648.289 12181.0 15.84469985961914 48 18 10 10 10 4.510512666907071 22.17042881481842 0.0 3 0.9811589637193466 8.976886399970223 12181.0 43.59818666666666 2.0 - - - - - - - 281.0 24 8 CCNA1 cyclin A1 3413 429 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9135.[MT7]-TC[CAM]GQGITR.2y7_1.heavy 518.77 / 791.383 34482.0 15.84469985961914 48 18 10 10 10 4.510512666907071 22.17042881481842 0.0 3 0.9811589637193466 8.976886399970223 34482.0 225.4713454621577 0.0 - - - - - - - 267.57142857142856 68 7 CCNA1 cyclin A1 3415 430 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9132.[MT7]-ELSPTEGR.2y5_1.heavy 516.776 / 559.284 33075.0 18.69230079650879 50 20 10 10 10 12.543547281552675 7.9722264966518885 0.0 3 0.9985318246422578 32.20477395348811 33075.0 63.1135142241811 0.0 - - - - - - - 297.6666666666667 66 9 HERC3 hect domain and RLD 3 3417 430 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9132.[MT7]-ELSPTEGR.2y6_1.heavy 516.776 / 646.315 29499.0 18.69230079650879 50 20 10 10 10 12.543547281552675 7.9722264966518885 0.0 3 0.9985318246422578 32.20477395348811 29499.0 73.94301742963037 0.0 - - - - - - - 391.0 58 8 HERC3 hect domain and RLD 3 3419 430 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9132.[MT7]-ELSPTEGR.2b5_1.heavy 516.776 / 672.369 4693.0 18.69230079650879 50 20 10 10 10 12.543547281552675 7.9722264966518885 0.0 3 0.9985318246422578 32.20477395348811 4693.0 23.877657828472827 0.0 - - - - - - - 324.8181818181818 9 11 HERC3 hect domain and RLD 3 3421 430 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9132.[MT7]-ELSPTEGR.2y7_1.heavy 516.776 / 759.399 43132.0 18.69230079650879 50 20 10 10 10 12.543547281552675 7.9722264966518885 0.0 3 0.9985318246422578 32.20477395348811 43132.0 124.95736017897092 0.0 - - - - - - - 447.0 86 3 HERC3 hect domain and RLD 3 3423 431 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A381.[MT7]-ETVEEQVSTTER.2y8_1.heavy 776.385 / 949.458 5939.0 21.705424308776855 43 17 10 6 10 2.978776603688559 33.570829002810086 0.037899017333984375 3 0.9700125878850661 7.108886472639239 5939.0 31.42145348837209 0.0 - - - - - - - 258.0 11 3 CUL4A cullin 4A 3425 431 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A381.[MT7]-ETVEEQVSTTER.2b4_1.heavy 776.385 / 603.311 6971.0 21.705424308776855 43 17 10 6 10 2.978776603688559 33.570829002810086 0.037899017333984375 3 0.9700125878850661 7.108886472639239 6971.0 9.583535279989622 0.0 - - - - - - - 258.0 13 4 CUL4A cullin 4A 3427 431 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A381.[MT7]-ETVEEQVSTTER.2y9_1.heavy 776.385 / 1078.5 7488.0 21.705424308776855 43 17 10 6 10 2.978776603688559 33.570829002810086 0.037899017333984375 3 0.9700125878850661 7.108886472639239 7488.0 49.33953488372093 0.0 - - - - - - - 258.0 14 2 CUL4A cullin 4A 3429 431 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A381.[MT7]-ETVEEQVSTTER.2y7_1.heavy 776.385 / 820.416 3873.0 21.705424308776855 43 17 10 6 10 2.978776603688559 33.570829002810086 0.037899017333984375 3 0.9700125878850661 7.108886472639239 3873.0 19.209072768192044 0.0 - - - - - - - 258.0 7 4 CUL4A cullin 4A 3431 432 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A263.[MT7]-LIEIENFK[MT7].2y4_1.heavy 647.386 / 681.369 71954.0 34.860599517822266 48 18 10 10 10 4.371335633370635 22.876303351452407 0.0 3 0.9846175907684948 9.937837810259452 71954.0 68.1412254115589 0.0 - - - - - - - 256.0 143 2 SMC1A structural maintenance of chromosomes 1A 3433 432 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A263.[MT7]-LIEIENFK[MT7].2b3_1.heavy 647.386 / 500.32 92183.0 34.860599517822266 48 18 10 10 10 4.371335633370635 22.876303351452407 0.0 3 0.9846175907684948 9.937837810259452 92183.0 101.85152947058025 0.0 - - - - - - - 704.0 184 4 SMC1A structural maintenance of chromosomes 1A 3435 432 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A263.[MT7]-LIEIENFK[MT7].2y3_1.heavy 647.386 / 552.326 42762.0 34.860599517822266 48 18 10 10 10 4.371335633370635 22.876303351452407 0.0 3 0.9846175907684948 9.937837810259452 42762.0 50.370231584821425 0.0 - - - - - - - 256.0 85 2 SMC1A structural maintenance of chromosomes 1A 3437 432 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A263.[MT7]-LIEIENFK[MT7].2y7_1.heavy 647.386 / 1036.58 66064.0 34.860599517822266 48 18 10 10 10 4.371335633370635 22.876303351452407 0.0 3 0.9846175907684948 9.937837810259452 66064.0 89.09117997559653 0.0 - - - - - - - 621.7142857142857 132 7 SMC1A structural maintenance of chromosomes 1A 3439 433 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9104.[MT7]-DIGRPK[MT7].2y4_1.heavy 487.305 / 601.39 4935.0 15.710100173950195 36 18 2 10 6 4.182516715044918 23.90904969734856 0.0 6 0.9814582564633667 9.049274118663215 4935.0 3.54695591844959 4.0 - - - - - - - 256.2 42 5 ANKRD13A;UBA3 ankyrin repeat domain 13A;ubiquitin-like modifier activating enzyme 3 3441 433 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9104.[MT7]-DIGRPK[MT7].2y5_1.heavy 487.305 / 714.474 8591.0 15.710100173950195 36 18 2 10 6 4.182516715044918 23.90904969734856 0.0 6 0.9814582564633667 9.049274118663215 8591.0 36.40920695225559 0.0 - - - - - - - 266.1818181818182 17 11 ANKRD13A;UBA3 ankyrin repeat domain 13A;ubiquitin-like modifier activating enzyme 3 3443 433 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9104.[MT7]-DIGRPK[MT7].2b4_1.heavy 487.305 / 586.343 2925.0 15.710100173950195 36 18 2 10 6 4.182516715044918 23.90904969734856 0.0 6 0.9814582564633667 9.049274118663215 2925.0 14.305327868852459 2.0 - - - - - - - 256.2 56 15 ANKRD13A;UBA3 ankyrin repeat domain 13A;ubiquitin-like modifier activating enzyme 3 3445 433 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9104.[MT7]-DIGRPK[MT7].2y3_1.heavy 487.305 / 544.369 1828.0 15.710100173950195 36 18 2 10 6 4.182516715044918 23.90904969734856 0.0 6 0.9814582564633667 9.049274118663215 1828.0 1.3004103967168263 7.0 - - - - - - - 274.5 7 8 ANKRD13A;UBA3 ankyrin repeat domain 13A;ubiquitin-like modifier activating enzyme 3 3447 434 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A160.[MT7]-TAVDTVFR.2y4_1.heavy 526.797 / 522.304 57667.0 27.704299926757812 46 16 10 10 10 2.1913666699181698 38.02193892781279 0.0 3 0.9625432525205021 6.356708947168727 57667.0 13.229226872941375 1.0 - - - - - - - 667.0 129 1 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 3449 434 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A160.[MT7]-TAVDTVFR.2y5_1.heavy 526.797 / 637.33 28333.0 27.704299926757812 46 16 10 10 10 2.1913666699181698 38.02193892781279 0.0 3 0.9625432525205021 6.356708947168727 28333.0 35.99896324711052 0.0 - - - - - - - 333.0 56 4 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 3451 434 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A160.[MT7]-TAVDTVFR.2b4_1.heavy 526.797 / 531.289 56000.0 27.704299926757812 46 16 10 10 10 2.1913666699181698 38.02193892781279 0.0 3 0.9625432525205021 6.356708947168727 56000.0 72.24000000000001 0.0 - - - - - - - 333.0 112 5 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 3453 434 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A160.[MT7]-TAVDTVFR.2y7_1.heavy 526.797 / 807.436 48333.0 27.704299926757812 46 16 10 10 10 2.1913666699181698 38.02193892781279 0.0 3 0.9625432525205021 6.356708947168727 48333.0 45.2002384096024 0.0 - - - - - - - 333.0 96 1 KLHL9;KLHL13 kelch-like 9 (Drosophila);kelch-like 13 (Drosophila) 3455 435 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A164.[MT7]-LIVDSVK[MT7].2y4_1.heavy 531.344 / 592.342 19667.0 27.989599227905273 47 17 10 10 10 2.539800400500128 39.37317278173056 0.0 3 0.9708669922723134 7.212896027997441 19667.0 26.340511409295353 1.0 - - - - - - - 333.0 40 3 RAD21 RAD21 homolog (S. pombe) 3457 435 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A164.[MT7]-LIVDSVK[MT7].2y5_1.heavy 531.344 / 691.411 26000.0 27.989599227905273 47 17 10 10 10 2.539800400500128 39.37317278173056 0.0 3 0.9708669922723134 7.212896027997441 26000.0 55.56082423904327 0.0 - - - - - - - 333.0 52 2 RAD21 RAD21 homolog (S. pombe) 3459 435 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A164.[MT7]-LIVDSVK[MT7].2b4_1.heavy 531.344 / 585.373 20333.0 27.989599227905273 47 17 10 10 10 2.539800400500128 39.37317278173056 0.0 3 0.9708669922723134 7.212896027997441 20333.0 77.52734765765766 0.0 - - - - - - - 333.0 40 2 RAD21 RAD21 homolog (S. pombe) 3461 435 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A164.[MT7]-LIVDSVK[MT7].2y6_1.heavy 531.344 / 804.495 30667.0 27.989599227905273 47 17 10 10 10 2.539800400500128 39.37317278173056 0.0 3 0.9708669922723134 7.212896027997441 30667.0 19.519157726103728 0.0 - - - - - - - 333.0 61 3 RAD21 RAD21 homolog (S. pombe) 3463 436 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A166.[MT7]-TPPLQSER.2y4_1.heavy 536.299 / 519.252 7584.0 18.966299533843994 42 17 10 5 10 3.8366105920769296 26.064672866856032 0.04640007019042969 3 0.9779800539843768 8.301452352065873 7584.0 4.403559591373439 0.0 - - - - - - - 689.0 15 2 FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 3465 436 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A166.[MT7]-TPPLQSER.2y5_1.heavy 536.299 / 632.336 3218.0 18.966299533843994 42 17 10 5 10 3.8366105920769296 26.064672866856032 0.04640007019042969 3 0.9779800539843768 8.301452352065873 3218.0 1.4008224129093776 2.0 - - - - - - - 276.0 8 5 FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 3467 436 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A166.[MT7]-TPPLQSER.2y6_1.heavy 536.299 / 729.389 15628.0 18.966299533843994 42 17 10 5 10 3.8366105920769296 26.064672866856032 0.04640007019042969 3 0.9779800539843768 8.301452352065873 15628.0 7.7685755272558294 1.0 - - - - - - - 287.5 46 4 FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 3469 436 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A166.[MT7]-TPPLQSER.2y7_1.heavy 536.299 / 826.442 78140.0 18.966299533843994 42 17 10 5 10 3.8366105920769296 26.064672866856032 0.04640007019042969 3 0.9779800539843768 8.301452352065873 78140.0 203.8730465054679 0.0 - - - - - - - 765.6666666666666 156 3 FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 3471 437 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A167.[MT7]-DVDLSQPR.2y5_1.heavy 537.289 / 600.346 54229.0 20.9822998046875 48 18 10 10 10 5.86396242244222 17.053315283414122 0.0 3 0.9861827052105803 10.486957837729921 54229.0 50.437132231012825 0.0 - - - - - - - 253.0 108 1 AIRE autoimmune regulator 3473 437 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A167.[MT7]-DVDLSQPR.2b4_1.heavy 537.289 / 587.316 10390.0 20.9822998046875 48 18 10 10 10 5.86396242244222 17.053315283414122 0.0 3 0.9861827052105803 10.486957837729921 10390.0 12.809954665273247 1.0 - - - - - - - 582.9 45 10 AIRE autoimmune regulator 3475 437 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A167.[MT7]-DVDLSQPR.2y6_1.heavy 537.289 / 715.373 23313.0 20.9822998046875 48 18 10 10 10 5.86396242244222 17.053315283414122 0.0 3 0.9861827052105803 10.486957837729921 23313.0 80.59615852375049 0.0 - - - - - - - 253.0 46 4 AIRE autoimmune regulator 3477 437 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A167.[MT7]-DVDLSQPR.2y7_1.heavy 537.289 / 814.442 35477.0 20.9822998046875 48 18 10 10 10 5.86396242244222 17.053315283414122 0.0 3 0.9861827052105803 10.486957837729921 35477.0 57.87689454991069 0.0 - - - - - - - 253.0 70 4 AIRE autoimmune regulator 3479 438 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A10724.[MT7]-DLELPLSPSLLGGPGPER.3y7_1.heavy 664.369 / 669.331 59709.0 39.543701171875 45 15 10 10 10 1.7565154659743614 40.95472261399985 0.0 3 0.9599431962667326 6.145592418694463 59709.0 67.51638290398125 0.0 - - - - - - - 298.3333333333333 119 6 ELK1 ELK1, member of ETS oncogene family 3481 438 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A10724.[MT7]-DLELPLSPSLLGGPGPER.3b4_1.heavy 664.369 / 615.347 45067.0 39.543701171875 45 15 10 10 10 1.7565154659743614 40.95472261399985 0.0 3 0.9599431962667326 6.145592418694463 45067.0 70.71886053602952 0.0 - - - - - - - 1185.5714285714287 90 7 ELK1 ELK1, member of ETS oncogene family 3483 438 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A10724.[MT7]-DLELPLSPSLLGGPGPER.3b3_1.heavy 664.369 / 502.263 30749.0 39.543701171875 45 15 10 10 10 1.7565154659743614 40.95472261399985 0.0 3 0.9599431962667326 6.145592418694463 30749.0 49.75532227422491 0.0 - - - - - - - 422.8 61 5 ELK1 ELK1, member of ETS oncogene family 3485 438 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A10724.[MT7]-DLELPLSPSLLGGPGPER.3y8_1.heavy 664.369 / 782.416 23103.0 39.543701171875 45 15 10 10 10 1.7565154659743614 40.95472261399985 0.0 3 0.9599431962667326 6.145592418694463 23103.0 40.40959686862582 0.0 - - - - - - - 325.4 46 10 ELK1 ELK1, member of ETS oncogene family 3487 439 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A265.[MT7]-SAWYMGPVSR.2y8_1.heavy 649.328 / 995.477 10926.0 31.488399505615234 48 18 10 10 10 4.928014096424107 20.292149747007127 0.0 3 0.9832494411861777 9.522251032379094 10926.0 35.45925302831642 0.0 - - - - - - - 331.0 21 6 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 3489 439 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A265.[MT7]-SAWYMGPVSR.2y5_1.heavy 649.328 / 515.294 11919.0 31.488399505615234 48 18 10 10 10 4.928014096424107 20.292149747007127 0.0 3 0.9832494411861777 9.522251032379094 11919.0 23.189836858006043 0.0 - - - - - - - 882.6666666666666 23 6 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 3491 439 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A265.[MT7]-SAWYMGPVSR.2y6_1.heavy 649.328 / 646.334 12250.0 31.488399505615234 48 18 10 10 10 4.928014096424107 20.292149747007127 0.0 3 0.9832494411861777 9.522251032379094 12250.0 25.72129909365559 0.0 - - - - - - - 331.0 24 5 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 3493 439 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A265.[MT7]-SAWYMGPVSR.2y7_1.heavy 649.328 / 809.397 12912.0 31.488399505615234 48 18 10 10 10 4.928014096424107 20.292149747007127 0.0 3 0.9832494411861777 9.522251032379094 12912.0 10.899498854396885 0.0 - - - - - - - 331.0 25 3 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 3495 440 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A267.[MT7]-ALASAAGQTPK[MT7].3b6_1.heavy 434.926 / 629.374 40702.0 19.838499069213867 48 18 10 10 10 8.538283651556174 11.711955713930184 0.0 3 0.9856297211340298 10.282727300199191 40702.0 60.218178456550916 0.0 - - - - - - - 289.2 81 5 E2F2 E2F transcription factor 2 3497 440 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A267.[MT7]-ALASAAGQTPK[MT7].3b4_1.heavy 434.926 / 487.3 32273.0 19.838499069213867 48 18 10 10 10 8.538283651556174 11.711955713930184 0.0 3 0.9856297211340298 10.282727300199191 32273.0 71.26610647608078 0.0 - - - - - - - 401.6666666666667 64 6 E2F2 E2F transcription factor 2 3499 440 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A267.[MT7]-ALASAAGQTPK[MT7].3b5_1.heavy 434.926 / 558.337 79477.0 19.838499069213867 48 18 10 10 10 8.538283651556174 11.711955713930184 0.0 3 0.9856297211340298 10.282727300199191 79477.0 120.1396511627907 0.0 - - - - - - - 1204.0 158 7 E2F2 E2F transcription factor 2 3501 440 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A267.[MT7]-ALASAAGQTPK[MT7].3y2_1.heavy 434.926 / 388.268 228317.0 19.838499069213867 48 18 10 10 10 8.538283651556174 11.711955713930184 0.0 3 0.9856297211340298 10.282727300199191 228317.0 184.45159181401425 0.0 - - - - - - - 482.0 456 1 E2F2 E2F transcription factor 2 3503 441 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A10729.[MT7]-DLFTQR.2b3_1.heavy 462.257 / 520.289 7358.0 26.185100555419922 47 20 9 10 8 17.828347987048765 5.609044655884216 0.0 4 0.9987476290724735 34.86988746983068 7358.0 11.1749625 1.0 - - - - - - - 782.2222222222222 55 9 CDC25A cell division cycle 25 homolog A (S. pombe) 3505 441 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A10729.[MT7]-DLFTQR.2y4_1.heavy 462.257 / 551.294 11197.0 26.185100555419922 47 20 9 10 8 17.828347987048765 5.609044655884216 0.0 4 0.9987476290724735 34.86988746983068 11197.0 15.3083984375 0.0 - - - - - - - 777.1428571428571 22 7 CDC25A cell division cycle 25 homolog A (S. pombe) 3507 441 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A10729.[MT7]-DLFTQR.2y5_1.heavy 462.257 / 664.378 23033.0 26.185100555419922 47 20 9 10 8 17.828347987048765 5.609044655884216 0.0 4 0.9987476290724735 34.86988746983068 23033.0 46.78578125 0.0 - - - - - - - 320.0 46 6 CDC25A cell division cycle 25 homolog A (S. pombe) 3509 441 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A10729.[MT7]-DLFTQR.2b4_1.heavy 462.257 / 621.336 2559.0 26.185100555419922 47 20 9 10 8 17.828347987048765 5.609044655884216 0.0 4 0.9987476290724735 34.86988746983068 2559.0 1.309648690951719 12.0 - - - - - - - 868.5714285714286 20 7 CDC25A cell division cycle 25 homolog A (S. pombe) 3511 442 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9111.[MT7]-ASVTTPK[MT7].2y4_1.heavy 496.305 / 590.363 43770.0 17.040900230407715 42 17 10 5 10 3.2195817412597467 31.05993512091181 0.04860115051269531 3 0.9782926637781041 8.361233332278251 43770.0 138.99441174661115 0.0 - - - - - - - 293.3636363636364 87 11 HERC2 hect domain and RLD 2 3513 442 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9111.[MT7]-ASVTTPK[MT7].2y5_1.heavy 496.305 / 689.431 10489.0 17.040900230407715 42 17 10 5 10 3.2195817412597467 31.05993512091181 0.04860115051269531 3 0.9782926637781041 8.361233332278251 10489.0 28.94827364896003 0.0 - - - - - - - 322.6 20 10 HERC2 hect domain and RLD 2 3515 442 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9111.[MT7]-ASVTTPK[MT7].2b4_1.heavy 496.305 / 503.295 10892.0 17.040900230407715 42 17 10 5 10 3.2195817412597467 31.05993512091181 0.04860115051269531 3 0.9782926637781041 8.361233332278251 10892.0 22.40244972447477 2.0 - - - - - - - 691.5714285714286 21 7 HERC2 hect domain and RLD 2 3517 442 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9111.[MT7]-ASVTTPK[MT7].2y6_1.heavy 496.305 / 776.463 29247.0 17.040900230407715 42 17 10 5 10 3.2195817412597467 31.05993512091181 0.04860115051269531 3 0.9782926637781041 8.361233332278251 29247.0 41.746486730973054 0.0 - - - - - - - 302.5 58 4 HERC2 hect domain and RLD 2 3519 443 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9112.[MT7]-SELVQK[MT7].2y4_1.heavy 496.305 / 631.426 23793.0 19.591350555419922 45 20 10 5 10 31.249239240273976 3.2000779036924567 0.044300079345703125 3 0.9967464028075836 21.63030560967507 23793.0 73.14514705882353 0.0 - - - - - - - 309.4 47 10 YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide 3521 443 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9112.[MT7]-SELVQK[MT7].2y5_1.heavy 496.305 / 760.469 19272.0 19.591350555419922 45 20 10 5 10 31.249239240273976 3.2000779036924567 0.044300079345703125 3 0.9967464028075836 21.63030560967507 19272.0 24.410821170573495 0.0 - - - - - - - 357.0 38 2 YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide 3523 443 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9112.[MT7]-SELVQK[MT7].2b4_1.heavy 496.305 / 573.336 25221.0 19.591350555419922 45 20 10 5 10 31.249239240273976 3.2000779036924567 0.044300079345703125 3 0.9967464028075836 21.63030560967507 25221.0 64.17630299200484 0.0 - - - - - - - 297.5 50 8 YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide 3525 443 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9112.[MT7]-SELVQK[MT7].2y3_1.heavy 496.305 / 518.342 32834.0 19.591350555419922 45 20 10 5 10 31.249239240273976 3.2000779036924567 0.044300079345703125 3 0.9967464028075836 21.63030560967507 32834.0 45.27978091236494 0.0 - - - - - - - 297.5 65 8 YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide 3527 444 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A271.[MT7]-LLSEDTDSQR.2y8_1.heavy 654.332 / 937.386 11046.0 23.4955997467041 43 13 10 10 10 1.3173237992811389 50.45116902626241 0.0 3 0.9137298127940652 4.171182457328304 11046.0 49.29532928705051 0.0 - - - - - - - 283.0 22 6 E2F1 E2F transcription factor 1 3529 444 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A271.[MT7]-LLSEDTDSQR.2y9_1.heavy 654.332 / 1050.47 10762.0 23.4955997467041 43 13 10 10 10 1.3173237992811389 50.45116902626241 0.0 3 0.9137298127940652 4.171182457328304 10762.0 21.33665258293962 0.0 - - - - - - - 283.0 21 4 E2F1 E2F transcription factor 1 3531 444 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A271.[MT7]-LLSEDTDSQR.2y6_1.heavy 654.332 / 721.311 3682.0 23.4955997467041 43 13 10 10 10 1.3173237992811389 50.45116902626241 0.0 3 0.9137298127940652 4.171182457328304 3682.0 6.065235242199263 0.0 - - - - - - - 283.0 7 3 E2F1 E2F transcription factor 1 3533 444 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A271.[MT7]-LLSEDTDSQR.2b7_1.heavy 654.332 / 918.454 4248.0 23.4955997467041 43 13 10 10 10 1.3173237992811389 50.45116902626241 0.0 3 0.9137298127940652 4.171182457328304 4248.0 9.90434675756848 0.0 - - - - - - - 283.0 8 5 E2F1 E2F transcription factor 1 3535 445 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9115.[MT7]-FLQTAK[MT7].2b3_1.heavy 498.31 / 533.32 30196.0 24.620800018310547 45 15 10 10 10 3.1694421004395745 31.55129414925449 0.0 3 0.9592749010587572 6.09461499117577 30196.0 59.988040133779265 0.0 - - - - - - - 784.875 60 8 MID1 midline 1 (Opitz/BBB syndrome) 3537 445 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9115.[MT7]-FLQTAK[MT7].2y4_1.heavy 498.31 / 591.358 52619.0 24.620800018310547 45 15 10 10 10 3.1694421004395745 31.55129414925449 0.0 3 0.9592749010587572 6.09461499117577 52619.0 128.76109810479375 0.0 - - - - - - - 683.4285714285714 105 7 MID1 midline 1 (Opitz/BBB syndrome) 3539 445 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9115.[MT7]-FLQTAK[MT7].2y5_1.heavy 498.31 / 704.442 72351.0 24.620800018310547 45 15 10 10 10 3.1694421004395745 31.55129414925449 0.0 3 0.9592749010587572 6.09461499117577 72351.0 232.29752508361202 0.0 - - - - - - - 299.0 144 3 MID1 midline 1 (Opitz/BBB syndrome) 3541 445 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9115.[MT7]-FLQTAK[MT7].2y1_1.heavy 498.31 / 291.215 N/A 24.620800018310547 45 15 10 10 10 3.1694421004395745 31.55129414925449 0.0 3 0.9592749010587572 6.09461499117577 41557.0 12.98400759885894 4.0 - - - - - - - 1196.0 138 1 MID1 midline 1 (Opitz/BBB syndrome) 3543 446 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9114.[MT7]-ASQYNIR.2y5_1.heavy 498.273 / 693.368 11733.0 19.79290008544922 48 18 10 10 10 7.411160046276543 13.493164278680126 0.0 3 0.9885644702242238 11.52973934407293 11733.0 63.29799818310462 0.0 - - - - - - - 335.0 23 10 UBA3 ubiquitin-like modifier activating enzyme 3 3545 446 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9114.[MT7]-ASQYNIR.2b4_1.heavy 498.273 / 594.3 16283.0 19.79290008544922 48 18 10 10 10 7.411160046276543 13.493164278680126 0.0 3 0.9885644702242238 11.52973934407293 16283.0 28.34436845064597 0.0 - - - - - - - 431.0 32 5 UBA3 ubiquitin-like modifier activating enzyme 3 3547 446 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9114.[MT7]-ASQYNIR.2y6_1.heavy 498.273 / 780.4 71596.0 19.79290008544922 48 18 10 10 10 7.411160046276543 13.493164278680126 0.0 3 0.9885644702242238 11.52973934407293 71596.0 309.16065951518794 0.0 - - - - - - - 299.0 143 8 UBA3 ubiquitin-like modifier activating enzyme 3 3549 446 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9114.[MT7]-ASQYNIR.2b5_1.heavy 498.273 / 708.343 31368.0 19.79290008544922 48 18 10 10 10 7.411160046276543 13.493164278680126 0.0 3 0.9885644702242238 11.52973934407293 31368.0 75.58027855153202 0.0 - - - - - - - 341.85714285714283 62 7 UBA3 ubiquitin-like modifier activating enzyme 3 3551 447 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9116.[MT7]-EVLPGAK[MT7].2y4_1.heavy 501.315 / 516.326 224781.0 21.959500312805176 46 20 10 6 10 12.477476653513712 8.014440962455302 0.03740119934082031 3 0.9979009160558683 26.93217754221868 224781.0 354.06657738745844 0.0 - - - - - - - 261.0 449 4 PIAS3 protein inhibitor of activated STAT, 3 3553 447 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9116.[MT7]-EVLPGAK[MT7].2y5_1.heavy 501.315 / 629.41 41820.0 21.959500312805176 46 20 10 6 10 12.477476653513712 8.014440962455302 0.03740119934082031 3 0.9979009160558683 26.93217754221868 41820.0 38.882403424261824 0.0 - - - - - - - 261.0 83 6 PIAS3 protein inhibitor of activated STAT, 3 3555 447 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9116.[MT7]-EVLPGAK[MT7].2y6_1.heavy 501.315 / 728.479 18557.0 21.959500312805176 46 20 10 6 10 12.477476653513712 8.014440962455302 0.03740119934082031 3 0.9979009160558683 26.93217754221868 18557.0 19.290758928571428 0.0 - - - - - - - 261.0 37 5 PIAS3 protein inhibitor of activated STAT, 3 3557 447 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9116.[MT7]-EVLPGAK[MT7].2b5_1.heavy 501.315 / 640.379 1830.0 21.959500312805176 46 20 10 6 10 12.477476653513712 8.014440962455302 0.03740119934082031 3 0.9979009160558683 26.93217754221868 1830.0 4.470456306997146 7.0 - - - - - - - 261.0 16 5 PIAS3 protein inhibitor of activated STAT, 3 3559 448 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A171.[MT7]-DLASPLIGR.2y8_1.heavy 543.325 / 826.515 11667.0 29.612499237060547 43 13 10 10 10 1.8831655186273155 36.51915501060663 0.0 3 0.9237674524502175 4.441133368237235 11667.0 28.674582368815592 0.0 - - - - - - - 333.0 23 3 CCNB2 cyclin B2 3561 448 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A171.[MT7]-DLASPLIGR.2b6_1.heavy 543.325 / 741.426 3000.0 29.612499237060547 43 13 10 10 10 1.8831655186273155 36.51915501060663 0.0 3 0.9237674524502175 4.441133368237235 3000.0 8.531086959165556 1.0 - - - - - - - 333.0 13 3 CCNB2 cyclin B2 3563 448 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A171.[MT7]-DLASPLIGR.2y6_1.heavy 543.325 / 642.393 13000.0 29.612499237060547 43 13 10 10 10 1.8831655186273155 36.51915501060663 0.0 3 0.9237674524502175 4.441133368237235 13000.0 2.358500525944806 0.0 - - - - - - - 333.0 26 2 CCNB2 cyclin B2 3565 448 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A171.[MT7]-DLASPLIGR.2y7_1.heavy 543.325 / 713.43 12000.0 29.612499237060547 43 13 10 10 10 1.8831655186273155 36.51915501060663 0.0 3 0.9237674524502175 4.441133368237235 12000.0 29.21136431784108 0.0 - - - - - - - 333.0 24 8 CCNB2 cyclin B2 3567 449 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A170.[MT7]-AAAPAALTPR.2y8_1.heavy 541.826 / 796.468 9051.0 22.265999794006348 43 17 10 6 10 4.50204746373688 22.212115888488654 0.03980064392089844 3 0.9752883176318801 7.834527114772437 9051.0 16.332631578947368 0.0 - - - - - - - 266.0 18 2 AIRE autoimmune regulator 3569 449 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A170.[MT7]-AAAPAALTPR.2y9_1.heavy 541.826 / 867.505 23427.0 22.265999794006348 43 17 10 6 10 4.50204746373688 22.212115888488654 0.03980064392089844 3 0.9752883176318801 7.834527114772437 23427.0 105.66669416498993 0.0 - - - - - - - 266.0 46 4 AIRE autoimmune regulator 3571 449 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A170.[MT7]-AAAPAALTPR.2b5_1.heavy 541.826 / 526.311 3461.0 22.265999794006348 43 17 10 6 10 4.50204746373688 22.212115888488654 0.03980064392089844 3 0.9752883176318801 7.834527114772437 3461.0 1.017031934877896 6.0 - - - - - - - 1103.0 6 7 AIRE autoimmune regulator 3573 449 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A170.[MT7]-AAAPAALTPR.2y7_1.heavy 541.826 / 725.43 56704.0 22.265999794006348 43 17 10 6 10 4.50204746373688 22.212115888488654 0.03980064392089844 3 0.9752883176318801 7.834527114772437 56704.0 146.9519861260966 0.0 - - - - - - - 266.0 113 5 AIRE autoimmune regulator 3575 450 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A173.[MT7]-ITIPDIK[MT7].2y4_1.heavy 544.352 / 616.379 112305.0 32.10752487182617 41 18 10 5 8 3.2572578725677284 30.70067029147097 0.0478973388671875 4 0.9885527980610218 11.523848427296805 112305.0 108.67655159139352 0.0 - - - - - - - 318.0 224 3 CHEK1 CHK1 checkpoint homolog (S. pombe) 3577 450 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A173.[MT7]-ITIPDIK[MT7].2y5_1.heavy 544.352 / 729.463 6045.0 32.10752487182617 41 18 10 5 8 3.2572578725677284 30.70067029147097 0.0478973388671875 4 0.9885527980610218 11.523848427296805 6045.0 22.04855377536378 1.0 - - - - - - - 318.0 55 3 CHEK1 CHK1 checkpoint homolog (S. pombe) 3579 450 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A173.[MT7]-ITIPDIK[MT7].2y3_1.heavy 544.352 / 519.326 5408.0 32.10752487182617 41 18 10 5 8 3.2572578725677284 30.70067029147097 0.0478973388671875 4 0.9885527980610218 11.523848427296805 5408.0 18.025903025476357 1.0 - - - - - - - 318.0 24 4 CHEK1 CHK1 checkpoint homolog (S. pombe) 3581 450 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A173.[MT7]-ITIPDIK[MT7].2y6_1.heavy 544.352 / 830.51 18770.0 32.10752487182617 41 18 10 5 8 3.2572578725677284 30.70067029147097 0.0478973388671875 4 0.9885527980610218 11.523848427296805 18770.0 77.02783018867925 0.0 - - - - - - - 318.0 37 3 CHEK1 CHK1 checkpoint homolog (S. pombe) 3583 451 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A179.[MT7]-VEELEGER.2b3_1.heavy 552.786 / 502.263 14696.0 22.568700790405273 45 20 9 10 6 5.486484196449631 18.22660859293301 0.0 6 0.9952807206742695 17.957818745831915 14696.0 11.354345897760414 0.0 - - - - - - - 610.5714285714286 29 7 MAD1L1 MAD1 mitotic arrest deficient-like 1 (yeast) 3585 451 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A179.[MT7]-VEELEGER.2y5_1.heavy 552.786 / 603.31 9887.0 22.568700790405273 45 20 9 10 6 5.486484196449631 18.22660859293301 0.0 6 0.9952807206742695 17.957818745831915 9887.0 15.905682332988857 1.0 - - - - - - - 748.4 26 10 MAD1L1 MAD1 mitotic arrest deficient-like 1 (yeast) 3587 451 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A179.[MT7]-VEELEGER.2y6_1.heavy 552.786 / 732.352 11223.0 22.568700790405273 45 20 9 10 6 5.486484196449631 18.22660859293301 0.0 6 0.9952807206742695 17.957818745831915 11223.0 22.390024937655863 2.0 - - - - - - - 725.4285714285714 37 7 MAD1L1 MAD1 mitotic arrest deficient-like 1 (yeast) 3589 451 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A179.[MT7]-VEELEGER.2y7_1.heavy 552.786 / 861.395 29393.0 22.568700790405273 45 20 9 10 6 5.486484196449631 18.22660859293301 0.0 6 0.9952807206742695 17.957818745831915 29393.0 154.12059925093632 1.0 - - - - - - - 267.0 70 5 MAD1L1 MAD1 mitotic arrest deficient-like 1 (yeast) 3591 452 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A178.[MT7]-TRPNLSK[MT7].3y3_1.heavy 368.564 / 491.331 N/A 16.855932871500652 45 20 10 5 10 7.464688162092184 13.396406899866028 0.04820060729980469 3 0.9917149952797251 13.54926350132517 124229.0 75.10808106162095 0.0 - - - - - - - 595.0 248 2 UBA3 ubiquitin-like modifier activating enzyme 3 3593 452 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A178.[MT7]-TRPNLSK[MT7].3y5_1.heavy 368.564 / 702.427 10518.0 16.855932871500652 45 20 10 5 10 7.464688162092184 13.396406899866028 0.04820060729980469 3 0.9917149952797251 13.54926350132517 10518.0 73.77291962445615 0.0 - - - - - - - 231.16666666666666 21 6 UBA3 ubiquitin-like modifier activating enzyme 3 3595 452 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A178.[MT7]-TRPNLSK[MT7].3b4_1.heavy 368.564 / 613.354 6549.0 16.855932871500652 45 20 10 5 10 7.464688162092184 13.396406899866028 0.04820060729980469 3 0.9917149952797251 13.54926350132517 6549.0 40.00083810396153 0.0 - - - - - - - 198.0 13 3 UBA3 ubiquitin-like modifier activating enzyme 3 3597 452 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A178.[MT7]-TRPNLSK[MT7].3y2_1.heavy 368.564 / 378.247 121847.0 16.855932871500652 45 20 10 5 10 7.464688162092184 13.396406899866028 0.04820060729980469 3 0.9917149952797251 13.54926350132517 121847.0 82.1337240460715 0.0 - - - - - - - 397.0 243 1 UBA3 ubiquitin-like modifier activating enzyme 3 3599 453 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9107.[MT7]-RLEVWGQPAK[MT7].3b6_1.heavy 491.292 / 885.506 16003.0 26.411100387573242 47 17 10 10 10 3.807578350595086 26.26341227735235 0.0 3 0.9739279871108644 7.6265297409264505 16003.0 48.309093749999995 1.0 - - - - - - - 320.0 32 5 UBOX5 U-box domain containing 5 3601 453 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9107.[MT7]-RLEVWGQPAK[MT7].3b4_1.heavy 491.292 / 642.406 27525.0 26.411100387573242 47 17 10 10 10 3.807578350595086 26.26341227735235 0.0 3 0.9739279871108644 7.6265297409264505 27525.0 53.3296875 0.0 - - - - - - - 320.0 55 3 UBOX5 U-box domain containing 5 3603 453 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9107.[MT7]-RLEVWGQPAK[MT7].3b3_1.heavy 491.292 / 543.337 30725.0 26.411100387573242 47 17 10 10 10 3.807578350595086 26.26341227735235 0.0 3 0.9739279871108644 7.6265297409264505 30725.0 67.2109375 0.0 - - - - - - - 320.0 61 2 UBOX5 U-box domain containing 5 3605 453 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A9107.[MT7]-RLEVWGQPAK[MT7].3b7_1.heavy 491.292 / 1013.56 960.0 26.411100387573242 47 17 10 10 10 3.807578350595086 26.26341227735235 0.0 3 0.9739279871108644 7.6265297409264505 960.0 -0.0 0.0 - - - - - - - 0.0 1 0 UBOX5 U-box domain containing 5 3607 454 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A277.[MT7]-EFFLLLLK[MT7].2y4_1.heavy 655.92 / 630.467 23881.0 47.57864952087402 40 14 10 6 10 8.158745402343596 12.256786438178967 0.034702301025390625 3 0.942691679915153 5.130472116799046 23881.0 115.55115211714985 0.0 - - - - - - - 204.71428571428572 47 14 HERC3 hect domain and RLD 3 3609 454 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A277.[MT7]-EFFLLLLK[MT7].2b3_1.heavy 655.92 / 568.289 21809.0 47.57864952087402 40 14 10 6 10 8.158745402343596 12.256786438178967 0.034702301025390625 3 0.942691679915153 5.130472116799046 21809.0 155.46324222124974 0.0 - - - - - - - 249.85 43 20 HERC3 hect domain and RLD 3 3611 454 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A277.[MT7]-EFFLLLLK[MT7].2b4_1.heavy 655.92 / 681.373 24246.0 47.57864952087402 40 14 10 6 10 8.158745402343596 12.256786438178967 0.034702301025390625 3 0.942691679915153 5.130472116799046 24246.0 223.98609728371426 0.0 - - - - - - - 257.9230769230769 48 13 HERC3 hect domain and RLD 3 3613 454 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A277.[MT7]-EFFLLLLK[MT7].2y3_1.heavy 655.92 / 517.383 23941.0 47.57864952087402 40 14 10 6 10 8.158745402343596 12.256786438178967 0.034702301025390625 3 0.942691679915153 5.130472116799046 23941.0 83.32941337460542 0.0 - - - - - - - 617.7142857142857 47 7 HERC3 hect domain and RLD 3 3615 455 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A10739.[MT7]-EFVIIDC[CAM]R.2b3_1.heavy 598.317 / 520.289 10452.0 31.878599166870117 47 17 10 10 10 3.4061465741087646 29.358689599599952 0.0 3 0.9719907532575714 7.356863882131249 10452.0 14.845758039816232 2.0 - - - - - - - 327.0 20 3 CDC25A cell division cycle 25 homolog A (S. pombe) 3617 455 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A10739.[MT7]-EFVIIDC[CAM]R.2b4_1.heavy 598.317 / 633.373 8165.0 31.878599166870117 47 17 10 10 10 3.4061465741087646 29.358689599599952 0.0 3 0.9719907532575714 7.356863882131249 8165.0 5.816669285843404 1.0 - - - - - - - 327.0 17 4 CDC25A cell division cycle 25 homolog A (S. pombe) 3619 455 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A10739.[MT7]-EFVIIDC[CAM]R.2y6_1.heavy 598.317 / 775.413 6859.0 31.878599166870117 47 17 10 10 10 3.4061465741087646 29.358689599599952 0.0 3 0.9719907532575714 7.356863882131249 6859.0 7.3191078972271315 0.0 - - - - - - - 327.0 13 6 CDC25A cell division cycle 25 homolog A (S. pombe) 3621 455 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A10739.[MT7]-EFVIIDC[CAM]R.2y7_1.heavy 598.317 / 922.482 9798.0 31.878599166870117 47 17 10 10 10 3.4061465741087646 29.358689599599952 0.0 3 0.9719907532575714 7.356863882131249 9798.0 33.96554390563565 0.0 - - - - - - - 327.0 19 3 CDC25A cell division cycle 25 homolog A (S. pombe) 3623 456 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A282.[MT7]-QYQIDAAIVR.2y8_1.heavy 660.873 / 885.515 13000.0 28.8617000579834 45 15 10 10 10 2.5857250363380313 32.00960038025952 0.0 3 0.9595248090378223 6.113530424196524 13000.0 57.163220191705946 0.0 - - - - - - - 333.0 26 2 CUL4B;CUL4A cullin 4B;cullin 4A 3625 456 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A282.[MT7]-QYQIDAAIVR.2y5_1.heavy 660.873 / 529.346 17000.0 28.8617000579834 45 15 10 10 10 2.5857250363380313 32.00960038025952 0.0 3 0.9595248090378223 6.113530424196524 17000.0 67.37054054054053 0.0 - - - - - - - 333.0 34 7 CUL4B;CUL4A cullin 4B;cullin 4A 3627 456 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A282.[MT7]-QYQIDAAIVR.2y9_1.heavy 660.873 / 1048.58 21000.0 28.8617000579834 45 15 10 10 10 2.5857250363380313 32.00960038025952 0.0 3 0.9595248090378223 6.113530424196524 21000.0 43.03583208395802 0.0 - - - - - - - 333.0 42 4 CUL4B;CUL4A cullin 4B;cullin 4A 3629 456 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A282.[MT7]-QYQIDAAIVR.2y6_1.heavy 660.873 / 644.373 10333.0 28.8617000579834 45 15 10 10 10 2.5857250363380313 32.00960038025952 0.0 3 0.9595248090378223 6.113530424196524 10333.0 18.94701955708815 0.0 - - - - - - - 333.0 20 1 CUL4B;CUL4A cullin 4B;cullin 4A 3631 457 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A284.[MT7]-RTVLEEIGNR.3b6_1.heavy 444.257 / 872.496 3556.0 26.67729949951172 43 13 10 10 10 3.8122112307667635 26.231495042284593 0.0 3 0.9121542400165382 4.133046059285057 3556.0 6.458903339043446 1.0 - - - - - - - 323.0 9 1 CCNB2 cyclin B2 3633 457 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A284.[MT7]-RTVLEEIGNR.3b3_1.heavy 444.257 / 501.327 20364.0 26.67729949951172 43 13 10 10 10 3.8122112307667635 26.231495042284593 0.0 3 0.9121542400165382 4.133046059285057 20364.0 21.001392590004414 0.0 - - - - - - - 323.0 40 5 CCNB2 cyclin B2 3635 457 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A284.[MT7]-RTVLEEIGNR.3y4_1.heavy 444.257 / 459.267 49455.0 26.67729949951172 43 13 10 10 10 3.8122112307667635 26.231495042284593 0.0 3 0.9121542400165382 4.133046059285057 49455.0 111.98445549136638 0.0 - - - - - - - 767.5 98 8 CCNB2 cyclin B2 3637 457 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A284.[MT7]-RTVLEEIGNR.3y5_1.heavy 444.257 / 588.31 35879.0 26.67729949951172 43 13 10 10 10 3.8122112307667635 26.231495042284593 0.0 3 0.9121542400165382 4.133046059285057 35879.0 109.29055965116636 0.0 - - - - - - - 323.0 71 6 CCNB2 cyclin B2 3639 458 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A141.[MT7]-ILQDLK[MT7].2y4_1.heavy 509.331 / 647.385 10667.0 30.013200759887695 43 16 9 10 8 4.406390088076345 17.619356455283604 0.0 4 0.9647609395399591 6.554907159447832 10667.0 15.628555393848462 0.0 - - - - - - - 333.0 21 3 CDC6 cell division cycle 6 homolog (S. cerevisiae) 3641 458 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A141.[MT7]-ILQDLK[MT7].2y5_1.heavy 509.331 / 760.469 20667.0 30.013200759887695 43 16 9 10 8 4.406390088076345 17.619356455283604 0.0 4 0.9647609395399591 6.554907159447832 20667.0 19.08609594898725 0.0 - - - - - - - 333.0 41 2 CDC6 cell division cycle 6 homolog (S. cerevisiae) 3643 458 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A141.[MT7]-ILQDLK[MT7].2b4_1.heavy 509.331 / 614.363 27000.0 30.013200759887695 43 16 9 10 8 4.406390088076345 17.619356455283604 0.0 4 0.9647609395399591 6.554907159447832 27000.0 42.44085782843432 1.0 - - - - - - - 333.0 66 3 CDC6 cell division cycle 6 homolog (S. cerevisiae) 3645 458 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A141.[MT7]-ILQDLK[MT7].2y3_1.heavy 509.331 / 519.326 6667.0 30.013200759887695 43 16 9 10 8 4.406390088076345 17.619356455283604 0.0 4 0.9647609395399591 6.554907159447832 6667.0 5.801380399088974 0.0 - - - - - - - 333.0 13 2 CDC6 cell division cycle 6 homolog (S. cerevisiae) 3647 459 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A140.[MT7]-SILPGDK[MT7].2y4_1.heavy 509.313 / 560.316 255156.0 24.11669921875 50 20 10 10 10 13.603677330626397 7.350953537751647 0.0 3 0.9986983701763773 34.20357532458593 255156.0 216.6492247516456 0.0 - - - - - - - 293.0 510 4 PAK1 p21 protein (Cdc42/Rac)-activated kinase 1 3649 459 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A140.[MT7]-SILPGDK[MT7].2y5_1.heavy 509.313 / 673.4 42428.0 24.11669921875 50 20 10 10 10 13.603677330626397 7.350953537751647 0.0 3 0.9986983701763773 34.20357532458593 42428.0 90.84810933940773 0.0 - - - - - - - 694.875 84 8 PAK1 p21 protein (Cdc42/Rac)-activated kinase 1 3651 459 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A140.[MT7]-SILPGDK[MT7].2y6_1.heavy 509.313 / 786.484 10241.0 24.11669921875 50 20 10 10 10 13.603677330626397 7.350953537751647 0.0 3 0.9986983701763773 34.20357532458593 10241.0 34.976117382806805 0.0 - - - - - - - 293.0 20 9 PAK1 p21 protein (Cdc42/Rac)-activated kinase 1 3653 459 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A140.[MT7]-SILPGDK[MT7].2b5_1.heavy 509.313 / 612.384 878.0 24.11669921875 50 20 10 10 10 13.603677330626397 7.350953537751647 0.0 3 0.9986983701763773 34.20357532458593 878.0 2.4058290598290597 16.0 - - - - - - - 293.0 4 3 PAK1 p21 protein (Cdc42/Rac)-activated kinase 1 3655 460 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A142.[MT7]-VSIAVIK[MT7].2y4_1.heavy 509.349 / 574.404 94667.0 28.963899612426758 42 20 2 10 10 7.113184599855462 14.058400790277814 0.0 3 0.9949890280441328 17.426888948651605 94667.0 129.52377082726105 0.0 - - - - - - - 333.0 189 2 MAP2K1 mitogen-activated protein kinase kinase 1 3657 460 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A142.[MT7]-VSIAVIK[MT7].2b4_1.heavy 509.349 / 515.331 76667.0 28.963899612426758 42 20 2 10 10 7.113184599855462 14.058400790277814 0.0 3 0.9949890280441328 17.426888948651605 76667.0 85.54326334733054 0.0 - - - - - - - 333.0 153 2 MAP2K1 mitogen-activated protein kinase kinase 1 3659 460 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A142.[MT7]-VSIAVIK[MT7].2y3_1.heavy 509.349 / 503.367 67667.0 28.963899612426758 42 20 2 10 10 7.113184599855462 14.058400790277814 0.0 3 0.9949890280441328 17.426888948651605 67667.0 82.61371211617126 0.0 - - - - - - - 333.0 135 1 MAP2K1 mitogen-activated protein kinase kinase 1 3661 460 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A142.[MT7]-VSIAVIK[MT7].2y6_1.heavy 509.349 / 774.521 110000.0 28.963899612426758 42 20 2 10 10 7.113184599855462 14.058400790277814 0.0 3 0.9949890280441328 17.426888948651605 110000.0 63.79765162669431 0.0 - - - - - - - 333.0 525 1 MAP2K1 mitogen-activated protein kinase kinase 1 3663 461 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 ENO_ECO24.IQLVGDDLFVTNTK.2y8.peptide 781.92 / 937.5 167919.0 36.213199615478516 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 167919.0 85.10190215828042 0.0 - - - - - - - 454.0 335 1 3665 461 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 ENO_ECO24.IQLVGDDLFVTNTK.2y6.peptide 781.92 / 709.39 334704.0 36.213199615478516 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 334704.0 94.2040191778137 1.0 - - - - - - - 908.0 706 1 3667 461 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 ENO_ECO24.IQLVGDDLFVTNTK.2y5.peptide 781.92 / 562.32 439540.0 36.213199615478516 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 439540.0 198.3299534696207 0.0 - - - - - - - 1135.0 879 1 3669 462 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A148.[MT7]-DSFELK[MT7].2y4_1.heavy 513.789 / 680.41 6830.0 26.545000076293945 44 14 10 10 10 1.0500726535199016 62.40627435281951 0.0 3 0.9349624189763592 4.812799967884497 6830.0 27.66343789407314 0.0 - - - - - - - 325.0 13 4 CUL4A cullin 4A 3671 462 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A148.[MT7]-DSFELK[MT7].2y5_1.heavy 513.789 / 767.442 35453.0 26.545000076293945 44 14 10 10 10 1.0500726535199016 62.40627435281951 0.0 3 0.9349624189763592 4.812799967884497 35453.0 54.46487324041198 0.0 - - - - - - - 325.0 70 3 CUL4A cullin 4A 3673 462 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A148.[MT7]-DSFELK[MT7].2b4_1.heavy 513.789 / 623.279 29599.0 26.545000076293945 44 14 10 10 10 1.0500726535199016 62.40627435281951 0.0 3 0.9349624189763592 4.812799967884497 29599.0 30.33430474058839 0.0 - - - - - - - 772.875 59 8 CUL4A cullin 4A 3675 462 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A148.[MT7]-DSFELK[MT7].2y1_1.heavy 513.789 / 291.215 N/A 26.545000076293945 44 14 10 10 10 1.0500726535199016 62.40627435281951 0.0 3 0.9349624189763592 4.812799967884497 30249.0 9.490108133701169 0.0 - - - - - - - 976.0 60 1 CUL4A cullin 4A 3677 463 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A144.[MT7]-NEQFAIR.2b3_1.heavy 511.281 / 516.253 14628.0 24.576499938964844 41 11 10 10 10 1.011827123451011 59.327734544916986 0.0 3 0.8749372005492502 3.452745882845385 14628.0 22.018708262132602 0.0 - - - - - - - 299.0 29 3 CDC25B cell division cycle 25 homolog B (S. pombe) 3679 463 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A144.[MT7]-NEQFAIR.2y5_1.heavy 511.281 / 634.367 15523.0 24.576499938964844 41 11 10 10 10 1.011827123451011 59.327734544916986 0.0 3 0.8749372005492502 3.452745882845385 15523.0 39.860045484117016 0.0 - - - - - - - 709.125 31 8 CDC25B cell division cycle 25 homolog B (S. pombe) 3681 463 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A144.[MT7]-NEQFAIR.2b4_1.heavy 511.281 / 663.322 17911.0 24.576499938964844 41 11 10 10 10 1.011827123451011 59.327734544916986 0.0 3 0.8749372005492502 3.452745882845385 17911.0 33.33401591133936 0.0 - - - - - - - 746.5 35 8 CDC25B cell division cycle 25 homolog B (S. pombe) 3683 463 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A144.[MT7]-NEQFAIR.2y6_1.heavy 511.281 / 763.41 25374.0 24.576499938964844 41 11 10 10 10 1.011827123451011 59.327734544916986 0.0 3 0.8749372005492502 3.452745882845385 25374.0 50.988784323402726 0.0 - - - - - - - 639.7142857142857 50 7 CDC25B cell division cycle 25 homolog B (S. pombe) 3685 464 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A147.[MT7]-VLYSQK[MT7].2b3_1.heavy 513.315 / 520.325 6501.0 21.743024349212646 46 20 10 6 10 6.538014838929754 15.295162593477624 0.03750038146972656 3 0.9933945728880645 15.17653294560096 6501.0 12.751961538461538 0.0 - - - - - - - 260.0 13 4 CDC20 cell division cycle 20 homolog (S. cerevisiae) 3687 464 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A147.[MT7]-VLYSQK[MT7].2y4_1.heavy 513.315 / 669.369 30946.0 21.743024349212646 46 20 10 6 10 6.538014838929754 15.295162593477624 0.03750038146972656 3 0.9933945728880645 15.17653294560096 30946.0 31.923214313016175 0.0 - - - - - - - 668.5714285714286 61 7 CDC20 cell division cycle 20 homolog (S. cerevisiae) 3689 464 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A147.[MT7]-VLYSQK[MT7].2y5_1.heavy 513.315 / 782.453 34067.0 21.743024349212646 46 20 10 6 10 6.538014838929754 15.295162593477624 0.03750038146972656 3 0.9933945728880645 15.17653294560096 34067.0 161.4688448717949 0.0 - - - - - - - 260.0 68 4 CDC20 cell division cycle 20 homolog (S. cerevisiae) 3691 464 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A147.[MT7]-VLYSQK[MT7].2y3_1.heavy 513.315 / 506.306 28086.0 21.743024349212646 46 20 10 6 10 6.538014838929754 15.295162593477624 0.03750038146972656 3 0.9933945728880645 15.17653294560096 28086.0 27.68091346153846 0.0 - - - - - - - 594.2857142857143 56 7 CDC20 cell division cycle 20 homolog (S. cerevisiae) 3693 465 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A288.[MT7]-DLLTDEPFSR.2y4_1.heavy 668.847 / 506.272 28915.0 32.85689926147461 44 14 10 10 10 1.4556437742397506 46.868970201442224 0.0 3 0.934429716007245 4.792992127888214 28915.0 26.839065955815045 0.0 - - - - - - - 304.0 57 5 PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2 3695 465 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A288.[MT7]-DLLTDEPFSR.2y5_1.heavy 668.847 / 635.315 55395.0 32.85689926147461 44 14 10 10 10 1.4556437742397506 46.868970201442224 0.0 3 0.934429716007245 4.792992127888214 55395.0 90.51768138136106 0.0 - - - - - - - 652.4285714285714 110 7 PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2 3697 465 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A288.[MT7]-DLLTDEPFSR.2y9_1.heavy 668.847 / 1077.56 12784.0 32.85689926147461 44 14 10 10 10 1.4556437742397506 46.868970201442224 0.0 3 0.934429716007245 4.792992127888214 12784.0 40.51415435139573 0.0 - - - - - - - 304.0 25 6 PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2 3699 465 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A288.[MT7]-DLLTDEPFSR.2y7_1.heavy 668.847 / 851.389 34698.0 32.85689926147461 44 14 10 10 10 1.4556437742397506 46.868970201442224 0.0 3 0.934429716007245 4.792992127888214 34698.0 43.748660972404736 0.0 - - - - - - - 304.0 69 2 PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2 3701 466 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 RBSB_ECOLI.LAATIAQLPDQIGAK.3y7.peptide 503.96 / 728.39 106441.0 31.438199996948242 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 106441.0 95.18390969418533 0.0 - - - - - - - 327.0 212 3 3703 466 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 RBSB_ECOLI.LAATIAQLPDQIGAK.3y6.peptide 503.96 / 631.34 20243.0 31.438199996948242 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 20243.0 9.120293843490613 1.0 - - - - - - - 816.5 45 4 3705 466 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 RBSB_ECOLI.LAATIAQLPDQIGAK.3y5.peptide 503.96 / 516.31 21549.0 31.438199996948242 27 -3 10 10 10 null 0.0 0.0 3 0.0 0.0 21549.0 87.00897949822131 0.0 - - - - - - - 327.0 43 6 3707 467 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A292.[MT7]-NQIVTILQDR.2b3_1.heavy 672.392 / 500.295 25429.0 33.11119842529297 50 20 10 10 10 10.185579515757489 9.817801711262094 0.0 3 0.9944051752984456 16.491738372241084 25429.0 26.425151515254054 1.0 - - - - - - - 299.0 52 3 CDC6 cell division cycle 6 homolog (S. cerevisiae) 3709 467 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A292.[MT7]-NQIVTILQDR.2y8_1.heavy 672.392 / 957.573 12864.0 33.11119842529297 50 20 10 10 10 10.185579515757489 9.817801711262094 0.0 3 0.9944051752984456 16.491738372241084 12864.0 43.00903829394194 0.0 - - - - - - - 299.0 25 4 CDC6 cell division cycle 6 homolog (S. cerevisiae) 3711 467 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A292.[MT7]-NQIVTILQDR.2y9_1.heavy 672.392 / 1085.63 17950.0 33.11119842529297 50 20 10 10 10 10.185579515757489 9.817801711262094 0.0 3 0.9944051752984456 16.491738372241084 17950.0 40.213631207338295 0.0 - - - - - - - 299.0 35 6 CDC6 cell division cycle 6 homolog (S. cerevisiae) 3713 467 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A292.[MT7]-NQIVTILQDR.2y7_1.heavy 672.392 / 844.489 32310.0 33.11119842529297 50 20 10 10 10 10.185579515757489 9.817801711262094 0.0 3 0.9944051752984456 16.491738372241084 32310.0 36.17473684210526 0.0 - - - - - - - 299.0 64 4 CDC6 cell division cycle 6 homolog (S. cerevisiae) 3715 468 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A291.[MT7]-EEGSSGSGPSFR.2y5_1.heavy 670.814 / 563.294 2166.0 19.70159912109375 38 10 10 10 8 1.4121518069638619 53.75332237988536 0.0 4 0.8221088771105738 2.8815504992431404 2166.0 3.2100997506234408 3.0 - - - - - - - 289.0 8 5 CDC25C cell division cycle 25 homolog C (S. pombe) 3717 468 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A291.[MT7]-EEGSSGSGPSFR.2y10_1.heavy 670.814 / 938.433 5776.0 19.70159912109375 38 10 10 10 8 1.4121518069638619 53.75332237988536 0.0 4 0.8221088771105738 2.8815504992431404 5776.0 34.75032258175827 0.0 - - - - - - - 281.0 11 6 CDC25C cell division cycle 25 homolog C (S. pombe) 3719 468 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A291.[MT7]-EEGSSGSGPSFR.2y11_1.heavy 670.814 / 1067.48 13237.0 19.70159912109375 38 10 10 10 8 1.4121518069638619 53.75332237988536 0.0 4 0.8221088771105738 2.8815504992431404 13237.0 75.29906177482941 1.0 - - - - - - - 401.0 26 6 CDC25C cell division cycle 25 homolog C (S. pombe) 3721 468 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A291.[MT7]-EEGSSGSGPSFR.2y7_1.heavy 670.814 / 707.347 1203.0 19.70159912109375 38 10 10 10 8 1.4121518069638619 53.75332237988536 0.0 4 0.8221088771105738 2.8815504992431404 1203.0 2.251000513000513 7.0 - - - - - - - 321.0 3 6 CDC25C cell division cycle 25 homolog C (S. pombe) 3723 469 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A290.[MT7]-AEVTPSQHGNR.3y7_1.heavy 447.233 / 795.386 3607.0 14.26669979095459 46 16 10 10 10 3.560770239829417 28.08381144097369 0.0 3 0.9607774537937505 6.211044597220635 3607.0 51.63978417266188 0.0 - - - - - - - 222.0 7 5 KEAP1 kelch-like ECH-associated protein 1 3725 469 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A290.[MT7]-AEVTPSQHGNR.3y6_1.heavy 447.233 / 698.333 4856.0 14.26669979095459 46 16 10 10 10 3.560770239829417 28.08381144097369 0.0 3 0.9607774537937505 6.211044597220635 4856.0 49.32050385684233 0.0 - - - - - - - 173.5 9 8 KEAP1 kelch-like ECH-associated protein 1 3727 469 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A290.[MT7]-AEVTPSQHGNR.3b4_1.heavy 447.233 / 545.305 13458.0 14.26669979095459 46 16 10 10 10 3.560770239829417 28.08381144097369 0.0 3 0.9607774537937505 6.211044597220635 13458.0 35.398135368798194 0.0 - - - - - - - 291.2 26 10 KEAP1 kelch-like ECH-associated protein 1 3729 469 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A290.[MT7]-AEVTPSQHGNR.3y4_1.heavy 447.233 / 483.242 14846.0 14.26669979095459 46 16 10 10 10 3.560770239829417 28.08381144097369 0.0 3 0.9607774537937505 6.211044597220635 14846.0 49.75416216216216 0.0 - - - - - - - 239.54545454545453 29 11 KEAP1 kelch-like ECH-associated protein 1 3731 470 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A297.[MT7]-LYVPLYSSK[MT7].2b3_1.heavy 679.402 / 520.325 104498.0 33.21030044555664 38 8 10 10 10 0.4586117452834409 119.79663748672672 0.0 3 0.7774765844370026 2.5660837765877136 104498.0 104.66535272469804 0.0 - - - - - - - 295.0 208 3 UBR5;LOC730429 ubiquitin protein ligase E3 component n-recognin 5;e3 ubiquitin-protein ligase UBR5-like 3733 470 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A297.[MT7]-LYVPLYSSK[MT7].2y4_1.heavy 679.402 / 628.342 15940.0 33.21030044555664 38 8 10 10 10 0.4586117452834409 119.79663748672672 0.0 3 0.7774765844370026 2.5660837765877136 15940.0 28.83233503677449 0.0 - - - - - - - 295.0 31 5 UBR5;LOC730429 ubiquitin protein ligase E3 component n-recognin 5;e3 ubiquitin-protein ligase UBR5-like 3735 470 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A297.[MT7]-LYVPLYSSK[MT7].2y5_1.heavy 679.402 / 741.426 5018.0 33.21030044555664 38 8 10 10 10 0.4586117452834409 119.79663748672672 0.0 3 0.7774765844370026 2.5660837765877136 5018.0 13.318617132800245 0.0 - - - - - - - 701.0 10 8 UBR5;LOC730429 ubiquitin protein ligase E3 component n-recognin 5;e3 ubiquitin-protein ligase UBR5-like 3737 470 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A297.[MT7]-LYVPLYSSK[MT7].2y6_1.heavy 679.402 / 838.479 119553.0 33.21030044555664 38 8 10 10 10 0.4586117452834409 119.79663748672672 0.0 3 0.7774765844370026 2.5660837765877136 119553.0 502.3408456923894 0.0 - - - - - - - 295.0 239 1 UBR5;LOC730429 ubiquitin protein ligase E3 component n-recognin 5;e3 ubiquitin-protein ligase UBR5-like 3739 471 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A296.[MT7]-TYVTQTLLK[MT7].2y4_1.heavy 677.913 / 618.431 16667.0 29.612499237060547 44 14 10 10 10 1.4907500212641553 45.128757661963235 0.0 3 0.932009967188667 4.705955798747086 16667.0 32.2410887279541 0.0 - - - - - - - 333.0 33 3 ORC5 origin recognition complex, subunit 5 3741 471 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A296.[MT7]-TYVTQTLLK[MT7].2b3_1.heavy 677.913 / 508.289 31333.0 29.612499237060547 44 14 10 10 10 1.4907500212641553 45.128757661963235 0.0 3 0.932009967188667 4.705955798747086 31333.0 39.48183806299505 0.0 - - - - - - - 333.0 62 4 ORC5 origin recognition complex, subunit 5 3743 471 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A296.[MT7]-TYVTQTLLK[MT7].2y3_1.heavy 677.913 / 517.383 6333.0 29.612499237060547 44 14 10 10 10 1.4907500212641553 45.128757661963235 0.0 3 0.932009967188667 4.705955798747086 6333.0 3.6027247900419916 1.0 - - - - - - - 333.0 16 6 ORC5 origin recognition complex, subunit 5 3745 471 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A296.[MT7]-TYVTQTLLK[MT7].2y6_1.heavy 677.913 / 847.537 38333.0 29.612499237060547 44 14 10 10 10 1.4907500212641553 45.128757661963235 0.0 3 0.932009967188667 4.705955798747086 38333.0 77.02921523238379 0.0 - - - - - - - 333.0 76 2 ORC5 origin recognition complex, subunit 5 3747 472 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A295.[MT7]-LTVGVYESAK[MT7].2y5_1.heavy 677.895 / 741.39 62333.0 27.589149475097656 43 18 10 5 10 6.135035831941399 16.299823300030432 0.045299530029296875 3 0.9869490370597507 10.791147461295763 62333.0 104.3570388372093 0.0 - - - - - - - 333.0 124 5 GADD45B growth arrest and DNA-damage-inducible, beta 3749 472 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A295.[MT7]-LTVGVYESAK[MT7].2y9_1.heavy 677.895 / 1097.6 52000.0 27.589149475097656 43 18 10 5 10 6.135035831941399 16.299823300030432 0.045299530029296875 3 0.9869490370597507 10.791147461295763 52000.0 82.7465674865027 0.0 - - - - - - - 333.0 104 3 GADD45B growth arrest and DNA-damage-inducible, beta 3751 472 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A295.[MT7]-LTVGVYESAK[MT7].2b4_1.heavy 677.895 / 515.331 47000.0 27.589149475097656 43 18 10 5 10 6.135035831941399 16.299823300030432 0.045299530029296875 3 0.9869490370597507 10.791147461295763 47000.0 29.309907843518495 0.0 - - - - - - - 333.0 94 4 GADD45B growth arrest and DNA-damage-inducible, beta 3753 472 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A295.[MT7]-LTVGVYESAK[MT7].2y7_1.heavy 677.895 / 897.48 53333.0 27.589149475097656 43 18 10 5 10 6.135035831941399 16.299823300030432 0.045299530029296875 3 0.9869490370597507 10.791147461295763 53333.0 37.99501312335958 0.0 - - - - - - - 333.0 106 3 GADD45B growth arrest and DNA-damage-inducible, beta 3755 473 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A151.[MT7]-NLLFLK[MT7].2y4_1.heavy 518.344 / 664.451 86898.0 35.675498962402344 50 20 10 10 10 5.9354064761555 16.848045774410433 0.0 3 0.9936016365636963 15.420415670409012 86898.0 207.1069 0.0 - - - - - - - 320.0 173 6 UBE3C ubiquitin protein ligase E3C 3757 473 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A151.[MT7]-NLLFLK[MT7].2y5_1.heavy 518.344 / 777.536 60732.0 35.675498962402344 50 20 10 10 10 5.9354064761555 16.848045774410433 0.0 3 0.9936016365636963 15.420415670409012 60732.0 266.787 0.0 - - - - - - - 360.0 121 8 UBE3C ubiquitin protein ligase E3C 3759 473 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A151.[MT7]-NLLFLK[MT7].2b4_1.heavy 518.344 / 632.389 35527.0 35.675498962402344 50 20 10 10 10 5.9354064761555 16.848045774410433 0.0 3 0.9936016365636963 15.420415670409012 35527.0 96.51501666666667 0.0 - - - - - - - 400.0 71 6 UBE3C ubiquitin protein ligase E3C 3761 473 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A151.[MT7]-NLLFLK[MT7].2y3_1.heavy 518.344 / 551.367 155072.0 35.675498962402344 50 20 10 10 10 5.9354064761555 16.848045774410433 0.0 3 0.9936016365636963 15.420415670409012 155072.0 367.2015429827606 0.0 - - - - - - - 320.0 310 6 UBE3C ubiquitin protein ligase E3C 3763 474 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A157.[MT7]-GAVLYLLR.2y5_1.heavy 524.835 / 677.435 19143.0 37.12139892578125 50 20 10 10 10 10.081906134804314 9.918759276560252 0.0 3 0.9908247155613067 12.874191857246998 19143.0 63.20764400350986 0.0 - - - - - - - 360.5 38 8 HERC3 hect domain and RLD 3 3765 474 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A157.[MT7]-GAVLYLLR.2y6_1.heavy 524.835 / 776.503 8028.0 37.12139892578125 50 20 10 10 10 10.081906134804314 9.918759276560252 0.0 3 0.9908247155613067 12.874191857246998 8028.0 40.14315553633897 0.0 - - - - - - - 231.75 16 8 HERC3 hect domain and RLD 3 3767 474 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A157.[MT7]-GAVLYLLR.2b5_1.heavy 524.835 / 648.384 19349.0 37.12139892578125 50 20 10 10 10 10.081906134804314 9.918759276560252 0.0 3 0.9908247155613067 12.874191857246998 19349.0 107.84556841876834 0.0 - - - - - - - 297.55555555555554 38 9 HERC3 hect domain and RLD 3 3769 474 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A157.[MT7]-GAVLYLLR.2y7_1.heavy 524.835 / 847.54 12968.0 37.12139892578125 50 20 10 10 10 10.081906134804314 9.918759276560252 0.0 3 0.9908247155613067 12.874191857246998 12968.0 81.2073786407767 0.0 - - - - - - - 343.3333333333333 25 3 HERC3 hect domain and RLD 3 3771 475 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A155.[MT7]-IQQIEK[MT7].2y4_1.heavy 523.826 / 661.4 19438.0 21.752399444580078 47 17 10 10 10 3.121228209654063 25.637740961762596 0.0 3 0.9729990636277281 7.493606552299401 19438.0 27.747145061728396 0.0 - - - - - - - 629.4285714285714 38 7 APC;UBE4A adenomatous polyposis coli;ubiquitination factor E4A (UFD2 homolog, yeast) 3773 475 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A155.[MT7]-IQQIEK[MT7].2y5_1.heavy 523.826 / 789.459 30842.0 21.752399444580078 47 17 10 10 10 3.121228209654063 25.637740961762596 0.0 3 0.9729990636277281 7.493606552299401 30842.0 28.053638368246965 0.0 - - - - - - - 259.0 61 1 APC;UBE4A adenomatous polyposis coli;ubiquitination factor E4A (UFD2 homolog, yeast) 3775 475 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A155.[MT7]-IQQIEK[MT7].2b4_1.heavy 523.826 / 627.395 10626.0 21.752399444580078 47 17 10 10 10 3.121228209654063 25.637740961762596 0.0 3 0.9729990636277281 7.493606552299401 10626.0 13.088377963439017 0.0 - - - - - - - 596.0 37 10 APC;UBE4A adenomatous polyposis coli;ubiquitination factor E4A (UFD2 homolog, yeast) 3777 475 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A155.[MT7]-IQQIEK[MT7].2y3_1.heavy 523.826 / 533.341 36285.0 21.752399444580078 47 17 10 10 10 3.121228209654063 25.637740961762596 0.0 3 0.9729990636277281 7.493606552299401 36285.0 147.7878693714385 0.0 - - - - - - - 662.4444444444445 72 9 APC;UBE4A adenomatous polyposis coli;ubiquitination factor E4A (UFD2 homolog, yeast) 3779 476 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A120.[MT7]-ALENLK[MT7].2y4_1.heavy 488.307 / 647.385 23658.0 24.162599563598633 44 14 10 10 10 5.876214425164596 17.017758843474972 0.0 3 0.9328902043867672 4.737074114518027 23658.0 35.06505924908731 0.0 - - - - - - - 292.0 47 1 SMC1B;KIAA1586 structural maintenance of chromosomes 1B;KIAA1586 3781 476 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A120.[MT7]-ALENLK[MT7].2y5_1.heavy 488.307 / 760.469 37677.0 24.162599563598633 44 14 10 10 10 5.876214425164596 17.017758843474972 0.0 3 0.9328902043867672 4.737074114518027 37677.0 71.50458047945204 0.0 - - - - - - - 693.5 75 8 SMC1B;KIAA1586 structural maintenance of chromosomes 1B;KIAA1586 3783 476 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A120.[MT7]-ALENLK[MT7].2b4_1.heavy 488.307 / 572.316 12851.0 24.162599563598633 44 14 10 10 10 5.876214425164596 17.017758843474972 0.0 3 0.9328902043867672 4.737074114518027 12851.0 13.929251712328767 1.0 - - - - - - - 292.0 25 4 SMC1B;KIAA1586 structural maintenance of chromosomes 1B;KIAA1586 3785 476 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A120.[MT7]-ALENLK[MT7].2y3_1.heavy 488.307 / 518.342 27163.0 24.162599563598633 44 14 10 10 10 5.876214425164596 17.017758843474972 0.0 3 0.9328902043867672 4.737074114518027 27163.0 29.920967461566804 0.0 - - - - - - - 700.8 54 10 SMC1B;KIAA1586 structural maintenance of chromosomes 1B;KIAA1586 3787 477 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A121.[MT7]-VELAEK[MT7].2y4_1.heavy 488.799 / 604.379 27571.0 22.50749969482422 45 20 10 5 10 8.807332892516873 11.354175119798722 0.040599822998046875 3 0.9961842077379944 19.972471653046732 27571.0 11.054591098030906 0.0 - - - - - - - 669.0 55 4 ZNF365;MYH10;STAT5A;STAT5B zinc finger protein 365;myosin, heavy chain 10, non-muscle;signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 3789 477 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A121.[MT7]-VELAEK[MT7].2y5_1.heavy 488.799 / 733.421 44434.0 22.50749969482422 45 20 10 5 10 8.807332892516873 11.354175119798722 0.040599822998046875 3 0.9961842077379944 19.972471653046732 44434.0 66.55612735592649 0.0 - - - - - - - 268.0 88 5 ZNF365;MYH10;STAT5A;STAT5B zinc finger protein 365;myosin, heavy chain 10, non-muscle;signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 3791 477 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A121.[MT7]-VELAEK[MT7].2b4_1.heavy 488.799 / 557.341 12045.0 22.50749969482422 45 20 10 5 10 8.807332892516873 11.354175119798722 0.040599822998046875 3 0.9961842077379944 19.972471653046732 12045.0 22.346778711484593 0.0 - - - - - - - 268.0 24 5 ZNF365;MYH10;STAT5A;STAT5B zinc finger protein 365;myosin, heavy chain 10, non-muscle;signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 3793 477 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A121.[MT7]-VELAEK[MT7].2y3_1.heavy 488.799 / 491.295 38278.0 22.50749969482422 45 20 10 5 10 8.807332892516873 11.354175119798722 0.040599822998046875 3 0.9961842077379944 19.972471653046732 38278.0 47.499609424508705 0.0 - - - - - - - 722.6 76 10 ZNF365;MYH10;STAT5A;STAT5B zinc finger protein 365;myosin, heavy chain 10, non-muscle;signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 3795 478 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A228.[MT7]-AGVALPFEK[MT7].2y4_1.heavy 610.368 / 664.379 80049.0 31.513500213623047 41 18 10 3 10 11.707763253940708 8.54134114527308 0.050201416015625 3 0.9898197676177578 12.221215422742686 80049.0 144.38333200847035 0.0 - - - - - - - 329.0 160 4 WWP2 WW domain containing E3 ubiquitin protein ligase 2 3797 478 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A228.[MT7]-AGVALPFEK[MT7].2y5_1.heavy 610.368 / 777.463 17459.0 31.513500213623047 41 18 10 3 10 11.707763253940708 8.54134114527308 0.050201416015625 3 0.9898197676177578 12.221215422742686 17459.0 65.78680451127819 0.0 - - - - - - - 329.0 34 7 WWP2 WW domain containing E3 ubiquitin protein ligase 2 3799 478 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A228.[MT7]-AGVALPFEK[MT7].2y6_1.heavy 610.368 / 848.5 16800.0 31.513500213623047 41 18 10 3 10 11.707763253940708 8.54134114527308 0.050201416015625 3 0.9898197676177578 12.221215422742686 16800.0 11.781790591805766 1.0 - - - - - - - 329.0 33 3 WWP2 WW domain containing E3 ubiquitin protein ligase 2 3801 478 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A228.[MT7]-AGVALPFEK[MT7].2y7_1.heavy 610.368 / 947.568 2635.0 31.513500213623047 41 18 10 3 10 11.707763253940708 8.54134114527308 0.050201416015625 3 0.9898197676177578 12.221215422742686 2635.0 7.2772382397572075 2.0 - - - - - - - 329.0 5 6 WWP2 WW domain containing E3 ubiquitin protein ligase 2 3803 479 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A221.[MT7]-YEDGIALLR.2y8_1.heavy 597.336 / 886.499 5771.0 33.63680076599121 45 20 10 5 10 13.999432250087347 7.143146822927484 0.049198150634765625 3 0.9939721942690146 15.887821474564532 5771.0 24.57000143925446 0.0 - - - - - - - 289.0 11 7 ANAPC7 anaphase promoting complex subunit 7 3805 479 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A221.[MT7]-YEDGIALLR.2b6_1.heavy 597.336 / 793.385 3174.0 33.63680076599121 45 20 10 5 10 13.999432250087347 7.143146822927484 0.049198150634765625 3 0.9939721942690146 15.887821474564532 3174.0 1.681237474743881 1.0 - - - - - - - 289.0 15 1 ANAPC7 anaphase promoting complex subunit 7 3807 479 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A221.[MT7]-YEDGIALLR.2y6_1.heavy 597.336 / 642.43 9521.0 33.63680076599121 45 20 10 5 10 13.999432250087347 7.143146822927484 0.049198150634765625 3 0.9939721942690146 15.887821474564532 9521.0 8.710239127275521 0.0 - - - - - - - 289.0 19 3 ANAPC7 anaphase promoting complex subunit 7 3809 479 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A221.[MT7]-YEDGIALLR.2y7_1.heavy 597.336 / 757.457 4905.0 33.63680076599121 45 20 10 5 10 13.999432250087347 7.143146822927484 0.049198150634765625 3 0.9939721942690146 15.887821474564532 4905.0 9.404549893732412 0.0 - - - - - - - 289.0 9 6 ANAPC7 anaphase promoting complex subunit 7 3811 480 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A223.[MT7]-NLLSVAYK[MT7].2y4_1.heavy 598.368 / 624.384 42000.0 31.080699920654297 50 20 10 10 10 20.116150470733558 4.971130045258276 0.0 3 0.9948134781183873 17.129172275898892 42000.0 77.28 0.0 - - - - - - - 333.0 84 4 YWHAQ;SFN;YWHAB;YWHAE;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;stratifin;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 3813 480 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A223.[MT7]-NLLSVAYK[MT7].2y5_1.heavy 598.368 / 711.416 129667.0 31.080699920654297 50 20 10 10 10 20.116150470733558 4.971130045258276 0.0 3 0.9948134781183873 17.129172275898892 129667.0 64.83031755385875 0.0 - - - - - - - 333.0 259 2 YWHAQ;SFN;YWHAB;YWHAE;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;stratifin;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 3815 480 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A223.[MT7]-NLLSVAYK[MT7].2y3_1.heavy 598.368 / 525.315 106667.0 31.080699920654297 50 20 10 10 10 20.116150470733558 4.971130045258276 0.0 3 0.9948134781183873 17.129172275898892 106667.0 105.6233067546784 0.0 - - - - - - - 333.0 213 2 YWHAQ;SFN;YWHAB;YWHAE;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;stratifin;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 3817 480 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A223.[MT7]-NLLSVAYK[MT7].2y6_1.heavy 598.368 / 824.5 60333.0 31.080699920654297 50 20 10 10 10 20.116150470733558 4.971130045258276 0.0 3 0.9948134781183873 17.129172275898892 60333.0 33.91289794700124 0.0 - - - - - - - 333.0 120 3 YWHAQ;SFN;YWHAB;YWHAE;YWHAG;YWHAH;YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide;stratifin;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide;tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 3819 481 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A123.[MT7]-AAVNVVDFDDK[MT7].3y3_1.heavy 494.268 / 521.269 5333.0 29.065900802612305 50 20 10 10 10 7.305095169548795 13.689075594367182 0.0 3 0.9935537022697318 15.362914523373563 5333.0 18.334488982606015 0.0 - - - - - - - 333.0 10 4 FBXW11;BTRC F-box and WD repeat domain containing 11;beta-transducin repeat containing 3821 481 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A123.[MT7]-AAVNVVDFDDK[MT7].3b4_1.heavy 494.268 / 500.295 27000.0 29.065900802612305 50 20 10 10 10 7.305095169548795 13.689075594367182 0.0 3 0.9935537022697318 15.362914523373563 27000.0 62.621379310344835 0.0 - - - - - - - 333.0 54 3 FBXW11;BTRC F-box and WD repeat domain containing 11;beta-transducin repeat containing 3823 481 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A123.[MT7]-AAVNVVDFDDK[MT7].3b5_1.heavy 494.268 / 599.363 10667.0 29.065900802612305 50 20 10 10 10 7.305095169548795 13.689075594367182 0.0 3 0.9935537022697318 15.362914523373563 10667.0 18.15290091737034 0.0 - - - - - - - 333.0 21 4 FBXW11;BTRC F-box and WD repeat domain containing 11;beta-transducin repeat containing 3825 481 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A123.[MT7]-AAVNVVDFDDK[MT7].3y5_1.heavy 494.268 / 783.364 8000.0 29.065900802612305 50 20 10 10 10 7.305095169548795 13.689075594367182 0.0 3 0.9935537022697318 15.362914523373563 8000.0 31.52 0.0 - - - - - - - 333.0 16 2 FBXW11;BTRC F-box and WD repeat domain containing 11;beta-transducin repeat containing 3827 482 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A122.[MT7]-SQLTLK[MT7].2y4_1.heavy 489.315 / 618.431 31670.0 23.238300323486328 35 15 2 10 8 2.986161684154173 33.48780494058375 0.0 4 0.9586478555110247 6.047909591546397 31670.0 38.00324075598922 1.0 - - - - - - - 674.7142857142857 308 7 WWP2 WW domain containing E3 ubiquitin protein ligase 2 3829 482 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A122.[MT7]-SQLTLK[MT7].2y5_1.heavy 489.315 / 746.489 23058.0 23.238300323486328 35 15 2 10 8 2.986161684154173 33.48780494058375 0.0 4 0.9586478555110247 6.047909591546397 23058.0 20.131500288353898 0.0 - - - - - - - 278.0 46 4 WWP2 WW domain containing E3 ubiquitin protein ligase 2 3831 482 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A122.[MT7]-SQLTLK[MT7].2y3_1.heavy 489.315 / 505.347 48895.0 23.238300323486328 35 15 2 10 8 2.986161684154173 33.48780494058375 0.0 4 0.9586478555110247 6.047909591546397 48895.0 185.44127979878309 0.0 - - - - - - - 278.0 97 3 WWP2 WW domain containing E3 ubiquitin protein ligase 2 3833 482 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A122.[MT7]-SQLTLK[MT7].2y1_1.heavy 489.315 / 291.215 N/A 23.238300323486328 35 15 2 10 8 2.986161684154173 33.48780494058375 0.0 4 0.9586478555110247 6.047909591546397 47506.0 8.930001822461733 2.0 - - - - - - - 2778.0 120 1 WWP2 WW domain containing E3 ubiquitin protein ligase 2 3835 483 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 BLAT_ECOLX.VAGPLLRSALPAGWFIADK.3y7.peptide 661.38 / 836.43 329553.0 39.59673309326172 23 -3 10 6 10 null 0.0 0.039699554443359375 3 0.0 0.0 329553.0 372.87084247692695 0.0 - - - - - - - 1293.6666666666667 659 3 3837 483 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 BLAT_ECOLX.VAGPLLRSALPAGWFIADK.3y9.peptide 661.38 / 502.76 617623.0 39.59673309326172 23 -3 10 6 10 null 0.0 0.039699554443359375 3 0.0 0.0 617623.0 320.22564369628356 0.0 - - - - - - - 2426.0 1235 1 3839 483 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 BLAT_ECOLX.VAGPLLRSALPAGWFIADK.3y17.peptide 661.38 / 906.51 595128.0 39.59673309326172 23 -3 10 6 10 null 0.0 0.039699554443359375 3 0.0 0.0 595128.0 281.8815154747022 0.0 - - - - - - - 1132.0 1190 1 3841 484 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A132.[MT7]-ETGGVEK[MT7].2y4_1.heavy 504.284 / 576.347 4732.0 15.621600151062012 50 20 10 10 10 11.102651944396188 9.006857145555458 0.0 3 0.99561450901664 18.629208979155333 4732.0 5.46 0.0 - - - - - - - 260.0 9 7 RAD21 RAD21 homolog (S. pombe) 3843 484 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A132.[MT7]-ETGGVEK[MT7].2y5_1.heavy 504.284 / 633.369 12559.0 15.621600151062012 50 20 10 10 10 11.102651944396188 9.006857145555458 0.0 3 0.99561450901664 18.629208979155333 12559.0 46.00366300366301 0.0 - - - - - - - 248.1818181818182 25 11 RAD21 RAD21 homolog (S. pombe) 3845 484 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A132.[MT7]-ETGGVEK[MT7].2y6_1.heavy 504.284 / 734.417 27302.0 15.621600151062012 50 20 10 10 10 11.102651944396188 9.006857145555458 0.0 3 0.99561450901664 18.629208979155333 27302.0 79.50582417582417 0.0 - - - - - - - 614.25 54 8 RAD21 RAD21 homolog (S. pombe) 3847 484 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A132.[MT7]-ETGGVEK[MT7].2b5_1.heavy 504.284 / 588.311 5824.0 15.621600151062012 50 20 10 10 10 11.102651944396188 9.006857145555458 0.0 3 0.99561450901664 18.629208979155333 5824.0 35.2 1.0 - - - - - - - 264.72727272727275 11 11 RAD21 RAD21 homolog (S. pombe) 3849 485 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A231.[MT7]-DLK[MT7]PQNLLIDDK[MT7].3y3_1.heavy 615.367 / 521.269 39000.0 29.365999221801758 44 14 10 10 10 1.676291427749713 39.770332033589966 0.0 3 0.9479420985172327 5.385385035897161 39000.0 57.71578884223155 0.0 - - - - - - - 333.0 78 2 CDK1 cyclin-dependent kinase 1 3851 485 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A231.[MT7]-DLK[MT7]PQNLLIDDK[MT7].3y4_1.heavy 615.367 / 634.353 49667.0 29.365999221801758 44 14 10 10 10 1.676291427749713 39.770332033589966 0.0 3 0.9479420985172327 5.385385035897161 49667.0 94.317633 0.0 - - - - - - - 333.0 99 5 CDK1 cyclin-dependent kinase 1 3853 485 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A231.[MT7]-DLK[MT7]PQNLLIDDK[MT7].3y5_1.heavy 615.367 / 747.437 31667.0 29.365999221801758 44 14 10 10 10 1.676291427749713 39.770332033589966 0.0 3 0.9479420985172327 5.385385035897161 31667.0 44.665903081440206 0.0 - - - - - - - 333.0 63 4 CDK1 cyclin-dependent kinase 1 3855 485 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A231.[MT7]-DLK[MT7]PQNLLIDDK[MT7].3b7_2.heavy 615.367 / 549.331 69667.0 29.365999221801758 44 14 10 10 10 1.676291427749713 39.770332033589966 0.0 3 0.9479420985172327 5.385385035897161 69667.0 58.08169397450319 0.0 - - - - - - - 667.0 139 3 CDK1 cyclin-dependent kinase 1 3857 486 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A238.[MT7]-GAQGAAPGGGEAR.2y8_1.heavy 621.819 / 714.353 8834.0 14.164650201797485 46 20 10 6 10 38.76774772214027 2.57946375210469 0.03699970245361328 3 0.9984498848716983 31.34182460509264 8834.0 62.46262626262626 0.0 - - - - - - - 211.2 17 10 AIRE autoimmune regulator 3859 486 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A238.[MT7]-GAQGAAPGGGEAR.2y10_1.heavy 621.819 / 842.411 18855.0 14.164650201797485 46 20 10 6 10 38.76774772214027 2.57946375210469 0.03699970245361328 3 0.9984498848716983 31.34182460509264 18855.0 185.6931818181818 0.0 - - - - - - - 234.66666666666666 37 9 AIRE autoimmune regulator 3861 486 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A238.[MT7]-GAQGAAPGGGEAR.2b5_1.heavy 621.819 / 529.285 15031.0 14.164650201797485 46 20 10 6 10 38.76774772214027 2.57946375210469 0.03699970245361328 3 0.9984498848716983 31.34182460509264 15031.0 28.511004253257113 0.0 - - - - - - - 242.0 30 6 AIRE autoimmune regulator 3863 486 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A238.[MT7]-GAQGAAPGGGEAR.2y7_1.heavy 621.819 / 643.316 22811.0 14.164650201797485 46 20 10 6 10 38.76774772214027 2.57946375210469 0.03699970245361328 3 0.9984498848716983 31.34182460509264 22811.0 102.00808157447005 0.0 - - - - - - - 264.0 45 10 AIRE autoimmune regulator 3865 487 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A235.[MT7]-K[MT7]VETEAK[MT7].3y6_1.heavy 412.922 / 820.453 4000.0 14.846599578857422 48 18 10 10 10 7.113095581430839 14.058576727276936 0.0 3 0.9841867192510592 9.801158464161103 4000.0 46.5 1.0 - - - - - - - 192.0 24 5 SMC1A structural maintenance of chromosomes 1A 3867 487 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A235.[MT7]-K[MT7]VETEAK[MT7].3y3_1.heavy 412.922 / 491.295 19999.0 14.846599578857422 48 18 10 10 10 7.113095581430839 14.058576727276936 0.0 3 0.9841867192510592 9.801158464161103 19999.0 48.95588541666666 0.0 - - - - - - - 337.77777777777777 39 9 SMC1A structural maintenance of chromosomes 1A 3869 487 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A235.[MT7]-K[MT7]VETEAK[MT7].3y4_1.heavy 412.922 / 592.342 41118.0 14.846599578857422 48 18 10 10 10 7.113095581430839 14.058576727276936 0.0 3 0.9841867192510592 9.801158464161103 41118.0 35.97825 0.0 - - - - - - - 240.0 82 8 SMC1A structural maintenance of chromosomes 1A 3871 487 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A235.[MT7]-K[MT7]VETEAK[MT7].3y5_1.heavy 412.922 / 721.385 8480.0 14.846599578857422 48 18 10 10 10 7.113095581430839 14.058576727276936 0.0 3 0.9841867192510592 9.801158464161103 8480.0 40.28 0.0 - - - - - - - 248.88888888888889 16 9 SMC1A structural maintenance of chromosomes 1A 3873 488 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A232.[MT7]-IEELLAEK[MT7].2y4_1.heavy 616.871 / 604.379 44438.0 32.85689926147461 44 14 10 10 10 1.8623637890069247 43.06775131870878 0.0 3 0.9405556820754899 5.036536625519144 44438.0 82.02134340563902 0.0 - - - - - - - 304.0 88 1 UBA3 ubiquitin-like modifier activating enzyme 3 3875 488 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A232.[MT7]-IEELLAEK[MT7].2b3_1.heavy 616.871 / 516.279 49308.0 32.85689926147461 44 14 10 10 10 1.8623637890069247 43.06775131870878 0.0 3 0.9405556820754899 5.036536625519144 49308.0 55.296058480727346 0.0 - - - - - - - 304.0 98 2 UBA3 ubiquitin-like modifier activating enzyme 3 3877 488 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A232.[MT7]-IEELLAEK[MT7].2b4_1.heavy 616.871 / 629.363 55091.0 32.85689926147461 44 14 10 10 10 1.8623637890069247 43.06775131870878 0.0 3 0.9405556820754899 5.036536625519144 55091.0 217.43022496540243 0.0 - - - - - - - 304.0 110 4 UBA3 ubiquitin-like modifier activating enzyme 3 3879 488 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A232.[MT7]-IEELLAEK[MT7].2y7_1.heavy 616.871 / 975.548 49004.0 32.85689926147461 44 14 10 10 10 1.8623637890069247 43.06775131870878 0.0 3 0.9405556820754899 5.036536625519144 49004.0 118.31659298417466 0.0 - - - - - - - 304.0 98 4 UBA3 ubiquitin-like modifier activating enzyme 3 3881 489 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A135.[MT7]-SDC[CAM]TLK[MT7].2y4_1.heavy 506.273 / 665.377 8946.0 17.138099670410156 37 12 10 5 10 1.1666681493406943 58.07808475789327 0.0485992431640625 3 0.8874206721023534 3.6431064347507323 8946.0 21.995764978964168 0.0 - - - - - - - 284.6 17 5 MAPK8;MAPK9;MAPK10 mitogen-activated protein kinase 8;mitogen-activated protein kinase 9;mitogen-activated protein kinase 10 3883 489 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A135.[MT7]-SDC[CAM]TLK[MT7].2y5_1.heavy 506.273 / 780.404 6100.0 17.138099670410156 37 12 10 5 10 1.1666681493406943 58.07808475789327 0.0485992431640625 3 0.8874206721023534 3.6431064347507323 6100.0 34.099443161919304 1.0 - - - - - - - 305.0 12 8 MAPK8;MAPK9;MAPK10 mitogen-activated protein kinase 8;mitogen-activated protein kinase 9;mitogen-activated protein kinase 10 3885 489 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A135.[MT7]-SDC[CAM]TLK[MT7].2b4_1.heavy 506.273 / 608.247 2846.0 17.138099670410156 37 12 10 5 10 1.1666681493406943 58.07808475789327 0.0485992431640625 3 0.8874206721023534 3.6431064347507323 2846.0 1.8483121514920327 1.0 - - - - - - - 319.57142857142856 5 7 MAPK8;MAPK9;MAPK10 mitogen-activated protein kinase 8;mitogen-activated protein kinase 9;mitogen-activated protein kinase 10 3887 489 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A135.[MT7]-SDC[CAM]TLK[MT7].2y3_1.heavy 506.273 / 505.347 4880.0 17.138099670410156 37 12 10 5 10 1.1666681493406943 58.07808475789327 0.0485992431640625 3 0.8874206721023534 3.6431064347507323 4880.0 12.602214022140222 1.0 - - - - - - - 668.0 9 7 MAPK8;MAPK9;MAPK10 mitogen-activated protein kinase 8;mitogen-activated protein kinase 9;mitogen-activated protein kinase 10 3889 490 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A133.[MT7]-GTIDVSK[MT7].2y4_1.heavy 504.302 / 592.342 68058.0 20.138399124145508 48 18 10 10 10 3.7925015568139453 26.36782042194053 0.0 3 0.9826121027663411 9.345607398234616 68058.0 106.57956311958898 0.0 - - - - - - - 408.3333333333333 136 6 POLD2 polymerase (DNA directed), delta 2, regulatory subunit 50kDa 3891 490 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A133.[MT7]-GTIDVSK[MT7].2y5_1.heavy 504.302 / 705.426 24726.0 20.138399124145508 48 18 10 10 10 3.7925015568139453 26.36782042194053 0.0 3 0.9826121027663411 9.345607398234616 24726.0 55.23784532401132 0.0 - - - - - - - 306.25 49 8 POLD2 polymerase (DNA directed), delta 2, regulatory subunit 50kDa 3893 490 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A133.[MT7]-GTIDVSK[MT7].2b4_1.heavy 504.302 / 531.289 106983.0 20.138399124145508 48 18 10 10 10 3.7925015568139453 26.36782042194053 0.0 3 0.9826121027663411 9.345607398234616 106983.0 157.95938839312853 0.0 - - - - - - - 455.0 213 7 POLD2 polymerase (DNA directed), delta 2, regulatory subunit 50kDa 3895 490 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A133.[MT7]-GTIDVSK[MT7].2y6_1.heavy 504.302 / 806.474 23747.0 20.138399124145508 48 18 10 10 10 3.7925015568139453 26.36782042194053 0.0 3 0.9826121027663411 9.345607398234616 23747.0 170.59069387755102 0.0 - - - - - - - 315.0 47 7 POLD2 polymerase (DNA directed), delta 2, regulatory subunit 50kDa 3897 491 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A139.[MT7]-LDQQTLR.2b3_1.heavy 509.294 / 501.279 11215.0 21.818350791931152 42 20 10 6 6 6.594037972917755 15.165214457470224 0.037799835205078125 5 0.9908882308988827 12.919053557095218 11215.0 5.746480317953498 2.0 - - - - - - - 1639.5714285714287 54 7 ORC2 origin recognition complex, subunit 2 3899 491 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A139.[MT7]-LDQQTLR.2y5_1.heavy 509.294 / 645.368 50597.0 21.818350791931152 42 20 10 6 6 6.594037972917755 15.165214457470224 0.037799835205078125 5 0.9908882308988827 12.919053557095218 50597.0 48.33929995497137 0.0 - - - - - - - 652.0 101 10 ORC2 origin recognition complex, subunit 2 3901 491 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A139.[MT7]-LDQQTLR.2b4_1.heavy 509.294 / 629.338 10954.0 21.818350791931152 42 20 10 6 6 6.594037972917755 15.165214457470224 0.037799835205078125 5 0.9908882308988827 12.919053557095218 10954.0 56.65862068965518 0.0 - - - - - - - 261.0 21 5 ORC2 origin recognition complex, subunit 2 3903 491 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A139.[MT7]-LDQQTLR.2y6_1.heavy 509.294 / 760.395 39382.0 21.818350791931152 42 20 10 6 6 6.594037972917755 15.165214457470224 0.037799835205078125 5 0.9908882308988827 12.919053557095218 39382.0 29.14517482506058 0.0 - - - - - - - 652.0 78 8 ORC2 origin recognition complex, subunit 2 3905 492 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A137.[MT7]-NMDAIIVDSEK[MT7].3b4_1.heavy 508.272 / 576.257 18333.0 30.162599563598633 43 13 10 10 10 3.8959192964358818 25.66788282587973 0.0 3 0.927324498626629 4.5499054700763795 18333.0 71.92041405405405 0.0 - - - - - - - 333.0 36 3 SMC1A structural maintenance of chromosomes 1A 3907 492 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A137.[MT7]-NMDAIIVDSEK[MT7].3b5_1.heavy 508.272 / 689.341 14000.0 30.162599563598633 43 13 10 10 10 3.8959192964358818 25.66788282587973 0.0 3 0.927324498626629 4.5499054700763795 14000.0 32.61013493253373 0.0 - - - - - - - 333.0 28 3 SMC1A structural maintenance of chromosomes 1A 3909 492 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A137.[MT7]-NMDAIIVDSEK[MT7].3y4_1.heavy 508.272 / 622.316 12667.0 30.162599563598633 43 13 10 10 10 3.8959192964358818 25.66788282587973 0.0 3 0.927324498626629 4.5499054700763795 12667.0 29.125364137931037 0.0 - - - - - - - 333.0 25 3 SMC1A structural maintenance of chromosomes 1A 3911 492 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A137.[MT7]-NMDAIIVDSEK[MT7].3b3_1.heavy 508.272 / 505.22 9333.0 30.162599563598633 43 13 10 10 10 3.8959192964358818 25.66788282587973 0.0 3 0.927324498626629 4.5499054700763795 9333.0 39.357593500547026 0.0 - - - - - - - 333.0 18 4 SMC1A structural maintenance of chromosomes 1A 3913 493 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A241.[MT7]-IIDPDEEK[MT7].2y4_1.heavy 623.842 / 664.327 3189.0 23.981199264526367 48 18 10 10 10 2.297410246259143 32.36143055964252 0.0 3 0.9829439838170135 9.436356782841754 3189.0 0.5865586230685966 3.0 - - - - - - - 290.0 6 5 PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2 3915 493 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A241.[MT7]-IIDPDEEK[MT7].2y5_1.heavy 623.842 / 761.38 87850.0 23.981199264526367 48 18 10 10 10 2.297410246259143 32.36143055964252 0.0 3 0.9829439838170135 9.436356782841754 87850.0 76.98048491041403 0.0 - - - - - - - 290.0 175 2 PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2 3917 493 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A241.[MT7]-IIDPDEEK[MT7].2y3_1.heavy 623.842 / 549.3 18556.0 23.981199264526367 48 18 10 10 10 2.297410246259143 32.36143055964252 0.0 3 0.9829439838170135 9.436356782841754 18556.0 27.703902990290107 0.0 - - - - - - - 745.7142857142857 37 7 PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2 3919 493 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A241.[MT7]-IIDPDEEK[MT7].2y6_1.heavy 623.842 / 876.407 24065.0 23.981199264526367 48 18 10 10 10 2.297410246259143 32.36143055964252 0.0 3 0.9829439838170135 9.436356782841754 24065.0 58.71030172413792 0.0 - - - - - - - 696.0 48 5 PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2 3921 494 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A242.[MT7]-C[CAM]EILQSDSR.2b3_1.heavy 626.31 / 547.267 6081.0 22.19730043411255 46 20 10 6 10 5.1010580732232516 15.647915107689645 0.03880119323730469 3 0.9918783539031429 13.6850367629529 6081.0 9.485166300129551 0.0 - - - - - - - 661.0 12 10 KEAP1 kelch-like ECH-associated protein 1 3923 494 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A242.[MT7]-C[CAM]EILQSDSR.2y8_1.heavy 626.31 / 947.479 4759.0 22.19730043411255 46 20 10 6 10 5.1010580732232516 15.647915107689645 0.03880119323730469 3 0.9918783539031429 13.6850367629529 4759.0 24.696325757575757 0.0 - - - - - - - 264.0 9 5 KEAP1 kelch-like ECH-associated protein 1 3925 494 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A242.[MT7]-C[CAM]EILQSDSR.2y5_1.heavy 626.31 / 592.268 5023.0 22.19730043411255 46 20 10 6 10 5.1010580732232516 15.647915107689645 0.03880119323730469 3 0.9918783539031429 13.6850367629529 5023.0 10.180269783709736 0.0 - - - - - - - 617.0 10 9 KEAP1 kelch-like ECH-associated protein 1 3927 494 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A242.[MT7]-C[CAM]EILQSDSR.2y6_1.heavy 626.31 / 705.353 3966.0 22.19730043411255 46 20 10 6 10 5.1010580732232516 15.647915107689645 0.03880119323730469 3 0.9918783539031429 13.6850367629529 3966.0 6.501639344262296 0.0 - - - - - - - 717.5714285714286 7 7 KEAP1 kelch-like ECH-associated protein 1 3929 495 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A246.[MT7]-DALLNWLK[MT7].2b4_1.heavy 630.881 / 557.341 15355.0 40.23747444152832 46 20 10 6 10 10.863712217060884 9.204956648516085 0.03769683837890625 3 0.9962609265609346 20.176459394285487 15355.0 28.838027697297193 0.0 - - - - - - - 406.3636363636364 30 11 PIK3CB;PIK3CD phosphoinositide-3-kinase, catalytic, beta polypeptide;phosphoinositide-3-kinase, catalytic, delta polypeptide 3931 495 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A246.[MT7]-DALLNWLK[MT7].2y3_1.heavy 630.881 / 590.378 7901.0 40.23747444152832 46 20 10 6 10 10.863712217060884 9.204956648516085 0.03769683837890625 3 0.9962609265609346 20.176459394285487 7901.0 4.798733233979136 1.0 - - - - - - - 322.8333333333333 15 12 PIK3CB;PIK3CD phosphoinositide-3-kinase, catalytic, beta polypeptide;phosphoinositide-3-kinase, catalytic, delta polypeptide 3933 495 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A246.[MT7]-DALLNWLK[MT7].2b5_1.heavy 630.881 / 671.385 12672.0 40.23747444152832 46 20 10 6 10 10.863712217060884 9.204956648516085 0.03769683837890625 3 0.9962609265609346 20.176459394285487 12672.0 25.13994073698873 0.0 - - - - - - - 310.4166666666667 25 12 PIK3CB;PIK3CD phosphoinositide-3-kinase, catalytic, beta polypeptide;phosphoinositide-3-kinase, catalytic, delta polypeptide 3935 495 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A246.[MT7]-DALLNWLK[MT7].2y7_1.heavy 630.881 / 1001.63 5814.0 40.23747444152832 46 20 10 6 10 10.863712217060884 9.204956648516085 0.03769683837890625 3 0.9962609265609346 20.176459394285487 5814.0 34.53281879194631 0.0 - - - - - - - 279.375 11 8 PIK3CB;PIK3CD phosphoinositide-3-kinase, catalytic, beta polypeptide;phosphoinositide-3-kinase, catalytic, delta polypeptide 3937 496 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A248.[MT7]-GPDAC[CAM]QILTR.2y8_1.heavy 637.836 / 976.488 5409.0 25.914100646972656 50 20 10 10 10 53.61260924865392 1.8652328510295506 0.0 3 0.9957227901433325 18.863712612856258 5409.0 19.557286871480787 0.0 - - - - - - - 318.0 10 2 CCNA1 cyclin A1 3939 496 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A248.[MT7]-GPDAC[CAM]QILTR.2y9_1.heavy 637.836 / 1073.54 24499.0 25.914100646972656 50 20 10 10 10 53.61260924865392 1.8652328510295506 0.0 3 0.9957227901433325 18.863712612856258 24499.0 87.04747884128093 0.0 - - - - - - - 318.0 48 3 CCNA1 cyclin A1 3941 496 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A248.[MT7]-GPDAC[CAM]QILTR.2b6_1.heavy 637.836 / 773.337 15590.0 25.914100646972656 50 20 10 10 10 53.61260924865392 1.8652328510295506 0.0 3 0.9957227901433325 18.863712612856258 15590.0 34.090957301092224 0.0 - - - - - - - 318.0 31 8 CCNA1 cyclin A1 3943 496 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A248.[MT7]-GPDAC[CAM]QILTR.2y7_1.heavy 637.836 / 861.461 51226.0 25.914100646972656 50 20 10 10 10 53.61260924865392 1.8652328510295506 0.0 3 0.9957227901433325 18.863712612856258 51226.0 117.88703179978953 0.0 - - - - - - - 727.1428571428571 102 7 CCNA1 cyclin A1 3945 497 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A105.[MT7]-NTNAETR.2y5_1.heavy 475.245 / 590.289 3800.0 12.205699920654297 45 17 10 8 10 3.2866241899629736 24.08512957038224 0.012599945068359375 3 0.9769560903660454 8.114219564712307 3800.0 6.007905138339922 1.0 - - - - - - - 148.36363636363637 17 55 PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2 3947 497 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A105.[MT7]-NTNAETR.2b4_1.heavy 475.245 / 545.28 7297.0 12.205699920654297 45 17 10 8 10 3.2866241899629736 24.08512957038224 0.012599945068359375 3 0.9769560903660454 8.114219564712307 7297.0 7.189162561576353 0.0 - - - - - - - 134.01694915254237 14 59 PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2 3949 497 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A105.[MT7]-NTNAETR.2y6_1.heavy 475.245 / 691.337 10894.0 12.205699920654297 45 17 10 8 10 3.2866241899629736 24.08512957038224 0.012599945068359375 3 0.9769560903660454 8.114219564712307 10894.0 30.47346978557505 0.0 - - - - - - - 726.3333333333334 21 21 PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2 3951 497 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A105.[MT7]-NTNAETR.2b5_1.heavy 475.245 / 674.323 14694.0 12.205699920654297 45 17 10 8 10 3.2866241899629736 24.08512957038224 0.012599945068359375 3 0.9769560903660454 8.114219564712307 14694.0 34.8934794071123 0.0 - - - - - - - 178.3148148148148 29 54 PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2 3953 498 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A100.[MT7]-QAQDLAR.2y5_1.heavy 473.265 / 602.326 14918.0 16.77560043334961 50 20 10 10 10 13.191888923386403 7.580415555404 0.0 3 0.9984823326793972 31.6751833096694 14918.0 53.97467336683417 0.0 - - - - - - - 331.6666666666667 29 6 HRAS;KRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog;v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog 3955 498 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A100.[MT7]-QAQDLAR.2b4_1.heavy 473.265 / 587.291 85925.0 16.77560043334961 50 20 10 10 10 13.191888923386403 7.580415555404 0.0 3 0.9984823326793972 31.6751833096694 85925.0 196.19492036331079 0.0 - - - - - - - 199.0 171 1 HRAS;KRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog;v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog 3957 498 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A100.[MT7]-QAQDLAR.2y6_1.heavy 473.265 / 673.363 71008.0 16.77560043334961 50 20 10 10 10 13.191888923386403 7.580415555404 0.0 3 0.9984823326793972 31.6751833096694 71008.0 128.4630895951932 0.0 - - - - - - - 707.5555555555555 142 9 HRAS;KRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog;v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog 3959 498 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A100.[MT7]-QAQDLAR.2b5_1.heavy 473.265 / 700.375 22277.0 16.77560043334961 50 20 10 10 10 13.191888923386403 7.580415555404 0.0 3 0.9984823326793972 31.6751833096694 22277.0 109.45798950997421 0.0 - - - - - - - 199.0 44 4 HRAS;KRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog;v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog 3961 499 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A102.[MT7]-EVIVAK[MT7].2y4_1.heavy 473.812 / 574.404 79770.0 21.940799713134766 43 13 10 10 10 1.426709786814712 57.376945769258406 0.0 3 0.9183982348569575 4.290561426748799 79770.0 75.5940421162524 0.0 - - - - - - - 658.5 159 4 AKT1 v-akt murine thymoma viral oncogene homolog 1 3963 499 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A102.[MT7]-EVIVAK[MT7].2b3_1.heavy 473.812 / 486.304 49494.0 21.940799713134766 43 13 10 10 10 1.426709786814712 57.376945769258406 0.0 3 0.9183982348569575 4.290561426748799 49494.0 58.52533313416292 0.0 - - - - - - - 1165.7142857142858 98 7 AKT1 v-akt murine thymoma viral oncogene homolog 1 3965 499 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A102.[MT7]-EVIVAK[MT7].2y5_1.heavy 473.812 / 673.473 57392.0 21.940799713134766 43 13 10 10 10 1.426709786814712 57.376945769258406 0.0 3 0.9183982348569575 4.290561426748799 57392.0 42.505702260985245 0.0 - - - - - - - 1165.7142857142858 114 7 AKT1 v-akt murine thymoma viral oncogene homolog 1 3967 499 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A102.[MT7]-EVIVAK[MT7].2y2_1.heavy 473.812 / 362.252 97409.0 21.940799713134766 43 13 10 10 10 1.426709786814712 57.376945769258406 0.0 3 0.9183982348569575 4.290561426748799 97409.0 91.08293295859849 2.0 - - - - - - - 702.3333333333334 194 3 AKT1 v-akt murine thymoma viral oncogene homolog 1 3969 500 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A253.[MT7]-SALGITVHQGR.3y6_1.heavy 428.25 / 697.374 26388.0 22.773399353027344 46 16 10 10 10 3.146065628640812 24.366605358182568 0.0 3 0.9666602918867919 6.740116841894583 26388.0 62.68719975607362 0.0 - - - - - - - 269.0 52 7 KEAP1 kelch-like ECH-associated protein 1 3971 500 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A253.[MT7]-SALGITVHQGR.3b4_1.heavy 428.25 / 473.284 67316.0 22.773399353027344 46 16 10 10 10 3.146065628640812 24.366605358182568 0.0 3 0.9666602918867919 6.740116841894583 67316.0 79.66146801610245 0.0 - - - - - - - 269.0 134 4 KEAP1 kelch-like ECH-associated protein 1 3973 500 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A253.[MT7]-SALGITVHQGR.3y4_1.heavy 428.25 / 497.258 92895.0 22.773399353027344 46 16 10 10 10 3.146065628640812 24.366605358182568 0.0 3 0.9666602918867919 6.740116841894583 92895.0 114.55052147831672 0.0 - - - - - - - 1192.2857142857142 185 7 KEAP1 kelch-like ECH-associated protein 1 3975 500 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A253.[MT7]-SALGITVHQGR.3y5_1.heavy 428.25 / 596.326 19387.0 22.773399353027344 46 16 10 10 10 3.146065628640812 24.366605358182568 0.0 3 0.9666602918867919 6.740116841894583 19387.0 27.366493313521545 0.0 - - - - - - - 269.0 38 5 KEAP1 kelch-like ECH-associated protein 1 3977 501 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A250.[MT7]-DDTDPGQLK[MT7].3b6_1.heavy 426.226 / 745.312 N/A N/A - - - - - - - - - 0.0 - - - - - - - ORC5 origin recognition complex, subunit 5 3979 501 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A250.[MT7]-DDTDPGQLK[MT7].3b4_1.heavy 426.226 / 591.238 N/A N/A - - - - - - - - - 0.0 - - - - - - - ORC5 origin recognition complex, subunit 5 3981 501 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A250.[MT7]-DDTDPGQLK[MT7].3y4_1.heavy 426.226 / 589.379 N/A N/A - - - - - - - - - 0.0 - - - - - - - ORC5 origin recognition complex, subunit 5 3983 501 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A250.[MT7]-DDTDPGQLK[MT7].3b3_1.heavy 426.226 / 476.211 N/A N/A - - - - - - - - - 0.0 - - - - - - - ORC5 origin recognition complex, subunit 5 3985 502 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A257.[MT7]-LAEIIWQNR.2y8_1.heavy 643.87 / 1029.55 82114.0 36.386199951171875 47 17 10 10 10 4.207749281751806 23.765674545696115 0.0 3 0.9790911361658147 8.519959258425237 82114.0 380.15701838017924 0.0 - - - - - - - 299.0 164 9 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 3987 502 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A257.[MT7]-LAEIIWQNR.2y5_1.heavy 643.87 / 716.384 53621.0 36.386199951171875 47 17 10 10 10 4.207749281751806 23.765674545696115 0.0 3 0.9790911361658147 8.519959258425237 53621.0 61.62176340142974 0.0 - - - - - - - 256.14285714285717 107 7 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 3989 502 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A257.[MT7]-LAEIIWQNR.2b4_1.heavy 643.87 / 571.357 50928.0 36.386199951171875 47 17 10 10 10 4.207749281751806 23.765674545696115 0.0 3 0.9790911361658147 8.519959258425237 50928.0 59.64303739687384 0.0 - - - - - - - 729.0 101 8 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 3991 502 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A257.[MT7]-LAEIIWQNR.2y6_1.heavy 643.87 / 829.468 36570.0 36.386199951171875 47 17 10 10 10 4.207749281751806 23.765674545696115 0.0 3 0.9790911361658147 8.519959258425237 36570.0 73.09832873056284 0.0 - - - - - - - 757.0 73 8 STAT5A;STAT5B signal transducer and activator of transcription 5A;signal transducer and activator of transcription 5B 3993 503 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A256.[MT7]-ERPQDVDQR.3b5_1.heavy 429.557 / 770.391 11322.0 14.888299942016602 44 14 10 10 10 2.1297028780580445 39.75625181907813 0.0 3 0.9382514374659933 4.9406996174763025 11322.0 100.23936305732484 0.0 - - - - - - - 314.3333333333333 22 6 AKT1 v-akt murine thymoma viral oncogene homolog 1 3995 503 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A256.[MT7]-ERPQDVDQR.3b3_1.heavy 429.557 / 527.306 14467.0 14.888299942016602 44 14 10 10 10 2.1297028780580445 39.75625181907813 0.0 3 0.9382514374659933 4.9406996174763025 14467.0 44.14908871350326 0.0 - - - - - - - 314.27272727272725 28 11 AKT1 v-akt murine thymoma viral oncogene homolog 1 3997 503 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A256.[MT7]-ERPQDVDQR.3y5_1.heavy 429.557 / 632.3 14938.0 14.888299942016602 44 14 10 10 10 2.1297028780580445 39.75625181907813 0.0 3 0.9382514374659933 4.9406996174763025 14938.0 104.64177825318876 0.0 - - - - - - - 247.0 29 7 AKT1 v-akt murine thymoma viral oncogene homolog 1 3999 503 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A256.[MT7]-ERPQDVDQR.3b7_2.heavy 429.557 / 492.747 294520.0 14.888299942016602 44 14 10 10 10 2.1297028780580445 39.75625181907813 0.0 3 0.9382514374659933 4.9406996174763025 294520.0 453.47988165009696 0.0 - - - - - - - 288.0 589 6 AKT1 v-akt murine thymoma viral oncogene homolog 1 4001 504 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A255.[MT7]-GTDELYAVK[MT7].2y4_1.heavy 642.358 / 624.384 19311.0 25.775400161743164 46 16 10 10 10 1.962618806542778 35.2804920838402 0.0 3 0.9649874350221218 6.576200498043635 19311.0 11.435649427556257 0.0 - - - - - - - 1763.5714285714287 38 7 PRKCB protein kinase C, beta 4003 504 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A255.[MT7]-GTDELYAVK[MT7].2y5_1.heavy 642.358 / 737.468 7281.0 25.775400161743164 46 16 10 10 10 1.962618806542778 35.2804920838402 0.0 3 0.9649874350221218 6.576200498043635 7281.0 4.40687061692135 1.0 - - - - - - - 317.0 15 5 PRKCB protein kinase C, beta 4005 504 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A255.[MT7]-GTDELYAVK[MT7].2b4_1.heavy 642.358 / 547.248 16462.0 25.775400161743164 46 16 10 10 10 1.962618806542778 35.2804920838402 0.0 3 0.9649874350221218 6.576200498043635 16462.0 25.992631578947368 0.0 - - - - - - - 814.1428571428571 32 7 PRKCB protein kinase C, beta 4007 504 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A255.[MT7]-GTDELYAVK[MT7].2b5_1.heavy 642.358 / 660.332 25326.0 25.775400161743164 46 16 10 10 10 1.962618806542778 35.2804920838402 0.0 3 0.9649874350221218 6.576200498043635 25326.0 60.80135185831878 0.0 - - - - - - - 696.4 50 10 PRKCB protein kinase C, beta 4009 505 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A10716.[MT7]-LVDAEEVAR.2y8_1.heavy 573.318 / 888.442 105679.0 25.548500061035156 50 20 10 10 10 7.832764043507322 12.766885283987492 0.0 3 0.9961763275475307 19.951867326682592 105679.0 118.4354052846412 1.0 - - - - - - - 746.0 211 5 ELK1 ELK1, member of ETS oncogene family 4011 505 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A10716.[MT7]-LVDAEEVAR.2b6_1.heavy 573.318 / 801.411 32947.0 25.548500061035156 50 20 10 10 10 7.832764043507322 12.766885283987492 0.0 3 0.9961763275475307 19.951867326682592 32947.0 152.0223311897106 0.0 - - - - - - - 311.0 65 2 ELK1 ELK1, member of ETS oncogene family 4013 505 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A10716.[MT7]-LVDAEEVAR.2y6_1.heavy 573.318 / 674.347 104435.0 25.548500061035156 50 20 10 10 10 7.832764043507322 12.766885283987492 0.0 3 0.9961763275475307 19.951867326682592 104435.0 107.53881869744703 0.0 - - - - - - - 777.0 208 6 ELK1 ELK1, member of ETS oncogene family 4015 505 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A10716.[MT7]-LVDAEEVAR.2y7_1.heavy 573.318 / 789.374 76462.0 25.548500061035156 50 20 10 10 10 7.832764043507322 12.766885283987492 0.0 3 0.9961763275475307 19.951867326682592 76462.0 78.55782510584119 0.0 - - - - - - - 311.0 152 4 ELK1 ELK1, member of ETS oncogene family 4017 506 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A258.[MT7]-MQYGLFLK[MT7].2y5_1.heavy 644.372 / 721.473 8044.0 35.838600158691406 41 11 10 10 10 1.2634565254786705 47.208123633648604 0.0 3 0.8528324578617282 3.1767303457309013 8044.0 15.16899622738621 1.0 - - - - - - - 304.42857142857144 16 7 PRIM2 primase, DNA, polypeptide 2 (58kDa) 4019 506 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A258.[MT7]-MQYGLFLK[MT7].2b4_1.heavy 644.372 / 624.293 4968.0 35.838600158691406 41 11 10 10 10 1.2634565254786705 47.208123633648604 0.0 3 0.8528324578617282 3.1767303457309013 4968.0 7.035645415835393 1.0 - - - - - - - 844.8571428571429 9 7 PRIM2 primase, DNA, polypeptide 2 (58kDa) 4021 506 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A258.[MT7]-MQYGLFLK[MT7].2y3_1.heavy 644.372 / 551.367 8044.0 35.838600158691406 41 11 10 10 10 1.2634565254786705 47.208123633648604 0.0 3 0.8528324578617282 3.1767303457309013 8044.0 23.978942917547567 0.0 - - - - - - - 425.8 16 10 PRIM2 primase, DNA, polypeptide 2 (58kDa) 4023 506 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A258.[MT7]-MQYGLFLK[MT7].2y7_1.heavy 644.372 / 1012.59 8754.0 35.838600158691406 41 11 10 10 10 1.2634565254786705 47.208123633648604 0.0 3 0.8528324578617282 3.1767303457309013 8754.0 23.68947145877378 0.0 - - - - - - - 378.6 17 10 PRIM2 primase, DNA, polypeptide 2 (58kDa) 4025 507 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A117.[MT7]-VLQSLLR.2y5_1.heavy 486.82 / 616.378 96954.0 34.64440155029297 48 18 10 10 10 3.843142068915806 26.020375569465 0.0 3 0.9864671593886143 10.596852683671251 96954.0 178.97924859382857 0.0 - - - - - - - 258.0 193 5 CCND3 cyclin D3 4027 507 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A117.[MT7]-VLQSLLR.2b4_1.heavy 486.82 / 572.352 44609.0 34.64440155029297 48 18 10 10 10 3.843142068915806 26.020375569465 0.0 3 0.9864671593886143 10.596852683671251 44609.0 90.51144217719803 0.0 - - - - - - - 258.0 89 8 CCND3 cyclin D3 4029 507 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A117.[MT7]-VLQSLLR.2y6_1.heavy 486.82 / 729.462 214021.0 34.64440155029297 48 18 10 10 10 3.843142068915806 26.020375569465 0.0 3 0.9864671593886143 10.596852683671251 214021.0 787.8931219064274 1.0 - - - - - - - 258.0 507 3 CCND3 cyclin D3 4031 507 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A117.[MT7]-VLQSLLR.2y1_1.heavy 486.82 / 175.119 108300.0 34.64440155029297 48 18 10 10 10 3.843142068915806 26.020375569465 0.0 3 0.9864671593886143 10.596852683671251 108300.0 45.60283425062974 0.0 - - - - - - - 258.0 216 2 CCND3 cyclin D3 4033 508 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A116.[MT7]-LVIDVIR.2y5_1.heavy 486.322 / 615.382 51259.0 34.860599517822266 46 20 8 10 8 22.720141410359382 4.401381056299431 0.0 4 0.9994082203861181 50.729543020609825 51259.0 46.26135960591133 1.0 - - - - - - - 254.0 102 5 SMC1A structural maintenance of chromosomes 1A 4035 508 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A116.[MT7]-LVIDVIR.2b4_1.heavy 486.322 / 585.373 75366.0 34.860599517822266 46 20 8 10 8 22.720141410359382 4.401381056299431 0.0 4 0.9994082203861181 50.729543020609825 75366.0 301.6842231100423 0.0 - - - - - - - 254.0 150 2 SMC1A structural maintenance of chromosomes 1A 4037 508 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A116.[MT7]-LVIDVIR.2y6_1.heavy 486.322 / 714.451 113176.0 34.860599517822266 46 20 8 10 8 22.720141410359382 4.401381056299431 0.0 4 0.9994082203861181 50.729543020609825 113176.0 154.66422030917366 1.0 - - - - - - - 254.0 321 1 SMC1A structural maintenance of chromosomes 1A 4039 508 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A116.[MT7]-LVIDVIR.2b5_1.heavy 486.322 / 684.441 22331.0 34.860599517822266 46 20 8 10 8 22.720141410359382 4.401381056299431 0.0 4 0.9994082203861181 50.729543020609825 22331.0 83.35998886934145 1.0 - - - - - - - 254.0 55 3 SMC1A structural maintenance of chromosomes 1A 4041 509 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A115.[MT7]-YFLLK[MT7].2b3_1.heavy 486.312 / 568.325 55052.0 34.64440155029297 50 20 10 10 10 13.382175923437167 7.472626318180649 0.0 3 0.9970766218978446 22.81991475054455 55052.0 131.15905713812234 0.0 - - - - - - - 260.0 110 2 AKT3;AKT1;AKT2;C1GALT1C1;QRICH1 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 1;v-akt murine thymoma viral oncogene homolog 2;C1GALT1-specific chaperone 1;glutamine-rich 1 4043 509 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A115.[MT7]-YFLLK[MT7].2y4_1.heavy 486.312 / 664.451 162560.0 34.64440155029297 50 20 10 10 10 13.382175923437167 7.472626318180649 0.0 3 0.9970766218978446 22.81991475054455 162560.0 370.8054044870211 0.0 - - - - - - - 605.6666666666666 325 3 AKT3;AKT1;AKT2;C1GALT1C1;QRICH1 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 1;v-akt murine thymoma viral oncogene homolog 2;C1GALT1-specific chaperone 1;glutamine-rich 1 4045 509 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A115.[MT7]-YFLLK[MT7].2b4_1.heavy 486.312 / 681.409 16360.0 34.64440155029297 50 20 10 10 10 13.382175923437167 7.472626318180649 0.0 3 0.9970766218978446 22.81991475054455 16360.0 31.776952623414925 0.0 - - - - - - - 260.0 32 2 AKT3;AKT1;AKT2;C1GALT1C1;QRICH1 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 1;v-akt murine thymoma viral oncogene homolog 2;C1GALT1-specific chaperone 1;glutamine-rich 1 4047 509 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A115.[MT7]-YFLLK[MT7].2y3_1.heavy 486.312 / 517.383 89330.0 34.64440155029297 50 20 10 10 10 13.382175923437167 7.472626318180649 0.0 3 0.9970766218978446 22.81991475054455 89330.0 132.40072398079928 0.0 - - - - - - - 260.0 178 3 AKT3;AKT1;AKT2;C1GALT1C1;QRICH1 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma);v-akt murine thymoma viral oncogene homolog 1;v-akt murine thymoma viral oncogene homolog 2;C1GALT1-specific chaperone 1;glutamine-rich 1 4049 510 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A114.[MT7]-SLDFGMR.2y4_1.heavy 485.251 / 510.249 60667.0 29.612499237060547 48 18 10 10 10 24.002062211224327 4.166308674645297 0.0 3 0.9892608367767154 11.898376779608151 60667.0 140.09802113943027 0.0 - - - - - - - 333.0 121 3 SHC4 SHC (Src homology 2 domain containing) family, member 4 4051 510 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A114.[MT7]-SLDFGMR.2b4_1.heavy 485.251 / 607.321 1667.0 29.612499237060547 48 18 10 10 10 24.002062211224327 4.166308674645297 0.0 3 0.9892608367767154 11.898376779608151 1667.0 4.379598052666319 3.0 - - - - - - - 333.0 6 2 SHC4 SHC (Src homology 2 domain containing) family, member 4 4053 510 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A114.[MT7]-SLDFGMR.2y6_1.heavy 485.251 / 738.36 15333.0 29.612499237060547 48 18 10 10 10 24.002062211224327 4.166308674645297 0.0 3 0.9892608367767154 11.898376779608151 15333.0 64.42854653754203 0.0 - - - - - - - 333.0 30 1 SHC4 SHC (Src homology 2 domain containing) family, member 4 4055 510 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A114.[MT7]-SLDFGMR.2b5_1.heavy 485.251 / 664.342 10667.0 29.612499237060547 48 18 10 10 10 24.002062211224327 4.166308674645297 0.0 3 0.9892608367767154 11.898376779608151 10667.0 47.06598655627141 0.0 - - - - - - - 333.0 21 8 SHC4 SHC (Src homology 2 domain containing) family, member 4 4057 511 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A112.[MT7]-NLTSIK[MT7].2y4_1.heavy 482.307 / 592.379 69009.0 23.0718994140625 48 18 10 10 10 3.2368893342390135 24.606517712434673 0.0 3 0.9843602773480281 9.855534799318628 69009.0 89.8992506190647 0.0 - - - - - - - 587.1428571428571 138 7 UBE3B ubiquitin protein ligase E3B 4059 511 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A112.[MT7]-NLTSIK[MT7].2y5_1.heavy 482.307 / 705.463 51209.0 23.0718994140625 48 18 10 10 10 3.2368893342390135 24.606517712434673 0.0 3 0.9843602773480281 9.855534799318628 51209.0 78.93480367298065 0.0 - - - - - - - 274.0 102 6 UBE3B ubiquitin protein ligase E3B 4061 511 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A112.[MT7]-NLTSIK[MT7].2y3_1.heavy 482.307 / 491.331 41898.0 23.0718994140625 48 18 10 10 10 3.2368893342390135 24.606517712434673 0.0 3 0.9843602773480281 9.855534799318628 41898.0 13.411145842963792 2.0 - - - - - - - 587.1428571428571 89 7 UBE3B ubiquitin protein ligase E3B 4063 511 20120510_pMRM_Cell_cycle_and_ub_set02_01 20120510_pMRM_Cell_cycle_and_ub_set02_01 A112.[MT7]-NLTSIK[MT7].2y1_1.heavy 482.307 / 291.215 N/A 23.0718994140625 48 18 10 10 10 3.2368893342390135 24.606517712434673 0.0 3 0.9843602773480281 9.855534799318628 53674.0 10.976278118609407 0.0 - - - - - - - 1643.0 107 1 UBE3B ubiquitin protein ligase E3B