Sequence Modifications Mass Mass Fractional Part Protein Groups Proteins Gene Names Protein Names Unique (Groups) Unique (Proteins) Acetyl (Protein N-term) GlyGly (K) Oxidation (M) QQTGG (K) Missed cleavages Identification type Sh-c-flag-1 Identification type Sh-c-flag-2 Identification type Sh-c-flag-3 Identification type Sh-c-G-1 Identification type Sh-c-G-2 Identification type Sh-c-G-3 Identification type Sh-H9-Flag-1 Identification type Sh-H9-Flag-2 Identification type Sh-H9-Flag-3 Identification type Sh-H9-G-1 Identification type Sh-H9-G-2 Identification type Sh-H9-G-3 Experiment Sh-c-flag-1 Experiment Sh-c-flag-2 Experiment Sh-c-flag-3 Experiment Sh-c-G-1 Experiment Sh-c-G-2 Experiment Sh-c-G-3 Experiment Sh-H9-Flag-1 Experiment Sh-H9-Flag-2 Experiment Sh-H9-Flag-3 Experiment Sh-H9-G-1 Experiment Sh-H9-G-2 Experiment Sh-H9-G-3 Retention time Calibrated retention time Charges PEP MS/MS scan number Raw file Score Delta score Intensity Intensity Sh-c-flag-1 Intensity Sh-c-flag-2 Intensity Sh-c-flag-3 Intensity Sh-c-G-1 Intensity Sh-c-G-2 Intensity Sh-c-G-3 Intensity Sh-H9-Flag-1 Intensity Sh-H9-Flag-2 Intensity Sh-H9-Flag-3 Intensity Sh-H9-G-1 Intensity Sh-H9-G-2 Intensity Sh-H9-G-3 Reverse Potential contaminant id Protein group IDs Peptide ID Evidence IDs MS/MS IDs Best MS/MS GlyGly (K) site IDs Oxidation (M) site IDs QQTGG (K) site IDs MS/MS Count AAAAAAAAAAGAAGGR Acetyl (Protein N-term) 1239.632 0.63199703 603 Q86U42;Q86U42-2 PABPN1 Polyadenylate-binding protein 2 yes no 1 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 65.299 68.857 2 0.0022033 12818 Miao_Sh-c_proteinG_mass3_141226_01 54.094 43.336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 603 0 0;1 0;1 0 2 AAAAAAAAAPAAAATAPTTAATTAATAAQ Unmodified 2367.203 0.2030165 440 P37108;H0YLW0 SRP14 Signal recognition particle 14 kDa protein yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 3 2 2 1 1 2 1 2 2 3 60.863 62.726 3;4 1.4529E-09 17834 Miao_Sh-H9_proteinG_mass3_141226_02 57.238 49.113 118920 0 0 0 13060 15493 14179 9310.4 10841 11087 15392 10874 18680 1 440 1 2;3;4;5;6;7;8;9;10;11;12;13;14;15;16;17;18;19;20;21;22 2;3;4;5;6;7;8;9;10;11;12;13;14;15;16;17;18;19;20;21;22;23;24;25;26;27;28;29;30;31;32;33;34 28 32 AAAAAAALQAK Unmodified 955.54508 0.5450795 438 P36578;H3BM89;H3BU31 RPL4 60S ribosomal protein L4 yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1 1 2 33.909 35.492 2 8.7185E-17 6777 Miao_Sh-H9_proteinG_mass3_141226_03 145.9 107.11 12849 495.18 0 490.52 0 419.32 4937.4 505.21 557.21 0 0 5444.3 0 2 438 2 23;24;25;26;27;28;29;30;31;32;33;34 35;36;37;38;39;40;41;42;43;44 43 10 AAAAAATAAAAASIR Acetyl (Protein N-term) 1298.6943 0.69426293 193 Q8WVM8;G3V3K9;G3V4I1;G3V5F3;J3KNG4 SCFD1 Sec1 family domain-containing protein 1 yes no 1 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 85.652 73.471 2 3.668E-08 25866 Miao_Sh-H9_proteinG_mass3_141226_01 91.076 72.404 0 0 0 0 0 0 0 0 0 0 0 0 0 3 193 3 35 45 45 1 AAAAAEQQQFYLLLGNLLSPDNVVR Acetyl (Protein N-term) 2742.4341 0.43407907 52 O00410;C9JZD8;E7EQT5;E7ETV3;B4E0R6 IPO5 Importin-5 yes no 1 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 122.59 122.94 3 0.0003213 30385 Miao_Sh-c_Flag_mass3_141226_02 45.099 40.222 0 0 0 0 0 0 0 0 0 0 0 0 0 4 52 4 36 46 46 1 AAAAELSLLEK Acetyl (Protein N-term) 1156.634 0.63395409 73 O43324;D6RBD7;C9J1V9;O43324-2 EEF1E1;EEF1E1-BLOC1S5 Eukaryotic translation elongation factor 1 epsilon-1 yes no 1 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 2 1 1 90.6 77.492 2 0.0014148 28684 Miao_Sh-H9_proteinG_mass3_141226_01 77.597 50.938 3079.8 0 0 0 0 0 0 0 0 0 0 1780.6 1299.2 5 73 5 37;38;39;40 47;48;49 47 3 AAAASAAEAGIATTGTEDSDDALLK Unmodified 2319.1078 0.10777871 481 P55036;H0Y3Y9 PSMD4 26S proteasome non-ATPase regulatory subunit 4 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 2 1 1 2 1 66.85 65.38 3 9.0789E-07 12003 Miao_Sh-H9_Flag_mass3_141226_01 58.938 51.355 20409 2931.5 2451.9 2530.7 219.16 0 0 5723.9 0 6351.6 0 0 200.33 6 481 6 41;42;43;44;45;46;47;48;49 50;51;52 51 2 AAAAVVEFQR Acetyl (Protein N-term) 1102.5771 0.57710791 261 O00231;O00231-2;J3QRY4 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes no 1 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 70.509 69.957 2 0.00077199 12330 Miao_Sh-c_Flag_mass3_141226_02 104.39 81.815 4081 0 2022.5 0 0 0 531.19 0 0 0 0 0 1527.3 7 261 7 50;51;52;53 53;54 53 2 AAAEEEDGGPEGPNR Acetyl (Protein N-term) 1539.6437 0.6437435 123 Q99942;E7EM95 RNF5 E3 ubiquitin-protein ligase RNF5 yes no 1 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 42.013 42.481 2 1.9121E-05 4219 Miao_Sh-H9_Flag_mass3_141226_02 81.632 73.222 651.58 0 0 0 39.755 0 0 0 467.88 0 143.94 0 0 8 123 8 54;55;56;57;58;59 55;56;57;58 57 4 AAAHLTVIEK Unmodified 1051.6026 0.60259438 620 Q8WZ42;Q8WZ42-3;Q8WZ42-10;Q8WZ42-9;Q8WZ42-5;Q8WZ42-11;Q8WZ42-4;Q8WZ42-7;Q8WZ42-2;Q8WZ42-8;Q8WZ42-13;Q8WZ42-12 TTN Titin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 43.265 45.044 2 0.0082313 10108 Miao_Sh-H9_proteinG_mass3_141226_03 79.16 26.582 49104 2716.9 1703.8 0 1913.4 0 18676 4585.9 0 0 0 0 19508 9 620 9 60;61;62;63;64;65 59;60;61 60 3 AAASVTPPGSLELLQPGFSK Acetyl (Protein N-term) 2011.0626 0.062606842 555 Q12933;Q12933-4;Q12933-3;Q12933-2;B1AMY1;B1AMX7;B1AMX8;B1AMX9 TRAF2 TNF receptor-associated factor 2 yes no 1 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 2 1 1 2 1 93.957 93.937 2;3 1.9377E-13 19061 Miao_Sh-c_Flag_mass3_141226_03 119.76 106.05 13036 1928.8 0 2945.9 0 0 0 2745.5 1219.7 4196 0 0 0 10 555 10 66;67;68;69;70;71;72;73;74 62;63;64;65;66;67;68;69;70;71;72 67 11 AADAEAEVASLNR Unmodified 1315.6368 0.63680763 226 J3KN67;P06753 TPM3 Tropomyosin alpha-3 chain yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 44.421 47.028 2 5.0815E-14 11028 Miao_Sh-H9_proteinG_mass3_141226_02 143.42 1.843 0 0 0 0 0 0 0 0 0 0 0 0 0 11 226 11 75 73 73 1 AAEEAFVNDIDESSPGTEWER Unmodified 2351.019 0.018963706 348 P09496-2;P09496-5 CLTA Clathrin light chain A yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching 2 1 2 1 1 79.522 79.887 3 4.0643E-06 16161 Miao_Sh-H9_Flag_mass3_141226_01 63.606 54.599 10144 1771.6 1009.8 0 2301 0 0 2447.7 0 2613.7 0 0 0 12 348 12 76;77;78;79;80;81;82 74;75;76 76 3 AAELIANSLATAGDGLIELR Unmodified 1997.0793 0.079319539 85 P35232;C9JW96 PHB Prohibitin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 101.82 99.392 3 0.015197 23562 Miao_Sh-H9_Flag_mass3_141226_02 36.923 21.761 8457.5 0 0 2034.2 1434.8 0 0 0 4226.3 0 762.22 0 0 13 85 13 83;84;85;86 77 77 1 AAFDDAIAELDTLSEESYK Unmodified 2086.9583 0.95826093 500 P62258;P62258-2;K7EM20 YWHAE 14-3-3 protein epsilon yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 2 1 1 3 2 2 2 107.82 103.81 2;3 2.4141E-37 25287 Miao_Sh-H9_Flag_mass3_141226_03 148.97 129.4 41929 0 0 0 4714.1 7524.6 4634.9 4734.5 981.4 3482.7 10904 4952.5 0 14 500 14 87;88;89;90;91;92;93;94;95;96;97;98;99;100 78;79;80;81;82;83;84;85;86;87;88 85 10 AAGAAEAAVAAVEEVGSAGQFEELLR Acetyl (Protein N-term) 2557.266 0.26601069 299 O76003 GLRX3 Glutaredoxin-3 yes yes 1 0 0 0 0 By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 121.37 121.55 3 4.6944E-12 31046 Miao_Sh-H9_Flag_mass3_141226_01 65.428 56.958 8326.2 0 2864.5 0 2652.5 0 0 2809.2 0 0 0 0 0 15 299 15 101;102;103;104 89;90;91;92 91 3 AAGARPLTSPESLSR Unmodified 1511.8056 0.80560429 456 P46379;P46379-2;P46379-3 BAG6 Large proline-rich protein BAG6 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 45.687 46.013 3 0.0026004 4904 Miao_Sh-H9_Flag_mass3_141226_01 62.711 33.807 592.41 0 0 214.45 0 0 0 377.96 0 0 0 0 0 16 456 16 105;106 93 93 1 AAGTLYTYPENWR Acetyl (Protein N-term) 1582.7416 0.74160705 417 P26641 EEF1G Elongation factor 1-gamma yes yes 1 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By matching 1 1 2 1 1 1 1 85.518 85.618 2 3.2553E-05 16147 Miao_Sh-c_Flag_mass3_141226_03 93.348 73.707 13359 4803.6 0 723.96 0 0 0 5628.9 0 2202.7 0 0 0 17 417 17 107;108;109;110;111;112;113;114 94;95;96;97;98;99;100;101 97 8 AAGVEAAAEVAATEIK Acetyl (Protein N-term) 1541.7937 0.7937022 471 P52272;P52272-2;M0R019;M0R2T0;M0QYQ7;M0R0Y6;M0R0N3 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 1 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 2 1 3 1 1 2 3 2 3 1 3 94.934 91.211 2 1.0078E-22 31237 Miao_Sh-c_proteinG_mass3_141226_03 154.46 120.19 57503 781.4 5531.6 3956.3 8382 1296.1 10642 0 2124.9 8639 9500.1 607.3 6043 18 471 18 115;116;117;118;119;120;121;122;123;124;125;126;127;128;129;130;131;132;133;134;135;136;137;138 102;103;104;105;106;107;108;109;110;111;112;113;114;115;116;117;118;119 107 18 AAGVNVEPFWPGLFAK Unmodified 1701.8879 0.88787736 324 P05386 RPLP1 60S acidic ribosomal protein P1 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 2 2 2 1 6 2 2 99.489 100.38 2;3 6.988E-30 21632 Miao_Sh-c_Flag_mass3_141226_03 164.63 125 46861 3132 0 7866.6 16148 5168.6 0 0 5659.7 8886.2 0 0 0 19 324 19 139;140;141;142;143;144;145;146;147;148;149;150;151;152;153;154;155;156;157 120;121;122;123;124;125;126;127;128;129;130;131;132;133;134;135;136;137;138;139;140;141;142;143;144;145;146;147;148;149;150;151 125 32 AAIDWFDGK Unmodified 1021.4869 0.48689592 435 P35637;P35637-2;H3BPE7;Q92804;K7EPT6;Q92804-2 FUS;TAF15 RNA-binding protein FUS;TATA-binding protein-associated factor 2N yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 2 1 2 1 2 2 1 72.141 72.442 2 1.2171E-14 19389 Miao_Sh-c_proteinG_mass3_141226_03 161.27 41.651 77061 4447.3 0 2964.9 13935 13364 7974.1 9433.2 6734.3 6113.1 7499.5 0 4596.3 20 435 20 158;159;160;161;162;163;164;165;166;167;168;169;170;171 152;153;154;155;156;157;158;159;160;161;162;163;164;165;166 155 15 AALAATLEEYK Unmodified 1178.6183 0.61830402 184 Q69YQ0;F8WAN1;Q69YQ0-2;C9J8U1 SPECC1L;SPECC1L-ADORA2A Cytospin-A yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 64.611 65.062 2 0.0076816 18262 Miao_Sh-H9_proteinG_mass3_141226_01 69.721 50.062 0 0 0 0 0 0 0 0 0 0 0 0 0 21 184 21 172 167 167 1 AALEAVGGTVVLE Unmodified 1227.6711 0.67106787 474 P52815 MRPL12 39S ribosomal protein L12, mitochondrial yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 3 68.309 63.668 2 0.0088793 23053 Miao_Sh-H9_proteinG_mass3_141226_03 58.172 28.405 3560.4 874.61 0 0 0 0 0 0 0 0 393.69 885.51 1406.6 22 474 22 173;174;175;176;177;178 168;169;170;171 171 4 AALLETLSLLLAK Unmodified 1354.8436 0.84355293 626 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 115.51 115.91 2 0.014919 29633 Miao_Sh-H9_Flag_mass3_141226_02 53.448 48.554 0 0 0 0 0 0 0 0 0 0 0 0 0 23 626 23 179 172 172 1 AALLNQHYQVNFK Unmodified 1544.81 0.80996139 340 P07814;V9GYZ6 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 63.554 62.451 3 0.037356 10639 Miao_Sh-H9_Flag_mass3_141226_02 42.031 10.416 0 0 0 0 0 0 0 0 0 0 0 0 0 24 340 24 180 173 173 1 AALQELLSK Unmodified 971.56515 0.56514624 515 P62851 RPS25 40S ribosomal protein S25 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 1 1 1 1 6 2 68.57 67.292 2 1.6045E-57 16339 Miao_Sh-c_proteinG_mass3_141226_03 185.61 96.529 243690 0 8061.8 7955.4 18993 13216 0 17939 23658 19230 56844 41580 36210 25 515 25 181;182;183;184;185;186;187;188;189;190;191;192;193;194;195;196;197;198;199 174;175;176;177;178;179;180;181;182;183;184;185;186;187;188;189;190;191;192;193;194;195;196;197;198;199;200;201;202;203;204;205;206;207;208;209;210;211;212;213;214 186 41 AALRPLVK Unmodified 866.57017 0.57017204 181 P62910;F8W727;D3YTB1;D3YTI8 RPL32 60S ribosomal protein L32 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 34.525 36.579 2 0.051484 6782 Miao_Sh-c_proteinG_mass3_141226_03 93.561 63.141 5363.3 0 0 346.04 0 0 5004 0 13.282 0 0 0 0 26 181 26 200;201;202 215 215 1 AALRPLVKPK Unmodified 1091.7179 0.71789891 181 P62910;F8W727;D3YTB1;D3YTI8 RPL32 60S ribosomal protein L32 yes no 0 0 0 0 2 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 1 32.807 33.626 3 0.033532 3448 Miao_Sh-c_Flag_mass3_141226_01 74.165 67.497 4932.8 240.62 245.22 0 0 0 2163.8 173.99 260.75 0 1848.4 0 0 27 181 27 203;204;205;206;207;208 216 216 1 AALSALESFLK Unmodified 1148.6441 0.64412484 533 P78527;E7EUY0;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 1 1 98.259 96.554 2 0.004247 22210 Miao_Sh-H9_Flag_mass3_141226_02 87.184 67.526 10285 0 680.25 2164.5 934.9 0 0 1743.7 2502.8 0 2258.9 0 0 28 533 28 209;210;211;212;213;214 217;218;219;220 219 4 AALSASEGEEVPQDK Unmodified 1529.7209 0.72093119 307 O95831;O95831-3;O95831-6;O95831-4 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 42.638 43.59 2 0.056014 10164 Miao_Sh-H9_proteinG_mass3_141226_01 38.376 24.141 0 0 0 0 0 0 0 0 0 0 0 0 0 29 307 29 215 221 221 1 AALVLEDGSVLR Acetyl (Protein N-term) 1283.7085 0.70851601 174 P27708;F8VPD4 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 1 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 96.909 96.708 2 0.0064347 22578 Miao_Sh-H9_Flag_mass3_141226_02 57.175 30.643 0 0 0 0 0 0 0 0 0 0 0 0 0 30 174 30 216 222 222 1 AAPGAEFAPNK Unmodified 1071.5349 0.53490874 578 Q15233;Q15233-2 NONO Non-POU domain-containing octamer-binding protein yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 2 1 1 1 2 38.64 41.086 2 0.0015583 8924 Miao_Sh-H9_proteinG_mass3_141226_02 110.84 52.979 15559 78.6 41.612 0 0 492.41 2593.8 373.25 0 0 2615.8 2984.5 6379 31 578 31 217;218;219;220;221;222;223;224;225;226 223;224 224 2 AAQAPSSFQLLYDLK Unmodified 1650.8617 0.86172219 358 P11586;F5H2F4 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 88.793 88.859 2 0.0052335 19418 Miao_Sh-H9_Flag_mass3_141226_01 59.673 47.404 3858.7 0 0 374.99 0 0 0 1254.9 0 2228.9 0 0 0 32 358 32 227;228;229 225 225 1 AAQGEPQVQFK Acetyl (Protein N-term) 1243.6197 0.619701 58 P62826;B5MDF5 RAN GTP-binding nuclear protein Ran yes no 1 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 51.921 55.254 2 2.2827E-17 14031 Miao_Sh-H9_proteinG_mass3_141226_02 149.33 124.21 8398.5 0 0 0 0 773.79 2848 0 0 1730.5 0 0 3046.2 33 58 33 230;231;232;233;234 226;227 227 1 AAQLAIR Unmodified 741.44972 0.44972255 181 P62910;F8W727;D3YTB1 RPL32 60S ribosomal protein L32 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 2 1 1 39.652 39.852 2 0.0007391 3948 Miao_Sh-c_Flag_mass3_141226_01 139.92 36.631 2496.8 1048.6 210.94 242.38 0 0 0 994.87 0 0 0 0 0 34 181 34 235;236;237;238;239 228;229 228 2 AASAAAASAAAASAASGSPGPGEGSAGGEK Acetyl (Protein N-term) 2428.1102 0.11023833 560 Q13263;Q13263-2 TRIM28 Transcription intermediary factor 1-beta yes no 1 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 2 1 63.58 64.766 3 1.069E-32 11569 Miao_Sh-H9_Flag_mass3_141226_02 95.713 84.641 4157.2 0 0 0 0 420.04 0 3562.2 0 174.87 0 0 0 35 560 35 240;241;242;243;244 230;231;232 231 2 AAVENLPTFLVELSR Unmodified 1657.9039 0.90392136 574 Q14974;J3QR48 KPNB1 Importin subunit beta-1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 2 1 1 1 111.76 103.9 2;3 0.00082604 25659 Miao_Sh-H9_Flag_mass3_141226_02 69.485 51.939 4205.2 0 0 0 0 0 1731.7 1250 0 0 0 1223.6 0 36 574 36 245;246;247;248;249;250 233;234;235;236 235 4 AAVESLGFILFR Unmodified 1321.7394 0.73942221 637 Q99460;Q99460-2;H7C378 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 101.02 101.37 2 0.022729 22025 Miao_Sh-c_Flag_mass3_141226_02 56.205 40.264 1973.3 0 1973.3 0 0 0 0 0 0 0 0 0 0 37 637 37 251 237 237 1 AAVEWFDGK Unmodified 1021.4869 0.48689592 13 Q01844;H7BY36;C9JGE3;B0QYK0;Q01844-2;Q01844-6;Q01844-3;Q01844-5 EWSR1 RNA-binding protein EWS yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 2 1 2 2 1 3 2 1 61.599 62.305 2 9.8653E-15 17116 Miao_Sh-H9_proteinG_mass3_141226_02 162.88 31.373 31903 0 0 0 0 4285.6 7512.9 1266.8 4789 1246.1 0 7109.9 5692.4 38 13 38 252;253;254;255;256;257;258;259;260;261;262;263;264;265;266 238;239;240;241;242;243;244;245;246;247;248;249;250;251;252 249 15 AAVPSGASTGIYEALELR Unmodified 1803.9367 0.93667805 333 P06733;K7EM90;P13929;P09104;F5H0C8;P13929-3;B7Z2X9;P13929-2;F5H1C3;E5RI09;E5RG95;K7EPM1;K7EKN2;E5RGZ4 ENO1;ENO3;ENO2 Alpha-enolase;Enolase;Beta-enolase;Gamma-enolase yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 4 7 2 2 1 7 4 3 5 3 12 89.332 86.804 2;3 4.308E-36 17948 Miao_Sh-H9_Flag_mass3_141226_01 161.91 108.67 268340 18715 16154 1077.9 28833 16079 15051 30641 24850 25559 30353 48795 12236 39 333 39 267;268;269;270;271;272;273;274;275;276;277;278;279;280;281;282;283;284;285;286;287;288;289;290;291;292;293;294;295;296;297;298;299;300;301;302;303;304;305;306;307;308;309;310;311;312;313;314;315;316;317;318 253;254;255;256;257;258;259;260;261;262;263;264;265;266;267;268;269;270;271;272;273;274;275;276;277;278;279;280;281;282;283;284;285;286;287;288;289;290;291;292;293;294;295;296;297;298;299;300;301;302;303;304;305;306;307;308;309;310;311;312;313;314;315;316;317;318;319;320;321;322;323;324;325;326;327;328;329;330;331;332;333;334;335;336;337;338;339;340;341;342;343;344;345;346;347;348;349;350;351;352;353;354;355;356;357;358;359;360;361;362;363;364;365;366;367;368;369;370;371;372;373;374;375 310 123 AAVQAAEVK Acetyl (Protein N-term) 927.50255 0.50254598 575 Q15046;H3BRC9 KARS Lysine--tRNA ligase yes no 1 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 39.76 43.118 2 0.054097 9857 Miao_Sh-H9_proteinG_mass3_141226_03 40.331 15.332 3171.9 0 0 0 0 0 1345 0 0 0 404.78 0 1422.1 40 575 40 319;320;321 376 376 1 AAYFGIYDTAK Unmodified 1218.5921 0.59208927 322 P05141 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 2 1 1 3 1 3 65.912 66.995 2 0.0019982 17379 Miao_Sh-c_proteinG_mass3_141226_03 97.452 74.874 42884 2823.8 2008.2 1693.4 0 1597.2 6005.1 9760.8 0 4757.4 6789.5 224.33 7224.4 41 322 41 322;323;324;325;326;327;328;329;330;331;332;333;334;335;336 377;378;379;380;381;382;383;384;385 381 9 ADDPSAADRNVEIWK Acetyl (Protein N-term) 1727.8115 0.81147753 510 P62495;D6RCB3 ETF1 Eukaryotic peptide chain release factor subunit 1 yes no 1 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 63.739 65.381 2 0.00061688 18448 Miao_Sh-H9_proteinG_mass3_141226_01 71.545 50.768 11894 0 0 0 2280.3 0 0 0 0 0 5062.7 1836.3 2715.1 42 510 42 337;338;339;340 386 386 1 ADEGISFR Unmodified 893.4243 0.42429566 545 Q06830 PRDX1 Peroxiredoxin-1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 44.052 47.01 2 0.015235 10732 Miao_Sh-H9_proteinG_mass3_141226_03 82.426 50.284 0 0 0 0 0 0 0 0 0 0 0 0 0 43 545 43 341 387 387 1 ADFCIIHYAGK Unmodified 1293.6176 0.61759251 433;434 P35579;P35579-2;P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH9;MYH10 Myosin-9;Myosin-10 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 1 60.724 61.777 3 0.01319 10381 Miao_Sh-H9_Flag_mass3_141226_03 55.314 23.717 5895.5 462.95 587.54 0 1517.9 1149.7 0 0 761.35 865.7 0 0 550.43 44 433;434 44 342;343;344;345;346;347;348 388;389 389 2 ADGQVAELLLR Acetyl (Protein N-term) 1225.6667 0.6666512 56 Q9Y285;B4E363;K7EK06;K7ER16 FARSA Phenylalanine--tRNA ligase alpha subunit yes no 1 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 1 1 1 95.464 88.622 2 0.0036111 21312 Miao_Sh-H9_Flag_mass3_141226_01 73.877 54.621 10279 0 0 362.68 1129.3 0 2117.3 1942.7 0 0 3044.2 0 1682.6 45 56 45 349;350;351;352;353;354 390;391;392;393 392 4 ADGSTITR Unmodified 819.40865 0.4086456 111 CON__Q1RMN8 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 26.647 27.198 2 0.022621 5669 Miao_Sh-H9_proteinG_mass3_141226_01 66.299 35.687 0 0 0 0 0 0 0 0 0 0 0 0 0 + 46 111 46 355 394 394 1 ADGYEPPVQESV Unmodified 1289.5776 0.57756142 492 P61247;D6RAT0;H0Y9Y4;D6R9B6 RPS3A 40S ribosomal protein S3a yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 1 2 3 2 3 2 2 56.862 57.995 2 1.4508E-11 15474 Miao_Sh-H9_proteinG_mass3_141226_01 140.63 128.58 37630 2536.9 1214.2 1314.6 1374.6 0 7060 2951.2 1829.9 4618.4 1249.7 2567.1 10913 47 492 47 356;357;358;359;360;361;362;363;364;365;366;367;368;369;370;371;372;373;374;375;376 395;396;397;398;399;400;401;402;403;404;405;406;407;408;409 405 15 ADGYVLEGK Unmodified 950.47091 0.4709115 499 P62241;Q5JR95 RPS8 40S ribosomal protein S8 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 1 40.041 42.122 2 0.0024775 9796 Miao_Sh-H9_proteinG_mass3_141226_01 110.53 76.445 10005 0 0 274.76 0 459.99 2121.2 274.76 0 23.735 2490.2 2399.4 1961.2 48 499 48 377;378;379;380;381;382;383;384 410;411;412;413;414 413 5 ADIQTER Acetyl (Protein N-term) 873.41921 0.41921028 254 P62280;M0QZC5;M0R1H6 RPS11 40S ribosomal protein S11 yes no 1 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 1 1 1 1 37.196 38.549 2 0.001551 3566 Miao_Sh-c_Flag_mass3_141226_03 120.46 80.794 3600.8 326.11 264.97 291.87 268.8 296.56 892.12 250.15 0 131.39 878.84 0 0 49 254 49 385;386;387;388;389;390;391;392;393;394 415;416;417;418;419;420;421 417 7 ADLEMQIESLTEELAYLK Unmodified 2095.0395 0.039488138 104 P13645;CON__P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 115.28 115.35 3 2.5332E-07 30253 Miao_Sh-H9_Flag_mass3_141226_03 84.653 75.856 7514.9 1707.2 828.7 0 0 0 0 1826.2 449.68 2703.1 0 0 0 + 50 104 50 395;396;397;398;399 422;423;424;425 425 4 ADLEMQIESLTEELAYLK Oxidation (M) 2111.0344 0.03440276 104 P13645;CON__P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 1 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 3 3 1 1 4 1 2 116.78 116.42 2;3 2.0223E-14 28874 Miao_Sh-H9_Flag_mass3_141226_01 100.45 82.435 45367 0 7102.7 2159.6 8818.9 354.93 24.09 9759.3 8780.3 8367.3 0 0 0 + 51 104 50 400;401;402;403;404;405;406;407;408;409;410;411;412;413;414;415;416 426;427;428;429;430;431;432;433;434;435;436;437 435 12 12 ADLINNLGTIAK Unmodified 1241.698 0.69795133 344;341;590 P07900;P07900-2;Q14568;Q58FF8;P08238 HSP90AA1;HSP90AA2;HSP90AB2P;HSP90AB1 Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A2;Putative heat shock protein HSP 90-beta 2;Heat shock protein HSP 90-beta no no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 1 1 1 69.009 70.276 2;3 2.5284E-17 13321 Miao_Sh-H9_Flag_mass3_141226_01 145.06 78.558 147000 9945.3 0 0 10481 0 18192 0 36571 40718 16604 0 14486 52 341;590;344 51 417;418;419;420;421;422;423;424;425;426 438;439;440;441;442;443;444;445 441 8 ADLTALFLPR Unmodified 1115.6339 0.63389451 556 Q13045;Q13045-2;Q13045-3 FLII Protein flightless-1 homolog yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 112.07 101.47 2 0.0090661 36665 Miao_Sh-H9_proteinG_mass3_141226_02 74.841 53.541 0 0 0 0 0 0 0 0 0 0 0 0 0 53 556 52 427;428 446;447 447 2 ADQLTEEQIAEFK Acetyl (Protein N-term) 1562.7464 0.74641766 202 P62158;H0Y7A7;F8WBR5;M0QZ52;G3V479 CALM1;CALM2;CALM3 Calmodulin yes no 1 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 4 1 1 1 75.739 73.471 2 3.8367E-146 24514 Miao_Sh-H9_proteinG_mass3_141226_01 241.42 196.91 91521 9654.4 1779.4 0 22712 422.23 1557.9 1756.9 9060.5 971.15 18452 11903 13252 54 202 53 429;430;431;432;433;434;435;436;437;438;439;440;441;442 448;449;450;451;452;453;454;455;456;457;458;459 455 12 ADTLDPALLRPGR Unmodified 1393.7678 0.76776222 453 P43686;P43686-2 PSMC4 26S protease regulatory subunit 6B yes no 0 0 0 0 1 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 59.256 59.398 3 1.0321E-11 9307 Miao_Sh-H9_Flag_mass3_141226_01 99.589 75.335 21968 2279.1 1931.9 1832.7 0 0 0 5018.6 5610.8 5294.8 0 0 0 55 453 54 443;444;445;446;447;448 460;461;462;463;464;465;466 462 6 ADTLTDEINFLR Unmodified 1406.7042 0.70415892 98 P02538;CON__P02538;P48668;CON__P04259;CON__P48668 KRT6A;KRT6C Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C no no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 1 3 93.863 90.941 2;3 1.6751E-83 32365 Miao_Sh-H9_proteinG_mass3_141226_01 212.27 158.01 36169 0 1076.2 0 9555.6 7808 5950.5 469.83 949.52 0 10360 0 0 + 56 98 55 449;450;451;452;453;454;455;456;457 467;468;469;470;471;472;473;474;475;476;477 475 11 ADVQSIIGLQR Unmodified 1198.667 0.66698555 560 Q13263;Q13263-2;M0R0K9 TRIM28 Transcription intermediary factor 1-beta yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 66.706 66.439 2 0.0044618 18899 Miao_Sh-H9_proteinG_mass3_141226_01 96.067 52.11 0 0 0 0 0 0 0 0 0 0 0 0 0 57 560 56 458;459;460 478;479;480 480 3 AEAESLYQSK Unmodified 1124.535 0.53496832 314 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 2 1 1 2 1 2 1 37.708 39.019 2 3.1378E-56 8383 Miao_Sh-H9_proteinG_mass3_141226_01 207.67 157.37 38730 311.78 0 285.79 1088.3 1224.2 10754 338.64 483.44 355.16 13406 10483 0 + 58 314 57 461;462;463;464;465;466;467;468;469;470;471;472;473;474 481;482;483;484;485;486;487;488;489;490;491;492;493;494 491 14 AEAESWYQTK Unmodified 1211.5459 0.54586736 98 P02538;CON__P02538;P48668;CON__P04259;CON__P48668;O95678;CON__O95678;CON__Q8VED5 KRT6A;KRT6C;KRT75 Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 75 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 2 1 1 1 45.034 47.39 2 9.2343E-11 11566 Miao_Sh-H9_proteinG_mass3_141226_01 136.94 93.171 4947.5 0 188.53 258.15 0 355.59 1053.2 200.46 0 0 0 2891.6 0 + 59 98 58 475;476;477;478;479;480;481;482 495;496;497;498 496 4 AEAGAGSATEFQFR Unmodified 1440.6634 0.66335673 460 P46783;Q9NQ39 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 1 2 3 1 3 1 3 58.922 59.508 2;3 1.4657E-62 14303 Miao_Sh-c_proteinG_mass3_141226_03 189.23 148.46 29678 271.27 365.65 1119.7 0 2835 0 4551.7 0 4531.6 878.14 1510.6 13615 60 460 59 483;484;485;486;487;488;489;490;491;492;493;494;495;496;497;498;499;500;501 499;500;501;502;503;504;505;506;507;508;509 499 11 AEAGDNLGALVR Unmodified 1184.6149 0.61494998 465 P49411 TUFM Elongation factor Tu, mitochondrial yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 2 1 1 2 2 57.776 58.65 2 0.00068756 9006 Miao_Sh-H9_Flag_mass3_141226_03 78.548 44.673 12386 0 0 0 0 0 0 1377 573.95 1664.2 5739.6 0 3030.8 61 465 60 502;503;504;505;506;507;508;509 510;511;512;513;514 511 4 AEDNADTLALVFEAPNQEK Unmodified 2073.9855 0.98547873 360 P12004 PCNA Proliferating cell nuclear antigen yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 84.779 84.127 2 0.012618 17706 Miao_Sh-H9_Flag_mass3_141226_01 43.476 34.483 0 0 0 0 0 0 0 0 0 0 0 0 0 62 360 61 510 515 515 1 AEEQPQVELFVK Acetyl (Protein N-term) 1457.7402 0.74021007 263 O00299 CLIC1 Chloride intracellular channel protein 1 yes yes 1 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 2 1 1 2 1 2 1 78.218 73.785 2 0.00013647 25162 Miao_Sh-H9_proteinG_mass3_141226_02 119.25 84.075 23996 0 0 3899.8 4713.3 0 0 0 0 0 6198 4902.6 4282.7 63 263 62 511;512;513;514;515;516;517;518;519;520;521;522 516;517;518;519;520;521;522;523;524;525;526;527;528;529;530 526 14 AEFVEVTK Unmodified 921.48075 0.48074791 99 CON__P02769 yes yes 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 2 1 1 1 1 1 43.233 45.764 2 0.01209 10769 Miao_Sh-H9_proteinG_mass3_141226_01 88.177 43.096 11165 838.44 809.67 0 0 233.73 3384.2 637.45 0 0 2754 2507.1 0 + 64 99 63 523;524;525;526;527;528;529;530;531;532 531;532;533;534;535 533 5 AEGDVAALNR Unmodified 1014.5094 0.50942227 526 P67936 TPM4 Tropomyosin alpha-4 chain yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 37.46 37.886 2 0.033202 8443 Miao_Sh-H9_proteinG_mass3_141226_01 60.102 39.477 1032.8 45.548 0 0 0 0 0 0 0 0 987.25 0 0 65 526 64 533;534 536 536 1 AEGILLLVK Unmodified 954.61137 0.61136815 664 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching 2 1 3 2 4 1 85.533 77.882 2 0.0035528 34485 Miao_Sh-H9_proteinG_mass3_141226_02 91.087 55.649 20261 0 0 0 4180.8 2926.6 5941 0 0 0 5465.9 1092.9 653.27 66 664 65 535;536;537;538;539;540;541;542;543;544;545;546;547 537;538;539;540;541;542;543;544 544 8 AEGPEVDVNLPK Unmodified 1266.6456 0.6455814 550 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 56.733 57.886 2 0.0046603 14586 Miao_Sh-H9_proteinG_mass3_141226_03 67.519 44.2 0 0 0 0 0 0 0 0 0 0 0 0 0 67 550 66 548;549;550 545;546;547 547 3 AELATEEFLPVTPILEGFVILR Unmodified 2456.3567 0.3566636 559 Q13200;E9PCS3;E7EW34 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 4 3 1 1 1 2 119.8 120.6 2;3 4.4942E-28 31575 Miao_Sh-H9_Flag_mass3_141226_02 139.2 131.09 114910 40312 17389 0 0 515.59 0 15334 21202 20158 0 0 0 68 559 67 551;552;553;554;555;556;557;558;559;560;561;562;563;564 548;549;550;551;552;553;554;555;556;557;558;559;560;561;562 561 15 AELGAGAPPAVVAR Unmodified 1277.7092 0.70918471 588 Q3KQU3;Q3KQU3-2;Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 48.403 51.46 2 0.0025595 12022 Miao_Sh-H9_proteinG_mass3_141226_03 65.809 45.602 0 0 0 0 0 0 0 0 0 0 0 0 0 69 588 68 565 563 563 1 AELNEFLTR Unmodified 1091.5611 0.56112349 402 P23396;F2Z2S8;H0YCJ7;E9PPU1;E9PL09;P23396-2;H0YF32;E9PQ96;E9PJH4;E9PK82;H0YEU2;E9PQX2;H0YES8 RPS3 40S ribosomal protein S3 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 3 1 1 1 3 3 2 1 1 3 3 66.361 66.019 2 2.12E-21 17596 Miao_Sh-H9_proteinG_mass3_141226_03 175.65 89.51 65802 5112.7 1665 1812.2 3765.3 0 1317.2 11277 8350.3 6621.8 9308.5 7629.3 8943.2 70 402 69 566;567;568;569;570;571;572;573;574;575;576;577;578;579;580;581;582;583;584;585;586;587;588;589 564;565;566;567;568;569;570;571;572;573;574;575;576;577;578;579;580;581;582;583 581 20 AENFFILR Unmodified 1008.5393 0.53926584 185 P59998;F8WCF6;F8WDD7;P59998-3;P59998-2;R4GN08;P59998-4 ARPC4;ARPC4-TTLL3 Actin-related protein 2/3 complex subunit 4 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 1 1 1 81.12 76.558 2 0.0086379 15746 Miao_Sh-c_proteinG_mass3_141226_01 93.429 67.323 10463 0 1315.2 977 2305.3 0 1106.9 0 0 2267.9 266.46 1643.1 580.74 71 185 70 590;591;592;593;594;595;596;597;598 584;585;586;587 585 4 AEPAVPQAPQK Unmodified 1134.6033 0.60332266 370 P14649;F8W1I5 MYL6B Myosin light chain 6B yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 3 2 1 1 36.363 38.268 2 0.0032974 7367 Miao_Sh-c_proteinG_mass3_141226_03 77.288 58.848 12913 127.74 0 122.61 0 0 3521.5 0 0 0 3485.4 3186 2469.5 72 370 71 599;600;601;602;603;604;605;606;607 588;589;590;591;592;593;594;595;596;597;598 590 11 AEQDITTLEQSISR Unmodified 1589.7897 0.78967946 10 Q9Y608;Q9Y608-2;A8MXR0;Q9Y608-4;Q9Y608-3 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 4 1 1 1 2 2 1 1 5 2 4 68.542 70.59 2;3 1.8415E-06 20361 Miao_Sh-H9_proteinG_mass3_141226_01 116.86 96.755 41177 1458.3 0 0 0 5849.1 8786 3001.7 3603.7 0 4891.6 6476.3 7110.3 73 10 72 608;609;610;611;612;613;614;615;616;617;618;619;620;621;622;623;624;625;626;627;628;629;630;631 599;600;601;602;603;604;605;606;607;608;609;610;611;612;613;614;615;616;617;618;619;620;621;622;623;624;625;626;627 611 29 AESEQEAYLR Unmodified 1194.5517 0.55168102 651 Q9NR28;Q9NR28-2;Q9NR28-3 DIABLO Diablo homolog, mitochondrial yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 40.439 41.479 2 2.1935E-10 4177 Miao_Sh-c_Flag_mass3_141226_02 149.33 77.102 1354.4 138.42 399.41 0 0 69.208 0 0 0 747.37 0 0 0 74 651 73 632;633;634;635 628;629;630 629 3 AESEQEAYLRED Unmodified 1438.6212 0.62121715 651 Q9NR28;Q9NR28-2;Q9NR28-3 DIABLO Diablo homolog, mitochondrial yes no 0 0 0 0 1 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 46.195 46.07 2 3.8029E-09 5015 Miao_Sh-c_Flag_mass3_141226_01 141.88 117.81 1303.2 632.96 0 0 0 0 0 0 0 670.2 0 0 0 75 651 74 636;637 631 631 1 AESIIIR Acetyl (Protein N-term) 842.48617 0.48616764 613 Q8TAT6;Q8TAT6-2;I3L4U9 NPLOC4 Nuclear protein localization protein 4 homolog yes no 1 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 68.337 67.334 2 0.032891 12475 Miao_Sh-H9_Flag_mass3_141226_02 60.682 37.791 0 0 0 0 0 0 0 0 0 0 0 0 0 76 613 75 638 632 632 1 AETECQNTEYQQLLDIK Unmodified 2081.9575 0.95754942 104 P13645;CON__P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 4 2 3 1 2 1 12 4 11 81.567 75.214 2;3 2.5543E-60 15172 Miao_Sh-c_proteinG_mass3_141226_02 180.32 162.56 69724 0 0 0 907.39 10899 10461 6952.4 293.9 0 8696.1 14487 17027 + 77 104 76 639;640;641;642;643;644;645;646;647;648;649;650;651;652;653;654;655;656;657;658;659;660;661;662;663;664;665;666;667;668;669;670;671;672;673;674;675;676;677;678;679 633;634;635;636;637;638;639;640;641;642;643;644;645;646;647;648;649;650;651;652;653;654;655;656;657;658;659;660;661;662;663;664;665;666;667;668;669;670;671;672;673;674;675;676 639 43 AETLASSLQEDLAHTR Unmodified 1740.8642 0.86424139 184 Q69YQ0;F8WAN1;Q69YQ0-2;C9J8U1 SPECC1L;SPECC1L-ADORA2A Cytospin-A yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 2 1 2 1 2 2 1 74.546 73.01 3 1.74E-05 21758 Miao_Sh-H9_proteinG_mass3_141226_01 87.138 55.464 14261 0 2477.3 1712.3 0 0 2247.6 1253.3 2848.2 0 3406.7 315.51 0 78 184 77 680;681;682;683;684;685;686;687;688;689;690 677;678 678 2 AEVQVLVLDGR Acetyl (Protein N-term) 1239.6823 0.68230126 445 P40429;M0QZU1 RPL13A 60S ribosomal protein L13a yes no 1 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 1 6 2 4 1 1 2 3 90.719 83.945 2 3.2251E-15 28182 Miao_Sh-H9_proteinG_mass3_141226_01 152.38 131.01 49144 3512.9 2416.7 2789.2 6661.2 988.47 645.7 0 0 3496 9188.5 10125 9321.1 79 445 78 691;692;693;694;695;696;697;698;699;700;701;702;703;704;705;706;707;708;709;710;711;712;713;714;715;716 679;680;681;682;683;684;685;686;687;688;689;690;691;692;693;694;695;696;697;698;699;700;701;702;703;704;705;706;707;708 700 29 AEYLASIFGTEK Acetyl (Protein N-term) 1369.6765 0.67654718 537 Q01081;Q01081-2;Q8WU68;K7EPL9;K7EJH3;K7EJM7;M0QYK5;M0R2N4;Q01081-3;Q8WU68-3;Q8WU68-2 U2AF1;U2AF1L4 Splicing factor U2AF 35 kDa subunit;Splicing factor U2AF 26 kDa subunit yes no 1 0 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 3 120.44 114.13 2 0.00026018 29533 Miao_Sh-c_proteinG_mass3_141226_02 113.24 76.815 2519.4 0 0 0 0 2494.7 0 0 0 0 0 0 24.7 80 537 79 717;718;719;720;721;722;723;724 709;710;711;712;713;714;715 711 7 AFAVGVQQVLLK Unmodified 1271.7602 0.76015765 302 O95373 IPO7 Importin-7 yes yes 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 1 1 2 2 74.481 72.556 2 1.7094E-07 16066 Miao_Sh-H9_Flag_mass3_141226_02 132.85 98.619 17702 0 0 310.11 4551.4 3227.1 3670.4 0 0 0 5943 0 0 81 302 80 725;726;727;728;729;730;731;732;733;734;735;736;737 716;717;718;719;720;721;722;723;724;725;726;727;728 723 13 AFAVVASALGIPSLLPFLK Unmodified 1913.139 0.13900667 294 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 117.9 118.15 3 2.7807E-06 29304 Miao_Sh-H9_Flag_mass3_141226_01 70.784 58.254 2754 1233 0 0 0 0 0 0 1521 0 0 0 0 82 294 81 738;739;740;741 729;730;731;732 730 4 AFDLFNPNFK Unmodified 1211.5975 0.597509 236 Q9Y3D9;J3QLR8 MRPS23 28S ribosomal protein S23, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 87.877 86.335 2 0.013049 18402 Miao_Sh-c_proteinG_mass3_141226_02 72.325 50.953 7480.1 1513.3 0 0 2754 1712.3 0 0 0 0 1500.5 0 0 83 236 82 742;743;744;745 733 733 1 AFDLYFVLDK Unmodified 1229.6332 0.6332258 486 P58335;P58335-4;P58335-3;P58335-2 ANTXR2 Anthrax toxin receptor 2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 97.336 97.086 2 0.049975 23014 Miao_Sh-H9_Flag_mass3_141226_03 49.448 36.44 0 0 0 0 0 0 0 0 0 0 0 0 0 84 486 83 746 734 734 1 AFFESHPAPSAER Unmodified 1444.6735 0.67352749 149 P55786;E9PLK3;B7Z463;H0YDG0 NPEPPS Puromycin-sensitive aminopeptidase yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 1 1 46.154 46.863 3 0.023194 4861 Miao_Sh-c_Flag_mass3_141226_02 44.829 30.594 6209.9 292.04 488.1 519.98 0 0 0 1051.5 0 932.16 2182.8 0 743.33 85 149 84 747;748;749;750;751;752;753 735 735 1 AFFSEVER Unmodified 983.47125 0.47124585 669 Q9UQ80;F8VR77 PA2G4 Proliferation-associated protein 2G4 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 3 62.959 61.63 2 0.0010874 9200 Miao_Sh-H9_Flag_mass3_141226_03 109.48 67.904 4285.1 0 0 0 0 331.36 0 2463.5 0 0 405.04 0 1085.2 86 669 85 754;755;756;757;758;759;760;761;762 736;737;738;739;740;741 739 6 AFGFSHLEALLDDSK Unmodified 1648.8097 0.80968662 163 Q96FW1;F5GYN4;F5H6Q1;F5GYJ8;J3KR44 OTUB1 Ubiquitin thioesterase OTUB1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 111.23 100.63 3 0.0029187 37275 Miao_Sh-H9_proteinG_mass3_141226_01 56.514 38.378 2909.7 0 0 0 0 0 0 0 0 0 2316.8 592.88 0 87 163 86 763;764 742 742 1 AFGYYGPLR Unmodified 1042.5236 0.52361577 53 P84103;B4E241 SRSF3 Serine/arginine-rich splicing factor 3 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 1 2 76.609 70.82 2 9.4557E-06 10259 Miao_Sh-c_Flag_mass3_141226_01 120.46 99.937 16435 0 1455.5 1582.1 0 2759.1 2236.6 0 0 2840 2865.9 785.82 1910.3 88 53 87 765;766;767;768;769;770;771;772;773;774 743;744;745;746;747;748;749;750;751;752;753;754 743 12 AFHNEAQVNPER Unmodified 1410.664 0.66402543 386 P17987;F5H282;E7EQR6 TCP1 T-complex protein 1 subunit alpha yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 1 1 1 1 33.333 34.594 2;3 0.0013942 6060 Miao_Sh-c_proteinG_mass3_141226_03 78.705 63.327 2233.5 196.22 39.346 0 105.21 0 1538.1 271.77 0 0 0 0 82.853 89 386 88 775;776;777;778;779;780;781;782 755;756;757;758 755 4 AFITNIPFDVK Unmodified 1263.6863 0.68632401 471 P52272;P52272-2;M0R019;M0R2T0;M0QYQ7;M0R0Y6;M0R0N3 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 2 1 1 1 2 2 1 90.297 86.813 2 1.4938E-06 18373 Miao_Sh-c_proteinG_mass3_141226_01 125.46 81.688 28791 3108 0 2447 0 5466.9 0 0 4043.5 4104.9 5136.2 4484.5 0 90 471 89 783;784;785;786;787;788;789;790;791;792;793;794 759;760;761;762;763;764;765;766;767;768;769;770;771;772 763 14 AFLADPSAFVAAAPVAAATTAAPAAAAAPAK Unmodified 2751.4596 0.45956554 326 P05388;F8VWS0;Q3B7A4;F8W1K8 RPLP0 60S acidic ribosomal protein P0 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 2 2 99.75 91.54 3 2.526E-08 32339 Miao_Sh-H9_proteinG_mass3_141226_01 55.406 45.26 0 0 0 0 0 0 0 0 0 0 0 0 0 91 326 90 795;796;797;798;799 773;774;775;776;777 775 5 AFLIEEQK Unmodified 976.52295 0.52294707 463 P49207 RPL34 60S ribosomal protein L34 yes yes 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 4 1 1 3 3 3 6 3 55.53 56.624 2 8.9063E-27 12866 Miao_Sh-H9_proteinG_mass3_141226_03 186.3 133.51 88255 2593.4 2628.1 89.957 4183.3 4460.3 18136 5271.2 7750.5 4111.8 4253.1 20197 14581 92 463 91 800;801;802;803;804;805;806;807;808;809;810;811;812;813;814;815;816;817;818;819;820;821;822;823;824;825;826;827;828;829 778;779;780;781;782;783;784;785;786;787;788;789;790;791;792;793;794;795;796;797;798;799;800;801;802 799 25 AFLLSLAALR Unmodified 1073.6597 0.65971533 608 Q8IV08;M0QZI4 PLD3 Phospholipase D3 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 2 1 2 2 99.278 95.762 2 3.0589E-25 21406 Miao_Sh-H9_Flag_mass3_141226_01 174.42 134.09 10535 0 1649.4 1922.2 0 0 0 2755.6 3081.6 0 1126.1 0 0 93 608 92 830;831;832;833;834;835;836;837;838;839 803;804;805;806;807;808;809;810;811;812 808 10 AFLTLAEDILR Unmodified 1260.7078 0.70778773 490 P61026 RAB10 Ras-related protein Rab-10 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 101.45 102.91 2 0.019819 25238 Miao_Sh-c_proteinG_mass3_141226_01 59.198 29.455 0 0 0 0 0 0 0 0 0 0 0 0 0 94 490 93 840 813 813 1 AFNDPFIQK Unmodified 1078.5447 0.54474515 625 Q92598;Q92598-2;Q92598-3;Q92598-4;R4GN69 HSPH1 Heat shock protein 105 kDa yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 64.515 64.883 2 0.016643 11385 Miao_Sh-H9_Flag_mass3_141226_01 72.243 28.801 10051 551.17 0 971.55 0 0 0 2022.6 2153.3 2783.1 0 1569.2 0 95 625 94 841;842;843;844;845;846 814;815 814 2 AFSAVDTDGNGTINAQELGAALK Unmodified 2262.1128 0.11280451 660 Q9NZT1 CALML5 Calmodulin-like protein 5 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching 1 2 1 2 82.689 81.202 3 1.2378E-33 16862 Miao_Sh-c_proteinG_mass3_141226_01 131.82 121.68 25228 0 0 0 10659 8557.3 0 2819.7 0 0 0 3191.2 0 96 660 95 847;848;849;850;851;852 816;817;818 816 3 AFSVFLFNTENK Unmodified 1415.7085 0.70851601 567 Q13907;Q13907-2;C9JD53;C9JKM8 IDI1 Isopentenyl-diphosphate Delta-isomerase 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 90.612 90.135 2 0.0030476 19398 Miao_Sh-H9_Flag_mass3_141226_01 71.806 50.411 0 0 0 0 0 0 0 0 0 0 0 0 0 97 567 96 853;854 819;820 819 2 AFVAIGDYNGHVGLGVK Unmodified 1715.8995 0.89950468 375 P15880;H0YEN5;E9PMM9;I3L404;E9PPT0;E9PM36 RPS2 40S ribosomal protein S2 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 3 2 4 102.18 91.796 2;3 1.7927E-17 31451 Miao_Sh-H9_proteinG_mass3_141226_01 132.08 100.48 19045 0 0 1757.2 0 0 4653.1 0 0 0 6548.1 0 6086.3 98 375 97 855;856;857;858;859;860;861;862;863;864;865;866;867 821;822;823;824;825;826;827;828;829;830;831;832;833;834;835;836;837;838;839 830 19 AFVDFLSDEIK Unmodified 1282.6445 0.64451877 546 Q07021 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial yes yes 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 2 1 1 1 2 2 2 1 91.13 90.841 2 0.0014037 19703 Miao_Sh-H9_Flag_mass3_141226_01 108.35 68.726 14538 1762.6 2546 1397.9 319.47 2287.7 0 3656.2 2123.7 0 0 444.33 0 99 546 98 868;869;870;871;872;873;874;875;876;877;878;879;880 840;841;842;843;844;845;846;847;848 844 9 AGAGPAPGLPGAGGPVVPGPGAGIPGK Acetyl (Protein N-term) 2217.1906 0.19060132 249 Q9BTD8;K7ER08;K7EQ03;K7EP90;Q9BTD8-4;Q9BTD8-2;Q9BTD8-3;K7EML2 RBM42 RNA-binding protein 42 yes no 1 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 65.938 66.201 3 2.6261E-06 22894 Miao_Sh-H9_proteinG_mass3_141226_02 53.998 48.329 7551.7 0 0 181.02 0 5292.8 1803.8 0 0 274.02 0 0 0 100 249 99 881;882;883;884;885 849;850 850 2 AGALNSNDAFVLK Unmodified 1318.6881 0.68811492 329 P06396;P06396-2;P06396-4;P06396-3;Q5T0H9;CON__Q3SX14;Q5T0H7;Q5T0H8 GSN Gelsolin yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 62.794 63.646 2 0.00046746 17632 Miao_Sh-H9_proteinG_mass3_141226_01 82.202 39.866 7239.1 0 0 0 2128 0 0 0 0 0 5111.1 0 0 + 101 329 100 886;887 851;852 852 2 AGEARPGPTAESASGPSEDPSVNFLK Unmodified 2570.2249 0.22487416 563 Q13501;Q13501-2;E7EMC7;E9PFW8 SQSTM1 Sequestosome-1 yes no 0 0 0 0 1 By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 1 1 1 62.181 61.554 3 5.0737E-20 8834 Miao_Sh-c_Flag_mass3_141226_03 85.925 72.795 18670 0 0 0 0 0 0 5290.8 13379 0 0 0 0 102 563 101 888;889;890;891;892 853;854;855;856;857;858 853 5 AGELTEDEVER Unmodified 1246.5677 0.56772501 503 P62269 RPS18 40S ribosomal protein S18 yes yes 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 2 1 1 1 1 1 2 1 1 40.348 41.543 2 0.0054026 9244 Miao_Sh-H9_proteinG_mass3_141226_02 81.709 47.017 10243 269.39 325.86 0 49.666 305.04 3132.6 264.64 95.698 30.284 2774 2995.5 0 103 503 102 893;894;895;896;897;898;899;900;901;902;903;904;905;906 859;860;861;862;863;864 863 6 AGELTPEEEAQYK Acetyl (Protein N-term) 1505.6886 0.68856843 660 Q9NZT1 CALML5 Calmodulin-like protein 5 yes yes 1 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching 1 1 1 55.9 59.008 2 0.00014775 14353 Miao_Sh-c_proteinG_mass3_141226_03 80.96 57.842 0 0 0 0 0 0 0 0 0 0 0 0 0 104 660 103 907;908;909 865;866;867 866 3 AGELTPEEEAQYKK Acetyl (Protein N-term) 1633.7835 0.78353145 660 Q9NZT1 CALML5 Calmodulin-like protein 5 yes yes 1 0 0 0 1 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 2 1 1 1 50.692 53.111 2 9.7046E-06 11358 Miao_Sh-c_proteinG_mass3_141226_03 86.772 62.518 4594.8 0 0 0 0 0 565.99 0 0 175.65 1667.9 2185.2 0 105 660 104 910;911;912;913;914;915 868;869;870 869 3 AGFAGDDAPR Unmodified 975.44101 0.44100836 524;528 P63261;P60709;I3L3I0;I3L1U9;I3L4N8;Q6S8J3;A5A3E0;K7EM38;I3L3R2;J3KT65;P63267-2;P0CG38;G5E9R0;E7EVS6;C9JUM1;C9JZR7;P0CG39;C9JTX5;F8WCH0;P68133;P68032;Q5T8M8;A6NL76;P63267;P62736;Q5T8M7;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 ACTG1;ACTB;POTEE;POTEF;ACTG2;POTEI;POTEJ;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Actin, gamma-enteric smooth muscle;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle no no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 1 1 1 1 1 35.541 36.867 2 5.438E-69 3821 Miao_Sh-c_Flag_mass3_141226_01 209.73 148.05 189080 9842 7357.1 55.796 6075 5981.4 45434 9976 8490.5 9136.7 0 45881 40853 106 524;528 105 916;917;918;919;920;921;922;923;924;925;926 871;872;873;874;875;876;877;878;879;880;881;882;883;884;885;886;887;888 872 18 AGFYYIGPGDR Unmodified 1214.572 0.57202253 150;562 Q13490;E9PMH5;Q13490-2;H0YDY3;E9PQZ9;Q13489 BIRC2;BIRC3 Baculoviral IAP repeat-containing protein 2;Baculoviral IAP repeat-containing protein 3 no no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 2 1 2 2 63.098 62.879 2 0.0034061 11040 Miao_Sh-H9_Flag_mass3_141226_01 91.549 64.246 19990 2679.9 4438.9 0 0 0 0 3462.8 6354.7 3053.3 0 0 0 107 150;562 106 927;928;929;930;931;932;933;934 889;890;891 891 2 AGGDAEPRPAEPPAWAGGAR Unmodified 1931.9238 0.92382195 633 Q96HS1;Q96HS1-2 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 50.826 50.575 3 0.0096749 6565 Miao_Sh-H9_Flag_mass3_141226_01 44.577 33.319 0 0 0 0 0 0 0 0 0 0 0 0 0 108 633 107 935 892 892 1 AGGIETIANEFSDR Unmodified 1478.7001 0.70013617 625 Q92598;Q92598-2;Q92598-3;R4GN69 HSPH1 Heat shock protein 105 kDa yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 2 1 1 1 1 80.285 76.401 2 2.7005E-05 13709 Miao_Sh-c_Flag_mass3_141226_03 85.909 51.217 9985 0 2853 0 1523.1 0 0 0 0 4748.9 0 0 859.96 109 625 108 936;937;938;939;940;941;942 893;894;895;896;897 894 5 AGIISTVEVLK Unmodified 1128.6754 0.67542497 149 P55786;E9PLK3;B7Z463 NPEPPS Puromycin-sensitive aminopeptidase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 70.985 74.093 2 0.019819 20841 Miao_Sh-H9_proteinG_mass3_141226_02 59.198 31.117 0 0 0 0 0 0 0 0 0 0 0 0 0 110 149 109 943 898 898 1 AGIPVYAWK Unmodified 1003.5491 0.54910224 403 P23526;P23526-2 AHCY Adenosylhomocysteinase yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 64.55 68.109 2 0.031839 17800 Miao_Sh-c_proteinG_mass3_141226_03 62.546 35.292 0 0 0 0 0 0 0 0 0 0 0 0 0 111 403 110 944;945 899;900 900 2 AGITTIEAVK Acetyl (Protein N-term) 1043.5863 0.58627561 335 P06753-2;Q5VU59;P06753-5;P06753-3;P06753-4;P06753-6;D6R904;Q5VU61;D6RFM2 TPM3 Tropomyosin alpha-3 chain yes no 1 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1 1 1 1 66.913 68.267 2 8.5898E-10 18964 Miao_Sh-H9_proteinG_mass3_141226_02 141.29 88.568 106700 5185.9 3846.4 4375.1 7868.2 6312.9 11089 8794.3 7512.1 7688.6 16325 12614 15088 112 335 111 946;947;948;949;950;951;952;953;954;955;956;957 901;902;903;904;905;906;907;908;909;910;911;912;913;914;915;916;917;918;919;920;921;922;923;924;925 921 25 AGLNSLEAVK Acetyl (Protein N-term) 1042.5659 0.56587452 526 P67936 TPM4 Tropomyosin alpha-4 chain yes yes 1 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 62.29 68.055 2 0.0021716 17666 Miao_Sh-c_proteinG_mass3_141226_03 92.707 41.741 0 0 0 0 0 0 0 0 0 0 0 0 0 113 526 112 958 926 926 1 AGLQDASGNLVPLEDVHIK Unmodified 1975.0375 0.037454724 664 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 1 1 2 101.64 91.851 3 0.017378 33460 Miao_Sh-H9_proteinG_mass3_141226_03 38.377 31.97 5247.9 0 0 1575.6 0 0 2900.1 0 0 0 0 0 772.18 114 664 113 959;960;961;962 927;928 928 2 AGLQFPVGR Unmodified 943.52395 0.52395013 320;376;350 Q6FI13;P0C0S8;Q9BTM1;Q16777;Q99878;Q93077;Q7L7L0;P04908;Q96KK5;P20671;Q9BTM1-2;Q71UI9-5;P16104;Q96QV6;Q8IUE6;P0C0S5;Q71UI9;C9J0D1;Q71UI9-2 HIST2H2AA3;HIST1H2AG;H2AFJ;HIST2H2AC;HIST1H2AJ;HIST1H2AC;HIST3H2A;HIST1H2AB;HIST1H2AH;HIST1H2AD;H2AFV;H2AFX;HIST1H2AA;HIST2H2AB;H2AFZ Histone H2A type 2-A;Histone H2A type 1;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-J;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A type 1-H;Histone H2A type 1-D;Histone H2A.V;Histone H2AX;Histone H2A type 1-A;Histone H2A type 2-B;Histone H2A.Z;Histone H2A no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 2 1 2 2 2 6 61.802 62.331 2 3.6277E-15 14787 Miao_Sh-c_proteinG_mass3_141226_03 167.23 92.974 959010 18195 18623 17583 24805 21602 153070 51652 50833 57430 151110 187600 206520 115 320;376;350 114 963;964;965;966;967;968;969;970;971;972;973;974;975;976;977;978;979;980;981;982;983 929;930;931;932;933;934;935;936;937;938;939;940;941;942;943;944;945;946;947;948;949;950;951;952;953;954;955;956;957;958 939 30 AGLYGLPR Unmodified 845.47594 0.4759373 464 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 54.616 57.009 2 0.0094828 14417 Miao_Sh-H9_proteinG_mass3_141226_02 91.626 43.778 3426.7 0 0 0 0 440.25 0 357.71 0 0 0 1359.2 1269.6 116 464 115 984;985;986;987 959 959 1 AGNFYVPAEPK Unmodified 1191.5924 0.59242362 388 P18124;A8MUD9;C9JZ88;C9JIJ5 RPL7 60S ribosomal protein L7 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 2 52.279 54.756 2 0.00036796 14387 Miao_Sh-H9_proteinG_mass3_141226_01 122.18 83.428 39790 0 0 0 1927.4 2540.7 10915 180.18 0 0 9911.5 13049 1266.7 117 388 116 988;989;990;991;992;993;994;995;996 960;961;962;963;964;965;966;967;968 964 9 AGNLGGGVVTIER Unmodified 1241.6728 0.67279921 250 P35268;K7ERI7;K7EJT5;K7EP65;K7EKS7;K7ELC4;K7EMH1 RPL22 60S ribosomal protein L22 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 2 1 1 2 2 2 1 1 52.238 54.46 2 1.7946E-71 12483 Miao_Sh-c_proteinG_mass3_141226_03 203.76 159.15 85389 0 0 2136.8 0 0 22071 5723.3 0 0 19083 18209 18167 118 250 117 997;998;999;1000;1001;1002;1003;1004;1005;1006;1007;1008;1009;1010 969;970;971;972;973;974;975;976;977;978;979;980;981 972 13 AGPIWDLR Unmodified 926.4974 0.49740102 286;281 O60506-4;O60506-3;O60506;O60506-2;O60506-5;O43390;O43390-2;O43390-4;O43390-3;B4DT28 SYNCRIP;HNRNPR Heterogeneous nuclear ribonucleoprotein Q;Heterogeneous nuclear ribonucleoprotein R no no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 1 1 68.155 70.317 2 0.00074671 20127 Miao_Sh-H9_proteinG_mass3_141226_01 121.85 78.08 30227 0 0 816.03 5507.4 5547 3717.4 0 7811.8 0 3072.3 1798.2 1956.4 119 286;281 118 1011;1012;1013;1014;1015;1016;1017;1018;1019 982;983;984;985;986;987;988;989;990;991 989 10 AGTQIENIDEDFR Unmodified 1506.6951 0.69505079 283 O43707;F5GXS2;O43707-3;K7EP19 ACTN4 Alpha-actinin-4 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching 2 1 2 2 1 1 2 2 1 1 67.635 66.804 2 5.7229E-05 11752 Miao_Sh-H9_Flag_mass3_141226_03 89.507 63.776 26407 2016.8 1267 0 6524.5 0 1478 1756.4 2440.6 911.34 4962.9 3984.3 1064.9 120 283 119 1020;1021;1022;1023;1024;1025;1026;1027;1028;1029;1030;1031;1032;1033;1034 992;993;994;995;996;997 996 6 AGTQIENIDEDFRDGLK Unmodified 1919.9225 0.92248455 283 O43707;F5GXS2;O43707-3;K7EP19 ACTN4 Alpha-actinin-4 yes no 0 0 0 0 1 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 2 1 2 1 1 2 1 2 73.878 73.197 3 3.2346E-21 19549 Miao_Sh-c_proteinG_mass3_141226_03 141.55 102.54 26576 2665.8 0 1002.4 373.83 1288.7 5083.5 3699.1 0 1034.1 2989.1 549.8 7889.7 121 283 120 1035;1036;1037;1038;1039;1040;1041;1042;1043;1044;1045;1046;1047;1048 998;999;1000;1001;1002;1003;1004;1005;1006;1007;1008 1001 11 AGTVVLDDVELR Acetyl (Protein N-term) 1327.6983 0.69834526 408 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 1 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 90.145 76.561 2 0.0046814 26587 Miao_Sh-c_proteinG_mass3_141226_03 61.11 40.906 0 0 0 0 0 0 0 0 0 0 0 0 0 122 408 121 1049 1009 1009 1 AGVLAHLEEER Unmodified 1222.6306 0.63060004 433;434 P35579;P35579-2;P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH9;MYH10 Myosin-9;Myosin-10 no no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 3 2 4 1 3 1 6 5 7 62.186 60.716 2;3 3.0182E-39 7022 Miao_Sh-c_proteinG_mass3_141226_02 181.87 127.81 131980 3154.9 5317.1 1550 13918 12676 22270 5028.2 7411.1 6216.9 22496 14203 17743 123 433;434 122 1050;1051;1052;1053;1054;1055;1056;1057;1058;1059;1060;1061;1062;1063;1064;1065;1066;1067;1068;1069;1070;1071;1072;1073;1074;1075;1076;1077;1078;1079;1080;1081;1082;1083;1084;1085;1086 1010;1011;1012;1013;1014;1015;1016;1017;1018;1019;1020;1021;1022;1023;1024;1025;1026;1027;1028;1029;1030;1031;1032;1033;1034;1035;1036;1037;1038;1039;1040;1041;1042;1043;1044;1045;1046;1047;1048;1049;1050;1051;1052;1053;1054;1055;1056;1057;1058;1059;1060;1061;1062;1063;1064;1065;1066;1067;1068;1069;1070;1071;1072;1073;1074;1075 1018 66 AGVNTVTTLVENK Unmodified 1344.7249 0.72489436 509 P62424;Q5T8U3;Q5T8U2 RPL7A 60S ribosomal protein L7a yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 3 1 1 1 2 58.215 60.09 2;3 2.7879E-88 14840 Miao_Sh-c_proteinG_mass3_141226_03 217.57 155.01 233970 0 0 0 8230.5 6402.7 27513 1951.5 7428.2 3734.5 63936 58139 56639 124 509 123 1087;1088;1089;1090;1091;1092;1093;1094;1095;1096;1097;1098;1099 1076;1077;1078;1079;1080;1081;1082;1083;1084;1085;1086;1087;1088;1089;1090;1091;1092 1080 17 AGVNTVTTLVENKK Unmodified 1472.8199 0.81985737 509 P62424;Q5T8U3;Q5T8U2 RPL7A 60S ribosomal protein L7a yes no 0 0 0 0 1 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 51.032 53.701 3 6.997E-05 12369 Miao_Sh-c_proteinG_mass3_141226_03 118.26 87.372 18318 0 0 0 2300.7 2496.2 11154 0 2367.3 0 0 0 0 125 509 124 1100;1101;1102;1103;1104 1093;1094;1095;1096 1095 3 AHFGLPSVEAEDK Unmodified 1398.6779 0.67794416 25 Q9BXS5;K7EJL1;B4DDG7;E7ENJ6;Q9BXS5-2;K7EQX3 AP1M1 AP-1 complex subunit mu-1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 51.425 57.29 3 0.0018267 13653 Miao_Sh-c_proteinG_mass3_141226_03 70.089 52.016 0 0 0 0 0 0 0 0 0 0 0 0 0 126 25 125 1105 1097 1097 1 AHLGTALK Unmodified 809.47594 0.4759373 502 P62266;D6RD47;D6RDJ2;D6RIX0;D6R9I7 RPS23 40S ribosomal protein S23 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 29.57 29.971 2 0.036088 3216 Miao_Sh-c_Flag_mass3_141226_01 71.379 28.256 336.37 178.05 0 158.32 0 0 0 0 0 0 0 0 0 127 502 126 1106;1107 1098 1098 1 AHQVVEDGYEFFAK Unmodified 1638.7678 0.7678218 497 P62136;E9PMD7;P62136-2;P62136-3;P62140;P36873;F8VYE8;F8W0W8;P36873-2 PPP1CA;PPP1CB;PPP1CC Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 2 1 1 1 1 69.138 67.634 3 1.3719E-05 10902 Miao_Sh-c_Flag_mass3_141226_02 90.707 80.358 7582 0 1130.6 0 0 0 3081.4 0 0 2737.3 632.76 0 0 128 497 127 1108;1109;1110;1111;1112;1113 1099;1100;1101;1102 1099 4 AHSPASLSFASYR Unmodified 1392.6786 0.67861287 664 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 1 1 2 1 1 1 2 55.629 55.815 3 0.00089637 7960 Miao_Sh-c_proteinG_mass3_141226_02 72.705 48.981 8730.9 197.85 0 0 0 1589.3 1708.3 1328.3 0 631.85 937.68 0 2337.6 129 664 128 1114;1115;1116;1117;1118;1119;1120;1121;1122 1103;1104;1105;1106 1103 4 AIAALISEK Unmodified 914.54368 0.54368251 609 Q8IXB1;Q8IXB1-2 DNAJC10 DnaJ homolog subfamily C member 10 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 52.572 54.139 2 6.9423E-08 12306 Miao_Sh-c_proteinG_mass3_141226_03 126.07 77.273 28969 0 0 0 0 0 0 0 0 758.23 11748 8580.9 7882 130 609 129 1123;1124;1125;1126;1127 1107;1108;1109;1110 1107 4 AIADTGANVVVTGGK Unmodified 1371.7358 0.73579339 469 P50990;P50990-2;P50990-3;H7C4C8 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 2 1 1 3 1 2 47.741 49.05 2 1.048E-12 12111 Miao_Sh-H9_proteinG_mass3_141226_01 128.71 73.246 13538 581.1 937.31 0 240.5 0 0 982.81 0 0 1796.6 3984.4 5015.3 131 469 130 1128;1129;1130;1131;1132;1133;1134;1135;1136;1137;1138 1111;1112;1113;1114;1115 1114 5 AIAELGIYPAVDPLDSTSR Unmodified 1987.0262 0.026221336 331 P06576;H0YH81;F8VPV9;F8VQY0 ATP5B ATP synthase subunit beta, mitochondrial;ATP synthase subunit beta yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 2 104.18 93.577 2;3 8.2275E-06 32721 Miao_Sh-H9_proteinG_mass3_141226_02 68.41 51.158 3101.5 0 0 0 0 0 0 0 0 0 700.42 2401.1 0 132 331 131 1139;1140;1141 1116;1117;1118 1117 3 AIAFLQQPR Unmodified 1042.5924 0.59236404 395 P22102;P22102-2 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 59.77 61.644 2 0.035026 16897 Miao_Sh-H9_proteinG_mass3_141226_01 63.419 19.611 5915.9 0 589.29 0 0 0 1047.2 0 0 189.56 3256.5 0 833.39 133 395 132 1142;1143;1144;1145;1146 1119 1119 1 AIEPPPLDAVIEAEHTLR Unmodified 1970.0473 0.047291129 548 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 2 100.01 94.248 3 7.1124E-07 20722 Miao_Sh-c_proteinG_mass3_141226_01 75.548 57.135 21488 0 626.34 0 4147.6 2119.1 501.69 0 0 5218.1 1305 6618.8 951.05 134 548 133 1147;1148;1149;1150;1151;1152;1153;1154;1155 1120;1121;1122;1123 1120 3 AIFAGYK Unmodified 768.41703 0.41702544 87 P18077;F8WBS5;F8WB72;C9K025 RPL35A 60S ribosomal protein L35a yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 2 2 50.918 51.389 2 0.024068 11388 Miao_Sh-H9_proteinG_mass3_141226_03 77.374 44.403 9842.3 0 567.92 377.76 388.41 0 3321.7 506.05 813.05 877.1 0 2782.2 208.19 135 87 134 1156;1157;1158;1159;1160;1161;1162;1163;1164;1165;1166 1124;1125;1126;1127 1127 4 AIGGGLSSVGGGSSTIK Unmodified 1446.7678 0.7678218 98 P02538;CON__P02538;P48668;CON__P48668 KRT6A;KRT6C Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 2 2 50.688 52.313 2 3.4751E-13 13165 Miao_Sh-H9_proteinG_mass3_141226_02 97.214 54.131 11688 0 543.78 0 683.49 0 0 0 0 0 442.81 6369.5 3648.2 + 136 98 135 1167;1168;1169;1170;1171;1172;1173 1128;1129;1130;1131;1132 1129 5 AIGSASEGAQSSLQEVYHK Unmodified 1960.949 0.94903365 419 P28066;P28066-2 PSMA5 Proteasome subunit alpha type-5 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 1 1 53.047 53.968 3 0.0040058 13764 Miao_Sh-H9_proteinG_mass3_141226_02 47.222 35.021 13179 1474.1 1283.5 0 938.74 124.65 0 2542.3 2342.2 2763.9 0 1709.7 0 137 419 136 1174;1175;1176;1177;1178;1179;1180;1181 1133 1133 1 AIIIFVPVPQLK Unmodified 1336.8482 0.84824438 496 P62081;B5MCP9 RPS7 40S ribosomal protein S7 yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 3 1 2 2 2 2 1 2 2 2 2 104.12 99.892 2;3 1.9478E-08 22152 Miao_Sh-H9_Flag_mass3_141226_01 97.734 37.826 356480 3001.7 27810 2576.6 43691 25386 39666 22777 20822 27514 61391 44073 37773 138 496 137 1182;1183;1184;1185;1186;1187;1188;1189;1190;1191;1192;1193;1194;1195;1196;1197;1198;1199;1200;1201;1202;1203 1134;1135;1136;1137;1138;1139;1140;1141;1142;1143;1144;1145;1146;1147;1148;1149;1150;1151;1152;1153;1154;1155;1156;1157;1158;1159;1160;1161;1162;1163;1164;1165;1166;1167;1168;1169;1170;1171;1172;1173;1174;1175;1176;1177;1178;1179;1180;1181;1182 1159 48 AILVDLEPGTMDSVR Oxidation (M) 1630.8236 0.82362212 338;566;564 P07437;Q5JP53;E9PBJ4;G3V5W4;G3V2R8;G3V3R4;G3V2N6;Q9BVA1;Q13885;Q13509 TUBB;TUBB3;TUBB2B;TUBB2A Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-3 chain no no 0 0 1 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 69.967 70.018 2 0.0053424 13405 Miao_Sh-H9_Flag_mass3_141226_03 62.861 44.725 0 0 0 0 0 0 0 0 0 0 0 0 0 139 338;566;564 138 1204 1183 1183 46 1 AINSNYYLAMNKK Oxidation (M);2 GlyGly (K) 1772.8516 0.85156821 278 O15520 FGF10 Fibroblast growth factor 10 yes yes 0 2 1 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 62.511 62.962 2 0.0048584 17432 Miao_Sh-H9_proteinG_mass3_141226_01 54.772 19.061 0 0 0 0 0 0 0 0 0 0 0 0 0 140 278 139 1205 1184 1184 35 1 AINTLNGLR Unmodified 970.55598 0.55597854 46 Q15717;B4DVB8;M0QZR9;P26378;Q12926;B1AM48;B1APY9;B1APY8;B1AM49;Q12926-2;P26378-4;P26378-2;P26378-5;P26378-3 ELAVL1;ELAVL4;ELAVL2 ELAV-like protein 1;ELAV-like protein 4;ELAV-like protein 2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 49.262 50.114 2 0.021642 12388 Miao_Sh-H9_proteinG_mass3_141226_01 68.016 30.467 0 0 0 0 0 0 0 0 0 0 0 0 0 141 46 140 1206 1185 1185 1 AIPQLQGYLR Unmodified 1157.6557 0.65569258 542 Q02878 RPL6 60S ribosomal protein L6 yes yes 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 4 9 1 2 1 5 6 2 75.975 72.712 2 7.7071E-05 20529 Miao_Sh-H9_proteinG_mass3_141226_02 123.5 65.257 135440 0 9866.6 0 28432 0 0 29878 587.11 26109 23109 978.23 16478 142 542 141 1207;1208;1209;1210;1211;1212;1213;1214;1215;1216;1217;1218;1219;1220;1221;1222;1223;1224;1225;1226;1227;1228;1229;1230;1231;1232;1233;1234;1235;1236;1237;1238;1239 1186;1187;1188;1189;1190;1191;1192;1193;1194;1195;1196;1197;1198;1199;1200;1201;1202;1203;1204;1205;1206;1207;1208;1209;1210;1211;1212;1213;1214;1215;1216;1217;1218;1219;1220;1221 1210 36 AITDGQAGFGNDTLSK Unmodified 1593.7635 0.76346471 601 Q7Z739;R4GN55 YTHDF3 YTH domain-containing family protein 3 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 50.479 54.714 2 6.2057E-06 14265 Miao_Sh-H9_proteinG_mass3_141226_01 84.071 65.446 3398.4 0 0 0 0 0 1621.5 0 0 0 0 1776.9 0 143 601 142 1240;1241;1242;1243 1222;1223;1224;1225 1223 4 AITGASLADIMAK Unmodified 1260.6748 0.67477304 81 P83731;C9JXB8;C9JNW5 RPL24 60S ribosomal protein L24 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 2 2 2 1 2 2 2 69.166 67.541 2 0.0052356 15409 Miao_Sh-H9_Flag_mass3_141226_02 64.534 33.056 20112 0 852.8 0 225.31 0 3743.7 989.69 4117.4 2971.5 3602.1 1322.8 2287.1 144 81 143 1244;1245;1246;1247;1248;1249;1250;1251;1252;1253;1254;1255;1256;1257;1258 1226;1227;1228;1229 1228 3 AITGASLADIMAK Oxidation (M) 1276.6697 0.66968766 81 P83731;C9JXB8;C9JNW5 RPL24 60S ribosomal protein L24 yes no 0 0 1 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 57.057 59.914 2 0.019774 15277 Miao_Sh-H9_proteinG_mass3_141226_03 58.116 38.66 0 0 0 0 0 0 0 0 0 0 0 0 0 145 81 143 1259 1230 1230 9 1 AITVFSPDGHLFQVEYAQEAVK Unmodified 2448.2325 0.23252572 269 O14818 PSMA7 Proteasome subunit alpha type-7 no no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 83.656 85.293 3 0.00020398 19621 Miao_Sh-H9_Flag_mass3_141226_03 55.128 47.892 3152.3 648.99 1887.5 0 0 615.86 0 0 0 0 0 0 0 146 269 144 1260;1261;1262;1263;1264 1231;1232;1233 1233 2 AIVICPTDEDLK Unmodified 1372.6908 0.69081704 643 Q9BUJ2;Q9BUJ2-2;B7Z4B8;Q9BUJ2-4;M0R3F1;Q9BUJ2-3 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS 1 1 1 2 1 1 57.295 60.346 2 7.0728E-10 15325 Miao_Sh-H9_proteinG_mass3_141226_03 140.91 104.91 152180 0 0 1190.3 15695 15926 68513 0 0 1125.8 0 0 49730 147 643 145 1265;1266;1267;1268;1269;1270;1271 1234;1235;1236;1237 1237 4 AKFEELNMDLFR Oxidation (M) 1527.7392 0.73916421 355 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 1 0 1 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 67.809 68.952 3 0.018808 11787 Miao_Sh-c_Flag_mass3_141226_02 71.558 49.502 6699.3 1636.8 1685.9 0 634.71 442.79 0 0 0 2299 0 0 0 148 355 146 1272;1273;1274;1275;1276 1238 1238 48 1 AKFEELNMDLFR Unmodified 1511.7442 0.74424959 355 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 0 1 By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 81.334 80.866 3 0.0014234 15265 Miao_Sh-c_Flag_mass3_141226_02 93.623 62.145 10877 0 0 0 0 0 0 3902.3 3530.7 3444.4 0 0 0 149 355 146 1277;1278;1279;1280 1239;1240;1241;1242;1243 1239 5 ALAAAGYDVEK Unmodified 1106.5608 0.56078914 378;352;379 P16402;Q02539;P22492;P10412;P16403 HIST1H1D;HIST1H1A;HIST1H1T;HIST1H1E;HIST1H1C Histone H1.3;Histone H1.1;Histone H1t;Histone H1.4;Histone H1.2 no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 1 1 2 1 1 1 2 1 1 3 45.174 46.938 2 8.9892E-15 9823 Miao_Sh-c_proteinG_mass3_141226_03 151.07 96.98 583900 16882 14530 14378 10973 10104 154310 591.09 16485 0 2422.8 187630 155590 150 378;352;379 147 1281;1282;1283;1284;1285;1286;1287;1288;1289;1290;1291;1292;1293;1294;1295;1296;1297;1298 1244;1245;1246;1247;1248;1249;1250;1251;1252;1253;1254;1255;1256;1257;1258;1259;1260;1261;1262;1263;1264;1265;1266;1267;1268;1269;1270;1271 1257 28 ALAAFLK Unmodified 732.45341 0.45341094 442 P39019;M0R2L9;M0QXK4;M0QYF7;M0R140 RPS19 40S ribosomal protein S19 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 2 1 1 2 2 3 66.977 65.192 1;2 0.0047639 10074 Miao_Sh-H9_Flag_mass3_141226_03 117.56 19.921 121790 3863.9 4288.8 4253.3 5414.5 5414.5 29411 6898.8 7783.8 8035.3 20432 13493 12498 151 442 148 1299;1300;1301;1302;1303;1304;1305;1306;1307;1308;1309;1310;1311;1312;1313;1314;1315;1316 1272;1273;1274;1275;1276;1277;1278;1279;1280;1281;1282;1283;1284;1285;1286;1287;1288;1289;1290;1291;1292;1293;1294;1295;1296;1297;1298;1299;1300;1301;1302;1303;1304;1305;1306;1307;1308;1309;1310;1311;1312 1288 41 ALAAGGVGSIVR Unmodified 1069.6244 0.62439245 277 O15511;O15511-2 ARPC5 Actin-related protein 2/3 complex subunit 5 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 1 1 52.542 55.274 2 0.0010057 13458 Miao_Sh-H9_proteinG_mass3_141226_03 83.182 50.862 0 0 0 0 0 0 0 0 0 0 0 0 0 152 277 149 1317;1318 1313;1314 1314 2 ALAAGGYDVEK Unmodified 1092.5451 0.54513908 377 P16401 HIST1H1B Histone H1.5 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 3 1 1 1 1 1 1 1 1 43.031 44.639 2 0.00027402 4504 Miao_Sh-c_proteinG_mass3_141226_02 124.42 96.54 381020 10472 9118.3 10400 53.715 5225.9 91351 9088.2 0 10095 91506 71261 72452 153 377 150 1319;1320;1321;1322;1323;1324;1325;1326;1327;1328;1329;1330;1331;1332;1333;1334 1315;1316;1317;1318;1319;1320;1321;1322;1323;1324;1325;1326;1327;1328;1329;1330;1331;1332;1333;1334;1335;1336;1337;1338;1339;1340;1341 1323 27 ALADDDFLTVTGK Unmodified 1364.6824 0.68236084 429 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 71.657 71.708 2 0.0097845 20962 Miao_Sh-H9_proteinG_mass3_141226_01 57.034 41.891 0 0 0 0 0 0 0 0 0 0 0 0 0 154 429 151 1335 1342 1342 1 ALAELFGLLVK Unmodified 1172.7169 0.71689585 600 Q7Z6Z7;Q7Z6Z7-2;Q7Z6Z7-3;H0Y5W0;Q5H962 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 106.1 106.26 2 0.0050374 26331 Miao_Sh-H9_Flag_mass3_141226_03 83.081 48.695 9937.4 0 1877.6 2105.6 0 0 0 2515.2 0 3439 0 0 0 155 600 152 1336;1337;1338;1339 1343;1344;1345 1345 3 ALAETSYVK Unmodified 980.51786 0.51786169 451 P43358;P43355;P43361 MAGEA4;MAGEA1;MAGEA8 Melanoma-associated antigen 4;Melanoma-associated antigen 1;Melanoma-associated antigen 8 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 1 1 1 40.326 42.203 2 0.030617 9230 Miao_Sh-H9_proteinG_mass3_141226_03 65.535 42.226 10276 380.33 511.28 501.33 0 398.06 137.78 0 498.75 0 2679.4 2567.8 2601.2 156 451 153 1340;1341;1342;1343;1344;1345;1346;1347;1348 1346 1346 1 ALAVGGLGSIIR Unmodified 1125.687 0.68699271 640 Q9BPX5 ARPC5L Actin-related protein 2/3 complex subunit 5-like protein yes yes 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 2 2 3 87.113 78.225 2 0.00038667 23125 Miao_Sh-H9_proteinG_mass3_141226_01 102.4 64.842 11176 0 864.61 0 2201.1 0 1974.7 0 0 0 5405.1 0 730.94 157 640 154 1349;1350;1351;1352;1353;1354;1355;1356;1357;1358;1359 1347;1348;1349;1350;1351;1352;1353;1354 1352 8 ALCLLLGPDFFTDVITIETADHAR Unmodified 2687.3629 0.36288796 573 Q14764 MVP Major vault protein yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 115.82 98.63 3 4.6805E-41 37099 Miao_Sh-H9_proteinG_mass3_141226_03 123.12 108.5 0 0 0 0 0 0 0 0 0 0 0 0 0 158 573 155 1360 1355 1355 1 ALDEGDIALLK Unmodified 1156.634 0.63395408 437 P35998;C9JLS9 PSMC2 26S protease regulatory subunit 7 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 68.985 70.488 2 0.00024322 11948 Miao_Sh-c_Flag_mass3_141226_03 119.74 77.533 0 0 0 0 0 0 0 0 0 0 0 0 0 159 437 156 1361 1356 1356 1 ALDFIASK Unmodified 863.47527 0.4752686 283;362 O43707;Q08043;G3V2W4;G3V2N5;G3V5M4;G3V2X9;G3V2E8;P12814;P12814-2;P12814-3;P12814-4;H9KV75 ACTN4;ACTN3;ACTN1 Alpha-actinin-4;Alpha-actinin-3;Alpha-actinin-1 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 54.233 56.948 2 0.00073911 13122 Miao_Sh-c_proteinG_mass3_141226_03 122.44 63.621 24389 0 0 0 0 574.77 5618.3 0 0 815.28 7109.3 5276.8 4994.6 160 283;362 157 1362;1363;1364;1365;1366;1367 1357;1358;1359;1360;1361;1362;1363;1364 1358 8 ALEAVFGK Unmodified 833.4647 0.46470391 201 P38159;H0Y6E7;H3BT71;P38159-2;H3BR27;P38159-3;H3BNC1 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 1 53.927 55.519 2 0.0089389 12763 Miao_Sh-c_proteinG_mass3_141226_03 89.698 22.663 11888 0 0 0 0 0 0 0 0 2076.4 4132.4 2622.1 3057.3 161 201 158 1368;1369;1370;1371;1372;1373 1365;1366;1367;1368;1369;1370;1371;1372 1365 8 ALEEALEAK Unmodified 972.51278 0.51277632 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 no no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 1 1 1 1 43.05 45.615 2 6.1331E-25 11237 Miao_Sh-H9_proteinG_mass3_141226_01 156.83 92.173 42832 0 615.98 0 680.73 0 15237 0 0 0 0 14350 11949 162 434 159 1374;1375;1376;1377;1378;1379;1380 1373;1374;1375;1376;1377;1378;1379;1380;1381 1377 9 ALEEANADLEVK Unmodified 1300.6511 0.65106071 97;102 P02533;CON__P02533;P19012;CON__P19012;P08779;CON__P08779 KRT14;KRT15;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 16 no no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 2 1 4 1 1 1 1 4 54.331 56.987 2 4.214E-54 12800 Miao_Sh-H9_proteinG_mass3_141226_01 190.85 138.87 77513 0 0 0 1318.3 1200.8 15644 623.41 447.05 0 22276 19471 16533 + 163 97;102 160 1381;1382;1383;1384;1385;1386;1387;1388;1389;1390;1391;1392;1393;1394;1395 1382;1383;1384;1385;1386;1387;1388;1389;1390;1391;1392;1393;1394;1395;1396;1397;1398 1389 17 ALEEANTELEVK Unmodified 1344.6773 0.67727546 109 Q04695;CON__Q04695;CON__Q9QWL7;K7EPJ9 KRT17 Keratin, type I cytoskeletal 17 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 3 49.116 51.405 2 0.0012801 13031 Miao_Sh-H9_proteinG_mass3_141226_01 96.371 72.282 7489.5 0 0 0 0 0 0 0 0 0 3696 0 3793.5 + 164 109 161 1396;1397;1398;1399 1399;1400;1401 1399 3 ALEESNYELEGK Unmodified 1380.6409 0.64088996 104 P13645;CON__P13645;CON__P02535-1 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 1 1 1 1 1 47.726 49.321 2 5.9385E-23 11245 Miao_Sh-H9_proteinG_mass3_141226_03 167.73 130.67 114300 22.357 1098.1 0 988.16 1232.3 24157 3557.1 4357.9 4058.5 31844 21334 21648 + 165 104 162 1400;1401;1402;1403;1404;1405;1406;1407;1408;1409;1410;1411 1402;1403;1404;1405;1406;1407;1408;1409;1410;1411;1412;1413;1414;1415;1416;1417;1418;1419 1418 18 ALEHFTDLYDIK Unmodified 1463.7296 0.72964538 535 Q00610;Q00610-2 CLTC Clathrin heavy chain 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 2 1 1 2 2 1 72.276 71.111 2;3 0.00083956 13381 Miao_Sh-H9_Flag_mass3_141226_03 89.663 62.235 27187 0 3386.1 0 0 1918.8 918.85 7321.9 0 12699 942.34 0 0 166 535 163 1412;1413;1414;1415;1416;1417;1418;1419;1420 1420;1421;1422 1422 3 ALEIIPR Unmodified 810.49634 0.49633839 638 Q99832;Q99832-3;F5GZK5;Q99832-4;Q99832-2;B7Z1C9 CCT7 T-complex protein 1 subunit eta yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 1 1 55.421 57.245 2 0.0080833 8575 Miao_Sh-H9_Flag_mass3_141226_01 107.32 49.15 7254.2 0 0 0 416.7 0 2384.8 1187.3 1558 0 0 0 1707.5 167 638 164 1421;1422;1423;1424;1425;1426 1423;1424;1425;1426 1424 4 ALELDPNLYR Unmodified 1202.6295 0.62953741 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 no no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 2 1 2 68.543 70.315 2 8.6858E-20 20164 Miao_Sh-H9_proteinG_mass3_141226_01 169.37 122.91 43753 1033.3 861.52 0 4713.2 5405.4 8683.1 0 0 1205.2 9452.2 5565.2 6834.3 168 434 165 1427;1428;1429;1430;1431;1432;1433;1434;1435;1436;1437 1427;1428;1429;1430;1431;1432;1433;1434;1435;1436;1437;1438 1431 12 ALELDSNLYR Unmodified 1192.6088 0.60880197 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 5 7 1 3 3 4 3 5 67.354 66.394 2;3 2.9936E-88 16534 Miao_Sh-c_proteinG_mass3_141226_03 207.6 153.63 195690 6716.3 5368.1 5960.6 818.99 1707.5 5038.6 1805 0 10793 48242 68906 40338 169 433 166 1438;1439;1440;1441;1442;1443;1444;1445;1446;1447;1448;1449;1450;1451;1452;1453;1454;1455;1456;1457;1458;1459;1460;1461;1462;1463;1464;1465;1466;1467;1468;1469;1470;1471;1472;1473;1474;1475 1439;1440;1441;1442;1443;1444;1445;1446;1447;1448;1449;1450;1451;1452;1453;1454;1455;1456;1457;1458;1459;1460;1461;1462;1463;1464;1465;1466;1467;1468;1469;1470;1471;1472;1473 1451 34 ALELEQER Unmodified 986.50327 0.50327426 412 P26038 MSN Moesin yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 42.616 43.568 2 0.046423 10151 Miao_Sh-H9_proteinG_mass3_141226_01 60.478 24.082 0 0 0 0 0 0 0 0 0 0 0 0 0 170 412 167 1476 1474 1474 1 ALELTGLK Unmodified 843.50657 0.50656873 389 P19338 NCL Nucleolin yes yes 0 0 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 1 1 1 56.537 58.03 2 0.0015471 15560 Miao_Sh-H9_proteinG_mass3_141226_01 118.5 36.043 44835 1055.8 1142.4 913.15 0 0 9896.6 1557.3 0 2205.3 11118 8210.9 8735.1 171 389 168 1477;1478;1479;1480;1481;1482;1483;1484;1485;1486 1475;1476;1477;1478;1479;1480;1481;1482;1483 1481 9 ALEQQVEEMK Unmodified 1203.5805 0.58053831 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 49.79 51.719 2 0.0006946 12117 Miao_Sh-H9_proteinG_mass3_141226_03 114.4 56.869 0 0 0 0 0 0 0 0 0 0 0 0 0 172 433 169 1487;1488 1484;1485 1485 2 ALESPERPFLAILGGAK Unmodified 1767.9883 0.98831969 63 P00558;B7Z7A9 PGK1 Phosphoglycerate kinase 1 yes no 0 0 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 4 2 1 1 1 91.148 89.788 3 2.6601E-14 18570 Miao_Sh-H9_Flag_mass3_141226_01 114.01 85.028 29362 3061.1 3217.3 3462 1209.1 0 0 0 6553.4 4567.2 7291.4 0 0 173 63 170 1489;1490;1491;1492;1493;1494;1495;1496;1497;1498;1499;1500 1486;1487;1488;1489;1490;1491;1492;1493;1494;1495;1496;1497;1498;1499;1500;1501 1492 16 ALESSIAPIVIFASNR Unmodified 1686.9305 0.93047046 672 Q9Y265;Q9Y265-2;H7C4G5;E7ETR0;J3QLR1;H7C4I3 RUVBL1 RuvB-like 1 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 94.16 93.759 3 0.00029296 36221 Miao_Sh-H9_proteinG_mass3_141226_01 70.41 54.061 3228 807.71 0 0 0 0 0 938.08 0 1482.2 0 0 0 174 672 171 1501;1502;1503;1504 1502;1503;1504 1504 3 ALEWLGGIDTGGSTGYNPGLK Unmodified 2105.0429 0.042934032 94 CON__ENSEMBL:ENSBTAP00000033053 yes yes 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 1 104.31 94.168 3 1.4167E-05 18822 Miao_Sh-c_proteinG_mass3_141226_02 61.342 49.074 5450.8 0 2945.4 0 0 0 1777.8 0 0 0 0 0 727.52 + 175 94 172 1505;1506;1507;1508 1505;1506 1505 2 ALEWLGVIYSGGSTGYNPALK Unmodified 2195.1263 0.12626973 89 CON__ENSEMBL:ENSBTAP00000011227 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 103.73 99.836 3 0.00014602 23786 Miao_Sh-c_proteinG_mass3_141226_01 58.712 46.794 5119.2 0 0 0 3627.7 0 0 740.85 0 0 750.65 0 0 + 176 89 173 1509;1510;1511 1507 1507 0 ALGDYDYK Unmodified 943.42871 0.42871234 297;296 O75688-2;C9JIR6;O75688-4;B8ZZF0;O75688-5;O75688 PPM1B Protein phosphatase 1B no no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 2 2 1 45.324 45.755 2 0.019175 5377 Miao_Sh-H9_Flag_mass3_141226_02 78.149 55.368 9965.3 2484.7 1899.9 2386.3 0 0 0 2475.6 0 0 718.67 0 0 177 297;296 174 1512;1513;1514;1515;1516;1517;1518;1519;1520 1508;1509;1510;1511;1512;1513 1510 6 ALGGEDVR Unmodified 815.41373 0.41373097 103 CON__P12763 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 1 1 31.905 32.231 2 0.0078486 3537 Miao_Sh-H9_Flag_mass3_141226_01 91.069 26.265 1711.3 274.87 273.73 322.52 0 0 0 0 291.78 274.7 0 0 273.69 + 178 103 175 1521;1522;1523;1524;1525;1526;1527 1514;1515;1516;1517 1517 4 ALGLGVEQLPVVFEDVVLHQATILPK Unmodified 2784.579 0.57895239 464 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS 1 1 2 116.35 107.81 3 9.5479E-09 28962 Miao_Sh-H9_Flag_mass3_141226_01 59.561 55.372 0 0 0 0 0 0 0 0 0 0 0 0 0 179 464 176 1528;1529;1530;1531 1518;1519;1520;1521 1519 4 ALGQNPTNAEVLK Unmodified 1353.7252 0.72522871 370;179;198 P60660;P60660-2;F8W1R7;G3V1V0;B7Z6Z4;F8VPF3;J3KND3;G8JLA2;P14649;F8W1I5 MYL6;PDE6H;MYL6B Myosin light polypeptide 6;Myosin light chain 6B no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 4 4 1 2 3 2 2 1 4 3 47.713 49.119 2;3 5.1446E-45 5499 Miao_Sh-c_proteinG_mass3_141226_01 187.45 139.48 1676100 69306 59824 61033 64368 51077 19008 135880 126810 145690 29104 403970 510070 180 179;198;370 177 1532;1533;1534;1535;1536;1537;1538;1539;1540;1541;1542;1543;1544;1545;1546;1547;1548;1549;1550;1551;1552;1553;1554;1555;1556;1557;1558;1559;1560;1561;1562 1522;1523;1524;1525;1526;1527;1528;1529;1530;1531;1532;1533;1534;1535;1536;1537;1538;1539;1540;1541;1542;1543;1544;1545;1546;1547;1548;1549;1550;1551;1552;1553;1554;1555;1556;1557;1558;1559;1560;1561;1562;1563;1564;1565;1566;1567;1568;1569;1570;1571;1572;1573;1574;1575;1576;1577;1578;1579;1580 1540 59 ALIAAQYSGAQVR Unmodified 1346.7306 0.73064844 417 P26641;B4DTG2 EEF1G Elongation factor 1-gamma yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 1 1 2 1 1 1 1 52.927 54.906 2;3 1.8784E-08 14255 Miao_Sh-H9_proteinG_mass3_141226_01 138.02 94.518 17918 0 0 0 1114.3 0 6638.8 4214.8 0 0 5950.1 0 0 181 417 178 1563;1564;1565;1566;1567;1568;1569;1570 1581;1582;1583;1584;1585;1586;1587;1588;1589;1590;1591 1589 11 ALIAGGGAPEIELALR Unmodified 1549.8828 0.88279198 65 P50991;B7Z9L0;P50991-2;B7Z2F4 CCT4 T-complex protein 1 subunit delta yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 2 1 1 2 2 2 2 1 91.156 89.101 2 4.2174E-09 17981 Miao_Sh-H9_Flag_mass3_141226_01 103.88 61.157 12032 2470.3 0 0 3649.5 2319.5 164.5 0 0 0 0 3428.5 0 182 65 179 1571;1572;1573;1574;1575;1576;1577;1578;1579;1580;1581;1582;1583 1592;1593;1594;1595;1596;1597;1598;1599;1600;1601;1602 1599 10 ALIEVLQPLIAEHQAR Unmodified 1800.0258 0.025767826 401 P23381;P23381-2 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 2 1 85.815 87.57 3 0.0017129 17192 Miao_Sh-c_Flag_mass3_141226_02 58.814 43.016 0 0 0 0 0 0 0 0 0 0 0 0 0 183 401 180 1584;1585;1586 1603;1604;1605 1603 3 ALIVEPSR Unmodified 883.51272 0.51271674 622 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 43.492 45.272 2 0.0032513 10873 Miao_Sh-H9_proteinG_mass3_141226_01 98.458 41.177 0 0 0 0 0 0 0 0 0 0 0 0 0 184 622 181 1587;1588 1606;1607 1606 2 ALLAEGVILR Unmodified 1053.6546 0.65462995 236 Q9Y3D9;J3QLR8 MRPS23 28S ribosomal protein S23, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 1 72.307 71.556 2 0.0043003 13619 Miao_Sh-c_proteinG_mass3_141226_02 88.495 39.701 8724.7 0 0 0 2228.6 1834.4 0 0 1500.3 1667.9 1290 203.44 0 185 236 182 1589;1590;1591;1592;1593;1594;1595 1608;1609;1610 1609 3 ALLANALTSALR Unmodified 1212.719 0.71902112 116 P57088;D6RAA6 TMEM33 Transmembrane protein 33 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 2 1 2 1 83.743 83.417 2 2.9546E-07 15990 Miao_Sh-c_Flag_mass3_141226_02 131.17 77.205 3684.7 1462.9 0 0 0 0 0 2221.8 0 0 0 0 0 186 116 183 1596;1597;1598;1599;1600;1601;1602 1611;1612;1613;1614;1615;1616;1617 1612 7 ALLDASETTSTR Unmodified 1263.6307 0.63065962 569 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 44.944 45.896 2 0.0048866 11116 Miao_Sh-H9_proteinG_mass3_141226_01 66.989 47.33 0 0 0 0 0 0 0 0 0 0 0 0 0 187 569 184 1603 1618 1618 1 ALLDFEDK Unmodified 949.47566 0.47566253 573 Q14764;H3BQK6;H3BRL2 MVP Major vault protein yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 2 5 3 3 73.439 68.971 2 1.9787E-26 18015 Miao_Sh-H9_proteinG_mass3_141226_01 182.73 101.61 230290 0 403.49 460.01 14129 9327.3 42822 0 0 0 64344 52537 46262 188 573 185 1604;1605;1606;1607;1608;1609;1610;1611;1612;1613;1614;1615;1616;1617;1618;1619;1620 1619;1620;1621;1622;1623;1624;1625;1626;1627;1628;1629;1630;1631;1632;1633;1634;1635;1636;1637;1638;1639;1640;1641;1642;1643;1644;1645;1646;1647;1648;1649;1650;1651;1652;1653;1654;1655;1656;1657;1658;1659;1660;1661 1629 43 ALLELQLEPEELYQTFQR Unmodified 2219.1474 0.1473991 366 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 2 106.68 106.73 3 7.9718E-07 26229 Miao_Sh-H9_Flag_mass3_141226_02 78.78 63.385 0 0 0 0 0 0 0 0 0 0 0 0 0 189 366 186 1621;1622;1623 1662;1663;1664 1663 3 ALLEVVQSGGK Unmodified 1099.6237 0.62372375 269 O14818;O14818-2 PSMA7 Proteasome subunit alpha type-7 no no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 1 1 1 53.819 55.844 2 0.0036135 8692 Miao_Sh-H9_Flag_mass3_141226_02 102.87 29.639 5981.3 0 620.24 0 0 469.43 0 0 0 2657.7 0 1535.6 698.3 190 269 187 1624;1625;1626;1627;1628;1629;1630 1665;1666;1667 1666 3 ALLFIPR Unmodified 828.52216 0.52215921 344 P08238 HSP90AB1 Heat shock protein HSP 90-beta yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 1 1 2 1 1 3 2 84.96 80.742 2 5.0767E-17 14073 Miao_Sh-H9_Flag_mass3_141226_01 172.15 12.045 51632 5821.1 4339.6 4199.6 4204.8 2417.3 2811.4 7499.6 0 7944.9 2374.2 4429.3 5589.8 191 344 188 1631;1632;1633;1634;1635;1636;1637;1638;1639;1640;1641;1642;1643;1644;1645;1646;1647 1668;1669;1670;1671;1672;1673;1674;1675;1676;1677;1678;1679;1680;1681;1682;1683;1684;1685;1686;1687;1688;1689;1690;1691 1679 23 ALLFVPR Unmodified 814.50651 0.50650915 341 P07900;P07900-2;Q86U12 HSP90AA1 Heat shock protein HSP 90-alpha yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 2 1 2 2 2 2 2 1 1 3 2 73.553 71.814 2 2.6482E-11 12825 Miao_Sh-H9_Flag_mass3_141226_02 166.66 28.125 69150 6870.9 2118.3 6831.9 12098 9463.3 8702 3440.6 4062.6 3573.2 0 6988.1 5001.5 192 341 189 1648;1649;1650;1651;1652;1653;1654;1655;1656;1657;1658;1659;1660;1661;1662;1663;1664;1665;1666;1667 1692;1693;1694;1695;1696;1697;1698;1699;1700;1701;1702;1703;1704;1705;1706;1707;1708;1709;1710;1711 1706 20 ALLLLLVGGVDQSPR Unmodified 1549.9192 0.91917749 430 P33993;P33993-3 MCM7 DNA replication licensing factor MCM7 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 117.17 104.99 3 0.0058432 38073 Miao_Sh-H9_proteinG_mass3_141226_01 53.946 41.315 0 0 0 0 0 0 0 0 0 0 0 0 0 193 430 190 1668 1712 1712 1 ALLNVVDNAR Unmodified 1083.6037 0.60365701 608 Q8IV08;M0QZI4 PLD3 Phospholipase D3 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 63.548 59.037 2 0.0028322 9484 Miao_Sh-H9_Flag_mass3_141226_02 94.692 52.094 5744.2 948.19 0 0 0 0 0 2358.8 1763.4 0 0 0 673.78 194 608 191 1669;1670;1671;1672;1673;1674 1713;1714;1715;1716 1714 4 ALLPELR Unmodified 810.49634 0.49633839 609 Q8IXB1;Q8IXB1-2 DNAJC10 DnaJ homolog subfamily C member 10 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 2 2 71.321 67.576 2 0.0034555 10769 Miao_Sh-c_proteinG_mass3_141226_01 121.29 7.2693 17499 0 0 0 1544.4 0 3872.3 0 0 0 1243.3 6001.1 4837.7 195 609 192 1675;1676;1677;1678;1679;1680;1681;1682 1717;1718;1719;1720;1721;1722;1723;1724;1725;1726 1717 10 ALLQSSASR Unmodified 931.50869 0.50869399 669 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 yes yes 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 1 1 1 1 34.055 34.832 2 0.0097371 3752 Miao_Sh-H9_Flag_mass3_141226_01 80.219 10.22 1799.3 0 181.97 165.01 113.02 0 0 0 195.53 0 637.45 506.34 0 196 669 193 1683;1684;1685;1686;1687;1688;1689 1727;1728;1729 1728 3 ALNENLQDTVEK Unmodified 1372.6834 0.68342347 664 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 2 1 1 48.173 50.88 2 1.9316E-10 12380 Miao_Sh-H9_proteinG_mass3_141226_01 147.73 110.04 17658 0 0 0 0 0 4826.7 0 0 0 6738 481.09 5612.4 197 664 194 1690;1691;1692;1693;1694 1730;1731;1732 1731 3 ALNSIIDVYHK Unmodified 1271.6874 0.68738664 321 P05109 S100A8 Protein S100-A8;Protein S100-A8, N-terminally processed yes yes 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching 1 1 74.817 70.807 3 0.014749 10146 Miao_Sh-c_proteinG_mass3_141226_02 58.274 26.78 0 0 0 0 0 0 0 0 0 0 0 0 0 198 321 195 1695;1696 1733;1734 1733 2 ALQAEQGKSDMERK Oxidation (M);QQTGG (K) 2076.9858 0.98582986 30 O14645;B4DHN6 DNALI1 Axonemal dynein light intermediate polypeptide 1 yes no 0 0 1 1 2 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 85.219 71.635 3 0.024213 24772 Miao_Sh-c_proteinG_mass3_141226_03 44.312 29.15 0 0 0 0 0 0 0 0 0 0 0 0 0 199 30 196 1697 1735 1735 6 1 ALQFLEEVK Unmodified 1075.5914 0.59136099 444 P40227;B4DPJ8;P40227-2 CCT6A T-complex protein 1 subunit zeta yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 1 2 2 75.087 74.861 2 0.0019186 12510 Miao_Sh-c_Flag_mass3_141226_01 96.665 39.944 25876 0 0 554.67 0 3061.8 0 4718.8 8090.6 4169.4 1172.4 4108.5 0 200 444 197 1698;1699;1700;1701;1702;1703;1704;1705;1706;1707;1708;1709 1736;1737;1738;1739;1740;1741;1742;1743;1744 1736 9 ALQNAVTTFVNR Unmodified 1332.715 0.71499837 270 O14964;O14964-2 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 67.45 66.347 2 0.0011078 12154 Miao_Sh-H9_Flag_mass3_141226_02 79.492 44.8 0 0 0 0 0 0 0 0 0 0 0 0 0 201 270 198 1710 1745 1745 1 ALQPLEEGEDEEK Unmodified 1485.6835 0.68348305 573 Q14764 MVP Major vault protein yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 3 2 1 1 2 1 2 46.068 48.477 2;3 9.3144E-25 11028 Miao_Sh-H9_proteinG_mass3_141226_03 164.56 129.81 262160 0 0 354.42 3846.8 4513.4 55170 248.39 0 250.85 92675 54968 50136 202 573 199 1711;1712;1713;1714;1715;1716;1717;1718;1719;1720;1721;1722;1723;1724;1725 1746;1747;1748;1749;1750;1751;1752;1753;1754;1755;1756;1757;1758;1759;1760;1761;1762;1763;1764;1765;1766;1767;1768;1769;1770;1771;1772;1773;1774;1775;1776;1777 1766 32 ALQSVGQIVGEVLK Unmodified 1439.8348 0.83477916 508 P62333;H0YJC0;H0YJE9;H0YJT1 PSMC6 26S protease regulatory subunit 10B yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 96.326 96.075 2 0.027466 22599 Miao_Sh-H9_Flag_mass3_141226_03 46.249 30.308 0 0 0 0 0 0 0 0 0 0 0 0 0 203 508 200 1726 1778 1778 1 ALRELALPGCTSRMLK Oxidation (M);GlyGly (K) 1945.0237 0.02373569 216 Q6ZRI6;H3BMJ2;Q6ZRI6-2 C15orf39 Uncharacterized protein C15orf39 yes no 0 1 1 0 2 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 99.398 87.217 2 0.0022624 30821 Miao_Sh-H9_proteinG_mass3_141226_01 58.814 7.6795 0 0 0 0 0 0 0 0 0 0 0 0 0 204 216 201 1727 1779 1779 26 1 ALTGHLEEVVLALLK Unmodified 1604.9501 0.95014327 313 P04083;Q5T3N1;Q5T3N0 ANXA1 Annexin A1;Annexin yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching 2 1 1 3 1 108.9 110.44 3 1.3828E-05 27608 Miao_Sh-H9_Flag_mass3_141226_02 82.529 72.458 8668.6 0 2057.7 2512.4 1423.2 213.62 0 0 2461.7 0 0 0 0 205 313 202 1728;1729;1730;1731;1732;1733;1734;1735 1780;1781;1782;1783;1784;1785;1786 1786 7 ALTSEIALLQSR Unmodified 1300.7351 0.73506511 318 P04843;B7Z4L4 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 72.275 70.37 2 0.0039735 13676 Miao_Sh-c_Flag_mass3_141226_02 69.345 45.972 0 0 0 0 0 0 0 0 0 0 0 0 0 206 318 203 1736;1737 1787;1788 1787 2 ALTVPELTQQVFDAK Unmodified 1658.8879 0.88793694 338 P07437;Q5JP53;Q5ST81 TUBB Tubulin beta chain yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3 14 4 5 5 16 20 3 8 6 8 97.543 93.32 2;3 5.8584E-42 20679 Miao_Sh-H9_Flag_mass3_141226_02 165.78 117.6 262580 19296 25000 23527 42552 6685.1 25519 12956 6563.4 26846 21883 40475 11278 207 338 204 1738;1739;1740;1741;1742;1743;1744;1745;1746;1747;1748;1749;1750;1751;1752;1753;1754;1755;1756;1757;1758;1759;1760;1761;1762;1763;1764;1765;1766;1767;1768;1769;1770;1771;1772;1773;1774;1775;1776;1777;1778;1779;1780;1781;1782;1783;1784;1785;1786;1787;1788;1789;1790;1791;1792;1793;1794;1795;1796;1797;1798;1799;1800;1801;1802;1803;1804;1805;1806;1807;1808;1809;1810;1811;1812;1813;1814;1815;1816;1817;1818;1819;1820;1821;1822;1823;1824;1825;1826;1827;1828;1829;1830;1831;1832;1833;1834;1835;1836;1837 1789;1790;1791;1792;1793;1794;1795;1796;1797;1798;1799;1800;1801;1802;1803;1804;1805;1806;1807;1808;1809;1810;1811;1812;1813;1814;1815;1816;1817;1818;1819;1820;1821;1822;1823;1824;1825;1826;1827;1828;1829;1830;1831;1832;1833;1834;1835;1836;1837;1838;1839;1840;1841;1842;1843;1844;1845;1846;1847;1848;1849;1850;1851;1852;1853;1854;1855;1856;1857;1858;1859;1860;1861;1862;1863;1864;1865;1866;1867;1868;1869;1870;1871;1872;1873;1874;1875;1876;1877;1878;1879;1880;1881;1882;1883;1884;1885;1886;1887;1888;1889;1890;1891;1892;1893;1894;1895;1896;1897;1898;1899;1900;1901;1902;1903;1904;1905;1906;1907;1908;1909;1910;1911;1912;1913;1914;1915;1916;1917;1918;1919;1920;1921;1922;1923;1924;1925;1926;1927;1928;1929;1930;1931;1932;1933;1934;1935;1936;1937;1938;1939;1940;1941;1942;1943;1944;1945;1946;1947;1948;1949;1950;1951;1952;1953;1954;1955;1956;1957;1958;1959;1960;1961;1962;1963;1964;1965;1966;1967;1968;1969 1901 180 ALVAYYQK Unmodified 954.51747 0.51746776 259 P62249;M0R210;M0R3H0;M0QX76;M0R1M5 RPS16 40S ribosomal protein S16 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 2 1 1 1 1 1 45.59 47.84 2 1.4658E-05 11518 Miao_Sh-H9_proteinG_mass3_141226_01 148.33 58.958 23955 0 625.02 946.27 0 630.5 4740.2 0 293.86 0 5382.2 6609.6 4727.8 208 259 205 1838;1839;1840;1841;1842;1843;1844;1845;1846;1847 1970;1971;1972;1973;1974;1975;1976;1977;1978 1975 9 ALVDGPCTQVR Unmodified 1214.6078 0.60775611 126 P50914;E7EPB3 RPL14 60S ribosomal protein L14 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 2 43.764 46.249 2 0.0014253 10284 Miao_Sh-H9_proteinG_mass3_141226_03 108.7 82.579 10537 0 115.74 381.84 0 0 2583.4 0 0 0 3783.3 526.22 3146.8 209 126 206 1848;1849;1850;1851;1852;1853;1854 1979;1980;1981;1982 1981 4 ALVEFESNPEETREPGSPPSVQR Unmodified 2554.23 0.22995953 649 Q9H6F5;H0YG79 CCDC86 Coiled-coil domain-containing protein 86 yes no 0 0 0 0 1 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 59.239 60.392 3 0.011373 9461 Miao_Sh-c_proteinG_mass3_141226_01 35.992 31.512 0 0 0 0 0 0 0 0 0 0 0 0 0 210 649 207 1855 1983 1983 1 ALVQNDTLLQVK Unmodified 1340.7664 0.76636524 623 Q92522 H1FX Histone H1x yes yes 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 3 1 2 1 2 3 2 62.637 63.898 2;3 2.5285E-06 16123 Miao_Sh-c_proteinG_mass3_141226_03 132.14 87.28 51019 835.17 0 0 11957 1904.2 11666 1445.9 0 0 20116 150.8 2944.3 211 623 208 1856;1857;1858;1859;1860;1861;1862;1863;1864;1865;1866;1867;1868;1869;1870;1871 1984;1985;1986;1987;1988;1989;1990;1991;1992;1993;1994;1995;1996;1997;1998;1999;2000;2001;2002 1992 19 AMGIMNSFVNDIFER Unmodified 1742.812 0.81201158 37 Q93079;Q99879;Q99877;Q5QNW6;P58876;O60814;P62807;P57053;U3KQK0;B4DR52;Q5QNW6-2;Q99880 HIST1H2BH;HIST1H2BM;HIST1H2BN;HIST2H2BF;HIST1H2BD;HIST1H2BK;HIST1H2BC;H2BFS;HIST1H2BL Histone H2B type 1-H;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-C/E/F/G/I;Histone H2B type F-S;Histone H2B;Histone H2B type 1-L no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 105.07 105.45 2 8.1412E-07 25506 Miao_Sh-H9_Flag_mass3_141226_01 115.91 95.072 3763.4 0 654.17 0 1528.8 0 0 1580.4 0 0 0 0 0 212 37 209 1872;1873;1874 2003 2003 1 ANFTLPDVGDFLDEVLFIELQR Unmodified 2550.3006 0.30060528 643 Q9BUJ2;Q9BUJ2-2;B7Z4B8;Q9BUJ2-4;M0R3F1;Q9BUJ2-3 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching 1 1 122.54 123.2 3 0.0012815 32775 Miao_Sh-H9_Flag_mass3_141226_03 46.569 41.312 5108.6 0 0 0 0 0 0 0 0 5108.6 0 0 0 213 643 210 1875;1876 2004;2005 2004 2 ANGTTVHVGIHPSK Unmodified 1416.7474 0.74736113 238 P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;Q9UNX3;E5RIT6;J3KS10 RPL26;KRBA2;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 2 1 2 3 5 2 32.798 34.645 2;3;4 0.00015845 5977 Miao_Sh-c_proteinG_mass3_141226_03 78.69 52.989 23477 91.475 0 0 138.06 0 6163.8 0 0 0 7688 4430.1 4965.7 214 238 211 1877;1878;1879;1880;1881;1882;1883;1884;1885;1886;1887;1888;1889;1890;1891 2006;2007;2008;2009;2010;2011;2012;2013;2014;2015;2016;2017 2007 12 ANLPQSFQVDTSK Unmodified 1433.7151 0.71505795 392 P21333;Q5HY54;P21333-2 FLNA Filamin-A yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 1 2 53.2 57.127 2 0.003247 13647 Miao_Sh-c_proteinG_mass3_141226_03 67.997 36.4 0 0 0 0 0 0 0 0 0 0 0 0 0 215 392 212 1892;1893;1894 2018;2019;2020 2018 3 ANLQIDQINTDLNLER Unmodified 1868.9592 0.9592044 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 3 2 8 4 1 1 4 3 10 6 82.844 78.045 2;3 9.7581E-210 28359 Miao_Sh-H9_proteinG_mass3_141226_02 252.37 198.98 274500 10794 9723.3 16955 50690 963.1 0 17209 10429 9634.4 61831 36002 50274 216 433 213 1895;1896;1897;1898;1899;1900;1901;1902;1903;1904;1905;1906;1907;1908;1909;1910;1911;1912;1913;1914;1915;1916;1917;1918;1919;1920;1921;1922;1923;1924;1925;1926;1927;1928;1929;1930;1931;1932;1933;1934;1935;1936;1937;1938;1939;1940 2021;2022;2023;2024;2025;2026;2027;2028;2029;2030;2031;2032;2033;2034;2035;2036;2037;2038;2039;2040;2041;2042;2043;2044;2045;2046;2047;2048;2049;2050;2051;2052;2053;2054;2055;2056;2057;2058;2059;2060;2061;2062;2063;2064;2065;2066;2067;2068;2069;2070;2071;2072;2073;2074;2075;2076;2077;2078;2079;2080;2081;2082;2083;2084;2085;2086;2087;2088;2089;2090;2091;2092;2093;2094 2084 74 ANLSLLR Unmodified 785.47594 0.4759373 399 P23246;P23246-2 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 2 47.581 53.546 2 2.0241E-06 12255 Miao_Sh-c_proteinG_mass3_141226_03 132.57 20.751 0 0 0 0 0 0 0 0 0 0 0 0 0 217 399 214 1941;1942 2095;2096 2096 2 ANPFGGASHAK Unmodified 1055.5148 0.514842 502 P62266;D6RD47;D6RDJ2;D6RIX0;D6R9I7 RPS23 40S ribosomal protein S23 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 1 1 1 1 1 1 30.288 31.071 3 0.0018546 5958 Miao_Sh-H9_proteinG_mass3_141226_03 83.182 65.415 11146 249.87 277.61 234.27 0 0 2712.9 210.53 63.573 273.49 2270.5 3365.2 1487.7 218 502 215 1943;1944;1945;1946;1947;1948;1949;1950;1951;1952;1953 2097;2098;2099;2100;2101;2102;2103;2104;2105 2102 9 ANTFVAELK Unmodified 991.53385 0.53384611 195 P40926;G3XAL0 MDH2 Malate dehydrogenase, mitochondrial;Malate dehydrogenase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 54.639 57.146 2 0.0052615 14610 Miao_Sh-H9_proteinG_mass3_141226_02 85.533 55.367 1643.1 0 0 0 0 0 0 0 0 0 0 1643.1 0 219 195 216 1954 2106 2106 1 ANVAVVSGAPLQGQLVAR Unmodified 1748.9897 0.98971667 265 O00560;O00560-3 SDCBP Syntenin-1 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 3 1 67.015 68.18 2;3 1.1201E-14 11989 Miao_Sh-H9_Flag_mass3_141226_01 111.11 96.543 7301.2 0 1087.7 0 0 0 137.49 3119.9 2956.2 0 0 0 0 220 265 217 1955;1956;1957;1958;1959;1960;1961;1962 2107;2108;2109;2110;2111;2112;2113 2110 7 APFDLFENR Unmodified 1107.5349 0.53490874 341 P07900;P07900-2;Q86U12 HSP90AA1 Heat shock protein HSP 90-alpha yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 75.698 76.08 2 0.049292 14003 Miao_Sh-c_Flag_mass3_141226_02 55.064 42.537 0 0 0 0 0 0 0 0 0 0 0 0 0 221 341 218 1963 2114 2114 1 APGIIPR Unmodified 722.44391 0.44390889 410 P25705;P25705-2;P25705-3;K7EK77;K7ERX7;K7EJP1;K7ENJ4 ATP5A1 ATP synthase subunit alpha, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 41.423 42.96 2 0.034441 9436 Miao_Sh-H9_proteinG_mass3_141226_03 79.454 10.021 1987.3 0 0 0 0 0 0 183.92 0 0 0 987.29 816.1 222 410 219 1964;1965;1966 2115;2116 2116 2 APGLGAFR Unmodified 787.43407 0.43407249 533 P78527;E7EUY0;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 44.809 50.974 2 0.024246 11233 Miao_Sh-c_proteinG_mass3_141226_03 71.342 44.546 0 0 0 0 0 0 0 0 0 0 0 0 0 223 533 220 1967 2117 2117 1 APIIAVTR Unmodified 839.52289 0.52288749 368 P14618;P14618-2;P14618-3;H3BTN5;Q504U3 PKM;PKM2 Pyruvate kinase PKM;Pyruvate kinase yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 2 1 1 1 2 1 45.219 46.734 2 2.3035E-18 4904 Miao_Sh-c_Flag_mass3_141226_02 171.38 136.18 74852 4418.8 4126.3 3913.4 1717.8 1486 24098 0 4623.3 4935.4 25533 0 0 224 368 221 1968;1969;1970;1971;1972;1973;1974;1975;1976;1977;1978;1979;1980;1981 2118;2119;2120;2121;2122;2123;2124;2125;2126;2127;2128;2129;2130;2131;2132;2133;2134;2135;2136;2137;2138 2120 21 APILIATDVASR Unmodified 1225.703 0.7030367 34;79 P17844;J3KTA4;B4DLW8;Q92841;Q92841-3;C9JMU5;H3BLZ8;Q92841-1;Q92841-2 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 2 1 1 60.743 62.411 2 2.4838E-11 17053 Miao_Sh-H9_proteinG_mass3_141226_01 137.6 95.261 22042 2545.1 2108.2 2231.3 0 0 6467.5 0 536.64 0 0 4486.9 3666.8 225 34;79 222 1982;1983;1984;1985;1986;1987;1988;1989;1990;1991 2139;2140;2141;2142;2143;2144;2145;2146;2147;2148 2145 10 APIRPDIVNFVHTNLR Unmodified 1861.0323 0.032250187 438 P36578;H3BTP7;H3BU31 RPL4 60S ribosomal protein L4 yes no 0 0 0 0 1 By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 3 1 1 91.282 86.014 3;4 9.9243E-05 38212 Miao_Sh-H9_proteinG_mass3_141226_02 102.72 82.439 75786 0 2236.4 2650.2 16946 8788.2 5927.5 0 3005.3 0 17106 11287 7840.9 226 438 223 1992;1993;1994;1995;1996;1997;1998;1999;2000;2001;2002 2149;2150;2151;2152;2153;2154;2155;2156;2157;2158 2156 10 APNTPASGANGDGSMSQTQSGSTVK Oxidation (M) 2365.0452 0.045195231 106 CON__P15636 yes yes 0 0 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 3 1 1 2 1 2 4 2 8 2 31.417 32.105 2;3 1.1508E-128 6006 Miao_Sh-H9_proteinG_mass3_141226_03 210.91 196.25 67665 1809.5 1910.3 2455.8 0 0 0 1963.6 0 2108.6 19094 19019 19303 + 227 106 224 2003;2004;2005;2006;2007;2008;2009;2010;2011;2012;2013;2014;2015;2016;2017;2018;2019;2020;2021;2022;2023;2024;2025;2026;2027;2028 2159;2160;2161;2162;2163;2164;2165;2166;2167;2168;2169;2170;2171;2172;2173;2174;2175;2176;2177;2178;2179;2180;2181;2182;2183;2184;2185;2186;2187;2188;2189;2190;2191;2192;2193;2194;2195;2196;2197;2198;2199;2200;2201;2202;2203;2204;2205;2206;2207;2208;2209;2210;2211;2212;2213;2214;2215;2216;2217;2218 2207 13 60 APNTPASGANGDGSMSQTQSGSTVK Unmodified 2349.0503 0.050280609 106 CON__P15636 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 3 1 1 1 1 2 1 1 37.168 37.375 3 6.4949E-18 3679 Miao_Sh-H9_Flag_mass3_141226_03 89.882 77.518 6632.3 700.6 785.24 490.94 455.18 0 0 1460.9 94.345 1577.7 1067.5 0 0 + 228 106 224 2029;2030;2031;2032;2033;2034;2035;2036;2037;2038;2039;2040 2219;2220;2221;2222;2223;2224;2225;2226;2227;2228;2229 2227 11 APPQTHLPSGASSGTGSASATHGGGSPPGTR Unmodified 2784.3175 0.31754576 456 P46379;P46379-2;P46379-3;P46379-4;P46379-5;F6S6P2;X6REW1;F6UR09;F6U1F2;F6XTU0;F6RG75;X6RCT4;F6WML8;F6VEM6;F6X9W3;F6U341;F6TC96 BAG6 Large proline-rich protein BAG6 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 39.385 38.883 4 0.00061589 3860 Miao_Sh-H9_Flag_mass3_141226_02 32.822 29.018 736.26 186.49 0 0 0 0 0 0 549.77 0 0 0 0 229 456 225 2041;2042 2230 2230 1 APQETYADIGGLDNQIQEIK Unmodified 2202.0804 0.080441751 39 P62191;B4DR63;G3V4X1 PSMC1 26S protease regulatory subunit 4 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 2 1 2 1 79.445 77.497 3 1.512E-68 15866 Miao_Sh-H9_Flag_mass3_141226_01 175.52 152.06 0 0 0 0 0 0 0 0 0 0 0 0 0 230 39 226 2043;2044;2045;2046;2047;2048;2049 2231;2232;2233;2234;2235;2236;2237 2232 7 APQQQPPPQQPPPPQPPPQQPPPPPSYSPAR Unmodified 3327.6789 0.67889422 643 Q9BUJ2;Q9BUJ2-2;B7Z4B8;Q9BUJ2-4;M0R3F1;Q9BUJ2-3;Q9BUJ2-5 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 9 9 52.156 54.481 3;4 6.1665E-39 7269 Miao_Sh-c_proteinG_mass3_141226_01 101.87 97.207 46581 0 0 0 7667.6 8913.3 0 0 0 0 10305 10372 9322.5 231 643 227 2050;2051;2052;2053;2054;2055;2056;2057;2058;2059;2060;2061;2062;2063;2064;2065;2066;2067;2068;2069;2070 2238;2239;2240;2241;2242;2243;2244;2245;2246;2247;2248;2249;2250;2251;2252;2253;2254;2255;2256;2257;2258;2259;2260;2261;2262;2263;2264;2265;2266;2267;2268;2269;2270;2271;2272;2273;2274 2239 37 APSIIFIDELDAIGTK Unmodified 1701.9189 0.91890272 684 R4GNH3;P17980;E9PKD5;E9PM69;E9PMD8;E9PN50 PSMC3 26S protease regulatory subunit 6A yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 104.26 100.08 2;3 8.9666E-09 21926 Miao_Sh-c_Flag_mass3_141226_03 94.973 74.59 8926.6 0 0 0 0 0 0 0 3603.2 3833.7 1489.8 0 0 232 684 228 2071;2072;2073;2074 2275;2276 2275 2 APSTYGGGLSVSSR Unmodified 1337.6575 0.65754307 102 P08779;CON__P08779 KRT16 Keratin, type I cytoskeletal 16 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 3 1 1 1 4 42.86 45.679 2 9.6835E-10 11369 Miao_Sh-H9_proteinG_mass3_141226_01 132.95 105.95 12984 0 0 0 0 0 5254.6 55.9 0 0 0 4579.9 3093.6 + 233 102 229 2075;2076;2077;2078;2079;2080;2081;2082;2083;2084 2277;2278;2279;2280;2281;2282;2283;2284;2285;2286 2280 10 APSTYGGGLSVSSSR Unmodified 1424.6896 0.68957148 97 P02533;CON__P02533 KRT14 Keratin, type I cytoskeletal 14 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 3 2 3 3 42.838 46.118 2 3.0829E-67 10798 Miao_Sh-H9_proteinG_mass3_141226_02 190.41 151.53 32968 0 0 0 80.222 235.41 9814.9 0 0 0 13539 9297.9 0 + 234 97 230 2085;2086;2087;2088;2089;2090;2091;2092;2093;2094;2095;2096;2097 2287;2288;2289;2290;2291;2292;2293;2294;2295;2296 2292 10 APVPTGEVYFADSFDR Unmodified 1769.8261 0.82606496 29 P27824;B4DGP8;H0Y9Q7;D6RHJ3;D6RD16;D6RAQ8;D6RAU8;D6RB85;D6RDP7 CANX Calnexin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 79.9 79.75 2 0.00053182 16929 Miao_Sh-H9_Flag_mass3_141226_03 68.576 59.294 0 0 0 0 0 0 0 0 0 0 0 0 0 235 29 231 2098 2297 2297 1 APVQPQQSPAAAPGGTDEK Unmodified 1847.9014 0.90135517 559 Q13200;C9JPC0;F8WBS8 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 1 36.779 38.168 3 0.021969 3562 Miao_Sh-H9_Flag_mass3_141226_03 35.044 24.183 2376 0 193.81 197.21 0 0 550.47 274.31 0 317.56 571.3 0 271.34 236 559 232 2099;2100;2101;2102;2103;2104;2105 2298 2298 1 APVQPQQSPAAAPGGTDEKPSGK Unmodified 2217.1026 0.10257418 559 Q13200;C9JPC0;F8WBS8 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 1 1 32.432 36.442 3 0.004974 6556 Miao_Sh-c_proteinG_mass3_141226_03 38.267 28.576 0 0 0 0 0 0 0 0 0 0 0 0 0 237 559 233 2106;2107 2299;2300 2299 2 AQAAAPASVPAQAPK Unmodified 1376.7412 0.74121312 461 P47914 RPL29 60S ribosomal protein L29 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 8 3 3 2 3 2 3 2 2 36.893 38.844 2;3 9.4647E-62 8651 Miao_Sh-H9_proteinG_mass3_141226_01 189.47 173.92 292310 2069 2993.8 3274.6 3107 3327.7 75043 22.357 3302.6 0 71165 69300 58703 238 461 234 2108;2109;2110;2111;2112;2113;2114;2115;2116;2117;2118;2119;2120;2121;2122;2123;2124;2125;2126;2127;2128;2129;2130;2131;2132;2133;2134;2135;2136;2137 2301;2302;2303;2304;2305;2306;2307;2308;2309;2310;2311;2312;2313;2314;2315;2316;2317;2318;2319;2320;2321;2322;2323;2324;2325;2326;2327;2328;2329;2330;2331;2332;2333;2334;2335;2336;2337;2338;2339;2340;2341;2342;2343;2344;2345;2346;2347;2348;2349;2350;2351;2352;2353;2354;2355;2356;2357;2358;2359 2341 58 AQAALAVNISAAR Unmodified 1254.7044 0.70443369 444 P40227;P40227-2 CCT6A T-complex protein 1 subunit zeta yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 63.795 60.85 2 0.0035592 22441 Miao_Sh-H9_proteinG_mass3_141226_03 69.345 57.777 3701.4 0 353.25 0 0 0 1172.6 0 1049 0 0 0 1126.6 239 444 235 2138;2139;2140;2141;2142;2143 2360;2361;2362 2362 3 AQALAIETEAELQR Unmodified 1541.8049 0.80493559 573 Q14764 MVP Major vault protein yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 5 5 10 1 1 12 5 20 67.811 65.254 2;3 4.1535E-191 22344 Miao_Sh-H9_proteinG_mass3_141226_01 261.79 212.35 310450 283.77 0 0 36952 24249 36431 449.01 0 2319.9 105730 58925 45108 240 573 236 2144;2145;2146;2147;2148;2149;2150;2151;2152;2153;2154;2155;2156;2157;2158;2159;2160;2161;2162;2163;2164;2165;2166;2167;2168;2169;2170;2171;2172;2173;2174;2175;2176;2177;2178;2179;2180;2181;2182;2183;2184;2185;2186;2187;2188;2189;2190;2191;2192;2193;2194;2195;2196;2197;2198;2199;2200;2201;2202;2203 2363;2364;2365;2366;2367;2368;2369;2370;2371;2372;2373;2374;2375;2376;2377;2378;2379;2380;2381;2382;2383;2384;2385;2386;2387;2388;2389;2390;2391;2392;2393;2394;2395;2396;2397;2398;2399;2400;2401;2402;2403;2404;2405;2406;2407;2408;2409;2410;2411;2412;2413;2414;2415;2416;2417;2418;2419;2420;2421;2422;2423;2424;2425;2426;2427;2428;2429;2430;2431;2432;2433 2389 71 AQDEAFALQDVPLSSVVR Unmodified 1943.9953 0.99525556 679 Q9Y3B7;Q9Y3B7-2;Q9Y3B7-3;H0YCD5 MRPL11 39S ribosomal protein L11, mitochondrial yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 95.791 91.981 2;3 0.0017877 32689 Miao_Sh-H9_proteinG_mass3_141226_02 52.432 44.187 0 0 0 0 0 0 0 0 0 0 0 0 0 241 679 237 2204;2205 2434;2435 2435 2 AQDEIPALSVSRPQTGLSFLGPEPEDLEDLYSR Unmodified 3628.7897 0.78968604 453 P43686;P43686-2 PSMC4 26S protease regulatory subunit 6B yes no 0 0 0 0 1 By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 100.21 100.21 3;4 5.1837E-11 21629 Miao_Sh-c_Flag_mass3_141226_01 47.59 43.225 5520.6 5520.6 0 0 0 0 0 0 0 0 0 0 0 242 453 238 2206;2207 2436;2437 2436 1 AQEGGGSEVFQELK Unmodified 1477.7049 0.7048872 612 Q8NCA5;Q8NCA5-2;E9PH82 FAM98A Protein FAM98A yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 58.655 60.811 2 0.00013652 9562 Miao_Sh-H9_Flag_mass3_141226_01 81.185 55.272 8034.1 770.91 0 0 0 0 5990 0 0 0 585.48 687.78 0 243 612 239 2208;2209;2210;2211;2212;2213 2438;2439;2440 2439 3 AQFEGIVTDLIR Unmodified 1360.7351 0.73506511 441 P38646;H0YBG6 HSPA9 Stress-70 protein, mitochondrial yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 2 2 1 1 2 3 7 98.027 93.753 2;3 1.1343E-116 35169 Miao_Sh-H9_proteinG_mass3_141226_01 231.32 189.16 818120 10776 10894 1124.5 28984 126870 137420 15179 17633 21706 191160 130920 125450 244 441 240 2214;2215;2216;2217;2218;2219;2220;2221;2222;2223;2224;2225;2226;2227;2228;2229;2230;2231;2232;2233;2234;2235;2236;2237;2238;2239 2441;2442;2443;2444;2445;2446;2447;2448;2449;2450;2451;2452;2453;2454;2455;2456;2457;2458;2459;2460;2461;2462;2463;2464;2465;2466;2467;2468;2469;2470;2471;2472;2473;2474;2475;2476;2477;2478;2479;2480;2481;2482;2483;2484;2485;2486;2487;2488;2489;2490;2491;2492;2493;2494;2495;2496;2497;2498;2499;2500;2501;2502;2503;2504;2505;2506;2507;2508;2509;2510;2511;2512;2513;2514;2515;2516;2517;2518;2519;2520;2521 2475 81 AQFVPLPVSVSVEFAVAATDCIAK Unmodified 2518.3141 0.31414686 103 CON__P12763 yes yes 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 2 1 2 1 117.55 117.97 3 5.5123E-17 28510 Miao_Sh-c_Flag_mass3_141226_02 85.777 78.129 20043 0 7559.7 0 3820 0 0 0 0 8663.7 0 0 0 + 245 103 241 2240;2241;2242;2243;2244;2245;2246 2522;2523;2524;2525;2526;2527;2528;2529 2523 7 AQIFANTVDNAR Unmodified 1318.663 0.6629628 178 P05783;F8VZY9 KRT18 Keratin, type I cytoskeletal 18 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 48.641 49.82 2 1.1546E-15 12634 Miao_Sh-H9_proteinG_mass3_141226_02 156.36 102.21 10565 123.01 780.94 0 0 0 3206.7 266.79 80.787 0 2691.7 3415.5 0 246 178 242 2247;2248;2249;2250;2251;2252;2253;2254 2530;2531;2532;2533;2534;2535 2534 6 AQIHDLVLVGGSTR Unmodified 1464.8049 0.80487601 343 P08107;P08107-2;E7EP94;V9GZ37 HSPA1A Heat shock 70 kDa protein 1A/1B yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 57.805 57.922 3 0.022946 8319 Miao_Sh-c_proteinG_mass3_141226_01 42.682 30.624 6390.9 683.49 0 0 1228.4 0 0 0 4479 0 0 0 0 247 343 243 2255;2256;2257;2258;2259 2536;2537;2538 2538 3 AQILPIR Acetyl (Protein N-term) 851.52289 0.52288749 535 Q00610;Q00610-2;J3KS13;J3QL20;J3KSQ2 CLTC Clathrin heavy chain 1 yes no 1 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 77.517 74.372 2 0.003043 15164 Miao_Sh-H9_Flag_mass3_141226_02 110.61 70.343 5929.9 0 1344.8 0 0 0 0 0 2359.2 1780.9 444.95 0 0 248 535 244 2260;2261;2262;2263;2264;2265 2539;2540;2541;2542;2543;2544 2542 6 AQLELEVSK Unmodified 1015.555 0.55497548 573 Q14764 MVP Major vault protein yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 1 1 49.522 52.135 2 0.0017233 11080 Miao_Sh-c_proteinG_mass3_141226_03 114.89 80.805 187390 313.14 0 0 468.01 145.75 27093 0 0 0 45285 38078 76004 249 573 245 2266;2267;2268;2269;2270;2271;2272 2545;2546;2547 2545 3 AQLFALTGVQPAR Unmodified 1370.767 0.76703394 6 P54578;A6NJA2;B7Z4N8;P54578-2;J3QQT6;J3KS55 USP14 Ubiquitin carboxyl-terminal hydrolase 14;Ubiquitin carboxyl-terminal hydrolase yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 2 1 2 71.673 72.475 2 1.2841E-08 12551 Miao_Sh-c_Flag_mass3_141226_01 126.1 92.337 11414 0 0 2438.8 0 908.73 0 0 6377.8 0 1688.7 0 0 250 6 246 2273;2274;2275;2276;2277;2278;2279;2280;2281;2282;2283 2548;2549;2550;2551;2552;2553;2554;2555;2556;2557;2558 2548 11 AQLGVQAFADALLIIPK Unmodified 1767.0295 0.02945622 444 P40227;B4DPJ8;P40227-2 CCT6A T-complex protein 1 subunit zeta yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 2 4 2 2 2 113.84 114.44 2;3 7.6378E-07 29498 Miao_Sh-c_proteinG_mass3_141226_01 107.82 96.726 30284 1694.8 3799.4 0 9627.1 0 0 4771.7 5688.7 4702.5 0 0 0 251 444 247 2284;2285;2286;2287;2288;2289;2290;2291;2292;2293;2294;2295;2296 2559;2560;2561;2562;2563;2564;2565;2566;2567;2568;2569;2570;2571;2572 2565 14 AQLVVIAHDVDPIELVVFLPALCR Unmodified 2686.488 0.4880289 509 P62424;Q5T8U2 RPL7A 60S ribosomal protein L7a yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 114.11 115.73 3;4 1.0561E-10 30078 Miao_Sh-c_proteinG_mass3_141226_01 71.696 63.669 16100 1282.6 0 0 0 7110.7 0 0 7706.3 0 0 0 0 252 509 248 2297;2298;2299;2300 2573;2574;2575 2573 1 AQNDLIWNIK Unmodified 1213.6455 0.64552182 349 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 70.91 72.263 2 0.048497 13878 Miao_Sh-c_proteinG_mass3_141226_01 50.108 25.332 0 0 0 0 0 0 0 0 0 0 0 0 0 253 349 249 2301 2576 2576 1 AQQAADK Acetyl (Protein N-term) 772.37153 0.37153181 433 P35579;Q5BKV1;B1AH99 MYH9 Myosin-9 yes no 1 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 26.29 26.842 2 0.049878 5625 Miao_Sh-H9_proteinG_mass3_141226_01 49.423 33.269 0 0 0 0 0 0 0 0 0 0 0 0 0 254 433 250 2302 2577 2577 1 AQQLAEVEVK Unmodified 1113.603 0.60298831 573 Q14764 MVP Major vault protein yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 2 2 3 1 3 43.278 44.74 2;3 8.3414E-14 10477 Miao_Sh-H9_proteinG_mass3_141226_02 154.66 120.28 276070 266.34 121.44 0 3968.8 1740.2 0 314.21 0 0 41350 29716 198600 255 573 251 2303;2304;2305;2306;2307;2308;2309;2310;2311;2312;2313;2314;2315;2316 2578;2579;2580;2581;2582;2583;2584;2585;2586;2587 2582 10 AQVIYTR Unmodified 849.47085 0.47085192 515 P62851 RPS25 40S ribosomal protein S25 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 2 1 1 34.68 35.933 2 0.0071963 3291 Miao_Sh-c_Flag_mass3_141226_03 110.81 90.182 9506.4 1299.4 1264 1150.5 0 941.65 0 0 0 1201.5 0 0 3649.4 256 515 252 2317;2318;2319;2320;2321;2322;2323;2324;2325;2326 2588;2589;2590;2591;2592;2593;2594;2595;2596 2591 9 AQYDELAR Unmodified 964.46141 0.46140945 178 P05783;F8VZY9 KRT18 Keratin, type I cytoskeletal 18 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 41.022 41.849 2 0.055334 9129 Miao_Sh-H9_proteinG_mass3_141226_02 62.969 11.903 1411 0 0 0 0 0 0 289.11 0 0 0 1121.8 0 257 178 253 2327;2328 2597 2597 1 AQYEDIAQK Unmodified 1064.5138 0.51383895 314 P04264 KRT1 Keratin, type II cytoskeletal 1 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 1 35.913 37.761 2 0.0021838 3668 Miao_Sh-c_proteinG_mass3_141226_01 106.2 69.804 26987 50.859 0 303.78 1032 1003.1 8043.1 0 0 35.832 9546.1 6972.6 0 + 258 314 254 2329;2330;2331;2332;2333;2334;2335;2336 2598;2599;2600;2601;2602;2603;2604;2605 2599 8 AQYEEIANR Unmodified 1092.52 0.51998696 105 P13647;CON__P13647;H0YI76;H0YIN9 KRT5 Keratin, type II cytoskeletal 5 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 37.887 38.739 2 2.7881E-08 7673 Miao_Sh-c_proteinG_mass3_141226_03 131.5 57.039 5559.3 0 0 0 37.193 0 0 0 213.69 0 2534.8 2773.6 0 + 259 105 255 2337;2338;2339;2340;2341 2606;2607 2606 2 AQYEEIAQR Unmodified 1106.5356 0.53563702 98;108 P02538;CON__P02538;P48668;CON__P04259;CON__P48668;Q01546;P19013;F5H8K9;CON__P19013;P35908;CON__P35908 KRT6A;KRT6C;KRT76;KRT4;KRT2 Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 4;Keratin, type II cytoskeletal 2 epidermal no no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 1 38.603 41.124 2 4.0863E-25 8585 Miao_Sh-H9_proteinG_mass3_141226_02 159.34 114.96 15715 0 83.685 0 250.58 138.75 4874.9 0 0 0 4774.8 1271 4321 + 260 98;108 256 2342;2343;2344;2345;2346;2347;2348;2349 2608;2609;2610;2611;2612;2613 2611 6 ARFEELNADLFR Unmodified 1479.747 0.74702678 356 P11142;E9PKE3;P11142-2;E9PNE6;A8K7Q2;E9PN89;P54652 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 0 0 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 3 3 1 4 1 3 4 89.224 85.18 2;3 2.6997E-54 36822 Miao_Sh-H9_proteinG_mass3_141226_02 193.62 151.2 128670 0 0 0 3872.5 14540 24359 23613 11902 13041 13404 12007 11931 261 356 257 2350;2351;2352;2353;2354;2355;2356;2357;2358;2359;2360;2361;2362;2363;2364;2365;2366;2367;2368;2369;2370;2371;2372;2373;2374 2614;2615;2616;2617;2618;2619;2620;2621;2622;2623;2624;2625;2626;2627;2628;2629;2630;2631;2632;2633;2634;2635;2636;2637;2638;2639;2640;2641;2642;2643;2644;2645;2646;2647;2648;2649;2650;2651;2652;2653 2642 39 ASAEGPLLGPEAAPSGEGAGSK Unmodified 1951.9487 0.9486993 82 Q9BRJ6;C9JQV0 C7orf50 Uncharacterized protein C7orf50 yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 1 52.681 54.673 3 1.149E-10 7144 Miao_Sh-c_proteinG_mass3_141226_01 81.017 58.161 13013 311.16 0 511.18 2618.7 2550 4027.1 0 2994.7 0 0 0 0 262 82 258 2375;2376;2377;2378;2379;2380;2381 2654;2655;2656;2657;2658;2659;2660 2656 7 ASEGPAFFPGR Unmodified 1134.5458 0.54580778 653 Q9NSD9;F5H6Y1 FARSB Phenylalanine--tRNA ligase beta subunit yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 2 1 1 1 1 1 1 56.056 58.362 2 0.009156 9433 Miao_Sh-H9_Flag_mass3_141226_02 67.334 51.704 5165.5 0 0 0 0 0 926.89 1270.6 0 0 542.31 910.76 1514.9 263 653 259 2382;2383;2384;2385;2386;2387;2388;2389 2661;2662;2663;2664 2662 4 ASGADSKGDDLSTAILK Acetyl (Protein N-term) 1689.8421 0.84210896 483 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 1 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 62.222 63.876 3 0.0073703 10965 Miao_Sh-H9_Flag_mass3_141226_02 42.947 28.535 4459.1 0 0 748.99 0 0 492.94 0 2817.6 0 399.56 0 0 264 483 260 2390;2391;2392;2393 2665 2665 1 ASGNYATVISHNPETK Unmodified 1687.8166 0.81656291 521 P62917;E9PKZ0;G3V1A1 RPL8 60S ribosomal protein L8 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 1 1 2 2 2 4 2 47.329 47.601 2;3 8.826E-50 10596 Miao_Sh-H9_proteinG_mass3_141226_02 179.92 154.74 163000 4168.9 1853.3 2212 41.531 0 0 5690.9 13968 8151.3 8040.9 66735 52140 265 521 261 2394;2395;2396;2397;2398;2399;2400;2401;2402;2403;2404;2405;2406;2407;2408;2409;2410;2411;2412 2666;2667;2668;2669;2670;2671;2672;2673;2674;2675;2676;2677;2678;2679;2680;2681;2682;2683;2684;2685;2686;2687;2688;2689;2690 2683 25 ASGNYATVISHNPETKK Unmodified 1815.9115 0.91152593 521 P62917;E9PKZ0;G3V1A1 RPL8 60S ribosomal protein L8 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 3 1 1 3 3 40.333 41.741 3;4 0.00318 9111 Miao_Sh-H9_proteinG_mass3_141226_01 47.68 34.672 10811 272.33 0 0 0 0 0 0 0 718.85 2398.6 3823.7 3597.4 266 521 262 2413;2414;2415;2416;2417;2418;2419;2420;2421;2422;2423 2691;2692;2693;2694 2691 4 ASGPPVSELITK Unmodified 1197.6605 0.66050319 378;352;379 P16402;P10412;P16403 HIST1H1D;HIST1H1E;HIST1H1C Histone H1.3;Histone H1.4;Histone H1.2 no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 1 2 1 1 3 1 1 2 1 1 59.063 58.987 2;3 2.4962E-22 14822 Miao_Sh-H9_proteinG_mass3_141226_03 161.23 130.19 914260 22157 23351 22207 45726 48818 47.73 53031 59629 59427 215140 205260 159470 267 378;352;379 263 2424;2425;2426;2427;2428;2429;2430;2431;2432;2433;2434;2435;2436;2437;2438;2439;2440;2441;2442 2695;2696;2697;2698;2699;2700;2701;2702;2703;2704;2705;2706;2707;2708;2709;2710;2711;2712;2713;2714;2715;2716;2717;2718;2719;2720;2721;2722;2723;2724;2725;2726;2727;2728;2729;2730;2731;2732;2733;2734;2735;2736;2737;2738;2739;2740;2741;2742;2743;2744;2745;2746;2747;2748;2749;2750;2751;2752 2750 58 ASGVAVSDGVIK Acetyl (Protein N-term) 1143.6136 0.61355299 404 P23528;E9PP50;E9PS23 CFL1 Cofilin-1 yes no 1 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching 1 2 1 2 2 2 1 1 61.485 60.206 2 2.7116E-06 14599 Miao_Sh-c_proteinG_mass3_141226_03 130.69 80.97 67271 4565.9 0 0 0 1609.3 16266 12785 0 16245 489.26 0 15311 268 404 264 2443;2444;2445;2446;2447;2448;2449;2450;2451;2452;2453;2454 2753;2754;2755;2756;2757;2758 2757 6 ASHEEVEGLVEK Unmodified 1325.6463 0.64630969 549 Q08380 LGALS3BP Galectin-3-binding protein yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 42.794 44.949 3 0.0018407 9183 Miao_Sh-H9_proteinG_mass3_141226_03 73.435 53.776 1455.8 0 0 0 0 180.71 0 204.1 0 0 0 0 1071 269 549 265 2455;2456;2457 2759 2759 1 ASIHEAWTDGK Unmodified 1213.5728 0.57275081 283;362 O43707;O43707-2;P12814;P12814-2;P12814-3;P12814-4;H9KV75 ACTN4;ACTN1 Alpha-actinin-4;Alpha-actinin-1 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 2 1 1 2 1 1 1 1 1 1 40.329 42.112 3 0.00060944 9285 Miao_Sh-H9_proteinG_mass3_141226_02 98.898 68.335 12297 234.09 0 135.39 179.36 298.31 3102.5 284.86 233.5 0 3331.1 2487 2011.5 270 283;362 266 2458;2459;2460;2461;2462;2463;2464;2465;2466;2467;2468;2469 2760;2761;2762;2763;2764;2765 2763 6 ASITALEAK Unmodified 902.5073 0.50729701 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 2 1 1 1 1 1 1 1 1 2 44.054 45.85 2 2.7982E-51 10189 Miao_Sh-H9_proteinG_mass3_141226_03 204.86 58.589 146690 1659.5 134.2 284.06 1745.3 1350.9 30470 265.73 1933.6 0 41462 32448 34934 271 433 267 2470;2471;2472;2473;2474;2475;2476;2477;2478;2479;2480;2481;2482 2766;2767;2768;2769;2770;2771;2772;2773;2774;2775;2776;2777;2778;2779;2780;2781 2781 16 ASITPGTILIILTGR Unmodified 1524.9239 0.92392852 542 Q02878;F8VZ45;U3KQR5;F8VR69 RPL6 60S ribosomal protein L6 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS 2 2 1 3 4 1 4 2 2 111.23 109.22 2;3 3.2808E-62 29470 Miao_Sh-c_proteinG_mass3_141226_02 190.06 177.05 134020 7720.7 13422 6025.4 33704 11093 793.25 6676.2 20628 0 0 0 33957 272 542 268 2483;2484;2485;2486;2487;2488;2489;2490;2491;2492;2493;2494;2495;2496;2497;2498;2499;2500;2501;2502;2503 2782;2783;2784;2785;2786;2787;2788;2789;2790;2791;2792;2793;2794;2795;2796;2797;2798;2799;2800;2801;2802;2803;2804;2805;2806;2807;2808;2809;2810;2811;2812;2813;2814;2815;2816;2817;2818;2819;2820;2821;2822;2823;2824;2825;2826;2827;2828;2829;2830;2831;2832;2833;2834;2835;2836;2837;2838;2839;2840;2841;2842 2814 61 ASLDRPFTNLESAFYSIVGLSSLGAQVPDAK Unmodified 3252.6667 0.66665778 319 P04844;P04844-2;Q5JYR7 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 116.52 116.59 3 1.6703E-08 28737 Miao_Sh-H9_Flag_mass3_141226_01 56.22 46.84 0 0 0 0 0 0 0 0 0 0 0 0 0 273 319 269 2504;2505 2843;2844 2843 2 ASLEAAIADAEQR Unmodified 1343.6681 0.66810776 100 P05787;CON__P05787;P05787-2;CON__H-INV:HIT000292931 KRT8 Keratin, type II cytoskeletal 8 yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 2 1 1 1 68.193 69.975 2;3 2.0017E-06 19434 Miao_Sh-H9_proteinG_mass3_141226_03 124.12 95.422 22761 0 0 0 1959.3 1752.6 2457.5 4526.3 0 4217.8 3361.2 2297 2189 + 274 100 270 2506;2507;2508;2509;2510;2511;2512;2513;2514;2515;2516 2845;2846;2847;2848;2849;2850;2851;2852;2853;2854;2855;2856 2855 12 ASLEGNLAETENR Unmodified 1402.6688 0.66883604 109 Q04695;CON__Q04695;F5GWP8 KRT17 Keratin, type I cytoskeletal 17 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 48.457 49.309 2 7.7756E-05 12177 Miao_Sh-H9_proteinG_mass3_141226_01 105.58 78.028 0 0 0 0 0 0 0 0 0 0 0 0 0 + 275 109 271 2517 2857 2857 1 ASLENSLEETK Unmodified 1219.5932 0.59321148 97;102 P02533;CON__P02533;CON__Q9Z2K1;CON__Q3ZAW8;P08779;CON__P08779;K7ENW6 KRT14;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 1 1 3 3 1 47.368 48.671 2 5.4782E-58 12323 Miao_Sh-H9_proteinG_mass3_141226_01 190.35 148.14 16308 225.93 0 414.12 0 0 0 0 0 0 621.17 0 15047 + 276 97;102 272 2518;2519;2520;2521;2522;2523;2524;2525;2526 2858;2859;2860;2861;2862;2863;2864 2862 7 ASLSLAPVNIFK Acetyl (Protein N-term) 1300.7391 0.73908786 159 P78371;F8VQ14;F5GWF6 CCT2 T-complex protein 1 subunit beta yes no 1 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 2 1 2 107.66 100.44 2 0.0033193 22292 Miao_Sh-c_Flag_mass3_141226_01 64.224 41.106 6848.5 0 0 0 1381.9 0 0 2112.7 0 0 1860.5 0 1493.3 277 159 273 2527;2528;2529;2530;2531;2532;2533 2865;2866;2867;2868;2869;2870;2871 2865 7 ASNGDAWVEAHGK Unmodified 1340.6109 0.61092723 441 P38646;D6RJI2 HSPA9 Stress-70 protein, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 2 1 1 3 1 1 3 2 2 36.978 38.16 2;3 4.8931E-25 8296 Miao_Sh-H9_proteinG_mass3_141226_01 167.03 138.4 116990 302.9 219.7 212.37 1617.2 1264.7 8824.5 122.2 50.7 205.55 43433 33806 26928 278 441 274 2534;2535;2536;2537;2538;2539;2540;2541;2542;2543;2544;2545;2546;2547;2548;2549;2550;2551;2552 2872;2873;2874;2875;2876;2877;2878;2879;2880;2881;2882;2883;2884;2885;2886;2887 2878 16 ASNLLYGQLK Unmodified 1105.6132 0.61315906 609 Q8IXB1;Q8IXB1-2 DNAJC10 DnaJ homolog subfamily C member 10 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 58.021 59.759 2 2.1937E-06 14580 Miao_Sh-c_proteinG_mass3_141226_03 136.94 99.219 56593 0 0 0 0 0 11246 3026.7 9296.3 0 11241 10278 11505 279 609 275 2553;2554;2555;2556;2557;2558;2559 2888;2889;2890;2891;2892;2893;2894;2895 2890 8 ASPSLERPEK Acetyl (Protein N-term) 1154.5932 0.5931519 565 Q13601;Q13601-2 KRR1 KRR1 small subunit processome component homolog yes no 1 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 2 1 37.767 39.331 2 0.017685 8092 Miao_Sh-H9_proteinG_mass3_141226_02 53.08 31.052 7836.2 160.47 80.168 77.81 0 0 1396.8 0 0 36.248 2650.2 2638.7 795.79 280 565 276 2560;2561;2562;2563;2564;2565;2566;2567;2568;2569 2896;2897;2898;2899 2898 3 ASRDEIFAQSK Unmodified 1250.6255 0.62551466 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 36.947 38.902 3 0.0061385 8290 Miao_Sh-H9_proteinG_mass3_141226_01 79.492 58.044 7465.7 146.31 0 0 0 133.25 0 0 0 0 3384.2 2391 1410.9 281 434 277 2570;2571;2572;2573;2574 2900;2901;2902 2900 3 ASREEILAQAK Unmodified 1214.6619 0.66190017 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 2 1 2 1 2 36.128 38.257 2;3 0.014232 8093 Miao_Sh-H9_proteinG_mass3_141226_01 64.266 24.961 31711 0 107.39 0 31.024 0 7718.3 0 115.74 0 13943 3793.6 6002.6 282 433 278 2575;2576;2577;2578;2579;2580;2581;2582;2583;2584 2903;2904 2903 2 ASSEGGTAAGAGLDSLHK Unmodified 1627.7802 0.7801774 273 O15143 ARPC1B Actin-related protein 2/3 complex subunit 1B yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 1 1 1 44.443 45.746 3 4.1967E-05 10154 Miao_Sh-H9_proteinG_mass3_141226_01 66.152 49.379 7001.9 467.92 0 294.73 0 125.04 0 236.62 168.53 0 2606.7 1560.3 1542.1 283 273 279 2585;2586;2587;2588;2589;2590;2591;2592 2905 2905 1 ASVSELACIYSALILHDDEVTVTEDK Acetyl (Protein N-term) 2919.4059 0.40593457 324 P05386 RPLP1 60S acidic ribosomal protein P1 yes yes 1 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 2 1 1 116.37 116.81 3 1.4375E-26 30628 Miao_Sh-H9_Flag_mass3_141226_03 89.923 71.653 31513 0 5980.8 6932.5 13110 0 0 5490.4 0 0 0 0 0 284 324 280 2593;2594;2595;2596;2597;2598 2906;2907;2908;2909;2910;2911;2912 2912 5 ATDAEADVASLNR Unmodified 1331.6317 0.63172225 342;212 P07951-2;Q5TCU3;P07951;CON__Q3SX28;Q5TCU8;P09493;P09493-3;H0YL52;P09493-9;P09493-4;P09493-10;H0YKX5;H0YKP3;Q6ZN40 TPM2;TPM1 Tropomyosin beta chain;Tropomyosin alpha-1 chain no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 46.922 49.095 2 6.6154E-10 11687 Miao_Sh-H9_proteinG_mass3_141226_02 134.68 99.329 0 0 0 0 0 0 0 0 0 0 0 0 0 + 285 342;212 281 2599;2600;2601 2913;2914;2915 2914 3 ATDFVVPGPGK Unmodified 1086.571 0.5709599 298 O75874;C9J4N6 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 1 1 53.567 55.652 2 0.037929 12133 Miao_Sh-c_proteinG_mass3_141226_03 54.486 39.109 8649.7 414.71 0 1179.4 0 0 1361.6 0 0 0 4691 1003.1 0 286 298 282 2602;2603;2604;2605;2606 2916 2916 1 ATDTSQGELVHPK Acetyl (Protein N-term) 1423.6943 0.69432251 593 Q5SSJ5;X6RGJ2;B0QZK9;B0QZK8;Q5SSJ5-5 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 1 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 40.907 41.207 2 0.00011032 9817 Miao_Sh-H9_proteinG_mass3_141226_01 94.717 81.709 2444.5 19.727 0 0 0 0 0 174.91 364.88 0 1696.9 188.06 0 287 593 283 2607;2608;2609;2610;2611 2917 2917 1 ATEEFIIR Acetyl (Protein N-term) 1019.5288 0.52876073 573 Q14764;H3BQK6;H3BRL2;H3BUK7;H3BNF6;H3BP76;H3BPZ2;H3BNF2;H3BUP3;H3BQE7 MVP Major vault protein yes no 1 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 3 1 3 1 6 2 3 71.918 69.848 2 1.9014E-153 20182 Miao_Sh-c_proteinG_mass3_141226_03 264.4 198.13 210240 903.02 643.37 0 33072 22462 38788 0 0 821 7891.1 52855 52804 288 573 284 2612;2613;2614;2615;2616;2617;2618;2619;2620;2621;2622;2623;2624;2625;2626;2627;2628;2629;2630;2631;2632 2918;2919;2920;2921;2922;2923;2924;2925;2926;2927;2928;2929;2930;2931;2932;2933;2934;2935;2936;2937;2938;2939;2940;2941;2942;2943;2944;2945 2926 28 ATENDIANFFSPLNPIR Unmodified 1917.9585 0.95847612 426 P31942;P31942-2;P31942-3;B4DHY1;P31942-6;P31942-5;P31942-4 HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 2 3 1 4 112.34 103.2 2;3 7.8477E-28 37245 Miao_Sh-H9_proteinG_mass3_141226_01 155.26 118.66 53153 0 0 449.2 11616 602.95 9079 0 0 0 15212 6624.1 9569.6 289 426 285 2633;2634;2635;2636;2637;2638;2639;2640;2641;2642;2643;2644;2645 2946;2947;2948;2949;2950;2951;2952;2953;2954 2951 8 ATENDIYNFFSPLNPVR Unmodified 1995.969 0.96904081 199;472 P31943;G8JLB6;E9PCY7;H0YB39;F5GZT4;H0YBG7;H0YBD7;P52597 HNRNPH1;HNRNPF Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed no no 0 0 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 3 5 4 4 108.75 101.41 2;3 1.7526E-21 37204 Miao_Sh-H9_proteinG_mass3_141226_01 145.69 135.7 54428 8554.8 2258.8 1722.2 0 0 3319.6 7974.5 0 940.65 14765 6507.6 8384.4 290 199;472 286 2646;2647;2648;2649;2650;2651;2652;2653;2654;2655;2656;2657;2658;2659;2660;2661;2662;2663;2664;2665;2666;2667;2668 2955;2956;2957;2958;2959;2960;2961;2962;2963;2964;2965;2966;2967;2968;2969;2970;2971 2961 16 ATFDAISK Unmodified 851.43888 0.43888309 375 P15880;H0YEN5;E9PQD7 RPS2 40S ribosomal protein S2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 2 1 3 2 1 40.211 42.153 2 0.00068978 9958 Miao_Sh-H9_proteinG_mass3_141226_01 126.24 69.584 17297 510.77 0 0 0 0 3901.6 0 0 0 4816.3 4282.1 3786.5 291 375 287 2669;2670;2671;2672;2673;2674;2675;2676;2677 2972;2973;2974;2975;2976;2977;2978 2974 7 ATFDISLVVPK Unmodified 1188.6754 0.67542497 149 P55786;E9PLK3;A6NEC2;E9PP11;E5RJ24;E7EWZ2;I3L083;F5GZY4 NPEPPS;NPEPPSL1 Puromycin-sensitive aminopeptidase;Puromycin-sensitive aminopeptidase-like protein yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 82.473 83.927 2 0.03333 18117 Miao_Sh-c_proteinG_mass3_141226_01 51.286 28.142 0 0 0 0 0 0 0 0 0 0 0 0 0 292 149 288 2678 2979 2979 1 ATFISVQLK Acetyl (Protein N-term) 1047.5964 0.59644637 618 Q8WUM4;Q8WUM4-2;F8WEQ7;F8WBR8;C9IZF9 PDCD6IP Programmed cell death 6-interacting protein yes no 1 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 86.32 85.869 2 0.033514 19011 Miao_Sh-H9_Flag_mass3_141226_03 46.462 13.199 0 0 0 0 0 0 0 0 0 0 0 0 0 293 618 289 2679 2980 2980 1 ATGPPVSELITK Unmodified 1211.6762 0.67615325 377 P16401 HIST1H1B Histone H1.5 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 4 2 3 2 1 1 1 2 57.74 58.86 2;3 1.0303E-22 15881 Miao_Sh-H9_proteinG_mass3_141226_02 166.24 103.03 817560 19518 20926 18652 40834 40061 0 44645 63266 79609 137360 149650 203040 294 377 290 2680;2681;2682;2683;2684;2685;2686;2687;2688;2689;2690;2691;2692;2693;2694;2695;2696;2697;2698;2699;2700;2701;2702 2981;2982;2983;2984;2985;2986;2987;2988;2989;2990;2991;2992;2993;2994;2995;2996;2997;2998;2999;3000;3001;3002;3003;3004;3005;3006;3007;3008;3009;3010;3011;3012;3013;3014;3015;3016;3017;3018;3019;3020;3021;3022;3023;3024;3025;3026;3027;3028;3029;3030;3031;3032;3033;3034;3035;3036;3037;3038 3033 58 ATIAGGGVIPHIHK Unmodified 1369.783 0.78301836 350 P0C0S5;Q71UI9;Q71UI9-3;Q71UI9-4 H2AFZ;H2AFV Histone H2A.Z;Histone H2A.V yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 1 48.037 49.574 3 0.024192 12072 Miao_Sh-H9_proteinG_mass3_141226_01 42.317 17.464 10931 942.65 0 651.96 0 938.61 0 0 0 1158.6 3902.1 0 3337.1 295 350 291 2703;2704;2705;2706;2707;2708 3039 3039 1 ATISALEAK Unmodified 902.5073 0.50729701 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 2 1 2 2 1 2 1 3 42.999 45.328 2 0.0002211 9973 Miao_Sh-H9_proteinG_mass3_141226_02 123.6 37.852 30007 304.19 284.06 1450.5 359.76 2289.1 7990.5 64.863 0 0 8046.4 4948.8 4268.7 296 434 292 2709;2710;2711;2712;2713;2714;2715;2716;2717;2718;2719;2720;2721;2722;2723;2724 3040;3041;3042;3043;3044;3045;3046;3047 3045 8 ATISNDGATILK Unmodified 1202.6507 0.65066678 638 Q99832;Q99832-3;F8WAM2 CCT7 T-complex protein 1 subunit eta yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 50.828 52.382 2 0.0016242 11835 Miao_Sh-H9_proteinG_mass3_141226_03 94.402 44.979 10285 528.61 0 0 145.2 0 0 0 0 0 4175.2 1373.3 4063 297 638 293 2725;2726;2727;2728;2729 3048;3049;3050 3050 3 ATLSSIR Unmodified 746.42865 0.42865276 210 P46779;H0YKD8;P46779-2;P46779-3 RPL28 60S ribosomal protein L28 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 1 1 1 36.181 37.6 2 0.0064129 3845 Miao_Sh-c_Flag_mass3_141226_01 113.1 65.253 13823 800.15 0 0 445.2 487.4 1999.5 1073.5 876.21 847.79 3108.3 2092.2 2093.2 298 210 294 2730;2731;2732;2733;2734;2735;2736;2737;2738;2739 3051;3052;3053;3054;3055;3056;3057 3051 7 ATLWYVPLSLK Unmodified 1289.7384 0.73835958 44 O00154;F5GWE2;B4DUX0;K7EKP8;O00154-2;O00154-3;O00154-6;O00154-4;O00154-5;O00154-7 ACOT7 Cytosolic acyl coenzyme A thioester hydrolase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 98.455 95.184 2 0.0084519 20789 Miao_Sh-H9_Flag_mass3_141226_01 74.237 50.723 5922.2 1384.4 0 0 2235.1 0 367.21 1935.5 0 0 0 0 0 299 44 295 2740;2741;2742;2743 3058 3058 1 ATNESEDEIPQLVPIGK Unmodified 1838.9262 0.92617294 300 O76021;J3QSV6;B4DJ58 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 2 77.215 76.242 2;3 0.0041331 21054 Miao_Sh-H9_proteinG_mass3_141226_03 54.281 46.367 7741.7 0 0 0 1823.8 0 0 0 645.55 0 0 1355 3917.3 300 300 296 2744;2745;2746;2747;2748 3059;3060;3061;3062;3063;3064;3065;3066 3060 8 ATNFLAHEK Acetyl (Protein N-term) 1071.5349 0.53490874 422 P29692;P29692-3;E9PK01;E9PMW7;E9PPR1;E9PL12;E9PQ49;E9PI39;E9PQZ1;P29692-4;E9PN91;E9PL71;E9PJD0;E9PNW6;E9PKK3;E9PK72;E9PK06 EEF1D Elongation factor 1-delta yes no 1 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 1 1 2 1 1 1 54.209 55.729 2 0.00099405 13153 Miao_Sh-c_proteinG_mass3_141226_03 108.9 75.508 19821 920.01 524.77 1507.3 0 189.56 4288.1 1854 1167.4 0 5365.5 4004.3 0 301 422 297 2749;2750;2751;2752;2753;2754;2755;2756;2757;2758 3067;3068;3069 3067 3 ATPEQYQILK Unmodified 1189.6343 0.63428844 367 P14324;P14324-2 FDPS Farnesyl pyrophosphate synthase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 52.735 54.539 2 0.015306 13235 Miao_Sh-H9_proteinG_mass3_141226_03 68.525 37.797 0 0 0 0 0 0 0 0 0 0 0 0 0 302 367 298 2759;2760 3070;3071 3071 2 ATQALVLAPTR Unmodified 1139.6663 0.66625727 488 P60842;J3QL43;J3KT12;P60842-2;J3KTB5;J3QS69;J3QR64;J3QKZ9;J3QLN6;J3KS25;B4E102 EIF4A1 Eukaryotic initiation factor 4A-I yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching 1 1 2 1 1 50.286 51.991 2 5.5862E-11 11366 Miao_Sh-c_proteinG_mass3_141226_03 138.89 87.458 5387 0 1081.1 0 0 0 0 0 0 0 0 0 4305.9 303 488 299 2761;2762;2763;2764;2765;2766 3072;3073;3074;3075;3076 3075 5 ATSNVFAMFDQSQIQEFK Oxidation (M) 2105.9728 0.97280556 240 O14950;P19105;J3QRS3;P24844;J3KTJ1;P24844-2 MYL12B;MYL12A;MYL9 Myosin regulatory light chain 12B;Myosin regulatory light chain 12A;Myosin regulatory light polypeptide 9 yes no 0 0 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 4 1 4 2 8 2 2 2 2 4 5 91.998 86.375 2;3 1.1308E-74 18385 Miao_Sh-H9_Flag_mass3_141226_01 185.71 163.91 53069 0 926.66 6613.5 1306.8 0 1826 0 6865.7 11082 13940 8035.5 2473.2 304 240 300 2767;2768;2769;2770;2771;2772;2773;2774;2775;2776;2777;2778;2779;2780;2781;2782;2783;2784;2785;2786;2787;2788;2789;2790;2791;2792;2793;2794;2795;2796;2797;2798;2799;2800;2801;2802;2803;2804 3077;3078;3079;3080;3081;3082;3083;3084;3085;3086;3087;3088;3089;3090;3091;3092;3093;3094;3095;3096;3097;3098;3099;3100;3101;3102;3103;3104;3105;3106;3107;3108;3109;3110;3111;3112;3113;3114;3115;3116 3095 29 38 ATSNVFAMFDQSQIQEFK Unmodified 2089.9779 0.97789093 240 O14950;P19105;J3QRS3;P24844;J3KTJ1;P24844-2 MYL12B;MYL12A;MYL9 Myosin regulatory light chain 12B;Myosin regulatory light chain 12A;Myosin regulatory light polypeptide 9 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 4 1 4 2 4 1 2 2 2 3 4 102.45 97.498 2;3 3.6943E-84 36205 Miao_Sh-H9_proteinG_mass3_141226_01 202.53 186.35 208290 0 6956.2 14772 35199 289.08 914.43 28837 42116 24355 37899 796.58 16156 305 240 300 2805;2806;2807;2808;2809;2810;2811;2812;2813;2814;2815;2816;2817;2818;2819;2820;2821;2822;2823;2824;2825;2826;2827;2828;2829;2830;2831;2832;2833;2834 3117;3118;3119;3120;3121;3122;3123;3124;3125;3126;3127;3128;3129;3130;3131;3132;3133;3134;3135;3136;3137;3138;3139;3140;3141;3142;3143;3144;3145;3146;3147;3148;3149;3150;3151;3152;3153;3154 3146 37 ATVLNYLPK Unmodified 1017.5859 0.58588168 91 CON__ENSEMBL:ENSBTAP00000024146;P01023;P20742;H0YGH6;P20742-2 A2M;PZP Alpha-2-macroglobulin;Pregnancy zone protein yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 69.954 70.004 2 0.036827 13397 Miao_Sh-H9_Flag_mass3_141226_03 60.102 12.011 0 0 0 0 0 0 0 0 0 0 0 0 0 + 306 91 301 2835 3155 3155 1 ATVQQLEGR Acetyl (Protein N-term) 1042.5407 0.5407224 538 Q01469 FABP5 Fatty acid-binding protein, epidermal yes yes 1 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 54.535 55.728 2 4.547E-31 14651 Miao_Sh-H9_proteinG_mass3_141226_01 188.91 139.38 16507 624.18 0 0 0 0 0 1116.6 0 0 5883.4 4933.3 3949.6 307 538 302 2836;2837;2838;2839;2840 3156 3156 1 ATVWDEAEQDGIGEEVLK Acetyl (Protein N-term) 2029.948 0.94803059 684 R4GNH3 PSMC3 yes yes 1 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 98.677 97.824 2 0.00018785 22464 Miao_Sh-H9_Flag_mass3_141226_01 58.024 46.574 0 0 0 0 0 0 0 0 0 0 0 0 0 308 684 303 2841 3157 3157 1 ATYATSDFTLLELNNAANPAFNLFWAGWDR Unmodified 3388.6153 0.61529091 106 CON__P15636 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 2 2 2 10 1 4 8 4 1 120.08 119.68 3;4 2.0593E-92 29641 Miao_Sh-H9_Flag_mass3_141226_01 155.16 143.73 2822100 542840 117640 547590 304830 11315 0 110530 532120 570540 0 0 84718 + 309 106 304 2842;2843;2844;2845;2846;2847;2848;2849;2850;2851;2852;2853;2854;2855;2856;2857;2858;2859;2860;2861;2862;2863;2864;2865;2866;2867;2868;2869;2870;2871;2872;2873;2874;2875 3158;3159;3160;3161;3162;3163;3164;3165;3166;3167;3168;3169;3170;3171;3172;3173;3174;3175;3176;3177;3178;3179;3180;3181;3182;3183;3184;3185;3186;3187;3188;3189;3190;3191;3192;3193;3194;3195;3196;3197;3198;3199;3200;3201;3202;3203;3204;3205;3206;3207;3208;3209;3210 3191 48 ATYATSDFTLLELNNAANPAFNLFWAGWDRR Unmodified 3544.7164 0.71640194 106 CON__P15636 yes yes 0 0 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 2 3 2 1 2 2 1 1 115 115.28 3;4 1.5828E-97 28381 Miao_Sh-H9_Flag_mass3_141226_01 178.95 163.42 862790 225090 155360 170250 48619 0 0 62149 133420 67911 0 0 0 + 310 106 305 2876;2877;2878;2879;2880;2881;2882;2883;2884;2885;2886;2887;2888;2889 3211;3212;3213;3214;3215;3216;3217;3218;3219;3220;3221;3222;3223;3224;3225;3226 3219 15 AVAALLTIPEAEK Unmodified 1324.7602 0.76021723 606 Q86VP6;Q86VP6-2 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 71.92 73.474 2 0.0099429 21698 Miao_Sh-H9_proteinG_mass3_141226_01 60.161 44.024 4115.2 0 0 0 1412.5 0 89.355 1541 0 0 1072.3 0 0 311 606 306 2890;2891;2892;2893 3227 3227 1 AVAHHTTAAFIR Unmodified 1293.6942 0.69420335 453 P43686;P43686-2 PSMC4 26S protease regulatory subunit 6B yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 34.103 34.22 3 0.0010698 3693 Miao_Sh-H9_Flag_mass3_141226_01 83.045 56.661 2388.1 337.84 393.81 343.96 0 0 0 591.16 0 532.81 188.5 0 0 312 453 307 2894;2895;2896;2897;2898;2899 3228;3229;3230;3231;3232;3233 3231 6 AVANQTSATFLR Unmodified 1277.6728 0.67279921 39 P62191;B4DR63 PSMC1 26S protease regulatory subunit 4 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 2 2 2 1 53.202 53.854 2 1.399E-11 7473 Miao_Sh-H9_Flag_mass3_141226_02 140.78 96.973 10513 0 408.83 0 228.9 0 0 3002.6 3982.6 0 1573.6 1316.2 0 313 39 308 2900;2901;2902;2903;2904;2905;2906;2907;2908;2909;2910 3234;3235;3236;3237;3238;3239;3240 3237 7 AVAQALEVIPR Unmodified 1165.6819 0.68190733 43 P49368;B4DUR8;P49368-2 CCT3 T-complex protein 1 subunit gamma yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 2 1 1 1 2 1 65.424 66.323 2 5.4957E-11 12209 Miao_Sh-H9_Flag_mass3_141226_03 138.99 97.287 29554 3313.6 3346 0 0 2830.6 0 4458.8 7074.6 0 0 0 8530.8 314 43 309 2911;2912;2913;2914;2915;2916;2917;2918;2919;2920;2921 3241;3242;3243;3244;3245;3246;3247;3248;3249;3250;3251 3248 11 AVAVVVDPIQSVK Unmodified 1323.7762 0.77620165 264 O00487 PSMD14 26S proteasome non-ATPase regulatory subunit 14 yes yes 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 2 1 1 1 2 64.535 65.221 2 0.00028753 10543 Miao_Sh-c_Flag_mass3_141226_01 92.856 76.719 4807.3 1054 108.94 88.93 264.39 1062.4 0 0 2228.7 0 0 0 0 315 264 310 2922;2923;2924;2925;2926;2927;2928;2929 3252;3253;3254 3252 3 AVDDGVNTFK Unmodified 1064.5138 0.51383895 469 P50990;P50990-2;P50990-3 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 1 2 1 1 42.833 45.498 2 0.0041046 10601 Miao_Sh-H9_proteinG_mass3_141226_01 89.171 52.614 6674.2 0 214.99 822.12 0 421.9 833.39 0 0 0 2352.8 0 2029 316 469 311 2930;2931;2932;2933;2934;2935;2936 3255;3256 3256 2 AVDFAER Unmodified 806.39227 0.39226725 521 P62917;E9PKZ0;G3V1A1;E9PKU4;E9PP36 RPL8 60S ribosomal protein L8 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 1 3 2 1 38.866 39.624 2 0.0034795 4152 Miao_Sh-c_Flag_mass3_141226_01 125.81 28.743 5526.8 1129 0 0 808.85 1033.7 0 865.31 961.57 236.39 382.04 109.95 0 317 521 312 2937;2938;2939;2940;2941;2942;2943;2944;2945;2946;2947;2948;2949 3257;3258;3259;3260;3261;3262;3263;3264;3265;3266;3267;3268 3258 12 AVDIPHMDIEALK Unmodified 1450.749 0.74900062 519 P62906 RPL10A 60S ribosomal protein L10a yes yes 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 1 1 1 1 2 2 78.741 76.958 3 0.00061981 14574 Miao_Sh-H9_Flag_mass3_141226_01 76.326 51.63 26423 1408.2 510.81 2181.7 4472.6 3505.2 0 2429.5 3069.1 2707.4 3906.2 0 2232.7 318 519 313 2950;2951;2952;2953;2954;2955;2956;2957;2958;2959;2960;2961 3269;3270;3271;3272;3273;3274;3275;3276;3277;3278 3274 10 AVDPEDDFQR Unmodified 1190.5204 0.52038089 222 Q99848;H7C2Q8 EBNA1BP2 Probable rRNA-processing protein EBP2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 43.741 47.567 2 0.0018255 11532 Miao_Sh-H9_proteinG_mass3_141226_01 104.22 80.902 5297.2 0 0 0 0 303.44 2755.2 0 0 0 2238.5 0 0 319 222 314 2962;2963;2964 3279;3280 3279 2 AVDQHNAEAQDIFGK Unmodified 1641.7747 0.7746981 473 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 50.837 50.8 3 1.9993E-08 5662 Miao_Sh-c_Flag_mass3_141226_03 99.069 70.786 4876.4 0 259.82 0 0 0 0 2396.2 1484.5 0 735.93 0 0 320 473 315 2965;2966;2967;2968;2969 3281;3282 3281 2 AVDSLVPIGR Unmodified 1025.5869 0.58694431 410 P25705;P25705-2;P25705-3;K7EK77;K7ERX7;K7ENJ4 ATP5A1 ATP synthase subunit alpha, mitochondrial yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 1 1 1 2 1 1 1 2 59.081 60.861 2 6.7412E-05 14705 Miao_Sh-c_proteinG_mass3_141226_03 123.75 68.685 23421 0 1094.6 1021.7 0 527.02 0 3958.9 0 0 5838.4 1001 9979.7 321 410 316 2970;2971;2972;2973;2974;2975;2976;2977;2978;2979 3283;3284;3285;3286;3287;3288 3287 6 AVDSQILPK Unmodified 969.5495 0.54949617 542 Q02878 RPL6 60S ribosomal protein L6 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 3 1 1 2 1 46.84 48.374 2 4.0806E-12 10059 Miao_Sh-c_proteinG_mass3_141226_03 140.17 65.705 31456 0 0 148.06 0 0 0 0 0 974.26 10763 10438 9132.3 322 542 317 2980;2981;2982;2983;2984;2985;2986;2987;2988 3289;3290;3291;3292;3293;3294;3295;3296;3297;3298;3299;3300 3290 12 AVFDETYPDPVR Unmodified 1407.667 0.66704513 466 P49588;H3BPK7 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 61.838 64.996 2 0.0042856 16545 Miao_Sh-c_proteinG_mass3_141226_03 68.515 55.56 0 0 0 0 0 0 0 0 0 0 0 0 0 323 466 318 2989;2990 3301;3302 3301 2 AVFPSIVGR Unmodified 944.54435 0.54435122 524;528 P63261;P60709;I3L3I0;I3L1U9;I3L4N8;Q6S8J3;A5A3E0;K7EM38;I3L3R2;J3KT65;P63267-2;P0CG38;G5E9R0;E7EVS6;C9JUM1;C9JZR7;C9JTX5;F8WCH0;P68133;P68032;Q5T8M8;A6NL76;P63267;P62736;Q5T8M7;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 ACTG1;ACTB;POTEE;POTEF;ACTG2;POTEI;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Actin, gamma-enteric smooth muscle;POTE ankyrin domain family member I;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 5 2 1 2 1 1 1 7 8 2 69.911 67.247 2 3.5828E-10 16100 Miao_Sh-c_proteinG_mass3_141226_03 155.07 85.635 402970 14759 14565 316.47 37755 30871 45718 29827 41621 38582 47789 48814 52349 324 524;528 319 2991;2992;2993;2994;2995;2996;2997;2998;2999;3000;3001;3002;3003;3004;3005;3006;3007;3008;3009;3010;3011;3012;3013;3014;3015;3016;3017;3018;3019;3020;3021;3022;3023 3303;3304;3305;3306;3307;3308;3309;3310;3311;3312;3313;3314;3315;3316;3317;3318;3319;3320;3321;3322;3323;3324;3325;3326;3327;3328;3329;3330;3331;3332;3333;3334;3335;3336;3337;3338;3339;3340;3341;3342;3343;3344;3345;3346;3347;3348;3349;3350;3351;3352;3353;3354;3355;3356;3357;3358;3359;3360;3361;3362;3363;3364;3365;3366;3367 3322 65 AVFPSIVGRPR Unmodified 1197.6982 0.6982261 524;528 P63261;P60709;I3L3I0;I3L1U9;I3L4N8;Q6S8J3;A5A3E0;K7EM38;I3L3R2;J3KT65;P63267-2;P0CG38;G5E9R0;E7EVS6;C9JUM1;C9JZR7;C9JTX5;F8WCH0;P68133;P68032;Q5T8M8;A6NL76;P63267;P62736;Q5T8M7;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 ACTG1;ACTB;POTEE;POTEF;ACTG2;POTEI;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Actin, gamma-enteric smooth muscle;POTE ankyrin domain family member I;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle no no 0 0 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 4 7 3 3 8 6 5 1 5 3 15 70.35 67.324 2;3 1.9477E-30 7554 Miao_Sh-c_Flag_mass3_141226_01 174.41 143.85 613540 28538 38903 35008 45188 57616 89666 0 53581 47057 83677 72757 61553 325 524;528 320 3024;3025;3026;3027;3028;3029;3030;3031;3032;3033;3034;3035;3036;3037;3038;3039;3040;3041;3042;3043;3044;3045;3046;3047;3048;3049;3050;3051;3052;3053;3054;3055;3056;3057;3058;3059;3060;3061;3062;3063;3064;3065;3066;3067;3068;3069;3070;3071;3072;3073;3074;3075;3076;3077;3078;3079;3080;3081;3082;3083;3084;3085 3368;3369;3370;3371;3372;3373;3374;3375;3376;3377;3378;3379;3380;3381;3382;3383;3384;3385;3386;3387;3388;3389;3390;3391;3392;3393;3394;3395;3396;3397;3398;3399;3400;3401;3402;3403;3404;3405;3406;3407;3408;3409;3410;3411;3412;3413;3414;3415;3416;3417;3418;3419;3420;3421;3422;3423;3424;3425;3426;3427;3428;3429;3430;3431;3432;3433;3434;3435;3436;3437;3438;3439;3440;3441;3442;3443;3444;3445;3446;3447;3448;3449;3450;3451;3452;3453;3454;3455;3456;3457;3458;3459;3460;3461;3462;3463;3464;3465;3466;3467;3468;3469;3470;3471;3472;3473;3474;3475;3476;3477;3478;3479;3480;3481;3482;3483;3484;3485;3486;3487;3488;3489;3490;3491;3492;3493;3494;3495;3496;3497;3498;3499;3500;3501;3502;3503;3504;3505;3506;3507;3508;3509;3510;3511;3512;3513;3514;3515;3516;3517;3518;3519;3520;3521;3522;3523;3524;3525;3526;3527;3528;3529;3530;3531;3532;3533;3534;3535;3536;3537;3538;3539;3540;3541;3542;3543;3544;3545;3546;3547;3548;3549;3550;3551;3552;3553;3554;3555;3556;3557;3558;3559;3560;3561;3562;3563;3564;3565;3566;3567;3568;3569;3570;3571;3572;3573;3574 3370 207 AVFSDSLVPALEAFGLEGVFR Unmodified 2223.1576 0.15756986 173 Q6L8Q7;F6T1Q0;Q6L8Q7-2 PDE12 2',5'-phosphodiesterase 12 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 2 118.82 119.32 3 0.010729 30988 Miao_Sh-H9_Flag_mass3_141226_02 42.348 37.054 0 0 0 0 0 0 0 0 0 0 0 0 0 326 173 321 3086;3087 3575;3576 3576 2 AVFVDLEPTVIDEVR Unmodified 1700.8985 0.89850163 529 P68363 TUBA1B Tubulin alpha-1B chain no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 4 4 3 1 3 3 2 1 5 2 12 96.907 91.969 2;3 2.132E-130 34742 Miao_Sh-H9_proteinG_mass3_141226_02 229.17 169.07 714680 73164 76166 79722 45180 16731 54300 97904 63467 29887 81491 52315 44351 327 529 322 3088;3089;3090;3091;3092;3093;3094;3095;3096;3097;3098;3099;3100;3101;3102;3103;3104;3105;3106;3107;3108;3109;3110;3111;3112;3113;3114;3115;3116;3117;3118;3119;3120;3121;3122;3123;3124;3125;3126;3127;3128;3129 3577;3578;3579;3580;3581;3582;3583;3584;3585;3586;3587;3588;3589;3590;3591;3592;3593;3594;3595;3596;3597;3598;3599;3600;3601;3602;3603;3604;3605;3606;3607;3608;3609;3610;3611;3612;3613;3614;3615;3616;3617;3618;3619;3620;3621;3622;3623;3624;3625;3626;3627;3628;3629;3630;3631;3632;3633;3634;3635;3636;3637;3638;3639;3640;3641;3642;3643;3644;3645;3646;3647;3648;3649;3650;3651;3652;3653;3654;3655;3656;3657;3658;3659;3660;3661;3662;3663;3664;3665;3666;3667;3668;3669;3670;3671;3672;3673;3674;3675;3676;3677;3678;3679;3680;3681;3682;3683;3684;3685;3686;3687;3688 3650 112 AVGHPFVIQLGR Unmodified 1292.7353 0.73533988 272 O14980 XPO1 Exportin-1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 64.143 63.658 3 0.0087591 11012 Miao_Sh-H9_Flag_mass3_141226_01 55.721 44.358 1377 433.31 0 0 0 0 0 642.62 301.11 0 0 0 0 328 272 323 3130;3131;3132 3689 3689 1 AVIDLNNR Unmodified 913.49813 0.49812931 537 Q01081;Q01081-2;Q01081-4 U2AF1 Splicing factor U2AF 35 kDa subunit yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 41.464 45.408 2 0.0013557 9465 Miao_Sh-c_proteinG_mass3_141226_03 107.59 71.037 0 0 0 0 0 0 0 0 0 0 0 0 0 329 537 324 3133;3134;3135 3690;3691;3692 3690 3 AVIGSTYMLTQDEVLWEK Unmodified 2082.0343 0.034343181 573 Q14764 MVP Major vault protein yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 90.947 92.3 3 0.0015078 21185 Miao_Sh-c_proteinG_mass3_141226_01 51.089 42.523 0 0 0 0 0 0 0 0 0 0 0 0 0 330 573 325 3136 3693 3693 1 AVIYNPATQADWTAK Unmodified 1647.8257 0.82567103 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4;E7ERA5 MYH10 Myosin-10 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 3 3 2 1 1 3 2 3 64.391 66.815 2;3 5.7116E-13 17982 Miao_Sh-H9_proteinG_mass3_141226_03 140.03 116.91 98892 1408.9 0 1514 7412.3 9669.9 24391 448.02 0 3369.7 16867 13277 20534 331 434 326 3137;3138;3139;3140;3141;3142;3143;3144;3145;3146;3147;3148;3149;3150;3151;3152;3153;3154;3155;3156;3157;3158;3159 3694;3695;3696;3697;3698;3699;3700;3701;3702;3703;3704;3705;3706;3707;3708;3709;3710;3711;3712;3713;3714;3715;3716;3717;3718;3719;3720;3721;3722;3723;3724;3725;3726;3727;3728;3729;3730;3731 3730 38 AVLIAGQPGTGK Unmodified 1110.6397 0.63970816 671 Q9Y230;X6R2L4;M0R0Y3;B3KQ59;M0QXI6 RUVBL2 RuvB-like 2 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 42.081 42.633 2 0.010055 4340 Miao_Sh-c_Flag_mass3_141226_02 62.528 26.104 709.98 0 298.94 185.67 128.45 0 0 0 96.921 0 0 0 0 332 671 327 3160;3161;3162;3163 3732 3732 1 AVLSAEQLR Unmodified 985.55564 0.55564418 468 P50454;E9PJH8;E9PIG2;E9PRS3;E9PNX1;E9PK86;E9PMI5;E9PR70;E9PPV6;E9PQ34;E9PLA6 SERPINH1 Serpin H1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 46.285 48.992 2 0.0042443 11561 Miao_Sh-H9_proteinG_mass3_141226_02 88.819 31.771 0 0 0 0 0 0 0 0 0 0 0 0 0 333 468 328 3164 3733 3733 1 AVNVYSTSVTSDNLSR Acetyl (Protein N-term) 1753.8483 0.84825697 583 Q15691 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes yes 1 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 71.604 69.762 2 0.00037624 12846 Miao_Sh-H9_Flag_mass3_141226_01 66.826 55.243 3541.9 0 0 0 0 0 0 958.52 0 0 557.2 88.284 1937.9 334 583 329 3165;3166;3167;3168;3169 3734;3735 3735 2 AVPETRPNHTIYINNLNEK Acetyl (Protein N-term) 2264.1549 0.1549441 260 P09012;M0R268;M0R0G9;M0QXK2;M0R221;M0R2B8 SNRPA U1 small nuclear ribonucleoprotein A yes no 1 0 0 0 1 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 55.213 59.373 3 0.005726 9153 Miao_Sh-c_proteinG_mass3_141226_02 40.952 27.004 0 0 0 0 0 0 0 0 0 0 0 0 0 335 260 330 3170 3736 3736 1 AVPLALALISVSNPR Unmodified 1519.9086 0.9086128 559 Q13200;E9PCS3;E7EW34;H7C1H2 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 2 1 1 3 2 97.726 98.327 2;3 4.1675E-06 23465 Miao_Sh-H9_Flag_mass3_141226_03 85.909 65.132 26738 0 2213.8 4482.1 0 831.57 0 3004.5 11287 4919.1 0 0 0 336 559 331 3171;3172;3173;3174;3175;3176;3177;3178;3179;3180 3737;3738;3739;3740;3741;3742;3743;3744;3745;3746;3747;3748 3748 12 AVQGAQQPSLYQIR Unmodified 1557.8263 0.82633974 556 Q13045;Q13045-2;Q13045-3 FLII Protein flightless-1 homolog yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 2 54.131 57.088 2;3 0.012207 15216 Miao_Sh-H9_proteinG_mass3_141226_01 53.377 27.848 1507.9 0 0 0 0 0 0 0 0 0 0 0 1507.9 337 556 332 3181;3182;3183 3749;3750;3751 3749 3 AVSDWIDEQEK Unmodified 1318.6041 0.60411052 553 Q12906;Q12906-4;Q12906-5;Q12906-2;Q12906-6;Q12906-3;Q12906-7;K7EKJ9;K7ER69;K7EQ75;K7ERM6;K7ENK6;K7EM82;K7EJ09 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 1 2 1 2 2 58.614 60.833 2 4.7635E-18 14729 Miao_Sh-c_proteinG_mass3_141226_03 124.6 86.019 13184 576.52 0 244.81 310.66 856.83 7742.1 429.64 0 0 1664.5 0 1358.5 338 553 333 3184;3185;3186;3187;3188;3189;3190;3191;3192;3193;3194 3752;3753;3754 3754 2 AVTELNEPLSNEDR Unmodified 1585.7584 0.75837933 544 Q04917 YWHAH 14-3-3 protein eta yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 46.689 52.754 2 0.0021762 11859 Miao_Sh-c_proteinG_mass3_141226_03 66.674 37.545 0 0 0 0 0 0 0 0 0 0 0 0 0 339 544 334 3195 3755 3755 1 AVTEQGAELSNEER Unmodified 1531.7114 0.71142914 418 P27348;E9PG15 YWHAQ 14-3-3 protein theta yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 1 1 37.701 40.357 2 0.0037334 7950 Miao_Sh-c_proteinG_mass3_141226_03 63.16 45.531 1317.1 0 0 0 0 0 0 0 0 0 0 0 1317.1 340 418 335 3196;3197 3756;3757 3756 2 AVTEQGHELSNEER Unmodified 1597.7332 0.73322721 427 P31946;P31946-2;Q4VY20;Q4VY19 YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 33.234 33.494 3 0.0020306 6394 Miao_Sh-H9_proteinG_mass3_141226_02 65.043 50.363 2450.3 0 155.7 0 0 0 0 150.1 86.428 0 1180.8 0 877.28 341 427 336 3198;3199;3200;3201;3202;3203 3758;3759;3760 3759 3 AVVGVVAGGGR Unmodified 940.54541 0.54541385 521 P62917;E9PKZ0;E9PKU4;E9PP36 RPL8 60S ribosomal protein L8 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 4 1 1 1 2 1 1 3 37.728 39.249 2 2.4045E-30 7448 Miao_Sh-c_proteinG_mass3_141226_03 173.39 115.16 170080 4832.7 4039.3 3498.1 2430.5 2184.4 36126 4254.4 4164 450.07 45657 34147 28294 342 521 337 3204;3205;3206;3207;3208;3209;3210;3211;3212;3213;3214;3215;3216;3217;3218;3219;3220;3221;3222 3761;3762;3763;3764;3765;3766;3767;3768;3769;3770;3771;3772;3773;3774;3775;3776;3777;3778;3779;3780;3781;3782;3783;3784;3785;3786;3787;3788;3789;3790;3791;3792;3793;3794;3795;3796;3797;3798;3799 3780 39 AVVIVDDR Unmodified 885.49198 0.4919813 399;578 P23246;P23246-2;Q15233;Q15233-2;C9IZL7;H7C367 SFPQ;NONO Splicing factor, proline- and glutamine-rich;Non-POU domain-containing octamer-binding protein no no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 2 1 1 1 1 41.026 42.4 2 3.0123E-12 9220 Miao_Sh-H9_proteinG_mass3_141226_02 163.9 102.92 25674 604.03 520.22 460.75 716.46 619.36 5427.1 541.27 779.47 0 5251.3 6029.1 4724.9 343 399;578 338 3223;3224;3225;3226;3227;3228;3229;3230;3231;3232;3233;3234;3235 3800;3801;3802;3803;3804;3805;3806;3807;3808;3809;3810;3811;3812;3813;3814 3811 15 AVVQSPQVTEVL Unmodified 1268.6976 0.69761697 588 Q3KQU3;Q3KQU3-2;Q3KQU3-4;Q3KQU3-3 MAP7D1 MAP7 domain-containing protein 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 72.466 72.416 2 0.057062 21200 Miao_Sh-H9_proteinG_mass3_141226_01 47.429 34.932 2522 0 0 0 0 0 0 0 0 0 2522 0 0 344 588 339 3236 3815 3815 1 AVYTLTSLYR Unmodified 1185.6394 0.63937381 651 Q9NR28;Q9NR28-2;F5H796;F5H0Q4;F5GYH3;F5GX50;H7BZK7 DIABLO Diablo homolog, mitochondrial yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 2 4 1 1 1 1 68.37 70.225 2 1.6376E-33 12156 Miao_Sh-c_Flag_mass3_141226_02 183 144.43 28955 0 7927.1 1205.2 0 0 688.5 17734 0 0 0 1400.7 0 345 651 340 3237;3238;3239;3240;3241;3242;3243;3244;3245;3246 3816;3817;3818;3819;3820;3821 3816 6 AYAALAALEK Unmodified 1019.5651 0.56514624 553 Q12906;Q12906-4;Q12906-5;Q12906-2;Q12906-6;Q12906-3;Q12906-7 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1 1 62.279 64.317 2 0.0038214 17757 Miao_Sh-H9_proteinG_mass3_141226_01 90.149 58.515 27057 710.55 784.56 791.4 1749.5 1773 4793.5 0 0 0 6446.5 5586.5 4421.6 346 553 341 3247;3248;3249;3250;3251;3252;3253;3254;3255;3256 3822;3823;3824;3825;3826;3827;3828;3829 3824 8 AYELALYLR Unmodified 1110.6073 0.6073454 72 P35080-2;C9J0J7;G5E9Q6 PFN2 Profilin yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 88.268 84.274 2 0.0018004 33002 Miao_Sh-H9_proteinG_mass3_141226_01 97.431 64.168 0 0 0 0 0 0 0 0 0 0 0 0 0 347 72 342 3257;3258;3259 3830;3831;3832 3832 3 AYILNLVK Unmodified 932.5695 0.56950333 65 P50991;B7Z9L0;P50991-2;B7Z2F4 CCT4 T-complex protein 1 subunit delta yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 1 69.558 71.398 2 0.01136 13595 Miao_Sh-H9_Flag_mass3_141226_01 89.142 58.976 21216 0 0 0 3751.2 2513.8 3637.1 2811.1 3914 2958.1 0 1630.9 0 348 65 343 3260;3261;3262;3263;3264;3265;3266 3833;3834;3835;3836 3835 4 AYLDQTVVPILLQGLAVLAK Unmodified 2124.2558 0.25582734 645 Q9C005 DPY30 Protein dpy-30 homolog yes yes 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 122.52 123.23 3 0.018185 30469 Miao_Sh-c_Flag_mass3_141226_03 39.825 35.838 0 0 0 0 0 0 0 0 0 0 0 0 0 349 645 344 3267 3837 3837 1 AYLPVNESFGFTADLR Unmodified 1798.889 0.88899957 366 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 91.308 90.857 3 0.023454 20757 Miao_Sh-H9_Flag_mass3_141226_03 40.857 24.11 0 0 0 0 0 0 0 0 0 0 0 0 0 350 366 345 3268 3838 3838 1 AYVVLGQFLVLK Unmodified 1348.8119 0.81185887 293 O75531 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed yes yes 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 105.75 102.29 2 0.021217 23869 Miao_Sh-c_proteinG_mass3_141226_02 53.237 41.654 5556.1 0 1125.8 0 523.76 0 0 0 0 0 3906.5 0 0 351 293 346 3269;3270;3271;3272 3839;3840 3839 2 CDFTEDQTAEFK Acetyl (Protein N-term) 1531.6137 0.61368893 179 P60660;P60660-2;F8W1R7;G3V1V0;G3V1Y7 MYL6;PDE6H Myosin light polypeptide 6 yes no 1 0 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 3 4 1 3 3 2 1 4 66.702 67.859 2 7.8953E-69 18520 Miao_Sh-H9_proteinG_mass3_141226_02 204.01 190 84104 0 2883.2 0 0 0 14890 0 9011.4 7947.4 21082 7121.7 21168 352 179 347 3273;3274;3275;3276;3277;3278;3279;3280;3281;3282;3283;3284;3285;3286;3287;3288;3289;3290;3291;3292;3293;3294;3295 3841;3842;3843;3844;3845;3846;3847;3848;3849;3850;3851;3852;3853;3854;3855;3856;3857;3858;3859;3860;3861;3862;3863;3864;3865;3866;3867;3868 3861 28 CFIVGADNVGSK Unmodified 1265.6074 0.60742176 326 P05388;F8VWS0;Q3B7A4;F8VU65;Q8NHW5;F8VPE8;G3V210;F8VZS0;F8VS58;F8VQY6;F8VRK7;F8VWV4 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 50.98 54.172 2 0.0016275 14161 Miao_Sh-H9_proteinG_mass3_141226_01 72.29 48.971 5862.9 0 0 0 0 0 1251.3 0 0 0 3734.5 0 877.03 353 326 348 3296;3297;3298 3869 3869 0 CIVQTTSWSQCSK Unmodified 1583.7072 0.70721216 268 O00622 CYR61 Protein CYR61 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 52.357 55.571 2 6.9205E-05 12767 Miao_Sh-H9_proteinG_mass3_141226_03 92.039 79.619 3235 0 263.55 0 0 378.68 2003.2 0 0 0 0 589.5 0 354 268 349 3299;3300;3301;3302;3303 3870;3871;3872 3872 3 CLELFSELAEDK Unmodified 1452.6806 0.68064628 344 P08238 HSP90AB1 Heat shock protein HSP 90-beta yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 87.369 87.52 2 0.0046244 18712 Miao_Sh-H9_Flag_mass3_141226_01 74.987 48.87 9458.8 0 2056.2 0 1646.2 0 0 1824.4 0 3931.9 0 0 0 355 344 350 3304;3305;3306;3307 3873;3874 3874 2 CLELFTELAEDK Unmodified 1466.6963 0.69629635 341 P07900;P07900-2;Q86U12 HSP90AA1 Heat shock protein HSP 90-alpha yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 89.133 89.667 2 0.05649 19913 Miao_Sh-c_proteinG_mass3_141226_01 51.135 35.991 5026 0 816.77 0 2866.2 0 0 0 1343.1 0 0 0 0 356 341 351 3308;3309;3310 3875 3875 0 CLYASVLTAQPR Unmodified 1377.7075 0.70747015 366 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 64.99 65.341 2 0.0076874 18368 Miao_Sh-H9_proteinG_mass3_141226_01 64.224 38.751 0 0 0 0 0 0 0 0 0 0 0 0 0 357 366 352 3311 3876 3876 1 CNEIINWLDK Unmodified 1303.6231 0.62307182 356 P11142;E9PKE3;E9PNE6;A8K7Q2;E9PS65;E9PM13 HSPA8 Heat shock cognate 71 kDa protein yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 83.247 82.57 2 0.0045883 17866 Miao_Sh-H9_Flag_mass3_141226_02 88.338 43.256 0 0 0 0 0 0 0 0 0 0 0 0 0 358 356 353 3312;3313 3877;3878 3878 2 CPEPCPPPK Unmodified 1080.4732 0.47323646 396 P35325;P22532;P35326;P22531;Q9BYE4;Q96RM1 SPRR2B;SPRR2D;SPRR2A;SPRR2E;SPRR2G;SPRR2F Small proline-rich protein 2B;Small proline-rich protein 2D;Small proline-rich protein 2A;Small proline-rich protein 2E;Small proline-rich protein 2G;Small proline-rich protein 2F yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 30.073 31.142 2 0.00046152 5706 Miao_Sh-H9_proteinG_mass3_141226_03 106.42 62.074 707.64 0 33.864 0 24.522 0 0 0 0 0 0 649.26 0 359 396 354 3314;3315;3316;3317 3879;3880 3880 2 CPFTGNVSIR Unmodified 1149.5601 0.56007764 254 P62280;M0QZC5 RPS11 40S ribosomal protein S11 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 2 1 1 50.678 55.089 2 0.0045794 14187 Miao_Sh-H9_proteinG_mass3_141226_01 99.174 48.821 3289.2 0 0 0 0 0 1484.3 0 0 0 0 0 1804.9 360 254 355 3318;3319;3320;3321 3881;3882;3883 3882 3 DAASLESQLQDTQELLQEETR Unmodified 2403.1401 0.14014147 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 1 1 1 1 3 1 104.58 95.662 3 3.2066E-107 23320 Miao_Sh-c_proteinG_mass3_141226_01 195.86 170.02 67095 0 0 0 0 7958.8 13353 5627 0 0 18180 13107 8868.9 361 434 356 3322;3323;3324;3325;3326;3327;3328;3329;3330;3331;3332;3333;3334 3884;3885;3886;3887;3888;3889;3890;3891;3892;3893;3894;3895;3896;3897;3898;3899;3900;3901;3902 3885 18 DADSITLFDVQQK Unmodified 1478.7253 0.72528829 478 P53621;P53621-2 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 2 1 72.382 74.497 2 0.0043802 19762 Miao_Sh-c_proteinG_mass3_141226_03 66.989 40.202 7732.3 0 0 0 0 1523.9 1337.3 1773.2 0 0 2031.2 0 1066.8 362 478 357 3335;3336;3337;3338;3339;3340 3903;3904;3905 3903 3 DAEAWFNEK Unmodified 1108.4825 0.48253882 104 P13645;CON__P13645;Q7Z3Y7;CON__Q148H6;CON__Q7Z3Y7;Q7Z3Z0;Q7Z3Y8;CON__Q7Z3Z0;CON__Q7Z3Y8 KRT10;KRT28;KRT25;KRT27 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28;Keratin, type I cytoskeletal 25;Keratin, type I cytoskeletal 27 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 61.569 63.171 2 5.003E-11 16105 Miao_Sh-c_proteinG_mass3_141226_03 159.34 105.56 35915 1321.9 0 0 1798.1 0 8427.6 0 4112.8 3831.2 0 7529.5 8893.6 + 363 104 358 3341;3342;3343;3344;3345;3346;3347 3906;3907;3908;3909;3910;3911;3912;3913;3914;3915;3916 3907 11 DAEDAVR Unmodified 774.3508 0.35079637 77 Q16629;C9JAB2;Q16629-3;Q16629-2;Q16629-4 SRSF7 Serine/arginine-rich splicing factor 7 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 27.61 28.094 2 0.00014598 2719 Miao_Sh-H9_Flag_mass3_141226_03 147.69 67.754 1227.3 123.09 174.43 0 0 212.76 0 113.58 298.16 305.25 0 0 0 364 77 359 3348;3349;3350;3351;3352;3353 3917;3918;3919 3919 3 DAEDAVYGR Unmodified 994.43559 0.43558863 234 Q07955;J3KTL2;Q07955-3;Q07955-2 SRSF1 Serine/arginine-rich splicing factor 1 yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 2 1 1 2 2 1 1 1 37.082 38.226 2 1.9143E-06 3708 Miao_Sh-H9_Flag_mass3_141226_02 138.98 113.4 5773.2 0 653.12 70.599 53.519 871.11 874.52 538.69 743.93 776.66 0 142.34 1048.7 365 234 360 3354;3355;3356;3357;3358;3359;3360;3361;3362;3363;3364;3365;3366 3920;3921;3922;3923;3924;3925;3926;3927;3928 3926 9 DAEEWFFTK Unmodified 1171.5186 0.51858998 97 P02533;CON__P02533 KRT14 Keratin, type I cytoskeletal 14 no no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 78.895 81.853 2 4.838E-06 17289 Miao_Sh-c_proteinG_mass3_141226_02 135.63 103.49 10437 0 0 0 6013.9 4423.4 0 0 0 0 0 0 0 + 366 97 361 3367;3368 3929;3930 3930 2 DAETWFLSK Unmodified 1095.5237 0.52367535 102 P08779;CON__P08779;K7ENW6 KRT16 Keratin, type I cytoskeletal 16 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 2 4 1 1 2 1 2 63.773 61.467 2 1.7632E-05 20918 Miao_Sh-c_proteinG_mass3_141226_03 116.13 65.835 17370 1077.8 291.97 841.09 381.05 0 3256.8 0 2676.5 2172.1 1503.1 2273.6 2896.1 + 367 102 362 3369;3370;3371;3372;3373;3374;3375;3376;3377;3378;3379;3380;3381;3382;3383;3384 3931;3932;3933;3934;3935;3936;3937 3933 7 DAFDRNPELQNLLLDDFFK Unmodified 2309.1328 0.13281167 35 P52209;F5H7U0;B4DQJ8 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 104.37 87.176 3 7.0574E-07 32539 Miao_Sh-H9_proteinG_mass3_141226_03 75.533 59.872 0 0 0 0 0 0 0 0 0 0 0 0 0 368 35 363 3385 3938 3938 1 DAFLGSFLYEYSR Unmodified 1566.7355 0.73545904 99 CON__P02769 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 2 1 1 1 1 102.35 101 2 0.0043289 22864 Miao_Sh-H9_Flag_mass3_141226_01 67.136 49.063 22120 5858.2 0 3516.3 0 2045.3 0 5601.5 989.77 0 4108.5 0 0 + 369 99 364 3386;3387;3388;3389;3390;3391;3392;3393 3939;3940;3941 3941 3 DAGQISGLNVLR Unmodified 1241.6728 0.67279921 441 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 1 2 2 1 3 2 1 1 2 5 3 66.777 67.65 2;3 1.0603E-203 18232 Miao_Sh-H9_proteinG_mass3_141226_03 268.95 177.08 937870 6340.7 3583.9 18490 94166 57650 147970 8389.4 9613.4 7939.2 232050 195920 155760 370 441 365 3394;3395;3396;3397;3398;3399;3400;3401;3402;3403;3404;3405;3406;3407;3408;3409;3410;3411;3412;3413;3414;3415;3416;3417;3418;3419 3942;3943;3944;3945;3946;3947;3948;3949;3950;3951;3952;3953;3954;3955;3956;3957;3958;3959;3960;3961;3962;3963;3964;3965;3966;3967;3968;3969;3970;3971;3972;3973;3974;3975;3976;3977;3978;3979;3980;3981;3982;3983;3984;3985;3986;3987;3988;3989;3990 3985 49 DAGTIAGLNVLR Unmodified 1198.667 0.66698555 356 P11142;E9PKE3;P11142-2;E9PN89;E9PLF4;E9PI65;E9PQQ4;E9PQK7;E9PK54 HSPA8 Heat shock cognate 71 kDa protein yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 1 2 2 1 5 1 3 4 2 2 2 70.842 72.507 2;3 7.0871E-129 12524 Miao_Sh-c_Flag_mass3_141226_01 229 152.83 250170 0 15668 15649 18189 10805 17049 28125 25904 29914 35417 29812 23635 371 356 366 3420;3421;3422;3423;3424;3425;3426;3427;3428;3429;3430;3431;3432;3433;3434;3435;3436;3437;3438;3439;3440;3441;3442;3443;3444;3445;3446;3447 3991;3992;3993;3994;3995;3996;3997;3998;3999;4000;4001;4002;4003;4004;4005;4006;4007;4008;4009;4010;4011;4012;4013;4014;4015;4016;4017;4018;4019;4020;4021;4022;4023;4024;4025;4026;4027;4028;4029;4030;4031;4032;4033;4034;4035 3992 45 DAGTIAGLNVMR Unmodified 1216.6234 0.62340617 355 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 76.197 66.485 2 1.6008E-28 12053 Miao_Sh-H9_Flag_mass3_141226_01 134.13 100.24 3838.6 0 0 0 0 0 0 2372.2 0 0 368.71 237.42 860.33 372 355 367 3448;3449;3450;3451 4036 4036 0 DAGVIAGLNVLR Unmodified 1196.6877 0.68772099 343 P08107;P08107-2;E7EP94 HSPA1A Heat shock 70 kDa protein 1A/1B no no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 85.653 82.612 2 0.004452 16187 Miao_Sh-H9_Flag_mass3_141226_01 75.739 56.416 8714.8 1790.4 861.52 0 0 164.67 2002.3 2143.1 0 0 0 1752.9 0 373 343 368 3452;3453;3454;3455;3456;3457 4037;4038;4039;4040 4038 4 DAIPENLPPLTADFAEDK Unmodified 1954.9524 0.95238769 99 CON__P02769 yes yes 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 2 4 1 3 3 4 1 1 89.793 87.225 2;3 6.2714E-10 16846 Miao_Sh-c_Flag_mass3_141226_03 90.581 73.329 22248 1103.5 3790.6 3524.1 0 0 969.43 2885.5 7311.6 0 0 1886.4 776.47 + 374 99 369 3458;3459;3460;3461;3462;3463;3464;3465;3466;3467;3468;3469;3470;3471;3472;3473;3474;3475;3476;3477;3478 4041;4042;4043;4044;4045;4046;4047;4048;4049;4050;4051;4052;4053;4054;4055;4056;4057 4042 17 DALEFWLQAGVDGFQVR Unmodified 1949.9636 0.9635615 165 P08195;P08195-3;F5GZS6;J3KPF3;P08195-2;P08195-4 SLC3A2 4F2 cell-surface antigen heavy chain yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 112.73 113.74 3 0.021202 26562 Miao_Sh-c_Flag_mass3_141226_03 38.777 19.1 0 0 0 0 0 0 0 0 0 0 0 0 0 375 165 370 3479 4058 4058 1 DALSDLALHFLNK Unmodified 1455.7722 0.7721789 65 P50991;B7Z9L0;P50991-2;B7Z2F4 CCT4 T-complex protein 1 subunit delta yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching 1 1 2 1 1 2 1 1 104.84 100.79 3 5.3464E-05 24290 Miao_Sh-c_proteinG_mass3_141226_02 103.43 69.54 24562 0 0 2159.5 2821.6 3963.6 0 2989.7 0 4053.3 4200.4 343.08 4030.5 376 65 371 3480;3481;3482;3483;3484;3485;3486;3487;3488;3489 4059;4060;4061;4062;4063 4062 5 DANGNSFATR Unmodified 1051.4683 0.46828574 511 P62701;P22090;Q8TD47;C9JEH7 RPS4X;RPS4Y1;RPS4Y2 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1;40S ribosomal protein S4, Y isoform 2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 32.482 32.853 2 0.046979 6662 Miao_Sh-H9_proteinG_mass3_141226_01 56.043 23.723 615.58 41.741 23.118 0 0 0 0 34.676 0 0 275.62 240.42 0 377 511 372 3490;3491;3492;3493;3494 4064 4064 1 DANLYISGLPR Unmodified 1217.6404 0.64043645 46 Q15717;B4DVB8;M0QZR9;M0R055 ELAVL1 ELAV-like protein 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 1 69.659 68.807 2 0.0048279 20151 Miao_Sh-H9_proteinG_mass3_141226_01 84.169 45.866 7917.7 0 0 0 0 0 0 0 0 0 1620.7 4013.2 2283.7 378 46 373 3495;3496;3497;3498 4065;4066;4067 4065 3 DAQGLVLFDVTGQVR Unmodified 1616.8522 0.85222014 573 Q14764;H3BQK6;H3BRL2;H3BUK7;H3BNF6;H3BP76 MVP Major vault protein yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 9 6 6 1 2 5 8 10 97.749 93.338 2;3 1.8364E-174 33056 Miao_Sh-H9_proteinG_mass3_141226_01 249.71 221.43 227320 2602.2 0 273.26 27938 7267.6 47762 625.36 6296.1 0 63613 57791 13156 379 573 374 3499;3500;3501;3502;3503;3504;3505;3506;3507;3508;3509;3510;3511;3512;3513;3514;3515;3516;3517;3518;3519;3520;3521;3522;3523;3524;3525;3526;3527;3528;3529;3530;3531;3532;3533;3534;3535;3536;3537;3538;3539;3540;3541;3542;3543;3544;3545;3546;3547 4068;4069;4070;4071;4072;4073;4074;4075;4076;4077;4078;4079;4080;4081;4082;4083;4084;4085;4086;4087;4088;4089;4090;4091;4092;4093;4094;4095;4096;4097;4098;4099;4100;4101;4102;4103;4104;4105;4106;4107;4108;4109;4110;4111;4112;4113;4114;4115;4116;4117;4118;4119;4120;4121;4122;4123;4124;4125;4126;4127;4128;4129;4130;4131;4132;4133;4134;4135;4136;4137;4138 4102 71 DASDDLDDLNFFNQK Unmodified 1755.7588 0.75877326 390 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 90.998 86.804 2 0.006034 19932 Miao_Sh-c_proteinG_mass3_141226_01 58.723 55.536 3198.2 0 0 0 1596.5 0 922.91 0 0 678.77 0 0 0 380 390 375 3548;3549;3550;3551 4139;4140 4139 2 DASIVGFFDDSFSEAHSEFLK Unmodified 2347.0645 0.064457335 197 P30101;G5EA52 PDIA3 Protein disulfide-isomerase A3 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 106.39 108.04 3 0.00031108 27209 Miao_Sh-c_proteinG_mass3_141226_01 55.621 48.573 0 0 0 0 0 0 0 0 0 0 0 0 0 381 197 376 3552 4141 4141 1 DASVHTLLDALETLGER Unmodified 1838.9374 0.93740633 61 O14763;B7Z588;O14763-2 TNFRSF10B Tumor necrosis factor receptor superfamily member 10B yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 2 1 2 2 106.63 106.73 3 0.00011476 24184 Miao_Sh-c_Flag_mass3_141226_02 68.576 47.263 3485 308.61 1429.7 0 0 0 0 0 0 1746.6 0 0 0 382 61 377 3553;3554;3555;3556;3557;3558;3559 4142;4143;4144;4145;4146 4143 5 DATNVGDEGGFAPNILENK Unmodified 1959.9174 0.91739917 333 P06733;P06733-2 ENO1 Alpha-enolase yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 11 6 5 1 8 3 9 6 9 24 75.11 72.26 2;3 5.2042E-177 14381 Miao_Sh-H9_Flag_mass3_141226_03 240.01 199.56 134600 20442 8067.9 677.13 18598 14845 0 16980 10660 620.19 13273 21344 9094 383 333 378 3560;3561;3562;3563;3564;3565;3566;3567;3568;3569;3570;3571;3572;3573;3574;3575;3576;3577;3578;3579;3580;3581;3582;3583;3584;3585;3586;3587;3588;3589;3590;3591;3592;3593;3594;3595;3596;3597;3598;3599;3600;3601;3602;3603;3604;3605;3606;3607;3608;3609;3610;3611;3612;3613;3614;3615;3616;3617;3618;3619;3620;3621;3622;3623;3624;3625;3626;3627;3628;3629;3630;3631;3632;3633;3634;3635;3636;3637;3638;3639;3640;3641;3642;3643;3644;3645 4147;4148;4149;4150;4151;4152;4153;4154;4155;4156;4157;4158;4159;4160;4161;4162;4163;4164;4165;4166;4167;4168;4169;4170;4171;4172;4173;4174;4175;4176;4177;4178;4179;4180;4181;4182;4183;4184;4185;4186;4187;4188;4189;4190;4191;4192;4193;4194;4195;4196;4197;4198;4199;4200;4201;4202;4203;4204;4205;4206;4207;4208;4209;4210;4211;4212;4213;4214;4215;4216;4217;4218;4219;4220;4221;4222;4223;4224;4225;4226;4227;4228;4229;4230;4231;4232;4233;4234;4235;4236;4237;4238;4239;4240;4241;4242;4243;4244;4245;4246;4247;4248;4249;4250;4251;4252;4253;4254 4194 108 DAVEDLESVGK Unmodified 1160.5561 0.55609769 534 P81605;P81605-2 DCD Dermcidin;Survival-promoting peptide;DCD-1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 63.507 60.767 2 0.007049 16636 Miao_Sh-H9_proteinG_mass3_141226_02 77.674 32.306 6881.8 0 0 0 0 0 831.84 0 0 0 0 4554.3 1495.7 384 534 379 3646;3647;3648 4255 4255 1 DAVLLLFANK Unmodified 1102.6386 0.63864553 387 P18085;C9JPM4;C9JAK5;U3KQF2 ARF4 ADP-ribosylation factor 4 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 2 2 1 1 1 3 1 1 1 94.237 92.389 2 0.00035236 19692 Miao_Sh-H9_Flag_mass3_141226_02 116.52 84.376 24979 1846.2 1634 2888.1 5544.4 330.47 542.99 2504.8 4152.2 2196.7 2791.6 547.66 0 385 387 380 3649;3650;3651;3652;3653;3654;3655;3656;3657;3658;3659;3660;3661;3662;3663 4256;4257;4258;4259;4260;4261;4262;4263;4264;4265;4266;4267;4268;4269 4265 14 DAVLLVFANK Unmodified 1088.623 0.62299547 170 P61204;P84077;F5H423;P84085;C9J1Z8;B7ZB63 ARF3;ARF1;ARF5 ADP-ribosylation factor 3;ADP-ribosylation factor 1;ADP-ribosylation factor 5 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 1 2 2 1 1 2 1 2 4 2 84.436 80.396 2 0.0002099 30478 Miao_Sh-H9_proteinG_mass3_141226_01 126.31 52.648 34457 2420.7 2541 3117.2 6092.2 1549.1 0 2111.3 3889.5 1453.8 6555 3488.9 1237.8 386 170 381 3664;3665;3666;3667;3668;3669;3670;3671;3672;3673;3674;3675;3676;3677;3678;3679;3680;3681;3682 4270;4271;4272;4273;4274;4275;4276;4277;4278;4279;4280;4281;4282 4279 13 DDEVQVVR Unmodified 958.47197 0.47197413 238 P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;Q9UNX3;J3KTJ8;E5RIT6 RPL26;KRBA2;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching 1 2 1 1 1 1 37.54 39.746 2 0.0078486 3501 Miao_Sh-c_Flag_mass3_141226_03 91.069 49.62 2172.1 71.205 0 0 107.37 318.38 1149.3 0 0 525.93 0 0 0 387 238 382 3683;3684;3685;3686;3687;3688;3689 4283;4284;4285;4286;4287 4283 5 DDPVTNLNNAFEVAEK Unmodified 1774.8374 0.83735793 283 O43707;K7EJH8 ACTN4 Alpha-actinin-4 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 5 1 2 2 1 83.03 78.602 2;3 2.6271E-05 16490 Miao_Sh-c_proteinG_mass3_141226_01 84.653 73.395 12374 0 1461.8 1044.9 2591.8 2387.8 257.62 0 0 1461.8 1217.2 1950.9 0 388 283 383 3690;3691;3692;3693;3694;3695;3696;3697;3698;3699;3700;3701;3702;3703;3704 4288;4289;4290;4291;4292;4293;4294;4295 4288 8 DDVILNEPSADAPAALYQTIEENIK Unmodified 2728.3443 0.34432059 673 Q9Y287 ITM2B Integral membrane protein 2B;BRI2, membrane form;BRI2 intracellular domain;BRI2C, soluble form;Bri23 peptide yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 107.95 107.85 3 0.002549 26582 Miao_Sh-H9_Flag_mass3_141226_02 38.357 30.605 0 0 0 0 0 0 0 0 0 0 0 0 0 389 673 384 3705 4296 4296 1 DEEVHAGLGELLR Unmodified 1436.726 0.72595699 468 P50454;E9PJH8;E9PIG2;E9PRS3;E9PNX1;E9PK86;E9PMI5;E9PR70;E9PPV6;E9PQ34 SERPINH1 Serpin H1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 69.665 68.763 3 0.043629 12939 Miao_Sh-H9_Flag_mass3_141226_02 40.377 28.331 0 0 0 0 0 0 0 0 0 0 0 0 0 390 468 385 3706 4297 4297 1 DEIFAQSK Unmodified 936.45526 0.45526144 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 38.43 41.939 2 0.020143 9421 Miao_Sh-H9_proteinG_mass3_141226_01 80.165 29.2 2050 0 0 0 0 0 106.24 0 0 0 1943.8 0 0 391 434 386 3707;3708 4298 4298 1 DEILPTTPISEQK Unmodified 1469.7613 0.76133944 402 P23396;E9PPU1;E9PL09;P23396-2;H0YEU2;E9PSF4 RPS3 40S ribosomal protein S3 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 2 2 1 2 1 2 61.937 60.275 2 2.0631E-06 9923 Miao_Sh-H9_Flag_mass3_141226_01 122.46 85.315 12408 0 296.54 0 0 3399.7 0 446.8 0 389.62 0 7675.3 199.82 392 402 387 3709;3710;3711;3712;3713;3714;3715;3716;3717;3718;3719;3720 4299;4300;4301;4302;4303;4304;4305;4306;4307 4302 9 DELADEIANSSGK Unmodified 1347.6154 0.61540349 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 5 2 4 3 3 3 2 2 4 53.918 55.347 2;3 7.6214E-231 12909 Miao_Sh-c_proteinG_mass3_141226_03 264.28 207.32 182110 208 6034.6 5489.2 502.32 14289 6190.6 10086 25278 14492 29863 33429 36243 393 433 388 3721;3722;3723;3724;3725;3726;3727;3728;3729;3730;3731;3732;3733;3734;3735;3736;3737;3738;3739;3740;3741;3742;3743;3744;3745;3746;3747;3748;3749;3750;3751;3752;3753 4308;4309;4310;4311;4312;4313;4314;4315;4316;4317;4318;4319;4320;4321;4322;4323;4324;4325;4326;4327;4328;4329;4330;4331;4332;4333;4334;4335;4336;4337;4338;4339;4340 4321 33 DELADEITNSASGK Unmodified 1448.6631 0.66308196 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 58.006 59.434 2;3 0.00019865 9796 Miao_Sh-H9_Flag_mass3_141226_02 78.505 57.772 15558 0 0 0 0 0 0 0 0 0 6466.6 9091.6 0 394 434 389 3754;3755;3756;3757;3758 4341;4342;4343;4344 4343 4 DELHIVEAEAMNYEGSPIK Unmodified 2144.0096 0.0095849934 334 P06748;P06748-2;P06748-3 NPM1 Nucleophosmin yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 2 2 83.743 84.068 3 1.1029E-11 19219 Miao_Sh-H9_Flag_mass3_141226_02 91.547 79.17 7006.1 0 0 479.9 0 0 0 6526.2 0 0 0 0 0 395 334 390 3759;3760;3761;3762;3763;3764;3765 4345;4346;4347;4348;4349;4350 4347 6 DELHIVEAEAMNYEGSPIK Oxidation (M) 2160.0045 0.0044996155 334 P06748;P06748-2;P06748-3 NPM1 Nucleophosmin yes no 0 0 1 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 2 3 1 2 3 1 3 89.45 82.519 3 7.8366E-09 30008 Miao_Sh-H9_proteinG_mass3_141226_03 84.249 78.875 35158 0 0 2630 4615.5 0 4536.1 3475.6 10311 0 3844.1 3674.6 2071.2 396 334 390 3766;3767;3768;3769;3770;3771;3772;3773;3774;3775;3776;3777;3778;3779;3780;3781 4351;4352;4353;4354;4355;4356;4357;4358;4359;4360;4361;4362;4363;4364 4362 43 13 DELILEGNDIELVSNSAALIQQATTVK Unmodified 2883.5077 0.50769752 117 P32969;D6RAN4;H0Y9V9;H0Y9R4 RPL9 60S ribosomal protein L9 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 2 113.72 110.04 3 1.0909E-56 37486 Miao_Sh-H9_proteinG_mass3_141226_03 132.37 105.93 22762 0 0 0 12617 0 0 0 0 0 0 10145 0 397 117 391 3782;3783;3784;3785;3786;3787;3788;3789 4365;4366;4367;4368;4369;4370;4371;4372;4373 4372 9 DELTDLDQSNVTEETPEGEEHHPVADTENK Unmodified 3377.4655 0.46551095 611 Q8NC51-3;Q8NC51-4 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 58.101 58.552 4 1.1646E-14 15715 Miao_Sh-H9_proteinG_mass3_141226_01 64.213 54.136 2782.4 0 0 0 0 0 0 0 0 0 2782.4 0 0 398 611 392 3790 4374 4374 1 DEPDWESLIFLAR Unmodified 1589.7726 0.77257283 467 P49915;P49915-2 GMPS GMP synthase [glutamine-hydrolyzing] yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 108.4 109.51 2 0.020809 24810 Miao_Sh-c_Flag_mass3_141226_03 49.333 34.66 0 0 0 0 0 0 0 0 0 0 0 0 0 399 467 393 3791 4375 4375 1 DEQLESLFQR Unmodified 1263.6095 0.60953025 323 P05198;H0YJS4;G3V4T5 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 62.426 60.333 2 0.020325 21208 Miao_Sh-H9_proteinG_mass3_141226_03 64.82 28.396 6096.7 0 0 0 591.2 0 0 0 0 2162.4 1427 1916.1 0 400 323 394 3792;3793;3794;3795;3796 4376;4377 4377 2 DETEFYLGK Unmodified 1100.5026 0.50260556 87 P18077;F8WBS5;F8WB72;C9K025 RPL35A 60S ribosomal protein L35a yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 1 1 57.442 60.015 2 4.6039E-16 14793 Miao_Sh-c_proteinG_mass3_141226_03 169.44 131.89 44740 812.74 760.03 0 0 1301.6 11494 0 0 0 0 15739 14633 401 87 395 3797;3798;3799;3800;3801;3802;3803;3804 4378;4379;4380;4381;4382 4378 5 DEVYQILEK Unmodified 1135.5761 0.57610486 473 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 2 1 2 2 66.208 66.333 2 0.0036321 12092 Miao_Sh-H9_Flag_mass3_141226_03 90.827 37.076 2879.7 1528.7 1351.1 0 0 0 0 0 0 0 0 0 0 402 473 396 3805;3806;3807;3808;3809;3810;3811;3812 4383;4384;4385;4386;4387;4388;4389;4390 4390 8 DFDFESANAQFNK Unmodified 1531.6579 0.657937 42 Q8ND56;K7EMZ9;B4DTG6;Q8ND56-2 LSM14A Protein LSM14 homolog A yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 68.335 70.207 2 0.00077982 18304 Miao_Sh-c_proteinG_mass3_141226_03 76.073 55.013 2219.8 0 0 0 0 0 0 0 0 0 1095.3 202.89 921.6 403 42 397 3813;3814;3815;3816 4391;4392 4391 2 DFELDVLEEAYTTEHWLVR Unmodified 2364.1274 0.12739194 153 P46977;E9PNQ1 STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 115.31 112.16 3 1.6973E-16 26562 Miao_Sh-c_Flag_mass3_141226_01 127.91 100.2 4129.6 1192.5 0 0 0 0 0 457.75 0 0 0 2479.3 0 404 153 398 3817;3818;3819 4393 4393 1 DFFQSYGNVVELR Unmodified 1572.7573 0.75725712 561 Q13283;F5H4D6 G3BP1 Ras GTPase-activating protein-binding protein 1 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 2 1 1 1 94.552 89.673 2;3 8.2899E-05 19700 Miao_Sh-c_proteinG_mass3_141226_01 101.3 74.597 13391 3194.3 0 0 0 4564.7 0 0 0 0 3079 977.43 1575.1 405 561 399 3820;3821;3822;3823;3824;3825;3826;3827 4394;4395;4396;4397;4398;4399;4400;4401 4396 7 DFGLLVFVR Unmodified 1064.6019 0.6018661 533 P78527;E7EUY0;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 118.13 105.95 2 0.012652 38456 Miao_Sh-H9_proteinG_mass3_141226_01 76.064 52.745 1261.1 0 0 0 0 0 0 0 0 0 1261.1 0 0 406 533 400 3828 4402 4402 1 DFLAGGIAAAISK Unmodified 1232.6765 0.6764876 361 P12236;I7HJJ0 SLC25A6 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 1 88.398 85.749 2 0.00046182 18024 Miao_Sh-H9_Flag_mass3_141226_01 82.529 39.222 6635.2 1291.3 0 875.82 0 1249.5 0 2271.3 0 0 563.29 384 0 407 361 401 3829;3830;3831;3832;3833;3834 4403 4403 1 DFLAGGVAAAISK Unmodified 1218.6608 0.66083754 322 P05141 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching 1 3 1 2 3 2 3 1 86.03 82.953 2 0.00041295 15789 Miao_Sh-H9_Flag_mass3_141226_03 79.652 58.351 10304 0 357.97 689.69 0 660.96 0 0 0 0 4813.2 3782.6 0 408 322 402 3835;3836;3837;3838;3839;3840;3841;3842;3843;3844;3845;3846;3847;3848;3849;3850 4404;4405;4406;4407;4408;4409;4410;4411;4412;4413;4414;4415;4416;4417;4418 4411 15 DFLDEYIFLAVGR Unmodified 1556.7875 0.78749461 267 O00571;O00571-2;O15523;B4DXX7 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 2 1 113.64 113.64 2 0.0014494 26487 Miao_Sh-c_Flag_mass3_141226_01 73.881 60.696 3790.5 0 2442.9 0 0 0 0 1347.6 0 0 0 0 0 409 267 403 3851;3852;3853;3854;3855;3856 4419;4420;4421;4422;4423 4419 5 DFLEAVNK Unmodified 934.476 0.47599688 437 P35998;B7Z5E2 PSMC2 26S protease regulatory subunit 7 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 2 59.505 58.603 2 0.015957 9304 Miao_Sh-H9_Flag_mass3_141226_02 81.642 15.839 0 0 0 0 0 0 0 0 0 0 0 0 0 410 437 404 3857;3858 4424;4425 4424 2 DFLLKPELLR Unmodified 1242.7336 0.73360855 175 O00148;Q13838;F8VQ10;Q13838-2;Q5STU3;K7ENP6;F6QWI5;K7EL56;K7EIL8;F6U6E2;K7EN69;F6S2B7;F6SXL5;E7EMX2;K7EN25;F6QYI9;K7EPJ3;F6R6M7;F6S4E6;F6TRA5;K7EQN7;B1Q2N1;F6WLT2;O00148-2 DDX39A;DDX39B;DDX39 ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 1 1 85.748 84.47 3 0.021383 16712 Miao_Sh-H9_Flag_mass3_141226_02 64.73 44.03 13434 2536.1 0 1223.5 0 2971.5 0 0 1621.6 2618.5 2462.7 0 0 411 175 405 3859;3860;3861;3862;3863;3864 4426;4427 4426 2 DFLLTAR Unmodified 834.45995 0.45995289 232 P63173;J3KT73;J3QL01;J3KSP2 RPL38 60S ribosomal protein L38 yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 2 1 1 2 1 2 1 2 1 3 65.902 64.267 2 0.0034743 10053 Miao_Sh-H9_Flag_mass3_141226_01 124.83 43.538 23950 1390.2 1895.5 1831 1257.4 243.51 0 2222.7 4325.1 2554.6 4146.4 1437.8 2646.1 412 232 406 3865;3866;3867;3868;3869;3870;3871;3872;3873;3874;3875;3876;3877;3878;3879;3880;3881;3882 4428;4429;4430;4431;4432;4433;4434;4435;4436;4437;4438 4432 11 DFNHINVELSLLGK Unmodified 1597.8464 0.84640648 117 P32969;D6RAN4;H0Y9V9;E7ESE0 RPL9 60S ribosomal protein L9 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 2 2 1 1 2 2 4 100.03 93.348 2;3 6.9649E-07 34329 Miao_Sh-H9_proteinG_mass3_141226_01 123.29 91.41 38403 0 1648.1 0 5014.4 0 11003 4027.2 911.96 1000.1 8145.2 4113.6 2539.5 413 117 407 3883;3884;3885;3886;3887;3888;3889;3890;3891;3892;3893;3894;3895;3896;3897;3898 4439;4440;4441;4442;4443;4444;4445;4446;4447;4448;4449;4450 4444 12 DFSALESQLQDTQELLQEENR Unmodified 2492.1667 0.16669058 433 P35579 MYH9 Myosin-9 yes yes 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6 1 4 5 2 3 5 1 3 3 14 2 105.26 100.38 2;3;4 2.1385E-295 22134 Miao_Sh-c_Flag_mass3_141226_01 272.19 247.29 512630 3389.8 1713.3 5567.9 58981 42537 57308 26165 26133 28508 137680 72778 51869 414 433 408 3899;3900;3901;3902;3903;3904;3905;3906;3907;3908;3909;3910;3911;3912;3913;3914;3915;3916;3917;3918;3919;3920;3921;3922;3923;3924;3925;3926;3927;3928;3929;3930;3931;3932;3933;3934;3935;3936;3937;3938;3939;3940;3941;3942;3943;3944;3945;3946;3947 4451;4452;4453;4454;4455;4456;4457;4458;4459;4460;4461;4462;4463;4464;4465;4466;4467;4468;4469;4470;4471;4472;4473;4474;4475;4476;4477;4478;4479;4480;4481;4482;4483;4484;4485;4486;4487;4488;4489;4490;4491;4492;4493;4494;4495;4496;4497;4498;4499;4500;4501;4502;4503;4504;4505;4506;4507 4451 56 DFTPVCTTELGR Unmodified 1394.65 0.65001485 423 P30041 PRDX6 Peroxiredoxin-6 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 62.251 59.056 2 0.017146 10610 Miao_Sh-H9_Flag_mass3_141226_02 55.776 38.264 4597.8 0 0 0 1092.9 0 0 0 0 612.85 0 2276.5 615.65 415 423 409 3948;3949;3950;3951;3952 4508;4509 4508 2 DFVNYLVR Unmodified 1024.5342 0.53418046 548 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 1 80.922 80.199 2 0.00072978 15217 Miao_Sh-c_proteinG_mass3_141226_01 123.16 91.777 9347.2 0 348.44 241.4 2519 1873.3 0 0 249.38 2014.7 2100.9 0 0 416 548 410 3953;3954;3955;3956;3957;3958;3959;3960 4510;4511;4512;4513;4514 4510 5 DGADIHSDLFISIAQALLGGTAR Unmodified 2340.2074 0.2073736 632 Q96EY1;Q96EY1-2;E7ES32 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS 1 1 2 2 2 1 1 1 112.61 110.23 3 0.020866 37623 Miao_Sh-H9_proteinG_mass3_141226_03 31.599 24.649 25308 452.51 4025.8 2080.7 718.07 0 0 1416.8 0 2842.6 0 1668.5 12103 417 632 411 3961;3962;3963;3964;3965;3966;3967;3968;3969;3970;3971 4515;4516;4517 4517 2 DGDVDQGFR Unmodified 1007.4308 0.4308376 224 Q9BQG0;I3L1L3;Q9BQG0-2;I3L311 MYBBP1A Myb-binding protein 1A yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 38.825 39.386 2 0.0038253 4192 Miao_Sh-H9_Flag_mass3_141226_01 89.08 68.454 1062.7 0 42.132 46.687 0 0 0 267.1 0 244.42 0 0 462.31 418 224 412 3972;3973;3974;3975;3976 4518;4519 4518 2 DGEDQTQDTELVETRPAGDGTFQK Unmodified 2636.1838 0.1837972 1 P01892;P30455;P04439;P18462;P16189;Q9TNN7;Q31612;P10321;P30501;Q09160;P05534;A2BF26;Q5SRN7;Q5SRN5;A2AEA2;Q29960-2;P01893;P30512;P30459;P30457;P30456;P30453;P30450;P30447;P30443;P16190;P16188;P13746;P10316;P10314;P01891;Q29963;Q29960;Q07000;P30508;P30505;P13746-2;Q95604 HLA-A;HLA-C;HLA-B;HLA-H HLA class I histocompatibility antigen, A-2 alpha chain;HLA class I histocompatibility antigen, A-36 alpha chain;HLA class I histocompatibility antigen, A-3 alpha chain;HLA class I histocompatibility antigen, A-25 alpha chain;HLA class I histocompatibility antigen, A-31 alpha chain;HLA class I histocompatibility antigen, Cw-5 alpha chain;HLA class I histocompatibility antigen, B-73 alpha chain;HLA class I histocompatibility antigen, Cw-7 alpha chain;HLA class I histocompatibility antigen, Cw-2 alpha chain;HLA class I histocompatibility antigen, A-80 alpha chain;HLA class I histocompatibility antigen, A-24 alpha chain;HLA class I histocompatibility antigen, Cw-16 alpha chain;Putative HLA class I histocompatibility antigen, alpha chain H;HLA class I histocompatibility antigen, A-29 alpha chain;HLA class I histocompatibility antigen, A-74 alpha chain;HLA class I histocompatibility antigen, A-66 alpha chain;HLA class I histocompatibility antigen, A-43 alpha chain;HLA class I histocompatibility antigen, A-34 alpha chain;HLA class I histocompatibility antigen, A-26 alpha chain;HLA class I histocompatibility antigen, A-23 alpha chain;HLA class I histocompatibility antigen, A-1 alpha chain;HLA class I histocompatibility antigen, A-33 alpha chain;HLA class I histocompatibility antigen, A-30 alpha chain;HLA class I histocompatibility antigen, A-11 alpha chain;HLA class I histocompatibility antigen, A-69 alpha chain;HLA class I histocompatibility antigen, A-32 alpha chain;HLA class I histocompatibility antigen, A-68 alpha chain;HLA class I histocompatibility antigen, Cw-6 alpha chain;HLA class I histocompatibility antigen, Cw-15 alpha chain;HLA class I histocompatibility antigen, Cw-12 alpha chain;HLA class I histocompatibility antigen, Cw-8 alpha chain;HLA class I histocompatibility antigen, Cw-17 alpha chain yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 54.312 54.563 3 2.8452E-05 8018 Miao_Sh-H9_Flag_mass3_141226_03 55.718 49.236 0 0 0 0 0 0 0 0 0 0 0 0 0 419 1 413 3977 4520 4520 1 DGFVTVDELK Unmodified 1121.5605 0.56045479 285 O43852-14;O43852-3;O43852;O43852-13;O43852-9;O43852-11;O43852-10;O43852-5;O43852-6 CALU Calumenin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 69.366 68.363 2 0.012628 19024 Miao_Sh-H9_proteinG_mass3_141226_01 72.848 32.496 5893.2 0 1380.9 0 0 0 138.96 1256.5 841.93 0 2274.9 0 0 420 285 414 3978;3979;3980;3981;3982 4521 4521 1 DGLAFNALIHR Unmodified 1225.6568 0.65675521 283 O43707;Q9H254;C9JRP8;M0QZQ3;Q9H254-2;Q9H254-4 ACTN4;SPTBN4 Alpha-actinin-4;Spectrin beta chain, non-erythrocytic 4 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 2 2 1 91.965 85.179 3 1.773E-06 13593 Miao_Sh-c_proteinG_mass3_141226_01 132.39 100.9 16604 0 0 0 7516.5 0 0 0 0 0 2364.6 4556.7 2165.9 421 283 415 3983;3984;3985;3986;3987;3988 4522;4523;4524;4525 4522 4 DGNGYISAAELR Unmodified 1264.6048 0.60477922 202 P62158;H0Y7A7;E7ETZ0;E7EMB3;G3V361;Q96HY3 CALM1;CALM2;CALM3 Calmodulin yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 2 2 57.567 58.904 2 0.00041907 15608 Miao_Sh-H9_proteinG_mass3_141226_02 103.3 84.33 49594 1895.9 0 0 0 3017.8 0 3155.6 4555.6 3248.4 11430 11805 10486 422 202 416 3989;3990;3991;3992;3993;3994;3995;3996;3997;3998 4526;4527;4528;4529;4530;4531;4532;4533;4534;4535 4533 10 DGPYITAEEAVAVYTTTVHWLESR Unmodified 2707.313 0.31296088 223 Q6P2Q9;I3L0J9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 118.01 118.86 3 0.0030843 28632 Miao_Sh-c_Flag_mass3_141226_03 39.21 30.701 0 0 0 0 0 0 0 0 0 0 0 0 0 423 223 417 3999 4536 4536 1 DGQVINETSQHHDDLE Unmodified 1835.7922 0.79219865 346 P08670 VIM Vimentin yes yes 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 3 1 3 4 42.249 43.001 2;3 2.8389E-09 9683 Miao_Sh-H9_proteinG_mass3_141226_02 104.95 85.313 21314 724.56 639.59 486.83 0 615.99 0 1020.3 802.17 827.44 7953.9 2756.6 5486.4 424 346 418 4000;4001;4002;4003;4004;4005;4006;4007;4008;4009;4010;4011;4012;4013;4014;4015;4016;4017 4537;4538;4539;4540;4541;4542;4543;4544;4545;4546;4547;4548;4549;4550;4551;4552;4553 4548 17 DGTGVVEFVR Unmodified 1077.5455 0.54547343 234 Q07955;J3KTL2;Q07955-3;Q07955-2;J3KSR8 SRSF1 Serine/arginine-rich splicing factor 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 57.292 59.066 2 0.00092456 15272 Miao_Sh-H9_proteinG_mass3_141226_03 113.44 86.752 7805 0 1107.8 0 933.98 0 4195.6 0 1147.1 0 0 420.38 0 425 234 419 4018;4019;4020;4021;4022;4023 4554;4555 4555 2 DGVFLYFEDNAGVIVNNK Unmodified 2012.9844 0.98435652 514 P62829;J3KTJ3;J3KT29 RPL23 60S ribosomal protein L23 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 110.74 98.564 3 0.0083568 35437 Miao_Sh-H9_proteinG_mass3_141226_01 43.208 30.577 0 0 0 0 0 0 0 0 0 0 0 0 0 426 514 420 4024 4556 4556 1 DGVPEGAQLQGPVHR Unmodified 1558.7852 0.7852032 381 P16989;P16989-2;P16989-3;H0YG22 YBX3 Y-box-binding protein 3 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 1 46.043 47.296 3 5.245E-08 10761 Miao_Sh-H9_proteinG_mass3_141226_03 92.039 70.979 2625.4 344.24 296.11 326.27 0 41.126 0 0 922.6 0 0 695.03 0 427 381 421 4025;4026;4027;4028;4029;4030;4031 4557;4558 4558 2 DHAVVVGVYRPPPK Unmodified 1532.8463 0.8463469 394 P22087 FBL rRNA 2'-O-methyltransferase fibrillarin yes yes 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 2 42.322 44.002 3;4 0.0020401 4905 Miao_Sh-H9_Flag_mass3_141226_01 69.352 45.896 3516.4 0 0 0 268.85 0 0 282.4 0 0 1025.4 472.95 1466.8 428 394 422 4032;4033;4034;4035;4036;4037;4038 4559;4560;4561 4559 3 DHGGALGPEEFK Unmodified 1255.5833 0.5833155 283 O43707;O43707-2;F5GXS2;O43707-3 ACTN4 Alpha-actinin-4 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 2 1 45.242 46.746 2 0.0019287 10916 Miao_Sh-H9_proteinG_mass3_141226_02 74.78 39.128 0 0 0 0 0 0 0 0 0 0 0 0 0 429 283 423 4039;4040;4041 4562;4563;4564 4564 3 DHNIPGELER Unmodified 1178.568 0.56799978 434 P35580;P35580-3 MYH10 Myosin-10 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 2 1 2 1 3 39.877 43.16 2;3 0.00061442 8864 Miao_Sh-c_proteinG_mass3_141226_03 101.48 62.699 9700.2 0 0 0 0 0 4680.7 173.1 0 0 0 2122.8 2723.7 430 434 424 4042;4043;4044;4045;4046;4047;4048;4049;4050 4565;4566;4567;4568;4569;4570;4571;4572;4573;4574 4565 10 DHQYQFLEDAVR Unmodified 1519.7056 0.7055559 560 Q13263;Q13263-2;M0R2I3;M0R3C0 TRIM28 Transcription intermediary factor 1-beta yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 2 1 1 1 1 1 1 65.439 66.999 3 0.027827 10948 Miao_Sh-c_Flag_mass3_141226_01 43.798 21.742 12391 974.89 1042.8 747.73 1008.4 0 1913.2 0 0 789.65 1340 2341.9 2232.3 431 560 425 4051;4052;4053;4054;4055;4056;4057;4058;4059;4060 4575;4576 4575 2 DHTLEDEDVIQIVK Unmodified 1652.8257 0.82573061 674 Q9Y295 DRG1 Developmentally-regulated GTP-binding protein 1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 66.968 69.324 3 0.035345 19083 Miao_Sh-H9_proteinG_mass3_141226_03 41.621 30.362 0 0 0 0 0 0 0 0 0 0 0 0 0 432 674 426 4061 4577 4577 1 DICNDVLSLLEK Unmodified 1417.7123 0.71228076 523 P63104;E7EX29;B0AZS6;E7ESK7 YWHAZ 14-3-3 protein zeta/delta yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 107.08 104.56 2 0.0015183 26141 Miao_Sh-c_proteinG_mass3_141226_02 91.62 53.652 0 0 0 0 0 0 0 0 0 0 0 0 0 433 523 427 4062;4063;4064;4065;4066 4578;4579;4580;4581;4582 4579 5 DIDEVSSLLR Unmodified 1145.5928 0.59281755 469 P50990;P50990-2;P50990-3;H7C4C8 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 2 2 2 3 1 71.579 67.81 2 5.8275E-10 21358 Miao_Sh-H9_proteinG_mass3_141226_03 147.73 109.92 26975 1021 4795.8 0 0 0 4167 0 4181.5 3568.1 4573.1 1017.4 3651.1 434 469 428 4067;4068;4069;4070;4071;4072;4073;4074;4075;4076;4077;4078;4079;4080 4583;4584;4585;4586;4587;4588;4589;4590;4591;4592;4593;4594 4592 12 DIEDVFYK Unmodified 1027.4862 0.48622722 234 Q07955;J3KTL2;Q07955-3;Q07955-2;J3QQV5;J3KSW7 SRSF1 Serine/arginine-rich splicing factor 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 1 1 2 2 1 1 73.265 68.919 2 0.032223 18410 Miao_Sh-c_proteinG_mass3_141226_03 73.26 39.522 10553 1064.6 0 0 1083.1 0 6630.7 0 0 0 1527.3 247.36 0 435 234 429 4081;4082;4083;4084;4085;4086;4087;4088 4595;4596;4597 4596 3 DIENQYETQITQIEHEVSSSGQEVQSSAK Unmodified 3263.5066 0.5065879 432 P35527;CON__P35527;K7EQQ3 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 2 1 1 1 101.82 95.87 3;4 2.6118E-61 34898 Miao_Sh-H9_proteinG_mass3_141226_02 145.19 127.43 159970 2538.8 0 0 67379 0 0 0 0 0 30025 32012 28011 + 436 432 430 4089;4090;4091;4092;4093;4094;4095;4096 4598;4599;4600;4601;4602;4603;4604;4605;4606;4607;4608;4609;4610;4611;4612;4613;4614;4615;4616;4617;4618;4619 4610 22 DIFQEIYDK Unmodified 1169.5605 0.56045479 298 O75874 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 97.511 85.33 2 0.056789 30290 Miao_Sh-H9_proteinG_mass3_141226_01 52.579 14.275 0 0 0 0 0 0 0 0 0 0 0 0 0 437 298 431 4097 4620 4620 1 DIICQIAYAR Unmodified 1221.6176 0.61759251 457 P46777;Q5T7N0 RPL5 60S ribosomal protein L5 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 68.983 69.885 2 5.8012E-10 19552 Miao_Sh-H9_proteinG_mass3_141226_02 147.74 84.528 11742 0 1377 0 0 0 0 2927 0 0 3173.1 2583.4 1681.3 438 457 432 4098;4099;4100;4101;4102 4621;4622;4623;4624 4622 4 DIIHDPGR Unmodified 921.46683 0.46682918 521 P62917;E9PKZ0;G3V1A1;E9PKU4 RPL8 60S ribosomal protein L8 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 35.77 36.531 2 0.036088 7725 Miao_Sh-H9_proteinG_mass3_141226_01 71.379 40.15 6826.3 0 0 0 0 0 0 243.8 0 285.15 2246.7 2053.3 1997.3 439 521 433 4103;4104;4105;4106;4107 4625;4626;4627;4628 4625 4 DIINEEEVQFLK Unmodified 1475.7508 0.75077476 466 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 83.799 84.199 2 0.002267 17747 Miao_Sh-H9_Flag_mass3_141226_01 73.881 40.793 0 0 0 0 0 0 0 0 0 0 0 0 0 440 466 434 4108;4109 4629;4630 4630 2 DIIRAVGAYSK Unmodified 1191.6612 0.66117189 106 CON__P15636 yes yes 0 0 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 1 52.955 54.158 2;3 0.0043604 6666 Miao_Sh-c_Flag_mass3_141226_03 85.973 46.348 15767 654.67 0 4145 3239.6 5320.4 0 0 2407.7 0 0 0 0 + 441 106 435 4110;4111;4112;4113;4114;4115 4631;4632;4633;4634;4635;4636;4637;4638 4632 8 DIISIAEDEDLR Unmodified 1387.6831 0.68308912 363 P12956;B1AHC8;B1AHC9;F5H1I8 XRCC6 X-ray repair cross-complementing protein 6 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 87.196 79.697 2 0.0010465 16098 Miao_Sh-H9_Flag_mass3_141226_01 81.709 38.029 0 0 0 0 0 0 0 0 0 0 0 0 0 442 363 436 4116;4117;4118;4119;4120 4639;4640;4641;4642;4643 4640 5 DIKPDNLLLDSK Unmodified 1369.7453 0.74529545 577 Q15208 STK38 Serine/threonine-protein kinase 38 yes yes 0 0 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 2 1 2 1 1 2 1 1 59.217 59.634 3 0.00051438 10768 Miao_Sh-H9_Flag_mass3_141226_02 106.32 79.537 17087 693.4 1632.8 625.3 936.86 0 0 997.11 5897.6 3891 0 0 2412.8 443 577 437 4121;4122;4123;4124;4125;4126;4127;4128;4129;4130;4131 4644;4645;4646;4647;4648 4647 5 DILIQYDR Unmodified 1034.5397 0.53965977 259 P62249;M0R210 RPS16 40S ribosomal protein S16 yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 3 1 2 2 1 1 1 2 2 64.522 63.487 2 7.414E-12 15783 Miao_Sh-H9_proteinG_mass3_141226_02 141.48 83.891 58380 1340.4 0 1318.9 2574.9 3502.3 14665 0 425.36 4434.6 12950 2493.2 14675 444 259 438 4132;4133;4134;4135;4136;4137;4138;4139;4140;4141;4142;4143;4144;4145;4146;4147 4649;4650;4651;4652;4653;4654;4655;4656;4657;4658;4659;4660;4661;4662;4663;4664 4661 16 DILQNVFK Unmodified 975.53893 0.53893149 454 P46063;F5H4P4;F5H3W0;F5H2L2;F8WA66;F8WD97 RECQL ATP-dependent DNA helicase Q1 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 73.27 67.773 2 0.0076069 21351 Miao_Sh-c_proteinG_mass3_141226_03 95.909 48.828 5138.5 0 0 0 0 0 1653 0 0 1478 2007.5 0 0 445 454 439 4148;4149;4150;4151;4152 4665;4666;4667 4666 3 DILVEADSLWVVK Unmodified 1485.8079 0.80789571 577 Q15208 STK38 Serine/threonine-protein kinase 38 yes yes 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 98.853 98.753 2 0.00016174 23509 Miao_Sh-H9_Flag_mass3_141226_02 84.297 37.453 0 0 0 0 0 0 0 0 0 0 0 0 0 446 577 440 4153;4154 4668;4669 4669 2 DINELNLPK Unmodified 1054.5659 0.56587452 491 P61081 UBE2M NEDD8-conjugating enzyme Ubc12 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 54.591 60.356 2 0.022365 14871 Miao_Sh-c_proteinG_mass3_141226_03 67.334 21.966 0 0 0 0 0 0 0 0 0 0 0 0 0 447 491 441 4155 4670 4670 1 DIPGLTDTTVPR Unmodified 1283.6721 0.67213051 512 P62753;A2A3R5 RPS6 40S ribosomal protein S6 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 3 1 2 2 1 2 2 1 2 1 2 3 62.582 64.315 2;3 5.667E-07 17031 Miao_Sh-H9_proteinG_mass3_141226_03 127.52 97.715 97968 388.33 4695.2 0 9137.5 8543.8 23540 8104 10783 10529 0 18300 3946.7 448 512 442 4156;4157;4158;4159;4160;4161;4162;4163;4164;4165;4166;4167;4168;4169;4170;4171;4172;4173;4174;4175;4176;4177 4671;4672;4673;4674;4675;4676;4677;4678;4679;4680;4681;4682;4683;4684;4685;4686;4687;4688;4689;4690;4691;4692;4693;4694 4694 23 DIQTLLSR Unmodified 944.5291 0.52909508 456 P46379;P46379-2;P46379-3;P46379-4;P46379-5;F6S6P2;X6REW1;F6UR09;F6U1F2;F6XTU0;F6RG75;X6RCT4;F6WML8;F6VEM6;F6X9W3;F6U341 BAG6 Large proline-rich protein BAG6 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 66.377 66.352 2 0.032889 11885 Miao_Sh-H9_Flag_mass3_141226_03 72.879 17.375 2539.5 848.67 0 0 0 0 0 0 0 1690.8 0 0 0 449 456 443 4178;4179 4695 4695 1 DISEASVFDAYVLPK Unmodified 1652.8298 0.82975336 516 P62854 RPS26 40S ribosomal protein S26 yes yes 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 3 1 1 3 105.2 98.401 2;3 2.4392E-08 21096 Miao_Sh-c_proteinG_mass3_141226_01 103.79 89.359 18866 1014 651.66 1297.7 0 0 0 0 0 1216.3 5287.6 6626.7 2772.4 450 516 444 4180;4181;4182;4183;4184;4185;4186;4187;4188;4189;4190;4191;4192;4193 4696;4697;4698;4699;4700;4701;4702;4703;4704 4697 9 DISLSDYK Unmodified 939.45493 0.45492709 545 Q06830 PRDX1 Peroxiredoxin-1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 54.056 54.707 2 0.025467 14193 Miao_Sh-H9_proteinG_mass3_141226_01 69.598 22.024 0 0 0 0 0 0 0 0 0 0 0 0 0 451 545 445 4194 4705 4705 1 DITPLQVVLPNTALHLK Unmodified 1871.088 0.088033731 573 Q14764;H3BQK6;H3BRL2 MVP Major vault protein yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 3 1 3 1 9 11 1 102.3 95.797 2;3;4 8.4609E-28 36268 Miao_Sh-c_proteinG_mass3_141226_03 154.88 140 338750 0 885.2 0 69654 40338 50786 1897.9 0 0 81352 49838 44003 452 573 446 4195;4196;4197;4198;4199;4200;4201;4202;4203;4204;4205;4206;4207;4208;4209;4210;4211;4212;4213;4214;4215;4216;4217;4218;4219;4220;4221;4222;4223;4224 4706;4707;4708;4709;4710;4711;4712;4713;4714;4715;4716;4717;4718;4719;4720;4721;4722;4723;4724;4725;4726;4727;4728;4729;4730;4731;4732;4733;4734;4735;4736;4737;4738;4739;4740;4741;4742;4743;4744;4745;4746;4747;4748;4749;4750;4751 4721 46 DITYFIQQLLR Unmodified 1408.7715 0.77145062 48 P61158;B4DXW1;Q9P1U1;F5H3P5;Q9P1U1-2;Q9C0K3;H7C4J1;C9IZN3;Q9P1U1-3 ACTR3;ACTR3B;ACTR3C Actin-related protein 3;Actin-related protein 3B;Actin-related protein 3C yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching 1 1 2 1 2 1 115.9 117.25 2 1.4609E-24 27566 Miao_Sh-c_Flag_mass3_141226_01 158.94 129.4 16243 0 3590.3 0 0 4750.6 0 2798.2 4465 639.15 0 0 0 453 48 447 4225;4226;4227;4228;4229;4230;4231;4232 4752;4753;4754;4755;4756 4752 5 DIVINEAIYMSAKPR Unmodified 1718.9025 0.90254115 214 H0YLD0 PIGH yes yes 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 80.543 72.032 3 0.0043585 25017 Miao_Sh-H9_proteinG_mass3_141226_01 64.104 31.809 19846 0 1714.8 0 0 0 2476.5 0 0 9775.6 5401.9 0 476.89 454 214 448 4233;4234;4235;4236;4237 4757 4757 0 DIVQFVPFR Unmodified 1119.6077 0.60767976 125 O75131;Q86YQ8;Q9UBL6;Q96FN4;Q8IYJ1;Q96A23;Q9HCH3;E7ENV7;Q86VY2;Q7Z6C8;Q719H8;O95741;Q9UBL6-2;Q96A23-2;O95741-2 CPNE3;CPNE8;CPNE7;CPNE2;CPNE9;CPNE4;CPNE5;CPNE6 Copine-3;Copine-8;Copine-7;Copine-2;Copine-9;Copine-4;Copine-5;Copine-6 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching 2 1 3 3 1 1 2 1 2 1 87.062 85.658 2 6.9423E-08 18598 Miao_Sh-c_proteinG_mass3_141226_01 126.07 81.718 12857 2723.1 0 3553.2 1318.1 1357.6 421.55 0 2452.2 616.56 0 414.54 0 455 125 449 4238;4239;4240;4241;4242;4243;4244;4245;4246;4247;4248;4249;4250;4251;4252;4253;4254 4758;4759;4760;4761;4762;4763;4764;4765;4766;4767;4768;4769 4763 12 DLADELALVDVIEDK Unmodified 1656.8458 0.84579735 309 P00338;P00338-3;P00338-2;P00338-5;P00338-4;F5GXY2;F5GYU2;F5GXH2;F5GZQ4;F5H5J4;F5H6W8 LDHA L-lactate dehydrogenase A chain yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 2 2 1 1 1 107.08 105.8 2;3 1.2049E-10 26034 Miao_Sh-H9_Flag_mass3_141226_03 130.29 95.545 19359 0 1471.9 0 3089.8 0 0 5231.5 2520.3 5351.9 0 1693.8 0 456 309 450 4255;4256;4257;4258;4259;4260;4261;4262;4263 4770;4771;4772;4773;4774;4775;4776;4777;4778;4779;4780;4781;4782;4783 4783 14 DLAGSIIGK Unmodified 872.49673 0.49673232 494 P61978;P61978-2;Q5T6W5;P61978-3;S4R359 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 55.778 58.672 2 0.0020091 14708 Miao_Sh-H9_proteinG_mass3_141226_03 100.02 26.352 28253 0 0 0 0 0 6614 0 0 0 8548.2 7087.1 6003.5 457 494 451 4264;4265;4266;4267 4784;4785;4786;4787;4788;4789;4790 4790 7 DLALGLVPGDR Unmodified 1124.619 0.61897272 227 Q92614;Q92614-4;J3KNX9;Q92614-3 MYO18A Unconventional myosin-XVIIIa yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 72.179 70.214 2 0.014015 19890 Miao_Sh-H9_proteinG_mass3_141226_03 65.179 37.698 4943 843.1 1011.3 0 0 0 0 0 0 1347.6 269.74 0 1471.3 458 227 452 4268;4269;4270;4271;4272 4791 4791 1 DLAQALINR Unmodified 1012.5665 0.56654322 455 P46087;P46087-2;P46087-4;P46087-3;F5GYR3 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 2 1 2 1 1 69.28 67.454 2 0.00025823 18596 Miao_Sh-H9_proteinG_mass3_141226_01 122.33 88.24 9839 0 0 0 0 0 1334.5 1936.9 983.84 0 3334.8 2248.9 0 459 455 453 4273;4274;4275;4276;4277;4278;4279;4280 4792;4793;4794;4795;4796;4797 4794 6 DLAVAGPEMQVK Oxidation (M) 1272.6384 0.63838754 573 Q14764 MVP Major vault protein yes yes 0 0 1 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 43.105 44.584 2 2.3152E-08 10684 Miao_Sh-H9_proteinG_mass3_141226_03 98.105 73.252 2650.3 24.227 0 0 0 0 0 0 0 0 0 0 2626.1 460 573 454 4281;4282 4798 4798 72 0 DLDEDELLGNLSETELK Unmodified 1931.9211 0.92114714 657 Q9NYL9;H0YNU8 TMOD3 Tropomodulin-3 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 93.178 87.815 2;3 0.0033357 19852 Miao_Sh-c_proteinG_mass3_141226_02 50.376 35.931 1705.1 0 0 0 447.83 0 0 0 0 0 1257.3 0 0 461 657 455 4283;4284;4285;4286 4799;4800;4801 4799 3 DLDITSPELR Unmodified 1157.5928 0.59281755 167 P19474;F5H012;P19474-2 TRIM21 E3 ubiquitin-protein ligase TRIM21 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching 3 1 2 1 2 1 1 2 1 62.231 63.484 2 1.4212E-06 9795 Miao_Sh-c_Flag_mass3_141226_02 138.22 80.36 38244 604.8 5869.1 6613.4 308.88 1196.2 0 10426 11475 0 900.71 0 850.02 462 167 456 4287;4288;4289;4290;4291;4292;4293;4294;4295;4296;4297;4298;4299;4300 4802;4803;4804;4805;4806;4807 4804 6 DLEAHIDSANK Unmodified 1211.5782 0.57823012 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 2 1 1 1 2 2 2 2 38.083 39.375 2;3 7.3063E-91 7469 Miao_Sh-c_proteinG_mass3_141226_03 219.33 158.44 83693 761.49 992.1 270.87 886.35 536.96 8941.3 773.69 723.68 1010 26826 21814 20156 463 433 457 4301;4302;4303;4304;4305;4306;4307;4308;4309;4310;4311;4312;4313;4314;4315;4316;4317;4318 4808;4809;4810;4811;4812;4813;4814;4815;4816;4817;4818;4819;4820;4821;4822;4823;4824;4825;4826;4827;4828;4829;4830;4831;4832;4833;4834;4835;4836;4837;4838;4839;4840;4841;4842 4818 34 DLEALLNSK Unmodified 1001.5393 0.53932542 312 P02545;P02545-2;P02545-6;P02545-3;Q5TCI8;P02545-5;P02545-4;H0YAB0 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 71.288 74.396 2 0.0031104 19429 Miao_Sh-c_proteinG_mass3_141226_03 92.538 48.731 860.86 0 0 0 0 0 0 0 0 0 0 860.86 0 464 312 458 4319;4320;4321 4843;4844;4845 4843 3 DLEAQIEAANK Unmodified 1200.5986 0.59863121 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 1 1 1 55.746 58.77 2 0.0012366 14380 Miao_Sh-c_proteinG_mass3_141226_03 114.02 24.118 66222 0 0 0 0 0 17153 0 0 0 24338 0 24731 465 434 459 4322;4323;4324 4846;4847;4848 4847 3 DLEFTIYDDDDVSPFLEGLEERPQR Unmodified 2997.388 0.38797632 160 P25786;F5GX11;P25786-2 PSMA1 Proteasome subunit alpha type-1 yes no 0 0 0 0 1 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 102.43 103.74 3 4.2552E-41 22569 Miao_Sh-c_Flag_mass3_141226_03 120.32 105.9 0 0 0 0 0 0 0 0 0 0 0 0 0 466 160 460 4325 4849 4849 1 DLEGENIEIVFAKPPDQK Unmodified 2041.0368 0.036786022 286 O60506-4;O60506-3;O60506;O60506-2;O60506-5 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes no 0 0 0 0 1 By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 2 3 2 1 2 1 89.166 87.182 3 1.5729E-06 33079 Miao_Sh-H9_proteinG_mass3_141226_02 96.447 58.479 16620 0 0 0 1655.2 5450.6 932.71 695.58 1733 0 0 6152.7 0 467 286 461 4326;4327;4328;4329;4330;4331;4332;4333;4334;4335;4336;4337 4850;4851;4852;4853;4854;4855;4856;4857 4857 8 DLEGLSQR Unmodified 916.46141 0.46140945 433 P35579 MYH9 Myosin-9 yes yes 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1 42.139 43.781 2 1.6008E-05 9455 Miao_Sh-H9_proteinG_mass3_141226_03 148.14 67.915 43984 0 1134.1 1033.1 1368 1370.3 0 1051.8 0 0 13780 12642 11605 468 433 462 4338;4339;4340;4341;4342;4343;4344;4345;4346 4858;4859;4860;4861;4862;4863;4864;4865;4866;4867;4868;4869;4870;4871;4872 4871 15 DLFEDELVPLFEK Unmodified 1592.7974 0.7973906 286 O60506-4;O60506-3;O60506;O60506-2;O60506-5;F6UXX1 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 1 2 1 2 2 109.37 104.92 2 7.4902E-05 39229 Miao_Sh-H9_proteinG_mass3_141226_02 93.243 67.77 7978.3 2175 0 0 0 1073.6 0 0 0 0 0 0 4729.7 469 286 463 4347;4348;4349;4350;4351;4352;4353;4354 4873;4874;4875;4876;4877;4878;4879 4877 7 DLFQVAFNR Unmodified 1108.5665 0.56654322 568 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 81.64 81.991 2 0.0022071 15614 Miao_Sh-c_Flag_mass3_141226_02 95.502 59.106 0 0 0 0 0 0 0 0 0 0 0 0 0 470 568 464 4355 4880 4880 1 DLGEELEALK Unmodified 1115.571 0.57101948 433 P35579 MYH9 Myosin-9 no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 2 2 1 1 3 1 3 81.341 78.665 1;2 8.5887E-34 28915 Miao_Sh-H9_proteinG_mass3_141226_02 185.96 126.81 242070 12493 13220 15199 48382 20048 0 21230 17187 0 0 47269 47038 471 433 465 4356;4357;4358;4359;4360;4361;4362;4363;4364;4365;4366;4367;4368;4369;4370;4371;4372;4373;4374 4881;4882;4883;4884;4885;4886;4887;4888;4889;4890;4891;4892;4893;4894;4895;4896;4897;4898;4899;4900;4901;4902;4903;4904;4905;4906;4907;4908;4909;4910;4911;4912;4913;4914;4915;4916;4917;4918;4919;4920;4921;4922;4923;4924 4912 44 DLGLPTEAYISVEEVHDDGTPTSK Unmodified 2572.2181 0.21805744 218 P51665;H3BNT7;H3BTM8;B4DXI8 PSMD7 26S proteasome non-ATPase regulatory subunit 7 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 82.224 81.973 3 0.015822 17649 Miao_Sh-H9_Flag_mass3_141226_03 32.896 23.633 0 0 0 0 0 0 0 0 0 0 0 0 0 472 218 466 4375 4925 4925 1 DLGTESQIFISR Unmodified 1364.6936 0.69359423 135 P50395;E7EU23;P50395-2 GDI2 Rab GDP dissociation inhibitor beta yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 69.093 68.867 2 0.0021193 13401 Miao_Sh-H9_Flag_mass3_141226_01 91.28 56.588 3336.1 839.25 0 0 0 0 0 2496.8 0 0 0 0 0 473 135 467 4376;4377 4926 4926 1 DLINLAK Unmodified 785.4647 0.46470391 394 P22087;M0R0P1;M0R299;M0QXL5;M0R2Q4 FBL rRNA 2'-O-methyltransferase fibrillarin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 1 2 1 57.202 58.631 2 0.020573 15822 Miao_Sh-H9_proteinG_mass3_141226_01 84.699 23.204 6106.9 0 0 0 0 0 0 0 0 0 3575.5 2531.3 0 474 394 468 4378;4379;4380;4381 4927;4928;4929;4930 4929 4 DLLDLLVEAK Unmodified 1127.6438 0.64379049 267 O00571;O00571-2;O15523;B4DXX7 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 1 114.01 103.75 2 0.001241 24986 Miao_Sh-H9_Flag_mass3_141226_03 112.13 42.101 4696.9 1295.7 0 0 0 0 2040.7 0 0 0 0 0 1360.5 475 267 469 4382;4383;4384;4385;4386 4931;4932;4933 4932 3 DLLEVADVLEK Unmodified 1242.6707 0.67073352 650 Q9HAV7 GRPEL1 GrpE protein homolog 1, mitochondrial yes yes 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 3 2 1 105.62 96.211 2 0.0032689 35402 Miao_Sh-H9_proteinG_mass3_141226_02 92.19 39.464 11286 0 0 0 0 2515.7 517.25 0 0 0 1152 4042.3 3058.4 476 650 470 4387;4388;4389;4390;4391;4392;4393;4394 4934;4935;4936;4937;4938;4939 4937 6 DLLFQALGR Unmodified 1031.5764 0.57637963 653 Q9NSD9 FARSB Phenylalanine--tRNA ligase beta subunit yes yes 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching 1 1 82.267 84.547 2 0.010305 18436 Miao_Sh-H9_Flag_mass3_141226_02 79.474 22.193 0 0 0 0 0 0 0 0 0 0 0 0 0 477 653 471 4395;4396 4940;4941 4941 2 DLLHPSPEEEK Unmodified 1292.6248 0.62484596 448 P42677;Q5T4L4 RPS27 40S ribosomal protein S27 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching 2 1 1 2 1 2 2 1 1 2 44.26 45.699 2;3 0.0028331 9493 Miao_Sh-c_proteinG_mass3_141226_03 76.165 54.792 11181 678.12 479.66 483.87 368.24 652.15 5095.3 1132.2 1095 961.48 235.02 0 0 478 448 472 4397;4398;4399;4400;4401;4402;4403;4404;4405;4406;4407;4408;4409;4410;4411 4942;4943;4944;4945;4946;4947 4944 6 DLLLDPAWEK Unmodified 1198.6234 0.6233894 283;362 O43707;O43707-2;F5GXS2;O43707-3;P35609;P35609-2;Q08043;K7EP19;D6RH00;P12814;P12814-2;P12814-3;P12814-4 ACTN4;ACTN2;ACTN3;ACTN1 Alpha-actinin-4;Alpha-actinin-2;Alpha-actinin-3;Alpha-actinin-1 no no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 76.576 80.837 2 0.029333 16693 Miao_Sh-c_proteinG_mass3_141226_02 59.198 20.236 0 0 0 0 0 0 0 0 0 0 0 0 0 479 283;362 473 4412 4948 4948 1 DLLLTSSYLSDSGSTGEHTK Unmodified 2110.0066 0.0066081055 165 P08195;P08195-3;F5GZS6;J3KPF3;P08195-2;P08195-4;H0YFX4 SLC3A2 4F2 cell-surface antigen heavy chain yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 69.591 69.641 3 1.0906E-06 13248 Miao_Sh-H9_Flag_mass3_141226_03 67.928 47.879 0 0 0 0 0 0 0 0 0 0 0 0 0 480 165 474 4413 4949 4949 1 DLLQIIFSFSK Unmodified 1309.7282 0.72818882 449 P42704;B8ZZ38;C9JCA9 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 1 120.44 118.87 2 0.0037035 28218 Miao_Sh-c_Flag_mass3_141226_01 90.005 49.674 14249 5126.3 0 3296.3 0 0 0 2315.2 0 3482 0 29.19 0 481 449 475 4414;4415;4416;4417;4418;4419;4420 4950;4951;4952;4953;4954;4955 4950 6 DLPEHAVLK Unmodified 1020.5604 0.56039521 536 Q00839;Q00839-2 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 41.792 43.521 2 0.02372 9946 Miao_Sh-H9_proteinG_mass3_141226_02 68.846 28.068 3587.8 0 0 0 0 0 0 0 0 0 443.45 3144.3 0 482 536 476 4421;4422 4956 4956 1 DLSEELEALK Unmodified 1145.5816 0.58158416 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 2 1 1 1 3 3 2 2 1 2 86.939 81.106 2 7.0204E-07 16676 Miao_Sh-H9_Flag_mass3_141226_01 130.79 74.53 53668 0 4693.7 6070 7192.6 7137.6 8754.1 1023.3 0 7101.9 798.14 0 10897 483 434 477 4423;4424;4425;4426;4427;4428;4429;4430;4431;4432;4433;4434;4435;4436;4437;4438;4439;4440 4957;4958;4959;4960;4961;4962;4963;4964;4965;4966;4967;4968;4969;4970;4971 4962 14 DLSSEELAAFQK Unmodified 1336.6511 0.65106071 679 Q9Y3B7;Q9Y3B7-2 MRPL11 39S ribosomal protein L11, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 69.39 69.541 2 0.00048307 20132 Miao_Sh-H9_proteinG_mass3_141226_01 116.03 92.557 2381.6 0 0 0 0 0 0 0 0 0 2381.6 0 0 484 679 478 4441;4442;4443 4972;4973;4974 4973 3 DLTDYLMK Unmodified 997.47903 0.47903335 524;528;589 P63261;P60709;I3L3I0;I3L1U9;I3L4N8;P63267-2;P68133;P68032;P63267;P62736;Q5T8M7;Q562R1 ACTG1;ACTB;ACTG2;ACTA1;ACTC1;ACTA2;ACTBL2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2 no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1 2 1 74.715 74.164 2 0.0013982 21453 Miao_Sh-H9_proteinG_mass3_141226_02 107.29 41.222 56142 2532.4 4258 2389.8 5046.1 0 0 14071 10889 5077.2 5414 3189.2 3276.1 485 524;528;589 479 4444;4445;4446;4447;4448;4449;4450;4451;4452;4453;4454;4455 4975;4976;4977;4978;4979;4980;4981;4982;4983;4984;4985;4986;4987 4985 13 DLTDYLMK Oxidation (M) 1013.4739 0.47394797 524;528;589 P63261;P60709;I3L3I0;I3L1U9;I3L4N8;P63267-2;P68133;P68032;P63267;P62736;Q5T8M7;Q562R1 ACTG1;ACTB;ACTG2;ACTA1;ACTC1;ACTA2;ACTBL2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2 no no 0 0 1 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 1 2 71.457 64.064 2 0.0057508 16705 Miao_Sh-H9_proteinG_mass3_141226_03 101.43 47.463 5964 0 0 0 0 0 0 0 0 0 0 4648.8 1315.2 486 524;528;589 479 4456;4457;4458 4988;4989;4990;4991;4992 4992 65 5 DLTEYLSR Unmodified 995.49238 0.49237523 271 O14979;O14979-3;O14979-2 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 64.832 66.286 2 0.0044031 18829 Miao_Sh-H9_proteinG_mass3_141226_01 106.91 52.754 5917.9 0 0 0 0 0 0 0 0 0 3358.8 0 2559.1 487 271 480 4459;4460 4993;4994 4993 2 DLTTAGAVTQCYR Unmodified 1454.6824 0.68237762 258 Q02543;M0R3D6;M0R1A7;M0R117;M0R0P7 RPL18A 60S ribosomal protein L18a yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 2 2 1 4 1 1 2 1 2 51.844 53.523 2;3 2.4205E-132 12487 Miao_Sh-c_proteinG_mass3_141226_03 225.79 171.02 38712 75.796 0 132.98 2334.7 344.41 3450.7 0 1225.2 4207.2 15840 8215.2 2885.6 488 258 481 4461;4462;4463;4464;4465;4466;4467;4468;4469;4470;4471;4472;4473;4474;4475;4476;4477 4995;4996;4997;4998;4999;5000;5001;5002;5003;5004;5005;5006;5007 4998 13 DLVEAVAHILGIR Unmodified 1404.8089 0.80889876 464 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 1 115.4 117.22 3 0.0021209 31162 Miao_Sh-c_proteinG_mass3_141226_02 63.091 45.018 2811.7 489.22 0 1244.1 0 1078.4 0 0 0 0 0 0 0 489 464 482 4478;4479;4480 5008 5008 1 DLVILLYETALLSSGFSLEDPQTHANR Unmodified 3001.5397 0.53966635 341 P07900;P07900-2 HSP90AA1 Heat shock protein HSP 90-alpha yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 119.56 119.76 3;4 2.3554E-09 32006 Miao_Sh-c_proteinG_mass3_141226_01 64.035 57.241 6937.9 0 0 0 0 0 0 3661.1 0 3276.8 0 0 0 490 341 483 4481;4482;4483 5009;5010;5011 5009 2 DLVSSLTSGLLTIGDR Unmodified 1645.8887 0.88866522 476 P53396;P53396-2;B4E3P0 ACLY ATP-citrate synthase yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching 1 1 3 1 111.84 112.81 2;3 8.3248E-09 27535 Miao_Sh-H9_Flag_mass3_141226_01 95.197 62.581 5631.4 773.85 0 0 0 1254.2 0 2040.2 0 1563.1 0 0 0 491 476 484 4484;4485;4486;4487;4488;4489 5012;5013;5014;5015;5016 5015 5 DLVVLLFETALLSSGFSLEDPQTHSNR Unmodified 2987.524 0.52401629 344 P08238 HSP90AB1 Heat shock protein HSP 90-beta yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 3 1 1 1 122.18 123.31 3;4 5.0253E-51 29823 Miao_Sh-c_Flag_mass3_141226_01 144.29 135.61 47219 9494.7 10903 13419 9808.3 3594.2 0 0 0 0 0 0 0 492 344 485 4490;4491;4492;4493;4494;4495;4496 5017;5018;5019;5020;5021;5022;5023;5024;5025;5026;5027;5028;5029;5030;5031 5020 14 DLYANTVLSGGTTMYPGIADR Unmodified 2214.0627 0.062683196 524 P63261;P60709 ACTG1;ACTB Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 88.632 84.697 3 3.6627E-05 18057 Miao_Sh-c_proteinG_mass3_141226_02 57.227 44.448 10408 3062.4 0 0 1579.4 0 0 0 3505.8 0 0 0 2260.6 493 524 486 4497;4498;4499;4500;4501 5032;5033;5034;5035 5033 4 DLYANTVLSGGTTMYPGIADR Oxidation (M) 2230.0576 0.057597819 524 P63261;P60709 ACTG1;ACTB Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes no 0 0 1 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 1 1 2 1 82.969 76.172 3 1.0801E-15 26874 Miao_Sh-H9_proteinG_mass3_141226_02 91.276 74.035 0 0 0 0 0 0 0 0 0 0 0 0 0 494 524 486 4502;4503;4504;4505;4506 5036;5037;5038;5039;5040 5040 66 5 DLYEDELVPLFEK Unmodified 1608.7923 0.79230522 281 O43390;O43390-2;O43390-4;O43390-3;B4DT28 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 2 1 1 99.071 98.921 2;3 0.0028851 23139 Miao_Sh-c_proteinG_mass3_141226_02 71.279 45.162 9304.4 1015.4 1401 1637.3 1304.2 3283.4 0 0 0 0 663.04 0 0 495 281 487 4507;4508;4509;4510;4511;4512;4513;4514 5041;5042;5043 5042 3 DNHLLGTFDLTGIPPAPR Unmodified 1933.0058 0.005760665 355 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 8 8 8 9 5 7 4 12 3 6 3 91.705 89.476 3 1.8587E-49 19058 Miao_Sh-H9_Flag_mass3_141226_03 170.79 140.86 164870 10457 19220 27952 10043 4547.5 11474 29169 14908 11365 11804 7448.4 6486.6 496 355 488 4515;4516;4517;4518;4519;4520;4521;4522;4523;4524;4525;4526;4527;4528;4529;4530;4531;4532;4533;4534;4535;4536;4537;4538;4539;4540;4541;4542;4543;4544;4545;4546;4547;4548;4549;4550;4551;4552;4553;4554;4555;4556;4557;4558;4559;4560;4561;4562;4563;4564;4565;4566;4567;4568;4569;4570;4571;4572;4573;4574;4575;4576;4577;4578;4579;4580;4581;4582;4583;4584;4585;4586;4587;4588;4589;4590;4591;4592;4593;4594;4595;4596 5044;5045;5046;5047;5048;5049;5050;5051;5052;5053;5054;5055;5056;5057;5058;5059;5060;5061;5062;5063;5064;5065;5066;5067;5068;5069;5070;5071;5072;5073;5074;5075;5076;5077;5078;5079;5080;5081;5082;5083;5084;5085;5086;5087;5088;5089;5090;5091;5092;5093;5094;5095;5096;5097;5098;5099;5100;5101;5102;5103;5104;5105;5106;5107;5108;5109;5110;5111;5112;5113;5114;5115;5116;5117;5118;5119;5120;5121;5122;5123;5124;5125;5126;5127;5128;5129;5130;5131;5132;5133;5134;5135;5136;5137;5138;5139;5140;5141;5142;5143;5144;5145;5146;5147;5148 5127 105 DNIQGITK Unmodified 887.47125 0.47124585 513 P62805 HIST1H4A Histone H4 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 33.42 34.765 2 0.038659 7143 Miao_Sh-H9_proteinG_mass3_141226_02 70.256 37.646 1795.9 0 0 46.97 279.71 189 0 0 189 0 233.73 857.5 0 497 513 489 4597;4598;4599;4600;4601;4602 5149 5149 1 DNIQGITKPAIR Unmodified 1324.7463 0.7462985 513 P62805 HIST1H4A Histone H4 yes yes 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 44.396 45.537 3 0.057505 10883 Miao_Sh-H9_proteinG_mass3_141226_03 42.475 16.667 9330.6 0 0 0 0 0 0 116.27 0 196.03 0 3713.1 5305.1 498 513 490 4603;4604;4605;4606 5150 5150 0 DNLEFFLAGIGR Unmodified 1350.6932 0.6932003 464 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 2 1 1 1 1 1 1 1 2 2 104.22 99.589 2 0.0017218 24117 Miao_Sh-H9_Flag_mass3_141226_02 93.348 64.392 18749 3233.1 3357 2251.6 0 1768.4 1253.5 722.77 0 0 3501.9 2661.1 0 499 464 491 4607;4608;4609;4610;4611;4612;4613;4614;4615;4616;4617;4618;4619;4620 5151;5152;5153;5154;5155;5156 5155 5 DNNLLGK Unmodified 772.40792 0.40791731 356 P11142;E9PKE3;P11142-2;E9PNE6;A8K7Q2;P54652;E9PS65;E9PM13 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 37.447 36.996 2 0.019677 3607 Miao_Sh-H9_Flag_mass3_141226_03 81.784 33.223 0 0 0 0 0 0 0 0 0 0 0 0 0 500 356 492 4621 5157 5157 1 DNTIEHLLPLFLAQLK Unmodified 1864.0458 0.045834566 20 P30153;B3KQV6;F5H3X9 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 114.31 114.66 3 0.00059021 27095 Miao_Sh-c_Flag_mass3_141226_02 66.059 51.887 0 0 0 0 0 0 0 0 0 0 0 0 0 501 20 493 4622 5158 5158 1 DNYVPEVSALDQEIIEVDPDTK Unmodified 2488.1857 0.18569468 209 P08708;P0CW22;H0YN88;H0YK46 RPS17;RPS17L 40S ribosomal protein S17;40S ribosomal protein S17-like yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 1 1 1 2 2 5 101.75 96.457 2;3 7.7946E-10 33724 Miao_Sh-H9_proteinG_mass3_141226_02 74.308 65.045 40729 649.43 0 5594.1 0 4716.4 4771 2193.4 7390.7 0 6973.4 6130.2 2310.5 502 209 494 4623;4624;4625;4626;4627;4628;4629;4630;4631;4632;4633;4634;4635;4636;4637;4638;4639 5159;5160;5161;5162;5163;5164;5165;5166;5167;5168;5169;5170;5171;5172;5173;5174;5175 5167 16 DPFSFDFFEDPFEDFFGNR Unmodified 2373.9855 0.98547873 74 O75190;O75190-2;C9J2P2;C9J2C4;O75190-4;O75190-3 DNAJB6 DnaJ homolog subfamily B member 6 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 121.55 119.55 3 1.5525E-09 32104 Miao_Sh-H9_Flag_mass3_141226_02 83.404 79.632 3698.5 429.79 0 0 0 0 0 0 2302 923.09 0 43.548 0 503 74 495 4640;4641;4642;4643 5176 5176 1 DPVQEAWAEDVDLR Unmodified 1641.7635 0.76346471 368 P14618;P14618-2;P14618-3;Q504U3 PKM;PKM2 Pyruvate kinase PKM;Pyruvate kinase yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 3 2 1 3 2 1 1 7 1 79.513 79.358 2;3 1.4356E-62 16644 Miao_Sh-H9_Flag_mass3_141226_02 189.32 161.35 47529 4033.1 7882.9 3851 7305.3 7503.1 1082.1 5805.1 5211.2 4854.7 0 0 0 504 368 496 4644;4645;4646;4647;4648;4649;4650;4651;4652;4653;4654;4655;4656;4657;4658;4659;4660;4661;4662;4663;4664 5177;5178;5179;5180;5181;5182;5183;5184;5185;5186;5187;5188;5189;5190;5191;5192;5193;5194;5195;5196;5197;5198;5199;5200;5201;5202;5203;5204;5205;5206;5207;5208;5209;5210;5211 5205 34 DQAVENILVSPVVVASSLGLVSLGGK Unmodified 2550.4269 0.42686843 468 P50454;E9PJH8;E9PIG2;E9PRS3;E9PNX1;E9PK86;E9PMI5;E9PR70;E9PPV6;E9PLA6 SERPINH1 Serpin H1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 117.94 118.39 3 0.0049573 30927 Miao_Sh-H9_Flag_mass3_141226_03 35.97 33.087 0 0 0 0 0 0 0 0 0 0 0 0 0 505 468 497 4665 5212 5212 1 DQAVFPQNGLVVSSVDVQSVEPVDQR Unmodified 2811.4039 0.40390115 573 Q14764 MVP Major vault protein yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 2 1 8 2 88.892 79.657 3 4.5375E-62 27973 Miao_Sh-H9_proteinG_mass3_141226_02 143.32 123.15 124200 0 0 0 33239 0 0 0 0 0 43729 25878 21357 506 573 498 4666;4667;4668;4669;4670;4671;4672;4673;4674;4675;4676;4677;4678 5213;5214;5215;5216;5217;5218;5219;5220;5221;5222;5223;5224;5225;5226;5227;5228;5229;5230;5231;5232;5233;5234;5235;5236 5222 24 DQEGQDVLLFIDNIFR Unmodified 1920.9581 0.95814177 331 P06576;H0YH81;F8W0P7 ATP5B ATP synthase subunit beta, mitochondrial;ATP synthase subunit beta yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 2 1 3 1 2 2 118.66 119.05 2;3 6.49E-11 29098 Miao_Sh-c_Flag_mass3_141226_02 121.45 103.27 22487 5478.4 0 3914.7 3183.6 0 0 3941.9 1958.1 4010.3 0 0 0 507 331 499 4679;4680;4681;4682;4683;4684;4685;4686;4687;4688;4689;4690 5237;5238;5239;5240;5241;5242;5243;5244;5245;5246;5247 5238 11 DQFPEVYVPTVFENYIADIEVDGK Unmodified 2786.3327 0.33269327 151 P08134;Q5JR06;Q5JR07;E9PN11;E9PQH6;Q5JR08;Q5JR05;U3KQA9;U3KQV3;E9PLA2 RHOC Rho-related GTP-binding protein RhoC yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 116.31 117.01 3 0.0013431 27771 Miao_Sh-c_Flag_mass3_141226_03 44.164 37.937 0 0 0 0 0 0 0 0 0 0 0 0 0 508 151 500 4691;4692 5248;5249 5248 2 DQFPEVYVPTVFENYVADIEVDGK Unmodified 2772.317 0.31704321 80 P61586;C9JX21;C9JNR4;C9J1T2;C9JRM1 RHOA Transforming protein RhoA yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 114.94 114.59 3 7.5249E-07 28317 Miao_Sh-H9_Flag_mass3_141226_01 58.812 49.434 0 0 0 0 0 0 0 0 0 0 0 0 0 509 80 501 4693 5250 5250 1 DQGTYEDYVEGLR Unmodified 1543.6791 0.67906638 179;198 P60660;P60660-2;F8W1R7;G3V1V0;B7Z6Z4;G3V1Y7;F8VPF3;F8VZU9;F8W180;H0YI43;J3KND3;G8JLA2 MYL6;PDE6H Myosin light polypeptide 6 no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 4 2 3 4 6 2 5 4 9 6 7 71.698 69.168 2;3 0 24598 Miao_Sh-H9_proteinG_mass3_141226_02 323.24 268.9 1925200 145010 110540 106110 182980 162500 291790 96236 141280 127450 213940 131760 215650 510 179;198 502 4694;4695;4696;4697;4698;4699;4700;4701;4702;4703;4704;4705;4706;4707;4708;4709;4710;4711;4712;4713;4714;4715;4716;4717;4718;4719;4720;4721;4722;4723;4724;4725;4726;4727;4728;4729;4730;4731;4732;4733;4734;4735;4736;4737;4738;4739;4740;4741;4742;4743;4744;4745;4746;4747 5251;5252;5253;5254;5255;5256;5257;5258;5259;5260;5261;5262;5263;5264;5265;5266;5267;5268;5269;5270;5271;5272;5273;5274;5275;5276;5277;5278;5279;5280;5281;5282;5283;5284;5285;5286;5287;5288;5289;5290;5291;5292;5293;5294;5295;5296;5297;5298;5299;5300;5301;5302;5303;5304;5305;5306;5307;5308;5309;5310;5311;5312;5313;5314;5315;5316;5317;5318;5319;5320;5321;5322;5323;5324;5325;5326;5327;5328;5329;5330;5331;5332;5333;5334;5335;5336;5337;5338;5339;5340;5341;5342;5343;5344;5345;5346;5347;5348;5349;5350;5351;5352;5353;5354;5355;5356;5357;5358;5359;5360;5361;5362;5363;5364;5365;5366;5367;5368;5369;5370;5371;5372;5373;5374;5375;5376;5377;5378;5379;5380;5381;5382;5383;5384;5385;5386;5387;5388;5389;5390;5391;5392;5393;5394;5395;5396;5397 5346 147 DQIVDLTVGNNK Unmodified 1314.6779 0.67794416 432 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 2 1 2 2 2 4 1 2 2 3 5 57.353 59.454 2;3 1.4666E-179 14122 Miao_Sh-c_proteinG_mass3_141226_03 260.83 165.98 268680 1479.9 509.2 429.5 1455.4 5131 80520 0 3946.5 0 82057 51966 41184 + 511 432 503 4748;4749;4750;4751;4752;4753;4754;4755;4756;4757;4758;4759;4760;4761;4762;4763;4764;4765;4766;4767;4768;4769;4770;4771;4772;4773 5398;5399;5400;5401;5402;5403;5404;5405;5406;5407;5408;5409;5410;5411;5412;5413;5414;5415;5416;5417 5401 20 DQIYDIFQK Unmodified 1168.5764 0.57643921 488 P60842;J3QL43;J3KT12;P60842-2;J3KTB5;J3QS69;J3QR64;J3KTN0;J3KSZ0 EIF4A1 Eukaryotic initiation factor 4A-I yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS 1 1 2 1 74.063 60.279 2 0.0020128 21478 Miao_Sh-H9_proteinG_mass3_141226_03 99.973 61.223 3755.9 0 0 0 0 0 0 0 0 0 0 0 3755.9 512 488 504 4774;4775;4776;4777;4778 5418;5419;5420;5421;5422;5423 5423 6 DQLEEFK Unmodified 907.42871 0.42871234 370 P14649;F8W1I5 MYL6B Myosin light chain 6B yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 2 44.648 47.385 2 0.019594 10693 Miao_Sh-H9_proteinG_mass3_141226_03 87.639 45.987 11515 0 308.91 356.75 0 0 3907.4 0 0 0 0 3549.6 3392.2 513 370 505 4779;4780;4781;4782;4783;4784 5424;5425;5426 5426 3 DQLIYNLLK Unmodified 1118.6336 0.63356015 309 P00338;P00338-3;P00338-2;P00338-5;P00338-4;F5GXY2;F5GYU2;F5GXH2;F5GZQ4;F5H5J4;F5H6W8;F5H8H6;F5GXC7;F5GWW2;F5GXU1 LDHA L-lactate dehydrogenase A chain yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 2 1 1 2 1 2 1 1 97.164 90.497 2 0.0038253 34341 Miao_Sh-H9_proteinG_mass3_141226_03 89.08 26.004 21421 3093.8 2392.8 3592.5 1052.1 0 3418.4 0 0 0 3778.6 1664 2428.9 514 309 506 4785;4786;4787;4788;4789;4790;4791;4792;4793;4794;4795;4796;4797 5427;5428;5429;5430;5431;5432;5433;5434 5433 8 DQLQTFSEEHPVLLTEAPLNPR Unmodified 2533.2813 0.28126682 47 P61163;F5H3I4;B4DXP9;R4GMT0 ACTR1A Alpha-centractin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 83.073 82.723 3 0.042937 17905 Miao_Sh-H9_Flag_mass3_141226_03 28.299 23.042 0 0 0 0 0 0 0 0 0 0 0 0 0 515 47 507 4798 5435 5435 1 DQLSVLENGVDIVVGTPGR Unmodified 1967.0324 0.032369346 622 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 97.41 97.66 3 0.011113 22246 Miao_Sh-H9_Flag_mass3_141226_01 42.118 35.225 0 0 0 0 0 0 0 0 0 0 0 0 0 516 622 508 4799;4800 5436;5437 5437 2 DQNYPGAIAIHHPNVAEK Unmodified 1972.9755 0.97552317 106 CON__P15636 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 14 13 3 9 3 7 6 5 10 8 18 7 64.866 63.134 2;3;4 4.9958E-49 6834 Miao_Sh-H9_Flag_mass3_141226_03 167.89 107.74 2662700 61334 63964 84568 264540 264810 336710 200510 252730 280980 372340 142190 338050 + 517 106 509 4801;4802;4803;4804;4805;4806;4807;4808;4809;4810;4811;4812;4813;4814;4815;4816;4817;4818;4819;4820;4821;4822;4823;4824;4825;4826;4827;4828;4829;4830;4831;4832;4833;4834;4835;4836;4837;4838;4839;4840;4841;4842;4843;4844;4845;4846;4847;4848;4849;4850;4851;4852;4853;4854;4855;4856;4857;4858;4859;4860;4861;4862;4863;4864;4865;4866;4867;4868;4869;4870;4871;4872;4873;4874;4875;4876;4877;4878;4879;4880;4881;4882;4883;4884;4885;4886;4887;4888;4889;4890;4891;4892;4893;4894;4895;4896;4897;4898;4899;4900;4901;4902;4903 5438;5439;5440;5441;5442;5443;5444;5445;5446;5447;5448;5449;5450;5451;5452;5453;5454;5455;5456;5457;5458;5459;5460;5461;5462;5463;5464;5465;5466;5467;5468;5469;5470;5471;5472;5473;5474;5475;5476;5477;5478;5479;5480;5481;5482;5483;5484;5485;5486;5487;5488;5489;5490;5491;5492;5493;5494;5495;5496;5497;5498;5499;5500;5501;5502;5503;5504;5505;5506;5507;5508;5509;5510;5511;5512;5513;5514;5515;5516;5517;5518;5519;5520;5521;5522;5523;5524;5525;5526;5527;5528;5529;5530;5531;5532;5533;5534;5535;5536;5537;5538;5539;5540;5541;5542;5543;5544;5545;5546;5547;5548;5549;5550;5551;5552;5553;5554;5555;5556;5557;5558;5559;5560;5561;5562;5563;5564;5565;5566;5567;5568;5569;5570;5571;5572;5573;5574;5575;5576;5577;5578;5579;5580;5581;5582;5583;5584;5585;5586;5587;5588;5589;5590;5591;5592;5593;5594;5595;5596;5597;5598;5599;5600;5601;5602;5603;5604;5605;5606;5607;5608;5609;5610;5611;5612;5613;5614;5615;5616;5617;5618;5619;5620;5621;5622;5623;5624;5625;5626;5627;5628;5629;5630;5631;5632;5633 5561 194 DQNYPGAIAIHHPNVAEK GlyGly (K) 2087.0185 0.018450616 106 CON__P15636 yes yes 0 1 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 2 2 1 1 1 3 1 47.41 48.187 3;4 9.3396E-05 6551 Miao_Sh-H9_Flag_mass3_141226_02 63.691 45.278 18076 1227.2 954.24 843.15 1609.9 0 4853 0 4742.7 3845.6 0 0 0 + 518 106 509 4904;4905;4906;4907;4908;4909;4910;4911;4912;4913;4914 5634;5635;5636;5637;5638;5639;5640 5638 7 7 DQNYPGAIAIHHPNVAEKR Unmodified 2129.0766 0.076634197 106 CON__P15636 yes yes 0 0 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 3 1 2 3 1 1 2 2 3 1 1 53.284 52.116 3;4;5 1.4783E-52 5144 Miao_Sh-c_Flag_mass3_141226_01 174.2 151.38 83839 4461.2 4217 5665.7 8725.6 11318 0 5614.6 10293 12653 13960 4687.7 2243.4 + 519 106 510 4915;4916;4917;4918;4919;4920;4921;4922;4923;4924;4925;4926;4927;4928;4929;4930;4931;4932;4933;4934;4935 5641;5642;5643;5644;5645;5646;5647;5648;5649;5650;5651;5652;5653;5654;5655;5656;5657;5658;5659;5660;5661;5662;5663;5664;5665;5666;5667;5668;5669;5670;5671;5672;5673;5674 5643 33 DQTPDENDQVIVK Unmodified 1499.7104 0.71036651 659 Q9NZI8;Q9NZI8-2 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 2 1 1 40.006 44.091 2 8.7851E-05 9064 Miao_Sh-c_proteinG_mass3_141226_03 95.981 62.091 0 0 0 0 0 0 0 0 0 0 0 0 0 520 659 511 4936;4937;4938;4939 5675;5676;5677;5678 5675 4 DQVANSAFVER Unmodified 1234.5942 0.59421454 341 P07900;P07900-2;Q86U12 HSP90AA1 Heat shock protein HSP 90-alpha yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 1 1 2 2 1 1 1 43.584 45.908 2 9.5539E-15 11275 Miao_Sh-H9_proteinG_mass3_141226_01 150.51 111.76 18122 158.69 0 0 0 254.39 6650.9 0 688.06 0 5294.6 0 5075.6 521 341 512 4940;4941;4942;4943;4944;4945;4946;4947;4948;4949;4950;4951 5679;5680;5681;5682;5683;5684;5685;5686;5687;5688 5685 10 DQVTAQEIFQDNHEDGPTAK Unmodified 2242.0138 0.013818748 364 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching 2 1 2 55.677 59.456 3 1.8265E-08 14571 Miao_Sh-c_proteinG_mass3_141226_03 77.221 61.039 12841 0 0 0 0 3682.5 3652.5 0 0 0 0 5505.7 0 522 364 513 4952;4953;4954;4955;4956 5689;5690;5691 5690 3 DRFSAEDEALSNIAR Unmodified 1692.8067 0.80672651 10 Q9Y608;Q9Y608-2;A8MXR0;Q9Y608-4;C9JSU1;C9JJC9;C9JC17;C9J321;C9J0U5 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 yes no 0 0 0 0 1 By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 65.36 67.423 3 7.4611E-30 12118 Miao_Sh-c_proteinG_mass3_141226_02 168.78 138.3 28863 0 0 0 7539.7 4772.7 878.95 2663.7 2984.5 0 0 6348.5 3675.1 523 10 514 4957;4958;4959;4960;4961;4962;4963;4964 5692;5693;5694;5695;5696;5697 5692 5 DRVGVQDFVLLENFTSEAAFIENLR Unmodified 2881.461 0.4610221 171 O00159;O00159-3;I3L168;I3L3F5;I3L4D4;I3L501;I3L3Y6;I3L204;F5H6E2;O00159-2 MYO1C Unconventional myosin-Ic yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 116.57 116.52 3 5.5496E-05 30373 Miao_Sh-H9_Flag_mass3_141226_03 50.986 47.773 0 0 0 0 0 0 0 0 0 0 0 0 0 524 171 515 4965 5698 5698 1 DSETGENIR Unmodified 1019.452 0.45196697 441 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 2 1 2 2 2 1 2 2 2 1 2 27.451 28.317 2 4.3147E-10 6143 Miao_Sh-H9_proteinG_mass3_141226_01 154.05 93.406 8432.2 56.935 13.664 105.47 240.79 193.18 2045.8 70.167 54.522 0 2118.9 1925.2 1607.5 525 441 516 4966;4967;4968;4969;4970;4971;4972;4973;4974;4975;4976;4977;4978;4979;4980;4981;4982;4983;4984 5699;5700;5701;5702;5703;5704;5705 5702 7 DSIVAELDR Unmodified 1016.5138 0.51383895 251 O14579;M0QXB4;O14579-3 COPE Coatomer subunit epsilon yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 62.874 63.696 2 0.014425 17659 Miao_Sh-H9_proteinG_mass3_141226_01 74.267 41.634 4459.5 0 0 967.21 0 0 0 822.14 0 621.73 1152.3 0 896.16 526 251 517 4985;4986;4987;4988;4989 5706 5706 1 DSLIFLVDASK Unmodified 1206.6496 0.64960415 363 P12956;B1AHC8 XRCC6 X-ray repair cross-complementing protein 6 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 2 1 99.993 95.344 2 0.0037543 34297 Miao_Sh-H9_proteinG_mass3_141226_02 92.247 68.397 13896 2239.9 332.64 759.13 0 0 0 0 2449.7 2670.5 2079.9 1831.1 1533.3 527 363 518 4990;4991;4992;4993;4994;4995;4996;4997;4998 5707;5708;5709;5710 5709 4 DSLLQDGEFSMDLR Unmodified 1624.7403 0.74028642 339 P07737;K7EJ44 PFN1 Profilin-1 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 88.803 89.129 2 3.1085E-17 18726 Miao_Sh-H9_Flag_mass3_141226_01 113.25 64.172 2267.8 0 0 664.28 0 0 0 1603.5 0 0 0 0 0 528 339 519 4999;5000;5001 5711;5712 5712 1 DSPSVWAAVPGK Unmodified 1212.6139 0.61388734 339 P07737;I3L3D5;CON__P02584 PFN1 Profilin-1 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 2 1 3 2 2 2 2 61.133 62.51 2;3 4.5428E-26 10856 Miao_Sh-H9_Flag_mass3_141226_02 163.46 133.8 123820 7361.1 342.03 4814.2 8548.5 0 16555 924.93 15242 14657 21962 15883 17525 529 339 520 5002;5003;5004;5005;5006;5007;5008;5009;5010;5011;5012;5013;5014;5015;5016;5017;5018;5019;5020;5021 5713;5714;5715;5716;5717;5718;5719;5720;5721;5722;5723;5724;5725;5726;5727;5728;5729;5730;5731;5732;5733;5734;5735;5736;5737;5738;5739 5726 26 DSTLIMQLLR Unmodified 1188.6536 0.65364367 523;495;427;500;418;544 P63104;E7EX29;B0AZS6;P63104-2;B7Z2E6;H0YB80;P31947;P31947-2;P61981;P31946;P31946-2;P27348;P62258;P62258-2;K7EM20;Q04917 YWHAZ;SFN;YWHAG;YWHAB;YWHAQ;YWHAE;YWHAH 14-3-3 protein zeta/delta;14-3-3 protein sigma;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein theta;14-3-3 protein epsilon;14-3-3 protein eta no no 0 0 0 0 0 By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 99.262 97.791 2 1.8028E-09 22705 Miao_Sh-c_proteinG_mass3_141226_02 142.36 78.935 5393.1 0 1981.8 0 0 2490.1 0 0 0 0 0 921.18 0 530 523;495;427;418;500;544 521 5022;5023;5024;5025 5740;5741;5742;5743 5741 4 DSYLILETLPTEYDSR Unmodified 1913.9258 0.92583859 684 R4GNH3;P17980;E9PKD5;E9PM69;E9PMD8;E9PN50;E9PLG2 PSMC3 26S protease regulatory subunit 6A yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 3 1 92.838 92.698 2;3 1.9893E-10 21324 Miao_Sh-H9_Flag_mass3_141226_02 116.87 87.256 0 0 0 0 0 0 0 0 0 0 0 0 0 531 684 522 5026;5027;5028;5029;5030 5744;5745;5746;5747;5748 5747 5 DSYVGDEAQSK Unmodified 1197.515 0.51496116 524;528 P63261;P60709;I3L3I0;I3L1U9;K7EM38;I3L3R2;J3KT65;G5E9R0;E7EVS6;C9JUM1;C9JZR7;C9JTX5;P68133;P68032;Q5T8M8;A6NL76;P63267;P62736;Q5T8M7;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 ACTG1;ACTB;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 3 3 1 1 1 1 1 1 1 1 2 33.932 34.957 2 3.4113E-45 3137 Miao_Sh-c_Flag_mass3_141226_02 180.81 159.72 13362 0 27.445 14.319 0 0 2959.2 719.51 806.88 58.469 2814.4 2291 3670.4 532 524;528 523 5031;5032;5033;5034;5035;5036;5037;5038;5039;5040;5041;5042;5043;5044;5045;5046;5047 5749;5750;5751;5752;5753;5754;5755;5756;5757;5758;5759;5760;5761;5762;5763;5764 5751 16 DTDIVDEAIYYFK Unmodified 1590.7454 0.74535503 274 O15145;F8VR50;C9JZD1 ARPC3 Actin-related protein 2/3 complex subunit 3 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 105.44 105.64 2 0.00041001 25149 Miao_Sh-H9_Flag_mass3_141226_03 85.536 46.968 2842.8 0 313.49 0 0 0 0 0 0 2529.3 0 0 0 533 274 524 5048;5049;5050 5765;5766 5766 2 DTDSEEEIR Unmodified 1092.4571 0.45711193 202 P62158;H0Y7A7;E7ETZ0;E7EMB3;G3V361;Q96HY3;G3V226 CALM1;CALM2;CALM3 Calmodulin yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching 2 1 1 1 1 1 2 2 31.49 32.352 2 3.3889E-29 3091 Miao_Sh-c_Flag_mass3_141226_02 179.51 120.59 1950.4 0 300.4 0 318 202.95 122.74 163.6 493.77 348.91 0 0 0 534 202 525 5051;5052;5053;5054;5055;5056;5057;5058;5059;5060;5061 5767;5768;5769;5770;5771;5772 5767 6 DTELAEELLQWFLQEEK Unmodified 2120.0314 0.031366293 535 Q00610;Q00610-2;J3KS13;K7EJJ5;J3KRF5 CLTC Clathrin heavy chain 1 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 2 2 1 1 2 119.97 120.22 2;3 1.3571E-44 31542 Miao_Sh-H9_Flag_mass3_141226_02 170.92 135.62 65257 15035 11768 0 4620.5 0 0 11400 13036 9397.2 0 0 0 535 535 526 5062;5063;5064;5065;5066;5067;5068;5069;5070;5071 5773;5774;5775;5776;5777;5778;5779;5780;5781;5782;5783 5780 11 DTEPLIQTAK Unmodified 1114.587 0.58700389 66 P48643;E7ENZ3;B7ZAR1;E9PCA1;P48643-2 CCT5 T-complex protein 1 subunit epsilon yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 2 1 1 43.15 44.947 2 0.0055609 10626 Miao_Sh-H9_proteinG_mass3_141226_01 82.417 46.021 9005.5 249.89 308.28 0 0 0 2716.1 158.81 0 0 357.32 3756.5 1458.5 536 66 527 5072;5073;5074;5075;5076;5077;5078;5079;5080 5784;5785;5786 5785 3 DTLTEEETQFYIAETVLAIDSIHQLGFIHR Unmodified 3488.7464 0.74636467 577 Q15208 STK38 Serine/threonine-protein kinase 38 yes yes 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 117.28 118.19 4 0.020202 28470 Miao_Sh-c_Flag_mass3_141226_03 22.117 15.25 22093 0 0 22093 0 0 0 0 0 0 0 0 0 537 577 528 5081 5787 5787 1 DTLTISGTPEVTCVVVDVGHDDPEVK Unmodified 2781.3379 0.337855 92;93 CON__ENSEMBL:ENSBTAP00000024462;CON__ENSEMBL:ENSBTAP00000024466 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 100.71 88.527 3 7.382E-11 31299 Miao_Sh-H9_proteinG_mass3_141226_01 62.032 51.886 4240.9 0 0 0 0 0 0 0 0 0 4240.9 0 0 + 538 92;93 529 5082 5788 5788 0 DTLYEAVR Unmodified 965.48181 0.48181054 519 P62906 RPL10A 60S ribosomal protein L10a yes yes 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 1 1 1 1 1 2 1 1 47.769 49.312 2 1.0987E-152 11792 Miao_Sh-H9_proteinG_mass3_141226_02 260.59 151.89 99878 1629.8 1472.7 1713.6 1693.3 1181 21456 2571.3 256.19 3275.9 20266 18492 25870 539 519 530 5083;5084;5085;5086;5087;5088;5089;5090;5091;5092;5093;5094;5095;5096 5789;5790;5791;5792;5793;5794;5795;5796;5797;5798;5799;5800;5801;5802 5800 14 DTNGSQFFITTVK Unmodified 1456.7198 0.71980898 400 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 70.184 72.089 2 0.0043289 18751 Miao_Sh-c_proteinG_mass3_141226_03 67.136 56.19 39091 525.25 0 0 0 0 3646.2 0 0 34919 0 0 0 540 400 531 5097;5098;5099 5803 5803 1 DTQSGSLLFIGR Unmodified 1292.6725 0.67246486 468 P50454;H0YEP8;E9PKH2 SERPINH1 Serpin H1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching 1 1 73.328 68.466 2 5.5223E-07 21320 Miao_Sh-H9_proteinG_mass3_141226_02 127.71 64.639 0 0 0 0 0 0 0 0 0 0 0 0 0 541 468 532 5100;5101 5804;5805 5805 2 DTSASAVAVGLK Unmodified 1117.5979 0.59790293 446 P40939;H0YFD6 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 48.193 49.045 2 0.016648 12119 Miao_Sh-H9_proteinG_mass3_141226_01 56.087 17.784 0 0 0 0 0 0 0 0 0 0 0 0 0 542 446 533 5102 5806 5806 1 DTSLYRPALEELR Unmodified 1561.81 0.81002097 559 Q13200;C9JPC0;H7C2Q3 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 67.919 67.467 3 0.014842 12203 Miao_Sh-H9_Flag_mass3_141226_01 51.092 33.924 0 0 0 0 0 0 0 0 0 0 0 0 0 543 559 534 5103 5807 5807 1 DTVTISGPQAPVFEFVEQLR Unmodified 2232.1426 0.14264808 464 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 111.3 111.3 3 0.0033059 26970 Miao_Sh-H9_Flag_mass3_141226_01 47.016 34.127 0 0 0 0 0 0 0 0 0 0 0 0 0 544 464 535 5104;5105;5106 5808;5809;5810 5809 3 DVDGLTSINAGR Unmodified 1216.6048 0.60477922 358 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 52.77 54.349 2 0.001592 13492 Miao_Sh-H9_proteinG_mass3_141226_02 92.247 69.605 0 0 0 0 0 0 0 0 0 0 0 0 0 545 358 536 5107;5108 5811;5812 5812 2 DVDLEFLAK Unmodified 1048.5441 0.54407645 483 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 1 77.216 77.046 2 0.0011668 14157 Miao_Sh-c_Flag_mass3_141226_01 117.31 64.526 43165 8869 9049.8 0 0 0 0 13119 11670 0 456.57 0 0 546 483 537 5109;5110;5111;5112;5113 5813;5814;5815;5816;5817 5813 5 DVFISAAER Unmodified 1006.5084 0.50835964 391 P20618 PSMB1 Proteasome subunit beta type-1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 54.795 53.893 2 0.056789 7878 Miao_Sh-H9_Flag_mass3_141226_02 52.579 27.803 0 0 0 0 0 0 0 0 0 0 0 0 0 547 391 538 5114 5818 5818 1 DVFRDPALK Unmodified 1059.5713 0.57129425 493 P61353;K7ELC7;K7EQQ9 RPL27 60S ribosomal protein L27 yes no 0 0 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 3 1 1 2 3 3 2 63.401 60.27 2;3 0.002375 25123 Miao_Sh-H9_proteinG_mass3_141226_02 94.804 50.112 33082 0 940.89 1397.5 905.09 801.7 7066.2 1035.7 0 2017.6 4639.7 9159.1 5118.8 548 493 539 5115;5116;5117;5118;5119;5120;5121;5122;5123;5124;5125;5126;5127;5128;5129;5130;5131;5132;5133;5134;5135 5819;5820;5821;5822;5823;5824;5825;5826;5827;5828;5829;5830;5831;5832;5833;5834;5835;5836;5837;5838;5839;5840;5841;5842 5835 22 DVFSPIGER Unmodified 1018.5084 0.50835964 149 P55786;E9PLK3;B7Z463 NPEPPS Puromycin-sensitive aminopeptidase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 59.346 59.549 2 0.020962 9655 Miao_Sh-H9_Flag_mass3_141226_03 68.657 37.235 0 0 0 0 0 0 0 0 0 0 0 0 0 549 149 540 5136 5843 5843 1 DVIEEYFK Unmodified 1041.5019 0.50187728 409 P25398 RPS12 40S ribosomal protein S12 yes yes 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 1 2 2 2 1 3 1 1 72.124 71.526 2 0.0069747 14470 Miao_Sh-c_proteinG_mass3_141226_01 97.431 51.005 36181 500.5 4126.9 0 3492.7 2428.2 560.29 7136.3 0 3988.8 5808.2 2787.5 5352.1 550 409 541 5137;5138;5139;5140;5141;5142;5143;5144;5145;5146;5147;5148;5149;5150;5151;5152;5153;5154;5155 5844;5845;5846;5847;5848;5849;5850;5851;5852;5853;5854;5855;5856;5857 5846 14 DVIELTDDSFDK Unmodified 1395.6406 0.64055561 57 Q15084;Q15084-3;F8WA83;B5MCQ5;Q15084-2 PDIA6 Protein disulfide-isomerase A6 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 71.481 71.945 2 0.00040374 20372 Miao_Sh-H9_proteinG_mass3_141226_02 102.87 73.339 8142.9 1595.2 0 0 0 0 0 528.32 3318 0 0 2701.3 0 551 57 542 5156;5157;5158;5159;5160;5161 5858;5859;5860;5861 5860 4 DVLIQGLIDENPGLQLIIR Unmodified 2118.2049 0.2048544 533 P78527;E7EUY0;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 3 113.45 113.42 3 8.2538E-05 28917 Miao_Sh-H9_Flag_mass3_141226_02 61.096 57.781 0 0 0 0 0 0 0 0 0 0 0 0 0 552 533 543 5162;5163;5164;5165 5862;5863;5864;5865 5862 4 DVLLQVDDER Unmodified 1200.5986 0.59863121 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 54.504 58.614 2 4.9863E-06 14263 Miao_Sh-c_proteinG_mass3_141226_03 132.32 94.02 45126 0 0 0 0 4569.4 11640 0 0 0 0 28916 0 553 433 544 5166;5167;5168 5866 5866 1 DVLLQVDDERR Unmodified 1356.6997 0.69974224 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 1 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 1 4 2 5 4 3 58.871 57.662 2;3 2.0784E-14 12772 Miao_Sh-H9_proteinG_mass3_141226_02 158.56 118.68 207130 0 0 3083.2 10323 4431.1 38166 0 9777.9 8478.5 58568 41338 32966 554 433 545 5169;5170;5171;5172;5173;5174;5175;5176;5177;5178;5179;5180;5181;5182;5183;5184;5185;5186;5187;5188;5189;5190;5191;5192;5193 5867;5868;5869;5870;5871;5872;5873;5874;5875;5876;5877;5878;5879;5880;5881;5882;5883;5884;5885;5886;5887;5888;5889;5890;5891;5892;5893 5883 26 DVNAAIATIK Unmodified 1014.571 0.5709599 529 P68363 TUBA1B Tubulin alpha-1B chain no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 1 1 1 2 1 2 1 1 54.581 55.653 2 4.8911E-07 12995 Miao_Sh-c_proteinG_mass3_141226_03 139.76 64.547 217310 5259.1 6573.9 5188 2460.4 0 70946 8997.3 11082 8004.9 41290 31033 26479 555 529 546 5194;5195;5196;5197;5198;5199;5200;5201;5202;5203;5204;5205;5206;5207;5208 5894;5895;5896;5897;5898;5899;5900;5901;5902;5903;5904;5905;5906;5907;5908;5909;5910;5911;5912;5913;5914;5915;5916;5917;5918;5919;5920 5903 26 DVNFEFPEFQL Unmodified 1383.6347 0.63468237 496 P62081 RPS7 40S ribosomal protein S7 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 2 1 4 113.62 108.53 2 1.4643E-49 37353 Miao_Sh-H9_proteinG_mass3_141226_02 193.62 162.02 194030 15168 17256 14854 0 0 14802 19889 27002 22854 34220 26597 1388.9 556 496 547 5209;5210;5211;5212;5213;5214;5215;5216;5217;5218;5219;5220;5221;5222 5921;5922;5923;5924;5925;5926;5927;5928;5929;5930;5931;5932;5933;5934;5935;5936;5937;5938;5939;5940 5936 20 DVNQQEFVR Unmodified 1133.5465 0.54653606 442 P39019;M0R2L9;M0QXK4;M0QYF7;M0R140 RPS19 40S ribosomal protein S19 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 2 2 2 1 44.036 45.807 2 2.4381E-21 10433 Miao_Sh-H9_proteinG_mass3_141226_02 175.07 138.5 101140 2008.6 2031.3 1919.3 0 1340.7 22394 2607.4 0 0 25187 22862 20791 557 442 548 5223;5224;5225;5226;5227;5228;5229;5230;5231;5232;5233;5234;5235;5236 5941;5942;5943;5944;5945;5946;5947;5948;5949;5950;5951;5952;5953;5954;5955;5956;5957;5958;5959;5960;5961 5959 21 DVNVNFEK Unmodified 963.46616 0.46616048 24 Q15185;B4DP11;B4DDC6;B4DHP2;B4DP21 PTGES3 Prostaglandin E synthase 3 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 45.399 47.179 2 0.0029415 11526 Miao_Sh-H9_proteinG_mass3_141226_01 99.855 63.644 0 0 0 0 0 0 0 0 0 0 0 0 0 558 24 549 5237;5238 5962;5963 5962 2 DVQEIATVVVPK Unmodified 1296.7289 0.7289171 641 Q9BRT6 LLPH Protein LLP homolog yes yes 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 69.6 69.68 2 0.00056014 19718 Miao_Sh-H9_proteinG_mass3_141226_02 107.2 83.878 15046 0 0 0 4455.5 0 2446.7 0 0 0 2916.7 2730.8 2496.2 559 641 550 5239;5240;5241;5242;5243;5244 5964;5965;5966;5967;5968;5969;5970;5971 5968 8 DVVQAYPEVR Unmodified 1174.5982 0.59823728 548 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 49.265 51.57 2 0.022077 12789 Miao_Sh-H9_proteinG_mass3_141226_01 64.64 43.94 3546.9 0 80.168 311.24 0 0 1141.8 0 0 0 1219.1 0 794.61 560 548 551 5245;5246;5247;5248;5249 5972 5972 1 DVYLSPR Unmodified 848.43922 0.43921744 201 P38159;H0Y6E7;H3BT71;P38159-2;Q96E39;B3KRG5;H3BUY5 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 1 2 40.82 42.323 2 0.034414 8892 Miao_Sh-c_proteinG_mass3_141226_03 79.469 16.751 3415.9 178.2 0 0 0 0 2510.5 0 204.77 0 522.43 0 0 561 201 552 5250;5251;5252;5253;5254 5973;5974 5973 2 DWVFLNYTYK Unmodified 1347.6499 0.6499385 676 Q9Y2H1;B4E3J8 STK38L Serine/threonine-protein kinase 38-like yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 1 98.158 88.366 2 0.0039576 17533 Miao_Sh-c_Flag_mass3_141226_03 89.679 58.257 7270.4 0 0 2336.7 0 0 2785.7 0 0 0 0 0 2148 562 676 553 5255;5256;5257;5258;5259 5975;5976;5977 5975 3 DWVLNEFR Unmodified 1077.5243 0.52434406 79 Q92841;Q92841-3;C9JMU5;H3BLZ8;Q92841-1;Q92841-2 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 80.607 82.01 2 0.056473 15417 Miao_Sh-c_Flag_mass3_141226_03 62.546 41.846 650.42 0 0 650.42 0 0 0 0 0 0 0 0 0 563 79 554 5260 5978 5978 1 DYAFIHFDER Unmodified 1311.5884 0.58840088 286 O60506-4;O60506-3;O60506;O60506-2;O60506-5 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 2 102.08 92.007 3 0.004877 31530 Miao_Sh-H9_proteinG_mass3_141226_01 72.2 52.21 6338.4 0 0 0 0 0 0 0 0 0 2218 4120.4 0 564 286 555 5261;5262;5263 5979;5980;5981 5980 3 DYAFVHFEDR Unmodified 1297.5728 0.57275081 281 O43390;O43390-2;O43390-4;O43390-3;B4DT28;E7ETM7 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 64.176 67.049 3 0.0082751 11887 Miao_Sh-c_proteinG_mass3_141226_01 64.374 54.719 2299.8 0 0 323.11 1224 0 752.68 0 0 0 0 0 0 565 281 556 5264;5265;5266;5267 5982;5983 5982 2 DYEEVGVDSVEGEGEEEGEEY Unmodified 2347.8976 0.89757075 529 P68363 TUBA1B Tubulin alpha-1B chain no no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 3 2 1 74.13 72.785 2;3 3.3291E-13 21622 Miao_Sh-H9_proteinG_mass3_141226_02 92.679 90.79 13713 407.08 0 0 0 0 0 0 1009.8 0 8224.4 1927.1 2144.5 566 529 557 5268;5269;5270;5271;5272;5273;5274;5275;5276 5984;5985;5986;5987;5988;5989;5990 5989 4 DYETATLSEIK Unmodified 1268.6136 0.61361257 362 P12814;P12814-2;P12814-3;P12814-4;H9KV75;H7C5W8 ACTN1 Alpha-actinin-1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 61.194 63.851 2 0.004236 16873 Miao_Sh-H9_proteinG_mass3_141226_03 98.156 77.368 0 0 0 0 0 0 0 0 0 0 0 0 0 567 362 558 5277 5991 5991 1 DYFEEYGK Unmodified 1049.4342 0.43419164 397 P22626;P22626-2 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 4 1 2 5 3 67.458 62.078 2 2.4782E-07 14335 Miao_Sh-H9_proteinG_mass3_141226_02 131.22 110.52 44011 0 0 0 211.53 0 13920 0 0 1197.8 14827 2094.5 11761 568 397 559 5278;5279;5280;5281;5282;5283;5284;5285;5286;5287;5288;5289;5290;5291;5292;5293 5992;5993;5994;5995;5996;5997;5998;5999;6000;6001;6002;6003;6004;6005;6006;6007 6001 16 DYFEQYGK Unmodified 1048.4502 0.45017606 180 P09651;F8W6I7;P09651-3;P09651-2;F8VZ49;Q32P51;F8VTQ5;F8VYN5 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 3 3 4 66.689 61.722 2 2.6012E-05 14220 Miao_Sh-H9_proteinG_mass3_141226_01 146.79 110.6 60207 0 0 0 183.79 0 2462.4 0 351.39 777.91 30156 4714.3 21562 569 180 560 5294;5295;5296;5297;5298;5299;5300;5301;5302;5303;5304;5305;5306;5307;5308 6008;6009;6010;6011;6012;6013;6014;6015;6016;6017;6018;6019;6020;6021;6022;6023;6024;6025 6013 18 DYFGAHTYELLAK Unmodified 1526.7405 0.74054442 35 P52209;F5H7U0;B4DQJ8 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 1 73.284 74.303 3 0.0065653 14768 Miao_Sh-c_proteinG_mass3_141226_02 55.261 35.603 7779.5 0 885.58 1148.8 0 1806.8 0 1255.7 2074.9 0 0 0 607.66 570 35 561 5309;5310;5311;5312;5313;5314 6026 6026 1 DYLHLPPEIVPATLR Unmodified 1732.9512 0.9512059 460 P46783;F6U211;S4R435 RPS10;RPS10-NUDT3 40S ribosomal protein S10 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 3 1 2 3 3 1 3 2 1 1 1 92.568 90.719 2;3 6.2218E-08 35199 Miao_Sh-c_proteinG_mass3_141226_03 90.707 73.821 96405 4687.4 4912.4 1221.5 9889.4 13352 8678.6 4803.5 10019 10524 10509 8502.8 9304.6 571 460 562 5315;5316;5317;5318;5319;5320;5321;5322;5323;5324;5325;5326;5327;5328;5329;5330;5331;5332;5333;5334;5335;5336;5337 6027;6028;6029;6030;6031;6032;6033;6034;6035;6036;6037;6038;6039;6040;6041;6042;6043;6044;6045;6046;6047;6048;6049;6050;6051;6052;6053;6054;6055;6056;6057 6041 31 DYLHYIR Unmodified 978.49232 0.49231565 254 P62280;M0QZC5;M0R1H5 RPS11 40S ribosomal protein S11 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 2 1 89.787 76.905 2 0.031018 26622 Miao_Sh-H9_proteinG_mass3_141226_01 81.381 49.026 3720.9 0 0 0 0 0 1736.2 0 0 0 1984.8 0 0 572 254 563 5338;5339;5340 6058;6059;6060;6061 6061 4 DYPVVSIEDPFDQDDWGAWQK Unmodified 2509.1074 0.10738478 333 P06733;P06733-2 ENO1 Alpha-enolase yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 102.92 103.96 3 3.0861E-28 22630 Miao_Sh-c_Flag_mass3_141226_03 114.55 106.08 0 0 0 0 0 0 0 0 0 0 0 0 0 573 333 564 5341;5342;5343 6062;6063;6064 6063 3 DYQELMNTK Unmodified 1140.5121 0.51212439 314 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 50.988 53.495 2 1.0698E-17 13254 Miao_Sh-H9_proteinG_mass3_141226_02 148.9 92.856 0 0 0 0 0 0 0 0 0 0 0 0 0 + 574 314 565 5344 6065 6065 1 DYTYEELLNR Unmodified 1314.6092 0.6091959 390 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 72.558 72.106 2 0.0063447 13913 Miao_Sh-H9_Flag_mass3_141226_01 79.659 56.973 0 0 0 0 0 0 0 0 0 0 0 0 0 575 390 566 5345 6066 6066 1 DYVDLFR Unmodified 926.44978 0.44978213 533 P78527;E7EUY0;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 73.992 73.942 2 0.022594 14825 Miao_Sh-H9_Flag_mass3_141226_03 80.462 62.614 0 0 0 0 0 0 0 0 0 0 0 0 0 576 533 567 5346 6067 6067 1 EAAENSLVAYK Unmodified 1193.5928 0.59281755 500 P62258;P62258-2;K7EM20 YWHAE 14-3-3 protein epsilon yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 46.754 48.057 2 0.00044289 11209 Miao_Sh-H9_proteinG_mass3_141226_02 120.86 82.437 3181.4 435.72 0 0 0 0 0 0 0 0 0 2745.6 0 577 500 568 5347;5348;5349;5350 6068;6069;6070 6069 3 EAAEQDVEK Unmodified 1017.4615 0.46146903 414 P26373;P26373-2;J3KS98 RPL13 60S ribosomal protein L13 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 2 29.317 31.991 2 0.0056854 5185 Miao_Sh-H9_proteinG_mass3_141226_03 85.533 39.853 1336.7 0 0 55.662 0 0 1065.8 0 0 0 0 0 215.21 578 414 569 5351;5352;5353;5354;5355;5356 6071;6072;6073;6074 6074 4 EAAKKQAMK Oxidation (M);3 GlyGly (K) 1361.6721 0.67214728 646 Q9H0G5 NSRP1 Nuclear speckle splicing regulatory protein 1 yes yes 0 3 1 0 2 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 113.25 110.18 2 0.028735 27657 Miao_Sh-H9_Flag_mass3_141226_02 48.794 14.099 6730.1 0 0 0 1666.6 0 3484 248.3 1331.2 0 0 0 0 579 646 570 5357;5358;5359;5360 6075 6075 83 1 EAALGAGFSDK Unmodified 1064.5138 0.51383895 484 P55084;P55084-2;B5MD38;F5GZQ3;C9JEY0;C9JE81 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 48.063 50.469 2 0.039183 10968 Miao_Sh-H9_proteinG_mass3_141226_02 54.023 16.377 2548.7 0 0 391.84 710.61 303.08 0 0 0 0 0 1143.2 0 580 484 571 5361;5362;5363;5364 6076 6076 1 EAALLEEEEGV Unmodified 1187.5558 0.55576334 451 P43358 MAGEA4 Melanoma-associated antigen 4 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 1 2 1 66.035 67.438 2 4.7486E-148 18057 Miao_Sh-H9_proteinG_mass3_141226_03 204.34 181.65 5019.6 0 0 0 0 0 0 0 0 0 1132.2 0 3887.4 581 451 572 5365;5366;5367;5368 6077;6078;6079 6079 3 EAALYPHLPPEADPR Unmodified 1674.8366 0.83657007 563 Q13501;Q13501-2 SQSTM1 Sequestosome-1 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 3 1 2 1 2 1 1 60.322 61.458 3 6.0138E-05 10061 Miao_Sh-H9_Flag_mass3_141226_01 102.65 66.972 28319 4430.7 2695.1 0 887.61 0 1188.2 3996.2 9752.5 4487.1 0 881.99 0 582 563 573 5369;5370;5371;5372;5373;5374;5375;5376;5377;5378;5379;5380;5381 6080;6081;6082;6083;6084;6085;6086;6087;6088;6089;6090;6091 6084 12 EAATAVEQEK Unmodified 1074.5193 0.51931826 306 O95816;B4DXE2;A2A296 BAG2 BAG family molecular chaperone regulator 2 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 27.45 27.433 2 0.016191 3135 Miao_Sh-c_Flag_mass3_141226_01 69.65 47.009 255.8 209.23 0 27.741 0 0 0 18.83 0 0 0 0 0 583 306 574 5382;5383;5384 6092 6092 1 EAEAAIYHLQLFEELR Unmodified 1930.9789 0.97887721 368 P14618;P14618-3 PKM Pyruvate kinase PKM yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 2 1 2 2 2 1 95.326 92.901 2;3 1.9223E-54 20013 Miao_Sh-H9_Flag_mass3_141226_01 179.14 149.23 58312 7993.2 0 7771.6 6854.9 2670.2 574.68 15100 14409 0 2938.6 0 0 584 368 575 5385;5386;5387;5388;5389;5390;5391;5392;5393;5394;5395;5396;5397 6093;6094;6095;6096;6097;6098;6099;6100;6101;6102;6103;6104;6105;6106;6107 6101 15 EAEAAIYHLQLFEELRR Unmodified 2087.08 0.079988241 368 P14618;P14618-3 PKM Pyruvate kinase PKM yes no 0 0 0 0 1 By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching 2 1 1 1 1 2 2 2 1 98.081 93.874 3;4 3.8276E-26 36977 Miao_Sh-H9_proteinG_mass3_141226_01 153.94 127.65 52866 4255.9 5148.9 0 4793.6 576.56 2736.5 0 5807.8 10955 13494 0 5097.5 585 368 576 5398;5399;5400;5401;5402;5403;5404;5405;5406;5407;5408;5409;5410 6108;6109;6110;6111;6112;6113 6113 6 EAFELFDR Unmodified 1025.4818 0.48181054 370 P14649;F8W1I5 MYL6B Myosin light chain 6B yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 2 3 2 3 1 4 4 1 78.889 75.904 2 2.1699E-12 31771 Miao_Sh-H9_proteinG_mass3_141226_02 141.52 108.26 54939 4669.8 4645.3 0 219.62 0 10803 1434.2 0 13810 11776 2903.9 4676.8 586 370 577 5411;5412;5413;5414;5415;5416;5417;5418;5419;5420;5421;5422;5423;5424;5425;5426;5427;5428;5429;5430;5431;5432;5433 6114;6115;6116;6117;6118;6119;6120;6121;6122;6123;6124;6125;6126;6127;6128;6129;6130;6131;6132;6133;6134;6135;6136 6136 23 EAFNMIDQNR Unmodified 1236.5557 0.55572054 240 O14950;P19105;J3QRS3;P24844;J3KTJ1;P24844-2 MYL12B;MYL12A;MYL9 Myosin regulatory light chain 12B;Myosin regulatory light chain 12A;Myosin regulatory light polypeptide 9 yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 1 1 2 1 1 1 1 53.107 54.522 2 2.9484E-25 13363 Miao_Sh-H9_proteinG_mass3_141226_03 163.66 125.39 52157 3479 3780.9 0 0 2916.1 8318.5 8951.9 329.49 8161.3 8789.6 7429.8 0 587 240 578 5434;5435;5436;5437;5438;5439;5440;5441;5442;5443;5444;5445;5446 6137;6138;6139;6140;6141;6142;6143;6144;6145;6146;6147;6148 6148 12 EAFNMIDQNR Oxidation (M) 1252.5506 0.55063516 240 O14950;P19105;J3QRS3;P24844;J3KTJ1;P24844-2 MYL12B;MYL12A;MYL9 Myosin regulatory light chain 12B;Myosin regulatory light chain 12A;Myosin regulatory light polypeptide 9 yes no 0 0 1 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 1 1 2 3 3 2 42.5 43.945 2 2.3608E-13 9542 Miao_Sh-H9_proteinG_mass3_141226_03 122.96 102.82 37309 635.86 497.9 0 853.42 0 4688.7 846.05 0 2089.5 11691 8208 7798.9 588 240 578 5447;5448;5449;5450;5451;5452;5453;5454;5455;5456;5457;5458;5459;5460;5461;5462;5463;5464 6149;6150;6151;6152;6153;6154;6155;6156;6157;6158;6159;6160;6161;6162 6162 30 13 EAFQLFDR Unmodified 1024.4978 0.49779495 179;198 P60660;P60660-2;F8W1R7;G3V1V0;B7Z6Z4;G3V1Y7;J3KND3;G8JLA2 MYL6;PDE6H Myosin light polypeptide 6 no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 3 3 5 1 1 1 2 3 3 77.37 74.935 2 8.8249E-76 12107 Miao_Sh-c_Flag_mass3_141226_01 224.86 154.61 2201500 112200 144300 179300 194420 168560 286710 159680 174880 208320 252540 134120 186480 589 179;198 579 5465;5466;5467;5468;5469;5470;5471;5472;5473;5474;5475;5476;5477;5478;5479;5480;5481;5482;5483;5484;5485;5486;5487;5488;5489;5490 6163;6164;6165;6166;6167;6168;6169;6170;6171;6172;6173;6174;6175;6176;6177;6178;6179;6180;6181;6182;6183;6184;6185;6186;6187;6188;6189;6190;6191;6192;6193;6194;6195;6196;6197;6198;6199;6200;6201;6202;6203;6204;6205;6206;6207;6208;6209;6210;6211;6212;6213;6214;6215;6216;6217;6218;6219;6220;6221;6222;6223;6224;6225;6226;6227;6228;6229;6230;6231 6163 69 EAFSLFDK Unmodified 955.4651 0.46509784 202 P62158;H0Y7A7;E7ETZ0;E7EMB3;F8WBR5;M0QZ52;G3V479;P27482 CALM1;CALM2;CALM3;CALML3 Calmodulin;Calmodulin-like protein 3 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 2 1 2 3 1 1 2 70.492 70.291 2 0.0037274 19659 Miao_Sh-H9_proteinG_mass3_141226_03 96.311 65.624 57480 0 6982 6850.3 6230.9 4504.8 8958.2 6510.1 10332 1328 5783.4 0 0 590 202 580 5491;5492;5493;5494;5495;5496;5497;5498;5499;5500;5501;5502;5503;5504;5505;5506;5507 6232;6233;6234;6235;6236;6237;6238;6239;6240;6241;6242;6243;6244 6243 13 EAGELKPEEEITVGPVQK Unmodified 1952.0102 0.01023692 477 P53618 COPB1 Coatomer subunit beta yes yes 0 0 0 0 1 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 56.35 57.352 3 0.0024457 14875 Miao_Sh-H9_proteinG_mass3_141226_02 47.916 34.762 3611.8 0 0 961.83 841.79 0 0 0 0 0 1808.2 0 0 591 477 581 5508;5509;5510;5511 6245;6246 6246 2 EAGLVAQHPPAR Unmodified 1244.6626 0.66256887 82 Q9BRJ6;C9JQV0;H7C0T1;H7C2R9 C7orf50 Uncharacterized protein C7orf50 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 1 2 1 3 3 2 33.858 35.052 2;3 0.00017704 7238 Miao_Sh-H9_proteinG_mass3_141226_01 123.51 90.135 15066 380.1 56.9 216.98 89.976 0 3226.4 18.171 253.67 0 4478 3877.5 2468.3 592 82 582 5512;5513;5514;5515;5516;5517;5518;5519;5520;5521;5522;5523;5524;5525;5526;5527;5528 6247;6248;6249;6250;6251;6252;6253;6254;6255;6256;6257;6258 6253 12 EAGNINQSLLTLGR Unmodified 1484.7947 0.79470526 473 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 70.305 70.656 2 0.013373 12215 Miao_Sh-c_Flag_mass3_141226_02 52.599 32.395 0 0 0 0 0 0 0 0 0 0 0 0 0 593 473 583 5529 6259 6259 1 EAGVFVPR Unmodified 873.47085 0.47085192 476 P53396;P53396-2;B4E3P0 ACLY ATP-citrate synthase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 45.887 47.449 2 0.0020837 11056 Miao_Sh-H9_proteinG_mass3_141226_02 116.73 73.856 5300.5 378.54 0 0 0 0 1756.6 0 786.97 125.95 0 2252.4 0 594 476 584 5530;5531;5532;5533;5534 6260 6260 1 EAIEGTYIDK Unmodified 1137.5554 0.55536941 254 P62280;M0QZC5 RPS11 40S ribosomal protein S11 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 2 1 1 1 1 46.552 47.922 2 1.333E-18 11125 Miao_Sh-H9_proteinG_mass3_141226_02 163.84 120.76 76319 1563.3 1926.5 0 1481.9 1232 14304 2249.4 2863.5 2509 18288 13859 16042 595 254 585 5535;5536;5537;5538;5539;5540;5541;5542;5543;5544;5545;5546 6261;6262;6263;6264;6265;6266;6267;6268;6269;6270;6271;6272;6273;6274;6275;6276;6277;6278;6279 6274 19 EALEPSGENVIQNK Unmodified 1526.7577 0.75765105 292 O75477 ERLIN1 Erlin-1 yes yes 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 49.954 49.815 2 0.0015949 5671 Miao_Sh-c_Flag_mass3_141226_01 69.345 27.261 0 0 0 0 0 0 0 0 0 0 0 0 0 596 292 586 5547;5548 6280;6281 6280 2 EALGGQALYPHVLVK Unmodified 1593.8879 0.88787736 643 Q9BUJ2;Q9BUJ2-2;B7Z4B8;Q9BUJ2-4;M0R3F1;Q9BUJ2-3;M0QYZ0 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 4 2 3 4 74.497 72.884 2;3 1.0695E-05 18830 Miao_Sh-H9_proteinG_mass3_141226_01 86.738 66.614 129300 940.47 0 0 17699 16010 21280 0 0 0 23538 18476 31355 597 643 587 5549;5550;5551;5552;5553;5554;5555;5556;5557;5558;5559;5560;5561;5562;5563;5564 6282;6283;6284;6285;6286;6287;6288;6289;6290;6291;6292;6293;6294;6295;6296;6297;6298;6299;6300 6291 19 EALLGVQEDVDEYVK Unmodified 1705.841 0.84104633 186 Q14257;H0YL43;F8WCY5 RCN2 Reticulocalbin-2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 81.696 81.144 2 2.1691E-05 16761 Miao_Sh-H9_Flag_mass3_141226_01 83.37 64.27 0 0 0 0 0 0 0 0 0 0 0 0 0 598 186 588 5565 6301 6301 1 EALLSSAVDHGSDEVK Unmodified 1655.8002 0.80024414 159 P78371;F8VQ14;F5GWF6;P78371-2 CCT2 T-complex protein 1 subunit beta yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 54.008 56.053 3 2.1028E-05 14093 Miao_Sh-H9_proteinG_mass3_141226_01 88.311 57.313 7214.1 0 0 0 643.78 0 1781.3 706.67 0 0 2127.8 1954.5 0 599 159 589 5566;5567;5568;5569;5570 6302 6302 1 EALTYDGALLGDR Unmodified 1392.6885 0.68850885 576 Q15056;Q15056-2 EIF4H Eukaryotic translation initiation factor 4H yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 2 1 64.202 68.207 2 0.00041498 19406 Miao_Sh-H9_proteinG_mass3_141226_01 79.614 61.555 4725.2 0 0 0 0 0 2814.4 0 0 0 0 1910.9 0 600 576 590 5571;5572;5573;5574 6303;6304;6305 6304 3 EANNFLWPFK Unmodified 1264.6241 0.6240581 388 P18124;A8MUD9 RPL7 60S ribosomal protein L7 yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 1 1 1 1 1 92.82 93.702 2 3.3565E-24 18996 Miao_Sh-c_Flag_mass3_141226_03 156.57 117.53 29899 0 0 0 8276.4 6728.6 0 4369.4 5463.3 5061.1 0 0 0 601 388 591 5575;5576;5577;5578;5579;5580;5581 6306;6307;6308;6309;6310;6311;6312;6313;6314;6315 6306 10 EAQTSFLHLGYLPNQLFR Unmodified 2133.1007 0.10072368 622 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 105.72 100.31 3 0.043318 37853 Miao_Sh-H9_proteinG_mass3_141226_01 32.366 21.538 0 0 0 0 0 0 0 0 0 0 0 0 0 602 622 592 5582;5583 6316;6317 6317 2 EATDAIGHLDR Unmodified 1196.5786 0.57856447 553 Q12906;Q12906-4;Q12906-5;Q12906-2;Q12906-6;Q12906-3;Q12906-7 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 2 39.765 41.82 2;3 0.012417 9713 Miao_Sh-H9_proteinG_mass3_141226_01 56.087 38.028 7008.6 0 51.764 300.7 138.42 34.604 2594.1 0 0 137.98 2561.9 1189.1 0 603 553 593 5584;5585;5586;5587;5588;5589;5590;5591;5592 6318;6319;6320 6318 2 EAVELPLTHFELYK Unmodified 1687.8821 0.88212328 453 P43686;P43686-2 PSMC4 26S protease regulatory subunit 6B yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 1 1 1 1 1 1 86.993 85.783 3 6.6705E-05 16689 Miao_Sh-c_Flag_mass3_141226_03 82.069 60.013 24145 1302.9 3016 3381.8 0 0 0 3830.9 5148.4 6876.1 0 588.6 0 604 453 594 5593;5594;5595;5596;5597;5598;5599;5600 6321;6322;6323;6324;6325;6326;6327;6328;6329;6330;6331;6332 6325 12 EAVLLLK Unmodified 784.50584 0.50584045 438 P36578;H3BM89;H3BTP7 RPL4 60S ribosomal protein L4 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 92.374 75.182 2 0.03907 27472 Miao_Sh-H9_proteinG_mass3_141226_03 76.847 14.129 1038.8 0 0 0 0 0 0 0 0 0 0 0 1038.8 605 438 595 5601 6333 6333 1 EAVSSAFFSLLQTLSTQFK Unmodified 2103.0888 0.088821592 224 Q9BQG0;I3L1L3;Q9BQG0-2;I3L2H8 MYBBP1A Myb-binding protein 1A yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 120.01 120.26 3 2.4109E-06 32607 Miao_Sh-c_proteinG_mass3_141226_01 71.592 61.446 0 0 0 0 0 0 0 0 0 0 0 0 0 606 224 596 5602 6334 6334 1 EAWDLGVCR Unmodified 1104.5022 0.50222841 167 P19474;F5H012;P19474-2 TRIM21 E3 ubiquitin-protein ligase TRIM21 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 65.399 63.469 2 0.0020567 10639 Miao_Sh-H9_Flag_mass3_141226_03 108.43 70.884 9261.9 1975.8 212.53 1295 0 0 0 0 3083.7 2543.1 151.8 0 0 607 167 597 5603;5604;5605;5606;5607;5608 6335;6336;6337;6338 6338 4 EAYPGDVFYLHSR Unmodified 1552.731 0.73104237 410 P25705;P25705-2;P25705-3 ATP5A1 ATP synthase subunit alpha, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 1 67.8 66.497 3 0.022348 11873 Miao_Sh-c_proteinG_mass3_141226_02 45.28 26.945 9906.3 1048.7 995.25 1009 0 2695.1 2395.3 0 0 1762.9 0 0 0 608 410 598 5609;5610;5611;5612;5613;5614;5615 6339;6340 6339 2 EDAANNYAR Unmodified 1022.4417 0.44173664 529 P68363 TUBA1B Tubulin alpha-1B chain no no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 29.133 29.045 2 0.0007296 2758 Miao_Sh-H9_Flag_mass3_141226_02 119.21 72.217 922.2 497.1 0 177.73 0 0 0 24.442 222.93 0 0 0 0 609 529 599 5616;5617;5618;5619 6341;6342 6342 2 EDGAISTIVLR Unmodified 1172.6401 0.6401021 469 P50990;P50990-2;P50990-3 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 1 1 2 2 1 67.268 65.413 2 0.0010984 17572 Miao_Sh-H9_proteinG_mass3_141226_02 103.43 70.345 18480 0 0 0 0 0 4302 504.59 0 812.29 5676.6 7184.2 0 610 469 600 5620;5621;5622;5623;5624;5625;5626;5627;5628;5629 6343;6344;6345;6346;6347;6348 6347 6 EDGLAQQQTQLNLR Unmodified 1612.8169 0.81689726 464 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 54.759 55.377 2 3.9815E-09 8140 Miao_Sh-H9_Flag_mass3_141226_03 126.1 110.23 0 0 0 0 0 0 0 0 0 0 0 0 0 611 464 601 5630;5631;5632 6349;6350;6351 6350 3 EDIIQGFR Unmodified 976.49779 0.49779495 364 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 60.403 60.904 2 0.01487 16741 Miao_Sh-H9_proteinG_mass3_141226_01 84.498 50.409 5868.4 0 658.17 0 831.25 0 0 0 0 1479.2 2899.8 0 0 612 364 602 5633;5634;5635;5636 6352 6352 1 EDITQSAQHALR Unmodified 1367.6793 0.67934115 553 Q12906;Q12906-4;Q12906-5;Q12906-2;Q12906-6;Q12906-3;Q12906-7 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 43.337 46.119 3 0.02817 10976 Miao_Sh-H9_proteinG_mass3_141226_02 43.613 18.917 4326.5 0 0 0 0 0 0 0 0 0 0 3441.3 885.19 613 553 603 5637;5638 6353 6353 1 EDLENTLK Unmodified 960.47639 0.47639081 257 P30530;M0R0W6;P30530-2 AXL Tyrosine-protein kinase receptor UFO yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 43.751 45.255 2 0.03458 4609 Miao_Sh-c_Flag_mass3_141226_03 72.038 38.225 1492.3 0 0 494.32 0 0 343.59 0 150.32 504.08 0 0 0 614 257 604 5639;5640;5641;5642 6354 6354 1 EDLHDMLASLGK Unmodified 1327.6442 0.6442012 240 O14950;P19105;J3QRS3;P24844;J3KTJ1 MYL12B;MYL12A;MYL9 Myosin regulatory light chain 12B;Myosin regulatory light chain 12A;Myosin regulatory light polypeptide 9 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 6 1 2 4 3 5 7 13 1 10 2 92.16 87.954 2;3 1.5232E-90 17874 Miao_Sh-H9_Flag_mass3_141226_03 208.27 161.91 219350 12364 9356.2 10943 30517 30566 25588 8085.5 14114 26621 18750 10967 21476 615 240 605 5643;5644;5645;5646;5647;5648;5649;5650;5651;5652;5653;5654;5655;5656;5657;5658;5659;5660;5661;5662;5663;5664;5665;5666;5667;5668;5669;5670;5671;5672;5673;5674;5675;5676;5677;5678;5679;5680;5681;5682;5683;5684;5685;5686;5687;5688;5689;5690;5691;5692;5693;5694;5695;5696;5697;5698 6355;6356;6357;6358;6359;6360;6361;6362;6363;6364;6365;6366;6367;6368;6369;6370;6371;6372;6373;6374;6375;6376;6377;6378;6379;6380;6381;6382;6383;6384;6385;6386;6387;6388;6389;6390;6391;6392;6393;6394;6395;6396;6397;6398;6399;6400;6401;6402;6403;6404;6405;6406;6407;6408;6409;6410;6411;6412;6413;6414;6415;6416;6417;6418;6419;6420;6421;6422;6423;6424;6425;6426;6427;6428;6429;6430;6431;6432;6433;6434;6435;6436;6437;6438;6439;6440;6441;6442;6443;6444;6445;6446 6416 92 EDLHDMLASLGK Oxidation (M) 1343.6391 0.63911582 240 O14950;P19105;J3QRS3;P24844;J3KTJ1 MYL12B;MYL12A;MYL9 Myosin regulatory light chain 12B;Myosin regulatory light chain 12A;Myosin regulatory light polypeptide 9 yes no 0 0 1 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 1 3 1 2 2 3 67.383 65.155 2;3 0.0027038 16317 Miao_Sh-H9_proteinG_mass3_141226_01 66.538 46.407 46141 1875.9 0 0 197.97 5166.2 14841 0 1688.7 0 900.51 11738 9732.4 616 240 605 5699;5700;5701;5702;5703;5704;5705;5706;5707;5708;5709;5710;5711;5712;5713 6447;6448;6449;6450;6451;6452 6450 31 6 EDLRLPEGDLGK Unmodified 1340.6936 0.69359423 225 P63241;I3L397;I3L504;P63241-2 EIF5A Eukaryotic translation initiation factor 5A-1 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 54.676 57.432 2;3 0.003188 14259 Miao_Sh-H9_proteinG_mass3_141226_03 80.871 39.79 16715 0 0 0 0 1403.9 4618.5 0 0 663 5636.3 0 4393.3 617 225 606 5714;5715;5716;5717;5718;5719;5720 6453;6454;6455;6456;6457;6458;6459;6460 6458 8 EDLVFIFWAPESAPLK Unmodified 1860.9662 0.96618726 404 P23528;G3V1A4;E9PP50;E9PK25;E9PQB7;Q9Y281;Q9Y281-3 CFL1;CFL2 Cofilin-1;Cofilin-2 yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 2 1 110.47 110.74 2;3 2.4236E-08 28236 Miao_Sh-H9_Flag_mass3_141226_02 89.636 71.059 8717.2 0 1944.1 547.15 0 0 0 3022 3203.9 0 0 0 0 618 404 607 5721;5722;5723;5724;5725;5726;5727 6461;6462;6463;6464;6465;6466;6467;6468;6469 6468 9 EDMAALEK Unmodified 905.41643 0.41643309 529 P68363 TUBA1B Tubulin alpha-1B chain no no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 40.17 40.546 2 0.022061 4198 Miao_Sh-H9_Flag_mass3_141226_03 74.464 43.175 0 0 0 0 0 0 0 0 0 0 0 0 0 619 529 608 5728;5729 6470;6471 6471 2 EDMAALEK Oxidation (M) 921.41135 0.41134771 529 P68363 TUBA1B Tubulin alpha-1B chain no no 0 0 1 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 29.025 29.125 2 0.042803 2780 Miao_Sh-H9_Flag_mass3_141226_02 63.216 24.424 706.58 100.16 0 0 88.918 0 0 0 256.93 260.57 0 0 0 620 529 608 5730;5731;5732;5733 6472 6472 1 EDPTVSALLTSEK Unmodified 1388.7035 0.70349021 532 P78417;Q5TA02;P78417-2;P78417-3;Q5TA01 GSTO1 Glutathione S-transferase omega-1 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 65.772 66.411 2 0.013999 12603 Miao_Sh-H9_Flag_mass3_141226_03 54.09 37.74 5025.1 1697.8 0 0 0 0 0 750.93 0 0 1374.3 0 1202 621 532 609 5734;5735;5736;5737;5738;5739 6473;6474;6475 6475 2 EDQSILCTGESGAGK Unmodified 1550.6883 0.68825085 433;434;158 P35579;P35579-2;Q5BKV1;P35580;P35580-3;P35580-2;F8W6L6;P35580-4;E7ERA5;Q7Z406;F2Z2U8;G8JLL9;Q7Z406-6;Q7Z406-2;Q7Z406-5;Q7Z406-4;M0QY43 MYH9;MYH10;MYH14 Myosin-9;Myosin-10;Myosin-14 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 44.056 44.933 2 4.1397E-08 5692 Miao_Sh-H9_Flag_mass3_141226_01 95.236 72.224 926.62 0 0 0 0 0 0 0 774.46 0 0 0 152.17 622 433;434;158 610 5740;5741;5742 6476;6477 6476 2 EDQTEYLEER Unmodified 1310.5626 0.56263964 344;341 P07900;P07900-2;Q86U12;G3V2J8;Q58FF6;P08238;Q58FF7;Q5T9W8 HSP90AA1;HSP90AB4P;HSP90AB1;HSP90AB3P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-beta 4;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 2 1 1 1 1 1 1 2 43.786 46.016 2 1.8353E-25 9897 Miao_Sh-c_proteinG_mass3_141226_03 176.45 121.47 13225 0 0 96.699 336.6 428.28 3584 82.047 433.31 0 1766.3 4098.1 2399.8 623 341;344 611 5743;5744;5745;5746;5747;5748;5749;5750;5751;5752;5753;5754 6478;6479;6480;6481;6482;6483 6478 6 EDSQRPGAHLTVK Unmodified 1436.7372 0.73719038 180 P09651;F8W6I7;P09651-3;P09651-2;F8VZ49;Q32P51;F8VYN5;F8W646 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 1 3 1 1 2 4 2 30.503 32.535 2;3;4 9.3276E-05 5967 Miao_Sh-H9_proteinG_mass3_141226_02 85.163 51.971 63249 0 0 34.574 1154.2 668.27 28891 0 239.36 193.44 21266 0 10803 624 180 612 5755;5756;5757;5758;5759;5760;5761;5762;5763;5764;5765;5766;5767;5768;5769;5770;5771 6484;6485;6486;6487;6488;6489;6490;6491;6492;6493;6494;6495 6489 12 EDSVKPGAHLTVK Unmodified 1379.7409 0.74087877 470 P51991;P51991-2 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 33.833 34.765 2 0.0010385 7066 Miao_Sh-H9_proteinG_mass3_141226_01 101.43 81.321 4242.5 0 15.781 0 0 0 0 0 30.749 0 1453.2 1567.6 1175.1 625 470 613 5772;5773;5774;5775;5776;5777 6496;6497;6498;6499;6500;6501 6499 6 EDTEEYNLR Unmodified 1167.5044 0.50439647 470 P51991;P51991-2 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 39.92 42.918 2 0.00014356 8997 Miao_Sh-H9_proteinG_mass3_141226_03 126.24 98.161 13610 0 0 0 214.97 137.94 2885.4 0 0 0 2343.9 5307.4 2720.9 626 470 614 5778;5779;5780;5781;5782;5783 6502;6503;6504;6505;6506;6507;6508 6507 7 EDVFVHQTAIK Unmodified 1285.6667 0.6666512 381;525 P16989;P16989-2;P16989-3;Q9Y2T7;P67809;H0Y449 YBX3;YBX2;YBX1 Y-box-binding protein 3;Y-box-binding protein 2;Nuclease-sensitive element-binding protein 1 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 2 1 1 47.705 48.123 2 4.4107E-06 11581 Miao_Sh-H9_proteinG_mass3_141226_01 133.05 88.186 3100.8 0 0 259.83 0 0 0 0 368.44 0 2472.6 0 0 627 381;525 615 5784;5785;5786;5787;5788 6509;6510;6511 6511 3 EEADEYIDIGALNGIFVLGR Unmodified 2193.0954 0.095363533 476 P53396;P53396-2;B4E3P0 ACLY ATP-citrate synthase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 110.63 110.08 3 0.054088 26668 Miao_Sh-H9_Flag_mass3_141226_01 30.489 24.526 0 0 0 0 0 0 0 0 0 0 0 0 0 628 476 616 5789 6512 6512 1 EEAENTLQSFR Unmodified 1322.6103 0.61025853 346 P08670;B0YJC4;B0YJC5;Q5JVS8 VIM Vimentin yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 52.966 54.27 2 2.9031E-30 12999 Miao_Sh-H9_proteinG_mass3_141226_03 172.13 127.26 22652 0 426.86 0 0 1902.1 0 3351.5 7466.2 0 0 0 9504.8 629 346 617 5790;5791;5792;5793;5794;5795 6513;6514;6515;6516;6517 6516 5 EEASTSLPTKPTQGASSASEPQEAPPKPAEDK Unmodified 3264.5634 0.5633745 26 O96005;B4DDS3;F5H8J3 CLPTM1 Cleft lip and palate transmembrane protein 1 yes no 0 0 0 0 2 By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 44.588 43.919 4 0.00042107 4945 Miao_Sh-H9_Flag_mass3_141226_01 34.861 29.629 2215.5 0 0 0 0 0 0 702.2 861.91 651.35 0 0 0 630 26 618 5796;5797;5798 6518;6519 6518 1 EEEEGISQESSEEEQ Unmodified 1737.6701 0.67007741 384;383 P17096-2;P17096 HMGA1 High mobility group protein HMG-I/HMG-Y no no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 2 2 39.075 40.097 2 6.2328E-08 8516 Miao_Sh-H9_proteinG_mass3_141226_02 93.237 81.032 1644.6 118.65 69.469 0 335.77 0 0 0 0 0 608.35 0 512.34 631 384;383 619 5799;5800;5801;5802;5803;5804;5805;5806 6520;6521;6522;6523 6521 4 EEEIAALVIDNGSGMCK Acetyl (Protein N-term);Oxidation (M) 1892.8496 0.84957888 524 P63261;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65 ACTG1 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed yes no 1 0 1 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 95.863 97.217 2 0.013069 23105 Miao_Sh-c_proteinG_mass3_141226_01 43.37 35.245 0 0 0 0 0 0 0 0 0 0 0 0 0 632 524 620 5807 6524 6524 67 1 EEILAQAK Unmodified 900.49165 0.49164694 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1 36.452 38.324 2 0.00064674 7933 Miao_Sh-H9_proteinG_mass3_141226_02 129.56 90.601 33134 1106 916.78 919.33 1175.6 1070.2 9578.7 0 0 1032.3 0 8793.8 8540.9 633 433 621 5808;5809;5810;5811;5812;5813;5814;5815;5816 6525;6526;6527;6528;6529;6530;6531;6532;6533;6534;6535 6532 11 EEIVQFFSGLEIVPNGITLPVDFQGR Unmodified 2903.5069 0.50690966 199 P31943;G8JLB6;E9PCY7;D6RIU0;D6RBM0;E5RGH4;E5RGV0;D6RFM3 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 115.96 116.55 3 8.3675E-20 30044 Miao_Sh-H9_Flag_mass3_141226_02 85.407 76.027 0 0 0 0 0 0 0 0 0 0 0 0 0 634 199 622 5817;5818;5819 6536;6537;6538 6538 3 EEIVQFFSGLEIVPNGITLPVDPEGK Unmodified 2826.4691 0.46912717 472 P52597 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 114.5 114.15 3 3.9521E-11 28172 Miao_Sh-H9_Flag_mass3_141226_01 64.16 56.408 1590.5 0 0 0 0 0 0 1590.5 0 0 0 0 0 635 472 623 5820;5821 6539;6540 6539 1 EELAYLR Unmodified 892.46543 0.46543219 102 P08779;CON__P08779;K7ENW6 KRT16 Keratin, type I cytoskeletal 16 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 2 1 50.291 52.985 2 0.019266 12192 Miao_Sh-c_proteinG_mass3_141226_03 94.407 15.291 3111.2 0 0 0 257.22 0 1707.7 0 0 0 501.01 645.28 0 + 636 102 624 5822;5823;5824;5825;5826 6541;6542;6543 6542 3 EELLSQIR Unmodified 986.53966 0.53965977 10 Q9Y608;Q9Y608-2;A8MXR0;Q9Y608-4;H7C3N9 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 2 55.443 57.598 2 1.5206E-11 14828 Miao_Sh-H9_proteinG_mass3_141226_02 137.9 0.77374 17048 0 0 225.46 0 0 5090.4 0 1199.9 0 6127.3 0 4404.5 637 10 625 5827;5828;5829;5830;5831;5832;5833;5834 6544;6545;6546;6547;6548;6549;6550;6551;6552;6553 6551 10 EELNLTANR Unmodified 1058.5356 0.53563702 306 O95816;B4DXE2 BAG2 BAG family molecular chaperone regulator 2 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 1 44.908 45.917 2 4.5727E-51 5464 Miao_Sh-H9_Flag_mass3_141226_03 202.44 92.131 30981 0 4911.3 4706 93.626 201.45 0 0 9414.2 10819 835.02 0 0 638 306 626 5835;5836;5837;5838;5839;5840;5841 6554;6555;6556;6557;6558;6559;6560;6561;6562;6563;6564 6563 11 EELPVIPK Unmodified 923.53278 0.53278348 649 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 50.959 56.824 2 0.051284 13460 Miao_Sh-c_proteinG_mass3_141226_03 58.815 41.522 0 0 0 0 0 0 0 0 0 0 0 0 0 639 649 627 5842 6565 6565 1 EELSNVLAAMR Unmodified 1231.6231 0.62307182 681 Q9Y3U8 RPL36 60S ribosomal protein L36 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 1 1 1 1 1 1 1 72.757 68.195 2 0.0036455 16467 Miao_Sh-c_proteinG_mass3_141226_01 90.306 53.737 7555.6 0 638.39 692.81 1834.4 0 935.18 575.4 410.65 787.39 1047.8 0 633.55 640 681 628 5843;5844;5845;5846;5847;5848;5849;5850;5851;5852 6566;6567;6568 6566 3 EENVEIHQTLDQTLLELNNL Unmodified 2364.1809 0.18088408 342 P07951-2;Q5TCU3;P07951-3 TPM2 Tropomyosin beta chain yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 115.98 98.785 3 0.051283 37162 Miao_Sh-H9_proteinG_mass3_141226_03 31.138 18.1 0 0 0 0 0 0 0 0 0 0 0 0 0 + 641 342 629 5853 6569 6569 1 EESGKPGAHVTVK Unmodified 1337.6939 0.69392858 397 P22626;P22626-2 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 25.836 27.314 2 0.001221 5018 Miao_Sh-c_proteinG_mass3_141226_03 97.297 58.993 1359.3 0 0 0 0 0 0 0 0 0 0 595.24 764.08 642 397 630 5854;5855;5856 6570;6571;6572 6570 3 EESTTGFDK Unmodified 1012.4349 0.43491993 677 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 31.099 31.119 2 0.011686 2978 Miao_Sh-c_Flag_mass3_141226_02 77.662 61.369 1639.1 0 0 0 0 0 0 288.68 448.65 424.29 44.409 0 433.07 643 677 631 5857;5858;5859;5860;5861;5862 6573;6574 6573 2 EEVGEEAIVELVENGK Unmodified 1742.8574 0.85742467 433 P35579;Q5BKV1;B1AH99 MYH9 Myosin-9 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 4 3 8 1 2 2 2 3 104.37 96.705 2;3 5.1086E-131 34670 Miao_Sh-H9_proteinG_mass3_141226_02 233.43 169.96 92402 0 0 0 24959 0 1863.6 0 0 0 25915 29827 9836.8 644 433 632 5863;5864;5865;5866;5867;5868;5869;5870;5871;5872;5873;5874;5875;5876;5877;5878;5879;5880;5881;5882;5883;5884;5885;5886;5887;5888;5889 6575;6576;6577;6578;6579;6580;6581;6582;6583;6584;6585;6586;6587;6588;6589;6590;6591;6592;6593;6594;6595;6596;6597;6598;6599;6600;6601;6602;6603;6604;6605;6606;6607;6608;6609;6610;6611;6612;6613;6614;6615;6616;6617;6618;6619;6620 6600 46 EEVGEEAIVELVENGKK Unmodified 1870.9524 0.95238769 433 P35579;Q5BKV1;B1AH99 MYH9 Myosin-9 yes no 0 0 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 1 1 1 1 1 1 1 1 4 92.964 87.326 3 5.794E-43 34120 Miao_Sh-H9_proteinG_mass3_141226_01 169.92 128.68 224800 961.61 7377.6 9983.7 26860 22866 21931 13407 11653 15576 39952 26448 27783 645 433 633 5890;5891;5892;5893;5894;5895;5896;5897;5898;5899;5900;5901;5902;5903;5904;5905;5906;5907;5908 6621;6622;6623;6624;6625;6626;6627;6628;6629;6630;6631;6632;6633;6634;6635;6636;6637;6638;6639;6640;6641;6642;6643;6644;6645;6646;6647;6648;6649 6637 29 EEYITSALESTEEK Unmodified 1627.7465 0.74647724 473 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 2 3 1 71.84 65.625 2 8.8102E-07 12079 Miao_Sh-H9_Flag_mass3_141226_01 127.36 109.66 7711.8 0 0 0 0 0 0 3631.9 3800.4 0 0 0 279.48 646 473 634 5909;5910;5911;5912;5913;5914;5915;5916;5917 6650;6651;6652;6653;6654;6655;6656;6657 6652 8 EFLHAQEEVK Unmodified 1228.6088 0.60880197 453 P43686 PSMC4 26S protease regulatory subunit 6B yes yes 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 36.925 40.016 3 0.047256 4278 Miao_Sh-c_Flag_mass3_141226_03 39.625 19.418 930.68 0 0 560.58 0 0 136.15 0 0 0 0 233.94 0 647 453 635 5918;5919;5920 6658 6658 1 EFNEDGALAVLQQFK Unmodified 1707.8468 0.84680041 286 O60506-4;O60506-3;O60506;O60506-2;F6UXX1 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 2 3 1 3 1 99.628 99.032 2;3 3.2656E-37 37055 Miao_Sh-H9_proteinG_mass3_141226_02 130.27 95.519 23958 0 0 1481.5 8798.5 4042 0 0 0 1145.7 3712 4778.3 0 648 286 636 5921;5922;5923;5924;5925;5926;5927;5928;5929;5930;5931 6659;6660;6661;6662;6663;6664;6665 6665 6 EFSGNPIK Unmodified 890.44978 0.44978213 435 P35637;P35637-2;H3BPE7 FUS RNA-binding protein FUS yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 39.321 41.176 2 0.0097158 9030 Miao_Sh-H9_proteinG_mass3_141226_02 91.318 48.195 21348 0 546.98 97.295 726.91 580.53 0 0 0 0 10233 8560.4 602.78 649 435 637 5932;5933;5934;5935;5936;5937;5938 6666;6667;6668;6669 6668 4 EFSITDVVPYPISLR Unmodified 1734.9192 0.91923707 431 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 102.07 102.02 2 0.036247 24696 Miao_Sh-H9_Flag_mass3_141226_03 42.947 35.817 0 0 0 0 0 0 0 0 0 0 0 0 0 650 431 638 5939 6670 6670 1 EFSPFGTITSAK Unmodified 1283.6398 0.63976774 359 P11940;P11940-2;E7EQV3;E7ERJ7;H0YAR2;H0YAP2;H0YB86 PABPC1 Polyadenylate-binding protein 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 1 1 2 1 1 1 1 1 71.15 72.545 2 0.00093689 19162 Miao_Sh-c_proteinG_mass3_141226_03 85.672 50.87 11163 0 0 0 0 351.3 0 2244 0 887.43 4222.3 706.27 2751.6 651 359 639 5940;5941;5942;5943;5944;5945;5946;5947;5948 6671;6672;6673;6674;6675;6676 6673 6 EFTNVYIK Unmodified 1012.5229 0.52294707 359 P11940;P11940-2;E7EQV3;E7ERJ7;H0YAR2;H0YBN4;H0Y5F5;H0YCC8 PABPC1;PABPC4 Polyadenylate-binding protein 1 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 56.512 57.681 2 0.00068488 14968 Miao_Sh-H9_proteinG_mass3_141226_01 126.62 91.42 7058.2 485.92 0 0 0 0 0 0 0 0 2853.6 0 3718.7 652 359 640 5949;5950;5951 6677 6677 1 EGAFSNFPISEETIK Unmodified 1667.8043 0.80426689 652 Q9NR30;Q9NR30-2;Q9BQ39 DDX21;DDX50 Nucleolar RNA helicase 2;ATP-dependent RNA helicase DDX50 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 84.736 79.957 2 0.028484 15895 Miao_Sh-c_proteinG_mass3_141226_01 47.64 31.699 5685.2 0 0 401.67 3821.5 0 0 0 0 0 0 0 1462 653 652 641 5952;5953;5954 6678 6678 1 EGEFVAQFK Unmodified 1053.5131 0.51311067 669 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching 1 1 55.731 58.262 2 0.00048708 14101 Miao_Sh-c_proteinG_mass3_141226_03 105.94 76.519 0 0 0 0 0 0 0 0 0 0 0 0 0 654 669 642 5955;5956 6679;6680 6679 2 EGIEWNFIDFGLDLQPCIDLIEK Unmodified 2763.3466 0.3465692 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 118.45 118.2 3 0.043364 29638 Miao_Sh-H9_Flag_mass3_141226_01 26.789 20.697 0 0 0 0 0 0 0 0 0 0 0 0 0 655 433 643 5957 6681 6681 1 EGIPPDQQR Unmodified 1038.5094 0.50942227 45;239 P0CG47;P62979;P62987;J3QS39;J3QTR3;F5H6Q2;F5GYU3;F5H2Z3;F5H265;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q96C32;F5H041;P0CG48;M0R1V7;F5GZ39;M0R1M6;M0R2S1;J3QLP7;J3QSA3;J3QRK5;K7EMA8 UBB;RPS27A;UBA52;UBC;UBBP4 Polyubiquitin-B;Ubiquitin;Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-C;Ubiquitin no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 5 10 12 5 4 11 6 12 3 1 34.698 35.249 2 1.5585E-06 2907 Miao_Sh-H9_Flag_mass3_141226_02 139.38 97.934 47998 7904.2 9693.2 10151 579.35 1099.7 0 3602.1 9839 3149.6 1316.8 662.32 0 656 45;239 644 5958;5959;5960;5961;5962;5963;5964;5965;5966;5967;5968;5969;5970;5971;5972;5973;5974;5975;5976;5977;5978;5979;5980;5981;5982;5983;5984;5985;5986;5987;5988;5989;5990;5991;5992;5993;5994;5995;5996;5997;5998;5999;6000;6001;6002;6003;6004;6005;6006;6007;6008;6009;6010;6011;6012;6013;6014;6015;6016;6017;6018;6019;6020;6021;6022;6023;6024;6025;6026 6682;6683;6684;6685;6686;6687;6688;6689;6690;6691;6692;6693;6694;6695;6696;6697;6698;6699;6700;6701;6702;6703;6704;6705;6706;6707;6708;6709;6710;6711;6712;6713;6714;6715;6716;6717;6718;6719;6720;6721;6722;6723;6724;6725;6726;6727;6728;6729;6730;6731;6732;6733;6734;6735;6736;6737;6738;6739;6740;6741;6742;6743;6744;6745;6746;6747;6748;6749;6750;6751;6752;6753;6754;6755;6756;6757;6758;6759;6760;6761;6762;6763;6764;6765;6766;6767;6768;6769;6770;6771;6772;6773;6774;6775;6776;6777;6778;6779;6780;6781;6782;6783;6784;6785;6786;6787;6788;6789;6790;6791;6792;6793;6794;6795;6796;6797;6798;6799;6800;6801;6802;6803;6804;6805;6806;6807;6808;6809;6810;6811;6812;6813;6814;6815;6816;6817;6818;6819;6820;6821;6822;6823;6824;6825;6826;6827;6828 6791 147 EGIVALR Unmodified 756.44939 0.4493882 444 P40227;B4DPJ8;P40227-2 CCT6A T-complex protein 1 subunit zeta yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 45.496 47.276 2 0.049239 11529 Miao_Sh-H9_proteinG_mass3_141226_01 71.715 8.4277 2998.2 0 0 0 0 0 0 0 0 0 1095.7 1902.5 0 657 444 645 6027;6028 6829 6829 1 EGLELLK Unmodified 800.46437 0.46436956 333 P06733;P06733-2 ENO1 Alpha-enolase yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 1 1 2 2 1 1 1 1 1 57.233 58.79 2 0.0078875 15552 Miao_Sh-H9_proteinG_mass3_141226_02 108.09 13.686 75986 2210.9 2822.3 2321.1 1095.8 1020.5 14419 3504.4 4800.2 3847.1 15783 10802 13360 658 333 646 6029;6030;6031;6032;6033;6034;6035;6036;6037;6038;6039;6040;6041;6042;6043;6044 6830;6831;6832;6833;6834;6835;6836;6837;6838;6839;6840 6839 10 EGLELPEDEEEK Unmodified 1415.6304 0.63038485 344;341 P07900;P07900-2;Q86U12;Q58FG0;Q58FF6;P08238;Q58FF7 HSP90AA1;HSP90AA5P;HSP90AB4P;HSP90AB1;HSP90AB3P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5;Putative heat shock protein HSP 90-beta 4;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 no no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 2 1 1 2 53.883 55.804 2 3.1609E-31 14066 Miao_Sh-H9_proteinG_mass3_141226_02 171.62 134.47 53189 0 2087.1 0 0 0 11576 0 676.17 0 15792 13479 9579.4 659 341;344 647 6045;6046;6047;6048;6049;6050;6051;6052;6053 6841;6842;6843;6844;6845;6846;6847;6848;6849;6850 6847 10 EGLLLWCQR Unmodified 1173.5965 0.59646314 283;362 O43707;P35609;P35609-2;Q08043;G3V2W4;G3V2N5;G3V2X9;P12814;P12814-2;P12814-3;P12814-4;H9KV75 ACTN4;ACTN2;ACTN3;ACTN1 Alpha-actinin-4;Alpha-actinin-2;Alpha-actinin-3;Alpha-actinin-1 no no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 76.166 77.62 2 0.051926 15811 Miao_Sh-c_proteinG_mass3_141226_01 54.191 23.578 0 0 0 0 0 0 0 0 0 0 0 0 0 660 283;362 648 6054 6851 6851 1 EGLPVALDK Unmodified 940.52295 0.52294707 670 Q9Y224 C14orf166 UPF0568 protein C14orf166 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 53.941 56.247 2 4.7199E-06 14690 Miao_Sh-H9_proteinG_mass3_141226_01 122.96 86.581 23533 0 0 0 0 0 7544.5 1053.8 0 314.2 0 7961.8 6658.7 661 670 649 6055;6056;6057;6058;6059;6060 6852;6853;6854;6855;6856;6857 6853 6 EGNGTVMGAELR Oxidation (M) 1248.5768 0.57684991 328 P08590;P05976;P05976-2 MYL3;MYL1 Myosin light chain 3;Myosin light chain 1/3, skeletal muscle isoform yes no 0 0 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 2 2 2 1 2 1 2 1 2 1 2 35.102 36.45 2 0.00257 7622 Miao_Sh-H9_proteinG_mass3_141226_01 80.815 53.814 17228 612.95 705.81 787.21 476.75 430.29 3123.6 666.23 1245.3 642.56 3126.4 2823.8 2587 662 328 650 6061;6062;6063;6064;6065;6066;6067;6068;6069;6070;6071;6072;6073;6074;6075;6076;6077;6078;6079 6858;6859;6860;6861;6862;6863;6864;6865;6866;6867;6868;6869 6868 42 11 EGNGTVMGAELR Unmodified 1232.5819 0.58193529 328 P08590;P05976;P05976-2 MYL3;MYL1 Myosin light chain 3;Myosin light chain 1/3, skeletal muscle isoform yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 2 2 2 2 1 1 2 2 45.011 46.345 2 0.00069046 5225 Miao_Sh-c_Flag_mass3_141226_01 110.8 71.016 25663 1597.9 1324.9 1108 1249.4 1009 1399.1 2572 2352.2 2353.3 10697 0 0 663 328 650 6080;6081;6082;6083;6084;6085;6086;6087;6088;6089;6090;6091;6092;6093;6094;6095;6096 6870;6871;6872;6873;6874;6875;6876;6877;6878;6879;6880;6881;6882 6870 13 EGPYDVVVLPGGNLGAQNLSESAAVK Unmodified 2583.318 0.31804626 247 Q99497;K7EN27 PARK7 Protein DJ-1 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching 1 1 80.68 85.241 3 0.021238 29220 Miao_Sh-H9_proteinG_mass3_141226_02 27.753 19.469 1261 0 0 0 0 1261 0 0 0 0 0 0 0 664 247 651 6097;6098 6883;6884 6884 2 EGRPSGEAFVELESEDEVK Unmodified 2105.9753 0.97530798 199 P31943;G8JLB6;E9PCY7;D6RIU0;D6RBM0;D6RFM3;E7EQJ0;D6RAM1;D6R9T0;D6RIT2;E7EN40;D6RDU3;D6RJ04;D6RIH9;D6RDL0 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 0 0 0 0 1 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching 1 1 2 1 1 2 2 1 1 73.387 70.444 3 3.4984E-08 10167 Miao_Sh-c_Flag_mass3_141226_02 80.236 49.752 19307 1932.3 0 1674.9 0 2613.5 3524.9 4615.9 0 0 4453.4 0 491.92 665 199 652 6099;6100;6101;6102;6103;6104;6105;6106;6107;6108;6109;6110 6885;6886;6887;6888;6889;6890 6886 5 EGVHGGLINK Unmodified 1022.5509 0.55089316 339 P07737;K7EJ44 PFN1 Profilin-1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 31.611 33.365 2 0.017525 6270 Miao_Sh-H9_proteinG_mass3_141226_03 66.568 27.749 0 0 0 0 0 0 0 0 0 0 0 0 0 666 339 653 6111 6891 6891 1 EHALLAYTLGVK Unmodified 1313.7343 0.73433683 527 P68104;Q5VTE0;Q05639 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 2 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 2 6 2 2 4 7 4 77.256 73.729 2;3 4.2702E-37 12247 Miao_Sh-H9_Flag_mass3_141226_02 174.05 140.96 125960 11208 9671.2 7596.7 8475.4 10490 6014.7 8606.5 16117 17602 18435 6434.7 5311.7 667 527 654 6112;6113;6114;6115;6116;6117;6118;6119;6120;6121;6122;6123;6124;6125;6126;6127;6128;6129;6130;6131;6132;6133;6134;6135;6136;6137;6138;6139;6140;6141;6142;6143;6144;6145;6146 6892;6893;6894;6895;6896;6897;6898;6899;6900;6901;6902;6903;6904;6905;6906;6907;6908;6909;6910;6911;6912;6913;6914;6915;6916;6917;6918;6919;6920;6921;6922;6923;6924;6925;6926;6927;6928;6929;6930;6931;6932;6933;6934;6935 6914 42 EHLLSYLEK Unmodified 1130.5972 0.59717465 657 Q9NYL9 TMOD3 Tropomodulin-3 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 58.229 58.64 3 0.011556 9065 Miao_Sh-c_proteinG_mass3_141226_01 65.224 11.67 3577.3 0 120.25 163.04 812.29 0 0 0 824.17 1657.6 0 0 0 668 657 655 6147;6148;6149;6150;6151 6936 6936 1 EHVEEISELFYDAK Unmodified 1707.7992 0.79918151 672 Q9Y265;H7C4G5 RUVBL1 RuvB-like 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 108.51 95.623 3 0.0019761 33433 Miao_Sh-H9_proteinG_mass3_141226_01 65.219 38.432 0 0 0 0 0 0 0 0 0 0 0 0 0 669 672 656 6152;6153 6937;6938 6938 2 EHVIEALR Unmodified 965.52943 0.52942943 182 P27635;H7C123;H7C2C5;F8W7C6;X1WI28 RPL10 60S ribosomal protein L10 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 39.118 39.97 2 0.046544 8902 Miao_Sh-H9_proteinG_mass3_141226_01 60.436 36.464 0 0 0 0 0 0 0 0 0 0 0 0 0 670 182 657 6154 6939 6939 1 EIAEAYLGK Unmodified 992.51786 0.51786169 356 P11142;E9PKE3;P11142-2;E9PN89;E9PLF4;E9PI65;E9PQQ4;E9PQK7;E9PK54;E9PPY6 HSPA8 Heat shock cognate 71 kDa protein yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 1 1 2 1 2 1 1 1 1 50.38 51.802 2 0.00023247 11376 Miao_Sh-c_proteinG_mass3_141226_03 123.21 44.944 79674 4575.8 3324 3441.5 1034.9 0 16920 1258.8 7247.4 6658.1 2254.6 16590 16369 671 356 658 6155;6156;6157;6158;6159;6160;6161;6162;6163;6164;6165;6166;6167;6168 6940;6941;6942;6943;6944;6945;6946;6947;6948;6949;6950;6951 6946 12 EIAEAYLGYPVTNAVITVPAYFNDSQR Unmodified 3000.4869 0.4869025 343 P08107;E7EP94 HSPA1A Heat shock 70 kDa protein 1A/1B yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 103.99 103.69 3 0.012776 25139 Miao_Sh-H9_Flag_mass3_141226_02 28.047 23.291 0 0 0 0 0 0 0 0 0 0 0 0 0 672 343 659 6169 6952 6952 1 EIAENALGK Unmodified 943.49746 0.4974606 426 P31942;P31942-2;P31942-3 HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 38.342 39.194 2 0.0052261 8577 Miao_Sh-H9_proteinG_mass3_141226_01 86.136 7.9573 0 0 0 0 0 0 0 0 0 0 0 0 0 673 426 660 6170 6953 6953 1 EIAQDFK Unmodified 849.42323 0.42323303 28 P68431;P84243;Q71DI3;Q16695;K7EMV3;B4DEB1;K7EK07;K7ES00 HIST1H3A;H3F3A;HIST2H3A;HIST3H3;H3F3B Histone H3.1;Histone H3.3;Histone H3.2;Histone H3.1t;Histone H3 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 38.647 40.076 2 0.0007807 7694 Miao_Sh-c_proteinG_mass3_141226_03 120.62 8.9727 15089 0 0 0 0 684.05 0 503.44 0 580.89 5242.3 4236.7 3842 674 28 661 6171;6172;6173;6174;6175;6176;6177 6954;6955;6956 6954 3 EIDLVNRDPK Unmodified 1197.6354 0.63535107 543 Q03135;C9JKI3;E9PCT5;Q03135-2;P56539 CAV1;CAV3 Caveolin-1;Caveolin;Caveolin-3 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 41.719 42.371 3 0.023275 4624 Miao_Sh-H9_Flag_mass3_141226_03 63.076 26.694 5221.4 0 0 0 96.146 0 0 0 1620.8 1793.3 0 1711.2 0 675 543 662 6178;6179;6180;6181 6957 6957 1 EIEGEEIEIVLAKPPDK Unmodified 1908.0092 0.0091742879 281 O43390;O43390-2;O43390-4;O43390-3;B4DT28;E7ETM7 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 2 99.898 87.718 3 0.0047536 30922 Miao_Sh-H9_proteinG_mass3_141226_01 52.862 19.929 1650.6 0 0 0 0 0 0 0 0 0 1650.6 0 0 676 281 663 6182;6183 6958;6959;6960 6958 3 EIETYHNLLEGGQEDFESSGAGK Unmodified 2509.1245 0.12449141 432 P35527;CON__P35527;K7EQQ3 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 2 2 88.02 80.232 3 2.1727E-72 28015 Miao_Sh-H9_proteinG_mass3_141226_01 177.36 163.22 200800 0 0 7416.8 39716 0 0 3126.6 0 0 38283 70331 41925 + 677 432 664 6184;6185;6186;6187;6188;6189;6190;6191 6961;6962;6963;6964;6965;6966;6967;6968;6969;6970;6971;6972;6973;6974;6975;6976;6977;6978;6979;6980;6981;6982;6983 6966 23 EIFLSQPILLELEAPLK Unmodified 1952.1234 0.12341618 497 P62136;E9PMD7;P62136-2;P62140;P36873;F8VYE8;F8W0W8;P36873-2;C9J9S3;C9JP48;E7ETD8;F8VR82;F8WE71;F5H1L6;F5H037 PPP1CA;PPP1CB;PPP1CC Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 2 2 1 2 1 1 111.65 111.84 2;3 3.8232E-06 28546 Miao_Sh-H9_Flag_mass3_141226_02 97.214 81.37 17415 2737.4 4808.5 0 317.02 0 0 5599.4 3518.4 433.98 0 0 0 678 497 665 6192;6193;6194;6195;6196;6197;6198;6199;6200 6984;6985 6985 2 EIFNFVLK Unmodified 1008.5644 0.56441796 533 P78527;E7EUY0;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 2 1 85.626 82.869 2 0.0036873 18500 Miao_Sh-H9_Flag_mass3_141226_02 96.492 41.051 7523.8 0 0 1833.3 0 0 0 2076.2 0 0 0 3614.2 0 679 533 666 6201;6202;6203;6204;6205 6986;6987;6988 6988 3 EIIDLVLDR Unmodified 1084.6128 0.61282471 529 P68363 TUBA1B Tubulin alpha-1B chain no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 3 1 1 1 1 1 2 1 1 88.194 84.628 2 7.4178E-158 15812 Miao_Sh-c_Flag_mass3_141226_02 265.58 158.29 320090 29302 30067 33052 31617 13896 21069 0 36319 38336 38318 24364 23747 680 529 667 6206;6207;6208;6209;6210;6211;6212;6213;6214;6215;6216;6217;6218;6219;6220;6221 6989;6990;6991;6992;6993;6994;6995;6996;6997;6998;6999;7000;7001;7002;7003;7004;7005;7006;7007;7008;7009;7010;7011;7012;7013;7014;7015;7016;7017;7018;7019;7020;7021;7022;7023;7024;7025;7026;7027;7028;7029;7030;7031;7032 6992 44 EILGTAQSVGCNVDGR Unmodified 1674.7995 0.79953264 424 P30050;P30050-2 RPL12 60S ribosomal protein L12 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 2 2 1 2 1 1 1 2 1 1 53.339 55.114 2;3 0.0019971 13417 Miao_Sh-H9_proteinG_mass3_141226_03 55.975 42.229 16571 0 1030.9 1872.9 1054.8 1049 1568.6 0 696.57 1004.2 3760.9 2541.7 1991.5 681 424 668 6222;6223;6224;6225;6226;6227;6228;6229;6230;6231;6232;6233;6234;6235 7033;7034;7035;7036 7036 4 EILIPVFK Unmodified 957.5899 0.58990443 476 P53396;P53396-2;B4E3P0 ACLY ATP-citrate synthase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 106.92 94.74 2 0.056109 33878 Miao_Sh-H9_proteinG_mass3_141226_01 57.177 7.0509 0 0 0 0 0 0 0 0 0 0 0 0 0 682 476 669 6236 7037 7037 1 EILQEEEDLAEIVQLVGK Unmodified 2054.0783 0.078316486 59 P38606;B7Z1R5 ATP6V1A V-type proton ATPase catalytic subunit A yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 112.44 111.99 3 0.0042284 27389 Miao_Sh-H9_Flag_mass3_141226_01 46.121 32.18 0 0 0 0 0 0 0 0 0 0 0 0 0 683 59 670 6237 7038 7038 1 EILSEVER Unmodified 973.50803 0.50802529 43 P49368;B4DUR8;P49368-2 CCT3 T-complex protein 1 subunit gamma yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 46.686 48.327 2 0.0076501 12290 Miao_Sh-H9_proteinG_mass3_141226_01 91.318 8.112 6626 543.64 479.8 0 0 0 5219.4 0 0 383.15 0 0 0 684 43 671 6238;6239;6240;6241;6242;6243 7039;7040;7041 7040 3 EILVGDVGQTVDDPYATFVK Unmodified 2165.0892 0.089215523 404 P23528;G3V1A4;E9PP50;E9PK25;E9PQB7;E9PLJ3;E9PS23 CFL1 Cofilin-1 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 1 1 4 1 3 6 5 93.658 89.785 2;3 1.1152E-22 32994 Miao_Sh-H9_proteinG_mass3_141226_02 120.15 102.58 136450 16579 11855 12335 20193 10358 0 0 11473 12400 23550 4152 13560 685 404 672 6244;6245;6246;6247;6248;6249;6250;6251;6252;6253;6254;6255;6256;6257;6258;6259;6260;6261;6262;6263;6264;6265;6266;6267;6268;6269;6270;6271 7042;7043;7044;7045;7046;7047;7048;7049;7050;7051;7052;7053;7054;7055;7056;7057;7058;7059;7060;7061;7062;7063;7064;7065;7066;7067;7068;7069;7070;7071;7072;7073;7074;7075;7076 7067 35 EIQTAVR Unmodified 815.45012 0.45011648 37 Q93079;Q99879;Q99877;Q5QNW6;P58876;O60814;P62807;P57053;U3KQK0;B4DR52;Q5QNW6-2;Q99880;Q96A08 HIST1H2BH;HIST1H2BM;HIST1H2BN;HIST2H2BF;HIST1H2BD;HIST1H2BK;HIST1H2BC;H2BFS;HIST1H2BL;HIST1H2BA Histone H2B type 1-H;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-C/E/F/G/I;Histone H2B type F-S;Histone H2B;Histone H2B type 1-L;Histone H2B type 1-A no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 1 1 1 1 30.358 31.639 2 0.0034731 3302 Miao_Sh-c_Flag_mass3_141226_01 124.59 30.588 19612 974.69 881.78 950.27 661.33 792.57 4849 764.08 874.98 0 3135.4 3284.2 2443.9 686 37 673 6272;6273;6274;6275;6276;6277;6278;6279;6280;6281;6282 7077;7078;7079;7080;7081;7082;7083;7084;7085;7086;7087;7088;7089 7077 13 EISQEAR Unmodified 831.40865 0.4086456 167 P19474;F5H012;P19474-2 TRIM21 E3 ubiquitin-protein ligase TRIM21 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 25.734 26.118 2 0.013085 2530 Miao_Sh-c_Flag_mass3_141226_03 98.997 32.924 667.61 0 248.66 234.39 0 0 0 0 184.55 0 0 0 0 687 167 674 6283;6284;6285 7090 7090 1 EITALAPSTMK Oxidation (M) 1176.606 0.60602477 524;528 P63261;P60709;P63267-2;P68133;P68032;Q5T8M8;A6NL76;P63267;P62736;Q5T8M7 ACTG1;ACTB;ACTG2;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle no no 0 0 1 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 2 2 1 42.949 44.716 2 0.0014287 10753 Miao_Sh-H9_proteinG_mass3_141226_01 98.156 49.999 12323 652.77 0 0 672.44 361.55 4150.3 1042.9 1034.8 0 3031.5 0 1377 688 524;528 675 6286;6287;6288;6289;6290;6291;6292;6293;6294;6295;6296 7091;7092;7093;7094;7095;7096;7097;7098;7099;7100 7097 68 10 EITALAPSTMK Unmodified 1160.6111 0.61111015 524;528 P63261;P60709;P63267-2;P68133;P68032;Q5T8M8;A6NL76;P63267;P62736;Q5T8M7 ACTG1;ACTB;ACTG2;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching 2 1 2 1 2 2 3 1 1 51.226 52.75 2 0.0010571 6552 Miao_Sh-c_Flag_mass3_141226_03 101.35 59.923 32717 2303.7 2055.2 2479.5 1651.7 2075.9 6953.2 0 7307.1 1130.6 6760.6 0 0 689 524;528 675 6297;6298;6299;6300;6301;6302;6303;6304;6305;6306;6307;6308;6309;6310;6311 7101;7102;7103;7104;7105;7106;7107;7108;7109 7103 9 EIVHLQAGQCGNQIGAK Unmodified 1821.9156 0.91556545 530;315 P68371;M0R2D3;M0QY85;M0QZL7;M0R0X0;M0R2T4;M0QY37;M0QX14;P04350;M0R042;M0QYM7;M0R278 TUBB4B;TUBB4A Tubulin beta-4B chain;Tubulin beta-4A chain no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 2 1 1 1 1 1 44.691 46.682 3 2.3986E-13 5223 Miao_Sh-c_Flag_mass3_141226_02 97.45 74.593 3785.5 729.12 389.24 641.88 0 99.596 121.91 0 108.69 0 0 0 1695 690 530;315 676 6312;6313;6314;6315;6316;6317;6318;6319 7110;7111;7112 7111 3 EIVTNFLAGFEA Unmodified 1309.6554 0.65541781 410 P25705;P25705-2;P25705-3 ATP5A1 ATP synthase subunit alpha, mitochondrial yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 2 1 106.63 106.95 2 1.5802E-11 25532 Miao_Sh-H9_Flag_mass3_141226_01 150.09 127.53 19866 2613.3 2180.6 2198.4 1711.4 0 0 3440.5 3558.5 4163.4 0 0 0 691 410 677 6320;6321;6322;6323;6324;6325;6326;6327;6328;6329 7113;7114;7115;7116;7117;7118;7119;7120;7121;7122;7123;7124 7118 12 EIVVLETLEDIDK Unmodified 1514.808 0.80795528 579 Q15293;E9PP27;B7Z1M1 RCN1 Reticulocalbin-1 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 100.45 98.031 2 0.00040481 20603 Miao_Sh-c_Flag_mass3_141226_03 85.837 40.239 8148 0 0 2533.9 0 0 0 1851.1 780.18 2347.3 635.51 0 0 692 579 678 6330;6331;6332;6333;6334 7125;7126 7125 2 EIYLEVIHNLPDFELLSANTLEDR Unmodified 2842.4389 0.43888968 609 Q8IXB1;Q8IXB1-2 DNAJC10 DnaJ homolog subfamily C member 10 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS 2 1 1 107.87 101.51 3;4 4.248E-21 28510 Miao_Sh-c_proteinG_mass3_141226_01 90.694 78.246 10526 0 0 0 0 2657.5 0 0 0 0 0 0 7868 693 609 679 6335;6336;6337;6338 7127;7128;7129;7130;7131 7128 5 EKPYFPIPEEYTFIQNVPLEDR Unmodified 2723.3483 0.34828376 536 Q00839;Q00839-2 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 0 0 1 By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 95.261 96.614 3 1.1751E-30 37218 Miao_Sh-H9_proteinG_mass3_141226_01 116.28 99.691 11737 0 0 0 11737 0 0 0 0 0 0 0 0 694 536 680 6339;6340;6341;6342 7132;7133;7134;7135 7134 4 ELAEDGYSGVEVR Unmodified 1422.6627 0.66268803 402 P23396;F2Z2S8;H0YCJ7;E9PPU1;E9PL09;P23396-2;H0YF32;E9PQ96;E9PJH4;E9PK82;H0YEU2 RPS3 40S ribosomal protein S3 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 2 1 3 52.34 54.205 2 5.6935E-14 7561 Miao_Sh-H9_Flag_mass3_141226_03 143.25 109.5 26091 0 0 0 0 0 4864.7 2936.2 0 10438 6849.7 1002.2 0 695 402 681 6343;6344;6345;6346;6347;6348;6349;6350;6351 7136;7137;7138;7139;7140;7141;7142 7139 7 ELAEQTLNNIK Unmodified 1271.6721 0.67213051 622 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 57.692 58.143 2 0.0035718 14531 Miao_Sh-H9_proteinG_mass3_141226_01 90.689 33.486 3716.1 0 935.18 0 0 0 0 0 0 0 2780.9 0 0 696 622 682 6352;6353 7143 7143 1 ELALLEPEFILK Unmodified 1413.8119 0.81191845 639 Q99973;Q99973-2;G3V470;G3V5X7 TEP1 Telomerase protein component 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 97.803 100.51 2 0.0011601 24180 Miao_Sh-c_proteinG_mass3_141226_02 77.597 55.822 0 0 0 0 0 0 0 0 0 0 0 0 0 697 639 683 6354;6355 7144;7145 7145 2 ELAPYDENWFYTR Unmodified 1702.7627 0.76273643 442 P39019;M0R2L9;M0QXK4;M0QYF7;M0R140 RPS19 40S ribosomal protein S19 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 3 3 3 2 2 1 1 2 2 1 85.127 84.757 2;3 1.3352E-24 18204 Miao_Sh-c_proteinG_mass3_141226_01 162.31 137.18 157830 15439 13999 14078 41320 28025 423.9 6778.3 17738 19203 0 827.76 0 698 442 684 6356;6357;6358;6359;6360;6361;6362;6363;6364;6365;6366;6367;6368;6369;6370;6371;6372;6373;6374;6375 7146;7147;7148;7149;7150;7151;7152;7153;7154;7155;7156;7157;7158;7159;7160;7161;7162;7163;7164;7165;7166;7167;7168;7169;7170;7171;7172;7173;7174;7175;7176;7177;7178 7162 33 ELAQQIQK Unmodified 956.5291 0.52909508 488 P60842;J3QL43;J3KT12;P60842-2;Q14240;J3KTB5;E7EQG2;Q14240-2;J3QR64;J3QKZ9;J3QLN6;J3KS25;J3KSN7 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 34.805 35.239 2 0.0063238 3228 Miao_Sh-H9_Flag_mass3_141226_02 98.997 18.558 1057.9 0 0 0 0 0 0 0 363.94 397.85 0 0 296.12 699 488 685 6376;6377;6378 7179 7179 1 ELAQQVQQVADDYGK Unmodified 1690.8162 0.81622856 79 Q92841;Q92841-3;C9JMU5;H3BLZ8;Q92841-1;Q92841-2 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 1 1 69.605 70.5 2 0.00057167 18339 Miao_Sh-c_proteinG_mass3_141226_03 63.682 46.43 8249.6 620.1 257.05 0 1174.3 0 1053.6 2253.1 1237.3 1654.1 0 0 0 700 79 686 6379;6380;6381;6382;6383;6384;6385;6386 7180;7181 7180 1 ELDALDANDELTPLGR Unmodified 1740.853 0.853008 548 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 2 74.972 76.443 2 3.7499E-09 15329 Miao_Sh-c_proteinG_mass3_141226_01 106.35 78.071 0 0 0 0 0 0 0 0 0 0 0 0 0 701 548 687 6387;6388;6389 7182;7183;7184 7183 3 ELDDATEANEGLSR Unmodified 1518.6798 0.67979466 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 46.007 45.681 2 3.9864E-78 10099 Miao_Sh-H9_proteinG_mass3_141226_03 202.58 172.51 1046.9 0 377.92 0 0 0 0 0 668.94 0 0 0 0 702 434 688 6390;6391;6392 7185;7186 7186 2 ELDEEGSDPPLPGR Unmodified 1509.6947 0.69471644 82 Q9BRJ6;C9JQV0;H7C0T1;H7C2R9 C7orf50 Uncharacterized protein C7orf50 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 2 1 2 2 1 3 50.471 51.649 2 5.8943E-28 11343 Miao_Sh-c_proteinG_mass3_141226_03 157.33 112.45 9007.5 701.63 438.09 0 0 0 2576.7 1376.5 0 826.33 3088.3 0 0 703 82 689 6393;6394;6395;6396;6397;6398;6399;6400;6401;6402;6403;6404;6405;6406;6407 7187;7188;7189;7190;7191;7192;7193;7194;7195;7196;7197;7198;7199;7200;7201 7189 14 ELDTVTLEDIK Unmodified 1274.6606 0.66056277 280 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 65.605 67.61 2 0.009286 11363 Miao_Sh-c_Flag_mass3_141226_03 72.29 23.867 8362.3 0 1378.5 1352.2 791.02 749.84 795.87 0 3294.8 0 0 0 0 704 280 690 6408;6409;6410;6411;6412;6413 7202;7203;7204 7202 3 ELEAELEDERK Unmodified 1359.6518 0.65178899 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 2 3 3 50.117 49.847 2;3 2.136E-13 10818 Miao_Sh-H9_proteinG_mass3_141226_01 152.7 85.177 43343 221.77 460.2 0 330.2 174.2 908.71 0 0 829.76 11615 9046 19757 705 434 691 6414;6415;6416;6417;6418;6419;6420;6421;6422;6423;6424;6425;6426;6427 7205;7206;7207;7208;7209;7210 7208 5 ELEAVCQDVLSLLDNYLIK Unmodified 2234.1504 0.15043557 495 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 118.6 118.85 3 1.28E-06 28604 Miao_Sh-c_Flag_mass3_141226_01 71.872 65.055 9048 4749.5 3836.4 0 0 0 0 0 461.99 0 0 0 0 706 495 692 6428;6429;6430 7211 7211 1 ELEDATETADAMNR Unmodified 1564.6675 0.66751541 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 47.207 49.53 2 3.8543E-49 10607 Miao_Sh-c_proteinG_mass3_141226_03 177.36 145.32 0 0 0 0 0 0 0 0 0 0 0 0 0 707 433 693 6431;6432;6433 7212;7213;7214 7212 3 ELEDATETADAMNR Oxidation (M) 1580.6624 0.66243003 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 1 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 36.08 38.536 2 0.022027 7850 Miao_Sh-H9_proteinG_mass3_141226_03 54.898 51.036 0 0 0 0 0 0 0 0 0 0 0 0 0 708 433 693 6434 7215 7215 57 1 ELEEDFIK Unmodified 1021.4968 0.4967919 220 Q14019;H3BT58 COTL1 Coactosin-like protein yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 54.469 60.233 2 0.0048753 14819 Miao_Sh-c_proteinG_mass3_141226_03 94.806 27.774 0 0 0 0 0 0 0 0 0 0 0 0 0 709 220 694 6435 7216 7216 1 ELEEIVQPIISK Unmodified 1396.7813 0.7813466 355 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 4 5 3 3 2 3 5 4 3 4 3 72.832 72.126 2;3 3.8136E-136 14033 Miao_Sh-H9_Flag_mass3_141226_01 244.26 201.47 312280 7843.3 28388 31867 13612 15800 16748 57249 31178 40868 32655 24304 11765 710 355 695 6436;6437;6438;6439;6440;6441;6442;6443;6444;6445;6446;6447;6448;6449;6450;6451;6452;6453;6454;6455;6456;6457;6458;6459;6460;6461;6462;6463;6464;6465;6466;6467;6468;6469;6470;6471;6472;6473;6474;6475;6476;6477;6478 7217;7218;7219;7220;7221;7222;7223;7224;7225;7226;7227;7228;7229;7230;7231;7232;7233;7234;7235;7236;7237;7238;7239;7240;7241;7242;7243;7244;7245;7246;7247;7248;7249;7250;7251;7252;7253;7254;7255;7256;7257;7258;7259;7260;7261;7262;7263;7264;7265;7266;7267;7268;7269;7270;7271;7272;7273;7274;7275;7276;7277;7278;7279;7280;7281;7282;7283 7250 66 ELEELSLEAQGIK Unmodified 1457.7613 0.76133944 289 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 69.414 69.565 2 6.1511E-05 20120 Miao_Sh-H9_proteinG_mass3_141226_01 90.412 47.569 0 0 0 0 0 0 0 0 0 0 0 0 0 711 289 696 6479 7284 7284 1 ELEFYLR Unmodified 968.49673 0.49673232 499 P62241;Q5JR95 RPS8 40S ribosomal protein S8 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 3 2 7 1 100.98 90.629 2 1.9348E-10 32846 Miao_Sh-H9_proteinG_mass3_141226_02 139.27 81.021 28108 0 0 0 0 227.18 8420.3 0 0 0 6401.4 10323 2736.3 712 499 697 6480;6481;6482;6483;6484;6485;6486;6487;6488;6489;6490;6491;6492;6493 7285;7286;7287;7288;7289;7290;7291;7292;7293;7294;7295;7296;7297;7298;7299;7300;7301;7302;7303;7304;7305;7306;7307;7308 7302 24 ELELVYAR Unmodified 991.53385 0.53384611 573 Q14764 MVP Major vault protein yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 4 1 1 2 2 8 66.335 64.292 2 8.6791E-93 15336 Miao_Sh-H9_proteinG_mass3_141226_03 236.1 134.82 219070 0 0 0 9376.8 16367 60769 1478 1550.9 0 36847 47972 44710 713 573 698 6494;6495;6496;6497;6498;6499;6500;6501;6502;6503;6504;6505;6506;6507;6508;6509;6510;6511;6512;6513 7309;7310;7311;7312;7313;7314;7315;7316;7317;7318;7319;7320;7321;7322;7323;7324;7325;7326;7327;7328;7329;7330;7331 7324 23 ELEQLKTEEEELQR Unmodified 1772.8792 0.87922275 207 Q8NG31;H0YCZ2;Q8NG31-2 CASC5 Protein CASC5 yes no 0 0 0 0 1 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 1 60.826 62.482 3 0.0042157 16733 Miao_Sh-H9_proteinG_mass3_141226_02 62.528 36.254 49960 0 0 0 6312.2 5847.9 0 0 2029.8 0 15426 9352.3 10992 714 207 699 6514;6515;6516;6517;6518;6519;6520 7332;7333;7334;7335;7336 7335 5 ELESQISELQEDLESER Unmodified 2032.9437 0.9436735 433 P35579 MYH9 Myosin-9 yes yes 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 2 1 5 1 2 1 4 2 93.915 90.017 2;3 2.0016E-48 31978 Miao_Sh-H9_proteinG_mass3_141226_01 169.02 141.3 24042 0 1988 2153.9 921.64 471.1 0 0 0 2892.2 7812.7 7802.9 0 715 433 700 6521;6522;6523;6524;6525;6526;6527;6528;6529;6530;6531;6532;6533;6534;6535;6536;6537;6538 7337;7338;7339;7340;7341;7342;7343;7344;7345;7346;7347;7348;7349;7350;7351;7352;7353;7354;7355 7350 19 ELESQVSGLEK Unmodified 1217.6139 0.61394692 663 Q9P2E9;Q9P2E9-2;F8W7S5;Q9P2E9-3 RRBP1 Ribosome-binding protein 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 42.883 49.249 2 0.0076232 10544 Miao_Sh-c_proteinG_mass3_141226_03 69.815 17.224 0 0 0 0 0 0 0 0 0 0 0 0 0 716 663 701 6539 7356 7356 1 ELFVQSEIFPLETPAFAIK Unmodified 2178.1613 0.16125825 467 P49915 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 109.02 108.37 3 0.0010031 26102 Miao_Sh-H9_Flag_mass3_141226_01 52.731 41.089 0 0 0 0 0 0 0 0 0 0 0 0 0 717 467 702 6540 7357 7357 1 ELGITALHIK Unmodified 1093.6495 0.64954457 501 P62263;H0YB22;E5RH77 RPS14 40S ribosomal protein S14 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 1 2 74.116 71.108 2;3 0.011901 29676 Miao_Sh-H9_proteinG_mass3_141226_01 60.398 38.95 16365 601.04 0 1340.8 2280.3 2536 0 0 2465.4 2196.2 2035.7 1892.8 1016.4 718 501 703 6541;6542;6543;6544;6545;6546;6547;6548;6549;6550 7358;7359;7360;7361;7362;7363;7364 7363 7 ELGIWEPLAVK Unmodified 1253.702 0.70197407 43 P49368;B4DUR8;P49368-2 CCT3 T-complex protein 1 subunit gamma yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 2 1 1 2 87.587 87.373 2 0.002441 18383 Miao_Sh-H9_Flag_mass3_141226_01 95.618 56.579 9910.3 0 2459.1 0 0 0 0 3808.5 3416.1 226.53 0 0 0 719 43 704 6551;6552;6553;6554;6555;6556;6557;6558 7365;7366;7367;7368;7369;7370;7371 7368 7 ELGLGLGLGLK Unmodified 1068.6543 0.6542956 249 Q9BTD8;K7ER08;K7EQ03;K7EP90;Q9BTD8-4;Q9BTD8-2;Q9BTD8-3 RBM42 RNA-binding protein 42 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 83.906 83.906 2 0.045073 17968 Miao_Sh-H9_Flag_mass3_141226_02 46.64 21.746 0 0 0 0 0 0 0 0 0 0 0 0 0 720 249 705 6559 7372 7372 1 ELGLPEELVSR Unmodified 1240.6663 0.66631685 467 P49915;P49915-2 GMPS GMP synthase [glutamine-hydrolyzing] yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 73.86 71.885 2 0.0076414 21633 Miao_Sh-H9_proteinG_mass3_141226_01 69.786 34.348 4620.1 1172.6 874.61 507.56 0 0 698.96 0 0 0 0 0 1366.4 721 467 706 6560;6561;6562;6563;6564;6565 7373;7374;7375 7373 3 ELGVGIALR Unmodified 926.55492 0.5549159 538 Q01469 FABP5 Fatty acid-binding protein, epidermal yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 1 61.949 62.591 2 0.00020343 15955 Miao_Sh-c_proteinG_mass3_141226_03 111.82 63.972 10399 516.52 274.65 0 0 0 0 1243.3 0 0 4613 0 3751.2 722 538 707 6566;6567;6568;6569;6570;6571;6572;6573 7376;7377;7378;7379;7380 7377 5 ELIDTILVK Unmodified 1042.6274 0.62741214 150;562 Q13490;E9PMH5;Q13490-2;E9PIW1;E9PI77;Q13489 BIRC2;BIRC3 Baculoviral IAP repeat-containing protein 2;Baculoviral IAP repeat-containing protein 3 no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 2 1 1 1 1 74.425 74.65 2 0.0064311 15193 Miao_Sh-H9_Flag_mass3_141226_02 82.645 17.888 22574 2889.7 3239.5 3923.1 0 0 0 3860.8 4335.7 4010.9 314.4 0 0 723 150;562 708 6574;6575;6576;6577;6578;6579;6580;6581 7381;7382;7383;7384;7385;7386;7387;7388 7387 8 ELIIGDR Unmodified 814.45487 0.45486751 410 P25705;P25705-2;P25705-3;K7EK77;K7ENJ4 ATP5A1 ATP synthase subunit alpha, mitochondrial yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 47.77 48.221 2 0.047599 5198 Miao_Sh-c_Flag_mass3_141226_02 66.993 17.403 0 0 0 0 0 0 0 0 0 0 0 0 0 724 410 709 6582 7389 7389 1 ELISNASDALDK Unmodified 1274.6354 0.63541065 344;369 P08238;Q5T9W8;F8W026;P14625 HSP90AB1;HSP90B1 Heat shock protein HSP 90-beta;Endoplasmin no no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 1 1 1 1 52.577 54.588 2 9.7617E-42 14253 Miao_Sh-H9_proteinG_mass3_141226_01 180.09 97.801 54190 2728.5 1829.1 0 1304.6 1233.5 837.06 0 0 6975.8 17522 10848 10911 725 344;369 710 6583;6584;6585;6586;6587;6588;6589;6590;6591;6592;6593 7390;7391;7392;7393;7394;7395;7396;7397;7398;7399;7400;7401 7398 12 ELISNSSDALDK Unmodified 1290.6303 0.63032527 341 P07900;P07900-2;Q14568;G3V2J8 HSP90AA1;HSP90AA2 Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A2 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 2 1 1 1 1 2 1 2 1 2 1 45.758 47.09 2 6.9307E-07 11355 Miao_Sh-H9_proteinG_mass3_141226_02 125.82 54.126 11378 43.784 605.23 574.08 347.12 590.05 399.04 1098 823.62 952.3 5240.1 282.75 422.29 726 341 711 6594;6595;6596;6597;6598;6599;6600;6601;6602;6603;6604;6605;6606;6607;6608;6609;6610 7402;7403;7404;7405;7406;7407;7408;7409;7410 7410 9 ELLELEALSMAVESTGTAK Unmodified 1991.0133 0.013273388 573 Q14764 MVP Major vault protein yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 2 1 1 111.46 103.69 3 2.2258E-08 26158 Miao_Sh-c_proteinG_mass3_141226_01 80.541 55.623 14625 0 0 0 5025.5 3838.1 842.38 0 0 0 563.14 705.1 3650.3 727 573 712 6611;6612;6613;6614;6615;6616;6617 7411;7412;7413 7411 3 ELLELEALSMAVESTGTAK Oxidation (M) 2007.0082 0.0081880099 573 Q14764 MVP Major vault protein yes yes 0 0 1 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 1 2 114.08 99.611 3 2.4418E-08 36521 Miao_Sh-H9_proteinG_mass3_141226_02 79.489 61.785 0 0 0 0 0 0 0 0 0 0 0 0 0 728 573 712 6618;6619;6620 7414;7415;7416 7414 73 3 ELLEQISAFDNVPR Unmodified 1629.8362 0.83623572 654 Q9NX58 LYAR Cell growth-regulating nucleolar protein yes yes 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching 1 1 1 3 1 1 1 1 4 90.536 88.035 2;3 2.5638E-05 32673 Miao_Sh-H9_proteinG_mass3_141226_02 101.53 62.745 13074 565.99 1216.3 0 4716.3 492.96 0 0 1712 0 1354.7 3015.6 0 729 654 713 6621;6622;6623;6624;6625;6626;6627;6628;6629;6630;6631;6632;6633;6634 7417;7418;7419;7420;7421;7422;7423;7424 7423 8 ELLLQPVTISR Unmodified 1267.75 0.7499869 185 P59998;F8WCF6;F8WDD7;P59998-3;P59998-2;H7C0A3 ARPC4;ARPC4-TTLL3 Actin-related protein 2/3 complex subunit 4 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 73.22 74.975 2 0.0010736 20891 Miao_Sh-H9_proteinG_mass3_141226_02 115.65 45.391 35285 9522.4 0 0 0 242.27 0 0 0 0 22462 3058.7 0 730 185 714 6635;6636;6637;6638;6639;6640 7425;7426;7427;7428;7429;7430 7429 6 ELLLTGPGLEER Unmodified 1325.7191 0.7190807 610 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 2 1 64.81 69.438 2 0.0011078 19167 Miao_Sh-H9_proteinG_mass3_141226_03 79.492 43.067 0 0 0 0 0 0 0 0 0 0 0 0 0 731 610 715 6641;6642;6643 7431;7432;7433 7433 3 ELLTEFGYK Unmodified 1098.5597 0.55972651 465 P49411 TUFM Elongation factor Tu, mitochondrial yes yes 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 1 70.253 71.055 2 0.013781 13450 Miao_Sh-H9_Flag_mass3_141226_02 74.92 27.071 12441 3762.4 0 0 0 0 0 0 7075.3 0 0 1603.8 0 732 465 716 6644;6645;6646;6647;6648 7434;7435;7436 7435 3 ELLTLDEK Unmodified 959.51753 0.51752734 459 P46781;B5MCT8;C9JM19;F2Z3C0;A8MXK4 RPS9 40S ribosomal protein S9 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 53.13 55.603 2 0.00060798 12900 Miao_Sh-c_proteinG_mass3_141226_03 131.22 23.928 58347 0 0 0 1976.5 1425.2 14347 2318 0 0 25070 0 13210 733 459 717 6649;6650;6651;6652;6653;6654 7437;7438;7439;7440;7441;7442 7437 6 ELLTSFGPLK Unmodified 1103.6227 0.62266112 413 P26368;P26368-2;K7ENG2 U2AF2 Splicing factor U2AF 65 kDa subunit yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 73.709 68.93 2 0.0025822 21870 Miao_Sh-H9_proteinG_mass3_141226_03 96.143 26.545 15024 0 0 270.91 4408.6 0 795.22 3233.4 555.84 0 0 0 5760 734 413 718 6655;6656;6657;6658;6659;6660 7443;7444;7445 7444 3 ELLTTMGDR Unmodified 1034.5066 0.50664508 240 O14950;P19105;J3QRS3;P24844;P24844-2 MYL12B;MYL12A;MYL9 Myosin regulatory light chain 12B;Myosin regulatory light chain 12A;Myosin regulatory light polypeptide 9 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 1 1 2 1 1 2 2 2 2 48.764 50.544 2 8.898E-30 7257 Miao_Sh-H9_Flag_mass3_141226_03 186.67 109.39 83739 3153.2 4107.6 5052.4 3030.9 2793.6 2310.6 1167.4 7834 11956 19421 11620 11291 735 240 719 6661;6662;6663;6664;6665;6666;6667;6668;6669;6670;6671;6672;6673;6674;6675;6676;6677;6678;6679 7446;7447;7448;7449;7450;7451;7452;7453;7454;7455;7456;7457;7458;7459;7460 7454 15 ELLTTMGDR Oxidation (M) 1050.5016 0.5015597 240 O14950;P19105;J3QRS3;P24844;P24844-2 MYL12B;MYL12A;MYL9 Myosin regulatory light chain 12B;Myosin regulatory light chain 12A;Myosin regulatory light polypeptide 9 yes no 0 0 1 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 1 1 1 1 1 37.634 39.024 2 0.001697 3679 Miao_Sh-c_Flag_mass3_141226_03 98.055 64.412 14779 733.77 802.76 865.82 641.76 80.912 4947.7 1106.5 1265.4 17.338 0 558.29 3758.6 736 240 719 6680;6681;6682;6683;6684;6685;6686;6687;6688;6689;6690 7461;7462;7463;7464;7465;7466;7467;7468;7469 7463 32 9 ELLTTMGDRFTDEEVDELYR Unmodified 2431.1213 0.12132029 240 O14950;P19105;J3QRS3 MYL12B;MYL12A Myosin regulatory light chain 12B;Myosin regulatory light chain 12A yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 110.86 98.683 3 8.1475E-10 35486 Miao_Sh-H9_proteinG_mass3_141226_01 85.937 74.045 0 0 0 0 0 0 0 0 0 0 0 0 0 737 240 720 6691 7470 7470 1 ELLYGGTSPTAETILK Unmodified 1691.8982 0.89816728 305 O95793;Q5JW30;O95793-2;O95793-3 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 69.968 65.807 2 1.2359E-05 20225 Miao_Sh-c_proteinG_mass3_141226_03 81.656 48.657 0 0 0 0 0 0 0 0 0 0 0 0 0 738 305 721 6692 7471 7471 1 ELNITAAK Unmodified 858.48108 0.48108226 496 P62081;B5MCP9 RPS7 40S ribosomal protein S7 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1 39.295 41.312 2 0.012496 9385 Miao_Sh-H9_proteinG_mass3_141226_01 87.639 30.537 19387 696.05 0 581.74 815.28 625.73 3791.1 0 0 639.76 4523.8 3745.2 3968.4 739 496 722 6693;6694;6695;6696;6697;6698;6699;6700;6701 7472;7473;7474;7475;7476;7477;7478 7476 7 ELNYFAK Unmodified 883.44397 0.44396847 63 P00558;B7Z7A9 PGK1 Phosphoglycerate kinase 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 49.743 52.015 2 0.045832 11530 Miao_Sh-c_proteinG_mass3_141226_03 73.039 29.231 6245.4 404.83 0 0 0 0 2904.3 0 0 0 2936.2 0 0 740 63 723 6702;6703;6704 7479 7479 1 ELPPGVEELLNK Unmodified 1336.7238 0.72383172 573 Q14764 MVP Major vault protein yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 2 2 6 1 1 4 5 7 98.191 91.565 2;3 7.9294E-07 17717 Miao_Sh-c_proteinG_mass3_141226_02 133.42 85.714 362330 0 0 0 65554 49907 40824 986.71 501.77 0 95864 77049 31640 741 573 724 6705;6706;6707;6708;6709;6710;6711;6712;6713;6714;6715;6716;6717;6718;6719;6720;6721;6722;6723;6724;6725;6726;6727;6728;6729;6730;6731;6732 7480;7481;7482;7483;7484;7485;7486;7487;7488;7489;7490;7491;7492;7493;7494;7495;7496;7497;7498;7499;7500;7501;7502;7503;7504;7505;7506;7507;7508;7509;7510;7511;7512;7513;7514;7515;7516;7517;7518;7519;7520;7521;7522;7523;7524;7525;7526;7527;7528;7529;7530;7531;7532;7533;7534;7535;7536 7487 57 ELQAQIAELQEDFESEK Unmodified 2005.948 0.94803059 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 9 1 1 2 2 5 1 2 102.74 94.345 2;3 2.723E-38 33790 Miao_Sh-H9_proteinG_mass3_141226_01 159.04 139.76 40041 0 6751.5 1020.6 0 0 6368.8 477.35 0 0 11591 3486.5 10345 742 434 725 6733;6734;6735;6736;6737;6738;6739;6740;6741;6742;6743;6744;6745;6746;6747;6748;6749;6750;6751;6752;6753;6754;6755;6756;6757;6758 7537;7538;7539;7540;7541;7542;7543;7544;7545;7546;7547;7548;7549;7550;7551;7552;7553;7554;7555;7556;7557;7558;7559;7560;7561;7562;7563;7564;7565;7566;7567;7568 7565 32 ELQELVQYPVEHPDK Unmodified 1822.9101 0.91012895 483 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 3 2 1 1 4 3 3 61.999 62.437 2;3 1.9639E-94 10274 Miao_Sh-H9_Flag_mass3_141226_01 218.2 183.15 91334 13015 10410 8270.9 2694.3 0 0 17133 19730 17456 0 2623.8 0 743 483 726 6759;6760;6761;6762;6763;6764;6765;6766;6767;6768;6769;6770;6771;6772;6773;6774;6775;6776 7569;7570;7571;7572;7573;7574;7575;7576;7577;7578;7579;7580;7581;7582;7583;7584;7585;7586;7587;7588;7589 7578 21 ELSEALGQIFDSQR Unmodified 1591.7842 0.78420015 549 Q08380;K7EJY8;K7ESM3;K7EKQ5;K7EP36 LGALS3BP Galectin-3-binding protein yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 88.191 84.407 2;3 0.0052629 32403 Miao_Sh-H9_proteinG_mass3_141226_01 59.709 43.571 2345.4 0 0 0 1278.9 0 0 0 0 0 0 1066.5 0 744 549 727 6777;6778;6779 7590;7591 7591 2 ELSILQTIMTSLR Unmodified 1503.8331 0.8330646 689 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 2 2 2 115.45 115.93 2;3 0.0025328 27445 Miao_Sh-c_Flag_mass3_141226_03 72.29 23.723 42968 0 0 32145 0 0 0 0 0 10823 0 0 0 + 745 689 728 6780;6781;6782;6783;6784;6785 7592;7593;7594;7595 7594 4 ELSLAGNELGDEGAR Unmodified 1529.7322 0.73216458 365 P13489;H0YCR7 RNH1 Ribonuclease inhibitor yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 59.809 60.26 2 2.8888E-08 16404 Miao_Sh-H9_proteinG_mass3_141226_01 98.676 60.109 0 0 0 0 0 0 0 0 0 0 0 0 0 746 365 729 6786 7596 7596 1 ELSTTLNADEAVTR Unmodified 1518.7526 0.75256567 431 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 54.93 55.581 2 0.0061143 14503 Miao_Sh-H9_proteinG_mass3_141226_01 57.788 28.831 0 0 0 0 0 0 0 0 0 0 0 0 0 747 431 730 6787 7597 7597 1 ELTAVVQK Unmodified 886.51238 0.51238239 402 P23396;F2Z2S8;H0YCJ7;E9PPU1;E9PL09;P23396-2;H0YF32;E9PQ96;E9PJH4;E9PK82 RPS3 40S ribosomal protein S3 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 39.043 38.19 2 0.032288 4089 Miao_Sh-H9_Flag_mass3_141226_01 65.313 36.002 0 0 0 0 0 0 0 0 0 0 0 0 0 748 402 731 6788 7598 7598 1 ELTTEIDNNIEQISSYK Unmodified 1995.9637 0.96368066 104 P13645;CON__P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 2 6 16 7 7 88.205 82.26 2;3 2.2267E-145 29671 Miao_Sh-H9_proteinG_mass3_141226_02 228.2 198.85 71046 2850.7 0 0 7651.6 500.75 8084.7 11817 4342 8921.1 13290 9778.3 3809.9 + 749 104 732 6789;6790;6791;6792;6793;6794;6795;6796;6797;6798;6799;6800;6801;6802;6803;6804;6805;6806;6807;6808;6809;6810;6811;6812;6813;6814;6815;6816;6817;6818;6819;6820;6821;6822;6823;6824;6825;6826;6827;6828;6829;6830;6831;6832 7599;7600;7601;7602;7603;7604;7605;7606;7607;7608;7609;7610;7611;7612;7613;7614;7615;7616;7617;7618;7619;7620;7621;7622;7623;7624;7625;7626;7627;7628;7629;7630;7631;7632;7633;7634;7635;7636;7637;7638;7639;7640;7641;7642;7643;7644;7645;7646;7647;7648;7649;7650;7651 7643 52 ELTVSNNDINEAGVR Unmodified 1629.7958 0.79582747 365 P13489;E9PMJ3;E9PLZ3;E9PIM9 RNH1 Ribonuclease inhibitor yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 51.974 54.481 2 0.0034345 13605 Miao_Sh-H9_proteinG_mass3_141226_02 59.634 31.667 0 0 0 0 0 0 0 0 0 0 0 0 0 750 365 733 6833 7652 7652 1 ELVVTQLGYDTR Unmodified 1392.7249 0.72489436 539 Q01813;Q01813-2;V9GY25;B1APP6 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 65.457 66.861 2 0.038267 10834 Miao_Sh-c_Flag_mass3_141226_02 46.069 23.428 0 0 0 0 0 0 0 0 0 0 0 0 0 751 539 734 6834;6835 7653;7654 7653 2 ELVYPPDYNPEGK Unmodified 1519.7195 0.71947463 363 P12956;B1AHC8;B1AHC9;F5H1I8 XRCC6 X-ray repair cross-complementing protein 6 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 56.722 59.579 2 0.053519 15144 Miao_Sh-H9_proteinG_mass3_141226_03 41.996 27.179 0 0 0 0 0 0 0 0 0 0 0 0 0 752 363 735 6836 7655 7655 1 ENAGEDPGLAR Unmodified 1127.5207 0.52071524 534 P81605;P81605-2 DCD Dermcidin;Survival-promoting peptide;DCD-1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 33.038 34.191 2 0.0033647 3319 Miao_Sh-c_proteinG_mass3_141226_01 75.088 30.739 0 0 0 0 0 0 0 0 0 0 0 0 0 753 534 736 6837 7656 7656 1 ENAPAIIFIDEIDAIATK Unmodified 1943.0252 0.025158703 453 P43686;P43686-2 PSMC4 26S protease regulatory subunit 6B yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 2 3 1 3 1 1 1 1 118.95 117.36 2;3 1.1776E-14 27468 Miao_Sh-c_Flag_mass3_141226_01 108.6 61.807 22600 0 4302.8 3108.6 1464.8 0 27.701 7836.2 5860.2 0 0 0 0 754 453 737 6838;6839;6840;6841;6842;6843;6844;6845;6846;6847;6848;6849;6850 7657;7658;7659;7660;7661;7662;7663;7664;7665;7666;7667;7668;7669 7658 13 ENDAHLVEVNLNNIK Unmodified 1720.8744 0.87441214 657 Q9NYL9;H0YKU1;H0YNJ8 TMOD3 Tropomodulin-3 yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 2 1 2 1 64.738 66.342 2;3 7.3177E-17 18645 Miao_Sh-H9_proteinG_mass3_141226_01 148.7 123.56 43417 0 1394.9 1385.3 5715.2 2558.3 3238 0 820.91 2494 20930 4880 0 755 657 738 6851;6852;6853;6854;6855;6856;6857;6858;6859;6860;6861;6862 7670;7671;7672;7673;7674;7675;7676;7677 7675 8 ENFIPTIVNFSAEEISDAIR Unmodified 2264.1325 0.13247732 568 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 114.82 115.47 3 0.034179 30568 Miao_Sh-c_proteinG_mass3_141226_01 35.091 24.11 0 0 0 0 0 0 0 0 0 0 0 0 0 756 568 739 6863 7678 7678 1 ENFPNFLSACDK Unmodified 1440.6344 0.63436479 425 P31151;Q86SG5 S100A7;S100A7A Protein S100-A7;Protein S100-A7A yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 2 1 79.593 77.423 2 0.00048172 14973 Miao_Sh-c_proteinG_mass3_141226_01 107.99 13.306 22780 2333 0 1151.6 6703.4 7700.8 0 0 1103.9 0 1196.9 2590.1 0 757 425 740 6864;6865;6866;6867;6868;6869;6870;6871 7679;7680;7681;7682;7683 7679 5 ENILEEFSK Unmodified 1107.5448 0.54480473 281 O43390;O43390-2;O43390-4;O43390-3;B4DT28;E7ETM7 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 1 1 2 1 1 2 1 1 64.568 62.968 2 0.0020699 20756 Miao_Sh-c_proteinG_mass3_141226_03 99.283 54.965 23819 0 354.99 660.89 3197.2 2818.9 5163.9 1792.5 2502.4 0 4939 0 2388.8 758 281 741 6872;6873;6874;6875;6876;6877;6878;6879;6880;6881;6882;6883;6884 7684;7685;7686;7687;7688;7689;7690;7691 7687 8 ENIVEAIIHSPELIR Unmodified 1731.9519 0.95193418 302 O95373;E9PLB2 IPO7 Importin-7 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 97.096 101.06 3 0.0081464 24324 Miao_Sh-c_proteinG_mass3_141226_02 49.595 30.97 1687.5 0 0 0 0 1687.5 0 0 0 0 0 0 0 759 302 742 6885 7692 7692 1 ENLSYDLVPLK Unmodified 1289.6867 0.68671794 625 Q92598;Q92598-2;Q92598-3;Q92598-4;R4GN69 HSPH1 Heat shock protein 105 kDa yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 73.012 74.416 2 0.0031069 15071 Miao_Sh-H9_Flag_mass3_141226_03 80.17 55.317 2098.8 0 0 2098.8 0 0 0 0 0 0 0 0 0 760 625 743 6886;6887;6888;6889 7693;7694;7695;7696;7697 7697 5 ENSLITQFTSFVAVEK Unmodified 1811.9305 0.93053004 664 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 3 1 112.93 104.6 2;3 0.00081084 25408 Miao_Sh-c_proteinG_mass3_141226_01 61.495 48.689 6856 0 0 0 2156.2 0 1272 0 0 0 1422.8 2005 0 761 664 744 6890;6891;6892;6893;6894;6895 7698;7699;7700;7701 7699 4 ENVNLAQIR Unmodified 1055.5724 0.57235688 15 P48444;B0YIW6;P48444-2 ARCN1 Coatomer subunit delta yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 51.131 51.883 2 0.019268 13084 Miao_Sh-H9_proteinG_mass3_141226_01 70.256 27.387 0 0 0 0 0 0 0 0 0 0 0 0 0 762 15 745 6896 7702 7702 1 EPACDDPDTEQAALAAVDYINK Unmodified 2405.0693 0.069284717 103 CON__P12763 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching 2 1 1 1 1 1 1 1 84.152 84.603 3 1.3117E-08 17392 Miao_Sh-H9_Flag_mass3_141226_01 68.199 62.389 5062.8 2371.6 0 0 1946.6 0 0 0 744.59 0 0 0 0 + 763 103 746 6897;6898;6899;6900;6901;6902;6903;6904;6905 7703;7704;7705;7706;7707;7708;7709 7708 7 EPEAAGPVGTEPTVETLEPLGVLFPSTTK Unmodified 2965.5172 0.51719958 276 O15446;O15446-2 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 114.11 96.913 3 7.0075E-05 36396 Miao_Sh-H9_proteinG_mass3_141226_03 37.808 34.686 0 0 0 0 0 0 0 0 0 0 0 0 0 764 276 747 6906 7710 7710 1 EPFTIAQGK Unmodified 989.5182 0.51819605 436 P35659;D6RDA2;D6R9L5 DEK Protein DEK yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 41.182 47.548 2 0.035215 10136 Miao_Sh-c_proteinG_mass3_141226_03 60.892 36.92 0 0 0 0 0 0 0 0 0 0 0 0 0 765 436 748 6907 7711 7711 1 EPLLTLVK Unmodified 911.56917 0.56916898 559 Q13200;E9PCS3;E7EW34 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 68.097 68.047 2 0.024221 12629 Miao_Sh-H9_Flag_mass3_141226_03 71.379 1.5548 0 0 0 0 0 0 0 0 0 0 0 0 0 766 559 749 6908 7712 7712 1 EPPLSLTIHLTSPVVR Unmodified 1758.004 0.003969751 553 Q12906;Q12906-4;Q12906-5;Q12906-2;Q12906-6;Q12906-3;Q12906-7;K7EKJ9;K7EQR9;K7EKY0;K7EPG3 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 2 1 3 112.5 97.868 3 1.4601E-05 36227 Miao_Sh-H9_proteinG_mass3_141226_03 78.326 66.595 0 0 0 0 0 0 0 0 0 0 0 0 0 767 553 750 6909;6910;6911;6912;6913;6914 7713;7714;7715;7716;7717;7718 7716 6 EPQVYVLAPPQEELSK Unmodified 1825.9462 0.9461801 92;93 CON__ENSEMBL:ENSBTAP00000024462;CON__ENSEMBL:ENSBTAP00000024466 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 5 2 75.168 72.404 2;3 2.1479E-10 20937 Miao_Sh-H9_proteinG_mass3_141226_01 124.91 105.78 135980 0 0 0 0 0 36112 0 0 0 47412 23209 29252 + 768 92;93 751 6915;6916;6917;6918;6919;6920;6921;6922;6923;6924 7719;7720;7721;7722;7723;7724;7725;7726;7727;7728;7729;7730;7731;7732 7722 14 EPQVYVLDPPK Unmodified 1283.6762 0.67615325 92 CON__ENSEMBL:ENSBTAP00000024462 yes yes 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 1 2 1 2 2 56.886 59.693 2 0.0063925 14963 Miao_Sh-c_proteinG_mass3_141226_03 79.283 61.464 14008 0 0 0 2515.4 1090.9 7271.5 0 0 0 397.81 2732.8 0 + 769 92 752 6925;6926;6927;6928;6929;6930;6931;6932 7733;7734;7735;7736 7734 4 EPQVYVLDPPKEELSK Unmodified 1869.9724 0.97239485 92 CON__ENSEMBL:ENSBTAP00000024462 yes yes 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 61.93 63.484 3 0.013168 16827 Miao_Sh-H9_proteinG_mass3_141226_03 50.158 39.706 4600.8 0 0 0 0 0 0 0 0 0 2377.9 0 2222.9 + 770 92 753 6933;6934 7737;7738 7738 2 EPSEVPTPK Unmodified 982.49713 0.49712625 384;383 P17096-2;P17096;H7BYM6;P17096-3 HMGA1 High mobility group protein HMG-I/HMG-Y no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching 2 1 2 2 1 2 1 2 33.743 34.387 2 0.0051875 7509 Miao_Sh-H9_proteinG_mass3_141226_01 85.716 61.923 8160.3 515.25 622.56 568.21 442.73 116.97 0 0 643.39 633.75 4617.4 0 0 771 384;383 754 6935;6936;6937;6938;6939;6940;6941;6942;6943;6944;6945;6946;6947 7739;7740;7741;7742;7743;7744;7745;7746;7747;7748 7747 10 EPTPVLGSGAAAAGR Unmodified 1352.7048 0.70482762 196 P42167;P42167-2;G5E972;P42166;A2T926 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 44.679 47.9 2 0.0065777 5734 Miao_Sh-H9_Flag_mass3_141226_03 58.079 45.448 2959.8 0 0 0 0 552.5 1252.7 0 0 732.05 0 422.5 0 772 196 755 6948;6949;6950;6951 7749 7749 1 EQADFALEALAK Unmodified 1304.6612 0.66123147 158 Q7Z406;F2Z2U8;G8JLL9;Q7Z406-6;Q7Z406-2;Q7Z406-5;Q7Z406-4;M0QY43 MYH14 Myosin-14 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 2 2 3 6 1 3 4 7 8 8 79.135 74.47 2;3 7.0185E-24 19445 Miao_Sh-c_proteinG_mass3_141226_03 169.52 119.07 260570 304.79 6412.7 5083.4 20802 714.84 50049 13660 10234 18673 55397 51727 27514 773 158 756 6952;6953;6954;6955;6956;6957;6958;6959;6960;6961;6962;6963;6964;6965;6966;6967;6968;6969;6970;6971;6972;6973;6974;6975;6976;6977;6978;6979;6980;6981;6982;6983;6984;6985;6986;6987;6988;6989;6990;6991;6992;6993;6994;6995;6996;6997;6998;6999;7000;7001 7750;7751;7752;7753;7754;7755;7756;7757;7758;7759;7760;7761;7762;7763;7764;7765;7766;7767;7768;7769;7770;7771;7772;7773;7774;7775;7776;7777;7778;7779;7780;7781;7782;7783;7784;7785;7786;7787;7788;7789;7790;7791;7792;7793;7794;7795;7796;7797;7798;7799 7760 49 EQADFAVEALAK Unmodified 1290.6456 0.6455814 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 no no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 3 2 3 2 1 4 2 2 70.944 69.738 2;3 0.00045934 18072 Miao_Sh-H9_proteinG_mass3_141226_03 104.41 68.169 70796 0 1060 706.27 6087.8 0 15862 6178.1 4293.9 0 16975 10789 8844.3 774 434 757 7002;7003;7004;7005;7006;7007;7008;7009;7010;7011;7012;7013;7014;7015;7016;7017;7018;7019;7020;7021;7022 7800;7801;7802;7803;7804;7805;7806;7807;7808;7809;7810;7811;7812;7813;7814 7814 15 EQAEAEVASLNR Unmodified 1315.6368 0.63680763 335 P06753-2;Q5VU59;P06753-5;P06753-3;P06753-4;P06753-6;D6R904 TPM3 Tropomyosin alpha-3 chain yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 2 2 2 1 1 45.436 48.377 2 7.3125E-26 10087 Miao_Sh-c_proteinG_mass3_141226_03 162.93 19.379 4888.8 0 0 0 0 0 4061.4 0 0 198.29 0 629.16 0 775 335 758 7023;7024;7025;7026;7027;7028;7029;7030;7031 7815;7816;7817;7818;7819;7820;7821 7817 7 EQEVNILK Unmodified 971.52876 0.52876073 433 P35579 MYH9 Myosin-9 yes yes 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 2 1 1 44.983 47.214 2 0.00019164 11474 Miao_Sh-H9_proteinG_mass3_141226_01 116.25 33.972 134280 1304.8 0 1087.3 1540.9 1352.8 37997 0 1655.2 0 0 47638 41703 776 433 759 7032;7033;7034;7035;7036;7037;7038;7039;7040;7041 7822;7823;7824;7825;7826;7827;7828 7825 7 EQGNIYKPNNK Unmodified 1303.6521 0.65206377 543 Q03135 CAV1 Caveolin-1 yes yes 0 0 0 0 1 By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 2 29.01 28.968 3 0.0038209 2794 Miao_Sh-H9_Flag_mass3_141226_03 74.533 43.847 1464.5 310.38 259.82 41.617 0 0 0 287.16 319.48 246.03 0 0 0 777 543 760 7042;7043;7044;7045;7046;7047;7048 7829;7830;7831;7832 7832 4 EQGVLSFWR Unmodified 1120.5665 0.56654322 322;361 P12236;I7HJJ0;P05141 SLC25A6;SLC25A5 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 2 1 1 1 80.767 81.9 2 6.3606E-10 15551 Miao_Sh-c_Flag_mass3_141226_02 151.22 97.343 26423 5233.8 4025.9 4908 0 4717.6 0 7537.6 0 0 0 0 0 778 361;322 761 7049;7050;7051;7052;7053;7054;7055;7056 7833;7834;7835;7836;7837;7838;7839;7840;7841;7842;7843 7834 11 EQGVTFPSGDIQEQLIR Unmodified 1915.964 0.96395543 464 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 78.913 79.013 2 0.012749 16711 Miao_Sh-H9_Flag_mass3_141226_03 45.138 36.341 0 0 0 0 0 0 0 0 0 0 0 0 0 779 464 762 7057;7058 7844;7845 7845 2 EQILEEFSK Unmodified 1121.5605 0.56045479 286 O60506-4;O60506-3;O60506;O60506-2;O60506-5 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 3 63.856 63.731 2 0.0019685 17205 Miao_Sh-H9_proteinG_mass3_141226_03 96.342 19.663 16496 0 0 225.37 2162.4 0 0 1011.3 0 816.24 5630.8 286.82 6363 780 286 763 7059;7060;7061;7062;7063;7064;7065;7066;7067 7846;7847;7848;7849 7849 4 EQISDIDDAVR Unmodified 1259.5994 0.59935949 479 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 52.213 53.927 2 3.2598E-25 13318 Miao_Sh-H9_proteinG_mass3_141226_02 107.17 54.684 22243 0 823.02 0 0 0 7291.2 0 1154.7 0 7896.9 5077.6 0 781 479 764 7068;7069;7070;7071;7072;7073;7074 7850;7851;7852;7853;7854;7855;7856 7855 6 EQIVPKPEEEVAQK Unmodified 1622.8516 0.85155143 231 P18621;J3QQT2;J3KRX5;P18621-3;J3QLC8;P18621-2 RPL17 60S ribosomal protein L17 yes no 0 0 0 0 1 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 2 2 3 2 2 42.565 44.74 2;3 3.4177E-06 10357 Miao_Sh-H9_proteinG_mass3_141226_02 119.88 93.835 83887 0 160.91 0 2025.1 3044.9 22818 0 61.033 0 21794 15271 18713 782 231 765 7075;7076;7077;7078;7079;7080;7081;7082;7083;7084;7085;7086;7087;7088;7089 7857;7858;7859;7860;7861;7862;7863;7864;7865;7866;7867;7868;7869;7870;7871;7872;7873;7874;7875;7876;7877;7878;7879;7880;7881;7882;7883;7884;7885 7875 29 EQLAIAEFAR Unmodified 1146.6033 0.60332266 386 P17987;F5H282;E7EQR6 TCP1 T-complex protein 1 subunit alpha yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 2 1 1 2 1 68.042 70.08 2 0.0002127 18459 Miao_Sh-c_proteinG_mass3_141226_03 120.06 54.837 13043 0 0 353.68 0 0 2916.7 1021 0 0 3150.1 3179.9 2421.5 783 386 766 7090;7091;7092;7093;7094;7095;7096;7097;7098;7099 7886;7887;7888;7889;7890;7891;7892 7889 7 EQLEEEEEAK Unmodified 1232.5408 0.54084156 433 P35579 MYH9 Myosin-9 yes yes 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1 1 1 32.617 34.146 2 0.0001921 6985 Miao_Sh-H9_proteinG_mass3_141226_01 126.71 89.116 14551 0 530.58 425.19 681.62 734.8 3565 0 486.85 557.23 3010 2283.8 2275.7 784 433 767 7100;7101;7102;7103;7104;7105;7106;7107;7108;7109;7110 7893;7894;7895;7896;7897;7898;7899;7900;7901;7902;7903;7904;7905;7906 7904 14 EQQIVIQSSGGLSK Unmodified 1472.7835 0.78347187 441 P38646;H0Y8S0 HSPA9 Stress-70 protein, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 2 4 3 1 1 4 3 15 52.918 54.234 2;3 8.2214E-191 12516 Miao_Sh-H9_proteinG_mass3_141226_01 263.21 209.64 345470 0 743.33 0 7164.6 6670.7 26869 0 1811.6 0 170730 9329.8 122150 785 441 768 7111;7112;7113;7114;7115;7116;7117;7118;7119;7120;7121;7122;7123;7124;7125;7126;7127;7128;7129;7130;7131;7132;7133;7134;7135;7136;7137;7138;7139;7140;7141;7142;7143;7144;7145 7907;7908;7909;7910;7911;7912;7913;7914;7915;7916;7917;7918;7919;7920;7921;7922;7923;7924;7925;7926;7927;7928;7929;7930;7931;7932;7933;7934;7935;7936;7937;7938;7939;7940;7941;7942;7943;7944;7945 7923 39 EQVANSAFVER Unmodified 1248.6099 0.6098646 344 P08238;Q58FF7 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS 1 2 1 1 1 1 1 2 1 1 2 42.784 44.807 2 0.00013368 10055 Miao_Sh-H9_proteinG_mass3_141226_03 127.78 63.512 14246 690.48 83.584 129.98 93.275 186.55 1393.1 908.53 0 0 454.26 1759.8 8546.3 786 344 769 7146;7147;7148;7149;7150;7151;7152;7153;7154;7155;7156;7157;7158;7159 7946;7947;7948;7949;7950;7951 7951 6 EQVEPTPEDEDDDIELR Unmodified 2027.8807 0.88073889 602 Q86TG7;Q86TG7-2 PEG10 Retrotransposon-derived protein PEG10 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 60.121 59.97 2 0.00025165 9534 Miao_Sh-H9_Flag_mass3_141226_01 69.081 64.026 0 0 0 0 0 0 0 0 0 0 0 0 0 787 602 770 7160 7952 7952 1 EQYGQYALAVR Unmodified 1296.6463 0.64625011 540 Q02413 DSG1 Desmoglein-1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 58.087 58.538 2 0.0053475 15712 Miao_Sh-H9_proteinG_mass3_141226_01 73.499 56.269 0 0 0 0 0 0 0 0 0 0 0 0 0 788 540 771 7161 7953 7953 1 ERNGLSLAALK Unmodified 1170.6721 0.67207093 377 P16401 HIST1H1B Histone H1.5 yes yes 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 3 3 2 94.188 79.869 3 0.0032998 12779 Miao_Sh-c_proteinG_mass3_141226_03 99.439 55.122 3576.6 0 0 0 0 0 1054 0 0 0 1505.9 0 1016.7 789 377 772 7162;7163;7164;7165;7166;7167;7168;7169 7954;7955;7956;7957;7958;7959 7956 6 ERPAAISIEIK Unmodified 1225.703 0.7030367 577 Q15208 STK38 Serine/threonine-protein kinase 38 yes yes 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 54.795 55.044 3 0.0096842 7851 Miao_Sh-H9_Flag_mass3_141226_03 69.864 26.567 6506.2 1233.3 0 0 58.146 0 0 0 2357.3 2652.2 205.25 0 0 790 577 773 7170;7171;7172;7173;7174 7960;7961 7961 0 ERPPNPIEFLASYLLK Unmodified 1886.0302 0.030184502 645 Q9C005 DPY30 Protein dpy-30 homolog yes yes 0 0 0 0 1 By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 115.52 115.82 3 0.0064709 26974 Miao_Sh-c_Flag_mass3_141226_01 50.131 36.189 2845.5 0 0 0 1341.1 0 0 0 0 1504.4 0 0 0 791 645 774 7175;7176;7177 7962;7963 7962 2 ERVEAVNMAEGIIHDTETK Unmodified 2141.0423 0.042282105 441 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 0 0 1 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 91.587 86.173 3;4 3.428E-08 15073 Miao_Sh-c_proteinG_mass3_141226_01 87.352 70.466 13094 0 0 0 6967 0 0 0 0 0 6126.7 0 0 792 441 775 7178;7179;7180 7964;7965;7966 7964 2 ERVEAVNMAEGIIHDTETK Oxidation (M) 2157.0372 0.037196727 441 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 1 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 60.63 62.225 4 0.0014736 17104 Miao_Sh-H9_proteinG_mass3_141226_01 50.916 41.441 7655.3 0 0 0 2076.3 1361.1 0 484.81 0 0 1981.2 1751.9 0 793 441 775 7181;7182;7183;7184;7185 7967;7968 7967 59 2 ERYKWPIQLHGSK 2 GlyGly (K) 1868.9646 0.96456455 685 yes yes 0 2 0 0 2 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 87.984 79.212 3 0.00049125 27285 Miao_Sh-c_proteinG_mass3_141226_03 82.774 44.981 33316 0 0 0 0 2001.1 23982 0 0 0 0 0 7332.6 + 794 685 776 7186;7187;7188 7969;7970 7970 2 ESDGGAGDLEDPW Unmodified 1346.5263 0.52625413 297 O75688-2 PPM1B Protein phosphatase 1B yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 2 1 1 71.994 73.523 2 0.00042273 14679 Miao_Sh-H9_Flag_mass3_141226_03 68.515 62.211 3647.8 0 0 0 0 0 0 0 0 3377.4 0 270.4 0 795 297 777 7189;7190;7191;7192;7193 7971;7972;7973;7974 7974 3 ESDTGLAPPALWDLAADK Unmodified 1868.9156 0.91560825 437 P35998;C9JLS9 PSMC2 26S protease regulatory subunit 7 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 2 1 1 1 97.383 93.012 2;3 0.0053251 20424 Miao_Sh-H9_Flag_mass3_141226_01 45.347 30.185 13580 0 0 3011.6 0 0 399.55 0 4703.7 3873.3 0 1591.9 0 796 437 778 7194;7195;7196;7197;7198;7199;7200 7975;7976;7977 7975 3 ESEAVEWQQK Unmodified 1232.5673 0.56733108 412 P26038 MSN Moesin yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 42.442 43.395 2 0.053571 10081 Miao_Sh-H9_proteinG_mass3_141226_01 47.844 36.585 0 0 0 0 0 0 0 0 0 0 0 0 0 797 412 779 7201 7978 7978 1 ESEIIDFFLGASLK Unmodified 1567.8134 0.81337501 375 P15880;E9PMM9;E9PQD7;I3L404;E9PPT0;H3BNG3 RPS2 40S ribosomal protein S2 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 4 3 2 2 2 3 4 3 3 1 3 108.44 105.71 2;3 2.8811E-06 39571 Miao_Sh-H9_proteinG_mass3_141226_01 115.06 82.735 79580 0 5173.7 8976 4944.7 5110.6 0 11970 4475.9 4070.3 10031 658.02 24171 798 375 780 7202;7203;7204;7205;7206;7207;7208;7209;7210;7211;7212;7213;7214;7215;7216;7217;7218;7219;7220;7221;7222;7223;7224;7225;7226;7227;7228;7229;7230;7231;7232;7233 7979;7980;7981;7982;7983;7984;7985;7986;7987;7988;7989;7990;7991;7992;7993;7994;7995;7996;7997;7998;7999;8000;8001;8002;8003;8004;8005;8006;8007;8008;8009;8010;8011;8012;8013;8014;8015;8016;8017;8018;8019;8020;8021;8022;8023;8024;8025;8026 8019 48 ESFSLVQVQPGVDIIR Unmodified 1785.9625 0.96249887 456 P46379;P46379-2;P46379-3;P46379-4;P46379-5 BAG6 Large proline-rich protein BAG6 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 2 1 2 87.369 87.653 2;3 0.0017451 17028 Miao_Sh-c_Flag_mass3_141226_03 57.148 46.103 5942.1 0 0 1258.8 0 0 0 0 1927.8 2755.5 0 0 0 799 456 781 7234;7235;7236;7237;7238 8027;8028;8029;8030 8027 4 ESGPSLVK Unmodified 815.43888 0.43888309 89;94 CON__ENSEMBL:ENSBTAP00000011227;CON__Q1RMK2;CON__ENSEMBL:ENSBTAP00000033053 no no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 32.578 35.245 2 0.020143 3410 Miao_Sh-c_proteinG_mass3_141226_01 80.165 34.15 8938.7 0 0 0 497.52 533.13 2777 0 0 0 2890.7 2240.4 0 + 800 89;94 782 7239;7240;7241;7242;7243 8031;8032 8031 2 ESIESEIR Unmodified 961.47164 0.47163978 483 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 46.891 46.891 2 0.031515 5621 Miao_Sh-H9_Flag_mass3_141226_01 73.665 16.384 1224 0 679.27 0 0 0 0 544.77 0 0 0 0 0 801 483 783 7244;7245 8033 8033 1 ESTLHLVLR Unmodified 1066.6135 0.61349341 45;239 P0CG47;P62979;P62987;J3QS39;J3QTR3;F5H6Q2;F5GYU3;F5H2Z3;F5H265;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q96C32;F5H041;P0CG48;M0R1M6;M0R2S1;J3QLP7;J3KSM4;J3QRK5;K7EMA8 UBB;RPS27A;UBA52;UBC;UBBP4 Polyubiquitin-B;Ubiquitin;Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-C;Ubiquitin no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 1 1 3 4 2 2 4 3 4 66.466 63.8 2;3 2.7091E-79 8261 Miao_Sh-H9_Flag_mass3_141226_03 220.71 168.95 1014700 121830 112930 109030 4320.1 2746.4 16426 206600 134750 245010 23935 9638.9 27473 802 45;239 784 7246;7247;7248;7249;7250;7251;7252;7253;7254;7255;7256;7257;7258;7259;7260;7261;7262;7263;7264;7265;7266;7267;7268;7269;7270;7271;7272;7273;7274;7275;7276 8034;8035;8036;8037;8038;8039;8040;8041;8042;8043;8044;8045;8046;8047;8048;8049;8050;8051;8052;8053;8054;8055;8056;8057;8058;8059;8060;8061;8062;8063;8064;8065;8066;8067;8068;8069;8070;8071;8072;8073;8074;8075;8076;8077;8078;8079;8080;8081;8082;8083;8084;8085;8086;8087;8088;8089;8090;8091;8092;8093;8094;8095;8096;8097;8098;8099;8100;8101;8102;8103;8104;8105;8106 8086 73 ESVNSHVTTLGPQNFPANDK Unmodified 2154.0342 0.03416026 609 Q8IXB1;Q8IXB1-2 DNAJC10 DnaJ homolog subfamily C member 10 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 1 1 3 2 60.478 58.022 3 3.5656E-12 13742 Miao_Sh-H9_proteinG_mass3_141226_03 90.397 64.551 6880.3 0 0 0 0 0 4618.6 0 0 0 1315 0 946.69 803 609 785 7277;7278;7279;7280;7281;7282;7283 8107;8108;8109;8110;8111;8112 8112 6 ESYDDVSSFR Unmodified 1203.5044 0.50439647 222 Q99848;H7C2Q8 EBNA1BP2 Probable rRNA-processing protein EBP2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 51.544 52.989 2 0.0015591 13839 Miao_Sh-H9_proteinG_mass3_141226_01 115.42 97.523 8552.4 0 158.7 0 0 0 3291.6 194.25 174.21 0 2534.4 0 2199.2 804 222 786 7284;7285;7286;7287;7288;7289 8113;8114 8113 2 ESYSVYVYK Unmodified 1136.539 0.53899107 37 Q93079;Q99879;Q99877;Q5QNW6;P58876;O60814;P62807;P57053;U3KQK0;B4DR52;Q5QNW6-2;Q99880 HIST1H2BH;HIST1H2BM;HIST1H2BN;HIST2H2BF;HIST1H2BD;HIST1H2BK;HIST1H2BC;H2BFS;HIST1H2BL Histone H2B type 1-H;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-C/E/F/G/I;Histone H2B type F-S;Histone H2B;Histone H2B type 1-L yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 3 2 1 3 3 3 1 61.187 60.703 2 0.0013007 13895 Miao_Sh-H9_proteinG_mass3_141226_03 116.73 80.335 202460 5953.7 550.57 0 7961.2 5506.9 42812 1145.9 10036 2040.7 45227 43213 38012 805 37 787 7290;7291;7292;7293;7294;7295;7296;7297;7298;7299;7300;7301;7302;7303;7304;7305;7306;7307;7308;7309;7310;7311 8115;8116;8117;8118;8119;8120;8121;8122;8123;8124;8125;8126;8127;8128;8129;8130;8131;8132;8133;8134;8135;8136;8137;8138;8139;8140;8141;8142 8141 28 ETAENYLGHTAK Unmodified 1332.631 0.63099397 441 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 4 1 2 1 3 4 2 43.325 44.646 2;3 1.3569E-68 8505 Miao_Sh-H9_proteinG_mass3_141226_03 205.31 144.4 214530 594.38 0 0 2235.9 2096 56841 0 0 24.7 61231 37938 53572 806 441 788 7312;7313;7314;7315;7316;7317;7318;7319;7320;7321;7322;7323;7324;7325;7326;7327;7328;7329 8143;8144;8145;8146;8147;8148;8149;8150;8151;8152;8153;8154;8155;8156;8157;8158;8159;8160;8161;8162;8163;8164;8165;8166;8167;8168;8169;8170;8171;8172;8173;8174 8172 32 ETDLQELFRPFGSISR Unmodified 1893.9585 0.95847612 248 O75821;K7EP16;K7ENA8 EIF3G Eukaryotic translation initiation factor 3 subunit G yes no 0 0 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching 1 2 1 1 1 1 1 94.649 94.436 3 0.00062478 37611 Miao_Sh-H9_proteinG_mass3_141226_01 66.387 49.64 8231.6 2932.2 1303.5 0 0 0 0 1534.5 0 2461.3 0 0 0 807 248 789 7330;7331;7332;7333;7334;7335;7336;7337 8175;8176;8177;8178;8179;8180;8181 8181 5 ETENDDLTNVIQK Unmodified 1517.7209 0.72093119 302 O95373 IPO7 Importin-7 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 2 1 1 4 2 51.867 53.653 2;3 0.01502 14312 Miao_Sh-H9_proteinG_mass3_141226_01 53.377 42.119 12087 0 1497.2 2731.3 0 0 3122.1 0 0 0 1953.3 2783.2 0 808 302 790 7338;7339;7340;7341;7342;7343;7344;7345;7346;7347 8182;8183;8184;8185 8183 4 ETGSPKMDAK Oxidation (M);QQTGG (K) 1549.7042 0.70423527 667 Q9ULD9;Q9ULD9-2 ZNF608 Zinc finger protein 608 yes no 0 0 1 1 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 2 44.967 47.574 2 0.018769 11117 Miao_Sh-H9_proteinG_mass3_141226_02 57.885 29.309 0 0 0 0 0 0 0 0 0 0 0 0 0 809 667 791 7348;7349 8186;8187 8186 85 2 ETGVDLTK Unmodified 861.44436 0.4443624 441 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 34.415 35.568 2 0.010941 3449 Miao_Sh-c_proteinG_mass3_141226_01 78.113 34.344 0 0 0 0 0 0 0 0 0 0 0 0 0 810 441 792 7350 8188 8188 1 ETIPDIDPNAK Unmodified 1211.6034 0.60338224 478 P53621;P53621-2 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 60.794 57.473 2 0.05022 13681 Miao_Sh-H9_proteinG_mass3_141226_02 51.286 35.142 6069.7 0 0 0 0 0 0 0 0 849.61 2195.4 2476.6 548.09 811 478 793 7351;7352;7353;7354 8189 8189 1 ETLLNSATTSLNSK Unmodified 1477.7624 0.76240208 65 P50991;B7Z9L0;P50991-2;B7Z2F4 CCT4 T-complex protein 1 subunit delta yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 60.271 60.522 2 0.00412 8709 Miao_Sh-c_Flag_mass3_141226_02 62.287 38.968 0 0 0 0 0 0 0 0 0 0 0 0 0 812 65 794 7355 8190 8190 1 ETMQIDERKR Oxidation (M);GlyGly (K) 1434.6885 0.68852563 303 O95391 SLU7 Pre-mRNA-splicing factor SLU7 yes yes 0 1 1 0 2 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 2 1 1 1 1 1 1 1 71.276 72.519 2 0.026475 12640 Miao_Sh-c_Flag_mass3_141226_02 47.228 19.746 4565300 809450 876410 794180 13709 23459 38745 1006200 0 971210 31916 0 0 813 303 795 7356;7357;7358;7359;7360;7361;7362;7363;7364;7365 8191;8192;8193;8194;8195 8192 38 4 ETNLDSLPLVDTHSK Unmodified 1667.8366 0.83662965 346 P08670 VIM Vimentin yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 1 1 1 1 61.642 63.464 3 2.9915E-05 17325 Miao_Sh-H9_proteinG_mass3_141226_01 83.751 72.113 43179 1792.9 0 0 3842.5 4453.7 6671.3 3192 0 4169.6 6481.9 6128.2 6447.1 814 346 796 7366;7367;7368;7369;7370;7371;7372;7373;7374;7375;7376 8196;8197;8198;8199;8200;8201;8202;8203;8204;8205;8206;8207;8208;8209;8210;8211;8212 8206 17 ETPFELIEALLK Unmodified 1401.7755 0.77553294 548 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 2 1 1 119.48 120.59 2 0.022152 32286 Miao_Sh-c_proteinG_mass3_141226_01 56.493 32.271 39482 0 9423.7 4760.7 14364 6163.4 0 0 0 4770.1 0 0 0 815 548 797 7377;7378;7379;7380;7381;7382 8213;8214;8215 8214 3 ETPFLSNPGTNLVFEDEITALQPEVDK Unmodified 3002.4761 0.47606304 393 P21589;P21589-2;Q96B60 NT5E 5'-nucleotidase yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 106.22 106.12 3 0.0035044 26078 Miao_Sh-H9_Flag_mass3_141226_02 38.428 33.728 6445.2 2494.3 0 0 0 0 0 0 3950.9 0 0 0 0 816 393 798 7383;7384 8216;8217 8217 2 ETTDTDTADQVIASFK Unmodified 1740.8054 0.8053891 283 O43707;O43707-2;F5GXS2;O43707-3;H7C144 ACTN4 Alpha-actinin-4 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 2 1 2 1 2 1 1 1 2 5 2 83.469 77.826 2;3 6.991E-06 26030 Miao_Sh-H9_proteinG_mass3_141226_01 82.59 76.695 23538 2019.2 0 2569.9 3433.8 0 2149.8 923.49 1331.6 1378.6 787.32 1955 6989.7 817 283 799 7385;7386;7387;7388;7389;7390;7391;7392;7393;7394;7395;7396;7397;7398;7399;7400;7401;7402;7403;7404 8218;8219;8220;8221;8222;8223;8224;8225;8226;8227;8228;8229;8230;8231;8232 8222 15 ETVSEESNVLCLSK Unmodified 1593.7556 0.75560214 366 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 59.811 60.262 2 0.0056594 16405 Miao_Sh-H9_proteinG_mass3_141226_01 58.814 43.652 0 0 0 0 0 0 0 0 0 0 0 0 0 818 366 800 7405 8233 8233 1 ETVVEVPQVTWEDIGGLEDVKR Unmodified 2497.27 0.27003344 483 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 91.658 90.806 3 1.4429E-45 20040 Miao_Sh-H9_Flag_mass3_141226_01 152.06 134.63 0 0 0 0 0 0 0 0 0 0 0 0 0 819 483 801 7406 8234 8234 1 ETYEVLLSFIQAALGDQPR Unmodified 2149.1055 0.10553429 295 O75643;C9JAQ9;O75643-2 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 2 1 120.08 120.33 3 0.0044413 28680 Miao_Sh-c_Flag_mass3_141226_01 46.461 34.871 7866.5 4968 0 0 0 0 0 0 2898.5 0 0 0 0 820 295 802 7407;7408;7409;7410 8235;8236;8237 8235 3 EVAAFAQFGSDLDAATQQLLSR Unmodified 2337.1601 0.16008906 410 P25705;P25705-2;P25705-3 ATP5A1 ATP synthase subunit alpha, mitochondrial yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 1 1 1 1 114.54 114.09 3 1.4188E-46 29119 Miao_Sh-H9_Flag_mass3_141226_03 149.84 139.07 31087 3015.5 1315.8 5875.6 0 3435 0 5159.8 6985 0 0 5300.4 0 821 410 803 7411;7412;7413;7414;7415;7416;7417;7418 8238;8239;8240;8241;8242;8243;8244 8243 5 EVASNSELVQSSR Unmodified 1404.6845 0.68448611 102 P08779;CON__P08779;K7ENW6 KRT16 Keratin, type I cytoskeletal 16 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 2 1 1 37.743 39.322 2 1.1279E-13 8495 Miao_Sh-H9_proteinG_mass3_141226_01 141.65 69.758 2822.2 0 0 0 0 0 0 0 0 0 289.33 2532.9 0 + 822 102 804 7419;7420;7421;7422 8245;8246;8247;8248 8245 4 EVATAIR Unmodified 758.42865 0.42865276 375 P15880;H0YEN5;E9PMM9;I3L404;E9PPT0;E9PM36 RPS2 40S ribosomal protein S2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 31.703 32.254 2 0.047426 6554 Miao_Sh-H9_proteinG_mass3_141226_01 67.032 6.3839 0 0 0 0 0 0 0 0 0 0 0 0 0 823 375 805 7423 8249 8249 1 EVATNSELVQSGK Unmodified 1360.6834 0.68342347 97;109 P02533;CON__P02533;K7ESE1;Q04695;CON__Q04695;CON__Q9QWL7;F5GWP8 KRT14;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 no no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 37.025 38.838 2 9.1115E-18 7879 Miao_Sh-H9_proteinG_mass3_141226_03 157.43 119.16 16969 123.5 0 0 341.86 0 6146.4 0 70.2 0 0 5892.7 4394.4 + 824 97;109 806 7424;7425;7426;7427;7428;7429;7430 8250;8251;8252;8253;8254;8255 8254 6 EVCGFAPYER Unmodified 1226.539 0.53900784 681 Q9Y3U8;J3QSB5 RPL36 60S ribosomal protein L36 yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 3 52.708 55.222 2 2.9942E-25 13173 Miao_Sh-H9_proteinG_mass3_141226_03 163.65 128.47 43819 2056.9 0 0 2577.6 2930.8 11684 0 0 0 12956 10836 777.7 825 681 807 7431;7432;7433;7434;7435;7436;7437;7438;7439 8256;8257;8258;8259;8260;8261;8262;8263;8264;8265 8264 10 EVDIGIPDATGR Unmodified 1241.6252 0.62518031 483 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 1 1 2 2 2 2 3 61.989 61.356 2 3.5385E-31 10150 Miao_Sh-H9_Flag_mass3_141226_03 170.68 115 43886 0 0 0 0 0 7691 7388.9 18905 7330 0 482.12 2089.4 826 483 808 7440;7441;7442;7443;7444;7445;7446;7447;7448;7449;7450;7451;7452;7453;7454 8266;8267;8268;8269;8270;8271;8272;8273;8274;8275;8276;8277;8278;8279;8280;8281 8278 15 EVEVVEIIQATIIR Unmodified 1610.9243 0.92432245 573 Q14764;H3BQK6;I3L155 MVP Major vault protein yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 4 4 2 1 2 2 111.45 106.02 2;3 5.0384E-106 27618 Miao_Sh-c_proteinG_mass3_141226_02 220.69 181.82 96181 0 0 0 28101 12612 17947 0 518.57 0 17421 0 19582 827 573 809 7455;7456;7457;7458;7459;7460;7461;7462;7463;7464;7465;7466;7467;7468;7469 8282;8283;8284;8285;8286;8287;8288;8289;8290;8291;8292;8293;8294;8295;8296;8297;8298;8299;8300;8301;8302;8303;8304;8305;8306;8307;8308 8289 25 EVFEDAAEIR Unmodified 1177.5615 0.56151742 389 P19338;H7BY16 NCL Nucleolin yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 2 1 1 1 1 3 1 56.442 57.43 2 4.173E-14 8906 Miao_Sh-H9_Flag_mass3_141226_03 133.91 69.427 39299 0 0 0 4737.2 0 10347 4977 9820.9 9417 0 0 0 828 389 810 7470;7471;7472;7473;7474;7475;7476;7477;7478;7479 8309;8310;8311;8312;8313;8314;8315;8316;8317 8316 9 EVGDGTTSVVIIAAELLK Unmodified 1814.0037 0.0036949795 386 P17987;E7ERF2;F5H676;F5H136;F5H726 TCP1 T-complex protein 1 subunit alpha yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 3 1 1 1 111.88 112.38 2;3 5.5063E-07 27251 Miao_Sh-H9_Flag_mass3_141226_01 82.765 68.134 7265.4 0 0 0 1717.1 0 0 2435.3 3113 0 0 0 0 829 386 811 7480;7481;7482;7483;7484;7485;7486;7487;7488 8318;8319;8320;8321;8322;8323;8324;8325 8321 8 EVGSIIGK Unmodified 801.45962 0.45961853 581;580 Q15366;Q15366-6;Q15366-3;Q15366-2;Q15366-4;Q15366-5;B4DLC0;H3BRU6;F8VZX2;B4DXP5;Q15366-7;F8W0G4;F8W1G6;P57721;P57723;H3BSP4;C9K0A2;F8WC71;F8VTZ0;C9IZV9;C9J7A9;C9JSA6;C9J5V4;C9JTY5;C9JZY3;J3QT27;C9J0A4;E9PFP8;P57721-2;P57721-3;P57721-5;P57723-2;P57721-4;Q15365 PCBP2;PCBP3;PCBP4;PCBP1 Poly(rC)-binding protein 2;Poly(rC)-binding protein 3;Poly(rC)-binding protein 4;Poly(rC)-binding protein 1 no no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 1 39.177 40.881 2 0.047594 8816 Miao_Sh-H9_proteinG_mass3_141226_03 66.351 23.437 3594.7 215.5 250.68 140.73 0 0 932.36 322.15 0 0 0 730.05 1003.2 830 581;580 812 7489;7490;7491;7492;7493;7494;7495 8326;8327 8327 2 EVIELPLTNPELFQR Unmodified 1796.9672 0.96724989 508 P62333;H0YJC0;H0YJS8 PSMC6 26S protease regulatory subunit 10B yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 2 3 1 2 94.879 94.027 3 5.1781E-11 20919 Miao_Sh-H9_Flag_mass3_141226_01 130.2 104.47 2339.8 0 0 0 0 0 0 2339.8 0 0 0 0 0 831 508 813 7496;7497;7498;7499;7500;7501;7502;7503 8328;8329;8330;8331;8332;8333;8334;8335;8336 8333 9 EVLEYNAIGGK Unmodified 1191.6136 0.61355299 367 P14324;P14324-2 FDPS Farnesyl pyrophosphate synthase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 54.332 54.583 2 0.031578 8024 Miao_Sh-H9_Flag_mass3_141226_03 52.247 20.825 0 0 0 0 0 0 0 0 0 0 0 0 0 832 367 814 7504 8337 8337 1 EVLINNINR Unmodified 1083.6037 0.60365701 323 P05198;H0YJS4;G3V4T5 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 50.151 50.677 2 0.005581 5603 Miao_Sh-c_Flag_mass3_141226_03 85.67 31.234 0 0 0 0 0 0 0 0 0 0 0 0 0 833 323 815 7505;7506 8338;8339 8338 2 EVNLGLLAK Unmodified 955.57023 0.57023162 664 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 63.241 65.386 2 0.0050175 17955 Miao_Sh-H9_proteinG_mass3_141226_02 86.136 39.746 14621 0 0 0 1325.8 1190.3 0 0 0 0 4076.8 3737.9 4290.5 834 664 816 7507;7508;7509;7510;7511;7512 8340;8341;8342;8343;8344;8345;8346;8347 8344 8 EVPAVPETLK Unmodified 1081.6019 0.60192568 388 P18124 RPL7 60S ribosomal protein L7 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 51.779 53.94 2 0.002442 13013 Miao_Sh-H9_proteinG_mass3_141226_03 96.957 55.839 38310 0 0 0 833.6 1144.2 9529.8 2364.6 0 3038.4 12901 0 8498.7 835 388 817 7513;7514;7515;7516;7517;7518;7519 8348;8349;8350;8351;8352;8353;8354 8354 7 EVQALIAEGIALVWESYK Unmodified 2018.0724 0.072443247 568 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 120.71 122.01 3 0.033548 31589 Miao_Sh-H9_Flag_mass3_141226_02 32.695 23.432 6041.8 1886 829.9 0 0 1389.9 0 0 1936 0 0 0 0 836 568 818 7520;7521;7522;7523 8355 8355 1 EVVDYIIFGTVIQEVK Unmodified 1851.003 0.002966698 484 P55084;P55084-2;B5MD38;F5GZQ3;C9JEY0;C9JE81 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 2 1 1 1 2 1 109.02 104.02 3 0.0048784 25923 Miao_Sh-H9_Flag_mass3_141226_02 50.305 36.221 12250 1662.9 0 0 2491.3 0 1903.8 2365.1 1894.9 0 1452.1 480.06 0 837 484 819 7524;7525;7526;7527;7528;7529;7530;7531;7532 8356;8357 8357 2 EVVEEAENGR Unmodified 1130.5204 0.52038089 68 P06454;P06454-2;B8ZZQ6;B8ZZA1;B8ZZW7;H7C2N1 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 33.339 33.055 2 1.077E-13 3171 Miao_Sh-H9_Flag_mass3_141226_03 153.1 130.46 471.67 0 0 0 0 0 0 30.653 0 187.97 253.04 0 0 838 68 820 7533;7534;7535 8358 8358 1 EVVETPLLHPER Unmodified 1417.7565 0.75652884 437 P35998;B7Z5E2 PSMC2 26S protease regulatory subunit 7 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 53.6 54.823 2;3 0.00024552 7745 Miao_Sh-H9_Flag_mass3_141226_01 110.08 47.611 5944.2 1236.2 0 0 387.96 457.66 0 2670.9 0 0 1191.5 0 0 839 437 821 7536;7537;7538;7539;7540;7541 8359;8360;8361 8360 3 EVYAAAAEVLGLILR Unmodified 1586.9032 0.90319307 533 P78527;E7EUY0;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 3 3 1 116.17 116.16 2;3 4.328E-13 28999 Miao_Sh-H9_Flag_mass3_141226_01 131.35 116.56 6840.6 2006.5 2599.4 0 0 0 0 1819.9 0 414.75 0 0 0 840 533 822 7542;7543;7544;7545;7546;7547;7548;7549;7550;7551 8362;8363;8364;8365;8366;8367;8368;8369 8365 8 EVYQQQQYGSGGR Unmodified 1498.6801 0.68006943 115 Q99729-3;D6R9P3;D6RD18;D6RBZ0;Q99729-2;Q99729;Q99729-4 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 33.551 36.475 2 5.7816E-38 7219 Miao_Sh-H9_proteinG_mass3_141226_02 172.92 144.83 5817.6 0 0 0 0 0 1720 0 0 0 2074.1 0 2023.5 841 115 823 7552;7553;7554;7555 8370;8371;8372;8373 8372 4 EWSGLLEELAR Unmodified 1301.6616 0.66156582 539 Q01813;Q01813-2;V9GYV7;Q5VSR5 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 2 1 93.706 93.53 2 0.010365 21693 Miao_Sh-H9_Flag_mass3_141226_02 66.267 28.708 2902.2 1170.2 0 0 0 0 0 0 0 1732 0 0 0 842 539 824 7556;7557;7558;7559 8374;8375;8376 8375 3 EYFSWEGAFQHVGK Unmodified 1683.7682 0.76815616 417 P26641;B4DTG2 EEF1G Elongation factor 1-gamma yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 2 2 1 2 1 83.734 81.136 3 9.9478E-05 15160 Miao_Sh-c_Flag_mass3_141226_01 85.536 66.958 27145 2731 2696.7 0 520.28 1997.7 804.28 4922.1 7276.6 3852.2 2066.5 277.83 0 843 417 825 7560;7561;7562;7563;7564;7565;7566;7567;7568;7569;7570;7571;7572 8377;8378;8379;8380;8381;8382;8383;8384;8385;8386 8377 10 EYNEFAEVFLK Unmodified 1387.666 0.66598249 302 O95373 IPO7 Importin-7 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 2 2 1 1 3 1 91.109 88.202 2 0.0039513 19788 Miao_Sh-c_proteinG_mass3_141226_02 100.31 75.804 8900.1 0 2631.6 0 0 0 639.15 1752.4 1924 1953 0 0 0 844 302 826 7573;7574;7575;7576;7577;7578;7579;7580;7581;7582;7583 8387;8388;8389;8390;8391;8392;8393;8394 8389 8 EYQDLLNVK Unmodified 1120.5764 0.57643921 346 P08670;B0YJC4;B0YJC5;P17661;P07197;P07196;Q16352;E7EMV2;E7ESP9;P07197-2 VIM;DES;NEFM;NEFL;INA Vimentin;Desmin;Neurofilament medium polypeptide;Neurofilament light polypeptide;Alpha-internexin no no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 1 1 1 1 3 1 60.114 61.441 2 0.0021372 15414 Miao_Sh-c_proteinG_mass3_141226_03 113.1 60.413 33891 0 1170.1 0 0 0 7919.5 2989.4 3065 2676.4 546.5 4586.8 10938 845 346 827 7584;7585;7586;7587;7588;7589;7590;7591;7592;7593;7594 8395;8396;8397;8398;8399;8400;8401;8402;8403;8404;8405 8395 11 EYQELMNVK Unmodified 1152.5485 0.5485099 98;100 P02538;CON__P02538;P48668;CON__P04259;CON__P48668;P05787;CON__P05787;P05787-2;CON__H-INV:HIT000292931 KRT6A;KRT6C;KRT8 Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 8 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 54.621 56.592 2 0.052889 13697 Miao_Sh-H9_proteinG_mass3_141226_02 57.708 32.933 4824.7 453.82 260.55 0 0 0 934.82 0 0 1198.4 0 1349.9 627.2 + 846 98;100 828 7595;7596;7597;7598;7599;7600 8406 8406 1 EYTDVYPEIIER Unmodified 1525.73 0.73003931 591 Q9UNF1;Q9Y5V3;Q5H907;Q5H909;Q9UNF1-2;Q9Y5V3-2 MAGED2;MAGED1 Melanoma-associated antigen D2;Melanoma-associated antigen D1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 70.78 70.078 2 0.002035 13391 Miao_Sh-H9_Flag_mass3_141226_02 100.07 75.562 0 0 0 0 0 0 0 0 0 0 0 0 0 847 591 829 7601 8407 8407 1 EYTINIHK Unmodified 1016.5291 0.52909508 518 P62899;P62899-3;P62899-2;H7C2W9;C9JU56;B7Z4E3;B7Z4C8;B8ZZK4 RPL31 60S ribosomal protein L31 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 1 2 1 1 1 1 1 1 42.551 43.84 2 0.004299 9705 Miao_Sh-H9_proteinG_mass3_141226_03 95.531 69.422 6999.6 0 0 171.94 0 0 646.78 97.769 213 335.92 4102.6 1431.6 0 848 518 830 7602;7603;7604;7605;7606;7607;7608;7609;7610 8408;8409;8410 8410 3 FAAATGATPIAGR Unmodified 1202.6408 0.6407708 2 P08865;C9J9K3;A6NE09 RPSA;RPSAP58 40S ribosomal protein SA yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 47.955 46.952 2 0.017384 5785 Miao_Sh-H9_Flag_mass3_141226_02 51.726 31.949 0 0 0 0 0 0 0 0 0 0 0 0 0 849 2 831 7611 8411 8411 1 FADLSEAANR Unmodified 1092.52 0.51998696 346 P08670;B0YJC4;B0YJC5;Q5JVS8 VIM Vimentin yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 1 1 2 1 2 1 45.457 47.096 2 4.1431E-101 11043 Miao_Sh-H9_proteinG_mass3_141226_02 228.2 167.38 52240 0 938.03 0 871.12 0 7321.7 1056.2 1609.8 0 10459 19673 10311 850 346 832 7612;7613;7614;7615;7616;7617;7618;7619;7620;7621;7622;7623;7624;7625 8412;8413;8414;8415;8416;8417;8418;8419;8420;8421;8422;8423;8424 8421 13 FAEAFEAIPR Unmodified 1149.5819 0.58185893 469 P50990;P50990-2;P50990-3 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 1 1 1 3 68.788 67.501 2 9.4302E-08 18720 Miao_Sh-H9_proteinG_mass3_141226_03 134.57 106.83 15634 0 2528.2 0 0 3635 834.69 4644.6 0 3626.4 0 0 365.47 851 469 833 7626;7627;7628;7629;7630;7631;7632;7633;7634;7635;7636;7637 8425;8426;8427;8428;8429;8430;8431;8432;8433;8434 8433 10 FAGVDIR Unmodified 776.41809 0.41808807 259 P62249;M0R210;M0R3H0;M0QX76;M0R1M5;Q6IPX4 RPS16 40S ribosomal protein S16 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 51.299 53.463 2 2.7184E-07 12350 Miao_Sh-H9_proteinG_mass3_141226_03 124.34 49.904 16625 0 140.73 0 0 0 4226.4 0 0 269.37 4299.6 3431.8 4256.9 852 259 834 7638;7639;7640;7641;7642;7643 8435;8436;8437;8438;8439;8440;8441 8441 6 FAIQDISVEETSAK Unmodified 1536.7672 0.7671531 283;362 O43707;P35609;P35609-2;Q08043;G3V2W4;G3V2N5;G3V5M4;G3V2X9;G3V2E8;P12814;P12814-2;P12814-3;P12814-4;H9KV75 ACTN4;ACTN2;ACTN3;ACTN1 Alpha-actinin-4;Alpha-actinin-2;Alpha-actinin-3;Alpha-actinin-1 no no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 3 1 4 1 2 2 4 1 2 67.802 68.655 2;3 1.0134E-08 19056 Miao_Sh-H9_proteinG_mass3_141226_03 136.14 89.73 54062 3049.4 0 6405.8 420.86 0 11239 5066 2821.3 3882.3 12993 952.58 7231.5 853 283;362 835 7644;7645;7646;7647;7648;7649;7650;7651;7652;7653;7654;7655;7656;7657;7658;7659;7660;7661;7662;7663;7664 8442;8443;8444;8445;8446;8447;8448;8449;8450;8451;8452;8453;8454 8453 12 FALITWIGENVSGLQR Unmodified 1802.9679 0.9679186 220 Q14019;H3BT58 COTL1 Coactosin-like protein yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 109.59 109.54 3 0.00084626 27534 Miao_Sh-H9_Flag_mass3_141226_03 64.407 41.914 0 0 0 0 0 0 0 0 0 0 0 0 0 854 220 836 7665 8455 8455 1 FAQFDEYQLAK Unmodified 1358.6507 0.65066678 639 Q99973;Q99973-2;G3V470 TEP1 Telomerase protein component 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 63.839 67.698 2 0.029169 12290 Miao_Sh-c_proteinG_mass3_141226_02 53.567 21.152 0 0 0 0 0 0 0 0 0 0 0 0 0 855 639 837 7666 8456 8456 1 FAQHGTFEYEYSQR Unmodified 1761.7747 0.7746981 399 P23246;P23246-2;H0Y9K7 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 47.982 53.044 3 0.029531 6715 Miao_Sh-c_proteinG_mass3_141226_02 40.751 32.627 2186.2 0 0 0 0 1237.6 948.55 0 0 0 0 0 0 856 399 838 7667;7668 8457 8457 1 FASENDLPEWK Unmodified 1334.6143 0.61428128 78 P43487;C9JJ34;C9JDM3;C9JIC6;C9JXG8;C9JGV6 RANBP1 Ran-specific GTPase-activating protein yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 1 1 67.159 68.075 2 0.0067768 10546 Miao_Sh-c_Flag_mass3_141226_02 78.342 64.107 15578 2004.6 8534.7 1172.7 0 0 1716.9 0 977.99 777.41 393.9 0 0 857 78 839 7669;7670;7671;7672;7673;7674;7675 8458;8459 8459 2 FASFIDK Unmodified 826.4225 0.42250475 98;105;108;100 P02538;CON__P02538;P48668;CON__P04259;CON__P48668;O95678;F8W0C6;CON__O95678;Q01546;CON__Q8VED5;P12035;Q5XKE5;CON__P07744;CON__Q5XKE5;J3QST3;CON__P12035;CON__Q01546;P19013;F8VRG4;F5H8K9;CON__P19013;H0YHD9;F8VS61;P05787;CON__P05787;P05787-2;F8VUG2;F8W1U3;P08729;Q9NSB2;CON__Q9DCV7;CON__Q3KNV1;CON__P08729;CON__Q9H552;CON__Q9NSB2;CON__Q6ISB0;P13647;CON__P13647;P35908;CON__P35908;CON__Q6NXH9;Q7Z794;CON__Q9R0H5;CON__Q7Z794 KRT6A;KRT6C;KRT75;KRT5;KRT76;KRT3;KRT79;KRT4;KRT8;KRT72;KRT77;KRT7;KRT84;KRT2 Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 79;Keratin, type II cytoskeletal 4;Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 7;Keratin, type II cuticular Hb4;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 1b no no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 3 1 2 1 2 3 65.834 62.078 2 0.0034994 13423 Miao_Sh-H9_proteinG_mass3_141226_03 129.55 20.858 69269 0 0 0 3351.3 1967.9 18326 2941.1 312.13 0 15494 14164 12712 + 858 98;100;105;108 840 7676;7677;7678;7679;7680;7681;7682;7683;7684;7685;7686;7687;7688;7689;7690 8460;8461;8462;8463;8464;8465;8466;8467;8468;8469;8470;8471;8472;8473;8474;8475;8476;8477;8478;8479 8476 19 FATEAAITILR Unmodified 1204.6816 0.68157298 386 P17987;F5H282;E7EQR6 TCP1 T-complex protein 1 subunit alpha yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 1 3 1 2 2 1 2 1 82.665 80.084 2 0.0010342 30605 Miao_Sh-H9_proteinG_mass3_141226_02 102.4 73.442 6787 1311.4 0 394.96 0 0 0 0 941.47 0 0 3630.9 508.32 859 386 841 7691;7692;7693;7694;7695;7696;7697;7698;7699;7700;7701;7702;7703 8480;8481;8482;8483;8484;8485;8486;8487;8488;8489;8490 8490 11 FATHAAALSVR Unmodified 1142.6196 0.61964142 399 P23246;P23246-2 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 2 1 1 42.844 44.001 3 0.00042801 10263 Miao_Sh-H9_proteinG_mass3_141226_01 100.93 74.489 6489.3 248.76 255.47 224.29 297.01 0 599.05 326.09 0 481.53 2574.1 1483 0 860 399 842 7704;7705;7706;7707;7708;7709;7710;7711;7712;7713 8491;8492;8493;8494 8494 4 FCIWTESAFR Unmodified 1315.6019 0.60194245 438 P36578;H3BM89 RPL4 60S ribosomal protein L4 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 2 1 1 83.732 83.999 2 0.0049239 18214 Miao_Sh-c_proteinG_mass3_141226_02 91.658 50.21 6528.4 917.39 0 0 3292.6 0 0 2318.3 0 0 0 0 0 861 438 843 7714;7715;7716;7717;7718;7719 8495;8496;8497;8498;8499 8497 5 FDAGELITQR Unmodified 1148.5826 0.58258722 85 P35232;C9JW96;C9JZ20;E7ESE2;E9PCW0 PHB Prohibitin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 70.885 66.257 2 0.021443 11460 Miao_Sh-H9_Flag_mass3_141226_03 65.179 33.89 4219.2 0 0 0 0 0 570.61 1459.5 0 2189.2 0 0 0 862 85 844 7720;7721;7722 8500;8501 8501 2 FDASFFGVHPK Unmodified 1250.6084 0.60840804 464 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 0 0 By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 2 1 1 1 1 1 68.947 68.956 3 0.004081 11847 Miao_Sh-c_Flag_mass3_141226_02 69.65 47.121 20144 1164.6 1658.3 2597.3 1822.9 2945.1 0 1383.6 3497.8 4196.2 304.05 0 574.19 863 464 845 7723;7724;7725;7726;7727;7728;7729;7730;7731;7732;7733 8502;8503;8504 8502 3 FDCSSAPDICSNLYVFQPSLAVFK Unmodified 2764.2877 0.28767411 609 Q8IXB1;Q8IXB1-2 DNAJC10 DnaJ homolog subfamily C member 10 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 115.27 102.48 3 5.4859E-07 37069 Miao_Sh-H9_proteinG_mass3_141226_03 61.04 57.494 0 0 0 0 0 0 0 0 0 0 0 0 0 864 609 846 7734;7735;7736 8505;8506;8507 8507 3 FDDDFHIYVYDLVK Unmodified 1787.8407 0.8406524 682 Q9Y657;Q5JUX0;Q9BPZ2;Q99865;Q5JZB7 SPIN1;SPIN3;SPIN2B;SPIN2A Spindlin-1;Spindlin-3;Spindlin-2B;Spindlin-2A yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 97.64 95.409 3 0.033014 20918 Miao_Sh-H9_Flag_mass3_141226_01 39.73 30.408 2899.7 0 0 0 0 377.49 0 1514.6 0 464.15 543.47 0 0 865 682 847 7737;7738;7739;7740 8508 8508 1 FDDGAGGDNEVQR Unmodified 1378.5749 0.57493566 437 P35998;B7Z5E2 PSMC2 26S protease regulatory subunit 7 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 36.54 36.52 2 0.0051435 3397 Miao_Sh-c_Flag_mass3_141226_03 64.798 56.098 716.77 27.412 199.9 233.76 0 0 0 29.351 226.35 0 0 0 0 866 437 848 7741;7742;7743;7744;7745 8509 8509 1 FDFVHDLVLYLYR Unmodified 1698.877 0.87697832 535 Q00610;Q00610-2 CLTC Clathrin heavy chain 1 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 2 1 1 1 111.9 112.89 3 5.9139E-18 26119 Miao_Sh-c_Flag_mass3_141226_01 155.47 141.46 28628 3819.8 6732.8 6967.4 0 1928.9 0 3206.5 5972.4 0 0 0 0 867 535 849 7746;7747;7748;7749;7750;7751;7752 8510;8511;8512;8513;8514;8515;8516;8517;8518 8510 8 FDGALNVDLTEFQTNLVPYPR Unmodified 2408.2012 0.20122559 529 P68363 TUBA1B Tubulin alpha-1B chain no no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 3 3 1 1 1 2 3 8 108.42 102.58 2;3 8.3772E-86 36850 Miao_Sh-H9_proteinG_mass3_141226_01 190.26 176.11 114770 691.41 10183 0 22095 0 0 551.31 0 0 35520 36776 8948.7 868 529 850 7753;7754;7755;7756;7757;7758;7759;7760;7761;7762;7763;7764;7765;7766;7767;7768;7769;7770;7771;7772;7773;7774;7775 8519;8520;8521;8522;8523;8524;8525;8526;8527;8528;8529;8530;8531;8532;8533;8534;8535;8536;8537;8538;8539 8526 19 FDLGQDVIDFTGHALALYR Unmodified 2150.0797 0.07965389 135 P50395;E7EU23;P50395-2;P31150;Q5SX91;Q5SX87 GDI2;GDI1 Rab GDP dissociation inhibitor beta;Rab GDP dissociation inhibitor alpha yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 112.52 112.49 3 2.6549E-09 27532 Miao_Sh-H9_Flag_mass3_141226_01 84.895 70.463 10114 2979.3 4124.2 0 0 0 0 3010.4 0 0 0 0 0 869 135 851 7776;7777;7778;7779 8540;8541;8542 8542 2 FDLMYAK Unmodified 886.42588 0.42587556 529 P68363 TUBA1B Tubulin alpha-1B chain no no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 60.45 61.853 2 0.042962 8868 Miao_Sh-c_Flag_mass3_141226_03 68.915 39.539 0 0 0 0 0 0 0 0 0 0 0 0 0 870 529 852 7780 8543 8543 1 FDLVPVPTNLYGDFFTGDAYVILK Unmodified 2703.3836 0.38360663 329 P06396;P06396-2;P06396-4;P06396-3;Q5T0I0;Q5T0I1 GSN Gelsolin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 116.24 115.99 3 0.0029146 28751 Miao_Sh-H9_Flag_mass3_141226_01 39.693 35.616 0 0 0 0 0 0 0 0 0 0 0 0 0 + 871 329 853 7781 8544 8544 1 FDPYEHEALFHTPVEGK Unmodified 2014.9425 0.94249171 650 Q9HAV7 GRPEL1 GrpE protein homolog 1, mitochondrial yes yes 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 65.506 67.084 4 0.029052 11240 Miao_Sh-c_proteinG_mass3_141226_02 32.917 24.217 2118.1 0 0 0 0 1762.4 0 0 355.67 0 0 0 0 872 650 854 7782;7783 8545 8545 1 FDQLLAEEK Unmodified 1091.5499 0.5498901 433;434;158 P35579;P35579-2;P35580;P35580-3;P35580-2;F8W6L6;P35580-4;Q7Z406;F2Z2U8;G8JLL9;Q7Z406-6;Q7Z406-2 MYH9;MYH10;MYH14 Myosin-9;Myosin-10;Myosin-14 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 1 3 1 1 2 1 50.774 53.844 2 5.5376E-35 13146 Miao_Sh-H9_proteinG_mass3_141226_02 173.28 117.16 15245 0 0 0 0 362 9535 0 674.95 0 0 0 4673 873 433;434;158 855 7784;7785;7786;7787;7788;7789;7790;7791;7792 8546;8547;8548;8549;8550;8551 8550 6 FDSSLDR Unmodified 838.3821 0.38209649 541 Q02790;F5H1U3 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 98.547 99.459 1 0.057638 23547 Miao_Sh-H9_Flag_mass3_141226_01 43 21.298 11999 0 3035 1663.6 0 643.08 0 4868.6 1788.9 0 0 0 0 874 541 856 7793;7794;7795;7796;7797 8552 8552 0 FDTIYQILLK Unmodified 1252.7067 0.7067251 569 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 95.976 97.33 2 0.023627 23126 Miao_Sh-c_proteinG_mass3_141226_01 63.32 41.575 1817.1 0 0 0 1817.1 0 0 0 0 0 0 0 0 875 569 857 7798 8553 8553 1 FDVNTSAVQVLIEHIGNLDR Unmodified 2239.1597 0.15969512 535 Q00610;Q00610-2 CLTC Clathrin heavy chain 1 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS 1 2 1 1 2 1 1 110.26 106.81 3 1.4497E-09 26685 Miao_Sh-H9_Flag_mass3_141226_01 95.622 72.549 13726 744.33 1888.7 2553.8 1368.3 0 0 2598.2 0 0 2519.9 0 2052.4 876 535 858 7799;7800;7801;7802;7803;7804;7805;7806;7807 8554;8555;8556;8557 8556 3 FEDENFILK Unmodified 1153.5655 0.56554017 522 P62937;F8WE65;C9J5S7;Q567Q0 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 2 1 1 8 1 1 3 3 2 75.291 72.754 2 1.2644E-29 12823 Miao_Sh-c_proteinG_mass3_141226_02 185.6 111.3 132700 6072.1 5705.4 7554.7 14771 15594 14781 9181.4 11907 0 18104 14652 14374 877 522 859 7808;7809;7810;7811;7812;7813;7814;7815;7816;7817;7818;7819;7820;7821;7822;7823;7824;7825;7826;7827;7828;7829;7830;7831 8558;8559;8560;8561;8562;8563;8564;8565;8566;8567;8568;8569;8570;8571;8572;8573;8574;8575;8576;8577;8578;8579;8580;8581;8582;8583;8584;8585;8586;8587;8588;8589;8590;8591;8592;8593;8594;8595;8596;8597;8598 8566 41 FEEHVQSVDIAAFNK Unmodified 1732.842 0.84204938 422 P29692;P29692-2;E9PRY8;P29692-3;E9PQZ1;P29692-4;H0YE72 EEF1D Elongation factor 1-delta yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 1 1 63.677 64.964 3 0.00011872 11404 Miao_Sh-H9_Flag_mass3_141226_01 94.487 71.602 10148 0 0 1592 0 607.86 0 2089.8 0 2813.5 1021.8 2022.8 0 878 422 860 7832;7833;7834;7835;7836;7837;7838 8599;8600 8600 2 FEELNADLFR Unmodified 1252.6088 0.60880197 356 P11142;E9PKE3;P11142-2;E9PNE6;A8K7Q2;E9PN89;P54652 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 3 5 2 1 1 5 1 4 82.469 77.739 2 4.0299E-59 16416 Miao_Sh-H9_Flag_mass3_141226_03 169.21 109.27 90925 7260 1046.6 8398.7 14748 8783.8 5708.5 0 14333 12098 7714 0 10836 879 356 861 7839;7840;7841;7842;7843;7844;7845;7846;7847;7848;7849;7850;7851;7852;7853;7854;7855;7856;7857;7858;7859;7860;7861;7862;7863;7864;7865;7866 8601;8602;8603;8604;8605;8606;8607;8608;8609;8610;8611;8612;8613;8614;8615;8616;8617;8618;8619;8620;8621;8622;8623;8624;8625;8626;8627;8628 8617 27 FEELNMDLFR Unmodified 1312.6122 0.61217279 355 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 88.787 89.105 2 0.00020654 17838 Miao_Sh-c_Flag_mass3_141226_01 126.39 65.951 8017.7 2544.5 0 1896 0 0 0 0 0 3577.2 0 0 0 880 355 862 7867;7868;7869 8629;8630;8631;8632;8633 8629 5 FEELNMDLFR Oxidation (M) 1328.6071 0.60708741 355 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 1 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 75.774 75.072 2 0.022763 15213 Miao_Sh-H9_Flag_mass3_141226_02 73.632 38.187 0 0 0 0 0 0 0 0 0 0 0 0 0 881 355 862 7870 8634 8634 48 1 FEMEQNLR Unmodified 1065.4913 0.49132937 432 P35527;CON__P35527;K7EQQ3 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 52.298 54.002 2 0.015847 12517 Miao_Sh-H9_proteinG_mass3_141226_02 83.206 62.686 3769.8 0 0 668.52 0 0 0 1104.7 0 0 0 1007.2 989.43 + 882 432 863 7871;7872;7873;7874 8635 8635 1 FENAFLSHVVSQHQALLGTIR Unmodified 2366.2495 0.24951318 410 P25705;P25705-2;P25705-3 ATP5A1 ATP synthase subunit alpha, mitochondrial yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 87.596 87.897 4 2.2921E-05 19536 Miao_Sh-H9_Flag_mass3_141226_02 62.303 53.348 12034 0 2171.6 2122.6 0 0 0 0 4308.4 3431.3 0 0 0 883 410 864 7875;7876;7877;7878 8636;8637 8637 0 FENLGIQPPK Unmodified 1141.6132 0.61315906 684 R4GNH3;P17980;E9PKD5;E9PM69;E9PMD8;E9PN50 PSMC3 26S protease regulatory subunit 6A yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 60.198 59.295 2 0.011556 9615 Miao_Sh-H9_Flag_mass3_141226_02 72.321 45.191 0 0 0 0 0 0 0 0 0 0 0 0 0 884 684 865 7879 8638 8638 1 FENYGDK Unmodified 871.3712 0.37119746 643 Q9BUJ2;Q9BUJ2-2;B7Z4B8;Q9BUJ2-4;M0R3F1;M0QYZ0 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 31.975 33.128 2 0.0471 3244 Miao_Sh-c_proteinG_mass3_141226_01 67.169 42.032 0 0 0 0 0 0 0 0 0 0 0 0 0 885 643 866 7880 8639 8639 1 FESPEVAER Unmodified 1062.4982 0.49818889 471 P52272;P52272-2 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 1 2 1 40.636 43.242 2 0.0020116 9767 Miao_Sh-H9_proteinG_mass3_141226_02 96.143 51.062 5237.5 0 0 0 0 0 2733.8 0 307.46 0 0 0 2196.2 886 471 867 7881;7882;7883;7884;7885 8640;8641;8642;8643 8642 4 FFADLLDYIK Unmodified 1243.6489 0.64887587 310 P00492 HPRT1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 1 1 1 109.63 104.55 2 0.017975 24466 Miao_Sh-H9_Flag_mass3_141226_01 68.132 43.238 8429.1 1502.6 0 1136.3 0 0 1730.5 1162.5 0 0 2897.3 0 0 887 310 868 7886;7887;7888;7889;7890;7891 8644;8645;8646;8647 8646 4 FFEVILIDPFHK Unmodified 1503.8126 0.81258715 128 P61313;E7EQV9;E7ENU7 RPL15 60S ribosomal protein L15;Ribosomal protein L15 yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 1 2 2 1 2 2 3 3 5 96.907 93.331 2;3 0.00020217 24242 Miao_Sh-H9_Flag_mass3_141226_02 114.72 91.603 71541 0 0 356.6 11397 10602 244.74 0 7705.2 10298 21634 0 9304.2 888 128 869 7892;7893;7894;7895;7896;7897;7898;7899;7900;7901;7902;7903;7904;7905;7906;7907;7908;7909;7910;7911;7912;7913;7914 8648;8649;8650;8651;8652;8653;8654;8655;8656;8657;8658;8659;8660;8661;8662;8663;8664;8665;8666;8667;8668;8669;8670;8671;8672;8673;8674 8657 27 FFTTPSK Unmodified 826.4225 0.42250475 300 O76021;B4DJ58 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 38.572 41.864 2 0.024613 8719 Miao_Sh-c_proteinG_mass3_141226_03 89.142 62.18 2653 0 0 0 0 169.35 2469.3 0 0 14.389 0 0 0 889 300 870 7915;7916;7917 8675 8675 1 FGAQQDTIEVPEK Unmodified 1460.7147 0.7147236 204 P49736;H0Y8E6 MCM2 DNA replication licensing factor MCM2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 53.694 54.546 2 0.017867 13686 Miao_Sh-H9_proteinG_mass3_141226_02 55.196 35.881 1635.2 0 0 0 0 0 0 0 864.34 0 0 770.91 0 890 204 871 7918;7919 8676 8676 1 FGATLEIVTDK Unmodified 1192.634 0.63395408 510 P62495;B7Z7P8;Q96CG1 ETF1 Eukaryotic peptide chain release factor subunit 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 3 1 9 2 9 5 3 76.506 71.56 2 6.9967E-17 25220 Miao_Sh-c_proteinG_mass3_141226_03 147.62 112.93 36038 1026.2 0 0 8732.6 2285.9 1437.9 0 2039.7 0 9147.4 2096.5 9272.1 891 510 872 7920;7921;7922;7923;7924;7925;7926;7927;7928;7929;7930;7931;7932;7933;7934;7935;7936;7937;7938;7939;7940;7941;7942;7943;7944;7945;7946;7947;7948;7949;7950;7951;7952 8677;8678;8679;8680;8681;8682;8683;8684;8685;8686;8687;8688;8689;8690;8691;8692;8693;8694;8695;8696;8697;8698;8699;8700;8701;8702 8681 23 FGEVVDCTLK Unmodified 1166.5642 0.56415996 41 Q14103;Q14103-3;D6RF44;H0YA96;D6RAF8;H0Y8G5;B4DTC3;Q14103-4;Q14103-2;D6RBQ9;D6RD83 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 2 1 1 2 2 1 2 53.615 55.208 2 5.7334E-06 13820 Miao_Sh-H9_proteinG_mass3_141226_02 131.09 65.81 50036 698.91 727.41 607.16 2399.8 1850.6 6863.8 0 2299.2 0 14295 9755.6 10539 892 41 873 7953;7954;7955;7956;7957;7958;7959;7960;7961;7962;7963;7964;7965;7966 8703;8704;8705;8706;8707;8708;8709;8710;8711 8709 9 FGFIVIDGSGALFGTLQGNTR Unmodified 2169.1219 0.12185306 510 P62495;B7Z7P8;Q96CG1;I3L492 ETF1 Eukaryotic peptide chain release factor subunit 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 2 1 2 3 1 1 114.88 106.63 3 9.2276E-31 38640 Miao_Sh-H9_proteinG_mass3_141226_01 121.77 98.946 0 0 0 0 0 0 0 0 0 0 0 0 0 893 510 874 7967;7968;7969;7970;7971;7972;7973;7974;7975;7976 8712;8713;8714;8715;8716;8717;8718;8719;8720;8721 8718 10 FGFPEGSVELYAEK Unmodified 1571.7508 0.75077476 402 P23396;F2Z2S8;H0YCJ7;E9PPU1;H0YF32 RPS3 40S ribosomal protein S3 yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 2 2 1 3 2 3 3 3 2 2 88.795 85.008 2 0.0011105 30204 Miao_Sh-H9_proteinG_mass3_141226_01 72.898 56.52 36152 957.01 4197.9 0 3419.8 790.99 4507.2 5100.5 2360.6 2012.4 8883.2 3922.6 0 894 402 875 7977;7978;7979;7980;7981;7982;7983;7984;7985;7986;7987;7988;7989;7990;7991;7992;7993;7994;7995;7996;7997;7998;7999;8000 8722;8723;8724;8725;8726;8727;8728;8729;8730;8731;8732;8733 8727 12 FGGSGSQVDSAR Unmodified 1166.5316 0.53161428 559 Q13200;E9PCS3;E7EW34 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 32.613 33.457 2 2.961E-31 3162 Miao_Sh-H9_Flag_mass3_141226_03 172.11 134.77 1297.3 288.84 0 289.74 90.779 77.148 0 0 288.01 262.74 0 0 0 895 559 876 8001;8002;8003;8004;8005;8006 8734;8735;8736;8737 8737 4 FGQGGAGPVGGQGPR Unmodified 1340.6585 0.65854613 399 P23246 SFPQ Splicing factor, proline- and glutamine-rich yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 1 1 38.903 39.978 2 2.2736E-10 8315 Miao_Sh-H9_proteinG_mass3_141226_03 129.77 104.07 20248 0 0 0 394.87 470.6 0 310.7 468.43 827.59 5353.1 6423.6 5999.4 896 399 877 8007;8008;8009;8010;8011;8012;8013;8014;8015 8738;8739;8740;8741;8742;8743;8744 8744 7 FGVEQDVDMVFASFIR Unmodified 1858.8924 0.89237039 368 P14618;P14618-2;P14618-3;H3BTN5;H3BQ34;Q504U3 PKM;PKM2 Pyruvate kinase PKM;Pyruvate kinase yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 2 1 1 1 1 115.65 116.69 2;3 1.1169E-08 27690 Miao_Sh-c_Flag_mass3_141226_02 94.203 49.661 16263 0 0 3189 1890.5 1140.5 0 2340.7 3909.7 3792.8 0 0 0 897 368 878 8016;8017;8018;8019;8020;8021;8022;8023 8745;8746;8747;8748;8749;8750;8751 8745 7 FGVEQDVDMVFASFIR Oxidation (M) 1874.8873 0.88728501 368 P14618;P14618-2;P14618-3;H3BTN5;H3BQ34;Q504U3 PKM;PKM2 Pyruvate kinase PKM;Pyruvate kinase yes no 0 0 1 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 113.43 113.18 3 0.00011991 27800 Miao_Sh-H9_Flag_mass3_141226_01 89.506 73.962 2864.8 0 0 0 0 0 0 1293.8 0 1571 0 0 0 898 368 878 8024;8025;8026;8027 8752;8753;8754;8755 8753 50 4 FGYQFTQQGPR Unmodified 1327.6309 0.63093439 657 Q9NYL9;H0YKU1;H0YNJ8 TMOD3 Tropomodulin-3 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 2 1 1 1 2 1 1 1 1 56.836 58.351 2 7.9407E-10 15890 Miao_Sh-H9_proteinG_mass3_141226_01 145.91 110.62 25258 0 631.8 1012.7 0 2261.5 5303.6 514.8 3091.8 1050.6 5039.1 6351.6 0 899 657 879 8028;8029;8030;8031;8032;8033;8034;8035;8036;8037;8038 8756;8757;8758;8759;8760;8761;8762 8761 7 FGYVDFESAEDLEK Unmodified 1647.7304 0.73043325 389 P19338 NCL Nucleolin yes yes 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 2 1 3 3 1 3 4 3 1 88.331 83.518 2 3.3042E-12 16689 Miao_Sh-H9_Flag_mass3_141226_01 141.75 111.18 31528 675.3 1018.2 0 827.64 0 5484.4 7751.1 7863.5 5370.5 908.9 0 1628.5 900 389 880 8039;8040;8041;8042;8043;8044;8045;8046;8047;8048;8049;8050;8051;8052;8053;8054;8055;8056;8057;8058;8059;8060;8061;8062 8763;8764;8765;8766;8767;8768;8769;8770;8771;8772;8773;8774;8775;8776;8777;8778;8779;8780;8781 8771 19 FHFSQSLTVIHDFLFSLK Unmodified 2165.131 0.13096118 630 Q96CS3 FAF2 FAS-associated factor 2 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 2 2 1 1 1 1 110.92 108.97 3;4 6.3217E-07 25254 Miao_Sh-c_Flag_mass3_141226_01 90.872 69.832 13648 1045 5645.8 3090.4 802.54 0 0 630.58 0 0 1329.7 1103.9 0 901 630 881 8063;8064;8065;8066;8067;8068;8069;8070;8071 8782;8783;8784;8785;8786 8782 5 FHTEALTALLSDDSK Unmodified 1646.8152 0.81516593 510 P62495;B7Z7P8;Q96CG1;I3L492;D6RJE8 ETF1 Eukaryotic peptide chain release factor subunit 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 2 3 4 2 1 1 1 1 83.368 80.737 2;3 1.0833E-29 33243 Miao_Sh-H9_proteinG_mass3_141226_01 166.03 131.28 62132 0 0 0 14955 13757 8425.3 7126.2 0 2648.8 8671.2 526.95 6020.9 902 510 882 8072;8073;8074;8075;8076;8077;8078;8079;8080;8081;8082;8083;8084;8085;8086 8787;8788;8789;8790;8791;8792;8793;8794;8795;8796;8797;8798;8799;8800;8801 8796 15 FHVDISLTDFIQK Unmodified 1561.814 0.81404372 575 Q15046;Q15046-2;H3BVA8 KARS Lysine--tRNA ligase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 104.58 100.51 3 0.00041877 36616 Miao_Sh-H9_proteinG_mass3_141226_01 69.578 51.505 12730 744.38 0 0 0 0 0 0 0 1561.1 10425 0 0 903 575 883 8087;8088;8089 8802 8802 0 FIDTTSK Unmodified 810.41233 0.41233399 443;628 Q92901;P39023;G5E9G0 RPL3L;RPL3 60S ribosomal protein L3-like;60S ribosomal protein L3 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 32.974 32.021 2 0.040393 3501 Miao_Sh-H9_Flag_mass3_141226_01 69.998 69.998 0 0 0 0 0 0 0 0 0 0 0 0 0 904 628;443 884 8090 8803 8803 1 FIEIAAR Unmodified 818.46504 0.46503826 536 Q00839;Q00839-2 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 2 1 1 2 2 3 5 4 58.362 56.986 2 8.0416E-07 12361 Miao_Sh-H9_proteinG_mass3_141226_02 134.12 71.41 50781 1769.1 1364.4 1213.8 1353.5 1735 11631 638.8 0 0 15201 7394.6 8479.3 905 536 885 8091;8092;8093;8094;8095;8096;8097;8098;8099;8100;8101;8102;8103;8104;8105;8106;8107;8108;8109;8110;8111;8112 8804;8805;8806;8807;8808;8809;8810;8811;8812;8813;8814;8815;8816;8817;8818;8819;8820;8821;8822;8823;8824;8825;8826;8827;8828 8820 25 FIIPNVVK Unmodified 928.57459 0.57458871 309 P00338;P00338-3;P00338-2;P00338-5;F5GXY2;F5GYU2 LDHA L-lactate dehydrogenase A chain yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 1 69.841 71.307 2 0.023365 20046 Miao_Sh-H9_proteinG_mass3_141226_03 78.324 17.564 35399 2772.5 0 0 4781.7 5871.6 7451.2 2936.3 3845.6 0 3808.7 0 3931.7 906 309 886 8113;8114;8115;8116;8117;8118;8119;8120 8829;8830;8831;8832 8832 4 FIIPQIVK Unmodified 956.60589 0.60588884 336 P07195;A8MW50;C9J7H8 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 1 1 77.67 75.542 2 0.0092759 15925 Miao_Sh-c_proteinG_mass3_141226_01 91.9 42.477 31555 0 145.17 238.48 6522.6 4335.7 2633.4 0 4733.4 4435.5 5029.7 3481.1 0 907 336 887 8121;8122;8123;8124;8125;8126;8127;8128;8129 8833;8834;8835;8836 8833 4 FILPVNEGK Unmodified 1015.5702 0.57023162 678 Q9Y3A5 SBDS Ribosome maturation protein SBDS yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 61.945 63.809 2 0.002263 15245 Miao_Sh-c_proteinG_mass3_141226_03 96.948 42.98 6262.7 0 753.6 736.74 871.14 0 1807.1 0 0 0 2094.1 0 0 908 678 888 8130;8131;8132;8133;8134;8135;8136 8837;8838;8839;8840 8837 4 FLDDLGNAK Unmodified 991.49746 0.4974606 306 O95816;B4DXE2;A2A296 BAG2 BAG family molecular chaperone regulator 2 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 1 54.71 54.91 2 4.7396E-07 6668 Miao_Sh-c_Flag_mass3_141226_03 141.48 73.257 26968 4272.4 4205.1 4050.7 0 0 0 0 7539 6900.5 0 0 0 909 306 889 8137;8138;8139;8140;8141;8142;8143 8841;8842;8843;8844;8845;8846;8847 8842 7 FLDGIYVSEK Unmodified 1169.5968 0.5968403 117 P32969;D6RAN4;H0Y9V9;H0Y9R4 RPL9 60S ribosomal protein L9 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 2 1 2 1 5 1 1 2 4 4 2 79.087 72.324 2 5.0306E-06 26621 Miao_Sh-c_proteinG_mass3_141226_03 132.25 90.059 54140 4273.8 3629.6 2988.2 0 7024.4 3095.7 7002 0 0 14476 3237.4 8412.9 910 117 890 8144;8145;8146;8147;8148;8149;8150;8151;8152;8153;8154;8155;8156;8157;8158;8159;8160;8161;8162;8163;8164;8165;8166;8167;8168;8169 8848;8849;8850;8851;8852;8853;8854;8855;8856;8857;8858;8859;8860;8861;8862;8863;8864;8865;8866;8867;8868 8855 19 FLEGELIHDLLTIFVSAK Unmodified 2044.1245 0.12447882 54 Q7L2H7;J3KNJ2;H0YCQ8;B4E2Q4 EIF3M Eukaryotic translation initiation factor 3 subunit M yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 122.21 122.73 3 8.1547E-07 30267 Miao_Sh-c_Flag_mass3_141226_02 91.401 55.108 7828.4 0 3993.3 3835.2 0 0 0 0 0 0 0 0 0 911 54 891 8170;8171 8869;8870 8869 2 FLEQQNK Unmodified 905.46068 0.46068117 98;105;346;100 P02538;CON__P02538;P48668;CON__P04259;CON__P48668;O95678;F8W0C6;CON__O95678;Q01546;CON__Q8VED5;P12035;Q5XKE5;CON__P07744;CON__Q5XKE5;J3QST3;CON__P12035;CON__Q01546;Q8N1N4;F8VRG4;CON__Q8N1N4-2;CON__Q7RTT2;Q8N1N4-2;O43790;Q14533;P78386;P78385;U3KPR1;B4DIR1;K7ELP4;K7EJU1;K7EKH9;CON__Q61726;CON__O43790;CON__Q6NT21;CON__P78385;CON__Q14533;CON__P78386;P05787;CON__P05787;P05787-2;CON__H-INV:HIT000292931;F8VUG2;F8W1U3;P08729;Q9NSB2;CON__Q9DCV7;CON__Q3KNV1;CON__P08729;CON__Q9NSB2;CON__Q6ISB0;P13647;CON__P13647;P08670;B0YJC4;P14136;P14136-2;P14136-3 KRT6A;KRT6C;KRT75;KRT5;KRT76;KRT3;KRT79;KRT78;KRT8;KRT86;KRT81;KRT85;KRT83;GFAP;KRT7;KRT84;VIM Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 79;Keratin, type II cytoskeletal 78;Keratin, type II cuticular Hb6;Keratin, type II cuticular Hb1;Keratin, type II cuticular Hb5;Keratin, type II cuticular Hb3;Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 7;Keratin, type II cuticular Hb4;Keratin, type II cytoskeletal 5;Vimentin;Glial fibrillary acidic protein no no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 1 2 1 1 1 1 2 1 1 1 31.041 31.954 2 0.014964 6007 Miao_Sh-H9_proteinG_mass3_141226_02 97.602 16.221 12219 479.8 433.35 485.47 578.98 615.27 3271.6 395.89 579.5 456.45 2464.2 2458.1 0 + 912 98;100;105;346 892 8172;8173;8174;8175;8176;8177;8178;8179;8180;8181;8182;8183;8184;8185;8186 8871;8872;8873;8874;8875;8876;8877;8878 8877 8 FLEQQNQVLQTK Unmodified 1474.778 0.77799256 314;108 P04264;CON__P04264;P35908;CON__P35908;CON__Q6NXH9;Q7Z794;CON__Q9R0H5;CON__Q7Z794 KRT1;KRT2;KRT77 Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 1b no no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 2 2 1 1 3 2 2 3 51.301 53.492 2;3 1.0909E-230 12367 Miao_Sh-H9_proteinG_mass3_141226_03 284.67 203.96 589410 849.71 841.99 1756.5 38086 24814 129620 6285.2 11502 0 151580 125530 98540 + 913 314;108 893 8187;8188;8189;8190;8191;8192;8193;8194;8195;8196;8197;8198;8199;8200;8201;8202;8203;8204;8205;8206;8207 8879;8880;8881;8882;8883;8884;8885;8886;8887;8888;8889;8890;8891;8892;8893;8894;8895;8896;8897;8898;8899;8900;8901;8902;8903;8904;8905;8906;8907;8908;8909;8910;8911;8912;8913;8914;8915;8916;8917;8918;8919;8920;8921;8922;8923;8924 8915 46 FLESVEGNQNYPLLLLTLLEK Unmodified 2432.3203 0.32027809 482 P55060;P55060-4;P55060-3;P55060-2 CSE1L Exportin-2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 113.18 114.23 3 0.00028135 30695 Miao_Sh-H9_Flag_mass3_141226_02 55.631 50.24 6441.2 477.73 0 0 2228.2 618.34 0 0 2603.2 513.78 0 0 0 914 482 894 8208;8209;8210;8211;8212 8925 8925 1 FLETVELQISLK Unmodified 1418.8021 0.80208205 519 P62906 RPL10A 60S ribosomal protein L10a yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 3 3 3 3 10 3 5 4 3 3 7 96.544 92.004 2;3 1.3246E-99 34363 Miao_Sh-H9_proteinG_mass3_141226_02 225.63 151.46 142570 656.24 978.45 2448.9 6526.2 3949.5 20572 482.65 6671.6 570.76 22337 39251 38122 915 519 895 8213;8214;8215;8216;8217;8218;8219;8220;8221;8222;8223;8224;8225;8226;8227;8228;8229;8230;8231;8232;8233;8234;8235;8236;8237;8238;8239;8240;8241;8242;8243;8244;8245;8246;8247;8248;8249;8250;8251;8252;8253;8254;8255;8256;8257;8258;8259;8260;8261;8262;8263 8926;8927;8928;8929;8930;8931;8932;8933;8934;8935;8936;8937;8938;8939;8940;8941;8942;8943;8944;8945;8946;8947;8948;8949;8950;8951;8952;8953;8954;8955;8956;8957;8958;8959;8960;8961;8962;8963;8964;8965;8966;8967;8968;8969;8970;8971;8972;8973;8974;8975;8976;8977;8978;8979;8980;8981;8982;8983;8984;8985;8986 8964 60 FLFSLFGQK Unmodified 1085.591 0.59096706 8 Q13155;A8MU58;F8W950 AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 95.31 95.561 2 0.0022508 21537 Miao_Sh-H9_Flag_mass3_141226_01 95.358 38.181 0 0 0 0 0 0 0 0 0 0 0 0 0 916 8 896 8264;8265 8987;8988 8988 2 FLILPDMLK Unmodified 1088.6304 0.63038903 32 P62318;B4DJP7 SNRPD3 Small nuclear ribonucleoprotein Sm D3 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 95.967 94.446 2 0.018294 19457 Miao_Sh-c_Flag_mass3_141226_01 71.451 36.155 3129.5 1038.1 0 0 0 1516.9 0 0 0 0 0 574.52 0 917 32 897 8266;8267;8268;8269 8989;8990 8989 2 FLIPNASQAESK Unmodified 1303.6772 0.67721588 523 P63104;E7EX29;B0AZS6;P63104-2;E7ESK7 YWHAZ 14-3-3 protein zeta/delta yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 3 1 2 2 1 55.849 58.255 2 0.0010586 14257 Miao_Sh-c_proteinG_mass3_141226_03 87.719 38.738 15273 1845.9 0 1194.9 0 2603.5 370.26 0 0 3319.6 0 0 5938.9 918 523 898 8270;8271;8272;8273;8274;8275;8276;8277;8278;8279;8280;8281;8282 8991;8992;8993;8994;8995;8996;8997;8998;8999;9000;9001;9002 8996 12 FLPLFDR Unmodified 906.49634 0.49633839 67 P61604;B8ZZL8;S4R3N1 HSPE1;HSPE1-MOB4 10 kDa heat shock protein, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 76.849 77.835 2 0.024218 16415 Miao_Sh-H9_Flag_mass3_141226_02 77.058 17.417 4397.6 1623 0 1036.7 1737.9 0 0 0 0 0 0 0 0 919 67 899 8283;8284;8285;8286 9003;9004 9004 2 FLQEFYQDDELGK Unmodified 1630.7515 0.75150304 430 P33993;P33993-2 MCM7 DNA replication licensing factor MCM7 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 73.865 75.219 2 3.3041E-09 14931 Miao_Sh-c_proteinG_mass3_141226_01 95.264 60.569 1473.3 0 0 0 1473.3 0 0 0 0 0 0 0 0 920 430 900 8287;8288 9005;9006 9005 1 FLQFVTGTSK Unmodified 1126.6023 0.60226003 600 Q7Z6Z7;Q7Z6Z7-2;Q7Z6Z7-3;H0Y5W0;H0Y659 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 2 1 1 1 66.733 65.73 2 0.013195 11806 Miao_Sh-H9_Flag_mass3_141226_03 72.2 31.849 5314 0 0 633.09 0 0 748.63 0 1268.5 2663.7 0 0 0 921 600 901 8289;8290;8291;8292;8293 9007;9008 9008 2 FLSNGHVTIPGQQDK Unmodified 1639.8318 0.83181904 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 5 4 1 1 3 6 4 61.071 59.2 2;3 1.1476E-38 7280 Miao_Sh-H9_Flag_mass3_141226_01 172.82 140.5 203810 0 6277.9 6688 12864 1295.7 10922 14017 12817 0 44000 44465 50466 922 433 902 8294;8295;8296;8297;8298;8299;8300;8301;8302;8303;8304;8305;8306;8307;8308;8309;8310;8311;8312;8313;8314;8315;8316;8317;8318;8319;8320 9009;9010;9011;9012;9013;9014;9015;9016;9017;9018;9019;9020;9021;9022;9023;9024;9025;9026;9027;9028;9029;9030;9031;9032;9033;9034;9035;9036;9037;9038;9039 9020 31 FLSNGYIPIPGQQDK Unmodified 1675.857 0.85697116 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 3 1 2 1 1 1 3 6 4 76.307 74.953 2;3 7.9534E-09 20971 Miao_Sh-H9_proteinG_mass3_141226_03 112.63 63.609 49746 1290.1 2214.7 2199.9 5218.3 435.36 7803.5 384.2 1240.2 2831.7 3621.8 14876 7630.3 923 434 903 8321;8322;8323;8324;8325;8326;8327;8328;8329;8330;8331;8332;8333;8334;8335;8336;8337;8338;8339;8340;8341;8342;8343;8344;8345;8346;8347;8348 9040;9041;9042;9043;9044;9045;9046;9047;9048;9049;9050;9051;9052;9053;9054;9055;9056;9057;9058;9059;9060;9061;9062 9060 22 FLTWILNR Unmodified 1061.6022 0.60220045 284 O43776;B4DN60 NARS Asparagine--tRNA ligase, cytoplasmic yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 2 1 2 2 87.563 87.592 2 3.0781E-07 19784 Miao_Sh-H9_Flag_mass3_141226_02 130.27 53.425 11410 2829.8 0 0 2940.6 0 0 2876.3 1167.4 1596.4 0 0 0 924 284 904 8349;8350;8351;8352;8353;8354;8355;8356;8357;8358;8359 9063;9064;9065;9066;9067;9068;9069;9070;9071;9072 9071 10 FLVHNVK Unmodified 855.49667 0.49667274 181 P62910;F8W727;D3YTB1 RPL32 60S ribosomal protein L32 yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 35.506 36.283 2 0.023475 3534 Miao_Sh-c_proteinG_mass3_141226_01 78.616 23.111 1009.3 0 467.09 542.16 0 0 0 0 0 0 0 0 0 925 181 905 8360;8361;8362 9073;9074 9074 2 FLVLDEADGLLSQGYSDFINR Unmodified 2371.1696 0.16959111 622 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 110.75 93.555 3 1.9873E-08 35017 Miao_Sh-H9_proteinG_mass3_141226_03 70.986 58.096 0 0 0 0 0 0 0 0 0 0 0 0 0 926 622 906 8363 9075 9075 1 FNALFAQGNYSEAAK Unmodified 1629.7787 0.77872084 535 Q00610;Q00610-2 CLTC Clathrin heavy chain 1 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 1 1 65.293 65.716 2;3 0.00032443 12376 Miao_Sh-H9_Flag_mass3_141226_02 73.758 48.563 10907 0 765.7 1294.9 0 0 0 912.89 3024.8 1406.4 2383.3 0 1119.3 927 535 907 8364;8365;8366;8367;8368;8369;8370;8371 9076;9077 9077 1 FNASQLITQR Unmodified 1176.6251 0.62512073 161 Q99623;F5GY37;J3KPX7;Q99623-2;F5H3X6;F5GWA7 PHB2 Prohibitin-2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 62.343 62.794 2 0.047945 17360 Miao_Sh-H9_proteinG_mass3_141226_01 50.354 17.265 0 0 0 0 0 0 0 0 0 0 0 0 0 928 161 908 8372 9078 9078 1 FNDEHIPDSPFVVPVASLSDDAR Unmodified 2526.2027 0.20268215 570 Q14315;Q14315-2 FLNC Filamin-C yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 87.861 87.811 3 0.0091683 19605 Miao_Sh-H9_Flag_mass3_141226_03 36.217 27.555 0 0 0 0 0 0 0 0 0 0 0 0 0 929 570 909 8373;8374 9079;9080 9080 2 FNPFVTSDR Unmodified 1081.5193 0.51925868 238 P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;Q9UNX3;J3KTJ8;E5RIT6;J3KSS0;E5RHH1 RPL26;KRBA2;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 3 1 9 1 1 1 4 3 5 64.037 63.288 2 4.2203E-52 9826 Miao_Sh-H9_Flag_mass3_141226_03 208.11 142.86 184050 128.45 9993.3 9487.7 536.66 15424 33321 26285 12638 14792 21314 28761 11372 930 238 910 8375;8376;8377;8378;8379;8380;8381;8382;8383;8384;8385;8386;8387;8388;8389;8390;8391;8392;8393;8394;8395;8396;8397;8398;8399;8400;8401;8402;8403;8404;8405 9081;9082;9083;9084;9085;9086;9087;9088;9089;9090;9091;9092;9093;9094;9095;9096;9097;9098;9099;9100;9101;9102;9103;9104;9105;9106;9107;9108;9109;9110;9111;9112;9113 9097 33 FNVWDTAGQEK Unmodified 1293.599 0.59896556 58 P62826;B5MDF5;J3KQE5;F5H018;H0YFC6 RAN GTP-binding nuclear protein Ran yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching 2 1 1 1 2 1 1 1 1 57.69 59.047 2 0.011322 16719 Miao_Sh-H9_proteinG_mass3_141226_02 69.229 31.261 8783.8 0 161.57 188.5 3027.3 363.54 0 0 771.15 499.41 883.76 2543.5 345.18 931 58 911 8406;8407;8408;8409;8410;8411;8412;8413;8414;8415;8416 9114;9115;9116;9117 9117 4 FPDEDEILEK Unmodified 1233.5765 0.57649879 390 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 1 1 63.256 65.175 2 0.01399 11258 Miao_Sh-H9_Flag_mass3_141226_01 71.524 46.286 11392 948.64 0 0 0 991.61 2639.8 1939.3 562.07 0 0 2134.4 2176.4 932 390 912 8417;8418;8419;8420;8421;8422;8423 9118;9119 9119 2 FPGQLNADLR Unmodified 1129.588 0.58800695 338;530;566;315;642;564 P07437;Q5JP53;Q5ST81;Q3ZCM7;G3V2A3;F5H0I4;Q5SQY0;I3L2F9;A6NNZ2;Q9H4B7;CON__ENSEMBL:ENSBTAP00000025008;P68371;M0R2D3;Q9BVA1;Q13885;P04350;Q9BUF5;K7ESM5;Q13509;Q13509-2 TUBB;TUBB8;TUBB3;TUBB1;TUBB4B;TUBB4A;TUBB2B;TUBB2A;TUBB6 Tubulin beta chain;Tubulin beta-8 chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-4B chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-4A chain;Tubulin beta-6 chain;Tubulin beta-3 chain no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 2 4 3 3 2 5 4 3 1 58.518 59.279 2 2.3106E-57 9288 Miao_Sh-H9_Flag_mass3_141226_01 187.16 134.67 72667 2596.5 3957.4 6343.7 3707.1 3328.4 0 5440.8 14282 21672 0 11340 0 933 338;530;566;315;642;564 913 8424;8425;8426;8427;8428;8429;8430;8431;8432;8433;8434;8435;8436;8437;8438;8439;8440;8441;8442;8443;8444;8445;8446;8447;8448;8449;8450;8451 9120;9121;9122;9123;9124;9125;9126;9127;9128;9129;9130;9131;9132;9133;9134;9135;9136;9137;9138;9139;9140;9141;9142;9143;9144;9145;9146;9147;9148;9149;9150;9151;9152;9153;9154;9155;9156;9157;9158;9159;9160;9161;9162;9163 9143 44 FPGQLNADLRK Unmodified 1257.683 0.68296996 338;530;566;315;642;564 P07437;Q5JP53;Q5ST81;Q3ZCM7;G3V2A3;F5H0I4;Q5SQY0;I3L2F9;A6NNZ2;Q9H4B7;CON__ENSEMBL:ENSBTAP00000025008;P68371;M0R2D3;Q9BVA1;Q13885;P04350;Q9BUF5;K7ESM5;Q13509;Q13509-2 TUBB;TUBB8;TUBB3;TUBB1;TUBB4B;TUBB4A;TUBB2B;TUBB2A;TUBB6 Tubulin beta chain;Tubulin beta-8 chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-4B chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-4A chain;Tubulin beta-6 chain;Tubulin beta-3 chain no no 0 0 0 0 1 By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS 2 2 2 2 1 2 1 1 1 2 2 55.113 54.536 3 0.015296 28577 Miao_Sh-H9_proteinG_mass3_141226_03 115.57 82.196 23797 1428.8 2045.1 2008.7 1419.7 600.99 0 2353.5 1966.5 2780 971.68 2971.5 5250.5 934 338;530;566;315;642;564 914 8452;8453;8454;8455;8456;8457;8458;8459;8460;8461;8462;8463;8464;8465;8466;8467;8468;8469 9164;9165;9166;9167 9167 2 FPQLDSTSFANSR Unmodified 1468.6947 0.69465686 464 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 1 1 68.112 68.329 2 9.995E-05 12125 Miao_Sh-H9_Flag_mass3_141226_01 106.55 42.447 12153 1711.9 1509.3 3271.1 0 0 0 2553.1 0 1343.1 1764.5 0 0 935 464 915 8470;8471;8472;8473;8474;8475;8476 9168;9169;9170;9171 9170 4 FPSLLTHNENMVAK Unmodified 1599.8079 0.80791248 519 P62906 RPL10A 60S ribosomal protein L10a yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 63.158 65.238 3 0.0090208 10904 Miao_Sh-c_proteinG_mass3_141226_01 50.897 34.956 4139.2 0 513.69 0 1219.7 908.56 0 0 0 0 0 0 1497.2 936 519 916 8477;8478;8479;8480 9172 9172 1 FQIEANFPR Unmodified 1120.5665 0.56654322 630 Q96CS3 FAF2 FAS-associated factor 2 yes yes 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 2 68.635 68.802 2 0.0044524 12742 Miao_Sh-H9_Flag_mass3_141226_01 88.136 41.71 0 0 0 0 0 0 0 0 0 0 0 0 0 937 630 917 8481;8482;8483 9173;9174;9175 9175 3 FQSIVIGCALEDQK Unmodified 1606.8025 0.80249275 306 O95816;B4DXE2 BAG2 BAG family molecular chaperone regulator 2 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 71.648 71.931 2 2.7451E-05 14033 Miao_Sh-H9_Flag_mass3_141226_03 96.673 78.26 0 0 0 0 0 0 0 0 0 0 0 0 0 938 306 918 8484;8485;8486 9176;9177;9178 9178 3 FQSIVIGCALEDQKK Unmodified 1734.8975 0.89745577 306 O95816;B4DXE2 BAG2 BAG family molecular chaperone regulator 2 yes no 0 0 0 0 1 By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 67.388 68.202 3 1.0508E-06 10248 Miao_Sh-c_Flag_mass3_141226_01 91.657 74.994 7688.6 0 1253.3 0 0 895.55 0 0 508 5031.7 0 0 0 939 306 919 8487;8488;8489;8490;8491 9179;9180 9179 2 FQSSHHPTDITSLDQYVER Unmodified 2259.0556 0.055623984 369 P14625 HSP90B1 Endoplasmin yes yes 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 1 60.203 63.929 4 0.00055241 10860 Miao_Sh-c_proteinG_mass3_141226_02 53.453 46.933 2600.9 0 0 0 1019.4 1203.4 378.07 0 0 0 0 0 0 940 369 920 8492;8493;8494 9181 9181 1 FQSVPAQPGQTSPLLQYFGILLDQGQLNK Unmodified 3186.6713 0.67134923 535 Q00610;Q00610-2 CLTC Clathrin heavy chain 1 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 2 116.51 117.05 3 2.6734E-07 30284 Miao_Sh-H9_Flag_mass3_141226_02 50.413 44.96 0 0 0 0 0 0 0 0 0 0 0 0 0 941 535 921 8495;8496;8497;8498 9182;9183;9184;9185 9185 4 FSAEDEALSNIAR Unmodified 1421.6787 0.67867245 10 Q9Y608;Q9Y608-2;A8MXR0;Q9Y608-4;C9JSU1;C9JJC9;C9JC17;C9J321;C9J0U5 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 65.67 67.963 2;3 0.00029844 17995 Miao_Sh-H9_proteinG_mass3_141226_03 92.039 71.251 9975 0 0 690.44 1682 5774.6 0 0 0 0 0 0 1828 942 10 922 8499;8500;8501;8502;8503;8504 9186;9187;9188 9188 3 FSASGELGNGNIK Unmodified 1292.6361 0.63607935 360 P12004 PCNA Proliferating cell nuclear antigen yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 52.384 51.481 2 0.0014494 7123 Miao_Sh-H9_Flag_mass3_141226_02 73.881 36.325 0 0 0 0 0 0 0 0 0 0 0 0 0 943 360 923 8505 9189 9189 1 FSDHVALLSVFQAWDDAR Unmodified 2076.0065 0.0064889465 548 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 102.34 103.8 3 3.2754E-05 25600 Miao_Sh-c_proteinG_mass3_141226_01 68.41 53.441 0 0 0 0 0 0 0 0 0 0 0 0 0 944 548 924 8506 9190 9190 1 FSGNLLVSLLGTWSDTSSGGPAR Unmodified 2321.1652 0.16517443 38 P61619;B4DR61;P61619-3 SEC61A1 Protein transport protein Sec61 subunit alpha isoform 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 114.89 114.54 3 0.0029026 28302 Miao_Sh-H9_Flag_mass3_141226_01 41.446 33.532 0 0 0 0 0 0 0 0 0 0 0 0 0 945 38 925 8507 9191 9191 1 FSGSGSGTDFTLK Unmodified 1302.6092 0.6091959 311 P01617;P01614;P06309;P06310 Ig kappa chain V-II region TEW;Ig kappa chain V-II region Cum;Ig kappa chain V-II region GM607;Ig kappa chain V-II region RPMI 6410 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 2 1 2 1 1 2 2 55.131 56.238 2 9.0944E-25 8406 Miao_Sh-H9_Flag_mass3_141226_02 164.68 123.23 134710 15290 12851 14664 0 601 0 34597 26532 25602 0 0 4576 946 311 926 8508;8509;8510;8511;8512;8513;8514;8515;8516;8517;8518;8519;8520 9192;9193;9194;9195;9196;9197;9198;9199;9200;9201;9202;9203;9204;9205;9206;9207;9208;9209;9210 9202 19 FSPAGPILSIR Unmodified 1156.6604 0.66044361 359 P11940;P11940-2;E7ERJ7;H0YBN4;Q9H361;Q4VXU2;E5RH24;E5RJB9;E5RHG7;Q4VY17;E5RGC4;E5RFD8 PABPC1;PABPC3;PABPC1L Polyadenylate-binding protein 1;Polyadenylate-binding protein 3;Polyadenylate-binding protein 1-like no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS 2 1 2 1 1 1 1 2 1 72.087 72.582 2 0.0033082 12741 Miao_Sh-c_Flag_mass3_141226_03 77.124 53.804 17845 2270.6 1871.5 1780.6 2326.2 0 0 3596.3 1973.7 1701.2 0 0 2324.9 947 359 927 8521;8522;8523;8524;8525;8526;8527;8528;8529;8530;8531;8532 9211;9212;9213;9214;9215;9216;9217;9218 9213 8 FSPLTTNLINLLAENGR Unmodified 1872.0105 0.010511692 462 P48047;H7C0C1 ATP5O ATP synthase subunit O, mitochondrial yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 2 1 112.68 106.76 3 0.0038096 26612 Miao_Sh-c_proteinG_mass3_141226_02 48.907 35.806 4431.6 0 1246.4 0 0 0 0 0 0 0 3185.2 0 0 948 462 928 8533;8534;8535;8536;8537;8538;8539 9219;9220;9221;9222;9223;9224 9220 6 FSPYVFNGGTILAIAGEDFAIVASDTR Unmodified 2830.4178 0.4177603 391 P20618 PSMB1 Proteasome subunit beta type-1 yes yes 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 122.2 122.2 3 0.00020729 29616 Miao_Sh-c_Flag_mass3_141226_01 45.983 38.884 0 0 0 0 0 0 0 0 0 0 0 0 0 949 391 929 8540 9225 9225 1 FSSCGGGGGSFGAGGGFGSR Unmodified 1764.7274 0.72743033 314 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 11 4 2 1 2 9 19 12 64.563 61.625 2;3 2.8756E-82 21335 Miao_Sh-H9_proteinG_mass3_141226_02 186.74 160.45 27925 0 0 0 3586.1 1256 2786.5 2923.5 1224.4 0 8426.6 0 7722.1 + 950 314 930 8541;8542;8543;8544;8545;8546;8547;8548;8549;8550;8551;8552;8553;8554;8555;8556;8557;8558;8559;8560;8561;8562;8563;8564;8565;8566;8567;8568;8569;8570;8571;8572;8573;8574;8575;8576;8577;8578;8579;8580;8581;8582;8583;8584;8585;8586;8587;8588;8589;8590;8591;8592;8593;8594;8595;8596;8597;8598;8599;8600 9226;9227;9228;9229;9230;9231;9232;9233;9234;9235;9236;9237;9238;9239;9240;9241;9242;9243;9244;9245;9246;9247;9248;9249;9250;9251;9252;9253;9254;9255;9256;9257;9258;9259;9260;9261;9262;9263;9264;9265;9266;9267;9268;9269;9270;9271;9272;9273;9274;9275;9276;9277;9278;9279;9280;9281;9282;9283;9284;9285 9253 60 FSSSGGGGGGGR Unmodified 981.42642 0.42642093 432 P35527 KRT9 Keratin, type I cytoskeletal 9 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 25.031 26.183 2 0.0024348 5545 Miao_Sh-H9_proteinG_mass3_141226_01 73.435 39.885 0 0 0 0 0 0 0 0 0 0 0 0 0 + 951 432 931 8601;8602 9286;9287 9286 2 FSSSSGYGGGSSR Unmodified 1234.5214 0.52144352 432 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 31.249 32.372 2 2.8371E-05 6652 Miao_Sh-H9_proteinG_mass3_141226_01 112.42 88.393 4853.8 0 0 0 665.62 0 2284.6 35.99 98.296 0 1769.3 0 0 + 952 432 932 8603;8604;8605;8606;8607;8608;8609 9288;9289;9290;9291;9292;9293 9292 6 FSTETTFLVDK Unmodified 1286.6394 0.63943339 15 P48444;B0YIW6;P48444-2 ARCN1 Coatomer subunit delta yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 66.546 66.496 2 0.0031907 12147 Miao_Sh-H9_Flag_mass3_141226_03 78.903 50.694 0 0 0 0 0 0 0 0 0 0 0 0 0 953 15 933 8610 9294 9294 1 FSVCVLGDQQHCDEAK Unmodified 1891.8193 0.8192818 519 P62906 RPL10A 60S ribosomal protein L10a yes yes 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 55.504 57.016 3 2.8822E-09 8252 Miao_Sh-H9_Flag_mass3_141226_01 104.55 95.267 18847 1096.1 1080.8 0 2525.7 2101.3 0 0 0 0 7231.7 0 4811.7 954 519 934 8611;8612;8613;8614;8615;8616;8617 9295;9296;9297;9298;9299;9300;9301 9298 7 FSVSPVVR Unmodified 889.50215 0.50215205 366 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 1 51.429 54.174 2 0.0052126 11910 Miao_Sh-c_proteinG_mass3_141226_03 101.72 64.163 9213.4 0 0 295.62 0 0 3645.7 0 0 0 3030.7 0 2241.4 955 366 935 8618;8619;8620;8621 9302 9302 1 FSWFVDDVEVNTATTK Unmodified 1857.8785 0.87849447 92;93 CON__ENSEMBL:ENSBTAP00000024462;CON__ENSEMBL:ENSBTAP00000024466 no no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching 1 1 2 1 89.929 88.442 2;3 0.0013664 34515 Miao_Sh-H9_proteinG_mass3_141226_01 63.691 53.686 4138.7 982.49 0 0 0 2612 0 0 0 0 0 544.17 0 + 956 92;93 936 8622;8623;8624;8625;8626 9303;9304;9305;9306 9306 4 FSWFVDDVEVNTATTKPR Unmodified 2111.0324 0.032369346 92;93 CON__ENSEMBL:ENSBTAP00000024462;CON__ENSEMBL:ENSBTAP00000024466 no no 0 0 0 0 1 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching 2 4 1 1 1 1 2 1 1 98.475 91.663 3 2.5376E-24 17275 Miao_Sh-c_proteinG_mass3_141226_01 141.85 126.46 31969 0 0 0 0 13442 605.46 672.92 1159.5 809.43 9497.9 4954.5 826.91 + 957 92;93 937 8627;8628;8629;8630;8631;8632;8633;8634;8635;8636;8637;8638;8639;8640 9307;9308;9309;9310;9311;9312;9313;9314;9315 9308 8 FTASAGIQVVGDDLTVTNPK Unmodified 2032.0477 0.047685059 333 P06733;P06733-2 ENO1 Alpha-enolase yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 4 7 3 1 1 1 5 1 2 2 84.04 79.035 2;3 7.2586E-26 14486 Miao_Sh-c_Flag_mass3_141226_03 126.02 106.44 16520 1376.9 0 754.06 0 3030.6 2964.3 0 1315 0 0 3457.3 3621.4 958 333 938 8641;8642;8643;8644;8645;8646;8647;8648;8649;8650;8651;8652;8653;8654;8655;8656;8657;8658;8659;8660;8661;8662;8663;8664;8665;8666;8667 9316;9317;9318;9319;9320;9321;9322;9323;9324;9325;9326;9327;9328;9329;9330;9331;9332;9333;9334;9335;9336;9337;9338;9339;9340;9341;9342;9343;9344 9320 29 FTDEEVDELYR Unmodified 1414.6252 0.62523989 240 O14950;P19105;J3QRS3 MYL12B;MYL12A Myosin regulatory light chain 12B;Myosin regulatory light chain 12A yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 2 3 5 4 12 3 3 3 11 13 5 69.763 67.689 2;3 0 10324 Miao_Sh-c_Flag_mass3_141226_01 322.92 291.77 2802700 111910 103450 105830 264600 211820 403990 197540 205600 213550 354790 311750 317860 959 240 939 8668;8669;8670;8671;8672;8673;8674;8675;8676;8677;8678;8679;8680;8681;8682;8683;8684;8685;8686;8687;8688;8689;8690;8691;8692;8693;8694;8695;8696;8697;8698;8699;8700;8701;8702;8703;8704;8705;8706;8707;8708;8709;8710;8711;8712;8713;8714;8715;8716;8717;8718;8719;8720;8721;8722;8723;8724;8725;8726;8727;8728;8729;8730;8731;8732;8733;8734;8735 9345;9346;9347;9348;9349;9350;9351;9352;9353;9354;9355;9356;9357;9358;9359;9360;9361;9362;9363;9364;9365;9366;9367;9368;9369;9370;9371;9372;9373;9374;9375;9376;9377;9378;9379;9380;9381;9382;9383;9384;9385;9386;9387;9388;9389;9390;9391;9392;9393;9394;9395;9396;9397;9398;9399;9400;9401;9402;9403;9404;9405;9406;9407;9408;9409;9410;9411;9412;9413;9414;9415;9416;9417;9418;9419;9420;9421;9422;9423;9424;9425;9426;9427;9428;9429;9430;9431;9432;9433;9434;9435;9436;9437;9438;9439;9440;9441;9442;9443;9444;9445;9446;9447;9448;9449;9450;9451;9452;9453;9454;9455;9456;9457;9458;9459;9460;9461;9462;9463;9464;9465;9466;9467;9468;9469;9470;9471;9472;9473;9474;9475;9476;9477;9478;9479;9480;9481;9482;9483;9484;9485;9486;9487;9488 9346 143 FTLPPLVFAAYQLAFR Unmodified 1853.024 0.023976912 635 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 121.82 121.77 3 0.00087146 29978 Miao_Sh-c_Flag_mass3_141226_02 64.244 50.064 1036.2 0 0 0 0 0 0 1036.2 0 0 0 0 0 960 635 940 8736;8737 9489;9490 9489 2 FTQAGSEVSALLGR Unmodified 1434.7467 0.74669243 331 P06576;H0YH81;F8W0P7 ATP5B ATP synthase subunit beta, mitochondrial;ATP synthase subunit beta yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 75.154 62.973 2 0.014085 22227 Miao_Sh-H9_proteinG_mass3_141226_01 54.237 29.384 2089.6 0 0 0 0 0 0 0 0 0 2089.6 0 0 961 331 941 8738 9491 9491 1 FTVDLPK Unmodified 818.4538 0.45380487 510 P62495;B7Z7P8;Q96CG1;I3L492 ETF1 Eukaryotic peptide chain release factor subunit 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 3 57.788 60.134 2 0.0034779 16781 Miao_Sh-H9_proteinG_mass3_141226_01 125.5 83.276 23760 0 690.47 0 0 0 6504.5 0 0 0 8514.8 6019.1 2030.7 962 510 942 8739;8740;8741;8742;8743;8744;8745 9492;9493;9494;9495;9496;9497;9498;9499;9500 9496 9 FTYAGCLSVK Unmodified 1144.5587 0.55868065 268 O00622 CYR61 Protein CYR61 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 58.911 61.103 2 0.0050774 16191 Miao_Sh-H9_proteinG_mass3_141226_01 85.813 65.113 18882 137.94 0 212.21 1881.8 1847.5 1360.5 0 0 0 7037.9 6404.6 0 963 268 943 8746;8747;8748;8749;8750;8751;8752;8753 9501;9502;9503;9504 9502 4 FVADGIFK Unmodified 895.48035 0.48035398 402 P23396;F2Z2S8;H0YCJ7;E9PPU1;E9PL09;P23396-2;E9PQ96;E9PJH4;E9PK82;E9PQX2 RPS3 40S ribosomal protein S3 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 66.191 65.656 2 0.0083528 11756 Miao_Sh-H9_Flag_mass3_141226_03 94.114 36.651 13439 0 0 0 0 0 0 3981.9 4326.8 5130.7 0 0 0 964 402 944 8754;8755;8756 9505;9506 9506 2 FVAELWK Unmodified 891.48544 0.48543935 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 1 66.964 69.203 2 0.019433 12816 Miao_Sh-c_proteinG_mass3_141226_02 89.142 37.796 0 0 0 0 0 0 0 0 0 0 0 0 0 965 434 945 8757;8758;8759 9507;9508;9509 9509 3 FVFDRPLPVSR Unmodified 1331.735 0.73500553 160 P25786;F5GX11;P25786-2;B4DEV8 PSMA1 Proteasome subunit alpha type-1;Proteasome subunit alpha type yes no 0 0 0 0 1 By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 65.147 65.272 3 0.00080416 11451 Miao_Sh-H9_Flag_mass3_141226_03 86.911 53.648 8467.1 0 1977.5 2069.6 0 0 0 0 552.5 3867.5 0 0 0 966 160 946 8760;8761;8762;8763 9510;9511;9512 9512 2 FVIATSTK Unmodified 865.49092 0.49091866 542 Q02878 RPL6 60S ribosomal protein L6 yes yes 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1 1 1 1 42.881 44.853 2 0.00029062 9988 Miao_Sh-H9_proteinG_mass3_141226_03 136.75 100.05 38529 0 1367.6 1575 992.84 965.17 11427 0 1357 1593.9 0 9573.1 9677.4 967 542 947 8764;8765;8766;8767;8768;8769;8770;8771;8772;8773;8774;8775 9513;9514;9515;9516;9517;9518;9519;9520;9521;9522;9523;9524 9524 12 FVNLGIEPPK Unmodified 1112.623 0.62299547 437 P35998;B7Z5E2 PSMC2 26S protease regulatory subunit 7 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 1 2 1 1 2 1 1 1 66.42 67.603 2 0.00040911 12059 Miao_Sh-H9_Flag_mass3_141226_01 121.9 82.936 13359 0 0 0 0 414.54 0 3178.3 0 7153.9 1179.4 1432.8 0 968 437 948 8776;8777;8778;8779;8780;8781;8782;8783;8784;8785;8786;8787 9525;9526;9527;9528;9529;9530;9531;9532;9533;9534;9535;9536 9530 12 FVNVVPTFGK Unmodified 1106.6124 0.61243078 156 P62861;E9PR30 FAU 40S ribosomal protein S30 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 1 1 1 2 1 3 4 3 76.954 74.537 2 1.977E-18 18610 Miao_Sh-c_proteinG_mass3_141226_03 160.98 126.05 612090 41778 42802 40102 51846 54000 63142 0 75295 52501 61877 66463 62282 969 156 949 8788;8789;8790;8791;8792;8793;8794;8795;8796;8797;8798;8799;8800;8801;8802;8803;8804;8805;8806;8807;8808;8809;8810 9537;9538;9539;9540;9541;9542;9543;9544;9545;9546;9547;9548;9549;9550;9551;9552;9553;9554;9555;9556;9557;9558;9559;9560;9561;9562;9563;9564;9565;9566;9567;9568;9569;9570;9571;9572;9573;9574;9575;9576;9577;9578;9579;9580;9581;9582;9583;9584 9550 48 FVPLLPGNR Unmodified 1011.5866 0.58655038 533 P78527;E7EUY0;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 65.338 64.694 2 0.0021927 10028 Miao_Sh-c_Flag_mass3_141226_01 97.798 71.414 5626.2 799.26 0 0 0 811.89 0 1405.2 1449.6 0 0 150.31 1010 970 533 950 8811;8812;8813;8814;8815;8816 9585;9586 9585 2 FVSELWK Unmodified 907.48035 0.48035398 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 1 1 1 1 2 2 1 1 64.193 65.613 2 0.0010646 10377 Miao_Sh-c_Flag_mass3_141226_01 138.85 56.586 121990 7899.1 0 8009 25371 20492 7319.8 13470 16055 14643 0 4160.8 4570.5 971 433 951 8817;8818;8819;8820;8821;8822;8823;8824;8825;8826;8827;8828;8829;8830;8831;8832 9587;9588;9589;9590;9591;9592;9593;9594;9595;9596;9597;9598;9599;9600;9601;9602;9603;9604;9605;9606;9607 9588 21 FWEVISDEHGIDPTGTYHGDSDLQLDR Unmodified 3101.4003 0.40027234 338 P07437;Q5JP53;E9PBJ4 TUBB Tubulin beta chain yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 90.869 86.524 4 1.4978E-27 17113 Miao_Sh-H9_Flag_mass3_141226_02 95.287 42.317 35618 0 0 0 0 0 0 0 12548 14364 8707 0 0 972 338 952 8833;8834;8835 9608;9609;9610;9611;9612;9613 9609 6 FWYFVSQLK Unmodified 1216.6281 0.62808085 258 Q02543;M0R3D6;M0R1A7;M0R117 RPL18A 60S ribosomal protein L18a yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 1 1 1 1 97.218 93.558 2 0.002263 20887 Miao_Sh-H9_Flag_mass3_141226_03 96.948 75.401 55599 0 3467.6 2888.5 8727.9 6501.6 3465.2 7040.1 7373.4 7434.9 8261.8 0 437.92 973 258 953 8836;8837;8838;8839;8840;8841;8842;8843;8844;8845 9614;9615;9616;9617;9618;9619;9620;9621;9622;9623;9624;9625 9624 12 FYEAFSK Unmodified 890.41742 0.41741937 344 P08238 HSP90AB1 Heat shock protein HSP 90-beta yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 50.324 51.176 2 0.028033 12746 Miao_Sh-H9_proteinG_mass3_141226_01 75.213 37.567 0 0 0 0 0 0 0 0 0 0 0 0 0 974 344 954 8846 9626 9626 1 FYEQFSK Unmodified 947.43888 0.43888309 341 P07900;P07900-2;Q86U12 HSP90AA1 Heat shock protein HSP 90-alpha yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 2 44.266 47.725 2 0.019137 11133 Miao_Sh-H9_proteinG_mass3_141226_02 91.9 46.939 6731.9 0 0 0 0 0 1725 0 0 0 2935.2 0 2071.7 975 341 955 8847;8848;8849;8850;8851;8852 9627;9628;9629;9630 9629 4 FYVHNDIFR Unmodified 1209.5931 0.59309232 561 Q13283;E5RIZ6 G3BP1 Ras GTPase-activating protein-binding protein 1 yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 71.267 68.297 3 0.0066362 31606 Miao_Sh-H9_proteinG_mass3_141226_01 71.614 54.374 4396.3 0 0 0 1552.4 0 0 0 448.66 1101.2 1294.1 0 0 976 561 956 8853;8854;8855;8856;8857;8858 9631;9632;9633;9634;9635;9636;9637 9637 7 GAAGRPLELSDFR Unmodified 1387.7208 0.72081203 196 P42167;P42167-2;G5E972;H0YJH7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 61.254 61.488 3 0.016008 9697 Miao_Sh-H9_Flag_mass3_141226_03 50.088 22.606 2286.3 0 0 0 582.68 0 0 0 1553.2 0 150.44 0 0 977 196 957 8859;8860;8861;8862 9638;9639 9639 2 GADFLVTEVENGGSLGSK Unmodified 1778.8687 0.86865806 368 P14618;P14618-2;P14618-3;H3BTN5;H3BQ34 PKM Pyruvate kinase PKM;Pyruvate kinase yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 5 2 4 1 1 2 4 2 5 87.155 81.216 2;3 4.8866E-107 17102 Miao_Sh-H9_Flag_mass3_141226_03 207.95 175.62 83319 858.46 5914.5 5709.3 2661.5 6631.6 8344.1 12504 11855 0 3557 10337 14947 978 368 958 8863;8864;8865;8866;8867;8868;8869;8870;8871;8872;8873;8874;8875;8876;8877;8878;8879;8880;8881;8882;8883;8884;8885;8886;8887;8888;8889;8890;8891;8892 9640;9641;9642;9643;9644;9645;9646;9647;9648;9649;9650;9651;9652;9653;9654;9655;9656;9657;9658;9659;9660;9661;9662;9663;9664;9665;9666;9667;9668;9669;9670;9671;9672;9673;9674;9675 9661 36 GAEAANVTGPDGVPVEGSR Unmodified 1781.8544 0.85440498 381 P16989;P16989-2;P16989-3 YBX3 Y-box-binding protein 3 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 48.83 49.682 2 5.0886E-06 12286 Miao_Sh-H9_proteinG_mass3_141226_01 69.07 47.756 0 0 0 0 0 0 0 0 0 0 0 0 0 979 381 959 8893 9676 9676 1 GAEAANVTGPGGVPVQGSK Unmodified 1694.8588 0.85876208 525 P67809;H0Y449 YBX1 Nuclease-sensitive element-binding protein 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 42.195 44.488 3 9.1075E-08 10724 Miao_Sh-H9_proteinG_mass3_141226_01 75.334 66.935 5137.3 0 0 0 0 0 1950.3 363.76 0 0 2366.4 456.84 0 980 525 960 8894;8895;8896;8897 9677;9678;9679;9680 9678 4 GAFGEVR Unmodified 734.37114 0.37113788 577;676 Q15208;I3L0D0;F5GY51;Q9Y2H1 STK38;STK38L Serine/threonine-protein kinase 38;Serine/threonine-protein kinase 38-like no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 39.102 38.099 2 0.041736 3736 Miao_Sh-H9_Flag_mass3_141226_02 64.803 28.618 0 0 0 0 0 0 0 0 0 0 0 0 0 981 577;676 961 8898 9681 9681 1 GAFGKPQGTVAR Unmodified 1187.6411 0.64110515 182 P27635;H7C123;H7C2C5;F8W7C6;X1WI28;Q96L21 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like yes no 0 0 0 0 1 By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 2 1 1 1 1 2 1 32.072 33.68 2;3 7.2361E-05 6387 Miao_Sh-H9_proteinG_mass3_141226_03 127.83 84.062 19752 252.97 382.28 279.38 33.411 209.6 4551.7 195 257.74 0 6272 4820.4 2497.8 982 182 962 8899;8900;8901;8902;8903;8904;8905;8906;8907;8908;8909;8910;8911;8912;8913 9682;9683;9684;9685;9686;9687;9688;9689;9690;9691;9692;9693;9694 9692 13 GAGLVMK Oxidation (M) 690.37345 0.37344606 290 O75165 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 0 0 1 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 2 1 63.695 65.785 1 0.028499 17071 Miao_Sh-c_proteinG_mass3_141226_03 56.255 13.481 30068 0 480.19 0 615.53 509.26 8375.3 0 0 0 10141 9946.6 0 983 290 963 8914;8915;8916;8917;8918;8919;8920 9695;9696 9695 37 0 GAGTGGLGLAIEGPSEAK Unmodified 1583.8155 0.81550028 570 Q14315;Q14315-2 FLNC Filamin-C yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 64.269 63.918 2 0.035001 10864 Miao_Sh-H9_Flag_mass3_141226_01 36.127 22.118 0 0 0 0 0 0 0 0 0 0 0 0 0 984 570 964 8921 9697 9697 1 GALALEEK Unmodified 829.45453 0.45453316 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 3 2 2 1 1 1 1 1 1 1 1 39.859 41.316 2 9.7896E-08 3776 Miao_Sh-c_proteinG_mass3_141226_02 153.71 47.355 48421 593.27 1483.8 1516.1 1336.3 1094.5 9077.2 0 943.69 937.5 13305 9357.8 8775.3 985 433 965 8922;8923;8924;8925;8926;8927;8928;8929;8930;8931;8932;8933;8934;8935;8936;8937 9698;9699;9700;9701;9702;9703;9704;9705;9706;9707;9708;9709;9710;9711;9712;9713;9714 9703 17 GALQNIIPASTGAAK Unmodified 1410.7831 0.78307794 316 P04406;P04406-2;E7EUT5 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 3 2 2 2 3 2 2 2 5 62.286 62.927 2;3 1.111E-21 16473 Miao_Sh-H9_proteinG_mass3_141226_03 155.56 112.26 220400 8284.5 8189.2 8615.3 13482 13359 23558 16155 21524 19875 40181 23735 23439 986 316 966 8938;8939;8940;8941;8942;8943;8944;8945;8946;8947;8948;8949;8950;8951;8952;8953;8954;8955;8956;8957;8958;8959;8960;8961;8962;8963;8964;8965;8966 9715;9716;9717;9718;9719;9720;9721;9722;9723;9724;9725;9726;9727;9728;9729;9730;9731;9732;9733;9734;9735;9736;9737;9738;9739;9740;9741;9742;9743;9744;9745;9746;9747;9748;9749;9750;9751;9752;9753;9754;9755;9756;9757;9758;9759;9760;9761;9762;9763;9764;9765;9766;9767;9768;9769;9770;9771;9772;9773;9774;9775;9776;9777;9778;9779;9780;9781;9782;9783;9784;9785 9782 71 GALQYLVPILTQTLTK Unmodified 1758.0291 0.029121869 574 Q14974;Q14974-2 KPNB1 Importin subunit beta-1 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 112.94 113.23 3 0.0027409 28818 Miao_Sh-H9_Flag_mass3_141226_02 52.862 42.942 4237.6 0 0 1194 0 0 0 1199.8 1843.8 0 0 0 0 987 574 967 8967;8968;8969;8970 9786;9787;9788 9787 3 GANPVEIR Unmodified 854.46102 0.46101552 354 P10809;E7ESH4;E7EXB4;B7Z712 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 1 1 1 37.107 38.604 2 0.032244 3581 Miao_Sh-c_Flag_mass3_141226_03 73.248 25.4 5629.5 0 0 252.74 40.953 0 1396.2 243.57 241.29 0 1462.4 1215.8 776.56 988 354 968 8971;8972;8973;8974;8975;8976;8977;8978 9789 9789 1 GAPAAATAPAPTAHK Unmodified 1330.6993 0.69934831 623 Q92522 H1FX Histone H1x yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 1 1 1 1 1 3 3 29.361 30.263 2;3 2.714E-13 5672 Miao_Sh-H9_proteinG_mass3_141226_03 133.48 111.7 9852.5 370.5 456.3 15.6 217.1 0 2948 244.02 332.8 325.25 2428.7 2514.3 0 989 623 969 8979;8980;8981;8982;8983;8984;8985;8986;8987;8988;8989;8990;8991;8992;8993;8994 9790;9791;9792;9793;9794;9795;9796;9797;9798;9799;9800;9801;9802;9803 9802 14 GASGSFVVVQK Unmodified 1077.5819 0.58185894 593 Q5SSJ5;X6RGJ2;Q5SWC8;Q5SSJ5-2;Q5SSJ5-3 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 44.388 46.61 2 0.014189 10389 Miao_Sh-H9_proteinG_mass3_141226_03 64.918 33.424 12800 157.39 152.97 0 0 0 2390.9 0 0 0 1853.2 4635.9 3609.6 990 593 970 8995;8996;8997;8998;8999;9000 9804;9805 9805 1 GATQQILDEAER Unmodified 1329.6525 0.6524577 159 P78371;F8VQ14;F5GWF6;P78371-2 CCT2 T-complex protein 1 subunit beta yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 1 1 55.363 56.626 2 0.043293 13633 Miao_Sh-c_proteinG_mass3_141226_03 55.196 31.823 7578.7 1485.3 529.1 0 0 0 1283.2 1628.5 0 2652.6 0 0 0 991 159 971 9001;9002;9003;9004;9005 9806 9806 0 GAVASVTFDDFHK Unmodified 1392.6674 0.66737948 573 Q14764 MVP Major vault protein yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 2 3 6 1 2 2 4 8 12 67.128 65.061 2;3 5.9402E-18 14610 Miao_Sh-c_proteinG_mass3_141226_03 158.34 132.22 322250 1328.3 1262.5 0 38040 38964 73062 226.2 2304.1 2257.5 69969 48571 46264 992 573 972 9006;9007;9008;9009;9010;9011;9012;9013;9014;9015;9016;9017;9018;9019;9020;9021;9022;9023;9024;9025;9026;9027;9028;9029;9030;9031;9032;9033;9034;9035;9036;9037;9038;9039;9040;9041;9042;9043;9044;9045;9046;9047;9048 9807;9808;9809;9810;9811;9812;9813;9814;9815;9816;9817;9818;9819;9820;9821;9822;9823;9824;9825;9826;9827;9828;9829;9830;9831;9832;9833;9834;9835;9836;9837;9838;9839;9840;9841;9842;9843;9844;9845;9846;9847;9848;9849;9850;9851;9852;9853;9854;9855;9856;9857;9858;9859;9860;9861;9862;9863;9864;9865;9866;9867;9868;9869;9870 9820 64 GAVASVTFDDFHK GlyGly (K) 1506.7103 0.71030693 573 Q14764 MVP Major vault protein yes yes 0 1 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 56.838 57.389 3 0.0003952 15279 Miao_Sh-H9_proteinG_mass3_141226_01 77.597 65.538 0 0 0 0 0 0 0 0 0 0 0 0 0 993 573 972 9049 9871 9871 13 1 GAVDGGLSIPHSTK Unmodified 1337.6939 0.69392858 457 P46777;Q5T7N0 RPL5 60S ribosomal protein L5 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 2 1 2 2 1 2 1 47.524 48.913 2;3 0.00029381 10861 Miao_Sh-H9_proteinG_mass3_141226_03 76.01 56.915 23239 253.5 0 483.29 410.44 467.54 842.41 451.1 3079.9 1078.7 4887.7 5439.4 5844.8 994 457 973 9050;9051;9052;9053;9054;9055;9056;9057;9058;9059;9060;9061;9062;9063;9064 9872;9873;9874 9874 3 GAWSNVLR Unmodified 901.477 0.47699993 322;361 P12236;P12235;P05141 SLC25A6;SLC25A4;SLC25A5 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed;ADP/ATP translocase 1;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed no no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 1 1 62.753 59.545 2 3.1572E-05 9786 Miao_Sh-H9_Flag_mass3_141226_02 146.03 90.526 12629 0 0 0 846.57 0 0 2673.9 3431 0 3281.2 0 2396.5 995 361;322 974 9065;9066;9067;9068;9069;9070;9071;9072;9073 9875;9876;9877;9878;9879;9880;9881;9882 9879 8 GCGTVLLSGPR Unmodified 1115.5757 0.5757277 190 Q07020;G3V203;J3QQ67;H0YHA7;F8VWC5;F8VUA6 RPL18 60S ribosomal protein L18 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 49.518 50.37 2 0.035032 12494 Miao_Sh-H9_proteinG_mass3_141226_01 50.354 38.76 0 0 0 0 0 0 0 0 0 0 0 0 0 996 190 975 9074 9883 9883 1 GDATVSYEDPPTAK Unmodified 1449.6624 0.66235368 13 Q01844;H7BY36;C9JGE3;B0QYK0;Q01844-2;Q01844-6;Q01844-3;Q01844-5 EWSR1 RNA-binding protein EWS yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 2 3 4 40.942 43.338 2;3 3.1667E-12 9711 Miao_Sh-H9_proteinG_mass3_141226_02 142.1 91.154 28300 62.498 0 33.241 0 225.66 6534.1 0 0 0 6665.2 6204.7 8574.2 997 13 976 9075;9076;9077;9078;9079;9080;9081;9082;9083;9084;9085;9086;9087 9884;9885;9886;9887;9888;9889;9890;9891;9892;9893;9894;9895 9890 12 GDDLSTAILK Unmodified 1031.5499 0.5498901 483 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 2 1 1 1 1 58.361 59.062 2 4.3098E-06 9392 Miao_Sh-H9_Flag_mass3_141226_01 133.44 76.809 20243 1715.3 2644.7 0 346.76 0 0 4976.4 0 4722.9 3079.6 0 2756.9 998 483 977 9088;9089;9090;9091;9092;9093;9094;9095;9096;9097 9896;9897;9898;9899;9900;9901;9902;9903 9897 8 GDEELDSLIK Unmodified 1117.5503 0.55028404 350 P0C0S5;Q71UI9;C9J0D1;Q71UI9-3;Q71UI9-4;Q71UI9-2;C9J386 H2AFZ;H2AFV Histone H2A.Z;Histone H2A.V;Histone H2A yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 2 1 2 65.894 65.378 2 1.7454E-25 17572 Miao_Sh-H9_proteinG_mass3_141226_03 176.6 111.8 79537 1984.3 1221.4 0 3126 0 25395 0 5461.7 0 16073 12840 13435 999 350 978 9098;9099;9100;9101;9102;9103;9104;9105;9106;9107;9108 9904;9905;9906;9907;9908;9909;9910;9911;9912;9913;9914;9915;9916;9917;9918;9919 9917 16 GDFCIQVGR Unmodified 1050.4917 0.49166372 374 P15531;P15531-2;E7ERL0;J3KPD9;O60361 NME1;NME2;NME2P1 Nucleoside diphosphate kinase A;Putative nucleoside diphosphate kinase no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 56.613 57.956 2 0.035741 15291 Miao_Sh-H9_proteinG_mass3_141226_01 63.076 45.845 4056.1 0 0 0 0 502.81 0 553.52 864.84 0 1829.8 0 305.15 1000 374 979 9109;9110;9111;9112;9113 9920 9920 1 GDIFLVR Unmodified 818.46504 0.46503826 483 P55072;C9JUP7;C9IZA5 VCP Transitional endoplasmic reticulum ATPase yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 1 1 1 66.339 63.577 2 0.004742 10957 Miao_Sh-H9_Flag_mass3_141226_03 117.62 29.271 13795 1431.5 1687.9 1417.3 0 703.66 0 1962.6 2745 2502.9 550.84 0 793.82 1001 483 980 9114;9115;9116;9117;9118;9119;9120;9121;9122 9921;9922;9923;9924;9925;9926;9927;9928;9929 9928 9 GDLGIEIPAEK Unmodified 1140.6027 0.60265396 368 P14618;P14618-2;P14618-3;H3BTN5;Q504U3;P30613;P30613-2 PKM;PKM2;PKLR Pyruvate kinase PKM;Pyruvate kinase;Pyruvate kinase PKLR yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 1 2 62.665 63.567 2 7.4903E-10 16739 Miao_Sh-H9_proteinG_mass3_141226_03 146.16 84.348 67089 4382.8 0 0 3665.2 4011.7 0 9375.7 10733 10455 13322 0 11144 1002 368 981 9123;9124;9125;9126;9127;9128;9129;9130;9131;9132 9930;9931;9932;9933;9934;9935;9936;9937;9938;9939;9940;9941;9942;9943;9944 9943 15 GDLPFVVPR Unmodified 998.55492 0.5549159 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 3 1 1 2 3 2 75.54 73.844 2 9.1925E-11 18811 Miao_Sh-c_proteinG_mass3_141226_03 158.76 94.491 175580 5781.8 0 6079.5 17762 25994 50149 8060.7 0 0 23895 12178 25683 1003 433 982 9133;9134;9135;9136;9137;9138;9139;9140;9141;9142;9143;9144;9145;9146;9147;9148;9149 9945;9946;9947;9948;9949;9950;9951;9952;9953;9954;9955;9956;9957;9958;9959;9960;9961;9962;9963;9964;9965;9966;9967;9968 9949 24 GDNITLLQSVSN Unmodified 1259.6357 0.635745 3 P62304;A6NHK2 SNRPE Small nuclear ribonucleoprotein E yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 3 73.11 71.316 2 0.00094509 19926 Miao_Sh-H9_proteinG_mass3_141226_03 86.756 48.48 5821.1 0 1210.2 0 0 0 427.61 0 792.45 0 0 2722.2 668.67 1004 3 983 9150;9151;9152;9153;9154;9155;9156 9969;9970;9971;9972 9972 4 GDSVIVVLR Unmodified 956.56548 0.56548059 507 P62316;P62316-2;K7EJB5 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 3 1 2 2 2 66.422 64.903 2 7.9405E-12 10095 Miao_Sh-H9_Flag_mass3_141226_02 135.71 87.15 34555 0 2366.2 0 0 0 8806.8 0 628.41 497.3 8833.7 6562.9 6859.5 1005 507 984 9157;9158;9159;9160;9161;9162;9163;9164;9165;9166;9167;9168 9973;9974;9975;9976;9977;9978;9979;9980;9981 9974 9 GDTVLLK Unmodified 744.43815 0.43815481 483 P55072;C9JUP7;C9IZA5;E7EQM8 VCP;DCC Transitional endoplasmic reticulum ATPase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 2 1 1 1 2 1 40.55 41.124 2 0.031126 4289 Miao_Sh-H9_Flag_mass3_141226_03 81.32 22.634 4296.9 98.782 373.92 0 74.701 0 0 397.3 0 315.89 574.35 2461.9 0 1006 483 985 9169;9170;9171;9172;9173;9174;9175;9176;9177 9982;9983;9984 9983 3 GDVAEGDLIEHFSQFGTVEK Unmodified 2177.0277 0.027677899 558 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 0 0 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 87.871 86.527 3 0.00037961 18309 Miao_Sh-c_proteinG_mass3_141226_02 56.304 27.492 11856 1923.8 0 0 430.13 4161.8 0 959.9 0 0 4380.6 0 0 1007 558 986 9178;9179;9180;9181;9182 9985;9986;9987 9986 3 GDVTITNDGATILK Unmodified 1416.746 0.74602373 65 P50991;B7Z9L0 CCT4 T-complex protein 1 subunit delta yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 57.174 60.031 2 0.0061143 15327 Miao_Sh-H9_proteinG_mass3_141226_03 57.788 39.651 0 0 0 0 0 0 0 0 0 0 0 0 0 1008 65 987 9183 9988 9988 1 GDYPLEAVR Unmodified 1018.5084 0.50835964 368 P14618;P14618-2;P14618-3;H3BTN5;Q504U3 PKM;PKM2 Pyruvate kinase PKM;Pyruvate kinase yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 2 3 2 1 1 1 52.739 53.665 2 5.5828E-08 12319 Miao_Sh-c_proteinG_mass3_141226_03 149.27 112.89 61435 2301.2 0 1684.8 1018.1 0 10225 4491.7 6590.6 6407.5 10742 8422.2 9552 1009 368 988 9184;9185;9186;9187;9188;9189;9190;9191;9192;9193;9194;9195;9196;9197;9198 9989;9990;9991;9992;9993;9994;9995;9996;9997;9998;9999;10000;10001;10002;10003;10004;10005 9990 17 GEAIEAILAALEVVSEPFR Unmodified 2013.0783 0.078256906 559 Q13200;E9PCS3;E7EW34;H7C1H2 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching 1 4 2 1 1 1 2 122.98 122.69 2;3 2.1472E-09 30360 Miao_Sh-c_Flag_mass3_141226_02 97.384 80.498 10986 279.23 8262.3 0 0 2354 18.719 0 39.042 32.759 0 0 0 1010 559 989 9199;9200;9201;9202;9203;9204;9205;9206;9207;9208;9209;9210 10006;10007;10008;10009;10010;10011;10012;10013;10014 10008 8 GEATVSFDDPPSAK Unmodified 1419.6518 0.65178899 435 P35637;P35637-2;H3BPE7;Q92804;K7EPT6;Q92804-2 FUS;TAF15 RNA-binding protein FUS;TATA-binding protein-associated factor 2N yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 2 1 1 1 2 48.662 50.622 2 1.3506E-57 11436 Miao_Sh-H9_proteinG_mass3_141226_03 193.51 155.89 82170 0 1231 0 0 1366.3 23997 3256.4 0 3592.9 17062 14411 17253 1011 435 990 9211;9212;9213;9214;9215;9216;9217;9218;9219;9220;9221;9222;9223 10015;10016;10017;10018;10019;10020;10021;10022;10023;10024;10025;10026;10027;10028;10029;10030;10031;10032 10032 18 GEAVLRPGLDAEPELSPEEQR Unmodified 2291.1394 0.13935361 82 Q9BRJ6;C9JQV0 C7orf50 Uncharacterized protein C7orf50 yes no 0 0 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 1 1 1 2 1 2 1 1 1 2 62.739 63.959 3 1.4426E-43 17525 Miao_Sh-H9_proteinG_mass3_141226_01 157.53 137.64 48251 227.73 0 442.04 6662.7 5883.4 0 4869.5 4847.2 0 9321.5 8775.1 7222.3 1012 82 991 9224;9225;9226;9227;9228;9229;9230;9231;9232;9233;9234;9235;9236;9237;9238;9239 10033;10034;10035;10036;10037;10038;10039;10040;10041;10042;10043;10044;10045;10046;10047;10048;10049;10050;10051 10047 19 GEEILSGAQR Unmodified 1058.5356 0.53563702 372 P14868;Q68CR9;H7BZ35 DARS Aspartate--tRNA ligase, cytoplasmic yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 1 1 39.159 40.497 2 0.037816 9302 Miao_Sh-H9_proteinG_mass3_141226_01 58.743 15.446 3353.8 0 107.5 717.39 63.519 405.71 0 0 307.46 0 1233.2 0 518.99 1013 372 992 9240;9241;9242;9243;9244;9245;9246 10052 10052 1 GEGAGQPSTSAQGQPAAPAPQK Unmodified 2033.9766 0.97664538 169 P52926;P52926-2;F5H2U8;F5H2A4;F5H6H0;P52926-3;P52926-6;P52926-4;P52926-5 HMGA2 High mobility group protein HMGI-C yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 4 3 7 32.865 34.06 2;3 1.3926E-13 6806 Miao_Sh-H9_proteinG_mass3_141226_02 89.913 78.012 5047.9 109.08 23.713 0 0 0 0 0 0 0 1750.5 2089.4 1075.2 1014 169 993 9247;9248;9249;9250;9251;9252;9253;9254;9255;9256;9257;9258;9259;9260;9261;9262;9263 10053;10054;10055;10056;10057;10058;10059;10060;10061;10062;10063;10064;10065;10066;10067;10068;10069;10070;10071;10072;10073;10074;10075;10076;10077 10061 25 GEGAGQPSTSAQGQPAAPAPQKR Unmodified 2190.0778 0.077756409 169 P52926;P52926-2;F5H2U8;F5H2A4;F5H6H0;P52926-3;P52926-6;P52926-4;P52926-5 HMGA2 High mobility group protein HMGI-C yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 2 3 1 1 30.713 32.392 3 2.5577E-32 6639 Miao_Sh-H9_proteinG_mass3_141226_01 112.44 99.921 3213.9 0 0 0 0 0 0 0 0 0 0 1619.7 1594.2 1015 169 994 9264;9265;9266;9267;9268;9269;9270 10078;10079;10080;10081;10082;10083;10084 10081 7 GEGPDVDVNLPK Unmodified 1238.6143 0.61428128 550 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 51.395 57.259 2 0.024657 13642 Miao_Sh-c_proteinG_mass3_141226_03 51.092 29.421 0 0 0 0 0 0 0 0 0 0 0 0 0 1016 550 995 9271 10085 10085 1 GELANEVK Unmodified 858.4447 0.44469675 433 P35579 MYH9 Myosin-9 yes yes 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 2 1 1 1 2 1 1 2 31.264 32.317 2 0.0037558 3171 Miao_Sh-c_Flag_mass3_141226_02 111.06 32.948 14607 484.07 1198 0 0 2821.2 2910.7 558.47 1461.2 0 2419.3 87.199 2666.5 1017 433 996 9272;9273;9274;9275;9276;9277;9278;9279;9280;9281;9282;9283 10086;10087;10088;10089;10090;10091;10092;10093;10094 10088 9 GEVFNELVGK Unmodified 1090.5659 0.56587452 327 P05556;P05556-2;P05556-5;P05556-4;P05556-3 ITGB1 Integrin beta-1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 63.987 66.367 2 0.0082941 11234 Miao_Sh-H9_Flag_mass3_141226_02 79.07 55.999 4034 0 0 0 0 0 272.08 0 3761.9 0 0 0 0 1018 327 997 9284;9285 10095 10095 1 GFAFVQYVNER Unmodified 1328.6513 0.65133548 50 P07910;P07910-2;G3V576;G3V4W0;B4DY08;G3V4C1;G3V2Q1;P07910-4;G3V555;G3V575;G3V4M8;G3V5X6;G3V3K6;G3V251;B4DSU6 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 1 5 1 2 1 1 1 1 75.607 76.822 2;3 6.5229E-22 15478 Miao_Sh-c_proteinG_mass3_141226_01 164.65 135.7 35501 3763.5 0 0 13165 14039 0 4533.9 0 0 0 0 0 1019 50 998 9286;9287;9288;9289;9290;9291;9292;9293;9294;9295;9296;9297;9298;9299 10096;10097;10098;10099;10100;10101;10102;10103;10104;10105;10106;10107;10108;10109;10110;10111 10098 16 GFAFVTFDDHDSVDK Unmodified 1698.7526 0.75256567 180 P09651;F8W6I7;P09651-3;P09651-2;F8VZ49;Q32P51;F8VTQ5;H0YH80 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 3 3 1 1 4 13 11 91.762 85.973 2;3 1.0929E-12 34944 Miao_Sh-c_proteinG_mass3_141226_03 137.8 119.66 164000 5142.7 0 2090.2 52383 14091 28512 0 1240.2 3678.5 27002 7518.6 22344 1020 180 999 9300;9301;9302;9303;9304;9305;9306;9307;9308;9309;9310;9311;9312;9313;9314;9315;9316;9317;9318;9319;9320;9321;9322;9323;9324;9325;9326;9327;9328;9329;9330;9331;9332;9333;9334;9335;9336;9337;9338;9339;9340 10112;10113;10114;10115;10116;10117;10118;10119;10120;10121;10122;10123;10124;10125;10126;10127;10128;10129;10130;10131;10132;10133;10134;10135;10136;10137;10138;10139;10140;10141;10142;10143;10144;10145;10146;10147;10148;10149;10150;10151;10152;10153;10154;10155;10156;10157;10158;10159;10160;10161;10162;10163;10164;10165;10166;10167;10168;10169;10170;10171;10172;10173;10174;10175;10176;10177;10178;10179;10180;10181;10182;10183;10184;10185;10186;10187;10188;10189;10190;10191;10192;10193;10194;10195 10132 84 GFAFVTFDDHDTVDK Unmodified 1712.7682 0.76821573 470 P51991;P51991-2 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 1 2 1 3 1 2 6 83.624 79.371 2;3 1.1754E-08 14678 Miao_Sh-c_proteinG_mass3_141226_01 108.58 93.61 17876 0 0 991.02 0 8246.6 0 1841 0 0 1337.6 5460.2 0 1021 470 1000 9341;9342;9343;9344;9345;9346;9347;9348;9349;9350;9351;9352;9353;9354;9355;9356 10196;10197;10198;10199;10200;10201;10202;10203;10204;10205;10206;10207;10208;10209 10197 14 GFAFVTFESPADAK Unmodified 1485.714 0.71399532 201 P38159;H0Y6E7;H3BT71;Q96E39;H3BR27;P38159-3;Q8N7X1;O75526 RBMX;RBMXL1;RBMXL3;RBMXL2 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1;RNA-binding motif protein, X-linked-like-3;RNA-binding motif protein, X-linked-like-2 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 1 1 1 2 3 94.936 88.078 2 1.6603E-31 17667 Miao_Sh-c_proteinG_mass3_141226_01 117.77 96.989 21901 2903 1891.2 0 5718.2 0 4165.8 0 0 0 6204.7 0 1018.2 1022 201 1001 9357;9358;9359;9360;9361;9362;9363;9364;9365;9366;9367;9368;9369;9370 10210;10211;10212;10213;10214;10215;10216;10217;10218;10219;10220;10221;10222;10223;10224;10225 10214 15 GFCFLEYEDHK Unmodified 1443.6129 0.61290107 286;281 O60506-4;O60506-3;O60506;O60506-2;O60506-5;O43390;O43390-2;O43390-4;O43390-3;B4DT28;E7ETM7 SYNCRIP;HNRNPR Heterogeneous nuclear ribonucleoprotein Q;Heterogeneous nuclear ribonucleoprotein R no no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 1 87.262 82.059 3 0.0048526 32327 Miao_Sh-H9_proteinG_mass3_141226_01 70.942 65.843 6316.9 0 0 0 1675.5 773.92 1709.5 575.78 0 0 0 0 1582.2 1023 286;281 1002 9371;9372;9373;9374;9375;9376 10226;10227;10228 10228 3 GFGDGYNGYGGGPGGGNFGGSPGYGGGR Unmodified 2494.0323 0.03226278 397 P22626;P22626-2 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 3 73.608 68.01 2;3 1.0646E-34 18636 Miao_Sh-H9_proteinG_mass3_141226_01 103.14 96.989 5319 0 0 0 1464.5 0 0 0 0 0 0 3854.5 0 1024 397 1003 9377;9378;9379;9380;9381 10229;10230;10231;10232;10233 10231 4 GFGFGQGAGALVHSE Unmodified 1432.6735 0.67352749 154 P21291;E9PP21 CSRP1 Cysteine and glycine-rich protein 1 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 69.235 69.285 2 7.8304E-08 11914 Miao_Sh-c_Flag_mass3_141226_03 91.712 76.7 11688 377.65 0 0 1364.3 3129.4 424.76 0 6391.7 0 0 0 0 1025 154 1004 9382;9383;9384;9385;9386;9387 10234;10235 10234 2 GFGFILFK Unmodified 927.52182 0.52182486 115 Q99729-3;D6R9P3;D6RD18;D6RBZ0;Q99729-2;Q99729;Q99729-4 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 2 3 1 1 101.61 100.27 2 2.1928E-06 21898 Miao_Sh-c_proteinG_mass3_141226_02 150.02 110.8 112690 1161.9 1641.4 1436.4 21868 21459 0 1449.7 3013.3 744.66 35875 24039 0 1026 115 1005 9388;9389;9390;9391;9392;9393;9394;9395;9396;9397;9398;9399;9400;9401 10236;10237;10238;10239;10240;10241;10242;10243;10244;10245;10246;10247;10248;10249;10250;10251;10252 10240 17 GFGFVDFNSEEDAK Unmodified 1560.6733 0.67325272 389 P19338;H7BY16 NCL Nucleolin yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 5 3 3 5 93.127 82.14 2 2.6032E-12 15712 Miao_Sh-c_proteinG_mass3_141226_02 143.56 103.94 36106 0 0 0 7829.5 7586.6 3124.1 0 0 0 10390 0 7175.8 1027 389 1006 9402;9403;9404;9405;9406;9407;9408;9409;9410;9411;9412;9413;9414;9415;9416;9417;9418;9419 10253;10254;10255;10256;10257;10258;10259;10260;10261;10262;10263;10264;10265;10266;10267;10268;10269;10270;10271 10255 18 GFGFVLFK Unmodified 913.50617 0.5061748 41;271 Q14103;Q14103-3;D6RF44;H0YA96;D6RAF8;H0Y8G5;B4DTC3;Q14103-4;Q14103-2;D6RBQ9;O14979;O14979-3;O14979-2 HNRNPD;HNRNPDL Heterogeneous nuclear ribonucleoprotein D0;Heterogeneous nuclear ribonucleoprotein D-like no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 2 1 1 1 1 1 101.65 97.188 2 0.0038225 18436 Miao_Sh-c_Flag_mass3_141226_03 110.63 69.331 56696 3090.7 3702.9 3057.5 8190.7 4713.7 5663.3 0 0 5809.7 9844.6 6652.5 5970.8 1028 41;271 1007 9420;9421;9422;9423;9424;9425;9426;9427;9428;9429;9430;9431;9432 10272;10273;10274;10275;10276;10277;10278;10279;10280;10281;10282;10283;10284;10285;10286;10287;10288;10289;10290 10276 19 GFGFVSFER Unmodified 1044.5029 0.50288033 359 P11940;P11940-2;E7EQV3;E7ERJ7;H0YAR2;Q9H361;H0YAP2 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 2 1 2 1 86.532 83.192 2 2.4365E-05 15666 Miao_Sh-c_proteinG_mass3_141226_01 130.31 102.09 17528 0 2159.6 1500.3 3151.5 3134.8 0 0 3001.8 0 2488.3 2091.4 0 1029 359 1008 9433;9434;9435;9436;9437;9438;9439;9440;9441;9442 10291;10292;10293;10294;10295;10296;10297 10291 7 GFGFVTFDDHDPVDK Unmodified 1694.7577 0.75765105 397 P22626;P22626-2 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 4 1 2 3 4 104.22 94.576 2;3 8.4043E-10 33393 Miao_Sh-H9_proteinG_mass3_141226_01 126.77 100.24 107160 0 0 0 0 23641 11359 0 0 1824.5 29664 20018 20656 1030 397 1009 9443;9444;9445;9446;9447;9448;9449;9450;9451;9452;9453;9454;9455;9456;9457;9458 10298;10299;10300;10301;10302;10303;10304;10305;10306;10307;10308;10309;10310;10311;10312;10313;10314;10315;10316;10317;10318;10319;10320;10321;10322;10323;10324;10325;10326;10327 10308 30 GFGFVTFENIDDAK Unmodified 1558.7304 0.73037367 55 Q14011;K7ELV6;K7ENX8;K7EJV5;K7ELT6;K7EMY9;K7EPM4;K7ER40;K7EQR7;D6W5Y5;B4E2X2 CIRBP Cold-inducible RNA-binding protein yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 3 1 3 94.871 91.295 2 0.00014935 19683 Miao_Sh-c_proteinG_mass3_141226_01 80.632 60.425 9557.5 0 900.66 0 0 3044.5 2580 0 0 2570.4 461.98 0 0 1031 55 1010 9459;9460;9461;9462;9463;9464;9465;9466;9467;9468;9469 10328;10329;10330;10331;10332;10333;10334;10335 10328 8 GFGFVTYATVEEVDAAMNAR Unmodified 2146.9994 0.99935466 180 P09651;F8W6I7;P09651-3;P09651-2;F8VZ49;F8VYN5;F8W646 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 109.35 105.74 3 5.2514E-05 26741 Miao_Sh-c_proteinG_mass3_141226_01 74.732 61.892 6731.7 0 0 0 3036.6 0 0 0 709.2 0 2985.8 0 0 1032 180 1011 9470;9471;9472 10336 10336 0 GFGFVTYATVEEVDAAMNARPHK Unmodified 2509.206 0.20599339 180 P09651;F8W6I7;P09651-3;P09651-2;F8VZ49;F8VYN5;F8W646 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 0 0 0 0 1 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 93.38 94.734 4 2.2129E-07 22162 Miao_Sh-c_proteinG_mass3_141226_01 69.256 61.432 3280.2 0 0 0 3280.2 0 0 0 0 0 0 0 0 1033 180 1012 9473 10337 10337 1 GFGFVYFQNHDAADK Unmodified 1714.774 0.77396981 558 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 98.286 91.97 3 0.012996 33528 Miao_Sh-H9_proteinG_mass3_141226_01 45.614 36.332 3341.1 0 0 0 0 0 0 0 0 1240.2 2100.9 0 0 1034 558 1013 9474;9475 10338 10338 1 GFGGIGGILR Unmodified 945.5396 0.53960019 510 P62495;B7Z7P8;Q96CG1 ETF1 Eukaryotic peptide chain release factor subunit 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 2 1 7 1 2 5 6 80.933 76.656 2 8.1857E-11 32728 Miao_Sh-H9_proteinG_mass3_141226_03 137.84 66.93 51890 0 0 0 9544.9 10503 3844.5 215.87 0 0 13288 8616.3 5877.5 1035 510 1014 9476;9477;9478;9479;9480;9481;9482;9483;9484;9485;9486;9487;9488;9489;9490;9491;9492;9493;9494;9495;9496;9497;9498;9499 10339;10340;10341;10342;10343;10344;10345;10346;10347;10348;10349;10350;10351;10352;10353;10354;10355;10356;10357;10358;10359;10360;10361;10362;10363;10364;10365;10366;10367;10368;10369;10370 10368 32 GFGYAEFEDLDSLLSALSLNEESLGNRR Unmodified 3101.4942 0.49417272 137 P23588;F8W0K0;F8VYE9;F8VSC7;F8VP89;F8VX11;E7EX17 EIF4B Eukaryotic translation initiation factor 4B yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 116.8 117.25 3 0.0090355 30487 Miao_Sh-H9_Flag_mass3_141226_03 34.04 23.141 4606.3 0 0 0 0 0 0 0 0 4606.3 0 0 0 1036 137 1015 9500 10371 10371 0 GFLEFVEDFIQVPR Unmodified 1694.8668 0.86680757 49 P51114;P51114-2;P51114-3;E7EU85;E9PFF5;B4DXZ6 FXR1 Fragile X mental retardation syndrome-related protein 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 119.24 119.84 3 0.00014249 31527 Miao_Sh-c_proteinG_mass3_141226_01 89.46 64.012 9857.6 0 0 3926.8 3247 0 0 0 2577.8 105.98 0 0 0 1037 49 1016 9501;9502;9503;9504 10372;10373 10372 2 GFNEGLWEIDNNPK Unmodified 1631.758 0.7579854 291 O75475;O75475-2;O75475-3 PSIP1 PC4 and SFRS1-interacting protein yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 70.87 66.609 2 0.053834 20552 Miao_Sh-c_proteinG_mass3_141226_03 40.941 33.811 0 0 0 0 0 0 0 0 0 0 0 0 0 1038 291 1017 9505 10374 10374 1 GFPTIYFSPANK Unmodified 1340.6765 0.6764876 197 P30101;G5EA52 PDIA3 Protein disulfide-isomerase A3 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 2 72.841 68.58 2 0.007792 21107 Miao_Sh-c_proteinG_mass3_141226_03 64.121 49.442 0 0 0 0 0 0 0 0 0 0 0 0 0 1039 197 1018 9506;9507 10375;10376 10375 2 GFSLEELR Unmodified 949.4869 0.48689592 414 P26373;P26373-2;J3QSB4 RPL13 60S ribosomal protein L13 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 2 1 1 4 2 3 76.293 74.211 2 5.8468E-48 13249 Miao_Sh-c_proteinG_mass3_141226_02 205.58 133.7 411160 17041 21394 16290 28967 20602 32124 32200 83701 65788 39876 28396 24778 1040 414 1019 9508;9509;9510;9511;9512;9513;9514;9515;9516;9517;9518;9519;9520;9521;9522;9523;9524;9525;9526;9527 10377;10378;10379;10380;10381;10382;10383;10384;10385;10386;10387;10388;10389;10390;10391;10392;10393;10394;10395;10396;10397;10398;10399;10400;10401;10402;10403;10404;10405;10406;10407;10408;10409;10410;10411;10412;10413;10414;10415;10416;10417;10418;10419;10420;10421;10422;10423;10424 10385 48 GFSLLATEDK Unmodified 1079.5499 0.5498901 349 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 61.574 63.98 2 0.0065121 17383 Miao_Sh-H9_proteinG_mass3_141226_02 79.07 45.807 0 0 0 0 0 0 0 0 0 0 0 0 0 1041 349 1020 9528 10425 10425 1 GFSSGSAVVSGGSR Unmodified 1253.6 0.60002819 108 P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal no no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 1 1 1 1 2 2 3 1 38.96 40.965 2 2.1194E-05 8893 Miao_Sh-H9_proteinG_mass3_141226_02 91.812 68.492 8491.4 0 493.52 249.54 50.986 0 1236.8 0 0 0 2015.1 2446.8 1998.8 + 1042 108 1021 9529;9530;9531;9532;9533;9534;9535;9536;9537;9538;9539;9540;9541;9542 10426;10427;10428;10429;10430;10431;10432;10433 10433 8 GFSVVADTPELQR Unmodified 1417.7201 0.72014333 76 Q14847;C9J9W2;Q14847-3;Q14847-2 LASP1 LIM and SH3 domain protein 1 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 1 3 1 1 71.336 69.682 2 8.2872E-05 10523 Miao_Sh-c_Flag_mass3_141226_03 101.33 87.507 5488.6 758.82 1508.4 0 679.22 0 216.99 0 0 996.86 0 1328.3 0 1043 76 1022 9543;9544;9545;9546;9547;9548;9549;9550;9551 10434;10435;10436;10437 10435 4 GFTIPEAFR Unmodified 1036.5342 0.53418046 263 O00299 CLIC1 Chloride intracellular channel protein 1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 2 3 2 104.73 92.25 2 0.0041908 31984 Miao_Sh-c_proteinG_mass3_141226_03 88.177 51.795 9530.1 0 0 0 0 0 3203.3 0 0 0 0 4005.2 2321.6 1044 263 1023 9552;9553;9554;9555;9556;9557;9558 10438;10439;10440;10441;10442;10443;10444;10445;10446 10439 9 GFTPAQFQAALDEYEELNVWQVNASR Unmodified 2982.4148 0.41480019 430 P33993;P33993-3;P33993-2 MCM7 DNA replication licensing factor MCM7 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 109.55 110.55 3 0.014746 25275 Miao_Sh-c_Flag_mass3_141226_03 30.013 26.302 0 0 0 0 0 0 0 0 0 0 0 0 0 1045 430 1024 9559 10447 10447 1 GFVEIQTPK Unmodified 1017.5495 0.54949617 372 P14868;Q68CR9 DARS Aspartate--tRNA ligase, cytoplasmic yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 53.941 56.448 2 0.0097276 14389 Miao_Sh-H9_proteinG_mass3_141226_02 80.231 44.579 0 0 0 0 0 0 0 0 0 0 0 0 0 1046 372 1025 9560 10448 10448 1 GFVFITFK Unmodified 957.53239 0.53238955 115 Q99729-3;D6R9P3;D6RD18;D6RBZ0;Q99729-2;Q99729;Q99729-4 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1 1 1 2 97.187 93.394 2 0.00016771 38884 Miao_Sh-H9_proteinG_mass3_141226_03 117.4 88.023 116620 1319.4 1304.3 1158.5 21147 13016 10059 1688.5 3151.5 2068.3 27900 21196 12608 1047 115 1026 9561;9562;9563;9564;9565;9566;9567;9568;9569;9570;9571;9572;9573 10449;10450;10451;10452;10453;10454;10455;10456;10457;10458;10459;10460;10461;10462;10463;10464;10465;10466;10467;10468 10468 20 GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unmodified 2382.9446 0.94456998 314 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 2 7 37.815 39.456 2;3 7.9116E-51 8023 Miao_Sh-H9_proteinG_mass3_141226_03 109.69 85.939 26034 0 0 166.65 0 0 0 0 0 0 10822 15046 0 + 1048 314 1027 9574;9575;9576;9577;9578;9579;9580;9581;9582;9583;9584;9585 10469;10470;10471;10472;10473;10474;10475;10476;10477;10478;10479;10480;10481;10482;10483;10484 10482 16 GGGGNFGPGPGSNFR Unmodified 1376.6222 0.62216062 397 P22626;P22626-2 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 2 2 2 1 3 2 46.812 49.348 2;3 8.8765E-62 12007 Miao_Sh-H9_proteinG_mass3_141226_02 190.06 156.9 148990 0 228.44 88.113 6874.9 850.88 34390 1434 0 0 34563 34873 35690 1049 397 1028 9586;9587;9588;9589;9590;9591;9592;9593;9594;9595;9596;9597;9598;9599;9600 10485;10486;10487;10488;10489;10490;10491;10492;10493;10494;10495;10496;10497;10498;10499;10500 10493 16 GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unmodified 2704.1538 0.15383448 432 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 3 2 1 3 3 86.848 77.613 3 4.4581E-61 27742 Miao_Sh-H9_proteinG_mass3_141226_02 118.41 108.27 81023 0 0 0 19031 0 0 0 0 0 20997 19576 21419 + 1050 432 1029 9601;9602;9603;9604;9605;9606;9607;9608;9609;9610;9611;9612;9613 10501;10502;10503;10504;10505;10506;10507;10508;10509;10510;10511;10512;10513;10514;10515;10516;10517 10514 17 GGGHVAQIYAIR Unmodified 1240.6677 0.66765425 259 P62249;M0R210;M0R3H0;M0QX76;M0R1M5 RPS16 40S ribosomal protein S16 yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 2 48.018 48.921 3 0.00019069 5933 Miao_Sh-H9_Flag_mass3_141226_01 105.98 66.353 9215.2 0 0 0 0 0 0 1751.6 2013.6 1812.2 0 0 3637.7 1051 259 1030 9614;9615;9616;9617;9618;9619;9620;9621 10518;10519;10520;10521;10522;10523 10521 6 GGGQIIPTAR Unmodified 968.54033 0.54032847 366;244 P13639;Q15029;Q15029-2;K7EJ81;K7EP67;K7EJ74 EEF2;EFTUD2 Elongation factor 2;116 kDa U5 small nuclear ribonucleoprotein component no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 2 39.734 42.491 2 0.015176 9284 Miao_Sh-H9_proteinG_mass3_141226_03 68.657 49.563 0 0 0 0 0 0 0 0 0 0 0 0 0 1052 366;244 1031 9622;9623 10524;10525 10525 2 GGGSVCPVCR Unmodified 1047.459 0.45898338 167 P19474;F5H012;P19474-2 TRIM21 E3 ubiquitin-protein ligase TRIM21 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 30.897 31.03 2 0.0043003 3450 Miao_Sh-H9_Flag_mass3_141226_01 88.495 59.157 667.72 0 463.5 31.209 0 0 0 173.01 0 0 0 0 0 1053 167 1032 9624;9625;9626;9627 10526;10527 10526 2 GGNFGFGDSR Unmodified 1012.4363 0.43625733 397 P22626;P22626-2 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 45.748 47.51 2 2.0247E-33 11123 Miao_Sh-H9_proteinG_mass3_141226_03 181.53 141.87 28898 58.074 0 58.074 1789.6 912.26 0 645.02 0 0 0 13279 12155 1054 397 1033 9628;9629;9630;9631;9632;9633;9634 10528;10529;10530;10531 10530 4 GGPISFSSSR Unmodified 993.48796 0.48795855 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 2 1 45.345 47.049 2 0.00033247 10853 Miao_Sh-H9_proteinG_mass3_141226_02 117.02 74.153 3991.6 0 113.48 0 0 0 0 0 0 0 0 0 3878.2 1055 434 1034 9635;9636;9637;9638;9639 10532;10533;10534;10535;10536 10534 5 GGPPFAFVEFEDPR Unmodified 1563.7358 0.73579339 234 Q07955;J3KTL2;Q07955-3;Q07955-2;J3QQV5;J3KSW7 SRSF1 Serine/arginine-rich splicing factor 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 87.041 90.049 2 0.00011987 20271 Miao_Sh-c_proteinG_mass3_141226_01 81.904 54.476 0 0 0 0 0 0 0 0 0 0 0 0 0 1056 234 1035 9640;9641 10537;10538 10537 2 GGPSPGDVEAIK Unmodified 1125.5666 0.5666028 215 P09661;H0YMA0;H0YLR3 SNRPA1 U2 small nuclear ribonucleoprotein A' yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 43.327 45.896 2 0.050318 10309 Miao_Sh-H9_proteinG_mass3_141226_03 53.034 26.327 5370.5 102.57 0 0 0 0 334.82 0 0 0 521.52 0 4411.6 1057 215 1036 9642;9643;9644;9645 10539 10539 0 GGPTVDPEELFR Unmodified 1315.6408 0.64083038 632 Q96EY1;Q96EY1-2 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 77.449 65.269 2 0.026513 23084 Miao_Sh-H9_proteinG_mass3_141226_01 49.934 33.161 0 0 0 0 0 0 0 0 0 0 0 0 0 1058 632 1037 9646 10540 10540 1 GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unmodified 3222.2743 0.27429656 432 P35527;CON__P35527;K7EQQ3 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 3 2 39.694 42.451 3;4 2.2003E-26 9257 Miao_Sh-H9_proteinG_mass3_141226_03 70.262 69.269 1762.2 0 0 0 0 0 0 0 0 0 0 0 1762.2 + 1059 432 1038 9647;9648;9649;9650;9651 10541;10542;10543;10544;10545 10544 4 GGSGGSYGGGGSGGGYGGGSGSR Unmodified 1790.7204 0.72043069 432 P35527;CON__P35527;K7EQQ3 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 2 30.577 31.755 2;3 2.5925E-11 6512 Miao_Sh-H9_proteinG_mass3_141226_01 76.241 24.687 0 0 0 0 0 0 0 0 0 0 0 0 0 + 1060 432 1039 9652;9653;9654;9655 10546;10547;10548;10549 10547 4 GHAVGDIPGVR Unmodified 1076.5727 0.57269123 502 P62266;D6RD47 RPS23 40S ribosomal protein S23 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 2 1 1 2 2 1 2 1 41.449 43.467 2;3 0.0012206 9379 Miao_Sh-H9_proteinG_mass3_141226_02 92.051 52.504 12811 0 314.03 58.386 56.051 0 4563.3 0 0 263.94 1820 3630.1 2105.1 1061 502 1040 9656;9657;9658;9659;9660;9661;9662;9663;9664;9665;9666;9667 10550;10551;10552;10553;10554;10555;10556;10557 10555 8 GHLENNPALEK Unmodified 1220.6149 0.61494998 326 P05388;F8VWS0;Q3B7A4;F8VU65;Q8NHW5;F8VPE8;G3V210;F8VW21;F8VZS0;F8VS58;F8VQY6;F8VRK7;F8VWV4 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 33.165 34.719 2 5.2322E-25 6274 Miao_Sh-H9_proteinG_mass3_141226_02 128.97 103.12 2448 0 0 41.763 0 0 0 0 0 0 0 1343.1 1063.2 1062 326 1041 9668;9669;9670;9671 10558;10559;10560 10559 2 GHQQLYWSHPR Unmodified 1407.6796 0.67961592 504 P62273;P62273-2 RPS29 40S ribosomal protein S29 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 1 2 2 3 2 2 1 1 1 39.573 40.171 3;4 1.7887E-06 4374 Miao_Sh-H9_Flag_mass3_141226_01 132.32 104.55 11960 1159.5 377.22 1319.1 1074 414.19 0 1797.4 1664.6 2829.5 552.29 0 771.83 1063 504 1042 9672;9673;9674;9675;9676;9677;9678;9679;9680;9681;9682;9683;9684;9685;9686;9687;9688 10561;10562;10563;10564;10565;10566;10567;10568;10569;10570;10571;10572;10573;10574;10575;10576 10572 14 GHVDILAPTVQELAALEK Unmodified 1903.0415 0.041477469 622 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 2 87.892 89.345 3 0.052179 20009 Miao_Sh-c_proteinG_mass3_141226_01 30.593 23.69 0 0 0 0 0 0 0 0 0 0 0 0 0 1064 622 1043 9689;9690 10577;10578 10577 2 GHYTEGAELVDAVLDVVR Unmodified 1941.9796 0.97960549 315;642 P04350;M0R278;M0R1I1;Q9BUF5;K7ESM5;K7ES63;K7EL29 TUBB4A;TUBB6 Tubulin beta-4A chain;Tubulin beta-6 chain no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 2 1 1 1 109.09 105.11 3 1.4977E-31 25780 Miao_Sh-H9_Flag_mass3_141226_02 153.72 122.84 27234 5403.8 3965.8 2187.6 0 0 0 0 5763.1 5934.1 2888.6 0 1091.1 1065 315;642 1044 9691;9692;9693;9694;9695;9696;9697;9698;9699 10579;10580;10581;10582;10583;10584;10585;10586;10587;10588;10589;10590 10587 12 GHYTEGAELVDSVLDVVR Unmodified 1957.9745 0.97452012 338;530;566;564 P07437;Q5JP53;Q5ST81;E9PBJ4;G3V2A3;P68371;Q9BVA1;Q13885;Q13509;Q13509-2 TUBB;TUBB3;TUBB4B;TUBB2B;TUBB2A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-3 chain no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 7 3 1 2 2 3 5 1 2 1 103.64 101.02 2;3 3.9028E-101 39801 Miao_Sh-H9_proteinG_mass3_141226_02 216.99 201.05 271210 22594 19604 17752 26413 12149 19600 32321 29306 28344 36636 26492 0 1066 338;530;566;564 1045 9700;9701;9702;9703;9704;9705;9706;9707;9708;9709;9710;9711;9712;9713;9714;9715;9716;9717;9718;9719;9720;9721;9722;9723;9724;9725;9726;9727 10591;10592;10593;10594;10595;10596;10597;10598;10599;10600;10601;10602;10603;10604;10605;10606;10607;10608;10609;10610;10611;10612;10613;10614;10615;10616;10617;10618;10619;10620;10621;10622;10623;10624;10625;10626;10627;10628;10629;10630;10631;10632;10633;10634;10635;10636;10637 10636 47 GHYTEGAELVDSVLDVVRK Unmodified 2086.0695 0.069483134 338;530;566;564 P07437;Q5JP53;Q5ST81;E9PBJ4;G3V2A3;P68371;Q9BVA1;Q13885;Q13509;Q13509-2 TUBB;TUBB3;TUBB4B;TUBB2B;TUBB2A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-3 chain no no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 121.89 112.86 4 0.00068868 40117 Miao_Sh-H9_proteinG_mass3_141226_02 64.89 53.943 4388.6 0 0 0 0 0 0 0 0 0 0 4388.6 0 1067 338;530;566;564 1046 9728 10638 10638 0 GIAYIEFK Unmodified 939.50657 0.50656873 389 P19338;H7BY16 NCL Nucleolin yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 2 2 2 2 78.534 74.135 2 0.0048753 12429 Miao_Sh-H9_Flag_mass3_141226_03 94.806 43.908 25451 0 0 0 1069.3 4720.9 6662.1 0 1630.9 0 2283.1 4449.1 4635.1 1068 389 1047 9729;9730;9731;9732;9733;9734;9735;9736;9737;9738;9739;9740;9741 10639;10640;10641;10642;10643;10644;10645;10646;10647 10643 9 GIDPFSLDALSK Unmodified 1261.6554 0.65541781 444 P40227;B4DPJ8;P40227-2 CCT6A T-complex protein 1 subunit zeta yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 2 1 2 1 1 1 1 85.508 83.911 2 0.000947 18293 Miao_Sh-c_proteinG_mass3_141226_02 86.772 4.8526 17601 2878.2 3606.9 474.86 3886.1 0 1412.5 4612.9 0 729.24 0 0 0 1069 444 1048 9742;9743;9744;9745;9746;9747;9748;9749;9750;9751;9752 10648;10649;10650;10651;10652;10653;10654;10655;10656;10657 10653 10 GIDPFSLDSLAK Unmodified 1261.6554 0.65541781 624 Q92526;Q92526-3;Q92526-2 CCT6B T-complex protein 1 subunit zeta-2 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 84.009 85.412 2 0.0013128 16464 Miao_Sh-c_Flag_mass3_141226_03 109.72 3.4637 0 0 0 0 0 0 0 0 0 0 0 0 0 1070 624 1049 9753 10658 10658 1 GIDVQQVSLVINYDLPTNR Unmodified 2143.1273 0.12733236 488 P60842;Q14240;E7EQG2;Q14240-2;Q9NZE6 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 93.213 93.012 3 0.0019779 21278 Miao_Sh-H9_Flag_mass3_141226_02 47.618 36.299 0 0 0 0 0 0 0 0 0 0 0 0 0 1071 488 1050 9754 10659 10659 1 GIFNGFSVTLK Unmodified 1181.6445 0.64445919 177 Q00325;Q00325-2;F8VVM2;F8VZL5;F8VWR4;F8VWQ0 SLC25A3 Phosphate carrier protein, mitochondrial yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 2 2 1 91.204 88.466 2 0.0044531 18360 Miao_Sh-H9_Flag_mass3_141226_01 86.114 33.389 24063 2693.1 3464.5 2633.2 2723.7 0 0 4965.6 3286.6 0 4295.9 0 0 1072 177 1051 9755;9756;9757;9758;9759;9760;9761;9762;9763;9764;9765 10660;10661;10662;10663;10664;10665;10666;10667;10668;10669;10670;10671;10672;10673 10666 14 GIFTSEIGTK Unmodified 1051.555 0.55497548 533 P78527;E7EUY0;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 56.093 58.95 2 0.036739 14948 Miao_Sh-H9_proteinG_mass3_141226_03 55.353 20.966 0 0 0 0 0 0 0 0 0 0 0 0 0 1073 533 1052 9766 10674 10674 1 GIHPTIISESFQK Unmodified 1455.7722 0.7721789 65 P50991;B7Z9L0;P50991-2 CCT4 T-complex protein 1 subunit delta yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 1 1 1 56.315 57.73 3 0.00031835 14975 Miao_Sh-H9_proteinG_mass3_141226_03 78.884 56.971 11444 0 1248.1 994.75 0 1687 1846.5 624.98 646.26 772.59 3624.1 0 0 1074 65 1053 9767;9768;9769;9770;9771;9772;9773;9774;9775;9776 10675;10676;10677;10678;10679;10680;10681;10682;10683 10683 9 GILAADESTGSIAK Unmodified 1331.6933 0.69325988 219 P04075;H3BUH7;H3BPS8;H3BQN4;J3KPS3;P04075-2 ALDOA Fructose-bisphosphate aldolase A yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 50.107 52.413 2 1.2378E-05 12920 Miao_Sh-H9_proteinG_mass3_141226_02 111.12 58.036 4795.4 0 0 0 1210.9 0 0 0 0 0 0 0 3584.5 1075 219 1054 9777;9778;9779 10684;10685 10684 2 GILADEDSSRPVWLK Unmodified 1684.8784 0.87843489 464 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 0 1 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 68.983 71.59 3 0.010323 13122 Miao_Sh-c_proteinG_mass3_141226_01 53.3 35.635 2790.8 0 0 0 2477.1 313.63 0 0 0 0 0 0 0 1076 464 1055 9780;9781 10686 10686 1 GILFVGSGVSGGEEGAR Unmodified 1590.8002 0.80018457 35 P52209;F5H7U0;B4DQJ8;K7EPF6;K7EMN2;K7EM49 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 66.617 67.97 2 1.4895E-17 19456 Miao_Sh-H9_proteinG_mass3_141226_01 125.41 86.623 0 0 0 0 0 0 0 0 0 0 0 0 0 1077 35 1056 9782;9783 10687;10688 10687 2 GILLQLFGGTR Unmodified 1173.687 0.68699271 429 P33991;E5RG31 MCM4 DNA replication licensing factor MCM4 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 93.116 94.419 2 0.056288 19331 Miao_Sh-c_Flag_mass3_141226_03 44.543 23.17 0 0 0 0 0 0 0 0 0 0 0 0 0 1078 429 1057 9784 10689 10689 1 GIPEFWLTVFK Unmodified 1335.7227 0.72270951 22 P55209;H0YHC3;F8W020;F8W118;F8VXI6;F8VUX1;F8VY35;B3KV44;F8VV59;B7Z9C2;F8W0J6;F5H4R6;H0YIV4;P55209-2;H0YH88;F8W543 NAP1L1 Nucleosome assembly protein 1-like 1 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 2 1 110.55 111 2 0.019819 25460 Miao_Sh-c_Flag_mass3_141226_03 59.198 33.96 0 0 0 0 0 0 0 0 0 0 0 0 0 1079 22 1058 9785;9786;9787;9788 10690;10691;10692;10693 10691 4 GIPHLVTHDAR Unmodified 1214.652 0.65200419 511 P62701;P22090;Q8TD47;C9JEH7 RPS4X;RPS4Y1;RPS4Y2 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1;40S ribosomal protein S4, Y isoform 2 yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 2 1 1 1 2 1 1 54.097 51.211 3 0.0043994 3784 Miao_Sh-c_proteinG_mass3_141226_01 68.355 35.093 11081 233.88 263.71 353.54 310.65 228.36 1317.1 383.74 568.85 534.56 3544.9 2629.9 712.21 1080 511 1059 9789;9790;9791;9792;9793;9794;9795;9796;9797;9798;9799;9800;9801;9802 10694;10695;10696;10697;10698;10699;10700;10701 10695 8 GIRPAINVGLSVSR Unmodified 1437.8416 0.84159587 410 P25705;P25705-2;P25705-3 ATP5A1 ATP synthase subunit alpha, mitochondrial yes no 0 0 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 1 59.228 60.465 3 0.00042852 9545 Miao_Sh-c_proteinG_mass3_141226_01 91.307 71.648 12511 1067.5 1293.9 2804.5 2038.5 2550.8 0 0 0 0 2756 0 0 1081 410 1060 9803;9804;9805;9806;9807;9808 10702;10703;10704 10704 3 GISEETTTGVHNLYK Unmodified 1647.8104 0.8104149 403 P23526;P23526-2 AHCY Adenosylhomocysteinase yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching 1 2 1 1 1 1 1 49.037 50.362 3 0.00011192 12714 Miao_Sh-H9_proteinG_mass3_141226_02 95.428 75.585 10504 92.693 1373.1 1005.6 0 0 991.54 0 140.44 3166.2 0 3734.3 0 1082 403 1061 9809;9810;9811;9812;9813;9814;9815;9816 10705;10706;10707;10708 10707 4 GISLNPEQWSQLK Unmodified 1498.778 0.77799256 479 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes yes 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 2 2 2 1 1 86.101 84.614 2 5.9551E-12 17777 Miao_Sh-c_proteinG_mass3_141226_01 145.52 64.814 22736 2107.3 0 0 5939.9 585.48 0 5747.3 1197.7 5943.7 0 0 1214.2 1083 479 1062 9817;9818;9819;9820;9821;9822;9823;9824;9825;9826;9827 10709;10710;10711;10712;10713;10714;10715;10716 10711 8 GITINAAHVEYSTAAR Unmodified 1672.8533 0.85328277 465 P49411 TUFM Elongation factor Tu, mitochondrial yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 53.863 56.269 3 0.0055622 14356 Miao_Sh-H9_proteinG_mass3_141226_02 50.178 33.292 0 0 0 0 0 0 0 0 0 0 0 0 0 1084 465 1063 9828 10717 10717 1 GIVDQSQQAYQEAFEISK Unmodified 2039.98 0.97999942 523 P63104;B0AZS6;P63104-2;B7Z2E6;H0YB80 YWHAZ 14-3-3 protein zeta/delta yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 2 2 2 80.913 74.648 2;3 7.9718E-07 17098 Miao_Sh-H9_Flag_mass3_141226_03 78.78 64.187 6453.4 409.44 0 0 0 0 0 0 1925.8 0 4118.1 0 0 1085 523 1064 9829;9830;9831;9832;9833;9834;9835;9836 10718;10719;10720;10721;10722;10723;10724 10721 7 GIVEFASK Unmodified 849.45962 0.45961853 399 P23246;P23246-2 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 2 1 2 47.22 49.826 2 0.0025922 10621 Miao_Sh-c_proteinG_mass3_141226_03 101.43 58.307 3235.7 0 0 0 0 0 0 0 0 0 0 3235.7 0 1086 399 1065 9837;9838;9839;9840;9841 10725;10726;10727;10728;10729 10725 5 GIVEFSGKPAAR Unmodified 1230.6721 0.67207093 578 Q15233;Q15233-2;C9IZL7;H7C367 NONO Non-POU domain-containing octamer-binding protein yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 1 46.502 46.802 3 0.0034711 9366 Miao_Sh-c_proteinG_mass3_141226_03 68.536 32.994 1340 0 0 0 0 0 0 220.47 0 0 1119.5 0 0 1087 578 1066 9842;9843;9844 10730;10731 10730 2 GIYAYGFEK Unmodified 1046.5073 0.50729701 488 P60842;J3QL43;J3KT12;P60842-2;Q14240;J3KTB5;J3QS69;E7EQG2;Q14240-2;J3QR64;J3QKZ9;J3QLN6;J3KS25;B4E102;J3KS93;J3KSN7;P38919;J3KT04;E7EMV8;C9JUF0;J3QQP0;E9PBH4;F8WE11;I3L3H2 EIF4A1;EIF4A2;EIF4A3 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 2 82.633 75.014 2 0.0027719 25268 Miao_Sh-c_proteinG_mass3_141226_03 93.649 61.329 6665.2 0 0 0 376.82 332.89 0 0 0 0 0 3466.9 2488.6 1088 488 1067 9845;9846;9847;9848;9849;9850 10732;10733;10734 10732 3 GLAEDIENEVVQITWNR Unmodified 1984.9854 0.98541915 244 Q15029;Q15029-2;K7EJ81;K7EP67 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 112.44 111.99 3 0.0039658 27386 Miao_Sh-H9_Flag_mass3_141226_01 48.423 36.84 0 0 0 0 0 0 0 0 0 0 0 0 0 1089 244 1068 9851 10735 10735 1 GLAITFVSDENDAK Unmodified 1478.7253 0.72528829 175 O00148;Q13838;F8VQ10;Q13838-2;H0Y400;B4DP52 DDX39A;DDX39B;hCG_2005638 ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 1 69.15 69.964 2 0.0024935 11497 Miao_Sh-c_Flag_mass3_141226_01 68.044 41.512 7135.4 1696.8 0 0 1898.2 0 0 2170.2 0 0 0 0 1370.3 1090 175 1069 9852;9853;9854;9855;9856 10736;10737;10738 10736 3 GLAPDLPEDLYHLIK Unmodified 1692.9087 0.90867238 505 P62277;J3KMX5 RPS13 40S ribosomal protein S13 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 1 6 2 1 3 2 1 2 3 101.26 98.733 2;3 2.9135E-05 38244 Miao_Sh-c_proteinG_mass3_141226_03 84.753 73.111 212570 15260 0 9094.4 37969 19320 20014 15660 4998.1 14506 50771 24977 0 1091 505 1070 9857;9858;9859;9860;9861;9862;9863;9864;9865;9866;9867;9868;9869;9870;9871;9872;9873;9874;9875;9876;9877;9878;9879 10739;10740;10741;10742;10743;10744;10745;10746;10747;10748;10749;10750;10751;10752;10753;10754;10755;10756;10757;10758;10759;10760;10761;10762;10763;10764;10765;10766;10767;10768;10769;10770;10771;10772;10773 10753 35 GLDIYVWR Unmodified 1020.5393 0.53926584 556 Q13045;Q13045-2;Q13045-3 FLII Protein flightless-1 homolog yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 83.02 81.454 2 0.028807 16752 Miao_Sh-c_proteinG_mass3_141226_01 75.213 43.923 3796.3 0 0 1140.3 1046.5 1118.8 490.78 0 0 0 0 0 0 1092 556 1071 9880;9881;9882;9883 10774 10774 1 GLDVDSLVIEHIQVNK Unmodified 1777.9574 0.95741349 231 P18621;J3QQT2;J3KRX5;P18621-3;J3QS96;J3QLC8;P18621-2 RPL17 60S ribosomal protein L17 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 3 1 4 2 1 1 3 1 2 92.257 88.14 2;3 2.1705E-11 33683 Miao_Sh-H9_proteinG_mass3_141226_01 124.5 100.56 80959 6858.8 4976.4 0 17710 5433 0 0 7878.8 0 15023 10721 12358 1093 231 1072 9884;9885;9886;9887;9888;9889;9890;9891;9892;9893;9894;9895;9896;9897;9898;9899;9900;9901;9902;9903;9904;9905 10775;10776;10777;10778;10779;10780;10781;10782;10783;10784;10785;10786;10787;10788;10789;10790;10791;10792;10793;10794;10795;10796;10797;10798;10799;10800;10801;10802;10803;10804;10805;10806 10796 32 GLEDNQGGQYESWNYYR Unmodified 2077.8766 0.87659699 609 Q8IXB1;Q8IXB1-2;Q8IXB1-3;E7EP04 DNAJC10 DnaJ homolog subfamily C member 10 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching 2 1 1 67.573 68.893 2;3 0.00017128 12515 Miao_Sh-c_proteinG_mass3_141226_01 66.568 58.002 8790.1 0 0 0 3774.1 0 0 0 0 0 2625.8 0 2390.2 1094 609 1073 9906;9907;9908;9909 10807;10808;10809 10807 3 GLFIIDDK Unmodified 919.50148 0.50148335 545 Q06830;Q13162;H7C3T4 PRDX1;PRDX4 Peroxiredoxin-1;Peroxiredoxin-4 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 2 1 3 1 70.643 70.894 2 0.0048832 13152 Miao_Sh-c_proteinG_mass3_141226_02 103.83 65.041 14219 1613.7 0 461.87 2515.1 2216.8 2746.7 0 0 0 2351.8 2109.3 203.54 1095 545 1074 9910;9911;9912;9913;9914;9915;9916;9917;9918;9919;9920 10810;10811;10812;10813;10814;10815;10816 10812 7 GLGLDDALEPR Unmodified 1154.5932 0.5931519 671 Q9Y230;X6R2L4;M0R0Z0 RUVBL2 RuvB-like 2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 1 2 63.103 65.643 2 0.0038395 17581 Miao_Sh-H9_proteinG_mass3_141226_03 92.707 67.856 0 0 0 0 0 0 0 0 0 0 0 0 0 1096 671 1075 9921;9922;9923 10817;10818;10819 10819 3 GLGLDESGLAK Unmodified 1058.5608 0.56078914 672 Q9Y265;Q9Y265-2 RUVBL1 RuvB-like 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 53.186 55.692 2 0.0028222 14100 Miao_Sh-H9_proteinG_mass3_141226_02 84.479 42.143 0 0 0 0 0 0 0 0 0 0 0 0 0 1097 672 1076 9924 10820 10820 1 GLGTDEDTLIEILASR Unmodified 1701.8785 0.87849447 313 P04083;Q5T3N1 ANXA1 Annexin A1;Annexin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 101.21 102.22 2 1.9781E-05 24035 Miao_Sh-H9_Flag_mass3_141226_01 80.545 61.259 18030 1652.7 0 0 0 14105 0 2272.8 0 0 0 0 0 1098 313 1077 9925;9926;9927 10821 10821 1 GLGVGFGSGGGSSSSVK Unmodified 1438.7052 0.70522155 105 P13647;CON__P13647 KRT5 Keratin, type II cytoskeletal 5 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 1 52.247 54.77 2 0.044703 13492 Miao_Sh-H9_proteinG_mass3_141226_01 40.014 30.359 17632 3624.1 0 4796.2 0 373.66 3614 0 0 0 1671.5 0 3552.1 + 1099 105 1078 9928;9929;9930;9931;9932;9933 10822 10822 1 GLIAEAAQLGPVGGVFNLAVVLR Unmodified 2263.3052 0.30523715 464 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 114.82 115.04 3 5.289E-23 26908 Miao_Sh-c_Flag_mass3_141226_01 113.51 99.878 12918 5274.5 6196 0 0 0 0 0 1448 0 0 0 0 1100 464 1079 9934;9935;9936 10823;10824 10823 2 GLLLFVDEADAFLR Unmodified 1577.8453 0.84534384 200 Q9NVI7;Q5T2N8;Q5SV16;H0Y2W2;Q9NVI7-3;Q9NVI7-2 ATAD3A;ATAD3C ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3C yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 114.58 114.58 2 0.000588 26627 Miao_Sh-c_Flag_mass3_141226_01 74.853 47.59 0 0 0 0 0 0 0 0 0 0 0 0 0 1101 200 1080 9937 10825 10825 1 GLLLYGPPGTGK Unmodified 1171.6601 0.66010926 241 Q8IYT4;K7EM02;K7EIJ8;Q8IYT4-2 KATNAL2 Katanin p60 ATPase-containing subunit A-like 2 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 4 1 1 63.449 64.515 2 5.4987E-10 11320 Miao_Sh-H9_Flag_mass3_141226_01 143 112.38 83955 8735.9 8123.4 7791.6 0 0 2388.8 14213 0 42216 486.9 0 0 1102 241 1081 9938;9939;9940;9941;9942;9943;9944;9945;9946;9947;9948 10826;10827;10828;10829;10830;10831;10832;10833;10834;10835;10836;10837;10838;10839;10840;10841;10842;10843;10844 10837 19 GLLQSGQIPGR Unmodified 1124.6302 0.63020611 215 P09661;H0YMA0;H0YLR3 SNRPA1 U2 small nuclear ribonucleoprotein A' yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 53.057 54.811 2 1.279E-09 13796 Miao_Sh-H9_proteinG_mass3_141226_02 143.24 75.341 7308.6 0 2146.1 714.65 0 0 0 0 0 0 0 2268.9 2179 1103 215 1082 9949;9950;9951;9952 10845;10846;10847;10848 10845 4 GLQDVLR Unmodified 799.4552 0.45520186 444;624 P40227;P40227-2;Q92526;Q92526-3;Q92526-2 CCT6A;CCT6B T-complex protein 1 subunit zeta;T-complex protein 1 subunit zeta-2 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 52.97 54.792 2 0.024613 13311 Miao_Sh-H9_proteinG_mass3_141226_03 89.142 20.355 3521.6 249.58 0 0 0 0 0 0 0 0 0 1631.6 1640.4 1104 444;624 1083 9953;9954;9955 10849;10850;10851 10851 3 GLSEDTTEETLK Unmodified 1321.6249 0.62490554 389 P19338;H7BY16 NCL Nucleolin yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 2 1 2 2 2 1 1 1 1 44.852 46.06 2 5.0743E-16 10208 Miao_Sh-H9_proteinG_mass3_141226_03 158.42 121.07 32044 0 641.65 0 72.218 474.93 0 986.67 104.04 1978.5 12394 688.98 14703 1105 389 1084 9956;9957;9958;9959;9960;9961;9962;9963;9964;9965;9966;9967;9968;9969;9970 10852;10853;10854;10855;10856;10857;10858;10859;10860;10861;10862;10863 10863 12 GLSQSALPYR Unmodified 1090.5771 0.57710791 505 P62277;J3KMX5;E9PS50 RPS13 40S ribosomal protein S13 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 2 2 1 2 1 1 1 1 1 2 48.794 50.625 2 2.8954E-84 12285 Miao_Sh-H9_proteinG_mass3_141226_03 220.17 119.34 77718 1621.9 1316.7 1298.2 1701.4 4341.7 16067 3033.8 753.21 0 15979 15320 16285 1106 505 1085 9971;9972;9973;9974;9975;9976;9977;9978;9979;9980;9981;9982;9983;9984;9985 10864;10865;10866;10867;10868;10869;10870;10871;10872;10873;10874;10875;10876;10877;10878;10879;10880;10881;10882;10883;10884;10885 10884 22 GLTPSQIGVILR Unmodified 1252.7503 0.75032125 505 P62277;J3KMX5 RPS13 40S ribosomal protein S13 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 3 1 2 1 9 1 1 2 4 6 2 81.575 76.792 2;3 2.8089E-22 22158 Miao_Sh-H9_proteinG_mass3_141226_03 160.16 122.81 219440 12101 10375 11718 26610 32682 22471 16941 15482 12098 30694 13252 15019 1107 505 1086 9986;9987;9988;9989;9990;9991;9992;9993;9994;9995;9996;9997;9998;9999;10000;10001;10002;10003;10004;10005;10006;10007;10008;10009;10010;10011;10012;10013;10014;10015;10016;10017;10018 10886;10887;10888;10889;10890;10891;10892;10893;10894;10895;10896;10897;10898;10899;10900;10901;10902;10903;10904;10905;10906;10907;10908;10909;10910;10911;10912;10913;10914;10915;10916;10917;10918;10919;10920;10921;10922;10923;10924;10925;10926 10923 41 GLTSVINQK Unmodified 958.54475 0.54474515 336 P07195 LDHB L-lactate dehydrogenase B chain yes yes 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 45.232 47.051 2 0.00034804 10947 Miao_Sh-H9_proteinG_mass3_141226_02 120.87 66.092 23615 0 280.3 0 0 0 5173.1 470.18 0 388.8 6874.3 5601.8 4826.7 1108 336 1087 10019;10020;10021;10022;10023;10024;10025 10927;10928;10929;10930;10931;10932;10933 10932 7 GLVQALQTK Unmodified 956.56548 0.56548059 464 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 51.91 52.662 2 0.0036722 13408 Miao_Sh-H9_proteinG_mass3_141226_01 90.696 27.978 0 0 0 0 0 0 0 0 0 0 0 0 0 1109 464 1088 10026 10934 10934 1 GLVVPVIR Unmodified 851.55927 0.559273 439 P36957;B7Z5W8 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 63.859 65.523 2 0.046125 10225 Miao_Sh-c_Flag_mass3_141226_03 66.993 32.169 3635.3 0 449.38 474.84 0 553.87 0 0 0 879.94 0 0 1277.3 1110 439 1089 10027;10028;10029;10030;10031 10935 10935 1 GNFGGSFAGSFGGAGGHAPGVAR Unmodified 2033.9456 0.94562002 471 P52272;P52272-2;M0QY96;M0R2I7 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 62.784 65.265 3 4.3332E-26 11016 Miao_Sh-c_proteinG_mass3_141226_01 96.848 87.812 11687 0 0 0 0 2606.8 3403.6 714.55 0 0 4962 0 0 1111 471 1090 10032;10033;10034;10035;10036;10037 10936;10937;10938;10939 10936 4 GNFNYIEFTR Unmodified 1259.5935 0.59348625 240 O14950;P19105;J3QRS3 MYL12B;MYL12A Myosin regulatory light chain 12B;Myosin regulatory light chain 12A yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 2 1 4 3 5 1 2 1 3 3 7 76.794 75.074 2;3 1.68E-141 12349 Miao_Sh-c_Flag_mass3_141226_01 256.48 210.65 1485700 124990 69817 67329 195260 172860 150930 81767 89077 74602 177490 153830 127780 1112 240 1091 10038;10039;10040;10041;10042;10043;10044;10045;10046;10047;10048;10049;10050;10051;10052;10053;10054;10055;10056;10057;10058;10059;10060;10061;10062;10063;10064;10065;10066;10067;10068;10069;10070;10071;10072;10073 10940;10941;10942;10943;10944;10945;10946;10947;10948;10949;10950;10951;10952;10953;10954;10955;10956;10957;10958;10959;10960;10961;10962;10963;10964;10965;10966;10967;10968;10969;10970;10971;10972;10973;10974;10975;10976;10977;10978;10979;10980;10981;10982;10983;10984;10985;10986;10987;10988;10989;10990;10991;10992;10993;10994;10995;10996;10997;10998;10999;11000;11001;11002;11003;11004;11005;11006;11007;11008;11009;11010;11011;11012;11013;11014;11015;11016;11017;11018;11019;11020;11021;11022;11023;11024;11025;11026 10941 87 GNPTVEVDLFTSK Unmodified 1405.7089 0.70890994 333 P06733;K7EM90 ENO1 Alpha-enolase;Enolase yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 3 1 1 5 2 1 4 5 5 4 79.016 74.558 2 7.1131E-06 20532 Miao_Sh-H9_proteinG_mass3_141226_02 121.99 19.466 96882 290.64 631.26 0 0 3984.6 2536.6 15805 0 3036.6 27860 16935 25802 1113 333 1092 10074;10075;10076;10077;10078;10079;10080;10081;10082;10083;10084;10085;10086;10087;10088;10089;10090;10091;10092;10093;10094;10095;10096;10097;10098;10099;10100;10101;10102;10103;10104;10105 11027;11028;11029;11030;11031;11032;11033;11034;11035;11036;11037;11038;11039;11040;11041;11042;11043;11044;11045;11046;11047;11048;11049;11050;11051;11052;11053;11054;11055;11056 11047 30 GNVGFVFTK Unmodified 967.51272 0.51271674 326 P05388;F8VWS0;Q3B7A4;F8VU65;F8VPE8;G3V210;F8VW21;F8VZS0;F8VS58;F8VQY6;F8VRK7;F8VWV4 RPLP0 60S acidic ribosomal protein P0 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 2 1 59.34 60.769 2 0.0061424 16045 Miao_Sh-H9_proteinG_mass3_141226_02 83.358 60.315 12379 0 0 0 0 0 0 0 0 0 6509.1 5870.4 0 1114 326 1093 10106;10107;10108 11057;11058;11059 11059 3 GPAREPQVYVLAPPQEELSK Unmodified 2207.1586 0.15863249 92;93 CON__ENSEMBL:ENSBTAP00000024462;CON__ENSEMBL:ENSBTAP00000024466 no no 0 0 0 0 1 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 2 1 2 2 2 1 65.612 67.461 3 8.091E-08 18089 Miao_Sh-H9_proteinG_mass3_141226_03 73.809 51.179 70569 244.13 0 0 10531 11986 13792 0 3127.5 0 12913 0 17976 + 1115 92;93 1094 10109;10110;10111;10112;10113;10114;10115;10116;10117;10118;10119;10120 11060;11061;11062;11063;11064;11065;11066;11067;11068;11069;11070;11071 11071 12 GPAVGIDLGTTYSCVGVFQHGK Unmodified 2262.1103 0.11030209 356 P11142;E9PKE3;P11142-2;E9PNE6;E9PLF4;E9PI65;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25 HSPA8 Heat shock cognate 71 kDa protein yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 2 101.9 95.842 3 1.2853E-15 14449 Miao_Sh-c_Flag_mass3_141226_03 86.539 78.255 10554 930.29 0 0 454.03 0 2057.5 0 0 0 0 7112.2 0 1116 356 1095 10121;10122;10123;10124;10125;10126 11072;11073;11074 11072 3 GPCIIYNEDNGIIK Unmodified 1604.7868 0.78684269 438 P36578;H3BM89 RPL4 60S ribosomal protein L4 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 1 66.666 66.816 2 0.0015746 17202 Miao_Sh-c_proteinG_mass3_141226_03 69.456 53.258 2710.4 0 0 0 0 0 0 0 0 561.78 2148.6 0 0 1117 438 1096 10127;10128;10129 11075;11076 11075 2 GPDGMALPRPR Oxidation (M) 1181.5975 0.59752577 573 Q14764 MVP Major vault protein yes yes 0 0 1 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 35.654 36.957 3 0.04499 6897 Miao_Sh-H9_proteinG_mass3_141226_03 66.056 50.426 2074.3 68.015 0 0 0 0 0 0 0 0 355.03 847.2 804.1 1118 573 1097 10130;10131;10132;10133 11077 11077 1 GPGTSFEFALAIVEALNGK Unmodified 1919.9993 0.9992783 247 Q99497;K7EN27;K7ELW0 PARK7 Protein DJ-1 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 2 1 120.69 121.26 2;3 5.3276E-05 37812 Miao_Sh-H9_proteinG_mass3_141226_03 63.321 44.499 3876.3 0 2665.8 687.37 0 0 0 0 0 523.06 0 0 0 1119 247 1098 10134;10135;10136;10137;10138;10139 11078;11079;11080;11081 11081 4 GPHHLDNSSPGPGSEAR Unmodified 1713.7819 0.78190874 619 Q8WWM7;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7-3;H3BUF6 ATXN2L Ataxin-2-like protein yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 27.548 27.999 3 0.0067666 5374 Miao_Sh-H9_proteinG_mass3_141226_03 45.883 31.092 310.02 0 0 0 0 0 0 0 0 0 0 0 310.02 1120 619 1099 10140 11082 11082 1 GPLASQISGLYLPYK Unmodified 1605.8766 0.87664397 393 P21589;P21589-2;Q96B60 NT5E 5'-nucleotidase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 85.617 85.291 2;3 0.0016087 32079 Miao_Sh-H9_proteinG_mass3_141226_01 65.374 48.601 2342.9 0 0 0 0 0 0 1487.9 855.04 0 0 0 0 1121 393 1100 10141;10142;10143;10144 11083;11084;11085 11084 3 GPLEYVPSAK Unmodified 1059.5601 0.56006086 573 Q14764 MVP Major vault protein yes yes 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 2 53.984 56.269 2 1.3334E-43 13729 Miao_Sh-H9_proteinG_mass3_141226_03 192.21 149.87 121510 0 0 0 5559.8 7016.2 0 0 0 0 34965 37059 36913 1122 573 1101 10145;10146;10147;10148;10149;10150 11086;11087;11088;11089;11090;11091;11092;11093;11094;11095;11096;11097;11098;11099;11100;11101;11102;11103;11104 11102 19 GPLLEDGALSQAVSAGASSPEFTK Unmodified 2331.1594 0.15942035 612 Q8NCA5;Q8NCA5-2;E9PH82;C9J3G8 FAM98A Protein FAM98A yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 2 1 1 93.84 80.495 3 1.4714E-10 28743 Miao_Sh-H9_proteinG_mass3_141226_02 69.704 56.954 0 0 0 0 0 0 0 0 0 0 0 0 0 1123 612 1102 10151;10152;10153;10154 11105;11106;11107;11108 11107 4 GPLPAAPPVAPER Unmodified 1270.7034 0.70337105 183 Q9NQC3;Q9NQC3-2;F8W914;Q9NQC3-5 RTN4 Reticulon-4;Reticulon yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 52.06 55.017 2 0.0028707 13401 Miao_Sh-H9_proteinG_mass3_141226_03 69.229 59.125 0 0 0 0 0 0 0 0 0 0 0 0 0 1124 183 1103 10155 11109 11109 1 GPLQSVQVFGR Unmodified 1186.6459 0.64585618 259 P62249;M0R210;M0R3H0;Q6IPX4 RPS16 40S ribosomal protein S16 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 2 2 4 1 1 1 67.342 68.144 2 9.8986E-40 18792 Miao_Sh-H9_proteinG_mass3_141226_02 186.81 143.5 56441 5475 3753.9 3167 6926.1 6960.4 0 1205.2 1328.5 7807.8 9092.5 10725 0 1125 259 1104 10156;10157;10158;10159;10160;10161;10162;10163;10164;10165;10166;10167;10168;10169;10170;10171 11110;11111;11112;11113;11114;11115;11116;11117;11118;11119;11120;11121;11122;11123;11124;11125;11126;11127;11128;11129;11130;11131;11132;11133;11134;11135;11136;11137;11138 11136 29 GPQPPTVSPIR Unmodified 1147.635 0.63495714 455 P46087;P46087-2;P46087-4 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 46.967 48.796 2 0.0059456 11958 Miao_Sh-H9_proteinG_mass3_141226_01 72.531 53.859 0 0 0 0 0 0 0 0 0 0 0 0 0 1126 455 1105 10172;10173 11139;11140 11139 2 GPSSVEDIK Unmodified 930.46583 0.46582612 334 P06748;P06748-2;P06748-3 NPM1 Nucleophosmin yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1 1 1 35.313 36.803 2 2.6981E-06 3473 Miao_Sh-H9_Flag_mass3_141226_02 138.08 85.143 49596 2438 1903.8 91.549 119.8 1985.6 9571.4 0 2228.6 2083.2 11629 9142.5 8402.3 1127 334 1106 10174;10175;10176;10177;10178;10179;10180;10181;10182;10183;10184 11141;11142;11143;11144;11145;11146;11147;11148;11149;11150;11151;11152;11153;11154;11155;11156;11157;11158;11159 11149 19 GPTEQLVSPEPEVYEILR Unmodified 2055.0524 0.052436086 297;296 O75688-2;C9JIR6;O75688-4;O75688-5;O75688 PPM1B Protein phosphatase 1B no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 9 5 1 2 1 5 91.165 91.24 2;3 3.9702E-81 20641 Miao_Sh-H9_Flag_mass3_141226_03 157.47 139.45 177230 22822 31529 23254 1392.7 0 0 35903 16653 45679 0 0 0 1128 297;296 1107 10185;10186;10187;10188;10189;10190;10191;10192;10193;10194;10195;10196;10197;10198;10199;10200;10201;10202;10203;10204;10205;10206;10207;10208 11160;11161;11162;11163;11164;11165;11166;11167;11168;11169;11170;11171;11172;11173;11174;11175;11176;11177;11178;11179;11180;11181;11182;11183;11184;11185;11186;11187;11188;11189;11190;11191;11192;11193;11194;11195;11196;11197 11197 37 GPYESGSGHSSGLGHR Unmodified 1583.7077 0.70768116 112 Q86YZ3;CON__Q86YZ3 HRNR Hornerin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 2 1 3 1 2 3 2 27.631 28.954 2;3;4 5.4797E-06 5978 Miao_Sh-H9_proteinG_mass3_141226_01 80.738 64.764 7935.2 23.581 0 84.614 218.74 20.807 1520.9 0 36.328 0 2243.6 1629.6 2157 + 1129 112 1108 10209;10210;10211;10212;10213;10214;10215;10216;10217;10218;10219;10220;10221;10222;10223;10224;10225 11198;11199;11200;11201;11202;11203;11204;11205 11201 8 GQDPLADR Unmodified 870.41954 0.41954463 573 Q14764 MVP Major vault protein yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 2 34.049 35.837 2 0.013833 6931 Miao_Sh-H9_proteinG_mass3_141226_03 83.948 23.188 0 0 0 0 0 0 0 0 0 0 0 0 0 1130 573 1109 10226;10227;10228 11206;11207;11208 11208 3 GQDPLADRGEK Unmodified 1184.5786 0.57856447 573 Q14764 MVP Major vault protein yes yes 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching 1 1 29.021 32.504 2;3 0.0049202 6023 Miao_Sh-H9_proteinG_mass3_141226_02 72.34 35.916 0 0 0 0 0 0 0 0 0 0 0 0 0 1131 573 1110 10229;10230 11209;11210 11210 2 GQEFVDEIQGR Unmodified 1276.6048 0.60477922 150 Q13490;E9PMH5;Q13490-2;E9PIW1 BIRC2 Baculoviral IAP repeat-containing protein 2 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 2 1 1 56.576 56.876 2 0.0087791 8690 Miao_Sh-H9_Flag_mass3_141226_03 73.435 56.204 6047.7 874.56 0 0 0 0 0 0 1856.9 2174.2 0 0 1142 1132 150 1111 10231;10232;10233;10234;10235;10236 11211;11212;11213;11214 11214 4 GQFSTDELVAEVEK Unmodified 1550.7464 0.74641766 535 Q00610;Q00610-2;P53675;J3KR87;P53675-2 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain 2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 1 72.84 72.765 2 2.4389E-05 15323 Miao_Sh-H9_Flag_mass3_141226_01 94.007 73.8 59675 705.62 1780.8 0 0 0 0 0 2373 54816 0 0 0 1133 535 1112 10237;10238;10239;10240;10241;10242 11215;11216;11217 11215 3 GQGTYEDYLEGFR Unmodified 1533.6736 0.67358707 370 P14649 MYL6B Myosin light chain 6B yes yes 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 2 2 1 4 1 3 4 5 4 1 81.814 77.8 2;3 3.9105E-06 30150 Miao_Sh-H9_proteinG_mass3_141226_02 119.79 98.782 28665 4321.4 0 897.92 2895.3 422.23 6373.2 5142.1 0 689.55 2124.2 5486.2 312.56 1134 370 1113 10243;10244;10245;10246;10247;10248;10249;10250;10251;10252;10253;10254;10255;10256;10257;10258;10259;10260;10261;10262;10263;10264;10265;10266;10267;10268;10269;10270;10271 11218;11219;11220;11221;11222;11223;11224;11225;11226;11227;11228;11229;11230;11231;11232;11233;11234;11235;11236;11237;11238;11239;11240 11240 23 GQSEDPGSLLSLFR Unmodified 1504.7522 0.75217174 165 P08195;P08195-3;F5GZS6;J3KPF3;P08195-2;P08195-4;F5GZI0 SLC3A2 4F2 cell-surface antigen heavy chain yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 97.502 97.301 2 0.0060323 22823 Miao_Sh-H9_Flag_mass3_141226_02 57.973 40.761 0 0 0 0 0 0 0 0 0 0 0 0 0 1135 165 1114 10272 11241 11241 1 GSAITGPVAK Unmodified 899.50763 0.50763136 514 P62829;J3KTJ3 RPL23 60S ribosomal protein L23 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 31.996 34.92 2 0.013195 6041 Miao_Sh-c_proteinG_mass3_141226_03 72.2 45.817 3734.6 0 0 0 303.55 0 1920.2 0 0 0 0 0 1510.9 1136 514 1115 10273;10274;10275;10276;10277 11242;11243;11244;11245 11243 4 GSAPPGPVPEGSIR Unmodified 1319.6834 0.68336389 532 P78417;P78417-2 GSTO1 Glutathione S-transferase omega-1 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 2 1 46.48 46.881 2 0.00025566 5562 Miao_Sh-H9_Flag_mass3_141226_01 85.081 61.405 3832.4 354.97 238.78 229.31 0 0 0 631.61 502.48 523.89 0 0 1351.3 1137 532 1116 10278;10279;10280;10281;10282;10283;10284;10285 11246;11247;11248;11249 11247 4 GSCGIGGGIGGGSSR Unmodified 1277.5782 0.5782469 97;102 P02533;CON__P02533;K7ENV3;P08779;CON__P08779 KRT14;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 36.126 38.56 2 2.2864E-05 7662 Miao_Sh-H9_proteinG_mass3_141226_03 110.22 82.008 5259.7 0 0 0 0 0 1991.1 45.29 0 0 0 1621 1602.3 + 1138 97;102 1117 10286;10287;10288;10289;10290 11250;11251;11252 11252 3 GSGGLGGACGGAGFGSR Unmodified 1423.6263 0.62625972 98 P02538;CON__P02538;P48668;CON__P04259;CON__P48668 KRT6A;KRT6C Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C no no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 42.649 46.17 2 2.069E-99 11140 Miao_Sh-H9_proteinG_mass3_141226_01 214.41 182.54 32187 0 0 0 0 101.26 9210.4 0 0 0 13283 9592.4 0 + 1139 98 1118 10291;10292;10293;10294;10295 11253;11254;11255;11256;11257 11255 4 GSGTAEVELK Unmodified 989.50294 0.50293991 368 P14618;P14618-2;P14618-3;H3BTN5;H3BQ34;H3BT25;H3BUW1;H3BTJ2 PKM Pyruvate kinase PKM;Pyruvate kinase yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 1 36.165 36.582 2 0.012174 3822 Miao_Sh-c_Flag_mass3_141226_01 73.499 51.368 1999.5 384.88 321.55 303.45 121.84 0 0 29.468 0 0 838.3 0 0 1140 368 1119 10296;10297;10298;10299;10300;10301 11258 11258 1 GSLEVLNLK Unmodified 971.56515 0.56514624 678 Q9Y3A5 SBDS Ribosome maturation protein SBDS yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 64.417 64.868 2 0.032065 18358 Miao_Sh-H9_proteinG_mass3_141226_01 64.841 24.773 56844 0 0 0 0 0 0 0 0 0 56844 0 0 1141 678 1120 10302 11259 11259 1 GSLGGGFSSGGFSGGSFSR Unmodified 1706.7649 0.76486169 104 P13645;CON__P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 4 3 2 1 1 4 6 4 5 68.187 68.011 2;3 1.3668E-25 23526 Miao_Sh-H9_proteinG_mass3_141226_01 132.03 114.44 61014 2477.1 0 877.88 12070 2543.4 4049.5 5920.3 4833.4 8250.2 10601 5854.9 3536.7 + 1142 104 1121 10303;10304;10305;10306;10307;10308;10309;10310;10311;10312;10313;10314;10315;10316;10317;10318;10319;10320;10321;10322;10323;10324;10325;10326;10327;10328;10329;10330;10331;10332;10333;10334;10335 11260;11261;11262;11263;11264;11265;11266;11267;11268;11269;11270;11271;11272;11273;11274;11275;11276;11277;11278;11279;11280;11281;11282;11283;11284;11285;11286;11287;11288;11289;11290;11291;11292;11293;11294;11295;11296;11297;11298;11299;11300 11283 39 GSSGGGCFGGSSGGYGGLGGFGGGSFR Unmodified 2341.9771 0.97705609 104 P13645;CON__P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 4 4 1 3 93.415 80.149 2;3 4.5387E-50 26276 Miao_Sh-H9_proteinG_mass3_141226_01 116.38 107.71 9766.4 0 0 0 0 0 357.71 0 0 0 0 5205.8 4202.9 + 1143 104 1122 10336;10337;10338;10339;10340;10341;10342;10343;10344;10345;10346;10347 11301;11302;11303;11304;11305;11306;11307;11308;11309;11310;11311;11312 11304 12 GSTAPVGGGAFPTIVER Unmodified 1614.8366 0.83657007 57 Q15084;Q15084-3;F8WA83;B5MCQ5;Q15084-2 PDIA6 Protein disulfide-isomerase A6 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 68.878 67.875 2 0.0005562 12628 Miao_Sh-H9_Flag_mass3_141226_02 65.175 40.322 0 0 0 0 0 0 0 0 0 0 0 0 0 1144 57 1123 10348 11313 11313 1 GSYGDLGGPIITTQVTIPK Unmodified 1916.0255 0.025493054 494 P61978;P61978-2;Q5T6W5;P61978-3;Q5T6W2;S4R359 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 3 1 1 1 2 2 2 2 2 1 3 85.174 78.781 2;3 9.4094E-17 17168 Miao_Sh-H9_Flag_mass3_141226_03 102.98 82.624 32939 6432.4 5217.1 0 0 1353.6 260.78 7528.7 0 0 0 4062.4 8084.2 1145 494 1124 10349;10350;10351;10352;10353;10354;10355;10356;10357;10358;10359;10360;10361;10362;10363;10364;10365;10366;10367;10368;10369 11314;11315;11316;11317;11318;11319;11320;11321;11322;11323;11324;11325;11326;11327 11321 14 GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unmodified 3311.3008 0.30084566 314 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 2 1 1 42.745 44.249 3;4 1.2492E-65 10468 Miao_Sh-H9_proteinG_mass3_141226_01 109.62 100 9056.2 0 190.77 0 1427.8 0 0 0 0 0 0 7437.6 0 + 1146 314 1125 10370;10371;10372;10373;10374;10375 11328;11329;11330;11331;11332 11329 5 GTDVNVFNTILTTR Unmodified 1549.81 0.81002097 313 P04083 ANXA1 Annexin A1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 88.833 88.081 2 0.00079478 19053 Miao_Sh-H9_Flag_mass3_141226_01 73.722 58.753 0 0 0 0 0 0 0 0 0 0 0 0 0 1147 313 1126 10376 11333 11333 1 GTEDFIVESLDASFR Unmodified 1684.7944 0.79443049 70 P43307;F5H5Y2;C9J3L8;C9J5W0;E9PAL7;C9IZQ1;P43307-2 SSR1 Translocon-associated protein subunit alpha yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 99.291 100.74 3 0.0023891 24516 Miao_Sh-c_proteinG_mass3_141226_01 59.709 48.474 0 0 0 0 0 0 0 0 0 0 0 0 0 1148 70 1127 10377 11334 11334 1 GTGASGSFK Unmodified 810.38718 0.38718187 377;378;352;379 P16402;Q02539;P22492;P16401;P10412;P16403 HIST1H1D;HIST1H1A;HIST1H1T;HIST1H1B;HIST1H1E;HIST1H1C Histone H1.3;Histone H1.1;Histone H1t;Histone H1.5;Histone H1.4;Histone H1.2 no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 1 1 1 1 26.813 27.961 2 0.0020616 5213 Miao_Sh-H9_proteinG_mass3_141226_03 104.39 48.304 9323.3 333.89 415.11 340.84 31.885 164.92 2282.5 280.81 423.25 366.27 2990.6 0 1693.2 1149 378;377;352;379 1128 10378;10379;10380;10381;10382;10383;10384;10385;10386;10387;10388 11335;11336;11337;11338;11339;11340;11341 11341 7 GTGIVSAPVPK Unmodified 1024.5917 0.59169534 375 P15880;H0YEN5;E9PMM9;E9PQD7;I3L404;E9PM36 RPS2 40S ribosomal protein S2 yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 2 1 1 1 1 1 2 2 1 1 45.107 46.861 2 6.4005E-11 10655 Miao_Sh-H9_proteinG_mass3_141226_03 149.94 104.04 73861 0 1029.4 1051.4 693.44 665.71 20500 1158.1 1992.5 0 22608 154.86 24008 1150 375 1129 10389;10390;10391;10392;10393;10394;10395;10396;10397;10398;10399;10400;10401;10402 11342;11343;11344;11345;11346;11347;11348;11349;11350;11351;11352 11351 11 GTIEILSDVQLIK Unmodified 1427.8235 0.82354577 326 P05388;F8VU65;Q8NHW5;F8VPE8;F8VW21 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 3 1 2 3 5 110.28 98.086 2;3 1.1333E-05 34593 Miao_Sh-H9_proteinG_mass3_141226_01 119.62 79.887 23929 0 0 0 0 0 6989 0 0 0 8456.7 7649.7 833.76 1151 326 1130 10403;10404;10405;10406;10407;10408;10409;10410;10411;10412;10413;10414;10415;10416 11353;11354;11355;11356;11357;11358;11359;11360;11361;11362;11363;11364;11365;11366 11358 14 GTLDPVEK Unmodified 857.44945 0.44944778 356 P11142;E9PKE3;P11142-2;E9PNE6;A8K7Q2;E9PN89 HSPA8 Heat shock cognate 71 kDa protein yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 36.755 37.036 2 0.0053862 3649 Miao_Sh-H9_Flag_mass3_141226_03 101.25 62.977 3876.8 0 720.56 783.65 114.01 0 0 1068 0 1190.6 0 0 0 1152 356 1131 10417;10418;10419;10420;10421 11367;11368;11369;11370;11371 11371 5 GTLSLMPEFK Oxidation (M) 1137.574 0.57399637 647 Q9H0K6;Q9H0K6-2 PUS7L Pseudouridylate synthase 7 homolog-like protein yes no 0 0 1 0 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 1 1 42.978 44.08 2 0.026465 5183 Miao_Sh-H9_Flag_mass3_141226_01 59.908 27.78 68513 9414 7059.7 7087.8 54.002 0 290.08 15228 29379 0 0 0 0 1153 647 1132 10422;10423;10424;10425;10426;10427;10428 11372;11373 11373 84 2 GTLVQTK Unmodified 745.4334 0.43340378 377;378;352;379 P16402;Q02539;P16401;P10412;P16403 HIST1H1D;HIST1H1A;HIST1H1B;HIST1H1E;HIST1H1C Histone H1.3;Histone H1.1;Histone H1.5;Histone H1.4;Histone H1.2 no no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 1 2 2 1 1 1 1 2 1 1 28.015 29.209 2 0.0034671 3221 Miao_Sh-H9_Flag_mass3_141226_01 113.14 45.233 12144 0 589.2 593.31 458.09 441.8 2901.4 0 655.13 640 3162.1 2702.7 0 1154 378;377;352;379 1133 10429;10430;10431;10432;10433;10434;10435;10436;10437;10438;10439;10440;10441 11374;11375;11376;11377;11378;11379;11380;11381;11382;11383 11379 10 GTNESLER Unmodified 904.42502 0.42502394 346 P08670;B0YJC4;B0YJC5;P14136;P14136-2;P14136-3;K7EKH6 VIM;GFAP Vimentin;Glial fibrillary acidic protein yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 31.272 31.884 2 0.015847 2535 Miao_Sh-c_proteinG_mass3_141226_02 83.206 24.225 1853.7 38.198 29.077 0 0 1725.2 0 38.838 22.367 0 0 0 0 1155 346 1134 10442;10443;10444;10445;10446 11384 11384 1 GTQGVVTNFEIFR Unmodified 1466.7518 0.75177781 485 P55884;P55884-2 EIF3B Eukaryotic translation initiation factor 3 subunit B yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 81.939 81.387 2 0.00040026 16837 Miao_Sh-H9_Flag_mass3_141226_01 79.886 66.077 0 0 0 0 0 0 0 0 0 0 0 0 0 1156 485 1135 10447 11385 11385 1 GTVLDQVPVNPSLYLIK Unmodified 1855.0455 0.045500215 682 Q9Y657;Q5JUX0 SPIN1;SPIN3 Spindlin-1;Spindlin-3 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 93.43 93.78 3 0.016168 19317 Miao_Sh-c_Flag_mass3_141226_02 41.386 22.808 0 0 0 0 0 0 0 0 0 0 0 0 0 1157 682 1136 10448 11386 11386 1 GTVTDFPGFDER Unmodified 1339.6044 0.60444487 144 P08758;E9PHT9;D6RCN3;D6RBE9 ANXA5 Annexin A5;Annexin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 66.827 67.178 2 0.010716 19129 Miao_Sh-H9_proteinG_mass3_141226_01 61.235 47.646 0 0 0 0 0 0 0 0 0 0 0 0 0 1158 144 1137 10449 11387 11387 1 GTVVTGTLER Unmodified 1031.5611 0.56112349 465 P49411 TUFM Elongation factor Tu, mitochondrial yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 40.678 42.859 2 0.00013221 9531 Miao_Sh-H9_proteinG_mass3_141226_02 128.03 72.359 7205.4 259.04 280.88 263.17 0 0 2007.3 0 0 0 0 1873.7 2521.4 1159 465 1138 10450;10451;10452;10453;10454;10455 11388;11389;11390;11391;11392;11393;11394 11393 7 GTWVQLK Unmodified 830.46504 0.46503826 458 P46778 RPL21 60S ribosomal protein L21 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 52.187 54.417 2 0.0066837 12494 Miao_Sh-c_proteinG_mass3_141226_03 112.37 55.823 83536 2938.8 3689 0 1776.3 1690.1 19582 0 0 0 21647 16135 16077 1160 458 1139 10456;10457;10458;10459;10460;10461;10462;10463 11395;11396;11397;11398;11399;11400;11401;11402;11403 11395 9 GVAFILFLDK Unmodified 1121.6485 0.64848194 614 Q8TBF4;F8VXY6;G3V1V1 ZCRB1 Zinc finger CCHC-type and RNA-binding motif-containing protein 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 120.25 109.65 2 0.0056052 38488 Miao_Sh-H9_proteinG_mass3_141226_01 82.261 44.702 0 0 0 0 0 0 0 0 0 0 0 0 0 1161 614 1140 10464;10465 11404;11405 11404 2 GVDDLDFFIGDEAIEK Unmodified 1781.836 0.83596095 48 P61158;B4DXW1 ACTR3 Actin-related protein 3 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 94.367 95.72 2 0.023968 22498 Miao_Sh-c_proteinG_mass3_141226_01 43.557 33.105 0 0 0 0 0 0 0 0 0 0 0 0 0 1162 48 1141 10466 11406 11406 1 GVDEVTIVNILTNR Unmodified 1541.8413 0.8413211 337 P07355;P07355-2;H0YMM1;H0YKS4;H0YMD0;H0YMU9;H0YN42;H0YKL9;H0YKZ7;H0YLV6;H0YMT9;H0YKX9;H0YMW4;H0YMD9;H0YKV8 ANXA2 Annexin A2;Annexin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 105.67 96.922 2 0.00052314 36159 Miao_Sh-H9_proteinG_mass3_141226_01 78.69 53.068 6145.4 0 0 0 0 0 549.72 0 1887.5 0 3029.6 678.58 0 1163 337 1142 10467;10468;10469;10470 11407;11408 11408 2 GVDLDQLLDMSYEQLMQLYSAR Unmodified 2587.2298 0.22982488 243 P62841;K7EJ78;K7EQJ5;K7ELC2 RPS15 40S ribosomal protein S15 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 120.52 121.93 3 6.8134E-09 29024 Miao_Sh-c_Flag_mass3_141226_01 72.316 59.868 12251 0 0 3609.7 0 2777.4 0 2599.6 3264.3 0 0 0 0 1164 243 1143 10471;10472;10473;10474;10475 11409;11410;11411;11412 11409 4 GVDNTFADELVELSTALEHQEYITFLEDLK Unmodified 3438.6719 0.67186232 546 Q07021;I3L3Q7;I3L3B0 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 122.22 122.54 3;4 4.659E-21 29533 Miao_Sh-c_Flag_mass3_141226_01 77.469 70.04 15224 7560.7 7137.4 0 0 0 0 0 525.65 0 0 0 0 1165 546 1144 10476;10477;10478;10479 11413;11414 11413 2 GVEAGPDLLQ Unmodified 997.50803 0.50802529 286 O60506-4;O60506-3;O60506-5;H0YAA0 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 2 1 2 1 63.646 63.896 2 0.0055867 17903 Miao_Sh-H9_proteinG_mass3_141226_01 84.054 52.183 7778.8 0 0 0 216.35 0 1760.4 0 0 0 1987.9 2060.5 1753.6 1166 286 1145 10480;10481;10482;10483;10484;10485;10486 11415;11416;11417;11418 11417 4 GVEEQTQAFFEGFNEILPQQYLQYFDAK Unmodified 3338.5772 0.57717407 634 Q96J02;Q96J02-2;Q96J02-3 ITCH E3 ubiquitin-protein ligase Itchy homolog yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 116.47 116.82 3 0.014925 27972 Miao_Sh-c_Flag_mass3_141226_02 27.119 18.044 0 0 0 0 0 0 0 0 0 0 0 0 0 1167 634 1146 10487 11419 11419 1 GVLFASGQNLAR Unmodified 1231.6673 0.6673199 421 P28838;P28838-2;H0Y9Q1 LAP3 Cytosol aminopeptidase yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 59.913 60.402 2 0.00029627 8659 Miao_Sh-c_Flag_mass3_141226_01 115.33 33.355 0 0 0 0 0 0 0 0 0 0 0 0 0 1168 421 1147 10488;10489;10490;10491 11420;11421;11422;11423 11420 4 GVLLFGPPGTGK Unmodified 1141.6495 0.64954457 437 P35998;B7Z5E2 PSMC2 26S protease regulatory subunit 7 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 4 3 1 2 1 71.089 71.439 2 0.0010095 20340 Miao_Sh-H9_proteinG_mass3_141226_02 83.045 30.563 23064 3402.4 3297.2 0 0 0 0 2137.3 11329 1100.8 0 478.32 1319.2 1169 437 1148 10492;10493;10494;10495;10496;10497;10498;10499;10500;10501;10502;10503;10504;10505 11424;11425;11426;11427;11428;11429;11430;11431;11432;11433;11434 11433 11 GVLLYGPPGTGK Unmodified 1157.6445 0.64445919 498 P62195;P62195-2;J3QQM1;J3QLH6;J3KRP2;J3QSA9;J3QRR3;J3QRW1;Q8NB90;Q8NB90-3;Q8NB90-2 PSMC5;SPATA5 26S protease regulatory subunit 8;Spermatogenesis-associated protein 5 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 5 2 2 1 3 5 1 57.189 57.785 2 0.00034883 8551 Miao_Sh-H9_Flag_mass3_141226_02 118.77 66.05 21702 1520.8 510.48 3134.8 0 0 969.09 302.99 11063 2198.7 2002.9 0 0 1170 498 1149 10506;10507;10508;10509;10510;10511;10512;10513;10514;10515;10516;10517;10518;10519;10520;10521;10522;10523;10524;10525 11435;11436;11437;11438;11439;11440;11441;11442;11443;11444;11445;11446;11447;11448;11449;11450 11443 15 GVNIGGAGSYIYEK Unmodified 1426.7092 0.70924429 208 P52943;H0YFA4;P52943-2 CRIP2 Cysteine-rich protein 2 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 1 61.723 63.268 2 0.00018145 10840 Miao_Sh-H9_Flag_mass3_141226_03 82.578 62.374 11189 697.75 1352.2 0 0 0 3055.8 0 0 2579.7 3132.9 0 371 1171 208 1150 10526;10527;10528;10529;10530;10531;10532 11451;11452;11453;11454;11455 11454 5 GVNLPGAAVDLPAVSEK Unmodified 1635.8832 0.88318591 368 P14618;P14618-2;P14618-3;H3BTN5;H3BQ34;Q504U3 PKM;PKM2 Pyruvate kinase PKM;Pyruvate kinase yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 4 3 4 4 2 4 2 7 9 11 5 75.011 72.787 2;3 1.5496E-23 26598 Miao_Sh-H9_proteinG_mass3_141226_02 106.93 85.126 166810 11429 8582.4 13026 5494.6 13041 16192 15544 22318 20264 13597 20164 7157.2 1172 368 1151 10533;10534;10535;10536;10537;10538;10539;10540;10541;10542;10543;10544;10545;10546;10547;10548;10549;10550;10551;10552;10553;10554;10555;10556;10557;10558;10559;10560;10561;10562;10563;10564;10565;10566;10567;10568;10569;10570;10571;10572;10573;10574;10575;10576;10577;10578;10579;10580;10581;10582;10583;10584;10585;10586;10587;10588;10589 11456;11457;11458;11459;11460;11461;11462;11463;11464;11465;11466;11467;11468;11469;11470;11471;11472;11473;11474;11475;11476;11477;11478;11479;11480;11481;11482;11483;11484;11485;11486;11487;11488;11489;11490;11491;11492;11493;11494;11495;11496;11497;11498;11499;11500;11501;11502;11503;11504;11505;11506;11507;11508;11509;11510;11511;11512;11513;11514;11515;11516;11517;11518;11519;11520;11521;11522;11523;11524;11525;11526;11527;11528;11529;11530;11531;11532;11533;11534;11535;11536;11537;11538;11539;11540;11541;11542;11543;11544;11545;11546;11547;11548;11549;11550;11551;11552;11553;11554;11555;11556;11557;11558;11559;11560 11547 104 GVNSYPSLFIFR Unmodified 1398.7296 0.7295858 609 Q8IXB1;Q8IXB1-2;Q8IXB1-3;E7EP04 DNAJC10 DnaJ homolog subfamily C member 10 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS 2 1 1 90.732 95.093 2 1.2885E-06 21751 Miao_Sh-c_proteinG_mass3_141226_02 136.27 101.47 7262.4 0 0 0 0 7262.4 0 0 0 0 0 0 0 1173 609 1152 10590;10591;10592;10593 11561;11562;11563;11564;11565;11566 11564 6 GVNTGAVGSYIYDRDPEGK Unmodified 1996.949 0.94903365 208 P52943;H0YFA4;P52943-2;H0YHD8 CRIP2 Cysteine-rich protein 2 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 55.656 61.521 3 0.028921 15233 Miao_Sh-c_proteinG_mass3_141226_03 36.384 21.396 0 0 0 0 0 0 0 0 0 0 0 0 0 1174 208 1153 10594 11567 11567 1 GVPQIEVTFDIDANGIVHVSAK Unmodified 2308.2063 0.20631097 441 P38646;H0Y8S0 HSPA9 Stress-70 protein, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 6 3 1 1 2 4 106.58 100.93 3 1.3667E-16 37372 Miao_Sh-H9_proteinG_mass3_141226_03 95.195 84.821 57436 3458.7 0 0 9154.7 17124 7905.3 0 0 741.39 11266 0 7785.5 1175 441 1154 10595;10596;10597;10598;10599;10600;10601;10602;10603;10604;10605;10606;10607;10608;10609;10610;10611;10612;10613 11568;11569;11570;11571;11572;11573;11574;11575;11576;11577;11578;11579;11580;11581;11582;11583;11584;11585;11586 11586 19 GVPQIEVTFEIDVNGILR Unmodified 1998.0786 0.078591257 355 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7 12 10 3 15 3 8 5 2 112.68 112.61 2;3 7.1124E-07 26983 Miao_Sh-H9_Flag_mass3_141226_01 78.917 60.526 54043 3289.4 9722.4 14326 1729.7 0 0 2398.8 10029 7723.3 4824.9 0 0 1176 355 1155 10614;10615;10616;10617;10618;10619;10620;10621;10622;10623;10624;10625;10626;10627;10628;10629;10630;10631;10632;10633;10634;10635;10636;10637;10638;10639;10640;10641;10642;10643;10644;10645;10646;10647;10648;10649;10650;10651;10652;10653;10654;10655;10656;10657;10658;10659;10660;10661;10662;10663;10664;10665;10666;10667;10668;10669;10670;10671;10672;10673;10674;10675;10676;10677;10678 11587;11588;11589;11590;11591;11592;11593;11594;11595;11596;11597;11598;11599;11600;11601;11602;11603;11604;11605;11606;11607;11608;11609;11610;11611;11612;11613;11614;11615;11616;11617;11618;11619;11620;11621;11622;11623;11624;11625;11626;11627;11628;11629;11630;11631;11632;11633;11634;11635;11636;11637;11638;11639;11640;11641;11642;11643;11644;11645;11646;11647;11648;11649;11650;11651;11652;11653;11654;11655;11656;11657;11658;11659;11660;11661;11662;11663 11632 77 GVPTGFILPIR Unmodified 1168.6968 0.69682911 358 P11586;F5H2F4;V9GYY3 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 82.811 83.187 2 0.056308 17838 Miao_Sh-H9_Flag_mass3_141226_01 48.998 28.373 1441.8 0 0 246.4 0 0 0 1195.4 0 0 0 0 0 1177 358 1156 10679;10680 11664 11664 0 GVQYLNEIK Unmodified 1062.571 0.5709599 366 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 53.699 56.757 2 0.014425 13818 Miao_Sh-c_proteinG_mass3_141226_03 74.267 30.453 6482.2 0 0 0 0 0 5814.1 0 0 668.1 0 0 0 1178 366 1157 10681;10682 11665 11665 1 GVTFLFPIQAK Unmodified 1219.6965 0.69649476 652 Q9NR30;Q9NR30-2 DDX21 Nucleolar RNA helicase 2 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 87.629 88.698 2 0.013899 18896 Miao_Sh-H9_Flag_mass3_141226_01 63.624 35.42 2534.4 0 298.25 517.87 1718.3 0 0 0 0 0 0 0 0 1179 652 1158 10683;10684;10685;10686 11666;11667 11667 2 GVTFNVTTVDTK Unmodified 1280.6612 0.66123147 263 O00299 CLIC1 Chloride intracellular channel protein 1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 2 2 1 2 2 1 2 1 57.553 58.71 2 0.0001827 15076 Miao_Sh-H9_proteinG_mass3_141226_03 123.28 96.833 37692 919.26 1255.9 0 1773.6 0 5521.7 2246.8 2541.1 0 6642.4 10720 6070.4 1180 263 1159 10687;10688;10689;10690;10691;10692;10693;10694;10695;10696;10697;10698;10699;10700 11668;11669;11670;11671;11672;11673;11674;11675;11676 11675 9 GVTLGFR Unmodified 748.42317 0.42317345 117 P32969;D6RAN4;H0Y9V9;E7ESE0 RPL9 60S ribosomal protein L9 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 2 1 2 3 68.279 63.099 2 6.4197E-11 13278 Miao_Sh-H9_proteinG_mass3_141226_03 143.02 82.22 7743.4 0 0 0 0 0 3444.3 0 0 783.74 0 2708.4 806.94 1181 117 1160 10701;10702;10703;10704;10705;10706;10707;10708 11677;11678;11679;11680;11681;11682 11682 6 GVVDSDDLPLNVSR Unmodified 1484.7471 0.74708636 369 P14625 HSP90B1 Endoplasmin yes yes 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 1 2 1 1 65.689 66.591 2 2.7246E-05 17011 Miao_Sh-c_proteinG_mass3_141226_03 97.223 70.575 5328.6 0 0 786.94 0 0 0 473.98 0 0 1325.6 2742.1 0 1182 369 1161 10709;10710;10711;10712;10713;10714;10715;10716 11683;11684;11685;11686;11687;11688 11685 6 GVVDSEDLPLNISR Unmodified 1512.7784 0.77838649 344;341 P07900;P07900-2;Q86U12;P08238 HSP90AA1;HSP90AB1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta no no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 2 1 2 2 1 2 3 2 71.574 71.159 2;3 2.2197E-53 13475 Miao_Sh-c_proteinG_mass3_141226_02 146.58 124.25 120000 308.29 13330 8482.2 17776 16596 7720.3 20746 0 0 5680.5 8302.9 21061 1183 341;344 1162 10717;10718;10719;10720;10721;10722;10723;10724;10725;10726;10727;10728;10729;10730;10731;10732;10733 11689;11690;11691;11692;11693;11694;11695;11696;11697;11698;11699;11700;11701;11702 11693 13 GVVPLAGTNGETTTQGLDGLSER Unmodified 2271.1343 0.13426824 219 P04075;H3BUH7;H3BPS8;H3BQN4;J3KPS3;P04075-2;H3BMQ8;H3BR04;H3BU78 ALDOA Fructose-bisphosphate aldolase A yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 68.999 67.178 3 3.4549E-05 24662 Miao_Sh-H9_proteinG_mass3_141226_02 55.844 46.987 11102 0 0 1189.9 828.72 0 0 1461.7 599.18 3923.7 3099.2 0 0 1184 219 1163 10734;10735;10736;10737;10738;10739;10740 11703;11704 11704 2 GVVQELQQAISK Unmodified 1298.7194 0.71941505 422 P29692;P29692-2;E9PRY8;P29692-3;E9PK01;E9PMW7;E9PPR1;E9PL12;E9PQ49;E9PI39;E9PN91;E9PIZ1;E9PL71;H0YCK7 EEF1D Elongation factor 1-delta yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 1 1 1 83.809 82.415 2 0.00035058 15535 Miao_Sh-c_Flag_mass3_141226_03 118.73 49.385 9611.6 457.79 0 2042.9 3501.7 0 0 0 3338.7 0 0 270.51 0 1185 422 1164 10741;10742;10743;10744;10745;10746;10747;10748;10749 11705;11706;11707;11708;11709;11710;11711 11706 7 GVVVVIK Unmodified 712.48471 0.48471107 210 P46779;H0YKD8;P46779-2;P46779-3;H0YMF4;P46779-4;P46779-5 RPL28 60S ribosomal protein L28 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 3 1 1 2 2 3 3 52.926 51.752 1;2 0.0047639 11498 Miao_Sh-H9_proteinG_mass3_141226_01 117.56 61.536 82487 1680.3 1575.8 1548.5 0 1260 23080 1686.1 2060.7 2017.7 15684 15041 16853 1186 210 1165 10750;10751;10752;10753;10754;10755;10756;10757;10758;10759;10760;10761;10762;10763;10764;10765;10766;10767;10768 11712;11713;11714;11715;11716;11717;11718;11719;11720;11721;11722;11723;11724;11725;11726;11727;11728;11729;11730;11731;11732;11733;11734;11735;11736;11737;11738;11739;11740;11741;11742;11743;11744;11745;11746 11731 34 GYAFIEFASFEDAK Unmodified 1593.7351 0.73512469 389 P19338;H7BY16 NCL Nucleolin yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS 1 1 3 1 1 1 94.004 94.435 2 0.00028023 20859 Miao_Sh-H9_Flag_mass3_141226_01 85.909 75.265 14665 5620.6 2388.6 997.34 755.98 0 0 4902 0 0 0 0 0 1187 389 1166 10769;10770;10771;10772;10773;10774;10775;10776 11747;11748;11749;11750;11751;11752 11751 6 GYAFNHSADFETVR Unmodified 1612.727 0.72701962 172 P61160;F5H6T1;P61160-2 ACTR2 Actin-related protein 2 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 55.518 58.425 3 0.010289 8481 Miao_Sh-c_proteinG_mass3_141226_01 50.088 39.735 2435.6 0 0 0 589.3 686.62 510.46 0 0 0 649.17 0 0 1188 172 1167 10777;10778;10779;10780 11753 11753 1 GYDVIAQAQSGTGK Unmodified 1393.6838 0.68375782 488 P60842;J3QL43;J3KT12;P60842-2;Q14240;J3KTB5;J3QS69;E7EQG2;Q14240-2;J3QR64;J3QKZ9;J3QLN6;J3KS25;B4E102;J3KS93;J3KSN7;J3KT04;E7EMV8 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 1 2 1 1 1 3 1 1 51.014 52.568 2;3 1.9012E-06 12663 Miao_Sh-H9_proteinG_mass3_141226_01 116.58 84.255 12461 0 0 634.16 318.26 0 3275 1328.3 601.01 0 4995.5 0 1308.5 1189 488 1168 10781;10782;10783;10784;10785;10786;10787;10788;10789;10790;10791 11754;11755;11756;11757;11758;11759;11760;11761 11760 8 GYEEWLLNEIR Unmodified 1420.6987 0.69867961 283;362 O43707;O43707-2;P35609;P35609-2;P12814;P12814-2;P12814-3;P12814-4;H9KV75 ACTN4;ACTN2;ACTN1 Alpha-actinin-4;Alpha-actinin-2;Alpha-actinin-1 no no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching 2 1 1 2 3 1 1 94.087 94.864 2;3 1.4589E-10 22250 Miao_Sh-c_proteinG_mass3_141226_02 149.49 107.3 22640 1042.9 1754.6 1525.5 8684.5 6294.2 0 1917.4 0 0 0 1421.1 0 1190 283;362 1169 10792;10793;10794;10795;10796;10797;10798;10799;10800;10801;10802 11762;11763;11764;11765;11766;11767 11765 6 GYFEYIEENK Unmodified 1290.5768 0.57683314 536 Q00839;Q00839-2;Q5RI18 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 2 2 1 3 1 1 4 2 1 71.399 70.191 2 0.00023765 26063 Miao_Sh-H9_proteinG_mass3_141226_01 125.7 94.32 31277 0 0 1763.8 7545.4 5740.6 7896.1 1214.9 0 577.54 6098.9 0 439.43 1191 536 1170 10803;10804;10805;10806;10807;10808;10809;10810;10811;10812;10813;10814;10815;10816;10817;10818;10819 11768;11769;11770;11771;11772;11773;11774;11775;11776;11777;11778;11779;11780;11781 11776 14 GYGFVHFETQEAAER Unmodified 1739.7903 0.79034816 359 P11940;P11940-2;E7EQV3;E7ERJ7;H0YAR2;H0YBN4;E5RGH3 PABPC1 Polyadenylate-binding protein 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 64.059 63.378 3 0.0019241 10770 Miao_Sh-H9_Flag_mass3_141226_03 59.705 45.96 8385.7 1393.9 0 0 950.86 0 1308.3 2204.2 0 2528.3 0 0 0 1192 359 1171 10820;10821;10822;10823;10824 11782 11782 1 GYISPYFINTSK Unmodified 1388.6976 0.69761697 354 P10809;E7ESH4 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 2 1 2 1 71.111 71.537 2 0.0010746 13337 Miao_Sh-H9_Flag_mass3_141226_01 80.69 47.602 10760 3866.5 0 0 0 0 0 0 1328.3 2337.6 0 0 3227.3 1193 354 1172 10825;10826;10827;10828;10829;10830;10831;10832;10833;10834 11783;11784;11785;11786;11787;11788;11789 11786 7 GYSFSLTTFSPSGK Unmodified 1477.7089 0.70890994 411 P25787;H3BT36 PSMA2 Proteasome subunit alpha type-2 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 78.671 80.075 2 0.00034987 14950 Miao_Sh-c_Flag_mass3_141226_03 76.156 64.837 0 0 0 0 0 0 0 0 0 0 0 0 0 1194 411 1173 10835 11790 11790 1 GYSFTTTAER Unmodified 1131.5197 0.51965261 524 P63261;P60709;I3L3I0;I3L1U9;I3L4N8 ACTG1;ACTB Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 1 4 2 6 2 3 50.072 51.336 2 2.5561E-120 11172 Miao_Sh-H9_proteinG_mass3_141226_02 242.92 193.86 235630 6129.6 5147.3 5722.2 4620.6 4021.4 65025 0 0 10120 891.83 66673 67275 1195 524 1174 10836;10837;10838;10839;10840;10841;10842;10843;10844;10845;10846;10847;10848;10849;10850;10851;10852;10853;10854;10855;10856;10857;10858;10859 11791;11792;11793;11794;11795;11796;11797;11798;11799;11800;11801;11802;11803;11804;11805;11806;11807;11808;11809;11810;11811;11812;11813;11814;11815;11816;11817;11818;11819;11820;11821;11822;11823;11824;11825;11826;11827 11816 37 HADLEIR Unmodified 852.44537 0.44536545 573 Q14764;H3BQK6;H3BRL2;H3BUK7;H3BNF6;H3BP76 MVP Major vault protein yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 33.217 35.193 2 0.020898 6266 Miao_Sh-c_proteinG_mass3_141226_03 93.195 49.079 12619 69.731 0 0 0 776.32 3676 0 88.813 0 3410.9 2234.9 2362.3 1196 573 1175 10860;10861;10862;10863;10864;10865;10866 11828;11829;11830;11831 11829 4 HAEQERDELADEITNSASGK Unmodified 2199.004 0.0039823436 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 4 1 2 51.902 54.337 3;4 1.9177E-09 13208 Miao_Sh-H9_proteinG_mass3_141226_03 82.609 70.117 20987 0 0 0 0 706.27 3893 0 0 1748.1 8415.4 3225 2999.5 1197 434 1176 10867;10868;10869;10870;10871;10872;10873;10874;10875;10876 11832;11833;11834;11835;11836;11837;11838 11837 7 HAFEIIHLLTGENPLQVLVNAIINSGPR Unmodified 3064.6822 0.68218869 256 P46782;M0R0F0;M0R0R2 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 2 1 122.02 122.47 3 2.7674E-27 30111 Miao_Sh-c_Flag_mass3_141226_02 93.981 87.672 0 0 0 0 0 0 0 0 0 0 0 0 0 1198 256 1177 10877;10878;10879 11839;11840;11841 11840 3 HATALEELSEQLEQAK Unmodified 1795.8952 0.89520716 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 2 2 1 3 3 1 1 2 2 1 94.889 91.368 2;3 2.8177E-63 36820 Miao_Sh-H9_proteinG_mass3_141226_03 194.55 176.15 69780 2700.6 2132.7 0 11257 9818.1 6802.1 3829.2 0 0 13856 9562 9822.1 1199 434 1178 10880;10881;10882;10883;10884;10885;10886;10887;10888;10889;10890;10891;10892;10893;10894;10895;10896;10897 11842;11843;11844;11845;11846;11847;11848;11849;11850;11851;11852;11853;11854;11855;11856 11855 14 HAVSEGTK Unmodified 827.41373 0.41373097 37 Q93079;Q99879;Q99877;Q5QNW6;P58876;O60814;P62807;P57053;U3KQK0;B4DR52;Q5QNW6-2;Q99880;Q96A08 HIST1H2BH;HIST1H2BM;HIST1H2BN;HIST2H2BF;HIST1H2BD;HIST1H2BK;HIST1H2BC;H2BFS;HIST1H2BL;HIST1H2BA Histone H2B type 1-H;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-C/E/F/G/I;Histone H2B type F-S;Histone H2B;Histone H2B type 1-L;Histone H2B type 1-A no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 23.581 24.81 2 6.7178E-05 5419 Miao_Sh-H9_proteinG_mass3_141226_01 141.2 77.889 1624.6 0 0 0 0 0 0 0 0 0 1352.3 272.28 0 1200 37 1179 10898;10899 11857 11857 1 HDIAFVEFDNEVQAGAAR Unmodified 1987.9388 0.93880331 260 P09012;M0R268 SNRPA U1 small nuclear ribonucleoprotein A yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 99.842 87.661 3 3.1993E-05 31006 Miao_Sh-H9_proteinG_mass3_141226_01 67.685 58.406 1566.2 0 0 0 0 0 0 0 0 0 1566.2 0 0 1201 260 1180 10900 11858 11858 1 HDSEQDNSDNNTIFVQGLGENVTIESVADYFK Unmodified 3584.6179 0.61792927 435 P35637;P35637-2 FUS RNA-binding protein FUS yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 2 1 1 2 2 1 108.16 105.75 3;4 6.7804E-33 26113 Miao_Sh-H9_Flag_mass3_141226_02 93.125 89.076 38361 6193.4 6175.5 0 0 0 0 0 6607 7158.8 12227 0 0 1202 435 1181 10901;10902;10903;10904;10905;10906;10907;10908;10909 11859;11860;11861;11862;11863;11864 11861 4 HDVVFLITK Unmodified 1070.6124 0.61243078 535 Q00610;Q00610-2 CLTC Clathrin heavy chain 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 61.194 60.291 2 0.0020525 10000 Miao_Sh-H9_Flag_mass3_141226_02 96.009 53.722 0 0 0 0 0 0 0 0 0 0 0 0 0 1203 535 1182 10910 11865 11865 1 HELLQPFNVLYEK Unmodified 1628.8562 0.85624288 669 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 yes yes 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 2 1 2 2 94.085 88.86 2;3 0.00010904 35370 Miao_Sh-H9_proteinG_mass3_141226_01 92.295 68.541 20218 0 470.49 1969.7 2366.5 1742.2 0 0 3068.1 2741.7 5265.3 0 2594 1204 669 1183 10911;10912;10913;10914;10915;10916;10917;10918;10919;10920;10921 11866;11867;11868;11869;11870;11871;11872;11873;11874;11875 11875 10 HFELGGDK Unmodified 901.42938 0.42938104 228 Q969Q0;P83881;J3KQN4;R4GN19;H7BZ11;H0Y5B4 RPL36AL;RPL36A;RPL36A-HNRNPH2 60S ribosomal protein L36a-like;60S ribosomal protein L36a yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 2 1 1 1 4 2 2 49.067 46.149 2 0.00067265 3503 Miao_Sh-H9_Flag_mass3_141226_03 117.89 57.102 26991 887.14 0 866.7 1074.6 0 5587 1030.2 916.78 1009.8 5663.4 5505.8 4449.8 1205 228 1184 10922;10923;10924;10925;10926;10927;10928;10929;10930;10931;10932;10933;10934;10935;10936;10937;10938;10939 11876;11877;11878;11879;11880;11881;11882;11883;11884;11885;11886;11887;11888;11889;11890;11891;11892;11893 11887 18 HFNAPSHIR Unmodified 1077.5468 0.54681083 238 P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;J3KTJ8;J3KSS0 RPL26;KRBA2 60S ribosomal protein L26 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 2 1 1 44.687 42.103 3 6.7991E-14 2989 Miao_Sh-c_Flag_mass3_141226_03 144.77 101.77 5644.7 228.84 326.19 0 270.25 0 2037.7 210.24 303.39 0 1839.6 428.56 0 1206 238 1185 10940;10941;10942;10943;10944;10945;10946;10947;10948;10949;10950 11894;11895;11896;11897;11898;11899;11900;11901;11902;11903;11904 11895 11 HFSVEGQLEFR Unmodified 1347.6571 0.65714914 344;341 P07900;P07900-2;Q86U12;Q14568;Q58FG1;P08238;Q58FF7 HSP90AA1;HSP90AA2;HSP90AA4P;HSP90AB1;HSP90AB3P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A2;Putative heat shock protein HSP 90-alpha A4;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 no no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 4 2 2 2 3 3 3 76.019 71.837 2;3 8.5078E-50 11150 Miao_Sh-H9_Flag_mass3_141226_03 190.57 140.12 44000 3607.9 0 429 2098 2348.2 6160.8 4947.9 7312.1 7494.3 4820.5 2538.2 2243.1 1207 341;344 1186 10951;10952;10953;10954;10955;10956;10957;10958;10959;10960;10961;10962;10963;10964;10965;10966;10967;10968;10969;10970;10971;10972;10973;10974;10975 11905;11906;11907;11908;11909;11910;11911;11912;11913;11914;11915;11916;11917;11918;11919;11920;11921;11922;11923;11924;11925;11926;11927;11928;11929;11930;11931;11932;11933;11934;11935 11924 31 HFYWYLTNEGIQYLR Unmodified 2001.9737 0.97373226 460 P46783;F6U211;S4R435 RPS10;RPS10-NUDT3 40S ribosomal protein S10 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching 2 1 96.805 95.785 3 1.0739E-53 20522 Miao_Sh-c_proteinG_mass3_141226_02 177.36 161.81 0 0 0 0 0 0 0 0 0 0 0 0 0 1208 460 1187 10976;10977;10978 11936;11937;11938 11936 3 HGEIDYEAIVK Unmodified 1272.635 0.63501672 508 P62333 PSMC6 26S protease regulatory subunit 10B yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 56.101 56.05 2 0.039378 8141 Miao_Sh-H9_Flag_mass3_141226_01 47.971 35.396 0 0 0 0 0 0 0 0 0 0 0 0 0 1209 508 1188 10979 11939 11939 1 HGEVCPAGWKPGSDTIKPDVQK Unmodified 2405.1798 0.17977864 545 Q06830 PRDX1 Peroxiredoxin-1 yes yes 0 0 0 0 2 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 1 47.977 49.832 4 0.018201 5922 Miao_Sh-c_proteinG_mass3_141226_02 43.696 39.719 4204 0 0 0 1504.1 1554.7 0 0 0 1145.3 0 0 0 1210 545 1189 10980;10981;10982 11940 11940 1 HGGGGGGFGGGGFGSR Unmodified 1319.5755 0.57554478 108 P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 39.954 39.904 3 0.001384 8467 Miao_Sh-H9_proteinG_mass3_141226_03 60.937 53.674 2732.2 0 0 220.33 0 0 0 410.23 354.48 352.38 1394.8 0 0 + 1211 108 1190 10983;10984;10985;10986;10987;10988 11941;11942 11942 2 HGSGSGQSSSYGPYGSGSGWSSSR Unmodified 2317.9584 0.95842913 112 Q86YZ3;CON__Q86YZ3 HRNR Hornerin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 47.311 48.263 3 1.1933E-05 11802 Miao_Sh-H9_proteinG_mass3_141226_01 56.562 47.503 0 0 0 0 0 0 0 0 0 0 0 0 0 + 1212 112 1191 10989 11943 11943 1 HGSLGFLPR Unmodified 982.53485 0.53484916 443 P39023;H7C422;F8WCR1;H7C3M2 RPL3 60S ribosomal protein L3 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 3 1 1 2 61.487 60.66 2 0.0038896 28041 Miao_Sh-H9_proteinG_mass3_141226_01 88.921 48.652 5336.1 0 0 0 0 0 970.17 1214.3 0 0 2019.7 0 1131.9 1213 443 1192 10990;10991;10992;10993;10994;10995;10996 11944;11945;11946;11947;11948;11949;11950 11948 7 HGSYEDAVHSGALND Unmodified 1570.6648 0.6648133 386 P17987;F5H282;E7EQR6 TCP1 T-complex protein 1 subunit alpha yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 2 42.493 43.806 3 4.1479E-05 9827 Miao_Sh-H9_proteinG_mass3_141226_03 79.875 71.743 5056.7 0 0 476.84 0 0 0 0 478.43 0 2093.5 0 2008 1214 386 1193 10997;10998;10999;11000;11001 11951;11952 11952 2 HGVQELEIELQSQLSK Unmodified 1836.9581 0.95814177 432 P35527;CON__P35527;K7EQQ3 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 15 2 2 1 4 5 7 98.158 90.47 2;3 2.4205E-112 33150 Miao_Sh-H9_proteinG_mass3_141226_01 226.73 175.82 229440 3781.9 0 3588.7 1076.4 21027 51812 0 0 2366.5 62068 35333 48389 + 1215 432 1194 11002;11003;11004;11005;11006;11007;11008;11009;11010;11011;11012;11013;11014;11015;11016;11017;11018;11019;11020;11021;11022;11023;11024;11025;11026;11027;11028;11029;11030;11031;11032;11033;11034;11035;11036;11037;11038;11039;11040 11953;11954;11955;11956;11957;11958;11959;11960;11961;11962;11963;11964;11965;11966;11967;11968;11969;11970;11971;11972;11973;11974;11975;11976;11977;11978;11979;11980;11981;11982;11983;11984;11985;11986;11987;11988;11989;11990;11991;11992;11993;11994;11995;11996;11997;11998;11999;12000;12001;12002;12003;12004;12005;12006;12007;12008;12009 11983 56 HGVVPLATYMR Unmodified 1242.6543 0.65431237 458 P46778;G3V1B3;M0R181 RPL21 60S ribosomal protein L21 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 3 1 2 1 1 1 1 2 57.932 59.167 2;3 1.731E-05 8970 Miao_Sh-c_proteinG_mass3_141226_01 129.85 97.633 14498 0 3437.1 709.86 2771.7 490.6 1172.6 1320.2 1419.4 3176.6 0 0 0 1216 458 1195 11041;11042;11043;11044;11045;11046;11047;11048;11049;11050;11051;11052 12010;12011;12012;12013;12014;12015;12016;12017;12018;12019;12020;12021;12022;12023;12024;12025 12013 15 HGYIGEFEIIDDHR Unmodified 1699.7954 0.79543354 217 P62244;I3L3P7;I3L246;H3BN98 RPS15A 40S ribosomal protein S15a yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 2 2 1 2 80.653 77.997 3;4 1.2752E-12 11525 Miao_Sh-c_proteinG_mass3_141226_01 141.37 117.91 36841 2945.9 1909 1682.7 9284.4 6727.2 0 0 0 798.79 8655.8 4836.9 0 1217 217 1196 11053;11054;11055;11056;11057;11058;11059;11060;11061;11062;11063;11064;11065;11066 12026;12027;12028;12029;12030;12031;12032;12033;12034;12035;12036;12037;12038 12028 13 HHLGAATPENPEIELLR Unmodified 1895.9854 0.98535957 636 Q99417 MYCBP C-Myc-binding protein yes yes 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 61.012 61.011 4 0.0035401 8590 Miao_Sh-c_Flag_mass3_141226_02 49.325 41.01 933.95 0 520.93 0 0 0 0 413.02 0 0 0 0 0 1218 636 1197 11067;11068 12039 12039 1 HHLQPENPGPGGAAPSLEQNR Unmodified 2205.0675 0.067526074 572 Q14684;Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 38.748 43.209 4 0.010606 9442 Miao_Sh-H9_proteinG_mass3_141226_03 36.454 27.172 2325 0 0 0 0 0 1355.1 0 0 0 0 0 969.86 1219 572 1198 11069;11070 12040 12040 1 HHSLGGQYGVQGFPTIK Unmodified 1824.9271 0.92711641 57 Q15084;Q15084-3;F8WA83;B5MCQ5;Q15084-2 PDIA6 Protein disulfide-isomerase A6 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 2 3 1 58.452 58.836 3;4 0.0045754 9545 Miao_Sh-H9_Flag_mass3_141226_02 47.548 32.152 9412.9 0 906.07 714.54 0 1063.4 0 1388.4 3857 0 1483.5 0 0 1220 57 1199 11071;11072;11073;11074;11075;11076;11077;11078;11079 12041;12042;12043 12042 3 HIADLAGNSEVILPVPAFNVINGGSHAGNK Unmodified 3010.5625 0.56246748 333 P06733;P06733-2;K7EM90 ENO1 Alpha-enolase;Enolase yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 1 2 98.385 93.523 3;4 2.9329E-53 17604 Miao_Sh-c_Flag_mass3_141226_01 133.13 121.08 114400 7624.7 10338 0 0 9789.5 12366 14337 20855 0 25947 0 13144 1221 333 1200 11080;11081;11082;11083;11084;11085;11086;11087;11088;11089 12044;12045;12046;12047;12048;12049;12050;12051;12052;12053;12054;12055;12056;12057;12058;12059 12046 15 HIDFSLR Unmodified 886.4661 0.4661009 459 P46781 RPS9 40S ribosomal protein S9 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 1 2 99.381 86.273 2 6.3787E-25 30153 Miao_Sh-H9_proteinG_mass3_141226_02 183.9 65.211 10816 0 0 0 0 0 0 0 0 0 0 6475.7 4340.2 1222 459 1201 11090;11091;11092 12060;12061;12062;12063;12064;12065;12066;12067;12068 12062 9 HIHITQATETTTTR Unmodified 1608.822 0.82198264 571 Q14677;Q14677-2;Q14677-3 CLINT1 Clathrin interactor 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 33.803 33.352 3 0.00013348 3204 Miao_Sh-H9_Flag_mass3_141226_03 80.287 58.294 235.72 0 0 0 0 0 0 0 0 235.72 0 0 0 1223 571 1202 11093 12069 12069 1 HILGFDTGDAVLNEAAQILR Unmodified 2152.1277 0.12766671 670 Q9Y224 C14orf166 UPF0568 protein C14orf166 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 2 1 1 2 1 108.28 105.8 2;3 1.1043E-46 26406 Miao_Sh-H9_Flag_mass3_141226_02 160.64 105.2 25295 5270.7 3408.7 0 7903.9 0 1315 7396.6 0 0 0 0 0 1224 670 1203 11094;11095;11096;11097;11098;11099;11100;11101;11102;11103;11104 12070;12071;12072;12073;12074;12075;12076;12077;12078;12079 12077 9 HIYYITGETK Unmodified 1223.6186 0.61863837 341 P07900;P07900-2;Q86U12;Q58FG0 HSP90AA1;HSP90AA5P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 42.005 44.962 2 0.050984 10038 Miao_Sh-H9_proteinG_mass3_141226_03 48.998 25.644 0 0 0 0 0 0 0 0 0 0 0 0 0 1225 341 1204 11105 12080 12080 1 HLEINPDHPIVETLR Unmodified 1781.9424 0.94243213 344 P08238 HSP90AB1 Heat shock protein HSP 90-beta yes yes 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 1 2 2 5 5 3 63.176 62.651 3;4 8.4336E-39 8600 Miao_Sh-c_Flag_mass3_141226_03 174.59 146.92 68917 3923.2 0 15178 16770 16624 0 5268.7 1283.2 4713.5 4720.1 436.24 0 1226 344 1205 11106;11107;11108;11109;11110;11111;11112;11113;11114;11115;11116;11117;11118;11119;11120;11121;11122;11123;11124;11125;11126;11127;11128;11129;11130;11131;11132;11133 12081;12082;12083;12084;12085;12086;12087;12088;12089;12090;12091;12092;12093;12094;12095;12096;12097;12098;12099 12081 17 HLEINPDHSIIETLR Unmodified 1785.9373 0.93734675 341 P07900;P07900-2 HSP90AA1 Heat shock protein HSP 90-alpha yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 3 2 3 2 1 1 1 1 2 1 73.036 72.307 3;4 1.0213E-16 11873 Miao_Sh-c_proteinG_mass3_141226_01 101.61 77.674 35337 3950 4240.3 0 6951.9 4345 1063.6 0 5345.1 3817.5 4348.3 0 1275.5 1227 341 1206 11134;11135;11136;11137;11138;11139;11140;11141;11142;11143;11144;11145;11146;11147;11148;11149;11150 12100;12101;12102;12103;12104;12105;12106;12107;12108;12109;12110;12111;12112 12103 12 HLIPAANTGESK Unmodified 1236.6463 0.64625011 500 P62258;P62258-2 YWHAE 14-3-3 protein epsilon yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 33.595 35.441 3 0.0011921 7149 Miao_Sh-H9_proteinG_mass3_141226_01 81.09 62.465 2172.7 0 0 120.55 0 0 230.16 0 114.26 0 937.34 159.9 610.53 1228 500 1207 11151;11152;11153;11154;11155;11156 12113;12114 12113 2 HLNDDVVK Unmodified 938.48214 0.48214489 543 Q03135;C9JKI3;E9PCT5;Q03135-2 CAV1 Caveolin-1;Caveolin yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 2 1 1 2 3 1 1 29.451 30.15 2 0.00072066 2940 Miao_Sh-H9_Flag_mass3_141226_03 123.86 69.703 4035.1 618.67 658.19 587.89 0 56.512 77.986 612.9 655 671.9 96.07 0 0 1229 543 1208 11157;11158;11159;11160;11161;11162;11163;11164;11165;11166;11167;11168;11169 12115;12116;12117;12118;12119;12120;12121 12121 7 HLPSTEPDPHVVR Unmodified 1482.7579 0.75792582 643 Q9BUJ2;Q9BUJ2-2;B7Z4B8;Q9BUJ2-4;M0R3F1;M0QYZ0;M0QYI8;M0QYM5 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 2 3 1 3 1 4 4 5 49.161 48.24 2;3;4 5.9139E-18 7786 Miao_Sh-c_proteinG_mass3_141226_03 155.47 124.79 63310 0 0 93.298 1651.8 1495.3 14377 164.77 3057.6 82.48 11995 14506 15888 1230 643 1209 11170;11171;11172;11173;11174;11175;11176;11177;11178;11179;11180;11181;11182;11183;11184;11185;11186;11187;11188;11189;11190;11191;11192;11193;11194;11195 12122;12123;12124;12125;12126;12127;12128;12129;12130;12131;12132;12133;12134;12135;12136;12137;12138;12139;12140;12141;12142;12143;12144;12145;12146;12147;12148;12149;12150;12151;12152;12153;12154;12155;12156;12157;12158;12159 12132 38 HLQLAIR Unmodified 849.51847 0.51847082 320;376;350 Q6FI13;P0C0S8;Q9BTM1;Q16777;Q99878;Q93077;Q7L7L0;P04908;Q96KK5;P20671;H0YFX9;Q9BTM1-2;P16104;Q96QV6;P0C0S5;Q71UI9;C9J0D1;Q71UI9-3;Q71UI9-4;Q71UI9-2;C9J386 HIST2H2AA3;HIST1H2AG;H2AFJ;HIST2H2AC;HIST1H2AJ;HIST1H2AC;HIST3H2A;HIST1H2AB;HIST1H2AH;HIST1H2AD;H2AFX;HIST1H2AA;H2AFZ;H2AFV Histone H2A type 2-A;Histone H2A type 1;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-J;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A type 1-H;Histone H2A type 1-D;Histone H2A;Histone H2AX;Histone H2A type 1-A;Histone H2A.Z;Histone H2A.V no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 1 2 2 2 2 57.295 54.982 2 2.6038E-07 29921 Miao_Sh-H9_proteinG_mass3_141226_03 158.38 50.635 106270 2967.6 2340 2708.8 2717.1 1944.4 24269 4473.9 0 0 22937 18999 22912 1231 320;376;350 1210 11196;11197;11198;11199;11200;11201;11202;11203;11204;11205;11206;11207;11208;11209;11210;11211 12160;12161;12162;12163;12164;12165;12166;12167;12168;12169;12170;12171;12172;12173;12174;12175;12176;12177;12178;12179;12180;12181;12182;12183;12184;12185;12186;12187;12188;12189;12190;12191;12192;12193;12194;12195;12196;12197 12195 38 HLTDAYFK Unmodified 993.49198 0.4919813 542 Q02878 RPL6 60S ribosomal protein L6 yes yes 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 1 2 2 1 65.721 61.048 2 0.0062648 5717 Miao_Sh-H9_Flag_mass3_141226_02 99.139 66.784 26851 840.35 531.13 864.27 0 0 3055.6 1949.6 1501.9 1501.9 8922.6 3518.4 4165.4 1232 542 1211 11212;11213;11214;11215;11216;11217;11218;11219;11220;11221;11222;11223;11224 12198;12199;12200;12201;12202;12203;12204;12205;12206;12207;12208;12209;12210;12211;12212;12213 12207 16 HLVDEPQNLIK Unmodified 1304.7089 0.70885036 99 CON__P02769 yes yes 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 1 1 3 1 2 1 2 52.691 53.98 2;3 0.00042405 12438 Miao_Sh-c_proteinG_mass3_141226_03 104.22 47.189 21114 2369.8 0 342.73 79.563 1412.2 2619.2 2394.2 6350.6 2613.9 2591.6 0 340.28 + 1233 99 1212 11225;11226;11227;11228;11229;11230;11231;11232;11233;11234;11235;11236;11237;11238;11239;11240;11241;11242 12214;12215;12216;12217;12218;12219;12220;12221;12222;12223;12224;12225 12217 12 HLWDYTFGPEK Unmodified 1391.651 0.65100113 172 P61160;F5H6T1;P61160-2 ACTR2 Actin-related protein 2 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 68.854 70.207 3 0.020854 13134 Miao_Sh-c_proteinG_mass3_141226_01 53.237 35.164 0 0 0 0 0 0 0 0 0 0 0 0 0 1234 172 1213 11243 12226 12226 1 HNAVNATLIDSWVDIAIFQLK Unmodified 2367.2587 0.25868089 8 Q13155;A8MU58;F8W950 AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 112.27 112.55 3 0.000752 29747 Miao_Sh-H9_Flag_mass3_141226_03 49.66 43.057 3397.9 186.94 0 932.72 0 0 0 0 0 2278.3 0 0 0 1235 8 1214 11244;11245;11246 12227 12227 0 HPELFEALGIAQPK Unmodified 1548.83 0.83002813 498 P62195;P62195-2;J3QQM1;J3QLH6;J3KRP2;J3QSA9;J3QRR3;J3QRW1;J3QSE0 PSMC5 26S protease regulatory subunit 8 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 2 1 1 1 82.497 76.993 3 3.5965E-10 15787 Miao_Sh-H9_Flag_mass3_141226_03 140.14 118.37 11149 0 3194.1 0 2035.6 0 0 0 0 4548.6 533.27 0 837.13 1236 498 1215 11247;11248;11249;11250;11251;11252;11253;11254 12228;12229;12230;12231;12232 12231 5 HPGSFDVVHVK Unmodified 1220.6302 0.63020611 511 P62701;P22090;C9JEH7 RPS4X;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 1 42.203 43.297 3 0.041474 4804 Miao_Sh-H9_Flag_mass3_141226_01 40.154 27.627 6686 270.87 0 307.62 0 0 1981.2 425.63 765.24 0 2935.3 0 0 1237 511 1216 11255;11256;11257;11258;11259;11260 12233 12233 1 HPYFYAPELLYYANK Unmodified 1887.9196 0.91957142 99 CON__P02769 yes yes 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 86.704 86.704 3 0.0075455 17133 Miao_Sh-c_Flag_mass3_141226_01 50.088 35.811 1294.8 1294.8 0 0 0 0 0 0 0 0 0 0 0 + 1238 99 1217 11261 12234 12234 1 HQEGEIFDTEK Unmodified 1331.5994 0.59935949 542 Q02878 RPL6 60S ribosomal protein L6 yes yes 0 0 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 1 1 1 4 2 2 42.694 44.39 2;3 6.4825E-22 8984 Miao_Sh-H9_proteinG_mass3_141226_03 164.68 100.48 36519 0 0 471.67 0 431.88 6467 720.82 641.52 646.29 5702.3 9933.2 11504 1239 542 1218 11262;11263;11264;11265;11266;11267;11268;11269;11270;11271;11272;11273;11274;11275;11276;11277 12235;12236;12237;12238;12239;12240;12241;12242;12243;12244;12245;12246;12247;12248;12249;12250;12251;12252;12253 12252 19 HQGGWTDGGSGGGGGYQDGGYR Unmodified 2124.8634 0.86340654 612 Q8NCA5;Q8NCA5-2;B4DT23 FAM98A Protein FAM98A yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 43.638 44.59 3 0.00081327 10576 Miao_Sh-H9_proteinG_mass3_141226_01 48.255 42.754 0 0 0 0 0 0 0 0 0 0 0 0 0 1240 612 1219 11278 12254 12254 1 HQQLLEEK Unmodified 1023.5349 0.53490874 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 31.201 32.229 2 0.011927 5988 Miao_Sh-H9_proteinG_mass3_141226_02 88.392 52.566 1447.3 0 85.402 0 0 0 0 0 0 0 0 1361.9 0 1241 434 1220 11279;11280 12255 12255 1 HRDYETATLSDIK Unmodified 1547.758 0.7579854 283 O43707;O43707-2 ACTN4 Alpha-actinin-4 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 2 58.122 55.114 3 5.1043E-05 10077 Miao_Sh-c_proteinG_mass3_141226_03 90.707 66.773 7036.8 485.29 496.26 342.72 0 0 0 1135.1 942.3 0 3212.9 422.23 0 1242 283 1221 11281;11282;11283;11284;11285;11286;11287;11288;11289 12256;12257;12258;12259;12260 12256 5 HRPELIEYDK Unmodified 1298.6619 0.66190017 283 O43707;K7EJH8 ACTN4 Alpha-actinin-4 yes no 0 0 0 0 1 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 1 1 2 1 2 1 53.665 51.808 3 0.0036942 27418 Miao_Sh-H9_proteinG_mass3_141226_01 85.963 47.181 6353.8 0 0 295.58 448.1 0 0 683.41 0 0 0 4926.7 0 1243 283 1222 11290;11291;11292;11293;11294;11295;11296;11297 12261;12262;12263;12264;12265;12266 12265 5 HSGNITFDEIVNIAR Unmodified 1684.8533 0.85328277 424 P30050;P30050-2 RPL12 60S ribosomal protein L12 yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 4 2 1 2 2 1 5 2 92.238 88.859 2;3 1.5376E-22 35153 Miao_Sh-c_proteinG_mass3_141226_03 158.35 127.14 75918 5646.8 508.21 732.46 12087 6391.1 7717.6 7323.9 12962 0 8381.2 901.06 13267 1244 424 1223 11298;11299;11300;11301;11302;11303;11304;11305;11306;11307;11308;11309;11310;11311;11312;11313;11314;11315;11316;11317;11318;11319 12267;12268;12269;12270;12271;12272;12273;12274;12275;12276;12277;12278;12279;12280;12281;12282;12283;12284;12285;12286;12287;12288 12274 22 HSGPNSADSANDGFVR Unmodified 1629.7132 0.71316047 472 P52597 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 35.959 37.954 3 0.00017331 7379 Miao_Sh-H9_proteinG_mass3_141226_03 69.805 49.599 4447.3 45.197 0 348.3 0 0 1240.1 0 0 0 1660.4 0 1153.2 1245 472 1224 11320;11321;11322;11323;11324 12289;12290;12291 12290 3 HSQAVEELAEQLEQTK Unmodified 1838.901 0.90102082 433 P35579 MYH9 Myosin-9 yes yes 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 1 4 6 4 5 4 2 5 7 2 15 82.8 79.472 2;3 2.0652E-200 21207 Miao_Sh-H9_proteinG_mass3_141226_01 263.47 222.25 379770 1698.1 755.97 17376 44272 33598 52161 17807 18500 8193.2 85891 31511 68005 1246 433 1225 11325;11326;11327;11328;11329;11330;11331;11332;11333;11334;11335;11336;11337;11338;11339;11340;11341;11342;11343;11344;11345;11346;11347;11348;11349;11350;11351;11352;11353;11354;11355;11356;11357;11358;11359;11360;11361;11362;11363;11364;11365;11366;11367;11368;11369;11370;11371;11372;11373;11374;11375;11376;11377;11378;11379;11380;11381;11382 12292;12293;12294;12295;12296;12297;12298;12299;12300;12301;12302;12303;12304;12305;12306;12307;12308;12309;12310;12311;12312;12313;12314;12315;12316;12317;12318;12319;12320;12321;12322;12323;12324;12325;12326;12327;12328;12329;12330;12331;12332;12333;12334;12335;12336;12337;12338;12339;12340;12341;12342;12343;12344;12345;12346;12347;12348;12349;12350;12351;12352;12353;12354;12355;12356;12357;12358;12359;12360;12361;12362;12363;12364;12365;12366;12367;12368;12369;12370;12371;12372;12373;12374;12375;12376;12377;12378;12379 12334 88 HSQAVEELAEQLEQTKR Unmodified 1995.0021 0.0021318501 433 P35579 MYH9 Myosin-9 yes yes 0 0 0 0 1 By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 2 1 2 1 1 2 2 82.725 79.152 3;4 2.0895E-11 31775 Miao_Sh-H9_proteinG_mass3_141226_01 126.84 105.42 38985 0 932.85 0 4780.2 1021.8 15275 1166.8 2176.1 0 9356.4 4275.8 0 1247 433 1226 11383;11384;11385;11386;11387;11388;11389;11390;11391;11392;11393;11394 12380;12381;12382;12383;12384;12385;12386;12387;12388;12389 12386 9 HSQFIGYPITLFVEK Unmodified 1777.9403 0.94030686 341 P07900;P07900-2;Q86U12;G3V2J8;Q58FG0 HSP90AA1;HSP90AA5P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 2 88.324 91.849 3 0.0015039 20585 Miao_Sh-c_proteinG_mass3_141226_02 63.682 53.61 0 0 0 0 0 0 0 0 0 0 0 0 0 1248 341 1227 11395;11396;11397 12390;12391;12392 12391 3 HSQFLGYPITLYLEK Unmodified 1807.9509 0.95087155 590 Q58FF8 HSP90AB2P Putative heat shock protein HSP 90-beta 2 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 1 1 2 91.097 89.282 3 2.9028E-05 19011 Miao_Sh-H9_Flag_mass3_141226_01 80.508 62.546 15988 0 2736.4 3044.9 3292.1 0 0 0 5927.1 0 987.05 0 0 1249 590 1228 11398;11399;11400;11401;11402;11403;11404;11405;11406;11407 12393;12394;12395;12396;12397;12398;12399;12400;12401;12402;12403 12399 11 HSSLITPLQAVAQR Unmodified 1519.8471 0.84707518 533 P78527;E7EUY0;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 2 1 1 64.114 65.176 3 0.0062142 11583 Miao_Sh-H9_Flag_mass3_141226_03 55.604 45.178 4822.6 0 0 649.03 0 0 0 0 1561.7 764.85 0 927.57 919.45 1250 533 1229 11408;11409;11410;11411;11412;11413 12404;12405 12405 2 HTFSGVASVESSSGEAFHVGK Unmodified 2118.997 0.99704647 103 CON__P12763 yes yes 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching 4 1 1 2 1 3 63.607 62.576 3;4 6.0698E-14 9836 Miao_Sh-H9_Flag_mass3_141226_02 101.23 86.462 12826 0 2071.2 0 220.02 1342.8 0 3587.1 3067.1 0 2537.3 0 0 + 1251 103 1230 11414;11415;11416;11417;11418;11419;11420;11421;11422;11423;11424;11425 12406;12407;12408;12409;12410;12411;12412;12413 12411 8 HTGPNSPDTANDGFVR Unmodified 1683.7601 0.76011066 199 P31943;G8JLB6;E9PCY7;D6RIU0;D6RBM0;P55795;E5RGH4;E5RGV0;D6RFM3;E7EQJ0;D6RAM1;D6R9T0;D6RIT2;D6RDU3;D6RJ04;D6RIH9;H0YAQ2 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2;Heterogeneous nuclear ribonucleoprotein H2, N-terminally processed yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 2 1 2 1 1 40.101 40.689 3 3.5804E-30 4443 Miao_Sh-H9_Flag_mass3_141226_01 162.64 130.39 10410 485.65 498.73 574.5 279.26 0 0 850.13 0 1346.9 0 6375 0 1252 199 1231 11426;11427;11428;11429;11430;11431;11432;11433;11434;11435;11436 12414;12415;12416;12417;12418;12419;12420;12421;12422;12423;12424;12425;12426 12422 13 HTLEQHNWNIEAAVQDR Unmodified 2059.9824 0.98239946 630 Q96CS3;D6RBG6 FAF2 FAS-associated factor 2 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 1 2 1 57.486 58.488 3;4 4.1655E-06 8463 Miao_Sh-c_Flag_mass3_141226_01 90.453 66.038 11357 1436.3 1824.3 0 1062.3 497.74 0 2042.4 3193.3 0 0 1300.5 0 1253 630 1232 11437;11438;11439;11440;11441;11442;11443;11444 12427;12428;12429 12427 3 HTLNQIDSVK Unmodified 1153.6091 0.60913632 103 CON__P12763 yes yes 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 1 33.391 33.822 2 0.00088347 3795 Miao_Sh-c_Flag_mass3_141226_01 118.87 67.104 687.07 306.28 261.73 0 14.147 0 0 20.042 0 0 0 84.884 0 + 1254 103 1233 11445;11446;11447;11448;11449;11450;11451 12430;12431;12432 12430 3 HVFGESDELIGQK Unmodified 1457.7151 0.71505795 487 P60174;P60174-4;P60174-1;U3KQF3;U3KPZ0;U3KPS5 TPI1 Triosephosphate isomerase yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 1 1 1 52.705 54.941 3 3.9405E-05 6831 Miao_Sh-c_proteinG_mass3_141226_02 89.301 56.212 7372.9 0 0 0 1319.3 0 1623.6 0 0 1550.6 589.08 0 2290.4 1255 487 1234 11452;11453;11454;11455;11456;11457 12433;12434;12435 12434 3 HVLTTLGEK Unmodified 996.5604 0.56039521 370 P14649 MYL6B Myosin light chain 6B yes yes 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 2 2 1 2 1 1 1 1 1 35.878 36.927 2 3.7123E-07 7686 Miao_Sh-H9_proteinG_mass3_141226_01 143.39 100.52 29374 812.61 580.43 694.49 498.25 0 5782.2 810.56 801.31 922.54 7717.3 5196.8 5557.5 1256 370 1235 11458;11459;11460;11461;11462;11463;11464;11465;11466;11467;11468;11469;11470;11471 12436;12437;12438;12439;12440;12441;12442;12443;12444;12445;12446;12447;12448;12449;12450 12446 15 HVLVTLGEK Unmodified 994.58113 0.58113065 179;198 P60660;P60660-2;F8W1R7;G3V1V0;B7Z6Z4;G3V1Y7;F8VPF3;F8VZU9;F8W180;H0YI43;F8VXL3;J3KND3;G8JLA2 MYL6;PDE6H Myosin light polypeptide 6 no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 1 1 1 1 3 2 3 51.147 49.234 2 1.198E-79 9562 Miao_Sh-H9_proteinG_mass3_141226_02 224.86 151.63 1012700 31974 27827 24012 28099 24884 0 48421 48563 48356 311620 210030 208870 1257 179;198 1236 11472;11473;11474;11475;11476;11477;11478;11479;11480;11481;11482;11483;11484;11485;11486;11487;11488;11489 12451;12452;12453;12454;12455;12456;12457;12458;12459;12460;12461;12462;12463;12464;12465;12466;12467;12468;12469;12470;12471;12472;12473;12474;12475;12476;12477;12478;12479;12480;12481;12482;12483;12484;12485;12486;12487;12488;12489;12490;12491;12492;12493;12494;12495;12496;12497;12498;12499;12500;12501;12502;12503;12504;12505;12506;12507;12508;12509;12510;12511;12512;12513;12514;12515;12516;12517;12518;12519;12520;12521;12522;12523 12495 73 HVVFIAQR Unmodified 968.55558 0.55558461 496 P62081;B5MCP9 RPS7 40S ribosomal protein S7 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 2 2 1 1 1 4 3 3 54.402 52.35 2 0.00019797 3996 Miao_Sh-c_Flag_mass3_141226_02 138.37 112.54 49575 1573.9 1056.7 1130.7 994.45 1080.4 8312.3 1613.2 1803.2 2062.7 11351 9628.2 8968.5 1258 496 1237 11490;11491;11492;11493;11494;11495;11496;11497;11498;11499;11500;11501;11502;11503;11504;11505;11506;11507;11508;11509;11510;11511 12524;12525;12526;12527;12528;12529;12530;12531;12532;12533;12534;12535;12536;12537;12538;12539;12540;12541;12542;12543;12544;12545;12546;12547;12548;12549;12550;12551 12526 28 HVVPNEVVVQR Unmodified 1274.7095 0.70951906 329 P06396;P06396-2;P06396-4;P06396-3;CON__Q3SX14;Q5T0I0;Q5T0I1 GSN Gelsolin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 2 3 2 1 3 2 39.929 41.699 2;3 0.00052158 9022 Miao_Sh-H9_proteinG_mass3_141226_03 108.47 80.293 8411.4 190.78 0 172.96 202.3 311.51 514.83 0 363.41 0 4009.3 0 2646.3 + 1259 329 1238 11512;11513;11514;11515;11516;11517;11518;11519;11520;11521;11522;11523;11524;11525;11526;11527 12552;12553;12554;12555;12556;12557;12558;12559 12559 8 HWGGNVLGPK Unmodified 1063.5563 0.55631289 509 P62424;Q5T8U2 RPL7A 60S ribosomal protein L7a yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 2 1 2 2 1 1 64.157 61.029 2 0.0064899 4715 Miao_Sh-c_Flag_mass3_141226_02 79.148 55.118 13605 110.06 0 331.74 92.471 1708 4516.4 0 672.61 0 3426.3 0 2747.3 1260 509 1239 11528;11529;11530;11531;11532;11533;11534;11535;11536;11537;11538;11539 12560;12561;12562;12563;12564;12565;12566;12567 12560 8 HYCTVANPVSR Unmodified 1302.6139 0.61390412 573 Q14764;H3BQK6;H3BRL2;H3BUK7;H3BNF6;H3BP76 MVP Major vault protein yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 2 3 1 2 2 1 1 4 5 3 42.368 42.037 2;3 3.1723E-06 7504 Miao_Sh-H9_proteinG_mass3_141226_03 135.16 107.57 58825 0 0 70.485 1083.5 1023.3 7112.5 92.527 51.41 25.02 19542 10518 19306 1261 573 1240 11540;11541;11542;11543;11544;11545;11546;11547;11548;11549;11550;11551;11552;11553;11554;11555;11556;11557;11558;11559;11560;11561;11562;11563 12568;12569;12570;12571;12572;12573;12574;12575;12576;12577;12578;12579;12580;12581;12582;12583;12584;12585;12586;12587;12588;12589;12590;12591 12591 24 HYFQNTQGLIFVVDSNDR Unmodified 2152.0338 0.033766329 387;170 P61204;P84077;F5H423;P84085;F5H0C7;C9J1Z8;P18085;C9JPM4;C9JAK5 ARF3;ARF1;ARF5;ARF4 ADP-ribosylation factor 3;ADP-ribosylation factor 1;ADP-ribosylation factor 5;ADP-ribosylation factor 4 no no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 78.936 78.384 3 0.00052162 15745 Miao_Sh-c_proteinG_mass3_141226_02 57.708 44.868 7233.4 0 0 1290.6 2581.1 2726.9 0 0 0 0 0 634.73 0 1262 170;387 1241 11564;11565;11566;11567;11568 12592;12593 12592 2 HYFQNTQGLIFVVDSNDRER Unmodified 2437.1775 0.17747045 387;170 P61204;P84077;F5H423;P84085;F5H0C7;C9J1Z8;P18085;C9JPM4;C9JAK5 ARF3;ARF1;ARF5;ARF4 ADP-ribosylation factor 3;ADP-ribosylation factor 1;ADP-ribosylation factor 5;ADP-ribosylation factor 4 no no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 108.55 96.37 4 0.00076462 34522 Miao_Sh-H9_proteinG_mass3_141226_01 57.366 26.277 2323.7 0 0 0 0 0 0 0 0 0 2323.7 0 0 1263 170;387 1242 11569 12594 12594 0 HYWEVDVTGK Unmodified 1232.5826 0.58258722 167 P19474;F5H012;P19474-2 TRIM21 E3 ubiquitin-protein ligase TRIM21 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 2 1 1 1 49.685 50.196 2 0.0042712 6788 Miao_Sh-c_Flag_mass3_141226_02 88.596 64.566 16108 0 1572.4 0 0 0 0 517.82 918.53 0 1084.9 12015 0 1264 167 1243 11570;11571;11572;11573;11574;11575 12595;12596 12595 2 IAAYLFK Unmodified 824.47963 0.47962569 535 Q00610;Q00610-2;J3KS13;K7EJJ5;J3KRF5 CLTC Clathrin heavy chain 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 60.909 60.858 2 0.041798 9795 Miao_Sh-H9_Flag_mass3_141226_01 75.311 24.274 5147.1 0 0 0 0 0 0 2926.1 0 2220.9 0 0 0 1265 535 1244 11576;11577;11578 12597;12598 12597 2 IADGYEQAAR Unmodified 1092.52 0.51998696 66 P48643;E7ENZ3;B7ZAR1;E9PCA1;P48643-2 CCT5 T-complex protein 1 subunit epsilon yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching 2 1 2 2 1 1 37.207 37.633 2 0.0024474 3778 Miao_Sh-c_Flag_mass3_141226_01 107.11 68.81 1746.8 61.092 0 0 0 0 0 57.219 410.05 0 563.29 475.28 179.83 1266 66 1245 11579;11580;11581;11582;11583;11584;11585;11586;11587 12599;12600;12601 12599 3 IAEFTTNLTEEEEK Unmodified 1652.7781 0.77811172 433 P35579 MYH9 Myosin-9 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5 4 3 2 3 7 5 6 4 3 11 5 63.779 63.609 2;3 1.4487E-146 16612 Miao_Sh-H9_proteinG_mass3_141226_02 244.44 211.51 356700 1485.7 10084 7062.2 25395 26899 62195 1490.9 24844 20486 63545 44801 68417 1267 433 1246 11588;11589;11590;11591;11592;11593;11594;11595;11596;11597;11598;11599;11600;11601;11602;11603;11604;11605;11606;11607;11608;11609;11610;11611;11612;11613;11614;11615;11616;11617;11618;11619;11620;11621;11622;11623;11624;11625;11626;11627;11628;11629;11630;11631;11632;11633;11634;11635;11636;11637;11638;11639;11640;11641;11642;11643;11644;11645 12602;12603;12604;12605;12606;12607;12608;12609;12610;12611;12612;12613;12614;12615;12616;12617;12618;12619;12620;12621;12622;12623;12624;12625;12626;12627;12628;12629;12630;12631;12632;12633;12634;12635;12636;12637;12638;12639;12640;12641;12642;12643;12644;12645;12646;12647;12648;12649;12650;12651;12652;12653;12654;12655;12656;12657;12658;12659;12660;12661;12662;12663;12664;12665;12666;12667;12668;12669;12670;12671;12672;12673 12651 71 IAFAITAIK Unmodified 946.58515 0.5851534 503 P62269 RPS18 40S ribosomal protein S18 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 1 2 1 2 1 4 76.55 74.843 2 0.0004775 13990 Miao_Sh-c_proteinG_mass3_141226_01 120.31 65.194 101440 6212.8 5549.1 4928.3 12501 4024 9065.9 8876.3 7797.5 7828 16648 9204.3 8806.1 1268 503 1247 11646;11647;11648;11649;11650;11651;11652;11653;11654;11655;11656;11657;11658;11659;11660;11661;11662;11663 12674;12675;12676;12677;12678;12679;12680;12681;12682;12683;12684;12685;12686;12687;12688;12689;12690;12691;12692;12693;12694;12695;12696;12697;12698;12699;12700;12701;12702;12703;12704;12705;12706;12707 12679 34 IAFWDDVYGFKMSCMKK Oxidation (M);QQTGG (K) 2612.1862 0.18618593 287 O60678;O60678-2 PRMT3 Protein arginine N-methyltransferase 3 yes no 0 0 1 1 2 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 107.45 109.1 3 0.016454 27617 Miao_Sh-c_proteinG_mass3_141226_01 40.616 32.61 0 0 0 0 0 0 0 0 0 0 0 0 0 1269 287 1248 11664 12708 12708 36 1 1 IAGEASR Unmodified 702.36605 0.3660525 37 Q93079;Q99879;Q99877;Q5QNW6;P58876;O60814;P62807;P57053;U3KQK0;B4DR52;Q5QNW6-2 HIST1H2BH;HIST1H2BM;HIST1H2BN;HIST2H2BF;HIST1H2BD;HIST1H2BK;HIST1H2BC;H2BFS Histone H2B type 1-H;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-C/E/F/G/I;Histone H2B type F-S;Histone H2B no no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 25.207 26.801 2 0.0080833 5119 Miao_Sh-H9_proteinG_mass3_141226_02 107.32 25.936 2430.8 0 0 0 0 0 777.27 46.296 102.28 0 0 841.03 663.92 1270 37 1249 11665;11666;11667;11668;11669 12709;12710;12711 12710 3 IAGQVAAANK Unmodified 941.52943 0.52942943 442 P39019 RPS19 40S ribosomal protein S19 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1 1 1 27.828 28.999 2 1.231E-13 5225 Miao_Sh-c_proteinG_mass3_141226_03 152.11 54.639 24512 1591.1 1655.7 1467.1 1079.5 1449.6 3491.9 1333.8 1616.8 0 4317.2 3420.1 3089 1271 442 1250 11670;11671;11672;11673;11674;11675;11676;11677;11678;11679;11680 12712;12713;12714;12715;12716;12717;12718;12719;12720;12721;12722;12723;12724;12725 12718 14 IAILGFAFK Unmodified 978.59024 0.59023878 288 O60701;O60701-3;O60701-2 UGDH UDP-glucose 6-dehydrogenase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 95.745 95.46 2 0.035026 21309 Miao_Sh-H9_Flag_mass3_141226_01 63.419 23.352 2181.5 0 548.2 0 0 0 0 983.84 0 649.47 0 0 0 1272 288 1251 11681;11682;11683 12726 12726 1 IAIPGLAGAGNSVLLVSNLNPER Unmodified 2274.2696 0.26957993 415 P26599;P26599-2;P26599-3;K7EK45 PTBP1 Polypyrimidine tract-binding protein 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 2 112.36 99.707 3 2.1824E-15 34776 Miao_Sh-c_proteinG_mass3_141226_03 78.354 73.477 0 0 0 0 0 0 0 0 0 0 0 0 0 1273 415 1252 11684;11685;11686 12727;12728;12729 12727 3 IAIYELLFK Unmodified 1108.6532 0.65323296 460 P46783;F6U211;S4R435 RPS10;RPS10-NUDT3 40S ribosomal protein S10 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 1 1 1 1 1 1 1 105.79 101.23 2 3.9036E-07 22014 Miao_Sh-c_Flag_mass3_141226_02 143.04 106.28 235850 16691 13746 13656 30308 0 25086 15543 18677 19176 49473 25723 7768.2 1274 460 1253 11687;11688;11689;11690;11691;11692;11693;11694;11695;11696;11697;11698 12730;12731;12732;12733;12734;12735;12736;12737;12738;12739;12740;12741;12742;12743;12744;12745;12746;12747;12748;12749;12750;12751;12752;12753;12754;12755;12756;12757;12758;12759 12733 30 IALLNVELELK Unmodified 1253.7595 0.75948895 638 Q99832;Q99832-3;F5GZK5;Q99832-4;Q99832-2;B7Z1C9 CCT7 T-complex protein 1 subunit eta yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 3 1 1 2 2 99.389 94.183 2 0.0010984 20905 Miao_Sh-H9_Flag_mass3_141226_03 103.43 55.83 29237 2242.2 0 2241 0 0 0 0 4370.6 5418.4 12053 2912.1 0 1275 638 1254 11699;11700;11701;11702;11703;11704;11705;11706;11707;11708;11709 12760;12761;12762;12763;12764;12765;12766;12767;12768 12766 9 IALTDNALIAR Unmodified 1169.6768 0.67682195 388 P18124;A8MUD9 RPL7 60S ribosomal protein L7 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 2 2 2 2 2 2 1 63.092 65.104 2 2.7399E-45 11543 Miao_Sh-H9_Flag_mass3_141226_01 181.4 93.031 116850 5055.4 0 3770 10409 7188.7 16571 8833.5 0 7819.9 25426 19183 12588 1276 388 1255 11710;11711;11712;11713;11714;11715;11716;11717;11718;11719;11720;11721;11722;11723;11724;11725;11726;11727;11728;11729;11730 12769;12770;12771;12772;12773;12774;12775;12776;12777;12778;12779;12780;12781;12782;12783;12784;12785;12786;12787;12788;12789 12781 21 IANPVEGSSGR Unmodified 1085.5465 0.54653606 580 Q15365 PCBP1 Poly(rC)-binding protein 1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 2 35.001 36.823 2 0.032819 7205 Miao_Sh-H9_proteinG_mass3_141226_03 51.567 31.57 0 0 0 0 0 0 0 0 0 0 0 0 0 1277 580 1256 11731;11732;11733 12790;12791;12792 12792 3 IANPVEGSTDR Unmodified 1157.5677 0.56766543 581 Q15366;Q15366-6;Q15366-3;Q15366-2;Q15366-4;Q15366-5;H3BRU6;F8VZX2;B4DXP5;Q15366-7;H3BSS4;F8VRH0 PCBP2 Poly(rC)-binding protein 2 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 2 1 39.24 39.557 2 0.0028222 8029 Miao_Sh-H9_proteinG_mass3_141226_03 84.479 52.159 652.13 0 0 225.35 0 0 0 0 173.3 0 253.47 0 0 1278 581 1257 11734;11735;11736;11737;11738 12793;12794;12795 12795 3 IAPPETPDSK Unmodified 1053.5342 0.53424004 659 Q9NZI8;Q9NZI8-2 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 1 2 1 33.576 37.736 2 0.0049239 8070 Miao_Sh-H9_proteinG_mass3_141226_01 91.658 60.972 2743 0 0 0 0 0 1399.3 0 0 0 0 0 1343.7 1279 659 1258 11739;11740;11741;11742 12796;12797;12798;12799 12798 4 IAPRPASGPIRPIVR Unmodified 1598.9733 0.97327875 414 P26373;P26373-2;J3QSB4 RPL13 60S ribosomal protein L13 yes no 0 0 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 2 2 1 1 1 1 1 1 1 3 1 49.699 48.67 3;4 9.7473E-05 4619 Miao_Sh-c_Flag_mass3_141226_01 82.202 67.974 106610 8220.9 5653.2 6319.8 9767.4 9599.8 6609.1 8751.3 10230 9533.7 19285 12637 0 1280 414 1259 11743;11744;11745;11746;11747;11748;11749;11750;11751;11752;11753;11754;11755;11756;11757 12800;12801;12802;12803;12804;12805;12806;12807;12808;12809;12810;12811;12812;12813;12814;12815;12816;12817 12800 18 IAQLEEELEEEQGNTELINDR Unmodified 2471.1664 0.16635622 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 10 2 2 3 2 2 3 9 4 85.924 80.104 2;3;4 1.8082E-156 16557 Miao_Sh-c_proteinG_mass3_141226_02 233.87 187.72 318160 24153 0 0 6847.2 42995 25882 30185 27559 5012.1 45449 58919 51156 1281 433 1260 11758;11759;11760;11761;11762;11763;11764;11765;11766;11767;11768;11769;11770;11771;11772;11773;11774;11775;11776;11777;11778;11779;11780;11781;11782;11783;11784;11785;11786;11787;11788;11789;11790;11791;11792;11793;11794;11795;11796 12818;12819;12820;12821;12822;12823;12824;12825;12826;12827;12828;12829;12830;12831;12832;12833;12834;12835;12836;12837;12838;12839;12840;12841;12842;12843;12844;12845;12846;12847;12848;12849;12850;12851;12852;12853;12854;12855;12856;12857;12858;12859;12860;12861;12862;12863;12864 12830 44 IAQLEEQLDNETK Unmodified 1529.7573 0.7573167 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 4 3 2 2 2 5 5 9 5 2 2 56.018 57.295 2;3 2.9797E-269 14792 Miao_Sh-H9_proteinG_mass3_141226_02 288.77 212.44 480560 7663.2 6124.4 2138.6 16960 13749 89010 8574.6 2449.7 9686.3 125980 110300 87921 1282 433 1261 11797;11798;11799;11800;11801;11802;11803;11804;11805;11806;11807;11808;11809;11810;11811;11812;11813;11814;11815;11816;11817;11818;11819;11820;11821;11822;11823;11824;11825;11826;11827;11828;11829;11830;11831;11832;11833;11834;11835;11836;11837;11838;11839 12865;12866;12867;12868;12869;12870;12871;12872;12873;12874;12875;12876;12877;12878;12879;12880;12881;12882;12883;12884;12885;12886;12887;12888;12889;12890;12891;12892;12893;12894;12895;12896;12897;12898;12899;12900;12901;12902;12903;12904;12905;12906;12907;12908;12909;12910;12911;12912;12913;12914;12915;12916;12917;12918;12919;12920;12921;12922;12923;12924;12925;12926;12927;12928;12929 12920 65 IASLEVENQSLR Unmodified 1357.7201 0.72014333 422 P29692;P29692-2;E9PRY8;P29692-3;E9PK01;E9PMW7;E9PPR1;E9PL12;E9PQ49;E9PI39;E9PN91;E9PIZ1;E9PL71;H0YCK7 EEF1D Elongation factor 1-delta yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 3 5 2 1 3 5 3 55.254 56.224 2;3 8.2144E-157 14960 Miao_Sh-H9_proteinG_mass3_141226_01 250.13 148.63 29894 444.6 1238.1 0 1197.3 1494 3149 6744.3 0 0 11553 2055.5 2018.4 1283 422 1262 11840;11841;11842;11843;11844;11845;11846;11847;11848;11849;11850;11851;11852;11853;11854;11855;11856;11857;11858;11859;11860;11861;11862;11863;11864;11865;11866;11867 12930;12931;12932;12933;12934;12935;12936;12937;12938;12939;12940;12941;12942;12943;12944 12939 15 IASPEGQDYLK Unmodified 1219.6085 0.60846762 680 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 49.889 50.741 2 0.0060637 12606 Miao_Sh-H9_proteinG_mass3_141226_01 72.34 34.345 0 0 0 0 0 0 0 0 0 0 0 0 0 1284 680 1263 11868 12945 12945 1 IAVEPVNPSELPK Unmodified 1391.766 0.76603089 244 Q15029;Q15029-2;K7EJ81 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 65.587 64.584 2 0.021956 11478 Miao_Sh-H9_Flag_mass3_141226_02 48.532 34.723 0 0 0 0 0 0 0 0 0 0 0 0 0 1285 244 1264 11869 12946 12946 1 IAYPSLR Unmodified 818.46504 0.46503826 451 P43358 MAGEA4 Melanoma-associated antigen 4 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 2 1 1 1 1 2 1 1 54.056 55.405 2 0.0058143 12049 Miao_Sh-c_proteinG_mass3_141226_03 114.72 49.049 16171 746.54 0 779.74 227.5 0 3561.2 1268.8 1453.9 1644.7 0 3898.7 2590.4 1286 451 1265 11870;11871;11872;11873;11874;11875;11876;11877;11878;11879;11880 12947;12948;12949;12950 12947 3 ICEVRPCGQPVYSSLK Unmodified 1891.9284 0.92843832 268 O00622 CYR61 Protein CYR61 yes yes 0 0 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching 2 3 3 1 1 1 3 1 50.558 52.23 3 8.7513E-06 12196 Miao_Sh-c_proteinG_mass3_141226_03 82.59 42.312 53909 3584 0 0 6111.3 3243.9 6989.4 0 1053.7 2202.2 20719 0 10006 1287 268 1266 11881;11882;11883;11884;11885;11886;11887;11888;11889;11890;11891;11892;11893;11894;11895 12951;12952;12953;12954;12955 12954 5 IDEPLEGSEDR Unmodified 1258.5677 0.56772501 494 P61978;P61978-2;Q5T6W5;P61978-3;S4R359 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 1 1 2 1 1 42.373 43.586 2 1.7353E-15 8854 Miao_Sh-c_proteinG_mass3_141226_03 158.3 93.588 22557 466.38 138.1 0 296.65 0 5995.1 583.88 703.8 714.89 4406 4660.4 4591.7 1288 494 1267 11896;11897;11898;11899;11900;11901;11902;11903;11904;11905;11906;11907 12956;12957;12958;12959;12960;12961;12962;12963;12964;12965;12966;12967;12968;12969;12970;12971 12961 16 IDFSEFLSLLGDIATDYHK Unmodified 2183.0787 0.078650837 425 P31151 S100A7 Protein S100-A7 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 119.99 121.15 3 7.9746E-17 33263 Miao_Sh-c_proteinG_mass3_141226_02 129.46 110.6 28796 0 0 305.57 16432 10881 0 396.91 780.54 0 0 0 0 1289 425 1268 11908;11909;11910;11911;11912 12972;12973 12973 2 IDFVGELNDK Unmodified 1148.5714 0.57135383 149 P55786;E9PLK3;B7Z463;A6NEC2;E9PP11;E5RJ24;E7EWZ2;I3L083;E9PJY4;E9PPD4;H0YAQ6;A6NEC2-3 NPEPPS;NPEPPSL1 Puromycin-sensitive aminopeptidase;Puromycin-sensitive aminopeptidase-like protein yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 66.642 66.993 2 0.030977 19055 Miao_Sh-H9_proteinG_mass3_141226_01 58.172 29.998 0 0 0 0 0 0 0 0 0 0 0 0 0 1290 149 1269 11913 12974 12974 1 IDIIPNPQER Unmodified 1193.6404 0.64043645 344 P08238;Q58FF7 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching 1 1 2 2 1 1 1 57.677 60.233 2 0.0015288 9529 Miao_Sh-H9_Flag_mass3_141226_01 115.57 77.271 30101 0 529.8 0 0 2981.9 11433 4838.6 0 8980.3 1337.5 0 0 1291 344 1270 11914;11915;11916;11917;11918;11919;11920;11921;11922 12975;12976;12977;12978;12979;12980;12981;12982;12983 12980 9 IDILDSALLRPGR Unmodified 1437.8304 0.83036248 498 P62195;P62195-2 PSMC5 26S protease regulatory subunit 8 yes no 0 0 0 0 1 By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 79.047 79.222 3 0.0039211 14607 Miao_Sh-c_Flag_mass3_141226_01 67.997 10.212 22570 4264.2 0 5180.7 0 0 0 6192.7 0 6932.7 0 0 0 1292 498 1271 11923;11924;11925;11926 12984;12985 12984 2 IDISNVK Unmodified 787.44397 0.44396847 542 Q02878 RPL6 60S ribosomal protein L6 yes yes 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 1 32.367 33.77 2 0.044806 2943 Miao_Sh-c_proteinG_mass3_141226_02 73.616 13.258 720.16 0 0 0 0 491.47 0 0 144.03 0 84.66 0 0 1293 542 1272 11927;11928;11929 12986 12986 1 IDTIEIITDR Unmodified 1187.6398 0.63976774 397 P22626;P22626-2 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 3 3 1 3 5 5 1 1 3 6 9 74.661 73.288 2;3 4.9552E-120 19357 Miao_Sh-H9_proteinG_mass3_141226_03 238.51 131.83 282370 5177.5 4576.1 992.78 39484 37342 46050 0 0 428.37 62927 47657 37732 1294 397 1273 11930;11931;11932;11933;11934;11935;11936;11937;11938;11939;11940;11941;11942;11943;11944;11945;11946;11947;11948;11949;11950;11951;11952;11953;11954;11955;11956;11957;11958;11959;11960;11961;11962;11963;11964;11965;11966;11967;11968;11969 12987;12988;12989;12990;12991;12992;12993;12994;12995;12996;12997;12998;12999;13000;13001;13002;13003;13004;13005;13006;13007;13008;13009;13010;13011;13012;13013;13014;13015;13016;13017;13018;13019;13020;13021;13022;13023;13024;13025;13026;13027 13021 41 IDVDAPDIDIHGPDAK Unmodified 1689.821 0.82097959 550 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 69.21 63.797 3 0.025462 16804 Miao_Sh-H9_proteinG_mass3_141226_03 37.77 27.125 1387.4 0 0 0 0 0 323.39 0 0 0 0 0 1064.1 1295 550 1274 11970;11971 13028 13028 1 IEAINQAIANEYEVR Unmodified 1731.8792 0.87916317 612 Q8NCA5;Q8NCA5-2;E9PH82;B4DT23 FAM98A Protein FAM98A yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 4 1 70.741 71.845 2;3 1.3056E-12 20115 Miao_Sh-H9_proteinG_mass3_141226_03 139.34 100.57 6879.1 0 0 0 1461.8 0 0 0 0 0 2949.7 0 2467.6 1296 612 1275 11972;11973;11974;11975;11976;11977;11978;11979 13029;13030;13031;13032;13033;13034;13035 13035 7 IEDFLER Unmodified 920.46035 0.46034682 459 P46781;B5MCT8;C9JM19 RPS9 40S ribosomal protein S9 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1 1 1 57.676 59.271 2 5.1261E-05 9315 Miao_Sh-H9_Flag_mass3_141226_01 149.4 97.613 66333 0 1213.4 1227.9 3095.2 2727.9 11350 3551.8 3756 3472.9 15139 9737.1 11062 1297 459 1276 11980;11981;11982;11983;11984;11985;11986;11987;11988;11989;11990 13036;13037;13038;13039;13040;13041;13042;13043;13044;13045;13046;13047 13040 12 IEDLSQEAQLAAAEK Unmodified 1614.8101 0.81008055 644 Q9BZK3 NACAP1 Putative nascent polypeptide-associated complex subunit alpha-like protein yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 54.91 56.163 3 0.0027212 14749 Miao_Sh-H9_proteinG_mass3_141226_02 57.148 29.475 4019.9 818.4 0 0 0 0 0 0 0 0 0 3201.5 0 1298 644 1277 11991;11992 13048 13048 1 IEDLSQQAQLAAAEK Unmodified 1613.8261 0.82606496 138 E9PAV3;F8W1N5;F8VZJ2;F8VNW4;F8W0W4;H0YHX9;Q13765;E9PAV3-2 NACA Nascent polypeptide-associated complex subunit alpha, muscle-specific form;Nascent polypeptide-associated complex subunit alpha yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 1 2 1 2 3 1 2 4 55.354 56.85 2;3 0.00013837 13713 Miao_Sh-c_proteinG_mass3_141226_03 85.362 56.55 18040 1290.5 0 0 973.76 821.17 1972.5 4616.8 0 638.07 4362.2 0 3365.2 1299 138 1278 11993;11994;11995;11996;11997;11998;11999;12000;12001;12002;12003;12004;12005;12006;12007;12008 13049;13050;13051;13052;13053;13054 13049 6 IEDNNTLVFIVDVK Unmodified 1617.8614 0.86138784 9 P62750;H7BY10;K7EJV9;K7ERT8;A8MUS3;K7EMA7 RPL23A 60S ribosomal protein L23a yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 102.35 96.274 2;3 0.00087573 33662 Miao_Sh-H9_proteinG_mass3_141226_01 73.279 45.075 5681.8 0 0 0 0 617.57 2595.1 0 0 0 0 2469.1 0 1300 9 1279 12009;12010;12011;12012;12013;12014;12015 13055;13056;13057;13058;13059 13057 5 IEDVTPIPSDSTR Unmodified 1428.7096 0.70963822 501 P62263 RPS14 40S ribosomal protein S14 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 4 1 1 2 2 2 1 2 4 2 48.781 50.555 2;3 9.926E-25 12305 Miao_Sh-H9_proteinG_mass3_141226_02 164.22 123.87 80283 1011.1 1890 515.94 0 2277 16738 1044.5 4690.4 4038 17817 14635 15626 1301 501 1280 12016;12017;12018;12019;12020;12021;12022;12023;12024;12025;12026;12027;12028;12029;12030;12031;12032;12033;12034;12035;12036;12037;12038;12039 13060;13061;13062;13063;13064;13065;13066;13067;13068;13069;13070;13071;13072;13073;13074;13075;13076;13077;13078;13079;13080;13081;13082 13077 23 IEDVTPIPSDSTRR Unmodified 1584.8107 0.81074925 501 P62263 RPS14 40S ribosomal protein S14 yes yes 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 45.518 47.141 3 5.4277E-06 10023 Miao_Sh-c_proteinG_mass3_141226_03 129.37 80.42 16098 362.04 0 0 338.46 0 4010.6 652.68 763.87 0 2947.6 3778 3244.9 1302 501 1281 12040;12041;12042;12043;12044;12045;12046;12047 13083;13084;13085;13086;13087;13088 13084 6 IEEELGSK Unmodified 903.45493 0.45492709 333 P06733;P06733-2 ENO1 Alpha-enolase yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 2 1 1 1 1 33.264 33.965 2 0.00075396 3096 Miao_Sh-c_Flag_mass3_141226_03 111.82 7.6115 2474.7 665.35 0 479.34 0 313.13 0 458.9 558.02 0 0 0 0 1303 333 1282 12048;12049;12050;12051;12052;12053;12054 13089;13090;13091;13092;13093;13094;13095 13092 7 IEEVPELPLVVEDK Unmodified 1607.8658 0.86580451 438 P36578;H3BM89 RPL4 60S ribosomal protein L4 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 1 4 1 1 5 3 1 4 7 2 2 91.562 86.562 2;3 1.8585E-05 30782 Miao_Sh-c_proteinG_mass3_141226_03 108.36 55.966 53699 4659 5462.7 331.52 14591 2552.3 883.52 2247.1 0 522.94 3880.5 11965 6602.7 1304 438 1283 12055;12056;12057;12058;12059;12060;12061;12062;12063;12064;12065;12066;12067;12068;12069;12070;12071;12072;12073;12074;12075;12076;12077;12078;12079;12080;12081;12082;12083;12084;12085;12086;12087;12088;12089 13096;13097;13098;13099;13100;13101;13102;13103;13104;13105;13106;13107;13108;13109;13110;13111;13112;13113;13114;13115;13116;13117;13118;13119;13120;13121;13122;13123;13124;13125;13126;13127;13128;13129;13130;13131;13132;13133;13134 13109 39 IEGEGSVLQAK Unmodified 1129.5979 0.59790293 573 Q14764 MVP Major vault protein yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 2 1 3 2 1 41.213 43.99 2;3 9.7404E-15 9570 Miao_Sh-H9_proteinG_mass3_141226_03 150.33 57.182 182360 0 0 0 2776.6 3028.5 52505 0 0 1880.3 50200 38396 33571 1305 573 1284 12090;12091;12092;12093;12094;12095;12096;12097;12098;12099;12100;12101 13135;13136;13137;13138;13139;13140;13141;13142;13143;13144;13145;13146 13144 12 IEGLLAAFPK Unmodified 1057.6172 0.61718181 15 P48444;B0YIW6;E9PK34 ARCN1 Coatomer subunit delta yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS 1 1 78.718 61.625 2 0.0096022 22944 Miao_Sh-H9_proteinG_mass3_141226_03 77.192 44.299 580.25 0 0 0 0 0 0 0 0 0 0 0 580.25 1306 15 1285 12102;12103 13147;13148 13148 2 IEGVYAR Unmodified 806.42865 0.42865276 87 P18077;F8WBS5;F8WB72;C9K025 RPL35A 60S ribosomal protein L35a yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 1 1 1 35.973 36.891 2 0.0034746 3800 Miao_Sh-c_Flag_mass3_141226_01 124.89 60.111 5506.1 529.06 457.84 439.17 566.7 550.84 0 0 454.56 539.23 1820.2 148.51 0 1307 87 1286 12104;12105;12106;12107;12108;12109;12110;12111;12112 13149;13150;13151;13152;13153;13154;13155;13156 13149 8 IEGYEDQVLITEHGDLGNSR Unmodified 2244.0659 0.065854319 475 P52907 CAPZA1 F-actin-capping protein subunit alpha-1 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 1 61.179 63.184 3 0.038526 11464 Miao_Sh-c_proteinG_mass3_141226_01 30.042 22.179 8365.5 0 0 482.72 1206.8 364.57 0 0 0 5030.3 0 730.83 550.23 1308 475 1287 12113;12114;12115;12116;12117;12118 13157 13157 1 IEHVEQNTEEFLR Unmodified 1642.7951 0.79509919 664 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 1 3 1 3 2 1 1 1 2 53.342 55.745 3 1.5127E-08 7397 Miao_Sh-c_proteinG_mass3_141226_01 135.02 100.12 37009 0 0 353.92 3700.1 2485.9 15504 1458.9 0 557.57 4380.9 4457.7 4109.4 1309 664 1288 12119;12120;12121;12122;12123;12124;12125;12126;12127;12128;12129;12130;12131;12132;12133 13158;13159;13160;13161;13162;13163;13164;13165 13158 7 IEIESFYEGEDFSETLTR Unmodified 2163.9848 0.98481003 355 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 4 2 1 1 2 5 4 1 2 93.39 91.628 2;3 1.5648E-61 20831 Miao_Sh-H9_Flag_mass3_141226_03 182.31 154.03 83644 0 11212 0 6074.7 1872.1 0 28098 3504.7 29744 0 0 3138.2 1310 355 1289 12134;12135;12136;12137;12138;12139;12140;12141;12142;12143;12144;12145;12146;12147;12148;12149;12150;12151;12152;12153;12154;12155;12156;12157;12158 13166;13167;13168;13169;13170;13171;13172;13173;13174;13175;13176;13177;13178;13179;13180;13181;13182;13183;13184;13185;13186;13187;13188;13189;13190;13191;13192 13183 27 IEILAPPNGSVPGDR Unmodified 1533.8151 0.81510635 551 Q12904;Q12904-2 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 65.235 64.784 2 0.033455 11264 Miao_Sh-H9_Flag_mass3_141226_01 43.592 21.537 0 0 0 0 0 0 0 0 0 0 0 0 0 1311 551 1290 12159 13193 13193 1 IEISELNR Unmodified 972.52401 0.52400971 314;108 P04264;CON__P04264;P35908;CON__P35908 KRT1;KRT2 Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 2 epidermal no no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 2 3 1 1 3 2 54.466 55.265 2 1.4946E-92 12290 Miao_Sh-H9_proteinG_mass3_141226_03 234.82 55.826 180810 0 398.97 0 5343.1 6071.6 3815.7 855.07 0 0 0 89781 74545 + 1312 314;108 1291 12160;12161;12162;12163;12164;12165;12166;12167;12168;12169;12170;12171;12172;12173 13194;13195;13196;13197;13198;13199;13200;13201;13202;13203;13204 13202 11 IEISSPCCPR Unmodified 1217.5533 0.5532777 595 Q5T749 KPRP Keratinocyte proline-rich protein yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 45.72 46.672 2 0.011444 11335 Miao_Sh-H9_proteinG_mass3_141226_01 72.434 38.047 0 0 0 0 0 0 0 0 0 0 0 0 0 1313 595 1292 12174 13205 13205 1 IETLDPALIRPGR Unmodified 1449.8304 0.83036248 39 P62191;B4DR63 PSMC1 26S protease regulatory subunit 4 yes no 0 0 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 1 1 1 1 1 1 63.843 63.303 3 1.8819E-05 9518 Miao_Sh-c_Flag_mass3_141226_03 116.24 86.494 35477 4495.7 3907.8 4096 993.66 0 0 6463.4 6752.3 7734.6 0 198.13 835.96 1314 39 1293 12175;12176;12177;12178;12179;12180;12181;12182;12183;12184 13206;13207;13208;13209;13210;13211;13212;13213;13214;13215 13210 10 IEVIEIMTDR Unmodified 1217.6326 0.63257388 180 P09651;F8W6I7;P09651-3;P09651-2;F8VZ49;Q32P51;F8VTQ5;F8VYN5;H0YH80 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 2 1 1 1 2 2 2 2 3 79.252 74.079 2 2.0776E-18 15683 Miao_Sh-c_proteinG_mass3_141226_01 160.53 66.222 25263 1737.2 0 1033.3 6541.3 861.52 4895 0 2892.3 0 3839.8 2324.4 1138.4 1315 180 1294 12185;12186;12187;12188;12189;12190;12191;12192;12193;12194;12195;12196;12197;12198;12199;12200 13216;13217;13218;13219;13220;13221;13222 13216 7 IEVIEIMTDR Oxidation (M) 1233.6275 0.6274885 180 P09651;F8W6I7;P09651-3;P09651-2;F8VZ49;Q32P51;F8VTQ5;F8VYN5;H0YH80 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 0 0 1 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 1 57.323 59.278 2 0.012502 14776 Miao_Sh-c_proteinG_mass3_141226_03 69.815 34.52 12962 0 0 0 0 0 3981.1 0 476.07 0 7691 814.04 0 1316 180 1294 12201;12202;12203;12204 13223 13223 21 1 IEVPLYSLLEQTHLK Unmodified 1781.9927 0.99273636 625 Q92598;Q92598-2;Q92598-3;Q92598-4;B4DY72 HSPH1 Heat shock protein 105 kDa yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 98.602 98.401 3 0.0096293 23243 Miao_Sh-H9_Flag_mass3_141226_02 49.595 31.579 0 0 0 0 0 0 0 0 0 0 0 0 0 1317 625 1295 12205 13224 13224 1 IEVVNFLVPNAVYDIVK Unmodified 1931.0768 0.076800343 121 O94905;E5RHW4;E5RJ09;O94905-2;O94905-3 ERLIN2 Erlin-2 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 2 1 110.09 110.37 3 0.0070332 26617 Miao_Sh-H9_Flag_mass3_141226_01 46.121 36.839 11057 1132.6 2374.6 277.01 0 0 0 0 4033.5 3239.4 0 0 0 1318 121 1296 12206;12207;12208;12209;12210;12211;12212 13225;13226;13227;13228 13226 4 IEWLESHQDADIEDFK Unmodified 1973.9007 0.90068647 355 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 3 7 5 1 2 2 3 2 3 1 3 83.789 80.217 2;3 2.0112E-43 13743 Miao_Sh-c_Flag_mass3_141226_02 172.93 120.43 336310 42557 0 30826 15441 13847 3328.7 44723 111930 69084 934.13 3636.5 0 1319 355 1297 12213;12214;12215;12216;12217;12218;12219;12220;12221;12222;12223;12224;12225;12226;12227;12228;12229;12230;12231;12232;12233;12234;12235;12236;12237;12238;12239;12240;12241;12242;12243;12244 13229;13230;13231;13232;13233;13234;13235;13236;13237;13238;13239;13240;13241;13242;13243;13244;13245;13246;13247;13248;13249;13250;13251;13252;13253;13254;13255;13256;13257;13258;13259;13260;13261;13262;13263;13264;13265;13266 13237 37 IFAPNHVVAK Unmodified 1094.6237 0.62366417 258 Q02543;M0R3D6;M0R1A7;M0R117 RPL18A 60S ribosomal protein L18a yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 2 1 1 2 4 2 2 42.05 42.767 2;3 0.0022157 8164 Miao_Sh-c_proteinG_mass3_141226_03 82.645 47.289 37547 367.19 610.95 431.79 604.39 0 10306 0 163.65 1489 9018.7 9047.7 5507 1320 258 1298 12245;12246;12247;12248;12249;12250;12251;12252;12253;12254;12255;12256;12257;12258;12259;12260;12261;12262;12263;12264 13267;13268;13269;13270;13271;13272;13273;13274;13275;13276;13277;13278;13279;13280;13281;13282;13283 13270 17 IFDIDEAEEGVK Unmodified 1363.6507 0.65072636 390 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 2 2 2 1 1 3 3 67.749 67.529 2 0.00057999 12767 Miao_Sh-H9_Flag_mass3_141226_03 100.38 63.698 17809 0 1213.8 0 257.4 0 725.92 0 4068.7 3004.3 250.9 4917.9 3369.6 1321 390 1299 12265;12266;12267;12268;12269;12270;12271;12272;12273;12274;12275;12276;12277;12278;12279;12280;12281 13284;13285;13286;13287;13288;13289;13290;13291 13290 8 IFEAYWFLGQAGSSIPSTWPR Unmodified 2412.1903 0.19026697 608 Q8IV08 PLD3 Phospholipase D3 yes yes 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 110.31 110.23 3 0.00047415 27870 Miao_Sh-H9_Flag_mass3_141226_03 54.668 46.754 0 0 0 0 0 0 0 0 0 0 0 0 0 1322 608 1300 12282;12283 13292;13293 13293 2 IFEPPPPK Unmodified 923.51165 0.5116541 279 O43143 DHX15 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 2 41.141 43.831 2 0.024135 10265 Miao_Sh-H9_proteinG_mass3_141226_01 71.501 18.818 0 0 0 0 0 0 0 0 0 0 0 0 0 1323 279 1301 12284;12285;12286 13294;13295;13296 13295 3 IFGVTTLDIVR Unmodified 1232.7129 0.71287311 195 P40926;G3XAL0 MDH2 Malate dehydrogenase, mitochondrial;Malate dehydrogenase yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 84.859 86.313 2 0.0050998 19004 Miao_Sh-c_proteinG_mass3_141226_01 73.9 25.865 0 0 0 0 0 0 0 0 0 0 0 0 0 1324 195 1302 12287 13297 13297 1 IFHELTQTDK Unmodified 1230.6245 0.62445203 358 P11586;F5H2F4 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 40.515 41.117 3 0.055932 9320 Miao_Sh-H9_proteinG_mass3_141226_01 36.32 10.761 2190.5 133.25 0 0 0 0 0 0 131.03 0 1256.5 0 669.67 1325 358 1303 12288;12289;12290;12291 13298 13298 1 IFIGTFK Unmodified 824.47963 0.47962569 23 P14678;P63162;P14678-2;B3KVR1;J3QLE5;P14678-3;J3KRY3;S4R3P3 SNRPB;SNRPN Small nuclear ribonucleoprotein-associated proteins B and B';Small nuclear ribonucleoprotein-associated protein N yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 1 3 1 1 2 2 2 3 66.051 65.362 2 0.0076973 28316 Miao_Sh-c_proteinG_mass3_141226_03 107.43 37.997 36530 3402.3 0 2326.8 5037.7 3902.4 1948.4 2045.8 3312.7 4675 5751.5 0 4126.8 1326 23 1304 12292;12293;12294;12295;12296;12297;12298;12299;12300;12301;12302;12303;12304;12305;12306;12307;12308;12309;12310;12311;12312 13299;13300;13301;13302;13303;13304;13305;13306;13307;13308;13309;13310;13311;13312;13313;13314;13315;13316 13308 18 IFTSIGEDYDER Unmodified 1443.6518 0.65178899 85 P35232;C9JW96;C9JZ20;E7ESE2;E9PCW0;D6RBK0;P35232-2 PHB Prohibitin yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 2 61.925 62.042 2 0.0039708 8984 Miao_Sh-c_Flag_mass3_141226_02 69.352 36.264 0 0 0 0 0 0 0 0 0 0 0 0 0 1327 85 1305 12313;12314;12315 13317;13318;13319 13317 3 IFVGGLNPEATEEK Unmodified 1502.7617 0.76167379 115 Q99729-3;D6R9P3;D6RD18;D6RBZ0;Q99729-2 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 2 3 5 1 1 2 3 4 1 60.994 62.648 2;3 5.5627E-72 15551 Miao_Sh-c_proteinG_mass3_141226_03 203.76 153.65 283610 1864.2 3466.8 0 41241 41156 29780 2417.4 6851.3 0 61080 48914 46842 1328 115 1306 12316;12317;12318;12319;12320;12321;12322;12323;12324;12325;12326;12327;12328;12329;12330;12331;12332;12333;12334;12335;12336;12337;12338;12339 13320;13321;13322;13323;13324;13325;13326;13327;13328;13329;13330;13331;13332;13333;13334;13335;13336;13337;13338;13339;13340;13341;13342;13343;13344;13345;13346;13347;13348;13349;13350;13351;13352;13353;13354;13355;13356;13357;13358;13359;13360;13361;13362;13363;13364;13365;13366;13367;13368;13369;13370;13371;13372;13373;13374;13375;13376;13377;13378;13379 13343 60 IFVGGLSPDTPEEK Unmodified 1487.7508 0.75077476 41 Q14103;Q14103-3;D6RF44;H0YA96;D6RAF8;H0Y8G5;B4DTC3;Q14103-4;Q14103-2;F5H6R6 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 2 1 1 2 1 3 2 4 3 62.452 62.479 2;3 8.2018E-88 15173 Miao_Sh-c_proteinG_mass3_141226_03 210.38 93.831 67372 3617.9 3070.7 2616.7 5116.3 3721.5 7023 8407.2 12809 7156.9 0 13565 267.72 1329 41 1307 12340;12341;12342;12343;12344;12345;12346;12347;12348;12349;12350;12351;12352;12353;12354;12355;12356;12357;12358;12359;12360 13380;13381;13382;13383;13384;13385;13386;13387;13388;13389;13390;13391;13392;13393;13394;13395;13396;13397 13387 18 IGAEVYHNLK Unmodified 1142.6084 0.60840804 333 P06733;P06733-2;K7EM90 ENO1 Alpha-enolase;Enolase yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 3 1 1 3 2 4 50.513 50.081 2;3 7.0118E-12 8790 Miao_Sh-c_proteinG_mass3_141226_03 144.28 94.835 67780 1420.6 0 1368.7 0 846.38 10440 0 2841.6 0 17398 21593 11871 1330 333 1308 12361;12362;12363;12364;12365;12366;12367;12368;12369;12370;12371;12372;12373;12374;12375;12376;12377;12378 13398;13399;13400;13401;13402;13403;13404;13405;13406;13407;13408;13409;13410;13411;13412;13413;13414;13415;13416;13417;13418;13419;13420;13421;13422;13423;13424;13425;13426 13406 29 IGAVEEELNR Unmodified 1128.5775 0.57750184 473 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 47.938 49.015 2 2.8482E-06 5260 Miao_Sh-c_Flag_mass3_141226_03 135.86 97.555 5149.7 0 0 777.83 0 607.52 0 0 1881.6 1882.8 0 0 0 1331 473 1309 12379;12380;12381;12382 13427;13428;13429 13427 3 IGAVNCGDDR Unmodified 1075.4717 0.47165656 609 Q8IXB1;Q8IXB1-2;Q8IXB1-3;E7EP04 DNAJC10 DnaJ homolog subfamily C member 10 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 29.715 31.808 2 0.012174 2733 Miao_Sh-c_proteinG_mass3_141226_02 73.499 49.469 1914.6 0 0 0 196.74 250.58 0 0 0 0 0 815.94 651.37 1332 609 1310 12383;12384;12385;12386 13430;13431 13430 2 IGEGTYGVVYK Unmodified 1184.6077 0.60773933 330 P06493;E5RIU6;P06493-2;P24941;Q00526;K7ELV5;E7ESI2;G3V5T9;P24941-2;G3V317 CDK1;CDK2;CDK3 Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 51.358 53.865 2 0.0028334 13349 Miao_Sh-H9_proteinG_mass3_141226_02 84.309 39.49 0 0 0 0 0 0 0 0 0 0 0 0 0 1333 330 1311 12387 13432 13432 1 IGELFSK Unmodified 792.43815 0.43815481 533 P78527;E7EUY0;P78527-2;F5GX40 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 50.321 53.395 2 0.050438 13099 Miao_Sh-H9_proteinG_mass3_141226_01 71.342 30.115 3464.7 0 0 0 0 0 347.43 0 0 0 2535.4 581.9 0 1334 533 1312 12388;12389;12390 13433 13433 1 IGFPWSEIR Unmodified 1103.5764 0.57637963 412 P26038 MSN Moesin no no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 2 1 1 1 1 2 2 1 86.565 86.271 2 0.0026966 18425 Miao_Sh-H9_Flag_mass3_141226_01 91.867 54.318 16209 1473.5 0 1516.9 4936.6 2052.3 0 2469.6 3290.6 0 0 469.43 0 1335 412 1313 12391;12392;12393;12394;12395;12396;12397;12398;12399;12400;12401;12402 13434;13435;13436;13437;13438;13439;13440;13441;13442;13443;13444 13440 11 IGFVGFPSVGK Unmodified 1106.6124 0.61243078 674 Q9Y295 DRG1 Developmentally-regulated GTP-binding protein 1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 77.776 65.596 2 0.0052446 23177 Miao_Sh-H9_proteinG_mass3_141226_01 73.666 44.708 0 0 0 0 0 0 0 0 0 0 0 0 0 1336 674 1314 12403 13445 13445 1 IGGIGTVPVGR Unmodified 1024.6029 0.60292873 527 P68104;Q5VTE0;Q05639 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 2 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 2 2 1 1 1 2 1 1 1 1 52.355 53.415 2 2.2352E-39 13598 Miao_Sh-H9_proteinG_mass3_141226_01 183.78 124.86 196190 8380.1 7238.3 7607.2 4414.4 0 33306 14049 13173 13609 38286 29955 26173 1337 527 1315 12404;12405;12406;12407;12408;12409;12410;12411;12412;12413;12414;12415;12416;12417 13446;13447;13448;13449;13450;13451;13452;13453;13454;13455;13456;13457;13458;13459;13460;13461;13462;13463;13464;13465;13466;13467 13463 22 IGIFGQDEDVTSK Unmodified 1407.6882 0.6881745 380 P16615;P16615-5;P16615-2;P16615-3;H7C5W9;P16615-4 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 61.644 64.051 2 0.0076598 17398 Miao_Sh-H9_proteinG_mass3_141226_02 60.196 41.29 0 0 0 0 0 0 0 0 0 0 0 0 0 1338 380 1316 12418 13468 13468 1 IGLFGGAGVGK Unmodified 974.55492 0.5549159 331 P06576;H0YH81;F8VPV9;F8W079 ATP5B ATP synthase subunit beta, mitochondrial;ATP synthase subunit beta yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 1 1 2 1 1 66.369 63.895 2 0.035322 16594 Miao_Sh-H9_proteinG_mass3_141226_03 50.194 17.874 5265.5 906.29 1323.6 0 0 0 1922.3 1113.3 0 0 0 0 0 1339 331 1317 12419;12420;12421;12422;12423;12424 13469;13470;13471 13471 3 IGPLGLSPK Unmodified 880.5382 0.53820321 424 P30050 RPL12 60S ribosomal protein L12 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 2 2 1 1 1 1 53.859 55.943 2 3.5245E-06 13715 Miao_Sh-H9_proteinG_mass3_141226_03 137.14 73.716 76223 1986.9 2134 2876.1 3638.5 3299.2 12303 6119.2 0 7296.6 14272 11975 10323 1340 424 1318 12425;12426;12427;12428;12429;12430;12431;12432;12433;12434;12435;12436;12437;12438;12439 13472;13473;13474;13475;13476;13477;13478;13479;13480;13481;13482;13483;13484;13485;13486;13487;13488;13489;13490;13491;13492;13493;13494 13492 23 IGQGYLIK Unmodified 890.52255 0.52255314 443 P39023;G5E9G0;B5MCW2 RPL3 60S ribosomal protein L3 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 49.015 51.621 2 0.0040216 12940 Miao_Sh-H9_proteinG_mass3_141226_01 109.36 44.044 30428 0 1191 0 0 0 9675.8 0 0 0 11207 0 8354.2 1341 443 1319 12440;12441;12442;12443 13495;13496;13497;13498;13499;13500 13497 6 IGQLEEQLEQEAK Unmodified 1513.7624 0.76240208 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 2 3 4 2 3 3 3 1 4 63.909 64.488 2;3 8.2865E-125 18069 Miao_Sh-H9_proteinG_mass3_141226_01 233.19 197.28 110880 3982.9 1902.5 3234.3 4198.6 10842 22019 1148.5 3474.8 8257.8 30692 0 21127 1342 434 1320 12444;12445;12446;12447;12448;12449;12450;12451;12452;12453;12454;12455;12456;12457;12458;12459;12460;12461;12462;12463;12464;12465;12466;12467;12468;12469;12470;12471;12472;12473;12474;12475;12476;12477 13501;13502;13503;13504;13505;13506;13507;13508;13509;13510;13511;13512;13513;13514;13515;13516;13517;13518;13519;13520;13521;13522;13523;13524;13525;13526;13527 13521 27 IGQPTVSYFLK Unmodified 1251.6863 0.68632401 679 Q9Y3B7;Q9Y3B7-2;Q9Y3B7-3 MRPL11 39S ribosomal protein L11, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 72.122 73.876 2 0.0054777 19692 Miao_Sh-c_proteinG_mass3_141226_03 81.525 43.969 3161.6 0 705.02 0 0 0 1957.5 499.08 0 0 0 0 0 1343 679 1321 12478;12479;12480;12481 13528;13529 13528 2 IGVITNR Unmodified 771.46029 0.46028724 511 P62701 RPS4X 40S ribosomal protein S4, X isoform yes yes 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 36.526 38.293 2 0.0036695 7465 Miao_Sh-H9_proteinG_mass3_141226_03 120.52 46.083 13189 0 599.2 0 0 400.58 2649.9 0 57.532 912.72 3438 2682.4 2449.1 1344 511 1322 12482;12483;12484;12485;12486;12487;12488;12489 13530;13531;13532;13533;13534;13535;13536;13537;13538 13538 9 IGVLDEGK Unmodified 829.45453 0.45453316 459 P46781;B5MCT8;C9JM19 RPS9 40S ribosomal protein S9 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 40.47 42.912 2 0.0024571 8642 Miao_Sh-c_proteinG_mass3_141226_03 115.49 41.239 32944 0 0 0 949.39 1146.4 8041.1 0 67.518 0 8424.4 7699.4 6615.7 1345 459 1323 12490;12491;12492;12493;12494;12495;12496 13539;13540;13541;13542;13543;13544;13545;13546;13547 13541 9 IHAEFVQQK Unmodified 1098.5822 0.58219329 167 P19474;F5H012 TRIM21 E3 ubiquitin-protein ligase TRIM21 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 2 2 1 1 2 2 1 35.946 36.525 2;3 0.00014869 3562 Miao_Sh-H9_Flag_mass3_141226_02 126.07 77.506 4997.3 298.94 521.5 739.54 0 0 693.58 342.74 961 1020.6 0 419.36 0 1346 167 1324 12497;12498;12499;12500;12501;12502;12503;12504;12505;12506;12507;12508;12509 13548;13549;13550;13551;13552;13553;13554;13555;13556;13557;13558;13559 13557 12 IHAYSQLLESYR Unmodified 1478.7518 0.75177781 69 Q15008;C9IZE4;E9PHI9;Q15008-2 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 1 1 1 1 63.245 63.375 3 0.0034498 10858 Miao_Sh-H9_Flag_mass3_141226_01 63.473 37.427 6845.1 450.06 0 197.41 297.47 0 1968.7 665.25 839.09 1034.8 542.21 216.34 633.72 1347 69 1325 12510;12511;12512;12513;12514;12515;12516;12517;12518;12519 13560;13561;13562 13561 3 IHFPLATYAPVISAEK Unmodified 1755.956 0.95595693 529 P68363 TUBA1B Tubulin alpha-1B chain no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6 3 2 4 3 2 7 5 2 3 1 86.191 84.349 2;3 2.0002E-14 35514 Miao_Sh-H9_proteinG_mass3_141226_01 140.27 127.48 272030 9940.4 18897 19899 11413 41299 0 24901 34794 38506 15508 35319 21556 1348 529 1326 12520;12521;12522;12523;12524;12525;12526;12527;12528;12529;12530;12531;12532;12533;12534;12535;12536;12537;12538;12539;12540;12541;12542;12543;12544;12545;12546;12547;12548;12549;12550;12551;12552;12553;12554;12555;12556;12557 13563;13564;13565;13566;13567;13568;13569;13570;13571;13572;13573;13574;13575;13576;13577;13578;13579;13580;13581;13582;13583;13584;13585;13586;13587;13588;13589;13590;13591;13592;13593;13594;13595;13596;13597;13598;13599;13600;13601;13602;13603;13604;13605;13606;13607;13608;13609;13610;13611;13612;13613;13614;13615;13616;13617;13618;13619;13620;13621;13622;13623;13624;13625;13626;13627;13628;13629;13630;13631;13632;13633;13634;13635;13636;13637;13638;13639;13640;13641;13642;13643;13644 13637 82 IHHELNQFCSAHTLQEVYIELFDQIDENLK Unmodified 3682.7726 0.77259619 292 O75477;B0QZ43 ERLIN1 Erlin-1 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 111.78 111.91 4;5 0.00040993 25977 Miao_Sh-c_Flag_mass3_141226_03 35.934 28.571 8902.4 0 0 3553 0 0 0 2075.4 0 3274 0 0 0 1349 292 1327 12558;12559;12560 13645;13646;13647 13645 0 IHIDLPNEQAR Unmodified 1304.6837 0.68369824 508 P62333 PSMC6 26S protease regulatory subunit 10B yes yes 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 2 1 1 2 55.494 55.5 3 0.0032351 6757 Miao_Sh-c_Flag_mass3_141226_03 73.499 50.127 8174.1 302.36 2092 608.35 0 0 0 2575.2 2596.2 0 0 0 0 1350 508 1328 12561;12562;12563;12564;12565;12566;12567 13648;13649 13648 1 IHPQTIIAGWR Unmodified 1290.7197 0.71968982 159 P78371;F8VQ14;F5GWF6;P78371-2 CCT2 T-complex protein 1 subunit beta yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 64.319 64.269 3 0.052288 11325 Miao_Sh-H9_Flag_mass3_141226_03 41.109 19.033 0 0 0 0 0 0 0 0 0 0 0 0 0 1351 159 1329 12568 13650 13650 1 IHPTSVISGYR Unmodified 1228.6564 0.65642086 386 P17987;E7ERF2;F5H676;F5H136 TCP1 T-complex protein 1 subunit alpha yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 1 1 46.423 47.964 3 0.0030791 6267 Miao_Sh-H9_Flag_mass3_141226_03 74.533 64.162 5420.6 385.84 380.37 345.47 0 867.34 0 0 0 1281.6 1287.2 640.13 232.58 1352 386 1330 12569;12570;12571;12572;12573;12574;12575;12576 13651;13652;13653 13653 3 IHSDCAANQQVTYR Unmodified 1661.758 0.75800217 540 Q02413 DSG1 Desmoglein-1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 34.681 35.433 3 0.0026073 7309 Miao_Sh-H9_proteinG_mass3_141226_01 63.185 51.266 0 0 0 0 0 0 0 0 0 0 0 0 0 1353 540 1331 12577 13654 13654 1 IHVLPIDDTVEGITGNLFEVYLK Unmodified 2584.3789 0.3788556 483 P55072;C9JUP7;C9IZA5 VCP Transitional endoplasmic reticulum ATPase yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 1 1 2 2 2 2 112.94 113.01 3;4 3.0395E-42 27549 Miao_Sh-H9_Flag_mass3_141226_01 148.56 130.99 288890 38683 43415 39914 0 0 0 49137 57722 60018 0 0 0 1354 483 1332 12578;12579;12580;12581;12582;12583;12584;12585;12586;12587;12588;12589 13655;13656;13657;13658;13659;13660;13661;13662;13663;13664;13665;13666;13667;13668;13669;13670;13671;13672 13663 18 IIAATFLFK Unmodified 1022.6165 0.61645353 567 Q13907;Q13907-2 IDI1 Isopentenyl-diphosphate Delta-isomerase 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 80.897 85.459 2 0.02742 18256 Miao_Sh-c_proteinG_mass3_141226_02 64.711 19.63 0 0 0 0 0 0 0 0 0 0 0 0 0 1355 567 1333 12590 13673 13673 1 IIAATIENAQPILQIDNAR Unmodified 2063.1375 0.13750312 102 P08779;CON__P08779 KRT16 Keratin, type I cytoskeletal 16 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 1 2 1 1 94.861 85.839 3 8.9761E-21 28196 Miao_Sh-c_proteinG_mass3_141226_03 111.77 104.55 6184.3 0 0 0 0 0 0 0 0 0 0 6184.3 0 + 1356 102 1334 12591;12592;12593;12594;12595 13674;13675;13676;13677;13678;13679;13680 13676 7 IIAFVGSPVEDNEK Unmodified 1516.7773 0.77732386 481 P55036;Q5VWC4;P55036-2;A6PVX3 PSMD4 26S proteasome non-ATPase regulatory subunit 4 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 2 1 1 1 1 2 1 1 67.954 65.348 2 5.5372E-07 12097 Miao_Sh-H9_Flag_mass3_141226_03 128.68 103.83 36023 4578.3 164.96 6552.2 0 0 281.24 7359.1 9114.8 7515.2 186.6 0 270.43 1357 481 1335 12596;12597;12598;12599;12600;12601;12602;12603;12604;12605;12606 13681;13682;13683;13684;13685;13686;13687;13688;13689;13690 13688 10 IIAPPER Unmodified 794.46504 0.46503826 524;528;589 P63261;P60709;P63267-2;P68133;P68032;Q5T8M8;A6NL76;P63267;P62736;Q5T8M7;Q562R1 ACTG1;ACTB;ACTG2;ACTA1;ACTC1;ACTA2;ACTBL2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2 no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 2 1 1 1 1 36.109 37.601 2 9.9045E-05 8273 Miao_Sh-H9_proteinG_mass3_141226_01 148.54 62.649 153910 5704 4912.1 4505 3309 3423.1 0 0 0 0 52271 44473 35313 1358 524;528;589 1336 12607;12608;12609;12610;12611;12612;12613;12614;12615 13691;13692;13693;13694;13695;13696;13697;13698;13699;13700;13701;13702;13703;13704;13705;13706;13707 13701 17 IIDEVVNK Unmodified 928.52295 0.52294707 306 O95816;B4DXE2;A2A296 BAG2 BAG family molecular chaperone regulator 2 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 1 40.459 40.76 2 0.00061722 3899 Miao_Sh-c_Flag_mass3_141226_03 131.06 13.128 12201 2095.1 2008.4 2011.5 88.812 0 0 2201.5 2598.9 0 1196.9 0 0 1359 306 1337 12616;12617;12618;12619;12620;12621;12622 13708;13709;13710;13711;13712;13713;13714 13710 7 IIDTVAQVIVFQTYTNK Unmodified 1952.0619 0.06187856 664 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 111.14 102.12 3 0.00016029 35728 Miao_Sh-H9_proteinG_mass3_141226_02 69.805 61.735 0 0 0 0 0 0 0 0 0 0 0 0 0 1360 664 1338 12623 13715 13715 1 IIDVVYNASNNELVR Unmodified 1717.8999 0.89989861 499 P62241;Q5JR95 RPS8 40S ribosomal protein S8 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 3 1 3 1 1 1 5 5 9 78.051 74.707 2;3 2.6055E-29 18744 Miao_Sh-c_proteinG_mass3_141226_03 160.78 108.65 72784 449.68 2260.9 421.04 11168 8886.2 15595 598.98 0 1446.4 13381 8933 9643.3 1361 499 1339 12624;12625;12626;12627;12628;12629;12630;12631;12632;12633;12634;12635;12636;12637;12638;12639;12640;12641;12642;12643;12644;12645;12646;12647;12648;12649;12650;12651;12652;12653;12654;12655 13716;13717;13718;13719;13720;13721;13722;13723;13724;13725;13726;13727;13728;13729;13730;13731;13732;13733;13734;13735;13736 13718 21 IIENELEGFGIR Unmodified 1388.73 0.72997974 674 Q9Y295 DRG1 Developmentally-regulated GTP-binding protein 1 yes yes 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 78.686 79.037 2 0.041251 14848 Miao_Sh-c_Flag_mass3_141226_02 45.507 24.448 0 0 0 0 0 0 0 0 0 0 0 0 0 1362 674 1340 12656 13737 13737 1 IIGAVDQIQLTQAQLEER Unmodified 2024.0902 0.090218576 598 Q6NZI2;Q6NZI2-2 PTRF Polymerase I and transcript release factor yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 2 1 1 1 77.02 77.696 3 3.7917E-16 14154 Miao_Sh-c_Flag_mass3_141226_03 119.8 102.91 17722 4051.2 0 0 0 1126.3 0 5177.5 7367.3 0 0 0 0 1363 598 1341 12657;12658;12659;12660;12661;12662;12663 13738;13739;13740;13741;13742 13740 5 IIGLDQVAGMSETALPGAFK Unmodified 2017.0554 0.055412974 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 2 1 105.2 98.164 2;3 1.0371E-08 22915 Miao_Sh-c_proteinG_mass3_141226_02 79.383 56.021 20994 0 0 0 0 5536.4 0 1575.6 0 0 5097.6 4790.6 3993.5 1364 433 1342 12664;12665;12666;12667;12668;12669 13743;13744;13745;13746;13747;13748;13749;13750;13751 13743 9 IIIPEIQK Unmodified 952.59572 0.59571809 482 P55060;P55060-4;P55060-3;B4DUC5 CSE1L Exportin-2 yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 2 74.636 72.547 2 0.012669 28320 Miao_Sh-H9_proteinG_mass3_141226_02 85.212 2.9248 167780 0 0 40406 99889 0 0 0 0 0 0 27486 0 1365 482 1343 12670;12671;12672;12673 13752;13753;13754;13755 13755 4 IILDLISESPIK Unmodified 1339.7963 0.79626839 494 P61978;P61978-2;Q5T6W5;P61978-3;Q5T6W2;Q5T6W1 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 3 1 2 1 3 1 1 3 1 1 3 99.144 96.011 2 3.371E-43 35772 Miao_Sh-H9_proteinG_mass3_141226_02 188.91 136.33 109980 19436 750.1 7605.1 12082 0 11861 7981.7 22540 0 15215 12514 0 1366 494 1344 12674;12675;12676;12677;12678;12679;12680;12681;12682;12683;12684;12685;12686;12687;12688;12689;12690;12691;12692;12693 13756;13757;13758;13759;13760;13761;13762;13763;13764;13765;13766;13767;13768;13769;13770;13771;13772;13773;13774;13775;13776;13777;13778;13779 13775 24 IILLAEGR Unmodified 883.5491 0.54910224 403 P23526;P23526-2 AHCY Adenosylhomocysteinase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 2 58.177 58.745 2 0.0014719 9038 Miao_Sh-H9_Flag_mass3_141226_01 118.74 24.336 10276 580.53 0 0 1093.6 0 0 2194.3 3675.9 0 1280.5 0 1451.6 1367 403 1345 12694;12695;12696;12697;12698;12699;12700 13780;13781;13782 13780 3 IINADSEDPK Unmodified 1100.535 0.53496832 437 P35998;C9JLS9 PSMC2 26S protease regulatory subunit 7 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 2 2 1 34.337 34.211 2 0.0049684 3503 Miao_Sh-c_Flag_mass3_141226_01 86.189 55.577 1348.8 292 0 0 0 0 0 0 378.34 521.97 0 0 156.48 1368 437 1346 12701;12702;12703;12704;12705;12706;12707 13783;13784;13785;13786 13783 4 IINEPTAAAIAYGLDK Unmodified 1658.8879 0.88793694 355;356 P11021;P11142;E9PKE3;P11142-2;E9PN89;P54652;E9PLF4;E9PI65 HSPA5;HSPA8;HSPA2 78 kDa glucose-regulated protein;Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 3 2 2 2 4 4 2 4 8 12 8 83.022 78.865 2;3 4.5048E-30 14075 Miao_Sh-c_Flag_mass3_141226_01 160.81 107.21 662580 73698 73638 48035 67214 54279 31852 69578 62843 76979 28368 40768 35329 1369 355;356 1347 12708;12709;12710;12711;12712;12713;12714;12715;12716;12717;12718;12719;12720;12721;12722;12723;12724;12725;12726;12727;12728;12729;12730;12731;12732;12733;12734;12735;12736;12737;12738;12739;12740;12741;12742;12743;12744;12745;12746;12747;12748;12749;12750;12751;12752;12753;12754;12755;12756;12757;12758;12759;12760 13787;13788;13789;13790;13791;13792;13793;13794;13795;13796;13797;13798;13799;13800;13801;13802;13803;13804;13805;13806;13807;13808;13809;13810;13811;13812;13813;13814;13815;13816;13817;13818;13819;13820;13821;13822;13823;13824;13825;13826;13827;13828;13829;13830;13831;13832;13833;13834;13835;13836;13837;13838;13839;13840;13841;13842;13843;13844;13845;13846;13847;13848;13849;13850;13851;13852;13853;13854;13855;13856;13857;13858;13859;13860;13861;13862;13863;13864;13865;13866;13867;13868;13869;13870;13871;13872;13873;13874;13875;13876;13877;13878;13879;13880;13881;13882;13883;13884;13885;13886;13887;13888;13889;13890;13891;13892;13893;13894;13895;13896;13897;13898;13899;13900 13790 114 IINEPTAAAIAYGLDKR Unmodified 1814.989 0.98904797 355 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 0 1 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 1 1 1 69.281 71.226 3 2.4356E-08 12434 Miao_Sh-c_Flag_mass3_141226_02 93.768 68.915 26164 0 0 0 1673 3083.1 5299.5 6994.6 9114.1 0 0 0 0 1370 355 1348 12761;12762;12763;12764;12765;12766;12767;12768 13901;13902;13903;13904;13905;13906;13907 13902 7 IINEPTAAAIAYGLDR Unmodified 1686.8941 0.89408495 343;382 P08107;P08107-2;E7EP94;P17066 HSPA1A;HSPA6 Heat shock 70 kDa protein 1A/1B;Heat shock 70 kDa protein 6 no no 0 0 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching 2 2 1 1 2 84.88 80.477 2;3 1.0618E-05 14778 Miao_Sh-c_Flag_mass3_141226_01 81.594 37.99 10521 1601.8 0 0 0 2465 0 0 0 2243.8 0 0 4210.8 1371 343;382 1349 12769;12770;12771;12772;12773;12774;12775;12776 13908;13909;13910;13911;13912;13913;13914;13915 13910 8 IIQLLDDYPK Unmodified 1216.6703 0.67033959 326 P05388;F8VWS0;Q3B7A4;F8VU65;Q8NHW5;G3V210;F8VZS0;F8VS58;F8VQY6;F8VRK7 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 2 1 1 3 3 1 2 3 2 73.289 72.646 2 1.4395E-09 21725 Miao_Sh-H9_proteinG_mass3_141226_01 143.96 59.346 42417 0 3265.9 3160.9 5718.5 227.91 6762.3 1548.8 0 0 8881.9 6543.7 6306.6 1372 326 1350 12777;12778;12779;12780;12781;12782;12783;12784;12785;12786;12787;12788;12789;12790;12791;12792;12793;12794 13916;13917;13918;13919;13920;13921;13922;13923;13924;13925;13926;13927;13928;13929;13930;13931;13932;13933;13934;13935;13936 13926 21 IISNLFLGR Unmodified 1031.6128 0.61276513 227 Q92614;Q92614-4;J3KNX9;Q92614-3;Q92614-5;Q92614-2 MYO18A Unconventional myosin-XVIIIa yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 70.213 74.072 2 0.027538 14563 Miao_Sh-c_proteinG_mass3_141226_02 64.654 32.183 0 0 0 0 0 0 0 0 0 0 0 0 0 1373 227 1351 12795 13937 13937 1 IITEGFEAAK Unmodified 1077.5706 0.57062555 444 P40227;B4DPJ8;P40227-2 CCT6A T-complex protein 1 subunit zeta yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching 1 2 1 1 1 1 1 1 51.541 52.944 2 0.0021387 12334 Miao_Sh-H9_proteinG_mass3_141226_02 108.47 33.55 17378 825.58 322.29 832.59 0 317.62 0 0 4955.3 0 4550.6 4078.7 1495.2 1374 444 1352 12796;12797;12798;12799;12800;12801;12802;12803;12804 13938;13939;13940;13941 13940 4 IITHPNFNGNTLDNDIMLIK Oxidation (M) 2298.1678 0.16781697 95 CON__P00761 yes yes 0 0 1 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 1 4 1 2 2 2 3 5 5 2 88.78 85.106 2;3 1.3257E-56 33325 Miao_Sh-H9_proteinG_mass3_141226_01 165.19 138.35 244040 1073.6 0 16006 41279 39522 24897 28055 28338 34164 484.56 1437.6 28781 + 1375 95 1353 12805;12806;12807;12808;12809;12810;12811;12812;12813;12814;12815;12816;12817;12818;12819;12820;12821;12822;12823;12824;12825;12826;12827;12828;12829;12830;12831;12832;12833;12834 13942;13943;13944;13945;13946;13947;13948;13949;13950;13951;13952;13953;13954;13955;13956;13957;13958;13959;13960;13961;13962;13963;13964;13965;13966;13967;13968;13969;13970;13971;13972;13973;13974;13975 13965 11 33 IITHPNFNGNTLDNDIMLIK Unmodified 2282.1729 0.17290235 95 CON__P00761 yes yes 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 3 2 1 1 3 4 1 3 4 91.003 87.563 3;4 3.9322E-31 18221 Miao_Sh-c_proteinG_mass3_141226_01 139.11 116.67 270420 0 18894 2794.3 6813.4 58681 0 53580 41165 52479 18811 1455.4 15744 + 1376 95 1353 12835;12836;12837;12838;12839;12840;12841;12842;12843;12844;12845;12846;12847;12848;12849;12850;12851;12852;12853;12854;12855;12856;12857;12858;12859 13976;13977;13978;13979;13980;13981;13982;13983;13984;13985;13986;13987;13988;13989;13990;13991;13992;13993;13994;13995;13996;13997;13998;13999;14000;14001;14002;14003;14004 13982 29 IITITGTQDQIQNAQYLLQNSVK Unmodified 2588.381 0.38098087 494 P61978;P61978-2;Q5T6W5;P61978-3 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 3 1 1 4 3 5 99.726 94.914 3 1.1044E-40 33181 Miao_Sh-H9_proteinG_mass3_141226_02 122.18 107.82 53242 0 8038 0 13997 0 0 12808 0 15800 1317.3 0 1282.2 1377 494 1354 12860;12861;12862;12863;12864;12865;12866;12867;12868;12869;12870;12871;12872;12873;12874;12875;12876;12877;12878 14005;14006;14007;14008;14009;14010;14011;14012;14013;14014;14015;14016;14017;14018;14019;14020;14021;14022 14016 18 IITLAGPTNAIFK Unmodified 1357.7969 0.79693709 581 Q15366;Q15366-6;Q15366-3;Q15366-2;Q15366-4;Q15366-5;B4DLC0;H3BRU6;F8VZX2;B4DXP5;Q15366-7;F8W0G4;F8W1G6;F8VXH9 PCBP2 Poly(rC)-binding protein 2 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 2 1 1 1 1 80.482 81.534 2 7.9348E-05 15479 Miao_Sh-c_Flag_mass3_141226_02 104.26 65.256 22109 4713.5 6187.2 0 4637.8 5332.7 0 0 1237.7 0 0 0 0 1378 581 1355 12879;12880;12881;12882;12883;12884;12885 14023;14024;14025;14026;14027;14028 14025 6 IITLTGPTNAIFK Unmodified 1387.8075 0.80750177 580 Q15365 PCBP1 Poly(rC)-binding protein 1 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 3 3 2 97.54 87.866 2 0.00024409 15392 Miao_Sh-c_Flag_mass3_141226_02 82.774 38.232 7893.1 0 0 0 0 0 1415.1 1544 0 0 4934.1 0 0 1379 580 1356 12886;12887;12888;12889;12890;12891;12892;12893;12894;12895;12896;12897;12898 14029;14030;14031;14032;14033;14034;14035;14036;14037;14038;14039 14030 11 IIVENLFYPVTLDVLHQIFSK Unmodified 2487.3777 0.37773339 415 P26599;P26599-2;P26599-3;K7EK45;K7EKJ7;K7ES59 PTBP1 Polypyrimidine tract-binding protein 1 yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 120.2 120.4 3 3.5392E-06 29516 Miao_Sh-c_Flag_mass3_141226_02 64.749 55.183 21641 6543.9 5844.1 0 9253 0 0 0 0 0 0 0 0 1380 415 1357 12899;12900;12901 14040;14041;14042 14040 3 IKFEMEQNLR Unmodified 1306.6704 0.67035637 432 P35527;CON__P35527;K7EQQ3 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 0 1 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 55.973 57.201 3 0.011215 8391 Miao_Sh-c_proteinG_mass3_141226_02 70.028 45.998 1811.6 0 0 367.21 1444.4 0 0 0 0 0 0 0 0 + 1381 432 1358 12902;12903;12904;12905 14043;14044;14045 14044 3 ILAHNNFVGR Unmodified 1139.62 0.61997578 659 Q9NZI8;Q9NZI8-2 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 no no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 3 1 2 1 1 1 1 3 1 39.585 41.279 3 0.003273 4348 Miao_Sh-c_Flag_mass3_141226_01 78.264 59.824 4472.6 335.43 429.94 549.9 0 404.93 625.18 0 635.72 810.03 530.52 150.9 0 1382 659 1359 12906;12907;12908;12909;12910;12911;12912;12913;12914;12915;12916;12917;12918;12919;12920;12921 14046;14047;14048;14049;14050;14051;14052;14053 14046 8 ILAVFLAEYLGL Unmodified 1320.7693 0.76932535 655 Q9NXS2-3;Q9NXS2 QPCTL Glutaminyl-peptide cyclotransferase-like protein yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 122.6 123.3 2 0.00065534 30542 Miao_Sh-c_Flag_mass3_141226_03 109.83 100.64 2333.2 0 0 2333.2 0 0 0 0 0 0 0 0 0 1383 655 1360 12922 14054 14054 1 ILDAVVAQEPLHR Unmodified 1459.8147 0.81471242 244 Q15029;Q15029-2;K7EJ81;K7EP67;K7EJ74 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS 1 1 2 1 1 57.259 58.336 3 0.024385 8876 Miao_Sh-c_proteinG_mass3_141226_01 44.193 25.215 7128.7 0 606.37 0 698.12 0 0 2544.4 0 0 0 1425.8 1854 1384 244 1361 12923;12924;12925;12926;12927;12928 14055;14056;14057 14055 3 ILDDTEDTVVSQR Unmodified 1489.726 0.72601657 0 P42696;Q5TCT4;A2A2V2;P42696-2 RBM34 RNA-binding protein 34 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 49.856 51.586 2 0.0017518 12952 Miao_Sh-H9_proteinG_mass3_141226_01 72.891 55.226 0 0 0 0 0 0 0 0 0 0 0 0 0 1385 0 1362 12929;12930 14058;14059 14058 2 ILDQSEAEK Unmodified 1031.5135 0.5135046 573 Q14764 MVP Major vault protein yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 31.793 33.685 2 3.0381E-07 6105 Miao_Sh-H9_proteinG_mass3_141226_03 144.65 71.034 19940 0 0 76.403 1529.2 1501.6 4633.8 0 0 30.053 4421.2 4285.1 3462.3 1386 573 1363 12931;12932;12933;12934;12935;12936;12937;12938 14060;14061;14062;14063;14064;14065;14066;14067 14067 8 ILDSVGIEADDDR Unmodified 1416.6733 0.67325272 325 P05387 RPLP2 60S acidic ribosomal protein P2 yes yes 0 0 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 2 1 1 1 1 1 57.006 57.959 2 2.4092E-38 8643 Miao_Sh-H9_Flag_mass3_141226_02 173.59 137.94 13098 0 319.57 1488.2 1579.5 3808 2392.2 0 0 0 0 1138.9 2371.2 1387 325 1364 12939;12940;12941;12942;12943;12944;12945;12946;12947;12948 14068;14069;14070;14071;14072;14073;14074;14075;14076 14073 9 ILDSVGIEADDDRLNK Unmodified 1771.8952 0.89520716 325 P05387 RPLP2 60S acidic ribosomal protein P2 yes yes 0 0 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 4 7 3 6 2 1 3 4 6 5 67.332 65.868 2;3 4.5377E-39 8720 Miao_Sh-c_proteinG_mass3_141226_01 173.71 107.52 231040 7602.6 10512 835.08 28923 10652 31088 11487 14620 10018 49473 33298 22535 1388 325 1365 12949;12950;12951;12952;12953;12954;12955;12956;12957;12958;12959;12960;12961;12962;12963;12964;12965;12966;12967;12968;12969;12970;12971;12972;12973;12974;12975;12976;12977;12978;12979;12980;12981;12982;12983;12984;12985;12986;12987;12988;12989;12990;12991;12992 14077;14078;14079;14080;14081;14082;14083;14084;14085;14086;14087;14088;14089;14090;14091;14092;14093;14094;14095;14096;14097;14098;14099;14100;14101;14102;14103;14104;14105;14106;14107;14108;14109;14110;14111;14112;14113;14114;14115;14116;14117;14118;14119;14120 14085 44 ILELDQFK Unmodified 1004.5542 0.5542472 363 P12956;B1AHC8;B1AHC9 XRCC6 X-ray repair cross-complementing protein 6 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 1 2 2 1 1 1 68.97 69.17 2 0.027888 12898 Miao_Sh-c_proteinG_mass3_141226_02 75.738 11.474 12932 0 692.33 616.04 1544.1 2234.1 2414 1164.9 1643.1 0 2623.6 0 0 1389 363 1366 12993;12994;12995;12996;12997;12998;12999;13000;13001;13002 14121;14122;14123;14124;14125 14123 5 ILFRPVASQLPR Unmodified 1395.8351 0.83505393 85 P35232;C9JW96;C9JZ20;E7ESE2;E9PCW0;D6RBK0;P35232-2 PHB Prohibitin yes no 0 0 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 63.82 64.07 3 0.0036715 9720 Miao_Sh-c_Flag_mass3_141226_01 67.879 44.051 8881.4 0 0 1466.4 726.17 0 0 1705.6 2494.9 2488.3 0 0 0 1390 85 1367 13003;13004;13005;13006;13007;13008 14126;14127;14128;14129;14130 14126 5 ILGADTSVDLEETGR Unmodified 1574.7788 0.77878042 410 P25705;P25705-2;P25705-3;K7EK77;K7ERX7;K7EJP1;K7EQH4;K7ESA0 ATP5A1 ATP synthase subunit alpha, mitochondrial yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 2 1 1 1 2 2 1 4 2 63.715 62.791 2 7.9758E-09 10353 Miao_Sh-H9_Flag_mass3_141226_01 112.62 62.271 10664 963.72 1095.3 966.96 0 0 2484.9 0 0 0 363.28 0 4790.1 1391 410 1368 13009;13010;13011;13012;13013;13014;13015;13016;13017;13018;13019;13020;13021;13022;13023;13024 14131;14132;14133;14134;14135;14136;14137;14138;14139;14140;14141;14142;14143;14144;14145;14146;14147 14140 17 ILGLLDAYLK Unmodified 1117.6747 0.67469669 417 P26641;B4DTG2 EEF1G Elongation factor 1-gamma yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 2 1 2 1 1 1 103.27 102.22 2 0.000427 19634 Miao_Sh-c_Flag_mass3_141226_03 121.5 76.167 55728 6705.2 4396.6 4489.8 5014.7 0 0 9929.7 9412.3 9583.3 6196.6 0 0 1392 417 1369 13025;13026;13027;13028;13029;13030;13031;13032;13033;13034;13035;13036;13037;13038 14148;14149;14150;14151;14152;14153;14154;14155;14156;14157;14158;14159;14160;14161;14162;14163;14164;14165;14166;14167;14168;14169;14170 14154 23 ILGPGLNK Unmodified 810.49634 0.49633839 519 P62906 RPL10A 60S ribosomal protein L10a yes yes 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1 1 1 41.499 43.103 2 0.0031825 8607 Miao_Sh-c_proteinG_mass3_141226_03 113.1 51.979 128950 0 2400.9 2016.4 1907.7 2092.8 32018 2293.3 3002.2 3350.4 24578 31260 24031 1393 519 1370 13039;13040;13041;13042;13043;13044;13045;13046;13047;13048;13049 14171;14172;14173;14174;14175;14176;14177;14178;14179;14180;14181;14182 14175 12 ILGPQGNTIK Unmodified 1039.6026 0.60259438 547 Q07666;Q07666-2 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 2 1 1 40.413 42.926 2 0.0016797 8703 Miao_Sh-c_proteinG_mass3_141226_03 101.38 44.1 13639 0 0 342.14 288.97 400.35 5358.3 425.19 0 0 0 3307 3517.1 1394 547 1371 13050;13051;13052;13053;13054;13055;13056;13057;13058;13059 14183;14184;14185;14186;14187;14188;14189;14190;14191 14184 9 ILGYIVEMQTKGSDK Unmodified 1680.8757 0.87565769 620 Q8WZ42;Q8WZ42-3;Q8WZ42-10;Q8WZ42-9;Q8WZ42-5;Q8WZ42-11;Q8WZ42-4;Q8WZ42-7;Q8WZ42-2;Q8WZ42-8;Q8WZ42-13;Q8WZ42-12 TTN Titin yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 1 1 79.645 76.594 3 0.02507 15605 Miao_Sh-H9_Flag_mass3_141226_01 48.467 2.6377 32303 6613.5 0 2573.7 0 5928.8 0 8826.9 0 7256 0 306.47 797.69 1395 620 1372 13060;13061;13062;13063;13064;13065;13066 14192 14192 1 ILHLLGQEGPK Unmodified 1203.6976 0.69755739 683 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 52.398 53.281 3 0.0274 7633 Miao_Sh-H9_Flag_mass3_141226_01 46.352 35.487 1232.2 0 0 199.27 244.61 0 0 788.33 0 0 0 0 0 1396 683 1373 13067;13068;13069 14193 14193 1 ILLAELEQLK Unmodified 1168.7067 0.7067251 346 P08670;B0YJC4 VIM Vimentin yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 3 1 2 3 1 1 1 1 92.271 89.128 2 2.1219E-18 34009 Miao_Sh-H9_proteinG_mass3_141226_01 160.33 94.799 142550 145.01 7422.6 8534.4 25530 14905 12652 13037 3853.7 13161 16741 14081 12484 1397 346 1374 13070;13071;13072;13073;13074;13075;13076;13077;13078;13079;13080;13081;13082;13083;13084;13085;13086;13087 14194;14195;14196;14197;14198;14199;14200;14201;14202;14203;14204;14205;14206;14207;14208;14209;14210;14211;14212;14213;14214;14215;14216;14217;14218;14219;14220;14221;14222;14223;14224 14215 31 ILLLTLLFEELK Unmodified 1443.8953 0.89525415 600 Q7Z6Z7;Q7Z6Z7-2;Q7Z6Z7-3;H0Y5W0;Q5H962 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 122.61 123.26 2 0.00114 32736 Miao_Sh-H9_Flag_mass3_141226_03 78.324 10.427 0 0 0 0 0 0 0 0 0 0 0 0 0 1398 600 1375 13088 14225 14225 1 ILMQVMNLNVPMR Oxidation (M) 1573.8143 0.81426019 11 A8MZ97 C2orf74 Uncharacterized protein C2orf74 yes yes 0 0 1 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 65.566 64.563 2 0.014158 11416 Miao_Sh-H9_Flag_mass3_141226_02 55.04 6.6167 8913.3 0 0 0 0 0 0 0 8913.3 0 0 0 0 1399 11 1376 13089 14226;14227 14226 0 2 ILNDVQDR Unmodified 971.50361 0.50360861 175 O00148;Q13838;F8VQ10;Q13838-2;H0Y400;B4DP52 DDX39A;DDX39B;hCG_2005638 ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 1 1 1 35.841 37.188 2 0.00021448 3510 Miao_Sh-c_Flag_mass3_141226_02 138.08 52.815 8562.8 802.47 1627 1625 681.95 1144.1 0 0 0 1566.8 0 516.52 599.02 1400 175 1377 13090;13091;13092;13093;13094;13095;13096;13097;13098 14228;14229;14230;14231;14232;14233;14234;14235 14229 8 ILNFLMHPK Unmodified 1111.6212 0.62122133 436 P35659;B4DFG0;P35659-2;D6RDA2;H0Y8X0 DEK Protein DEK yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 82.702 84.156 2 0.039116 18211 Miao_Sh-c_proteinG_mass3_141226_01 58.981 6.2646 0 0 0 0 0 0 0 0 0 0 0 0 0 1401 436 1378 13099 14236 14236 1 ILPTLEAVAALGNK Unmodified 1408.829 0.8289655 552 Q12905;X6R6Z1 ILF2 Interleukin enhancer-binding factor 2 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 2 1 1 2 4 1 94.878 90.135 2;3 0.00026915 34984 Miao_Sh-H9_proteinG_mass3_141226_03 85.536 56.119 14591 0 1435.7 411.63 4253.4 0 0 703.59 0 0 1587.3 3799.4 2400.1 1402 552 1379 13100;13101;13102;13103;13104;13105;13106;13107;13108;13109;13110;13111;13112;13113 14237;14238;14239;14240;14241;14242;14243;14244 14244 8 ILQAGFK Unmodified 775.45922 0.4592246 583 Q15691 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 43.621 44.574 2 0.0278 10566 Miao_Sh-H9_proteinG_mass3_141226_01 75.311 17.847 0 0 0 0 0 0 0 0 0 0 0 0 0 1403 583 1380 13114 14245 14245 1 ILQDDVACDIIK Unmodified 1401.7174 0.71736614 565 Q13601;Q13601-2 KRR1 KRR1 small subunit processome component homolog yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 65.588 68.596 2 0.016648 17934 Miao_Sh-c_proteinG_mass3_141226_03 56.087 30.465 0 0 0 0 0 0 0 0 0 0 0 0 0 1404 565 1381 13115;13116 14246;14247 14246 2 ILQDSLGGR Unmodified 957.52434 0.52434406 473 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 43.47 43.921 2 0.0023945 4273 Miao_Sh-c_Flag_mass3_141226_03 95.358 30.601 5339.1 675.61 619.86 545.9 0 0 0 0 0 51.991 3445.7 0 0 1405 473 1382 13117;13118;13119;13120;13121 14248;14249;14250;14251 14251 4 ILQEYITQEGHK Unmodified 1457.7514 0.75144346 25 Q9BXS5;K7EJL1;B4DDG7;E7ENJ6;Q9BXS5-2;K7EPJ8 AP1M1 AP-1 complex subunit mu-1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 48.472 49.801 3 0.037441 11472 Miao_Sh-H9_proteinG_mass3_141226_03 40.475 18.483 6607.9 0 0 0 379.99 0 0 0 0 227.37 3971.4 0 2029.2 1406 25 1383 13122;13123;13124;13125 14252 14252 1 ILQNEPLPER Unmodified 1207.6561 0.65608651 305 O95793;Q5JW30;O95793-2;O95793-3;Q5JW28;F6UDC6 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 47.738 48.527 2 2.7868E-07 11390 Miao_Sh-H9_proteinG_mass3_141226_02 133.42 65.021 0 0 0 0 0 0 0 0 0 0 0 0 0 1407 305 1384 13126;13127;13128;13129 14253;14254;14255;14256 14256 4 ILQVSFK Unmodified 833.50109 0.50108942 46 Q15717;B4DVB8 ELAVL1 ELAV-like protein 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 56.083 56.745 2 0.033955 15811 Miao_Sh-H9_proteinG_mass3_141226_01 66.073 10.632 6686.3 0 958.53 0 0 0 0 1117.9 0 1277.3 1734.3 1598.3 0 1408 46 1385 13130;13131;13132;13133;13134 14257 14257 0 ILSAENIPNLPPGGGLAGK Unmodified 1817.0047 0.0046980325 297;296 O75688-2;C9JIR6;O75688-4;B8ZZF0;O75688;O75688-3 PPM1B Protein phosphatase 1B no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 3 8 6 1 10 7 6 74.284 74.468 2;3 1.3194E-20 14758 Miao_Sh-H9_Flag_mass3_141226_03 111.65 87.745 161030 16203 23294 20926 351.05 0 0 28051 38202 34006 0 0 0 1409 297;296 1386 13135;13136;13137;13138;13139;13140;13141;13142;13143;13144;13145;13146;13147;13148;13149;13150;13151;13152;13153;13154;13155;13156;13157;13158;13159;13160;13161;13162;13163;13164;13165;13166;13167;13168;13169;13170;13171;13172;13173;13174;13175 14258;14259;14260;14261;14262;14263;14264;14265;14266;14267;14268;14269;14270;14271;14272;14273;14274;14275;14276;14277;14278;14279;14280;14281;14282;14283;14284;14285;14286;14287;14288;14289;14290;14291;14292;14293;14294;14295;14296;14297;14298;14299;14300;14301;14302;14303;14304;14305;14306;14307;14308;14309;14310;14311;14312;14313;14314;14315;14316;14317;14318;14319;14320;14321;14322;14323;14324;14325;14326;14327;14328;14329;14330;14331;14332;14333;14334;14335;14336;14337;14338;14339;14340;14341;14342 14341 85 ILSGVVTK Unmodified 815.51165 0.5116541 254 P62280;M0QZC5 RPS11 40S ribosomal protein S11 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 1 1 1 1 1 40.527 41.951 2 0.0044792 9620 Miao_Sh-H9_proteinG_mass3_141226_01 106.42 31.21 66529 1642.4 1331.8 1226.4 1236.3 1123.2 13702 1457.9 1615.3 1589.2 15427 13842 12335 1410 254 1387 13176;13177;13178;13179;13180;13181;13182;13183;13184;13185;13186;13187 14343;14344;14345;14346;14347;14348;14349;14350;14351 14350 9 ILSISADIETIGEILK Unmodified 1713.9764 0.9764176 494 P61978;P61978-2;Q5T6W5;P61978-3;Q5T6W2;Q5T6W1 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 3 4 2 2 3 2 5 3 3 112.5 110.55 2;3 2.22E-17 28185 Miao_Sh-H9_Flag_mass3_141226_01 147.51 112.74 60804 3530.8 5235.1 5389 15908 0 0 5728.7 8450.5 8497 0 0 8064.6 1411 494 1388 13188;13189;13190;13191;13192;13193;13194;13195;13196;13197;13198;13199;13200;13201;13202;13203;13204;13205;13206;13207;13208;13209;13210;13211;13212;13213;13214 14352;14353;14354;14355;14356;14357;14358;14359;14360;14361;14362;14363;14364;14365;14366;14367;14368;14369;14370;14371;14372;14373;14374;14375;14376;14377;14378;14379;14380;14381;14382;14383;14384;14385;14386 14369 35 ILSTIDR Unmodified 816.47052 0.47051757 453 P43686;P43686-2 PSMC4 26S protease regulatory subunit 6B yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 1 40.318 40.368 2 0.0049124 3847 Miao_Sh-c_Flag_mass3_141226_03 117.16 19.558 4268.2 0 678.38 625.6 0 0 0 548.64 682.77 831.23 901.57 0 0 1412 453 1389 13215;13216;13217;13218;13219;13220 14387;14388;14389 14389 3 ILTATVDNANVLLQIDNAR Unmodified 2053.1168 0.11676768 97 P02533;CON__P02533 KRT14 Keratin, type I cytoskeletal 14 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 102.26 89.148 3 5.1246E-11 31770 Miao_Sh-H9_proteinG_mass3_141226_03 94.281 61.579 5839.7 0 0 0 0 0 0 0 0 0 0 1615.7 4224.1 + 1413 97 1390 13221;13222;13223;13224 14390;14391;14392;14393 14393 3 ILTEAEIDAHLVALAER Unmodified 1863.0102 0.010177341 194 P60900;H0YJC4;G3V5Z7;P60900-3;P60900-2 PSMA6 Proteasome subunit alpha type-6;Proteasome subunit alpha type yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 89.559 89.108 3 0.0029748 20065 Miao_Sh-H9_Flag_mass3_141226_03 51.495 38.703 0 0 0 0 0 0 0 0 0 0 0 0 0 1414 194 1391 13225 14394 14394 1 ILTFDQLALDSPK Unmodified 1459.7922 0.79224564 190 Q07020;G3V203;J3QQ67;H0YHA7;F8VWC5;F8VUA6 RPL18 60S ribosomal protein L18 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 1 4 1 2 1 5 1 3 95.908 88.635 2;3 5.2473E-57 17824 Miao_Sh-c_proteinG_mass3_141226_02 192.39 157.62 70948 0 0 3747.2 17468 14522 8366.4 0 1343.1 1521.1 4713.9 1652.9 17613 1415 190 1392 13226;13227;13228;13229;13230;13231;13232;13233;13234;13235;13236;13237;13238;13239;13240;13241;13242;13243;13244;13245;13246;13247;13248;13249 14395;14396;14397;14398;14399;14400;14401;14402;14403;14404;14405;14406;14407;14408;14409;14410;14411;14412;14413;14414;14415;14416;14417;14418;14419;14420;14421;14422;14423;14424;14425;14426;14427 14402 33 ILTTNTWSSELSK Unmodified 1478.7617 0.76167379 288 O60701;O60701-3;O60701-2 UGDH UDP-glucose 6-dehydrogenase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 64.86 67.166 2 0.012416 18608 Miao_Sh-H9_proteinG_mass3_141226_02 55.196 27.866 0 0 0 0 0 0 0 0 0 0 0 0 0 1416 288 1393 13250 14428 14428 1 ILVATNLFGR Unmodified 1102.6499 0.64987892 175 O00148;Q13838;F8VQ10;Q13838-2;H0Y400;B4DP52;Q5STU3 DDX39A;DDX39B;hCG_2005638 ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By matching 2 1 1 1 1 75.423 75.122 2 1.5817E-06 15376 Miao_Sh-H9_Flag_mass3_141226_01 137.95 46.327 5146.1 0 0 0 0 0 0 4073 0 1073 0 0 0 1417 175 1394 13251;13252;13253;13254;13255;13256 14429;14430;14431;14432;14433 14432 5 ILYDILAFAK Unmodified 1165.6747 0.67469669 609 Q8IXB1;Q8IXB1-2 DNAJC10 DnaJ homolog subfamily C member 10 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 2 1 2 2 2 2 1 1 2 2 1 103.63 100.04 2 0.002204 37484 Miao_Sh-H9_proteinG_mass3_141226_01 112.13 65.673 86379 0 5281.1 3565.1 16436 10197 13049 6470.3 4679.8 4284.9 17312 0 5103.6 1418 609 1395 13257;13258;13259;13260;13261;13262;13263;13264;13265;13266;13267;13268;13269;13270;13271;13272;13273;13274 14434;14435;14436;14437;14438;14439;14440;14441;14442;14443 14439 10 ILYLTPEQEK Unmodified 1232.6653 0.66525421 510 P62495;B7Z7P8;Q96CG1 ETF1 Eukaryotic peptide chain release factor subunit 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 2 1 1 54.846 56.859 2 3.0527E-34 13861 Miao_Sh-c_proteinG_mass3_141226_03 172.88 104.51 53772 1397.9 0 1039.4 6566.8 6579.5 0 0 0 0 0 19754 18435 1419 510 1396 13275;13276;13277;13278;13279;13280;13281;13282 14444;14445;14446;14447;14448;14449;14450;14451;14452;14453 14449 10 ILYNPLQGQK Unmodified 1172.6554 0.65535823 268 O00622 CYR61 Protein CYR61 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 59.905 61.058 2 0.037387 9697 Miao_Sh-c_proteinG_mass3_141226_01 55.064 28.68 0 0 0 0 0 0 0 0 0 0 0 0 0 1420 268 1397 13283 14454 14454 1 ILYSQCGDVMR Oxidation (M) 1356.6166 0.61660624 370;179;198 P60660;P60660-2;F8W1R7;G3V1V0;B7Z6Z4;F8VPF3;J3KND3;G8JLA2;P14649;F8W1I5 MYL6;PDE6H;MYL6B Myosin light polypeptide 6;Myosin light chain 6B no no 0 0 1 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 1 1 1 43.372 44.514 2 0.00088931 9751 Miao_Sh-H9_proteinG_mass3_141226_03 104.07 68.162 14872 697.78 605.8 916.51 878.44 63.7 0 1361.1 0 52 5930.8 0 4365.4 1421 179;198;370 1398 13284;13285;13286;13287;13288;13289;13290;13291;13292;13293 14455;14456;14457;14458;14459;14460;14461 14461 19 6 ILYSQCGDVMR Unmodified 1340.6217 0.62169161 370;179;198 P60660;P60660-2;F8W1R7;G3V1V0;B7Z6Z4;F8VPF3;J3KND3;G8JLA2;P14649;F8W1I5 MYL6;PDE6H;MYL6B Myosin light polypeptide 6;Myosin light chain 6B no no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 1 1 1 2 2 52.195 53.888 2 5.166E-50 6873 Miao_Sh-c_proteinG_mass3_141226_02 197.07 159.73 64001 0 5835 287.3 7772.8 5510.8 8308.4 2251.6 11678 0 12415 9941.2 0 1422 179;198;370 1398 13294;13295;13296;13297;13298;13299;13300;13301;13302;13303;13304;13305;13306;13307 14462;14463;14464;14465;14466;14467;14468;14469;14470;14471;14472;14473;14474;14475;14476;14477;14478;14479;14480;14481 14467 20 IMNTFSVVPSPK Unmodified 1318.6955 0.69550848 338;530;315;564 P07437;Q5JP53;Q5ST81;G3V2A3;P68371;M0R2D3;P04350;M0R042;M0QYM7;Q13509;Q13509-2 TUBB;TUBB3;TUBB4B;TUBB4A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-3 chain no no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 2 2 3 2 1 1 2 65.611 66.206 2 0.00014847 12248 Miao_Sh-H9_Flag_mass3_141226_02 119.17 86.848 45123 2839.8 2616.6 0 1930.3 1793.2 4731.2 4951 6179.6 9180.9 1159.1 4238.9 5501.9 1423 338;530;315;564 1399 13308;13309;13310;13311;13312;13313;13314;13315;13316;13317;13318;13319;13320;13321;13322;13323;13324 14482;14483;14484;14485;14486;14487;14488;14489;14490;14491;14492;14493 14492 12 IMNTFSVVPSPK Oxidation (M) 1334.6904 0.69042311 338;530;315;564 P07437;Q5JP53;Q5ST81;G3V2A3;P68371;M0R2D3;P04350;M0R042;M0QYM7;Q13509;Q13509-2 TUBB;TUBB3;TUBB4B;TUBB4A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-3 chain no no 0 0 1 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 59.619 59.468 2 0.030326 9338 Miao_Sh-H9_Flag_mass3_141226_01 58.32 39.188 0 0 0 0 0 0 0 0 0 0 0 0 0 1424 338;530;315;564 1399 13325 14494 14494 40 1 INEAIVAVQAIIADPK Unmodified 1663.9509 0.95087155 670 Q9Y224 C14orf166 UPF0568 protein C14orf166 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 2 6 3 1 4 1 2 2 4 2 2 104.05 98.631 2;3 5.3628E-11 36538 Miao_Sh-H9_proteinG_mass3_141226_01 122.14 96.026 52304 2324.6 1056.1 2675.7 4339.7 3992.6 5386.1 3023.9 10621 3388 9016.1 0 6479.6 1425 670 1400 13326;13327;13328;13329;13330;13331;13332;13333;13334;13335;13336;13337;13338;13339;13340;13341;13342;13343;13344;13345;13346;13347;13348;13349;13350;13351;13352;13353;13354;13355;13356 14495;14496;14497;14498;14499;14500;14501;14502;14503;14504;14505;14506;14507;14508;14509;14510;14511;14512;14513;14514;14515;14516;14517 14514 23 INEEISVK Unmodified 930.50221 0.50221163 643 Q9BUJ2;Q9BUJ2-2;B7Z4B8;Q9BUJ2-4;M0R3F1;M0QYZ0;M0QYI8;M0QYM5 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 37.926 41.004 2 0.002989 8884 Miao_Sh-H9_proteinG_mass3_141226_03 113.74 61.024 23979 356.96 0 0 0 1046.7 6842.4 0 0 0 0 8293.7 7438.9 1426 643 1401 13357;13358;13359;13360;13361 14518;14519;14520;14521;14522;14523 14522 6 INEILSNALK Unmodified 1113.6394 0.63937381 471 P52272;P52272-2;M0R019 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 2 1 63.666 64.206 2 0.0012226 17807 Miao_Sh-H9_proteinG_mass3_141226_01 117.14 38.366 23376 1253.9 0 0 1671.2 1441 4130.3 1917.1 0 2021.3 5329.8 1011.3 4599.7 1427 471 1402 13362;13363;13364;13365;13366;13367;13368;13369;13370;13371 14524;14525;14526;14527;14528;14529;14530;14531;14532 14530 9 INFDVNGYIVGANIETYLLEK Unmodified 2384.2264 0.22637771 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 2 1 1 1 2 1 1 3 1 1 110.94 111.65 2;3 4.6786E-35 28133 Miao_Sh-H9_Flag_mass3_141226_02 146.3 129.67 105490 15313 15704 0 0 13247 0 16104 24496 20622 0 0 0 1428 433 1403 13372;13373;13374;13375;13376;13377;13378;13379;13380;13381;13382;13383;13384;13385;13386 14533;14534;14535;14536;14537;14538;14539;14540;14541;14542;14543;14544;14545;14546;14547;14548;14549;14550;14551;14552;14553;14554;14555;14556;14557;14558;14559;14560 14550 28 INFDVTGYIVGANIETYLLEK Unmodified 2371.2311 0.23112873 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 no no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 1 2 3 1 1 1 114.69 115.12 3 8.1803E-11 26956 Miao_Sh-c_Flag_mass3_141226_02 81.808 69.607 28037 787.95 9198.3 5388.1 9360.1 1184.6 0 195.68 0 845.61 0 1076.2 0 1429 434 1404 13387;13388;13389;13390;13391;13392;13393;13394;13395;13396;13397 14561;14562;14563;14564;14565 14561 5 INLIAPPR Unmodified 892.54944 0.54943659 323 P05198;H0YJS4;G3V4T5 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 53.4 55.044 2 0.021169 14917 Miao_Sh-H9_proteinG_mass3_141226_01 75.738 17.571 1910.5 175.58 285.66 136.19 0 322.2 0 0 0 0 0 990.84 0 1430 323 1405 13398;13399;13400;13401;13402;13403 14566;14567 14566 2 INNVIDNLIVAPGTFEVQIEEVR Unmodified 2581.3752 0.37516721 552 Q12905;X6R6Z1 ILF2 Interleukin enhancer-binding factor 2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 117.82 100.63 3 1.758E-33 37914 Miao_Sh-H9_proteinG_mass3_141226_03 111.44 100.01 0 0 0 0 0 0 0 0 0 0 0 0 0 1431 552 1406 13404 14568 14568 1 INVNEIFYDLVR Unmodified 1493.7878 0.78782897 5 P61224;P62834;A6NIZ1;F5H823;B7ZB78;F5GZG1;P61224-2;P61224-4;P61224-3 RAP1B;RAP1A Ras-related protein Rap-1b;Ras-related protein Rap-1A;Ras-related protein Rap-1b-like protein yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 108.87 108.12 2 0.0026394 26043 Miao_Sh-H9_Flag_mass3_141226_01 72.891 50.205 0 0 0 0 0 0 0 0 0 0 0 0 0 1432 5 1407 13405 14569 14569 1 INVYYNEATGGK Unmodified 1327.6408 0.64083038 530 P68371 TUBB4B Tubulin beta-4B chain yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 1 2 2 1 2 1 3 2 49.372 51.077 2 4.5357E-42 12652 Miao_Sh-H9_proteinG_mass3_141226_01 184.98 130.77 41161 2085.9 2569.2 3291.7 0 1262.6 11237 0 3597.2 4476.5 10874 1767.3 0 1433 530 1408 13406;13407;13408;13409;13410;13411;13412;13413;13414;13415;13416;13417;13418;13419;13420;13421;13422;13423;13424 14570;14571;14572;14573;14574;14575;14576;14577;14578;14579;14580;14581;14582;14583;14584 14580 15 INVYYNESSSQK Unmodified 1430.6678 0.66777341 642 Q9BUF5;K7EL29;K7EN98;K7ESQ3;K7EQT3;K7EJ64;K7ERA8;K7EJZ4;K7EPE5 TUBB6 Tubulin beta-6 chain yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 42.767 44.496 2 0.028255 5424 Miao_Sh-H9_Flag_mass3_141226_02 53.448 41.865 1751.3 0 35.903 332.44 0 0 696.79 0 686.19 0 0 0 0 1434 642 1409 13425;13426;13427;13428 14585;14586 14586 2 IPDPEAVKPDDWDEDAPAK Unmodified 2106.9746 0.9745797 29 P27824;B4DGP8;B4E2T8;D6RGY2 CANX Calnexin yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 61.856 63.56 3 0.010712 15981 Miao_Sh-c_proteinG_mass3_141226_03 47.113 35.195 4054.8 0 1629.8 0 0 0 1641.3 0 783.73 0 0 0 0 1435 29 1410 13429;13430;13431 14587 14587 1 IPDWFLNR Unmodified 1059.5502 0.55016488 503 P62269;J3JS69 RPS18 40S ribosomal protein S18 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 3 2 2 1 2 2 3 4 2 1 82.592 82.301 2 2.1791E-12 15195 Miao_Sh-c_Flag_mass3_141226_01 165.52 106.82 145560 15777 686.3 0 17036 90125 0 1912.3 623.02 15230 4167.4 0 0 1436 503 1411 13432;13433;13434;13435;13436;13437;13438;13439;13440;13441;13442;13443;13444;13445;13446;13447;13448;13449;13450;13451;13452;13453 14588;14589;14590;14591;14592;14593;14594;14595;14596;14597;14598;14599;14600;14601;14602;14603;14604;14605;14606;14607;14608;14609 14588 22 IPFFDDVGAVTLQYFDTLFQR Unmodified 2491.2424 0.24236212 599 Q6P3W7;F8VSC5 SCYL2 SCY1-like protein 2 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 122.75 119.87 3 1.8737E-09 30264 Miao_Sh-c_Flag_mass3_141226_03 73.722 63.455 23248 6607.7 0 9205.1 0 0 0 27.441 0 0 7408.1 0 0 1437 599 1412 13454;13455;13456;13457 14610;14611;14612;14613;14614;14615 14612 6 IPPNATLVFEVELFEFK Unmodified 1992.0608 0.060815928 541 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 2 1 1 1 112.92 113.33 3 0.00020801 26659 Miao_Sh-c_Flag_mass3_141226_03 67.645 51.422 5850 522.63 1545.9 1140.3 809.62 0 0 1159.2 0 672.34 0 0 0 1438 541 1413 13458;13459;13460;13461;13462;13463;13464 14616;14617 14617 2 IPPYHYIHVLDQNSNVSR Unmodified 2151.0861 0.086136251 573 Q14764;H3BQK6;H3BRL2;H3BUK7;H3BNF6;H3BP76;H3BPZ2;H3BNF2;H3BUP3;H3BQE7 MVP Major vault protein yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 4 2 6 1 2 5 4 86.197 82.398 3;4 8.742E-46 9744 Miao_Sh-c_proteinG_mass3_141226_01 174.78 144.21 173930 2438.7 589.63 303.01 31579 25874 35774 1524.9 0 0 20369 33799 21679 1439 573 1414 13465;13466;13467;13468;13469;13470;13471;13472;13473;13474;13475;13476;13477;13478;13479;13480;13481;13482;13483;13484;13485;13486;13487;13488;13489;13490;13491 14618;14619;14620;14621;14622;14623;14624;14625;14626;14627;14628;14629;14630;14631;14632;14633;14634;14635;14636;14637;14638;14639;14640;14641;14642;14643;14644;14645;14646;14647;14648;14649;14650;14651;14652;14653;14654;14655;14656;14657;14658;14659;14660;14661 14619 44 IPVDTYNNILTVLK Unmodified 1601.9029 0.90285872 635 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 93.109 92.783 2 0.0059853 21383 Miao_Sh-H9_Flag_mass3_141226_02 58.079 33.654 0 0 0 0 0 0 0 0 0 0 0 0 0 1440 635 1415 13492;13493 14662;14663 14662 2 IPVGPETLGR Unmodified 1037.5869 0.58694431 331 P06576;H0YH81;F8VPV9;F8W079 ATP5B ATP synthase subunit beta, mitochondrial;ATP synthase subunit beta yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 52.182 53.777 2 0.0068812 12648 Miao_Sh-H9_proteinG_mass3_141226_03 81.099 26.894 10054 718.96 0 0 0 0 472.76 1367.4 0 1765.8 3511 0 2217.7 1441 331 1416 13494;13495;13496;13497;13498;13499 14664;14665 14665 2 IPWFQYPIIYDIR Unmodified 1722.9134 0.91336383 161 Q99623;F5GY37;J3KPX7;Q99623-2;F5H0C5 PHB2 Prohibitin-2 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 2 1 1 108.35 108.51 2;3 0.00016682 24395 Miao_Sh-c_Flag_mass3_141226_03 83.137 63.357 5503 0 1661.9 1386.3 0 0 0 1124.4 0 1330.4 0 0 0 1442 161 1417 13500;13501;13502;13503;13504;13505 14666;14667;14668;14669;14670;14671;14672;14673 14667 8 IQALQQQADEAEDR Unmodified 1613.7645 0.76452734 526 P67936 TPM4 Tropomyosin alpha-4 chain yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 2 2 2 43.752 47.173 2 7.5071E-14 10956 Miao_Sh-H9_proteinG_mass3_141226_02 137.93 113.47 21452 74.507 0 0 0 0 17203 0 0 0 4175.2 0 0 1443 526 1418 13506;13507;13508;13509;13510;13511;13512;13513;13514 14674;14675;14676;14677;14678;14679;14680;14681 14679 8 IQDALSTVLQYAEDVLSGK Unmodified 2049.063 0.063000772 21 O00303;H0YDT6;B4DEW9;B3KSH1 EIF3F Eukaryotic translation initiation factor 3 subunit F yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 121.97 122.29 3 0.019274 32686 Miao_Sh-H9_Flag_mass3_141226_03 36.454 15.207 3628.6 1325.1 0 0 0 0 0 0 0 2303.6 0 0 0 1444 21 1419 13515;13516 14682 14682 1 IQDIVGILR Unmodified 1025.6233 0.62332982 455 P46087;P46087-2;P46087-4;P46087-3;F5GYR3;F5H5X6 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 1 72.191 73.469 2 0.027883 13956 Miao_Sh-c_proteinG_mass3_141226_01 64.485 38.313 7365.1 1047.2 0 0 0 1185.9 0 2072 1001 0 0 1224.4 834.55 1445 455 1420 13517;13518;13519;13520;13521;13522;13523 14683;14684 14683 2 IQDWYDK Unmodified 966.4447 0.44469675 432 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 47.127 49.696 2 0.024176 5803 Miao_Sh-c_proteinG_mass3_141226_02 89.752 46.838 18055 297.18 0 0 0 1489.6 16010 0 0 258.82 0 0 0 + 1446 432 1421 13524;13525;13526;13527 14685 14685 1 IQEIIEQLDVTTSEYEK Unmodified 2037.0154 0.015381878 354 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 87.717 82.604 2;3 4.3364E-06 17694 Miao_Sh-H9_Flag_mass3_141226_01 103.87 85.686 6134.7 0 0 0 1575.5 0 0 1125.6 0 1310.5 0 366.76 1756.3 1447 354 1422 13528;13529;13530;13531;13532 14686;14687 14686 2 IQEVADELQK Unmodified 1171.6085 0.60846762 387 P18085;C9JPM4;C9JAK5 ARF4 ADP-ribosylation factor 4 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 44.223 45.225 2 0.0082026 10299 Miao_Sh-H9_proteinG_mass3_141226_03 79.201 41.505 3932.9 0 0 0 0 0 0 0 477.55 445.52 0 279.41 2730.4 1448 387 1423 13533;13534;13535;13536 14688 14688 1 IQHQDWTGGK Unmodified 1168.5625 0.56252048 92;93 CON__ENSEMBL:ENSBTAP00000024462;CON__ENSEMBL:ENSBTAP00000024466 no no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 2 2 2 32.316 34.363 2;3 0.00066503 6242 Miao_Sh-H9_proteinG_mass3_141226_03 105.13 41.715 37321 37.726 21.221 21.221 1276.5 1094.2 8359.6 0 0 0 9141.9 5899.7 11469 + 1449 92;93 1424 13537;13538;13539;13540;13541;13542;13543;13544;13545;13546;13547;13548;13549 14689;14690;14691;14692;14693;14694;14695;14696;14697;14698;14699;14700;14701;14702;14703 14700 15 IQLINNMLDK Unmodified 1200.6536 0.65364367 63 P00558;B7Z7A9;E7ERH5 PGK1 Phosphoglycerate kinase 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 1 1 27.122 27.297 3 0.033063 2702 Miao_Sh-H9_Flag_mass3_141226_03 46.001 2.9185 4800.3 775.62 730.11 45.343 0 0 0 571.87 641.3 660 0 720.14 655.9 1450 63 1425 13550;13551;13552;13553;13554;13555;13556;13557 14704 14704 1 IQLVEEELDR Unmodified 1242.6456 0.6455814 335;342;526;226;212 P07951-2;Q5TCU3;P07951-3;P07951;CON__Q3SX28;Q5TCU8;P67936-2;K7ERG3;K7ENT6;H0YL80;K7EP68;P09493;P09493-3;H0YL52;P09493-9;P09493-4;P09493-10;H0YKX5;H0YKP3;Q6ZN40;P09493-2;H0YNC7;F5H7S3;H7BYY1;H0YK48;B7Z596;P09493-5;P09493-8;P09493-7;P09493-6;P06753-2;Q5VU59;P06753-5;P06753-3;P06753-4;P06753-6;D6R904;P67936;J3KN67;P06753 TPM2;TPM4;TPM1;TPM3 Tropomyosin beta chain;Tropomyosin alpha-4 chain;Tropomyosin alpha-1 chain;Tropomyosin alpha-3 chain no no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 2 1 1 1 1 1 2 63.296 63.622 2 2.2542E-33 16730 Miao_Sh-H9_proteinG_mass3_141226_03 180.66 127.57 147950 5678.6 8629.1 0 10786 8775.7 20166 12117 12121 13016 20833 19090 16740 + 1451 342;212;335;526;226 1426 13558;13559;13560;13561;13562;13563;13564;13565;13566;13567;13568;13569;13570;13571 14705;14706;14707;14708;14709;14710;14711;14712;14713;14714;14715;14716;14717;14718;14719;14720;14721;14722;14723;14724;14725;14726;14727;14728;14729;14730;14731;14732 14730 28 IQNAGGSVMIQR Unmodified 1272.6609 0.66085431 297;296 O75688-2;C9JIR6;O75688-4;B8ZZF0;O75688-5;P35813;P35813-2;P35813-3;E9PKB5;O75688 PPM1B;PPM1A Protein phosphatase 1B;Protein phosphatase 1A no no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 43.986 44.136 2 0.00094105 4945 Miao_Sh-H9_Flag_mass3_141226_02 85.522 53.925 2273.3 434.88 389.88 327.07 0 0 0 596.95 0 524.52 0 0 0 1452 297;296 1427 13572;13573;13574;13575;13576;13577 14733;14734;14735;14736;14737;14738 14736 6 IQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVR Unmodified 3552.8464 0.84641306 453 P43686;P43686-2 PSMC4 26S protease regulatory subunit 6B yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 122.44 122.79 3;4 1.1647E-22 30288 Miao_Sh-c_Flag_mass3_141226_02 70.264 63.899 11995 0 11995 0 0 0 0 0 0 0 0 0 0 1453 453 1428 13578;13579 14739;14740 14739 1 IQTQPGYANTLR Unmodified 1360.7099 0.709913 177 Q00325;Q00325-2;F8VVM2 SLC25A3 Phosphate carrier protein, mitochondrial yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 1 46.111 47.564 2 0.00024568 5886 Miao_Sh-H9_Flag_mass3_141226_03 120.87 42.53 14375 744.9 0 554.97 0 0 3940.3 1420.9 457.6 1765.3 0 3168.7 2322 1454 177 1429 13580;13581;13582;13583;13584;13585;13586;13587 14741;14742;14743;14744;14745;14746;14747;14748;14749;14750;14751;14752;14753 14749 13 IQVLQQQADDAEER Unmodified 1641.7958 0.79582747 335 P06753-2;Q5VU59;P06753-5;P06753-3;P06753-4;P06753-6;D6R904;Q5VU61;D6RFM2 TPM3 Tropomyosin alpha-3 chain yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 1 3 2 2 4 5 1 2 3 1 48.364 50.153 2;3 3.1383E-112 11326 Miao_Sh-H9_proteinG_mass3_141226_03 214.45 189.52 56281 903.15 736.86 0 778.06 1221.9 11221 5061.2 0 2400.5 19573 14385 0 1455 335 1430 13588;13589;13590;13591;13592;13593;13594;13595;13596;13597;13598;13599;13600;13601;13602;13603;13604;13605;13606;13607;13608;13609;13610;13611;13612;13613;13614;13615 14754;14755;14756;14757;14758;14759;14760;14761;14762;14763;14764;14765;14766;14767;14768;14769;14770;14771;14772;14773;14774;14775;14776;14777;14778;14779;14780;14781;14782;14783;14784;14785 14785 32 IQVPFPTQR Unmodified 1084.6029 0.60292873 666 Q9UKV5;H3BRK9;R4GNG2 AMFR E3 ubiquitin-protein ligase AMFR yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 61.927 61.977 2 0.041406 10346 Miao_Sh-H9_Flag_mass3_141226_03 57.859 15.983 0 0 0 0 0 0 0 0 0 0 0 0 0 1456 666 1431 13616 14786 14786 1 IQVTPPGFQLVFLPFADDK Unmodified 2131.1354 0.13537785 363 P12956;B1AHC8;B1AHC9;F5H1I8 XRCC6 X-ray repair cross-complementing protein 6 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 115.73 111.62 3 0.00051486 40204 Miao_Sh-H9_proteinG_mass3_141226_01 55.707 48.858 6086.6 0 0 0 0 0 0 2003.3 737.04 0 3346.2 0 0 1457 363 1432 13617;13618;13619 14787;14788 14788 1 IREEFPDR Unmodified 1060.5302 0.53015772 315;642 P04350;M0R042;M0QYM7;Q9BUF5;K7ESM5;K7ES63 TUBB4A;TUBB6 Tubulin beta-4A chain;Tubulin beta-6 chain no no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 39.578 38.651 3 0.02554 4174 Miao_Sh-H9_Flag_mass3_141226_01 76.679 39.13 476.8 0 0 0 0 0 0 218.79 258.01 0 0 0 0 1458 315;642 1433 13620;13621 14789;14790 14789 2 IREEYPDR Unmodified 1076.5251 0.52507234 338;530;566 P07437;Q5JP53;Q5ST81;Q3ZCM7;F5H0I4;Q5SQY0;I3L2F9;A6NNZ2;Q9H4B7;CON__ENSEMBL:ENSBTAP00000025008;P68371;Q9BVA1;Q13885 TUBB;TUBB8;TUBB1;TUBB4B;TUBB2B;TUBB2A Tubulin beta chain;Tubulin beta-8 chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-4B chain;Tubulin beta-2B chain;Tubulin beta-2A chain no no 0 0 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 2 31.296 31.288 3 0.0025465 3466 Miao_Sh-H9_Flag_mass3_141226_01 114.97 65.872 3742.6 649.11 607.72 0 0 0 0 612.99 0 672.61 1200.2 0 0 1459 338;530;566 1434 13622;13623;13624;13625;13626;13627;13628 14791;14792;14793;14794;14795;14796;14797;14798 14796 8 IRELESQISELQEDLESER Unmodified 2302.1288 0.12884851 433 P35579 MYH9 Myosin-9 yes yes 0 0 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 3 2 3 2 3 2 1 2 1 5 96.66 92.678 3 8.8158E-52 19106 Miao_Sh-c_proteinG_mass3_141226_02 172.55 143.24 95552 0 0 5277.6 15597 7038.7 21850 8707.4 0 6649 19410 10301 720.84 1460 433 1435 13629;13630;13631;13632;13633;13634;13635;13636;13637;13638;13639;13640;13641;13642;13643;13644;13645;13646;13647;13648;13649;13650;13651;13652 14799;14800;14801;14802;14803;14804;14805;14806;14807;14808;14809;14810;14811;14812;14813;14814;14815;14816;14817;14818;14819;14820;14821;14822 14804 22 IRLENEIQTYR Unmodified 1433.7627 0.76267685 104 P13645;CON__P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 0 1 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 2 1 1 2 1 5 6 5 55.919 56.473 3 5.2408E-15 7851 Miao_Sh-c_proteinG_mass3_141226_02 154.66 97.748 83088 2878.9 356.37 808.49 8142.7 6700.4 9830.3 9017 10567 12120 17341 0 5325.4 + 1461 104 1436 13653;13654;13655;13656;13657;13658;13659;13660;13661;13662;13663;13664;13665;13666;13667;13668;13669;13670;13671;13672;13673;13674;13675;13676;13677;13678;13679;13680;13681 14823;14824;14825;14826;14827;14828;14829;14830;14831;14832;14833;14834;14835;14836;14837;14838;14839;14840;14841;14842;14843;14844;14845;14846;14847 14825 25 IRYESLTDPSK Unmodified 1307.6721 0.67213051 344;341;590 P07900;P07900-2;G3V2J8;Q58FF6;Q58FF8;P08238;Q58FF7;Q5T9W8 HSP90AA1;HSP90AB4P;HSP90AB2P;HSP90AB1;HSP90AB3P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-beta 4;Putative heat shock protein HSP 90-beta 2;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 no no 0 0 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 2 1 1 43.413 44.984 3 6.7638E-07 9592 Miao_Sh-c_proteinG_mass3_141226_03 129.74 84.089 21842 694.43 0 662.69 320.7 473.35 0 0 0 1523.9 7029.5 5521.2 5616 1462 341;590;344 1437 13682;13683;13684;13685;13686;13687;13688;13689;13690;13691;13692;13693 14848;14849;14850;14851;14852;14853;14854;14855;14856 14851 9 ISDSVLVDIK Unmodified 1087.6125 0.61249036 66 P48643;E7ENZ3;B7ZAR1;E9PCA1;P48643-2 CCT5 T-complex protein 1 subunit epsilon yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching 1 1 1 2 1 1 1 1 62.514 64.093 2 0.0036001 11637 Miao_Sh-H9_Flag_mass3_141226_01 90.913 50.846 24135 1708.4 1393.7 0 1069.6 0 864.12 3727.7 0 0 6246.9 4329.1 4795.2 1463 66 1438 13694;13695;13696;13697;13698;13699;13700;13701;13702 14857;14858;14859 14859 3 ISEIEDAAFLAR Unmodified 1333.6878 0.68778057 121;292 O94905;E5RHW4;O75477;B0QZ43 ERLIN2;ERLIN1 Erlin-2;Erlin-1 no no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 3 1 1 1 1 2 1 73.378 71.523 2 1.0921E-25 13884 Miao_Sh-H9_Flag_mass3_141226_01 162.23 103.48 13554 0 494 5394.3 468 0 351 0 6002.1 0 845.01 0 0 1464 121;292 1439 13703;13704;13705;13706;13707;13708;13709;13710;13711;13712 14860;14861;14862;14863;14864;14865;14866 14864 7 ISEQFTAMFR Unmodified 1228.591 0.59104341 338;530;566;315;564 P07437;Q5JP53;Q5ST81;E9PBJ4;P68371;Q9BVA1;Q13885;P04350;Q13509;Q13509-2 TUBB;TUBB4B;TUBB2B;TUBB2A;TUBB4A;TUBB3 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-4A chain;Tubulin beta-3 chain no no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 2 74.829 76.255 2 0.0093201 13981 Miao_Sh-c_Flag_mass3_141226_02 77.597 47.83 14387 0 3912 0 0 4122.3 0 0 0 6353.3 0 0 0 1465 338;530;566;315;564 1440 13713;13714;13715;13716;13717 14867;14868;14869 14867 3 ISEQFTAMFR Oxidation (M) 1244.586 0.58595803 338;530;566;315;564 P07437;Q5JP53;Q5ST81;E9PBJ4;P68371;Q9BVA1;Q13885;P04350;Q13509;Q13509-2 TUBB;TUBB4B;TUBB2B;TUBB2A;TUBB4A;TUBB3 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-4A chain;Tubulin beta-3 chain no no 0 0 1 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 68.696 66.159 2 0.055161 9124 Miao_Sh-c_Flag_mass3_141226_03 50.108 33.578 6354 0 0 780.12 0 0 1142.7 0 445.78 3233.1 752.26 0 0 1466 338;530;566;315;564 1440 13718;13719;13720;13721;13722 14870 14870 1 ISFPAIQAAPSFSNSFPQIFR Unmodified 2324.1954 0.19535235 401 P23381;P23381-2;H0YJP3 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 105.47 108.32 3 3.3685E-12 27081 Miao_Sh-c_proteinG_mass3_141226_02 84.166 71.786 0 0 0 0 0 0 0 0 0 0 0 0 0 1467 401 1441 13723;13724 14871;14872 14872 2 ISGETIFVTAPHEATAGIIGVNR Unmodified 2352.2438 0.24375911 535 Q00610;Q00610-2 CLTC Clathrin heavy chain 1 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 2 1 79.51 80.174 3 2.4309E-26 17093 Miao_Sh-H9_Flag_mass3_141226_03 100.85 86.58 0 0 0 0 0 0 0 0 0 0 0 0 0 1468 535 1442 13725;13726;13727;13728 14873;14874;14875;14876 14876 4 ISGLIYEETR Unmodified 1179.6136 0.61355299 513 P62805 HIST1H4A Histone H4 yes yes 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 1 1 1 2 3 5 55.944 57.863 2 1.5625E-26 8629 Miao_Sh-H9_Flag_mass3_141226_01 140.48 67.694 54233 0 0 0 7138.8 5843.6 18709 6917.7 7233.6 6163.8 0 0 2226.6 1469 513 1443 13729;13730;13731;13732;13733;13734;13735;13736;13737;13738;13739;13740;13741;13742;13743;13744;13745;13746 14877;14878;14879;14880;14881;14882;14883;14884;14885;14886;14887;14888;14889;14890;14891;14892;14893;14894 14883 17 ISGSILNELIGLVR Unmodified 1482.877 0.87697832 606 Q86VP6;Q86VP6-2 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 112.03 114.31 2 3.0891E-09 26462 Miao_Sh-c_Flag_mass3_141226_01 94.09 76.424 1543.3 584.12 0 0 0 959.14 0 0 0 0 0 0 0 1470 606 1444 13747;13748 14895 14895 0 ISIGGGSCAISGGYGSR Unmodified 1597.7519 0.75185416 98 P02538;CON__P02538;P48668;CON__P04259;CON__P48668 KRT6A;KRT6C Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C no no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 2 1 1 1 2 2 1 53.679 55.781 2;3 8.6727E-83 14696 Miao_Sh-H9_proteinG_mass3_141226_02 201.04 161.46 68959 0 0 0 3063.2 2736.8 11769 282.97 1001.5 1416.8 16251 21395 11042 + 1471 98 1445 13749;13750;13751;13752;13753;13754;13755;13756;13757;13758;13759;13760 14896;14897;14898;14899;14900;14901;14902;14903;14904;14905;14906;14907;14908;14909;14910;14911;14912 14908 17 ISISTSGGSFR Unmodified 1110.5669 0.56693715 105 P13647;CON__P13647;F8VV57 KRT5 Keratin, type II cytoskeletal 5 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 52.04 53.978 2 5.0168E-08 12744 Miao_Sh-H9_proteinG_mass3_141226_03 140.48 92.447 43941 906.99 371.93 713.48 0 0 10424 0 0 0 11655 10310 9558.8 + 1472 105 1446 13761;13762;13763;13764;13765;13766;13767 14913;14914;14915;14916;14917;14918;14919 14918 7 ISKGEYGNAGIMAEVEELRK Oxidation (M) 2209.1049 0.10488236 86 Q4L180;C9JYJ6;Q4L180-3;Q4L180-7;Q4L180-2 FILIP1L Filamin A-interacting protein 1-like yes no 0 0 1 0 2 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 97.766 89.496 3 0.010073 30722 Miao_Sh-H9_proteinG_mass3_141226_02 46.494 20.202 139350 0 0 370.34 0 0 0 0 0 0 0 137190 1790.3 1473 86 1447 13768;13769;13770 14920 14920 10 1 ISLAPTDVK Unmodified 942.5386 0.53859714 619 Q8WWM7;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7-3;H3BUF6 ATXN2L Ataxin-2-like protein yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 48.986 50.039 2 0.04408 12228 Miao_Sh-H9_proteinG_mass3_141226_01 60.398 28.043 5068.3 0 0 313.71 0 317.6 0 0 361.67 650.72 3424.6 0 0 1474 619 1448 13771;13772;13773;13774;13775 14921 14921 1 ISLPLPNFSSLNLR Unmodified 1569.8879 0.88787736 346 P08670;B0YJC4 VIM Vimentin yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 3 4 1 4 1 2 4 1 2 1 3 2 105.57 100.89 2;3 1.5337E-09 24476 Miao_Sh-c_proteinG_mass3_141226_01 131.66 63.128 56894 5476.1 6293 0 0 9134.1 1332.1 2453.7 1494.2 3232.5 3512.2 11688 12278 1475 346 1449 13776;13777;13778;13779;13780;13781;13782;13783;13784;13785;13786;13787;13788;13789;13790;13791;13792;13793;13794;13795;13796;13797;13798;13799;13800;13801;13802;13803 14922;14923;14924;14925;14926;14927;14928;14929;14930;14931;14932;14933;14934;14935;14936;14937;14938;14939;14940;14941;14942;14943;14944;14945;14946;14947;14948;14949;14950;14951;14952;14953;14954 14930 33 ISLTQAGLEALFESNLLDDLK Unmodified 2289.2104 0.21039329 586 Q16401 PSMD5 26S proteasome non-ATPase regulatory subunit 5 yes yes 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 116.71 117.33 3 1.7608E-15 30475 Miao_Sh-H9_Flag_mass3_141226_03 90.397 76.045 0 0 0 0 0 0 0 0 0 0 0 0 0 1476 586 1450 13804;13805;13806 14955;14956;14957 14957 3 ISPLQFR Unmodified 859.49159 0.49158736 478 P53621;P53621-2 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 57.704 60.444 2 0.014772 15256 Miao_Sh-H9_proteinG_mass3_141226_03 100.07 46.512 2939.2 0 0 0 0 0 1342.2 0 0 468.29 0 1128.7 0 1477 478 1451 13807;13808;13809;13810;13811 14958;14959;14960 14960 3 ISSIQSIVPALEIANAHR Unmodified 1918.0636 0.063609895 354 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 3 1 1 1 1 2 1 96.38 89.769 3 5.3978E-15 16793 Miao_Sh-c_Flag_mass3_141226_01 112.67 83.2 26353 0 0 3482.7 3226 0 203.5 3866 2306.6 0 3653.9 6322.3 3292.1 1478 354 1452 13812;13813;13814;13815;13816;13817;13818;13819;13820;13821;13822;13823;13824;13825 14961;14962;14963;14964;14965;14966;14967;14968;14969;14970;14971;14972 14962 12 ISSLLEEQFQQGK Unmodified 1505.7726 0.77257283 499 P62241;Q5JR95 RPS8 40S ribosomal protein S8 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 2 2 3 4 1 1 3 4 3 63.305 65.684 2;3 8.9156E-125 18300 Miao_Sh-H9_proteinG_mass3_141226_02 232.83 175.57 104770 3630.5 3369.5 2676.7 4977.4 6347.5 20593 0 6299.9 0 15067 25103 16702 1479 499 1453 13826;13827;13828;13829;13830;13831;13832;13833;13834;13835;13836;13837;13838;13839;13840;13841;13842;13843;13844;13845;13846;13847;13848;13849;13850 14973;14974;14975;14976;14977;14978;14979;14980;14981;14982;14983;14984;14985;14986;14987;14988;14989;14990;14991;14992;14993;14994;14995;14996;14997;14998;14999;15000;15001 14996 29 ISSVLAGGSCR Unmodified 1105.555 0.55499226 97;102 P02533;CON__P02533;K7ENV3;P08779;CON__P08779 KRT14;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 37.696 39.862 2 0.0014943 9425 Miao_Sh-H9_proteinG_mass3_141226_01 99.539 67.218 11046 0 1980.6 0 93.418 0 1850.4 0 0 0 6749.5 372.51 0 + 1480 97;102 1454 13851;13852;13853;13854;13855 15002 15002 1 ISVYYNEATGGK Unmodified 1300.6299 0.62993134 338 P07437;Q5JP53;E9PBJ4 TUBB Tubulin beta chain yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 1 1 2 2 2 1 1 1 48.515 50.506 2 1.0861E-17 6857 Miao_Sh-H9_Flag_mass3_141226_02 150.51 111.94 97223 4562 0 4025.9 0 0 16884 0 0 9248.2 19171 29338 13994 1481 338 1455 13856;13857;13858;13859;13860;13861;13862;13863;13864;13865;13866;13867;13868;13869 15003;15004;15005;15006;15007;15008;15009;15010;15011;15012;15013;15014;15015;15016;15017;15018;15019 15013 17 ISYSGQFLVK Unmodified 1140.6179 0.61791009 659 Q9NZI8;Q9NZI8-2 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 1 2 1 1 2 2 64.817 64.558 2 0.023917 16360 Miao_Sh-c_proteinG_mass3_141226_03 63.073 29.696 21696 851.57 0 0 2058.3 1990.4 4575.5 3473.5 957.3 0 4984.8 2804.6 0 1482 659 1456 13870;13871;13872;13873;13874;13875;13876;13877;13878;13879;13880 15020;15021;15022;15023 15022 4 ITDVIIGFQACCR Unmodified 1551.7538 0.75376842 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 2 1 2 1 1 1 2 2 84.631 79.335 2;3 5.8403E-05 29020 Miao_Sh-H9_proteinG_mass3_141226_03 108.56 90.491 9010.5 1574.7 0 0 582.62 0 2438.8 0 1524.6 1780.8 482.55 626.49 0 1483 433 1457 13881;13882;13883;13884;13885;13886;13887;13888;13889;13890;13891;13892 15024;15025;15026;15027;15028 15027 5 ITFDAFPGEPDK Unmodified 1335.6347 0.63468237 551 Q12904;Q12904-2 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 2 1 1 69.285 70.003 2 0.0018509 13416 Miao_Sh-H9_Flag_mass3_141226_03 74.987 46.704 3359.9 0 0 0 0 0 0 0 973.71 877.51 0 1508.7 0 1484 551 1458 13893;13894;13895;13896;13897;13898 15029;15030;15031;15032 15030 4 ITGEAFVQFASQELAEK Unmodified 1866.9363 0.9363437 472 P52597 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 4 2 1 1 3 106.25 97.99 2;3 1.0936E-05 22165 Miao_Sh-H9_Flag_mass3_141226_01 76.586 58.396 27822 0 1930.7 0 0 0 0 6187.5 2272.1 0 3520 606.79 13305 1485 472 1459 13899;13900;13901;13902;13903;13904;13905;13906;13907;13908;13909;13910;13911 15033;15034;15035;15036;15037;15038;15039;15040;15041;15042;15043;15044;15045;15046 15037 13 ITISSLQDLTLYNPER Unmodified 1861.9785 0.97854286 659 Q9NZI8;Q9NZI8-2 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 99.856 93.54 2;3 1.4905E-05 33907 Miao_Sh-H9_proteinG_mass3_141226_01 107.73 87.685 2817.4 0 0 0 0 0 0 0 0 860.23 1957.2 0 0 1486 659 1460 13912;13913;13914 15047;15048;15049 15048 3 ITITNDK Unmodified 803.43888 0.43888309 356;343;382 P08107;P08107-2;E7EP94;V9GZ37;P11142;E9PKE3;E9PNE6;A8K7Q2;P54652;E9PS65;E9PM13;P17066 HSPA1A;HSPA8;HSPA2;HSPA6 Heat shock 70 kDa protein 1A/1B;Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 6 no no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 1 32.466 32.328 2 0.022637 3388 Miao_Sh-c_Flag_mass3_141226_01 91.9 29.183 1443.4 445.19 0 421.1 0 0 0 246.22 330.94 0 0 0 0 1487 343;356;382 1461 13915;13916;13917;13918;13919 15050;15051;15052;15053 15050 4 ITITNDQNR Unmodified 1073.5465 0.54653606 355 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 1 2 1 1 1 1 2 1 33.308 34.538 2 1.4975E-64 3141 Miao_Sh-c_Flag_mass3_141226_03 215.38 145.38 12286 1562.2 1499.4 1541.3 0 290.13 1520.9 1759.3 1518.2 0 1427.5 1167.3 0 1488 355 1462 13920;13921;13922;13923;13924;13925;13926;13927;13928;13929;13930 15054;15055;15056;15057;15058;15059;15060;15061;15062;15063;15064;15065;15066 15057 13 ITLPVDFVTADK Unmodified 1317.718 0.71801807 63 P00558;B7Z7A9;E7ERH5 PGK1 Phosphoglycerate kinase 1 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 3 2 2 1 1 2 2 3 2 83.657 82.521 2 0.0010051 17332 Miao_Sh-c_proteinG_mass3_141226_02 83.204 39.896 22304 4596.3 0 287.65 249.7 0 0 6070.4 10778 0 0 321.92 0 1489 63 1463 13931;13932;13933;13934;13935;13936;13937;13938;13939;13940;13941;13942;13943;13944;13945;13946;13947;13948;13949;13950 15067;15068;15069;15070;15071;15072;15073;15074;15075;15076;15077;15078;15079;15080;15081;15082;15083;15084;15085 15073 19 ITPAHDQNDYEVGQR Unmodified 1741.802 0.80197548 416 P26640 VARS Valine--tRNA ligase yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 35.378 37.834 3 0.0022017 7568 Miao_Sh-H9_proteinG_mass3_141226_03 60.55 45.163 0 0 0 0 0 0 0 0 0 0 0 0 0 1490 416 1464 13951 15086 15086 1 ITPSYVAFTPEGER Unmodified 1565.7726 0.77257283 355 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 2 1 2 2 2 3 4 3 3 65.143 65.958 2;3 8.0399E-58 11520 Miao_Sh-c_proteinG_mass3_141226_02 195.71 151.15 395910 36489 34905 33604 20176 10992 23778 47063 61289 57071 33080 29425 8037.6 1491 355 1465 13952;13953;13954;13955;13956;13957;13958;13959;13960;13961;13962;13963;13964;13965;13966;13967;13968;13969;13970;13971;13972;13973;13974;13975;13976;13977;13978;13979;13980 15087;15088;15089;15090;15091;15092;15093;15094;15095;15096;15097;15098;15099;15100;15101;15102;15103;15104;15105;15106;15107;15108;15109;15110;15111;15112;15113;15114;15115;15116;15117;15118;15119;15120;15121;15122;15123;15124;15125;15126;15127;15128;15129;15130;15131;15132;15133;15134;15135;15136;15137;15138;15139;15140;15141;15142;15143;15144 15112 58 ITSGPFEPDLYK Unmodified 1365.6816 0.68163256 669 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 yes yes 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 2 1 1 2 1 1 1 66.052 67.727 2 0.00016055 17429 Miao_Sh-c_proteinG_mass3_141226_03 124.21 82.502 32700 1270.1 1125.8 301.6 0 2729.8 5164.1 2026.7 0 5228.6 4631.2 6410.8 3811.3 1492 669 1466 13981;13982;13983;13984;13985;13986;13987;13988;13989;13990;13991;13992;13993 15145;15146;15147;15148;15149;15150;15151;15152;15153;15154 15147 10 ITVLQLSALLK Unmodified 1197.7697 0.76965971 594 Q5T4S7;Q5T4S7-3;Q5T4S7-4;Q5T4S7-2;Q5T4S7-5 UBR4 E3 ubiquitin-protein ligase UBR4 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 101.88 98.717 2 0.0028228 22812 Miao_Sh-H9_Flag_mass3_141226_01 87.216 48.798 2647.8 0 0 0 0 310.24 809.02 0 0 1528.5 0 0 0 1493 594 1467 13994;13995;13996;13997;13998 15155;15156;15157 15155 3 ITVTSEVPFSK Unmodified 1206.6496 0.64960415 250 P35268;K7ERI7;K7EJT5;K7EP65;K7EKS7;K7ELC4;K7EMH1 RPL22 60S ribosomal protein L22 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 1 1 1 59.365 61.17 2 3.2706E-22 16150 Miao_Sh-H9_proteinG_mass3_141226_02 167.2 122.45 92577 8513.4 0 3332.7 0 0 18251 8127.3 0 0 23451 13993 16909 1494 250 1468 13999;14000;14001;14002;14003;14004;14005;14006;14007;14008 15158;15159;15160;15161;15162;15163;15164;15165;15166;15167;15168;15169;15170;15171;15172;15173 15170 16 IVAEEFLK Unmodified 947.53278 0.53278348 185 P59998;F8WCF6;P59998-3;H7C0A3;R4GN08;P59998-4 ARPC4;ARPC4-TTLL3 Actin-related protein 2/3 complex subunit 4 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 57.245 63.11 2 0.050329 15813 Miao_Sh-c_proteinG_mass3_141226_03 65.156 37.67 2938.3 0 0 0 0 0 2938.3 0 0 0 0 0 0 1495 185 1469 14009 15174 15174 1 IVALNAHTFLR Unmodified 1253.7244 0.72444085 394;4 A6NHQ2;R4GMW7;P22087;M0R0P1;M0R299;M0QXL5;M0R2Q4 FBLL1;FBL rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1;rRNA 2'-O-methyltransferase fibrillarin no no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 2 84.911 79.907 3 0.00044982 31528 Miao_Sh-H9_proteinG_mass3_141226_01 100.69 73.798 9810.9 1230.6 1061.8 0 0 0 0 0 0 2046.1 2357.5 3114.8 0 1496 4;394 1470 14010;14011;14012;14013;14014;14015 15175;15176;15177 15176 3 IVEPYIAWGYPNLK Unmodified 1661.8817 0.88172935 388 P18124;A8MUD9 RPL7 60S ribosomal protein L7 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 2 1 1 2 2 1 92.264 90.253 2;3 0.00022927 17852 Miao_Sh-c_Flag_mass3_141226_03 77.185 33.423 17166 0 2410 2633.3 0 860.39 1103.9 5925.9 3509.6 0 0 723.29 0 1497 388 1471 14016;14017;14018;14019;14020;14021;14022;14023;14024;14025 15178;15179;15180 15178 3 IVFQEFR Unmodified 937.50215 0.50215205 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 no no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 2 4 2 66.927 65.793 2 0.0034719 15811 Miao_Sh-c_proteinG_mass3_141226_03 124.37 70.169 41177 1999.2 1575.7 1545 5497.2 4726.2 4930.2 0 3786.2 0 6280.1 3505.2 7332.2 1498 434 1472 14026;14027;14028;14029;14030;14031;14032;14033;14034;14035;14036;14037;14038;14039;14040;14041 15181;15182;15183;15184;15185;15186;15187;15188;15189;15190;15191;15192;15193;15194;15195;15196;15197;15198;15199 15185 19 IVIGYQSHADTATK Unmodified 1502.7729 0.77290718 118 P06730;D6RBW1;P06730-3;P06730-2 EIF4E Eukaryotic translation initiation factor 4E yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 1 42.108 43.437 3 0.0034306 10045 Miao_Sh-H9_proteinG_mass3_141226_01 58.32 27.431 6158.6 354.4 262.31 200.12 0 0 0 0 0 0 1834.3 1782.8 1724.6 1499 118 1473 14042;14043;14044;14045;14046;14047 15200 15200 1 IVLDNSVFSEHR Unmodified 1414.7205 0.72047768 535 Q00610;Q00610-2;P53675;J3KR87;P53675-2 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain 2 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 1 1 1 59.828 61.156 3 2.189E-27 8586 Miao_Sh-c_Flag_mass3_141226_03 127.56 87.934 21219 0 3924.3 4267.6 3452.2 0 753.56 140.72 3514.9 0 4651.5 0 514.21 1500 535 1474 14048;14049;14050;14051;14052;14053;14054;14055 15201;15202;15203 15202 0 IVLLDSSLEYK Unmodified 1278.7071 0.70711903 43 P49368;B4DUR8;P49368-2;Q5SZX6 CCT3 T-complex protein 1 subunit gamma yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 2 3 3 1 1 2 1 2 78.364 75.259 2 0.0010464 14530 Miao_Sh-H9_Flag_mass3_141226_01 101.39 52.413 25473 0 3683.7 3641 2488.5 0 0 6666.6 3679.5 3621.9 948.62 238.69 504.56 1501 43 1475 14056;14057;14058;14059;14060;14061;14062;14063;14064;14065;14066;14067;14068;14069;14070;14071;14072 15204;15205;15206;15207;15208;15209;15210;15211;15212;15213;15214;15215;15216 15210 12 IVLQIDNAR Unmodified 1040.5978 0.59784335 178 P05783;F8VZY9 KRT18 Keratin, type I cytoskeletal 18 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 53.02 54.825 2 0.0021372 14271 Miao_Sh-H9_proteinG_mass3_141226_01 113.1 35.813 9920.9 0 0 0 0 0 0 0 0 0 5670.8 0 4250.2 1502 178 1476 14073;14074 15217 15217 1 IVSQLLTLMDGLK Unmodified 1429.8214 0.82143728 483 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 103.36 103.46 2 0.00026576 24049 Miao_Sh-H9_Flag_mass3_141226_01 94.487 64.019 14451 0 3070.4 3513.7 0 0 0 4454.3 3412.2 0 0 0 0 1503 483 1477 14075;14076;14077;14078 15218;15219;15220 15219 2 IVSRPEELR Unmodified 1097.6193 0.61930707 43 P49368;B4DUR8;P49368-2 CCT3 T-complex protein 1 subunit gamma yes no 0 0 0 0 1 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 36.805 37.256 3 0.01583 3517 Miao_Sh-c_Flag_mass3_141226_02 70.028 30.724 0 0 0 0 0 0 0 0 0 0 0 0 0 1504 43 1478 14079 15221 15221 1 IVSRPEELREDDVGTGAGLLEIK Unmodified 2495.3231 0.32313164 43 P49368;B4DUR8;P49368-2 CCT3 T-complex protein 1 subunit gamma yes no 0 0 0 0 2 By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 80.757 76.998 4 0.00058136 32779 Miao_Sh-H9_proteinG_mass3_141226_01 44.683 34.536 14719 0 0 0 4055.7 0 0 7001 0 0 3662.4 0 0 1505 43 1479 14080;14081;14082 15222;15223;15224 15224 2 IVVNLTGR Unmodified 870.5287 0.52870115 217 P62244;I3L3P7;I3L246;H3BN98 RPS15A 40S ribosomal protein S15a yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 1 1 1 2 49.811 52.192 2 4.3328E-27 13165 Miao_Sh-H9_proteinG_mass3_141226_01 187.8 96.707 63188 1446.1 0 869.98 1260.7 1350.4 13578 0 0 331.03 18108 13050 13194 1506 217 1480 14083;14084;14085;14086;14087;14088;14089;14090;14091;14092;14093;14094 15225;15226;15227;15228;15229;15230;15231;15232 15228 8 IVVVTAGVR Unmodified 912.57565 0.57565135 336 P07195;A8MW50;C9J7H8;F5H793 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 2 1 1 1 1 1 1 1 46.806 48.109 2 9.5803E-16 5326 Miao_Sh-c_Flag_mass3_141226_01 169.09 113.19 24607 1234.6 0 0 74.736 0 5809.7 1913.5 2247.8 2180.7 6341.8 0 4804.3 1507 336 1481 14095;14096;14097;14098;14099;14100;14101;14102;14103;14104 15233;15234;15235;15236;15237;15238;15239;15240;15241;15242;15243;15244;15245;15246;15247 15233 15 IVYLYTK Unmodified 898.51641 0.51640513 463 P49207 RPL34 60S ribosomal protein L34 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 2 1 1 4 1 2 1 3 2 3 56.601 56.02 2 0.0022823 11648 Miao_Sh-c_proteinG_mass3_141226_03 134.85 29.634 191520 5308.5 6489 5948.8 6415.2 6417.2 34486 12311 12157 11296 39803 26194 24700 1508 463 1482 14105;14106;14107;14108;14109;14110;14111;14112;14113;14114;14115;14116;14117;14118;14119;14120;14121;14122;14123;14124;14125;14126 15248;15249;15250;15251;15252;15253;15254;15255;15256;15257;15258;15259;15260;15261;15262;15263;15264;15265;15266;15267;15268;15269;15270;15271;15272;15273;15274;15275 15254 28 IWGLGFLPQVSTDLTPQTFSEK Unmodified 2463.2686 0.26857687 609 Q8IXB1;Q8IXB1-2 DNAJC10 DnaJ homolog subfamily C member 10 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching 1 1 3 1 1 1 114.58 109.65 3 6.2217E-21 28068 Miao_Sh-c_proteinG_mass3_141226_02 98.562 89.53 18748 465.11 0 0 8479.7 0 1366.5 982.88 0 0 7453.9 0 0 1509 609 1483 14127;14128;14129;14130;14131;14132;14133;14134 15276;15277;15278;15279;15280;15281;15282 15279 7 IWHHTFYNELR Unmodified 1514.7419 0.74188183 524;528 P63261;P60709;I3L3I0;I3L1U9;I3L4N8;Q6S8J3;A5A3E0;K7EM38;I3L3R2;J3KT65;P0CG38;G5E9R0;E7EVS6;C9JUM1;C9JZR7;P0CG39;Q9BYX7;P68133;P68032;Q5T8M8;A6NL76 ACTG1;ACTB;POTEE;POTEF;POTEI;POTEJ;POTEKP;ACTA1;ACTC1 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Putative beta-actin-like protein 3;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1 no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 7 6 3 3 3 2 4 3 5 7 1 66.437 64.654 2;3;4 2.9765E-91 7336 Miao_Sh-c_proteinG_mass3_141226_02 218.43 178.85 484610 35497 30756 29164 48046 48531 14705 51279 51753 54444 45182 55213 20044 1510 524;528 1484 14135;14136;14137;14138;14139;14140;14141;14142;14143;14144;14145;14146;14147;14148;14149;14150;14151;14152;14153;14154;14155;14156;14157;14158;14159;14160;14161;14162;14163;14164;14165;14166;14167;14168;14169;14170;14171;14172;14173;14174;14175;14176;14177;14178;14179;14180;14181 15283;15284;15285;15286;15287;15288;15289;15290;15291;15292;15293;15294;15295;15296;15297;15298;15299;15300;15301;15302;15303;15304;15305;15306;15307;15308;15309;15310;15311;15312;15313;15314;15315;15316;15317;15318;15319;15320;15321;15322;15323;15324;15325;15326;15327;15328;15329;15330;15331;15332;15333;15334;15335;15336;15337;15338;15339;15340;15341;15342;15343;15344;15345;15346;15347;15348;15349;15350;15351;15352;15353;15354;15355;15356;15357;15358;15359;15360;15361;15362;15363;15364;15365;15366;15367;15368;15369;15370;15371;15372 15314 90 IYGISFPDPK Unmodified 1135.5914 0.59136099 130 P26639;E7ERI3;G3XAN9;P26639-2 TARS Threonine--tRNA ligase, cytoplasmic yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 74.886 75.237 2 0.036739 13779 Miao_Sh-c_Flag_mass3_141226_02 55.353 32.281 0 0 0 0 0 0 0 0 0 0 0 0 0 1511 130 1485 14182 15373 15373 1 IYGLGSLALYEK Unmodified 1325.7231 0.72310344 33 P36542;B4DL14;P36542-2 ATP5C1 ATP synthase subunit gamma, mitochondrial;ATP synthase subunit gamma yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching 1 1 2 2 79.485 81.67 2 0.0020747 17350 Miao_Sh-H9_Flag_mass3_141226_01 74.392 44.726 7336.5 0 0 1670.4 2437.5 2872.3 0 356.2 0 0 0 0 0 1512 33 1486 14183;14184;14185;14186;14187;14188 15374;15375;15376 15376 3 IYIDSNNNPER Unmodified 1333.6262 0.62624295 535 Q00610;Q00610-2 CLTC Clathrin heavy chain 1 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 2 1 2 1 43.258 44.293 2 0.0011686 4422 Miao_Sh-c_Flag_mass3_141226_01 114.86 72.145 2687.9 308.34 68.9 317.2 100.1 162.34 0 72.277 85.801 0 0 1573 0 1513 535 1487 14189;14190;14191;14192;14193;14194;14195;14196;14197;14198;14199 15377;15378;15379;15380;15381;15382;15383 15377 7 IYLYLTK Unmodified 912.53206 0.5320552 447 P41250 GARS Glycine--tRNA ligase yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 65.871 64.768 2 0.045176 11543 Miao_Sh-H9_Flag_mass3_141226_02 67.981 7.2209 0 0 0 0 0 0 0 0 0 0 0 0 0 1514 447 1488 14200 15384 15384 1 IYSYVVSRPQPR Unmodified 1463.7885 0.78849767 630 Q96CS3 FAF2 FAS-associated factor 2 yes yes 0 0 0 0 1 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 1 47.767 47.867 3 0.0063374 5774 Miao_Sh-H9_Flag_mass3_141226_01 64.103 40.784 5942.3 788.72 858.38 917.53 0 0 0 0 1672.8 1704.8 0 0 0 1515 630 1489 14201;14202;14203;14204;14205;14206 15385;15386;15387;15388 15388 4 IYVDDGLISLQVK Unmodified 1461.8079 0.80789571 368 P14618;P14618-2;P14618-3;H3BTN5;H3BQ34 PKM Pyruvate kinase PKM;Pyruvate kinase yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 1 1 1 2 3 2 2 2 5 4 5 87.513 83.801 2;3 1.4133E-24 17819 Miao_Sh-H9_Flag_mass3_141226_03 161.87 119.45 73664 1732.9 0 809.82 2678.5 6553.2 0 20665 14070 12774 7502.4 1028.1 5850.3 1516 368 1490 14207;14208;14209;14210;14211;14212;14213;14214;14215;14216;14217;14218;14219;14220;14221;14222;14223;14224;14225;14226;14227;14228;14229;14230;14231;14232;14233;14234;14235;14236;14237 15389;15390;15391;15392;15393;15394;15395;15396;15397;15398;15399;15400;15401;15402;15403;15404;15405;15406;15407;15408;15409;15410;15411;15412;15413;15414;15415;15416;15417;15418;15419;15420 15404 32 IYVISLAEPR Unmodified 1159.6601 0.66010926 372 P14868;Q68CR9;C9J7S3;C9JLC1;C9JQM9 DARS Aspartate--tRNA ligase, cytoplasmic yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching 1 1 72.145 71.768 2 0.0047257 13957 Miao_Sh-H9_Flag_mass3_141226_02 85.355 59.796 0 0 0 0 0 0 0 0 0 0 0 0 0 1517 372 1491 14238;14239 15421;15422 15421 2 KAADGAAEPGVVGQMIEAAEER Unmodified 2198.0637 0.063745829 29 P27824;B4DGP8;B4E2T8 CANX Calnexin yes no 0 0 0 0 1 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 1 2 2 66.144 63.027 4 0.057351 5510 Miao_Sh-c_proteinG_mass3_141226_01 13.367 2.2519 110200 967.52 0 1288.4 18082 14535 0 1493 2165.7 0 31874 24734 15063 1518 29 1492 14240;14241;14242;14243;14244;14245;14246;14247;14248;14249;14250 15423;15424 15423 2 KAEAGAGSATEFQFR Unmodified 1568.7583 0.75831975 460 P46783;Q9NQ39 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 50.181 51.351 3 0.0041959 12435 Miao_Sh-H9_proteinG_mass3_141226_02 75.01 58.347 9600 0 0 0 0 0 0 0 0 1539 4585.9 3475.2 0 1519 460 1493 14251;14252;14253 15425;15426;15427 15427 3 KASGPPVSELITK Unmodified 1325.7555 0.7554662 378;352;379 P16402;P10412;P16403 HIST1H1D;HIST1H1E;HIST1H1C Histone H1.3;Histone H1.4;Histone H1.2 no no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 44.132 50.398 3 0.034339 10867 Miao_Sh-c_proteinG_mass3_141226_03 72.681 60.05 2425.4 0 0 0 0 0 2425.4 0 0 0 0 0 0 1520 378;352;379 1494 14254 15428;15429 15428 2 KATGPPVSELITK Unmodified 1339.7711 0.77111627 377 P16401 HIST1H1B Histone H1.5 yes yes 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 50.348 52.328 3 0.0040472 12594 Miao_Sh-H9_proteinG_mass3_141226_02 92.939 71.88 2406 0 0 0 268.78 0 0 0 0 0 0 2137.2 0 1521 377 1495 14255;14256 15430 15430 1 KDEQSPELR QQTGG (K) 1571.754 0.75396265 407 P25189-2 yes yes 0 0 0 1 1 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching 1 1 2 2 1 1 1 60.259 60.51 4 0.012929 38468 Miao_Sh-H9_proteinG_mass3_141226_02 64.82 7.2882 22517 1285.5 1187.2 0 5424.2 4888.2 0 1459.3 0 2662.2 0 5610.4 0 1522 407 1496 14257;14258;14259;14260;14261;14262;14263;14264;14265 15431;15432;15433;15434 15434 2 4 KDLYANNVMSGGTTMYPGIADR Unmodified 2373.1093 0.10931581 528 P68133;Q5T8M8;A6NL76;Q5T8M7 ACTA1 Actin, alpha skeletal muscle yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 37.068 39.775 6 0.051473 4234 Miao_Sh-H9_Flag_mass3_141226_03 15.089 1.9353 317.98 0 0 0 0 0 213.15 0 0 104.83 0 0 0 1523 528 1497 14266;14267 15435 15435 0 KEDLVFIFWAPESAPLK Unmodified 1989.0612 0.061150279 404 P23528;G3V1A4;E9PP50;E9PK25;E9PQB7;Q9Y281;Q9Y281-3 CFL1;CFL2 Cofilin-1;Cofilin-2 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 119.27 107.09 3 0.044611 38923 Miao_Sh-H9_proteinG_mass3_141226_01 56.719 48.805 6934.4 0 0 0 0 0 0 0 0 0 6934.4 0 0 1524 404 1498 14268 15436 15436 1 KEEELQAALAR Unmodified 1256.6725 0.67246486 433;158 P35579;Q7Z406;F2Z2U8;G8JLL9;Q7Z406-6;Q7Z406-2;Q7Z406-5;Q7Z406-4 MYH9;MYH14 Myosin-9;Myosin-14 no no 0 0 0 0 1 By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 2 4 1 50.967 50.432 2;3 2.3208E-29 10313 Miao_Sh-H9_proteinG_mass3_141226_03 175.33 128.99 45947 603.01 0 614.16 965.46 748.43 0 2032.9 1044.9 1019.9 16638 17568 4711.7 1525 433;158 1499 14269;14270;14271;14272;14273;14274;14275;14276;14277;14278;14279;14280;14281;14282;14283 15437;15438;15439;15440;15441;15442;15443;15444;15445;15446;15447;15448;15449;15450;15451;15452;15453;15454;15455;15456;15457 15455 19 KEEELQGALAR Unmodified 1242.6568 0.65681479 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 38.262 40.317 3 6.5695E-06 8774 Miao_Sh-H9_proteinG_mass3_141226_02 139.78 97.427 21958 0 0 0 254.39 0 4265.2 0 153.84 0 6366.8 5260 5658.3 1526 434 1500 14284;14285;14286;14287;14288;14289 15458;15459 15458 2 KETDLIIMDLR Acetyl (Protein N-term);GlyGly (K) 1501.781 0.78102903 285 O43852-14;O43852-3;O43852-4 CALU Calumenin yes no 1 1 0 0 1 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 1 64.133 66.731 2 0.046712 11377 Miao_Sh-H9_Flag_mass3_141226_01 41.164 20.934 8641.5 0 0 0 585.48 1561.7 1829.4 3945.5 0 0 0 306.94 412.4 1527 285 1501 14290;14291;14292;14293;14294;14295 15460 15460 0 KETESEAEDNLDDLEK Unmodified 1863.8222 0.82216138 12 Q8IYB3;A9Z1X7;E9PCT1;Q8IYB3-2 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 50.56 51.412 3 0.00027175 12847 Miao_Sh-H9_proteinG_mass3_141226_01 78.501 59.678 0 0 0 0 0 0 0 0 0 0 0 0 0 1528 12 1502 14296 15461 15461 1 KEVEVVEIIQATIIR Unmodified 1739.0193 0.019285464 573 Q14764;H3BQK6;I3L155 MVP Major vault protein yes no 0 0 0 0 1 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 2 3 1 1 2 1 114.57 106.21 2;3 4.2936E-28 40228 Miao_Sh-H9_proteinG_mass3_141226_02 165.89 138.12 75973 0 0 0 21900 0 14481 0 0 0 23418 16173 0 1529 573 1503 14297;14298;14299;14300;14301;14302;14303;14304;14305;14306 15462;15463;15464;15465;15466;15467;15468;15469;15470;15471;15472;15473;15474;15475;15476;15477;15478;15479;15480 15474 19 KFDQLLAEEK Unmodified 1219.6449 0.64485312 433;434;158 P35579;P35579-2;P35580;P35580-3;P35580-2;F8W6L6;P35580-4;Q7Z406;F2Z2U8;G8JLL9;Q7Z406-6;Q7Z406-2 MYH9;MYH10;MYH14 Myosin-9;Myosin-10;Myosin-14 no no 0 0 0 0 1 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 3 2 4 4 2 2 3 6 6 56.971 55.844 2;3 3.2331E-17 11466 Miao_Sh-c_proteinG_mass3_141226_03 164.81 75.732 226860 3854.8 2273.2 7005.2 11580 15564 34819 8304.3 10683 11118 41829 36500 43326 1530 433;434;158 1504 14307;14308;14309;14310;14311;14312;14313;14314;14315;14316;14317;14318;14319;14320;14321;14322;14323;14324;14325;14326;14327;14328;14329;14330;14331;14332;14333;14334;14335;14336;14337;14338;14339;14340;14341;14342;14343;14344;14345 15481;15482;15483;15484;15485;15486;15487;15488;15489;15490;15491;15492;15493;15494;15495;15496;15497;15498;15499;15500;15501;15502;15503;15504;15505;15506;15507;15508;15509;15510;15511;15512;15513;15514;15515;15516;15517;15518;15519;15520;15521;15522 15486 41 KFDVNTSAVQVLIEHIGNLDR Unmodified 2367.2547 0.25465814 535 Q00610;Q00610-2 CLTC Clathrin heavy chain 1 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 2 1 2 1 1 1 104.23 103.51 3;4 3.1519E-37 25123 Miao_Sh-H9_Flag_mass3_141226_02 120.66 108.03 21949 2829.6 0 3512.9 1146.1 0 0 3097.4 3529.2 5562.9 0 2270.7 0 1531 535 1505 14346;14347;14348;14349;14350;14351;14352;14353;14354;14355 15523;15524;15525 15524 2 KFESQDTVALLEAILDGIVDPVDSTLR Unmodified 2943.5441 0.54408303 533 P78527;E7EUY0;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 0 1 By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 121.75 122.1 3 3.9007E-08 30136 Miao_Sh-c_Flag_mass3_141226_03 64.423 53.666 0 0 0 0 0 0 0 0 0 0 0 0 0 1532 533 1506 14356;14357 15526;15527 15527 2 KFGATLEIVTDK Unmodified 1320.7289 0.7289171 510 P62495;B7Z7P8;Q96CG1 ETF1 Eukaryotic peptide chain release factor subunit 1 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 95.849 82.265 3 0.014456 28864 Miao_Sh-c_proteinG_mass3_141226_03 80.312 47.223 0 0 0 0 0 0 0 0 0 0 0 0 0 1533 510 1507 14358 15528 15528 1 KGDSSAEELK Unmodified 1062.5193 0.51931826 414 P26373;P26373-2 RPL13 60S ribosomal protein L13 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 26.229 26.781 2 0.012108 5616 Miao_Sh-H9_proteinG_mass3_141226_01 107.09 26.873 0 0 0 0 0 0 0 0 0 0 0 0 0 1534 414 1508 14359 15529 15529 1 KGNFNYIEFTR Unmodified 1387.6884 0.68844927 240 O14950;P19105;J3QRS3 MYL12B;MYL12A Myosin regulatory light chain 12B;Myosin regulatory light chain 12A yes no 0 0 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 4 3 3 2 3 2 4 24 14 72.929 71.103 2;3 6.9699E-38 10266 Miao_Sh-c_proteinG_mass3_141226_01 183.37 151.25 451670 9355.9 30324 31305 51406 43872 29133 36265 48841 52337 60347 29625 28861 1535 240 1509 14360;14361;14362;14363;14364;14365;14366;14367;14368;14369;14370;14371;14372;14373;14374;14375;14376;14377;14378;14379;14380;14381;14382;14383;14384;14385;14386;14387;14388;14389;14390;14391;14392;14393;14394;14395;14396;14397;14398;14399;14400;14401;14402;14403;14404;14405;14406;14407;14408;14409;14410;14411;14412;14413;14414;14415;14416;14417;14418;14419;14420;14421;14422;14423;14424;14425 15530;15531;15532;15533;15534;15535;15536;15537;15538;15539;15540;15541;15542;15543;15544;15545;15546;15547;15548;15549;15550;15551;15552;15553;15554;15555;15556;15557;15558;15559;15560;15561;15562;15563;15564;15565;15566;15567;15568;15569;15570;15571;15572;15573;15574;15575;15576;15577;15578;15579;15580;15581;15582;15583;15584;15585;15586;15587;15588;15589;15590;15591;15592;15593;15594;15595;15596;15597;15598;15599;15600;15601;15602;15603;15604;15605;15606;15607;15608;15609;15610;15611;15612;15613;15614;15615;15616;15617;15618;15619;15620;15621;15622;15623;15624;15625;15626;15627;15628;15629;15630;15631;15632;15633;15634;15635;15636;15637;15638;15639;15640;15641;15642 15544 112 KGQGGAGAGDDEEED Unmodified 1433.5543 0.55425979 459 P46781 RPS9 40S ribosomal protein S9 yes yes 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 25.238 26.809 2 0.053708 5575 Miao_Sh-H9_proteinG_mass3_141226_01 66.215 62.77 296.54 11.968 0 0 0 22.606 0 0 0 0 261.96 0 0 1536 459 1510 14426;14427;14428 15643 15643 1 KGQVIQF Unmodified 818.46504 0.46503826 228 Q969Q0;P83881;J3KQN4;R4GN19 RPL36AL;RPL36A 60S ribosomal protein L36a-like;60S ribosomal protein L36a yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 52.686 55.644 2 0.028911 13678 Miao_Sh-H9_proteinG_mass3_141226_03 69.093 41.389 4317.6 0 0 0 0 0 0 0 0 0 0 0 4317.6 1537 228 1511 14429;14430 15644;15645 15645 1 KGTVEGFEPADNK Unmodified 1390.6729 0.67285879 440 P37108;H0YLA2 SRP14 Signal recognition particle 14 kDa protein yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 1 2 1 1 1 37.26 39.165 2;3 0.0074086 8252 Miao_Sh-H9_proteinG_mass3_141226_01 81.904 29.414 8869.8 69.701 27.618 205.16 0 0 1986.3 0 35.508 0 3696.2 2849.2 0 1538 440 1512 14431;14432;14433;14434;14435;14436;14437;14438 15646;15647 15647 2 KHEAFESDLAAHQDR Unmodified 1752.818 0.81795989 283;362 O43707;O43707-2;P35609;P35609-2;P12814;P12814-2;P12814-3;P12814-4;H9KV75;H7C5W8 ACTN4;ACTN2;ACTN1 Alpha-actinin-4;Alpha-actinin-2;Alpha-actinin-1 no no 0 0 0 0 1 By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 35.231 37.175 4 1.0606E-05 3597 Miao_Sh-H9_Flag_mass3_141226_03 81.526 70.076 1995.8 204.07 192.66 0 0 444.08 672.03 0 0 483 0 0 0 1539 283;362 1513 14439;14440;14441;14442;14443 15648;15649;15650 15650 3 KIDFSEFLSLLGDIATDYHK Unmodified 2311.1736 0.17361385 425 P31151 S100A7 Protein S100-A7 yes yes 0 0 0 0 1 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 1 119.69 116.8 4 5.0244E-06 30842 Miao_Sh-c_proteinG_mass3_141226_01 63.674 55.749 10615 0 0 0 5024.8 5530.5 59.928 0 0 0 0 0 0 1540 425 1514 14444;14445;14446 15651;15652 15651 2 KIEDNNTLVFIVDVK Unmodified 1745.9564 0.95635086 9 P62750;H7BY10;K7EJV9;K7ERT8;A8MUS3;K7EMA7 RPL23A 60S ribosomal protein L23a yes no 0 0 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 5 1 1 7 2 3 2 1 1 4 5 4 92.11 87.653 2;3 1.2817E-36 37003 Miao_Sh-H9_proteinG_mass3_141226_03 170 130.3 117050 7308.2 0 338.66 2820.6 4527.1 24405 9240 4501 4578.4 24904 0 34423 1541 9 1515 14447;14448;14449;14450;14451;14452;14453;14454;14455;14456;14457;14458;14459;14460;14461;14462;14463;14464;14465;14466;14467;14468;14469;14470;14471;14472;14473;14474;14475;14476;14477;14478;14479;14480;14481;14482 15653;15654;15655;15656;15657;15658;15659;15660;15661;15662;15663;15664;15665;15666;15667;15668;15669;15670;15671;15672;15673;15674;15675;15676;15677;15678;15679;15680;15681;15682;15683;15684;15685;15686;15687;15688;15689;15690;15691;15692;15693;15694;15695;15696;15697;15698;15699;15700;15701 15693 49 KITIADCGQLE Unmodified 1246.6227 0.62273747 522 P62937;Q567Q0 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 1 1 51.74 54.472 2 0.013463 13129 Miao_Sh-H9_proteinG_mass3_141226_03 86.699 51.261 0 0 0 0 0 0 0 0 0 0 0 0 0 1542 522 1516 14483;14484 15702;15703 15703 2 KKPLTSGMDASELTPR GlyGly (K) 1843.9462 0.94619688 124 Q8NEV8;F5GXG5;E9PPH6;E9PC93;E7ENT4;Q8NEV8-2 EXPH5 Exophilin-5 yes no 0 1 0 0 2 By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 2 3 2 1 1 1 73.751 70.794 2;3 7.4343E-05 13651 Miao_Sh-H9_Flag_mass3_141226_01 76.01 31.398 524690 24542 0 30196 645.55 0 0 112430 184200 165810 2219.9 2151.3 2499.4 1543 124 1517 14485;14486;14487;14488;14489;14490;14491;14492;14493;14494;14495;14496;14497 15704;15705;15706;15707;15708;15709;15710;15711;15712;15713 15706 8;9 10 KLDGETTDLQDQIAELQAQIDELK Unmodified 2713.3658 0.36578431 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 1 1 118.87 103.48 3 0.001027 38782 Miao_Sh-H9_proteinG_mass3_141226_03 53.751 42.986 0 0 0 0 0 0 0 0 0 0 0 0 0 1544 434 1518 14498;14499 15714;15715 15715 2 KLDPGSEETQTLVR Unmodified 1571.8155 0.81550028 417 P26641;B4DTG2 EEF1G Elongation factor 1-gamma yes no 0 0 0 0 1 By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 2 46.998 47.459 3 3.478E-11 5880 Miao_Sh-H9_Flag_mass3_141226_02 143.93 99.386 4113.4 628.53 559.32 590.79 652.95 0 0 0 1681.8 0 0 0 0 1545 417 1519 14500;14501;14502;14503;14504;14505 15716;15717;15718 15717 3 KLEGDSTDLSDQIAELQAQIAELK Unmodified 2614.3338 0.3337559 433 P35579 MYH9 Myosin-9 yes yes 0 0 0 0 1 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching 2 1 100.75 104.61 3;4 1.031E-20 25782 Miao_Sh-c_proteinG_mass3_141226_01 95.519 74.277 3631.8 0 0 0 0 3631.8 0 0 0 0 0 0 0 1546 433 1520 14506;14507;14508 15719;15720;15721 15719 2 KLEVNEAELLR Unmodified 1312.7351 0.73506511 598 Q6NZI2 PTRF Polymerase I and transcript release factor yes yes 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 57.054 57.595 3 2.6908E-06 9651 Miao_Sh-H9_Flag_mass3_141226_03 140.24 49.643 12968 0 0 0 0 0 0 3889.9 4324.5 3742.8 653.64 0 357.42 1547 598 1521 14509;14510;14511;14512;14513 15722;15723 15723 2 KMICDIFR Oxidation (M);QQTGG (K) 1568.7439 0.74393201 587 Q32VQ0 yes yes 0 0 1 1 1 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 59.404 60.03 4 0.025444 8421 Miao_Sh-c_Flag_mass3_141226_03 43.272 20.128 2943.7 0 0 2193.8 0 0 0 749.87 0 0 0 0 0 1548 587 1522 14514;14515 15724 15724 76 1 KPLVIIAEDVDGEALSTLVLNR Unmodified 2364.3264 0.3264261 354 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 0 1 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 104.97 102.66 3 0.014325 24316 Miao_Sh-c_proteinG_mass3_141226_02 51.827 43.902 8311.1 1235.2 1296.4 0 0 4014.9 1764.6 0 0 0 0 0 0 1549 354 1523 14516;14517;14518;14519 15725;15726 15725 2 KQELEEILHDLESR Unmodified 1737.8897 0.88972785 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 1 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 1 1 105.77 97.892 3;4 4.2843E-11 37903 Miao_Sh-c_proteinG_mass3_141226_03 142.45 107.42 42943 0 565.89 0 2745.9 0 9214.8 985.95 0 0 18139 4750.2 6541.3 1550 434 1524 14520;14521;14522;14523;14524;14525;14526;14527;14528 15727;15728;15729;15730;15731;15732;15733;15734 15730 8 KQISNLQQSISDAEQR Unmodified 1843.9388 0.93880331 314 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 52.021 54.467 3 0.00085127 14202 Miao_Sh-H9_proteinG_mass3_141226_01 75.911 56.667 18290 0 0 0 0 0 4924.5 0 0 965.13 3871.8 4007.4 4520.9 + 1551 314 1525 14529;14530;14531;14532;14533 15735 15735 1 KQPPKEPSEVPTPK Unmodified 1560.8512 0.8511575 384 P17096-2 HMGA1 High mobility group protein HMG-I/HMG-Y yes yes 0 0 0 0 2 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 2 3 1 31.797 33.609 3;4 0.00056059 6379 Miao_Sh-H9_proteinG_mass3_141226_02 83.061 69.048 15406 0 0 0 0 0 3779.4 0 152.69 0 1822.2 7239.4 2412.8 1552 384 1526 14534;14535;14536;14537;14538;14539;14540;14541 15736;15737;15738;15739;15740;15741;15742;15743;15744 15739 9 KQPPVSPGTALVGSQK Unmodified 1592.8886 0.88860564 383 P17096;H7BYM6;P17096-3 HMGA1 High mobility group protein HMG-I/HMG-Y yes no 0 0 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 3 2 3 1 4 3 3 3 6 11 5 43.004 44.474 2;3;4 4.1021E-76 10273 Miao_Sh-H9_proteinG_mass3_141226_01 204.05 175.15 217150 2246.4 2513.8 1953.2 4013.8 3608.1 75340 1302.5 7581.1 7435 41661 28440 41052 1553 383 1527 14542;14543;14544;14545;14546;14547;14548;14549;14550;14551;14552;14553;14554;14555;14556;14557;14558;14559;14560;14561;14562;14563;14564;14565;14566;14567;14568;14569;14570;14571;14572;14573;14574;14575;14576;14577;14578;14579;14580;14581;14582;14583;14584;14585;14586 15745;15746;15747;15748;15749;15750;15751;15752;15753;15754;15755;15756;15757;15758;15759;15760;15761;15762;15763;15764;15765;15766;15767;15768;15769;15770;15771;15772;15773;15774;15775;15776;15777;15778;15779;15780;15781;15782;15783;15784;15785;15786;15787;15788;15789;15790;15791;15792;15793;15794;15795;15796;15797;15798;15799;15800;15801;15802;15803;15804 15767 60 KSDIDEIVLVGGSTR Unmodified 1587.8468 0.84680041 355 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 3 2 2 2 5 7 2 4 3 66.179 66.683 2;3 1.3023E-21 17968 Miao_Sh-H9_proteinG_mass3_141226_01 107.46 82.443 160240 12892 10809 12096 8442.5 4670.4 7901.1 22184 31865 22683 10357 8914.8 7428.2 1554 355 1528 14587;14588;14589;14590;14591;14592;14593;14594;14595;14596;14597;14598;14599;14600;14601;14602;14603;14604;14605;14606;14607;14608;14609;14610;14611;14612;14613;14614;14615;14616;14617;14618;14619;14620;14621;14622 15805;15806;15807;15808;15809;15810;15811;15812;15813;15814;15815;15816;15817;15818;15819;15820;15821;15822;15823;15824;15825;15826;15827;15828;15829;15830;15831;15832;15833;15834;15835;15836;15837;15838;15839;15840;15841 15834 35 KVDDDLGTIESLEEAK Unmodified 1760.868 0.86798936 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 2 1 1 2 2 3 2 69.052 69.273 2;3 5.4287E-21 12916 Miao_Sh-c_proteinG_mass3_141226_01 151.11 109.11 56606 3973.6 218.54 2467.3 9316.2 7363.7 0 4094.4 4045.8 1311.7 13043 0 10772 1555 434 1529 14623;14624;14625;14626;14627;14628;14629;14630;14631;14632;14633;14634;14635;14636;14637;14638;14639;14640;14641;14642 15842;15843;15844;15845;15846;15847;15848;15849;15850;15851;15852;15853;15854;15855;15856 15844 13 KVEAQLQELQVK Unmodified 1411.8035 0.80347903 433 P35579 MYH9 Myosin-9 yes yes 0 0 0 0 1 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 3 2 3 2 1 1 3 4 3 56.305 56.113 2;3 3.8965E-42 11554 Miao_Sh-c_proteinG_mass3_141226_03 188.96 65.957 202460 2187 2646.7 1829.7 7763.8 4379.9 49474 4474.5 5503.8 0 53200 39487 31515 1556 433 1530 14643;14644;14645;14646;14647;14648;14649;14650;14651;14652;14653;14654;14655;14656;14657;14658;14659;14660;14661;14662;14663;14664;14665;14666;14667;14668;14669 15857;15858;15859;15860;15861;15862;15863;15864;15865;15866;15867;15868;15869;15870;15871;15872;15873;15874;15875;15876;15877;15878;15879;15880;15881;15882;15883;15884;15885 15860 29 KVESLQEEIAFLK Unmodified 1532.845 0.84500949 346 P08670;B0YJC4;B0YJC5;Q5JVS8 VIM Vimentin yes no 0 0 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 2 1 2 2 2 2 1 1 2 1 9 88.36 84.696 2;3 1.4253E-23 15526 Miao_Sh-H9_Flag_mass3_141226_01 164.13 117.78 86127 7988.8 25922 2523.6 10878 5948.5 4573 10512 0 2570.4 8732.7 5094.2 1384.6 1557 346 1531 14670;14671;14672;14673;14674;14675;14676;14677;14678;14679;14680;14681;14682;14683;14684;14685;14686;14687;14688;14689;14690;14691;14692;14693;14694;14695;14696 15886;15887;15888;15889;15890;15891;15892;15893;15894;15895;15896;15897;15898;15899;15900;15901;15902;15903;15904;15905;15906;15907;15908;15909;15910;15911;15912 15894 27 KVPQVSTPTLVEVSR Unmodified 1638.9305 0.93047046 99 CON__P02769;P02768;H0YA55;CON__P02768-1;C9JKR2;D6RHD5;B7WNR0;P02768-2 ALB Serum albumin yes no 0 0 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 2 1 1 2 1 57.692 58.778 3 1.603E-08 9499 Miao_Sh-H9_Flag_mass3_141226_02 125.33 105.65 30351 4288.1 2608.2 3140.3 0 0 800.26 3426.6 4812.7 0 5538.9 5736.1 0 + 1558 99 1532 14697;14698;14699;14700;14701;14702;14703;14704;14705;14706;14707;14708 15913;15914;15915;15916;15917;15918;15919;15920;15921;15922;15923;15924;15925;15926;15927;15928 15923 16 KVPVVQAYAFGK Unmodified 1305.7445 0.74450759 393 P21589;P21589-2;H0Y7R7 NT5E 5'-nucleotidase yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 57.413 56.611 3 0.020488 8652 Miao_Sh-H9_Flag_mass3_141226_02 75.819 61.884 0 0 0 0 0 0 0 0 0 0 0 0 0 1559 393 1533 14709 15929 15929 1 KVPWFDQQNGR Unmodified 1373.684 0.6840326 623 Q92522 H1FX Histone H1x yes yes 0 0 0 0 1 By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 53.927 54.178 3 0.038474 6626 Miao_Sh-c_Flag_mass3_141226_02 87.568 71.19 0 0 0 0 0 0 0 0 0 0 0 0 0 1560 623 1534 14710;14711 15930;15931 15930 2 KVTHAVVTVPAYFNDAQR Unmodified 2015.0589 0.058858868 355 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching 3 2 1 1 1 1 2 3 3 2 58.299 59.186 3;4 1.724E-07 8120 Miao_Sh-c_Flag_mass3_141226_03 79.676 68.637 39956 5643.2 4954 3033.7 1074.8 1674.8 1185.6 1886.6 8767.3 8608.9 0 3127 0 1561 355 1535 14712;14713;14714;14715;14716;14717;14718;14719;14720;14721;14722;14723;14724;14725;14726;14727;14728;14729;14730 15932;15933;15934;15935;15936;15937;15938;15939;15940;15941;15942;15943;15944;15945;15946;15947;15948;15949;15950 15939 17 KWEQQLQEEQEQKR GlyGly (K);QQTGG (K) 2471.1789 0.17892702 148 Q8WWI1;Q8WWI1-3;Q8WWI1-2;H0YDQ3;E9PMP7;H0Y424;E9PMS6;E9PMT2;F8WD26;J3KP06;E9PLH4;Q8WWI1-4 LMO7 LIM domain only protein 7 yes no 0 1 0 1 2 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching 2 1 82.929 78.501 3 1.6056E-05 26617 Miao_Sh-H9_proteinG_mass3_141226_01 83.823 55.468 0 0 0 0 0 0 0 0 0 0 0 0 0 1562 148 1536 14731;14732;14733 15951;15952;15953 15953 10 0 3 KYDAFLASESLIK Unmodified 1483.7922 0.79224564 519 P62906 RPL10A 60S ribosomal protein L10a yes yes 0 0 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 4 2 1 6 1 4 94.136 87.387 2;3 1.3452E-08 32383 Miao_Sh-H9_proteinG_mass3_141226_01 133.23 99.641 75064 0 0 0 1365.7 8088.6 16871 0 5430.2 0 21044 11672 10592 1563 519 1537 14734;14735;14736;14737;14738;14739;14740;14741;14742;14743;14744;14745;14746;14747;14748;14749;14750;14751;14752;14753;14754 15954;15955;15956;15957;15958;15959;15960;15961;15962;15963;15964;15965;15966;15967;15968;15969;15970;15971;15972;15973;15974;15975;15976;15977;15978;15979;15980;15981;15982;15983;15984 15973 31 KYEEIDNAPEER Unmodified 1491.6842 0.68415175 465 P49411 TUFM Elongation factor Tu, mitochondrial yes yes 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 37.281 38.133 3 0.027212 8176 Miao_Sh-H9_proteinG_mass3_141226_01 98.942 79.81 0 0 0 0 0 0 0 0 0 0 0 0 0 1564 465 1538 14755 15985 15985 1 LAAAFAVSR Unmodified 904.51305 0.51305109 484 P55084;P55084-2;F5GZQ3 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 2 50.803 51.488 2 0.0013657 12877 Miao_Sh-H9_proteinG_mass3_141226_01 100.25 46.088 0 0 0 0 0 0 0 0 0 0 0 0 0 1565 484 1539 14756;14757;14758 15986;15987;15988 15988 3 LAAAILGGVDQIHIK Unmodified 1517.893 0.89296274 394;4 A6NHQ2;R4GMW7;P22087;M0R0P1;M0R299;M0QXL5;M0R2Q4;M0R2U2;M0R1H0;M0R2B0 FBLL1;FBL rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1;rRNA 2'-O-methyltransferase fibrillarin no no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 72.866 75.523 3 0.00070642 15025 Miao_Sh-c_proteinG_mass3_141226_01 65.956 50.411 4601.2 0 0 0 2651.4 1949.8 0 0 0 0 0 0 0 1566 4;394 1540 14759;14760;14761 15989;15990 15989 2 LAAAILGGVDQIHIKPGAK Unmodified 1871.0993 0.09926712 394 P22087;M0R0P1;M0R299;M0QXL5;M0R2Q4;M0R2U2;M0R1H0;M0R2B0 FBL rRNA 2'-O-methyltransferase fibrillarin yes no 0 0 0 0 1 By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 1 67.422 68.634 4 0.011946 11544 Miao_Sh-c_Flag_mass3_141226_03 51.495 47.501 10909 1935.2 0 1174.5 0 1497 0 1353.7 0 0 3535.7 1412.4 0 1567 394 1541 14762;14763;14764;14765;14766;14767 15991;15992 15991 1 LAADDFR Unmodified 806.39227 0.39226725 104;97;102;109;178 P13645;CON__P13645;CON__P02535-1;Q7Z3Y7;CON__Q148H6;CON__Q7Z3Y7;Q92764;O76014;Q2M2I5;Q15323;Q14532;O76013;Q14525;CON__Q14525;CON__Q9UE12;CON__Q15323;CON__A2A5Y0;CON__Q92764;C4AM86;CON__Q14532;CON__A2AB72;CON__Q497I4;CON__O76015;CON__O76013;CON__O76014;CON__REFSEQ:XP_986630;CON__Q2M2I5;O76013-2;O76015;P02533;CON__P02533;P19012;CON__P19012;CON__A2A4G1;CON__Q9Z2K1;CON__Q3ZAW8;P08779;CON__P08779;Q04695;CON__Q04695;CON__Q9QWL7;F5GWP8;K7EPJ9;P05783;F8VZY9 KRT10;KRT28;KRT35;KRT37;KRT24;KRT31;KRT32;KRT36;KRT33B;KRT38;KRT14;KRT15;KRT16;KRT17;KRT18 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28;Keratin, type I cuticular Ha5;Keratin, type I cuticular Ha7;Keratin, type I cytoskeletal 24;Keratin, type I cuticular Ha1;Keratin, type I cuticular Ha2;Keratin, type I cuticular Ha6;Keratin, type I cuticular Ha3-II;Keratin, type I cuticular Ha8;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 18 no no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 41.522 44.085 2 9.6118E-25 9632 Miao_Sh-H9_proteinG_mass3_141226_03 181.2 103.46 58735 0 0 0 1262.4 1500.8 19897 0 0 1680.8 14324 10086 9984 + 1568 104;97;102;109;178 1542 14768;14769;14770;14771;14772;14773;14774;14775 15993;15994;15995;15996;15997;15998;15999;16000;16001;16002;16003;16004;16005;16006 16004 14 LAADEDDDDDDEEDDDEDDDDDDFDDEEAEEK Unmodified 3722.1951 0.19506631 334 P06748;P06748-2;P06748-3 NPM1 Nucleophosmin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 54.594 56.073 3 0.00038215 14175 Miao_Sh-H9_proteinG_mass3_141226_02 30.609 30.579 0 0 0 0 0 0 0 0 0 0 0 0 0 1569 334 1543 14776;14777 16007;16008 16008 2 LAAENTEMQKDYSSFLSRK Oxidation (M) 2233.0685 0.068496856 205 H0YBA9 SNX31 yes yes 0 0 1 0 2 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 50.38 52.268 3 0.00062345 6856 Miao_Sh-H9_Flag_mass3_141226_01 59.728 19.997 144600 35875 0 26147 0 558.67 877.67 37717 0 43424 0 0 0 1570 205 1544 14778;14779;14780;14781;14782;14783 16009;16010;16011;16012;16013;16014 16012 24 6 LAALNPESNTAGLDIFAK Unmodified 1843.968 0.96797818 263 O00299 CLIC1 Chloride intracellular channel protein 1 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 1 1 1 1 1 1 3 2 1 88.712 86.471 2;3 3.1433E-16 16623 Miao_Sh-c_Flag_mass3_141226_03 122.16 97.744 31127 5296 3032.4 0 0 3250 3412.6 5226.2 220.65 6703.5 3985.1 0 0 1571 263 1545 14784;14785;14786;14787;14788;14789;14790;14791;14792;14793;14794;14795;14796;14797 16015;16016;16017;16018;16019;16020;16021;16022;16023;16024;16025;16026;16027;16028;16029;16030;16031;16032;16033;16034 16022 19 LAANAFLAQR Unmodified 1073.5982 0.5981777 288 O60701;O60701-3;O60701-2 UGDH UDP-glucose 6-dehydrogenase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 58.001 59.43 2 0.010655 15569 Miao_Sh-H9_proteinG_mass3_141226_02 73.233 43.466 0 0 0 0 0 0 0 0 0 0 0 0 0 1572 288 1546 14798;14799 16035;16036 16036 2 LAAQSCALSLVR Unmodified 1287.6969 0.69690547 548 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 2 1 64.029 62.459 2 0.00040374 16815 Miao_Sh-H9_proteinG_mass3_141226_02 102.87 60.03 10319 0 0 0 0 0 2994 0 1060 1576.6 2334.2 1934.9 419.7 1573 548 1547 14800;14801;14802;14803;14804;14805;14806 16037;16038;16039 16038 3 LAAVDATVNQVLASR Unmodified 1526.8417 0.84165545 57 Q15084;Q15084-3;F8WA83;B5MCQ5;Q15084-2 PDIA6 Protein disulfide-isomerase A6 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 92.29 78.706 2 0.030604 27415 Miao_Sh-c_proteinG_mass3_141226_03 44.252 34.715 0 0 0 0 0 0 0 0 0 0 0 0 0 1574 57 1548 14807 16040 16040 1 LADFGLAR Unmodified 861.47085 0.47085192 330 P06493;E5RIU6;P24941;Q00526;K7ELV5;E7ESI2;G3V5T9;P24941-2;Q9NYV4;Q14004;P50750;Q00536;Q00537;Q00534;O94921;Q07002;Q00535;Q14004-2;P50750-2;P11802;Q9NYV4-2;Q96Q40;Q07002-3;Q00537-2;Q00536-2;F8VXD2;F8VYH9;F8VZZ0;F8VTV8;F8VWX7;F8VZ51;K7EJ83;H0YAZ9;E7EUK8;E5RGN0;F5H6Z0;J3QSD7;B4DNF9;Q00535-2;Q96Q40-2;Q96Q40-4;Q96Q40-3;O94921-3;Q96Q40-5;O94921-2;Q07002-2;Q00536-3;Q9NYV4-3 CDK1;CDK2;CDK3;CDK12;CDK13;CDK9;CDK16;CDK17;CDK6;CDK14;CDK18;CDK5;CDK4;CDK15 Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3;Cyclin-dependent kinase 12;Cyclin-dependent kinase 13;Cyclin-dependent kinase 9;Cyclin-dependent kinase 16;Cyclin-dependent kinase 17;Cyclin-dependent kinase 6;Cyclin-dependent kinase 14;Cyclin-dependent kinase 18;Cyclin-dependent-like kinase 5;Cyclin-dependent kinase 4;Cyclin-dependent kinase 15 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 56.137 58.255 2 0.0065206 9007 Miao_Sh-H9_Flag_mass3_141226_01 98.523 29.091 8722.2 0 0 0 0 0 2063.2 1493.1 0 3035 0 2130.9 0 1575 330 1549 14808;14809;14810;14811 16041;16042;16043;16044 16042 4 LADSPPPQVWQLISK Unmodified 1677.909 0.90900673 357 P11441;Q5HY81 UBL4A Ubiquitin-like protein 4A yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 2 1 1 1 99.229 90.457 3 0.0013269 19693 Miao_Sh-H9_Flag_mass3_141226_02 61.622 31.416 3122 0 0 0 0 0 0 0 1858.9 0 0 527.02 736.1 1576 357 1550 14812;14813;14814;14815;14816 16045;16046;16047 16047 3 LAEAQIEELR Unmodified 1170.6245 0.62445203 651 Q9NR28;Q9NR28-2;Q9NR28-3;F5H796;F5GXT8 DIABLO Diablo homolog, mitochondrial yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 1 60.752 58.905 2 1.4174E-18 8969 Miao_Sh-H9_Flag_mass3_141226_02 163.46 118.92 17306 3522.7 586.75 3005.4 0 0 0 1447.7 6958.9 763.95 0 0 1021 1577 651 1551 14817;14818;14819;14820;14821;14822;14823 16048;16049;16050;16051 16050 4 LAEIGAPIQGNR Unmodified 1237.6779 0.67788459 155 Q13435;E9PPJ0;E9PJT3;E9PJ04;H0YCG1 SF3B2 Splicing factor 3B subunit 2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 48.072 51.13 2 0.054695 11888 Miao_Sh-H9_proteinG_mass3_141226_03 42.976 25.31 0 0 0 0 0 0 0 0 0 0 0 0 0 1578 155 1552 14824 16052 16052 1 LAELEEALQK Unmodified 1142.6183 0.61830402 105 P13647;CON__P13647;H0YI76 KRT5 Keratin, type II cytoskeletal 5 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 1 55.606 57.749 2 1.584E-55 15840 Miao_Sh-H9_proteinG_mass3_141226_02 203.55 113.29 119980 201.6 0 0 5322.6 254.65 15864 0 0 1336.2 52973 41820 2212.9 + 1579 105 1553 14825;14826;14827;14828;14829;14830;14831;14832 16053;16054;16055;16056;16057 16057 5 LAELEEFINGPNNAHIQQVGDR Unmodified 2463.2142 0.21424989 535 Q00610;Q00610-2;J3KS13 CLTC Clathrin heavy chain 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 93.438 88.936 3 0.012557 32211 Miao_Sh-H9_proteinG_mass3_141226_01 38.724 31.592 5257.1 0 0 0 0 0 0 333.51 1485.5 688.65 1644.1 1105.4 0 1580 535 1554 14833;14834;14835;14836;14837 16058 16058 0 LAFPSPFGHLSEGFSHSR Unmodified 1971.9591 0.95914482 563 Q13501;Q13501-2;E7EMC7;E9PFW8;C9JRJ8 SQSTM1 Sequestosome-1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 85.125 79.649 3 7.9787E-06 17162 Miao_Sh-H9_Flag_mass3_141226_02 71.376 61.685 7966.2 0 0 1726.1 0 0 520.16 0 2830.1 0 0 2889.8 0 1581 563 1555 14838;14839;14840;14841 16059;16060 16059 2 LAGESESNLR Unmodified 1074.5306 0.53055165 483 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 1 2 2 2 2 2 2 1 1 1 34.543 35.799 2 5.5444E-19 3438 Miao_Sh-H9_Flag_mass3_141226_03 125.3 75.853 8090.9 909.04 949.57 871.02 0 250.83 965.6 920.04 1136.4 1421.3 443.86 94.371 128.85 1582 483 1556 14842;14843;14844;14845;14846;14847;14848;14849;14850;14851;14852;14853;14854;14855;14856;14857;14858;14859 16061;16062;16063;16064;16065;16066;16067;16068;16069;16070 16070 9 LAGESESNLRK Unmodified 1202.6255 0.62551466 483 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 1 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 29.682 29.692 3 0.017546 2863 Miao_Sh-c_Flag_mass3_141226_03 100.58 55.503 874.7 270.31 341.92 199.27 0 0 0 38.184 0 25.026 0 0 0 1583 483 1557 14860;14861;14862;14863;14864 16071 16071 1 LAGIINFQRPK Unmodified 1255.7401 0.74009091 262 O00232;O00232-2 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes no 0 0 0 0 1 By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 2 1 1 1 1 1 1 62.49 60.399 3 0.0024075 8432 Miao_Sh-c_Flag_mass3_141226_01 82.287 50.865 6758.6 1146.8 656.56 777.78 427.67 0 0 0 2609.3 0 866.77 0 273.77 1584 262 1558 14865;14866;14867;14868;14869;14870;14871;14872 16072;16073 16072 2 LAIAQSR Unmodified 757.44464 0.44463717 675 Q9Y2E6;Q9Y2E6-2 DTX4 E3 ubiquitin-protein ligase DTX4 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 1 32.485 33.512 2 0.00043126 3135 Miao_Sh-c_proteinG_mass3_141226_02 122.79 0.66186 443.73 0 0 23.881 419.85 0 0 0 0 0 0 0 0 1585 675 1559 14873;14874;14875 16074;16075 16075 2 LALDLEIATYR Unmodified 1276.7027 0.70270235 314 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 6 4 17 4 4 2 8 6 8 96.147 89.233 2;3 1.8938E-149 34040 Miao_Sh-H9_proteinG_mass3_141226_02 257.09 175.32 418860 5131.1 1886.3 3701.1 877.64 15118 7390.8 542.09 1825.7 9848.5 213720 70409 88405 + 1586 314 1560 14876;14877;14878;14879;14880;14881;14882;14883;14884;14885;14886;14887;14888;14889;14890;14891;14892;14893;14894;14895;14896;14897;14898;14899;14900;14901;14902;14903;14904;14905;14906;14907;14908;14909;14910;14911;14912;14913;14914;14915;14916;14917;14918;14919;14920;14921;14922;14923;14924;14925;14926;14927;14928;14929;14930;14931;14932;14933;14934;14935;14936;14937;14938;14939;14940;14941 16076;16077;16078;16079;16080;16081;16082;16083;16084;16085;16086;16087;16088;16089;16090;16091;16092;16093;16094;16095;16096;16097;16098;16099;16100;16101;16102;16103;16104;16105;16106;16107;16108;16109;16110;16111;16112;16113;16114;16115;16116;16117;16118;16119;16120;16121;16122;16123;16124;16125;16126;16127;16128;16129;16130;16131;16132;16133;16134;16135;16136;16137;16138;16139;16140;16141;16142;16143;16144;16145;16146;16147;16148;16149;16150;16151;16152;16153;16154;16155;16156;16157;16158;16159;16160;16161;16162;16163;16164;16165;16166;16167;16168;16169;16170;16171;16172;16173;16174;16175;16176;16177;16178;16179 16144 103 LALDVEIATYR Unmodified 1262.6871 0.68705229 98;105;108 P02538;CON__P02538;P48668;CON__P04259;CON__P48668;O95678;CON__O95678;Q01546;P12035;Q5XKE5;CON__P07744;CON__Q5XKE5;J3QST3;CON__P12035;CON__Q01546;H0YID6;CON__REFSEQ:XP_932229;P13647;CON__P13647;H0YI76;P35908;CON__P35908 KRT6A;KRT6C;KRT75;KRT76;KRT3;KRT79;KRT5;KRT2 Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 79;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 2 epidermal no no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 2 4 4 2 89.897 81.666 2;3 1.168E-61 28506 Miao_Sh-H9_proteinG_mass3_141226_01 203.8 88.386 59986 3732.2 0 0 9894.6 0 7590.4 6169.8 0 743.8 9543 10271 12041 + 1587 98;105;108 1561 14942;14943;14944;14945;14946;14947;14948;14949;14950;14951;14952;14953;14954;14955;14956;14957;14958 16180;16181;16182;16183;16184;16185;16186;16187;16188;16189;16190;16191;16192;16193;16194;16195;16196;16197;16198;16199;16200;16201;16202;16203;16204;16205;16206;16207;16208;16209;16210;16211 16195 32 LANQAADYFGDAFK Unmodified 1529.7151 0.71505795 618 Q8WUM4;Q8WUM4-2;F8WDK9 PDCD6IP Programmed cell death 6-interacting protein yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 1 1 79.902 80.744 2 0.0035019 13962 Miao_Sh-c_Flag_mass3_141226_03 63.682 48.52 5517.8 0 0 0 275.55 565.76 0 1961.7 556.57 2158.3 0 0 0 1588 618 1562 14959;14960;14961;14962;14963;14964;14965 16212;16213;16214 16213 3 LANQLLTDLVDDNYFYLFDLK Unmodified 2532.2788 0.27880721 223 Q6P2Q9;I3L0J9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 119.23 119.58 3 0.049159 29021 Miao_Sh-c_Flag_mass3_141226_02 29.965 24.001 0 0 0 0 0 0 0 0 0 0 0 0 0 1589 223 1563 14966 16215 16215 1 LAPDYDALDVANK Unmodified 1403.6933 0.69325988 9 P62750;H7BY10;K7EJV9;K7ERT8;A8MUS3;K7EMA7 RPL23A 60S ribosomal protein L23a yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 3 4 2 2 2 2 4 2 2 2 2 61.051 62.536 2;3 6.7921E-08 16129 Miao_Sh-H9_proteinG_mass3_141226_03 131.36 90.742 381440 20285 3010 12606 31737 30589 48827 34671 6763.2 32248 58948 47043 54711 1590 9 1564 14967;14968;14969;14970;14971;14972;14973;14974;14975;14976;14977;14978;14979;14980;14981;14982;14983;14984;14985;14986;14987;14988;14989;14990;14991;14992;14993;14994;14995 16216;16217;16218;16219;16220;16221;16222;16223;16224;16225;16226;16227;16228;16229;16230;16231;16232;16233;16234;16235;16236;16237;16238;16239;16240;16241;16242;16243;16244;16245;16246;16247;16248;16249;16250;16251;16252;16253;16254;16255;16256;16257;16258;16259;16260;16261;16262;16263;16264;16265;16266;16267;16268;16269;16270;16271;16272;16273;16274;16275;16276;16277;16278;16279;16280;16281;16282;16283;16284;16285;16286;16287 16285 72 LAPITSDPTEATAVGAVEASFK Unmodified 2174.1107 0.11067925 368 P14618;P14618-3 PKM Pyruvate kinase PKM yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 1 5 2 1 1 7 3 3 2 1 3 94.706 90.449 2;3 1.4216E-30 19650 Miao_Sh-H9_Flag_mass3_141226_01 116.45 103.56 106740 3150.8 8271.3 8848.4 0 6852.9 10973 14887 23131 0 12860 12431 5332.3 1591 368 1565 14996;14997;14998;14999;15000;15001;15002;15003;15004;15005;15006;15007;15008;15009;15010;15011;15012;15013;15014;15015;15016;15017;15018;15019;15020;15021;15022;15023;15024;15025;15026;15027 16288;16289;16290;16291;16292;16293;16294;16295;16296;16297;16298;16299;16300;16301;16302;16303;16304;16305;16306;16307;16308;16309;16310;16311;16312;16313;16314;16315;16316;16317;16318;16319;16320;16321;16322;16323;16324;16325;16326;16327;16328;16329;16330;16331 16313 44 LAQANGWGVMVSHR Unmodified 1524.762 0.76196534 333 P06733;P06733-2 ENO1 Alpha-enolase yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 54.607 57.389 3 0.00037536 8990 Miao_Sh-H9_Flag_mass3_141226_01 73.834 54.175 3255.4 0 0 0 233.64 996.35 624.69 1400.8 0 0 0 0 0 1592 333 1566 15028;15029;15030;15031 16332;16333;16334 16334 3 LAQDPFPLYPGEVLEK Unmodified 1814.9455 0.94545182 573 Q14764;H3BQK6;H3BRL2;H3BUK7;H3BNF6 MVP Major vault protein yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 3 2 4 1 1 5 15 18 102.41 94.793 2;3 1.2188E-29 34225 Miao_Sh-H9_proteinG_mass3_141226_01 160.81 133.59 404230 0 600.75 0 84689 31119 27180 0 778.69 1258.1 137870 65177 55559 1593 573 1567 15032;15033;15034;15035;15036;15037;15038;15039;15040;15041;15042;15043;15044;15045;15046;15047;15048;15049;15050;15051;15052;15053;15054;15055;15056;15057;15058;15059;15060;15061;15062;15063;15064;15065;15066;15067;15068;15069;15070;15071;15072;15073;15074;15075;15076;15077;15078;15079;15080;15081 16335;16336;16337;16338;16339;16340;16341;16342;16343;16344;16345;16346;16347;16348;16349;16350;16351;16352;16353;16354;16355;16356;16357;16358;16359;16360;16361;16362;16363;16364;16365;16366;16367;16368;16369;16370;16371;16372;16373;16374;16375;16376;16377;16378;16379;16380;16381;16382;16383;16384;16385;16386;16387;16388;16389;16390;16391;16392;16393;16394;16395;16396;16397;16398;16399;16400;16401;16402;16403;16404;16405;16406;16407;16408;16409;16410;16411 16357 76 LAQFEPSQR Unmodified 1074.5458 0.54580778 548 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 2 41.075 43.147 2 0.00236 9909 Miao_Sh-H9_proteinG_mass3_141226_01 95.775 52.86 6980.5 0 0 157.2 0 0 2250.5 232.3 0 0 2348.9 0 1991.6 1594 548 1568 15082;15083;15084;15085;15086;15087 16412;16413;16414;16415;16416 16414 5 LAQFIGNR Unmodified 917.5083 0.50830006 266 O00567;Q5JXT2 NOP56 Nucleolar protein 56 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 44.516 47.123 2 0.0092589 11046 Miao_Sh-H9_proteinG_mass3_141226_02 89.296 14.857 0 0 0 0 0 0 0 0 0 0 0 0 0 1595 266 1569 15088 16417 16417 1 LAQQSQALQELISELDR Unmodified 1941.0167 0.016719282 167 P19474;F5H012 TRIM21 E3 ubiquitin-protein ligase TRIM21 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 3 1 103.68 103.73 2;3 1.2414E-19 25206 Miao_Sh-H9_Flag_mass3_141226_02 134.82 106.91 7406.7 0 0 0 0 0 0 0 0 7406.7 0 0 0 1596 167 1570 15089;15090;15091;15092;15093;15094 16418;16419;16420;16421;16422;16423;16424;16425 16420 8 LAQQSQALQELISELDRR Unmodified 2097.1178 0.11783031 167 P19474;F5H012 TRIM21 E3 ubiquitin-protein ligase TRIM21 yes no 0 0 0 0 1 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 2 1 96.462 96.572 3 2.5955E-55 20424 Miao_Sh-c_Flag_mass3_141226_01 184.92 148.32 96013 18751 15207 16619 0 0 0 21713 0 23722 0 0 0 1597 167 1571 15095;15096;15097;15098;15099;15100;15101 16426;16427;16428;16429;16430;16431;16432;16433;16434;16435 16427 10 LASDLLEWIR Unmodified 1214.6659 0.66592292 283;362 O43707;O43707-2;G3V2W4;K7EJH8;P12814;P12814-2;P12814-3;P12814-4;H9KV75 ACTN4;ACTN1 Alpha-actinin-4;Alpha-actinin-1 no no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 1 1 95.832 96.684 2 5.7305E-25 22977 Miao_Sh-c_proteinG_mass3_141226_02 169.99 91.844 38445 3766.5 3980.2 3413.9 10209 8065.8 0 4134.6 0 4874.9 0 0 0 1598 283;362 1572 15102;15103;15104;15105;15106;15107;15108;15109 16436;16437;16438;16439;16440;16441;16442;16443;16444;16445 16440 10 LASSVLR Unmodified 744.44939 0.4493882 233 P84098;J3QR09;J3KTE4;J3QL15 RPL19 60S ribosomal protein L19;Ribosomal protein L19 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 1 1 1 1 1 1 1 1 36.877 38.085 2 0.024613 7151 Miao_Sh-c_proteinG_mass3_141226_03 89.142 17.004 8655 404.9 374.5 325.65 308.29 422.27 2231.5 491.86 446.91 418.84 3071.8 158.49 0 1599 233 1573 15110;15111;15112;15113;15114;15115;15116;15117;15118;15119;15120 16446 16446 1 LASTLVHLGEYQAAVDGAR Unmodified 1970.0221 0.022139011 535 Q00610;Q00610-2;J3KS13 CLTC Clathrin heavy chain 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 68.147 68.698 3 1.6875E-09 13154 Miao_Sh-H9_Flag_mass3_141226_01 102.89 77.446 22569 6087.2 0 0 0 515.54 0 7325.7 8092.5 547.86 0 0 0 1600 535 1574 15121;15122;15123;15124;15125 16447 16447 1 LASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEK Unmodified 2773.4246 0.4246366 325 P05387;H0YDD8 RPLP2 60S acidic ribosomal protein P2 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 3 2 2 1 1 2 8 2 1 59.553 60.286 3;4 1.5243E-33 9846 Miao_Sh-H9_Flag_mass3_141226_02 84.041 76.95 246340 25342 7108.2 23767 48366 16781 0 25161 24495 8722.2 66599 0 0 1601 325 1575 15126;15127;15128;15129;15130;15131;15132;15133;15134;15135;15136;15137;15138;15139;15140;15141;15142;15143;15144;15145;15146;15147;15148;15149 16448;16449;16450;16451;16452;16453;16454;16455;16456;16457;16458;16459;16460;16461;16462;16463;16464;16465;16466;16467;16468;16469;16470;16471;16472;16473;16474;16475;16476 16463 29 LASYLDK Unmodified 808.43307 0.43306943 104;432;97;102;109 P13645;CON__P13645;Q99456;CON__Q99456;P02533;CON__P02533;P19012;CON__P19012;CON__A2A4G1;P35527;CON__P35527;P08779;CON__P08779;Q04695;CON__Q04695;CON__Q9QWL7;K7EPJ9 KRT10;KRT12;KRT14;KRT15;KRT9;KRT16;KRT17 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 12;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 9;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 17 no no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 39.538 41.355 2 0.0026053 9432 Miao_Sh-H9_proteinG_mass3_141226_01 133.79 62.65 41693 0 0 0 2677.2 0 0 0 0 0 21968 444.19 16604 + 1602 104;97;432;102;109 1576 15150;15151;15152;15153 16477;16478;16479;16480;16481 16479 5 LATALQK Unmodified 743.45414 0.45413923 335;342;526;226;212 P07951-2;Q5TCU3;P07951-3;P07951;CON__Q3SX28;Q5TCU8;P67936-2;K7ERG3;K7ENT6;H0YL80;K7EP68;P09493;P09493-3;H0YL52;P09493-9;P09493-4;P09493-10;H0YKX5;H0YKP3;Q6ZN40;P09493-2;H0YNC7;F5H7S3;H7BYY1;H0YK48;B7Z596;P09493-5;P09493-8;P09493-7;P09493-6;P06753-2;Q5VU59;P06753-5;P06753-3;P06753-4;P06753-6;D6R904;Q5VU61;P67936;J3KN67;P06753 TPM2;TPM4;TPM1;TPM3 Tropomyosin beta chain;Tropomyosin alpha-4 chain;Tropomyosin alpha-1 chain;Tropomyosin alpha-3 chain no no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 1 31.779 32.902 2 0.023684 3560 Miao_Sh-H9_Flag_mass3_141226_01 78.178 24.499 1926.7 234.47 0 240.7 216.02 0 0 0 0 0 0 692.97 542.52 + 1603 342;212;335;526;226 1577 15154;15155;15156;15157;15158;15159;15160 16482;16483;16484 16483 3 LATNAAVTVLR Unmodified 1127.6663 0.66625727 469 P50990;P50990-2;P50990-3;H7C2U0 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 2 1 1 1 1 1 53.076 55.517 2 4.5925E-07 14260 Miao_Sh-H9_proteinG_mass3_141226_02 132.17 58.555 14301 0 2139.8 0 0 1366.4 1274.4 2547.4 0 851.2 6122.2 0 0 1604 469 1578 15161;15162;15163;15164;15165;15166;15167;15168;15169;15170 16485;16486;16487;16488;16489 16489 5 LATQLTGPVMPVR Unmodified 1381.7752 0.77515579 414 P26373;P26373-2 RPL13 60S ribosomal protein L13 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 3 1 1 2 2 1 2 2 3 1 2 1 65.742 65.669 2;3 3.5281E-132 10254 Miao_Sh-c_Flag_mass3_141226_01 222.74 179.06 39982 1775.2 478.7 0 8336.5 0 3520.6 6405.5 7625.4 6263.9 0 1654.4 3921.7 1605 414 1579 15171;15172;15173;15174;15175;15176;15177;15178;15179;15180;15181;15182;15183;15184;15185;15186;15187;15188;15189;15190;15191 16490;16491;16492;16493;16494;16495;16496;16497;16498;16499;16500;16501;16502;16503;16504;16505;16506;16507 16490 18 LATQLTGPVMPVR Oxidation (M) 1397.7701 0.77007041 414 P26373;P26373-2 RPL13 60S ribosomal protein L13 yes no 0 0 1 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 1 2 56.442 57.786 2 0.00010601 8382 Miao_Sh-H9_Flag_mass3_141226_03 86.405 63.719 8305.8 0 266.97 0 0 0 0 0 0 0 3875 3247 916.79 1606 414 1579 15192;15193;15194;15195;15196;15197;15198;15199;15200;15201 16508;16509;16510;16511;16512;16513;16514;16515 16511 54 8 LATQSNEITIPVTFESR Unmodified 1904.9844 0.98435652 317 P04792;C9J3N8 HSPB1 Heat shock protein beta-1 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 1 1 3 1 1 1 1 2 78.83 76.865 2;3 0.00022845 26402 Miao_Sh-H9_proteinG_mass3_141226_01 64.537 52.005 18070 0 0 3749.9 3558.4 0 0 3833.3 0 4333.7 2594.9 0 0 1607 317 1580 15202;15203;15204;15205;15206;15207;15208;15209;15210;15211;15212 16516;16517;16518;16519;16520;16521;16522;16523;16524;16525;16526;16527 16524 12 LAVEAVLR Unmodified 869.53345 0.53345218 159 P78371;F8VQ14;F5GWF6;P78371-2 CCT2 T-complex protein 1 subunit beta yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 59.102 59.553 2 0.045397 16108 Miao_Sh-H9_proteinG_mass3_141226_01 60.828 5.7167 0 0 0 0 0 0 0 0 0 0 0 0 0 1608 159 1581 15213 16528 16528 1 LAVNMVPFPR Unmodified 1142.627 0.62703499 338;530;566;315;642;564 P07437;Q5JP53;Q5ST81;Q3ZCM7;F5H0I4;Q5SQY0;I3L2F9;A6NNZ2;Q9H4B7;CON__ENSEMBL:ENSBTAP00000025008;P68371;Q9BVA1;Q13885;P04350;Q9BUF5;K7ESM5;Q13509;Q13509-2 TUBB;TUBB8;TUBB1;TUBB4B;TUBB2B;TUBB2A;TUBB4A;TUBB6;TUBB3 Tubulin beta chain;Tubulin beta-8 chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-4B chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-4A chain;Tubulin beta-6 chain;Tubulin beta-3 chain no no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching 2 2 2 1 1 1 1 2 80.297 80.061 2 7.6992E-59 14990 Miao_Sh-c_proteinG_mass3_141226_02 165.15 110.44 50588 5766.3 0 5694.1 4725.6 7215.7 0 7824.6 7995.6 10339 0 1026.9 0 1609 338;530;566;315;642;564 1582 15214;15215;15216;15217;15218;15219;15220;15221;15222;15223;15224;15225 16529;16530;16531;16532;16533;16534;16535;16536;16537;16538;16539;16540;16541;16542;16543 16536 14 LAVNMVPFPR Oxidation (M) 1158.6219 0.62194961 338;530;566;315;642;564 P07437;Q5JP53;Q5ST81;Q3ZCM7;F5H0I4;Q5SQY0;I3L2F9;A6NNZ2;Q9H4B7;CON__ENSEMBL:ENSBTAP00000025008;P68371;Q9BVA1;Q13885;P04350;Q9BUF5;K7ESM5;Q13509;Q13509-2 TUBB;TUBB8;TUBB1;TUBB4B;TUBB2B;TUBB2A;TUBB4A;TUBB6;TUBB3 Tubulin beta chain;Tubulin beta-8 chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-4B chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-4A chain;Tubulin beta-6 chain;Tubulin beta-3 chain no no 0 0 1 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 66.902 65.799 2 0.051291 11929 Miao_Sh-H9_Flag_mass3_141226_02 63.076 41.083 0 0 0 0 0 0 0 0 0 0 0 0 0 1610 338;530;566;315;642;564 1582 15226 16544 16544 1 LAYIAHPK Unmodified 911.52289 0.52288749 461 P47914 RPL29 60S ribosomal protein L29 yes yes 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 4 1 1 3 1 1 3 41.353 40.265 2 0.0082916 3780 Miao_Sh-H9_Flag_mass3_141226_01 94.262 59.156 40594 763.47 661.27 905.54 488.54 582.57 10955 617.32 780.85 22.367 9086.9 6580.4 9150 1611 461 1583 15227;15228;15229;15230;15231;15232;15233;15234;15235;15236;15237;15238;15239;15240;15241;15242;15243;15244;15245 16545;16546;16547;16548;16549;16550;16551;16552;16553;16554;16555;16556;16557;16558;16559;16560;16561;16562;16563 16554 19 LDAEPRPPPTQEAA Unmodified 1490.7365 0.73652168 56 Q9Y285;B4E363;K7ER00 FARSA Phenylalanine--tRNA ligase alpha subunit yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 42.994 44.331 2 0.038036 10465 Miao_Sh-H9_proteinG_mass3_141226_01 56.569 42.334 1742.5 0 120.34 0 0 0 0 0 0 0 1197.6 424.57 0 1612 56 1584 15246;15247;15248 16564 16564 0 LDALTELLSTALGPR Unmodified 1568.8774 0.87737225 253 O15554;M0QZ70;M0R1J0 KCNN4 Intermediate conductance calcium-activated potassium channel protein 4 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 2 117.45 110.48 2;3 0.00044757 27687 Miao_Sh-H9_Flag_mass3_141226_01 71.279 46.584 2363.4 0 0 0 0 0 1361.3 1002.1 0 0 0 0 0 1613 253 1585 15249;15250;15251 16565;16566;16567 16567 3 LDAQVQELHAK Unmodified 1250.6619 0.66190017 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 1 38.782 40.587 3 0.0049128 8081 Miao_Sh-c_proteinG_mass3_141226_03 66.267 50.886 7244.3 46.032 173.95 0 329.91 0 3438.1 0 0 0 2685.8 570.55 0 1614 434 1586 15252;15253;15254;15255;15256;15257 16568;16569 16568 2 LDEIYVAGLVAHSDLDER Unmodified 2014.0007 0.0007348666 286 O60506-4;O60506-3;O60506;O60506-2;F6UXX1 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 3 2 1 109.12 98.449 3 2.264E-14 34944 Miao_Sh-H9_proteinG_mass3_141226_01 102.89 74.612 0 0 0 0 0 0 0 0 0 0 0 0 0 1615 286 1587 15258;15259;15260;15261;15262;15263;15264;15265 16570;16571;16572;16573;16574;16575;16576;16577 16573 8 LDELYGTWR Unmodified 1151.5611 0.56112349 438 P36578;H3BM89 RPL4 60S ribosomal protein L4 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 1 70.175 69.483 2 3.7828E-05 12090 Miao_Sh-c_proteinG_mass3_141226_02 129.85 87.253 6443.7 680.25 786.35 0 613.05 3344.3 0 0 0 0 0 1019.8 0 1616 438 1588 15266;15267;15268;15269;15270;15271 16578;16579 16579 2 LDFDGLPSGIGK Unmodified 1217.6292 0.62920306 556 Q13045;Q13045-2;Q13045-3;J3QQQ2;J3KS54 FLII Protein flightless-1 homolog yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 92.279 83.256 2 0.021543 28140 Miao_Sh-H9_proteinG_mass3_141226_02 53.034 36.494 0 0 0 0 0 0 0 0 0 0 0 0 0 1617 556 1589 15272 16580 16580 1 LDFLEGDQK Unmodified 1063.5186 0.51858998 222 Q99848;H7C2Q8 EBNA1BP2 Probable rRNA-processing protein EBP2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 55.818 58.925 2 0.011686 14250 Miao_Sh-c_proteinG_mass3_141226_03 77.662 37.311 0 0 0 0 0 0 0 0 0 0 0 0 0 1618 222 1590 15273;15274 16581;16582 16581 2 LDGETTDLQDQIAELQAQIDELK Unmodified 2585.2708 0.2708213 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 117.18 105 3 2.4603E-10 38082 Miao_Sh-H9_proteinG_mass3_141226_01 69.704 51.351 0 0 0 0 0 0 0 0 0 0 0 0 0 1619 434 1591 15275 16583 16583 1 LDGLVETPTGYIESLPR Unmodified 1858.9676 0.96764382 22 P55209;H0YHC3;F8W020;F8W118;F8VXI6;F8VUX1;F8VY35;B3KV44;F8VV59;B7Z9C2;F8W0J6;F5H4R6;H0YIV4;P55209-2;F8VRJ2 NAP1L1 Nucleosome assembly protein 1-like 1 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 2 1 1 92.423 87.745 3 0.014871 19406 Miao_Sh-H9_Flag_mass3_141226_03 42.059 30.8 7100.4 1151.5 1133.1 1097.5 0 0 0 0 0 1519.2 1124.1 0 1074.9 1620 22 1592 15276;15277;15278;15279;15280;15281;15282 16584;16585 16585 2 LDHYAIIK Unmodified 971.54402 0.54401687 9 P62750;H7BY10;K7EJV9;K7ERT8;A8MUS3 RPL23A 60S ribosomal protein L23a yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 2 3 2 1 2 4 3 2 63.265 61.074 2 5.1283E-07 4693 Miao_Sh-c_Flag_mass3_141226_02 127.02 47.553 19792 723.12 0 0 480.35 984.43 3026.7 1183.1 1108.8 1141.5 3166.9 2966.1 5011.5 1621 9 1593 15283;15284;15285;15286;15287;15288;15289;15290;15291;15292;15293;15294;15295;15296;15297;15298;15299;15300;15301;15302;15303;15304;15305;15306 16586;16587;16588;16589;16590;16591;16592;16593;16594;16595;16596;16597;16598;16599;16600;16601;16602;16603;16604;16605;16606 16587 20 LDIDSPPITAR Unmodified 1196.6401 0.6401021 368 P14618;P14618-2;H3BTN5;H3BQ34;H3BT25;H3BUW1;H3BTJ2;H3BU13;H3BN34;H3BQZ3 PKM Pyruvate kinase PKM;Pyruvate kinase yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 1 2 1 1 1 2 1 1 1 58.007 59.268 2;3 1.0705E-30 9298 Miao_Sh-H9_Flag_mass3_141226_01 176.78 98.26 122340 5114.7 6830.2 5939 4420.7 1056.6 17296 12038 15841 0 16496 21056 16250 1622 368 1594 15307;15308;15309;15310;15311;15312;15313;15314;15315;15316;15317;15318;15319;15320 16607;16608;16609;16610;16611;16612;16613;16614;16615;16616;16617;16618;16619;16620;16621;16622;16623;16624;16625;16626;16627;16628;16629;16630;16631;16632;16633 16621 27 LDIVFYLLR Unmodified 1150.675 0.67503104 69 Q15008;C9IZE4;E9PHI9;Q15008-2;C9J0E9 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 1 1 108.51 105.91 2 0.0022166 23834 Miao_Sh-c_Flag_mass3_141226_01 106.68 72.761 16328 2287.4 1935.8 2038.6 0 0 0 2422.8 2031.3 1981.5 2020.7 1610.4 0 1623 69 1595 15321;15322;15323;15324;15325;15326;15327;15328 16634;16635;16636;16637;16638;16639;16640;16641;16642 16635 9 LDLGEDYPSGK Unmodified 1192.5612 0.56118307 279 O43143 DHX15 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 49.431 53.892 2 0.013292 12212 Miao_Sh-c_proteinG_mass3_141226_03 66.267 38.062 2357.5 0 0 0 0 0 1184.6 0 0 0 0 0 1173 1624 279 1596 15329;15330 16643 16643 1 LDNYDAPDIANIAISNELFEEAFAIFR Unmodified 3070.4924 0.49238181 535 Q00610;Q00610-2 CLTC Clathrin heavy chain 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 2 122.03 122.49 3 5.0575E-08 33686 Miao_Sh-c_proteinG_mass3_141226_01 54.167 46.88 8305.3 0 0 0 2907 0 0 0 0 5398.3 0 0 0 1625 535 1597 15331;15332;15333 16644;16645 16644 2 LDPGSEETQTLVR Unmodified 1443.7205 0.72053726 417 P26641;B4DTG2 EEF1G Elongation factor 1-gamma yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 51.672 52.524 2 0.0053126 13205 Miao_Sh-H9_proteinG_mass3_141226_01 64.313 36.108 8397 0 0 339.09 0 0 0 0 2056.2 2617.5 1751.3 0 1632.9 1626 417 1598 15334;15335;15336;15337;15338;15339 16646;16647;16648;16649;16650 16648 5 LDPHLVLDQLR Unmodified 1317.7405 0.74048484 433;434 P35579;P35579-2;P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH9;MYH10 Myosin-9;Myosin-10 no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 3 1 2 4 1 1 1 3 15 11 84.952 78.519 2;3 9.5697E-40 34646 Miao_Sh-H9_proteinG_mass3_141226_02 182.92 145.22 312730 0 13920 12975 14043 32651 67786 13318 14734 14443 70007 25097 33761 1627 433;434 1599 15340;15341;15342;15343;15344;15345;15346;15347;15348;15349;15350;15351;15352;15353;15354;15355;15356;15357;15358;15359;15360;15361;15362;15363;15364;15365;15366;15367;15368;15369;15370;15371;15372;15373;15374;15375;15376;15377;15378;15379;15380;15381;15382;15383;15384;15385;15386 16651;16652;16653;16654;16655;16656;16657;16658;16659;16660;16661;16662;16663;16664;16665;16666;16667;16668;16669;16670;16671;16672;16673;16674;16675;16676;16677;16678;16679;16680;16681;16682;16683;16684;16685;16686;16687;16688;16689;16690;16691;16692;16693;16694;16695;16696;16697;16698;16699;16700;16701;16702;16703;16704;16705;16706;16707;16708;16709;16710;16711;16712;16713;16714;16715;16716;16717;16718;16719;16720;16721;16722;16723;16724;16725;16726;16727;16728;16729;16730;16731;16732;16733;16734;16735;16736;16737;16738;16739;16740;16741 16705 91 LDPSIFESLQK Unmodified 1275.6711 0.67106787 672 Q9Y265;Q9Y265-2;E7ETR0 RUVBL1 RuvB-like 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 78.472 78.322 2 0.049082 16454 Miao_Sh-H9_Flag_mass3_141226_03 45.891 27.701 0 0 0 0 0 0 0 0 0 0 0 0 0 1628 672 1600 15387 16742 16742 1 LDPSPLR Unmodified 796.4443 0.44430282 60 Q53GT1;B7Z2G1;C9J191 KLHL22 Kelch-like protein 22 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 40.888 41.74 2 0.027392 9504 Miao_Sh-H9_proteinG_mass3_141226_01 85.265 6.6494 1039 0 0 0 0 0 0 0 0 0 1039 0 0 1629 60 1601 15388 16743 16743 1 LDQLIYIPLPDEK Unmodified 1555.8498 0.84976052 483 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 2 2 2 1 2 3 2 2 1 1 90.8 90.082 2;3 3.3014E-25 20713 Miao_Sh-H9_Flag_mass3_141226_02 167.92 90.243 133360 17325 14767 13392 792.36 0 0 33275 27417 25890 498.97 0 0 1630 483 1602 15389;15390;15391;15392;15393;15394;15395;15396;15397;15398;15399;15400;15401;15402;15403;15404;15405;15406 16744;16745;16746;16747;16748;16749;16750;16751;16752;16753;16754;16755;16756;16757;16758;16759;16760;16761;16762;16763;16764;16765;16766;16767;16768;16769;16770;16771;16772;16773;16774;16775;16776;16777;16778;16779;16780;16781;16782;16783;16784;16785;16786;16787;16788;16789 16772 46 LDSSPSVSSTLAAK Unmodified 1361.7038 0.70382456 134 Q13428;Q13428-6;Q13428-3;J3KQ96;E7ETY2;E9PHK9;Q13428-2;Q13428-8;Q13428-7;Q13428-4 TCOF1 Treacle protein yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 2 1 1 48.519 49.522 2 2.5608E-05 11033 Miao_Sh-H9_proteinG_mass3_141226_03 101.61 58.525 5142.1 227.5 0 0 156 0 0 276.9 0 0 0 4481.7 0 1631 134 1603 15407;15408;15409;15410;15411;15412 16790;16791;16792;16793 16793 4 LDVQFSGLTK Unmodified 1106.5972 0.59717465 392 P21333;Q5HY54;P21333-2 FLNA Filamin-A yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 65.965 66.315 2 0.028305 18774 Miao_Sh-H9_proteinG_mass3_141226_01 59.84 13.888 0 0 0 0 0 0 0 0 0 0 0 0 0 1632 392 1604 15413 16794 16794 1 LDVTLGPVPEIGGSEAPAPQNK Unmodified 2188.1376 0.1375627 222 Q99848;H7C2Q8 EBNA1BP2 Probable rRNA-processing protein EBP2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 84.521 72.341 3 5.627E-09 25405 Miao_Sh-H9_proteinG_mass3_141226_01 73.091 56.166 0 0 0 0 0 0 0 0 0 0 0 0 0 1633 222 1605 15414 16795 16795 1 LDVTSVEDYK Unmodified 1167.5659 0.5659341 66 P48643;E7ENZ3;B7ZAR1;E9PCA1;P48643-2 CCT5 T-complex protein 1 subunit epsilon yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 58.551 58.802 2 0.025139 9365 Miao_Sh-H9_Flag_mass3_141226_03 61.815 32.072 0 0 0 0 0 0 0 0 0 0 0 0 0 1634 66 1606 15415 16796 16796 1 LDYILGLK Unmodified 933.55352 0.55351892 459 P46781;B5MCT8;C9JM19 RPS9 40S ribosomal protein S9 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 2 2 77.588 75.799 2 0.0029992 14358 Miao_Sh-c_proteinG_mass3_141226_02 113.71 58.176 29302 0 1377.9 0 5768.9 4882.1 2704.5 3464 2120.3 0 5129 0 3855.2 1635 459 1607 15416;15417;15418;15419;15420;15421;15422;15423;15424;15425 16797;16798;16799;16800;16801;16802;16803;16804 16799 8 LEAAAQVR Unmodified 856.47667 0.47666558 149 P55786;E9PLK3;B7Z463;A6NEC2;E9PP11;E5RJ24;E7EWZ2;I3L083;E9PJY4;E9PPD4;H0YAQ6;A6NEC2-3;E9PJF9;E9PPZ2 NPEPPS;NPEPPSL1 Puromycin-sensitive aminopeptidase;Puromycin-sensitive aminopeptidase-like protein yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 32.678 32.54 2 0.029104 3069 Miao_Sh-H9_Flag_mass3_141226_02 75.043 16.062 491.34 101.73 0 54.236 0 0 0 167.13 168.24 0 0 0 0 1636 149 1608 15426;15427;15428;15429 16805 16805 1 LEAEIATYR Unmodified 1064.5502 0.55022446 178 P05783;F8VZY9 KRT18 Keratin, type I cytoskeletal 18 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 49.468 52.563 2 2.9735E-07 12815 Miao_Sh-H9_proteinG_mass3_141226_01 144.77 73.269 9314.1 0 0 0 0 0 1219.5 0 0 0 3903.1 890.03 3301.5 1637 178 1609 15430;15431;15432;15433;15434 16806;16807;16808 16807 3 LEALDANSR Unmodified 987.49852 0.49852324 348 P09496-2;P09496;F8WF69;P09496-4;P09496-3 CLTA Clathrin light chain A yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 38.514 38.965 2 0.029533 3749 Miao_Sh-c_Flag_mass3_141226_02 66.056 13.34 784.86 0 227.04 221.9 108.18 0 0 0 227.74 0 0 0 0 1638 348 1610 15435;15436;15437;15438;15439 16809;16810;16811 16809 3 LEAPLEELR Unmodified 1068.5815 0.58152458 586 Q16401;F2Z3J2;Q16401-2 PSMD5 26S proteasome non-ATPase regulatory subunit 5 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching 2 1 1 2 1 2 66.344 66.946 2 0.016578 12046 Miao_Sh-H9_Flag_mass3_141226_03 72.275 30.399 6568.4 0 1025.9 700.75 0 702.34 0 2104.8 0 967.47 1067.1 0 0 1639 586 1611 15440;15441;15442;15443;15444;15445;15446;15447;15448 16812;16813 16813 2 LEATINELV Unmodified 1000.5441 0.54407645 353 P10599;P10599-2 TXN Thioredoxin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching 1 1 2 68.814 68.279 2 0.0023561 21399 Miao_Sh-c_proteinG_mass3_141226_03 108.74 79.573 2200 0 0 0 0 0 1191.1 0 0 0 704.86 304.03 0 1640 353 1612 15449;15450;15451;15452 16814;16815;16816 16814 3 LEDLIVK Unmodified 828.49567 0.49566969 406 P24752;H0YEL7 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 51.222 52.766 2 0.052605 13579 Miao_Sh-H9_proteinG_mass3_141226_01 70.67 28.441 18244 1117.9 0 882.16 0 0 0 0 0 0 6502.9 5584.7 4156.2 1641 406 1613 15453;15454;15455;15456;15457 16817 16817 1 LEDVLPLAFTR Unmodified 1272.7078 0.70778773 593 Q5SSJ5;X6RGJ2;Q5SWC8;Q5SSJ5-2;B0QZK4;Q5SSJ5-3 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 2 1 2 1 1 2 1 1 1 95.528 91.832 2 0.0029145 18719 Miao_Sh-c_proteinG_mass3_141226_02 83.081 61.054 14334 0 0 1633.3 0 0 1482.7 2905.7 3278.2 2264.2 0 0 2770.4 1642 593 1614 15458;15459;15460;15461;15462;15463;15464;15465;15466;15467;15468;15469;15470 16818;16819;16820;16821;16822;16823;16824;16825;16826;16827;16828 16821 11 LEGDSTDLSDQIAELQAQIAELK Unmodified 2486.2388 0.23879289 433 P35579 MYH9 Myosin-9 yes yes 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 2 1 1 1 1 1 1 106.09 105.31 3 1.6324E-23 37886 Miao_Sh-H9_proteinG_mass3_141226_01 118.76 108.61 23981 918.34 0 2818.1 0 6633.3 0 0 4527.4 1239.7 7844 0 0 1643 433 1615 15471;15472;15473;15474;15475;15476;15477;15478;15479 16829;16830;16831;16832;16833 16832 5 LEGGSGGDSEVQR Unmodified 1289.5848 0.58477206 498 P62195;P62195-2;J3QQM1 PSMC5 26S protease regulatory subunit 8 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 2 1 1 2 1 31.368 31.458 2 0.00034583 2838 Miao_Sh-H9_Flag_mass3_141226_02 89.26 58.436 502.06 0 109.68 73.442 0 0 0 99.147 135.33 0 84.459 0 0 1644 498 1616 15480;15481;15482;15483;15484;15485;15486 16834;16835;16836 16835 3 LEGLEDALQK Unmodified 1114.587 0.58700389 98 P02538;CON__P02538;P48668;CON__P04259;CON__P48668 KRT6A;KRT6C Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C no no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 56.349 58.375 2 1.6557E-43 15764 Miao_Sh-H9_proteinG_mass3_141226_02 190.57 106.58 36278 0 651.59 277.92 247.56 0 10048 0 0 0 1269.3 12071 11712 + 1645 98 1617 15487;15488;15489;15490;15491;15492;15493 16837;16838;16839 16838 3 LEGLTDEINFLR Unmodified 1418.7405 0.74054442 100 P05787;CON__P05787;P05787-2;CON__H-INV:HIT000292931;F8VUG2;F8W1U3;F8VP67;H0YIB2 KRT8 Keratin, type II cytoskeletal 8 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 88.069 90.074 2 0.00046596 19835 Miao_Sh-c_proteinG_mass3_141226_01 104.59 49.611 10114 949.52 0 0 4142.9 5021.2 0 0 0 0 0 0 0 + 1646 100 1618 15494;15495;15496;15497;15498 16840;16841;16842;16843;16844 16840 5 LEGQVLR Unmodified 813.47085 0.47085192 10 Q9Y608;Q9Y608-2;A8MXR0;Q9Y608-4;Q9Y608-3 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 38.612 37.71 2 0.029923 3661 Miao_Sh-H9_Flag_mass3_141226_02 74.415 11.701 0 0 0 0 0 0 0 0 0 0 0 0 0 1647 10 1619 15499 16845 16845 1 LEILQIHTK Unmodified 1093.6495 0.64954457 483 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 2 1 1 57.116 57.227 2;3 3.0873E-06 7520 Miao_Sh-c_Flag_mass3_141226_01 131.62 77.459 12220 1441.4 0 0 362.41 0 0 2748.5 3613.3 4054.9 0 0 0 1648 483 1620 15500;15501;15502;15503;15504;15505 16846;16847;16848;16849;16850;16851;16852;16853;16854;16855 16846 10 LELAQYR Unmodified 891.48142 0.48141661 410 P25705;P25705-2;P25705-3 ATP5A1 ATP synthase subunit alpha, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 44.387 50.553 2 0.042962 11060 Miao_Sh-c_proteinG_mass3_141226_03 68.915 31.357 0 0 0 0 0 0 0 0 0 0 0 0 0 1649 410 1621 15506 16856 16856 1 LELGNDWDSATK Unmodified 1347.6307 0.63065962 664 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 1 61.627 63.281 2 2.008E-06 15741 Miao_Sh-c_proteinG_mass3_141226_03 133.88 80.28 21961 421.2 1497.8 0 0 0 4128.8 0 885.19 0 3425.5 7288.2 4314.7 1650 664 1622 15507;15508;15509;15510;15511;15512;15513;15514 16857;16858;16859;16860;16861;16862;16863;16864;16865;16866 16858 10 LELQGPR Unmodified 811.4552 0.45520186 389 P19338;H7BY16 NCL Nucleolin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 2 35.445 41.51 2 0.0029091 8222 Miao_Sh-c_proteinG_mass3_141226_03 113.89 44.506 0 0 0 0 0 0 0 0 0 0 0 0 0 1651 389 1623 15515;15516 16867;16868 16868 2 LELSVHLQPITR Unmodified 1404.8089 0.80889876 295 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 68.592 68.718 3 0.032622 11348 Miao_Sh-c_Flag_mass3_141226_01 42.031 28.63 1178.1 730.99 447.14 0 0 0 0 0 0 0 0 0 0 1652 295 1624 15517;15518 16869 16869 1 LENEIQTYR Unmodified 1164.5775 0.57750184 104 P13645;CON__P13645;CON__P02535-1 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS 2 1 1 1 1 1 1 1 43.846 45.5 2 6.864E-15 10173 Miao_Sh-H9_proteinG_mass3_141226_03 164.97 112.29 15566 299.45 93.136 538.78 169.79 0 753.34 0 0 1153.2 0 6514.9 6043.2 + 1653 104 1625 15519;15520;15521;15522;15523;15524;15525;15526;15527 16870;16871 16871 2 LENVSVALEFLER Unmodified 1517.809 0.80895834 570 Q14315;Q14315-2 FLNC Filamin-C yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching 1 1 107.13 100.94 2 0.016237 23439 Miao_Sh-H9_Flag_mass3_141226_02 52.527 40.291 0 0 0 0 0 0 0 0 0 0 0 0 0 1654 570 1626 15528;15529 16872;16873 16872 2 LEQEIATYR Unmodified 1121.5717 0.57168818 97;102;109 P02533;CON__P02533;P19012;CON__P19012;CON__A2A4G1;CON__Q9Z2K1;CON__Q3ZAW8;CON__Q61782;A8MT21;B3KRA2;P35900;CON__P35900;CON__Q9D312;Q8N1A0;CON__Q8N1A0;Q8N1A0-2;P08779;CON__P08779;Q04695;CON__Q04695;CON__Q9QWL7;F5GWP8 KRT14;KRT15;KRT20;KRT222;KRT16;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 20;Keratin-like protein KRT222;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 17 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 45.081 47.399 2 2.12E-21 11263 Miao_Sh-H9_proteinG_mass3_141226_01 175.65 97.723 16208 0 0 0 86.412 266.24 0 0 0 0 9581.2 6274.5 0 + 1655 97;102;109 1627 15530;15531;15532;15533 16874;16875 16874 2 LEQVSSDEGIGTLAENLLEALR Unmodified 2356.2122 0.21218421 594 Q5T4S7;Q5T4S7-3;Q5T4S7-4;Q5T4S7-2;B4DPF6;B4DYV5;X6R960 UBR4 E3 ubiquitin-protein ligase UBR4 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 117.43 117.17 3 2.6212E-09 29228 Miao_Sh-H9_Flag_mass3_141226_01 75.054 61.446 0 0 0 0 0 0 0 0 0 0 0 0 0 1656 594 1628 15534 16876 16876 1 LESEEEGVPSTAIR Unmodified 1515.7417 0.74166663 330 P06493;E5RIU6;P06493-2 CDK1 Cyclin-dependent kinase 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 48.396 49.925 2 0.0061104 12434 Miao_Sh-H9_proteinG_mass3_141226_01 57.796 36.424 1872.4 27.043 0 0 0 0 0 0 0 0 0 0 1845.3 1657 330 1629 15535;15536;15537;15538;15539 16877;16878;16879;16880 16878 4 LETGAPRPPATVTNAVSWR Unmodified 2022.0647 0.064672527 25 Q9BXS5;K7EJL1;B4DDG7;E7ENJ6;Q9BXS5-2 AP1M1 AP-1 complex subunit mu-1 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 63.057 65.363 3 1.1677E-05 17929 Miao_Sh-H9_proteinG_mass3_141226_02 66.606 49.61 0 0 0 0 0 0 0 0 0 0 0 0 0 1658 25 1630 15540 16881 16881 1 LETVGSIFSR Unmodified 1107.5924 0.59242362 236 Q9Y3D9;J3QLR8 MRPS23 28S ribosomal protein S23, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 2 65.913 68.188 2 0.0050447 19814 Miao_Sh-H9_proteinG_mass3_141226_01 97.472 56.59 5315.3 1643.3 0 317.62 0 1028.8 1236.6 0 0 0 1089 0 0 1659 236 1631 15541;15542;15543;15544;15545;15546 16882;16883 16883 2 LEVELALK Unmodified 913.54843 0.54843354 615 Q8TDY2;Q8TDY2-2 RB1CC1 RB1-inducible coiled-coil protein 1 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 3 1 1 1 2 2 68.999 65.396 2 0.0042811 11362 Miao_Sh-H9_Flag_mass3_141226_03 107.69 37.789 19304 3690.4 1676.4 0 0 0 1613.7 5770.5 0 5091.7 1460.9 0 0 1660 615 1632 15547;15548;15549;15550;15551;15552;15553;15554;15555;15556;15557;15558 16884;16885;16886;16887;16888;16889;16890;16891;16892;16893;16894 16894 11 LEVSDDLENVCNWVVDTCLHK Unmodified 2544.1625 0.1624736 297;296 O75688-2;C9JIR6;O75688-4;O75688-5;O75688 PPM1B Protein phosphatase 1B no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 100.41 100.36 3 9.4162E-10 24129 Miao_Sh-H9_Flag_mass3_141226_03 76.492 66.58 0 0 0 0 0 0 0 0 0 0 0 0 0 1661 297;296 1633 15559 16895 16895 1 LFACGIGSTANR Unmodified 1265.6187 0.61865515 664 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 50.094 53.051 2 0.0028654 12590 Miao_Sh-H9_proteinG_mass3_141226_03 72.29 32.022 0 0 0 0 0 0 0 0 0 0 0 0 0 1662 664 1634 15560 16896 16896 1 LFAQLAGEDAEISAFELQTILR Unmodified 2434.2744 0.27439053 385 P17655;P17655-2 CAPN2 Calpain-2 catalytic subunit yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 1 117.45 114.11 3 7.7399E-10 27081 Miao_Sh-c_Flag_mass3_141226_03 74.364 67.761 14053 4764.7 0 3898.4 0 0 0 1043.8 0 4312.2 0 0 34.252 1663 385 1635 15561;15562;15563;15564;15565;15566;15567 16897;16898;16899 16898 3 LFDHPESPTPNPTEPLFLAQAEVYK Unmodified 2839.4069 0.40686127 464 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 90.643 90.167 3 2.1264E-05 19551 Miao_Sh-H9_Flag_mass3_141226_01 54.521 46.012 0 0 0 0 0 0 0 0 0 0 0 0 0 1664 464 1636 15568;15569 16900;16901 16900 2 LFDQAFGLPR Unmodified 1162.6135 0.61349341 317 P04792;F8WE04 HSPB1 Heat shock protein beta-1 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 3 3 3 4 2 2 4 2 83.132 78.736 2 2.1621E-09 14173 Miao_Sh-c_Flag_mass3_141226_01 140.78 85.338 43221 6227.3 0 514.02 8386.4 0 1971.7 0 8297 6493.6 4519 4066.9 2744.6 1665 317 1637 15570;15571;15572;15573;15574;15575;15576;15577;15578;15579;15580;15581;15582;15583;15584;15585;15586;15587;15588;15589;15590;15591;15592;15593 16902;16903;16904;16905;16906;16907;16908;16909;16910;16911;16912;16913;16914 16902 13 LFEFAGYDVLR Unmodified 1328.6765 0.6764876 480 P54136;P54136-2;F5H3T8 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 94.419 92.64 2 0.0109 20940 Miao_Sh-c_proteinG_mass3_141226_01 69.864 47.177 12715 0 0 394.87 3094.3 0 0 5252 0 0 0 3974.1 0 1666 480 1638 15594;15595;15596;15597 16915 16915 1 LFEGNALLR Unmodified 1031.5764 0.57637963 459 P46781;B5MCT8;C9JM19 RPS9 40S ribosomal protein S9 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 1 4 3 2 1 2 4 7 72.935 71.376 2 8.6945E-22 11438 Miao_Sh-c_proteinG_mass3_141226_02 177.91 102.09 155470 6216.9 840.43 5973 18704 16610 21530 10430 12205 11269 27458 12581 11656 1667 459 1639 15598;15599;15600;15601;15602;15603;15604;15605;15606;15607;15608;15609;15610;15611;15612;15613;15614;15615;15616;15617;15618;15619;15620;15621;15622;15623;15624;15625;15626;15627 16916;16917;16918;16919;16920;16921;16922;16923;16924;16925;16926;16927;16928;16929;16930;16931;16932;16933;16934;16935;16936;16937;16938;16939;16940;16941;16942;16943;16944;16945;16946;16947;16948;16949;16950;16951;16952;16953;16954;16955;16956;16957;16958;16959 16924 44 LFEISDIVIK Unmodified 1175.6802 0.680176 653 Q9NSD9;F5H6Y1 FARSB Phenylalanine--tRNA ligase beta subunit yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 90.426 89.674 2 0.049322 19558 Miao_Sh-H9_Flag_mass3_141226_01 55.353 8.9822 1247.9 0 0 0 0 0 0 1247.9 0 0 0 0 0 1668 653 1640 15628 16960 16960 1 LFEMAYK Oxidation (M) 916.43644 0.43644025 441 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 1 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 45.938 48.232 2 0.039536 9797 Miao_Sh-c_proteinG_mass3_141226_03 71.296 34.137 6061 117.42 0 0 0 0 3388.5 0 0 370.17 0 0 2184.9 1669 441 1641 15629;15630;15631;15632;15633 16961;16962;16963 16961 3 LFEQNVQR Unmodified 1032.5352 0.53524309 491 P61081;M0QX69 UBE2M NEDD8-conjugating enzyme Ubc12 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 35.102 41.167 2 0.024819 8036 Miao_Sh-c_proteinG_mass3_141226_03 70.525 20.398 0 0 0 0 0 0 0 0 0 0 0 0 0 1670 491 1642 15634 16964 16964 1 LFFLQVK Unmodified 893.53747 0.53747492 412 P26038 MSN Moesin no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 113.21 98.522 2 0.0278 17490 Miao_Sh-H9_Flag_mass3_141226_02 75.311 40.205 4369.3 0 0 0 0 0 0 0 0 0 2522.4 0 1846.8 1671 412 1643 15635;15636;15637 16965;16966;16967 16965 3 LFIGGLNTETNEK Unmodified 1434.7355 0.73545904 201 P38159;H0Y6E7;H3BT71;P38159-2;Q96E39;H3BR27;P38159-3;H3BNC1 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS 1 1 2 1 63.44 64.656 2 1.9286E-13 11032 Miao_Sh-c_proteinG_mass3_141226_01 150.14 84.677 17580 0 0 1854.1 4328.3 0 0 3956.1 0 0 0 0 7441.6 1672 201 1644 15638;15639;15640;15641;15642 16968;16969;16970;16971;16972;16973;16974;16975;16976;16977 16973 10 LFIGGLNVQTSESGLR Unmodified 1689.905 0.90498399 558 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 2 89.757 82.706 2 0.002115 17147 Miao_Sh-H9_Flag_mass3_141226_02 60.307 38.911 3214.6 0 0 0 516.99 0 1973.4 0 0 0 0 724.2 0 1673 558 1645 15643;15644;15645;15646;15647 16978;16979;16980 16979 2 LFIGGLPNYLNDDQVK Unmodified 1804.9359 0.93594977 413 P26368;P26368-2;K7ENG2 U2AF2 Splicing factor U2AF 65 kDa subunit yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 2 1 108.89 95.038 2;3 0.001417 34239 Miao_Sh-H9_proteinG_mass3_141226_01 63.462 29.198 0 0 0 0 0 0 0 0 0 0 0 0 0 1674 413 1646 15648;15649;15650 16981;16982;16983 16981 3 LFIGGLSFETTDDSLR Unmodified 1769.8836 0.88357984 470 P51991;P51991-2 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 4 4 1 2 2 2 6 4 102.87 96.912 2;3 5.2182E-39 36573 Miao_Sh-H9_proteinG_mass3_141226_03 173.03 126.15 74785 0 0 704.83 14125 2311.9 0 0 1284.9 2451.7 23832 13138 16936 1675 470 1647 15651;15652;15653;15654;15655;15656;15657;15658;15659;15660;15661;15662;15663;15664;15665;15666;15667;15668;15669;15670;15671;15672;15673;15674;15675;15676;15677 16984;16985;16986;16987;16988;16989;16990;16991;16992;16993;16994;16995;16996;16997;16998;16999;17000;17001;17002;17003;17004;17005;17006;17007;17008;17009 17007 26 LFIGGLSFETTDDSLREHFEK Unmodified 2440.1911 0.19105483 470 P51991;P51991-2 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 115.52 104.92 4 1.088E-05 37468 Miao_Sh-H9_proteinG_mass3_141226_01 69.361 52.437 8002.7 0 0 0 0 0 0 0 0 0 6111.3 1891.3 0 1676 470 1648 15678;15679 17010;17011 17011 2 LFIGGLSFETTDESLR Unmodified 1783.8992 0.89922991 180 P09651;F8W6I7;P09651-3;P09651-2;F8VZ49;Q32P51;F8VTQ5;F8W646 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 2 2 3 4 2 2 2 3 2 2 3 99.328 95.434 2;3 1.5283E-50 35612 Miao_Sh-H9_proteinG_mass3_141226_01 184.87 151.86 298550 3576.3 4126.1 777.86 66731 13303 13209 5537.5 0 8207.9 82011 53767 47304 1677 180 1649 15680;15681;15682;15683;15684;15685;15686;15687;15688;15689;15690;15691;15692;15693;15694;15695;15696;15697;15698;15699;15700;15701;15702;15703;15704;15705;15706 17012;17013;17014;17015;17016;17017;17018;17019;17020;17021;17022;17023;17024;17025;17026;17027;17028;17029;17030;17031;17032;17033;17034;17035;17036;17037;17038;17039;17040;17041;17042 17031 28 LFIGGLSFETTEESLR Unmodified 1797.9149 0.91487997 397 P22626;P22626-2 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 2 3 2 4 1 3 5 5 104.91 97.733 2;3 4.0261E-50 37005 Miao_Sh-H9_proteinG_mass3_141226_03 184.98 149.53 210380 0 0 0 44174 7009.3 13444 3811.6 599.28 0 52308 43272 45760 1678 397 1650 15707;15708;15709;15710;15711;15712;15713;15714;15715;15716;15717;15718;15719;15720;15721;15722;15723;15724;15725;15726;15727;15728;15729;15730;15731 17043;17044;17045;17046;17047;17048;17049;17050;17051;17052;17053;17054;17055;17056;17057;17058;17059;17060;17061;17062;17063;17064;17065;17066;17067;17068;17069;17070;17071;17072;17073;17074;17075;17076;17077 17062 34 LFMVLWLK Unmodified 1048.6143 0.61434504 263 O00299 CLIC1 Chloride intracellular channel protein 1 yes yes 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 103.17 103.67 2 0.056101 22311 Miao_Sh-c_Flag_mass3_141226_03 62.659 23.883 2650.3 0 0 1148.8 0 0 0 0 1501.5 0 0 0 0 1679 263 1651 15732;15733 17078 17078 1 LFPDTPLALDANK Unmodified 1413.7504 0.75038083 553 Q12906;Q12906-4;Q12906-5;Q12906-2;Q12906-6;Q12906-3;Q12906-7 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 2 1 1 3 81.411 72.924 2 7.0418E-05 15851 Miao_Sh-H9_Flag_mass3_141226_03 92.295 54.019 14957 0 0 0 0 0 5247.3 0 0 0 4837.5 4872.5 0 1680 553 1652 15734;15735;15736;15737;15738;15739;15740;15741;15742;15743;15744;15745;15746 17079;17080;17081;17082;17083;17084;17085;17086;17087;17088;17089;17090;17091;17092;17093;17094 17086 16 LFQVEYAIEAIK Unmodified 1422.7759 0.7758673 419 P28066 PSMA5 Proteasome subunit alpha type-5 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 98.043 93.307 2 0.0056154 21064 Miao_Sh-H9_Flag_mass3_141226_03 71.558 47.527 5546.4 0 0 0 0 0 0 0 0 4363.6 0 1182.8 0 1681 419 1653 15747;15748 17095 17095 1 LFSVPDFVGDACK Unmodified 1453.6912 0.69115139 573 Q14764 MVP Major vault protein yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 2 1 4 3 2 2 2 3 4 9 5 3 93.765 90.221 2;3 2.9914E-13 33549 Miao_Sh-H9_proteinG_mass3_141226_02 136.3 90.47 258120 1691.3 513.28 4628.5 31383 32064 22243 880.33 2796.5 8585.2 101380 32810 19148 1682 573 1654 15749;15750;15751;15752;15753;15754;15755;15756;15757;15758;15759;15760;15761;15762;15763;15764;15765;15766;15767;15768;15769;15770;15771;15772;15773;15774;15775;15776;15777;15778;15779;15780;15781;15782;15783;15784;15785;15786;15787;15788 17096;17097;17098;17099;17100;17101;17102;17103;17104;17105;17106;17107;17108;17109;17110;17111;17112;17113;17114;17115;17116;17117;17118;17119;17120;17121;17122;17123;17124;17125;17126;17127;17128;17129;17130;17131;17132;17133;17134;17135;17136;17137;17138;17139;17140;17141;17142;17143;17144 17135 49 LFTAESLIGLK Unmodified 1190.6911 0.69107503 15 P48444;B0YIW6;P48444-2 ARCN1 Coatomer subunit delta yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 85.469 86.872 2 0.003102 16901 Miao_Sh-c_Flag_mass3_141226_03 80.245 30.822 0 0 0 0 0 0 0 0 0 0 0 0 0 1683 15 1655 15789 17145 17145 1 LFVGGLK Unmodified 732.45341 0.45341094 558 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 3 1 2 2 3 5 1 2 5 6 6 56.901 56.072 1;2 0.012066 11838 Miao_Sh-H9_proteinG_mass3_141226_03 85.306 85.306 219360 2263.4 968.5 1493 3622.9 8126.2 53075 1180.4 0 3811.4 53547 46282 44987 1684 558 1656 15790;15791;15792;15793;15794;15795;15796;15797;15798;15799;15800;15801;15802;15803;15804;15805;15806;15807;15808;15809;15810;15811;15812;15813;15814;15815;15816;15817;15818;15819;15820;15821;15822;15823;15824;15825 17146;17147;17148;17149;17150;17151;17152;17153;17154;17155;17156;17157;17158;17159;17160;17161;17162;17163;17164;17165;17166;17167;17168;17169;17170;17171;17172;17173;17174;17175;17176;17177;17178;17179;17180;17181;17182;17183 17183 37 LFVGGLSFDTNEQSLEQVFSK Unmodified 2344.1587 0.15869207 55 Q14011;K7ELV6;K7ENX8;K7EJV5;K7ELT6;K7EMY9;K7EPM4;K7ER40;K7EQR7;D6W5Y5;B4E2X2;K7EQX4;K7ENN6;K7EIF7;K7EQL0 CIRBP Cold-inducible RNA-binding protein yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 102.35 103.8 3 1.3349E-08 25605 Miao_Sh-c_proteinG_mass3_141226_01 72.883 60.416 0 0 0 0 0 0 0 0 0 0 0 0 0 1685 55 1657 15826 17184 17184 1 LFVGNLPADITEDEFK Unmodified 1806.904 0.90398093 399 P23246;P23246-2 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching 1 2 3 3 1 1 1 1 98.746 94.823 2;3 6.0893E-06 20951 Miao_Sh-c_proteinG_mass3_141226_01 81.651 66.872 23645 0 0 377.49 3525.3 5269.7 5910.6 1258.1 1429.5 0 3012.6 2861.3 0 1686 399 1658 15827;15828;15829;15830;15831;15832;15833;15834;15835;15836;15837;15838;15839 17185;17186;17187;17188;17189;17190;17191;17192 17186 7 LFVGSIPK Unmodified 859.51674 0.51673948 286;281 O60506-4;O60506-3;O60506;O60506-2;O60506-5;O43390;O43390-2;O43390-4;O43390-3;B4DT28;E7ETM7 SYNCRIP;HNRNPR Heterogeneous nuclear ribonucleoprotein Q;Heterogeneous nuclear ribonucleoprotein R no no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 2 1 2 3 62.263 59.721 2 0.00018912 14270 Miao_Sh-c_proteinG_mass3_141226_03 116.37 49.336 22112 0 934.18 0 3547.5 3495.5 0 0 0 2350.9 0 8590.3 3193.3 1687 286;281 1659 15840;15841;15842;15843;15844;15845;15846;15847;15848;15849;15850 17193;17194;17195;17196;17197;17198;17199 17195 7 LFVTGLFSLNQDIPAFK Unmodified 1909.0349 0.034935528 272 O14980 XPO1 Exportin-1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 111.13 111.33 3 0.006787 27859 Miao_Sh-H9_Flag_mass3_141226_02 46.249 37.392 0 0 0 0 0 0 0 0 0 0 0 0 0 1688 272 1660 15851 17200 17200 1 LFVTNDAATILR Unmodified 1332.7402 0.74015049 469 P50990;P50990-2;H7C4C8 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 2 1 1 2 1 1 2 2 74.339 71.732 2 4.9842E-36 15689 Miao_Sh-H9_Flag_mass3_141226_02 173.76 84.004 14523 0 0 305.5 0 3683.8 5281.6 5252 0 0 0 0 0 1689 469 1661 15852;15853;15854;15855;15856;15857;15858;15859;15860;15861;15862;15863;15864 17201;17202;17203;17204;17205;17206;17207;17208;17209;17210;17211;17212;17213 17209 13 LFVVPADEAQAR Unmodified 1314.6932 0.6932003 608 Q8IV08;M0QZI4 PLD3 Phospholipase D3 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 2 2 1 1 2 1 1 1 57.723 58.296 2 0.00054098 9697 Miao_Sh-H9_Flag_mass3_141226_02 106.67 67.885 18869 1280.3 1928.5 1875.8 5850.6 0 0 0 3781 2738.2 902.79 0 511.65 1690 608 1662 15865;15866;15867;15868;15869;15870;15871;15872;15873;15874;15875;15876 17214;17215;17216;17217;17218;17219 17218 6 LFYADHPFIFLVR Unmodified 1636.8766 0.87658439 468 P50454;H0YEP8;E9PKH2 SERPINH1 Serpin H1 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 98.997 97.894 3 0.00011866 39192 Miao_Sh-H9_proteinG_mass3_141226_01 90.697 67.579 8501.1 0 0 1008.4 1705.2 1498.3 0 0 0 1707.8 2581.4 0 0 1691 468 1663 15877;15878;15879;15880;15881;15882 17220;17221;17222 17221 3 LGAAPEEESAYVAGEK Unmodified 1619.7679 0.76788138 157 Q9UNZ2;F2Z2K0;J3QK90;Q9UNZ2-5;Q9UNZ2-6 NSFL1C NSFL1 cofactor p47 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 51.431 50.905 2 0.0051848 6939 Miao_Sh-H9_Flag_mass3_141226_03 53.981 45.281 0 0 0 0 0 0 0 0 0 0 0 0 0 1692 157 1664 15883;15884 17223;17224 17224 2 LGDSPIQK Unmodified 856.46543 0.46543219 150 Q13490;E9PMH5;Q13490-2;H0YDY3;E9PNM6 BIRC2 Baculoviral IAP repeat-containing protein 2 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 33.721 33.905 2 0.045722 3554 Miao_Sh-c_Flag_mass3_141226_01 67.169 26.901 535.79 204.84 0 50.915 0 0 0 0 0 280.03 0 0 0 1693 150 1665 15885;15886;15887 17225 17225 1 LGDTQQSIPGNEER Unmodified 1542.7274 0.72741355 167 P19474;F5H012;P19474-2;H0YDP8 TRIM21 E3 ubiquitin-protein ligase TRIM21 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 4 3 1 3 2 6 2 42.305 42.87 2;3 5.8016E-67 4633 Miao_Sh-H9_Flag_mass3_141226_01 160.87 113.02 12238 1323.3 0 1797.2 0 0 352.31 1278.8 2406.3 3562 0 1517.6 0 1694 167 1666 15888;15889;15890;15891;15892;15893;15894;15895;15896;15897;15898;15899;15900;15901;15902;15903;15904;15905;15906;15907;15908;15909;15910 17226;17227;17228;17229;17230;17231;17232;17233;17234;17235;17236;17237;17238;17239;17240;17241;17242;17243;17244;17245;17246;17247;17248;17249;17250;17251;17252;17253;17254 17246 28 LGDVISIQPCPDVK Unmodified 1539.7967 0.79667909 483 P55072;C9JUP7;C9IZA5 VCP Transitional endoplasmic reticulum ATPase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 67.527 66.484 2 0.0011132 12185 Miao_Sh-H9_Flag_mass3_141226_02 71.98 50.309 0 0 0 0 0 0 0 0 0 0 0 0 0 1695 483 1667 15911 17255 17255 1 LGDVYVNDAFGTAHR Unmodified 1633.7849 0.78486885 63 P00558;B7Z7A9;P07205 PGK1;PGK2 Phosphoglycerate kinase 1;Phosphoglycerate kinase 2 yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 1 2 1 2 1 1 1 1 1 2 68.148 67.319 3 1.8451E-16 16812 Miao_Sh-H9_proteinG_mass3_141226_02 146.27 117.06 57279 5287.6 0 2854.1 4035.3 4484.4 5668.9 5778.6 8774.5 5381.6 5419.9 5174.1 4419.7 1696 63 1668 15912;15913;15914;15915;15916;15917;15918;15919;15920;15921;15922;15923;15924;15925;15926 17256;17257;17258;17259;17260;17261;17262;17263;17264;17265;17266;17267;17268 17268 13 LGEHNIDVLEGNEQFINAAK Unmodified 2210.0968 0.096760517 95 CON__P00761 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 10 5 7 3 3 3 6 5 11 22 18 86.792 81.024 2;3;4 0 14588 Miao_Sh-H9_Flag_mass3_141226_02 324.43 294.33 824080 37214 29214 26928 101810 22403 13223 92697 85422 101130 211400 31003 71628 + 1697 95 1669 15927;15928;15929;15930;15931;15932;15933;15934;15935;15936;15937;15938;15939;15940;15941;15942;15943;15944;15945;15946;15947;15948;15949;15950;15951;15952;15953;15954;15955;15956;15957;15958;15959;15960;15961;15962;15963;15964;15965;15966;15967;15968;15969;15970;15971;15972;15973;15974;15975;15976;15977;15978;15979;15980;15981;15982;15983;15984;15985;15986;15987;15988;15989;15990;15991;15992;15993;15994;15995;15996;15997;15998;15999;16000;16001;16002;16003;16004;16005;16006;16007;16008;16009;16010;16011;16012;16013;16014;16015;16016;16017;16018;16019;16020;16021;16022;16023 17269;17270;17271;17272;17273;17274;17275;17276;17277;17278;17279;17280;17281;17282;17283;17284;17285;17286;17287;17288;17289;17290;17291;17292;17293;17294;17295;17296;17297;17298;17299;17300;17301;17302;17303;17304;17305;17306;17307;17308;17309;17310;17311;17312;17313;17314;17315;17316;17317;17318;17319;17320;17321;17322;17323;17324;17325;17326;17327;17328;17329;17330;17331;17332;17333;17334;17335;17336;17337;17338;17339;17340;17341;17342;17343;17344;17345;17346;17347;17348;17349;17350;17351;17352;17353;17354;17355;17356;17357;17358;17359;17360;17361;17362;17363;17364;17365;17366;17367;17368;17369;17370;17371;17372;17373;17374;17375;17376;17377;17378;17379;17380;17381;17382;17383;17384;17385;17386;17387;17388;17389;17390;17391;17392;17393;17394;17395;17396;17397;17398;17399;17400;17401;17402;17403;17404;17405;17406;17407;17408;17409;17410;17411;17412;17413;17414;17415;17416;17417;17418;17419;17420;17421;17422;17423;17424;17425;17426;17427;17428;17429;17430;17431;17432;17433;17434;17435;17436;17437;17438;17439;17440;17441;17442;17443 17329 174 LGEHNIEVLEGNEQFINAAK Unmodified 2224.1124 0.11241058 101 P07477;P07478;Q8NHM4;H0Y8D1;CON__P07477;E7EQ64 PRSS1;PRSS2;PRSS3P2 Trypsin-1;Alpha-trypsin chain 1;Alpha-trypsin chain 2;Trypsin-2;Putative trypsin-6 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 74.172 74.182 3 0.00026264 14800 Miao_Sh-H9_Flag_mass3_141226_03 68.168 57.129 383710 38380 0 0 111450 0 0 85391 72975 75512 0 0 0 + 1698 101 1670 16024;16025;16026;16027;16028 17444;17445;17446 17446 2 LGEIVTTIPTIGFNVETVEYK Unmodified 2322.2359 0.23587976 387;170 P61204;P84077;F5H423;P84085;F5H0C7;C9J1Z8;P18085;C9JPM4 ARF3;ARF1;ARF5;ARF4 ADP-ribosylation factor 3;ADP-ribosylation factor 1;ADP-ribosylation factor 5;ADP-ribosylation factor 4 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 112.15 101.55 3 2.1281E-05 36254 Miao_Sh-H9_proteinG_mass3_141226_01 58.479 42.077 0 0 0 0 0 0 0 0 0 0 0 0 0 1699 170;387 1671 16029;16030 17447;17448 17447 2 LGEYEDVSR Unmodified 1066.4931 0.49310351 245 Q99426;K7EL99;K7EP07;K7EK42;Q6FGY5 TBCB Tubulin-folding cofactor B yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 40.266 41.218 2 0.0021158 4571 Miao_Sh-H9_Flag_mass3_141226_01 105.2 67.468 1222.9 0 0 0 0 0 0 346.76 0 0 0 0 876.16 1700 245 1672 16031;16032;16033 17449;17450 17450 2 LGEYGFQNALIVR Unmodified 1478.7882 0.78816332 99 CON__P02769 yes yes 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching 1 1 2 1 1 1 1 1 1 81.395 80.766 2;3 8.3066E-06 16787 Miao_Sh-H9_Flag_mass3_141226_02 120.9 83.944 27222 3468.5 4126.2 2712.5 2710.8 2609.6 2078.1 0 4248.4 5267.9 0 0 0 + 1701 99 1673 16034;16035;16036;16037;16038;16039;16040;16041;16042;16043 17451;17452;17453;17454;17455;17456;17457;17458 17458 8 LGFAGLVQEISFGTTK Unmodified 1666.893 0.89302232 66 P48643;E7ENZ3;B7ZAR1;E9PCA1;P48643-2 CCT5 T-complex protein 1 subunit epsilon yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 2 3 1 3 1 1 109.4 102.32 2;3 2.9154E-06 25018 Miao_Sh-H9_Flag_mass3_141226_02 85.362 57.935 53875 0 0 2126.3 2070.2 0 6291.8 0 2926.9 0 17524 12953 9982.8 1702 66 1674 16044;16045;16046;16047;16048;16049;16050;16051;16052;16053;16054;16055;16056;16057;16058 17459;17460;17461;17462;17463;17464;17465;17466;17467;17468;17469 17465 11 LGFEDGSVLK Unmodified 1063.555 0.55497548 113 P09936;D6RE83;D6R956;D6R974 UCHL1 Ubiquitin carboxyl-terminal hydrolase isozyme L1 yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 1 1 1 1 62.355 63.743 2 0.0030476 17454 Miao_Sh-H9_proteinG_mass3_141226_01 93.442 54.688 35896 866.9 1774.4 216.47 3073 0 12487 4307.3 0 3635.8 5770.1 3268.5 497.03 1703 113 1675 16059;16060;16061;16062;16063;16064;16065;16066;16067;16068 17470;17471;17472;17473;17474;17475 17475 6 LGFEDVIAEPVTTHSFDK Unmodified 2003.984 0.98402217 141 P51636;E9PCT3;P51636-2 CAV2 Caveolin-2;Caveolin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 2 80.29 80.441 3 4.0333E-06 17180 Miao_Sh-H9_Flag_mass3_141226_02 80.541 54.333 5363.2 0 0 901.65 0 0 0 0 3363.4 1098.2 0 0 0 1704 141 1676 16069;16070;16071;16072 17476;17477 17476 1 LGGIGQFLAK Unmodified 1002.5862 0.58621603 548 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 71.625 71.383 2 0.013145 19939 Miao_Sh-H9_proteinG_mass3_141226_03 72.243 30.941 16344 0 1150.1 0 0 0 7065.6 815.31 0 0 3338.9 910.21 3063.5 1705 548 1677 16073;16074;16075;16076;16077;16078 17478;17479;17480 17480 3 LGGLRPESPESLTSVSR Unmodified 1783.9428 0.94282606 649 Q9H6F5;H0YG79 CCDC86 Coiled-coil domain-containing protein 86 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 56.488 58.894 3 0.014821 15367 Miao_Sh-H9_proteinG_mass3_141226_02 43.135 28.147 0 0 0 0 0 0 0 0 0 0 0 0 0 1706 649 1678 16079 17481 17481 1 LGGLTQAPGNPVLAVQINQDK Unmodified 2132.159 0.15896684 413 P26368;P26368-2;K7ENG2 U2AF2 Splicing factor U2AF 65 kDa subunit yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 78.321 71.554 3 0.0035274 25085 Miao_Sh-c_proteinG_mass3_141226_03 43.823 32.18 1699.2 0 0 0 0 0 1292.2 0 0 0 406.96 0 0 1707 413 1679 16080;16081 17482 17482 1 LGGSAVISLEGKPL Unmodified 1339.7711 0.77111627 404 P23528;G3V1A4;E9PK25 CFL1 Cofilin-1 yes no 0 0 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 5 1 2 6 2 1 2 3 6 77.198 73.539 2 7.8923E-13 28980 Miao_Sh-H9_proteinG_mass3_141226_03 139.64 110.28 32327 4343.3 3022.5 1011.4 4664.1 2212.6 547.4 3864.9 0 5814.9 6584.5 0 261.3 1708 404 1680 16082;16083;16084;16085;16086;16087;16088;16089;16090;16091;16092;16093;16094;16095;16096;16097;16098;16099;16100;16101;16102;16103;16104;16105;16106;16107;16108;16109;16110;16111 17483;17484;17485;17486;17487;17488;17489;17490;17491;17492;17493;17494;17495;17496;17497;17498;17499;17500;17501;17502;17503;17504;17505;17506;17507;17508;17509;17510;17511;17512;17513;17514;17515;17516;17517;17518;17519 17516 37 LGGSPFGPAGTGK Unmodified 1144.5877 0.58767259 568 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 42.045 48.41 2 0.028013 10352 Miao_Sh-c_proteinG_mass3_141226_03 46.704 29.791 0 0 0 0 0 0 0 0 0 0 0 0 0 1709 568 1681 16112 17520 17520 1 LGHPDTLNQGEFK Unmodified 1454.7154 0.7153923 332 P06702 S100A9 Protein S100-A9 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 44.468 47.034 3 0.0048918 4852 Miao_Sh-c_proteinG_mass3_141226_01 58.098 46.84 9075.3 0 0 0 745.79 0 1327.1 359.03 0 0 0 4568.7 2074.7 1710 332 1682 16113;16114;16115;16116;16117 17521 17521 1 LGHPEALSAGTGSPQPPSFTYAQQR Unmodified 2596.267 0.26701374 36 Q15942;H7C3D3;B4DQX7;B4DQR8;H0Y2Y8 ZYX Zyxin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 62.67 62.72 3 0.0020598 10650 Miao_Sh-H9_Flag_mass3_141226_03 40.177 32.896 0 0 0 0 0 0 0 0 0 0 0 0 0 1711 36 1683 16118 17522 17522 1 LGIHEDSTNR Unmodified 1140.5523 0.55234972 344 P08238 HSP90AB1 Heat shock protein HSP 90-beta yes yes 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 1 1 30.279 31.288 3 0.0013398 2960 Miao_Sh-H9_Flag_mass3_141226_02 90.827 45.746 2305.6 0 273.12 260.33 0 0 321.93 23.579 268.97 531.59 0 521.09 104.93 1712 344 1684 16119;16120;16121;16122;16123;16124;16125;16126 17523;17524 17524 2 LGLALNFSVFYYEILNSPEK Unmodified 2316.2042 0.2041857 523;427 P63104;E7EX29;B0AZS6;P63104-2;B7Z2E6;H0YB80;P31946;P31946-2 YWHAZ;YWHAB 14-3-3 protein zeta/delta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed no no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 115.24 115.46 3 0.00023274 27846 Miao_Sh-c_Flag_mass3_141226_03 58.848 41.607 6060.5 2850.3 0 2768.7 0 0 0 441.52 0 0 0 0 0 1713 523;427 1685 16127;16128;16129;16130 17525;17526;17527 17526 3 LGLEDFESLK Unmodified 1149.5918 0.59175492 577 Q15208 STK38 Serine/threonine-protein kinase 38 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 2 2 1 1 1 3 2 1 81.195 80.389 2 2.9208E-19 17327 Miao_Sh-H9_Flag_mass3_141226_03 168.46 114.69 53203 6800.5 8378 6366.8 544.67 471.58 0 0 16926 11549 0 0 2165.7 1714 577 1686 16131;16132;16133;16134;16135;16136;16137;16138;16139;16140;16141;16142;16143;16144;16145 17528;17529;17530;17531;17532;17533;17534;17535;17536;17537;17538 17538 11 LGLGIDEDEVAAEEPNAAVPDEIPPLEGDEDASR Unmodified 3531.6377 0.63766166 344 P08238 HSP90AB1 Heat shock protein HSP 90-beta yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 89.868 91.322 3 0.00018441 20810 Miao_Sh-c_proteinG_mass3_141226_01 30.609 28.456 0 0 0 0 0 0 0 0 0 0 0 0 0 1715 344 1687 16146 17539 17539 1 LGLIEWLENTVTLK Unmodified 1627.9185 0.91850879 533 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 117.2 117.92 2 1.9983E-05 30595 Miao_Sh-H9_Flag_mass3_141226_02 107.74 87.981 0 0 0 0 0 0 0 0 0 0 0 0 0 1716 533 1688 16147;16148 17540;17541 17541 2 LGLQNDLFSLAR Unmodified 1345.7354 0.73539946 149 P55786;E9PLK3;B7Z463 NPEPPS Puromycin-sensitive aminopeptidase yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 3 88.237 87.953 2 0.005153 17588 Miao_Sh-c_Flag_mass3_141226_02 72.681 48.405 7550.3 0 2509.4 0 0 0 0 3273.6 0 1767.3 0 0 0 1717 149 1689 16149;16150;16151;16152;16153;16154 17542;17543;17544;17545 17542 4 LGLQSLR Unmodified 785.47594 0.4759373 387 P18085;C9JAK5;U3KQF2 ARF4 ADP-ribosylation factor 4 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 50.704 52.518 2 0.0036695 13781 Miao_Sh-H9_proteinG_mass3_141226_01 120.52 43.675 6195.3 464.96 0 0 0 0 1839.4 200.1 0 0 2823.3 867.49 0 1718 387 1690 16155;16156;16157;16158;16159 17546 17546 1 LGNPIVPLNIR Unmodified 1204.7292 0.72919187 533 P78527;E7EUY0;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 72.582 72.933 2 0.037537 12917 Miao_Sh-c_Flag_mass3_141226_02 48.981 24.087 0 0 0 0 0 0 0 0 0 0 0 0 0 1719 533 1691 16160 17547 17547 1 LGPGGLDPVEVYESLPEELQK Unmodified 2268.1525 0.15254406 242 Q16543;K7EIU0;K7EQA9 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 111.44 102.68 3 0.00059042 24337 Miao_Sh-H9_Flag_mass3_141226_03 50.515 38.382 8871.2 0 0 0 0 0 0 0 0 3588.3 0 3090.4 2192.5 1720 242 1692 16161;16162;16163;16164 17548;17549 17549 1 LGQIYQSWLDK Unmodified 1349.698 0.69795133 275 O15258;Q5T093;Q5T092;Q5T091 RER1 Protein RER1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 76.239 75.612 2 0.003277 15421 Miao_Sh-H9_Flag_mass3_141226_02 77.597 42.152 0 0 0 0 0 0 0 0 0 0 0 0 0 1721 275 1693 16165;16166 17550;17551 17551 2 LGSIAIQGAIEK Unmodified 1198.6921 0.69213767 406 P24752;H0YEL7;E9PRQ6;G3XAB4 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 57.726 60.132 2 0.019552 15880 Miao_Sh-H9_proteinG_mass3_141226_02 54.276 28.264 0 0 0 0 0 0 0 0 0 0 0 0 0 1722 406 1694 16167 17552 17552 1 LGSIFGLGLAYAGSNR Unmodified 1594.8467 0.84674083 559 Q13200;E9PCS3;E7EW34 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 89.904 91.495 2 0.02017 18918 Miao_Sh-c_Flag_mass3_141226_02 47.223 36.766 7592.9 2994.5 2001.6 0 448.04 2148.8 0 0 0 0 0 0 0 1723 559 1695 16168;16169;16170;16171 17553 17553 1 LGSLVDEFK Unmodified 1006.5335 0.53351176 363 P12956;B1AHC8;B1AHC9;F5H1I8 XRCC6 X-ray repair cross-complementing protein 6 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 65.441 67.178 2 0.0018754 19138 Miao_Sh-H9_proteinG_mass3_141226_01 101.65 15.56 6245.5 0 0 0 0 0 0 0 0 0 2423.2 2223.1 1599.2 1724 363 1696 16172;16173;16174 17554 17554 1 LGSSSLTNIPEEVR Unmodified 1500.7784 0.77838649 599 Q6P3W7;F8VSC5 SCYL2 SCY1-like protein 2 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 2 1 1 2 63.241 65.121 2 1.2991E-05 11655 Miao_Sh-H9_Flag_mass3_141226_03 110.84 42.62 10728 3659.9 2986.9 3223.8 0 0 857.26 0 0 0 0 0 0 1725 599 1697 16175;16176;16177;16178;16179;16180;16181 17555;17556;17557;17558;17559;17560;17561 17561 7 LGSTVFVANLDYK Unmodified 1425.7504 0.75038083 471 P52272;P52272-2;M0R019;M0R2T0;M0QYQ7 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 3 1 4 76.381 75.489 2 0.00025539 14449 Miao_Sh-c_proteinG_mass3_141226_01 95.264 79.4 11728 0 0 4112.4 3453.4 0 0 0 0 0 800.51 2575.9 785.85 1726 471 1698 16182;16183;16184;16185;16186;16187;16188;16189;16190;16191;16192;16193;16194 17562;17563;17564;17565;17566;17567;17568;17569;17570;17571 17563 10 LGVAGQWR Unmodified 885.48209 0.48208531 113 P09936;D6RE83;D6R956;D6R974;D6RF53 UCHL1 Ubiquitin carboxyl-terminal hydrolase isozyme L1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 1 1 46.165 50.777 2 0.0019233 11847 Miao_Sh-H9_proteinG_mass3_141226_03 104.45 63.527 0 0 0 0 0 0 0 0 0 0 0 0 0 1727 113 1699 16195;16196 17572;17573 17573 2 LGVIEDHSNR Unmodified 1138.5731 0.57308516 369 P14625;Q58FF3 HSP90B1;HSP90B2P Endoplasmin;Putative endoplasmin-like protein yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 33.434 34.737 3 0.01691 7184 Miao_Sh-H9_proteinG_mass3_141226_01 56.404 35.627 670.82 0 0 64.842 0 0 0 0 0 0 383.16 0 222.82 1728 369 1700 16197;16198;16199 17574 17574 1 LGVQVVITDPEK Unmodified 1296.7289 0.7289171 386 P17987;F5H282;E7EQR6;E7ERF2;F5GZ03 TCP1 T-complex protein 1 subunit alpha yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 72.661 63.889 2 0.0091071 10679 Miao_Sh-H9_Flag_mass3_141226_01 63.966 37.259 4067.9 0 0 0 0 0 0 2784.3 0 0 0 0 1283.6 1729 386 1701 16200;16201 17575 17575 1 LHDNLIISDLENTVK Unmodified 1722.9152 0.91521432 184 Q69YQ0;F8WAN1;Q69YQ0-2;C9J8U1 SPECC1L;SPECC1L-ADORA2A Cytospin-A yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 2 1 1 89.462 82.004 3 0.014486 17605 Miao_Sh-c_proteinG_mass3_141226_01 44.391 28.319 5941.1 0 0 0 2501.9 0 0 0 0 348 504.1 585.97 2001.1 1730 184 1702 16202;16203;16204;16205;16206;16207 17576;17577 17576 2 LHEEEIQELQAQIQEQHVQIDVDVSKPDLTAALR Unmodified 3922.0072 0.0072238131 346 P08670;B0YJC4;B0YJC5;Q5JVS8 VIM Vimentin yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching 1 1 101.95 95.762 4;5 7.0737E-08 20249 Miao_Sh-H9_Flag_mass3_141226_02 38.988 37.087 13741 0 0 0 0 0 0 0 6422.3 0 7318.9 0 0 1731 346 1703 16208;16209 17578;17579 17578 0 LHFFMPGFAPLTSR Unmodified 1619.8283 0.82825399 338;530;566;315;642 P07437;Q5JP53;Q5ST81;Q3ZCM7;F5H0I4;Q5SQY0;I3L2F9;A6NNZ2;P68371;Q9BVA1;Q13885;P04350;Q9BUF5;K7ESM5 TUBB;TUBB8;TUBB4B;TUBB2B;TUBB2A;TUBB4A;TUBB6 Tubulin beta chain;Tubulin beta-8 chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-4B chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-4A chain;Tubulin beta-6 chain no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 2 2 3 2 1 2 2 3 1 1 1 95.206 93.382 2;3 1.6262E-06 18619 Miao_Sh-c_Flag_mass3_141226_03 118.88 96.826 56546 5778.7 0 9006.6 4401.6 3105.5 0 8338.2 12209 7539.7 4327.5 836.43 1002.9 1732 338;530;566;315;642 1704 16210;16211;16212;16213;16214;16215;16216;16217;16218;16219;16220;16221;16222;16223;16224;16225;16226;16227;16228;16229 17580;17581;17582;17583;17584;17585;17586;17587;17588;17589;17590;17591;17592;17593;17594;17595;17596;17597;17598;17599 17583 20 LHFFMPGFAPLTSR Oxidation (M) 1635.8232 0.82316861 338;530;566;315;642 P07437;Q5JP53;Q5ST81;Q3ZCM7;F5H0I4;Q5SQY0;I3L2F9;A6NNZ2;P68371;Q9BVA1;Q13885;P04350;Q9BUF5;K7ESM5 TUBB;TUBB8;TUBB4B;TUBB2B;TUBB2A;TUBB4A;TUBB6 Tubulin beta chain;Tubulin beta-8 chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-4B chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-4A chain;Tubulin beta-6 chain no no 0 0 1 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 1 89.626 84.713 3 0.0007438 17234 Miao_Sh-H9_Flag_mass3_141226_02 93.766 63.59 6678.1 0 0 0 771.04 801.94 0 0 1973.2 0 1558.9 0 1573 1733 338;530;566;315;642 1704 16230;16231;16232;16233;16234 17600;17601 17600 41 2 LHIIEVGTPPTGNQPFPK Unmodified 1944.0469 0.046897198 535 Q00610;Q00610-2 CLTC Clathrin heavy chain 1 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 68.289 68.448 3 4.0114E-05 11425 Miao_Sh-c_Flag_mass3_141226_03 66.436 53.015 24083 1719 3182.6 4720.3 0 0 0 0 6424.4 5524.7 2512 0 0 1734 535 1705 16235;16236;16237;16238;16239;16240 17602;17603;17604 17602 3 LHLSGIDANPNALFPPVEFPAPR Unmodified 2471.2961 0.29612903 464 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 92.272 92.447 3 2.0572E-08 19616 Miao_Sh-c_Flag_mass3_141226_01 70.174 63.9 3092.7 2122.5 970.28 0 0 0 0 0 0 0 0 0 0 1735 464 1706 16241;16242 17605 17605 1 LHTYLAGEAPTLADLAAVTALLLPFR Unmodified 2736.5214 0.52143752 416 P26640;A2ABF4 VARS Valine--tRNA ligase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 121.88 122.53 3 0.0017519 32438 Miao_Sh-H9_Flag_mass3_141226_03 38.562 36.273 0 0 0 0 0 0 0 0 0 0 0 0 0 1736 416 1707 16243 17606 17606 1 LHVTALDYLAPYAK Unmodified 1573.8504 0.85042922 237 Q9Y221;J3QRD6;J3QRR4;J3QLW7;Q9Y221-2 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 79.452 81.223 3 0.0001153 16701 Miao_Sh-c_proteinG_mass3_141226_01 73.881 47.869 2813 0 0 0 1191.3 830.75 0 0 790.99 0 0 0 0 1737 237 1708 16244;16245;16246 17607 17607 0 LIADVAPSAIR Unmodified 1124.6554 0.65535823 168 P39748;F5H1Y3 FEN1 Flap endonuclease 1 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 56.266 58.472 2 0.0029079 15377 Miao_Sh-H9_proteinG_mass3_141226_02 83.182 42.686 1388.4 0 544.16 0 0 844.27 0 0 0 0 0 0 0 1738 168 1709 16247;16248;16249 17608;17609 17609 2 LIALLEVLSQK Unmodified 1225.7646 0.76457433 570;392 P21333;Q5HY54;P21333-2;Q14315;Q14315-2 FLNA;FLNC Filamin-A;Filamin-C no no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 2 1 2 1 1 1 108.51 104.11 2 0.0014147 38744 Miao_Sh-H9_proteinG_mass3_141226_01 108.53 71.94 9262.7 0 0 0 0 0 0 367.04 0 4418.5 4477.2 0 0 1739 392;570 1710 16250;16251;16252;16253;16254;16255;16256;16257 17610;17611;17612;17613;17614;17615;17616 17616 7 LIALSIDSVEDHLAWSK Unmodified 1895.9993 0.9992783 423 P30041 PRDX6 Peroxiredoxin-6 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 99.733 94.179 3 0.00061752 20936 Miao_Sh-H9_Flag_mass3_141226_03 62.658 50.238 12341 0 712.99 0 1741 0 0 0 2175.2 0 4121.2 0 3590.6 1740 423 1711 16258;16259;16260;16261;16262;16263 17617;17618 17618 2 LIAPVAEEEATVPNNK Unmodified 1693.8887 0.88866522 336 P07195;A8MW50;C9J7H8;F5H793 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 4 2 1 3 2 2 2 1 2 2 56.1 57.857 2;3 8.8377E-16 15095 Miao_Sh-H9_proteinG_mass3_141226_02 100.4 78.617 55274 2951.2 0 0 2304.3 2300 5464.9 6258.4 2306.8 5720.5 7178.1 11325 9464.8 1741 336 1712 16264;16265;16266;16267;16268;16269;16270;16271;16272;16273;16274;16275;16276;16277;16278;16279;16280;16281;16282;16283;16284;16285;16286 17619;17620;17621;17622;17623;17624;17625;17626;17627;17628;17629;17630;17631;17632;17633;17634;17635;17636;17637;17638;17639;17640;17641;17642;17643;17644;17645 17642 25 LIAQNLELNETIK Unmodified 1497.8403 0.84025847 473 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 2 1 1 3 2 1 68.079 68.725 2;3 4.5698E-37 12637 Miao_Sh-H9_Flag_mass3_141226_01 164.92 120.38 16536 290.71 3486.6 2246.7 0 0 170.37 4161.3 1726.4 4453.9 0 0 0 1742 473 1713 16287;16288;16289;16290;16291;16292;16293;16294;16295;16296;16297;16298 17646;17647;17648;17649;17650;17651;17652;17653 17650 8 LIDFLESGK Unmodified 1020.5492 0.54916182 79 Q92841;Q92841-3;C9JMU5;H3BLZ8;Q92841-1;Q92841-2 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 70.173 71.526 2 0.019509 13642 Miao_Sh-c_proteinG_mass3_141226_01 70.028 34.733 0 0 0 0 0 0 0 0 0 0 0 0 0 1743 79 1714 16299 17654 17654 1 LIDLHSPSEIVK Unmodified 1349.7555 0.7554662 489 P60866;P60866-2;G3XAN0 RPS20 40S ribosomal protein S20 yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 2 4 1 1 1 2 1 58.191 60.547 2;3 6.1611E-05 14897 Miao_Sh-c_proteinG_mass3_141226_03 123.95 66.359 83694 0 8313.1 0 13965 12034 26317 0 0 0 23065 0 0 1744 489 1715 16300;16301;16302;16303;16304;16305;16306;16307;16308;16309;16310;16311 17655;17656;17657;17658;17659;17660;17661;17662;17663;17664;17665 17662 11 LIEVDDER Unmodified 987.48729 0.48728985 512 P62753;A2A3R7 RPS6 40S ribosomal protein S6 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 1 1 1 41.854 42.806 2 0.00073591 4077 Miao_Sh-c_proteinG_mass3_141226_02 111.95 34.665 12173 0 723.24 757.62 0 0 0 0 0 976.66 5130.5 4584.9 0 1745 512 1716 16312;16313;16314;16315;16316;16317;16318 17666;17667;17668 17666 3 LIFAGKKLEDGR GlyGly (K) 1459.8147 0.81471242 239 J3QRK5;K7EMA8 UBBP4 yes no 0 1 0 0 2 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 94.127 80.543 3 0.0033357 28158 Miao_Sh-c_proteinG_mass3_141226_03 78.903 33.223 0 0 0 0 0 0 0 0 0 0 0 0 0 1746 239 1717 16319 17669 17669 1 LIFAGKQLEDGR GlyGly (K) 1459.7783 0.77832691 45;239 P0CG47;P62979;P62987;J3QS39;J3QTR3;F5H6Q2;F5GYU3;F5H2Z3;F5H265;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q96C32;F5H041;P0CG48;M0R1V7;F5GZ39;M0R1M6;M0R2S1;J3QLP7;J3QRK5 UBB;RPS27A;UBA52;UBC;UBBP4 Polyubiquitin-B;Ubiquitin;Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-C;Ubiquitin no no 0 1 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 6 10 2 3 6 3 4 5 4 3 3 62.709 61.556 2;3 1.0408E-116 8287 Miao_Sh-H9_Flag_mass3_141226_01 234.79 147.07 1545900 291160 27832 0 1977.3 8718.3 17213 71223 586260 522070 9263.9 0 10191 1747 45;239 1718 16320;16321;16322;16323;16324;16325;16326;16327;16328;16329;16330;16331;16332;16333;16334;16335;16336;16337;16338;16339;16340;16341;16342;16343;16344;16345;16346;16347;16348;16349;16350;16351;16352;16353;16354;16355;16356;16357;16358;16359;16360;16361;16362;16363;16364;16365;16366;16367;16368;16369;16370 17670;17671;17672;17673;17674;17675;17676;17677;17678;17679;17680;17681;17682;17683;17684;17685;17686;17687;17688;17689;17690;17691;17692;17693;17694;17695;17696;17697;17698;17699;17700;17701;17702;17703;17704;17705;17706;17707;17708;17709;17710;17711;17712;17713;17714;17715;17716;17717;17718;17719;17720;17721;17722;17723;17724;17725;17726;17727;17728;17729;17730;17731;17732;17733;17734;17735;17736;17737;17738;17739;17740;17741;17742;17743;17744;17745;17746;17747;17748;17749;17750;17751;17752 17714 2;11 82 LIFAGKQLEDGRTLSDYNIQK GlyGly (K) 2522.3129 0.3129013 45 P0CG47;P62979;P62987;J3QS39;J3QTR3;F5H6Q2;F5GYU3;F5H2Z3;F5H265;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q96C32;F5H041;P0CG48;M0R1V7;M0R1M6;M0R2S1 UBB;RPS27A;UBA52;UBC Polyubiquitin-B;Ubiquitin;Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-C;Ubiquitin yes no 0 1 0 0 2 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 2 1 3 2 1 69.116 69.104 3;4 3.0958E-13 11748 Miao_Sh-c_Flag_mass3_141226_02 105.79 80.6 145150 6907.1 24514 20105 0 0 0 30094 32539 30990 0 0 0 1748 45 1719 16371;16372;16373;16374;16375;16376;16377;16378;16379;16380 17753;17754;17755;17756;17757;17758;17759;17760;17761;17762;17763 17756 2;3 11 LIFSTITSK Unmodified 1008.5855 0.58554733 453 P43686;P43686-2 PSMC4 26S protease regulatory subunit 6B yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 3 1 1 1 1 64.541 64.326 2 0.0031708 9812 Miao_Sh-c_Flag_mass3_141226_01 90.696 61.547 23195 2657.7 0 3451.4 926.9 668.42 1456.4 5281.2 0 5337 1512 908.68 995.48 1749 453 1720 16381;16382;16383;16384;16385;16386;16387;16388;16389;16390;16391;16392;16393 17764;17765;17766;17767;17768;17769;17770;17771 17764 8 LIGEELAQLK Unmodified 1112.6441 0.64412484 83 P54252;P54252-2;S4R399;G3V328;G3V3R7;C9JQV6;F5H211;P54252-3;P54252-4;G3V2G2;G3V526;E9PJN5;G3V2G1;G3V3T6;G3V4U9;P54252-5 ATXN3 Ataxin-3 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 1 69.059 69.593 2 0.0019827 13163 Miao_Sh-H9_Flag_mass3_141226_02 106.35 56.227 15316 0 2209.8 0 1669.6 0 0 0 4886.9 4522.9 1028.8 998.01 0 1750 83 1721 16394;16395;16396;16397;16398;16399;16400 17772;17773;17774;17775 17774 4 LIGEYGLR Unmodified 919.51272 0.51271674 459 P46781;B5MCT8;C9JM19;F2Z3C0;A8MXK4 RPS9 40S ribosomal protein S9 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 1 1 3 2 4 64.399 60.81 2 9.9143E-05 14742 Miao_Sh-H9_proteinG_mass3_141226_01 140.09 50.416 102370 3676.3 2763.6 0 7055.2 5370.9 18478 6697.7 0 5766 25174 21336 6057 1751 459 1722 16401;16402;16403;16404;16405;16406;16407;16408;16409;16410;16411;16412;16413;16414;16415;16416;16417;16418 17776;17777;17778;17779;17780;17781;17782;17783;17784;17785;17786;17787;17788;17789;17790;17791;17792;17793;17794;17795;17796;17797;17798;17799;17800;17801;17802;17803;17804;17805;17806;17807 17792 32 LILIESR Unmodified 842.52255 0.52255314 505 P62277 RPS13 40S ribosomal protein S13 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 8 1 2 2 2 5 2 60.012 58.788 2 5.0534E-24 24208 Miao_Sh-c_proteinG_mass3_141226_03 154.92 65.245 162220 5684.6 4952.8 4881.2 7559.8 5389 20604 9582.6 10512 9730.3 39780 24683 18860 1752 505 1723 16419;16420;16421;16422;16423;16424;16425;16426;16427;16428;16429;16430;16431;16432;16433;16434;16435;16436;16437;16438;16439;16440;16441;16442;16443;16444;16445 17808;17809;17810;17811;17812;17813;17814;17815;17816;17817;17818;17819;17820;17821;17822;17823;17824;17825;17826;17827;17828;17829;17830;17831;17832;17833;17834;17835;17836;17837;17838;17839;17840;17841;17842;17843;17844;17845;17846;17847;17848;17849;17850;17851;17852;17853;17854;17855;17856;17857 17822 50 LILPELGPVFK Unmodified 1224.7482 0.74819598 599 Q6P3W7;F8VSC5;H0YIK6 SCYL2 SCY1-like protein 2 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 3 2 1 1 93.603 94.038 2 0.0031709 19722 Miao_Sh-c_Flag_mass3_141226_02 79.201 28.135 38311 0 30561 3092.9 0 0 0 0 0 4657 0 0 0 1753 599 1724 16446;16447;16448;16449;16450;16451;16452 17858;17859;17860;17861;17862;17863;17864;17865;17866 17859 9 LINLVGESLR Unmodified 1112.6554 0.65535823 456 P46379;P46379-2;P46379-3;P46379-4;P46379-5;F6S6P2;X6REW1 BAG6 Large proline-rich protein BAG6 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 1 1 1 2 69.525 70.644 2 0.0022853 13566 Miao_Sh-H9_Flag_mass3_141226_03 110.46 36.793 12437 0 0 0 0 0 0 805.24 4146.6 3707.5 0 993.74 2784.3 1754 456 1725 16453;16454;16455;16456;16457;16458;16459 17867;17868;17869 17869 3 LIQIAAR Unmodified 783.49667 0.49667274 643 Q9BUJ2;Q9BUJ2-2;B7Z4B8;Q9BUJ2-4;M0R3F1;Q9BUJ2-3 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 43.396 45.619 2 0.0011769 11063 Miao_Sh-H9_proteinG_mass3_141226_01 138.48 5.0105 35301 0 0 0 1987 1557.2 0 0 0 0 31757 0 0 1755 643 1726 16460;16461;16462;16463 17870;17871;17872;17873 17873 4 LISQIVSSITASLR Unmodified 1486.8719 0.87189295 529 P68363 TUBA1B Tubulin alpha-1B chain no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 3 2 2 3 2 4 3 2 3 2 2 109.74 106.13 2;3 4.2811E-169 38955 Miao_Sh-H9_proteinG_mass3_141226_01 257.04 220.36 748330 38164 53248 55016 41837 51208 68475 89630 94275 58849 96470 61347 39807 1756 529 1727 16464;16465;16466;16467;16468;16469;16470;16471;16472;16473;16474;16475;16476;16477;16478;16479;16480;16481;16482;16483;16484;16485;16486;16487;16488;16489;16490;16491;16492 17874;17875;17876;17877;17878;17879;17880;17881;17882;17883;17884;17885;17886;17887;17888;17889;17890;17891;17892;17893;17894;17895;17896;17897;17898;17899;17900;17901;17902;17903;17904;17905;17906;17907;17908;17909;17910;17911;17912;17913;17914;17915;17916;17917;17918;17919;17920;17921;17922;17923;17924;17925;17926;17927;17928;17929;17930;17931;17932;17933;17934;17935;17936;17937;17938;17939;17940;17941;17942;17943;17944;17945;17946;17947;17948;17949;17950;17951;17952;17953;17954;17955;17956;17957;17958;17959;17960;17961;17962;17963;17964;17965;17966;17967;17968;17969;17970;17971;17972;17973;17974;17975;17976;17977;17978;17979;17980;17981;17982;17983;17984;17985;17986;17987;17988;17989;17990;17991 17970 118 LISWYDNEFGYSNR Unmodified 1762.7951 0.79509919 316 P04406;P04406-2;E7EUT5 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 1 4 3 1 2 1 2 2 4 1 1 83.654 81.129 2;3 5.5859E-72 17638 Miao_Sh-H9_Flag_mass3_141226_03 203.74 174.5 105370 14327 4664.8 5662.2 26109 6179.7 1576.4 9391.2 19535 16135 898.76 0 892.73 1757 316 1728 16493;16494;16495;16496;16497;16498;16499;16500;16501;16502;16503;16504;16505;16506;16507;16508;16509;16510;16511;16512;16513;16514;16515;16516 17992;17993;17994;17995;17996;17997;17998;17999;18000;18001;18002;18003;18004;18005;18006;18007;18008;18009;18010;18011;18012;18013;18014;18015;18016;18017 18012 26 LITEDVQGK Unmodified 1001.5393 0.53932542 492 P61247;F5H4F9;H0Y8L7;E9PFI5;D6RAT0;D6RED7;D6RAS7;D6RB09;D6RG13;D6RGE0 RPS3A 40S ribosomal protein S3a yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 1 1 1 38.81 39.903 2 0.0004775 8376 Miao_Sh-H9_proteinG_mass3_141226_02 120.31 59.507 19444 768.44 684.27 733.32 560.92 746.87 0 693.44 690.36 0 7315.6 6429.7 821 1758 492 1729 16517;16518;16519;16520;16521;16522;16523;16524;16525;16526 18018;18019;18020;18021;18022;18023;18024;18025 18025 8 LITPAVVSER Unmodified 1083.6288 0.62880913 515 P62851 RPS25 40S ribosomal protein S25 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 3 1 1 1 1 2 1 1 1 1 1 53.392 55.055 2 2.3203E-25 7008 Miao_Sh-c_Flag_mass3_141226_01 175.65 105.12 338110 10278 0 11458 12440 15096 61502 15240 17182 27237 53782 52358 61536 1759 515 1730 16527;16528;16529;16530;16531;16532;16533;16534;16535;16536;16537;16538;16539;16540;16541 18026;18027;18028;18029;18030;18031;18032;18033;18034;18035;18036;18037;18038;18039;18040;18041;18042;18043;18044;18045;18046;18047;18048;18049;18050;18051;18052;18053;18054;18055;18056;18057;18058;18059;18060;18061;18062;18063;18064;18065;18066;18067 18028 42 LIVDEAINEDNSVVSLSQPK Unmodified 2169.1165 0.11649291 483 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 4 3 1 1 2 3 3 3 2 81.611 77.761 2;3 1.0465E-52 15789 Miao_Sh-H9_Flag_mass3_141226_01 171.13 143.87 85396 0 0 877.69 0 0 1208.7 31515 16072 31626 4096.4 0 0 1760 483 1731 16542;16543;16544;16545;16546;16547;16548;16549;16550;16551;16552;16553;16554;16555;16556;16557;16558;16559;16560;16561;16562;16563 18068;18069;18070;18071;18072;18073;18074;18075;18076;18077;18078;18079;18080;18081;18082;18083;18084;18085;18086;18087;18088 18077 21 LIVENLSSR Unmodified 1029.5819 0.58185893 31 Q08170;Q13247;Q13243;B4DJK0;B4DUA4;F6T1J1;Q13243-3;Q13247-3 SRSF4;SRSF6;SRSF5 Serine/arginine-rich splicing factor 4;Serine/arginine-rich splicing factor 6;Serine/arginine-rich splicing factor 5 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 53.647 54.65 2 0.0026966 12837 Miao_Sh-H9_proteinG_mass3_141226_02 91.867 19.917 6539.8 0 0 414.87 0 0 0 1930.9 0 1501.5 0 2692.6 0 1761 31 1732 16564;16565;16566;16567 18089;18090 18089 2 LIVNVNDLR Unmodified 1054.6135 0.61349341 408 P25205;B4DWW4 MCM3 DNA replication licensing factor MCM3 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 2 1 63.14 67.166 2 0.009379 17377 Miao_Sh-c_proteinG_mass3_141226_03 80.688 36.881 0 0 0 0 0 0 0 0 0 0 0 0 0 1762 408 1733 16568;16569;16570 18091;18092;18093 18092 3 LKGDDLQAIK Unmodified 1099.6237 0.62372375 50 P07910;P07910-2;G3V576;G3V4W0;B4DY08;G3V4C1;G3V2Q1;O60812;P07910-3;G3V5V7;G3V2D6 HNRNPC;HNRNPCL1 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 1 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 2 38.756 40.896 3 0.0069633 8256 Miao_Sh-c_proteinG_mass3_141226_03 80.706 17.287 5789.3 0 0 0 149.11 0 1657.8 0 88.747 0 436.96 1858.6 1598 1763 50 1734 16571;16572;16573;16574;16575;16576;16577 18094;18095;18096 18094 2 LKGEATVSFDDPPSAK Unmodified 1660.8308 0.83081599 435 P35637;P35637-2;H3BPE7 FUS RNA-binding protein FUS yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 2 78.367 69.345 3 0.002203 23274 Miao_Sh-H9_proteinG_mass3_141226_02 57.595 31.063 0 0 0 0 0 0 0 0 0 0 0 0 0 1764 435 1735 16578;16579 18097;18098 18097 2 LKPEDITQIQPQQLVLR Unmodified 2018.1524 0.1524249 327 P05556;P05556-2;P05556-5;P05556-4;P05556-3;C9JPK5;E7ERX5;Q5T3E6;E9PLR6;E7EUI6;E7EQW5 ITGB1 Integrin beta-1;Integrin beta yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 79.626 78.924 3 0.0030447 16528 Miao_Sh-H9_Flag_mass3_141226_02 52.569 38.265 0 0 0 0 0 0 0 0 0 0 0 0 0 1765 327 1736 16580 18099 18099 1 LKVPPAINQFTQALDR Unmodified 1810.0101 0.010117761 509 P62424;Q5T8U3 RPL7A 60S ribosomal protein L7a yes no 0 0 0 0 1 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 85.394 86.121 3 0.0002753 35802 Miao_Sh-H9_proteinG_mass3_141226_01 71.685 58.062 2235.6 847.51 0 0 1388 0 0 0 0 0 0 0 0 1766 509 1737 16581;16582;16583 18100;18101 18101 2 LKYENEVALR Unmodified 1233.6717 0.67173657 104 P13645;CON__P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 47.573 48.385 3 2.2451E-17 10428 Miao_Sh-c_proteinG_mass3_141226_03 152.7 97.633 13120 0 0 0 612.1 0 0 0 1587 1664.4 5724.3 3532.5 0 + 1767 104 1738 16584;16585;16586;16587;16588;16589 18102;18103;18104;18105;18106;18107 18102 6 LLADQAEAR Unmodified 985.51926 0.51925868 233 P84098;J3QR09;J3KTE4 RPL19 60S ribosomal protein L19;Ribosomal protein L19 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 1 2 2 1 34.121 35.544 2 4.2313E-07 7134 Miao_Sh-H9_proteinG_mass3_141226_02 142.43 55.105 29297 760.22 706.8 684.27 721.18 701.66 5549.5 0 888.64 691.19 6953.2 6012.7 5627.7 1768 233 1739 16590;16591;16592;16593;16594;16595;16596;16597;16598;16599;16600;16601;16602 18108;18109;18110;18111;18112;18113;18114;18115;18116;18117;18118 18118 11 LLDAVDTYIPVPAR Unmodified 1541.8453 0.84534384 465 P49411 TUFM Elongation factor Tu, mitochondrial yes yes 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 1 1 2 2 1 2 2 1 87.082 82.037 2;3 5.5515E-14 17504 Miao_Sh-H9_Flag_mass3_141226_03 139.74 87.249 20419 2379.8 2772.6 1279.4 4487.9 0 0 1332.9 0 0 3453.2 2699.2 2013.8 1769 465 1740 16603;16604;16605;16606;16607;16608;16609;16610;16611;16612;16613;16614;16615;16616;16617;16618;16619;16620 18119;18120;18121;18122;18123;18124;18125;18126;18127;18128;18129;18130;18131;18132 18129 14 LLDEVFFSEK Unmodified 1225.6231 0.62305505 213 P25789;H0YMZ1;H0YL69;H0YMI6;H0YMA1;H0YN18;H0YLC2;H0YKT8;H0YLS6 PSMA4 Proteasome subunit alpha type-4;Proteasome subunit alpha type;Proteasome subunit beta type yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 2 1 2 2 81.084 80.914 2 1.0924E-06 17139 Miao_Sh-H9_Flag_mass3_141226_03 138.76 95.68 30780 8343.8 0 0 0 0 0 10709 0 11727 0 0 0 1770 213 1741 16621;16622;16623;16624;16625;16626;16627;16628;16629 18133;18134;18135;18136;18137;18138;18139;18140 18139 8 LLDSLEPPGEPGPSTNIPENDTVDGR Unmodified 2718.2984 0.29843303 627 Q92734;Q92734-2;C9JUE0;C9JJP5 TFG Protein TFG yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 4 3 6 76.695 72.861 3 5.1176E-41 23036 Miao_Sh-H9_proteinG_mass3_141226_01 110.03 93.436 19321 0 0 0 11635 0 0 0 0 0 0 7685.7 0 1771 627 1742 16630;16631;16632;16633;16634;16635;16636;16637;16638;16639;16640;16641;16642;16643;16644 18141;18142;18143;18144;18145;18146;18147;18148;18149;18150;18151;18152;18153;18154;18155;18156 18146 15 LLDSLEPPGEPGPSTNIPENDTVDGREEK Unmodified 3104.4786 0.47858224 627 Q92734;Q92734-2;C9JUE0;C9JJP5 TFG Protein TFG yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 94.06 76.867 3 4.3471E-16 28332 Miao_Sh-H9_proteinG_mass3_141226_03 72.082 67.18 0 0 0 0 0 0 0 0 0 0 0 0 0 1772 627 1743 16645 18157 18157 1 LLEGEDAHLSSQQASGQSYSSR Unmodified 2349.0833 0.083295297 102 P08779;CON__P08779 KRT16 Keratin, type I cytoskeletal 16 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 2 1 1 46.46 48.766 3 3.4007E-34 11987 Miao_Sh-H9_proteinG_mass3_141226_01 127.25 98.08 6577.9 0 0 0 1013.3 0 0 0 0 0 0 0 5564.6 + 1773 102 1744 16646;16647;16648;16649;16650;16651 18158;18159;18160;18161;18162;18163;18164 18161 7 LLEGEDAHLSSSQFSSGSQSSR Unmodified 2308.0567 0.056746196 97 P02533;CON__P02533;CON__Q61782 KRT14 Keratin, type I cytoskeletal 14 yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 3 2 2 1 52.234 54.233 2;3 8.9732E-87 14153 Miao_Sh-H9_proteinG_mass3_141226_01 196.83 168.69 51127 724.27 1109.5 0 6035.3 4486.2 11294 0 0 0 17765 0 9713.6 + 1774 97 1745 16652;16653;16654;16655;16656;16657;16658;16659;16660;16661;16662;16663 18165;18166;18167;18168;18169;18170;18171;18172;18173;18174;18175;18176;18177;18178;18179 18174 14 LLEGEDAHLTQYK Unmodified 1515.7569 0.75692277 109 Q04695;CON__Q04695;CON__Q9QWL7;F5GWP8 KRT17 Keratin, type I cytoskeletal 17 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 49.179 50.465 3 0.02379 12871 Miao_Sh-H9_proteinG_mass3_141226_02 44.511 22.518 4589.1 116.28 420.54 0 0 292.66 0 306.94 0 0 1193.9 2258.7 0 + 1775 109 1746 16664;16665;16666;16667;16668;16669 18180;18181 18181 2 LLEGEECR Unmodified 1004.4597 0.45969489 98;105;108 P02538;CON__P02538;P48668;CON__P04259;CON__P48668;O95678;CON__O95678;Q01546;CON__P07744;CON__Q01546;Q8N1N4;CON__Q8N1N4-2;CON__Q7RTT2;Q8N1N4-2;H0YIC5;P13647;CON__P13647;H0YI76;P35908;CON__P35908;CON__Q6NXH9 KRT6A;KRT6C;KRT75;KRT76;KRT78;KRT73;KRT5;KRT2 Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 78;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 2 epidermal no no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 1 1 1 2 1 1 1 34.154 35.284 2 2.6127E-18 7402 Miao_Sh-H9_proteinG_mass3_141226_01 170.3 113.49 29381 331.58 383.83 828.14 1186.7 1243.5 6136.5 390.87 549.62 646.87 7607.3 4950.6 5125.5 + 1776 98;105;108 1747 16670;16671;16672;16673;16674;16675;16676;16677;16678;16679;16680;16681;16682;16683 18182;18183;18184;18185;18186;18187;18188;18189;18190;18191;18192;18193;18194;18195 18192 14 LLEGEEER Unmodified 973.47164 0.47163978 312 P02545;P02545-2;P02545-6;P02545-3;Q5TCI8;P02545-5;P02545-4;P20700;Q03252;E9PBF6;J9JID7 LMNA;LMNB1;LMNB2 Prelamin-A/C;Lamin-A/C;Lamin-B1;Lamin-B2 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 34.641 35.193 2 0.013262 3362 Miao_Sh-H9_Flag_mass3_141226_03 76.679 27.32 989.21 197.79 0 0 143.54 0 0 209.09 0 0 0 438.79 0 1777 312 1748 16684;16685;16686;16687;16688;16689 18196;18197;18198;18199 18199 4 LLEGEESR Unmodified 931.46108 0.4610751 346;100 P05787;CON__P05787;P05787-2;P08729;Q9NSB2;CON__Q9DCV7;CON__Q3KNV1;CON__P08729;CON__Q9H552;CON__Q9NSB2;CON__Q6ISB0;P08670;B0YJC4;B0YJC5;P17661;P41219;H7C5W5;P41219-2 KRT8;KRT7;KRT84;VIM;DES;PRPH Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 7;Keratin, type II cuticular Hb4;Vimentin;Desmin;Peripherin no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 2 1 1 1 1 1 1 1 1 1 32.44 33.342 2 3.3689E-12 3465 Miao_Sh-c_Flag_mass3_141226_01 163.2 93.298 11165 1349.2 0 1272.5 1413.1 1439.2 0 1191.1 1303.6 0 0 0 3196.6 + 1778 100;346 1749 16690;16691;16692;16693;16694;16695;16696;16697;16698;16699;16700;16701 18200;18201;18202;18203;18204;18205;18206;18207;18208;18209;18210;18211;18212;18213;18214;18215;18216;18217 18201 18 LLELGPKPEVAQQTR Unmodified 1677.9414 0.94136949 478 P53621;P53621-2 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 0 1 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 52.659 53.394 3 7.7318E-05 7177 Miao_Sh-c_proteinG_mass3_141226_01 80.738 44.321 3901.8 1707.8 0 0 1858.9 0 0 0 0 0 335.11 0 0 1779 478 1750 16702;16703;16704 18218 18218 1 LLEPVLLLGK Unmodified 1093.7111 0.71108219 259 P62249;M0R210;M0R3H0;M0QX76;M0R1M5;Q6IPX4 RPS16 40S ribosomal protein S16 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 1 1 1 3 1 1 97.98 93.614 2 2.4161E-07 37892 Miao_Sh-H9_proteinG_mass3_141226_03 140.17 95.189 94837 7921.7 6929.3 0 12577 0 10750 8425.2 16637 9543.8 0 11273 10780 1780 259 1751 16705;16706;16707;16708;16709;16710;16711;16712;16713;16714;16715;16716;16717 18219;18220;18221;18222;18223;18224;18225;18226;18227;18228;18229;18230;18231;18232;18233;18234;18235;18236;18237;18238 18236 20 LLESLDQLELR Unmodified 1327.7347 0.73473076 306 O95816 BAG2 BAG family molecular chaperone regulator 2 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 2 1 2 1 1 1 81.461 81.686 2 7.8936E-91 15274 Miao_Sh-c_Flag_mass3_141226_01 218.62 130.95 115460 24302 0 13893 179.4 0 0 29823 23663 23599 0 0 0 1781 306 1752 16718;16719;16720;16721;16722;16723;16724;16725;16726 18239;18240;18241;18242;18243;18244;18245;18246;18247;18248;18249;18250;18251;18252;18253;18254 18240 16 LLETECPQYIR Unmodified 1420.7021 0.70205043 321 P05109 S100A8 Protein S100-A8;Protein S100-A8, N-terminally processed yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 53.336 56.021 2 0.0013233 14907 Miao_Sh-H9_proteinG_mass3_141226_02 107.06 44.589 9642.4 347.19 0 0 0 128.88 1934.5 0 0 0 2786.7 3347.1 1098 1782 321 1753 16727;16728;16729;16730;16731;16732 18255;18256;18257;18258 18258 4 LLEVEHPAAK Unmodified 1105.6132 0.61315906 386 P17987;E7ERF2;F5H676;F5H136;F5H726;F5GZI8 TCP1 T-complex protein 1 subunit alpha yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 36.73 38.415 3 0.02383 7774 Miao_Sh-H9_proteinG_mass3_141226_03 51.436 20.824 3025.9 0 0 0 87.58 0 0 0 0 0 1272 930.68 735.67 1783 386 1754 16733;16734;16735;16736 18259 18259 1 LLEVQGSRPGK Unmodified 1182.6721 0.67207093 497 P62136;E9PMD7 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 2 35.451 37.155 2;3 0.0071905 7704 Miao_Sh-H9_proteinG_mass3_141226_01 76.843 26.803 3487 0 0 137.64 0 137.22 0 0 63.242 0 1089.4 936.4 1123.1 1784 497 1755 16737;16738;16739;16740;16741;16742;16743 18260;18261;18262 18260 3 LLFNAGNIANHFFTVPFLR Unmodified 2190.1738 0.17382905 585 Q16222;Q16222-2;Q16222-3 UAP1 UDP-N-acetylhexosamine pyrophosphorylase;UDP-N-acetylgalactosamine pyrophosphorylase;UDP-N-acetylglucosamine pyrophosphorylase yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 111.45 112.74 3 0.00011764 25463 Miao_Sh-c_Flag_mass3_141226_03 58.427 49.765 3725.9 0 0 0 0 1205.7 0 959.9 0 1560.3 0 0 0 1785 585 1756 16744;16745;16746;16747;16748 18263;18264;18265 18264 3 LLGALAAR Unmodified 783.49667 0.49667274 648 Q9H1Z9 TSPAN10 Tetraspanin-10 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 43.098 45.704 2 1.555E-05 10473 Miao_Sh-H9_proteinG_mass3_141226_02 148.21 9.7264 24055 0 0 0 0 0 0 0 0 0 0 24055 0 1786 648 1757 16749 18266;18267;18268 18266 3 LLGGLAVR Unmodified 797.51232 0.51232281 402 P23396;F2Z2S8;H0YCJ7;E9PL09;P23396-2;H0YF32 RPS3 40S ribosomal protein S3 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 2 1 1 53.249 56.131 2 0.0032602 15093 Miao_Sh-H9_proteinG_mass3_141226_01 98.418 11.906 11043 0 0 0 849.89 763.07 3606.3 0 0 0 292.46 2911.9 2619 1787 402 1758 16750;16751;16752;16753;16754;16755;16756 18269;18270;18271;18272 18271 4 LLGGVTIAQGGVLPNIQAVLLPK Unmodified 2270.3726 0.37258843 376 P16104;Q96QV6;Q8IUE6 H2AFX;HIST1H2AA;HIST2H2AB Histone H2AX;Histone H2A type 1-A;Histone H2A type 2-B yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 2 2 2 104.62 108.88 3 5.2591E-21 24726 Miao_Sh-c_Flag_mass3_141226_02 92.133 88.861 7418.1 0 0 0 0 7418.1 0 0 0 0 0 0 0 1788 376 1759 16757;16758;16759;16760;16761;16762;16763;16764;16765;16766 18273;18274;18275;18276;18277;18278;18279;18280;18281;18282;18283;18284 18273 12 LLGNTFVALSDLR Unmodified 1417.7929 0.79291434 456 P46379;P46379-2;P46379-3;P46379-4;P46379-5;F6S6P2;X6REW1 BAG6 Large proline-rich protein BAG6 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 95.836 91.099 2 8.4844E-05 20021 Miao_Sh-H9_Flag_mass3_141226_01 95.345 64.456 5764.1 0 0 0 0 0 0 0 0 4675.2 0 1088.9 0 1789 456 1760 16767;16768;16769 18285;18286 18285 2 LLGNVLVVVLAR Unmodified 1264.8231 0.82309226 96 CON__P02070;CON__Q3SX09 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 2 1 107.31 100.7 2 0.0015618 21866 Miao_Sh-c_Flag_mass3_141226_02 108.35 76.854 1843.2 0 0 0 0 1373.2 0 0 0 0 0 0 470.01 + 1790 96 1761 16770;16771;16772;16773 18287;18288;18289 18287 3 LLGPSAAADILQLSSSLPLQSR Unmodified 2236.2427 0.24269647 600 Q7Z6Z7;Q7Z6Z7-2;Q7Z6Z7-3;H0Y5W0 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 2 2 2 109.11 109.06 3 3.4946E-12 26140 Miao_Sh-H9_Flag_mass3_141226_01 80.994 62.981 3723.1 0 0 0 0 0 0 0 0 3723.1 0 0 0 1791 600 1762 16774;16775;16776;16777;16778;16779;16780 18290;18291;18292;18293;18294;18295;18296 18292 7 LLGQFTLIGIPPAPR Unmodified 1591.945 0.94499831 441 P38646;H0Y8S0 HSPA9 Stress-70 protein, mitochondrial yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 3 3 18 22 7 4 7 5 23 10 11 103 98.49 2;3 2.0936E-151 36228 Miao_Sh-H9_proteinG_mass3_141226_01 241.07 213.54 654950 1704.8 3050.9 2958.3 102530 32686 106620 2974.1 7214.8 5157.4 140860 160800 88388 1792 441 1763 16781;16782;16783;16784;16785;16786;16787;16788;16789;16790;16791;16792;16793;16794;16795;16796;16797;16798;16799;16800;16801;16802;16803;16804;16805;16806;16807;16808;16809;16810;16811;16812;16813;16814;16815;16816;16817;16818;16819;16820;16821;16822;16823;16824;16825;16826;16827;16828;16829;16830;16831;16832;16833;16834;16835;16836;16837;16838;16839;16840;16841;16842;16843;16844;16845;16846;16847;16848;16849;16850;16851;16852;16853;16854;16855;16856;16857;16858;16859;16860;16861;16862;16863;16864;16865;16866;16867;16868;16869;16870;16871;16872;16873;16874;16875;16876;16877;16878;16879;16880;16881;16882;16883;16884;16885;16886;16887;16888;16889;16890;16891;16892;16893;16894 18297;18298;18299;18300;18301;18302;18303;18304;18305;18306;18307;18308;18309;18310;18311;18312;18313;18314;18315;18316;18317;18318;18319;18320;18321;18322;18323;18324;18325;18326;18327;18328;18329;18330;18331;18332;18333;18334;18335;18336;18337;18338;18339;18340;18341;18342;18343;18344;18345;18346;18347;18348;18349;18350;18351;18352;18353;18354;18355;18356;18357;18358;18359;18360;18361;18362;18363;18364;18365;18366;18367;18368;18369;18370;18371;18372;18373;18374;18375;18376;18377;18378;18379;18380;18381;18382;18383;18384;18385;18386;18387;18388;18389;18390;18391;18392;18393;18394;18395;18396;18397;18398;18399;18400;18401;18402;18403;18404;18405;18406;18407;18408;18409;18410;18411;18412;18413;18414;18415;18416;18417;18418;18419;18420;18421;18422;18423;18424;18425;18426;18427;18428;18429;18430;18431;18432;18433;18434;18435;18436;18437;18438;18439;18440;18441;18442;18443;18444;18445;18446;18447;18448;18449;18450;18451;18452;18453;18454;18455;18456;18457;18458;18459;18460;18461;18462;18463;18464;18465;18466;18467;18468;18469;18470;18471;18472;18473;18474;18475;18476;18477;18478;18479;18480;18481;18482;18483;18484;18485;18486;18487;18488;18489;18490;18491;18492;18493;18494;18495;18496;18497;18498;18499;18500;18501;18502;18503;18504;18505;18506;18507;18508;18509;18510;18511;18512;18513;18514;18515;18516;18517;18518;18519;18520;18521;18522;18523;18524;18525 18436 228 LLGWIQNK Unmodified 970.56 0.56000128 570;392 P21333;Q5HY54;P21333-2;Q14315;Q14315-2 FLNA;FLNC Filamin-A;Filamin-C no no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 64.487 65.891 2 0.0071871 10370 Miao_Sh-c_Flag_mass3_141226_03 91.9 39.601 0 0 0 0 0 0 0 0 0 0 0 0 0 1793 392;570 1764 16895 18526 18526 1 LLIAAQK Unmodified 755.49052 0.49052473 121;292 O94905;E5RHW4;E5RJ09;O75477;B0QZ43 ERLIN2;ERLIN1 Erlin-2;Erlin-1 no no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 39.79 40.279 2 0.0091856 4568 Miao_Sh-H9_Flag_mass3_141226_01 102.98 59.914 878.86 0 0 290.59 0 0 0 262.84 18.454 0 0 306.97 0 1794 121;292 1765 16896;16897;16898;16899 18527;18528 18528 2 LLIHQSLAGGIIGVK Unmodified 1517.9293 0.92934824 494 P61978;P61978-2;Q5T6W5;P61978-3;Q5T6W2;Q5T6W1 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 2 2 1 2 1 2 86.576 81.271 2;3 7.9609E-13 32458 Miao_Sh-H9_proteinG_mass3_141226_01 138.55 123.92 56470 7804.5 0 5038.2 0 0 4716.1 14455 4682.5 0 9170.4 3933.4 6670.4 1795 494 1766 16900;16901;16902;16903;16904;16905;16906;16907;16908;16909;16910;16911;16912;16913;16914 18529;18530;18531;18532;18533;18534;18535;18536;18537;18538;18539;18540;18541;18542;18543;18544;18545;18546;18547;18548;18549 18542 20 LLIVSNPVDILTYVAWK Unmodified 1943.1132 0.11318585 309 P00338;P00338-3;P00338-2;P00338-5;F5GXY2 LDHA L-lactate dehydrogenase A chain yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 3 6 2 1 1 2 118.46 116.83 2;3 6.0726E-14 27577 Miao_Sh-c_Flag_mass3_141226_02 110.57 97.151 23329 3948.9 0 0 8931.4 0 38.101 0 5367.7 5043 0 0 0 1796 309 1767 16915;16916;16917;16918;16919;16920;16921;16922;16923;16924;16925;16926;16927;16928;16929 18550;18551;18552;18553;18554;18555;18556;18557;18558;18559;18560;18561;18562;18563;18564;18565;18566 18555 17 LLIVSTTPYSEK Unmodified 1349.7442 0.74423282 671 Q9Y230;M0R0Y3;B3KQ59 RUVBL2 RuvB-like 2 yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 2 1 1 1 2 1 1 1 61.59 63.492 2 0.00672 10586 Miao_Sh-c_proteinG_mass3_141226_01 65.179 43.151 11067 0 0 1601.9 703.3 179.58 1917.5 0 1303.2 2293.4 0 1676.8 1391 1797 671 1768 16930;16931;16932;16933;16934;16935;16936;16937;16938;16939;16940 18567;18568;18569;18570 18568 4 LLIVVELLLGEIPDR Unmodified 1691.0233 0.02330821 280 O43242;B4DT72 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 2 1 1 1 1 2 121.46 122.41 2;3 2.7076E-05 32468 Miao_Sh-H9_Flag_mass3_141226_03 82.59 79.117 23987 4509.8 3339.7 3438.5 0 564.25 0 2685.2 5239.1 4210.4 0 0 0 1798 280 1769 16941;16942;16943;16944;16945;16946;16947;16948;16949 18571;18572;18573;18574;18575;18576 18576 6 LLIYAILPDGEVVGDSAR Unmodified 1900.0306 0.030578432 91 CON__ENSEMBL:ENSBTAP00000024146 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 92.758 93.033 3 4.7957E-05 21390 Miao_Sh-H9_Flag_mass3_141226_01 65.231 54.856 1388.3 0 0 318.06 0 0 0 1070.2 0 0 0 0 0 + 1799 91 1770 16950;16951 18577;18578 18577 2 LLLAVFVTPLTDLR Unmodified 1569.9494 0.94941498 143 P43246;E9PHA6;P43246-2 MSH2 DNA mismatch repair protein Msh2 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 113.39 113.24 2 1.4107E-05 26185 Miao_Sh-c_Flag_mass3_141226_01 86.944 66.167 1322.9 0 0 0 0 0 0 0 0 1322.9 0 0 0 1800 143 1771 16952;16953 18579;18580 18579 2 LLLEVTYEAIVDGGINPDSLR Unmodified 2286.2107 0.21072764 464 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 109.32 109.67 3 0.049635 25077 Miao_Sh-c_Flag_mass3_141226_02 29.842 19.227 0 0 0 0 0 0 0 0 0 0 0 0 0 1801 464 1772 16954 18581 18581 1 LLLIGDSGVGK Unmodified 1070.6336 0.63356015 490 P61026;P62820;Q9H0U4;P61006;P51153;Q92930;P59190;Q92928;P59190-2;H0YLJ8;H0YL94;H0YMN7;E7ETK2;E9PLD0;E7END7;B7Z8M7;H0YNE9;F5GY21;P62820-3;P62820-2;B4DEK7 RAB10;RAB1A;RAB1B;RAB8A;RAB13;RAB8B;RAB15;RAB1C Ras-related protein Rab-10;Ras-related protein Rab-1A;Ras-related protein Rab-1B;Ras-related protein Rab-8A;Ras-related protein Rab-13;Ras-related protein Rab-8B;Ras-related protein Rab-15;Putative Ras-related protein Rab-1C yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 65.316 65.968 2 0.014837 17580 Miao_Sh-H9_proteinG_mass3_141226_03 63.944 12.157 11016 0 945.51 823.56 1559.3 0 0 2139.7 487.78 0 3111.6 0 1948.8 1802 490 1773 16955;16956;16957;16958;16959;16960;16961 18582;18583;18584;18585;18586 18586 5 LLLNNDNLLR Unmodified 1196.6877 0.68772099 475 P52907;P47755;C9JUG7;F8W9N7;P47755-2 CAPZA1;CAPZA2 F-actin-capping protein subunit alpha-1;F-actin-capping protein subunit alpha-2 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 68.241 67.652 2 0.0028809 12088 Miao_Sh-c_Flag_mass3_141226_01 94.409 47.327 6122.7 2238.5 0 0 0 208.82 2626.3 0 0 0 1049 0 0 1803 475 1774 16962;16963;16964;16965 18587 18587 1 LLLPGELAK Unmodified 952.59572 0.59571809 37 Q93079;Q99879;Q99877;Q5QNW6;P58876;O60814;P62807;P57053;U3KQK0;B4DR52;Q5QNW6-2;Q99880;Q96A08 HIST1H2BH;HIST1H2BM;HIST1H2BN;HIST2H2BF;HIST1H2BD;HIST1H2BK;HIST1H2BC;H2BFS;HIST1H2BL;HIST1H2BA Histone H2B type 1-H;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-C/E/F/G/I;Histone H2B type F-S;Histone H2B;Histone H2B type 1-L;Histone H2B type 1-A no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 3 1 1 1 2 1 2 2 3 2 2 71.051 69.271 2 0.00022817 28688 Miao_Sh-H9_proteinG_mass3_141226_02 123.35 40.902 1059200 49025 43866 40406 99889 81937 153860 74825 94622 102010 167520 28433 122800 1804 37 1775 16966;16967;16968;16969;16970;16971;16972;16973;16974;16975;16976;16977;16978;16979;16980;16981;16982;16983;16984;16985;16986 18588;18589;18590;18591;18592;18593;18594;18595;18596;18597;18598;18599;18600;18601;18602;18603;18604;18605;18606;18607;18608;18609;18610;18611;18612;18613;18614;18615;18616;18617;18618;18619;18620;18621;18622;18623;18624;18625;18626;18627;18628;18629;18630;18631;18632;18633;18634;18635;18636;18637;18638;18639;18640;18641;18642;18643 18632 56 LLLPWLEAR Unmodified 1109.6597 0.65971533 535 Q00610;Q00610-2 CLTC Clathrin heavy chain 1 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 2 2 1 1 2 1 1 100.01 98.116 2 8.149E-05 23226 Miao_Sh-H9_Flag_mass3_141226_02 128.36 67.925 38353 0 13695 2867.2 3120.9 0 0 4422.2 6789.5 6909.4 0 0 548.83 1805 535 1776 16987;16988;16989;16990;16991;16992;16993;16994;16995;16996;16997;16998 18644;18645;18646;18647;18648;18649;18650;18651;18652;18653;18654;18655;18656;18657 18655 14 LLLQVQHASK Unmodified 1135.6713 0.67134264 322;361 P12236;I7HJJ0;P12235;V9GYG0;P05141 SLC25A6;SLC25A4;SLC25A5 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed;ADP/ATP translocase 1;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 2 2 1 1 2 1 3 1 1 43.126 44.282 2;3 0.00073627 5014 Miao_Sh-H9_Flag_mass3_141226_02 99.568 38.658 19194 686.45 680.22 817.68 29.474 0 3388.2 1508.3 2505.5 0 4289.6 2595.3 2693 1806 361;322 1777 16999;17000;17001;17002;17003;17004;17005;17006;17007;17008;17009;17010;17011;17012;17013 18658;18659;18660;18661;18662;18663;18664;18665;18666;18667;18668;18669;18670 18666 13 LLNQPNQWPLVK Unmodified 1448.814 0.81398414 373 P14923 JUP Junction plakoglobin yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 67.957 73.42 2 0.039543 19537 Miao_Sh-c_proteinG_mass3_141226_03 45.829 29.112 0 0 0 0 0 0 0 0 0 0 0 0 0 1807 373 1778 17014 18671 18671 1 LLNTFLER Unmodified 1004.5655 0.56548059 568 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 66.416 67.293 2 0.040164 10872 Miao_Sh-c_Flag_mass3_141226_03 69.598 27 2170.4 0 0 876.8 0 0 0 0 0 0 1293.6 0 0 1808 568 1779 17015;17016 18672 18672 1 LLNTVEETTK Unmodified 1146.6132 0.61321864 473 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 1 42.922 43.702 2 0.0020413 4500 Miao_Sh-c_Flag_mass3_141226_01 99.283 59.736 3724.4 705.24 578.44 0 0 107.28 0 28.295 825.88 927.9 0 0 551.35 1809 473 1780 17017;17018;17019;17020;17021;17022;17023 18673;18674;18675;18676;18677 18673 5 LLPSLIGR Unmodified 867.55419 0.55418762 300 O76021;J3QSV6;I3L3C4;I3L3U9 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 1 1 1 63.239 65.023 2 0.01835 18141 Miao_Sh-H9_proteinG_mass3_141226_01 81.191 31.064 11006 0 467.77 630.9 1106.1 1278.4 1664.7 598.8 0 1116.8 1821.9 1237.5 1083.6 1810 300 1781 17024;17025;17026;17027;17028;17029;17030;17031;17032;17033 18678;18679;18680 18679 3 LLQAQGVEVPSK Unmodified 1267.7136 0.71360139 289 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 48.904 51.591 2 0.0019925 12020 Miao_Sh-H9_proteinG_mass3_141226_03 92.295 45.833 9454.4 0 0 0 83.584 0 2723.3 0 0 1537.2 0 3747.5 1362.8 1811 289 1782 17034;17035;17036;17037;17038 18681;18682;18683;18684 18684 4 LLQDFFNGK Unmodified 1080.5604 0.56039521 356;382 P11142;E9PKE3;P11142-2;E9PNE6;A8K7Q2;E9PN89;P54652;P17066 HSPA8;HSPA2;HSPA6 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 6 no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 2 3 5 2 1 2 3 4 6 75.22 73.317 2 3.7801E-15 12591 Miao_Sh-c_Flag_mass3_141226_03 167.12 96.867 228760 18044 17822 27043 15985 17708 26535 24544 33003 0 27513 19756 805.59 1812 356;382 1783 17039;17040;17041;17042;17043;17044;17045;17046;17047;17048;17049;17050;17051;17052;17053;17054;17055;17056;17057;17058;17059;17060;17061;17062;17063;17064;17065;17066;17067;17068;17069;17070;17071;17072;17073 18685;18686;18687;18688;18689;18690;18691;18692;18693;18694;18695;18696;18697;18698;18699;18700;18701;18702;18703;18704;18705;18706;18707;18708;18709;18710;18711;18712;18713;18714;18715;18716;18717;18718;18719;18720;18721;18722;18723;18724;18725;18726;18727;18728;18729;18730;18731;18732;18733;18734;18735;18736 18693 52 LLQDFFNGR Unmodified 1108.5665 0.56654322 343 P08107;P08107-2;E7EP94;V9GZ37 HSPA1A Heat shock 70 kDa protein 1A/1B yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching 1 1 2 1 1 1 2 1 76.23 74.495 2 0.0021752 13161 Miao_Sh-c_Flag_mass3_141226_03 98.009 40.962 14930 1720.9 1725.9 2080.8 0 1375.6 695.97 0 5080 0 1738.4 0 512.55 1813 343 1784 17074;17075;17076;17077;17078;17079;17080;17081;17082;17083 18737;18738;18739;18740;18741;18742 18739 6 LLQDSVDFSLADAINTEFK Unmodified 2125.0579 0.057915395 346 P08670;B0YJC4 VIM Vimentin yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 3 1 1 2 3 105.62 102.7 2;3 1.501E-11 37403 Miao_Sh-H9_proteinG_mass3_141226_02 89.859 73.636 27723 3773.8 0 0 6629.2 0 0 4403.7 0 0 12916 0 0 1814 346 1785 17084;17085;17086;17087;17088;17089;17090;17091;17092;17093;17094;17095;17096 18743;18744;18745;18746;18747;18748;18749;18750;18751;18752;18753;18754;18755;18756;18757 18753 15 LLQDWPGPR Unmodified 1080.5716 0.5716286 690 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 84.293 74.518 2 0.0020818 14391 Miao_Sh-H9_Flag_mass3_141226_03 99.139 40.534 20996 0 0 0 0 0 0 0 0 19463 300.11 0 1233.4 + 1815 690 1786 17097;17098;17099 18758;18759;18760;18761 18760 4 LLQLVEDR Unmodified 984.5604 0.56039521 34 P17844;J3KTA4;B4DLW8 DDX5 Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 55.025 57.33 2 0.0053862 13947 Miao_Sh-c_proteinG_mass3_141226_03 101.25 36.476 7526.3 0 0 0 0 0 3086.1 1634.5 0 0 930.32 0 1875.4 1816 34 1787 17100;17101;17102;17103 18762;18763;18764 18763 3 LLQSLGLK Unmodified 870.55385 0.55385327 573 Q14764 MVP Major vault protein yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 2 1 1 3 3 4 65.404 63.484 1;2 0.00068223 15257 Miao_Sh-H9_proteinG_mass3_141226_03 126.82 12.936 330280 552.32 0 0 16828 11916 61551 1065 1550.7 0 84004 64120 88697 1817 573 1788 17104;17105;17106;17107;17108;17109;17110;17111;17112;17113;17114;17115;17116;17117;17118;17119;17120 18765;18766;18767;18768;18769;18770;18771;18772;18773;18774;18775;18776;18777;18778;18779;18780;18781;18782;18783;18784;18785 18780 20 LLQSLLDTR Unmodified 1057.6132 0.61315906 556 Q13045;Q13045-2;Q13045-3 FLII Protein flightless-1 homolog yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 62.583 68.347 2 0.04245 17758 Miao_Sh-c_proteinG_mass3_141226_03 57.347 12.594 0 0 0 0 0 0 0 0 0 0 0 0 0 1818 556 1789 17121 18786 18786 1 LLQTLPQLR Unmodified 1080.6655 0.66552898 594 Q5T4S7;Q5T4S7-3;Q5T4S7-4;Q5T4S7-2;X6RE05 UBR4 E3 ubiquitin-protein ligase UBR4 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 74.169 69.056 2 0.0099367 12196 Miao_Sh-H9_Flag_mass3_141226_02 78.816 34.421 3970.4 674.95 0 0 124.95 0 1011.3 170.49 1817.1 0 0 0 171.66 1819 594 1790 17122;17123;17124;17125;17126;17127 18787 18787 1 LLREELQLLQEQGSYVGEVVR Unmodified 2457.3227 0.32273771 498 P62195;P62195-2;J3QQM1;J3QLH6;J3KRP2;J3QSA9;J3QSE0 PSMC5 26S protease regulatory subunit 8 yes no 0 0 0 0 1 By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 93.495 93.069 3 3.5511E-08 20479 Miao_Sh-H9_Flag_mass3_141226_01 67.849 59.01 0 0 0 0 0 0 0 0 0 0 0 0 0 1820 498 1791 17128;17129 18788;18789 18789 2 LLSGDTYEAVVTAVDPVADIATLR Unmodified 2488.3061 0.30608459 282 O43464;O43464-2;O43464-3;O43464-4 HTRA2 Serine protease HTRA2, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 109.82 109.16 3 7.6271E-07 26356 Miao_Sh-H9_Flag_mass3_141226_01 61.612 55.476 2960.9 0 0 0 0 0 0 2960.9 0 0 0 0 0 1821 282 1792 17130 18790 18790 1 LLSISGK Unmodified 716.44324 0.44324019 334 P06748;P06748-2;P06748-3;E5RI98 NPM1 Nucleophosmin yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1 1 1 42.59 44.212 2 0.0036816 4366 Miao_Sh-c_Flag_mass3_141226_03 120.49 40.026 114890 0 2554.5 2681 2432.2 1931 25693 2551.2 2829.6 2944.1 28828 21241 21204 1822 334 1793 17131;17132;17133;17134;17135;17136;17137;17138;17139;17140;17141 18791;18792;18793;18794;18795;18796;18797;18798;18799;18800;18801;18802;18803;18804;18805;18806;18807;18808;18809;18810;18811 18792 21 LLSNDEVTIK Unmodified 1130.6183 0.61830402 627 Q92734;Q92734-2;C9JUE0;C9JJP5;C9JTY3 TFG Protein TFG yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 49.496 52.303 2 2.4909E-05 11606 Miao_Sh-c_proteinG_mass3_141226_03 130.41 63.243 96405 0 0 0 2742.7 0 21128 0 0 0 28991 23190 20352 1823 627 1794 17142;17143;17144;17145;17146;17147;17148 18812;18813;18814;18815;18816;18817;18818;18819;18820 18814 9 LLSSFDFFLTDAR Unmodified 1530.7718 0.77184455 300 O76021;J3QSV6;I3L3C4;I3L3U9;I3L234 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 2 2 1 2 110.08 105.78 2 0.00013886 38445 Miao_Sh-H9_proteinG_mass3_141226_01 103.83 62.038 23327 305.7 0 0 3918.8 0 988.4 2580.3 2845.9 0 8696.8 3990.6 0 1824 300 1795 17149;17150;17151;17152;17153;17154;17155;17156;17157;17158;17159 18821;18822;18823;18824;18825;18826;18827;18828 18826 8 LLTFQTWPLTFLSPTDLAK Unmodified 2191.1929 0.19289273 562 Q13489 BIRC3 Baculoviral IAP repeat-containing protein 3 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 116.26 116.66 3 0.017466 29940 Miao_Sh-H9_Flag_mass3_141226_02 37.4 27.025 2067.6 0 0 0 0 0 0 0 2067.6 0 0 0 0 1825 562 1796 17160 18829 18829 1 LLTQDWVQENYLEYR Unmodified 1968.9581 0.95814177 451;452 P43363;P43362;E5RH97;P43358 MAGEA10;MAGEA9;MAGEA4 Melanoma-associated antigen 10;Melanoma-associated antigen 9;Melanoma-associated antigen 4 no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 2 1 4 1 5 2 3 1 89.499 87.808 2;3 2.2229E-28 17213 Miao_Sh-c_Flag_mass3_141226_03 120.7 96.28 34895 3818.1 3811.4 1403.5 6078.2 0 771 3972 5329.2 8693.1 1018.5 0 0 1826 452;451 1797 17161;17162;17163;17164;17165;17166;17167;17168;17169;17170;17171;17172;17173;17174;17175;17176;17177;17178;17179;17180;17181 18830;18831;18832;18833;18834;18835;18836;18837;18838;18839;18840;18841;18842;18843;18844;18845;18846 18832 15 LLTVQHPLEESR Unmodified 1420.7674 0.76742787 599 Q6P3W7;F8VSC5 SCYL2 SCY1-like protein 2 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 2 2 1 49.352 49.151 3 0.0002547 6264 Miao_Sh-H9_Flag_mass3_141226_01 99.752 79.755 13803 1354.1 1667.6 0 0 0 0 2766.6 3281.8 3730.7 1002.2 0 0 1827 599 1798 17182;17183;17184;17185;17186;17187;17188;17189 18847;18848;18849;18850;18851;18852;18853;18854 18850 8 LLVGNDDVHIIAR Unmodified 1433.7991 0.79906235 600 Q7Z6Z7;Q7Z6Z7-2;Q7Z6Z7-3;H0Y5W0 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 2 1 63.673 63.706 3 0.0039028 10659 Miao_Sh-H9_Flag_mass3_141226_02 63.662 42.885 8726.9 417.54 1163.5 0 392.28 0 0 2686.1 2034.3 2033.2 0 0 0 1828 600 1799 17190;17191;17192;17193;17194;17195;17196 18855;18856;18857 18856 2 LLVGVDEK Unmodified 871.50148 0.50148335 476 P53396;P53396-2 ACLY ATP-citrate synthase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 43.792 46.75 2 0.010706 10677 Miao_Sh-H9_proteinG_mass3_141226_03 87.476 42.865 0 0 0 0 0 0 0 0 0 0 0 0 0 1829 476 1800 17197 18858 18858 1 LLVPTQYVGAIIGK Unmodified 1470.881 0.88100107 659 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 2 1 1 5 1 2 96.287 93.697 2 0.00010568 35026 Miao_Sh-c_proteinG_mass3_141226_03 82.515 65.845 9094 0 0 0 4800.9 3935.3 357.7 0 0 0 0 0 0 1830 659 1801 17198;17199;17200;17201;17202;17203;17204;17205;17206;17207;17208;17209 18859;18860;18861;18862;18863;18864;18865;18866;18867;18868;18869;18870;18871 18867 13 LLVSNLDFGVSDADIQELFAEFGTLK Unmodified 2840.4484 0.44839173 139 Q86V81;E9PB61 ALYREF THO complex subunit 4 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 2 1 4 1 3 2 2 120.11 120.65 3;4 1.6839E-86 29464 Miao_Sh-c_Flag_mass3_141226_03 179.44 161.06 747100 103300 88812 92396 210460 8631.1 0 66665 89034 87800 0 0 0 1831 139 1802 17210;17211;17212;17213;17214;17215;17216;17217;17218;17219;17220;17221;17222;17223;17224;17225 18872;18873;18874;18875;18876;18877;18878;18879;18880;18881;18882;18883;18884;18885;18886;18887;18888;18889;18890;18891;18892;18893;18894;18895;18896 18879 21 LLVVTDPR Unmodified 911.54402 0.54401687 2 P08865;C9J9K3;A6NE09 RPSA;RPSAP58 40S ribosomal protein SA yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 50.615 51.692 2 0.012496 12783 Miao_Sh-H9_proteinG_mass3_141226_01 87.639 40.558 5604.1 0 203.54 0 0 0 0 0 0 977.08 2562.3 0 1861.2 1832 2 1803 17226;17227;17228;17229 18897;18898 18898 2 LLYDTFSAFGVILQTPK Unmodified 1912.0346 0.034601177 582 Q15427;Q5SZ64 SF3B4 Splicing factor 3B subunit 4 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 107.13 108.78 3 0.04661 27490 Miao_Sh-c_proteinG_mass3_141226_01 33.872 24.336 0 0 0 0 0 0 0 0 0 0 0 0 0 1833 582 1804 17230 18899 18899 1 LLYNNVSNFGR Unmodified 1295.6622 0.66223452 535 Q00610;Q00610-2;J3KS13 CLTC Clathrin heavy chain 1 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 2 1 2 2 1 2 1 2 65.161 63.448 2 2.3866E-06 9570 Miao_Sh-c_Flag_mass3_141226_03 136.5 78.067 35846 0 0 3086.2 2235.1 0 3080.9 5966.8 6593 7327.9 4395.7 2641.3 518.99 1834 535 1805 17231;17232;17233;17234;17235;17236;17237;17238;17239;17240;17241;17242;17243;17244;17245;17246 18900;18901;18902;18903;18904;18905;18906;18907;18908;18909;18910 18901 11 LLYNRPGTVSSLK Unmodified 1446.8195 0.81946344 436 P35659;B4DFG0;P35659-2;D6RDA2;D6R9L5 DEK Protein DEK yes no 0 0 0 0 1 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 1 1 1 1 49.146 50.405 3 0.013913 12387 Miao_Sh-H9_proteinG_mass3_141226_01 57.434 6.158 28926 1882.7 2268 0 3014.8 2387 0 2825.9 3671.1 0 5998.4 3619.9 3258.3 1835 436 1806 17247;17248;17249;17250;17251;17252;17253;17254;17255 18911;18912;18913 18913 3 LMLLLEVISGER Unmodified 1371.7796 0.77957246 283;362 O43707;P35609;P35609-2;Q08043;G3V2N5;G3V5M4;P12814;P12814-2;P12814-3;P12814-4 ACTN4;ACTN2;ACTN3;ACTN1 Alpha-actinin-4;Alpha-actinin-2;Alpha-actinin-3;Alpha-actinin-1 no no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 108.52 109.02 2 0.0098522 27640 Miao_Sh-c_proteinG_mass3_141226_01 62.088 30.491 0 0 0 0 0 0 0 0 0 0 0 0 0 1836 283;362 1807 17256;17257 18914;18915 18914 2 LNAVVNDFWAEISESVDK Unmodified 2034.9898 0.98983583 637 Q99460;Q99460-2;F8WCE3;C9J9M4 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 110.86 110.51 2;3 0.0016839 26803 Miao_Sh-H9_Flag_mass3_141226_01 52.814 42.439 0 0 0 0 0 0 0 0 0 0 0 0 0 1837 637 1808 17258;17259 18916;18917 18916 2 LNDLEDALQQAK Unmodified 1356.6885 0.68850885 314 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 2 3 2 2 1 4 2 3 66.485 65.947 2;3 0 16974 Miao_Sh-c_proteinG_mass3_141226_03 309.45 234.22 669840 6021.4 6224.8 5002.9 58495 41522 128190 250.71 10871 2326.9 153710 136040 121190 + 1838 314 1809 17260;17261;17262;17263;17264;17265;17266;17267;17268;17269;17270;17271;17272;17273;17274;17275;17276;17277;17278;17279;17280;17281;17282;17283;17284;17285 18918;18919;18920;18921;18922;18923;18924;18925;18926;18927;18928;18929;18930;18931;18932;18933;18934;18935;18936;18937;18938;18939;18940;18941;18942;18943;18944;18945;18946;18947;18948;18949;18950;18951;18952;18953;18954;18955;18956;18957;18958;18959;18960;18961;18962;18963;18964;18965;18966;18967;18968;18969;18970;18971;18972;18973;18974;18975;18976;18977;18978;18979 18933 62 LNDLEEALQQAK Unmodified 1370.7042 0.70415892 108 P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 2 1 1 2 2 1 2 1 1 69.102 69.909 2;3 1.6093E-31 13230 Miao_Sh-H9_Flag_mass3_141226_01 175.48 114.84 34775 0 1008.8 0 1125.8 0 5089.5 15775 1628.5 1125.8 7569.9 0 1452.1 + 1839 108 1810 17286;17287;17288;17289;17290;17291;17292;17293;17294;17295;17296;17297;17298;17299 18980;18981;18982;18983;18984;18985;18986;18987;18988 18983 9 LNDYIFSFDK Unmodified 1260.6027 0.60265396 480 P54136;P54136-2;F5H3T8 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 80.653 81.556 2 0.011537 17161 Miao_Sh-c_proteinG_mass3_141226_01 72.34 45.554 0 0 0 0 0 0 0 0 0 0 0 0 0 1840 480 1811 17300;17301 18989;18990 18990 2 LNFSHGTHEYHAETIK Unmodified 1882.8962 0.89621022 368 P14618;P14618-2;H3BTN5;H3BQ34;H3BT25;H3BUW1;H3BTJ2 PKM Pyruvate kinase PKM;Pyruvate kinase yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 2 2 2 2 1 2 1 2 1 1 49.873 49.394 3;4 0.00030943 4460 Miao_Sh-c_Flag_mass3_141226_01 65.949 32.36 29145 2222.3 2147.6 2259.3 2287.1 2580.6 0 94.687 6347.6 810.84 4692.4 5161.8 540.56 1841 368 1812 17302;17303;17304;17305;17306;17307;17308;17309;17310;17311;17312;17313;17314;17315;17316;17317;17318 18991;18992;18993;18994;18995;18996;18997;18998;18999;19000;19001;19002;19003;19004;19005;19006;19007 18992 17 LNGTDPEDVIR Unmodified 1227.6095 0.60953025 240 O14950;P19105;J3QRS3;P24844;J3KTJ1 MYL12B;MYL12A;MYL9 Myosin regulatory light chain 12B;Myosin regulatory light chain 12A;Myosin regulatory light polypeptide 9 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5 2 2 3 2 2 2 2 3 4 2 3 50.853 52.332 2;3 1.9157E-61 6446 Miao_Sh-c_Flag_mass3_141226_01 200.67 127.41 1973000 31439 26219 21885 65606 150410 256320 72608 59927 69472 658090 327240 233820 1842 240 1813 17319;17320;17321;17322;17323;17324;17325;17326;17327;17328;17329;17330;17331;17332;17333;17334;17335;17336;17337;17338;17339;17340;17341;17342;17343;17344;17345;17346;17347;17348;17349;17350 19008;19009;19010;19011;19012;19013;19014;19015;19016;19017;19018;19019;19020;19021;19022;19023;19024;19025;19026;19027;19028;19029;19030;19031;19032;19033;19034;19035;19036;19037;19038;19039;19040;19041;19042;19043;19044;19045;19046;19047;19048;19049;19050;19051;19052;19053;19054;19055;19056;19057;19058;19059;19060 19009 52 LNILDTLSK Unmodified 1015.5914 0.59136099 559 Q13200;E9PCS3;E7EW34;H7C1H2 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 1 74.601 74.609 2 4.9123E-06 14929 Miao_Sh-H9_Flag_mass3_141226_01 135.55 40.018 22130 2842.2 0 2894.6 0 0 0 4269.4 439.54 9625.3 2059.5 0 0 1843 559 1814 17351;17352;17353;17354;17355;17356;17357 19061;19062;19063;19064;19065;19066 19064 6 LNISFPATGCQK Unmodified 1334.6653 0.66527099 512 P62753;A2A3R7 RPS6 40S ribosomal protein S6 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 1 1 61.155 63.812 2 0.0010413 17390 Miao_Sh-H9_proteinG_mass3_141226_02 87.573 66.421 2201.1 0 0 0 0 0 0 0 0 0 0 0 2201.1 1844 512 1815 17358;17359 19067;19068;19069 19067 3 LNLDSIIGR Unmodified 999.57129 0.57129425 497 P62136;E9PMD7;P62136-2;P62136-3 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 2 3 3 2 2 1 1 71.36 69.692 2 2.7021E-08 13833 Miao_Sh-c_Flag_mass3_141226_01 131.62 88.781 6237.7 0 0 204.97 548.59 0 0 493.06 2649.8 805.46 1535.9 0 0 1845 497 1816 17360;17361;17362;17363;17364;17365;17366;17367;17368;17369;17370;17371;17372;17373;17374;17375 19070;19071;19072;19073;19074;19075;19076;19077;19078;19079;19080;19081;19082 19070 13 LNLGTVGFYR Unmodified 1138.6135 0.61349341 149 P55786;E9PLK3;B7Z463;H0YCQ5 NPEPPS Puromycin-sensitive aminopeptidase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 73.549 72.847 2 0.030134 14368 Miao_Sh-H9_Flag_mass3_141226_02 58.699 33.923 0 0 0 0 0 0 0 0 0 0 0 0 0 1846 149 1817 17376 19083 19083 1 LNLVDLAGSENIGR Unmodified 1469.7838 0.78380622 473 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 2 1 83.18 78.831 2 5.8251E-14 16690 Miao_Sh-H9_Flag_mass3_141226_03 139.49 91.207 12707 2959.1 3483.2 0 0 0 0 5404.1 0 0 0 0 860.45 1847 473 1818 17377;17378;17379;17380;17381;17382 19084;19085;19086;19087;19088;19089 19089 6 LNNLVLFDK Unmodified 1074.6073 0.6073454 515 P62851 RPS25 40S ribosomal protein S25 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 3 2 1 1 1 2 3 5 1 76.261 74.959 2 5.3567E-21 19714 Miao_Sh-H9_proteinG_mass3_141226_03 169.77 111.92 426220 17787 21897 23234 45131 34583 39477 36949 28572 29382 52382 56895 39930 1848 515 1819 17383;17384;17385;17386;17387;17388;17389;17390;17391;17392;17393;17394;17395;17396;17397;17398;17399;17400;17401;17402;17403;17404;17405;17406;17407;17408 19090;19091;19092;19093;19094;19095;19096;19097;19098;19099;19100;19101;19102;19103;19104;19105;19106;19107;19108;19109;19110;19111;19112;19113;19114;19115;19116;19117;19118;19119;19120;19121;19122;19123;19124;19125 19124 36 LNQDQLDAVSK Unmodified 1229.6252 0.62518031 189 Q14444;G3V153;Q14444-2;E9PP31;E9PLA9 CAPRIN1 Caprin-1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 44.38 45.332 2 0.0029228 10865 Miao_Sh-H9_proteinG_mass3_141226_01 93.623 35.764 2196.9 0 0 0 0 0 0 0 0 0 2196.9 0 0 1849 189 1820 17409 19126 19126 1 LNQLKPGLQYK Unmodified 1300.7503 0.75032125 553 Q12906;Q12906-4;Q12906-5;Q12906-2;Q12906-6;Q12906-3;Q12906-7 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 43.103 46.06 3 0.019467 10398 Miao_Sh-H9_proteinG_mass3_141226_03 56.404 29.458 0 0 0 0 0 0 0 0 0 0 0 0 0 1850 553 1821 17410 19127 19127 1 LNTIPLFVQLLYSSVENIQR Unmodified 2346.2947 0.29473204 373 P14923 JUP Junction plakoglobin yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching 2 1 1 121.45 123.6 3 4.947E-05 33190 Miao_Sh-c_proteinG_mass3_141226_01 58.835 51.253 4211 0 0 0 0 3052.2 0 1158.7 0 0 0 0 0 1851 373 1822 17411;17412;17413;17414 19128;19129;19130 19129 2 LNTLLQR Unmodified 856.51305 0.51305109 536 Q00839;Q00839-2 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 2 1 1 1 1 46.348 47.494 2 5.1261E-05 9786 Miao_Sh-c_proteinG_mass3_141226_03 149.4 53.859 33744 861.58 0 0 0 0 11499 9325 1084.3 0 1910.8 9062.9 0 1852 536 1823 17415;17416;17417;17418;17419;17420;17421;17422 19131;19132;19133;19134;19135;19136;19137 19133 7 LNVTEQEK Unmodified 959.49238 0.49237523 333 P06733;K7EM90 ENO1 Alpha-enolase;Enolase yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 3 2 1 2 1 2 1 1 1 32.218 32.578 2 0.00744 3051 Miao_Sh-H9_Flag_mass3_141226_02 96.311 54.419 3164.8 306.54 455.12 429.4 107.37 0 0 597.7 366 0 433.66 469.03 0 1853 333 1824 17423;17424;17425;17426;17427;17428;17429;17430;17431;17432;17433;17434;17435;17436;17437 19138;19139;19140;19141;19142;19143;19144;19145 19142 8 LNWLSVDFNNWK Unmodified 1534.7569 0.75686319 24 Q15185;B4DP11;B4DDC6 PTGES3 Prostaglandin E synthase 3 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching 3 5 2 3 2 1 2 1 2 98.773 98.4 2 8.1686E-17 21419 Miao_Sh-c_Flag_mass3_141226_01 159.77 130.23 60270 12149 4187.8 537.38 8181 977.43 1971.3 14852 1285.9 16128 0 0 0 1854 24 1825 17438;17439;17440;17441;17442;17443;17444;17445;17446;17447;17448;17449;17450;17451;17452;17453;17454;17455;17456;17457;17458 19146;19147;19148;19149;19150;19151;19152;19153;19154 19146 9 LPDGYEFK Unmodified 967.4651 0.46509784 347 P09382 LGALS1 Galectin-1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 1 1 53.286 55.04 2 0.0062661 12953 Miao_Sh-c_proteinG_mass3_141226_03 99.136 63.84 23784 0 264.47 0 781.21 710.47 5621.2 1956.4 2514.8 0 7076 4859 0 1855 347 1826 17459;17460;17461;17462;17463;17464;17465;17466 19155;19156 19155 2 LPEADVAVFR Unmodified 1115.5975 0.597509 639 Q99973;Q99973-2;G3V5X7;G3V2A4 TEP1 Telomerase protein component 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 66.067 66.418 2 0.047946 18815 Miao_Sh-H9_proteinG_mass3_141226_01 50.353 20.168 0 0 0 0 0 0 0 0 0 0 0 0 0 1856 639 1827 17467 19157 19157 1 LPEDPLLSGLLDSPALK Unmodified 1776.9873 0.98731663 464 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 2 1 1 108.49 103.21 2;3 0.00093659 25377 Miao_Sh-H9_Flag_mass3_141226_03 58.275 47.329 7979.7 0 0 1695 0 0 0 0 0 3047.8 0 0 3236.8 1857 464 1828 17468;17469;17470;17471;17472;17473 19158;19159;19160;19161;19162 19161 5 LPFAAAQIGNSFR Unmodified 1390.7357 0.73573382 447 P41250 GARS Glycine--tRNA ligase yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching 1 1 2 1 1 72.782 69.586 2 0.00020631 20983 Miao_Sh-c_proteinG_mass3_141226_03 98.942 40.243 4924.7 0 0 0 2584.2 0 1882.8 0 0 0 281.44 176.23 0 1858 447 1829 17474;17475;17476;17477;17478;17479 19163;19164;19165;19166 19165 4 LPFPIIDDR Unmodified 1084.5917 0.59169534 423 P30041 PRDX6 Peroxiredoxin-6 yes yes 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 77.617 78.068 2 1.5422E-08 14304 Miao_Sh-c_Flag_mass3_141226_01 133.13 88.785 7146.7 0 2091.6 0 2190.7 0 0 2864.4 0 0 0 0 0 1859 423 1830 17480;17481;17482;17483 19167;19168;19169;19170;19171 19167 5 LPGGVQNFPQFSALR Unmodified 1629.8627 0.86272524 600 Q7Z6Z7;Q7Z6Z7-2;Q7Z6Z7-3;H0Y5W0;Q5H962 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 83.49 83.49 2 0.057276 16063 Miao_Sh-c_Flag_mass3_141226_01 41.542 33.317 933.96 933.96 0 0 0 0 0 0 0 0 0 0 0 1860 600 1831 17484 19172 19172 1 LPIFFFGTHETAFLGPK Unmodified 1921.0138 0.013806156 291 O75475;O75475-2;O75475-3 PSIP1 PC4 and SFRS1-interacting protein yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS 1 2 1 1 1 1 94.539 89.185 3 1.7657E-06 23136 Miao_Sh-c_proteinG_mass3_141226_02 79.652 61.689 9902.1 500.45 0 0 0 2357.4 1107.9 0 0 3005.9 0 0 2930.4 1861 291 1832 17485;17486;17487;17488;17489;17490;17491 19173;19174;19175;19176;19177 19173 5 LPIGDVATQYFADR Unmodified 1564.7886 0.78855725 638 Q99832;Q99832-3;F5GZK5;Q99832-4;Q99832-2;B7Z1C9 CCT7 T-complex protein 1 subunit eta yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 89.428 84.039 2 2.7005E-05 17277 Miao_Sh-c_proteinG_mass3_141226_01 85.909 76.254 3755 0 0 1492.5 0 0 0 0 0 0 2262.5 0 0 1862 638 1833 17492;17493;17494;17495;17496 19178;19179;19180;19181 19180 4 LPLQDVYK Unmodified 974.54368 0.54368251 527 P68104;Q5VTE0;Q05639 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 2 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 55.083 57.575 2 0.00066204 13563 Miao_Sh-c_proteinG_mass3_141226_03 128.38 73.671 67146 0 1727 0 3140.6 3006.9 15223 0 0 0 16900 13758 13390 1863 527 1834 17497;17498;17499;17500;17501;17502;17503 19182;19183;19184;19185;19186;19187;19188;19189;19190;19191;19192;19193;19194 19186 13 LPLQLDDAVRPEAEGEEEGR Unmodified 2222.0815 0.081504383 372 P14868;Q68CR9;C9J7S3;C9JLC1 DARS Aspartate--tRNA ligase, cytoplasmic yes no 0 0 0 0 1 By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching 1 1 2 1 1 1 64.096 65.5 3 1.1196E-08 18233 Miao_Sh-H9_proteinG_mass3_141226_02 78.78 58.223 7575.1 0 1340.2 879.09 986.47 2059.3 0 0 0 2310.1 0 0 0 1864 372 1835 17504;17505;17506;17507;17508;17509;17510 19195;19196;19197 19197 3 LPNFGFVVFDDSEPVQK Unmodified 1936.9571 0.95707914 561 Q13283;F5H4D6 G3BP1 Ras GTPase-activating protein-binding protein 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching 2 1 1 1 2 103.74 98.73 2;3 0.00060893 36937 Miao_Sh-H9_proteinG_mass3_141226_02 60.489 46.965 8785.1 0 0 0 2575.8 0 0 0 1592.8 0 1201.9 3414.6 0 1865 561 1836 17511;17512;17513;17514;17515;17516;17517 19198;19199;19200;19201;19202 19201 5 LPPLPLTLALGAFLNHR Unmodified 1842.088 0.087974152 308 O96008 TOMM40 Mitochondrial import receptor subunit TOM40 homolog yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 3 1 114.52 114.45 3 3.7642E-06 30172 Miao_Sh-H9_Flag_mass3_141226_03 76.156 61.724 2248.2 0 0 0 0 0 0 380.17 576.97 1291.1 0 0 0 1866 308 1837 17518;17519;17520;17521;17522 19203;19204;19205 19205 3 LQAALEAEEPDDER Unmodified 1584.7267 0.72674485 643 Q9BUJ2;Q9BUJ2-2;M0R247 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 3 1 43.477 46.024 2;3 1.5521E-06 5630 Miao_Sh-c_proteinG_mass3_141226_02 118.21 95.325 3131.5 0 287.13 101.26 0 2371.8 0 0 0 0 0 0 371.37 1867 643 1838 17523;17524;17525;17526;17527;17528 19206;19207;19208 19208 3 LQAEIEGLK Unmodified 999.56006 0.56006086 100 P05787;CON__P05787;P05787-2 KRT8 Keratin, type II cytoskeletal 8 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 3 2 1 1 1 2 51.694 53.406 2 0.00077859 11973 Miao_Sh-c_proteinG_mass3_141226_03 104.05 16.019 13066 0 0 0 440.68 0 563.92 657.03 1798.8 0 5970.8 0 3634.7 + 1868 100 1839 17529;17530;17531;17532;17533;17534;17535;17536;17537;17538;17539 19209;19210;19211;19212;19213;19214;19215;19216 19209 8 LQDAINILK Unmodified 1026.6073 0.6073454 449 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 58.123 63.988 2 0.035345 16103 Miao_Sh-c_proteinG_mass3_141226_03 60.828 25.473 0 0 0 0 0 0 0 0 0 0 0 0 0 1869 449 1840 17540 19217 19217 1 LQELEGAVK Unmodified 985.54441 0.5444108 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 40.609 44.051 2 0.0029405 9646 Miao_Sh-H9_proteinG_mass3_141226_03 93.096 6.3017 15744 0 0 0 588.71 0 8708.8 0 0 0 0 6446.2 0 1870 434 1841 17541;17542;17543;17544;17545 19218;19219;19220;19221 19221 4 LQEVIETLLSLEK Unmodified 1513.8603 0.86032521 262 O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 103.21 103.26 2 0.023235 25102 Miao_Sh-H9_Flag_mass3_141226_03 47.639 27.998 0 0 0 0 0 0 0 0 0 0 0 0 0 1871 262 1842 17546 19222 19222 1 LQIDEQLR Unmodified 1013.5506 0.55055881 49 P51114;P51114-2;P51114-3;E7EU85;E9PFF5;B4DXZ6;P51116;Q06787;Q06787-7;F8W871;A8MQB8;G3V0J0;Q06787-8;Q06787-6;Q06787-2;Q06787-4;Q06787-5;G8JL90;Q06787-3 FXR1;FXR2;FMR1 Fragile X mental retardation syndrome-related protein 1;Fragile X mental retardation syndrome-related protein 2;Fragile X mental retardation protein 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 2 52.746 52.997 2 6.7178E-05 13583 Miao_Sh-H9_proteinG_mass3_141226_01 141.2 49.569 5849.8 0 0 0 0 0 0 1808.3 0 0 4041.5 0 0 1872 49 1843 17547;17548;17549;17550 19223;19224;19225 19223 3 LQLDSPEDAEFIVAK Unmodified 1673.8512 0.85121708 280 O43242;B4DT72 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 79.079 78.377 2 0.036804 16358 Miao_Sh-H9_Flag_mass3_141226_02 42.818 24.241 0 0 0 0 0 0 0 0 0 0 0 0 0 1873 280 1844 17551 19226 19226 1 LQLETEIEALK Unmodified 1285.7129 0.71293269 178 P05783;F8VZY9 KRT18 Keratin, type I cytoskeletal 18 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 79.859 79.307 2 0.05476 16222 Miao_Sh-H9_Flag_mass3_141226_01 44.829 14.511 0 0 0 0 0 0 0 0 0 0 0 0 0 1874 178 1845 17552 19227 19227 1 LQLNGNLQLELAQVLAQERPK Unmodified 2374.3332 0.33324281 464 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 117.51 108.49 3 0.0053316 38337 Miao_Sh-H9_proteinG_mass3_141226_02 45.885 37.783 0 0 0 0 0 0 0 0 0 0 0 0 0 1875 464 1846 17553 19228 19228 1 LQLQLAYNWHFEVNDR Unmodified 2045.0119 0.011908675 573 Q14764 MVP Major vault protein yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 2 1 1 115.53 102.73 3 6.0923E-09 36066 Miao_Sh-H9_proteinG_mass3_141226_01 95.067 58.65 8856 0 0 0 0 0 0 0 0 0 1558.7 675.03 6622.2 1876 573 1847 17554;17555;17556;17557 19229;19230 19229 1 LQNELDNVSTLLEEAEK Unmodified 1943.9688 0.96876604 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 3 8 4 106.04 97.821 2;3 2.9312E-24 35727 Miao_Sh-H9_proteinG_mass3_141226_02 144.3 118.96 56448 415.51 0 0 0 6030.9 8679.3 4127.4 0 0 13443 9781.4 13971 1877 434 1848 17558;17559;17560;17561;17562;17563;17564;17565;17566;17567;17568;17569;17570;17571;17572;17573;17574;17575;17576;17577;17578;17579 19231;19232;19233;19234;19235;19236;19237;19238;19239;19240;19241;19242;19243;19244;19245;19246;19247;19248;19249;19250;19251;19252;19253;19254;19255;19256;19257;19258 19244 28 LQQELDDLLVDLDHQR Unmodified 1948.9854 0.98541915 433 P35579 MYH9 Myosin-9 yes yes 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 2 3 2 2 1 1 5 5 3 4 102.64 97.062 2;3 2.4094E-131 36954 Miao_Sh-H9_proteinG_mass3_141226_01 232.2 196.4 434550 0 2524.5 415.51 53403 33037 52800 18805 510.92 24746 98409 92536 57359 1878 433 1849 17580;17581;17582;17583;17584;17585;17586;17587;17588;17589;17590;17591;17592;17593;17594;17595;17596;17597;17598;17599;17600;17601;17602;17603;17604;17605;17606;17607;17608 19259;19260;19261;19262;19263;19264;19265;19266;19267;19268;19269;19270;19271;19272;19273;19274;19275;19276;19277;19278;19279;19280;19281;19282;19283;19284;19285;19286;19287;19288;19289;19290;19291;19292;19293;19294 19276 34 LQQELDDLTVDLDHQR Unmodified 1936.949 0.94903365 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 2 2 1 9 2 2 83.665 79.345 2;3 1.9668E-31 31549 Miao_Sh-H9_proteinG_mass3_141226_02 169.37 140.64 64432 0 0 0 13253 8835.6 10195 4993.8 0 0 13067 10305 3784.2 1879 434 1850 17609;17610;17611;17612;17613;17614;17615;17616;17617;17618;17619;17620;17621;17622;17623;17624;17625;17626;17627 19295;19296;19297;19298;19299;19300;19301;19302;19303;19304;19305;19306;19307;19308;19309;19310;19311;19312;19313;19314 19309 20 LQQELEFLEVQEEYIK Unmodified 2037.0306 0.030638012 453 P43686 PSMC4 26S protease regulatory subunit 6B yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 2 95.659 95.458 2 0.0040509 22095 Miao_Sh-H9_Flag_mass3_141226_02 55.546 43.169 0 0 0 0 0 0 0 0 0 0 0 0 0 1880 453 1851 17628;17629 19315;19316 19316 2 LQQLFNHTMFILEQEEYQR Unmodified 2466.2002 0.20017973 433;434 P35579;P35579-2;P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH9;MYH10 Myosin-9;Myosin-10 no no 0 0 0 0 0 By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 1 1 90.222 87.886 3 2.3414E-08 19762 Miao_Sh-H9_Flag_mass3_141226_01 81.643 72.169 5188.6 582.29 0 859.91 0 2760.3 0 0 0 427.25 0 0 558.85 1881 433;434 1852 17630;17631;17632;17633;17634;17635;17636 19317;19318;19319 19319 3 LQQLPADFGR Unmodified 1143.6037 0.60365701 629 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 2 1 1 1 55.484 58.322 2 1.5132E-06 15669 Miao_Sh-H9_proteinG_mass3_141226_01 125.75 46.278 0 0 0 0 0 0 0 0 0 0 0 0 0 1882 629 1853 17637;17638;17639;17640;17641 19320;19321;19322;19323;19324 19323 5 LQSIGTENTEENR Unmodified 1489.7009 0.70086445 219 P04075;H3BUH7;H3BPS8;H3BQN4;J3KPS3;P04075-2;H3BMQ8;H3BR04 ALDOA Fructose-bisphosphate aldolase A yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 39.946 41.174 2 0.00045629 7621 Miao_Sh-H9_proteinG_mass3_141226_03 82.85 46.53 1783.4 0 0 0 0 0 0 0 36.508 0 710.74 519.59 516.52 1883 219 1854 17642;17643;17644;17645 19325 19325 1 LQSVQALTEIQEFISFISK Unmodified 2180.1729 0.17288557 533 P78527;E7EUY0;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 3 1 122.47 123.07 2;3 2.2737E-11 32282 Miao_Sh-H9_Flag_mass3_141226_02 89.47 61.487 6706 0 0 0 0 0 0 0 6706 0 0 0 0 1884 533 1855 17646;17647;17648;17649 19326;19327;19328;19329 19327 4 LQTQVFK Unmodified 862.49125 0.49125301 459 P46781;B5MCT8;C9JM19 RPS9 40S ribosomal protein S9 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 2 1 1 1 1 1 1 41.387 43.577 2 0.013085 8987 Miao_Sh-c_proteinG_mass3_141226_03 98.997 31.962 25171 0 0 301.06 322.09 463.07 6318.4 326.19 365.26 0 6635.4 4999.7 5440 1885 459 1856 17650;17651;17652;17653;17654;17655;17656;17657;17658;17659 19330;19331;19332;19333;19334;19335 19330 6 LQVALGELR Unmodified 997.59203 0.59202969 167 P19474;F5H012;P19474-2 TRIM21 E3 ubiquitin-protein ligase TRIM21 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 64.742 66.175 2 1.4722E-39 11523 Miao_Sh-H9_Flag_mass3_141226_01 194.94 20.915 32742 9435 189.02 7605.3 0 0 493.06 15019 0 0 0 0 0 1886 167 1857 17660;17661;17662;17663;17664 19336;19337;19338;19339;19340 19340 5 LQVEEVHQLSR Unmodified 1336.7099 0.709913 651 Q9NR28;Q9NR28-2;Q9NR28-3;F5H796;F5GXT8 DIABLO Diablo homolog, mitochondrial yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 2 1 1 1 1 46.009 47.236 2;3 0.00090221 5093 Miao_Sh-c_Flag_mass3_141226_02 95.618 58.062 14394 0 1159.7 1407.5 0 0 2024.1 3324.4 3249.5 295.88 869.58 2063.1 0 1887 651 1858 17665;17666;17667;17668;17669;17670;17671;17672;17673;17674 19341;19342;19343;19344;19345;19346;19347 19343 7 LQVEKMLENLK Oxidation (M);GlyGly (K);QQTGG (K) 1944.9939 0.99387535 584 Q16206;Q16206-2 ENOX2 Ecto-NOX disulfide-thiol exchanger 2;Hydroquinone [NADH] oxidase;Protein disulfide-thiol oxidoreductase yes no 0 1 1 1 1 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 3 88.214 87.461 2 0.0014638 18841 Miao_Sh-H9_Flag_mass3_141226_01 93.162 41.593 0 0 0 0 0 0 0 0 0 0 0 0 0 1888 584 1859 17675;17676;17677 19348;19349;19350 19349 75 3 3 LQVELDNVTGLLSQSDSK Unmodified 1945.0004 0.0004005156 433 P35579 MYH9 Myosin-9 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 3 4 2 2 2 2 5 3 9 19 13 91.818 88.044 2;3 2.0098E-235 30724 Miao_Sh-H9_proteinG_mass3_141226_01 274.6 197.34 257460 19404 10025 2068.3 56340 16034 18377 22750 10923 11874 46759 24888 18023 1889 433 1860 17678;17679;17680;17681;17682;17683;17684;17685;17686;17687;17688;17689;17690;17691;17692;17693;17694;17695;17696;17697;17698;17699;17700;17701;17702;17703;17704;17705;17706;17707;17708;17709;17710;17711;17712;17713;17714;17715;17716;17717;17718;17719;17720;17721;17722;17723;17724;17725;17726;17727;17728;17729;17730;17731;17732;17733;17734;17735;17736;17737;17738;17739;17740;17741;17742;17743 19351;19352;19353;19354;19355;19356;19357;19358;19359;19360;19361;19362;19363;19364;19365;19366;19367;19368;19369;19370;19371;19372;19373;19374;19375;19376;19377;19378;19379;19380;19381;19382;19383;19384;19385;19386;19387;19388;19389;19390;19391;19392;19393;19394;19395;19396;19397;19398;19399;19400;19401;19402;19403;19404;19405;19406;19407;19408;19409;19410;19411;19412;19413;19414;19415;19416;19417;19418;19419;19420;19421;19422;19423;19424;19425;19426;19427;19428;19429;19430;19431;19432;19433;19434;19435;19436;19437;19438;19439;19440;19441;19442;19443;19444;19445;19446;19447;19448;19449;19450;19451;19452 19398 102 LQVVDQPLPVR Unmodified 1262.7347 0.73467118 464 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 65.819 61.492 2 0.030513 16689 Miao_Sh-H9_proteinG_mass3_141226_01 57.225 27.482 7059.9 0 0 0 0 0 196.24 0 0 2318.6 4545.1 0 0 1890 464 1861 17744;17745;17746 19453 19453 1 LRAEIDNVK Unmodified 1056.5928 0.59275797 105 P13647;CON__P13647;H0YI76 KRT5 Keratin, type II cytoskeletal 5 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 35.405 36.491 3 0.03278 7306 Miao_Sh-H9_proteinG_mass3_141226_03 64.064 33.328 3366.8 0 0 101.14 109.39 0 0 16.333 0 0 1267.2 974.41 898.34 + 1891 105 1862 17747;17748;17749;17750;17751;17752 19454 19454 1 LRETLNISGPPLK Unmodified 1436.8351 0.83511351 421 P28838;P28838-2;H0Y983 LAP3 Cytosol aminopeptidase yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 57.632 58.166 3 0.022833 9138 Miao_Sh-H9_Flag_mass3_141226_01 52.576 36.635 2062.3 0 0 565.21 0 0 0 536.74 0 0 960.3 0 0 1892 421 1863 17753;17754;17755 19455 19455 1 LRLEVNLQAMK Unmodified 1313.7489 0.74894104 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 104.96 90.272 3 0.0060722 31034 Miao_Sh-H9_proteinG_mass3_141226_01 79.659 25.4 2077.9 0 0 0 0 0 0 0 0 0 1618.8 0 459.02 1893 433 1864 17756;17757;17758 19456;19457 19457 2 LRLEVNLQAMK Oxidation (M) 1329.7439 0.74385566 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 1 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 85.251 73.071 3 0.03399 25701 Miao_Sh-H9_proteinG_mass3_141226_01 45.661 18.512 0 0 0 0 0 0 0 0 0 0 0 0 0 1894 433 1864 17759 19458 19458 1 LRSEENE Unmodified 875.39847 0.39847484 181 P62910;F8W727 RPL32 60S ribosomal protein L32 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 24.83 25.131 2 0.052405 5529 Miao_Sh-H9_proteinG_mass3_141226_01 104.75 69.641 2071 0 0 505.83 0 0 0 0 308.66 321.16 935.39 0 0 1895 181 1865 17760;17761;17762;17763 19459 19459 1 LRSEIDNVK Unmodified 1072.5877 0.58767259 314 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 no no 0 0 0 0 1 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 2 2 2 1 2 2 2 32.224 34.316 2;3 1.3226E-07 6909 Miao_Sh-H9_proteinG_mass3_141226_01 147.78 104.56 33816 156.04 0 143.33 866.9 1342.4 10086 0 137.55 0 8934.8 3796.4 8352.1 + 1896 314 1866 17764;17765;17766;17767;17768;17769;17770;17771;17772;17773;17774;17775;17776;17777;17778 19460;19461;19462;19463;19464;19465;19466;19467;19468 19465 9 LSDGFNGADLR Unmodified 1163.5571 0.55710075 508 P62333;H0YJC0 PSMC6 26S protease regulatory subunit 10B yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 2 55.246 55.158 2 0.003019 8169 Miao_Sh-H9_Flag_mass3_141226_03 88.275 55.727 0 0 0 0 0 0 0 0 0 0 0 0 0 1897 508 1867 17779;17780;17781;17782 19469;19470;19471;19472 19472 4 LSEELSGGR Unmodified 946.47197 0.47197413 48 P61158;B4DXW1;Q9P1U1;F5H3P5;Q9P1U1-2 ACTR3;ACTR3B Actin-related protein 3;Actin-related protein 3B yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 37.177 37.49 2 0.041579 3915 Miao_Sh-H9_Flag_mass3_141226_01 61.161 13.313 761.21 0 107.37 0 0 0 0 168.4 99.445 0 0 0 385.99 1898 48 1868 17783;17784;17785;17786 19473 19473 1 LSELEAALQR Unmodified 1128.6139 0.61388734 100 P05787;CON__P05787;P05787-2;CON__H-INV:HIT000292931;CON__Q9H552;CON__REFSEQ:XP_092267 KRT8 Keratin, type II cytoskeletal 8 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 2 1 2 1 62.443 62.643 2 2.7492E-06 10456 Miao_Sh-H9_Flag_mass3_141226_01 136.02 82.055 23418 1998.1 1453.9 1079.9 0 2170.4 159.16 4241.2 4399.8 3322.3 0 0 4593.2 + 1899 100 1869 17787;17788;17789;17790;17791;17792;17793;17794;17795;17796;17797;17798 19474;19475;19476;19477;19478;19479;19480;19481;19482;19483;19484;19485 19480 11 LSENNIQTIFAVTEEFQPVYK Unmodified 2469.2428 0.24275605 327 P05556;P05556-2;P05556-5;P05556-4;P05556-3 ITGB1 Integrin beta-1 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 2 3 2 1 109.7 108.81 3 1.3655E-09 27068 Miao_Sh-H9_Flag_mass3_141226_02 76.015 64.814 14138 2556.3 2249.8 3464.9 0 0 0 421.84 4147.1 0 0 1298 0 1900 327 1870 17799;17800;17801;17802;17803;17804;17805;17806;17807;17808 19486;19487;19488;19489;19490;19491 19491 6 LSESLKLRAMVK Oxidation (M);GlyGly (K) 1503.8443 0.84429799 211 H0YKV1 USP8 yes yes 0 1 1 0 2 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 115.32 115.54 2 0.0065188 27581 Miao_Sh-c_Flag_mass3_141226_02 63.624 6.4495 13098 0 5533 0 5011 0 0 2553.6 0 0 0 0 0 1901 211 1871 17809;17810;17811 19492 19492 25 1 LSFFFDFR Unmodified 1077.5284 0.5283668 464 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 1 2 1 1 101.86 100.39 2 5.4433E-07 38728 Miao_Sh-H9_proteinG_mass3_141226_01 126.52 88.876 17259 2146.1 0 2502.4 1609.1 2104.2 0 2193.1 2955.5 3113.2 0 0 635.24 1902 464 1872 17812;17813;17814;17815;17816;17817;17818;17819;17820;17821;17822 19493;19494;19495;19496;19497;19498;19499;19500 19500 8 LSFGLEDEPLETATK Unmodified 1648.8196 0.8195826 121 O94905;E5RHW4 ERLIN2 Erlin-2 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 77.714 78.015 2 0.0032204 15813 Miao_Sh-H9_Flag_mass3_141226_01 60.307 39.877 0 0 0 0 0 0 0 0 0 0 0 0 0 1903 121 1873 17823;17824;17825 19501;19502;19503 19502 3 LSFLYLITGNLEK Unmodified 1509.8443 0.84428121 478 P53621;P53621-2 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 113.91 109.05 2 1.3248E-06 27595 Miao_Sh-H9_Flag_mass3_141226_02 78.814 58.607 4325.7 0 439.45 541.05 0 0 843.73 0 1614.5 0 887 0 0 1904 478 1874 17826;17827;17828;17829;17830;17831 19504;19505 19505 1 LSGGGDWHIAYVLLYGPR Unmodified 1973.0159 0.015931421 6 P54578;A6NJA2;B7Z4N8;P54578-2 USP14 Ubiquitin carboxyl-terminal hydrolase 14;Ubiquitin carboxyl-terminal hydrolase yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 98.805 99.269 3 7.285E-07 22341 Miao_Sh-H9_Flag_mass3_141226_01 75.376 61.787 5416.6 0 0 1747.5 663.59 0 0 1829.8 0 1175.7 0 0 0 1905 6 1875 17832;17833;17834;17835 19506;19507 19507 2 LSGGLGAGSCR Unmodified 1033.4975 0.49747738 109 Q04695;CON__Q04695;K7EPJ9 KRT17 Keratin, type I cytoskeletal 17 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 1 1 34.769 36.724 2 0.016671 7157 Miao_Sh-H9_proteinG_mass3_141226_01 62.338 18.021 2024.1 73.219 0 116.62 0 217.76 49.703 0 0 649.61 514.98 0 402.25 + 1906 109 1876 17836;17837;17838;17839;17840;17841;17842 19508 19508 1 LSGSNPYTTVTPQIINSK Unmodified 1919 6.5851E-06 283 O43707;O43707-2;F5GXS2;O43707-3;H7C144 ACTN4 Alpha-actinin-4 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 2 3 1 64.134 65.964 2;3 4.0495E-19 18485 Miao_Sh-H9_proteinG_mass3_141226_02 129.89 108.64 23953 0 272.84 1474.2 3467 2695.9 3510.7 0 2399.8 0 5085.9 0 5046.7 1907 283 1877 17843;17844;17845;17846;17847;17848;17849;17850;17851;17852;17853;17854;17855 19509;19510;19511;19512;19513;19514;19515;19516;19517;19518;19519;19520;19521;19522;19523 19522 15 LSHETVTIELK Unmodified 1268.6976 0.69761697 506 P62314;J3QLR7 SNRPD1 Small nuclear ribonucleoprotein Sm D1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 2 1 2 2 1 1 1 2 1 60.247 60.831 2;3 0.0033336 11521 Miao_Sh-c_proteinG_mass3_141226_03 72.846 34.07 20374 0 0 979.65 856.44 2245.9 4392.3 122.35 436.09 1223.5 8816.2 0 1301.6 1908 506 1878 17856;17857;17858;17859;17860;17861;17862;17863;17864;17865;17866;17867;17868 19524;19525;19526;19527;19528;19529 19524 6 LSIVPVR Unmodified 782.50142 0.50142377 375 P15880;H0YEN5;E9PMM9;I3L404;E9PPT0;E9PM36 RPS2 40S ribosomal protein S2 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 2 2 51.724 53.985 2 0.0019734 13310 Miao_Sh-H9_proteinG_mass3_141226_03 135.87 87.75 29391 634.4 0 0 0 735.55 6275.5 2086.3 0 0 6700.3 6379.9 6579 1909 375 1879 17869;17870;17871;17872;17873;17874;17875;17876;17877;17878;17879 19530;19531;19532;19533;19534;19535;19536;19537 19537 8 LSLDDLLQR Unmodified 1071.5924 0.59242362 174 P27708;F8VPD4;H7BZB3 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 84.755 84.103 2 0.043705 17697 Miao_Sh-H9_Flag_mass3_141226_01 56.916 11.236 0 0 0 0 0 0 0 0 0 0 0 0 0 1910 174 1880 17880 19538 19538 1 LSLEFGDPASSLFR Unmodified 1537.7777 0.77765821 173 Q6L8Q7;F6T1Q0;Q6L8Q7-2 PDE12 2',5'-phosphodiesterase 12 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 95.526 95.877 2 0.01606 20170 Miao_Sh-c_Flag_mass3_141226_02 50.806 29.56 0 0 0 0 0 0 0 0 0 0 0 0 0 1911 173 1881 17881 19539 19539 1 LSLNIDPDAK Unmodified 1084.5764 0.57643921 369 P14625;H0YIV0 HSP90B1 Endoplasmin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 60.54 60.991 2 0.027021 16702 Miao_Sh-H9_proteinG_mass3_141226_01 60.641 25.373 0 0 0 0 0 0 0 0 0 0 0 0 0 1912 369 1882 17882 19540 19540 1 LSLNNGSITHLVIRPNGR Unmodified 1960.0966 0.096641358 633 Q96HS1;F5GXG4 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 64.966 65.651 4 0.041187 11348 Miao_Sh-H9_Flag_mass3_141226_01 46.249 31.26 3916.6 0 0 0 0 0 0 1197.3 0 2057.5 0 0 661.74 1913 633 1883 17883;17884;17885 19541 19541 1 LSNIFVIGK Unmodified 989.59097 0.59096706 511 P62701 RPS4X 40S ribosomal protein S4, X isoform yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 2 3 1 1 1 70.088 71.626 2 4.9123E-06 20672 Miao_Sh-H9_proteinG_mass3_141226_01 135.55 90.588 118150 0 657.03 340.45 0 15272 44502 6900.5 5422.5 1315.2 15974 11497 16265 1914 511 1884 17886;17887;17888;17889;17890;17891;17892;17893;17894;17895;17896;17897;17898;17899 19542;19543;19544;19545;19546;19547;19548;19549;19550;19551;19552 19548 11 LSRMKSVQ Oxidation (M);GlyGly (K) 1077.5601 0.56007764 120 D6RJE3;Q13257-2 MAD2L1 yes no 0 1 1 0 2 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 97.818 101.78 2 0.010333 24617 Miao_Sh-c_proteinG_mass3_141226_02 84.743 45.419 2640.2 0 0 0 0 2640.2 0 0 0 0 0 0 0 1915 120 1885 17900 19553 19553 15 1 LSSPATLNSR Unmodified 1044.5564 0.55637247 95 CON__P00761 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 2 2 1 1 1 1 2 1 1 1 2 38.383 39.567 2 1.1891E-33 7613 Miao_Sh-c_proteinG_mass3_141226_03 184.71 111.67 810190 16716 20205 18169 16143 20142 225360 19462 24538 25421 215730 545.58 207750 + 1916 95 1886 17901;17902;17903;17904;17905;17906;17907;17908;17909;17910;17911;17912;17913;17914;17915;17916 19554;19555;19556;19557;19558;19559;19560;19561;19562;19563;19564;19565;19566;19567;19568;19569;19570;19571;19572;19573;19574;19575;19576;19577;19578;19579;19580;19581;19582;19583;19584;19585;19586;19587;19588;19589;19590 19571 37 LSSPRGGMK GlyGly (K) 1045.5339 0.53386288 388 P18124;A8MUD9 RPL7 60S ribosomal protein L7 yes no 0 1 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 38.927 41.997 2 0.035928 9400 Miao_Sh-H9_proteinG_mass3_141226_02 71.379 7.9606 14935 0 0 0 0 0 3282.3 0 0 0 2380 3187.7 6084.7 1917 388 1887 17917;17918;17919;17920 19591;19592 19591 2 LSVLGAITSVQQR Unmodified 1370.7882 0.78816332 510 P62495;B7Z7P8;Q96CG1;I3L492;D6RJE8;D6RCB3 ETF1 Eukaryotic peptide chain release factor subunit 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 1 1 10 2 7 88.495 79.36 2;3 1.3891E-105 21453 Miao_Sh-c_proteinG_mass3_141226_03 225.79 129.19 80135 1628.5 0 0 19943 0 11379 644.8 0 0 15848 8005.5 22686 1918 510 1888 17921;17922;17923;17924;17925;17926;17927;17928;17929;17930;17931;17932;17933;17934;17935;17936;17937;17938;17939;17940;17941;17942;17943;17944 19593;19594;19595;19596;19597;19598;19599;19600;19601;19602;19603;19604;19605;19606;19607;19608;19609;19610;19611;19612;19613;19614;19615;19616;19617;19618;19619;19620;19621;19622;19623;19624;19625;19626;19627 19603 35 LSYNTASNK Unmodified 996.48762 0.4876242 463 P49207 RPL34 60S ribosomal protein L34 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 31.52 31.783 2 0.0054764 6028 Miao_Sh-H9_proteinG_mass3_141226_02 85.807 37.246 1817.8 0 0 0 0 0 0 0 178.78 43.271 1077.7 0 518.11 1919 463 1889 17945;17946;17947;17948;17949 19628;19629 19629 2 LTAFVNTLNGK Unmodified 1176.6503 0.65027285 481 P55036;Q5VWC4;P55036-2;A6PVX3;A2A3N6 PSMD4;PIPSL 26S proteasome non-ATPase regulatory subunit 4;Putative PIP5K1A and PSMD4-like protein yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 62.866 59.846 2 2.3219E-30 9815 Miao_Sh-H9_Flag_mass3_141226_03 173.6 117.95 19751 0 0 0 0 0 247 0 9028.2 9343.8 0 0 1132.2 1920 481 1890 17950;17951;17952;17953;17954;17955 19630;19631;19632;19633 19633 4 LTDNGTEFSVK Unmodified 1209.5877 0.58773217 473 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 49.904 49.552 2 0.0015796 6299 Miao_Sh-H9_Flag_mass3_141226_01 111.63 62.836 0 0 0 0 0 0 0 0 0 0 0 0 0 1921 473 1891 17956 19634 19634 1 LTGDLSHLAAIVILLLK Unmodified 1789.1077 0.10770654 221 P33947;H7BYF7;P33947-2 KDELR2 ER lumen protein-retaining receptor 2 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 120.68 121.03 3 0.0023622 29608 Miao_Sh-c_Flag_mass3_141226_02 53.395 48.34 0 0 0 0 0 0 0 0 0 0 0 0 0 1922 221 1892 17957 19635 19635 1 LTGMAFR Unmodified 794.41089 0.4108942 316 P04406;P04406-2;E7EUT5;O14556 GAPDH;GAPDHS Glyceraldehyde-3-phosphate dehydrogenase;Glyceraldehyde-3-phosphate dehydrogenase, testis-specific yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 50.909 50.859 2 0.017814 6942 Miao_Sh-H9_Flag_mass3_141226_03 97.071 55.569 0 0 0 0 0 0 0 0 0 0 0 0 0 1923 316 1893 17958 19636 19636 1 LTGVFAPR Unmodified 859.49159 0.49158736 511 P62701;P22090;Q8TD47;C9JEH7;A6NH36 RPS4X;RPS4Y1;RPS4Y2 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1;40S ribosomal protein S4, Y isoform 2 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 1 1 1 1 1 1 1 50.762 51.651 2 9.685E-08 12283 Miao_Sh-H9_proteinG_mass3_141226_02 153.78 84.347 50505 2297.1 1678 1755.9 0 0 0 3910.9 4559.5 0 12955 13213 10136 1924 511 1894 17959;17960;17961;17962;17963;17964;17965;17966;17967;17968;17969;17970 19637;19638;19639;19640;19641;19642;19643;19644;19645;19646;19647;19648;19649;19650;19651 19648 15 LTGVFAPRPSTGPHK Unmodified 1563.8522 0.85216056 511 P62701;P22090;Q8TD47;C9JEH7;A6NH36 RPS4X;RPS4Y1;RPS4Y2 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1;40S ribosomal protein S4, Y isoform 2 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 41.955 42.908 4 0.036507 9950 Miao_Sh-H9_proteinG_mass3_141226_01 52.372 31.126 1669.5 0 0 0 0 0 0 0 0 0 1669.5 0 0 1925 511 1895 17971 19652 19652 1 LTIAEER Unmodified 830.44978 0.44978213 511 P62701;Q8TD47 RPS4X;RPS4Y2 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 1 37.98 39.533 2 0.0095253 3978 Miao_Sh-H9_Flag_mass3_141226_03 101.64 7.3814 12484 791.84 645.09 0 0 439.42 3030.1 373.01 0 704.2 3493.5 3007 0 1926 511 1896 17972;17973;17974;17975;17976;17977;17978;17979 19653;19654;19655;19656;19657 19655 5 LTLFVNGQPR Unmodified 1143.64 0.64004252 627 Q92734;Q92734-2;C9JUE0;C9JJP5;C9JTY3 TFG Protein TFG yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 2 1 2 61.065 62.782 2 3.6664E-15 16325 Miao_Sh-H9_proteinG_mass3_141226_03 159.79 75.845 13577 0 0 0 5052.9 0 0 0 0 0 793.43 3647.6 4082.7 1927 627 1897 17980;17981;17982;17983;17984;17985;17986 19658;19659;19660;19661;19662;19663;19664;19665 19664 8 LTLFVNGQPRPLESSQVK Unmodified 2012.1055 0.10547471 627 Q92734;Q92734-2;C9JUE0;C9JJP5;C9JTY3 TFG Protein TFG yes no 0 0 0 0 1 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 3 1 1 65.858 67.475 2;3 2.6987E-11 19130 Miao_Sh-H9_proteinG_mass3_141226_01 94.922 59.885 29422 0 0 0 4957.5 0 0 0 0 0 10976 8347.3 5140.6 1928 627 1898 17987;17988;17989;17990;17991;17992 19666;19667;19668;19669;19670;19671;19672 19669 6 LTNVAVVR Unmodified 870.5287 0.52870115 678 Q9Y3A5;F8WE72 SBDS Ribosome maturation protein SBDS yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 2 1 1 1 40.032 40.182 2 0.00064859 4313 Miao_Sh-c_Flag_mass3_141226_01 129.42 82.427 1337.1 245.74 311.19 222.16 0 0 0 281.27 0 276.71 0 0 0 1929 678 1899 17993;17994;17995;17996;17997;17998 19673;19674 19673 2 LTPEEEEILNK Unmodified 1313.6715 0.6714618 499 P62241;Q5JR95 RPS8 40S ribosomal protein S8 yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 6 1 1 1 1 2 1 1 55.99 58.187 2;3 4.6605E-06 15569 Miao_Sh-H9_proteinG_mass3_141226_01 132.62 89.316 50812 0 0 0 0 6539.3 1590 3804.5 0 4011.9 16969 17897 0 1930 499 1900 17999;18000;18001;18002;18003;18004;18005;18006;18007;18008;18009;18010;18011;18012;18013 19675;19676;19677;19678;19679;19680;19681;19682;19683;19684;19685;19686;19687;19688;19689;19690;19691;19692;19693;19694;19695;19696 19691 22 LTPEELER Unmodified 985.50803 0.50802529 304 Q5H8X8;O95399;O95399-2 UTS2 Urotensin-2 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 1 1 1 1 42.691 44.538 2 5.7847E-07 5175 Miao_Sh-H9_Flag_mass3_141226_01 125.98 57.964 69113 3422.3 0 4450.4 0 885.55 12860 0 4781.8 4895.2 13344 11783 12691 1931 304 1901 18014;18015;18016;18017;18018;18019;18020;18021;18022;18023;18024 19697;19698;19699;19700;19701;19702;19703;19704;19705;19706;19707;19708;19709;19710;19711;19712;19713;19714;19715 19705 19 LTPELGLILNLNTNGLHSFLK Unmodified 2306.2998 0.29981742 664 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS 2 1 2 2 104.95 98.594 3 4.697E-27 27080 Miao_Sh-c_proteinG_mass3_141226_02 134.29 115.97 22760 0 0 0 0 6391.2 0 0 987.95 0 6782.1 0 8598.8 1932 664 1902 18025;18026;18027;18028;18029;18030;18031 19716;19717;19718;19719;19720 19716 5 LTPEYLELK Unmodified 1104.6067 0.6066767 292 O75477 ERLIN1 Erlin-1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 66.368 65.791 2 0.020962 11909 Miao_Sh-H9_Flag_mass3_141226_02 68.657 39.487 0 0 0 0 0 0 0 0 0 0 0 0 0 1933 292 1903 18032;18033 19721;19722 19721 2 LTPVSPESSSTEEK Unmodified 1489.7148 0.71478318 563 Q13501;Q13501-2;E7EMC7 SQSTM1 Sequestosome-1 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 2 2 1 1 1 38.817 38.576 2 3.0467E-09 3712 Miao_Sh-c_Flag_mass3_141226_02 128.22 102.21 3805.4 657.25 0 691.73 0 0 0 727.08 870.78 858.53 0 0 0 1934 563 1904 18034;18035;18036;18037;18038;18039;18040;18041;18042 19723;19724;19725;19726;19727;19728;19729;19730;19731;19732;19733 19726 11 LTTLLMSGCSSELKNR Unmodified 1808.9125 0.91245391 658 Q9NYY3 PLK2 Serine/threonine-protein kinase PLK2 yes yes 0 0 0 0 1 By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 1 71.26 70.415 3 0.0058685 13783 Miao_Sh-H9_Flag_mass3_141226_02 54.898 5.4497 139200 32427 21735 23712 0 0 2457.4 39876 17341 0 1652.4 0 0 1935 658 1905 18043;18044;18045;18046;18047;18048;18049 19734;19735 19735 2 LTVEDPVTVEYITR Unmodified 1633.8563 0.85630246 269 O14818;O14818-2;H0Y586 PSMA7 Proteasome subunit alpha type-7 no no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 2 2 77.345 77.069 2 2.6603E-05 15151 Miao_Sh-H9_Flag_mass3_141226_01 98.943 69.399 3445.1 2837 0 0 0 0 0 608.13 0 0 0 0 0 1936 269 1906 18050;18051;18052;18053;18054 19736;19737;19738;19739 19737 4 LTVQEEQIVELIEK Unmodified 1669.9138 0.91381734 473 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 99.776 94.964 3 0.00053002 21423 Miao_Sh-H9_Flag_mass3_141226_01 71.531 41.595 4932.9 1214.7 0 0 0 0 1340 2378.3 0 0 0 0 0 1937 473 1907 18055;18056;18057 19740 19740 1 LVAIVDVIDQNR Unmodified 1353.7616 0.76161421 126 P50914;E7EPB3 RPL14 60S ribosomal protein L14 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 2 6 5 5 4 1 4 13 3 6 85.431 81.028 2;3 2.1347E-90 16005 Miao_Sh-c_proteinG_mass3_141226_02 206.36 144.55 132090 7311.2 8839.4 4877.6 18016 5285.6 15080 11358 10186 2077.7 10760 15826 22475 1938 126 1908 18058;18059;18060;18061;18062;18063;18064;18065;18066;18067;18068;18069;18070;18071;18072;18073;18074;18075;18076;18077;18078;18079;18080;18081;18082;18083;18084;18085;18086;18087;18088;18089;18090;18091;18092;18093;18094;18095;18096;18097;18098;18099;18100;18101;18102;18103;18104;18105;18106;18107;18108;18109;18110;18111;18112 19741;19742;19743;19744;19745;19746;19747;19748;19749;19750;19751;19752;19753;19754;19755;19756;19757;19758;19759;19760;19761;19762;19763;19764;19765;19766;19767;19768;19769;19770;19771;19772;19773;19774;19775;19776;19777;19778;19779;19780;19781;19782;19783;19784;19785;19786;19787;19788;19789;19790;19791;19792;19793;19794;19795;19796;19797;19798;19799;19800;19801;19802;19803;19804;19805;19806;19807;19808;19809;19810;19811;19812;19813;19814;19815;19816;19817;19818;19819;19820;19821 19753 81 LVDISYGGENGFNQAIELSTEVLSNVK Unmodified 2895.4502 0.45018265 510 P62495;B7Z7P8;Q96CG1 ETF1 Eukaryotic peptide chain release factor subunit 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 114.23 114.88 3;4 2.1274E-19 40173 Miao_Sh-H9_proteinG_mass3_141226_01 81.97 76.893 8247.5 0 0 0 8247.5 0 0 0 0 0 0 0 0 1939 510 1909 18113;18114 19822;19823 19823 2 LVDTFLEDVK Unmodified 1177.6231 0.62305505 107 CON__P34955 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 69.255 65.094 2 0.010392 20074 Miao_Sh-c_proteinG_mass3_141226_03 73.499 45.325 0 0 0 0 0 0 0 0 0 0 0 0 0 + 1940 107 1910 18115 19824 19824 1 LVESLPQEIK Unmodified 1154.6547 0.65468953 474 P52815;B4DLN1 MRPL12 39S ribosomal protein L12, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 58.64 61.008 2 0.0059412 15065 Miao_Sh-H9_proteinG_mass3_141226_02 82.831 58.8 18426 0 0 0 0 7916.8 0 0 0 4290.3 0 2829.9 3388.8 1941 474 1911 18116;18117;18118;18119 19825 19825 1 LVGQSIIAYLQK Unmodified 1331.7813 0.78128702 478 P53621;P53621-2 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 1 1 2 1 92.441 90.286 2 0.0024348 18673 Miao_Sh-H9_Flag_mass3_141226_01 73.435 42.871 0 0 0 0 0 0 0 0 0 0 0 0 0 1942 478 1912 18120;18121;18122;18123;18124 19826;19827;19828;19829;19830 19826 5 LVIEEAER Unmodified 957.51311 0.51311067 65 P50991;B7Z9L0;P50991-2;B7Z2F4 CCT4 T-complex protein 1 subunit delta yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 3 1 1 42.551 45.293 2 0.004789 9824 Miao_Sh-H9_proteinG_mass3_141226_03 104.44 5.9788 9204.7 0 704.14 783.94 286.03 201.54 1184.1 0 0 0 0 3244 2800.9 1943 65 1913 18125;18126;18127;18128;18129;18130;18131;18132;18133 19831;19832;19833;19834;19835;19836 19835 6 LVIIEGDLER Unmodified 1155.6499 0.6499385 335;226 P06753-2;Q5VU59;P06753-5;P06753-3;P06753-4;P06753-6;Q5VU61;P06753-7;J3KN67;P06753 TPM3 Tropomyosin alpha-3 chain no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 3 1 1 7 4 3 70.109 67.42 2 2.8482E-06 11546 Miao_Sh-c_proteinG_mass3_141226_01 135.86 78.269 57781 4693.9 0 3061.7 6400.3 4007.6 7070.3 8086.8 0 6817.7 8759.5 2879.8 6003.8 1944 335;226 1914 18134;18135;18136;18137;18138;18139;18140;18141;18142;18143;18144;18145;18146;18147;18148;18149;18150;18151;18152;18153;18154;18155;18156;18157 19837;19838;19839;19840;19841;19842;19843;19844;19845;19846;19847;19848;19849;19850;19851;19852;19853;19854;19855;19856;19857;19858;19859;19860;19861;19862;19863;19864;19865;19866;19867;19868;19869 19843 33 LVIIESDLER Unmodified 1185.6605 0.66050319 212 P09493;P09493-3;H0YL52;P09493-9;P09493-4;P09493-10;H0YKX5;Q6ZN40;P09493-2;H0YNC7;F5H7S3;H7BYY1;H0YK48;B7Z596;P09493-5;P09493-8;P09493-7;P09493-6;H0YK20;H0YL42 TPM1 Tropomyosin alpha-1 chain yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 2 2 1 1 65.692 65.47 2 0.00013221 11439 Miao_Sh-c_proteinG_mass3_141226_02 128.03 91.61 15934 1841.7 1510.6 1527.6 0 3443.7 3670.7 0 0 0 3939.6 0 0 1945 212 1915 18158;18159;18160;18161;18162;18163;18164;18165;18166;18167;18168 19870;19871;19872;19873;19874;19875;19876;19877;19878;19879;19880;19881 19874 12 LVIITAGAR Unmodified 912.57565 0.57565135 309 P00338;P00338-3;P00338-2;P00338-5;F5GXY2;F5GYU2;F5GXH2 LDHA L-lactate dehydrogenase A chain yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching 1 1 50.738 52.894 2 0.017829 6530 Miao_Sh-c_proteinG_mass3_141226_02 71.614 16.083 0 0 0 0 0 0 0 0 0 0 0 0 0 1946 309 1916 18169;18170 19882;19883 19882 2 LVIKKGNTK GlyGly (K) 1113.687 0.68699271 607 Q86WP2-4 yes yes 0 1 0 0 2 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 2 1 2 2 4 49.929 50.87 2;3 1.3122E-07 9961 Miao_Sh-c_proteinG_mass3_141226_03 133.86 53.174 52589 0 0 0 1720.1 1930.7 0 0 0 472.93 38303 9934.1 228.87 1947 607 1917 18171;18172;18173;18174;18175;18176;18177;18178;18179;18180;18181;18182;18183;18184 19884;19885;19886;19887;19888;19889;19890;19891;19892;19893;19894;19895;19896;19897;19898 19885 14 15 LVILANNCPALR Unmodified 1352.7598 0.75984008 122 P62888;E5RI99;E5RJH3 RPL30 60S ribosomal protein L30 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 2 3 3 2 3 2 2 2 2 2 3 65.98 66.181 2;3 1.444E-116 16878 Miao_Sh-c_proteinG_mass3_141226_03 229.53 175.27 317830 12325 11094 10089 30012 31510 29149 19765 21951 18431 47716 52497 33289 1948 122 1918 18185;18186;18187;18188;18189;18190;18191;18192;18193;18194;18195;18196;18197;18198;18199;18200;18201;18202;18203;18204;18205;18206;18207;18208;18209;18210;18211;18212 19899;19900;19901;19902;19903;19904;19905;19906;19907;19908;19909;19910;19911;19912;19913;19914;19915 19908 17 LVILEGELER Unmodified 1169.6656 0.66558856 342;526 P07951-2;Q5TCU3;P07951-3;P07951;CON__Q3SX28;Q5TCU8;P67936-2;K7ERG3;K7ENT6;K7EPV9;K7EMU5;U3KQK2;P67936 TPM2;TPM4 Tropomyosin beta chain;Tropomyosin alpha-4 chain no no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 4 1 1 2 3 4 4 76.733 74.131 2 0.00028297 11866 Miao_Sh-c_Flag_mass3_141226_01 118.28 48.454 48056 1089.3 444.46 0 6993.2 4631.7 4699.3 0 0 15709 5430.5 4058.9 4999.7 + 1949 342;526 1919 18213;18214;18215;18216;18217;18218;18219;18220;18221;18222;18223;18224;18225;18226;18227;18228;18229;18230;18231;18232;18233;18234;18235;18236 19916;19917;19918;19919;19920;19921;19922;19923;19924;19925;19926;19927;19928;19929;19930;19931;19932;19933;19934;19935;19936;19937 19916 22 LVINGNPITIFQER Unmodified 1612.8937 0.89369102 316 P04406;P04406-2 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 4 1 1 2 4 3 4 3 2 4 97.303 92.201 2;3 1.5557E-57 19438 Miao_Sh-H9_Flag_mass3_141226_01 192.68 149.05 220840 8430.9 16831 9993.6 13683 11853 21996 23203 34335 9952.6 24576 19040 26943 1950 316 1920 18237;18238;18239;18240;18241;18242;18243;18244;18245;18246;18247;18248;18249;18250;18251;18252;18253;18254;18255;18256;18257;18258;18259;18260;18261;18262;18263;18264;18265;18266;18267 19938;19939;19940;19941;19942;19943;19944;19945;19946;19947;19948;19949;19950;19951;19952;19953;19954;19955;19956;19957;19958;19959;19960;19961;19962;19963;19964;19965;19966;19967;19968;19969;19970;19971;19972;19973;19974;19975;19976;19977;19978;19979;19980;19981;19982;19983;19984;19985;19986;19987;19988;19989;19990;19991;19992;19993;19994;19995;19996;19997;19998;19999;20000;20001;20002;20003;20004;20005;20006;20007;20008;20009;20010;20011;20012;20013;20014;20015;20016;20017;20018;20019;20020;20021;20022;20023;20024;20025;20026;20027;20028 19968 91 LVINGNPITIFQERDPSK Unmodified 2040.1004 0.10038933 316 P04406;P04406-2 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 0 0 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 1 2 2 3 1 1 2 1 1 1 90.1 88.768 3 1.1618E-13 34332 Miao_Sh-H9_proteinG_mass3_141226_01 128.59 108.06 30822 6474.7 5479.3 0 7462.6 0 0 0 912.16 0 10494 0 0 1951 316 1921 18268;18269;18270;18271;18272;18273;18274;18275;18276;18277;18278;18279;18280;18281;18282;18283;18284 20029;20030;20031;20032;20033;20034;20035;20036;20037;20038;20039;20040;20041;20042;20043;20044;20045 20043 16 LVINSGNGAVEDR Unmodified 1342.6841 0.68409218 127 P16070;H0YD13;H0Y2P0;E7EPC6;P16070-18;P16070-12;P16070-14;P16070-13;P16070-11;P16070-10;P16070-16;P16070-8;P16070-17;P16070-6;P16070-4;P16070-3;P16070-7;P16070-5;H0YE40;J3KN83 CD44 CD44 antigen yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 46.034 45.783 2 0.014317 5459 Miao_Sh-H9_Flag_mass3_141226_03 53.869 32.87 0 0 0 0 0 0 0 0 0 0 0 0 0 1952 127 1922 18285 20046 20046 1 LVIRTTHFK Unmodified 1113.6659 0.66586334 620 Q8WZ42;Q8WZ42-3;Q8WZ42-10;Q8WZ42-9;Q8WZ42-5;Q8WZ42-11;Q8WZ42-4;Q8WZ42-7;Q8WZ42-2;Q8WZ42-8;Q8WZ42-13;Q8WZ42-12 TTN Titin yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 76.81 64.63 3 0.032374 22625 Miao_Sh-H9_proteinG_mass3_141226_01 64.265 1.7183 1653.2 0 0 0 0 0 0 0 0 0 1653.2 0 0 1953 620 1923 18286 20047 20047 1 LVKPGNQNTQVTEAWNK Unmodified 1925.9959 0.99592426 669 Q9UQ80;F8VR77;H0YIN7;F8W0A3 PA2G4 Proliferation-associated protein 2G4 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 47.755 49.417 3 0.0016001 11202 Miao_Sh-H9_proteinG_mass3_141226_03 56.436 41.274 8717.3 560.17 0 0 183.13 0 3331.8 951.93 0 1248.1 0 2442.3 0 1954 669 1924 18287;18288;18289;18290;18291;18292;18293;18294 20048;20049;20050;20051;20052 20052 5 LVLDAFALPLTNLFK Unmodified 1673.9756 0.97562974 482 P55060;P55060-4;P55060-3;P55060-2 CSE1L Exportin-2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 116.62 118.67 2 0.007244 29118 Miao_Sh-H9_Flag_mass3_141226_01 57.288 48.006 1271 0 0 0 0 258.42 0 1012.6 0 0 0 0 0 1955 482 1925 18295;18296 20053 20053 1 LVLDQLR Unmodified 855.5178 0.51780212 158 Q7Z406;F2Z2U8;G8JLL9;Q7Z406-6;Q7Z406-2;Q7Z406-5;Q7Z406-4;M0QY43 MYH14 Myosin-14 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 56.114 58.813 2 0.0028584 14973 Miao_Sh-H9_proteinG_mass3_141226_03 132.96 15.261 21748 0 0 0 1598 1162.2 5640.7 2271.6 0 0 0 5532.6 5542.6 1956 158 1926 18297;18298;18299;18300;18301;18302;18303;18304 20054;20055;20056;20057;20058 20058 5 LVLEVAQHLGESTVR Unmodified 1649.9101 0.91006937 331 P06576;F8VPV9 ATP5B ATP synthase subunit beta, mitochondrial yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 2 66.601 68.566 2;3 0.0017272 12944 Miao_Sh-H9_Flag_mass3_141226_02 62.68 29.681 8536.3 2016 1394.3 0 0 2387.5 1366.4 0 0 1372.1 0 0 0 1957 331 1927 18305;18306;18307;18308;18309;18310;18311 20059;20060;20061 20060 3 LVLPSLLAALEEESWR Unmodified 1824.9986 0.99855002 626 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 115.62 115.82 3 0.0010547 29827 Miao_Sh-H9_Flag_mass3_141226_02 63.062 52.99 0 0 0 0 0 0 0 0 0 0 0 0 0 1958 626 1928 18312;18313 20062;20063 20063 2 LVLQYAPSA Unmodified 960.52803 0.52803245 251 O14579;M0QXB4;O14579-3;O14579-2 COPE Coatomer subunit epsilon yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 60.5 66.364 2 0.011343 16967 Miao_Sh-c_proteinG_mass3_141226_03 78.113 56.566 0 0 0 0 0 0 0 0 0 0 0 0 0 1959 251 1929 18314 20064 20064 1 LVLVGDGGTGK Unmodified 1014.571 0.5709599 58 P62826;B5MDF5;J3KQE5;H0YFC6 RAN GTP-binding nuclear protein Ran yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 44.61 47.156 2 0.001311 11001 Miao_Sh-H9_proteinG_mass3_141226_02 113.69 21.833 30063 0 0 0 0 0 6037.6 0 0 313.14 7999.8 9235.8 6476.9 1960 58 1930 18315;18316;18317;18318;18319 20065;20066;20067 20066 3 LVNDLVLDLLNAEDEIREEER Unmodified 2496.2708 0.27076172 562 Q13489 BIRC3 Baculoviral IAP repeat-containing protein 3 yes yes 0 0 0 0 1 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 111.16 111.16 3 1.329E-27 25490 Miao_Sh-c_Flag_mass3_141226_01 111.45 93.125 0 0 0 0 0 0 0 0 0 0 0 0 0 1961 562 1931 18320 20068 20068 1 LVNELTEFAK Unmodified 1162.6234 0.6233894 99 CON__P02769 yes yes 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 1 1 1 66.701 68.19 2 0.0016588 19312 Miao_Sh-H9_proteinG_mass3_141226_01 101.5 52.708 54454 0 3837.5 3660.7 0 4201.8 2906.6 7735.5 8137.7 7598.8 7254.9 4781.8 4338.8 + 1962 99 1932 18321;18322;18323;18324;18325;18326;18327;18328;18329;18330 20069;20070;20071;20072;20073;20074;20075;20076;20077;20078;20079;20080;20081;20082;20083;20084 20081 16 LVNHFVEEFK Unmodified 1260.6503 0.65027285 343 P08107;P08107-2;E7EP94;V9GZ37 HSPA1A Heat shock 70 kDa protein 1A/1B yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 2 1 1 1 56.983 58.782 3 0.00083426 9626 Miao_Sh-H9_Flag_mass3_141226_02 110.08 70.455 15551 1245.3 1137.3 1341.4 1142.6 0 1886.8 0 2518.4 5854.9 0 423.98 0 1963 343 1933 18331;18332;18333;18334;18335;18336;18337;18338;18339 20085;20086;20087;20088;20089;20090;20091;20092 20091 8 LVNLQHLDLLNNK Unmodified 1532.8675 0.86747627 629 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 74.161 74.546 3 0.012624 13323 Miao_Sh-c_Flag_mass3_141226_02 50.467 20.262 11585 0 1108.6 998.38 2524 0 0 0 3164 1839.3 1950.5 0 0 1964 629 1934 18340;18341;18342;18343;18344;18345;18346 20093;20094;20095;20096 20093 4 LVPGGGATEIELAK Unmodified 1353.7504 0.75038083 469 P50990;P50990-2;P50990-3 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 1 1 1 1 1 1 1 58.709 60.072 2 0.0002396 9515 Miao_Sh-H9_Flag_mass3_141226_03 76.759 40.335 40390 2520.7 2072.6 1882.4 3117.8 2800.2 5163.5 4184.7 4858.1 0 6229.1 0 7560.5 1965 469 1935 18347;18348;18349;18350;18351;18352;18353;18354;18355;18356;18357;18358 20097;20098;20099;20100 20098 4 LVPSVNGVR Unmodified 939.55016 0.55016488 358 P11586;F5H2F4 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 39.455 45.821 2 0.021768 9706 Miao_Sh-c_proteinG_mass3_141226_03 67.897 22.816 0 0 0 0 0 0 0 0 0 0 0 0 0 1966 358 1936 18359 20101 20101 1 LVPTGLDFGQEGFTR Unmodified 1635.8257 0.82567103 455 P46087;P46087-2;P46087-4;P46087-3 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 80.479 79.206 2 0.0026348 16473 Miao_Sh-c_proteinG_mass3_141226_01 62.861 46.723 9468.2 0 1369.3 0 1573 1740.9 0 0 0 3039.2 1745.7 0 0 1967 455 1937 18360;18361;18362;18363;18364;18365 20102;20103 20102 2 LVPVGYGIK Unmodified 944.5695 0.56950333 405 P24534 EEF1B2 Elongation factor 1-beta yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 1 1 1 1 1 54.514 56.045 2 0.047512 8164 Miao_Sh-H9_Flag_mass3_141226_01 59.35 11.434 42729 2380.5 2216.9 0 1987.9 1816.3 6353 3209.9 3285.8 3291.2 6869.6 4906.7 6411.7 1968 405 1938 18366;18367;18368;18369;18370;18371;18372;18373;18374;18375;18376 20104;20105 20104 2 LVQAFQFTDK Unmodified 1195.6237 0.62372375 545 Q06830 PRDX1 Peroxiredoxin-1 yes yes 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 1 1 1 1 3 3 1 67.329 66.209 2 2.7669E-17 18279 Miao_Sh-H9_proteinG_mass3_141226_01 152.7 99.98 33730 328.14 1601.3 2340 4682.3 0 0 4074.8 3979.3 3639.8 516.67 6830.3 5737.3 1969 545 1939 18377;18378;18379;18380;18381;18382;18383;18384;18385;18386;18387;18388;18389;18390;18391;18392;18393;18394 20106;20107;20108;20109;20110;20111;20112;20113;20114;20115;20116;20117;20118;20119;20120;20121;20122;20123 20119 18 LVQDVANNTNEEAGDGTTTATVLAR Unmodified 2559.2413 0.2412525 354 P10809;E7ESH4;E7EXB4;B7Z712;C9JL25 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 1 2 1 2 2 1 1 1 57.331 59.366 3 4.3031E-41 9313 Miao_Sh-H9_Flag_mass3_141226_01 119.45 108.47 27908 3525 0 3310.3 0 0 7451.1 0 0 6575.7 0 0 7046.3 1970 354 1940 18395;18396;18397;18398;18399;18400;18401;18402;18403;18404;18405;18406;18407;18408;18409 20124;20125;20126;20127;20128;20129;20130;20131;20132;20133;20134;20135;20136;20137;20138;20139 20132 16 LVRPPVQVYGIEGR Unmodified 1581.8991 0.89911075 462 P48047;H7C086 ATP5O ATP synthase subunit O, mitochondrial yes no 0 0 0 0 1 By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 2 1 1 60.878 62.263 3 2.5391E-06 10575 Miao_Sh-H9_Flag_mass3_141226_02 120.9 106.45 15037 2052.9 1522.2 0 2646.3 0 347.71 2342.7 2958.1 0 0 1765.7 1401 1971 462 1941 18410;18411;18412;18413;18414;18415;18416;18417;18418;18419 20140;20141;20142;20143;20144;20145;20146;20147 20145 7 LVSESSDVLPK Unmodified 1172.6289 0.62886871 100 P05787;CON__P05787;P05787-2 KRT8 Keratin, type II cytoskeletal 8 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 2 1 2 50.439 51.266 2 0.0013129 12321 Miao_Sh-H9_proteinG_mass3_141226_01 113.67 71.48 6268.3 400.64 0 0 0 0 0 472.76 0 0 4715.8 679.07 0 + 1972 100 1942 18420;18421;18422;18423;18424;18425;18426;18427 20148;20149;20150;20151;20152;20153 20149 6 LVSIGAEEIVDGNAK Unmodified 1513.7988 0.79878758 283 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 2 2 2 5 1 2 1 5 2 6 69.98 65.937 2;3 5.7129E-16 22398 Miao_Sh-H9_proteinG_mass3_141226_01 145.69 98.813 51733 1647.4 1806.5 0 4260.3 0 8435.8 2984.2 3850.6 4515.6 12457 8638.8 3136.7 1973 283 1943 18428;18429;18430;18431;18432;18433;18434;18435;18436;18437;18438;18439;18440;18441;18442;18443;18444;18445;18446;18447;18448;18449;18450;18451;18452;18453;18454;18455;18456 20154;20155;20156;20157;20158;20159;20160;20161;20162;20163;20164;20165;20166;20167;20168;20169;20170;20171;20172;20173;20174 20165 21 LVTDLTK Unmodified 788.46437 0.46436956 99 CON__P02769;P02768;H0YA55;CON__P02768-1;C9JKR2;D6RHD5;B7WNR0;P02768-2 ALB Serum albumin yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 2 1 1 1 1 1 38.796 40.53 2 0.024111 3943 Miao_Sh-c_Flag_mass3_141226_03 77.282 21.841 4520.5 432.4 462.88 96.754 0 0 1006 0 0 574.2 0 1037.9 910.37 + 1974 99 1944 18457;18458;18459;18460;18461;18462;18463;18464;18465 20175;20176;20177;20178 20176 4 LVTLPVSFAQLK Unmodified 1314.7911 0.79112343 629 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching 1 1 2 1 1 3 1 1 90.056 89.668 2 0.0033191 33904 Miao_Sh-c_proteinG_mass3_141226_03 71.085 42.181 18011 2497.1 1754.1 2965.8 3882.5 2904.4 0 0 3591.1 0 416.17 0 0 1975 629 1945 18466;18467;18468;18469;18470;18471;18472;18473;18474;18475;18476 20179;20180;20181;20182;20183;20184;20185 20183 7 LVVEVANGR Acetyl (Protein N-term) 997.55564 0.55564418 14 Q9BSV6;B0V3J0;E7EQB3 TSEN34 tRNA-splicing endonuclease subunit Sen34 yes no 1 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 38.338 39.809 2 0.0035259 8927 Miao_Sh-H9_proteinG_mass3_141226_01 82.279 39.41 9275.5 0 0 0 0 0 0 0 0 547.56 0 5142.5 3585.4 1976 14 1946 18477;18478;18479;18480 20186;20187;20188 20187 3 LVVSTQTALA Unmodified 1001.5757 0.57571092 99 CON__P02769 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 1 57.608 60.165 2 0.022753 14596 Miao_Sh-c_proteinG_mass3_141226_03 64.064 48.432 7266.9 0 1320.9 0 0 359.83 4622.8 0 0 963.34 0 0 0 + 1977 99 1947 18481;18482;18483;18484 20189 20189 1 LVWIPSER Unmodified 998.55492 0.5549159 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4;E7ERA5 MYH10 Myosin-10 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 2 2 1 1 2 2 1 1 65.38 66.169 2 9.9143E-05 11599 Miao_Sh-c_proteinG_mass3_141226_01 140.09 62.807 43564 2117.1 1790 2167.7 7083.9 5432 4346.7 4472.3 0 8002.1 4541.3 1315.2 2296.1 1978 434 1948 18485;18486;18487;18488;18489;18490;18491;18492;18493;18494;18495;18496;18497;18498;18499 20190;20191;20192;20193;20194;20195;20196;20197;20198;20199;20200 20192 11 LVWVPSDK Unmodified 942.51747 0.51746776 433 P35579;Q5BKV1;B1AH99 MYH9 Myosin-9 yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1 1 56.383 58.032 2 0.00018778 13941 Miao_Sh-c_proteinG_mass3_141226_03 138.54 88.418 178430 4405 0 0 10678 8451.8 30911 8812.1 10600 10234 37021 29948 27372 1979 433 1949 18500;18501;18502;18503;18504;18505;18506;18507;18508;18509 20201;20202;20203;20204;20205;20206;20207;20208;20209;20210;20211;20212;20213;20214;20215;20216;20217;20218;20219;20220;20221;20222;20223;20224 20209 24 LWTLVSEQTR Unmodified 1231.6561 0.65608651 145 P46776;E9PJD9;E9PLL6 RPL27A 60S ribosomal protein L27a yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 1 2 3 2 1 1 3 3 3 70.618 70.848 2 4.6005E-34 17668 Miao_Sh-c_proteinG_mass3_141226_03 172.27 110.71 95252 7155.3 5443.9 1223.5 14179 12850 1664.6 8450.5 7271.5 8814.5 11158 7254.8 9785.7 1980 145 1950 18510;18511;18512;18513;18514;18515;18516;18517;18518;18519;18520;18521;18522;18523;18524;18525;18526;18527;18528;18529;18530;18531;18532;18533;18534;18535 20225;20226;20227;20228;20229;20230;20231;20232;20233;20234;20235;20236;20237;20238;20239;20240;20241;20242;20243;20244;20245;20246;20247;20248;20249;20250;20251 20235 27 LYDIDVAK Unmodified 935.4964 0.49639797 9 P62750;H7BY10;K7EJV9;K7ERT8;A8MUS3;K7EMA7 RPL23A 60S ribosomal protein L23a yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 2 56.248 56.305 2 0.00022806 13851 Miao_Sh-H9_proteinG_mass3_141226_02 137.84 64.595 150840 0 0 0 3327.4 3598.3 36403 0 0 0 41443 30420 35646 1981 9 1951 18536;18537;18538;18539;18540;18541;18542;18543;18544 20252;20253;20254;20255;20256;20257;20258;20259;20260;20261;20262;20263;20264 20260 13 LYGDADYLEER Unmodified 1342.6041 0.60411052 40 P17812;B4DR64 CTPS1 CTP synthase 1 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 58.728 60.131 2 0.035032 8431 Miao_Sh-c_Flag_mass3_141226_03 50.354 36.953 0 0 0 0 0 0 0 0 0 0 0 0 0 1982 40 1952 18545 20265 20265 1 LYGPSSVSFADDFVR Unmodified 1658.794 0.79403655 468 P50454;E9PJH8;E9PIG2;E9PRS3;E9PNX1;E9PK86;E9PMI5;E9PR70;E9PPV6;E9PQ34 SERPINH1 Serpin H1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching 1 2 2 90.445 87.688 2 0.0036953 18186 Miao_Sh-c_proteinG_mass3_141226_02 58.814 43.826 0 0 0 0 0 0 0 0 0 0 0 0 0 1983 468 1953 18546;18547;18548;18549;18550 20266;20267;20268;20269;20270 20268 5 LYGSAGPPPTGEEDTAEK Unmodified 1817.8319 0.8319382 355 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6 8 6 1 1 3 4 9 4 4 5 44.549 45.105 2;3 1.1715E-67 10378 Miao_Sh-H9_proteinG_mass3_141226_02 147.08 115.2 50864 1773.9 2481 3992.6 0 0 1659.2 5934 11253 7746.7 7046.5 8976.4 0 1984 355 1954 18551;18552;18553;18554;18555;18556;18557;18558;18559;18560;18561;18562;18563;18564;18565;18566;18567;18568;18569;18570;18571;18572;18573;18574;18575;18576;18577;18578;18579;18580;18581;18582;18583;18584;18585;18586;18587;18588;18589;18590;18591;18592;18593;18594;18595;18596;18597;18598;18599;18600;18601 20271;20272;20273;20274;20275;20276;20277;20278;20279;20280;20281;20282;20283;20284;20285;20286;20287;20288;20289;20290;20291;20292;20293;20294;20295;20296;20297;20298;20299;20300;20301;20302;20303;20304;20305;20306;20307;20308;20309;20310;20311;20312;20313;20314;20315;20316;20317;20318;20319;20320;20321;20322;20323;20324;20325;20326;20327;20328;20329;20330;20331;20332;20333;20334;20335;20336;20337;20338;20339;20340;20341;20342;20343;20344;20345;20346;20347;20348;20349;20350;20351;20352;20353;20354 20349 83 LYGSAGPPPTGEEDTAEKDEL Unmodified 2174.9855 0.98553831 355 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 0 1 By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 1 58.23 58.489 2;3 2.6946E-13 8206 Miao_Sh-c_Flag_mass3_141226_01 91.589 73.176 10690 2211.8 2260.2 3145.4 0 0 0 0 977 1137.2 958.24 0 0 1985 355 1955 18602;18603;18604;18605;18606;18607;18608 20355;20356;20357;20358;20359 20355 4 LYIGLAGLATDVQTVAQR Unmodified 1888.0418 0.04181182 230 P49720;J3KSM3;J3KRR2;J3QKR3 PSMB3 Proteasome subunit beta type-3 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 97.619 97.845 3 7.4172E-07 22264 Miao_Sh-H9_Flag_mass3_141226_01 79.317 52.546 0 0 0 0 0 0 0 0 0 0 0 0 0 1986 230 1956 18609;18610 20360;20361 20361 2 LYIGNLNESVTPADLEK Unmodified 1874.9626 0.96255845 659 Q9NZI8;Q9NZI8-2 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 81.521 77.945 2;3 1.5041E-09 16076 Miao_Sh-c_proteinG_mass3_141226_01 94.203 64.291 0 0 0 0 0 0 0 0 0 0 0 0 0 1987 659 1957 18611;18612;18613 20362;20363;20364 20363 3 LYLINSPVVR Unmodified 1172.6917 0.69174374 229 P41252;J3KR24 IARS Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 2 1 1 1 71.846 71.373 2 0.0076961 11935 Miao_Sh-c_Flag_mass3_141226_01 76.228 36.923 8539.3 0 2551.2 0 0 488.09 1432.1 510.48 496.83 2040.7 1019.8 0 0 1988 229 1958 18614;18615;18616;18617;18618;18619;18620;18621;18622 20365;20366;20367 20365 3 LYQTDPSGTYHAWK Unmodified 1665.7787 0.77872084 269 O14818;O14818-2;H0Y586 PSMA7 Proteasome subunit alpha type-7 no no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 52.791 52.791 3 1.2539E-05 6396 Miao_Sh-c_Flag_mass3_141226_01 108.66 78.894 0 0 0 0 0 0 0 0 0 0 0 0 0 1989 269 1959 18623 20368 20368 1 LYRPGSVAYVSR Unmodified 1366.7357 0.73573382 476 P53396;P53396-2;B4E3P0 ACLY ATP-citrate synthase yes no 0 0 0 0 1 By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 1 1 47.311 48.163 3 0.00053065 5811 Miao_Sh-H9_Flag_mass3_141226_01 106.79 80.668 7384.3 563.7 0 726.98 286 0 0 1044.5 1129.2 1197.7 0 936.01 1500.2 1990 476 1960 18624;18625;18626;18627;18628;18629;18630;18631 20369;20370;20371;20372;20373 20370 5 LYSPSQIGAFVLMK Oxidation (M) 1568.8273 0.82725094 441 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 1 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 2 2 1 1 3 3 2 97.033 92.134 2;3 0.0012734 19995 Miao_Sh-c_proteinG_mass3_141226_01 70.889 40.325 33923 333.12 1901.4 0 7378.4 4025.9 2303.1 767.69 0 0 7501.4 7149.8 2562.2 1991 441 1961 18632;18633;18634;18635;18636;18637;18638;18639;18640;18641;18642;18643;18644;18645;18646;18647;18648 20374;20375;20376;20377;20378;20379;20380;20381;20382;20383;20384;20385;20386 20375 60 13 LYSPSQIGAFVLMK Unmodified 1552.8323 0.83233632 441 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 1 3 2 2 1 1 1 1 1 1 100.5 98.074 2;3 0.00019681 22189 Miao_Sh-c_proteinG_mass3_141226_01 81.908 44.728 34823 0 0 1384.6 8036.1 8226 0 865.18 790.26 1520 7586.6 5178.9 1235.2 1992 441 1961 18649;18650;18651;18652;18653;18654;18655;18656;18657;18658;18659;18660;18661;18662 20387;20388;20389;20390;20391;20392;20393;20394;20395;20396;20397;20398;20399;20400 20387 14 LYSTWIGGSILASLDTFK Unmodified 1971.0353 0.035329459 47 P61163;F5H3I4;B4DXP9;P42025 ACTR1A;ACTR1B Alpha-centractin;Beta-centractin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 114.94 114.59 2 0.00036284 28319 Miao_Sh-H9_Flag_mass3_141226_01 59.733 53.256 0 0 0 0 0 0 0 0 0 0 0 0 0 1993 47 1962 18663 20401 20401 1 LYTLVTYVPVTTFK Unmodified 1643.9174 0.91744615 518 P62899;P62899-3;P62899-2;H7C2W9;C9JU56;B7Z4E3;B7Z4C8 RPL31 60S ribosomal protein L31 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 5 3 5 2 2 2 3 6 99.169 94.954 2;3 4.2298E-58 21101 Miao_Sh-H9_Flag_mass3_141226_02 197.25 173.32 508460 36759 0 37705 68431 17778 62072 29575 61505 29488 82708 67676 14768 1994 518 1963 18664;18665;18666;18667;18668;18669;18670;18671;18672;18673;18674;18675;18676;18677;18678;18679;18680;18681;18682;18683;18684;18685;18686;18687;18688;18689;18690;18691;18692;18693;18694;18695;18696;18697;18698;18699 20402;20403;20404;20405;20406;20407;20408;20409;20410;20411;20412;20413;20414;20415;20416;20417;20418;20419;20420;20421;20422;20423;20424;20425;20426;20427;20428;20429;20430;20431;20432;20433;20434;20435;20436;20437;20438;20439;20440;20441;20442;20443;20444;20445;20446;20447;20448;20449;20450;20451;20452;20453;20454;20455;20456;20457;20458;20459;20460;20461;20462;20463;20464;20465;20466;20467;20468;20469;20470;20471;20472;20473;20474;20475;20476;20477;20478;20479;20480;20481;20482;20483;20484;20485;20486;20487;20488;20489;20490;20491;20492;20493;20494 20445 93 LYVIGGSNNDAGYR Unmodified 1497.7212 0.72120596 60 Q53GT1;B7Z2G1;H7BZZ5 KLHL22 Kelch-like protein 22 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 1 55.662 56.472 2 0.051492 8118 Miao_Sh-c_proteinG_mass3_141226_01 44.511 21.87 4457.9 0 187.95 0 384.9 260.25 0 1470.3 1773.2 381.3 0 0 0 1995 60 1964 18700;18701;18702;18703;18704;18705 20495 20495 1 MAAPWWR Acetyl (Protein N-term);Oxidation (M) 974.44326 0.44325696 631 Q96DV4 MRPL38 39S ribosomal protein L38, mitochondrial yes yes 1 0 1 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 79.128 81.07 2 0.013642 16685 Miao_Sh-c_proteinG_mass3_141226_01 72.021 27.49 33995 0 2283.1 3921.9 16146 11644 0 0 0 0 0 0 0 1996 631 1965 18706;18707;18708;18709 20496 20496 81 1 MALVQALVPR Acetyl (Protein N-term);Oxidation (M) 1154.6482 0.64816436 621 Q8WZ69 C11orf40 Putative uncharacterized protein C11orf40 yes yes 1 0 1 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 110.66 93.465 3 0.0147 34881 Miao_Sh-H9_proteinG_mass3_141226_03 50.805 10.081 7586.5 0 0 0 0 0 0 0 0 0 0 0 7586.5 1997 621 1966 18710 20497;20498;20499;20500 20498 80 4 MATEVAADALGEEWK Oxidation (M) 1635.745 0.74503745 512 P62753;A2A3R7;A2A3R5 RPS6 40S ribosomal protein S6 yes no 0 0 1 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 66.091 66.342 2 0.0019772 12976 Miao_Sh-H9_Flag_mass3_141226_02 63.31 52.312 3622.1 0 0 0 0 0 0 313.19 1219.1 372.18 1216.3 501.39 0 1998 512 1967 18711;18712;18713;18714;18715 20501 20501 64 1 MAVTFIGNSTAIQELFK Unmodified 1868.9706 0.97062071 338 P07437;Q5JP53;Q5ST81;E9PBJ4 TUBB Tubulin beta chain yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 110.76 103.66 3 0.0049609 25513 Miao_Sh-c_proteinG_mass3_141226_02 48.423 38.577 13186 0 0 0 0 1352.7 0 3612.4 0 0 3674.1 1535.4 3011.6 1999 338 1968 18716;18717;18718;18719;18720 20502 20502 1 MAVTFIGNSTAIQELFK Oxidation (M) 1884.9655 0.96553533 338 P07437;Q5JP53;Q5ST81;E9PBJ4 TUBB Tubulin beta chain yes no 0 0 1 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 2 1 99.244 98.993 2;3 9.001E-18 23784 Miao_Sh-H9_Flag_mass3_141226_02 127.62 115.1 5471.1 0 2166.9 0 0 0 0 3304.2 0 0 0 0 0 2000 338 1968 18721;18722;18723;18724;18725 20503;20504;20505;20506 20504 47 4 MDELQLFR Oxidation (M) 1066.5117 0.51173046 483 P55072;C9JUP7;C9IZA5 VCP Transitional endoplasmic reticulum ATPase yes no 0 0 1 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 1 1 68.461 69.682 2 0.0010395 11657 Miao_Sh-c_Flag_mass3_141226_02 119.21 79.548 24572 1591.6 1687.6 1447.2 0 733.98 668.1 4377.9 8005.6 6059.7 0 0 0 2001 483 1969 18726;18727;18728;18729;18730;18731;18732;18733 20507;20508;20509;20510;20511;20512 20508 62 6 MDELQLFR Unmodified 1050.5168 0.51681584 483 P55072;C9JUP7;C9IZA5 VCP Transitional endoplasmic reticulum ATPase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 82.421 75.354 2 0.00029062 14843 Miao_Sh-H9_Flag_mass3_141226_01 136.75 90.737 5331.9 964.94 0 0 0 0 353.7 2539.5 0 0 807.96 665.79 0 2002 483 1969 18734;18735;18736;18737;18738 20513 20513 1 MDKVEDELKEK Oxidation (M);2 GlyGly (K) 1606.7509 0.75085111 203 Q14683;H0Y7K8 SMC1A Structural maintenance of chromosomes protein 1A yes no 0 2 1 0 2 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 53.202 54.555 2 0.048379 7157 Miao_Sh-c_proteinG_mass3_141226_01 53.211 24.587 0 0 0 0 0 0 0 0 0 0 0 0 0 2003 203 1970 18739 20514 20514 23 1 MDKVEDELKEK Oxidation (M);GlyGly (K) 1492.7079 0.70792366 203 Q14683;H0Y7K8 SMC1A Structural maintenance of chromosomes protein 1A yes no 0 1 1 0 2 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 40.436 46.802 2 0.0039591 9998 Miao_Sh-c_proteinG_mass3_141226_03 75.229 12.045 0 0 0 0 0 0 0 0 0 0 0 0 0 2004 203 1970 18740 20515 20515 23 1 MEHSVCPSSAVHLIPVSTPK Acetyl (Protein N-term);Oxidation (M) 2233.0871 0.087123808 616 Q8TE99-2 yes yes 1 0 1 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 51.767 52.205 4 0.0070001 6190 Miao_Sh-c_Flag_mass3_141226_02 44.391 14.811 184160 48306 69549 0 1997.2 0 0 64304 0 0 0 0 0 2005 616 1971 18741;18742;18743;18744 20516 20516 79 1 MELITILEK Acetyl (Protein N-term) 1130.6257 0.62569758 574 Q14974;J3QR48 KPNB1 Importin subunit beta-1 yes no 1 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 116.78 116.53 2 0.030621 28966 Miao_Sh-H9_Flag_mass3_141226_01 47.894 31.74 0 0 0 0 0 0 0 0 0 0 0 0 0 2006 574 1972 18745 20517 20517 1 MELQEIQLK Unmodified 1130.6005 0.60054547 335;226 P06753-2;Q5VU59;P06753-5;P06753-3;P06753-4;P06753-6;Q5VU61;P06753-7;J3KN67;P06753 TPM3 Tropomyosin alpha-3 chain no no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 63.016 65.446 2 0.014845 16892 Miao_Sh-c_proteinG_mass3_141226_03 73.841 35.049 2809.4 0 0 0 0 0 2129.2 0 680.25 0 0 0 0 2007 335;226 1973 18746;18747 20518 20518 1 MFVGGLSWDTSK Oxidation (M) 1342.6227 0.62273747 115 Q99729-3;D6R9P3;D6RD18;D6RBZ0;Q99729-2;Q99729;Q99729-4 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B yes no 0 0 1 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 67.535 69.048 2 0.0036141 12833 Miao_Sh-c_proteinG_mass3_141226_02 74.987 48.201 19298 0 0 0 5389.6 7489.3 0 0 2281.2 749.55 0 3388.7 0 2008 115 1974 18748;18749;18750;18751;18752 20519;20520;20521 20519 14 3 MGSAVMDTKK Oxidation (M);2 GlyGly (K) 1310.5959 0.59587079 187 Q9UGJ0;F8WDA1 PRKAG2 5'-AMP-activated protein kinase subunit gamma-2 yes no 0 2 1 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 4 1 1 3 3 65.92 63.919 2 0.0055006 23448 Miao_Sh-H9_proteinG_mass3_141226_02 62.463 23.589 205270 527.56 0 0 0 389.25 57021 0 1060 0 14386 69724 62164 2009 187 1975 18753;18754;18755;18756;18757;18758;18759;18760;18761;18762;18763;18764;18765;18766 20522;20523;20524;20525;20526;20527;20528;20529;20530;20531;20532;20533;20534;20535 20530 22 14 MKEKQDK Oxidation (M);2 GlyGly (K) 1149.5448 0.5448215 369 P14625;Q58FF3 HSP90B1;HSP90B2P Endoplasmin;Putative endoplasmin-like protein yes no 0 2 1 0 2 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 2 1 1 1 1 47.467 50.014 2 0.053844 10712 Miao_Sh-c_proteinG_mass3_141226_03 73.039 7.7867 9763.5 0 0 0 0 0 543.49 843.67 0 0 679.07 463.32 7233.9 2010 369 1976 18767;18768;18769;18770;18771;18772 20536;20537 20536 2 MKETAENYLGHTAK Unmodified 1591.7664 0.7664416 441 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 37.069 40.711 3 0.017666 7682 Miao_Sh-c_proteinG_mass3_141226_03 52.372 45.09 4899.4 0 0 0 0 0 2453.9 0 0 0 0 1335.8 1109.7 2011 441 1977 18773;18774;18775 20538 20538 1 MKETAENYLGHTAK Oxidation (M) 1607.7614 0.76135622 441 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 1 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 33.905 35.409 3 0.037105 7550 Miao_Sh-H9_proteinG_mass3_141226_01 56.793 43.785 1693.8 0 0 0 0 0 0 0 0 0 1294.2 0 399.61 2012 441 1977 18776;18777 20539 20539 1 MLKQMLFR 2 Oxidation (M);QQTGG (K) 1568.7803 0.78031752 51 Q99436;Q5TBG5;B4E0P1 PSMB7 Proteasome subunit beta type-7;Proteasome subunit beta type yes no 0 0 2 1 1 By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 58.517 58.851 3 0.026957 8360 Miao_Sh-c_Flag_mass3_141226_01 48.423 16.009 10838 4468.6 0 0 341.25 0 0 6027.7 0 0 0 0 0 2013 51 1978 18778;18779;18780 20540;20541 20540 7;8 2 MLVSLKMSYKAAAGEDYK Acetyl (Protein N-term);Oxidation (M);2 GlyGly (K) 2290.0974 0.097354143 401 P23381;G3V4S4;G3V313;G3V339;G3V2C0;G3V4C7;G3V4N8;G3V4N0;G3V5W1;G3V3S7;G3V3X0;G3V423;G3V3P2;G3V227;G3V5U1;G3V456;G3V2Y7;G3V277;G3V3H8;G3V3Y5 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes no 1 2 1 0 2 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 50.943 52.847 3 0.011335 6243 Miao_Sh-c_Flag_mass3_141226_03 40.493 15.575 46127 0 0 44343 0 0 0 0 0 0 0 1783.5 0 2014 401 1979 18781;18782 20542 20542 53 0 MNLASSFVNGFVNAAFGQDK Oxidation (M) 2131.9997 0.99968901 559 Q13200;E9PCS3;E7EW34 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 1 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 111.55 111.37 3 0.032564 26956 Miao_Sh-H9_Flag_mass3_141226_01 42.348 36.075 2630.4 0 0 0 0 0 0 1074.4 1556 0 0 0 0 2015 559 1980 18783;18784 20543 20543 71 1 MNVLADALK Unmodified 973.52665 0.52665224 217 P62244;I3L3P7;I3L246;H3BN98;H3BV27;H3BT37;I3L303 RPS15A 40S ribosomal protein S15a yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 60.707 66.572 2 0.04408 17015 Miao_Sh-c_proteinG_mass3_141226_03 60.398 33.144 1359.7 0 0 0 0 0 1359.7 0 0 0 0 0 0 2016 217 1981 18785 20544 20544 1 MQEEMIKALK 2 Oxidation (M);2 GlyGly (K) 1479.7061 0.70614953 27 P16591;B4DDX7;P16591-2 FER Tyrosine-protein kinase Fer yes no 0 2 2 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 3 4 1 2 1 2 1 2 75.041 75.171 2 0.001113 15104 Miao_Sh-H9_Flag_mass3_141226_03 89.047 66.497 372930 70456 40794 9058 516.52 0 0 93081 80034 78996 0 0 0 2017 27 1982 18786;18787;18788;18789;18790;18791;18792;18793;18794;18795;18796;18797;18798;18799;18800;18801;18802;18803 20545;20546;20547;20548;20549;20550;20551;20552;20553;20554;20555;20556;20557;20558;20559;20560;20561;20562;20563;20564;20565;20566;20567;20568;20569;20570;20571;20572;20573;20574;20575 20570 4;5 31 MQIFVKTLTGK GlyGly (K) 1378.7643 0.76425675 45 P0CG47;P62979;P62987;J3QS39;J3QTR3;F5H6Q2;F5GYU3;F5H2Z3;F5H265;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q96C32;F5H041;P0CG48;M0R1V7;F5GZ39;J3QSA3 UBB;RPS27A;UBA52;UBC Polyubiquitin-B;Ubiquitin;Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-C;Ubiquitin yes no 0 1 0 0 1 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 64.91 64.559 3 0.0056784 11125 Miao_Sh-H9_Flag_mass3_141226_01 91.961 67.536 0 0 0 0 0 0 0 0 0 0 0 0 0 2018 45 1983 18804 20576 20576 4 1 MQQNIQELEEQLEEEESAR Unmodified 2332.0489 0.048883626 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 3 1 1 1 1 1 88.514 86.164 3 1.1731E-56 18400 Miao_Sh-c_proteinG_mass3_141226_01 172.6 151.33 17486 1268.4 0 3277.6 450.76 3903.9 2117.5 0 773.98 2204.9 3489 0 0 2019 433 1984 18805;18806;18807;18808;18809;18810;18811;18812;18813;18814 20577;20578;20579;20580 20577 4 MQQNIQELEEQLEEEESAR Oxidation (M) 2348.0438 0.043798248 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 1 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 2 2 1 85.73 82.004 3 1.189E-62 28793 Miao_Sh-H9_proteinG_mass3_141226_02 180.39 135.56 17043 0 0 0 0 0 0 1318.3 2405.8 5173.9 2559.5 5585.6 0 2020 433 1984 18815;18816;18817;18818;18819;18820;18821;18822 20581;20582;20583;20584;20585;20586;20587 20586 58 6 MRPFEGFQR Oxidation (M) 1182.5604 0.56041199 643 Q9BUJ2;Q9BUJ2-2;B7Z4B8;Q9BUJ2-4;M0R3F1;Q9BUJ2-3 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes no 0 0 1 0 1 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 1 76.125 67.817 3 0.025092 26113 Miao_Sh-c_proteinG_mass3_141226_03 54.982 42.935 3659.4 0 0 0 697.77 0 1008.3 0 0 0 1318.6 634.8 0 2021 643 1985 18823;18824;18825;18826 20588;20589 20589 82 0 MSGECAPNVSVSVSTSHTTISGGGSR Oxidation (M) 2580.1544 0.1544281 314 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 1 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 3 1 2 50.606 52.16 3 3.7088E-56 6579 Miao_Sh-c_proteinG_mass3_141226_02 127.16 119.71 3315.8 0 0 0 3315.8 0 0 0 0 0 0 0 0 + 2022 314 1986 18827;18828;18829;18830;18831;18832;18833 20590;20591;20592;20593;20594;20595;20596;20597 20593 39 8 MSGECAPNVSVSVSTSHTTISGGGSR Unmodified 2564.1595 0.15951348 314 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS 2 1 52.613 54.501 3 1.8196E-13 7158 Miao_Sh-c_proteinG_mass3_141226_01 71.12 65.993 0 0 0 0 0 0 0 0 0 0 0 0 0 + 2023 314 1986 18834;18835;18836 20598;20599;20600 20599 3 MSVQPTVSLGGFEITPPVVLR Oxidation (M) 2242.2031 0.20313984 334 P06748;P06748-2;P06748-3;E5RI98 NPM1 Nucleophosmin yes no 0 0 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 6 7 1 1 5 2 1 4 1 103.06 99.635 2;3 6.1801E-51 23838 Miao_Sh-H9_Flag_mass3_141226_03 163.68 145.33 319660 11470 22132 4624.6 69759 43301 21165 0 29426 30068 26056 33675 27980 2024 334 1987 18837;18838;18839;18840;18841;18842;18843;18844;18845;18846;18847;18848;18849;18850;18851;18852;18853;18854;18855;18856;18857;18858;18859;18860;18861;18862;18863;18864;18865;18866;18867 20601;20602;20603;20604;20605;20606;20607;20608;20609;20610;20611;20612;20613;20614;20615;20616;20617;20618;20619;20620;20621;20622;20623;20624;20625;20626;20627;20628;20629;20630;20631;20632;20633;20634;20635;20636;20637;20638;20639;20640;20641;20642;20643;20644;20645;20646;20647;20648;20649;20650;20651;20652;20653;20654;20655;20656;20657;20658;20659;20660;20661;20662;20663;20664;20665;20666 20646 44 66 MSVQPTVSLGGFEITPPVVLR Unmodified 2226.2082 0.20822522 334 P06748;P06748-2;P06748-3;E5RI98 NPM1 Nucleophosmin yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 2 1 1 2 1 2 1 1 2 110.02 102.28 2;3;4 3.3322E-16 24795 Miao_Sh-H9_Flag_mass3_141226_02 95.122 80.846 36518 568.8 0 0 747.71 0 2678.6 16112 0 0 1034.6 9276.3 6100.3 2025 334 1987 18868;18869;18870;18871;18872;18873;18874;18875;18876;18877;18878;18879;18880;18881;18882 20667;20668;20669;20670;20671;20672;20673;20674;20675;20676;20677;20678 20675 10 MTDQEAIQDLWQWR Oxidation (M) 1834.8308 0.83083277 334 P06748;P06748-2 NPM1 Nucleophosmin yes no 0 0 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching 2 2 5 2 2 1 1 1 4 1 93.973 93.136 2;3 6.3977E-13 21754 Miao_Sh-c_proteinG_mass3_141226_01 148.18 134.23 66410 3969.5 4421.8 6550.5 18569 17646 207.23 0 5388 8142.8 0 0 1514.9 2026 334 1988 18883;18884;18885;18886;18887;18888;18889;18890;18891;18892;18893;18894;18895;18896;18897;18898;18899;18900;18901;18902;18903 20679;20680;20681;20682;20683;20684;20685;20686;20687;20688;20689;20690;20691;20692;20693;20694;20695;20696;20697;20698;20699;20700;20701 20688 45 23 MTDQEAIQDLWQWR Unmodified 1818.8359 0.83591814 334 P06748;P06748-2 NPM1 Nucleophosmin yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 1 1 3 3 1 1 1 2 2 1 99.037 97.195 2;3 1.73E-25 24238 Miao_Sh-c_proteinG_mass3_141226_01 166.64 139.82 57099 6032.5 2567.5 4186.2 21653 8745.4 1025.7 6122.1 0 4027.5 1678.1 1060.5 0 2027 334 1988 18904;18905;18906;18907;18908;18909;18910;18911;18912;18913;18914;18915;18916;18917;18918;18919;18920;18921 20702;20703;20704;20705;20706;20707;20708;20709;20710;20711;20712;20713;20714;20715;20716;20717;20718;20719 20707 18 MTEEECR Oxidation (M) 969.35318 0.35318091 17 Q13698;B1ALM3 CACNA1S Voltage-dependent L-type calcium channel subunit alpha-1S yes no 0 0 1 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 69.324 68.948 2 0.02421 13716 Miao_Sh-H9_Flag_mass3_141226_02 64.776 59.297 1736 0 0 0 0 0 0 0 1192.4 543.64 0 0 0 2028 17 1989 18922;18923 20720 20720 1 0 MTKAMAAEWLR Oxidation (M);GlyGly (K) 1436.6904 0.69043988 252 M0QXL3 yes yes 0 1 1 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 5 5 5 1 4 5 1 1 80.737 80.272 2 0.0067597 15925 Miao_Sh-H9_Flag_mass3_141226_01 81.799 34.438 2628500 617960 239000 233170 410.89 0 0 869700 151990 513940 0 0 2369.6 2029 252 1990 18924;18925;18926;18927;18928;18929;18930;18931;18932;18933;18934;18935;18936;18937;18938;18939;18940;18941;18942;18943;18944;18945;18946;18947;18948;18949;18950 20721;20722;20723;20724;20725;20726;20727;20728;20729;20730;20731;20732;20733;20734;20735 20728 33;34 14 MTKAMAAEWLR 2 Oxidation (M);GlyGly (K) 1452.6854 0.6853545 252 M0QXL3 yes yes 0 1 2 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 4 3 3 2 1 5 4 2 1 3 3 76.227 75.949 2 0.016601 12623 Miao_Sh-c_Flag_mass3_141226_02 54.198 13.47 596670 4026.2 59594 50508 107840 26195 0 40374 124660 57225 59723 43333 23186 2030 252 1990 18951;18952;18953;18954;18955;18956;18957;18958;18959;18960;18961;18962;18963;18964;18965;18966;18967;18968;18969;18970;18971;18972;18973;18974;18975;18976;18977;18978;18979;18980;18981;18982;18983 20736;20737;20738;20739;20740;20741;20742;20743;20744;20745;20746;20747;20748;20749;20750;20751;20752;20753;20754;20755 20736 33;34 18 MTLDDFR Unmodified 896.4062 0.40620276 432 P35527;CON__P35527;K7EQQ3 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 62.115 60.524 2 0.045439 16646 Miao_Sh-H9_proteinG_mass3_141226_01 73.26 40.79 4202.7 0 0 0 0 658.7 231.49 0 0 0 3097.8 214.72 0 + 2031 432 1991 18984;18985;18986;18987 20756 20756 1 MTLDDFR Oxidation (M) 912.40112 0.40111738 432 P35527;CON__P35527;K7EQQ3 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 1 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 45.777 48.797 2 0.036672 11095 Miao_Sh-H9_proteinG_mass3_141226_02 60.972 45.473 6223.6 0 0 0 0 0 2157.4 0 0 193.47 0 2098 1774.8 + 2032 432 1991 18988;18989;18990;18991 20757 20757 0 MTNGFSGADLTEICQR Oxidation (M) 1814.7927 0.7927327 483 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 1 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 64.506 65.747 2 6.3547E-05 12117 Miao_Sh-H9_Flag_mass3_141226_03 73.498 65.373 3464.5 0 661.86 0 0 0 0 0 0 1818.5 0 716.79 267.33 2033 483 1992 18992;18993;18994;18995 20758;20759;20760 20760 63 2 MTNGFSGADLTEICQR Unmodified 1798.7978 0.79781808 483 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 69.922 69.47 2 0.0054867 12957 Miao_Sh-H9_Flag_mass3_141226_01 53.565 43.434 0 0 0 0 0 0 0 0 0 0 0 0 0 2034 483 1992 18996 20761 20761 1 MVIITGPPEAQFK Unmodified 1429.7639 0.7639224 659 Q9NZI8;Q9NZI8-2;O00425-2 IGF2BP1;IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 1;Insulin-like growth factor 2 mRNA-binding protein 3 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 71.477 71.527 2 0.023866 20888 Miao_Sh-H9_proteinG_mass3_141226_01 47.47 34.787 0 0 0 0 0 0 0 0 0 0 0 0 0 2035 659 1993 18997 20762 20762 1 MVNHFIAEFK Oxidation (M) 1250.6118 0.61177885 356 P11142;E9PKE3;P11142-2;A8K7Q2;E9PN89 HSPA8 Heat shock cognate 71 kDa protein yes no 0 0 1 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 1 3 56.785 57.079 2;3 0.0091003 8622 Miao_Sh-H9_Flag_mass3_141226_03 85.813 56.856 28447 1973.7 2159.9 2715 3230.2 0 0 3950.6 4976.6 9441.3 0 0 0 2036 356 1994 18998;18999;19000;19001;19002;19003;19004;19005;19006;19007 20763;20764;20765;20766;20767;20768;20769;20770;20771 20769 49 9 MVNHFIAEFK Unmodified 1234.6169 0.61686423 356 P11142;E9PKE3;P11142-2;A8K7Q2;E9PN89 HSPA8 Heat shock cognate 71 kDa protein yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 1 60.745 61.513 3 0.01232 9789 Miao_Sh-c_proteinG_mass3_141226_01 60.064 33.175 9097.3 1005.9 940.02 0 2024.1 1668.8 0 0 1748 1710.5 0 0 0 2037 356 1994 19008;19009;19010;19011;19012;19013 20772;20773;20774 20772 3 NAAIAVLEELK Unmodified 1169.6656 0.66558856 305 O95793;Q5JW30;O95793-2;O95793-3;Q5JW28 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 2 106.19 94.006 2 0.014612 33532 Miao_Sh-H9_proteinG_mass3_141226_01 63.091 40.45 0 0 0 0 0 0 0 0 0 0 0 0 0 2038 305 1995 19014;19015 20775;20776 20775 2 NAAQELATLLLSLPAPASVQQQSK Unmodified 2477.349 0.34895246 594 Q5T4S7;Q5T4S7-3;Q5T4S7-4;Q5T4S7-2;X6RE05 UBR4 E3 ubiquitin-protein ligase UBR4 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 115.01 114.66 3 0.00063586 28345 Miao_Sh-H9_Flag_mass3_141226_01 46.176 37.892 0 0 0 0 0 0 0 0 0 0 0 0 0 2039 594 1996 19016 20777 20777 1 NAEPLINLDVNNPDFK Unmodified 1811.9054 0.90537792 670 Q9Y224;G3V4C6;H0YJB9 C14orf166 UPF0568 protein C14orf166 yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 3 3 1 3 1 3 6 86.897 81.567 2;3 4.9008E-09 29405 Miao_Sh-H9_proteinG_mass3_141226_03 99.392 76.03 21802 0 0 2019.6 6181 6215.1 2160.6 0 409.8 0 1908 0 2908.1 2040 670 1997 19017;19018;19019;19020;19021;19022;19023;19024;19025;19026;19027;19028;19029;19030;19031;19032;19033;19034;19035;19036 20778;20779;20780;20781;20782;20783;20784;20785;20786;20787;20788;20789;20790;20791 20789 14 NAFACFDEEATGTIQEDYLR Unmodified 2349.0219 0.021940594 240 O14950;P19105;J3QRS3 MYL12B;MYL12A Myosin regulatory light chain 12B;Myosin regulatory light chain 12A yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 2 103.73 94.585 3 8.9554E-23 34206 Miao_Sh-H9_proteinG_mass3_141226_01 119.38 111.94 0 0 0 0 0 0 0 0 0 0 0 0 0 2041 240 1998 19037;19038;19039;19040 20792;20793;20794;20795 20795 4 NAFASVILFGTNNSSSISGVWVFR Unmodified 2572.3074 0.30742199 417 P26641;B4DTG2 EEF1G Elongation factor 1-gamma yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 113.07 112.67 3 0.051413 27644 Miao_Sh-H9_Flag_mass3_141226_01 25.421 18.289 0 0 0 0 0 0 0 0 0 0 0 0 0 2042 417 1999 19041 20796 20796 1 NAGVEGSLIVEK Unmodified 1214.6507 0.65066678 354 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 2 2 50.938 52.98 2 3.1856E-05 12389 Miao_Sh-H9_proteinG_mass3_141226_03 90.412 51.63 14406 567.06 0 1318.5 0 380.66 2736.1 635.04 0 385.42 993.75 0 7389.8 2043 354 2000 19042;19043;19044;19045;19046;19047;19048;19049;19050;19051;19052 20797;20798;20799;20800 20800 3 NAIANASTLAEVER Unmodified 1457.7474 0.74742071 215 P09661;H0YMA0;H0YLR3 SNRPA1 U2 small nuclear ribonucleoprotein A' yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 2 1 58.908 59.609 2 0.00071277 15833 Miao_Sh-H9_proteinG_mass3_141226_02 76.82 55.045 14936 0 167.55 797.85 3279.1 0 0 0 1102.9 674.19 1308.8 7606 0 2044 215 2001 19053;19054;19055;19056;19057;19058;19059;19060 20801;20802 20802 2 NALQQENHIIDGVK Unmodified 1577.8162 0.81616898 192 Q9GZT3;H0YJ40;G3V4X6;G3V2S9;Q9GZT3-2;H0YJW7 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 2 1 53.123 54.197 3 0.006088 14062 Miao_Sh-H9_proteinG_mass3_141226_01 55.724 36.065 5938 587.08 0 0 743.85 262.26 0 1118.6 897.29 0 400.88 1928.1 0 2045 192 2002 19061;19062;19063;19064;19065;19066;19067;19068 20803;20804 20803 2 NAPAIIFIDELDAIAPK Unmodified 1809.9877 0.98765098 483 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 2 2 3 3 5 1 1 115.08 114.2 2;3 2.3539E-27 26511 Miao_Sh-c_Flag_mass3_141226_01 154.74 133.7 111170 3431.1 27901 24541 3621.9 0 0 15102 18991 17553 0 0 27.908 2046 483 2003 19069;19070;19071;19072;19073;19074;19075;19076;19077;19078;19079;19080;19081;19082;19083;19084;19085;19086;19087 20805;20806;20807;20808;20809;20810;20811;20812;20813;20814;20815;20816;20817;20818;20819;20820;20821;20822;20823;20824;20825;20826;20827;20828;20829;20830;20831;20832;20833;20834;20835;20836;20837;20838;20839;20840;20841;20842;20843;20844 20808 40 NAQLLKMLQEGEMKDK Oxidation (M) 1890.9543 0.95431872 596 Q5VSY0;Q5VSY0-2 GKAP1 G kinase-anchoring protein 1 yes no 0 0 1 0 2 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 82.569 78.976 3 0.018904 26553 Miao_Sh-H9_proteinG_mass3_141226_01 47.774 12.737 13391 4103.1 0 1457 0 0 0 0 0 0 7830.9 0 0 2047 596 2004 19088;19089;19090 20845 20845 77 1 NAVEEYVYEFR Unmodified 1417.6514 0.65139506 625 Q92598;Q92598-2;Q92598-3;Q92598-4;B4DY72 HSPH1 Heat shock protein 105 kDa yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 80.558 80.207 2 0.0036758 16501 Miao_Sh-H9_Flag_mass3_141226_01 102.4 70.803 0 0 0 0 0 0 0 0 0 0 0 0 0 2048 625 2005 19091;19092;19093;19094 20846;20847;20848;20849 20847 4 NAVITVPAYFNDSQR Unmodified 1693.8424 0.84238373 441 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 4 3 4 4 3 2 6 14 3 78.341 75.441 2;3 6.8072E-111 27774 Miao_Sh-H9_proteinG_mass3_141226_02 221.24 194.71 452760 6222.3 3172.1 2077.9 85720 59499 0 8497.3 7556.5 3547.3 131700 36281 108490 2049 441 2006 19095;19096;19097;19098;19099;19100;19101;19102;19103;19104;19105;19106;19107;19108;19109;19110;19111;19112;19113;19114;19115;19116;19117;19118;19119;19120;19121;19122;19123;19124;19125;19126;19127;19128;19129;19130;19131;19132;19133;19134;19135;19136;19137;19138;19139;19140;19141;19142 20850;20851;20852;20853;20854;20855;20856;20857;20858;20859;20860;20861;20862;20863;20864;20865;20866;20867;20868;20869;20870;20871;20872;20873;20874;20875;20876;20877;20878;20879;20880;20881;20882;20883;20884;20885;20886;20887;20888;20889;20890;20891;20892;20893;20894;20895;20896;20897;20898;20899;20900;20901;20902;20903;20904;20905;20906;20907;20908;20909;20910;20911;20912;20913;20914;20915;20916;20917;20918;20919;20920;20921;20922;20923;20924;20925;20926;20927;20928;20929;20930;20931;20932;20933;20934;20935;20936;20937 20902 88 NCAAYLK Unmodified 838.40072 0.40072345 433;434;158 P35579;P35579-2;P35580;P35580-3;P35580-2;F8W6L6;P35580-4;Q7Z406;F2Z2U8;G8JLL9;Q7Z406-6;Q7Z406-2;Q7Z406-5;Q7Z406-4;M0QY43 MYH9;MYH10;MYH14 Myosin-9;Myosin-10;Myosin-14 no no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 34.261 35.414 2 0.038227 3430 Miao_Sh-c_proteinG_mass3_141226_01 70.912 39.623 0 0 0 0 0 0 0 0 0 0 0 0 0 2050 433;434;158 2007 19143 20938 20938 1 NCAVEFNFGQR Unmodified 1340.5932 0.59316868 643 Q9BUJ2;Q9BUJ2-2;B7Z4B8;Q9BUJ2-4;M0R3F1;Q9BUJ2-3;M0QYZ0 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 1 1 2 2 2 62.416 64.705 2;3 9.9354E-12 18013 Miao_Sh-H9_proteinG_mass3_141226_01 114.86 90.009 50639 423.8 0 0 8515.1 6029.4 2237 0 0 0 2347.3 17680 13407 2051 643 2008 19144;19145;19146;19147;19148;19149;19150;19151;19152;19153;19154 20939;20940;20941;20942;20943;20944;20945;20946;20947 20943 7 NCLLLLTYLISELEAAR Unmodified 1991.0761 0.076148416 612 Q8NCA5;Q8NCA5-2;E9PH82 FAM98A Protein FAM98A yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 121.28 121.68 3 0.00011944 29866 Miao_Sh-c_Flag_mass3_141226_01 68.41 51.17 10002 3523.9 1109.1 4133.9 0 0 0 0 0 1235.5 0 0 0 2052 612 2009 19155;19156;19157;19158 20948;20949;20950 20949 3 NDEELNK Unmodified 860.38758 0.3875758 320;376 Q6FI13;P0C0S8;Q9BTM1;Q16777;Q99878;Q93077;Q7L7L0;P04908;Q96KK5;P20671;H0YFX9;Q9BTM1-2;P16104;Q96QV6;Q8IUE6 HIST2H2AA3;HIST1H2AG;H2AFJ;HIST2H2AC;HIST1H2AJ;HIST1H2AC;HIST3H2A;HIST1H2AB;HIST1H2AH;HIST1H2AD;H2AFX;HIST1H2AA;HIST2H2AB Histone H2A type 2-A;Histone H2A type 1;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-J;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A type 1-H;Histone H2A type 1-D;Histone H2A;Histone H2AX;Histone H2A type 1-A;Histone H2A type 2-B no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 25.755 27.672 2 0.045532 5109 Miao_Sh-H9_proteinG_mass3_141226_03 73.208 36.366 2404.3 0 0 0 0 0 805.09 28.778 0 0 0 896.37 674.02 2053 320;376 2010 19159;19160;19161;19162 20951 20951 1 NDLAVVDVR Unmodified 999.53491 0.53490874 389 P19338 NCL Nucleolin yes yes 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1 51.593 53.719 2 5.2501E-08 12263 Miao_Sh-c_proteinG_mass3_141226_03 149.33 60.285 27377 1075.1 214.08 635.39 669.56 341.61 7888.9 0 0 0 877.94 8054 7620.7 2054 389 2011 19163;19164;19165;19166;19167;19168;19169;19170;19171 20952;20953;20954;20955;20956;20957;20958;20959;20960 20954 9 NELESYAYSLK Unmodified 1315.6296 0.62959699 355 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 2 2 6 2 67.382 68.74 2;3 7.7199E-22 18174 Miao_Sh-c_proteinG_mass3_141226_03 163.71 117.65 259270 2465.6 24625 22471 13181 12494 23250 40452 45648 44102 15815 1735.7 13027 2055 355 2012 19172;19173;19174;19175;19176;19177;19178;19179;19180;19181;19182;19183;19184;19185;19186;19187;19188;19189;19190;19191;19192;19193;19194;19195;19196;19197;19198;19199 20961;20962;20963;20964;20965;20966;20967;20968;20969;20970;20971;20972;20973;20974;20975;20976;20977;20978;20979;20980;20981;20982;20983;20984;20985;20986;20987;20988;20989;20990;20991;20992;20993;20994;20995;20996;20997;20998;20999;21000;21001;21002;21003;21004;21005;21006;21007;21008;21009;21010;21011;21012;21013 20993 53 NELSGALTGLTR Unmodified 1230.6568 0.65681479 130 P26639;E7ERI3;G3XAN9;P26639-2 TARS Threonine--tRNA ligase, cytoplasmic yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 69.516 69.415 2 0.0033903 19960 Miao_Sh-H9_proteinG_mass3_141226_01 80.371 35.507 3905.8 0 0 0 0 0 0 2050.4 0 0 1855.3 0 0 2056 130 2013 19200;19201 21014 21014 1 NEPASADDFLPTLIYIVLK Unmodified 2118.1249 0.12487275 131 Q9UJ41;E9PFK9;E7ERJ8;Q9UJ41-2;Q9UJ41-4;Q9UJ41-3 RABGEF1 Rab5 GDP/GTP exchange factor yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 119.92 120.17 3 0.0037789 30816 Miao_Sh-H9_Flag_mass3_141226_01 47.618 43.623 2878.3 0 0 0 0 0 0 1675 0 1203.2 0 0 0 2057 131 2014 19202;19203 21015 21015 1 NESLQPSLQSPQTELR Unmodified 1825.917 0.91700524 60 Q53GT1;B7Z2G1;C9J191 KLHL22 Kelch-like protein 22 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 59.505 59.956 2 0.00061391 16279 Miao_Sh-H9_proteinG_mass3_141226_01 67.251 51.737 0 0 0 0 0 0 0 0 0 0 0 0 0 2058 60 2015 19204 21016 21016 1 NFAFLEFR Unmodified 1042.5236 0.52361577 413 P26368;P26368-2;K7ENG2 U2AF2 Splicing factor U2AF 65 kDa subunit yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 91.334 89.972 2 0.01398 19957 Miao_Sh-c_proteinG_mass3_141226_01 85.676 53.205 11035 1241.4 1936.1 0 3337.6 0 0 1984.9 2183.5 0 0 351.39 0 2059 413 2016 19205;19206;19207;19208;19209;19210 21017;21018;21019;21020 21018 4 NFEHLIPDAPELIHDFLVNEK Unmodified 2489.2591 0.25907482 477 P53618;E9PP73 COPB1 Coatomer subunit beta yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 120.96 112.41 4 0.030899 27432 Miao_Sh-H9_Flag_mass3_141226_02 29.447 16.08 1505.6 0 0 0 0 0 0 0 1481.8 0 0 0 23.782 2060 477 2017 19211;19212 21021 21021 1 NFGIGQDIQPK Unmodified 1215.6248 0.62478638 509 P62424;Q5T8U3 RPL7A 60S ribosomal protein L7a yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 3 1 1 1 1 3 2 2 2 1 56.679 57.962 2;3 9.5539E-15 14926 Miao_Sh-H9_proteinG_mass3_141226_02 150.51 113.17 177900 4764.6 7998.9 0 6120.2 6044.6 26807 7570.6 8994.2 6788.9 39610 32955 30248 2061 509 2018 19213;19214;19215;19216;19217;19218;19219;19220;19221;19222;19223;19224;19225;19226;19227;19228;19229;19230;19231;19232 21022;21023;21024;21025;21026;21027;21028;21029;21030;21031;21032;21033;21034;21035;21036;21037;21038;21039;21040;21041;21042;21043;21044;21045;21046;21047;21048;21049;21050;21051 21048 30 NFGIWLR Unmodified 904.49192 0.49192172 258 Q02543;M0R3D6;M0R1A7;M0R117;M0R0P7 RPL18A 60S ribosomal protein L18a yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 2 1 1 2 1 1 1 1 2 85.391 82.763 2 0.0034937 16597 Miao_Sh-c_proteinG_mass3_141226_02 128.48 71.938 43219 3188.8 5738.9 3227.5 7343.6 5970.8 2028.3 3608.1 5032.2 4561.7 2519.6 0 0 2062 258 2019 19233;19234;19235;19236;19237;19238;19239;19240;19241;19242;19243;19244;19245 21052;21053;21054;21055;21056;21057;21058;21059;21060 21054 9 NFILDQTNVSAAAQR Unmodified 1646.8376 0.8376327 536 Q00839;Q00839-2 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 5 2 1 2 2 2 2 2 2 3 64.351 65.922 2;3 3.7087E-130 16830 Miao_Sh-c_proteinG_mass3_141226_03 232.28 161.34 103510 2711.5 1676.1 0 0 5969.8 16670 8722.1 8300 0 24611 17926 16925 2063 536 2020 19246;19247;19248;19249;19250;19251;19252;19253;19254;19255;19256;19257;19258;19259;19260;19261;19262;19263;19264;19265;19266;19267;19268;19269;19270;19271;19272;19273 21061;21062;21063;21064;21065;21066;21067;21068;21069;21070;21071;21072;21073;21074;21075;21076;21077;21078;21079;21080;21081;21082;21083;21084;21085;21086;21087;21088;21089;21090;21091;21092;21093;21094;21095;21096 21075 35 NFINNPLAQADWAAK Unmodified 1671.8369 0.83690442 433 P35579;Q5BKV1;B1AH99 MYH9 Myosin-9 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 4 2 2 2 4 2 8 4 5 1 3 88.286 85.417 2;3 1.7965E-53 31766 Miao_Sh-c_proteinG_mass3_141226_03 176.25 132.35 189000 16122 20622 0 58198 50917 358.13 21297 5471.7 6484.3 0 6638.8 2888.9 2064 433 2021 19274;19275;19276;19277;19278;19279;19280;19281;19282;19283;19284;19285;19286;19287;19288;19289;19290;19291;19292;19293;19294;19295;19296;19297;19298;19299;19300;19301;19302;19303;19304;19305;19306;19307;19308;19309;19310;19311;19312 21097;21098;21099;21100;21101;21102;21103;21104;21105;21106;21107;21108;21109;21110;21111;21112;21113;21114;21115;21116;21117;21118;21119;21120;21121;21122;21123;21124;21125;21126;21127;21128;21129;21130;21131;21132;21133;21134;21135;21136;21137;21138;21139;21140;21141;21142;21143;21144;21145;21146;21147;21148;21149;21150;21151;21152;21153;21154;21155;21156;21157;21158;21159;21160;21161 21127 65 NFITAEELR Unmodified 1091.5611 0.56112349 283 O43707;O43707-2;F5GXS2;O43707-3;H7C144 ACTN4 Alpha-actinin-4 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 3 2 2 70.769 67.501 2 0.001887 16792 Miao_Sh-H9_proteinG_mass3_141226_03 101.82 59.482 20735 343.31 484.61 0 0 3233.7 1842.9 0 0 7442.1 0 917.83 6470.5 2065 283 2022 19313;19314;19315;19316;19317;19318;19319;19320;19321;19322;19323;19324 21162;21163;21164;21165;21166;21167;21168;21169 21169 8 NFIVWLEDQK Unmodified 1290.6608 0.66083754 670 Q9Y224;G3V4C6;G3V4E7 C14orf166 UPF0568 protein C14orf166 yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 1 92.387 93.118 2;3 5.3759E-14 20628 Miao_Sh-H9_Flag_mass3_141226_01 156.57 106.27 11898 2092.8 375.78 0 0 5088.9 0 3456.7 883.76 0 0 0 0 2066 670 2023 19325;19326;19327;19328;19329;19330;19331 21170;21171;21172;21173;21174;21175 21174 6 NFLVEEEQR Unmodified 1162.5619 0.56185177 167 P19474;F5H012 TRIM21 E3 ubiquitin-protein ligase TRIM21 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 3 1 1 53.783 55.454 2 6.7631E-45 7896 Miao_Sh-H9_Flag_mass3_141226_02 174.8 126.24 30277 4688.8 8881.2 0 0 238.15 0 0 0 15005 0 666.1 797.46 2067 167 2024 19332;19333;19334;19335;19336;19337;19338;19339;19340 21176;21177;21178;21179;21180;21181;21182 21179 7 NFQEEQINTR Unmodified 1277.6 0.60002819 609 Q8IXB1;Q8IXB1-2 DNAJC10 DnaJ homolog subfamily C member 10 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 2 1 43.489 44.228 2 0.00018477 9586 Miao_Sh-H9_proteinG_mass3_141226_02 120.77 63.239 1642.2 0 0 0 237.46 0 0 31.825 89.355 0 0 0 1283.6 2068 609 2025 19341;19342;19343;19344;19345;19346 21183;21184;21185 21184 3 NFYQEHPDLAR Unmodified 1388.6473 0.64731274 34 P17844;J3KTA4;B4DLW8;X6RLV5;J3QR02;J3KRX8;J3QRQ7 DDX5 Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 50.721 50.195 3 0.0058671 6463 Miao_Sh-H9_Flag_mass3_141226_03 62.633 41.855 1424.5 0 0 0 0 0 0 0 450.78 973.68 0 0 0 2069 34 2026 19347;19348;19349 21186;21187 21186 2 NGLSLAALK Unmodified 885.52837 0.5283668 377 P16401 HIST1H1B Histone H1.5 yes yes 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1 1 1 60.795 62.354 2 0.00021663 16536 Miao_Sh-H9_proteinG_mass3_141226_02 123.75 53.75 242380 0 4357.8 4842.5 6868.2 7408.9 40975 9408 10180 10414 69087 32595 46241 2070 377 2027 19350;19351;19352;19353;19354;19355;19356;19357;19358;19359;19360 21188;21189;21190;21191;21192;21193;21194;21195;21196;21197;21198;21199;21200;21201;21202;21203;21204;21205;21206;21207;21208;21209;21210;21211;21212;21213;21214;21215;21216;21217;21218;21219;21220;21221 21214 34 NGQDLGVAFK Unmodified 1047.5349 0.53490874 536 Q00839;Q00839-2;Q5RI18 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 3 1 49.403 52.107 2 0.00051152 12327 Miao_Sh-H9_proteinG_mass3_141226_03 102.05 75.091 21375 0 0 0 0 647.29 6855.2 2002 0 0 424.21 5638.6 5807.2 2071 536 2028 19361;19362;19363;19364;19365;19366;19367;19368;19369 21222;21223;21224;21225;21226;21227 21226 6 NGQPESEDK Unmodified 1002.4254 0.42541787 92;93 CON__ENSEMBL:ENSBTAP00000024462;CON__ENSEMBL:ENSBTAP00000024466 no no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching 2 1 1 2 24.416 26.02 2 0.0026525 2257 Miao_Sh-c_proteinG_mass3_141226_02 92.239 71.684 1384.1 0 0 0 448.65 388.3 0 0 0 46.687 0 0 500.48 + 2072 92;93 2029 19370;19371;19372;19373;19374;19375 21228;21229;21230;21231 21231 4 NGVYISEENFR Unmodified 1326.6204 0.62042929 473 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 1 58.538 59.599 2 4.395E-05 9310 Miao_Sh-H9_Flag_mass3_141226_01 124.42 85.64 5129.9 295.1 609.7 0 0 252.97 0 0 2321.1 0 712.4 938.61 0 2073 473 2030 19376;19377;19378;19379;19380;19381;19382 21232;21233 21232 2 NGYGFINR Unmodified 939.45626 0.45626449 381;525 P16989;P16989-2;P16989-3;Q9Y2T7;C9J5V9;P67809 YBX3;YBX2;YBX1 Y-box-binding protein 3;Y-box-binding protein 2;Nuclease-sensitive element-binding protein 1 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 47.743 51.101 2 0.014331 12735 Miao_Sh-H9_proteinG_mass3_141226_01 85.212 62.192 7682 0 0 0 0 0 2551.7 0 0 0 2492.3 0 2638 2074 381;525 2031 19383;19384;19385 21234 21234 1 NHLVTLPEAIHFLTEIEVLDVR Unmodified 2557.3904 0.39042334 556 Q13045;Q13045-2;Q13045-3;J3QQQ2;J3KS54 FLII Protein flightless-1 homolog yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 113.24 114.89 4 8.6782E-05 29928 Miao_Sh-c_proteinG_mass3_141226_01 56.882 51.05 2031.8 0 0 0 2031.8 0 0 0 0 0 0 0 0 2075 556 2032 19386 21235 21235 1 NHVHIANPDFIWK Unmodified 1589.8103 0.81029574 664 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 1 1 62.591 63.934 3 0.001157 10306 Miao_Sh-c_proteinG_mass3_141226_01 73.219 59.428 6187.3 0 0 0 0 2640.1 0 395.33 388.39 0 961.27 661.98 1140.2 2076 664 2033 19387;19388;19389;19390;19391;19392;19393 21236;21237 21236 2 NIDDGTSDRPYSHALVAGIDR Unmodified 2271.088 0.087986745 493 P61353;K7ELC7 RPL27 60S ribosomal protein L27 yes no 0 0 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 3 3 1 1 3 2 2 1 56.51 58.221 3;4 1.4443E-15 9180 Miao_Sh-H9_Flag_mass3_141226_03 92.098 77.832 109510 6675.1 5177.1 4751.9 14917 11548 3772.3 10096 0 13665 13293 15632 9982.4 2077 493 2034 19394;19395;19396;19397;19398;19399;19400;19401;19402;19403;19404;19405;19406;19407;19408;19409;19410;19411;19412;19413;19414 21238;21239;21240;21241;21242;21243;21244;21245;21246;21247;21248;21249;21250;21251;21252;21253;21254;21255;21256;21257;21258 21252 21 NIDDGTSDRPYSHALVAGIDRYPR Unmodified 2687.3052 0.30519016 493 P61353;K7ELC7 RPL27 60S ribosomal protein L27 yes no 0 0 0 0 2 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 101.9 89.724 4 0.0003976 31856 Miao_Sh-H9_proteinG_mass3_141226_01 51.827 35.212 5393.6 0 0 0 0 0 0 0 0 0 5393.6 0 0 2078 493 2035 19415 21259 21259 1 NIEDVIAQGIGK Unmodified 1255.6772 0.67721588 325 P05387;H0YDD8 RPLP2 60S acidic ribosomal protein P2 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 3 3 2 4 3 4 4 3 3 2 5 81.803 77.718 2;3 3.6232E-43 15944 Miao_Sh-H9_Flag_mass3_141226_01 188.88 140.73 252510 15932 1867.9 9523 25591 24546 25271 20728 8990.6 17451 21753 25360 55495 2079 325 2036 19416;19417;19418;19419;19420;19421;19422;19423;19424;19425;19426;19427;19428;19429;19430;19431;19432;19433;19434;19435;19436;19437;19438;19439;19440;19441;19442;19443;19444;19445;19446;19447;19448;19449;19450;19451;19452 21260;21261;21262;21263;21264;21265;21266;21267;21268;21269;21270;21271;21272;21273;21274;21275;21276;21277;21278;21279;21280;21281;21282;21283;21284;21285;21286;21287;21288;21289;21290;21291;21292;21293;21294;21295;21296 21272 36 NIEIDSPYEISR Unmodified 1434.6991 0.69907354 318 P04843;B7Z4L4 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 1 64.089 64.921 2 0.019445 11674 Miao_Sh-H9_Flag_mass3_141226_01 54.343 28.783 4751.4 853.7 652.98 903.03 0 0 0 0 0 1534.5 0 0 807.16 2080 318 2037 19453;19454;19455;19456;19457;19458 21297;21298 21298 2 NIETIINTFHQYSVK Unmodified 1805.9312 0.93119874 332 P06702 S100A9 Protein S100-A9 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 118.03 103.34 3 5.3617E-05 37401 Miao_Sh-H9_proteinG_mass3_141226_01 103.6 82.054 10464 0 0 0 0 0 0 0 0 0 7497.3 0 2967 2081 332 2038 19459;19460;19461 21299;21300;21301;21302 21301 4 NIGLGFK Unmodified 747.42792 0.42792448 254 P62280;M0QZC5 RPS11 40S ribosomal protein S11 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 1 1 1 1 54.92 55.951 2 0.04417 12888 Miao_Sh-c_proteinG_mass3_141226_03 73.975 5.49 27174 918.81 1111.6 1610.4 0 0 6578.2 1869 1863.8 0 13222 0 0 2082 254 2039 19462;19463;19464;19465;19466;19467;19468 21303 21303 1 NIIHGSDSVESAEK Unmodified 1484.7107 0.71070086 374 P15531;P15531-2 NME1 Nucleoside diphosphate kinase A yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 2 36.36 38.315 2;3 0.00010278 8265 Miao_Sh-H9_proteinG_mass3_141226_01 85.837 63.516 5143.6 0 0 0 0 151.74 1346.9 231.26 171.08 0 1257 1106.9 878.68 2083 374 2040 19469;19470;19471;19472;19473;19474;19475;19476 21304;21305;21306;21307;21308 21305 5 NIILEEGK Unmodified 914.5073 0.50729701 404 P23528;G3V1A4;E9PP50;E9PK25;E9PQB7;E9PLJ3;E9PS23 CFL1 Cofilin-1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 1 2 1 2 44.617 46.394 2 0.02347 11242 Miao_Sh-H9_proteinG_mass3_141226_01 78.264 16.573 53193 894.66 1083.7 1212.3 811.91 611.73 11651 0 1385.6 1545.6 13304 9841.6 10851 2084 404 2041 19477;19478;19479;19480;19481;19482;19483;19484;19485;19486;19487;19488;19489 21309;21310;21311 21309 3 NILFVITKPDVYK Unmodified 1548.8916 0.89156576 138;644 E9PAV3;F8W1N5;F8VZJ2;F8VNW4;F8W0W4;H0YHX9;Q13765;E9PAV3-2;F8VZ58;Q9BZK3 NACA;NACAP1 Nascent polypeptide-associated complex subunit alpha, muscle-specific form;Nascent polypeptide-associated complex subunit alpha;Putative nascent polypeptide-associated complex subunit alpha-like protein no no 0 0 0 0 1 By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 1 83.999 81.803 3 0.001367 15794 Miao_Sh-c_proteinG_mass3_141226_01 77.644 56.094 12064 2175.6 1582 0 2645.8 0 0 0 2832.4 0 2827.9 0 0 2085 138;644 2042 19490;19491;19492;19493;19494 21312;21313;21314 21312 3 NILLVSDGHLQDESLTLQLVK Unmodified 2334.2795 0.27947591 664 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 100.64 95.278 3 0.0036848 20490 Miao_Sh-c_proteinG_mass3_141226_01 46.415 26.743 0 0 0 0 0 0 0 0 0 0 0 0 0 2086 664 2043 19495;19496 21315;21316 21315 2 NIPGITLLNVSK Unmodified 1267.75 0.7499869 438 P36578;H3BM89 RPL4 60S ribosomal protein L4 yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 3 1 3 3 1 3 4 1 6 86.651 78.965 2 0.001017 16558 Miao_Sh-H9_Flag_mass3_141226_01 82.774 53.817 98674 19056 0 0 15598 14254 14701 0 0 874.61 30447 0 3744.2 2087 438 2044 19497;19498;19499;19500;19501;19502;19503;19504;19505;19506;19507;19508;19509;19510;19511;19512;19513;19514;19515;19516;19517;19518;19519;19520;19521;19522;19523 21317;21318;21319;21320;21321;21322;21323;21324;21325;21326;21327;21328;21329;21330;21331;21332;21333;21334;21335;21336;21337;21338;21339 21323 23 NIPWAFEAIK Unmodified 1187.6339 0.63389451 664 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 82.219 86.78 2 0.032657 18676 Miao_Sh-c_proteinG_mass3_141226_02 57.174 24.564 0 0 0 0 0 0 0 0 0 0 0 0 0 2088 664 2045 19524 21340 21340 1 NIQVVVR Unmodified 826.50249 0.5024864 473 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 3 40.692 41.865 2 0.026803 4627 Miao_Sh-c_Flag_mass3_141226_01 86.086 43.858 1063.7 519.11 0 374.11 50.915 74.159 0 45.381 0 0 0 0 0 2089 473 2046 19525;19526;19527;19528;19529;19530;19531 21341;21342;21343 21341 3 NISFTVWDVGGQDK Unmodified 1564.7522 0.75217174 170 P61204;P84077;F5H423;F5H0C7 ARF3;ARF1 ADP-ribosylation factor 3;ADP-ribosylation factor 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 83.518 83.167 2 0.0048905 18056 Miao_Sh-H9_Flag_mass3_141226_03 60.549 40.27 0 0 0 0 0 0 0 0 0 0 0 0 0 2090 170 2047 19532 21344 21344 1 NITRPFEDQTSLEFFSK Unmodified 2058.0058 0.0058202445 597 Q9H7B2;Q5VXN0 RPF2 Ribosome production factor 2 homolog yes no 0 0 0 0 1 By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 80.504 80.228 3 0.00042699 16401 Miao_Sh-H9_Flag_mass3_141226_01 66.893 37.538 3262.9 912.16 0 0 0 0 0 2350.7 0 0 0 0 0 2091 597 2048 19533;19534;19535;19536 21345;21346;21347 21346 3 NIVEAAAVR Unmodified 941.52943 0.52942943 516 P62854;Q5JNZ5 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 3 1 42.922 45.511 2 0.00080561 10385 Miao_Sh-H9_proteinG_mass3_141226_02 103.87 64.863 35704 0 0 1012.8 630.5 0 11641 0 0 0 12151 1636.2 8632.3 2092 516 2049 19537;19538;19539;19540;19541;19542;19543;19544;19545;19546;19547 21348;21349;21350;21351;21352;21353;21354;21355;21356;21357;21358 21356 11 NIYVLQELDNPGAK Unmodified 1572.8148 0.814772 363 P12956;B1AHC9 XRCC6 X-ray repair cross-complementing protein 6 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 68.697 68.731 2 1.5927E-07 21326 Miao_Sh-c_proteinG_mass3_141226_03 84.753 46.516 3058.9 0 0 0 0 0 2162.9 0 0 0 0 301.59 594.34 2093 363 2050 19548;19549;19550 21359 21359 0 NKLDHYAIIK Unmodified 1213.6819 0.68190733 9 P62750;H7BY10;K7EJV9;K7ERT8;A8MUS3 RPL23A 60S ribosomal protein L23a yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 81.502 77.392 3 0.048129 27922 Miao_Sh-H9_proteinG_mass3_141226_01 55.314 11.506 6156.4 0 0 0 0 3580.4 0 0 0 0 2576 0 0 2094 9 2051 19551;19552 21360 21360 1 NKLEGLEDALQK Unmodified 1356.7249 0.72489436 98 P02538;CON__P02538;P48668;CON__P04259;CON__P48668 KRT6A;KRT6C Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C no no 0 0 0 0 1 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 2 1 1 1 1 2 3 67.651 63.878 3 0.00252 9332 Miao_Sh-c_proteinG_mass3_141226_02 86.288 37.307 23367 375.7 0 0 2193.9 2317.3 7539.6 1574.4 1872.6 1500.2 3107 1090.9 1795.3 + 2095 98 2052 19553;19554;19555;19556;19557;19558;19559;19560;19561;19562;19563;19564;19565;19566 21361;21362;21363;21364;21365;21366;21367 21362 7 NKYEDEINKR Unmodified 1307.647 0.64697839 314;98;105;100 P02538;CON__P02538;P48668;CON__P04259;CON__P48668;F8W0C6;CON__Q8VED5;CON__H-INV:HIT000016045;P05787;CON__P05787;P05787-2;F8VUG2;F8W1U3;F8VP67;P13647;CON__P13647;P04264;CON__P04264 KRT6A;KRT6C;KRT5;KRT8;KRT1 Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 1 no no 0 0 0 0 2 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 32.93 34.554 3 0.0028849 7074 Miao_Sh-H9_proteinG_mass3_141226_01 118.23 5.9378 2142 0 0 0 63.65 0 308.2 68.18 0 0 1041.4 660.58 0 + 2096 98;100;105;314 2053 19567;19568;19569;19570;19571 21368 21368 1 NLANTVTEEILEK Unmodified 1472.7722 0.77223848 286 O60506-4;O60506-3;O60506;O60506-2;O60506-5 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 2 1 1 8 3 2 98.082 90.754 2;3 6.9205E-05 33435 Miao_Sh-H9_proteinG_mass3_141226_02 92.039 46.21 7161.4 780.57 0 0 0 0 4690.7 0 0 1151.6 0 538.55 0 2097 286 2054 19572;19573;19574;19575;19576;19577;19578;19579;19580;19581;19582;19583;19584;19585;19586;19587;19588;19589 21369;21370;21371;21372;21373;21374;21375;21376;21377;21378;21379;21380;21381;21382;21383;21384;21385;21386 21383 18 NLASGEVGFFPSDA Unmodified 1409.6463 0.64630969 206 H0YCG7 VAV3 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 2 1 3 85.755 82.497 2 0.0042085 25670 Miao_Sh-H9_proteinG_mass3_141226_03 62.088 2.8895 59221 0 439.25 0 0 3507 0 0 439.25 0 35246 19589 0 2098 206 2055 19590;19591;19592;19593;19594;19595;19596;19597;19598 21387;21388;21389;21390;21391;21392;21393 21391 7 NLATAYDNFVELVANLK Unmodified 1893.9836 0.98362824 618 Q8WUM4;Q8WUM4-2 PDCD6IP Programmed cell death 6-interacting protein yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 2 1 2 1 2 117.52 117.72 2;3 1.6599E-06 30642 Miao_Sh-H9_Flag_mass3_141226_02 79.837 65.235 14088 2270.3 0 777.81 1113.7 0 0 2776.6 3071.3 4078.4 0 0 0 2099 618 2056 19599;19600;19601;19602;19603;19604;19605;19606;19607;19608 21394;21395;21396;21397;21398;21399 21398 5 NLATTVTEEILEK Unmodified 1459.777 0.77698951 281 O43390;O43390-2;O43390-4;O43390-3;B4DT28;E7ETM7 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 3 1 104.28 96.855 2;3 0.00032088 36284 Miao_Sh-H9_proteinG_mass3_141226_01 90.707 47.731 18670 0 0 0 4586.3 3203.7 3505.2 0 0 0 4148.8 0 3226 2100 281 2057 19609;19610;19611;19612;19613;19614;19615;19616 21400;21401;21402;21403;21404;21405;21406 21403 7 NLDFQDVLDK Unmodified 1205.5928 0.59281755 680 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 2 66.589 65.403 2 0.0049745 29890 Miao_Sh-H9_proteinG_mass3_141226_02 84.479 37.398 7492.4 0 372.29 400.93 774.41 0 0 0 0 566.79 4804 573.95 0 2101 680 2058 19617;19618;19619;19620;19621;19622;19623 21407;21408 21408 2 NLDIERPTYTNLNR Unmodified 1717.8747 0.87474649 529 P68363 TUBA1B Tubulin alpha-1B chain no no 0 0 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 3 2 2 5 2 3 2 3 4 7 64.503 62.945 2;3 2.1633E-57 8628 Miao_Sh-H9_Flag_mass3_141226_01 189.99 150.21 369650 21410 17744 28105 19655 18138 34180 32548 44765 37638 32103 38204 45161 2102 529 2059 19624;19625;19626;19627;19628;19629;19630;19631;19632;19633;19634;19635;19636;19637;19638;19639;19640;19641;19642;19643;19644;19645;19646;19647;19648;19649;19650;19651;19652;19653;19654;19655;19656;19657;19658;19659 21409;21410;21411;21412;21413;21414;21415;21416;21417;21418;21419;21420;21421;21422;21423;21424;21425;21426;21427;21428;21429;21430;21431;21432;21433;21434;21435;21436;21437;21438;21439;21440;21441;21442;21443;21444;21445;21446;21447;21448;21449;21450;21451;21452;21453;21454;21455;21456;21457;21458;21459;21460;21461;21462;21463;21464;21465;21466;21467;21468;21469;21470;21471;21472;21473;21474;21475;21476;21477;21478;21479;21480;21481 21437 72 NLDLDSIIAEVK Unmodified 1328.7187 0.71874635 98;105;108 P02538;CON__P02538;P48668;CON__P04259;CON__P48668;O95678;CON__O95678;CON__Q8VED5;Q5XKE5;CON__Q5XKE5;P13647;CON__P13647;H0YI76;H0YIN9;P35908;CON__P35908 KRT6A;KRT6C;KRT75;KRT79;KRT5;KRT2 Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 79;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 2 epidermal no no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 2 1 1 3 3 5 104.7 97.409 2;3 1.0555E-31 35839 Miao_Sh-H9_proteinG_mass3_141226_01 176.86 109.65 133070 0 4290 0 3182.4 18451 22221 6868.5 0 0 40916 0 37138 + 2103 98;105;108 2060 19660;19661;19662;19663;19664;19665;19666;19667;19668;19669;19670;19671;19672;19673;19674;19675;19676 21482;21483;21484;21485;21486;21487;21488;21489;21490;21491;21492;21493;21494;21495;21496;21497 21489 15 NLILVVR Unmodified 825.54362 0.54362294 535 Q00610;Q00610-2 CLTC Clathrin heavy chain 1 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 2 1 1 1 1 1 62.303 62.463 2 0.0024084 10493 Miao_Sh-H9_Flag_mass3_141226_03 134.44 19.898 7307.7 1405.2 0 1053.7 0 0 0 0 1814.6 2053.5 980.67 0 0 2104 535 2061 19677;19678;19679;19680;19681;19682;19683;19684 21498;21499;21500;21501;21502;21503;21504 21504 7 NLLELLINIK Unmodified 1181.7384 0.73835958 673 Q9Y287 ITM2B Integral membrane protein 2B;BRI2, membrane form;BRI2 intracellular domain;BRI2C, soluble form;Bri23 peptide yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 2 1 2 111.24 111.84 2 0.0016945 28272 Miao_Sh-H9_Flag_mass3_141226_02 101.3 54.451 5412.6 0 0 2257.4 0 0 0 0 3155.1 0 0 0 0 2105 673 2062 19685;19686;19687;19688;19689;19690;19691;19692 21505;21506;21507;21508;21509;21510;21511;21512;21513;21514 21511 10 NLLIFENLIDLK Unmodified 1443.8337 0.83371653 533 P78527;E7EUY0;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 111.23 111.54 2 0.0037471 26810 Miao_Sh-H9_Flag_mass3_141226_01 78.814 46.494 6028.2 0 0 0 571.26 0 0 1941.5 0 3515.4 0 0 0 2106 533 2063 19693;19694;19695 21515 21515 1 NLLSVAYK Unmodified 906.51747 0.51746776 523;495;427;500;418;544 P63104;E7EX29;E7ESK7;P31947;E5RGE1;E5RIR4;E9PD24;E7EVZ2;P31947-2;B4DJF2;I3L3T1;K7EIT4;A2IDB2;P61981;P31946;P31946-2;Q4VY20;Q4VY19;P27348;E9PG15;P62258;P62258-2;Q04917 YWHAZ;SFN;YWHAE;YWHAH;YWHAG;YWHAB;YWHAQ 14-3-3 protein zeta/delta;14-3-3 protein sigma;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein theta;14-3-3 protein epsilon;14-3-3 protein eta no no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 1 1 1 1 58.378 60.075 2 0.02347 14688 Miao_Sh-c_proteinG_mass3_141226_03 78.264 1.4896 62734 0 0 2537.5 3013.9 2548 14090 8170.3 16065 0 16310 0 0 2107 523;495;427;418;500;544 2064 19696;19697;19698;19699;19700;19701;19702 21516;21517;21518 21518 3 NLPFDFTWK Unmodified 1166.576 0.57604528 471 P52272;P52272-2;M0QY96;M0R2I7 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 3 1 1 1 1 2 92.487 93.27 2 0.035741 18942 Miao_Sh-c_Flag_mass3_141226_03 63.076 43.981 14010 0 2240.5 1926.9 436.89 2895.3 0 1687.1 0 4823.4 0 0 0 2108 471 2065 19703;19704;19705;19706;19707;19708;19709;19710;19711 21519;21520;21521 21521 3 NLPIYSEEIVEMYK Oxidation (M) 1742.8437 0.84368886 433 P35579;Q5BKV1 MYH9 Myosin-9 yes no 0 0 1 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 85.088 83.153 2 0.038868 30165 Miao_Sh-H9_proteinG_mass3_141226_01 44.925 26.789 4676.9 289.46 0 741.01 1261.3 0 0 0 0 314.06 2071.1 0 0 2109 433 2066 19712;19713;19714;19715;19716 21522;21523 21523 2 NLPIYSEEIVEMYK Unmodified 1726.8488 0.84877424 433 P35579;Q5BKV1 MYH9 Myosin-9 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 2 1 1 90.017 90.618 2 0.0058782 20238 Miao_Sh-c_proteinG_mass3_141226_01 58.32 41.204 4979.6 0 0 2253.4 0 0 0 0 2726.2 0 0 0 0 2110 433 2066 19717;19718;19719;19720;19721 21524;21525;21526;21527 21525 4 NLPLPPPPPPR Unmodified 1193.6921 0.69207809 494 P61978;P61978-2;Q5T6W5;P61978-3;Q5T6W2;Q5T6W1 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 3 1 3 1 3 1 3 1 56.075 57.479 2 0.00020931 15420 Miao_Sh-H9_proteinG_mass3_141226_01 125.97 52.084 7298.6 0 472.88 0 597.5 0 2255.2 0 1922.9 0 2050.1 0 0 2111 494 2067 19722;19723;19724;19725;19726;19727;19728;19729;19730;19731;19732;19733;19734;19735;19736;19737;19738;19739 21528;21529;21530;21531;21532;21533;21534;21535;21536;21537;21538;21539;21540;21541;21542;21543;21544;21545;21546;21547 21543 20 NLPQYVSNELLEEAFSVFGQVER Unmodified 2667.318 0.31804626 578 Q15233;Q15233-2;C9IZL7 NONO Non-POU domain-containing octamer-binding protein yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 2 1 1 1 120.93 121.38 3;4 1.2359E-19 32817 Miao_Sh-c_proteinG_mass3_141226_01 98.21 90.661 43916 0 0 11787 21346 0 0 0 10782 0 0 0 0 2112 578 2068 19740;19741;19742;19743;19744;19745 21548;21549;21550;21551;21552;21553;21554;21555;21556;21557 21551 10 NLPVNFEVAR Unmodified 1157.6193 0.61930707 305 O95793;Q5JW30;O95793-2 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 66.644 66.994 2 0.036825 19056 Miao_Sh-H9_proteinG_mass3_141226_01 55.314 36.22 0 0 0 0 0 0 0 0 0 0 0 0 0 2113 305 2069 19746 21558 21558 1 NLPYVYIPSK Unmodified 1192.6492 0.64921022 119 Q9NX24;D6RC52;D6RCB9;H0YC83 NHP2 H/ACA ribonucleoprotein complex subunit 2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 70.249 70.315 2 0.011675 19674 Miao_Sh-H9_proteinG_mass3_141226_03 72.2 37.948 6181.1 0 0 0 2486.1 0 269.59 0 0 0 0 3425.5 0 2114 119 2070 19747;19748;19749;19750 21559;21560 21560 2 NLQEAEEWYK Unmodified 1308.5986 0.59863121 346 P08670;B0YJC4;B0YJC5;Q5JVS8;P41219;H7C5W5;P41219-2;F8W835 VIM;PRPH Vimentin;Peripherin yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 2 1 2 2 2 1 2 1 62.394 63.694 2 1.9107E-09 10553 Miao_Sh-c_proteinG_mass3_141226_01 141.89 112.64 42983 2060.1 820.95 0 4719.8 3850.7 5597.5 8025 4023.8 5292.4 5089 2224.1 1279.1 2115 346 2071 19751;19752;19753;19754;19755;19756;19757;19758;19759;19760;19761;19762;19763;19764;19765;19766 21561;21562;21563;21564;21565;21566;21567;21568 21562 8 NLQNLLILTAIK Unmodified 1352.8391 0.83913625 535 Q00610;Q00610-2;P53675;J3KR87;P53675-2 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain 2 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 98.602 97.749 2 1.6666E-08 22392 Miao_Sh-H9_Flag_mass3_141226_01 102.87 75.048 5448 0 0 0 0 0 0 5448 0 0 0 0 0 2116 535 2072 19767;19768 21569;21570 21570 1 NLQTVNVDEN Unmodified 1144.536 0.53603095 518 P62899 RPL31 60S ribosomal protein L31 yes yes 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 3 1 44.404 46.626 2 1.1612E-25 9875 Miao_Sh-c_proteinG_mass3_141226_03 177.57 158.05 24745 1256.3 1218.1 0 0 0 5994.2 0 0 0 8137.7 1678.8 6460 2117 518 2073 19769;19770;19771;19772;19773;19774;19775;19776;19777;19778 21571;21572;21573;21574;21575;21576;21577;21578;21579;21580 21575 10 NLQYYDISAK Unmodified 1213.5979 0.59790293 58 P62826;B5MDF5;J3KQE5;F5H018;B4DV51 RAN GTP-binding nuclear protein Ran yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 54.399 57.357 2 0.022902 14246 Miao_Sh-H9_proteinG_mass3_141226_03 63.212 15.609 0 0 0 0 0 0 0 0 0 0 0 0 0 2118 58 2074 19779 21581 21581 1 NLSEAQLR Unmodified 929.49304 0.49304393 660 Q9NZT1 CALML5 Calmodulin-like protein 5 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 1 37.421 39.376 2 0.020143 3973 Miao_Sh-c_proteinG_mass3_141226_01 80.165 40.062 676.33 0 84.768 0 304.49 287.08 0 0 0 0 0 0 0 2119 660 2075 19780;19781;19782 21582;21583 21582 2 NLSPGAVESDVR Unmodified 1242.6204 0.62042929 478 P53621;P53621-2 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 46.534 52.599 2 0.01367 11795 Miao_Sh-c_proteinG_mass3_141226_03 59.227 9.187 0 0 0 0 0 0 0 0 0 0 0 0 0 2120 478 2076 19783 21584 21584 1 NLSPYVSNELLEEAFSQFGPIER Unmodified 2638.2915 0.29149716 399 P23246;P23246-2 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 2 120.32 107.67 3 4.1784E-41 39424 Miao_Sh-H9_proteinG_mass3_141226_01 124.19 99.293 0 0 0 0 0 0 0 0 0 0 0 0 0 2121 399 2077 19784;19785;19786 21585;21586;21587 21587 3 NLSSNEAISLEEIR Unmodified 1573.7948 0.79476484 533 P78527;E7EUY0;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 2 1 1 1 1 68.711 69.542 2 0.0011105 20266 Miao_Sh-H9_proteinG_mass3_141226_01 72.898 51.652 8813.3 796.67 0 0 0 677.21 0 1572.1 1827.4 988.4 1758.8 1192.7 0 2122 533 2078 19787;19788;19789;19790;19791;19792;19793;19794 21588;21589;21590 21589 3 NLVPGESVYGEK Unmodified 1290.6456 0.6455814 394 P22087;M0R0P1;M0R299;M0QXL5;M0R2Q4;M0R2U2;M0R1H0;M0R2B0 FBL rRNA 2'-O-methyltransferase fibrillarin yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 2 1 1 1 1 1 1 1 52.331 54.543 2 0.0079909 12360 Miao_Sh-c_proteinG_mass3_141226_03 66.393 9.845 27283 0 0 0 1136 418.21 5437.2 1692.5 0 902.79 5626.5 6058.8 6011 2123 394 2079 19795;19796;19797;19798;19799;19800;19801;19802;19803;19804 21591;21592;21593;21594;21595;21596;21597 21592 7 NLWLLLCPDTLSFDWSMDAVPLLK Oxidation (M) 2862.4336 0.43361006 176 Q8N394;F8VSH2 TMTC2 Transmembrane and TPR repeat-containing protein 2 yes no 0 0 1 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 120.3 120.65 3 0.00066563 29457 Miao_Sh-c_Flag_mass3_141226_02 45.363 21.081 0 0 0 0 0 0 0 0 0 0 0 0 0 2124 176 2080 19805 21598 21598 18 1 NLYIISVK Unmodified 948.56442 0.56441796 514 P62829;J3KT29;C9JD32;B9ZVP7 RPL23 60S ribosomal protein L23 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 2 1 1 1 1 1 1 1 1 67.877 68.228 2 0.014782 12304 Miao_Sh-H9_Flag_mass3_141226_02 84.615 56.36 70827 3797.4 5157.3 4124.4 0 5797 7637 7245.2 9732.3 8941.3 8470.3 3912.9 6012 2125 514 2081 19806;19807;19808;19809;19810;19811;19812;19813;19814;19815;19816;19817;19818 21599;21600;21601;21602;21603;21604;21605;21606;21607;21608;21609;21610 21605 12 NMDPLNDNIATLLHQSSDK Unmodified 2125.011 0.010981977 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 79.969 84.531 3 9.2418E-21 17952 Miao_Sh-c_proteinG_mass3_141226_02 111.65 94.081 0 0 0 0 0 0 0 0 0 0 0 0 0 2126 433 2082 19819 21611 21611 1 NMGGPYGGGNYGPGGSGGSGGYGGR Unmodified 2188.8981 0.89807748 397 P22626;P22626-2 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 53.615 54.267 3 0.0021907 6452 Miao_Sh-c_proteinG_mass3_141226_01 41.672 38.036 3877.8 0 1918.1 0 521.47 0 0 0 0 1438.2 0 0 0 2127 397 2083 19820;19821;19822 21612 21612 1 NNASTDYDLSDK Unmodified 1341.5685 0.56845329 443 P39023;G5E9G0;B5MCW2 RPL3 60S ribosomal protein L3 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 39.609 43.101 2 0.039656 8061 Miao_Sh-c_proteinG_mass3_141226_03 50.897 45.681 4450.4 0 0 0 240.5 0 1556.2 0 0 0 0 0 2653.7 2128 443 2084 19823;19824;19825 21613 21613 1 NNLAGAEELFAR Unmodified 1303.6521 0.65206377 535 Q00610;Q00610-2 CLTC Clathrin heavy chain 1 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 3 1 1 68.503 69.768 2 0.0020429 13699 Miao_Sh-H9_Flag_mass3_141226_03 98.902 70.725 3699.6 0 0 0 0 1778.5 269.29 0 0 0 0 832.35 819.42 2129 535 2085 19826;19827;19828;19829;19830;19831;19832;19833;19834 21614;21615;21616;21617;21618;21619 21618 6 NNLIYQVDTLK Unmodified 1319.7085 0.70851601 10 Q9Y608;Q9Y608-2;A8MXR0;Q9Y608-4;C9JSU1;H7C3N9 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 1 1 1 4 67.764 70.063 2 0.00065267 12921 Miao_Sh-H9_Flag_mass3_141226_01 114.86 85.905 19699 1882.9 0 0 3776.2 3416.3 6023.1 0 0 3451.8 0 427.19 721.4 2130 10 2086 19835;19836;19837;19838;19839;19840;19841;19842;19843;19844;19845;19846;19847 21620;21621;21622;21623;21624;21625;21626;21627;21628;21629;21630 21625 10 NNQFQALLQYADPVSAQHAK Unmodified 2242.1131 0.11307928 415 P26599;P26599-2;P26599-3;K7EK45;K7EKJ7;K7ES59 PTBP1 Polypyrimidine tract-binding protein 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 96.192 90.695 3 0.0010473 19263 Miao_Sh-c_proteinG_mass3_141226_01 52.731 40.53 0 0 0 0 0 0 0 0 0 0 0 0 0 2131 415 2087 19848;19849;19850 21631;21632;21633 21631 3 NNRPSEGPLQTR Unmodified 1367.6906 0.69057454 535 Q00610;Q00610-2 CLTC Clathrin heavy chain 1 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1 30.282 31.434 3 0.014402 6137 Miao_Sh-H9_proteinG_mass3_141226_02 60.161 38.766 2763 27.104 174.17 202.3 0 45.5 0 0 37.7 0 803.41 683.05 789.73 2132 535 2088 19851;19852;19853;19854;19855;19856;19857;19858;19859 21634;21635;21636;21637 21636 4 NNTQVLINCR Unmodified 1230.6139 0.61390412 507 P62316;K7ERG4;P62316-2 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 1 1 1 40.158 41.846 2 0.00022437 9024 Miao_Sh-c_proteinG_mass3_141226_03 95.483 69.366 7211.7 0 1721.2 0 0 0 1814.5 2161.5 434.88 0 0 620.55 459.11 2133 507 2089 19860;19861;19862;19863;19864;19865 21638 21638 0 NNWEVSALSR Unmodified 1174.5731 0.57308516 533 P78527;E7EUY0;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 59.399 61.241 2 0.056348 9869 Miao_Sh-H9_Flag_mass3_141226_02 69.672 40.715 3934.3 0 0 0 0 0 1021 750.99 1594.1 0 0 0 568.25 2134 533 2090 19866;19867;19868;19869 21639 21639 0 NPDDITNEEYGEFYK Unmodified 1832.7741 0.77408897 341 P07900;P07900-2;Q86U12 HSP90AA1 Heat shock protein HSP 90-alpha yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 2 1 1 2 1 1 1 3 69.579 66.772 2 1.7965E-53 12078 Miao_Sh-H9_Flag_mass3_141226_02 176.25 165.61 12615 0 1594.1 2697 2759.3 0 0 0 241.52 0 4714.1 274.9 333.96 2135 341 2091 19870;19871;19872;19873;19874;19875;19876;19877;19878;19879;19880;19881;19882;19883 21640;21641;21642;21643;21644;21645;21646;21647;21648;21649;21650;21651 21647 12 NPDDITQEEYGEFYK Unmodified 1846.7897 0.78973904 344 P08238 HSP90AB1 Heat shock protein HSP 90-beta yes yes 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 2 1 2 2 4 3 1 2 2 66.292 67.367 2;3 1.9483E-53 12456 Miao_Sh-H9_Flag_mass3_141226_02 175.61 163.09 22479 4388.6 296.68 0 6577.4 0 342.9 5591 393.59 0 143.12 4745.5 0 2136 344 2092 19884;19885;19886;19887;19888;19889;19890;19891;19892;19893;19894;19895;19896;19897;19898;19899;19900;19901;19902 21652;21653;21654;21655;21656;21657;21658;21659;21660;21661;21662;21663;21664;21665;21666 21660 15 NPDTQWITK Unmodified 1101.5455 0.54547343 128 P61313;E7EQV9;E7ENU7 RPL15 60S ribosomal protein L15;Ribosomal protein L15 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 48.632 51.69 2 0.0080614 12116 Miao_Sh-H9_proteinG_mass3_141226_03 82.417 41.017 0 0 0 0 0 0 0 0 0 0 0 0 0 2137 128 2093 19903 21667 21667 1 NPEILAIAPVLLDALTDPSR Unmodified 2117.1732 0.17321992 626 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 118.71 119.21 3 0.016328 30933 Miao_Sh-H9_Flag_mass3_141226_02 40.723 35.465 0 0 0 0 0 0 0 0 0 0 0 0 0 2138 626 2094 19904 21668 21668 1 NPNGPYPYTLK Unmodified 1262.6295 0.62953741 371 P14866;M0QXS5;P14866-2 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 2 1 1 1 52.173 53.922 2 0.0050096 7882 Miao_Sh-H9_Flag_mass3_141226_02 83.226 62.939 31547 0 2245 0 1459.2 1190.8 5643.6 1773.7 2010.5 0 5445.2 11779 0 2139 371 2095 19905;19906;19907;19908;19909;19910;19911;19912;19913;19914 21669;21670;21671;21672;21673;21674 21672 6 NPNNPNAHGDFLK Unmodified 1436.6797 0.6796755 609 Q8IXB1;Q8IXB1-2;Q8IXB1-3;E7EP04 DNAJC10 DnaJ homolog subfamily C member 10 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 1 1 2 36.852 39.893 2;3 0.0047232 8531 Miao_Sh-H9_proteinG_mass3_141226_02 66.004 54.085 8567.5 0 0 0 0 0 3562.2 0 0 0 3922.1 1083.2 0 2140 609 2096 19915;19916;19917;19918 21675;21676;21677;21678 21677 4 NPPGFAFVEFEDPR Unmodified 1620.7573 0.75725712 53;77 P84103;B4E241;Q16629;C9JAB2;Q16629-3;Q16629-2;Q16629-4 SRSF3;SRSF7 Serine/arginine-rich splicing factor 3;Serine/arginine-rich splicing factor 7 no no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 3 2 4 1 7 2 3 2 93.216 89.708 2;3 0.00043031 33956 Miao_Sh-H9_proteinG_mass3_141226_01 93.106 72.068 35410 1942 2957.3 2148.3 2841.9 0 356.49 6042.1 1303.1 7296.6 5282.6 3965.1 1274.8 2141 53;77 2097 19919;19920;19921;19922;19923;19924;19925;19926;19927;19928;19929;19930;19931;19932;19933;19934;19935;19936;19937;19938;19939;19940;19941;19942;19943;19944;19945;19946;19947 21679;21680;21681;21682;21683;21684;21685;21686;21687;21688;21689;21690;21691;21692;21693;21694;21695 21690 17 NQDATVYVGGLDEK Unmodified 1507.7155 0.71545188 582 Q15427 SF3B4 Splicing factor 3B subunit 4 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 55.006 55.658 2 0.00068987 14534 Miao_Sh-H9_proteinG_mass3_141226_01 74.296 59.85 0 0 0 0 0 0 0 0 0 0 0 0 0 2142 582 2098 19948 21696 21696 1 NQDLAPNSAEQASILSLVTK Unmodified 2098.0906 0.090612506 552 Q12905;X6R6Z1 ILF2 Interleukin enhancer-binding factor 2 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 1 1 92.575 88.905 3 0.00069906 31845 Miao_Sh-c_proteinG_mass3_141226_03 52.72 41.674 18366 0 0 801.4 6982.4 4969.7 2654.3 0 0 0 2958.3 0 0 2143 552 2099 19949;19950;19951;19952;19953 21697;21698;21699;21700 21699 4 NQGGYGGSSSSSSYGSGR Unmodified 1693.6928 0.69281896 180 P09651;F8W6I7;P09651-3;P09651-2;H0YH80 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 1 30.115 33.439 2 8.7047E-07 6655 Miao_Sh-H9_proteinG_mass3_141226_01 80.596 69.146 0 0 0 0 0 0 0 0 0 0 0 0 0 2144 180 2100 19954;19955;19956 21701;21702;21703 21703 3 NQILNLTTDNANILLQIDNAR Unmodified 2366.2554 0.25538642 104 P13645;CON__P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 3 1 1 1 2 4 2 105.41 99.1 2;3 8.1941E-78 22515 Miao_Sh-H9_Flag_mass3_141226_01 180.04 143.82 157110 0 0 0 19205 19763 34069 0 25463 0 25718 32891 0 + 2145 104 2101 19957;19958;19959;19960;19961;19962;19963;19964;19965;19966;19967;19968;19969;19970;19971;19972;19973;19974 21704;21705;21706;21707;21708;21709;21710;21711;21712;21713;21714;21715;21716;21717;21718;21719;21720;21721;21722;21723;21724;21725;21726;21727 21713 23 NQLTSNPENTVFDAK Unmodified 1676.8006 0.8005785 355 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 2 2 4 3 2 4 2 2 2 2 10 58.659 59.396 2;3 2.8366E-42 15050 Miao_Sh-H9_proteinG_mass3_141226_03 171.26 117.89 302450 18414 20272 21258 4867.7 16437 30844 37110 37926 44153 35890 35094 184.74 2146 355 2102 19975;19976;19977;19978;19979;19980;19981;19982;19983;19984;19985;19986;19987;19988;19989;19990;19991;19992;19993;19994;19995;19996;19997;19998;19999;20000;20001;20002;20003;20004;20005;20006;20007;20008;20009;20010;20011;20012;20013;20014;20015;20016 21728;21729;21730;21731;21732;21733;21734;21735;21736;21737;21738;21739;21740;21741;21742;21743;21744;21745;21746;21747;21748;21749;21750;21751;21752;21753;21754;21755;21756;21757;21758;21759;21760;21761;21762;21763;21764;21765;21766;21767;21768;21769;21770;21771;21772;21773;21774;21775;21776;21777;21778;21779;21780;21781;21782;21783;21784;21785;21786;21787;21788;21789;21790;21791;21792;21793;21794;21795;21796;21797;21798;21799;21800;21801;21802;21803;21804;21805 21799 78 NQSLLASSEWPELR Unmodified 1628.8158 0.81583463 664 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 98.067 85.887 2 0.037387 30449 Miao_Sh-H9_proteinG_mass3_141226_01 44.252 26.179 0 0 0 0 0 0 0 0 0 0 0 0 0 2147 664 2103 20017 21806 21806 1 NQSQGYNQWQQGQFWGQK Unmodified 2210.9882 0.98821312 536 Q00839;Q00839-2 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 2 1 2 3 4 4 70.677 70.358 2;3 8.1482E-16 20068 Miao_Sh-H9_proteinG_mass3_141226_03 116.96 109.31 34726 0 0 660.23 0 0 7334.8 1199 0 9036.6 8500.1 813.75 7181 2148 536 2104 20018;20019;20020;20021;20022;20023;20024;20025;20026;20027;20028;20029;20030;20031;20032;20033;20034;20035 21807;21808;21809;21810;21811;21812;21813;21814;21815;21816;21817;21818;21819;21820 21820 14 NQVALNPQNTVFDAK Unmodified 1657.8424 0.84238373 343 P08107;P08107-2 HSPA1A Heat shock 70 kDa protein 1A/1B yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 2 61.548 63.19 2 1.3237E-07 16381 Miao_Sh-H9_proteinG_mass3_141226_03 86.548 73.593 5616.5 1080.1 0 1237.3 0 0 0 0 0 0 0 1676.9 1622.1 2149 343 2105 20036;20037;20038;20039;20040;20041;20042;20043;20044 21821;21822;21823;21824;21825;21826;21827;21828 21828 8 NQVAMNPTNTVFDAK Unmodified 1648.7879 0.78790532 356 P11142;E9PKE3;P11142-2;E9PNE6;E9PLF4;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25 HSPA8 Heat shock cognate 71 kDa protein yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 59.962 62.343 2 0.00064942 9903 Miao_Sh-H9_Flag_mass3_141226_01 71.354 64.091 3579 0 0 0 690.69 0 323.02 2057.5 0 0 0 0 507.8 2150 356 2106 20045;20046;20047;20048;20049 21829;21830;21831 21830 3 NREPVQLETLSIR Unmodified 1553.8526 0.85255449 506 P62314;J3QLI9 SNRPD1 Small nuclear ribonucleoprotein Sm D1 yes no 0 0 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 3 1 2 3 1 2 2 1 4 2 67.603 67.054 3 5.2349E-12 9063 Miao_Sh-c_Flag_mass3_141226_01 102.52 72.97 45998 3418.5 3981 1789.9 0 0 7547.5 3856.8 5027.9 4013.9 5430.4 4697.2 6234.9 2151 506 2107 20050;20051;20052;20053;20054;20055;20056;20057;20058;20059;20060;20061;20062;20063;20064;20065;20066;20067;20068;20069;20070;20071;20072 21832;21833;21834;21835;21836;21837;21838;21839;21840;21841;21842;21843;21844;21845;21846;21847;21848;21849;21850 21832 16 NRPAPYSRPK Unmodified 1184.6414 0.6414395 139 Q86V81;E9PB61 ALYREF THO complex subunit 4 yes no 0 0 0 0 2 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 25.595 26.046 3 0.019385 2556 Miao_Sh-c_Flag_mass3_141226_02 75.197 53.825 0 0 0 0 0 0 0 0 0 0 0 0 0 2152 139 2108 20073 21851 21851 1 NRPPFGQGYTQPGPGYR Unmodified 1890.9125 0.91252898 627 Q92734;Q92734-2 TFG Protein TFG yes no 0 0 0 0 1 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 1 1 2 1 2 1 1 2 1 48.267 50.635 3 3.0275E-08 6152 Miao_Sh-c_proteinG_mass3_141226_01 112.12 90.97 38637 113.01 0 333.13 6050.8 4028.4 7337.9 0 232.14 0 5530.7 7261.1 7749.8 2153 627 2109 20074;20075;20076;20077;20078;20079;20080;20081;20082;20083;20084;20085 21852;21853;21854;21855;21856;21857;21858;21859;21860;21861;21862 21853 11 NSILFLNSLDAK Unmodified 1333.7242 0.72416608 609 Q8IXB1 DNAJC10 DnaJ homolog subfamily C member 10 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 1 102.92 94.917 2 0.00016386 33006 Miao_Sh-H9_proteinG_mass3_141226_01 124.07 83.737 35403 791.71 1809.7 0 0 0 4855.5 0 2321.8 0 14199 6034.4 5391.4 2154 609 2110 20086;20087;20088;20089;20090;20091;20092;20093 21863;21864;21865;21866;21867;21868;21869;21870;21871 21867 9 NSLESYAFNMK Unmodified 1302.5914 0.59143734 356 P11142;E9PKE3;E9PNE6;A8K7Q2;E9PS65;E9PM13 HSPA8 Heat shock cognate 71 kDa protein yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 69.504 69.554 2 0.0030305 13209 Miao_Sh-H9_Flag_mass3_141226_03 88.338 71.221 0 0 0 0 0 0 0 0 0 0 0 0 0 2155 356 2111 20094 21872 21872 1 NSLQEQQEEEEEAR Unmodified 1717.7391 0.73910045 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 36.077 38.458 2 0.040776 7650 Miao_Sh-H9_proteinG_mass3_141226_03 47.037 34.836 914.94 0 0 0 0 0 0 0 0 0 0 439.47 475.46 2156 434 2112 20095;20096 21873 21873 1 NSLQEQQEEEEEARK Unmodified 1845.8341 0.83406347 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 3 33.512 35.593 2;3 9.4123E-09 6785 Miao_Sh-H9_proteinG_mass3_141226_03 127.62 106.07 21965 0 187.85 0 0 196.8 4359.3 0 242.03 0 5445.6 3149.5 8383.6 2157 434 2113 20097;20098;20099;20100;20101;20102;20103;20104;20105 21874;21875;21876;21877;21878;21879;21880 21878 7 NSNPALNDNLEK Unmodified 1327.6368 0.63680763 263 O00299 CLIC1 Chloride intracellular channel protein 1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 2 40.177 42.042 2 0.0026472 9095 Miao_Sh-H9_proteinG_mass3_141226_03 85.672 62.528 6909.4 153.62 0 27.3 0 0 0 0 0 0 0 2361.6 4366.9 2158 263 2114 20106;20107;20108;20109;20110;20111 21881;21882;21883 21883 3 NSSYFVEWIPNNVK Unmodified 1695.8257 0.82567103 338;530;566;315;642;564 P07437;Q5JP53;Q5ST81;E9PBJ4;P68371;Q9BVA1;Q13885;P04350;Q9BUF5;K7ESM5;Q13509;Q13509-2 TUBB;TUBB4B;TUBB2B;TUBB2A;TUBB4A;TUBB6;TUBB3 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-4A chain;Tubulin beta-6 chain;Tubulin beta-3 chain no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 2 2 2 5 2 3 6 2 2 1 2 92.167 88.761 2;3 5.1285E-94 19624 Miao_Sh-H9_Flag_mass3_141226_02 206.45 142.33 180390 25018 19582 19988 21350 0 0 40726 11876 32295 6141.3 1034 2377.3 2159 338;530;566;315;642;564 2115 20112;20113;20114;20115;20116;20117;20118;20119;20120;20121;20122;20123;20124;20125;20126;20127;20128;20129;20130;20131;20132;20133;20134;20135;20136;20137;20138;20139;20140 21884;21885;21886;21887;21888;21889;21890;21891;21892;21893;21894;21895;21896;21897;21898;21899;21900;21901;21902;21903;21904;21905;21906;21907;21908;21909;21910;21911;21912;21913;21914;21915;21916;21917;21918;21919;21920;21921;21922;21923;21924;21925;21926;21927;21928;21929;21930;21931;21932;21933;21934;21935;21936;21937;21938 21925 55 NSYLEVLLK Unmodified 1077.607 0.60701105 57 Q15084;Q15084-3;F8WA83;B5MCQ5;Q15084-2 PDIA6 Protein disulfide-isomerase A6 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 83.829 83.026 2 0.053717 17935 Miao_Sh-H9_Flag_mass3_141226_02 53.597 30.956 0 0 0 0 0 0 0 0 0 0 0 0 0 2160 57 2116 20141 21939 21939 1 NTGIICTIGPASR Unmodified 1358.6976 0.69763375 368 P14618;P14618-2;H3BTN5;H3BQ34;H3BT25;H3BUW1;H3BTJ2;H3BU13 PKM Pyruvate kinase PKM;Pyruvate kinase yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 2 1 1 2 56.048 57.847 2 3.3329E-05 8618 Miao_Sh-H9_Flag_mass3_141226_02 112.02 89.979 16346 1430 0 0 3106.9 1303.2 3052.4 0 369.2 282.1 1012.7 5789.4 0 2161 368 2117 20142;20143;20144;20145;20146;20147;20148;20149;20150;20151 21940;21941;21942 21942 3 NTGVILANDANAER Unmodified 1456.727 0.72701962 455 P46087;P46087-2;P46087-4;P46087-3 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 44.408 47.465 2 0.00031304 10797 Miao_Sh-H9_proteinG_mass3_141226_03 76.358 38.054 0 0 0 0 0 0 0 0 0 0 0 0 0 2162 455 2118 20152 21943 21943 1 NTLLIAGLQAR Unmodified 1168.6928 0.69280637 136 P39656;E7EWT1 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 68.959 69.21 2 0.016157 19936 Miao_Sh-H9_proteinG_mass3_141226_01 62.528 37.675 1324 0 0 0 0 0 0 0 0 0 1324 0 0 2163 136 2119 20153 21944 21944 1 NTNPNFVR Unmodified 960.47773 0.47772821 433;434 P35579;P35579-2;P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH9;MYH10 Myosin-9;Myosin-10 no no 0 0 0 0 0 By matching By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1 1 35.425 36.54 2 3.3689E-12 7453 Miao_Sh-H9_proteinG_mass3_141226_02 163.2 91.907 48239 0 744.22 877.79 0 0 12854 32.807 863.23 829.4 10815 11597 9626.6 2164 433;434 2120 20154;20155;20156;20157;20158;20159;20160;20161;20162;20163 21945;21946;21947;21948;21949;21950;21951;21952;21953;21954;21955;21956;21957;21958;21959;21960;21961 21958 17 NTVVPTK Unmodified 757.4334 0.43340378 355 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 28.271 28.233 2 0.030554 3147 Miao_Sh-c_Flag_mass3_141226_01 81.642 37.265 420.96 165.64 0 0 57.747 0 0 16.283 0 181.28 0 0 0 2165 355 2121 20164;20165;20166;20167 21962 21962 1 NVFDEAILAALEPPEPK Unmodified 1851.9618 0.96183016 133 P60953;E7ETU3 CDC42 Cell division control protein 42 homolog yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 1 2 1 109.52 107.21 3 0.0028058 26590 Miao_Sh-H9_Flag_mass3_141226_02 52.019 35.023 0 0 0 0 0 0 0 0 0 0 0 0 0 2166 133 2122 20168;20169;20170;20171;20172 21963;21964;21965;21966;21967 21965 5 NVFIIGATNRPDIIDPAILRPGR Unmodified 2517.418 0.4179755 483 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 2 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 4 1 2 2 1 87.192 87.342 3;4 2.4031E-26 19162 Miao_Sh-H9_Flag_mass3_141226_02 121.46 115.1 66918 3960.6 12874 488.18 0 0 0 25462 24133 0 0 0 0 2167 483 2123 20173;20174;20175;20176;20177;20178;20179;20180;20181;20182;20183 21968;21969;21970;21971;21972;21973;21974;21975;21976;21977;21978;21979;21980;21981 21977 14 NVGESVAAALSPLGIEVDIDVEHGGK Unmodified 2575.313 0.31296088 563 Q13501;Q13501-2;E7EMC7 SQSTM1 Sequestosome-1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 2 100.79 100.65 3 1.3829E-13 24123 Miao_Sh-H9_Flag_mass3_141226_03 72.474 57.439 0 0 0 0 0 0 0 0 0 0 0 0 0 2168 563 2124 20184;20185;20186 21982;21983;21984 21983 3 NVGESVAAALSPLGIEVDIDVEHGGKR Unmodified 2731.4141 0.41407191 563 Q13501;Q13501-2;E7EMC7 SQSTM1 Sequestosome-1 yes no 0 0 0 0 1 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 94.582 95.885 4 1.5323E-21 19954 Miao_Sh-c_Flag_mass3_141226_03 89.71 80.144 3291.3 0 0 3291.3 0 0 0 0 0 0 0 0 0 2169 563 2125 20187 21985;21986 21986 2 NVGLDIEAEVPAVK Unmodified 1452.7824 0.78240924 469 P50990;P50990-2;P50990-3;H7C2U0 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 2 1 80.004 74.641 2 0.00032619 25837 Miao_Sh-H9_proteinG_mass3_141226_01 80.632 65.26 4646.2 0 0 0 1803.1 0 0 0 0 0 2843 0 0 2170 469 2126 20188;20189;20190;20191 21987;21988;21989;21990;21991 21991 5 NVGQFSGFPFEK Unmodified 1355.651 0.65100113 436 P35659;B4DFG0;P35659-2;D6RDA2;D6R9L5 DEK Protein DEK yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS 1 2 1 1 58.048 56.67 2 0.0017218 15886 Miao_Sh-c_proteinG_mass3_141226_02 93.348 66.562 3431 0 0 0 182.95 201.5 1303.2 0 0 0 0 0 1743.3 2171 436 2127 20192;20193;20194;20195;20196 21992;21993;21994 21992 3 NVIEAVYSR Unmodified 1049.5506 0.55055881 297;296 O75688-2;C9JIR6;O75688-4;B8ZZF0;O75688;O75688-3 PPM1B Protein phosphatase 1B no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 2 55.668 55.517 2 4.0221E-08 8227 Miao_Sh-H9_Flag_mass3_141226_03 129.89 63.197 68818 10766 10161 0 0 0 0 28005 19886 0 0 0 0 2172 297;296 2128 20197;20198;20199;20200;20201;20202;20203 21995;21996;21997;21998;21999;22000;22001 22001 7 NVLIVEDIIDTGK Unmodified 1427.7872 0.78716026 310 P00492 HPRT1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 110.39 101.37 2 0.019729 35420 Miao_Sh-H9_proteinG_mass3_141226_02 50.088 24.529 0 0 0 0 0 0 0 0 0 0 0 0 0 2173 310 2129 20204 22002 22002 1 NVNVQNFHISWK Unmodified 1484.7524 0.75244651 283 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 67.819 69.335 3 0.0097803 13384 Miao_Sh-c_proteinG_mass3_141226_01 54.343 31.225 23838 0 0 0 11661 0 742.32 4197 7238 0 0 0 0 2174 283 2130 20205;20206;20207;20208 22003 22003 1 NVPYVFVR Unmodified 992.54435 0.54435122 16 P55769;B1AHD1 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 2 62.816 64.462 2 0.034467 17364 Miao_Sh-H9_proteinG_mass3_141226_03 64.567 36.393 7250.1 519.25 0 0 1369.9 0 2129.4 1120.5 0 0 1454.1 0 657.03 2175 16 2131 20209;20210;20211;20212;20213;20214;20215 22004;22005 22005 2 NVQALEIELQSQLALK Unmodified 1796.0044 0.0043636815 104 P13645;CON__P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 2 1 4 3 2 107.25 98.132 2;3 1.0675E-63 35817 Miao_Sh-H9_proteinG_mass3_141226_01 197.29 139.5 113920 0 0 0 7929.2 2945 16614 0 0 10452 40910 16620 18445 + 2176 104 2132 20216;20217;20218;20219;20220;20221;20222;20223;20224;20225;20226;20227;20228;20229;20230;20231;20232;20233;20234 22006;22007;22008;22009;22010;22011;22012;22013;22014;22015;22016;22017;22018;22019;22020;22021;22022;22023;22024;22025;22026;22027;22028;22029;22030;22031;22032;22033;22034;22035;22036;22037;22038 22023 33 NVQDAIADAEQR Unmodified 1328.6321 0.6320566 108 P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 2 1 2 2 2 2 53.004 55.141 2;3 0.0011411 8120 Miao_Sh-H9_Flag_mass3_141226_02 78.287 51.501 18755 0 0 483.6 0 0 4782.3 1125.8 904.81 3975.7 0 3754.4 3728.4 + 2177 108 2133 20235;20236;20237;20238;20239;20240;20241;20242;20243;20244;20245;20246 22039;22040;22041;22042;22043;22044;22045 22041 7 NVQGIIEILK Unmodified 1125.6758 0.67575932 449 P42704;B8ZZ38 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 80.237 81.691 2 0.050306 17272 Miao_Sh-c_proteinG_mass3_141226_01 49.3 28.523 0 0 0 0 0 0 0 0 0 0 0 0 0 2178 449 2134 20247 22046 22046 1 NVTDVVNTCHDAGISK Unmodified 1728.8101 0.81009732 680 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 46.973 47.925 3 0.021385 11670 Miao_Sh-H9_proteinG_mass3_141226_01 41.695 28.687 0 0 0 0 0 0 0 0 0 0 0 0 0 2179 680 2135 20248 22047 22047 1 NVTELNEPLSNEER Unmodified 1642.7798 0.77984305 495 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching 2 1 1 1 3 2 1 51.985 53.557 2 5.1582E-38 13954 Miao_Sh-H9_proteinG_mass3_141226_01 170.74 147.25 21385 1205 886.21 0 0 0 3960.5 0 0 1521 659.35 3489.2 9663.8 2180 495 2136 20249;20250;20251;20252;20253;20254;20255;20256;20257;20258;20259 22048;22049;22050;22051;22052;22053;22054;22055 22052 8 NVTLPAVFK Unmodified 987.57532 0.57531699 438 P36578;H3BTP7;H3BU31 RPL4 60S ribosomal protein L4 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1 69.465 71.257 2 0.0023984 19985 Miao_Sh-H9_proteinG_mass3_141226_03 95.311 45.775 90483 0 3286.3 0 0 9532.1 34601 0 3404.5 5290 10016 10970 13384 2181 438 2137 20260;20261;20262;20263;20264;20265;20266;20267;20268 22056;22057;22058;22059;22060;22061;22062;22063;22064 22063 9 NVVVVDGVR Unmodified 955.54508 0.5450795 484 P55084;P55084-2;B5MD38;F5GZQ3;C9JEY0;C9JE81;C9K0M0 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 42.843 45.8 2 0.018002 10305 Miao_Sh-H9_proteinG_mass3_141226_03 71.451 37.9 0 0 0 0 0 0 0 0 0 0 0 0 0 2182 484 2138 20269 22065 22065 1 NYDIGAALDTIQYSK Unmodified 1670.8152 0.81516593 563 Q13501;Q13501-2 SQSTM1 Sequestosome-1 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 3 1 2 1 80.06 80.691 2;3 6.7916E-37 17378 Miao_Sh-H9_Flag_mass3_141226_02 125.45 101.98 28361 6936.5 4081.2 0 0 999.66 0 8929.5 7414.4 0 0 0 0 2183 563 2139 20270;20271;20272;20273;20274;20275;20276;20277 22066;22067;22068;22069;22070;22071;22072;22073 22073 7 NYDPYKPLDITPPPDQK Unmodified 1999.9891 0.98910755 664 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 62.967 65.345 3 0.017832 17844 Miao_Sh-H9_proteinG_mass3_141226_02 45.876 34.777 1531.9 0 0 0 0 0 0 0 0 0 0 1531.9 0 2184 664 2140 20278 22074 22074 1 NYILDQTNVYGSAQR Unmodified 1740.8431 0.84311201 643 Q9BUJ2;Q9BUJ2-2;B7Z4B8;Q9BUJ2-4;M0R3F1;Q9BUJ2-3 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 3 3 3 2 3 4 2 61.809 63.898 2;3 3.2173E-130 17298 Miao_Sh-H9_proteinG_mass3_141226_02 233.02 188.83 208160 0 1549.3 0 23584 20490 37124 0 2043.3 0 48541 39070 35761 2185 643 2141 20279;20280;20281;20282;20283;20284;20285;20286;20287;20288;20289;20290;20291;20292;20293;20294;20295;20296;20297;20298;20299;20300 22075;22076;22077;22078;22079;22080;22081;22082;22083;22084;22085;22086;22087;22088;22089;22090;22091;22092;22093;22094;22095;22096;22097;22098;22099;22100;22101;22102;22103;22104;22105 22097 31 NYIQGINLVQAK Unmodified 1359.751 0.75104953 474 P52815;B4DLN1 MRPL12 39S ribosomal protein L12, mitochondrial yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 66.537 67.815 2 0.0015584 19318 Miao_Sh-H9_proteinG_mass3_141226_01 91.961 65.844 0 0 0 0 0 0 0 0 0 0 0 0 0 2186 474 2142 20301;20302;20303;20304 22106;22107;22108;22109 22107 4 NYSPYYNTIDDLK Unmodified 1604.7359 0.73585297 432 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 1 2 4 6 1 1 7 5 4 76.767 73.439 2;3 2.7352E-45 20310 Miao_Sh-H9_proteinG_mass3_141226_01 186.67 157.32 331160 2741.9 4085.7 1201.2 53902 38023 43481 0 4171.8 1401 109150 57434 15569 + 2187 432 2143 20305;20306;20307;20308;20309;20310;20311;20312;20313;20314;20315;20316;20317;20318;20319;20320;20321;20322;20323;20324;20325;20326;20327;20328;20329;20330;20331;20332;20333;20334;20335;20336;20337;20338 22110;22111;22112;22113;22114;22115;22116;22117;22118;22119;22120;22121;22122;22123;22124;22125;22126;22127;22128;22129;22130;22131;22132;22133;22134;22135;22136;22137;22138;22139;22140;22141;22142;22143;22144;22145;22146;22147;22148;22149;22150;22151;22152;22153;22154;22155;22156;22157;22158;22159;22160;22161;22162;22163;22164;22165;22166;22167 22136 58 NYTDEAIETDDLTIK Unmodified 1739.8101 0.81014013 269 O14818;O14818-2;H0Y586 PSMA7 Proteasome subunit alpha type-7 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 68.432 67.981 2 0.002515 12418 Miao_Sh-H9_Flag_mass3_141226_01 62.525 55.838 0 0 0 0 0 0 0 0 0 0 0 0 0 2188 269 2144 20339 22168 22168 1 NYYEQWGK Unmodified 1086.4771 0.47705951 397 P22626;P22626-2 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 51.598 53.436 2 0.031515 13068 Miao_Sh-H9_proteinG_mass3_141226_02 73.665 41.31 17785 311.78 1073 0 1069.6 0 5407.6 0 0 0 5501.2 4422.2 0 2189 397 2145 20340;20341;20342;20343;20344;20345 22169;22170;22171;22172 22170 3 PAGPPGILALLDEECWFPK Unmodified 2109.0605 0.060498352 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 2 1 1 2 4 2 115.14 116.28 3 3.7072E-11 29923 Miao_Sh-H9_Flag_mass3_141226_02 111.22 87.586 22955 563.71 4168.4 3388.7 3093.9 7296.8 0 289.08 4154.7 0 0 0 0 2190 433 2146 20346;20347;20348;20349;20350;20351;20352;20353;20354;20355;20356;20357;20358 22173;22174;22175;22176;22177;22178;22179;22180;22181 22180 8 PALPAGTEDTAK Unmodified 1169.5928 0.59281755 329 P06396;P06396-2;P06396-4;P06396-3;Q5T0H9;CON__Q3SX14;Q5T0I0 GSN Gelsolin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 1 2 1 36.331 38.799 2 0.00672 8385 Miao_Sh-H9_proteinG_mass3_141226_01 65.179 47.948 0 0 0 0 0 0 0 0 0 0 0 0 0 + 2191 329 2147 20359;20360;20361;20362 22182;22183;22184;22185 22183 4 PANPPGLLALLDEECWFPK Unmodified 2166.082 0.081962076 158 Q7Z406;F2Z2U8;G8JLL9;Q7Z406-6;Q7Z406-2;Q7Z406-5;Q7Z406-4;M0QY43 MYH14 Myosin-14 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 115.73 116.17 3 0.0084452 27562 Miao_Sh-c_Flag_mass3_141226_02 42.118 33.993 5440.2 883.15 1862.3 784.54 0 0 0 0 1910.3 0 0 0 0 2192 158 2148 20363;20364;20365;20366 22186;22187;22188 22187 3 PASGPIRPIVR Unmodified 1161.6982 0.6982261 414 P26373;P26373-2;J3QSB4 RPL13 60S ribosomal protein L13 yes no 0 0 0 0 1 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 1 2 2 3 4 49.385 47.923 2;3 0.0020612 8880 Miao_Sh-H9_proteinG_mass3_141226_03 96.957 62.704 125350 2707.5 2342.4 2364.5 2564.1 2446.1 8174.2 4732 5239.4 0 28918 32316 33544 2193 414 2149 20367;20368;20369;20370;20371;20372;20373;20374;20375;20376;20377;20378;20379;20380;20381;20382;20383;20384;20385 22189;22190;22191;22192;22193;22194;22195;22196;22197;22198;22199;22200;22201;22202;22203;22204;22205;22206;22207;22208;22209 22207 21 PATPEIQEIVDK Unmodified 1338.7031 0.70309628 71 P01040;C9J0E4 CSTA Cystatin-A;Cystatin-A, N-terminally processed yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 61.528 62.781 2 0.0010672 10310 Miao_Sh-c_proteinG_mass3_141226_01 80.96 54.842 0 0 0 0 0 0 0 0 0 0 0 0 0 2194 71 2150 20386 22210 22210 1 PEFLEDPSVLTK Unmodified 1373.7078 0.70784731 196 P42167;P42167-2;G5E972;P42166;A2T926 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 71.189 72.308 2 0.01905 21235 Miao_Sh-H9_proteinG_mass3_141226_01 58.04 43.805 3663.4 0 0 0 0 954.21 0 1125.8 0 0 1583.4 0 0 2195 196 2151 20387;20388;20389 22211 22211 1 PFLLPVEAVYSVPGR Unmodified 1642.9083 0.90827845 465 P49411 TUFM Elongation factor Tu, mitochondrial yes yes 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 2 1 1 1 1 1 101.94 97.9 2;3 4.1479E-05 37372 Miao_Sh-H9_proteinG_mass3_141226_01 79.875 65.789 22719 2145.7 974.69 0 3603.2 0 0 2089.8 2414.1 0 6763 441 4287 2196 465 2152 20390;20391;20392;20393;20394;20395;20396;20397;20398 22212;22213;22214;22215 22215 4 PFLWLAR Unmodified 901.51741 0.51740818 58 P62826;B5MDF5;J3KQE5;F5H018;B4DV51 RAN GTP-binding nuclear protein Ran yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 1 83.249 84.101 2 0.0034576 17814 Miao_Sh-c_proteinG_mass3_141226_02 121.68 59.687 9557.6 1451.3 719.13 0 0 2269.2 0 2461.9 2656 0 0 0 0 2197 58 2153 20399;20400;20401;20402;20403;20404;20405 22216;22217;22218;22219;22220;22221 22218 6 PGFSIADK Unmodified 833.42832 0.42831841 520 P62913;P62913-2;Q5VVC8 RPL11 60S ribosomal protein L11 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 1 44.974 46.923 2 0.0017306 10963 Miao_Sh-H9_proteinG_mass3_141226_02 117.89 62.214 13805 358.72 0 263.43 277.2 0 4078.7 0 0 604.34 729.41 4094.8 3398.7 2198 520 2154 20406;20407;20408;20409;20410;20411;20412;20413 22222;22223 22222 2 PGLNVVLEGPK Unmodified 1121.6445 0.64445919 222 Q99848;H7C2Q8 EBNA1BP2 Probable rRNA-processing protein EBP2 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 60.744 63.066 2 0.0041539 16803 Miao_Sh-H9_proteinG_mass3_141226_03 87.667 56.07 3030.5 0 179.83 0 0 1133.9 0 0 0 0 0 0 1716.8 2199 222 2155 20414;20415;20416;20417 22224;22225;22226;22227 22226 4 PGPGVWDPNWDR Unmodified 1394.6367 0.63674805 633 Q96HS1;Q96HS1-2 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 1 1 68.693 71.375 2 0.014904 20057 Miao_Sh-H9_proteinG_mass3_141226_02 57.175 36.115 0 0 0 0 0 0 0 0 0 0 0 0 0 2200 633 2156 20418;20419 22228;22229 22228 2 PGPTAESASGPSEDPSVNFLK Unmodified 2085.9855 0.98547873 563 Q13501;Q13501-2;E7EMC7;E9PFW8 SQSTM1 Sequestosome-1 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 2 6 1 3 6 2 1 67.431 66.117 2;3 8.7155E-35 11894 Miao_Sh-H9_Flag_mass3_141226_01 142.86 123.18 27210 4142.3 4155 0 0 0 460.92 7397.2 0 10765 0 0 289.08 2201 563 2157 20420;20421;20422;20423;20424;20425;20426;20427;20428;20429;20430;20431;20432;20433;20434;20435;20436;20437;20438;20439;20440;20441 22230;22231;22232;22233;22234;22235;22236;22237;22238;22239;22240;22241;22242;22243;22244;22245;22246;22247;22248;22249;22250;22251;22252;22253;22254 22241 25 PLAEGPQVTGPIEVPAAR Unmodified 1800.9734 0.9733979 208 P52943;H0YFA4;P52943-2 CRIP2 Cysteine-rich protein 2 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 2 2 2 1 1 2 2 9 67.333 67.939 2;3 9.2244E-24 18691 Miao_Sh-H9_proteinG_mass3_141226_02 135.95 119.28 20804 2157.7 1922.8 2228.2 0 1339.6 0 0 0 2305.1 4136.2 6713.9 0 2202 208 2158 20442;20443;20444;20445;20446;20447;20448;20449;20450;20451;20452;20453;20454;20455;20456;20457;20458;20459;20460;20461;20462;20463;20464 22255;22256;22257;22258;22259;22260;22261;22262;22263;22264;22265;22266;22267;22268;22269;22270;22271;22272;22273;22274 22269 20 PLENLEEEGLPK Unmodified 1366.698 0.6980109 69 Q15008;C9IZE4;C9J7B7 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 63.255 62.904 2 0.0040919 10444 Miao_Sh-H9_Flag_mass3_141226_01 69.03 45.711 0 0 0 0 0 0 0 0 0 0 0 0 0 2203 69 2159 20465 22275 22275 1 PLISVYSEK Unmodified 1034.5648 0.56481189 438 P36578;H3BTP7;H3BU31 RPL4 60S ribosomal protein L4 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 1 4 1 2 3 2 1 54.56 56.326 2 6.7546E-08 14728 Miao_Sh-H9_proteinG_mass3_141226_01 126.31 62.894 41958 1633.3 2379.7 0 2986.2 5183.7 571.67 4137.3 0 0 1001 14390 9674.7 2204 438 2160 20466;20467;20468;20469;20470;20471;20472;20473;20474;20475;20476;20477;20478;20479;20480;20481;20482;20483;20484 22276;22277;22278;22279;22280;22281;22282;22283;22284;22285;22286;22287;22288 22284 13 PLLGDQSHAGSELLQR Unmodified 1719.8904 0.89039656 555 Q12933;Q12933-4;Q12933-3;Q12933-2 TRAF2 TNF receptor-associated factor 2 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 3 1 58.751 59.302 3 3.0336E-09 9296 Miao_Sh-H9_Flag_mass3_141226_01 103.13 73.588 9203.5 2633.6 0 2902.2 0 0 0 0 0 3667.6 0 0 0 2205 555 2161 20485;20486;20487;20488;20489;20490;20491 22289;22290;22291;22292;22293;22294;22295;22296;22297;22298 22292 10 PLLQVSR Unmodified 811.49159 0.49158736 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 39.347 45.713 2 0.018677 9671 Miao_Sh-c_proteinG_mass3_141226_03 96.19 10.926 0 0 0 0 0 0 0 0 0 0 0 0 0 2206 433 2162 20492 22299 22299 1 PLPSFCPPR Unmodified 1069.5379 0.53788563 595 Q5T749 KPRP Keratinocyte proline-rich protein yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 58.197 60.603 2 0.026373 16074 Miao_Sh-H9_proteinG_mass3_141226_02 65.224 40.449 0 0 0 0 0 0 0 0 0 0 0 0 0 2207 595 2163 20493 22300 22300 1 PLPVEYLIIDITTTFPK Unmodified 1959.0969 0.096867083 613 Q8TAT6;Q8TAT6-2;I3L3I1;B4DG89 NPLOC4 Nuclear protein localization protein 4 homolog yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 119.8 121.4 3 4.2113E-07 29759 Miao_Sh-c_Flag_mass3_141226_01 82.349 69.857 43880 3365.6 2173.6 0 0 38341 0 0 0 0 0 0 0 2208 613 2164 20494;20495;20496;20497 22301;22302;22303;22304 22301 4 PLRLPLQDVYK Unmodified 1340.7816 0.78162138 527 P68104;Q5VTE0;Q05639 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 2 yes no 0 0 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 1 1 1 2 1 1 80.644 77.547 3 8.5133E-05 35461 Miao_Sh-H9_proteinG_mass3_141226_02 128.88 81.693 48965 2456.5 0 1578.8 3037.5 4220.8 6654.1 3205.9 5746.2 6190.6 5566.1 4006.6 6301.6 2209 527 2165 20498;20499;20500;20501;20502;20503;20504;20505;20506;20507;20508;20509;20510;20511 22305;22306;22307;22308;22309;22310;22311;22312;22313;22314;22315;22316;22317;22318;22319;22320;22321;22322;22323;22324;22325;22326;22327;22328 22325 24 PLSSVQENIQQK Unmodified 1369.7201 0.72014333 473 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 44.684 45.862 2 0.046928 4477 Miao_Sh-c_Flag_mass3_141226_02 49.448 28.076 1950.6 217.1 209.88 23.4 0 0 0 0 0 0 0 0 1500.2 2210 473 2166 20512;20513;20514;20515 22329 22329 1 PLYVALAQR Unmodified 1029.5971 0.59711507 359 P11940;P11940-2;E7EQV3;E7ERJ7;H0YAR2;Q9H361;Q4VXU2;H0YB86;H0Y5F5;H0YEU6 PABPC1;PABPC3;PABPC1L;PABPC4 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3;Polyadenylate-binding protein 1-like no no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 2 1 1 1 1 58.188 59.431 2 7.9434E-06 9316 Miao_Sh-H9_Flag_mass3_141226_01 132.08 86.404 22607 0 953.59 1523.3 1573.2 1359.3 0 3298.9 0 4055.7 3263.5 2973.3 3606.1 2211 359 2167 20516;20517;20518;20519;20520;20521;20522;20523;20524;20525 22330;22331;22332;22333;22334 22331 5 PMNIQLVTSQIDAQR Unmodified 1712.888 0.88795372 139 Q86V81;E9PB61 ALYREF THO complex subunit 4 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 77.554 77.002 3 3.2663E-06 15490 Miao_Sh-H9_Flag_mass3_141226_01 85.837 69.614 0 0 0 0 0 0 0 0 0 0 0 0 0 2212 139 2168 20526 22335 22335 1 PSLDDIIR Unmodified 927.50255 0.50254598 658 Q9NYY3 PLK2 Serine/threonine-protein kinase PLK2 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 52.16 53.33 2 0.05397 12755 Miao_Sh-H9_proteinG_mass3_141226_02 63.565 14.771 5151.7 0 0 0 0 0 0 0 0 2219.6 1466.1 1466.1 0 2213 658 2169 20527;20528;20529 22336 22336 1 PSPLLVGR Unmodified 837.50724 0.50723743 561;668 Q13283;E5RIZ6;E5RH00;D6R9X5;D6R9A4;D6RBM9;D6REX8;D6RBR0;E5RI46;E5RIF8;D6RE13;D6RBW8;E5RH42;D6RGJ4;D6RAC7;E5RJU8;D6RB17;Q5HYE9;Q9UN86;Q9UN86-2 G3BP1;G3BP2 Ras GTPase-activating protein-binding protein 1;Ras GTPase-activating protein-binding protein 2 no no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 47.52 48.553 2 0.00064686 11830 Miao_Sh-H9_proteinG_mass3_141226_01 129.55 63.878 10903 442.74 0 238.47 0 0 0 0 0 1013 5520.5 0 3688 2214 561;668 2170 20530;20531;20532;20533;20534 22337;22338;22339 22339 3 PSSSPVIFAGGQDR Unmodified 1416.6997 0.69974224 581 Q15366;Q15366-6;Q15366-3;Q15366-2;B4DLC0;H3BSS4 PCBP2 Poly(rC)-binding protein 2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 53.319 54.739 2 0.031657 12656 Miao_Sh-H9_proteinG_mass3_141226_03 49.188 32.525 3328.2 479.09 0 1218.3 0 0 0 0 0 0 0 0 1630.7 2215 581 2171 20535;20536;20537 22340;22341 22341 2 PVGSLAGIGEVLGK Unmodified 1295.7449 0.74490152 293 O75531 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 78.647 79.098 2 1.3903E-05 16262 Miao_Sh-c_proteinG_mass3_141226_01 110.44 90.684 0 0 0 0 0 0 0 0 0 0 0 0 0 2216 293 2172 20538;20539 22342;22343 22342 2 PVHLTAFLGYK Unmodified 1244.6917 0.69174374 443 P39023;H7C422;F8WCR1;H7C3M2 RPL3 60S ribosomal protein L3 yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 1 1 78.296 76.379 3 0.00043272 13430 Miao_Sh-c_proteinG_mass3_141226_01 100.88 71.825 20671 0 0 0 4521 3478 0 0 8769.4 0 3902.5 0 0 2217 443 2173 20540;20541;20542;20543;20544;20545 22344;22345;22346;22347;22348;22349;22350 22345 7 PVIVEPLEQLDDEDGLPEK Unmodified 2134.0681 0.06814573 399 P23246;P23246-2 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching 3 1 83.157 85.387 3 1.6338E-16 18242 Miao_Sh-c_proteinG_mass3_141226_02 98.572 87.152 0 0 0 0 0 0 0 0 0 0 0 0 0 2218 399 2174 20546;20547;20548;20549 22351;22352;22353;22354 22354 4 PVSSAASVYAGAGGSGSR Unmodified 1579.759 0.75904803 178 P05783;F8VZY9 KRT18 Keratin, type I cytoskeletal 18 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 2 1 42.974 44.105 2;3 2.3581E-05 10657 Miao_Sh-H9_proteinG_mass3_141226_01 71.263 65.228 5542.9 210.84 0 0 0 0 0 22.194 0 341.3 1374.5 2194.5 1399.6 2219 178 2175 20550;20551;20552;20553;20554;20555;20556;20557 22355;22356;22357;22358;22359;22360 22358 6 PVTTPEEIAQVATISANGDK Unmodified 2040.0375 0.037514303 354 P10809;E7ESH4;E7EXB4 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 85.932 73.752 3 1.3051E-17 25921 Miao_Sh-H9_proteinG_mass3_141226_01 101.23 81.102 2738.1 0 0 0 0 0 0 0 0 0 2738.1 0 0 2220 354 2176 20558 22361 22361 0 PWISLPR Unmodified 867.49667 0.49667274 511 P62701;P22090;Q8TD47;C9JEH7 RPS4X;RPS4Y1;RPS4Y2 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1;40S ribosomal protein S4, Y isoform 2 yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 2 1 1 1 1 1 70.089 71.2 2 6.562E-11 13625 Miao_Sh-c_proteinG_mass3_141226_01 162.07 62.147 20653 2076.4 0 0 7485.4 0 2537 2875.6 0 3728.6 1949.5 0 0 2221 511 2177 20559;20560;20561;20562;20563;20564;20565;20566;20567;20568 22362;22363;22364;22365;22366 22363 5 PYFLEAYRPIR Unmodified 1423.7612 0.76122028 483 P55072;C9JUP7;C9IZA5 VCP Transitional endoplasmic reticulum ATPase yes no 0 0 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 1 69.827 70.565 3 0.0033149 13214 Miao_Sh-H9_Flag_mass3_141226_01 91.549 60.263 80039 10228 10335 12260 2427.5 0 0 18107 26370 0 0 312.45 0 2222 483 2178 20569;20570;20571;20572;20573;20574;20575 22367;22368;22369;22370;22371 22370 2 PYFPIPEEYTFIQNVPLEDR Unmodified 2466.2107 0.21072764 536 Q00839;Q00839-2 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 116.01 103.83 3 0.00061244 37600 Miao_Sh-H9_proteinG_mass3_141226_01 54.74 38.109 0 0 0 0 0 0 0 0 0 0 0 0 0 2223 536 2179 20576 22372 22372 1 PYIQVDIGGGQTK Unmodified 1374.7143 0.71432967 355 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 2 2 1 1 2 1 63.344 61.311 2 3.4755E-08 8588 Miao_Sh-c_Flag_mass3_141226_03 72.898 53.701 13999 0 2894.8 2882.1 2404 0 0 0 0 2954.3 0 1381.9 1482 2224 355 2180 20577;20578;20579;20580;20581;20582;20583;20584;20585;20586 22373;22374;22375;22376;22377 22374 4 PYVEEGLHPQIIIR Unmodified 1662.9093 0.90934108 638 Q99832;Q99832-3;F5GZK5;Q99832-4;F8WAM2 CCT7 T-complex protein 1 subunit eta yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 1 67.767 65.701 3 9.7966E-05 12128 Miao_Sh-H9_Flag_mass3_141226_01 100.22 78.673 9156.1 2732.7 490.15 0 0 0 0 4295.6 624.98 0 0 1012.6 0 2225 638 2181 20587;20588;20589;20590;20591;20592 22378;22379;22380 22380 3 QAAPCVLFFDELDSIAK Unmodified 1922.9448 0.94479989 483 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 4 2 1 2 1 2 1 1 113.98 112.42 2;3 6.5491E-07 26036 Miao_Sh-c_Flag_mass3_141226_03 79.326 62.588 46481 0 1124.5 13360 0 673.8 0 11929 0 15708 1696.8 1989.7 0 2226 483 2182 20593;20594;20595;20596;20597;20598;20599;20600;20601;20602;20603;20604;20605;20606;20607;20608 22381;22382;22383;22384;22385;22386;22387;22388;22389;22390;22391;22392;22393;22394;22395;22396;22397;22398;22399;22400 22387 20 QAASSLQQASLK Unmodified 1230.6568 0.65681479 441 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 2 1 1 2 1 1 38.95 41.106 2;3 1.4794E-54 8993 Miao_Sh-H9_proteinG_mass3_141226_01 196.11 126.08 202980 230.16 0 0 3116.4 2382.1 71945 289.31 0 0 52585 36829 35604 2227 441 2183 20609;20610;20611;20612;20613;20614;20615;20616;20617;20618;20619 22401;22402;22403;22404;22405;22406;22407;22408;22409 22406 9 QADLYISEGLHPR Unmodified 1497.7576 0.75759147 444;624 P40227;B4DPJ8;Q92526;Q92526-3 CCT6A;CCT6B T-complex protein 1 subunit zeta;T-complex protein 1 subunit zeta-2 no no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 56.389 58.235 3 0.025473 14841 Miao_Sh-H9_proteinG_mass3_141226_02 43.613 32.861 7269.9 0 0 0 1098.6 900.52 0 780.18 0 0 656.64 2145.8 1688.1 2228 444;624 2184 20620;20621;20622;20623;20624;20625 22410;22411;22412;22413 22412 4 QAIPLDENEGIYVQDVK Unmodified 1929.9684 0.96837211 573 Q14764 MVP Major vault protein yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 8 5 9 74.193 68.905 2;3 1.8293E-56 24810 Miao_Sh-H9_proteinG_mass3_141226_02 187.56 155.04 168170 0 0 1168 44590 28103 0 2407 0 0 67081 14546 10275 2229 573 2185 20626;20627;20628;20629;20630;20631;20632;20633;20634;20635;20636;20637;20638;20639;20640;20641;20642;20643;20644;20645;20646;20647;20648;20649;20650;20651 22414;22415;22416;22417;22418;22419;22420;22421;22422;22423;22424;22425;22426;22427;22428;22429;22430;22431;22432;22433;22434;22435;22436;22437;22438;22439;22440;22441;22442;22443;22444;22445;22446;22447;22448;22449;22450;22451;22452 22437 39 QAQAAVLAVLPR Unmodified 1235.735 0.73500553 222 Q99848;H7C2Q8 EBNA1BP2 Probable rRNA-processing protein EBP2 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 1 1 71.435 70.181 2 0.0046302 19484 Miao_Sh-H9_proteinG_mass3_141226_03 74.962 43.365 9275.9 1361.6 0 1223.5 1138.7 0 1223.5 658.98 0 0 1617.2 0 2052.5 2230 222 2186 20652;20653;20654;20655;20656;20657;20658;20659 22453;22454;22455 22455 3 QAQEYEALLNIK Unmodified 1418.7405 0.74054442 178 P05783;F8VZY9 KRT18 Keratin, type I cytoskeletal 18 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 2 74.76 67.555 2 0.00070579 14856 Miao_Sh-H9_Flag_mass3_141226_01 113.07 81.958 0 0 0 0 0 0 0 0 0 0 0 0 0 2231 178 2187 20660;20661;20662;20663 22456;22457;22458;22459 22456 4 QAQIEVVPSASALIIK Unmodified 1665.9665 0.96652161 424 P30050 RPL12 60S ribosomal protein L12 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 2 1 2 2 4 1 91.016 82.653 2;3 9.5631E-06 15187 Miao_Sh-c_Flag_mass3_141226_01 81.148 63.455 34956 0 2310.3 0 0 2766.8 5788.6 0 0 3340.3 4471.3 13648 2629.9 2232 424 2188 20664;20665;20666;20667;20668;20669;20670;20671;20672;20673;20674;20675;20676;20677;20678;20679;20680 22460;22461;22462;22463;22464;22465;22466;22467;22468;22469;22470;22471;22472;22473;22474;22475;22476;22477;22478;22479;22480;22481;22482 22460 23 QAQQERDELADEIANSSGK Unmodified 2087.972 0.97195393 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 1 By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 1 2 52.614 54.857 3 2.2127E-107 14279 Miao_Sh-H9_proteinG_mass3_141226_01 212.76 175.08 78199 0 3706.7 917.32 6254.5 0 15160 0 0 0 24975 13177 14009 2233 433 2189 20681;20682;20683;20684;20685;20686;20687;20688;20689;20690 22483;22484;22485;22486;22487;22488;22489;22490;22491;22492;22493 22488 11 QAVDVSPLR Unmodified 983.53999 0.53999412 256 P46782;M0R0F0;M0R0R2;M0QZN2 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 1 1 1 1 1 1 45.679 47.195 2 0.0011696 11475 Miao_Sh-H9_proteinG_mass3_141226_01 117.3 90.51 17459 376.91 305.12 332.5 283.54 0 4295.2 0 867.06 0 6019.1 4979.4 0 2234 256 2190 20691;20692;20693;20694;20695;20696;20697;20698;20699 22494;22495;22496;22497 22497 4 QAVTNPNNTFYATK Unmodified 1567.7631 0.76307078 441 P38646;D6RJI2;D6RA73 HSPA9 Stress-70 protein, mitochondrial yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 2 3 3 1 2 2 2 2 46.018 48.055 2;3 6.6387E-106 11320 Miao_Sh-H9_proteinG_mass3_141226_02 224.52 191.42 336550 977.43 843.09 0 7477.9 9063.2 58417 267.32 306.02 3183.1 96021 72894 87099 2235 441 2191 20700;20701;20702;20703;20704;20705;20706;20707;20708;20709;20710;20711;20712;20713;20714;20715;20716;20717;20718;20719;20720;20721 22498;22499;22500;22501;22502;22503;22504;22505;22506;22507;22508;22509;22510;22511;22512;22513;22514;22515;22516;22517;22518;22519;22520;22521;22522;22523;22524;22525;22526;22527;22528;22529 22522 32 QCANLQAAIADAEQR Unmodified 1657.7842 0.78421693 98 P02538;CON__P02538;CON__P04259 KRT6A Keratin, type II cytoskeletal 6A no no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 68.131 70.152 3 0.0016274 17927 Miao_Sh-c_proteinG_mass3_141226_03 60.657 40.454 1662.9 0 171.34 0 0 0 985.92 0 0 505.6 0 0 0 + 2236 98 2192 20722;20723;20724 22530 22530 1 QCDFTEDQTAEFK Unmodified 1617.6617 0.66170175 198 J3KND3;G8JLA2 PDE6H yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 2 4 1 2 2 1 1 5 2 1 75.017 70.601 2;3 6.0702E-12 20875 Miao_Sh-c_proteinG_mass3_141226_03 145.43 138.74 35801 5141.2 0 0 2741.9 0 8768 0 1444.3 2401.1 11464 3269.5 570.87 2237 198 2193 20725;20726;20727;20728;20729;20730;20731;20732;20733;20734;20735;20736;20737;20738;20739;20740;20741;20742;20743;20744;20745 22531;22532;22533;22534;22535;22536;22537;22538;22539;22540;22541;22542;22543;22544;22545;22546;22547;22548;22549;22550 22539 20 QDFVQHFSQIVR Unmodified 1502.763 0.7630112 367 P14324;P14324-2 FDPS Farnesyl pyrophosphate synthase yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 2 2 1 1 2 1 1 1 1 73.101 70.048 3 0.0047666 11950 Miao_Sh-c_Flag_mass3_141226_01 61.11 46.875 24498 3704.9 4449.8 5527.5 561.14 0 0 5524.9 2697.6 0 800.47 976.24 255.55 2238 367 2194 20746;20747;20748;20749;20750;20751;20752;20753;20754;20755;20756;20757 22551;22552;22553 22551 3 QDGQFSVLFTK Unmodified 1268.6401 0.6401021 103 CON__P12763 yes yes 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 2 1 1 1 1 1 1 71.042 72.379 2 4.7319E-06 12589 Miao_Sh-c_Flag_mass3_141226_01 132.5 90.626 21246 4839.6 0 0 883.09 0 3532.5 0 4893.9 0 4386.8 0 2710.4 + 2239 103 2195 20758;20759;20760;20761;20762;20763;20764;20765;20766 22554;22555;22556;22557;22558;22559;22560;22561;22562;22563 22554 9 QDVDNASLAR Unmodified 1087.5258 0.52580062 346 P08670;B0YJC4;B0YJC5;Q5JVS8 VIM Vimentin yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 1 33.971 34.982 2 0.0031073 3607 Miao_Sh-c_Flag_mass3_141226_01 93.096 47.416 1000.9 228.87 0 150.64 191.56 0 54.883 211.36 163.6 0 0 0 0 2240 346 2196 20767;20768;20769;20770;20771;20772 22564 22564 1 QEAIDWLLGLAVR Unmodified 1482.8195 0.81946344 670 Q9Y224;G3V4C6;H0YJB9 C14orf166 UPF0568 protein C14orf166 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 2 2 1 2 3 2 112.14 111.45 2;3 1.3207E-05 28345 Miao_Sh-H9_Flag_mass3_141226_03 114.02 72.329 28932 0 1909.2 5724.4 6279.8 0 0 1757.4 6821.6 3936.1 2503.6 0 0 2241 670 2197 20773;20774;20775;20776;20777;20778;20779;20780;20781;20782;20783;20784;20785 22565;22566;22567;22568;22569;22570;22571;22572;22573;22574;22575;22576;22577;22578;22579;22580;22581 22579 17 QEEEARR Unmodified 916.43626 0.43625733 481 P55036;Q5VWC4;P55036-2;H0Y3Y9;Q9NQS7;Q9NQS7-2 PSMD4;INCENP 26S proteasome non-ATPase regulatory subunit 4;Inner centromere protein yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 124.92 114.14 1 0.057535 29685 Miao_Sh-H9_Flag_mass3_141226_03 38.836 8.1676 1414.5 0 0 0 0 0 23.485 0 0 1318.7 35.786 0 36.538 2242 481 2198 20786;20787;20788;20789 22582 22582 0 QEEELMQLQAKMALR 2 Oxidation (M);GlyGly (K) 1962.9503 0.95029598 554 Q12923;Q12923-3;Q12923-2;Q12923-4 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 yes no 0 1 2 0 1 By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 72.455 72.255 2 0.022392 13985 Miao_Sh-H9_Flag_mass3_141226_01 46.318 24 0 0 0 0 0 0 0 0 0 0 0 0 0 2243 554 2199 20790;20791 22583;22584 22583 69;70 2 QEIAEINR Unmodified 971.50361 0.50360861 98 P02538;CON__P02538;P48668;CON__P04259;CON__P48668 KRT6A;KRT6C Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 38.193 39.045 2 0.023757 8520 Miao_Sh-H9_proteinG_mass3_141226_01 72.042 13.126 0 0 0 0 0 0 0 0 0 0 0 0 0 + 2244 98 2200 20792 22585 22585 1 QEIECQNQEYSLLLSIK Unmodified 2094.0303 0.030320436 432 P35527;CON__P35527;K7EQQ3 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 2 1 3 1 1 4 25 8 93.913 88.68 2;3 4.2676E-245 33266 Miao_Sh-H9_proteinG_mass3_141226_02 264 222.42 95320 1123.1 1605.5 0 32242 9455.1 13905 0 0 0 13421 0 23568 + 2245 432 2201 20793;20794;20795;20796;20797;20798;20799;20800;20801;20802;20803;20804;20805;20806;20807;20808;20809;20810;20811;20812;20813;20814;20815;20816;20817;20818;20819;20820;20821;20822;20823;20824;20825;20826;20827;20828;20829;20830;20831;20832;20833;20834;20835;20836;20837 22586;22587;22588;22589;22590;22591;22592;22593;22594;22595;22596;22597;22598;22599;22600;22601;22602;22603;22604;22605;22606;22607;22608;22609;22610;22611;22612;22613;22614;22615;22616;22617;22618;22619;22620;22621;22622;22623;22624;22625;22626;22627;22628;22629;22630;22631;22632;22633;22634;22635;22636;22637;22638;22639;22640;22641;22642;22643 22612 58 QEQINTEPLEDTVLSPTK Unmodified 2041.0215 0.021529888 276 O15446;O15446-2 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 82.209 73.638 3 0.019838 21026 Miao_Sh-H9_proteinG_mass3_141226_01 37.687 29.773 3658.1 0 0 0 0 0 0 0 0 0 1639.4 0 2018.8 2246 276 2202 20838;20839 22644 22644 1 QETGLRLCEKVFDPQNDK GlyGly (K) 2290.1012 0.10119397 274 O15145 ARPC3 Actin-related protein 2/3 complex subunit 3 yes yes 0 1 0 0 2 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 49.898 50.399 4 0.022335 7304 Miao_Sh-H9_Flag_mass3_141226_03 48.899 16.746 209460 0 0 0 0 0 0 0 0 209120 340.73 0 0 2247 274 2203 20840;20841 22645 22645 1 QEVAVFVFDK Unmodified 1180.6128 0.61282471 599 Q6P3W7;F8VSC5 SCYL2 SCY1-like protein 2 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 74.148 74.415 2 0.016734 14675 Miao_Sh-H9_Flag_mass3_141226_01 67.08 40.108 0 0 0 0 0 0 0 0 0 0 0 0 0 2248 599 2204 20842;20843;20844 22646;22647;22648 22647 3 QEYDESGPSIVHR Unmodified 1515.6954 0.69538514 524 P63261;P60709;Q6S8J3;A5A3E0;P0CG38;P0CG39;Q9BYX7 ACTG1;ACTB;POTEE;POTEF;POTEI;POTEJ;POTEKP Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Putative beta-actin-like protein 3 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 1 1 6 2 4 8 4 5 5 51.616 51.561 2;3 7.9701E-178 9385 Miao_Sh-H9_proteinG_mass3_141226_03 244.26 166.58 294340 5803.2 3336.6 4698.3 3214.9 2786.7 61769 18442 15797 11945 68269 50360 47923 2249 524 2205 20845;20846;20847;20848;20849;20850;20851;20852;20853;20854;20855;20856;20857;20858;20859;20860;20861;20862;20863;20864;20865;20866;20867;20868;20869;20870;20871;20872;20873;20874;20875;20876;20877;20878;20879;20880;20881;20882;20883;20884;20885;20886;20887 22649;22650;22651;22652;22653;22654;22655;22656;22657;22658;22659;22660;22661;22662;22663;22664;22665;22666;22667;22668;22669;22670;22671;22672;22673;22674;22675;22676;22677;22678;22679;22680;22681;22682;22683;22684;22685;22686;22687;22688;22689;22690;22691;22692;22693;22694;22695;22696;22697;22698;22699;22700;22701;22702;22703;22704;22705;22706;22707;22708;22709;22710;22711;22712;22713;22714;22715;22716;22717;22718 22718 69 QEYDESGPSIVHRK Unmodified 1643.7903 0.79034816 524 P63261;P60709;Q6S8J3;A5A3E0;P0CG38;P0CG39;Q9BYX7 ACTG1;ACTB;POTEE;POTEF;POTEI;POTEJ;POTEKP Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Putative beta-actin-like protein 3 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 1 35.018 36.722 4 0.00038243 8006 Miao_Sh-H9_proteinG_mass3_141226_01 70.373 63.686 3397.9 0 0 504.62 0 75.84 1199.4 36.516 57.582 0 1524 0 0 2250 524 2206 20888;20889;20890;20891;20892;20893 22719;22720;22721;22722 22722 4 QEYEQLIAK Unmodified 1120.5764 0.57643921 432 P35527;CON__P35527;K7EQQ3 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 2 1 3 2 2 2 2 50.024 52.052 2 2.2848E-147 11555 Miao_Sh-c_proteinG_mass3_141226_03 235.66 151.66 110810 500.95 800.27 0 1841.5 1253 24680 1018.3 0 0 33201 22346 25166 + 2251 432 2207 20894;20895;20896;20897;20898;20899;20900;20901;20902;20903;20904;20905;20906;20907;20908;20909;20910 22723;22724;22725;22726;22727;22728;22729;22730;22731;22732;22733;22734 22726 12 QFASQANVVGPWIQTK Unmodified 1772.921 0.9209684 283 O43707;O43707-2;F5GXS2;O43707-3;H7C144 ACTN4 Alpha-actinin-4 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 1 2 1 80.807 76.753 2;3 0.00068057 26355 Miao_Sh-H9_proteinG_mass3_141226_01 68.329 54.583 14441 3048.6 1461.8 0 2214.9 0 0 0 2923.5 920.47 3338.9 532.6 0 2252 283 2208 20911;20912;20913;20914;20915;20916;20917;20918;20919 22735;22736;22737;22738 22736 4 QFSQYIK Unmodified 912.47052 0.47051757 457 P46777 RPL5 60S ribosomal protein L5 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 48.029 49.984 2 0.024503 11536 Miao_Sh-H9_proteinG_mass3_141226_03 89.296 46.229 8274.7 0 0 0 0 0 0 0 0 0 5502.9 0 2771.8 2253 457 2209 20920;20921 22739 22739 1 QFYINVER Unmodified 1067.54 0.53999412 488 P60842;J3QL43;J3KT12;P60842-2;Q14240;J3KTB5;J3QS69;E7EQG2;Q14240-2;Q9NZE6;J3KTN0;J3KSZ0 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 1 59.034 60.498 2 0.0037274 9798 Miao_Sh-H9_Flag_mass3_141226_03 96.311 59.916 21878 0 795.69 3179.7 0 515.52 0 0 6889.1 0 0 10498 0 2254 488 2210 20922;20923;20924;20925;20926;20927;20928 22740;22741;22742 22741 3 QGAPTSFLPPEASQLKPDR Unmodified 2038.0484 0.048353761 643 Q9BUJ2;Q9BUJ2-2;B7Z4B8;Q9BUJ2-4;Q9BUJ2-3;M0QYZ0;M0QYI8;M0R0K8;M0R203;M0QZV6 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes no 0 0 0 0 1 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 2 2 1 5 1 1 67.149 68.214 3 1.2891E-37 19750 Miao_Sh-H9_proteinG_mass3_141226_01 152.01 118.65 84517 0 0 0 22162 16832 24086 539.07 927.97 0 0 162.83 19807 2255 643 2211 20929;20930;20931;20932;20933;20934;20935;20936;20937;20938;20939;20940;20941;20942 22743;22744;22745;22746;22747;22748;22749;22750;22751;22752;22753;22754;22755;22756;22757;22758;22759;22760 22753 18 QGEAEFNR Unmodified 949.42536 0.42535829 283 O43707;O43707-2;F5GXS2;O43707-3 ACTN4 Alpha-actinin-4 yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 1 30.761 31.806 2 0.0023903 3033 Miao_Sh-c_Flag_mass3_141226_02 115.71 85.971 2424.9 0 357.23 423.83 351.5 989.33 0 16.954 0 0 286.03 0 0 2256 283 2212 20943;20944;20945;20946;20947;20948 22761;22762;22763;22764 22761 4 QGGGGGGGSVPGIER Unmodified 1283.6218 0.62182627 471 P52272;P52272-2;M0R019;M0R2T0 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 36.864 39.42 2 0.046857 8123 Miao_Sh-H9_proteinG_mass3_141226_03 40.493 28.225 0 0 0 0 0 0 0 0 0 0 0 0 0 2257 471 2213 20949 22765 22765 1 QGLNGVPILSEEELSLLDEFYK Unmodified 2492.2686 0.26863645 189 Q14444;G3V153;Q14444-2 CAPRIN1 Caprin-1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 114.38 114.03 3 0.023058 28155 Miao_Sh-H9_Flag_mass3_141226_01 34.19 27.059 0 0 0 0 0 0 0 0 0 0 0 0 0 2258 189 2214 20950 22766 22766 1 QGVDADINGLR Unmodified 1156.5836 0.58364985 432 P35527;CON__P35527;K7EQQ3 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 50.178 52.699 2 3.2143E-127 12489 Miao_Sh-H9_proteinG_mass3_141226_03 239.55 161.23 180710 0 0 0 2352.2 1876.6 39009 0 0 369.01 65112 33856 38135 + 2259 432 2215 20951;20952;20953;20954;20955;20956;20957 22767;22768;22769;22770;22771;22772;22773;22774;22775;22776;22777 22776 11 QHCCPAGYTCNVK Unmodified 1593.6487 0.64865142 420 P28799;K7EQI0;K7EKL3;K7EQ05;P28799-3 GRN Granulins;Acrogranin;Paragranulin;Granulin-1;Granulin-2;Granulin-3;Granulin-4;Granulin-5;Granulin-6;Granulin-7 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 32.446 34.391 3 0.00021963 6889 Miao_Sh-H9_proteinG_mass3_141226_01 81.565 73.81 5415.5 0 0 0 0 0 1490 0 0 52.711 1830.2 1084.7 957.9 2260 420 2216 20958;20959;20960;20961;20962 22778;22779;22780 22778 3 QIATLHAQVADMK Unmodified 1424.7446 0.74458394 433 P35579 MYH9 Myosin-9 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 50.045 50.271 3 0.048802 12328 Miao_Sh-H9_proteinG_mass3_141226_01 36.944 19.471 6560.1 0 543.9 0 0 0 0 1253.3 0 1882.8 2880.1 0 0 2261 433 2217 20963;20964;20965;20966 22781 22781 1 QIFLGGVDK Unmodified 975.53893 0.53893149 322;361 P12236;I7HJJ0;P05141 SLC25A6;SLC25A5 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed no no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 1 1 58.299 57.499 2 0.028071 13178 Miao_Sh-c_proteinG_mass3_141226_03 66.758 5.1757 11878 0 0 0 0 991.37 2615.6 0 0 0 2629.3 4151.4 1490 2262 361;322 2218 20967;20968;20969;20970;20971 22782 22782 1 QIFNGTFVK Unmodified 1052.5655 0.56548059 388 P18124;A8MUD9;C9JZ88;C9JIJ5 RPL7 60S ribosomal protein L7 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 2 2 1 2 2 1 1 1 60.218 61.717 2 0.0043744 9747 Miao_Sh-c_proteinG_mass3_141226_02 88.392 12.258 43818 756.07 2022.8 0 6486.4 0 17065 2668.9 2322.2 0 7891.9 1328.6 3275.6 2263 388 2219 20972;20973;20974;20975;20976;20977;20978;20979;20980;20981;20982;20983;20984;20985;20986 22783;22784;22785;22786;22787;22788;22789;22790;22791 22783 9 QIGNVAALPGIVHR Unmodified 1443.831 0.83103118 680 Q9Y3I0;E7EQS9 RTCB tRNA-splicing ligase RtcB homolog yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 1 1 1 1 64.553 63.72 3 1.7166E-06 17790 Miao_Sh-H9_proteinG_mass3_141226_01 118.61 100.27 20119 1114.9 0 0 2446.1 2325.7 90.676 2326.9 3293.3 0 3794.6 4727 0 2264 680 2220 20987;20988;20989;20990;20991;20992;20993;20994 22792;22793;22794;22795;22796;22797;22798 22798 7 QIGVEHVVVYVNK Unmodified 1482.8195 0.81946344 465 P49411 TUFM Elongation factor Tu, mitochondrial yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 1 55.93 57.142 3 0.017789 8191 Miao_Sh-H9_Flag_mass3_141226_01 47.712 29.04 12795 0 977.66 0 994.09 0 0 2134.6 0 0 2300 1371.1 5017.4 2265 465 2221 20995;20996;20997;20998;20999;21000 22799 22799 1 QINWTVLYR Unmodified 1191.64 0.64004252 81 P83731;C9JXB8;C9JNW5 RPL24 60S ribosomal protein L24 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching 1 2 2 2 2 2 2 2 85.201 82.479 2 1.5422E-08 16970 Miao_Sh-H9_Flag_mass3_141226_03 133.13 84.711 30582 4974.4 5535 0 8217.5 5747.3 1845.2 0 0 0 4262.4 0 0 2266 81 2222 21001;21002;21003;21004;21005;21006;21007;21008;21009;21010;21011;21012;21013;21014;21015 22800;22801;22802;22803;22804;22805;22806;22807;22808;22809 22806 10 QISDGER Unmodified 803.37735 0.37734547 306 O95816;B4DXE2 BAG2 BAG family molecular chaperone regulator 2 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 25.864 26.044 2 0.0019803 2518 Miao_Sh-c_Flag_mass3_141226_03 129.47 14.683 6347.7 402.41 1334.9 1328.5 0 0 0 568.74 2713.2 0 0 0 0 2267 306 2223 21016;21017;21018;21019;21020 22810;22811;22812;22813;22814;22815 22813 6 QISDGEREELNLTANR Unmodified 1843.9024 0.90241781 306 O95816;B4DXE2 BAG2 BAG family molecular chaperone regulator 2 yes no 0 0 0 0 1 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 2 1 1 1 2 1 1 2 51.132 52.145 3 3.8837E-22 7360 Miao_Sh-H9_Flag_mass3_141226_02 150.76 119.69 24816 1074.9 991.43 0 0 0 1844.2 8156.4 4020 3673.5 1763.3 3292.4 0 2268 306 2224 21021;21022;21023;21024;21025;21026;21027;21028;21029;21030;21031 22816;22817;22818;22819 22819 4 QISNLQQSISDAEQR Unmodified 1715.8438 0.84384029 314 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 1 2 3 2 3 1 2 1 2 2 4 60.868 62.024 2;3 1.2595E-253 17238 Miao_Sh-H9_proteinG_mass3_141226_01 276.99 227.37 354610 0 3287 3075.4 35760 18101 64317 202.1 9812.8 5642.5 88802 64812 60798 + 2269 314 2225 21032;21033;21034;21035;21036;21037;21038;21039;21040;21041;21042;21043;21044;21045;21046;21047;21048;21049;21050;21051;21052;21053;21054;21055;21056;21057 22820;22821;22822;22823;22824;22825;22826;22827;22828;22829;22830;22831;22832;22833;22834;22835;22836;22837;22838;22839;22840;22841;22842;22843;22844;22845;22846;22847;22848;22849;22850;22851;22852;22853;22854;22855;22856;22857;22858;22859;22860;22861;22862;22863;22864;22865;22866;22867;22868;22869;22870;22871;22872;22873;22874;22875;22876;22877;22878;22879;22880;22881 22855 62 QISNLQQSISDAEQRGENALK Unmodified 2328.167 0.16696535 314 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 1 1 2 1 1 2 99.494 91.047 3 2.5665E-13 31840 Miao_Sh-H9_proteinG_mass3_141226_01 100.5 81.563 11450 1259.7 0 843.86 0 0 2627.7 0 0 0 4141.9 1327.8 1249.2 + 2270 314 2226 21058;21059;21060;21061;21062;21063;21064;21065 22882;22883;22884;22885 22884 4 QITVNDLPVGR Unmodified 1210.667 0.66698555 545 Q06830;P32119 PRDX1;PRDX2 Peroxiredoxin-1;Peroxiredoxin-2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 57.386 60.243 2 0.00042766 15415 Miao_Sh-H9_proteinG_mass3_141226_03 115.65 86.477 0 0 0 0 0 0 0 0 0 0 0 0 0 2271 545 2227 21066 22886 22886 1 QIVWNGPVGVFEWEAFAR Unmodified 2104.053 0.053045209 63 P00558;B7Z7A9;E7ERH5 PGK1 Phosphoglycerate kinase 1 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 3 1 3 2 2 2 1 112.08 112.33 2;3 5.1789E-07 25346 Miao_Sh-c_Flag_mass3_141226_03 77.478 65.895 18873 0 444.86 4309 486.62 0 0 3273.9 5311.1 5047.7 0 0 0 2272 63 2228 21067;21068;21069;21070;21071;21072;21073;21074;21075;21076;21077;21078;21079;21080 22887;22888;22889;22890;22891;22892;22893;22894;22895;22896;22897;22898;22899 22890 13 QKQLQQQNEKEMMEQIR 2 Oxidation (M);2 GlyGly (K) 2448.1486 0.14855487 19 B2RTY4;B2RTY4-4;H3BMM1;H3BV44;H3BRD5;B2RTY4-5;B2RTY4-2 MYO9A Unconventional myosin-IXa yes no 0 2 2 0 2 By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 2 1 1 1 1 1 2 1 80.504 76.818 4 2.5682E-06 14320 Miao_Sh-c_proteinG_mass3_141226_01 74.789 45.697 37721 0 0 7622.4 14441 1078 0 1383.3 1299.8 1856.8 593.11 1763.3 7683 2273 19 2229 21081;21082;21083;21084;21085;21086;21087;21088;21089;21090;21091 22900;22901;22902;22903;22904;22905 22904 0;1 2;3 6 QKVDSLLENLEK Unmodified 1414.7668 0.76675917 50 P07910;P07910-2;G3V576;G3V4W0;B4DY08;G3V4C1;G3V2Q1;P07910-4;O60812;P07910-3;G3V5V7;G3V2D6 HNRNPC;HNRNPCL1 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 1 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 66.185 66.535 3 0.040838 18865 Miao_Sh-H9_proteinG_mass3_141226_01 43.798 6.2897 0 0 0 0 0 0 0 0 0 0 0 0 0 2274 50 2230 21092 22906 22906 1 QLAELREKSQEWMDK Oxidation (M);2 GlyGly (K) 2134.0113 0.011316328 605 Q86UK0;Q86UK0-2 ABCA12 ATP-binding cassette sub-family A member 12 yes no 0 2 1 0 2 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 2 1 1 1 1 54.014 55.041 2;3 0.010308 13821 Miao_Sh-H9_proteinG_mass3_141226_03 55.724 33.289 330720 69226 0 0 0 805.83 0 371.8 236530 0 0 0 23780 2275 605 2231 21093;21094;21095;21096;21097;21098 22907;22908;22909;22910;22911;22912;22913;22914;22915;22916 22915 78 10 QLANMVNNLK Unmodified 1143.607 0.60702783 167 P19474;F5H012;P19474-2 TRIM21 E3 ubiquitin-protein ligase TRIM21 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 56.441 56.692 2 0.042958 8617 Miao_Sh-H9_Flag_mass3_141226_03 52.579 17.037 0 0 0 0 0 0 0 0 0 0 0 0 0 2276 167 2232 21099 22917 22917 1 QLASGLLLVTGPLVLNR Unmodified 1763.0669 0.066904359 542 Q02878 RPL6 60S ribosomal protein L6 yes yes 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 1 1 4 2 2 1 3 4 4 105.47 101.31 2;3 3.0367E-35 37616 Miao_Sh-H9_proteinG_mass3_141226_02 166.83 136.53 83218 3766 10371 4365 7330.7 6980.8 0 483.39 9815.5 6490.3 9656.3 6918 17041 2277 542 2233 21100;21101;21102;21103;21104;21105;21106;21107;21108;21109;21110;21111;21112;21113;21114;21115;21116;21117;21118;21119;21120;21121;21122;21123;21124;21125;21126;21127 22918;22919;22920;22921;22922;22923;22924;22925;22926;22927;22928;22929;22930;22931;22932;22933;22934;22935;22936;22937;22938;22939;22940;22941;22942;22943;22944;22945;22946;22947;22948;22949;22950;22951;22952;22953 22943 35 QLDSIVGER Unmodified 1015.5298 0.52982336 98;105 P02538;CON__P02538;P48668;CON__P04259;CON__P48668;F8W0C6;P13647;CON__P13647 KRT6A;KRT6C;KRT5 Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 5 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 1 2 1 1 1 1 48.843 50.206 2 5.815E-05 10258 Miao_Sh-c_proteinG_mass3_141226_03 114.86 32.108 12067 0 755.96 0 0 0 0 493.06 0 0 5882.5 1155.8 3779.3 + 2278 98;105 2234 21128;21129;21130;21131;21132;21133;21134 22954;22955;22956 22954 3 QLEAIDQLHLEYAK Unmodified 1669.8675 0.86753585 283 O43707;O43707-2;F5GXS2;O43707-3 ACTN4 Alpha-actinin-4 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS 1 1 2 1 2 70.173 70.423 3 0.0034254 13269 Miao_Sh-H9_Flag_mass3_141226_01 60.55 39.608 6667.1 3849.6 0 1717.8 0 0 0 582.85 0 0 516.84 0 0 2279 283 2235 21135;21136;21137;21138;21139;21140;21141 22957;22958;22959;22960 22958 4 QLEDELVSLQK Unmodified 1300.6874 0.68744622 212 P09493;P09493-3;H0YL52;P09493-9;P09493-4;P09493-10;H0YKP3;H0YKZ6 TPM1 Tropomyosin alpha-1 chain yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 65.78 64.868 2 0.05022 19009 Miao_Sh-H9_proteinG_mass3_141226_01 51.286 30.701 4711.3 1384.4 0 0 725.86 0 0 0 0 0 1800.6 456.51 343.96 2280 212 2236 21142;21143;21144;21145;21146 22961 22961 1 QLEEAEEEAQR Unmodified 1330.6001 0.60008777 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 2 1 1 2 1 2 3 2 35.309 37.254 2;3 9.62E-22 7932 Miao_Sh-H9_proteinG_mass3_141226_01 162.23 135.57 25254 26 81.901 322.45 159.03 140.4 5096.6 0 0 38.469 7890.9 6350.8 5147 2281 433 2237 21147;21148;21149;21150;21151;21152;21153;21154;21155;21156;21157;21158;21159;21160;21161;21162 22962;22963;22964;22965;22966;22967;22968;22969 22965 8 QLEEAEEEATR Unmodified 1303.5892 0.58918874 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 37.791 40.565 2 0.014374 7398 Miao_Sh-c_proteinG_mass3_141226_03 64.64 24.855 1169 0 0 77.073 99.147 0 992.82 0 0 0 0 0 0 2282 434 2238 21163;21164;21165 22970 22970 1 QLETVLDDLDPENALLPAGFR Unmodified 2325.1852 0.18524117 657 Q9NYL9 TMOD3 Tropomodulin-3 yes yes 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 108.07 109 3 1.4374E-08 27494 Miao_Sh-c_proteinG_mass3_141226_01 72.585 61.97 0 0 0 0 0 0 0 0 0 0 0 0 0 2283 657 2239 21166;21167;21168 22971;22972;22973 22972 3 QLFHPEQLITGK Unmodified 1409.7667 0.76669959 529 P68363 TUBA1B Tubulin alpha-1B chain no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 8 2 2 2 3 2 1 5 11 3 5 74.617 72.969 2;3 1.2441E-73 12529 Miao_Sh-H9_Flag_mass3_141226_03 194.86 133.75 266110 16060 13852 15000 40554 13164 17816 27353 23466 24394 46031 16734 11685 2284 529 2240 21169;21170;21171;21172;21173;21174;21175;21176;21177;21178;21179;21180;21181;21182;21183;21184;21185;21186;21187;21188;21189;21190;21191;21192;21193;21194;21195;21196;21197;21198;21199;21200;21201;21202;21203;21204;21205;21206;21207;21208;21209;21210;21211;21212;21213;21214;21215;21216;21217;21218;21219 22974;22975;22976;22977;22978;22979;22980;22981;22982;22983;22984;22985;22986;22987;22988;22989;22990;22991;22992;22993;22994;22995;22996;22997;22998;22999;23000;23001;23002;23003;23004;23005;23006;23007;23008;23009;23010;23011;23012;23013;23014;23015;23016;23017;23018;23019;23020;23021;23022;23023;23024;23025;23026;23027;23028;23029;23030;23031;23032;23033;23034;23035;23036;23037;23038;23039;23040;23041;23042;23043;23044;23045;23046;23047;23048;23049;23050;23051 23023 78 QLFSSLFSGILK Unmodified 1338.7547 0.75473792 533 P78527;E7EUY0;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 106.68 106.16 2 0.012751 26295 Miao_Sh-H9_Flag_mass3_141226_02 59.227 45.827 0 0 0 0 0 0 0 0 0 0 0 0 0 2285 533 2241 21220;21221 23052;23053 23053 2 QLIVGVNK Unmodified 869.53345 0.53345218 527 P68104;Q5VTE0;Q05639 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 2 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 2 1 2 43.065 44.919 2 0.023365 9207 Miao_Sh-c_proteinG_mass3_141226_03 78.324 25.161 44687 1275.1 1395.2 0 0 609.87 7748.2 1250.4 0 1364.7 11053 8087.6 11902 2286 527 2242 21222;21223;21224;21225;21226;21227;21228;21229;21230;21231;21232 23054;23055;23056;23057;23058 23055 5 QLLEEMLTSYR Unmodified 1381.6912 0.69115139 296 O75688;O75688-3 PPM1B Protein phosphatase 1B yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 86.317 86.667 2 0.001511 18884 Miao_Sh-H9_Flag_mass3_141226_01 110.08 73.653 4626.6 0 0 0 685.18 0 0 3941.4 0 0 0 0 0 2287 296 2243 21233;21234;21235 23059;23060 23060 2 QLLGLQPISTVSPLHR Unmodified 1758.0152 0.015203139 664 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 81.419 78.077 3 2.2276E-22 15525 Miao_Sh-c_proteinG_mass3_141226_01 108.66 88.764 18545 429.84 0 0 5059.5 4637.4 5139.8 0 0 0 156.31 3121.9 0 2288 664 2244 21236;21237;21238;21239;21240;21241 23061;23062;23063;23064 23061 3 QLLLTADDR Unmodified 1043.5611 0.56112349 219 P04075;H3BUH7;H3BPS8;H3BQN4;J3KPS3;P04075-2;H3BMQ8;H3BR04;H3BU78 ALDOA Fructose-bisphosphate aldolase A yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 53.403 53.865 2 0.039604 13532 Miao_Sh-H9_proteinG_mass3_141226_01 61.765 39.528 6413.6 668.1 0 0 705.82 0 0 988.42 0 779.06 3272.2 0 0 2289 219 2245 21242;21243;21244;21245;21246 23065 23065 1 QLLQANPILEAFGNAK Unmodified 1725.9414 0.94136949 433;158 P35579;P35579-2;Q7Z406;F2Z2U8;G8JLL9;Q7Z406-6;Q7Z406-2;Q7Z406-5;Q7Z406-4;M0QY43 MYH9;MYH14 Myosin-9;Myosin-14 no no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 1 2 6 3 2 3 3 4 105.77 99.978 2;3 3.5259E-111 36817 Miao_Sh-H9_proteinG_mass3_141226_01 220.52 151.49 379890 0 5443.1 12972 59781 14655 44709 7303.5 30340 0 77381 73718 53587 2290 433;158 2246 21247;21248;21249;21250;21251;21252;21253;21254;21255;21256;21257;21258;21259;21260;21261;21262;21263;21264;21265;21266;21267;21268;21269;21270;21271;21272;21273;21274;21275;21276;21277 23066;23067;23068;23069;23070;23071;23072;23073;23074;23075;23076;23077;23078;23079;23080;23081;23082;23083;23084;23085;23086;23087;23088;23089;23090;23091;23092;23093;23094;23095;23096;23097;23098;23099;23100;23101;23102;23103;23104;23105;23106;23107;23108;23109;23110;23111;23112;23113;23114;23115;23116;23117;23118;23119;23120;23121;23122;23123;23124;23125;23126;23127;23128;23129;23130;23131;23132;23133;23134;23135;23136;23137;23138;23139;23140;23141;23142;23143;23144;23145 23116 80 QLLQANPILESFGNAK Unmodified 1741.9363 0.93628412 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 1 1 3 2 1 95.531 91.717 2;3 1.8475E-10 34048 Miao_Sh-H9_proteinG_mass3_141226_02 117.48 93.059 29456 2241.8 1289.5 2002.1 0 4692.1 3347.7 0 2645.6 3050.6 4452.6 3488 2246.2 2291 434 2247 21278;21279;21280;21281;21282;21283;21284;21285;21286;21287;21288;21289;21290;21291;21292 23146;23147;23148;23149;23150;23151;23152;23153;23154;23155;23156;23157;23158 23157 13 QLNHFWEIVVQDGITLITK Unmodified 2253.2158 0.21575344 364 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 2 116.65 117.78 3 1.7413E-06 30795 Miao_Sh-H9_Flag_mass3_141226_03 73.057 63.135 7585.1 2926.7 0 1735.1 0 673.44 0 1733.4 0 516.47 0 0 0 2292 364 2248 21293;21294;21295;21296;21297;21298;21299 23159;23160;23161;23162 23162 3 QLQELEK Unmodified 886.476 0.47599688 167 P19474;F5H012 TRIM21 E3 ubiquitin-protein ligase TRIM21 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 36.576 36.137 2 0.003482 3460 Miao_Sh-H9_Flag_mass3_141226_02 126.28 11.557 1740.5 0 461.97 0 0 0 0 435.64 396.3 446.64 0 0 0 2293 167 2249 21300;21301;21302;21303 23163;23164 23164 2 QLQKDFAAMKK 2 GlyGly (K);QQTGG (K) 2006.0004 0.0003577111 628 Q92901 RPL3L 60S ribosomal protein L3-like yes yes 0 2 0 1 2 By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 97.487 92.675 3 0.0029098 18801 Miao_Sh-c_Flag_mass3_141226_01 66.267 45.828 11391 4106.7 0 0 0 0 1662.5 5622.1 0 0 0 0 0 2294 628 2250 21304;21305;21306 23165;23166 23165 4 2 QLQMKTQQQFTK Oxidation (M);GlyGly (K) 1637.8195 0.8195398 142 Q8IWZ3;Q8IWZ3-6;E9PDP5;Q8IWZ3-4 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes no 0 1 1 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 1 59.795 60.569 3 0.025789 16089 Miao_Sh-H9_proteinG_mass3_141226_02 51.612 8.5814 1254500 2535.6 1377.2 2140.5 1744.3 0 0 2962.1 0 0 801150 442550 0 2295 142 2251 21307;21308;21309;21310;21311;21312;21313 23167 23167 16 0 QMTEAIGPSTIR Unmodified 1302.6602 0.66018561 573 Q14764 MVP Major vault protein yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 51.908 53.462 2 0.010789 13619 Miao_Sh-H9_proteinG_mass3_141226_01 62.162 42.503 6995.6 883.76 124.85 1060 608.35 679.52 0 0 0 0 2530.1 0 1109 2296 573 2252 21314;21315;21316;21317;21318;21319;21320 23168;23169 23168 2 QMTEAIGPSTIR Oxidation (M) 1318.6551 0.65510023 573 Q14764 MVP Major vault protein yes yes 0 0 1 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 1 46.34 48.762 2 0.041147 11267 Miao_Sh-H9_proteinG_mass3_141226_01 45.28 17.852 7601.2 723.7 191.82 0 0 1379.5 1728.3 0 0 0 2515.4 1062.4 0 2297 573 2252 21321;21322;21323;21324;21325;21326 23170 23170 0 QNLEPLFEQYINNLR Unmodified 1889.9636 0.9635615 98;105 P02538;CON__P02538;P48668;CON__P04259;CON__P48668;F8W0C6;P13647;CON__P13647 KRT6A;KRT6C;KRT5 Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 5 no no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching 3 1 2 117.49 106.89 2;3 7.9525E-09 25654 Miao_Sh-c_proteinG_mass3_141226_02 111.07 96.893 10335 0 0 0 0 0 0 0 0 0 6107.9 4226.7 0 + 2298 98;105 2253 21327;21328;21329;21330;21331;21332 23171;23172;23173;23174;23175 23173 5 QNLEPLFEQYINNLRR Unmodified 2046.0647 0.064672527 98;105 P02538;CON__P02538;P48668;CON__P04259;CON__P48668;F8W0C6;P13647;CON__P13647 KRT6A;KRT6C;KRT5 Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 5 no no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 109.95 104.59 3 1.0771E-09 38157 Miao_Sh-H9_proteinG_mass3_141226_01 128.76 93.835 8922.6 0 0 0 610.21 0 0 0 0 0 8312.4 0 0 + 2299 98;105 2254 21333;21334 23176 23176 1 QNLFLGSLTSR Unmodified 1234.667 0.66698555 255 Q3ZCQ8;M0R0C3;M0R2F8;Q3ZCQ8-3;Q3ZCQ8-2 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 74.114 74.064 2 0.035032 14878 Miao_Sh-H9_Flag_mass3_141226_03 50.354 23.05 0 0 0 0 0 0 0 0 0 0 0 0 0 2300 255 2255 21335 23177 23177 1 QNQFYDTQVIK Unmodified 1382.683 0.68302954 643 Q9BUJ2;Q9BUJ2-2;B7Z4B8;Q9BUJ2-4;Q9BUJ2-3;M0QYZ0;M0R0K8;M0R203;M0QZV6 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 2 1 1 2 2 2 56.417 58.574 2;3 2.7863E-10 15482 Miao_Sh-H9_proteinG_mass3_141226_01 148.76 107.77 83309 0 938.11 612.92 5408.6 4404.3 19769 0 0 0 29723 2229.6 20224 2301 643 2256 21336;21337;21338;21339;21340;21341;21342;21343;21344;21345;21346;21347 23178;23179;23180;23181;23182;23183;23184;23185;23186;23187;23188 23184 10 QNRPIPQWIR Unmodified 1306.7258 0.72583783 517 P62891;Q59GN2 RPL39;RPL39P5 60S ribosomal protein L39;Putative 60S ribosomal protein L39-like 5 yes no 0 0 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 1 2 3 5 60.84 59.784 3 1.5081E-18 8563 Miao_Sh-H9_Flag_mass3_141226_02 162.88 130.66 160270 10097 7419.3 7746.4 23820 36038 5684.4 19570 19073 17465 12327 0 1033.2 2302 517 2257 21348;21349;21350;21351;21352;21353;21354;21355;21356;21357;21358;21359;21360;21361;21362;21363;21364;21365 23189;23190;23191;23192;23193;23194;23195;23196;23197;23198;23199;23200;23201;23202;23203;23204;23205;23206;23207;23208;23209;23210;23211;23212;23213;23214;23215;23216;23217;23218;23219;23220;23221;23222;23223;23224 23214 36 QPCQPPPVCPTPK Unmodified 1504.7167 0.71665463 396 P35325;P22532;P35326;P22531;Q9BYE4 SPRR2B;SPRR2D;SPRR2A;SPRR2E;SPRR2G Small proline-rich protein 2B;Small proline-rich protein 2D;Small proline-rich protein 2A;Small proline-rich protein 2E;Small proline-rich protein 2G yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 42.216 43.085 3 0.053426 8928 Miao_Sh-H9_proteinG_mass3_141226_01 35.657 24.338 923.51 0 123.04 158.2 0 0 0 0 0 0 642.27 0 0 2303 396 2258 21366;21367;21368 23225 23225 1 QPNEGSSSQEEEGPSTSPDAESLFR Unmodified 2664.1423 0.14232632 451 P43358;C9JZJ5;C9J9C2;C9JK50;C9JIR1 MAGEA4 Melanoma-associated antigen 4 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 2 63.3 64.424 3 9.2964E-27 11087 Miao_Sh-H9_Flag_mass3_141226_01 96.723 90.358 0 0 0 0 0 0 0 0 0 0 0 0 0 2304 451 2259 21369;21370;21371;21372;21373;21374;21375 23226;23227;23228;23229;23230;23231;23232 23228 7 QPTIFQNK Unmodified 974.51853 0.5185304 254 P62280;M0QZC5;M0R1H6 RPS11 40S ribosomal protein S11 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 2 1 1 1 2 2 42.174 43.828 2 0.00067398 9642 Miao_Sh-H9_proteinG_mass3_141226_03 127.46 71.957 34062 666.84 526.96 0 477.75 395.73 0 0 674.75 0 10125 8827.5 12368 2305 254 2260 21376;21377;21378;21379;21380;21381;21382;21383;21384;21385;21386 23233;23234;23235;23236;23237;23238 23237 6 QPYAVSELAGHQTSAESWGTGR Unmodified 2331.088 0.087986745 438 P36578;H3BTP7;H3BU31 RPL4 60S ribosomal protein L4 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 3 2 1 2 2 63.428 64.029 3 5.5653E-07 18052 Miao_Sh-H9_proteinG_mass3_141226_01 69.765 58.326 28307 0 3277.6 0 4824.2 0 0 3277.2 333.7 6066.1 6183.1 4345.1 0 2306 438 2261 21387;21388;21389;21390;21391;21392;21393;21394;21395;21396;21397;21398;21399;21400 23239;23240;23241;23242;23243;23244;23245;23246;23247;23248;23249;23250 23246 11 QQEPIQILLIFLQK Unmodified 1710.008 0.0079924964 599 Q6P3W7;F8VSC5;H0YIK6 SCYL2 SCY1-like protein 2 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 1 2 1 2 2 1 117.1 117.85 2;3 4.1698E-24 27562 Miao_Sh-c_Flag_mass3_141226_01 124.47 114.35 26236 5207.5 4135.3 621.54 0 307.9 0 4066.5 7654.3 4243.3 0 0 0 2307 599 2262 21401;21402;21403;21404;21405;21406;21407;21408;21409;21410;21411 23251;23252;23253;23254;23255;23256;23257;23258;23259;23260;23261;23262;23263 23252 12 QQIQSIQQSIER Unmodified 1456.7634 0.76340513 16 P55769;B1AHD1 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 2 2 1 2 51.536 54.248 2;3 0.00067256 14015 Miao_Sh-H9_proteinG_mass3_141226_01 110.31 56.55 14485 0 0 638.28 154.25 0 2880.2 0 0 0 5320.1 1408.2 4083.9 2308 16 2263 21412;21413;21414;21415;21416;21417;21418;21419;21420 23264;23265;23266;23267;23268 23264 5 QQLLIGAYAK Unmodified 1103.6339 0.63389451 638 Q99832;Q99832-3;F5GZK5;Q99832-4;Q99832-2;B7Z1C9 CCT7 T-complex protein 1 subunit eta yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 60.972 60.069 2 0.016483 9935 Miao_Sh-H9_Flag_mass3_141226_02 67.334 48.558 0 0 0 0 0 0 0 0 0 0 0 0 0 2309 638 2264 21421 23269 23269 1 QQLPEQPFEK Unmodified 1242.6245 0.62445203 455 P46087;P46087-2;P46087-4 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 51.246 51.998 2 0.0069987 11487 Miao_Sh-c_proteinG_mass3_141226_03 77.358 55.331 2222.1 0 0 0 0 0 0 0 0 0 2222.1 0 0 2310 455 2265 21422;21423 23270;23271 23270 2 QQLSAEELDAQLDAYNAR Unmodified 2033.9654 0.96541199 139 Q86V81;E9PB61 ALYREF THO complex subunit 4 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 2 3 3 2 1 1 1 3 4 78.429 75.462 2;3 3.453E-84 14969 Miao_Sh-c_proteinG_mass3_141226_01 202.93 159.38 107090 8599.9 7675.4 9444.1 15209 929.55 0 14240 867.98 10674 21835 12452 5166.7 2311 139 2266 21424;21425;21426;21427;21428;21429;21430;21431;21432;21433;21434;21435;21436;21437;21438;21439;21440;21441;21442;21443;21444;21445 23272;23273;23274;23275;23276;23277;23278;23279;23280;23281;23282;23283;23284;23285;23286;23287;23288;23289;23290;23291 23276 20 QQQEPTGEPSPK Unmodified 1324.6259 0.62590859 169 P52926;P52926-2;F5H2U8;F5H2A4;F5H6H0;P52926-3;P52926-6;P52926-4;P52926-5 HMGA2 High mobility group protein HMGI-C yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 28.965 29.416 2 0.057062 6068 Miao_Sh-H9_proteinG_mass3_141226_01 47.429 38.942 254.6 0 0 0 0 0 0 0 0 0 254.6 0 0 2312 169 2267 21446 23292 23292 1 QQQVDIPLR Unmodified 1095.6037 0.60365701 659 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 50.082 51.92 2 0.019424 13069 Miao_Sh-H9_proteinG_mass3_141226_02 70.908 39.487 8038.3 0 0 0 0 0 0 0 0 1007.4 0 4043.8 2987 2313 659 2268 21447;21448;21449 23293 23293 1 QQTQHAVEGDCDIHVLK Unmodified 1976.9374 0.9374231 103 CON__P12763 yes yes 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 1 1 43.809 44.454 4 0.045228 4679 Miao_Sh-c_Flag_mass3_141226_01 29.099 22.663 9342 936.03 739.91 0 326.5 0 0 0 2095.5 1613.8 2378.3 0 1252 + 2314 103 2269 21450;21451;21452;21453;21454;21455;21456 23294 23294 1 QQVPSGESAILDR Unmodified 1398.7103 0.71030693 349 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 1 50.235 53.456 2 0.0031784 12217 Miao_Sh-c_proteinG_mass3_141226_03 70.438 36.185 7909.9 0 0 0 551.29 0 2079.2 0 0 0 0 4008.6 1270.8 2315 349 2270 21457;21458;21459;21460 23295 23295 1 QRYEILTPNSIPK Unmodified 1557.8515 0.85149185 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 1 3 2 1 2 59.173 60.788 2;3 5.4034E-08 14869 Miao_Sh-c_proteinG_mass3_141226_03 133.04 92.312 118520 120.64 0 168.62 9859.9 0 34926 0 0 1152.5 36719 31015 4557.8 2316 433 2271 21461;21462;21463;21464;21465;21466;21467;21468;21469;21470;21471;21472;21473;21474;21475 23296;23297;23298;23299;23300;23301;23302;23303;23304;23305;23306;23307;23308;23309;23310 23299 15 QSFMPNLLDLFR Unmodified 1479.7544 0.75442035 686 yes yes 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 69.812 70.752 3 0.0025891 12491 Miao_Sh-c_Flag_mass3_141226_01 68.536 6.8569 28681 16152 0 10021 0 0 0 0 0 2270.2 0 237.98 0 + 2317 686 2272 21476;21477;21478;21479 23311 23311 1 QSGYGGQTKPIFR Unmodified 1437.7365 0.7364621 228 Q969Q0;P83881;J3KQN4;H7BZ11;H0Y5B4;H7BY91;H0Y3V9 RPL36AL;RPL36A;RPL36A-HNRNPH2 60S ribosomal protein L36a-like;60S ribosomal protein L36a yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 42.035 43.856 3 0.0048259 9672 Miao_Sh-H9_proteinG_mass3_141226_03 65.329 51.929 5665.8 186.72 0 179.52 0 0 2507.9 0 0 339.53 533.23 0 1918.8 2318 228 2273 21480;21481;21482;21483;21484;21485 23312 23312 1 QSKPVTTPEEIAQVATISANGDK Unmodified 2383.2231 0.22308324 354 P10809;E7ESH4;E7EXB4 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 1 65.675 68.143 3 0.00096628 18162 Miao_Sh-c_proteinG_mass3_141226_03 43.38 35.278 3436.5 124.1 714.45 0 0 1123.2 1474.8 0 0 0 0 0 0 2319 354 2274 21486;21487;21488;21489 23313 23313 1 QSLEASLAETEGR Unmodified 1389.6736 0.67358707 104 P13645;CON__P13645;CON__P02535-1 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 3 1 1 4 2 2 2 57.18 58.949 2;3 9.321E-133 14419 Miao_Sh-c_proteinG_mass3_141226_03 229.9 183.54 68082 0 0 0 1252.9 0 7530.2 0 1016.6 1173.1 21779 18098 17232 + 2320 104 2275 21490;21491;21492;21493;21494;21495;21496;21497;21498;21499;21500;21501;21502;21503;21504;21505 23314;23315;23316;23317;23318;23319;23320;23321;23322;23323;23324;23325;23326;23327;23328;23329;23330;23331 23317 18 QSVEADINGLRR Unmodified 1356.711 0.71097563 104 P13645;CON__P13645;CON__P02535-1 KRT10 Keratin, type I cytoskeletal 10 no no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 2 1 1 1 1 2 1 2 51.521 53.387 2;3 0.018438 12495 Miao_Sh-c_proteinG_mass3_141226_03 96.229 67.947 49044 0 3201.3 228.8 1401 1275.7 7861.6 3146 1199.9 751.4 14476 9575.9 5926.2 + 2321 104 2276 21506;21507;21508;21509;21510;21511;21512;21513;21514;21515;21516;21517;21518;21519 23332;23333;23334;23335;23336 23332 5 QTATQLLK Unmodified 901.52328 0.52328142 509 P62424;Q5T8U3 RPL7A 60S ribosomal protein L7a yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 2 1 1 38.269 41.494 2 0.0020195 9388 Miao_Sh-H9_proteinG_mass3_141226_01 104.01 45.232 10300 0 0 395.53 0 0 4959 0 0 0 0 4945.7 0 2322 509 2277 21520;21521;21522;21523;21524;21525;21526;21527 23337;23338;23339;23340;23341;23342 23342 6 QTGIVLNRPVLR Unmodified 1364.8252 0.82521752 155 Q13435;E9PPJ0;E9PJT3;E9PJ04;H0YCG1 SF3B2 Splicing factor 3B subunit 2 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 53.856 55.435 3 0.027909 14350 Miao_Sh-H9_proteinG_mass3_141226_01 53.237 38.558 2970.8 0 0 0 0 0 0 0 0 0 1358.8 1612 0 2323 155 2278 21528;21529 23343 23343 1 QTLENERGELANEVK Unmodified 1728.8642 0.86424139 433 P35579 MYH9 Myosin-9 yes yes 0 0 0 0 1 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 2 2 1 7 1 4 47.702 50.212 2;3 9.3672E-66 12454 Miao_Sh-H9_proteinG_mass3_141226_01 186.7 146.42 154010 1292.2 1390.8 1452.1 4878.7 2598.2 40685 2790.4 0 0 44280 20922 33723 2324 433 2279 21530;21531;21532;21533;21534;21535;21536;21537;21538;21539;21540;21541;21542;21543;21544;21545;21546;21547;21548;21549;21550 23344;23345;23346;23347;23348;23349;23350;23351;23352;23353;23354;23355;23356;23357;23358;23359;23360;23361;23362;23363;23364;23365 23351 22 QTQTFTTYSDNQPGVLIQVYEGER Unmodified 2773.3195 0.31950282 356 P11142;E9PKE3;P11142-2;E9PNE6;A8K7Q2;E9PS65 HSPA8 Heat shock cognate 71 kDa protein yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 1 1 1 4 2 2 1 1 84.653 85.722 3 1.7499E-49 17019 Miao_Sh-c_Flag_mass3_141226_01 140.55 130.8 23343 0 6057.3 8806.8 8479.2 0 0 0 0 0 0 0 0 2325 356 2280 21551;21552;21553;21554;21555;21556;21557;21558;21559;21560;21561;21562;21563;21564;21565;21566 23366;23367;23368;23369;23370;23371;23372;23373;23374;23375;23376;23377;23378;23379;23380;23381;23382;23383 23368 18 QTQVSVLPEGGETPLFK Unmodified 1828.9571 0.95707914 329 P06396;P06396-2;P06396-4;P06396-3;Q5T0H9;CON__Q3SX14 GSN Gelsolin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 77.66 77.61 2;3 0.0015502 20942 Miao_Sh-c_proteinG_mass3_141226_03 55.912 37.839 5467.9 0 999.77 0 0 0 0 2316.8 0 2151.3 0 0 0 + 2326 329 2281 21567;21568;21569;21570;21571 23384;23385;23386;23387 23384 4 QTVAVGVIK Unmodified 913.55967 0.55966693 527 P68104;Q5VTE0;Q05639 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 2 yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 2 1 1 1 1 1 46.123 46.418 2 0.0072638 4759 Miao_Sh-c_proteinG_mass3_141226_01 81.525 23.295 29328 2204.2 1776.4 1706.2 1316.4 0 0 2539.8 1949.1 1906.1 15930 0 0 2327 527 2282 21572;21573;21574;21575;21576;21577;21578;21579;21580;21581;21582 23388;23389;23390;23391;23392;23393;23394 23389 7 QTVEADVNGLRR Unmodified 1356.711 0.71097563 102 P08779;CON__P08779 KRT16 Keratin, type I cytoskeletal 16 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 44.921 45.873 3 0.036009 11126 Miao_Sh-H9_proteinG_mass3_141226_01 56.404 32.315 5408 0 0 0 0 0 0 0 0 0 5408 0 0 + 2328 102 2283 21583 23395 23395 0 QTYFLPVIGLVDAEK Unmodified 1691.9134 0.91342341 684 R4GNH3;P17980;E9PKD5;E9PM69;E9PMD8;E9PLG2 PSMC3 26S protease regulatory subunit 6A yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 104.44 104.77 2 9.3818E-05 22754 Miao_Sh-c_Flag_mass3_141226_02 106.38 90.027 13432 247.76 3988.4 0 746.13 0 0 0 3566.4 4883.2 0 0 0 2329 684 2284 21584;21585;21586;21587;21588 23396;23397;23398 23396 3 QTYSTEPNNLK Unmodified 1293.6201 0.62009493 210 P46779;H0YKD8;P46779-2;P46779-3;H0YMF4;P46779-4;P46779-5;H0YLP6 RPL28 60S ribosomal protein L28 yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 2 1 1 1 1 37.415 38.053 2 0.00037126 7162 Miao_Sh-c_proteinG_mass3_141226_03 116.74 62.25 13170 502.8 506.75 457.57 0 0 0 859.77 531.23 0 0 5392 4919.6 2330 210 2285 21589;21590;21591;21592;21593;21594;21595;21596;21597;21598 23399;23400;23401;23402;23403;23404;23405;23406;23407 23402 9 QVASFGSAAPPR Unmodified 1186.6095 0.60947067 664 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 42.021 44.803 2 0.012897 10155 Miao_Sh-H9_proteinG_mass3_141226_03 61.11 25.755 8988.6 0 0 0 0 0 0 0 0 0 0 5828 3160.6 2331 664 2286 21599;21600 23408;23409 23409 2 QVEDDIQQLLK Unmodified 1327.6983 0.69834526 437 P35998;C9JLS9 PSMC2 26S protease regulatory subunit 7 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 76.391 78.529 2 0.00025843 15515 Miao_Sh-H9_Flag_mass3_141226_01 119.39 79.761 5822.9 0 1295.6 3259.2 0 1268.1 0 0 0 0 0 0 0 2332 437 2287 21601;21602;21603;21604;21605;21606 23410;23411;23412;23413 23412 4 QVELALWDTAGQEDYDR Unmodified 2007.9174 0.91739917 151;80 P08134;Q5JR06;Q5JR07;E9PN11;E9PQH6;Q5JR08;Q5JR05;U3KQA9;U3KQV3;P62745;P61586;C9JX21;C9JNR4 RHOC;RHOB;RHOA Rho-related GTP-binding protein RhoC;Rho-related GTP-binding protein RhoB;Transforming protein RhoA no no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 84.765 79.669 3 0.044769 17434 Miao_Sh-c_proteinG_mass3_141226_01 31.115 21.833 3570.6 0 900.09 0 1229.2 0 0 0 0 0 0 0 1441.3 2333 151;80 2288 21607;21608;21609 23414 23414 1 QVHPDTGISSK Unmodified 1167.5884 0.58840088 37 Q93079;Q99879;Q99877;Q5QNW6;P58876;O60814;P62807;P57053;U3KQK0;B4DR52;Q5QNW6-2;Q99880;Q96A08 HIST1H2BH;HIST1H2BM;HIST1H2BN;HIST2H2BF;HIST1H2BD;HIST1H2BK;HIST1H2BC;H2BFS;HIST1H2BL;HIST1H2BA Histone H2B type 1-H;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-C/E/F/G/I;Histone H2B type F-S;Histone H2B;Histone H2B type 1-L;Histone H2B type 1-A no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 1 5 1 28.6 29.28 2;3 0.0011554 2777 Miao_Sh-H9_Flag_mass3_141226_02 92.781 50.445 10429 924.18 799.64 906.74 574.29 1235.2 0 758.97 890.81 0 2428 0 1911.4 2334 37 2289 21610;21611;21612;21613;21614;21615;21616;21617;21618;21619;21620;21621;21622;21623 23415;23416;23417;23418;23419;23420;23421;23422;23423;23424;23425;23426;23427;23428;23429;23430;23431;23432;23433 23425 19 QVLALQSQLADTK Unmodified 1413.7827 0.78274359 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 3 4 1 2 2 2 2 1 59.488 61.297 2;3 7.5417E-155 15023 Miao_Sh-c_proteinG_mass3_141226_03 241.07 176.01 39003 636.52 0 0 1412.4 1449.3 0 0 0 845.62 17338 8402.3 8919.1 2335 434 2290 21624;21625;21626;21627;21628;21629;21630;21631;21632;21633;21634;21635;21636;21637;21638;21639;21640;21641 23434;23435;23436;23437;23438;23439;23440;23441;23442;23443;23444;23445;23446;23447;23448;23449;23450;23451;23452;23453;23454;23455 23440 22 QVLDNLTMEK Oxidation (M) 1205.5962 0.59618837 432 P35527;CON__P35527;K7EQQ3 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 1 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 45.908 50.344 2 0.0072417 12131 Miao_Sh-H9_proteinG_mass3_141226_02 77.674 39.514 7333.7 0 0 0 0 0 2923.9 0 0 0 0 4409.8 0 + 2336 432 2291 21642;21643;21644 23456;23457 23457 55 2 QVLDNLTMEK Unmodified 1189.6013 0.60127375 432 P35527;CON__P35527;K7EQQ3 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 54.159 57.117 2 0.039002 14146 Miao_Sh-H9_proteinG_mass3_141226_03 54.343 5.2466 0 0 0 0 0 0 0 0 0 0 0 0 0 + 2337 432 2291 21645 23458 23458 1 QVSDLISVLR Unmodified 1128.6503 0.65027285 34 P17844;J3KTA4;B4DLW8 DDX5 Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 73.37 69.109 2 0.011675 21367 Miao_Sh-c_proteinG_mass3_141226_03 72.2 22.9 0 0 0 0 0 0 0 0 0 0 0 0 0 2338 34 2292 21646 23459 23459 1 QVVESAYEVIK Unmodified 1263.6711 0.67106787 309 P00338;P00338-3;P00338-4 LDHA L-lactate dehydrogenase A chain yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 1 1 1 59.661 61.798 2 0.0047147 9286 Miao_Sh-H9_Flag_mass3_141226_01 74.524 34.022 18775 0 1532.8 0 1499.7 1401.6 1573.6 0 0 1958.8 3603.9 2818.6 4385.7 2339 309 2293 21647;21648;21649;21650;21651;21652;21653;21654;21655 23460;23461 23460 2 QVVNIPSFIVR Unmodified 1270.7398 0.73975656 459 P46781 RPS9 40S ribosomal protein S9 yes yes 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 4 1 1 2 1 5 92.906 87.292 2 8.8634E-10 33238 Miao_Sh-H9_proteinG_mass3_141226_02 145.41 95.365 109860 3820.4 3572.5 1304.6 12101 10924 14151 5898.3 0 6352.2 25825 15269 10639 2340 459 2294 21656;21657;21658;21659;21660;21661;21662;21663;21664;21665;21666;21667;21668;21669;21670;21671;21672;21673;21674;21675 23462;23463;23464;23465;23466;23467;23468;23469;23470;23471;23472;23473;23474;23475;23476;23477;23478;23479;23480;23481;23482;23483;23484;23485;23486;23487 23480 26 QWGWTQGR Unmodified 1017.4781 0.47806257 231 P18621;J3QQT2;J3KRX5;P18621-3;J3QS96;J3QLC8;P18621-2;J3KRB3 RPL17 60S ribosomal protein L17 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 2 1 1 56.649 56.874 2 0.023625 8626 Miao_Sh-H9_Flag_mass3_141226_02 72.23 40.941 7985.2 0 1737.5 0 1352 0 0 525.51 852.68 2719.3 798.23 0 0 2341 231 2295 21676;21677;21678;21679;21680;21681;21682 23488;23489 23489 2 QWYESHYALPLGR Unmodified 1618.7892 0.78922595 499 P62241;Q5JR95 RPS8 40S ribosomal protein S8 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 70.469 69.767 3 0.0031663 13266 Miao_Sh-H9_Flag_mass3_141226_02 65.408 28.729 0 0 0 0 0 0 0 0 0 0 0 0 0 2342 499 2296 21683 23490 23490 1 RAFLIEEQK Unmodified 1132.6241 0.6240581 463 P49207 RPL34 60S ribosomal protein L34 yes yes 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 85.416 73.236 2;3 0.014905 29382 Miao_Sh-H9_proteinG_mass3_141226_03 92.838 40.348 2272.3 0 0 0 0 0 0 0 0 0 2272.3 0 0 2343 463 2297 21684;21685 23491;23492 23492 2 RAGELTEDEVER Unmodified 1402.6688 0.66883604 503 P62269 RPS18 40S ribosomal protein S18 yes yes 0 0 0 0 1 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 1 1 3 2 1 3 35.373 37.856 2;3 3.9456E-14 6966 Miao_Sh-c_proteinG_mass3_141226_03 151.16 103.98 31167 0 40.769 744.13 350.8 0 9717.2 0 0 0 8748.5 4254.5 7311.3 2344 503 2298 21686;21687;21688;21689;21690;21691;21692;21693;21694;21695;21696;21697;21698;21699 23493;23494;23495;23496;23497;23498;23499;23500 23495 8 RDENESPFPDIPK Unmodified 1542.7314 0.7314363 664 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 2 2 55.926 57.656 3 0.0036088 15883 Miao_Sh-H9_proteinG_mass3_141226_01 95.264 75.606 13971 0 0 0 0 0 0 0 718.34 0 3856.8 5081.6 4314.1 2345 664 2299 21700;21701;21702;21703;21704;21705 23501;23502;23503;23504;23505;23506 23502 6 RDQNYPGAIAIHHPNVAEK Unmodified 2129.0766 0.076634197 106 CON__P15636 yes yes 0 0 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 13 4 10 4 2 4 4 2 5 7 6 6 58.699 56.695 3;4;5 6.9847E-75 5358 Miao_Sh-H9_Flag_mass3_141226_02 191.71 159.23 614960 15063 18697 22750 74403 33087 62255 42785 46085 81218 83414 82769 52438 + 2346 106 2300 21706;21707;21708;21709;21710;21711;21712;21713;21714;21715;21716;21717;21718;21719;21720;21721;21722;21723;21724;21725;21726;21727;21728;21729;21730;21731;21732;21733;21734;21735;21736;21737;21738;21739;21740;21741;21742;21743;21744;21745;21746;21747;21748;21749;21750;21751;21752;21753;21754;21755;21756;21757;21758;21759;21760;21761;21762;21763;21764;21765;21766;21767;21768;21769;21770;21771;21772 23507;23508;23509;23510;23511;23512;23513;23514;23515;23516;23517;23518;23519;23520;23521;23522;23523;23524;23525;23526;23527;23528;23529;23530;23531;23532;23533;23534;23535;23536;23537;23538;23539;23540;23541;23542;23543;23544;23545;23546;23547;23548;23549;23550;23551;23552;23553;23554;23555;23556;23557;23558;23559;23560;23561;23562;23563;23564;23565;23566;23567;23568;23569;23570;23571;23572;23573;23574;23575;23576;23577;23578;23579;23580;23581;23582;23583;23584;23585;23586;23587;23588;23589;23590;23591;23592;23593;23594;23595;23596;23597;23598;23599;23600;23601;23602;23603;23604;23605;23606;23607;23608;23609;23610;23611;23612 23569 106 RDQNYPGAIAIHHPNVAEKR Unmodified 2285.1777 0.17774523 106 CON__P15636 yes yes 0 0 0 0 2 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 1 2 2 1 2 2 1 2 52.551 51.966 4;5 6.7758E-05 4642 Miao_Sh-H9_Flag_mass3_141226_03 65.765 54.999 19712 1029 826.44 0 1276.3 3352 0 464.91 2053.4 2555 664.34 7490.3 0 + 2347 106 2301 21773;21774;21775;21776;21777;21778;21779;21780;21781;21782;21783;21784;21785;21786;21787 23613;23614;23615;23616;23617;23618;23619;23620;23621;23622;23623 23620 11 REEEEFNTGPLSVLTQSVK Unmodified 2162.0855 0.085527128 507 P62316;K7ERG4;P62316-2 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 115.82 98.626 3 0.0010374 37097 Miao_Sh-H9_proteinG_mass3_141226_03 63.225 54.432 0 0 0 0 0 0 0 0 0 0 0 0 0 2348 507 2302 21788 23624 23624 1 REQEVNILK Unmodified 1127.6299 0.62987176 433 P35579 MYH9 Myosin-9 yes yes 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 2 1 41.58 43.385 2;3 3.6426E-11 8977 Miao_Sh-H9_proteinG_mass3_141226_01 136.36 67.704 1408.8 0 0 0 0 0 0 0 0 0 465.68 0 943.15 2349 433 2303 21789;21790;21791 23625;23626 23625 2 RFFPYYVYNIIGGLDEEGK Unmodified 2279.1263 0.12626973 391 P20618 PSMB1 Proteasome subunit beta type-1 yes yes 0 0 0 0 1 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 102.93 104.23 3 0.0023131 22658 Miao_Sh-c_Flag_mass3_141226_03 58.123 41.76 0 0 0 0 0 0 0 0 0 0 0 0 0 2350 391 2304 21792 23627 23627 1 RGAPAAATAPAPTAHK Unmodified 1486.8005 0.80045934 623 Q92522 H1FX Histone H1x yes yes 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 27.898 28.324 4 0.0094445 5838 Miao_Sh-H9_proteinG_mass3_141226_01 41.188 26.026 984.1 20.282 0 74.368 0 0 0 0 0 0 504.35 0 385.11 2351 623 2305 21793;21794;21795;21796 23628;23629 23628 2 RGDLPFVVPR Unmodified 1154.656 0.65602693 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 2 2 3 2 3 6 2 2 3 3 8 4 66.813 66.152 2;3 1.7631E-08 34914 Miao_Sh-H9_proteinG_mass3_141226_03 147.62 98.563 108400 3933.5 4290.2 5893.5 21281 280.04 7804.5 3745.9 5696 8865.2 12379 22993 11242 2352 433 2306 21797;21798;21799;21800;21801;21802;21803;21804;21805;21806;21807;21808;21809;21810;21811;21812;21813;21814;21815;21816;21817;21818;21819;21820;21821;21822;21823;21824;21825;21826;21827;21828;21829;21830;21831;21832;21833;21834;21835;21836 23630;23631;23632;23633;23634;23635;23636;23637;23638;23639;23640;23641;23642;23643;23644;23645;23646;23647;23648;23649;23650;23651;23652;23653;23654;23655;23656;23657;23658;23659;23660 23659 30 RGFAFVTFDDHDSVDK Unmodified 1854.8537 0.8536767 180 P09651;F8W6I7;P09651-3;P09651-2;F8VZ49;Q32P51;F8VTQ5;H0YH80 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 106.66 94.482 4 0.0025714 33734 Miao_Sh-H9_proteinG_mass3_141226_01 50.831 39.326 2869.6 0 0 0 0 0 0 0 0 0 2869.6 0 0 2353 180 2307 21837 23661 23661 1 RGFGFVTFDDHDPVDK Unmodified 1850.8588 0.85876208 397 P22626;P22626-2 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 0 0 1 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 67.397 68.667 4 0.04951 12428 Miao_Sh-c_proteinG_mass3_141226_01 23.635 15.591 2362.1 0 0 0 1659.9 0 0 0 0 0 322.03 380.17 0 2354 397 2308 21838;21839;21840 23662;23663 23662 2 RHPEYAVSVLLR Unmodified 1438.8045 0.80448208 99 CON__P02769 yes yes 0 0 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 1 1 57.608 58.402 3 0.0020446 7792 Miao_Sh-c_Flag_mass3_141226_02 69.03 55.221 10087 1425 1219.4 1251.3 0 1755.3 0 1775.5 2660.8 0 0 0 0 + 2355 99 2309 21841;21842;21843;21844;21845;21846;21847;21848 23664;23665;23666;23667;23668;23669 23665 5 RIQLVEEELDR Unmodified 1398.7467 0.74669243 335;342;526;226;212 P07951-2;Q5TCU3;P07951-3;P07951;CON__Q3SX28;Q5TCU8;P67936-2;K7ERG3;K7ENT6;H0YL80;K7EP68;P09493;P09493-3;H0YL52;P09493-9;P09493-4;P09493-10;H0YKX5;H0YKP3;Q6ZN40;P09493-2;H0YNC7;F5H7S3;H7BYY1;H0YK48;B7Z596;P09493-5;P09493-8;P09493-7;P09493-6;P06753-2;Q5VU59;P06753-5;P06753-3;P06753-4;P06753-6;D6R904;P67936;J3KN67;P06753 TPM2;TPM4;TPM1;TPM3 Tropomyosin beta chain;Tropomyosin alpha-4 chain;Tropomyosin alpha-1 chain;Tropomyosin alpha-3 chain no no 0 0 0 0 1 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 57.478 58.631 3 0.00075514 8745 Miao_Sh-c_proteinG_mass3_141226_01 124.12 80.682 0 0 0 0 0 0 0 0 0 0 0 0 0 + 2356 342;212;335;526;226 2310 21849 23670 23670 1 RISGLIYEETR Unmodified 1335.7147 0.71466402 513 P62805 HIST1H4A Histone H4 yes yes 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 95.851 86.829 3 0.016408 29579 Miao_Sh-H9_proteinG_mass3_141226_02 74.698 51.326 2087.9 0 0 0 0 0 0 0 0 0 0 2087.9 0 2357 513 2311 21850 23671 23671 0 RKLEGDSTDLSDQIAELQAQIAELK Unmodified 2770.4349 0.43486693 433 P35579 MYH9 Myosin-9 yes yes 0 0 0 0 2 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 116.83 104.65 4 1.6711E-19 37931 Miao_Sh-H9_proteinG_mass3_141226_01 100.04 88.614 7607 0 0 0 0 0 0 0 0 0 7607 0 0 2358 433 2312 21851 23672 23672 1 RKVDWLTEK Unmodified 1173.6506 0.6506072 488 P60842;J3QL43;J3KT12;P60842-2;Q14240;J3QS69;E7EQG2;Q14240-2;Q9NZE6;J3KTN0;J3KSZ0;P38919;J3QL52 EIF4A1;EIF4A2;EIF4A3 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes no 0 0 0 0 2 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 42.492 42.141 3 0.0059033 4649 Miao_Sh-H9_Flag_mass3_141226_01 104.39 48.351 2020.6 236.76 407.96 0 0 0 0 360.76 544.67 470.44 0 0 0 2359 488 2313 21852;21853;21854;21855;21856 23673 23673 1 RLDVTVQSFGWSDR Unmodified 1664.8271 0.82706802 612 Q8NCA5;Q8NCA5-2;E9PH82;B4DT23 FAM98A Protein FAM98A no no 0 0 0 0 1 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 71.25 72.604 3 0.00020157 13993 Miao_Sh-c_proteinG_mass3_141226_01 87.647 66.859 0 0 0 0 0 0 0 0 0 0 0 0 0 2360 612 2314 21857 23674 23674 1 RNDFQLIGIQDGYLSLLQDSGEVR Unmodified 2735.3879 0.38785716 225 P63241;I3L397;I3L504;P63241-2 EIF5A Eukaryotic translation initiation factor 5A-1 yes no 0 0 0 0 1 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 101.38 102.83 3 2.1842E-20 38179 Miao_Sh-H9_proteinG_mass3_141226_01 94.73 71.436 4483.8 0 0 0 4483.8 0 0 0 0 0 0 0 0 2361 225 2315 21858;21859 23675;23676 23676 2 RNLDIERPTYTNLNR Unmodified 1873.9759 0.97585752 529 P68363 TUBA1B Tubulin alpha-1B chain no no 0 0 0 0 2 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 49.914 50.946 4 0.0012932 5979 Miao_Sh-c_Flag_mass3_141226_02 73.834 40.901 4558 667.06 620.59 0 679.84 532.61 0 0 2057.9 0 0 0 0 2362 529 2316 21860;21861;21862;21863;21864 23677 23677 1 RNVIEAVYSR Unmodified 1205.6517 0.65166983 297;296 O75688-2;C9JIR6;O75688-4;B8ZZF0;O75688;O75688-3 PPM1B Protein phosphatase 1B no no 0 0 0 0 1 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 1 2 1 50.702 51.661 2;3 0.00011228 5838 Miao_Sh-c_Flag_mass3_141226_03 130.79 97.43 19007 1601.7 1628.9 1612.8 0 0 164.67 4697.1 4334 4967.7 0 0 0 2363 297;296 2317 21865;21866;21867;21868;21869;21870;21871;21872 23678;23679;23680;23681;23682;23683;23684 23680 7 RNYILDQTNVYGSAQR Unmodified 1896.9442 0.94422304 643 Q9BUJ2;Q9BUJ2-2;B7Z4B8;Q9BUJ2-4;M0R3F1;Q9BUJ2-3 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 56.252 56.903 3 0.0011989 15359 Miao_Sh-H9_proteinG_mass3_141226_01 73.093 56.73 4793.5 422.07 869.76 277.36 1026.5 0 0 0 0 0 2197.8 0 0 2364 643 2318 21873;21874;21875;21876;21877 23685 23685 1 RPFGISALIVGFDFDGTPR Unmodified 2064.0793 0.079259959 269 O14818;O14818-2;H0Y586 PSMA7 Proteasome subunit alpha type-7 yes no 0 0 0 0 1 By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 102.5 102.5 3 0.002791 22340 Miao_Sh-c_Flag_mass3_141226_01 61.959 51.16 2613.2 2613.2 0 0 0 0 0 0 0 0 0 0 0 2365 269 2319 21878;21879 23686;23687 23686 2 RPFGVSLLYIGWDK Unmodified 1649.893 0.89296274 213 P25789;H0YMZ1;H0YL69;H0YMI6;H0YMA1;H0YN18;H0YLC2;H0YKT8;P25789-2;H0YKS0;H0YMV3 PSMA4 Proteasome subunit alpha type-4;Proteasome subunit alpha type;Proteasome subunit beta type yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 95.129 92.553 3 0.0046092 21377 Miao_Sh-H9_Flag_mass3_141226_02 80.632 55.102 12382 0 568.8 2903.8 0 0 637.34 4219.3 4053.2 0 0 0 0 2366 213 2320 21880;21881;21882;21883;21884 23688 23688 1 RPLEQQQPHHIPTSAPVYQQPQQQPVAQSYGGYK Unmodified 3884.9347 0.93466799 76 Q14847;C9J9W2;Q14847-3;Q14847-2;J3KSN1 LASP1 LIM and SH3 domain protein 1 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 53.967 53.816 5 0.053446 7583 Miao_Sh-H9_Flag_mass3_141226_01 7.8305 6.3881 1607.2 0 0 0 0 0 0 1607.2 0 0 0 0 0 2367 76 2321 21885 23689 23689 0 RPLIDQVVQTALSETQDPEEVSVTVK Unmodified 2880.508 0.50803187 535 Q00610;Q00610-2 CLTC Clathrin heavy chain 1 yes no 0 0 0 0 1 By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 104.14 101.43 3 1.3782E-05 21511 Miao_Sh-c_Flag_mass3_141226_03 57.058 50.846 0 0 0 0 0 0 0 0 0 0 0 0 0 2368 535 2322 21886;21887;21888;21889 23690;23691;23692;23693 23691 4 RPTPQDSPIFLPVDDTSFR Unmodified 2187.096 0.096032235 464 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 78.33 80.385 3 0.033096 17130 Miao_Sh-H9_Flag_mass3_141226_03 39.276 28.231 7808.9 0 0 0 0 2876.4 0 0 0 4932.5 0 0 0 2369 464 2323 21890;21891 23694 23694 0 RQAQQERDELADEIANSSGK Unmodified 2244.0731 0.073064962 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 2 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 48.519 51.293 4 1.4287E-08 11350 Miao_Sh-c_proteinG_mass3_141226_03 88.574 76.106 16733 0 0 536.73 1112.1 192.41 5331.8 0 0 0 5297.2 4262.9 0 2370 433 2324 21892;21893;21894;21895;21896;21897 23695;23696;23697 23695 3 RQAVTNPNNTFYATK Unmodified 1723.8642 0.86418181 441 P38646;D6RJI2;D6RA73 HSPA9 Stress-70 protein, mitochondrial yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 39.767 42.524 3 0.00092673 8722 Miao_Sh-c_proteinG_mass3_141226_03 66.982 45.586 9838.5 104.02 0 0 0 131.75 3536.3 0 0 0 2224.1 2020.7 1821.6 2371 441 2325 21898;21899;21900;21901;21902;21903 23698;23699;23700 23698 2 RQLEEAEEEAQR Unmodified 1486.7012 0.7011988 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 3 1 2 1 2 2 2 4 4 42.064 42.831 2;3 6.1247E-83 7400 Miao_Sh-H9_proteinG_mass3_141226_01 216.83 178.25 103670 659.93 489.18 539.5 835.27 586.39 18902 407.7 5950 4261.4 31799 16468 22774 2372 433 2326 21904;21905;21906;21907;21908;21909;21910;21911;21912;21913;21914;21915;21916;21917;21918;21919;21920;21921;21922;21923;21924;21925;21926;21927 23701;23702;23703;23704;23705;23706;23707;23708;23709;23710;23711;23712;23713;23714;23715;23716;23717;23718;23719;23720;23721;23722;23723;23724;23725;23726;23727;23728;23729;23730;23731 23712 31 RQLEEAEEEATR Unmodified 1459.6903 0.69029976 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 2 1 1 2 2 35.227 37.082 2;3 0.0024234 7408 Miao_Sh-H9_proteinG_mass3_141226_02 123.75 87.495 12628 0 0 99.732 0 0 2735.3 180.17 0 0 3707 2976.6 2929.7 2373 434 2327 21928;21929;21930;21931;21932;21933;21934;21935;21936 23732;23733;23734;23735;23736;23737;23738 23734 7 RSDAEPSVFLFKPSDEQLK Unmodified 2192.1113 0.11134795 110 CON__Q05B55 yes yes 0 0 0 0 2 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching 2 2 2 1 1 1 73.011 73.556 3;4 7.0446E-08 13009 Miao_Sh-c_proteinG_mass3_141226_02 93.5 75.484 19058 0 0 0 8723.6 4289.6 4693 0 757.29 0 0 0 594.57 + 2374 110 2328 21937;21938;21939;21940;21941;21942;21943;21944;21945 23739;23740;23741;23742;23743 23740 5 RTNAENEFVTIK Unmodified 1420.731 0.73104237 314 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 2 1 1 46.087 48.493 2;3 0.014237 11366 Miao_Sh-H9_proteinG_mass3_141226_03 80.905 53.424 15243 0 0 0 407.06 669.4 5254.9 0 263.02 0 5891.7 2756.5 0 + 2375 314 2329 21946;21947;21948;21949;21950;21951;21952;21953 23744;23745;23746 23746 2 RVLGQLHGGPSSCSATGTNR Unmodified 2054.0076 0.007568354 106 CON__P15636 yes yes 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 36.338 37.849 4 4.3848E-10 6904 Miao_Sh-c_proteinG_mass3_141226_03 100.02 83.84 7984.3 0 0 0 0 156.18 1798.7 1045.9 713.88 854.53 1796.1 1619 0 + 2376 106 2330 21954;21955;21956;21957;21958;21959;21960 23747;23748;23749;23750;23751;23752;23753;23754 23747 8 RVLQALEGLK Unmodified 1125.687 0.68699271 442 P39019 RPS19 40S ribosomal protein S19 yes yes 0 0 0 0 1 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 1 54.656 56.226 3 0.0080895 8138 Miao_Sh-c_proteinG_mass3_141226_01 120.45 64.776 7001 0 808.75 0 679.18 486.02 0 0 0 1498.4 2551.2 0 977.34 2377 442 2331 21961;21962;21963;21964;21965;21966 23755;23756 23755 2 RYDDPEVQK Unmodified 1148.5462 0.54620171 441 P38646;D6RJI2 HSPA9 Stress-70 protein, mitochondrial yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 2 2 30.769 31.29 2;3 1.5343E-11 5876 Miao_Sh-H9_proteinG_mass3_141226_02 141.29 79.331 3274.8 0 0 0 120.25 0 0 135.58 0 0 944.02 950.23 1124.7 2378 441 2332 21967;21968;21969;21970;21971;21972;21973;21974 23757;23758;23759;23760;23761;23762;23763;23764 23763 8 RYNEDLELEDAIHTAILTLK Unmodified 2356.2274 0.22744034 411 P25787;C9JCK5 PSMA2 Proteasome subunit alpha type-2 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 109.22 104.23 4 0.00074172 23977 Miao_Sh-H9_Flag_mass3_141226_01 51.524 42.766 4083.8 0 0 0 0 0 0 823.31 0 0 0 3260.5 0 2379 411 2333 21975;21976 23765 23765 1 SAATSGAGSTTSGVVSGSLGSR Unmodified 1895.9185 0.9184618 600 Q7Z6Z7;Q7Z6Z7-2;Q7Z6Z7-3;H0Y5W0 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 48.724 48.372 3 2.9834E-06 5960 Miao_Sh-H9_Flag_mass3_141226_01 64.522 40.097 0 0 0 0 0 0 0 0 0 0 0 0 0 2380 600 2334 21977 23766 23766 1 SADTLWDIQK Unmodified 1175.5823 0.58225287 336 P07195 LDHB L-lactate dehydrogenase B chain yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 1 1 2 64.532 66.386 2 1.068E-06 11589 Miao_Sh-H9_Flag_mass3_141226_01 128.51 78.406 16336 0 0 297.12 5481.2 0 7368.4 0 3189.5 0 0 0 0 2381 336 2335 21978;21979;21980;21981;21982;21983;21984 23767;23768;23769;23770 23768 3 SADTLWGIQK Unmodified 1117.5768 0.57677356 309 P00338;P00338-3;P00338-4 LDHA L-lactate dehydrogenase A chain yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 2 59.686 62.443 2 7.0464E-14 16993 Miao_Sh-H9_proteinG_mass3_141226_01 155.5 116.72 15632 0 0 0 959.87 2635.4 3255.9 0 0 0 4794.2 3986.6 0 2382 309 2336 21985;21986;21987;21988;21989;21990 23771;23772;23773;23774 23773 4 SAESLHPGQTQVLIIDGADR Unmodified 2106.0705 0.070545766 639 Q99973;Q99973-2;G3V470;G3V5X7;G3V2A4 TEP1 Telomerase protein component 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 61.885 63.138 3 0.04791 10459 Miao_Sh-c_proteinG_mass3_141226_01 31.917 21.056 0 0 0 0 0 0 0 0 0 0 0 0 0 2383 639 2337 21991 23775 23775 1 SAHLQWMVVR Acetyl (Protein N-term) 1267.6496 0.64956134 210 P46779;H0YKD8;P46779-2;P46779-3;H0YMF4;P46779-4;P46779-5;H0YLP6 RPL28 60S ribosomal protein L28 yes no 1 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 1 1 1 1 1 74.97 71.5 2 1.8057E-07 13931 Miao_Sh-c_Flag_mass3_141226_02 139.86 65.017 39778 0 4443.4 3321.6 5697.1 0 2277.4 9372 6117.4 4386.8 2898.8 0 1264 2384 210 2338 21992;21993;21994;21995;21996;21997;21998;21999;22000;22001 23776;23777;23778;23779;23780;23781;23782;23783;23784;23785;23786;23787 23776 12 SAINEVVTR Unmodified 987.53491 0.53490874 518 P62899;P62899-3;P62899-2;H7C2W9;C9JU56;B7Z4E3;B7Z4C8;B8ZZK4 RPL31 60S ribosomal protein L31 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 1 2 1 1 1 1 1 1 1 1 1 1 42.245 43.836 2 3.8465E-23 8908 Miao_Sh-c_proteinG_mass3_141226_03 179.42 116.71 170640 2353.6 0 1904.1 1617.2 1405.4 42957 2784.1 2800.5 2700.8 48785 37217 26114 2385 518 2339 22002;22003;22004;22005;22006;22007;22008;22009;22010;22011;22012;22013;22014 23788;23789;23790;23791;23792;23793;23794;23795;23796;23797;23798;23799;23800;23801;23802;23803;23804;23805 23798 18 SALALAIK Unmodified 785.50109 0.50108942 213 P25789;H0YMZ1;H0YL69;H0YMI6;H0YMA1;H0YN18;H0YKT8;P25789-2;H0YKS0 PSMA4 Proteasome subunit alpha type-4;Proteasome subunit alpha type;Proteasome subunit beta type yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 1 56.008 56.526 2 0.022584 7203 Miao_Sh-c_Flag_mass3_141226_03 78.77 32.107 6826.1 754.93 947.75 782.83 0 0 0 1831.4 1775.7 0 0 733.56 0 2386 213 2340 22015;22016;22017;22018;22019;22020 23806 23806 1 SALAPNLLTSGK Unmodified 1170.6608 0.66083754 276 O15446;O15446-2 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 2 1 3 62.304 59.938 2 0.0010941 15290 Miao_Sh-H9_proteinG_mass3_141226_03 88.021 26.241 13697 630.73 0 0 0 0 0 0 2698.6 0 4589.1 4757.4 1021 2387 276 2341 22021;22022;22023;22024;22025;22026;22027;22028 23807;23808;23809;23810;23811;23812 23812 5 SALSGHLETVILGLLK Unmodified 1649.9716 0.97160699 337 P07355;P07355-2;H0YMM1;H0YKS4;H0YMD0;H0YMU9;H0YN42;A6NMY6;H0YKL9;H0YKZ7;H0YLV6;H0YMT9;H0YKX9;H0YMW4;H0YNP5;H0YM50 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 2 2 2 1 1 1 1 107.87 106.83 3 3.2901E-05 25725 Miao_Sh-c_proteinG_mass3_141226_01 72.615 66.533 14048 1412.9 0 1665.3 3505.4 0 0 1893 2214.8 2042.1 0 1314.6 0 2388 337 2342 22029;22030;22031;22032;22033;22034;22035;22036;22037;22038;22039 23813;23814;23815;23816;23817;23818;23819;23820 23815 8 SASAPAAEGEGTPTQPASEK Acetyl (Protein N-term) 1926.8807 0.88067931 436 P35659;B4DFG0;P35659-2 DEK Protein DEK yes no 1 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 39.613 42.02 2 1.0271E-05 9232 Miao_Sh-H9_proteinG_mass3_141226_02 63.302 54.96 1163.1 0 0 0 0 0 0 0 0 0 0 1163.1 0 2389 436 2343 22040 23821;23822;23823;23824;23825 23821 5 SDAAVDTSSEITTK Acetyl (Protein N-term) 1465.6784 0.67839767 68 P06454;P06454-2;B8ZZQ6 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 yes no 1 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 2 1 48.529 50.293 2 0.0011882 13047 Miao_Sh-H9_proteinG_mass3_141226_01 65.374 53.106 2962.5 0 0 0 0 0 0 0 0 0 1858.8 1103.7 0 2390 68 2344 22041;22042;22043 23826;23827 23826 2 SDAEPSVFLFKPSDEQLK Unmodified 2036.0102 0.01023692 110 CON__Q05B55 yes yes 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 71.521 67.26 3 0.010488 20824 Miao_Sh-c_proteinG_mass3_141226_03 42.716 26.543 0 0 0 0 0 0 0 0 0 0 0 0 0 + 2391 110 2345 22044 23828 23828 1 SDFDEFER Acetyl (Protein N-term) 1085.4302 0.4301689 413 P26368;P26368-2 U2AF2 Splicing factor U2AF 65 kDa subunit yes no 1 0 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 2 1 1 1 1 1 1 2 66.786 68.053 2 0.0015101 18249 Miao_Sh-c_proteinG_mass3_141226_03 111.74 72.776 9855.8 0 551.17 653.93 324.63 0 1840 168.15 776.54 1302.6 1658.8 0 2580 2392 413 2346 22045;22046;22047;22048;22049;22050;22051;22052;22053;22054;22055 23829;23830;23831;23832;23833 23831 5 SDIDEIVLVGGSTR Unmodified 1459.7518 0.75183739 355 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 2 1 4 77.243 73.525 2 1.0624E-37 13936 Miao_Sh-H9_Flag_mass3_141226_01 167.21 136.9 12838 0 0 0 0 2581.1 0 0 0 958.75 6555.7 2318.2 424.19 2393 355 2347 22056;22057;22058;22059;22060;22061;22062;22063;22064;22065;22066;22067;22068 23834;23835;23836;23837;23838;23839;23840;23841;23842;23843;23844 23837 11 SDIGEVILVGGMTR Unmodified 1445.7548 0.75481428 441 P38646;H0YBG6 HSPA9 Stress-70 protein, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 4 1 1 2 4 1 86.358 81.076 2;3 3.4616E-12 16836 Miao_Sh-c_proteinG_mass3_141226_01 141.34 111.81 28749 1744 0 573.27 9612.8 1308.8 1398.2 0 1917.5 964.07 9092.9 1157.6 980.03 2394 441 2348 22069;22070;22071;22072;22073;22074;22075;22076;22077;22078;22079;22080;22081;22082;22083;22084;22085 23845;23846;23847;23848;23849;23850;23851;23852;23853;23854 23845 10 SDIGEVILVGGMTR Oxidation (M) 1461.7497 0.7497289 441 P38646;H0YBG6 HSPA9 Stress-70 protein, mitochondrial yes no 0 0 1 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 1 3 3 1 2 1 3 69.708 69.758 2;3 0.0017309 18501 Miao_Sh-c_proteinG_mass3_141226_03 73.802 53.595 11398 0 1257.4 0 0 0 716.74 0 767.27 0 5589.1 106.38 2961.4 2395 441 2348 22086;22087;22088;22089;22090;22091;22092;22093;22094;22095;22096;22097;22098;22099 23855;23856;23857;23858;23859;23860;23861;23862 23858 61 8 SDLEEDNER Unmodified 1105.4524 0.4523609 617 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching 1 2 1 1 1 1 1 1 1 30.438 30.989 2 7.981E-18 2838 Miao_Sh-c_Flag_mass3_141226_02 150.35 122.17 1921.3 553.09 73.567 446.28 342.74 0 0 298.94 0 0 0 0 206.69 2396 617 2349 22100;22101;22102;22103;22104;22105;22106;22107;22108;22109 23863;23864;23865;23866;23867;23868;23869;23870 23864 8 SDLLLEGFNNYR Unmodified 1439.7045 0.70449327 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 2 2 1 2 1 91.735 87.145 2;3 1.8674E-25 17341 Miao_Sh-c_proteinG_mass3_141226_02 160.72 108.55 29514 0 1308.8 1534.5 9527.2 0 5936 5565 0 0 699.45 4943.2 0 2397 434 2350 22110;22111;22112;22113;22114;22115;22116;22117;22118;22119;22120;22121 23871;23872;23873;23874;23875;23876;23877;23878;23879 23874 8 SDQNLQTALELTR Unmodified 1487.758 0.7579854 302 O95373 IPO7 Importin-7 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 78.221 70.301 2 0.00045824 19627 Miao_Sh-H9_proteinG_mass3_141226_01 78.814 54.389 1384.6 0 0 0 1134.4 0 0 0 0 0 0 0 250.15 2398 302 2351 22122;22123;22124 23880;23881 23881 2 SDSIRPALNSPVERPSSDQEEGETSAQTER Unmodified 3271.5189 0.51888393 666 Q9UKV5;H3BRK9;R4GNG2 AMFR E3 ubiquitin-protein ligase AMFR yes no 0 0 0 0 2 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 49.108 48.757 4 0.00065974 6049 Miao_Sh-H9_Flag_mass3_141226_01 35.596 31.1 1655.9 0 0 0 0 0 0 1655.9 0 0 0 0 0 2399 666 2352 22125 23882 23882 0 SDTFINLR Unmodified 964.49779 0.49779495 385 P17655;P17655-2 CAPN2 Calpain-2 catalytic subunit yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 61.229 60.326 2 0.022941 10007 Miao_Sh-H9_Flag_mass3_141226_02 73.208 34.245 0 0 0 0 0 0 0 0 0 0 0 0 0 2400 385 2353 22126 23883 23883 1 SDVEAIFSK Unmodified 994.49713 0.49712625 50 P07910;P07910-2;G3V576;G3V4W0;B4DY08;G3V4C1;G3V2Q1;P07910-4;O60812;G3V555;G3V575;G3V4M8;G3V5X6;G3V3K6;G3V251;B4DSU6;G3V2H6 HNRNPC;HNRNPCL1 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 57.743 60.316 2 0.001519 14690 Miao_Sh-c_proteinG_mass3_141226_03 115.78 87.573 13169 657.03 0 0 0 256.64 3933.9 0 0 1509.9 0 3007.3 3804.2 2401 50 2354 22127;22128;22129;22130;22131;22132 23884;23885;23886;23887 23884 4 SDVLLGTAALDIYETLK Unmodified 1820.9771 0.97714588 634 Q96J02;Q96J02-2 ITCH E3 ubiquitin-protein ligase Itchy homolog yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 110.29 110.64 3 0.024156 25466 Miao_Sh-c_Flag_mass3_141226_02 37.645 28.343 0 0 0 0 0 0 0 0 0 0 0 0 0 2402 634 2355 22133 23888 23888 1 SEAGEATTTTTTTLPQAPTEAAAAAPQDPAPK Acetyl (Protein N-term) 3136.5048 0.50479699 381 P16989;P16989-2;P16989-3 YBX3 Y-box-binding protein 3 yes no 1 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 65.918 66.269 3 7.5073E-08 18778 Miao_Sh-H9_proteinG_mass3_141226_01 47.439 44.318 2914.2 0 0 0 0 0 0 0 0 0 2914.2 0 0 2403 381 2356 22134 23889 23889 1 SEEELLVIFNK Unmodified 1319.6973 0.69728262 654 Q9NX58 LYAR Cell growth-regulating nucleolar protein yes yes 0 0 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 1 2 1 3 1 104.71 95.986 2 0.0016841 19011 Miao_Sh-c_proteinG_mass3_141226_02 111.27 79.844 3417.5 0 0 0 0 0 0 0 0 960.87 0 0 2456.7 2404 654 2357 22135;22136;22137;22138;22139;22140;22141;22142;22143 23890;23891;23892;23893;23894;23895;23896;23897 23891 8 SEGVVAVLLTK Unmodified 1114.6598 0.6597749 464 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 73.602 64.579 2 0.015954 21760 Miao_Sh-H9_proteinG_mass3_141226_02 62.088 34.834 0 0 0 0 0 0 0 0 0 0 0 0 0 2405 464 2358 22144 23898 23898 1 SEISELR Unmodified 832.42905 0.42904669 97;109 P02533;CON__P02533;Q04695;CON__Q04695;CON__Q9QWL7;F5GWP8 KRT14;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 41.694 44.618 2 0.039094 9396 Miao_Sh-H9_proteinG_mass3_141226_01 70.67 14.579 3065.1 0 0 0 181.52 0 931.73 0 0 0 1951.8 0 0 + 2406 97;109 2359 22145;22146;22147 23899 23899 1 SEPIPESNDGPVK Unmodified 1367.6569 0.65687437 197 P30101;G5EA52 PDIA3 Protein disulfide-isomerase A3 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 42.288 44.563 2 0.030771 9366 Miao_Sh-H9_proteinG_mass3_141226_03 51.135 36.461 2950.9 126.57 0 0 0 0 1313 0 0 41.6 0 563.58 906.11 2407 197 2360 22148;22149;22150;22151;22152 23900 23900 1 SESPKEPEQLR Unmodified 1298.6466 0.64664404 180 P09651;F8W6I7;P09651-3;P09651-2;F8VTQ5;F8W646 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 31.946 34.076 2;3 0.002232 6304 Miao_Sh-H9_proteinG_mass3_141226_03 96.229 76.571 7447.4 0 0 0 0 118.73 1934.4 45.29 0 0 2059.2 1789.7 1500.1 2408 180 2361 22153;22154;22155;22156;22157;22158;22159 23901;23902;23903;23904;23905;23906;23907 23905 7 SETAPAAPAAAPPAEK Acetyl (Protein N-term) 1519.7518 0.75183739 379 P16403 HIST1H1C Histone H1.2 yes yes 1 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 2 2 3 2 4 2 2 2 4 2 43.162 44.859 2;3 6.4171E-11 10468 Miao_Sh-H9_proteinG_mass3_141226_02 126.63 24.548 255350 6139.9 13343 4615.6 3316.5 3612.1 44092 1827.7 9989.5 9430.3 49535 63108 46342 2409 379 2362 22160;22161;22162;22163;22164;22165;22166;22167;22168;22169;22170;22171;22172;22173;22174;22175;22176;22177;22178;22179;22180;22181;22182;22183;22184;22185;22186;22187;22188;22189;22190 23908;23909;23910;23911;23912;23913;23914;23915;23916;23917;23918;23919;23920;23921;23922;23923;23924;23925;23926;23927;23928;23929;23930;23931;23932;23933;23934;23935;23936;23937;23938;23939;23940;23941;23942;23943;23944;23945;23946;23947;23948;23949;23950;23951;23952;23953;23954;23955;23956;23957;23958;23959;23960;23961 23953 54 SETAPAAPAAAPPAEK Unmodified 1477.7413 0.7412727 379 P16403 HIST1H1C Histone H1.2 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 2 2 37.512 39.216 2;3 3.1384E-08 8070 Miao_Sh-H9_proteinG_mass3_141226_03 87.138 2.2794 2052.5 0 0 0 0 0 0 0 0 0 788.3 0 1264.2 2410 379 2362 22191;22192;22193;22194 23962;23963;23964 23964 3 SETAPAAPAAPAPAEK Acetyl (Protein N-term) 1519.7518 0.75183739 352 P10412 HIST1H1E Histone H1.4 yes yes 1 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 2 1 1 1 3 44.166 45.56 2;3 4.5179E-13 10709 Miao_Sh-H9_proteinG_mass3_141226_02 134.76 6.0173 223990 2046.6 1908.1 1774.5 0 6231.6 0 0 18435 4654.3 17283 80595 91064 2411 352 2363 22195;22196;22197;22198;22199;22200;22201;22202;22203;22204;22205;22206;22207 23965;23966;23967;23968;23969;23970;23971;23972;23973;23974;23975;23976;23977;23978;23979;23980;23981 23978 17 SETAPAAPAAPAPAEK Unmodified 1477.7413 0.7412727 352 P10412 HIST1H1E Histone H1.4 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 1 1 2 1 1 3 3 1 38.888 39.944 2;3 9.1136E-09 8745 Miao_Sh-H9_proteinG_mass3_141226_01 94.922 5.6101 11744 210.93 270.98 290.61 0 185.24 0 450.25 354.26 0 1400.8 7316.6 1264.2 2412 352 2363 22208;22209;22210;22211;22212;22213;22214;22215;22216;22217;22218;22219;22220;22221;22222;22223;22224;22225 23982;23983;23984;23985;23986;23987;23988;23989;23990;23991;23992;23993 23987 12 SETAPAETATPAPVEK Acetyl (Protein N-term) 1639.7941 0.79409613 377 P16401 HIST1H1B Histone H1.5 yes yes 1 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 4 4 3 3 7 2 45.744 46.991 2;3 1.5999E-93 11106 Miao_Sh-H9_proteinG_mass3_141226_02 209.6 182.89 529120 17677 19399 17805 16198 14405 24716 31589 32577 38063 119530 101390 95778 2413 377 2364 22226;22227;22228;22229;22230;22231;22232;22233;22234;22235;22236;22237;22238;22239;22240;22241;22242;22243;22244;22245;22246;22247;22248;22249;22250;22251;22252;22253;22254;22255;22256;22257;22258;22259;22260 23994;23995;23996;23997;23998;23999;24000;24001;24002;24003;24004;24005;24006;24007;24008;24009;24010;24011;24012;24013;24014;24015;24016;24017;24018;24019;24020;24021;24022;24023;24024;24025;24026;24027;24028;24029;24030;24031;24032;24033;24034;24035;24036;24037;24038;24039;24040;24041;24042;24043;24044;24045;24046;24047;24048;24049;24050;24051;24052;24053;24054;24055;24056;24057;24058;24059;24060;24061;24062;24063;24064;24065 24049 71 SETAPAETATPAPVEK Unmodified 1597.7835 0.78353145 377 P16401 HIST1H1B Histone H1.5 yes yes 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 2 1 3 1 6 1 3 37.945 40.031 2;3 1.3379E-82 8958 Miao_Sh-H9_proteinG_mass3_141226_01 194.77 170.68 14503 235.81 0 48.549 0 215 9980.3 0 64.871 656.82 3301.3 0 0 2414 377 2364 22261;22262;22263;22264;22265;22266;22267;22268;22269;22270;22271;22272;22273;22274;22275;22276;22277;22278;22279;22280;22281;22282;22283 24066;24067;24068;24069;24070;24071;24072;24073;24074;24075;24076;24077;24078;24079;24080;24081;24082;24083;24084;24085 24079 20 SETAPLAPTIPAPAEK Acetyl (Protein N-term) 1633.8563 0.85630246 378 P16402 HIST1H1D Histone H1.3 yes yes 1 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 3 2 1 1 3 2 2 3 1 67.544 68.492 2;3 3.6311E-11 19618 Miao_Sh-H9_proteinG_mass3_141226_01 120.32 101.65 84404 4812.2 10125 0 8953.5 8652.8 0 0 7369.8 10094 12337 12304 9754.7 2415 378 2365 22284;22285;22286;22287;22288;22289;22290;22291;22292;22293;22294;22295;22296;22297;22298;22299;22300;22301;22302;22303 24086;24087;24088;24089;24090;24091;24092;24093;24094;24095;24096;24097;24098;24099;24100;24101;24102;24103;24104;24105;24106;24107;24108;24109;24110;24111;24112;24113;24114;24115;24116;24117;24118;24119;24120;24121 24112 36 SEVSSDEDIQFR Unmodified 1410.6263 0.62630252 446 P40939;H0YFD6 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 52.627 53.279 2 0.011804 13665 Miao_Sh-H9_proteinG_mass3_141226_01 60.161 39.373 0 0 0 0 0 0 0 0 0 0 0 0 0 2416 446 2366 22304 24122 24122 1 SFDSASQVPNPAAAAIPR Unmodified 1797.901 0.90096124 184 Q69YQ0;F8WAN1;Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 64.916 67.372 2 0.0083081 18329 Miao_Sh-H9_proteinG_mass3_141226_03 44.998 35.716 0 0 0 0 0 0 0 0 0 0 0 0 0 2417 184 2367 22305 24123 24123 1 SFEGLFYFLGSIVNFSQDPDVHFK Unmodified 2792.3486 0.34861811 535 Q00610;Q00610-2 CLTC Clathrin heavy chain 1 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 122.02 122.34 3 3.4541E-05 32615 Miao_Sh-H9_Flag_mass3_141226_03 55.051 47.469 0 0 0 0 0 0 0 0 0 0 0 0 0 2418 535 2368 22306;22307 24124;24125 24125 2 SFFLQPGEQLEQGIQDVYVLSEQQGLLLR Unmodified 3333.7245 0.72450701 573 Q14764 MVP Major vault protein yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 3 1 1 2 1 1 118.65 117.12 3;4 7.7542E-39 38158 Miao_Sh-H9_proteinG_mass3_141226_03 108.02 96.683 361330 0 0 0 271350 9801 0 0 2489.3 4646.7 0 0 73039 2419 573 2369 22308;22309;22310;22311;22312;22313;22314;22315;22316 24126;24127;24128;24129;24130;24131;24132;24133;24134;24135;24136;24137 24136 11 SFFPELYFNVDNGYLEGLVR Acetyl (Protein N-term) 2420.1689 0.16886283 164 P61421;H3BUQ0;H3BTB5;H3BQB4;H3BSG7;F5GYQ1 ATP6V0D1 V-type proton ATPase subunit d 1 yes no 1 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 120.98 120.98 2 0.00080657 29126 Miao_Sh-c_Flag_mass3_141226_01 51.524 44.206 0 0 0 0 0 0 0 0 0 0 0 0 0 2420 164 2370 22317 24138 24138 1 SFLLDLLNATGK Unmodified 1290.7184 0.71835242 267 O00571;O00571-2 DDX3X ATP-dependent RNA helicase DDX3X yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 105.94 104.24 2 0.0015113 22407 Miao_Sh-c_Flag_mass3_141226_03 75.89 35.163 8862.8 0 0 0 1803 1782.9 0 0 0 2118.8 3158 0 0 2421 267 2371 22318;22319;22320;22321;22322 24139;24140;24141;24142 24139 4 SFSLLQEAIIPYIPTLITQLTQK Unmodified 2616.4778 0.47784137 482 P55060;P55060-4;P55060-3;B4DUC5 CSE1L Exportin-2 yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 122.01 122.49 3 0.00011371 30313 Miao_Sh-c_Flag_mass3_141226_03 52.359 48.827 0 0 0 0 0 0 0 0 0 0 0 0 0 2422 482 2372 22323;22324 24143;24144 24143 2 SFSTALYGESDL Unmodified 1288.5823 0.58231244 283 O43707;O43707-2;F5GXS2;O43707-3;H7C144 ACTN4 Alpha-actinin-4 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 2 1 1 1 81.09 77.982 2 0.00012455 25482 Miao_Sh-H9_proteinG_mass3_141226_01 125.72 111.26 7614.4 0 554.6 0 0 0 0 1604.1 0 707.5 4748.2 0 0 2423 283 2373 22325;22326;22327;22328;22329;22330;22331;22332 24145;24146;24147;24148;24149;24150;24151;24152 24151 8 SFTPDHVVYAR Unmodified 1290.6357 0.63568542 598 Q6NZI2;Q6NZI2-2;Q6NZI2-3 PTRF Polymerase I and transcript release factor yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 2 1 1 1 47.594 49.104 2;3 0.0029135 5349 Miao_Sh-c_Flag_mass3_141226_03 98.737 71.848 8816.5 749.98 118.84 0 489.97 153.01 1030 0 2059.4 2979 1236.3 0 0 2424 598 2374 22333;22334;22335;22336;22337;22338;22339;22340;22341;22342;22343 24153;24154;24155;24156;24157;24158 24153 6 SFVEFILEPLYK Unmodified 1483.7963 0.79626839 244 Q15029;Q15029-2;K7EJ81 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 109.43 109.78 2 0.017972 25122 Miao_Sh-c_Flag_mass3_141226_02 55.261 41.326 0 0 0 0 0 0 0 0 0 0 0 0 0 2425 244 2375 22344 24159 24159 1 SFVLNLGK Unmodified 876.5069 0.50690308 347 P09382 LGALS1 Galectin-1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 1 65.606 66.717 2 0.034141 17178 Miao_Sh-c_proteinG_mass3_141226_03 72.23 39.62 17406 1355.2 0 0 0 0 4593.1 3084.2 3771.4 244.91 0 4357 0 2426 347 2376 22345;22346;22347;22348;22349;22350 24160;24161;24162;24163 24161 4 SGDSEVYQLGDVSQK Unmodified 1610.7424 0.74239491 88 Q04837;C9K0U8;E7EUY5 SSBP1 Single-stranded DNA-binding protein, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 1 54.623 56.668 2;3 0.0013824 14906 Miao_Sh-H9_proteinG_mass3_141226_01 61.444 37.372 4342.8 0 0 277.17 477.17 210.84 0 0 0 0 1824.1 0 1553.6 2427 88 2377 22351;22352;22353;22354;22355;22356 24164;24165 24165 2 SGEDEQQEQTIAEDLVVTK Acetyl (Protein N-term) 2160.007 0.007002036 669 Q9UQ80;F8VR77 PA2G4 Proliferation-associated protein 2G4 yes no 1 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 83.037 70.857 3 5.3189E-05 24865 Miao_Sh-H9_proteinG_mass3_141226_01 58.093 44.108 0 0 0 0 0 0 0 0 0 0 0 0 0 2428 669 2378 22357 24166 24166 1 SGETEDTFIADLVVGLCTGQIK Unmodified 2352.1519 0.15189213 333 P06733;P06733-2;P13929;P09104;F5H0C8;P13929-3;B7Z2X9;P13929-2 ENO1;ENO3;ENO2 Alpha-enolase;Beta-enolase;Gamma-enolase;Enolase yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 113.85 113.85 3 1.2807E-08 26515 Miao_Sh-c_Flag_mass3_141226_01 68.401 60.157 0 0 0 0 0 0 0 0 0 0 0 0 0 2429 333 2379 22358 24167 24167 1 SGFEPASLK Unmodified 934.476 0.47599688 433 P35579;Q5BKV1;B1AH99 MYH9 Myosin-9 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 1 2 2 1 1 1 1 48.522 49.682 2 3.7404E-10 11598 Miao_Sh-H9_proteinG_mass3_141226_02 154.85 106.89 168480 1490.8 223.74 1913 0 1469.1 25844 2122.6 2773.1 2908.1 54790 46587 28362 2430 433 2380 22359;22360;22361;22362;22363;22364;22365;22366;22367;22368;22369;22370;22371;22372;22373 24168;24169;24170;24171;24172;24173;24174;24175;24176;24177;24178;24179;24180;24181;24182;24183;24184;24185;24186;24187;24188;24189 24183 22 SGFSSVSVSR Unmodified 1011.4985 0.49852324 98 P02538;CON__P02538 KRT6A Keratin, type II cytoskeletal 6A yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 1 2 1 1 43.064 45.203 2 1.068E-06 10625 Miao_Sh-H9_proteinG_mass3_141226_01 128.51 67.352 7465 0 0 0 0 0 0 0 0 0 1423.9 2945.3 3095.8 + 2431 98 2381 22374;22375;22376;22377;22378 24190;24191;24192;24193 24191 4 SGFWTIWLWNK Unmodified 1436.7241 0.7241065 167 P19474;F5H012;P19474-2 TRIM21 E3 ubiquitin-protein ligase TRIM21 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 1 113.05 111.44 2 1.5558E-09 28168 Miao_Sh-H9_Flag_mass3_141226_02 141.71 86.927 35230 0 8198.3 8418.7 0 0 0 5502.5 10842 0 0 2268.6 0 2432 167 2382 22379;22380;22381;22382;22383 24194;24195;24196;24197;24198;24199 24199 6 SGGASHSELIHNLR Unmodified 1476.7433 0.74333839 64 P22061;B7Z972;H7BY58;P22061-2;H7C4X2;F8WDT3;F8WAV5;F8WAX2 PCMT1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase;Protein-L-isoaspartate O-methyltransferase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 2 1 1 2 2 1 1 2 2 1 1 40.696 41.842 3;4 0.0084315 8515 Miao_Sh-H9_proteinG_mass3_141226_01 50.088 38.505 7869.7 583 428.52 410.67 526.19 807 1468.4 802.24 945.5 867.15 627.39 403.59 0 2433 64 2383 22384;22385;22386;22387;22388;22389;22390;22391;22392;22393;22394;22395;22396;22397;22398;22399 24200;24201 24201 2 SGGGGGGGLGSGGSIR Unmodified 1231.5905 0.59052614 432 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 2 33.451 35.506 2 1.0125E-05 6826 Miao_Sh-H9_proteinG_mass3_141226_02 82.725 56.269 20295 0 164.75 0 0 981.21 4602.7 0 102.97 0 5297.8 4193.8 4951.4 + 2434 432 2384 22400;22401;22402;22403;22404;22405;22406;22407 24202;24203;24204;24205;24206;24207;24208 24207 7 SGGLAPSK Acetyl (Protein N-term) 757.39702 0.39701828 614 Q8TBF4 ZCRB1 Zinc finger CCHC-type and RNA-binding motif-containing protein 1 yes yes 1 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 24.899 27.694 2 0.02383 2470 Miao_Sh-c_proteinG_mass3_141226_02 55.112 23.808 2130.1 0 0 0 0 425.94 714.24 0 24.967 0 0 0 964.96 2435 614 2385 22408;22409;22410;22411 24209 24209 1 SGGLGGSHALLLLR Unmodified 1349.7779 0.77793298 449 P42704;B8ZZ38;C9JCA9 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 68.531 68.08 3 0.002948 12455 Miao_Sh-H9_Flag_mass3_141226_01 62.088 52.876 0 0 0 0 0 0 0 0 0 0 0 0 0 2436 449 2386 22412 24210 24210 1 SGPFGQIFRPDNFVFGQSGAGNNWAK Unmodified 2797.3361 0.33609636 338;530;566;315 P07437;Q5JP53;Q5ST81;E9PBJ4;P68371;M0QY85;M0QZL7;Q9BVA1;Q13885;P04350;M0R278;M0R1I1 TUBB;TUBB4B;TUBB4A;TUBB2B;TUBB2A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-4A chain no no 0 0 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 5 1 1 95.364 96.128 3;4 1.3076E-33 21464 Miao_Sh-H9_Flag_mass3_141226_01 98.918 74.496 83178 0 0 0 0 3642 0 8044.1 33438 38054 0 0 0 2437 338;530;566;315 2387 22413;22414;22415;22416;22417;22418;22419;22420;22421;22422;22423 24211;24212;24213;24214;24215;24216;24217;24218;24219;24220;24221;24222;24223;24224;24225 24219 15 SGPFGQLFRPDNFIFGQTGAGNNWAK Unmodified 2825.3674 0.36739649 642 Q9BUF5;K7ES63;K7EL29;K7EN98 TUBB6 Tubulin beta-6 chain yes no 0 0 0 0 1 By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 3 1 100.57 100.08 3 3.5471E-19 23139 Miao_Sh-H9_Flag_mass3_141226_01 82.517 68.909 0 0 0 0 0 0 0 0 0 0 0 0 0 2438 642 2388 22424;22425;22426;22427;22428 24226;24227;24228;24229;24230 24228 5 SGSALELSVENVK Unmodified 1331.6933 0.69325988 297;296 O75688-2;C9JIR6;O75688-4;B8ZZF0;O75688-5;O75688 PPM1B Protein phosphatase 1B no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 2 6 2 3 1 1 60.91 61.029 2 1.3046E-167 10221 Miao_Sh-H9_Flag_mass3_141226_01 254.47 214.09 90817 8627.4 18673 275.67 0 0 0 23173 18701 20870 496.9 0 0 2439 297;296 2389 22429;22430;22431;22432;22433;22434;22435;22436;22437;22438;22439;22440;22441;22442;22443;22444 24231;24232;24233;24234;24235;24236;24237;24238;24239;24240;24241;24242;24243;24244;24245;24246;24247;24248;24249;24250;24251;24252;24253;24254;24255 24244 25 SGSTAVGVMISPK Unmodified 1232.6435 0.64347291 297;296 O75688-2;C9JIR6;O75688-4;B8ZZF0;O75688-5;O75688 PPM1B Protein phosphatase 1B no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 2 49.518 50.295 2 0.0035205 7640 Miao_Sh-H9_Flag_mass3_141226_02 69.456 49.797 11228 0 90.853 0 0 0 0 213.2 3350.1 3478 0 4095.6 0 2440 297;296 2390 22445;22446;22447;22448;22449;22450 24256;24257 24256 2 SGSVANNWIEIYNFVQQLAER Unmodified 2437.2026 0.20262257 486 P58335;P58335-4;P58335-3;P58335-2 ANTXR2 Anthrax toxin receptor 2 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 2 1 1 122.43 119.37 3 3.3199E-08 28964 Miao_Sh-c_Flag_mass3_141226_03 67.11 53.743 10043 5058.2 0 557.05 0 0 37.803 0 0 4390.4 0 0 0 2441 486 2391 22451;22452;22453;22454;22455 24258;24259;24260 24259 3 SGTLACTGSLVNNTANDR Unmodified 1849.8588 0.85883843 106 CON__P15636 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 3 1 1 1 2 3 2 51.02 52.97 2;3 2.4568E-16 7452 Miao_Sh-H9_Flag_mass3_141226_03 122.87 103.35 29757 0 0 0 2845.7 1511.7 3567.7 0 4088 4069.8 8106.1 0 5567.5 + 2442 106 2392 22456;22457;22458;22459;22460;22461;22462;22463;22464;22465;22466;22467;22468 24261;24262;24263;24264;24265;24266;24267;24268;24269;24270 24266 10 SGTLACTGSLVNNTANDRK Unmodified 1977.9538 0.95380145 106 CON__P15636 yes yes 0 0 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 2 2 2 1 1 3 1 2 1 1 1 45.991 47.327 3 8.8691E-125 11503 Miao_Sh-H9_proteinG_mass3_141226_01 225.68 167.43 19866 1140.4 859.7 0 1882.2 1715 1145.2 162.24 344.75 3749.9 8304.6 0 561.58 + 2443 106 2393 22469;22470;22471;22472;22473;22474;22475;22476;22477;22478;22479;22480;22481;22482;22483;22484;22485 24271;24272;24273;24274;24275;24276;24277;24278;24279;24280;24281;24282;24283 24281 13 SGVGNIFIK Unmodified 933.52837 0.5283668 359 P11940;P11940-2;E7EQV3;Q4VXU2;E5RGH3;E5RH24;E5RJB9;Q4VY17;Q96DU9;Q96DU9-2 PABPC1;PABPC1L;PABPC5 Polyadenylate-binding protein 1;Polyadenylate-binding protein 1-like;Polyadenylate-binding protein 5 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 63.187 60.664 2 0.019616 16909 Miao_Sh-H9_proteinG_mass3_141226_01 70.816 16.094 9782.8 0 0 0 0 0 6213.8 0 0 0 3323.7 0 245.26 2444 359 2394 22486;22487;22488 24284 24284 1 SGVSLAALK Unmodified 844.50182 0.5018177 378;352;379 P16402;P10412;P16403 HIST1H1D;HIST1H1E;HIST1H1C Histone H1.3;Histone H1.4;Histone H1.2 no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 1 1 1 1 1 2 4 1 53.387 55.038 1;2 2.152E-15 13786 Miao_Sh-H9_proteinG_mass3_141226_02 168.26 75.115 481210 6707.5 7506.6 7027.4 6405 4791.3 11218 11869 15735 15440 146350 145330 102830 2445 378;352;379 2395 22489;22490;22491;22492;22493;22494;22495;22496;22497;22498;22499;22500;22501;22502;22503;22504;22505 24285;24286;24287;24288;24289;24290;24291;24292;24293;24294;24295;24296;24297;24298;24299;24300;24301;24302;24303;24304;24305;24306;24307;24308;24309;24310 24303 22 SGWESYYK Acetyl (Protein N-term) 1060.4502 0.45017606 363 P12956;B1AHC8 XRCC6 X-ray repair cross-complementing protein 6 yes no 1 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 77.441 72.203 2 0.042202 20241 Miao_Sh-H9_proteinG_mass3_141226_02 49.715 21.506 1382.9 0 0 0 0 0 375.67 0 0 0 0 1007.2 0 2446 363 2396 22506;22507 24311 24311 1 SHTILLVQPTK Acetyl (Protein N-term) 1277.7343 0.73433683 191 P84090;G3V279 ERH Enhancer of rudimentary homolog yes no 1 0 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 56.981 60.173 2 3.6282E-62 15937 Miao_Sh-H9_proteinG_mass3_141226_02 205.07 182.06 13271 0 0 1686.7 0 0 3560.6 0 0 0 0 8023.5 0 2447 191 2397 22508;22509;22510;22511;22512;22513 24312;24313;24314;24315;24316;24317 24317 5 SIATLAITTLLK Unmodified 1243.7751 0.77513901 683 Q9Y678;Q9UBF2 COPG1;COPG2 Coatomer subunit gamma-1;Coatomer subunit gamma-2 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 101.85 102.29 2 0.0011189 23651 Miao_Sh-H9_Flag_mass3_141226_01 79.089 69.084 7343.7 1674 1350.1 0 1760.1 0 0 0 0 2559.5 0 0 0 2448 683 2398 22514;22515;22516;22517;22518 24318;24319;24320 24319 3 SICEVLDLER Unmodified 1232.6071 0.60708741 436 P35659;B4DFG0;P35659-2;D6RDA2;H0Y8X0 DEK Protein DEK yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 1 1 73.028 72.391 2 0.049453 21189 Miao_Sh-H9_proteinG_mass3_141226_01 55.314 27.14 11010 0 0 1198 3435.7 0 0 1049 0 408.23 2068.1 2096.9 753.93 2449 436 2399 22519;22520;22521;22522;22523;22524;22525 24321 24321 1 SIDNGIFVQLVQANSPASLVGLR Unmodified 2397.3016 0.30160833 265 O00560;O00560-3;O00560-2;G5EA09 SDCBP Syntenin-1 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 2 1 1 1 1 108.62 109.57 3 2.6189E-23 27406 Miao_Sh-H9_Flag_mass3_141226_02 117.35 108.93 21283 2820.4 4431.1 0 466.26 1527.6 0 4038.7 7999 0 0 0 0 2450 265 2400 22526;22527;22528;22529;22530;22531;22532 24322;24323;24324;24325;24326;24327;24328 24328 7 SIFTPTNQIR Acetyl (Protein N-term) 1217.6404 0.64043645 678 Q9Y3A5;F8WE72 SBDS Ribosome maturation protein SBDS yes no 1 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 67.759 73.222 2 0.0071166 19465 Miao_Sh-c_proteinG_mass3_141226_03 67.334 35.004 0 0 0 0 0 0 0 0 0 0 0 0 0 2451 678 2401 22533 24329 24329 1 SIGVPIK Acetyl (Protein N-term) 754.45889 0.45889025 32 P62318;B4DJP7;H3BT13 SNRPD3 Small nuclear ribonucleoprotein Sm D3 yes no 1 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 54.383 60.147 2 0.027013 14671 Miao_Sh-c_proteinG_mass3_141226_03 67.032 25.53 1083.3 0 0 0 0 0 1083.3 0 0 0 0 0 0 2452 32 2402 22534 24330 24330 1 SILPTAPR Unmodified 853.50215 0.50215205 137 P23588;F8W0K0;F8VYE9;F8VSC7;F8VP89;F8VX11;E7EX17;F8VRU1;B4DS13 EIF4B Eukaryotic translation initiation factor 4B yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 49.99 49.94 2 0.010941 6696 Miao_Sh-H9_Flag_mass3_141226_03 87.181 40.755 0 0 0 0 0 0 0 0 0 0 0 0 0 2453 137 2403 22535 24331 24331 1 SINPDEAVAYGAAVQAAILSGDK Unmodified 2259.1383 0.13829098 356 P11142;E9PKE3;P11142-2;E9PNE6;A8K7Q2 HSPA8 Heat shock cognate 71 kDa protein yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 3 3 3 3 1 3 3 9 3 107.85 102.38 2;3 4.3163E-62 25145 Miao_Sh-H9_Flag_mass3_141226_02 164.27 130.07 383780 44396 26393 30414 19258 0 0 42837 44194 64232 43447 26511 42095 2454 356 2404 22536;22537;22538;22539;22540;22541;22542;22543;22544;22545;22546;22547;22548;22549;22550;22551;22552;22553;22554;22555;22556;22557;22558;22559;22560;22561;22562;22563;22564;22565;22566;22567;22568;22569;22570 24332;24333;24334;24335;24336;24337;24338;24339;24340;24341;24342;24343;24344;24345;24346;24347;24348;24349;24350;24351;24352;24353;24354;24355;24356;24357;24358;24359;24360;24361;24362;24363;24364;24365;24366;24367;24368;24369;24370;24371;24372;24373;24374;24375 24353 44 SINQPVAFVR Unmodified 1129.6244 0.62439245 192 Q9GZT3;H0YJ40;G3V4X6;G3V2S9;Q9GZT3-2;H0YJI1 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 2 1 1 62.172 58.646 2 0.0053399 13500 Miao_Sh-c_proteinG_mass3_141226_03 95.775 47.926 3686.2 0 0 0 0 0 531.71 1059.9 0 0 0 0 2094.6 2455 192 2405 22571;22572;22573;22574 24376;24377;24378 24376 3 SIQADGLVWGSSK Unmodified 1346.683 0.68302954 405 P24534 EEF1B2 Elongation factor 1-beta yes yes 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 2 1 1 1 1 1 1 1 65.474 65.903 2 6.8132E-05 12027 Miao_Sh-H9_Flag_mass3_141226_02 91.812 47.269 18892 0 478.83 1528.8 3450.2 3315.7 443.3 0 0 3204.4 6470.4 0 0 2456 405 2406 22575;22576;22577;22578;22579;22580;22581;22582;22583;22584 24379;24380;24381;24382;24383;24384 24382 6 SIQLDGLVWGASK Unmodified 1372.7351 0.73506511 422 P29692;P29692-2;E9PRY8;P29692-3;E9PK01;E9PQZ1;P29692-4;H0YE72;H0YE58;E9PQC9 EEF1D Elongation factor 1-delta yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 2 1 1 88.636 85.528 2 0.005859 16112 Miao_Sh-c_Flag_mass3_141226_03 63.185 29.31 3900 0 0 938.61 2216.5 0 0 0 0 0 744.9 0 0 2457 422 2407 22585;22586;22587;22588 24385;24386 24385 2 SISISVAR Unmodified 831.48142 0.48141661 314 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 5 1 45.393 47.398 2 3.4126E-36 11600 Miao_Sh-H9_proteinG_mass3_141226_01 193.16 49.929 83561 0 0 621.65 1793.6 484.07 25864 695.03 847.84 0 31350 0 21906 + 2458 314 2408 22589;22590;22591;22592;22593;22594;22595;22596;22597;22598;22599;22600;22601;22602 24387;24388;24389;24390;24391;24392;24393;24394;24395;24396;24397;24398;24399;24400;24401;24402 24393 16 SISLYYTGEK Unmodified 1159.5761 0.57610486 389 P19338;H7BY16 NCL Nucleolin yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 2 1 1 1 1 3 56.515 58.527 2 2.7709E-06 15680 Miao_Sh-H9_proteinG_mass3_141226_01 135.99 69.229 22177 1346.7 0 0 0 1844.3 0 2370.9 0 0 6974.6 8141.8 1498.6 2459 389 2409 22603;22604;22605;22606;22607;22608;22609;22610;22611;22612;22613 24403;24404;24405;24406;24407;24408 24406 6 SIVDYKPNLDLLEQQHQLIQEALIFDNK Unmodified 3323.7402 0.74015708 283 O43707;O43707-2;F5GXS2;O43707-3;H7C144 ACTN4 Alpha-actinin-4 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching 1 1 121.31 110.01 4 8.8418E-15 40028 Miao_Sh-H9_proteinG_mass3_141226_02 73.87 65.258 16387 0 0 0 0 0 7863.6 0 0 0 0 8523.8 0 2460 283 2410 22614;22615 24409;24410 24410 2 SIYYITGESK Unmodified 1159.5761 0.57610486 344;590 Q58FF8;P08238 HSP90AB2P;HSP90AB1 Putative heat shock protein HSP 90-beta 2;Heat shock protein HSP 90-beta no no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 49.943 53.865 2 4.7712E-11 13827 Miao_Sh-H9_proteinG_mass3_141226_01 140.78 100.68 28914 0 0 0 0 216.93 5445.5 0 0 0 0 1579.8 21672 2461 590;344 2411 22616;22617;22618;22619;22620 24411;24412;24413;24414 24414 4 SKAEAESLYQSK Unmodified 1339.662 0.66195975 314 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 1 31.325 33.138 3 0.051626 7316 Miao_Sh-H9_proteinG_mass3_141226_01 48.229 28.914 4200 0 0 61.259 0 0 670.8 0 79.637 0 1567.6 819.01 1001.8 + 2462 314 2412 22621;22622;22623;22624;22625;22626 24415 24415 1 SKVEETTEHLVTK Unmodified 1499.7831 0.78313752 473 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 38.274 39.467 3 0.012881 4120 Miao_Sh-H9_Flag_mass3_141226_01 58.098 35.007 2572.2 186.95 0 167.67 0 0 1372.6 349.71 0 495.32 0 0 0 2463 473 2413 22627;22628;22629;22630;22631 24416 24416 1 SLADELALVDVLEDK Unmodified 1628.8509 0.85088273 336 P07195;A8MW50;C9J7H8;F5H793 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 2 2 2 2 1 1 1 1 1 106.18 104.01 2;3 2.1919E-17 25965 Miao_Sh-c_proteinG_mass3_141226_02 137.17 79.898 30641 0 5581.7 1662.9 2348.8 5870.6 0 1821.5 2359.3 0 9831.8 0 1164.3 2464 336 2414 22632;22633;22634;22635;22636;22637;22638;22639;22640;22641;22642;22643;22644 24417;24418;24419;24420;24421;24422;24423;24424;24425;24426;24427;24428;24429;24430;24431;24432 24421 16 SLAGSSGPGASSGTSGDHGELVVR Unmodified 2184.0407 0.040702201 422 P29692;P29692-2;E9PRY8;E9PK01;E9PMW7;E9PPR1;E9PL12;E9PQ49;E9PI39;E9PIZ1;H0YCK7 EEF1D Elongation factor 1-delta yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 1 1 1 1 1 1 1 2 47.456 47.899 3 1.3557E-56 11178 Miao_Sh-H9_proteinG_mass3_141226_02 149.32 123.95 11371 0 1006.7 1377.4 0 0 0 2632.2 2550.3 2365.7 0 1438.2 0 2465 422 2415 22645;22646;22647;22648;22649;22650;22651;22652;22653;22654;22655 24433;24434;24435;24436;24437;24438;24439;24440;24441;24442;24443;24444 24444 12 SLDITTSTTAYFPPGATLNNK Unmodified 2211.1059 0.10592822 609 Q8IXB1;Q8IXB1-3;H7C1G0 DNAJC10 DnaJ homolog subfamily C member 10 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 1 74.432 72.652 3 0.0013306 27323 Miao_Sh-H9_proteinG_mass3_141226_03 50.226 40.689 213730 0 102420 104160 634.4 755.63 0 3158.9 0 0 0 0 2607.3 2466 609 2416 22656;22657;22658;22659;22660;22661;22662;22663 24445;24446;24447 24447 3 SLDLDSIIAEVK Unmodified 1301.7078 0.70784731 314 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 no no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 2 3 2 2 1 1 3 6 4 103.75 97.77 2;3 4.039E-200 36598 Miao_Sh-H9_proteinG_mass3_141226_02 260.57 166.91 532960 8554 0 859.66 104270 62757 86157 15015 0 12556 156060 10863 75868 + 2467 314 2417 22664;22665;22666;22667;22668;22669;22670;22671;22672;22673;22674;22675;22676;22677;22678;22679;22680;22681;22682;22683;22684;22685;22686;22687;22688;22689 24448;24449;24450;24451;24452;24453;24454;24455;24456;24457;24458;24459;24460;24461;24462;24463;24464;24465;24466;24467;24468;24469;24470;24471;24472;24473;24474;24475;24476;24477;24478;24479;24480;24481;24482;24483;24484;24485;24486;24487;24488;24489;24490;24491;24492;24493;24494;24495;24496;24497;24498;24499;24500;24501;24502;24503;24504;24505;24506;24507;24508 24490 61 SLEAEILQLQEELASSER Unmodified 2044.0324 0.032428926 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 1 1 1 1 2 1 3 5 2 111.87 107.88 2;3 6.3948E-58 27550 Miao_Sh-H9_Flag_mass3_141226_03 188.82 166.76 130930 4623 8683.3 8657.1 448.96 14742 12925 6032.3 0 8338.9 35780 22260 8440.2 2468 434 2418 22690;22691;22692;22693;22694;22695;22696;22697;22698;22699;22700;22701;22702;22703;22704;22705;22706;22707;22708;22709;22710;22711;22712;22713;22714;22715 24509;24510;24511;24512;24513;24514;24515;24516;24517;24518;24519;24520;24521;24522;24523;24524;24525;24526;24527;24528;24529;24530;24531;24532;24533;24534;24535;24536;24537;24538;24539 24529 31 SLEEIYLFSLPIK Unmodified 1550.8596 0.85959692 375 P15880;H0YEN5;E9PMM9;E9PQD7;E9PPT0;H3BNG3;H0YE27 RPS2 40S ribosomal protein S2 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 2 2 1 1 2 2 2 2 3 1 109.01 105.51 2;3 3.9902E-33 38236 Miao_Sh-c_proteinG_mass3_141226_03 134.68 103.61 126540 9524.2 13838 8393.8 2856.9 1896.3 12643 11362 11913 12136 29052 12925 0 2469 375 2419 22716;22717;22718;22719;22720;22721;22722;22723;22724;22725;22726;22727;22728;22729;22730;22731;22732;22733;22734;22735 24540;24541;24542;24543;24544;24545;24546;24547;24548;24549;24550;24551;24552;24553;24554;24555;24556;24557;24558;24559;24560;24561;24562;24563;24564;24565;24566;24567;24568;24569;24570;24571;24572;24573 24552 33 SLEGTEAQVFK Unmodified 1207.6085 0.60846762 556 Q13045;Q13045-2;Q13045-3 FLII Protein flightless-1 homolog yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 3 59.81 58.369 2 0.0038845 15020 Miao_Sh-H9_proteinG_mass3_141226_02 100.82 66.733 13673 0 0 1034.4 608.27 0 0 1546.4 1208.9 0 5969.2 0 3305.5 2470 556 2420 22736;22737;22738;22739;22740;22741;22742;22743;22744;22745 24574;24575;24576;24577 24576 4 SLEQNIQLPAALLSR Unmodified 1651.9257 0.92571943 430 P33993;P33993-3 MCM7 DNA replication licensing factor MCM7 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 90.165 89.839 3 0.018775 20240 Miao_Sh-H9_Flag_mass3_141226_02 42.314 23.492 2440.9 0 0 0 0 0 0 0 1275.2 1165.7 0 0 0 2471 430 2421 22746;22747 24578 24578 1 SLESINSR Unmodified 904.46141 0.46140945 122 P62888;E5RI99;E5RJH3 RPL30 60S ribosomal protein L30 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 1 35.019 35.979 2 0.0022883 3484 Miao_Sh-c_proteinG_mass3_141226_01 116.05 55.14 5142 523.38 614.25 401.48 516.87 623.45 0 0 615.08 0 1847.5 0 0 2472 122 2422 22748;22749;22750;22751;22752;22753;22754;22755 24579;24580;24581;24582;24583;24584;24585;24586 24583 8 SLETENAGLR Unmodified 1088.5462 0.54620171 312 P02545;P02545-2;P02545-6;P02545-3 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 38.289 40.946 2 0.030133 8642 Miao_Sh-H9_proteinG_mass3_141226_03 58.699 23.404 0 0 0 0 0 0 0 0 0 0 0 0 0 2473 312 2423 22756 24587 24587 1 SLFSSIGEVESAK Unmodified 1352.6824 0.68236084 46 Q15717;B4DVB8;M0QZR9 ELAVL1 ELAV-like protein 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 1 1 2 1 1 1 2 65.35 60.883 2;3 0.0016957 21639 Miao_Sh-H9_proteinG_mass3_141226_03 66.393 51.021 11309 893.59 0 0 429 1405.7 1915.9 146.9 0 0 2786.3 0 3731.8 2474 46 2424 22757;22758;22759;22760;22761;22762;22763;22764;22765 24588;24589;24590;24591 24591 4 SLFVQELLLSTLVR Unmodified 1616.9501 0.95014327 662 Q9P0J7 KCMF1 E3 ubiquitin-protein ligase KCMF1 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 2 1 2 1 116.45 116.7 2;3 8.5106E-05 27526 Miao_Sh-c_Flag_mass3_141226_02 101.72 76.849 13688 1878.2 2349.8 0 1832.4 0 0 0 5280.3 2347 0 0 0 2475 662 2425 22766;22767;22768;22769;22770;22771;22772;22773;22774 24592;24593;24594;24595;24596;24597 24593 6 SLGPPQGEEDSVPR Unmodified 1466.7001 0.70013617 533 P78527;E7EUY0;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 45.506 48.564 2 0.057132 11098 Miao_Sh-H9_proteinG_mass3_141226_03 40.278 21.178 0 0 0 0 0 0 0 0 0 0 0 0 0 2476 533 2426 22775 24598 24598 1 SLGSVQAPSYGAR Unmodified 1291.6521 0.65206377 178 P05783;F8VZY9 KRT18 Keratin, type I cytoskeletal 18 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 2 1 47.178 49.734 2 2.8371E-05 10698 Miao_Sh-c_proteinG_mass3_141226_03 112.42 59.823 5790.5 0 0 0 246.03 0 4221.2 0 0 1323.3 0 0 0 2477 178 2427 22776;22777;22778;22779;22780;22781 24599;24600;24601;24602;24603 24599 5 SLGTADVHFER Unmodified 1230.5993 0.59929991 139 Q86V81;E9PB61 ALYREF THO complex subunit 4 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 3 1 3 3 2 2 4 12 21 61.948 58.537 2;3 1.1298E-21 12297 Miao_Sh-H9_proteinG_mass3_141226_01 160.91 123.77 97871 2249.2 2683.2 2558.7 0 360.99 6168.8 4691 3585.1 0 38567 6030 30977 2478 139 2428 22782;22783;22784;22785;22786;22787;22788;22789;22790;22791;22792;22793;22794;22795;22796;22797;22798;22799;22800;22801;22802;22803;22804;22805;22806;22807;22808;22809;22810;22811;22812;22813;22814;22815;22816;22817;22818;22819;22820;22821;22822;22823;22824;22825;22826;22827;22828;22829;22830;22831;22832;22833;22834;22835 24604;24605;24606;24607;24608;24609;24610;24611;24612;24613;24614;24615;24616;24617;24618;24619;24620;24621;24622;24623;24624;24625;24626;24627;24628;24629;24630;24631;24632;24633;24634;24635;24636;24637;24638;24639;24640;24641;24642;24643;24644;24645;24646;24647;24648;24649;24650;24651;24652;24653;24654;24655;24656;24657;24658;24659;24660;24661;24662;24663;24664;24665;24666;24667;24668;24669 24622 65 SLGYAYVNFQQPADAER Unmodified 1927.9064 0.90644055 359 P11940;P11940-2;E7EQV3;E7ERJ7;H0YBN4;E5RGH3;E5RH24;E5RJB9;E5RHG7 PABPC1 Polyadenylate-binding protein 1 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 70.959 71.66 2 0.00031677 20796 Miao_Sh-H9_proteinG_mass3_141226_01 68.494 56.851 3076.8 0 0 0 1332.7 0 0 0 0 0 1744.1 0 0 2479 359 2429 22836;22837;22838 24670;24671 24670 2 SLHTLFGDELCK Unmodified 1418.6864 0.68640036 99 CON__P02769 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 2 1 87.366 86.283 3 0.004237 12101 Miao_Sh-H9_Flag_mass3_141226_01 65.842 44.272 5932.2 0 0 758.82 1757.4 382.7 0 1708.3 0 0 1324.9 0 0 + 2480 99 2430 22839;22840;22841;22842;22843;22844 24672;24673 24672 2 SLIGVEYKPVSATGAEDK Unmodified 1862.9626 0.96255845 340 P07814;V9GYZ6 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 55.921 58.427 3 0.028401 15133 Miao_Sh-H9_proteinG_mass3_141226_02 36.127 10.144 0 0 0 0 0 0 0 0 0 0 0 0 0 2481 340 2431 22845 24674 24674 1 SLLEGEGSSGGGGR Unmodified 1261.5899 0.58985744 104 P13645;CON__P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 2 1 1 1 2 38.11 39.582 2 1.1964E-06 8039 Miao_Sh-H9_proteinG_mass3_141226_03 119.87 75.518 18030 253.53 326.91 0 0 498.95 5132.5 237.95 283.46 0 6387.8 4908.8 0 + 2482 104 2432 22846;22847;22848;22849;22850;22851;22852;22853;22854;22855;22856;22857;22858 24675;24676;24677;24678;24679;24680;24681;24682;24683;24684;24685;24686;24687;24688;24689;24690 24689 16 SLLIDFFR Unmodified 1009.5597 0.55966693 597 Q9H7B2;Q5VXN0 RPF2 Ribosome production factor 2 homolog yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 100.09 97.91 2 0.032223 23812 Miao_Sh-c_proteinG_mass3_141226_01 73.26 37.965 2867.3 0 0 0 1290.2 140.06 480.53 956.51 0 0 0 0 0 2483 597 2433 22859;22860;22861;22862 24691 24691 1 SLLLLAYLIR Unmodified 1173.7485 0.74853033 571 Q14677;Q14677-2;Q14677-3 CLINT1 Clathrin interactor 1 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 2 1 1 1 1 112.59 112.76 2 3.6704E-24 25879 Miao_Sh-c_Flag_mass3_141226_01 155.84 141.16 10705 0 0 3342.9 0 0 0 1684.7 2659.7 3017.9 0 0 0 2484 571 2434 22863;22864;22865;22866;22867;22868;22869 24692;24693;24694;24695;24696;24697;24698;24699 24692 8 SLLNKPK Acetyl (Protein N-term) 840.5069 0.50690308 507 P62316;K7ERG4 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes no 1 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 2 38.278 40.295 2 0.044218 7701 Miao_Sh-c_proteinG_mass3_141226_03 74.439 8.7665 16989 274.5 333.16 0 220.26 0 4925.5 0 0 0 3816.5 3552.6 3866.1 2485 507 2435 22870;22871;22872;22873;22874;22875;22876;22877 24700;24701 24700 2 SLLQALNEVK Unmodified 1113.6394 0.63937381 568 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 76.486 75.934 2 0.0045699 15158 Miao_Sh-H9_Flag_mass3_141226_01 88.155 31.006 0 0 0 0 0 0 0 0 0 0 0 0 0 2486 568 2436 22878 24702 24702 1 SLLSILQR Unmodified 928.57057 0.57056597 600 Q7Z6Z7;Q7Z6Z7-2;Q7Z6Z7-3;H0Y5W0;H0Y659 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 82.012 80.638 2 0.0078384 17342 Miao_Sh-H9_Flag_mass3_141226_02 95.352 17.612 3797.1 0 886.81 548.24 0 508.96 0 0 1501.3 0 351.83 0 0 2487 600 2437 22879;22880;22881;22882;22883;22884 24703;24704 24703 2 SLLVIPNTLAVNAAQDSTDLVAK Unmodified 2352.29 0.2900406 386 P17987;F5H282;E7EQR6 TCP1 T-complex protein 1 subunit alpha yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 105.33 97.485 3 3.9352E-08 35555 Miao_Sh-H9_proteinG_mass3_141226_01 62.193 48.768 15706 1453.6 0 0 0 0 0 3364.2 0 0 5038.7 2468.7 3380.4 2488 386 2438 22885;22886;22887;22888;22889;22890 24705;24706;24707;24708 24706 3 SLNNQFASFIDK Unmodified 1382.683 0.68302954 314 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 no no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 4 2 8 2 3 2 6 5 6 81.259 78.338 2;3 3.7274E-68 30642 Miao_Sh-H9_proteinG_mass3_141226_02 199.41 133.15 596380 15133 2288.3 9109.8 99424 4106.8 116010 32981 21645 25813 103580 145980 20305 + 2489 314 2439 22891;22892;22893;22894;22895;22896;22897;22898;22899;22900;22901;22902;22903;22904;22905;22906;22907;22908;22909;22910;22911;22912;22913;22914;22915;22916;22917;22918;22919;22920;22921;22922;22923;22924;22925;22926;22927;22928;22929;22930;22931;22932 24709;24710;24711;24712;24713;24714;24715;24716;24717;24718;24719;24720;24721;24722;24723;24724;24725;24726;24727;24728;24729;24730;24731;24732;24733;24734;24735;24736;24737;24738;24739;24740;24741;24742;24743;24744;24745;24746;24747;24748;24749;24750;24751;24752;24753;24754;24755;24756;24757;24758;24759;24760;24761;24762 24750 54 SLNVESNFITGVGILALIDALR Unmodified 2314.2896 0.28964667 657 Q9NYL9;H0YKU1;H0YNJ8 TMOD3 Tropomodulin-3 yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching 1 3 2 1 120.16 120.74 2;3 1.292E-13 33766 Miao_Sh-c_proteinG_mass3_141226_01 94.384 87.59 20762 0 0 4010.7 16751 0 0 0 0 0 0 0 0 2490 657 2440 22933;22934;22935;22936;22937;22938;22939 24763;24764;24765;24766;24767;24768;24769;24770;24771;24772 24767 10 SLQPLAPR Unmodified 880.51305 0.51305109 573 Q14764 MVP Major vault protein yes yes 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 40.302 42.892 2 0.00018778 10042 Miao_Sh-H9_proteinG_mass3_141226_01 138.54 73.293 177450 0 0 0 0 2476 56265 0 72.691 0 41468 41719 35453 2491 573 2441 22940;22941;22942;22943;22944;22945 24773;24774;24775;24776;24777;24778;24779;24780;24781;24782;24783;24784;24785 24778 13 SLQSVAEER Unmodified 1017.5091 0.50908792 128 P61313;E7EQV9;E7EX53;P61313-2 RPL15 60S ribosomal protein L15;Ribosomal protein L15 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 2 1 2 1 1 1 1 1 39.838 41.677 2 9.0765E-15 9035 Miao_Sh-H9_proteinG_mass3_141226_02 163.43 110.84 24198 351.68 281.49 384.84 498.75 710.91 4762.5 317.44 0 0 5988.3 5030.5 5871.2 2492 128 2442 22946;22947;22948;22949;22950;22951;22952;22953;22954;22955;22956;22957 24786;24787;24788;24789;24790;24791;24792;24793;24794;24795;24796;24797;24798;24799;24800 24797 15 SLSALGNVISALAEGSTYVPYR Unmodified 2267.1798 0.17976186 428 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 113.7 113.35 3 0.0006407 27897 Miao_Sh-H9_Flag_mass3_141226_01 50.202 44.192 0 0 0 0 0 0 0 0 0 0 0 0 0 2493 428 2443 22958 24801 24801 1 SLTNDWEDHLAVK Unmodified 1526.7365 0.73652168 344;341 P07900;P07900-2;Q86U12;P08238 HSP90AA1;HSP90AB1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 3 4 2 1 1 1 1 1 65.423 65.917 2;3 1.1037E-05 11977 Miao_Sh-H9_Flag_mass3_141226_03 111.79 77.529 58634 4931.2 4605.9 3603.4 6462.7 5279.8 2966.6 4856 10257 8836.2 2964.3 1184.4 2686.9 2494 341;344 2444 22959;22960;22961;22962;22963;22964;22965;22966;22967;22968;22969;22970;22971;22972;22973;22974;22975;22976 24802;24803;24804;24805;24806;24807;24808;24809;24810;24811;24812;24813;24814;24815;24816;24817;24818;24819;24820;24821;24822;24823;24824 24820 23 SLTTTLVK Unmodified 861.51713 0.51713341 110 CON__Q05B55 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 45.368 47.189 2 0.0048771 11507 Miao_Sh-H9_proteinG_mass3_141226_01 103.87 45.678 29252 0 0 0 684.03 0 0 0 0 0 16292 0 12276 + 2495 110 2445 22977;22978;22979;22980 24825;24826;24827 24825 3 SLTYLSILR Unmodified 1064.623 0.62299547 215 P09661;H0YMA0;H0YKK0 SNRPA1 U2 small nuclear ribonucleoprotein A' yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 1 87.254 84.948 2 0.021258 17967 Miao_Sh-H9_Flag_mass3_141226_02 70.028 48.728 8771.2 0 1563.9 0 2160.3 0 0 0 1740 1602.1 1704.9 0 0 2496 215 2446 22981;22982;22983;22984;22985 24828;24829;24830 24828 3 SLVIPEK Acetyl (Protein N-term) 826.48002 0.48001963 503 P62269 RPS18 40S ribosomal protein S18 yes yes 1 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 2 2 1 3 2 58.381 61.038 1;2 0.0014591 15476 Miao_Sh-H9_proteinG_mass3_141226_03 124.83 53.922 51701 0 0 112.9 0 0 17343 2747.2 0 0 10487 9903 11108 2497 503 2447 22986;22987;22988;22989;22990;22991;22992;22993;22994;22995;22996 24831;24832;24833;24834;24835;24836;24837;24838;24839;24840;24841 24841 10 SLVNLGGSK Unmodified 873.49198 0.4919813 314 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 1 1 44.658 46.835 2 1.3509E-14 9822 Miao_Sh-c_proteinG_mass3_141226_03 160.33 71.039 88369 419.87 357.51 383.15 1620.8 0 35787 0 0 0 0 26717 23084 + 2498 314 2448 22997;22998;22999;23000;23001;23002;23003;23004;23005 24842;24843;24844;24845;24846;24847;24848;24849;24850 24844 9 SLYALFSQFGHVVDIVALK Unmodified 2106.1514 0.15136227 345 P08579 SNRPB2 U2 small nuclear ribonucleoprotein B'' yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 115.34 115.67 3 4.7122E-09 27460 Miao_Sh-c_Flag_mass3_141226_03 87.676 69.957 12328 0 5363.4 4747.3 0 0 0 2217.1 0 0 0 0 0 2499 345 2449 23006;23007;23008;23009;23010 24851;24852;24853;24854 24853 4 SLYASSPGGVYATR Unmodified 1427.7045 0.70449327 346 P08670;B0YJC4 VIM Vimentin yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 1 1 1 1 1 52.299 53.208 2 6.4698E-20 6753 Miao_Sh-c_proteinG_mass3_141226_02 145.41 108.06 50508 3238 2878.9 0 0 0 0 6303 0 4796.2 11670 10791 10831 2500 346 2450 23011;23012;23013;23014;23015;23016;23017;23018;23019;23020 24855;24856;24857;24858;24859;24860;24861;24862;24863;24864;24865;24866;24867 24859 13 SLYNLGGSK Unmodified 937.4869 0.48689592 105 P13647;CON__P13647;F8VV57 KRT5 Keratin, type II cytoskeletal 5 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 45.381 48.439 2 0.039909 11055 Miao_Sh-H9_proteinG_mass3_141226_03 58.592 17.09 0 0 0 0 0 0 0 0 0 0 0 0 0 + 2501 105 2451 23021 24868 24868 1 SLYPSLEDLK Acetyl (Protein N-term) 1205.618 0.61796967 265 O00560;O00560-3;O00560-2;B4DHN5;E9PBU7 SDCBP Syntenin-1 yes no 1 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 2 1 88.206 87.922 2 0.0020896 17253 Miao_Sh-c_Flag_mass3_141226_03 90.827 57.449 9515 0 2397.3 0 0 0 0 3762.1 0 3355.6 0 0 0 2502 265 2452 23022;23023;23024;23025;23026;23027 24869;24870;24871;24872;24873;24874;24875;24876 24871 7 SLYQSAGVAPESFEYIEAHGTGTK Unmodified 2541.2023 0.2023478 464 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 75.559 75.534 3 0.0027763 13631 Miao_Sh-c_Flag_mass3_141226_01 40.086 31.41 0 0 0 0 0 0 0 0 0 0 0 0 0 2503 464 2453 23028;23029 24877;24878 24877 2 SLYYYIQQDTK Unmodified 1420.6874 0.68744622 337 P07355;P07355-2;A6NMY6 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 67.849 67.799 2 0.0031069 12530 Miao_Sh-H9_Flag_mass3_141226_03 80.17 56.446 0 0 0 0 0 0 0 0 0 0 0 0 0 2504 337 2454 23030 24879 24879 1 SNLAYDIVQLPTGLTGIK Unmodified 1902.0462 0.046228496 431 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 97.761 98.413 3 0.0020239 20970 Miao_Sh-c_Flag_mass3_141226_03 48.376 38.532 0 0 0 0 0 0 0 0 0 0 0 0 0 2505 431 2455 23031;23032 24880;24881 24881 2 SNLGSVVLQLK Unmodified 1156.6816 0.68157298 279 O43143 DHX15 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 71.238 71.125 2 0.010027 21313 Miao_Sh-H9_proteinG_mass3_141226_01 71.176 49.183 3872.1 1021 0 0 0 0 0 232.75 0 1021 1597.5 0 0 2506 279 2456 23033;23034;23035;23036 24882 24882 1 SNSFFEGVDWEHIR Unmodified 1721.7798 0.77978347 577 Q15208 STK38 Serine/threonine-protein kinase 38 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 2 2 2 2 2 1 88.298 81.539 3 8.2555E-06 17961 Miao_Sh-H9_Flag_mass3_141226_03 111.38 89.77 11096 3178.8 0 0 0 0 1134.2 5749.5 0 0 1034 0 0 2507 577 2457 23037;23038;23039;23040;23041;23042;23043;23044;23045;23046;23047;23048;23049 24883;24884;24885;24886;24887;24888;24889;24890;24891;24892 24891 10 SNVKKHMQTHK Oxidation (M);3 GlyGly (K) 1694.8271 0.82708479 152 Q9BYN7;E9PN62;Q9BYN7-2 ZNF341 Zinc finger protein 341 yes no 0 3 1 0 2 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 2 2 1 3 61.111 62.113 2 0.0088956 15632 Miao_Sh-c_proteinG_mass3_141226_03 58.699 39.877 471040 0 0 0 194900 0 275660 0 0 0 0 481.46 0 2508 152 2458 23050;23051;23052;23053;23054;23055;23056;23057 24893;24894;24895;24896;24897;24898;24899 24896 17 7 SNVSDAVAQSTR Unmodified 1233.5949 0.59494282 487 P60174;P60174-4;P60174-1 TPI1 Triosephosphate isomerase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 35.87 38.439 2 0.055333 8542 Miao_Sh-H9_proteinG_mass3_141226_01 47.774 37.022 2058.9 0 0 0 181.71 0 575.1 0 0 0 639.6 662.48 0 2509 487 2459 23058;23059;23060;23061 24900 24900 1 SPAGLQVLNDYLADK Unmodified 1602.8253 0.82533668 405 P24534;F8WF65;F2Z2G2;C9JZW3 EEF1B2 Elongation factor 1-beta yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 2 1 2 1 1 2 1 2 1 1 91.659 88.79 2;3 5.9181E-16 17496 Miao_Sh-c_Flag_mass3_141226_02 98.817 71.173 39260 0 4714.8 0 6305.8 259.39 3915.2 6272.2 3049.9 6663.6 4252.3 0 3826.7 2510 405 2460 23062;23063;23064;23065;23066;23067;23068;23069;23070;23071;23072;23073;23074;23075;23076 24901;24902;24903;24904;24905;24906;24907;24908;24909;24910;24911;24912;24913;24914;24915 24902 14 SPASDTYIVFGEAK Unmodified 1483.7195 0.71947463 138 E9PAV3;F8W1N5;F8VZJ2;F8VNW4;F8W0W4;H0YHX9;Q13765;E9PAV3-2 NACA Nascent polypeptide-associated complex subunit alpha, muscle-specific form;Nascent polypeptide-associated complex subunit alpha yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 2 1 1 1 1 1 66.251 67.611 2;3 0.0063471 17873 Miao_Sh-c_proteinG_mass3_141226_03 57.288 48.973 4848 0 271.78 412.4 0 0 901.88 0 715.28 654.75 1004.6 604.41 282.82 2511 138 2461 23077;23078;23079;23080;23081;23082;23083;23084;23085 24916;24917 24916 2 SPEVLLGSAR Unmodified 1027.5662 0.56620887 330 P06493;E5RIU6;P06493-2 CDK1 Cyclin-dependent kinase 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 50.445 51.297 2 0.039002 12798 Miao_Sh-H9_proteinG_mass3_141226_01 54.343 5.2851 0 0 0 0 0 0 0 0 0 0 0 0 0 2512 330 2462 23086 24918 24918 1 SPILVATAVAAR Unmodified 1167.6976 0.69755739 267 O00571;O00571-2;O15523;B4DXX7 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 60.638 61.766 2 0.0011715 16444 Miao_Sh-H9_proteinG_mass3_141226_02 77.185 49.703 0 0 0 0 0 0 0 0 0 0 0 0 0 2513 267 2463 23087;23088;23089;23090 24919;24920;24921;24922 24922 4 SPLQSVVVR Unmodified 983.57638 0.57637963 677 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 48.357 51.415 2 0.0093283 12002 Miao_Sh-H9_proteinG_mass3_141226_03 80.755 31.658 0 0 0 0 0 0 0 0 0 0 0 0 0 2514 677 2464 23091 24923 24923 1 SPNEEYTWEEDPLAGIIPR Unmodified 2215.0433 0.043327963 473 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 107.45 98.432 3 8.8744E-06 23123 Miao_Sh-H9_Flag_mass3_141226_01 68.088 63.541 4244.8 0 0 0 0 0 0 2726.9 0 0 0 0 1517.9 2515 473 2465 23092;23093 24924 24924 1 SPNELVDDLFK Unmodified 1275.6347 0.63468237 157 Q9UNZ2;F2Z2K0;J3QK90;Q9UNZ2-5;Q9UNZ2-4 NSFL1C NSFL1 cofactor p47 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 87.523 86.771 2 0.033607 18591 Miao_Sh-H9_Flag_mass3_141226_01 51.135 31.879 0 0 0 0 0 0 0 0 0 0 0 0 0 2516 157 2466 23094 24925 24925 1 SPPSVTLFPPSTEELNGNK Unmodified 2013.0055 0.0054858935 111 CON__Q1RMN8 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 4 9 5 7 3 8 80.33 75.724 2;3 3.2506E-12 26776 Miao_Sh-H9_proteinG_mass3_141226_02 116.83 98.51 62366 0 1297.6 0 10564 13470 6593.9 0 0 0 14708 12250 3482.2 + 2517 111 2467 23095;23096;23097;23098;23099;23100;23101;23102;23103;23104;23105;23106;23107;23108;23109;23110;23111;23112;23113;23114;23115;23116;23117;23118;23119;23120;23121;23122;23123;23124;23125;23126;23127;23128;23129;23130;23131 24926;24927;24928;24929;24930;24931;24932;24933;24934;24935;24936;24937;24938;24939;24940;24941;24942;24943;24944;24945;24946;24947;24948;24949;24950;24951;24952;24953;24954;24955;24956;24957;24958;24959;24960;24961;24962;24963;24964;24965;24966;24967;24968;24969;24970;24971;24972 24954 47 SPVDVLQIFR Unmodified 1172.6554 0.65535823 664 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 2 1 1 106.68 98.099 2 1.9344E-33 20973 Miao_Sh-c_proteinG_mass3_141226_02 181.87 143.09 20971 0 0 0 0 3885.8 2041.9 0 0 837.05 7211.6 5574.7 1419.4 2518 664 2468 23132;23133;23134;23135;23136;23137;23138 24973;24974;24975;24976;24977;24978;24979 24974 7 SPVYLTVLK Unmodified 1018.6063 0.60628277 149 P55786;E9PLK3;B7Z463 NPEPPS Puromycin-sensitive aminopeptidase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 2 1 1 67.554 68.782 2 0.020561 19649 Miao_Sh-H9_proteinG_mass3_141226_01 70.363 33.018 2130.4 0 0 0 0 0 0 0 0 0 1279.7 850.63 0 2519 149 2469 23139;23140;23141;23142 24980;24981;24982 24982 3 SPYLYPLYGLGELPQGFAR Unmodified 2140.0993 0.099326699 135 P50395;E7EU23;P50395-2;P31150;Q5SX91;Q5SX87 GDI2;GDI1 Rab GDP dissociation inhibitor beta;Rab GDP dissociation inhibitor alpha yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 103.72 102.76 3 4.3199E-06 24102 Miao_Sh-H9_Flag_mass3_141226_01 67.418 46.894 0 0 0 0 0 0 0 0 0 0 0 0 0 2520 135 2470 23143 24983 24983 1 SPYQEFTDHLVK Unmodified 1462.7092 0.70924429 375 P15880;H0YEN5;E9PQD7 RPS2 40S ribosomal protein S2 yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 2 2 1 4 1 1 2 1 3 75.836 73.117 2;3 0.0007683 18991 Miao_Sh-H9_proteinG_mass3_141226_01 91.712 63.507 55429 2522.5 0 2531.2 10609 7170.2 12019 3531.8 0 429.51 7182.6 4522.9 4910.1 2521 375 2471 23144;23145;23146;23147;23148;23149;23150;23151;23152;23153;23154;23155;23156;23157;23158;23159;23160;23161 24984;24985;24986;24987;24988;24989;24990;24991;24992;24993;24994;24995;24996;24997;24998;24999;25000;25001 24996 18 SQDAEVGDGTTSVTLLAAEFLK Unmodified 2251.122 0.12197221 638 Q99832;Q99832-3;F8WAM2 CCT7 T-complex protein 1 subunit eta yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 106.48 106.46 3 1.1621E-15 23647 Miao_Sh-c_Flag_mass3_141226_01 87.468 74.049 0 0 0 0 0 0 0 0 0 0 0 0 0 2522 638 2472 23162;23163 25002;25003 25002 2 SQDIYLR Unmodified 893.46068 0.46068117 190 Q07020;G3V203;J3QQ67;F8VYV2;F8VXR6 RPL18 60S ribosomal protein L18 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 1 1 1 42.937 44.046 2 0.028124 10492 Miao_Sh-H9_proteinG_mass3_141226_01 84.244 39.552 10500 355.67 305.59 259.83 216.96 0 0 81.638 0 0 3825 2712.8 2742.2 2523 190 2473 23164;23165;23166;23167;23168;23169;23170;23171 25004 25004 1 SQIFSTASDNQPTVTIK Unmodified 1835.9265 0.92650729 355 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 4 2 2 1 2 2 3 2 5 3 61.63 62.47 2;3 1.4094E-55 10419 Miao_Sh-H9_Flag_mass3_141226_01 184.5 142.67 312230 18702 26649 28180 11832 0 12757 50676 55832 53966 31237 13755 8646.9 2524 355 2474 23172;23173;23174;23175;23176;23177;23178;23179;23180;23181;23182;23183;23184;23185;23186;23187;23188;23189;23190;23191;23192;23193;23194;23195;23196;23197;23198;23199;23200;23201;23202;23203;23204;23205 25005;25006;25007;25008;25009;25010;25011;25012;25013;25014;25015;25016;25017;25018;25019;25020;25021;25022;25023;25024;25025;25026;25027;25028;25029;25030;25031;25032;25033;25034;25035;25036;25037;25038;25039;25040;25041;25042;25043;25044;25045;25046;25047;25048;25049;25050;25051;25052;25053;25054;25055;25056;25057;25058;25059;25060;25061;25062;25063;25064;25065;25066;25067;25068;25069;25070;25071;25072;25073;25074;25075;25076;25077;25078 25033 74 SQIHDIVLVGGSTR Unmodified 1480.7998 0.79979063 356 P11142;E9PKE3;P11142-2;E9PNE6;A8K7Q2;E9PN89 HSPA8 Heat shock cognate 71 kDa protein yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 3 2 3 3 2 3 2 4 53.412 55.037 2;3 1.7331E-45 7807 Miao_Sh-H9_Flag_mass3_141226_01 184.01 157 191200 10260 9755.7 0 9981.6 8803.2 19926 19428 24861 25945 29232 14475 18528 2525 356 2475 23206;23207;23208;23209;23210;23211;23212;23213;23214;23215;23216;23217;23218;23219;23220;23221;23222;23223;23224;23225;23226;23227;23228;23229;23230;23231;23232;23233 25079;25080;25081;25082;25083;25084;25085;25086;25087;25088;25089;25090;25091;25092;25093;25094;25095;25096;25097;25098;25099;25100;25101;25102;25103;25104;25105;25106;25107;25108;25109;25110;25111;25112;25113;25114;25115;25116;25117;25118;25119;25120;25121;25122;25123;25124;25125;25126;25127;25128;25129;25130;25131;25132;25133;25134;25135;25136;25137 25092 59 SQLEAIFLR Unmodified 1075.6026 0.60259438 608 Q8IV08;M0R3G9 PLD3 Phospholipase D3 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 75.626 77.213 2 0.0048298 14215 Miao_Sh-c_Flag_mass3_141226_01 86.898 61.424 5132 0 0 1424.5 0 674.95 0 0 3032.6 0 0 0 0 2526 608 2476 23234;23235;23236;23237 25138;25139 25138 2 SQQPLKPQVHTPVATVK Unmodified 1857.0472 0.047231549 599 Q6P3W7 SCYL2 SCY1-like protein 2 yes yes 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 43.782 43.692 4 0.011104 4892 Miao_Sh-H9_Flag_mass3_141226_03 54.813 35.515 5728 0 547.04 497.62 0 0 0 1253.8 1888.7 1540.8 0 0 0 2527 599 2477 23238;23239;23240;23241;23242 25140;25141 25141 2 SQVFSTAADGQTQVEIK Unmodified 1807.8952 0.89520716 441 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 6 6 13 5 3 1 11 22 18 66.574 64.299 2;3 1.138E-117 22050 Miao_Sh-H9_proteinG_mass3_141226_03 219.24 174.73 262650 941.52 888.64 0 22340 9698.1 34453 4592.2 3858.1 714.77 71456 81749 31956 2528 441 2478 23243;23244;23245;23246;23247;23248;23249;23250;23251;23252;23253;23254;23255;23256;23257;23258;23259;23260;23261;23262;23263;23264;23265;23266;23267;23268;23269;23270;23271;23272;23273;23274;23275;23276;23277;23278;23279;23280;23281;23282;23283;23284;23285;23286;23287;23288;23289;23290;23291;23292;23293;23294;23295;23296;23297;23298;23299;23300;23301;23302;23303;23304;23305;23306;23307;23308;23309;23310;23311;23312;23313;23314;23315;23316;23317;23318;23319;23320;23321;23322;23323;23324;23325;23326;23327;23328;23329;23330 25142;25143;25144;25145;25146;25147;25148;25149;25150;25151;25152;25153;25154;25155;25156;25157;25158;25159;25160;25161;25162;25163;25164;25165;25166;25167;25168;25169;25170;25171;25172;25173;25174;25175;25176;25177;25178;25179;25180;25181;25182;25183;25184;25185;25186;25187;25188;25189;25190;25191;25192;25193;25194;25195;25196;25197;25198;25199;25200;25201;25202;25203;25204;25205;25206;25207;25208;25209;25210;25211;25212;25213;25214;25215;25216;25217;25218;25219;25220;25221;25222;25223;25224;25225;25226;25227;25228;25229;25230;25231;25232;25233;25234;25235;25236;25237;25238;25239;25240;25241;25242;25243;25244;25245;25246;25247;25248;25249;25250;25251;25252;25253;25254;25255;25256;25257;25258;25259;25260;25261;25262;25263;25264 25251 123 SQYEQLAEQNR Unmodified 1364.6321 0.6320566 104 P13645;CON__P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 2 1 1 1 1 1 40.809 43.187 2;3 3.2204E-30 9627 Miao_Sh-H9_proteinG_mass3_141226_02 171.32 112.62 8926 0 74.646 0 0 137.78 2883.1 235.3 215.8 0 881.41 2525.9 1972.1 + 2529 104 2479 23331;23332;23333;23334;23335;23336;23337;23338;23339 25265;25266;25267;25268 25267 4 SQYEQLAEQNRK Unmodified 1492.727 0.72701962 104 P13645;CON__P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 2 2 2 35.867 37.737 2;3 0.0032751 7728 Miao_Sh-H9_proteinG_mass3_141226_02 126.21 93.353 37464 514.98 62.198 262.83 256.91 0 9045.4 94.576 0 0 9452.8 8476.7 9297.1 + 2530 104 2480 23340;23341;23342;23343;23344;23345;23346;23347;23348;23349;23350;23351;23352 25269;25270;25271;25272;25273;25274;25275;25276 25273 8 SQYNFIADVVEK Unmodified 1411.6983 0.69834526 282 O43464;O43464-2;O43464-3;O43464-4 HTRA2 Serine protease HTRA2, mitochondrial yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 79.235 79.068 2 0.0020436 16703 Miao_Sh-H9_Flag_mass3_141226_02 74.475 57.264 0 0 0 0 0 0 0 0 0 0 0 0 0 2531 282 2481 23353;23354;23355 25277;25278;25279 25278 3 SRLEVSDDLENVCNWVVDTCLHK Unmodified 2787.2956 0.29561303 297;296 O75688-2;C9JIR6;O75688-4;O75688-5;O75688 PPM1B Protein phosphatase 1B no no 0 0 0 0 1 By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 96.334 96.058 3;4 1.3921E-18 22484 Miao_Sh-H9_Flag_mass3_141226_02 95.926 80.381 21501 0 0 0 0 0 0 0 11407 10093 0 0 0 2532 297;296 2482 23356;23357;23358 25280;25281 25281 2 SRQFSSR Acetyl (Protein N-term) 908.44643 0.44642809 314 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 1 0 0 0 1 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 31.304 33.319 2 0.031795 2680 Miao_Sh-c_proteinG_mass3_141226_02 81.296 46.001 2142.5 0 78.698 0 56.467 494.67 1474.8 37.881 0 0 0 0 0 + 2533 314 2483 23359;23360;23361;23362;23363 25282 25282 1 SSAVDPEPQVK Unmodified 1155.5772 0.57716749 593 Q5SSJ5;X6RGJ2;Q5SWC8;Q5SSJ5-2;B0QZK4;Q5SSJ5-3 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 1 1 32.85 36.86 2 0.0059456 7138 Miao_Sh-H9_proteinG_mass3_141226_03 72.531 52.541 0 0 0 0 0 0 0 0 0 0 0 0 0 2534 593 2484 23364;23365 25283;25284 25284 2 SSEIEQAVQSLDR Unmodified 1460.7107 0.71070086 640 Q9BPX5 ARPC5L Actin-related protein 2/3 complex subunit 5-like protein yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 2 65.767 63.395 2 5.2874E-05 22114 Miao_Sh-H9_proteinG_mass3_141226_01 109.83 79.923 12375 0 0 0 0 0 0 0 0 0 1529.2 10254 591.74 2535 640 2485 23366;23367;23368;23369 25285;25286 25285 2 SSFYVNGLTLGGQK Unmodified 1469.7514 0.75144346 339 P07737;K7EJ44;I3L3D5 PFN1 Profilin-1 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 3 2 2 4 2 3 70.619 71.389 2;3 1.2057E-26 20146 Miao_Sh-H9_proteinG_mass3_141226_03 169.54 138.98 141410 0 13778 0 22196 9611.6 12496 14729 8263.1 0 27548 18020 14770 2536 339 2486 23370;23371;23372;23373;23374;23375;23376;23377;23378;23379;23380;23381;23382;23383;23384;23385;23386;23387;23388;23389 25287;25288;25289;25290;25291;25292;25293;25294;25295;25296;25297;25298;25299;25300;25301;25302;25303;25304;25305;25306;25307 25305 21 SSGPTSLFAVTVAPPGAR Unmodified 1713.905 0.90498399 536 Q00839;Q00839-2 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 3 3 2 3 2 2 1 8 4 2 83.035 81.223 2;3 4.5115E-28 16094 Miao_Sh-c_proteinG_mass3_141226_02 152.94 123.64 58944 353.79 0 4068.6 17155 15130 3548.8 0 3289.6 4133.1 0 7284.7 3980.8 2537 536 2487 23390;23391;23392;23393;23394;23395;23396;23397;23398;23399;23400;23401;23402;23403;23404;23405;23406;23407;23408;23409;23410;23411;23412;23413;23414;23415;23416;23417;23418;23419;23420 25308;25309;25310;25311;25312;25313;25314;25315;25316;25317;25318;25319;25320;25321;25322;25323;25324;25325;25326;25327;25328;25329;25330;25331;25332;25333;25334;25335;25336;25337;25338;25339;25340;25341;25342;25343;25344;25345 25320 38 SSGPYGGGGQYFAK Unmodified 1374.6204 0.62042929 180 P09651;F8W6I7;P09651-3;P09651-2;Q32P51;H0YH80 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 2 3 1 1 2 48.782 50.252 2;3 1.0161E-34 11263 Miao_Sh-c_proteinG_mass3_141226_03 177.41 154.04 145930 245.7 0 0 0 196.3 32592 677.54 1524.9 685.1 34348 47032 28633 2538 180 2488 23421;23422;23423;23424;23425;23426;23427;23428;23429;23430;23431;23432;23433;23434;23435;23436 25346;25347;25348;25349;25350;25351;25352;25353;25354;25355;25356;25357;25358;25359;25360;25361;25362;25363;25364;25365;25366;25367 25348 22 SSGSPYGGGYGSGGGSGGYGSR Unmodified 1909.7827 0.7826966 470 P51991;P51991-2;H7C1J8 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 6 2 3 41.449 43.576 2;3 1.2782E-27 10404 Miao_Sh-H9_proteinG_mass3_141226_01 108.14 99.1 10907 0 0 0 129.64 0 0 0 0 0 2299.7 2114.4 6363.6 2539 470 2489 23437;23438;23439;23440;23441;23442;23443;23444;23445;23446;23447;23448 25368;25369;25370;25371;25372;25373;25374;25375;25376;25377;25378;25379;25380;25381;25382;25383;25384;25385;25386;25387;25388;25389 25373 22 SSGYPLTIEGFAYLWSGAR Unmodified 2074.016 0.015991 643 Q9BUJ2;Q9BUJ2-2;B7Z4B8;Q9BUJ2-4;M0R3F1;Q9BUJ2-3;M0QYZ0;M0QYI8;M0QYM5;M0R0K8 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS 2 2 3 1 1 1 1 1 2 111.52 108.08 2;3 5.5595E-10 29018 Miao_Sh-c_proteinG_mass3_141226_01 108.6 94.257 34648 0 1808.3 0 16844 8585 23.713 644.99 2192.9 680.89 0 1696.3 2171.8 2540 643 2490 23449;23450;23451;23452;23453;23454;23455;23456;23457;23458;23459;23460;23461;23462 25390;25391;25392;25393;25394;25395;25396;25397;25398 25392 8 SSLGPVGLDK Unmodified 971.52876 0.52876073 386 P17987;E7ERF2;F5H676;F5H136;F5H726;F5GZI8;F5GYL4 TCP1 T-complex protein 1 subunit alpha yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 1 1 46.833 49.665 2 0.003511 11341 Miao_Sh-H9_proteinG_mass3_141226_03 103.08 45.906 0 0 0 0 0 0 0 0 0 0 0 0 0 2541 386 2491 23463;23464 25399;25400 25400 2 SSLNPILFR Unmodified 1045.592 0.59202969 136 P39656;E7EWT1;U3KQ84 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 65.075 70.739 2 0.002926 18741 Miao_Sh-c_proteinG_mass3_141226_03 93.143 68.957 0 0 0 0 0 0 0 0 0 0 0 0 0 2542 136 2492 23465 25401 25401 1 SSQPLASK Unmodified 816.43413 0.43413207 384;383 P17096-2;E5RIT9;P17096;H7BYM6;P17096-3 HMGA1;C2orf81 High mobility group protein HMG-I/HMG-Y no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 27.309 27.74 2 0.035982 5216 Miao_Sh-H9_proteinG_mass3_141226_02 71.425 33.007 1877.7 0 0 0 0 0 0 26.858 41.077 0 646.49 676.18 487.07 2543 384;383 2493 23466;23467;23468;23469;23470 25402 25402 1 SSSGLLEWESK Unmodified 1221.5877 0.58773217 371 P14866;M0QXS5;P14866-2;M0R076;M0QYT0 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 1 1 1 1 1 61.676 64.683 2 1.0745E-40 16667 Miao_Sh-c_proteinG_mass3_141226_03 188.96 121.58 19169 0 0 0 0 474.91 4725.2 0 0 2789.8 0 5794.6 5384.9 2544 371 2494 23471;23472;23473;23474;23475;23476;23477;23478;23479;23480;23481 25403;25404;25405;25406;25407;25408;25409;25410;25411;25412;25413;25414;25415 25404 13 SSSPAPADIAQTVQEDLR Unmodified 1883.9225 0.92248455 561 Q13283;F5H4D6 G3BP1 Ras GTPase-activating protein-binding protein 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 85.659 80.296 2 0.009869 17615 Miao_Sh-c_proteinG_mass3_141226_01 47.082 34.29 1912.9 0 0 0 1522.5 0 0 0 0 0 390.41 0 0 2545 561 2495 23482;23483 25416 25416 0 SSSQVPPILQETDK Unmodified 1527.7781 0.77805214 604 Q86UE4;H0YBJ8;E5RJU9 MTDH Protein LYRIC yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 54.484 60.248 2 0.040177 14828 Miao_Sh-c_proteinG_mass3_141226_03 43.69 27.75 0 0 0 0 0 0 0 0 0 0 0 0 0 2546 604 2496 23484 25417 25417 1 SSTATHPPGPAVQLNK Unmodified 1603.8318 0.83181904 572 Q14684;Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 38.556 41.213 3 0.034405 8723 Miao_Sh-H9_proteinG_mass3_141226_03 34.432 11.112 765.48 0 0 0 0 0 0 0 0 0 0 0 765.48 2547 572 2497 23485 25418 25418 1 STAGDTHLGGEDFDNR Unmodified 1690.7183 0.71830543 356 P11142;E9PKE3;P11142-2;E9PN89;P54652 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 4 1 1 1 1 3 2 44.959 45.783 2;3 1.1642E-67 9649 Miao_Sh-H9_proteinG_mass3_141226_03 186.72 175.35 84007 2542.6 1752.9 1707.8 933.94 77.272 14688 4135 4170.9 3869.1 16897 18373 14860 2548 356 2498 23486;23487;23488;23489;23490;23491;23492;23493;23494;23495;23496;23497;23498;23499;23500;23501;23502;23503 25419;25420;25421;25422;25423;25424;25425;25426;25427;25428;25429;25430;25431;25432;25433;25434;25435;25436;25437;25438;25439;25440;25441;25442;25443;25444;25445 25445 27 STAISLFYELSENDLNFIK Unmodified 2203.1049 0.10486559 366 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 106.16 97.492 3 0.010425 27044 Miao_Sh-c_Flag_mass3_141226_03 42.529 35.293 6511.2 0 0 0 0 0 0 0 0 2733 0 0 3778.1 2549 366 2499 23504;23505;23506 25446;25447 25446 2 STELLIR Unmodified 830.48617 0.48616764 28 P68431;P84243;Q71DI3;Q16695;K7EMV3;B4DEB1;K7EK07;K7ES00;Q6NXT2;K7EP01 HIST1H3A;H3F3A;HIST2H3A;HIST3H3;H3F3B;H3F3C Histone H3.1;Histone H3.3;Histone H3.2;Histone H3.1t;Histone H3;Histone H3.3C no no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 1 2 1 1 1 2 55.039 56.134 1;2 1.4962E-45 12377 Miao_Sh-H9_proteinG_mass3_141226_01 206.51 61.612 48995 0 1661.4 1396.8 145.33 0 3121.3 617.62 0 2888.6 21226 968.49 16969 2550 28 2500 23507;23508;23509;23510;23511;23512;23513;23514;23515;23516;23517;23518;23519;23520 25448;25449;25450;25451;25452;25453;25454;25455;25456;25457 25453 10 STESLQANVQR Unmodified 1231.6157 0.61567826 414 P26373;J3QSB4 RPL13 60S ribosomal protein L13 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 3 3 2 2 3 2 2 2 4 35.903 37.534 2;3 2.2546E-170 3699 Miao_Sh-H9_Flag_mass3_141226_03 257.8 187.54 57517 2175.1 1731 1899.8 941.46 1465.8 8404 6054.4 1321.2 4501.9 12287 8068.9 8666 2551 414 2501 23521;23522;23523;23524;23525;23526;23527;23528;23529;23530;23531;23532;23533;23534;23535;23536;23537;23538;23539;23540;23541;23542;23543;23544;23545;23546;23547 25458;25459;25460;25461;25462;25463;25464;25465;25466;25467;25468;25469;25470;25471;25472;25473;25474;25475;25476;25477;25478;25479;25480;25481;25482;25483;25484;25485;25486;25487;25488;25489;25490 25479 33 STFVLDEFK Unmodified 1084.5441 0.54407645 417 P26641;B4DTG2 EEF1G Elongation factor 1-gamma yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 2 2 1 1 2 2 1 3 3 71.765 69.848 2 0.00051479 13077 Miao_Sh-c_Flag_mass3_141226_01 98.044 85.76 33753 2122.2 2230.8 0 2196.5 715.97 4482.5 3541.3 3128.1 0 11813 3522.9 0 2552 417 2502 23548;23549;23550;23551;23552;23553;23554;23555;23556;23557;23558;23559;23560;23561;23562;23563;23564 25491;25492;25493;25494;25495;25496;25497;25498;25499;25500 25491 9 STFVLDEFKR Unmodified 1240.6452 0.64518747 417 P26641;B4DTG2 EEF1G Elongation factor 1-gamma yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 99.106 86.925 3 0.04897 30788 Miao_Sh-H9_proteinG_mass3_141226_01 64.82 52.03 2028.3 0 0 0 0 0 0 0 0 0 2028.3 0 0 2553 417 2503 23565 25501 25501 0 STGEAFVQFASK Unmodified 1270.6194 0.61936665 426 P31942;P31942-2;P31942-3 HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 1 1 2 2 3 3 1 61.419 62.464 2 2.6798E-15 16605 Miao_Sh-H9_proteinG_mass3_141226_02 151.52 116.77 41539 453.17 0 994.21 4755.4 0 1981.3 0 2601.9 0 10417 10373 9963.5 2554 426 2504 23566;23567;23568;23569;23570;23571;23572;23573;23574;23575;23576;23577;23578;23579;23580;23581 25502;25503;25504;25505;25506;25507;25508;25509;25510;25511 25507 10 STGEAFVQFASQEIAEK Unmodified 1840.8843 0.88430813 199 P31943;G8JLB6;E9PCY7;D6RIU0;D6RBM0;H0YB39;P55795;E5RGH4;E5RGV0;E7EN40 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2;Heterogeneous nuclear ribonucleoprotein H2, N-terminally processed yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 1 4 3 3 2 2 5 94.612 89.846 2;3 2.0351E-09 17122 Miao_Sh-c_Flag_mass3_141226_03 92.319 72.09 45100 6066.2 2592.7 0 4216 0 0 4963.1 5462.8 4575.5 6859.4 3986 6378 2555 199 2505 23582;23583;23584;23585;23586;23587;23588;23589;23590;23591;23592;23593;23594;23595;23596;23597;23598;23599;23600;23601;23602;23603;23604;23605;23606;23607 25512;25513;25514;25515;25516;25517;25518;25519;25520;25521;25522;25523;25524;25525;25526;25527;25528;25529;25530;25531;25532;25533;25534 25515 22 STGGAPTFNVTVTK Unmodified 1378.7092 0.70924429 339 P07737;K7EJ44 PFN1 Profilin-1 yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching 1 1 2 1 1 1 54.027 55.748 2 2.0728E-09 13059 Miao_Sh-c_proteinG_mass3_141226_03 139.66 96.943 102350 4548.4 0 0 4545.1 0 23729 0 0 13310 34673 21547 0 2556 339 2506 23608;23609;23610;23611;23612;23613;23614 25535;25536;25537;25538;25539;25540;25541;25542;25543;25544;25545;25546;25547;25548 25538 14 STIIGESISR Unmodified 1061.5717 0.57168818 480 P54136;P54136-2;F5H3T8 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 51.873 52.294 2 0.014674 12130 Miao_Sh-H9_proteinG_mass3_141226_02 70.942 13.661 5680.9 337.52 321.23 0 0 0 0 0 648.11 1817.7 0 2556.3 0 2557 480 2507 23615;23616;23617;23618;23619 25549 25549 1 STLITDGSTPINLFNTAFGLLGMGPEGQPLGR Unmodified 3273.6704 0.67036295 573 Q14764 MVP Major vault protein yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 119.3 119.66 3 1.2691E-07 32325 Miao_Sh-c_proteinG_mass3_141226_01 46.15 36.073 8041.9 0 0 0 8041.9 0 0 0 0 0 0 0 0 2558 573 2508 23620 25550 25550 1 STLITDGSTPINLFNTAFGLLGMGPEGQPLGR Oxidation (M) 3289.6653 0.66527757 573 Q14764 MVP Major vault protein yes yes 0 0 1 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 115.47 98.28 3 2.2573E-07 36957 Miao_Sh-H9_proteinG_mass3_141226_03 46.15 41.098 0 0 0 0 0 0 0 0 0 0 0 0 0 2559 573 2508 23621 25551 25551 74 1 STLYVSPHPDAFPSLR Acetyl (Protein N-term) 1827.9155 0.91554867 416 P26640;A2ABF4 VARS Valine--tRNA ligase yes no 1 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 78.77 80.224 2 0.01501 16762 Miao_Sh-c_proteinG_mass3_141226_01 40.493 26.061 0 0 0 0 0 0 0 0 0 0 0 0 0 2560 416 2509 23622 25552 25552 1 STNGDTFLGGEDFDQALLR Unmodified 2054.9545 0.95451296 441 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 2 3 1 2 3 3 10 32 99.838 93.142 2;3 5.4779E-168 20169 Miao_Sh-c_proteinG_mass3_141226_01 243.16 219.27 414260 0 0 1206.2 98040 44810 45176 7267.7 0 0 59059 112750 45952 2561 441 2510 23623;23624;23625;23626;23627;23628;23629;23630;23631;23632;23633;23634;23635;23636;23637;23638;23639;23640;23641;23642;23643;23644;23645;23646;23647;23648;23649;23650;23651;23652;23653;23654;23655;23656;23657;23658;23659;23660;23661;23662;23663;23664;23665;23666;23667;23668;23669;23670;23671;23672;23673;23674;23675;23676;23677;23678 25553;25554;25555;25556;25557;25558;25559;25560;25561;25562;25563;25564;25565;25566;25567;25568;25569;25570;25571;25572;25573;25574;25575;25576;25577;25578;25579;25580;25581;25582;25583;25584;25585;25586;25587;25588;25589;25590;25591;25592;25593;25594;25595;25596;25597;25598;25599;25600;25601;25602;25603;25604;25605;25606;25607;25608;25609;25610;25611;25612;25613;25614;25615;25616;25617;25618;25619;25620;25621;25622;25623;25624;25625;25626;25627;25628;25629;25630;25631;25632;25633;25634;25635;25636;25637;25638;25639;25640;25641 25560 88 STTTGHLIYK Unmodified 1119.5924 0.59242362 527 P68104;Q5VTE0;Q05639;A6PW80;Q5JR01 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 2 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 2 2 1 1 2 1 2 1 2 2 2 35.28 36.513 2;3 0.0020832 3479 Miao_Sh-H9_Flag_mass3_141226_02 83.883 42.456 23758 567.77 854.34 1181.1 300.28 387.6 3883.4 271.29 642.11 621.7 6340.8 5445.7 3261.7 2562 527 2511 23679;23680;23681;23682;23683;23684;23685;23686;23687;23688;23689;23690;23691;23692;23693;23694;23695;23696;23697;23698 25642;25643;25644;25645;25646;25647;25648;25649;25650;25651;25652;25653;25654;25655;25656;25657;25658;25659;25660;25661;25662;25663;25664 25651 23 SVDPTLALSVYLR Unmodified 1432.7926 0.79257999 535 Q00610;Q00610-2 CLTC Clathrin heavy chain 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 96.11 93.814 2 3.6284E-16 21188 Miao_Sh-H9_Flag_mass3_141226_02 108.32 81.665 15715 436.88 0 0 799.3 0 0 0 5948 4796.4 3734.8 0 0 2563 535 2512 23699;23700;23701;23702;23703 25665;25666;25667 25665 2 SVEITTDNILEGR Unmodified 1445.7362 0.73618733 666 Q9UKV5;H3BRK9;R4GNG2 AMFR E3 ubiquitin-protein ligase AMFR yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 67.141 68.545 2 0.012843 11331 Miao_Sh-c_Flag_mass3_141226_03 54.898 37.232 0 0 0 0 0 0 0 0 0 0 0 0 0 2564 666 2513 23704 25668 25668 1 SVFALTNGIYPHK Unmodified 1445.7667 0.76669959 542 Q02878 RPL6 60S ribosomal protein L6 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 1 1 2 2 3 1 1 2 3 3 3 86.142 81.726 2;3 1.5204E-08 13369 Miao_Sh-H9_Flag_mass3_141226_02 134.99 81.233 140360 547.86 0 13481 11190 15150 14437 10330 22172 20785 17514 9759.4 4989.2 2565 542 2514 23705;23706;23707;23708;23709;23710;23711;23712;23713;23714;23715;23716;23717;23718;23719;23720;23721;23722;23723;23724;23725;23726;23727;23728;23729 25669;25670;25671;25672;25673;25674;25675;25676;25677;25678;25679;25680;25681;25682;25683;25684;25685;25686;25687;25688;25689;25690;25691;25692;25693;25694;25695;25696;25697;25698;25699;25700;25701;25702;25703;25704;25705;25706;25707;25708 25689 40 SVGDGETVEFDVVEGEK Unmodified 1794.816 0.81595379 381;525 P16989;P16989-2;P16989-3;Q9Y2T7;P67809;H0Y449 YBX3;YBX2;YBX1 Y-box-binding protein 3;Y-box-binding protein 2;Nuclease-sensitive element-binding protein 1 no no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 4 4 69.025 66.755 2;3 4.9996E-14 24579 Miao_Sh-H9_proteinG_mass3_141226_03 112.91 96.733 12365 0 0 1378.3 0 0 621.79 583.13 2893.6 0 6717.5 0 170.38 2566 381;525 2515 23730;23731;23732;23733;23734;23735;23736;23737;23738;23739;23740;23741;23742;23743;23744 25709;25710;25711;25712;25713;25714;25715;25716;25717;25718;25719;25720;25721;25722;25723;25724;25725;25726;25727;25728;25729 25728 20 SVHELEK Unmodified 840.43413 0.43413207 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 25.615 27.169 2 0.045362 5143 Miao_Sh-H9_proteinG_mass3_141226_03 67.903 36.613 0 0 0 0 0 0 0 0 0 0 0 0 0 2567 433 2516 23745 25730 25730 1 SVIEQGGIQTVDQLIK Unmodified 1726.9465 0.94651445 618 Q8WUM4;Q8WUM4-2 PDCD6IP Programmed cell death 6-interacting protein yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 82.667 82.316 2 0.0034118 17782 Miao_Sh-H9_Flag_mass3_141226_03 56.428 41.743 0 0 0 0 0 0 0 0 0 0 0 0 0 2568 618 2517 23746 25731 25731 1 SVKPQILSVFGDIALAIGGEFK Unmodified 2288.278 0.27801935 574 Q14974;Q14974-2;F5H4R7;J3KTM9 KPNB1 Importin subunit beta-1 yes no 0 0 0 0 1 By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 2 119.1 120.15 3 9.9727E-09 31313 Miao_Sh-H9_Flag_mass3_141226_03 71.143 65.18 12008 3162.4 3219 0 0 2114.6 0 3123.1 0 389.03 0 0 0 2569 574 2518 23747;23748;23749;23750;23751;23752;23753 25732;25733;25734;25735 25735 4 SVLDAAQIVGLNCLR Unmodified 1627.8716 0.87157537 625 Q92598;Q92598-2;Q92598-3;Q92598-4 HSPH1 Heat shock protein 105 kDa yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 93.844 90.698 3 0.00081287 20128 Miao_Sh-H9_Flag_mass3_141226_03 66.784 51.787 6519.7 1098.3 879.18 0 0 0 0 860.39 0 0 3681.8 0 0 2570 625 2519 23754;23755;23756;23757;23758 25736;25737 25737 2 SVLPALQAR Unmodified 953.56581 0.56581494 639 Q99973;Q99973-2;G3V470;G3V5X7;G3V2A4 TEP1 Telomerase protein component 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 56.842 59.536 2 0.034497 14306 Miao_Sh-H9_proteinG_mass3_141226_02 63.673 22.895 2981.9 0 0 0 0 0 739.53 489.39 0 0 0 1100.8 652.14 2571 639 2520 23759;23760;23761;23762 25738 25738 1 SVNELIYK Unmodified 964.52295 0.52294707 388 P18124;A8MUD9 RPL7 60S ribosomal protein L7 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 50.155 50.735 2 0.0014814 12911 Miao_Sh-H9_proteinG_mass3_141226_01 118.71 68.996 20265 0 302.3 0 840.89 0 0 1351.8 353.76 218.61 9133.5 8064.2 0 2572 388 2521 23763;23764;23765;23766;23767;23768;23769 25739;25740;25741;25742 25740 4 SVNESLNNLFITEEDYQALR Unmodified 2354.139 0.13901926 535 Q00610;Q00610-2;J3KS13;K7EJJ5 CLTC Clathrin heavy chain 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 94.6 93.747 3 1.228E-05 20877 Miao_Sh-H9_Flag_mass3_141226_01 65.149 47.789 0 0 0 0 0 0 0 0 0 0 0 0 0 2573 535 2522 23770 25743 25743 1 SVPTWLK Unmodified 829.46979 0.46978929 505 P62277;J3KMX5;E9PS50 RPS13 40S ribosomal protein S13 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 1 1 58.101 60.176 2 0.029513 14674 Miao_Sh-c_proteinG_mass3_141226_03 82.305 39.305 31627 0 364.94 0 0 0 13784 0 686.25 0 0 8178.3 8612.8 2574 505 2523 23771;23772;23773;23774;23775 25744 25744 1 SVQLAIEITTNSQEAAAK Unmodified 1872.9793 0.97927114 573 Q14764 MVP Major vault protein yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 7 4 15 5 10 81.652 71.343 2;3 2.0231E-74 24607 Miao_Sh-H9_proteinG_mass3_141226_01 186.45 133.42 82182 861.73 0 0 7693.8 0 8065.6 0 0 0 32658 225.12 32678 2575 573 2524 23776;23777;23778;23779;23780;23781;23782;23783;23784;23785;23786;23787;23788;23789;23790;23791;23792;23793;23794;23795;23796;23797;23798;23799;23800;23801;23802;23803;23804;23805;23806;23807;23808;23809;23810;23811;23812;23813;23814;23815;23816;23817 25745;25746;25747;25748;25749;25750;25751;25752;25753;25754;25755;25756;25757;25758;25759;25760;25761;25762;25763;25764;25765;25766;25767;25768;25769;25770;25771;25772;25773;25774;25775;25776;25777;25778;25779;25780;25781;25782;25783;25784;25785;25786;25787;25788;25789;25790;25791;25792;25793;25794;25795;25796 25772 52 SVQTTLQTDEVK Unmodified 1347.6882 0.6881745 121;292 O94905;E5RHW4;O94905-2;O94905-3;O75477;B0QZ43 ERLIN2;ERLIN1 Erlin-2;Erlin-1 no no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 46.696 47.122 2 0.0010941 4919 Miao_Sh-c_Flag_mass3_141226_03 88.021 67.243 0 0 0 0 0 0 0 0 0 0 0 0 0 2576 121;292 2525 23818;23819 25797;25798 25797 2 SVSTPLDSSR Unmodified 1047.5197 0.51965261 688 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 3 3 1 3 2 3 39.612 39.799 2 0.0022797 3830 Miao_Sh-c_Flag_mass3_141226_02 110.38 61.322 68444 5881.8 10370 9904.6 0 204.59 0 14967 13324 13792 0 0 0 + 2577 688 2526 23820;23821;23822;23823;23824;23825;23826;23827;23828;23829;23830;23831;23832;23833;23834;23835 25799;25800;25801;25802;25803;25804 25799 6 SVTEQGAELSNEER Unmodified 1547.7063 0.70634376 523 P63104;E7EX29;E7ESK7;E5RGE1;E5RIR4;E9PD24;E7EVZ2 YWHAZ 14-3-3 protein zeta/delta yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 1 2 2 1 4 2 1 40.487 42.302 2;3 4.5754E-34 9199 Miao_Sh-H9_proteinG_mass3_141226_02 170.11 126.35 15435 150.8 300.53 149.42 270.7 0 4807.6 0 0 302.96 1790.8 3741.1 3920.7 2578 523 2527 23836;23837;23838;23839;23840;23841;23842;23843;23844;23845;23846;23847;23848;23849;23850;23851 25805;25806;25807;25808;25809;25810;25811;25812;25813;25814;25815 25811 11 SVTLLIK Unmodified 772.50584 0.50584045 444 P40227;B4DPJ8;P40227-2 CCT6A T-complex protein 1 subunit zeta yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 1 1 1 1 56.491 58.031 2 0.037482 13348 Miao_Sh-c_proteinG_mass3_141226_03 77.741 20.638 4464.7 425.94 237.73 417.92 0 0 1004.1 791.02 0 0 819.42 0 768.55 2579 444 2528 23852;23853;23854;23855;23856;23857;23858 25816 25816 1 SVVTSIFGVK Unmodified 1035.5964 0.59644637 229 P41252;J3KR24;Q5TCC5;Q5TCD2 IARS Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 78.038 77.486 2 0.052585 15650 Miao_Sh-H9_Flag_mass3_141226_01 48.284 34.705 0 0 0 0 0 0 0 0 0 0 0 0 0 2580 229 2529 23859 25817 25817 1 SVYAHFPINVVIQENGSLVEIR Unmodified 2483.3173 0.3172584 117 P32969;D6RAN4;H0Y9V9;E7ESE0 RPL9 60S ribosomal protein L9 yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 2 1 94.507 94.828 3 2.5551E-31 37156 Miao_Sh-H9_proteinG_mass3_141226_01 123.12 104.81 26859 4804 0 2726.8 6417.4 0 0 6009.8 6901 0 0 0 0 2581 117 2530 23860;23861;23862;23863;23864;23865;23866 25818;25819;25820;25821;25822;25823 25823 3 SWQDELAQQAEEGSAR Unmodified 1803.8024 0.80236941 604 Q86UE4 MTDH Protein LYRIC yes yes 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 72.047 67.887 3 0.0004026 12886 Miao_Sh-c_proteinG_mass3_141226_02 65.477 50.316 2334.8 0 0 0 0 1177.7 0 0 0 0 1157.1 0 0 2582 604 2531 23867;23868;23869 25824;25825;25826;25827 25824 4 SYCAEIAHNVSSK Unmodified 1464.6667 0.66672755 181 P62910;F8W727;D3YTB1 RPL32 60S ribosomal protein L32 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 1 1 2 1 1 1 1 2 43.725 45.305 2;3 2.8401E-06 10880 Miao_Sh-H9_proteinG_mass3_141226_01 127.36 97.812 40797 0 317.81 334.62 513.81 35.903 6259 1094.7 1449.4 1231.4 2687.4 14659 12214 2583 181 2532 23870;23871;23872;23873;23874;23875;23876;23877;23878;23879;23880;23881;23882;23883;23884 25828;25829;25830;25831;25832;25833;25834;25835;25836;25837;25838;25839;25840 25832 12 SYELPDGQVITIGNER Unmodified 1789.8846 0.88464248 524;528;589 P63261;P60709;Q6S8J3;A5A3E0;P63267-2;Q9BYX7;P68133;P68032;Q5T8M8;A6NL76;P63267;P62736;Q5T8M7;Q562R1 ACTG1;ACTB;POTEE;POTEF;ACTG2;POTEKP;ACTA1;ACTC1;ACTA2;ACTBL2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Actin, gamma-enteric smooth muscle;Putative beta-actin-like protein 3;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2 no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 4 10 8 2 8 2 3 2 11 12 10 84.201 79.45 2;3 1.6071E-111 14797 Miao_Sh-c_Flag_mass3_141226_01 224.67 197.33 1015700 55376 66848 24463 42262 43981 1390.2 83672 109710 81635 65782 219380 221210 2584 524;528;589 2533 23885;23886;23887;23888;23889;23890;23891;23892;23893;23894;23895;23896;23897;23898;23899;23900;23901;23902;23903;23904;23905;23906;23907;23908;23909;23910;23911;23912;23913;23914;23915;23916;23917;23918;23919;23920;23921;23922;23923;23924;23925;23926;23927;23928;23929;23930;23931;23932;23933;23934;23935;23936;23937;23938;23939;23940;23941;23942;23943;23944;23945;23946;23947;23948;23949;23950;23951;23952;23953;23954;23955;23956;23957;23958;23959 25841;25842;25843;25844;25845;25846;25847;25848;25849;25850;25851;25852;25853;25854;25855;25856;25857;25858;25859;25860;25861;25862;25863;25864;25865;25866;25867;25868;25869;25870;25871;25872;25873;25874;25875;25876;25877;25878;25879;25880;25881;25882;25883;25884;25885;25886;25887;25888;25889;25890;25891;25892;25893;25894;25895;25896;25897;25898;25899;25900;25901;25902;25903;25904;25905;25906;25907;25908;25909;25910;25911;25912;25913;25914;25915;25916;25917;25918;25919;25920;25921;25922;25923;25924;25925;25926;25927;25928;25929;25930;25931;25932;25933;25934;25935;25936;25937;25938;25939;25940;25941;25942;25943;25944;25945;25946;25947;25948;25949;25950;25951;25952;25953;25954;25955;25956;25957;25958;25959;25960;25961;25962;25963;25964;25965;25966;25967;25968;25969;25970;25971;25972;25973;25974;25975;25976;25977;25978;25979;25980;25981;25982;25983;25984;25985;25986;25987;25988;25989;25990;25991;25992;25993;25994;25995;25996;25997;25998;25999;26000;26001;26002;26003;26004;26005;26006;26007;26008;26009;26010;26011;26012;26013;26014;26015;26016;26017;26018;26019;26020 25844 180 SYLYPSTLVR Unmodified 1197.6394 0.63937381 473 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 2 2 1 1 1 1 68.17 66.816 2 0.0016483 10694 Miao_Sh-c_Flag_mass3_141226_01 101.82 65.232 27328 5198.3 690.68 1320.9 0 0 0 11145 7778.7 0 229.1 965.38 0 2585 473 2534 23960;23961;23962;23963;23964;23965;23966;23967;23968 26021;26022;26023 26021 3 SYNDELQFLEK Unmodified 1384.6511 0.65106071 680 Q9Y3I0;E7EQS9 RTCB tRNA-splicing ligase RtcB homolog yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 1 1 2 1 1 85.318 79.776 2 0.00035899 14648 Miao_Sh-c_proteinG_mass3_141226_01 122.39 95.294 29544 1411 0 2328.3 3917.1 0 1487.1 0 2203.5 0 12137 4532 1527.4 2586 680 2535 23969;23970;23971;23972;23973;23974;23975;23976;23977;23978;23979;23980;23981 26024;26025;26026;26027;26028;26029;26030;26031;26032;26033;26034 26026 11 TAAENDFVTLK Unmodified 1207.6085 0.60846762 108 P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 1 2 1 2 1 2 52.915 54.549 2 0.0029058 8599 Miao_Sh-H9_Flag_mass3_141226_03 83.214 54.151 7794.4 0 0 0 0 0 2858.2 0 847.2 516.67 3059.2 513.09 0 + 2587 108 2536 23982;23983;23984;23985;23986;23987;23988;23989;23990 26035;26036;26037;26038;26039 26038 5 TAAENEFVTLK Unmodified 1221.6241 0.62411768 98 P02538;CON__P02538;P48668;CON__P04259;CON__P48668;P12035;J3QST3;CON__P12035 KRT6A;KRT6C;KRT3 Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 3 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 1 1 1 55.672 58.805 2 3.68E-15 15627 Miao_Sh-H9_proteinG_mass3_141226_01 156.36 110.36 37674 0 0 0 319.79 0 11593 0 0 0 10001 9377 6383.8 + 2588 98 2537 23991;23992;23993;23994;23995;23996 26040;26041;26042;26043;26044;26045 26042 6 TAAFLLPILSQIYSDGPGEALR Unmodified 2331.2474 0.2474475 267 O00571;O00571-2 DDX3X ATP-dependent RNA helicase DDX3X yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 118.47 116.2 3 9.3929E-14 30413 Miao_Sh-H9_Flag_mass3_141226_03 96.881 83.726 11256 0 3069.5 2819.4 2231.1 0 40.184 0 0 3095.9 0 0 0 2589 267 2538 23997;23998;23999;24000;24001 26046;26047;26048 26048 2 TAFDDAIAELDTLNEDSYK Unmodified 2129.9641 0.96407459 495 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 100.84 102.3 3 4.1073E-05 24998 Miao_Sh-c_proteinG_mass3_141226_01 64.249 60.334 0 0 0 0 0 0 0 0 0 0 0 0 0 2590 495 2539 24002 26049 26049 1 TAFDEAIAELDTLNEESYK Unmodified 2157.9954 0.99537472 427 P31946;P31946-2 YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 115.22 100.54 3 4.5834E-12 37039 Miao_Sh-H9_proteinG_mass3_141226_01 94.281 83.907 0 0 0 0 0 0 0 0 0 0 0 0 0 2591 427 2540 24003;24004 26050;26051 26050 2 TAFDEAIAELDTLSEESYK Unmodified 2130.9845 0.98447568 523 P63104;E7EX29;B0AZS6;P63104-2;B7Z2E6;H0YB80 YWHAZ 14-3-3 protein zeta/delta yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 1 1 1 1 3 2 2 1 108.17 107.72 2;3 1.2469E-43 25060 Miao_Sh-c_Flag_mass3_141226_01 169.06 139.44 61199 5931.2 6775.3 7764.3 9047.6 5101.6 7090.4 0 10930 8558.5 0 0 0 2592 523 2541 24005;24006;24007;24008;24009;24010;24011;24012;24013;24014;24015;24016;24017;24018;24019;24020;24021 26052;26053;26054;26055;26056;26057;26058;26059;26060;26061;26062;26063;26064;26065;26066;26067;26068;26069;26070 26053 19 TAFLASLVSALQAPDGAK Unmodified 1758.9516 0.95159983 639 Q99973;Q99973-2;G3V470;G3V5X7;G3V2A4 TEP1 Telomerase protein component 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 111.95 104.07 3 0.052148 38636 Miao_Sh-H9_proteinG_mass3_141226_01 29.172 20.575 6518.8 0 0 0 0 372.85 1670.2 0 1157.8 0 2274.5 0 1043.5 2593 639 2542 24022;24023;24024;24025;24026 26071 26071 1 TAFQEALDAAGDK Unmodified 1335.6307 0.63065962 353 P10599;P10599-2 TXN Thioredoxin yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 2 1 1 1 2 3 67.369 67.088 2 4.5473E-05 17552 Miao_Sh-H9_proteinG_mass3_141226_03 110.35 87.229 7003.1 0 0 0 1259.7 0 89.701 0 3296.8 1053.7 0 0 1303.2 2594 353 2543 24027;24028;24029;24030;24031;24032;24033;24034;24035;24036;24037;24038 26072;26073;26074;26075;26076;26077;26078;26079 26078 8 TALIHDGLAR Unmodified 1065.5931 0.59309232 409 P25398 RPS12 40S ribosomal protein S12 yes yes 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 2 2 42.384 44.075 3 0.0022402 4893 Miao_Sh-H9_Flag_mass3_141226_01 82.417 42.065 5725.8 276.62 201.25 218.79 190.91 174.54 0 521.3 0 0 1810.2 1452.1 880.16 2595 409 2544 24039;24040;24041;24042;24043;24044;24045;24046;24047;24048;24049 26080;26081;26082;26083;26084;26085 26082 6 TALLDAAGVASLLTTAEVVVTEIPK Unmodified 2481.3942 0.39417132 354 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 1 120.82 122.5 3 2.8229E-20 33662 Miao_Sh-c_proteinG_mass3_141226_02 97.825 89.164 13656 0 219.52 0 3547.1 9889.7 0 0 0 0 0 0 0 2596 354 2545 24050;24051;24052 26086;26087;26088;26089 26087 4 TAPAVVYIEILDR Unmodified 1458.8082 0.80823006 282 O43464;O43464-2;O43464-3;O43464-4 HTRA2 Serine protease HTRA2, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 92.999 92.723 2 0.027545 21836 Miao_Sh-H9_Flag_mass3_141226_03 51.771 39.503 5655.7 0 0 0 0 0 0 0 2110.3 3545.4 0 0 0 2597 282 2546 24053;24054 26090 26090 1 TATESFASDPILYRPVAVALDTK Unmodified 2464.285 0.28495522 368 P14618;P14618-2;P14618-3;H3BTN5;H3BQ34;H3BT25;H3BUW1;H3BTJ2 PKM Pyruvate kinase PKM;Pyruvate kinase yes no 0 0 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 3 2 2 3 3 1 1 1 1 2 97.492 95.873 3 1.1096E-22 19678 Miao_Sh-c_proteinG_mass3_141226_01 115.06 96.477 161000 20803 0 12477 14422 21437 0 0 20551 14834 16183 19479 20811 2598 368 2547 24055;24056;24057;24058;24059;24060;24061;24062;24063;24064;24065;24066;24067;24068;24069;24070;24071;24072;24073;24074;24075 26091;26092;26093;26094;26095;26096;26097;26098;26099;26100;26101;26102;26103;26104;26105;26106;26107;26108;26109;26110;26111;26112;26113;26114;26115;26116;26117;26118;26119 26099 29 TATFAISILQQIELDLK Unmodified 1903.0666 0.066629587 488 P60842;J3QL43;J3KT12;P60842-2;J3KTB5;J3QS69;J3QR64;J3QKZ9;J3QLN6;J3KS25;B4E102;J3KS93 EIF4A1 Eukaryotic initiation factor 4A-I yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 2 1 5 2 1 3 1 1 2 119.02 115.35 2;3 1.4491E-89 27978 Miao_Sh-c_Flag_mass3_141226_01 201.57 176.45 65297 9009.9 10334 18250 0 4415.7 0 8911.7 1508.9 0 0 1439.6 11427 2599 488 2548 24076;24077;24078;24079;24080;24081;24082;24083;24084;24085;24086;24087;24088;24089;24090;24091;24092;24093 26120;26121;26122;26123;26124;26125;26126;26127;26128;26129;26130;26131;26132;26133;26134 26121 15 TATLRPYLSAVR Acetyl (Protein N-term) 1388.7776 0.77759863 185 P59998;F8WCF6;F8WDD7;P59998-2;F8WDW3;F8WE39 ARPC4;ARPC4-TTLL3 Actin-related protein 2/3 complex subunit 4 yes no 1 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 1 65.664 65.176 2 0.029635 20541 Miao_Sh-c_proteinG_mass3_141226_03 53.051 26.933 4391.4 384.83 0 0 0 0 3676.5 182.8 0 0 0 0 147.29 2600 185 2549 24094;24095;24096;24097 26135 26135 1 TAVAPIER Unmodified 855.48142 0.48141661 322;361 P12236;I7HJJ0;P12235;V9GYG0;Q9H0C2;P05141 SLC25A6;SLC25A4;SLC25A31;SLC25A5 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed;ADP/ATP translocase 1;ADP/ATP translocase 4;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed no no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 1 1 35.479 35.635 2 0.015286 3367 Miao_Sh-c_Flag_mass3_141226_02 83.948 52.658 6041.3 614.3 749.34 730.52 212.51 0 0 590.06 733.84 824.6 1586.1 0 0 2601 361;322 2550 24098;24099;24100;24101;24102;24103;24104;24105 26136;26137;26138;26139 26137 4 TAVETAVLLLR Unmodified 1184.7129 0.71287311 43 P49368;B4DUR8;P49368-2 CCT3 T-complex protein 1 subunit gamma yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 3 2 1 2 1 1 2 2 1 1 82.226 78.01 2 6.4939E-45 17054 Miao_Sh-H9_Flag_mass3_141226_01 178.1 135.77 23464 2974.6 0 2425.9 2946.8 0 1298.2 0 4992.5 5323.6 0 2946.1 556.05 2602 43 2551 24106;24107;24108;24109;24110;24111;24112;24113;24114;24115;24116;24117;24118;24119;24120;24121;24122 26140;26141;26142;26143;26144;26145;26146;26147;26148;26149;26150;26151;26152;26153;26154;26155;26156;26157;26158 26151 19 TAVFGFETSEAK Unmodified 1285.619 0.6190323 573 Q14764 MVP Major vault protein yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 2 2 3 1 2 2 1 4 66.881 66.239 2 1.5928E-25 16609 Miao_Sh-c_proteinG_mass3_141226_03 161.25 131.94 294400 455.34 1090.6 0 29149 25644 62123 0 1401.1 1825 63154 52473 57081 2603 573 2552 24123;24124;24125;24126;24127;24128;24129;24130;24131;24132;24133;24134;24135;24136;24137;24138;24139;24140;24141 26159;26160;26161;26162;26163;26164;26165;26166;26167;26168;26169;26170;26171;26172;26173;26174;26175;26176;26177;26178;26179;26180;26181;26182 26166 24 TAVVVGTITDDVR Unmodified 1344.7249 0.72489436 190 Q07020;G3V203;J3QQ67;H0YHA7;F8VWC5;F8VUA6;F8VYV2 RPL18 60S ribosomal protein L18 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 3 1 1 2 61.602 61.208 2 1.1267E-33 16106 Miao_Sh-H9_proteinG_mass3_141226_02 172.33 130 69859 2020.2 0 3372.4 7649.6 0 15569 0 0 0 17483 11254 12510 2604 190 2553 24142;24143;24144;24145;24146;24147;24148;24149;24150;24151;24152 26183;26184;26185;26186;26187;26188;26189;26190;26191;26192;26193 26189 11 TAWGQQPDLAANEAQLLR Unmodified 1981.0017 0.0017379196 146 Q9UNM6;E9PL38;J3KNQ3;Q9UNM6-2;H0YD73 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 80.008 79.306 3 0.039795 16687 Miao_Sh-H9_Flag_mass3_141226_02 33.071 22.456 0 0 0 0 0 0 0 0 0 0 0 0 0 2605 146 2554 24153 26194 26194 1 TCTTVAFTQVNSEDK Unmodified 1699.7723 0.77231483 509 P62424;Q5T8U2 RPL7A 60S ribosomal protein L7a yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 2 1 1 1 1 2 2 3 51.898 53.101 2;3 2.1213E-117 12243 Miao_Sh-H9_proteinG_mass3_141226_03 216.34 182.34 22899 809.14 4324.3 1535.3 1850.6 647.31 0 0 3419 0 5218.6 5095.2 0 2606 509 2555 24154;24155;24156;24157;24158;24159;24160;24161;24162;24163;24164;24165;24166;24167;24168;24169 26195;26196;26197;26198;26199;26200;26201;26202;26203;26204;26205 26204 11 TDAAVSFAK Acetyl (Protein N-term) 950.47091 0.4709115 322 P05141 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 1 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 2 1 1 1 56.66 58.013 2 0.0020996 8699 Miao_Sh-H9_Flag_mass3_141226_03 86.18 57.962 17998 1029.3 1246.7 0 0 0 831.85 619.37 0 3640.3 4808.8 4516.1 1305.4 2607 322 2556 24170;24171;24172;24173;24174;24175;24176;24177;24178 26206;26207;26208;26209;26210;26211;26212 26209 7 TDDEVVQR Unmodified 960.45124 0.45123869 369 P14625;F8VPC7 HSP90B1 Endoplasmin yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching 2 1 1 1 1 1 1 2 1 27.877 28.539 2 0.00042114 2617 Miao_Sh-c_proteinG_mass3_141226_02 134.48 74.001 2792.5 115.28 314.74 0 218.37 826.2 0 20.344 29.035 282.96 0 844.28 141.28 2608 369 2557 24179;24180;24181;24182;24183;24184;24185;24186;24187;24188;24189 26213;26214;26215;26216 26215 4 TDDEVVQREEEAIQLDGLNASQIR Unmodified 2727.3311 0.33113014 369 P14625 HSP90B1 Endoplasmin yes yes 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 104.41 95.383 3 1.038E-05 32990 Miao_Sh-H9_proteinG_mass3_141226_02 56.681 46.732 2516 0 0 0 0 0 0 0 0 0 0 2516 0 2609 369 2558 24190 26217 26217 1 TDLLLEPYNK Unmodified 1204.634 0.63395408 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 1 2 1 2 2 2 1 62.8 64.375 2 2.0519E-101 18048 Miao_Sh-H9_proteinG_mass3_141226_01 233.09 158.92 247800 6696.6 0 6684.1 20909 14949 35938 11890 0 12908 49950 47721 40160 2610 433 2559 24191;24192;24193;24194;24195;24196;24197;24198;24199;24200;24201;24202;24203;24204;24205;24206;24207 26218;26219;26220;26221;26222;26223;26224;26225;26226;26227;26228;26229;26230;26231;26232;26233;26234;26235;26236;26237;26238;26239;26240;26241;26242;26243;26244;26245;26246;26247;26248;26249;26250;26251;26252 26243 35 TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHK Unmodified 2980.1953 0.19525838 371 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 29.943 30.394 4 0.0019577 6250 Miao_Sh-H9_proteinG_mass3_141226_01 26.669 24.851 1034 0 0 0 0 0 0 0 0 0 1034 0 0 2611 371 2560 24208 26253 26253 1 TDTLEDLFPTTK Unmodified 1379.682 0.68202649 364 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching 2 1 1 1 2 1 86.172 80.165 2 0.0048779 29427 Miao_Sh-H9_proteinG_mass3_141226_01 73.881 58.017 12464 0 0 0 7362.5 0 0 1705.6 0 0 1448 948.2 1000.1 2612 364 2561 24209;24210;24211;24212;24213;24214;24215;24216 26254;26255;26256;26257;26258 26257 5 TDYNASVSVPDSSGPER Unmodified 1779.7911 0.79113602 494 P61978;P61978-2;Q5T6W5;P61978-3;Q5T6W2 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 5 1 2 2 3 47.15 50.343 2;3 4.0275E-106 12643 Miao_Sh-H9_proteinG_mass3_141226_01 207.05 183.54 18745 829.61 0 109.91 0 0 5327.5 0 0 0 0 3554.6 8923.6 2613 494 2562 24217;24218;24219;24220;24221;24222;24223;24224;24225;24226;24227;24228;24229;24230;24231;24232;24233;24234 26259;26260;26261;26262;26263;26264;26265;26266;26267;26268;26269;26270;26271;26272;26273;26274 26268 16 TEAESWYQTK Unmodified 1241.5564 0.55643205 105 P13647;CON__P13647;H0YI76;H0YIN9 KRT5 Keratin, type II cytoskeletal 5 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 45.776 49.084 2 0.0026303 11969 Miao_Sh-H9_proteinG_mass3_141226_01 106.35 78.149 0 0 0 0 0 0 0 0 0 0 0 0 0 + 2614 105 2563 24235;24236;24237 26275;26276;26277 26276 3 TEEEEIDR Unmodified 1019.4407 0.44073359 155 Q13435;E9PPJ0;H0YEX5 SF3B2 Splicing factor 3B subunit 2 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 1 27.557 29.337 2 0.00014487 2899 Miao_Sh-c_Flag_mass3_141226_03 118.5 77.809 839 45.839 39.854 0 0 33.022 349.58 0 331.98 0 0 38.716 0 2615 155 2564 24238;24239;24240;24241;24242;24243;24244 26278;26279 26278 2 TEELKPQVEEK Unmodified 1328.6824 0.68236084 668 Q9UN86;Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 32.905 35.483 3 0.013873 6764 Miao_Sh-H9_proteinG_mass3_141226_02 64.82 35.077 3282.4 0 0 0 0 0 1003.9 0 0 0 436.8 962.82 878.81 2616 668 2565 24245;24246;24247;24248 26280;26281 26281 2 TEIIILATR Unmodified 1028.623 0.62299547 402 P23396;F2Z2S8;H0YCJ7;E9PPU1;E9PL09;P23396-2;H0YF32;E9PQ96;E9PJH4;E9PK82;H0YEU2 RPS3 40S ribosomal protein S3 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 2 3 1 1 1 1 1 1 1 1 71.465 69.866 2 0.00043019 10625 Miao_Sh-c_Flag_mass3_141226_03 107.08 54.395 26530 0 2612.2 1101.6 3411 106.34 1443.7 0 5485.8 4770.3 6558.8 1039.9 0 2617 402 2566 24249;24250;24251;24252;24253;24254;24255;24256;24257;24258;24259;24260;24261 26282;26283;26284;26285;26286;26287;26288;26289;26290;26291;26292;26293 26285 12 TEILPPFFK Unmodified 1090.6063 0.60628277 294 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 85.982 85.531 2 0.041955 18875 Miao_Sh-H9_Flag_mass3_141226_03 57.59 35.597 0 0 0 0 0 0 0 0 0 0 0 0 0 2618 294 2567 24262 26294 26294 1 TELDSFLIEITANILK Unmodified 1818.9979 0.99788132 35 P52209;F5H7U0;B4DQJ8;K7EPF6;K7ELN9 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 2 1 1 121.7 122.01 3 3.288E-06 29400 Miao_Sh-c_Flag_mass3_141226_01 82.578 69.144 33425 8093.7 5051.3 4955.9 5127.7 0 0 4101.3 6095.5 0 0 0 0 2619 35 2568 24263;24264;24265;24266;24267;24268;24269 26295;26296;26297;26298;26299;26300;26301 26295 7 TELEDTLDSTAAQQELR Unmodified 1918.912 0.91197944 433 P35579 MYH9 Myosin-9 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 2 3 2 2 2 2 9 2 20 69.883 67.73 2;3 0 23516 Miao_Sh-H9_proteinG_mass3_141226_02 314.35 268.03 465790 18488 16693 21235 65777 31092 55743 39375 32560 0 103410 61745 19670 2620 433 2569 24270;24271;24272;24273;24274;24275;24276;24277;24278;24279;24280;24281;24282;24283;24284;24285;24286;24287;24288;24289;24290;24291;24292;24293;24294;24295;24296;24297;24298;24299;24300;24301;24302;24303;24304;24305;24306;24307;24308;24309;24310;24311;24312;24313;24314;24315;24316;24317;24318;24319;24320 26302;26303;26304;26305;26306;26307;26308;26309;26310;26311;26312;26313;26314;26315;26316;26317;26318;26319;26320;26321;26322;26323;26324;26325;26326;26327;26328;26329;26330;26331;26332;26333;26334;26335;26336;26337;26338;26339;26340;26341;26342;26343;26344;26345;26346;26347;26348;26349;26350;26351;26352;26353;26354;26355;26356;26357;26358;26359;26360;26361;26362;26363;26364;26365;26366;26367;26368;26369;26370;26371;26372;26373;26374;26375;26376;26377;26378;26379;26380;26381;26382;26383;26384;26385;26386;26387;26388;26389;26390;26391;26392;26393;26394;26395;26396;26397;26398;26399;26400;26401;26402;26403;26404;26405;26406;26407;26408;26409;26410;26411 26372 110 TELEDTLDTTAAQQELR Unmodified 1932.9276 0.9276295 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 4 1 2 1 2 3 16 9 5 68.747 68.382 2;3 5.9175E-106 23796 Miao_Sh-H9_proteinG_mass3_141226_02 204.26 178.29 68233 5019.8 738.68 0 0 10020 16240 4546.2 0 0 11972 3967.6 15729 2621 434 2570 24321;24322;24323;24324;24325;24326;24327;24328;24329;24330;24331;24332;24333;24334;24335;24336;24337;24338;24339;24340;24341;24342;24343;24344;24345;24346;24347;24348;24349;24350;24351;24352;24353;24354;24355;24356;24357;24358;24359;24360;24361;24362;24363;24364;24365;24366;24367;24368 26412;26413;26414;26415;26416;26417;26418;26419;26420;26421;26422;26423;26424;26425;26426;26427;26428;26429;26430;26431;26432;26433;26434;26435;26436;26437;26438;26439;26440;26441;26442;26443;26444;26445;26446;26447;26448;26449;26450;26451;26452;26453;26454;26455;26456;26457;26458;26459;26460;26461;26462;26463;26464;26465;26466;26467;26468;26469;26470 26458 59 TEWETAAPAVAETPDIK Acetyl (Protein N-term) 1869.8996 0.89962384 256 P46782;M0R0F0;M0R0R2;M0QZN2 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes no 1 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 4 2 1 3 83.116 77.179 2;3 1.8774E-09 16905 Miao_Sh-H9_Flag_mass3_141226_03 90.379 72.289 31410 3813.2 0 3540.8 3226.3 0 0 4961.6 0 5817.4 3690.6 3553.8 2805.9 2622 256 2571 24369;24370;24371;24372;24373;24374;24375;24376;24377;24378;24379;24380;24381;24382;24383;24384 26471;26472;26473;26474;26475;26476;26477;26478;26479;26480;26481;26482;26483;26484;26485;26486;26487;26488;26489;26490 26479 19 TFAPEEISAMVLTK Unmodified 1535.7905 0.79053108 355 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 2 1 1 2 1 93.865 90.487 2;3 2.425E-05 18262 Miao_Sh-c_Flag_mass3_141226_02 108.97 91.305 24941 1774.6 2245.8 2118.7 0 0 0 8055.9 5737.1 3076.8 782.77 1149.5 0 2623 355 2572 24385;24386;24387;24388;24389;24390;24391;24392;24393;24394;24395 26491;26492;26493;26494;26495;26496;26497;26498;26499;26500;26501 26494 11 TFDQLTPDESK Unmodified 1279.5932 0.59321148 579 Q15293 RCN1 Reticulocalbin-1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 1 43.849 45.988 2 0.055066 12110 Miao_Sh-H9_proteinG_mass3_141226_01 50.286 39.122 3259.4 0 66.098 111.39 31.825 0 1325.4 0 0 0 1412.5 312.13 0 2624 579 2573 24396;24397;24398;24399;24400;24401 26502 26502 1 TFDQLTPEESK Unmodified 1293.6089 0.60886155 285 O43852-14;O43852-3;O43852;O43852-4;O43852-13;O43852-9;O43852-11;O43852-10;O43852-5;O43852-6;O43852-12;O43852-7;O43852-8;O43852-2 CALU Calumenin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 45.945 49.002 2 0.0034976 11187 Miao_Sh-H9_proteinG_mass3_141226_03 90.861 66.771 0 0 0 0 0 0 0 0 0 0 0 0 0 2625 285 2574 24402 26503 26503 1 TFEEAAAQLLESSVQNLFK Unmodified 2124.0739 0.07389981 665 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 121.36 122.01 3 0.0030639 32253 Miao_Sh-H9_Flag_mass3_141226_03 46.925 38.264 0 0 0 0 0 0 0 0 0 0 0 0 0 2626 665 2575 24403 26504 26504 1 TFEINPR Unmodified 875.45012 0.45011648 369 P14625;Q58FF3;H0YIV0 HSP90B1;HSP90B2P Endoplasmin;Putative endoplasmin-like protein yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 40.564 46.929 2 0.017818 10020 Miao_Sh-c_proteinG_mass3_141226_03 91.626 53.899 0 0 0 0 0 0 0 0 0 0 0 0 0 2627 369 2576 24404 26505 26505 1 TFHIFYQLLSGAGEHLK Unmodified 1960.0207 0.020682448 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS 2 1 1 2 1 2 1 2 3 87.498 83.885 3;4 0.00010721 38589 Miao_Sh-H9_proteinG_mass3_141226_01 68.845 60.048 47011 3512.3 1128.8 0 4146.9 4999.9 503.23 0 0 2529.5 8734.2 11770 9686.9 2628 434 2577 24405;24406;24407;24408;24409;24410;24411;24412;24413;24414;24415;24416;24417;24418;24419 26506;26507;26508;26509;26510;26511;26512;26513;26514;26515 26513 10 TFHIFYYLLSGAGEHLK Unmodified 1995.0254 0.025433475 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 2 4 2 1 2 1 1 4 2 96.529 93.246 3;4 1.2759E-09 40023 Miao_Sh-H9_proteinG_mass3_141226_01 93.777 77.933 163030 8568.7 11767 13113 19024 11651 0 9150.6 8139.7 7665.3 16913 0 57033 2629 433 2578 24420;24421;24422;24423;24424;24425;24426;24427;24428;24429;24430;24431;24432;24433;24434;24435;24436;24437;24438;24439 26516;26517;26518;26519;26520;26521;26522;26523;26524;26525;26526;26527;26528;26529;26530;26531;26532;26533;26534;26535;26536;26537;26538;26539;26540;26541;26542;26543;26544;26545;26546;26547;26548;26549;26550;26551;26552;26553;26554;26555;26556;26557;26558;26559;26560;26561;26562 26554 47 TFIAIKPDGVQR Unmodified 1343.7561 0.75613491 374 P15531;P15531-2;E7ERL0;J3KPD9;C9K028;E5RHP0 NME1;NME2 Nucleoside diphosphate kinase A no no 0 0 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 2 1 1 2 1 60.242 58.365 3 0.00048402 6828 Miao_Sh-c_proteinG_mass3_141226_01 105.46 74.571 25550 0 2564.2 1570.8 2600.5 0 4301.6 0 3094 3914.3 7504.8 0 0 2630 374 2579 24440;24441;24442;24443;24444;24445;24446;24447;24448;24449;24450;24451 26563;26564;26565;26566;26567;26568;26569;26570;26571;26572;26573;26574;26575 26567 13 TFLVGER Unmodified 820.4443 0.44430282 417 P26641;B4DTG2 EEF1G Elongation factor 1-gamma yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 49.839 49.789 2 0.031817 6643 Miao_Sh-H9_Flag_mass3_141226_03 73.616 26.535 0 0 0 0 0 0 0 0 0 0 0 0 0 2631 417 2580 24452 26576 26576 1 TFNPGAGLPTDK Unmodified 1216.6088 0.60880197 215 P09661;H0YMA0;H0YLR3 SNRPA1 U2 small nuclear ribonucleoprotein A' yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 2 3 52.622 54.231 2 0.0010411 12556 Miao_Sh-c_proteinG_mass3_141226_03 81.904 46.362 12204 227.91 0 0 594.19 0 0 1060.8 1670.5 0 0 3688.4 4962.6 2632 215 2581 24453;24454;24455;24456;24457;24458;24459;24460;24461;24462;24463 26577;26578;26579;26580;26581 26577 5 TFNTSTGGLLLPSDTK Unmodified 1650.8465 0.84646606 363 P12956;B1AHC8;B1AHC9;F5H1I8 XRCC6 X-ray repair cross-complementing protein 6 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 1 67.039 68.901 2 9.2265E-05 19880 Miao_Sh-H9_proteinG_mass3_141226_01 72.433 54.417 9671.9 502.79 0 810.37 0 1286.5 1852.5 0 1103.3 0 1332.8 1620.7 1162.9 2633 363 2582 24464;24465;24466;24467;24468;24469;24470;24471 26582;26583;26584 26582 3 TFSFAIPLIEK Unmodified 1264.7067 0.7067251 652 Q9NR30;Q9NR30-2 DDX21 Nucleolar RNA helicase 2 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 94.812 96.165 2 0.0029913 22671 Miao_Sh-c_proteinG_mass3_141226_01 81.92 66.659 0 0 0 0 0 0 0 0 0 0 0 0 0 2634 652 2583 24472 26585 26585 1 TFSWASVTSK Unmodified 1112.5502 0.55022446 561 Q13283;F5H4D6 G3BP1 Ras GTPase-activating protein-binding protein 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 66.527 66.878 2 0.032542 19006 Miao_Sh-H9_proteinG_mass3_141226_01 57.225 30.842 0 0 0 0 0 0 0 0 0 0 0 0 0 2635 561 2584 24473 26586 26586 1 TFVNITPAEVGVLVGK Unmodified 1642.9294 0.92940782 339 P07737;I3L3D5 PFN1 Profilin-1 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 1 2 2 2 3 3 4 4 2 7 5 99.554 94.661 2;3 1.7873E-22 21282 Miao_Sh-H9_Flag_mass3_141226_02 155.88 133.3 222970 19643 8310.1 21330 21474 17511 39521 1012.6 36196 1161.5 26643 6256.8 23911 2636 339 2585 24474;24475;24476;24477;24478;24479;24480;24481;24482;24483;24484;24485;24486;24487;24488;24489;24490;24491;24492;24493;24494;24495;24496;24497;24498;24499;24500;24501;24502;24503;24504;24505;24506;24507;24508;24509;24510;24511 26587;26588;26589;26590;26591;26592;26593;26594;26595;26596;26597;26598;26599;26600;26601;26602;26603;26604;26605;26606;26607;26608;26609;26610;26611;26612;26613;26614;26615;26616;26617;26618;26619;26620;26621;26622;26623;26624;26625;26626;26627;26628;26629;26630;26631;26632;26633;26634;26635;26636;26637;26638;26639;26640;26641;26642;26643;26644;26645;26646;26647;26648;26649;26650;26651;26652;26653;26654;26655;26656;26657;26658;26659;26660;26661;26662;26663 26620 77 TFVQELER Unmodified 1020.524 0.52400971 227 Q92614;Q92614-4;J3KNX9;Q92614-3;Q92614-5;Q92614-2 MYO18A Unconventional myosin-XVIIIa yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 57.524 59.93 2 0.012247 15795 Miao_Sh-H9_proteinG_mass3_141226_02 85.67 46.878 0 0 0 0 0 0 0 0 0 0 0 0 0 2637 227 2586 24512 26664 26664 1 TGAAPIIDVVR Unmodified 1110.6397 0.63970816 145 P46776;E9PJD9;E9PLL6;E9PLX7 RPL27A 60S ribosomal protein L27a yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 2 1 1 1 1 61.121 62.209 2 1.1338E-30 17052 Miao_Sh-H9_proteinG_mass3_141226_01 176.62 122.52 87034 5508.2 4043.1 3785.8 9249.4 0 656.26 7092.9 7566.9 6943.8 26874 0 15314 2638 145 2587 24513;24514;24515;24516;24517;24518;24519;24520;24521;24522;24523 26665;26666;26667;26668;26669;26670;26671;26672;26673;26674;26675;26676;26677;26678;26679;26680;26681;26682;26683;26684;26685 26679 21 TGAFSIPVIQIVYETLK Unmodified 1878.0503 0.050251242 622 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 117.68 118.03 3 0.018484 31701 Miao_Sh-c_proteinG_mass3_141226_01 40.186 32.272 0 0 0 0 0 0 0 0 0 0 0 0 0 2639 622 2588 24524 26686 26686 1 TGAIVDVPVGEELLGR Unmodified 1623.8832 0.88318591 410 P25705;P25705-2;K7EK77;K7ERX7;K7EJP1;K7EQH4 ATP5A1 ATP synthase subunit alpha, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 1 3 4 1 2 1 1 91.818 83.949 2;3 5.0935E-06 30795 Miao_Sh-c_proteinG_mass3_141226_03 84.508 50.981 4074 0 0 0 2509.3 0 0 0 0 0 0 0 1564.7 2640 410 2589 24525;24526;24527;24528;24529;24530;24531;24532;24533;24534;24535;24536;24537 26687;26688;26689;26690;26691;26692;26693;26694;26695;26696;26697;26698 26689 12 TGAQELLR Unmodified 886.48723 0.48723027 329 P06396;P06396-2;P06396-4;P06396-3;Q5T0H9;Q5T0H7;Q5T0H8 GSN Gelsolin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 1 1 41.667 43.057 2 0.01398 8899 Miao_Sh-c_proteinG_mass3_141226_03 85.676 31.519 11054 0 347.5 289.94 0 0 1897 0 381.35 174.46 3057.5 4906 0 + 2641 329 2590 24538;24539;24540;24541;24542;24543;24544;24545 26699;26700 26699 2 TGEAIVDAALSALR Unmodified 1385.7514 0.75144346 57 Q15084;Q15084-3;F8WA83;B5MCQ5;Q15084-2 PDIA6 Protein disulfide-isomerase A6 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 105.1 99.687 2 2.7161E-05 36779 Miao_Sh-H9_proteinG_mass3_141226_01 97.45 76.078 0 0 0 0 0 0 0 0 0 0 0 0 0 2642 57 2591 24546;24547 26701;26702 26702 2 TGISDVFAK Unmodified 936.49165 0.49164694 389 P19338 NCL Nucleolin yes yes 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 56.687 59.281 2 2.603E-07 15021 Miao_Sh-H9_proteinG_mass3_141226_03 145.46 81.927 29620 0 0 1090.6 0 0 9118.6 0 0 0 11419 0 7991.9 2643 389 2592 24548;24549;24550;24551 26703;26704;26705;26706;26707 26706 5 TGTAYTFFTPNNIK Unmodified 1573.7777 0.77765821 34 P17844;J3KTA4;B4DLW8 DDX5 Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 72.315 71.496 2 1.8903E-06 20156 Miao_Sh-c_proteinG_mass3_141226_03 116.63 97.436 0 0 0 0 0 0 0 0 0 0 0 0 0 2644 34 2593 24552;24553;24554 26708;26709;26710 26708 3 TGVHHYSGNNIELGTACGK Unmodified 2013.9327 0.93267208 122 P62888;E5RI99 RPL30 60S ribosomal protein L30 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 2 2 1 3 2 2 1 1 1 4 39.632 41.065 2;3;4 6.2977E-12 4276 Miao_Sh-H9_Flag_mass3_141226_02 112.82 77.858 39321 0 790.57 551.29 1744.3 497.97 9194.6 659.86 2224 1822.3 8003.1 7157.1 6676.3 2645 122 2594 24555;24556;24557;24558;24559;24560;24561;24562;24563;24564;24565;24566;24567;24568;24569;24570;24571;24572;24573;24574;24575;24576 26711;26712;26713;26714;26715;26716;26717;26718;26719;26720;26721;26722;26723;26724;26725;26726;26727;26728;26729;26730;26731;26732;26733;26734;26735;26736 26730 25 TGYTLDVTTGQR Unmodified 1310.6466 0.64664404 286;281 O60506-4;O60506-3;O60506;O60506-2;F6UXX1;O43390;O43390-2;O43390-4;E7ETM7 SYNCRIP;HNRNPR Heterogeneous nuclear ribonucleoprotein Q;Heterogeneous nuclear ribonucleoprotein R no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 51.325 52.01 2 0.00018318 12421 Miao_Sh-H9_proteinG_mass3_141226_03 123.26 92.692 6576.6 127.3 0 0 0 0 0 0 554.33 0 0 0 5895 2646 286;281 2595 24577;24578;24579 26737 26737 1 THINIVVIGHVDSGK Unmodified 1587.8733 0.87328993 527 P68104;Q5VTE0;Q05639;A6PW80;Q5JR01 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 2 yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 3 1 1 2 6 1 5 2 7 76.079 70.502 3;4 1.6831E-08 34885 Miao_Sh-H9_proteinG_mass3_141226_03 104.21 91.198 36158 244.13 2001.6 2000.2 3688.6 0 0 3064.5 0 0 15764 4392.6 5002.2 2647 527 2596 24580;24581;24582;24583;24584;24585;24586;24587;24588;24589;24590;24591;24592;24593;24594;24595;24596;24597;24598;24599;24600;24601;24602;24603;24604;24605;24606;24607 26738;26739;26740;26741;26742;26743;26744;26745;26746;26747;26748;26749;26750;26751;26752;26753;26754;26755;26756;26757;26758;26759;26760;26761;26762;26763;26764;26765;26766;26767;26768;26769;26770;26771;26772;26773;26774;26775;26776;26777;26778 26775 40 THNLEPYFESFINNLR Unmodified 1992.9694 0.96937516 314 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 2 8 2 4 1 1 1 3 5 110.26 106.21 2;3;4 1.9609E-153 40024 Miao_Sh-H9_proteinG_mass3_141226_02 246.66 209.3 427750 3758.9 453.95 1138.6 48154 70607 72676 436.79 7331.8 0 118920 104280 0 + 2648 314 2597 24608;24609;24610;24611;24612;24613;24614;24615;24616;24617;24618;24619;24620;24621;24622;24623;24624;24625;24626;24627;24628;24629;24630;24631;24632;24633;24634;24635;24636 26779;26780;26781;26782;26783;26784;26785;26786;26787;26788;26789;26790;26791;26792;26793;26794;26795;26796;26797;26798;26799;26800;26801;26802;26803;26804;26805;26806;26807;26808;26809;26810;26811;26812;26813;26814;26815;26816;26817;26818;26819;26820;26821;26822;26823;26824;26825;26826;26827;26828;26829 26819 51 THNLEPYFESFINNLRR Unmodified 2149.0705 0.070486187 314 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 0 1 By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 97.58 92.828 4 5.842E-07 26832 Miao_Sh-H9_proteinG_mass3_141226_03 83.37 72.64 12720 0 0 0 2015.4 1490.5 0 0 655.99 0 5335 0 3223.3 + 2649 314 2598 24637;24638;24639;24640;24641 26830;26831;26832;26833;26834;26835;26836 26835 5 TIAIIAEGIPEALTR Unmodified 1566.8981 0.8981077 476 P53396;P53396-2;B4E3P0 ACLY ATP-citrate synthase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 93.889 89.465 2 0.0006079 20100 Miao_Sh-H9_Flag_mass3_141226_01 71.531 60.585 3528.4 431.05 281.03 0 0 0 0 1978.2 0 0 0 0 838.16 2650 476 2599 24642;24643;24644;24645 26837 26837 1 TIALNGVEDVR Unmodified 1185.6354 0.63535107 255 Q3ZCQ8;M0R0C3;M0R2F8;Q3ZCQ8-3;Q3ZCQ8-2 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 55.562 58.419 2 0.006756 14726 Miao_Sh-H9_proteinG_mass3_141226_03 71.219 45.156 0 0 0 0 0 0 0 0 0 0 0 0 0 2651 255 2600 24646 26838 26838 1 TIAPALVSK Unmodified 898.54877 0.54876789 333 P06733;K7EM90 ENO1 Alpha-enolase;Enolase yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1 2 1 44.732 46.267 2 0.001887 10767 Miao_Sh-H9_proteinG_mass3_141226_02 101.82 70.528 118430 4244.6 3518.2 3718.5 0 1268.2 27737 4968.2 4606.4 4767.3 23958 22582 17065 2652 333 2601 24647;24648;24649;24650;24651;24652;24653;24654;24655;24656;24657;24658 26839;26840;26841;26842;26843;26844;26845;26846;26847;26848;26849;26850;26851;26852;26853;26854 26849 16 TIAPCQK Unmodified 816.41637 0.41637351 441 P38646;H0YBG6 HSPA9 Stress-70 protein, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 27.336 27.787 2 0.043982 5758 Miao_Sh-H9_proteinG_mass3_141226_01 68.485 40.378 0 0 0 0 0 0 0 0 0 0 0 0 0 2653 441 2602 24659 26855 26855 1 TIAQDYGVLK Unmodified 1106.5972 0.59717465 545 Q06830 PRDX1 Peroxiredoxin-1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 55.236 57.249 2 0.0088014 13833 Miao_Sh-c_proteinG_mass3_141226_03 78.342 29.74 20204 0 0 1172.4 986.79 0 5488.8 0 0 1443.3 6823.8 0 4288.9 2654 545 2603 24660;24661;24662;24663;24664;24665;24666 26856;26857;26858;26859;26860;26861;26862 26857 7 TIDDLEDK Unmodified 947.44476 0.44475633 335;226 P06753-2;Q5VU59;P06753-5;Q5VU61;P06753-7;J3KN67 TPM3 Tropomyosin alpha-3 chain no no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 38.058 39.632 2 0.050173 3823 Miao_Sh-c_proteinG_mass3_141226_01 65.224 33.935 2296.9 106.62 0 225.45 216.32 0 1444.2 0 0 304.31 0 0 0 2655 335;226 2604 24667;24668;24669;24670;24671 26863 26863 1 TIDDLEETLASAK Unmodified 1404.6984 0.69840484 342 P07951-2;Q5TCU3;P07951-3 TPM2 Tropomyosin beta chain yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 3 1 1 2 1 72.77 73.98 2;3 2.0449E-06 21711 Miao_Sh-H9_proteinG_mass3_141226_01 128.35 91.684 12371 890.34 1335.4 610.22 0 0 1625.6 1178.1 0 0 6278.1 453.72 0 + 2656 342 2605 24672;24673;24674;24675;24676;24677;24678;24679;24680;24681;24682 26864;26865;26866;26867;26868;26869 26867 6 TIGGGDDSFNTFFSETGAGK Unmodified 2006.8858 0.88576469 529 P68363 TUBA1B Tubulin alpha-1B chain no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 6 6 1 1 3 2 4 4 18 7 10 87.873 84.015 2;3 9.1704E-155 15954 Miao_Sh-c_Flag_mass3_141226_02 225.29 184.79 283660 33778 13669 29657 16095 12168 11155 61184 67038 19134 0 9877.1 9907.3 2657 529 2606 24683;24684;24685;24686;24687;24688;24689;24690;24691;24692;24693;24694;24695;24696;24697;24698;24699;24700;24701;24702;24703;24704;24705;24706;24707;24708;24709;24710;24711;24712;24713;24714;24715;24716;24717;24718;24719;24720;24721;24722;24723;24724;24725;24726;24727;24728;24729;24730;24731;24732;24733;24734;24735;24736;24737;24738;24739;24740;24741;24742;24743;24744;24745;24746 26870;26871;26872;26873;26874;26875;26876;26877;26878;26879;26880;26881;26882;26883;26884;26885;26886;26887;26888;26889;26890;26891;26892;26893;26894;26895;26896;26897;26898;26899;26900;26901;26902;26903;26904;26905;26906;26907;26908;26909;26910;26911;26912;26913;26914;26915;26916;26917;26918;26919;26920;26921;26922;26923;26924;26925;26926;26927;26928;26929;26930;26931;26932;26933;26934;26935;26936;26937;26938;26939;26940;26941;26942;26943;26944;26945;26946;26947;26948;26949;26950;26951;26952;26953;26954;26955;26956;26957;26958;26959;26960;26961;26962;26963;26964;26965;26966;26967;26968;26969 26890 100 TIGISVDPR Unmodified 956.5291 0.52909508 414 P26373;J3QSB4 RPL13 60S ribosomal protein L13 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 1 1 1 1 1 1 1 2 2 50.948 52.417 2 0.00014149 12210 Miao_Sh-H9_proteinG_mass3_141226_03 126.31 44.034 244790 4835.9 5922.7 4196.2 3985.2 0 43027 6953 8807.7 7988.4 58226 54953 45891 2658 414 2607 24747;24748;24749;24750;24751;24752;24753;24754;24755;24756;24757;24758;24759;24760 26970;26971;26972;26973;26974;26975;26976;26977;26978;26979;26980;26981;26982;26983;26984;26985;26986;26987;26988;26989;26990 26989 21 TIIQNPTDQQK Unmodified 1284.6674 0.66737948 669 Q9UQ80;F8VR77 PA2G4 Proliferation-associated protein 2G4 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 2 1 1 1 39.868 41.209 2 0.0028086 7725 Miao_Sh-c_proteinG_mass3_141226_03 107.34 89.524 4707.4 0 0 0 0 0 2002.5 0 104.04 592.13 2008.7 0 0 2659 669 2608 24761;24762;24763;24764;24765 26991;26992 26992 2 TIIYGSSSR Unmodified 982.50836 0.50835964 90 CON__ENSEMBL:ENSBTAP00000014147 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 36.429 38.083 2 0.027331 8174 Miao_Sh-H9_proteinG_mass3_141226_01 67.113 31.818 1478.3 0 0 0 0 0 0 0 0 0 832.13 0 646.19 + 2660 90 2609 24766;24767 26993 26993 1 TIIYGSSSRPSGVPDR Unmodified 1690.8638 0.86384745 90 CON__ENSEMBL:ENSBTAP00000014147 yes yes 0 0 0 0 1 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 7 44.203 47.32 3 4.0321E-09 10574 Miao_Sh-H9_proteinG_mass3_141226_03 98.943 63.983 29340 0 0 0 2724.9 3250.3 9249.7 0 0 0 8468.1 5055.3 591.46 + 2661 90 2610 24768;24769;24770;24771;24772;24773;24774;24775;24776;24777;24778;24779 26994;26995;26996;26997;26998;26999;27000;27001;27002;27003;27004 26999 10 TIIYGSSSRPSGVPDRFSGSK Unmodified 2197.1127 0.11274493 90 CON__ENSEMBL:ENSBTAP00000014147 yes yes 0 0 0 0 2 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 49.425 51.069 4 0.039441 13217 Miao_Sh-H9_proteinG_mass3_141226_01 29.729 6.2724 5127.6 0 141.16 528.91 1013.9 1391.7 0 0 0 0 2051.9 0 0 + 2662 90 2611 24780;24781;24782;24783;24784 27005 27005 0 TILSNQTVDIPENVDITLK Unmodified 2112.1314 0.13141469 117 P32969;D6RAN4;E7ESE0 RPL9 60S ribosomal protein L9 yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 3 2 3 90.028 82.225 2;3 6.8005E-08 18061 Miao_Sh-H9_Flag_mass3_141226_01 77.08 56.996 47295 0 695.4 2376.9 8775.2 0 0 5476.5 0 0 2557.4 6467.4 20947 2663 117 2612 24785;24786;24787;24788;24789;24790;24791;24792;24793;24794;24795;24796;24797 27006;27007;27008;27009;27010;27011;27012;27013;27014;27015;27016;27017;27018 27008 13 TINEVENQILTR Unmodified 1428.7573 0.75725712 283;362 O43707;O43707-2;F5GXS2;O43707-3;H7C144;H0YJ11;H0YJW3;P12814;P12814-2;P12814-3;P12814-4;H9KV75;H7C5W8 ACTN4;ACTN1 Alpha-actinin-4;Alpha-actinin-1 no no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching 1 3 1 2 1 2 63.871 66.134 2;3 1.0593E-10 11576 Miao_Sh-c_proteinG_mass3_141226_01 148.89 91.359 18377 1713.2 2337.8 0 3414.5 0 10912 0 0 0 0 0 0 2664 283;362 2613 24798;24799;24800;24801;24802;24803;24804;24805;24806;24807 27019;27020;27021;27022;27023;27024;27025;27026 27021 8 TIPSWATLSASQLAR Unmodified 1600.8573 0.85730551 593 Q5SSJ5;X6RGJ2;Q5SWC8;Q5SSJ5-2;B0QZK4 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 83.035 84.463 3 0.0040019 17860 Miao_Sh-c_proteinG_mass3_141226_01 53.038 42.113 2320.2 0 0 600.62 1719.6 0 0 0 0 0 0 0 0 2665 593 2614 24808;24809 27027 27027 1 TITGFQTHTTPVLLAHGER Unmodified 2078.0909 0.090887278 559 Q13200;E9PCS3;E7EW34 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 1 58.43 59.265 4 0.00024897 8273 Miao_Sh-c_Flag_mass3_141226_02 58.693 42.343 20291 0 2971.4 3167.6 0 1496.9 0 2929.2 3382 6343.7 0 0 0 2666 559 2615 24810;24811;24812;24813;24814;24815 27028;27029;27030 27028 3 TITLEVEPSDTIENVK Unmodified 1786.92 0.92002493 45;239 P0CG47;P62979;P62987;J3QS39;J3QTR3;F5H6Q2;F5GYU3;F5H2Z3;F5H265;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q96C32;F5H041;P0CG48;M0R1V7;F5GZ39;J3QLP7;J3QSA3;J3QRK5 UBB;RPS27A;UBA52;UBC;UBBP4 Polyubiquitin-B;Ubiquitin;Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-C;Ubiquitin no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 5 5 2 1 4 4 4 6 7 4 14 71.566 69.995 2;3 1.2356E-226 13706 Miao_Sh-H9_Flag_mass3_141226_02 268.18 226.56 4217600 773100 398210 3367 52703 15152 3647.5 1406600 682710 765710 54442 31436 30526 2667 45;239 2616 24816;24817;24818;24819;24820;24821;24822;24823;24824;24825;24826;24827;24828;24829;24830;24831;24832;24833;24834;24835;24836;24837;24838;24839;24840;24841;24842;24843;24844;24845;24846;24847;24848;24849;24850;24851;24852;24853;24854;24855;24856;24857;24858;24859;24860;24861;24862;24863;24864;24865;24866;24867;24868;24869;24870;24871;24872;24873;24874 27031;27032;27033;27034;27035;27036;27037;27038;27039;27040;27041;27042;27043;27044;27045;27046;27047;27048;27049;27050;27051;27052;27053;27054;27055;27056;27057;27058;27059;27060;27061;27062;27063;27064;27065;27066;27067;27068;27069;27070;27071;27072;27073;27074;27075;27076;27077;27078;27079;27080;27081;27082;27083;27084;27085;27086;27087;27088;27089;27090;27091;27092;27093;27094;27095;27096;27097;27098;27099;27100;27101;27102;27103;27104;27105;27106;27107;27108;27109;27110;27111;27112;27113;27114;27115;27116;27117;27118;27119;27120;27121;27122;27123;27124;27125 27076 95 TITLEVEPSDTIENVKAK GlyGly (K) 2100.095 0.095029182 45;239 P0CG47;P62979;P62987;J3QS39;J3QTR3;F5H6Q2;F5GYU3;F5H2Z3;F5H265;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q96C32;F5H041;P0CG48;M0R1V7;F5GZ39;J3QLP7;J3QSA3;J3QRK5 UBB;RPS27A;UBA52;UBC;UBBP4 Polyubiquitin-B;Ubiquitin;Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-C;Ubiquitin no no 0 1 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 3 2 1 3 4 2 64.459 65.84 3 1.6977E-30 11579 Miao_Sh-H9_Flag_mass3_141226_01 150.01 130.52 27444 3890 5805.4 4752.5 0 3337.3 0 0 0 1451.6 0 0 8206.8 2668 45;239 2617 24875;24876;24877;24878;24879;24880;24881;24882;24883;24884;24885;24886;24887;24888;24889;24890 27126;27127;27128;27129;27130;27131;27132;27133;27134;27135 27131 5;6 10 TIVYLDGSSQSCR Unmodified 1484.6929 0.6929423 393 P21589;P21589-2;H0Y7R7;H0Y3X5 NT5E 5'-nucleotidase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 51.148 52.803 2 0.043997 12951 Miao_Sh-H9_proteinG_mass3_141226_01 48.527 40.395 7836.2 0 0 0 0 0 0 0 0 0 2150 5686.2 0 2669 393 2618 24891;24892 27136 27136 1 TKPYIQVDIGGGQTK Unmodified 1603.857 0.85697116 355 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 4 1 1 2 1 2 2 2 2 2 1 53.031 53.958 2;3 4.3963E-05 13825 Miao_Sh-H9_proteinG_mass3_141226_01 105.06 72.901 105620 8390.2 5810.6 4136.2 0 0 10252 15866 14063 13552 16473 15284 1796.3 2670 355 2619 24893;24894;24895;24896;24897;24898;24899;24900;24901;24902;24903;24904;24905;24906;24907;24908;24909;24910;24911;24912 27137;27138;27139;27140;27141;27142;27143;27144;27145;27146;27147;27148;27149;27150;27151;27152;27153;27154;27155;27156;27157;27158 27158 22 TLAGLVVQLLQFQEDAFGK Unmodified 2076.1255 0.12554145 188 Q92922;F8WE13 SMARCC1 SWI/SNF complex subunit SMARCC1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 121.64 122.09 3 3.9797E-05 32574 Miao_Sh-H9_Flag_mass3_141226_03 64.346 51.969 0 0 0 0 0 0 0 0 0 0 0 0 0 2671 188 2620 24913;24914 27159;27160 27160 2 TLDLPIYVTR Unmodified 1189.6707 0.67067394 478 P53621;P53621-2 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 1 2 1 1 1 64.297 60.337 2 0.011905 22252 Miao_Sh-H9_proteinG_mass3_141226_03 73.885 42.391 4867.6 386.61 0 0 0 0 1550 0 0 0 721.56 860.33 1349 2672 478 2621 24915;24916;24917;24918;24919;24920 27161;27162 27162 2 TLEEAVGNIVK Unmodified 1171.6449 0.64485312 683 Q9Y678;H0Y8X7 COPG1 Coatomer subunit gamma-1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 73.549 67.835 2 0.04131 12524 Miao_Sh-H9_Flag_mass3_141226_01 53.237 24.28 2526.5 1108.2 0 0 0 0 320.67 943.15 0 0 0 154.44 0 2673 683 2622 24921;24922;24923;24924 27163 27163 1 TLEEDEEELFK Unmodified 1380.6297 0.62965657 78 P43487;C9JJ34;C9JDM3 RANBP1 Ran-specific GTPase-activating protein yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching 1 1 2 2 2 1 2 1 1 80 78.874 2 0.0029079 15127 Miao_Sh-c_proteinG_mass3_141226_02 83.182 63.058 17132 776.68 0 0 2399.1 2439.3 1116.5 2570.2 4928.1 900.86 0 2001.6 0 2674 78 2623 24925;24926;24927;24928;24929;24930;24931;24932;24933;24934;24935;24936;24937 27164;27165;27166;27167;27168 27165 5 TLEEEAK Unmodified 818.40216 0.40216323 433 P35579 MYH9 Myosin-9 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 26.154 27.067 2 0.030402 5884 Miao_Sh-H9_proteinG_mass3_141226_01 77.058 39.499 1702.6 13.194 0 0 181.41 0 0 0 0 0 1158.8 188 161.15 2675 433 2624 24938;24939;24940;24941;24942 27169 27169 0 TLEPQELAR Unmodified 1055.5611 0.56112349 619 Q8WWM7;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7-3;H3BUF6 ATXN2L Ataxin-2-like protein yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 43.927 47.236 2 0.0064311 11089 Miao_Sh-H9_proteinG_mass3_141226_03 82.645 58.423 4319.5 0 0 0 0 42.768 0 0 0 0 0 1704.9 2571.8 2676 619 2625 24943;24944;24945 27170 27170 1 TLETVPLER Unmodified 1056.5815 0.58152458 397 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 3 2 1 2 48.737 52.064 2 2.8085E-06 12363 Miao_Sh-H9_proteinG_mass3_141226_03 137.95 77.517 59963 0 0 0 0 1286.5 25430 0 0 0 13085 9986.8 10175 2677 397 2626 24946;24947;24948;24949;24950;24951;24952;24953;24954 27171;27172;27173;27174;27175 27175 5 TLFPLIEAK Unmodified 1030.6063 0.60628277 364 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 2 1 1 2 2 82.571 74.556 2 0.0096089 16330 Miao_Sh-H9_Flag_mass3_141226_01 79.148 35.34 20039 0 0 2835.4 1831.8 0 3721.3 1319.7 0 0 3502.3 4590.6 2237.8 2678 364 2627 24955;24956;24957;24958;24959;24960;24961;24962;24963;24964;24965 27176;27177;27178;27179;27180 27178 5 TLHPDLGTDK Unmodified 1095.556 0.55603811 309 P00338;P00338-3;P00338-2;P00338-5;P00338-4 LDHA L-lactate dehydrogenase A chain yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 2 1 35.895 36.663 2;3 0.011556 7698 Miao_Sh-H9_proteinG_mass3_141226_01 72.321 55.65 1570.7 0 0 0 0 0 0 0 108.6 0 797.3 0 664.76 2679 309 2628 24966;24967;24968;24969 27181;27182;27183 27182 3 TLIEAGLPQK Unmodified 1068.6179 0.61791009 281 O43390;O43390-2;O43390-3 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 53.76 54.412 2 0.022576 14121 Miao_Sh-H9_proteinG_mass3_141226_01 63.415 28.147 0 0 0 0 0 0 0 0 0 0 0 0 0 2680 281 2629 24970 27184 27184 1 TLIEFLLR Unmodified 1003.6066 0.60661712 421 P28838;P28838-2 LAP3 Cytosol aminopeptidase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 98.452 98.276 2 0.0052126 23251 Miao_Sh-H9_Flag_mass3_141226_03 101.72 36.469 4176.8 0 0 0 0 0 0 0 2071.3 2105.5 0 0 0 2681 421 2630 24971;24972 27185;27186 27186 2 TLLAILR Unmodified 798.53272 0.5327239 430 P33993;P33993-3 MCM7 DNA replication licensing factor MCM7 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 77.28 74.741 2 0.045832 13319 Miao_Sh-c_Flag_mass3_141226_03 73.039 10.325 1718.3 560.6 0 865.29 0 0 0 0 0 0 0 292.46 0 2682 430 2631 24973;24974;24975 27187 27187 1 TLLDIDNTR Unmodified 1059.556 0.55603811 432 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 2 2 1 57.399 58.371 2 1.2209E-30 15320 Miao_Sh-H9_proteinG_mass3_141226_01 188.87 110.36 319810 0 0 0 10046 6553.4 77189 913.15 0 0 97679 59023 68411 + 2683 432 2632 24976;24977;24978;24979;24980;24981;24982;24983;24984;24985 27188;27189;27190;27191;27192;27193;27194;27195;27196;27197;27198;27199;27200;27201;27202;27203;27204;27205;27206;27207;27208;27209 27197 22 TLLEGEESR Unmodified 1032.5088 0.50875357 314 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 2 1 1 1 1 1 1 1 1 39.014 40.449 2 1.745E-21 7688 Miao_Sh-c_proteinG_mass3_141226_03 176.33 145.02 106950 824.59 946.37 885.19 3670.5 3748.6 30850 951.58 1340.6 1395.3 0 32641 29698 + 2684 314 2633 24986;24987;24988;24989;24990;24991;24992;24993;24994;24995;24996;24997 27210;27211;27212;27213;27214;27215;27216;27217;27218;27219;27220;27221;27222;27223;27224;27225;27226;27227;27228;27229;27230 27219 21 TLLEGSGLESIISIIHSSLAEPR Unmodified 2421.3115 0.31150432 464 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 2 2 1 1 2 2 114.9 115.69 3 2.8116E-19 30069 Miao_Sh-H9_Flag_mass3_141226_02 92.01 62.408 48387 5777.7 7437 5740.4 8401.7 4705.3 0 0 8202.2 8122.3 0 0 0 2685 464 2634 24998;24999;25000;25001;25002;25003;25004;25005;25006;25007;25008;25009 27231;27232;27233;27234;27235;27236;27237;27238;27239;27240 27239 8 TLLVADPR Unmodified 883.51272 0.51271674 259 P62249;M0R210 RPS16 40S ribosomal protein S16 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 2 2 1 1 1 44.842 47.499 2 0.001132 11417 Miao_Sh-H9_proteinG_mass3_141226_02 119.86 39.698 39062 0 998.67 0 0 0 9923.8 0 612.21 0 11876 8874.1 6777.1 2686 259 2635 25010;25011;25012;25013;25014;25015;25016;25017 27241;27242;27243;27244;27245;27246;27247;27248;27249;27250;27251;27252;27253;27254 27250 14 TLQALEFHTVPFQLLAR Unmodified 1983.0942 0.094181742 549 Q08380 LGALS3BP Galectin-3-binding protein yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 94.506 95.86 3 0.00088286 22551 Miao_Sh-c_proteinG_mass3_141226_01 59.728 48.085 0 0 0 0 0 0 0 0 0 0 0 0 0 2687 549 2636 25018 27255 27255 1 TLQEVTQLSQEAQR Unmodified 1629.8322 0.83221298 446 P40939;P40939-2 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 56.937 59.794 3 0.028741 15225 Miao_Sh-H9_proteinG_mass3_141226_03 43.518 22.779 0 0 0 0 0 0 0 0 0 0 0 0 0 2688 446 2637 25019 27256 27256 1 TLQQNAESR Unmodified 1045.5152 0.51523593 306 O95816;B4DXE2 BAG2 BAG family molecular chaperone regulator 2 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 28.394 28.324 2 0.034453 2722 Miao_Sh-c_Flag_mass3_141226_02 63.694 26.136 835.56 0 219.82 97.094 0 0 0 145.52 342.96 30.177 0 0 0 2689 306 2638 25020;25021;25022;25023;25024 27257 27257 1 TLSDYNIQK Unmodified 1080.5451 0.54513908 45 P0CG47;P62979;P62987;J3QS39;J3QTR3;F5H6Q2;F5GYU3;F5H2Z3;F5H265;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q96C32;F5H041;P0CG48;M0R1V7;M0R1M6;M0R2S1 UBB;RPS27A;UBA52;UBC Polyubiquitin-B;Ubiquitin;Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-C;Ubiquitin yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 2 1 1 2 3 2 1 44.947 44.719 2;3 2.5843E-21 4647 Miao_Sh-c_Flag_mass3_141226_02 174.8 107.3 353650 61654 44510 59.554 0 0 0 69749 65024 99999 12651 0 0 2690 45 2639 25025;25026;25027;25028;25029;25030;25031;25032;25033;25034;25035;25036 27258;27259;27260;27261;27262;27263;27264;27265;27266;27267;27268;27269;27270;27271;27272 27263 15 TLSDYNIQKESTLHLVLR GlyGly (K) 2243.191 0.19099525 45 P0CG47;P62979;P62987;J3QS39;J3QTR3;F5H6Q2;F5GYU3;F5H2Z3;F5H265;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q96C32;F5H041;P0CG48;M0R1M6;M0R2S1 UBB;RPS27A;UBA52;UBC Polyubiquitin-B;Ubiquitin;Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-C;Ubiquitin yes no 0 1 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 2 2 2 1 3 70.424 70.669 2;3;4 1.0957E-29 13740 Miao_Sh-H9_Flag_mass3_141226_03 159.34 142.1 261040 43373 21051 15223 0 0 0 52254 53205 75938 0 0 0 2691 45 2640 25037;25038;25039;25040;25041;25042;25043;25044;25045;25046;25047;25048 27273;27274;27275;27276;27277;27278;27279;27280;27281;27282;27283;27284;27285;27286;27287;27288;27289;27290;27291 27288 3 19 TLSSPSNRPSGETSVPPPPAVGR Unmodified 2289.1713 0.17132244 619 Q8WWM7;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7-3 ATXN2L Ataxin-2-like protein yes no 0 0 0 0 1 By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching 1 1 1 47.425 49.697 3 1.0304E-07 6279 Miao_Sh-H9_Flag_mass3_141226_02 66.448 47.275 0 0 0 0 0 0 0 0 0 0 0 0 0 2692 619 2641 25049;25050;25051 27292;27293;27294 27294 3 TLSSSTQASIEIDSLYEGIDFYTSITR Unmodified 2996.4502 0.45024222 356 P11142;E9PKE3;P11142-2;E9PNE6;A8K7Q2;E9PN89 HSPA8 Heat shock cognate 71 kDa protein yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 3 3 1 1 4 1 2 1 114.34 114.71 3 7.7417E-61 27010 Miao_Sh-c_Flag_mass3_141226_02 153.82 140.15 48276 0 16669 0 7383.5 0 0 10054 0 14169 0 0 0 2693 356 2642 25052;25053;25054;25055;25056;25057;25058;25059;25060;25061;25062;25063;25064;25065;25066;25067 27295;27296;27297;27298;27299;27300;27301;27302;27303;27304;27305;27306;27307;27308;27309;27310;27311;27312;27313;27314;27315 27298 21 TLSSSTQASLEIDSLFEGIDFYTSITR Unmodified 2980.4553 0.4553276 343 P08107;P08107-2;E7EP94;V9GZ37 HSPA1A Heat shock 70 kDa protein 1A/1B yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 118.37 118.11 3 0.0060958 29619 Miao_Sh-H9_Flag_mass3_141226_01 34.78 23.134 3474.2 0 0 0 0 0 0 3474.2 0 0 0 0 0 2694 343 2643 25068 27316 27316 1 TLTAVHDAILEDLVFPSEIVGK Unmodified 2366.2733 0.2733279 496 P62081;B5MCP9 RPS7 40S ribosomal protein S7 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 3 3 2 4 3 4 1 1 2 1 4 107.89 105.11 3;4 4.1636E-22 24176 Miao_Sh-H9_Flag_mass3_141226_01 105.46 86.526 257180 14582 16796 0 30041 53019 40177 18125 0 21782 61789 871.82 0 2695 496 2644 25069;25070;25071;25072;25073;25074;25075;25076;25077;25078;25079;25080;25081;25082;25083;25084;25085;25086;25087;25088;25089;25090;25091;25092;25093;25094;25095;25096;25097;25098 27317;27318;27319;27320;27321;27322;27323;27324;27325;27326;27327;27328;27329;27330;27331;27332;27333;27334;27335;27336;27337;27338;27339;27340;27341;27342;27343;27344;27345;27346;27347;27348;27349;27350;27351;27352;27353;27354 27343 36 TLTGKTITLEVEPSDTIENVK GlyGly (K) 2401.2588 0.25880005 45;239 P0CG47;P62979;P62987;J3QS39;J3QTR3;F5H6Q2;F5GYU3;F5H2Z3;F5H265;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q96C32;F5H041;P0CG48;M0R1V7;F5GZ39;J3QLP7;J3QSA3;J3QRK5 UBB;RPS27A;UBA52;UBC;UBBP4 Polyubiquitin-B;Ubiquitin;Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-C;Ubiquitin no no 0 1 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 3 3 2 2 2 4 3 70.244 70.665 2;3;4 1.2397E-107 13381 Miao_Sh-H9_Flag_mass3_141226_02 201.96 162.06 328430 0 59428 5382.3 3572.3 0 0 79960 65797 114290 0 0 0 2696 45;239 2645 25099;25100;25101;25102;25103;25104;25105;25106;25107;25108;25109;25110;25111;25112;25113;25114;25115;25116;25117 27355;27356;27357;27358;27359;27360;27361;27362;27363;27364;27365;27366;27367;27368;27369;27370;27371;27372;27373 27370 4;5;12 19 TLTSIVHLER Unmodified 1167.6612 0.66117189 600 Q7Z6Z7;Q7Z6Z7-2;Q7Z6Z7-3;Q5H962 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 57.216 57.165 3 0.025735 8480 Miao_Sh-H9_Flag_mass3_141226_01 55.353 16.785 0 0 0 0 0 0 0 0 0 0 0 0 0 2697 600 2646 25118 27374 27374 1 TLTVEVSVETIR Unmodified 1345.7453 0.74529545 306 O95816;B4DXE2;A2A296 BAG2 BAG family molecular chaperone regulator 2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 70.192 69.741 2 0.0040919 13067 Miao_Sh-H9_Flag_mass3_141226_01 69.03 35.768 0 0 0 0 0 0 0 0 0 0 0 0 0 2698 306 2647 25119 27375 27375 1 TLTVEVSVETIRNPQQQESLK Unmodified 2398.2704 0.27036779 306 O95816;B4DXE2;A2A296 BAG2 BAG family molecular chaperone regulator 2 yes no 0 0 0 0 1 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 2 1 1 66.559 66.572 3 0.00067155 11007 Miao_Sh-c_Flag_mass3_141226_01 56.304 31.59 6354.2 2624.8 1981.1 0 0 0 0 1748.2 0 0 0 0 0 2699 306 2648 25120;25121;25122;25123;25124 27376;27377;27378;27379 27376 4 TLVDIAK Unmodified 758.4538 0.45380487 638 Q99832;Q99832-3;F8WAM2 CCT7 T-complex protein 1 subunit eta yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 44.211 46.158 2 0.038695 10570 Miao_Sh-H9_proteinG_mass3_141226_03 77.058 14.343 3683.7 0 0 0 91.183 356.91 0 142.2 0 0 1274.4 1022.2 796.77 2700 638 2649 25125;25126;25127;25128;25129;25130 27380 27380 1 TLVLLDNLNVR Unmodified 1268.7452 0.74523587 136 P39656;E7EWT1;U3KQ84 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 1 1 101.25 91.428 2 0.0076816 15755 Miao_Sh-c_Flag_mass3_141226_03 69.721 29.369 4058.1 0 0 0 0 0 0 0 1922.4 0 1208.9 0 926.7 2701 136 2650 25131;25132;25133;25134;25135 27381;27382;27383 27381 3 TLVLLMGK Unmodified 873.53576 0.53576037 339 P07737;K7EJ44;CON__P02584 PFN1 Profilin-1 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 1 69.194 69.341 2 0.014818 11752 Miao_Sh-c_Flag_mass3_141226_02 84.568 44.299 10948 1635.7 1413.5 1345.1 0 0 0 2327 3298.8 0 927.54 0 0 2702 339 2651 25136;25137;25138;25139;25140;25141;25142 27384;27385;27386;27387;27388;27389 27385 6 TLVLSNLSYSATEETLQEVFEK Unmodified 2500.2585 0.2584657 389 P19338;H7BY16 NCL Nucleolin yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 113.96 109.08 3 1.8762E-27 25022 Miao_Sh-c_Flag_mass3_141226_01 134.86 115.6 33926 4848.7 0 0 10197 0 0 0 0 0 11804 7076.8 0 2703 389 2652 25143;25144;25145;25146 27390;27391;27392;27393;27394;27395 27390 6 TLYGFGG Unmodified 713.33844 0.33844077 513 P62805 HIST1H4A Histone H4 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 63.654 66.21 2 0.011367 17751 Miao_Sh-H9_proteinG_mass3_141226_03 100.27 100.27 658.54 0 0 0 0 0 0 0 0 0 0 0 658.54 2704 513 2653 25147 27396 27396 1 TNAENEFVTIK Unmodified 1264.6299 0.62993134 314 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching 3 2 1 1 3 2 1 1 1 2 1 53.904 55.845 2;3 2.7518E-30 13387 Miao_Sh-c_proteinG_mass3_141226_03 172.51 132.57 169600 2398.5 2093.5 1684.7 755.89 8729.7 72811 4225.3 5438 0 4172 63736 3551.7 + 2705 314 2654 25148;25149;25150;25151;25152;25153;25154;25155;25156;25157;25158;25159;25160;25161;25162;25163;25164;25165 27397;27398;27399;27400;27401;27402;27403;27404;27405;27406;27407;27408;27409;27410;27411;27412;27413;27414 27402 18 TNAENEFVTIKK Unmodified 1392.7249 0.72489436 314 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 1 1 1 2 45.484 47.229 3 5.9616E-24 10810 Miao_Sh-H9_proteinG_mass3_141226_03 155.66 130.65 47137 216.25 445.31 240.7 578.65 645.73 6453.3 0 256.45 400.4 14829 9196.7 13874 + 2706 314 2655 25166;25167;25168;25169;25170;25171;25172;25173;25174;25175;25176;25177 27415;27416;27417;27418;27419;27420 27420 6 TNIIPVLEDAR Unmodified 1239.6823 0.68230126 4 A6NHQ2;R4GMW7 FBLL1 rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 69.332 70.084 2 0.0032141 20248 Miao_Sh-H9_proteinG_mass3_141226_01 78.548 49.84 0 0 0 0 0 0 0 0 0 0 0 0 0 2707 4 2656 25178;25179 27421;27422 27422 2 TNLDESDVQPVK Unmodified 1343.6569 0.65687437 680 Q9Y3I0;E7EQS9 RTCB tRNA-splicing ligase RtcB homolog yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 2 40.961 44.57 2 4.4091E-06 10608 Miao_Sh-H9_proteinG_mass3_141226_01 130.77 64.93 5456.2 0 0 0 0 0 2696.5 0 0 0 2759.8 0 0 2708 680 2657 25180;25181;25182;25183;25184 27423;27424;27425;27426;27427 27424 5 TNQELQEINR Unmodified 1243.6157 0.61567826 337 P07355;P07355-2;H0YMM1;H0YKS4;H0YMD0;H0YMU9;H0YN42;A6NMY6;H0YNP5;H0YM50;H0YLE2;H0YN52;H0YNA0;H0YN28;H0YL33 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 38.927 41.684 2 0.01457 8839 Miao_Sh-H9_proteinG_mass3_141226_03 71.03 55.401 954.93 0 0 0 0 0 0 0 0 0 0 0 954.93 2709 337 2658 25185 27428 27428 1 TNRPPLSLSR Unmodified 1139.6411 0.64110515 190 Q07020;G3V203;J3QQ67;H0YHA7;F8VWC5;F8VUA6;F8VYV2 RPL18 60S ribosomal protein L18 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 2 2 2 39.855 41.058 3 4.7602E-07 8433 Miao_Sh-c_proteinG_mass3_141226_03 139.76 109.02 12935 512.8 96.673 0 0 0 5556 0 156.44 0 6613.5 0 0 2710 190 2659 25186;25187;25188;25189;25190;25191;25192;25193;25194;25195 27429;27430;27431;27432;27433;27434;27435;27436 27430 8 TNSTFNQVVLK Unmodified 1249.6667 0.6666512 190 Q07020;G3V203;J3QQ67;H0YHA7;F8VWC5;F8VYV2 RPL18 60S ribosomal protein L18 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 55.898 57.159 2 3.9025E-15 14112 Miao_Sh-H9_proteinG_mass3_141226_02 156.14 101.06 38256 0 413.89 0 1162.9 0 0 0 0 1397.9 13965 12227 9088.9 2711 190 2660 25196;25197;25198;25199;25200;25201 27437;27438;27439;27440 27438 4 TNYNDRYDEIR Unmodified 1457.6535 0.65352033 509 P62424;Q5T8U2 RPL7A 60S ribosomal protein L7a yes no 0 0 0 0 1 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 2 1 1 1 2 1 1 2 2 52.973 52.331 3 0.0022056 4486 Miao_Sh-c_Flag_mass3_141226_01 96.342 77.717 23648 361.43 285 7024.3 0 767.27 3352.2 236.7 1501.3 632.23 2806.6 3280.4 3400.2 2712 509 2661 25202;25203;25204;25205;25206;25207;25208;25209;25210;25211;25212;25213;25214;25215;25216 27441;27442;27443;27444;27445;27446;27447 27441 7 TPAFAESVTEGDVR Unmodified 1477.7049 0.7048872 439 P36957;Q86SW4;H0YJF9;G3V5M3;G3V3F0 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 60.012 57.957 2 0.0040075 15232 Miao_Sh-H9_proteinG_mass3_141226_02 63.062 47.689 3579.3 273.31 0 0 0 0 1064.9 0 0 0 0 1841.6 399.46 2713 439 2662 25217;25218;25219;25220;25221 27448;27449 27449 2 TPAQFDADELR Unmodified 1261.5939 0.59388018 313 P04083;Q5T3N1 ANXA1 Annexin A1;Annexin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 50.642 52.333 2 0.01515 14050 Miao_Sh-H9_proteinG_mass3_141226_02 63.473 45.742 3003.3 284.67 0 174.76 0 0 0 0 0 0 0 2099.3 444.57 2714 313 2663 25222;25223;25224;25225 27450 27450 1 TPASPVVHIR Unmodified 1075.6138 0.61382777 371 P14866;M0QXS5;M0QYL7;M0R1W6 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 2 2 2 2 1 2 2 2 39.505 41.086 2;3 0.00075076 8899 Miao_Sh-H9_proteinG_mass3_141226_02 99.34 65.79 16851 279.57 367.83 291.83 0 0 3313.1 607 402.87 0 2981.1 4523.9 4083.4 2715 371 2664 25226;25227;25228;25229;25230;25231;25232;25233;25234;25235;25236;25237;25238;25239;25240;25241 27451;27452;27453;27454;27455;27456;27457;27458;27459;27460;27461;27462;27463;27464 27461 14 TPELNLDQFHDK Unmodified 1455.6994 0.69940789 29 P27824;B4DGP8;B4E2T8;H0Y9Q7;D6RGY2;D6RFL1;H0Y9H1 CANX Calnexin yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 1 55.453 57.341 3 0.035066 9590 Miao_Sh-c_proteinG_mass3_141226_02 41.242 31.237 1869.8 0 379.89 0 472.21 1017.7 0 0 0 0 0 0 0 2716 29 2665 25242;25243;25244 27465 27465 1 TPETLLPFAEAEAFLK Unmodified 1775.9346 0.93455278 588 Q3KQU3;Q3KQU3-2;Q3KQU3-4;Q3KQU3-3 MAP7D1 MAP7 domain-containing protein 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 108.62 110.27 3 0.0013331 28075 Miao_Sh-c_proteinG_mass3_141226_01 61.265 48.773 0 0 0 0 0 0 0 0 0 0 0 0 0 2717 588 2666 25245 27466 27466 1 TPFLLSGTSYK Unmodified 1212.639 0.63903946 484 P55084;P55084-2;B5MD38;C9JEY0;C9JE81;C9K0M0 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 2 69.696 69.095 2 0.0028706 18697 Miao_Sh-H9_proteinG_mass3_141226_03 93.839 55.536 4495.1 1205.2 0 0 0 0 1033.3 0 0 0 0 0 2256.5 2718 484 2667 25246;25247;25248;25249 27467;27468 27467 2 TPFLLVGTQIDLR Unmodified 1471.8399 0.83986454 133 P60953;E7ETU3;P60953-1;Q5JYX0 CDC42 Cell division control protein 42 homolog yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 102.8 96.242 2 1.0903E-05 20321 Miao_Sh-H9_Flag_mass3_141226_01 115.12 85.31 0 0 0 0 0 0 0 0 0 0 0 0 0 2719 133 2668 25250;25251;25252;25253;25254;25255 27469;27470;27471;27472;27473;27474 27470 6 TPGPGAQSALR Unmodified 1053.5567 0.55670682 501 P62263;H0YB22;E5RH77 RPS14 40S ribosomal protein S14 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 1 1 1 1 1 2 3 1 1 2 35.973 37.357 2 1.3412E-09 3764 Miao_Sh-c_Flag_mass3_141226_01 142.89 66.417 38349 889.22 124.15 740.34 564.52 617.62 8894.3 836.91 745.37 236.33 8933.4 7918.5 7848.6 2720 501 2669 25256;25257;25258;25259;25260;25261;25262;25263;25264;25265;25266;25267;25268;25269;25270;25271;25272 27475;27476;27477;27478;27479;27480;27481;27482;27483;27484;27485;27486;27487;27488;27489;27490;27491;27492;27493;27494;27495 27476 21 TPIGSFLGSLSLLPATK Unmodified 1700.9713 0.97127264 406 P24752;E9PRQ6;G3XAB4 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 109.19 108.53 2 0.025711 26171 Miao_Sh-H9_Flag_mass3_141226_01 40.432 24.491 0 0 0 0 0 0 0 0 0 0 0 0 0 2721 406 2670 25273 27496 27496 1 TPIVGQPSIPGGPVR Unmodified 1473.8304 0.83036248 103 CON__P12763 yes yes 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 3 59.86 61.048 2 5.6111E-32 10220 Miao_Sh-H9_Flag_mass3_141226_02 157.68 107.33 0 0 0 0 0 0 0 0 0 0 0 0 0 + 2722 103 2671 25274;25275;25276;25277;25278;25279;25280 27497;27498;27499;27500;27501;27502;27503 27502 7 TPSAAYLWVGTGASEAEK Unmodified 1836.8894 0.8893935 329 P06396;P06396-2;P06396-4;P06396-3;Q5T0H9;Q5T0H7;Q5T0H8 GSN Gelsolin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 2 73.477 74.062 2;3 0.0064153 20628 Miao_Sh-H9_proteinG_mass3_141226_03 44.662 37.297 3168.5 0 924.34 0 0 0 0 645.55 0 0 0 0 1598.6 + 2723 329 2672 25281;25282;25283;25284 27504;27505;27506 27504 3 TPSSDVLVFDYTK Unmodified 1470.7242 0.72422566 140 Q16576;Q09028;Q16576-2;H0YF10;E9PC52;Q09028-4;Q09028-3;Q09028-2;Q5JP01 RBBP7;RBBP4 Histone-binding protein RBBP7;Histone-binding protein RBBP4 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 1 2 2 71.634 73.428 2 3.7909E-06 21456 Miao_Sh-H9_proteinG_mass3_141226_01 119.96 78.087 0 0 0 0 0 0 0 0 0 0 0 0 0 2724 140 2673 25285;25286;25287;25288;25289 27507;27508;27509;27510;27511 27508 5 TPVEPEVAIHR Unmodified 1246.667 0.66698555 489 P60866;P60866-2;E5RIP1;E5RJX2 RPS20 40S ribosomal protein S20 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1 1 1 1 44.319 45.091 3 7.5203E-40 10767 Miao_Sh-H9_proteinG_mass3_141226_01 184.27 149.12 38945 829.79 1243.2 1035.7 72.682 0 0 1792.8 191.4 2222.1 10199 8914.5 12444 2725 489 2674 25290;25291;25292;25293;25294;25295;25296;25297;25298;25299;25300;25301 27512;27513;27514;27515;27516;27517;27518;27519;27520;27521 27519 10 TPVPSDIDISR Unmodified 1198.6194 0.61936665 358 P11586;F5H2F4 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 2 1 1 2 2 53.704 55.799 2 0.0029079 12821 Miao_Sh-c_proteinG_mass3_141226_03 83.182 35.995 14874 674.98 431.67 0 0 1705.1 1751.7 0 692.08 0 2703.1 4600.4 2314.9 2726 358 2675 25302;25303;25304;25305;25306;25307;25308;25309;25310;25311;25312 27522;27523;27524;27525 27523 4 TQEEGEER Unmodified 976.40977 0.40976781 651 Q9NR28;Q9NR28-2;Q9NR28-3;F5H796;F5GXT8 DIABLO Diablo homolog, mitochondrial yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 2 2 2 1 1 24.341 24.507 2 0.0044079 2371 Miao_Sh-H9_Flag_mass3_141226_02 106.88 61.545 2475.5 212.27 333.88 355.45 0 0 0 319.5 583.52 670.84 0 0 0 2727 651 2676 25313;25314;25315;25316;25317;25318;25319;25320;25321;25322 27526;27527;27528;27529;27530;27531 27530 6 TQEPPVDLSK Unmodified 1112.5714 0.57135383 370 P14649;F8W1I5 MYL6B Myosin light chain 6B yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 4 1 1 2 1 40.307 42.333 2 0.0054432 8676 Miao_Sh-c_proteinG_mass3_141226_03 82.831 56.767 9489.8 0 0 180.17 58.386 0 579.19 212.53 0 0 3590.8 2194.2 2674.6 2728 370 2677 25323;25324;25325;25326;25327;25328;25329;25330;25331;25332;25333 27532;27533;27534;27535;27536;27537;27538 27532 7 TQLEELEDELQATEDAK Unmodified 1960.9113 0.91131074 433;434 P35579;P35579-2;P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH9;MYH10 Myosin-9;Myosin-10 no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 4 3 3 2 8 3 2 6 2 6 2 93.771 89.629 2;3 1.1896E-235 32268 Miao_Sh-H9_proteinG_mass3_141226_02 276.62 230.34 463350 28502 20566 14221 62727 37838 6887.4 32714 36300 25845 74621 73304 49823 2729 433;434 2678 25334;25335;25336;25337;25338;25339;25340;25341;25342;25343;25344;25345;25346;25347;25348;25349;25350;25351;25352;25353;25354;25355;25356;25357;25358;25359;25360;25361;25362;25363;25364;25365;25366;25367;25368;25369;25370;25371;25372;25373;25374;25375 27539;27540;27541;27542;27543;27544;27545;27546;27547;27548;27549;27550;27551;27552;27553;27554;27555;27556;27557;27558;27559;27560;27561;27562;27563;27564;27565;27566;27567;27568;27569;27570;27571;27572;27573;27574;27575;27576;27577;27578;27579;27580;27581;27582;27583;27584;27585;27586;27587;27588;27589;27590;27591;27592;27593;27594;27595;27596;27597;27598;27599;27600;27601;27602;27603;27604;27605;27606;27607;27608;27609;27610;27611;27612;27613;27614;27615;27616;27617;27618;27619;27620;27621;27622;27623;27624;27625;27626;27627;27628;27629;27630;27631;27632;27633;27634;27635;27636;27637 27612 99 TQRPADVIFATVR Unmodified 1472.81 0.80996139 430 P33993;P33993-3 MCM7 DNA replication licensing factor MCM7 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 65.731 65.279 3 0.022323 11466 Miao_Sh-H9_Flag_mass3_141226_01 46.797 32.123 0 0 0 0 0 0 0 0 0 0 0 0 0 2730 430 2679 25376 27638 27638 1 TRLEQEIATYR Unmodified 1378.7205 0.72047768 97;102;109 P02533;CON__P02533;P19012;CON__P19012;CON__A2A4G1;CON__Q9Z2K1;CON__Q3ZAW8;CON__Q61782;A8MT21;B3KRA2;P35900;CON__P35900;CON__Q9D312;P08779;CON__P08779;Q04695;CON__Q04695;CON__Q9QWL7;F5GWP8 KRT14;KRT15;KRT20;KRT16;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 20;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 17 no no 0 0 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 2 2 1 1 4 1 2 1 4 3 4 61.687 60.925 2;3 8.8324E-16 7564 Miao_Sh-c_proteinG_mass3_141226_01 159.12 113 54247 1676.5 0 2305.4 4863.3 4355.9 14474 1517.6 1867.5 1517.6 13895 3598.1 4175.5 + 2731 97;102;109 2680 25377;25378;25379;25380;25381;25382;25383;25384;25385;25386;25387;25388;25389;25390;25391;25392;25393;25394;25395;25396;25397;25398;25399;25400;25401 27639;27640;27641;27642;27643;27644;27645;27646;27647;27648;27649;27650;27651;27652;27653;27654;27655;27656;27657;27658;27659;27660;27661;27662;27663;27664;27665;27666;27667;27668;27669 27641 30 TRLQQELDDLLVDLDHQR Unmodified 2206.1342 0.13420866 433 P35579 MYH9 Myosin-9 yes yes 0 0 0 0 1 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 107.26 101.38 3;4 3.6879E-18 39759 Miao_Sh-H9_proteinG_mass3_141226_01 138.97 98.788 27856 0 667.52 7358.7 3994 0 0 0 0 0 5835.4 622.77 9378.1 2732 433 2681 25402;25403;25404;25405;25406;25407 27670;27671;27672 27671 3 TSEDASEYFENYIEELK Unmodified 2065.9004 0.9004117 664 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 98.614 99.967 2 0.038628 24241 Miao_Sh-c_proteinG_mass3_141226_01 37.157 30.882 0 0 0 0 0 0 0 0 0 0 0 0 0 2733 664 2682 25408 27673 27673 1 TSEPKDAASLTGFMSKMELR 2 Oxidation (M);GlyGly (K) 2344.1039 0.10389608 235 Q2M243;J3QKX2 CCDC27 Coiled-coil domain-containing protein 27 yes no 0 1 2 0 2 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 78.841 78.979 3 0.0074637 14507 Miao_Sh-c_Flag_mass3_141226_01 43.208 17.843 90350 25378 0 23475 0 0 0 0 9486.6 32011 0 0 0 2734 235 2683 25409;25410;25411;25412 27674 27674 27;28 1 TSEVPYAGINIGPVHK Unmodified 1680.8835 0.88352026 289 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 2 1 1 1 67.039 64.194 3 0.0016077 18127 Miao_Sh-H9_proteinG_mass3_141226_01 57.788 48.593 3905.2 0 0 0 0 0 63.013 0 1024 0 1392 0 1426.2 2735 289 2684 25413;25414;25415;25416;25417;25418;25419 27675;27676;27677;27678 27677 4 TSFFQALGITTK Unmodified 1312.7027 0.70270235 326 P05388;F8VWS0;Q3B7A4;F8VU65;Q8NHW5;F8VPE8;G3V210;F8VW21 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 1 1 1 2 101.96 97.059 2 0.00015556 35629 Miao_Sh-H9_proteinG_mass3_141226_01 124.42 99.279 29438 0 1236.3 3532.6 0 0 5551 1203 0 5298.9 7210.6 5405.6 0 2736 326 2685 25420;25421;25422;25423;25424;25425;25426;25427;25428;25429;25430;25431 27679;27680;27681;27682;27683;27684;27685;27686;27687;27688;27689;27690;27691;27692;27693;27694 27689 16 TSGSVYITLK Unmodified 1067.5863 0.58627561 440 P37108;H0YLA2 SRP14 Signal recognition particle 14 kDa protein yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 3 1 2 3 2 62.467 61.254 2 0.0039728 13434 Miao_Sh-c_proteinG_mass3_141226_03 101.39 69.759 30107 0 779.06 0 0 0 788.31 0 967.47 0 11582 8771 7219 2737 440 2686 25432;25433;25434;25435;25436;25437;25438;25439;25440;25441;25442;25443 27695;27696;27697;27698;27699;27700;27701;27702;27703 27696 9 TSIAIDTIINQK Unmodified 1315.7347 0.73473076 410 P25705;P25705-2;P25705-3;K7EK77;K7ENJ4 ATP5A1 ATP synthase subunit alpha, mitochondrial yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 3 1 1 1 1 1 68.953 70.607 2 0.00030096 20249 Miao_Sh-H9_proteinG_mass3_141226_01 119.74 83.059 12171 0 6806 0 0 0 2334.2 0 0 0 3030.7 0 0 2738 410 2687 25444;25445;25446;25447;25448;25449;25450;25451 27704;27705;27706;27707;27708;27709;27710;27711 27708 8 TSIDAYDNFDNISLAQR Unmodified 1941.9068 0.90683448 535 Q00610;Q00610-2;J3KS13;K7EJJ5 CLTC Clathrin heavy chain 1 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 76.458 77.962 3 0.0034321 14352 Miao_Sh-c_Flag_mass3_141226_03 50.077 35.089 0 0 0 0 0 0 0 0 0 0 0 0 0 2739 535 2688 25452 27712 27712 1 TSIIATISPASLNLEETLSTLEYAHR Unmodified 2829.476 0.47600347 473 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 109.93 110.03 3 6.0877E-34 24640 Miao_Sh-c_Flag_mass3_141226_01 102.16 89.945 6502 0 0 0 0 0 0 0 6502 0 0 0 0 2740 473 2689 25453;25454;25455;25456 27713;27714;27715;27716;27717 27713 5 TSSIIIALTDGK Unmodified 1217.6867 0.68671794 486 P58335;P58335-4;P58335-3;P58335-2;J3KPY9 ANTXR2 Anthrax toxin receptor 2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 77.011 76.459 2 0.00094067 15314 Miao_Sh-H9_Flag_mass3_141226_01 85.536 40.672 0 0 0 0 0 0 0 0 0 0 0 0 0 2741 486 2690 25457 27718 27718 1 TTDGYLLR Unmodified 937.4869 0.48689592 492 P61247;F5H4F9;H0Y8L7;E9PFI5;D6RAT0;D6RED7;D6RAS7;D6RB09;D6RG13;H0Y9Y4;D6R9B6 RPS3A 40S ribosomal protein S3a yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching 1 2 1 47.576 51.552 2 0.0048832 10678 Miao_Sh-c_proteinG_mass3_141226_03 103.83 66.106 10254 0 0 0 0 0 7508.6 0 0 0 0 1277.2 1468.2 2742 492 2691 25458;25459;25460;25461 27719;27720;27721 27720 3 TTEYHDRDEQFYWIIEALGIR Unmodified 2654.2765 0.2765158 340 P07814;V9GYZ6 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 0 1 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 108.55 108.55 4 6.3359E-05 24575 Miao_Sh-c_Flag_mass3_141226_01 62.617 42.366 1371 1371 0 0 0 0 0 0 0 0 0 0 0 2743 340 2692 25462 27722 27722 1 TTGFGMIYDSLDYAK Unmodified 1680.7705 0.77052392 132 P62847;E7ETK0;P62847-2;P62847-3;P62847-4 RPS24 40S ribosomal protein S24 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 1 92.391 89.785 2 0.022041 20172 Miao_Sh-c_proteinG_mass3_141226_02 49.595 37.675 4230.4 0 0 0 0 2176.4 0 0 1332.2 0 721.78 0 0 2744 132 2693 25463;25464;25465 27723 27723 1 TTGIVMDSGDGVTHTVPIYEGYALPHAILR Unmodified 3182.607 0.60703441 524 P63261;P60709;I3L3I0;I3L1U9;I3L4N8 ACTG1;ACTB Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 87.894 87.793 4 0.031872 19254 Miao_Sh-H9_Flag_mass3_141226_02 19.733 16.975 3160 0 0 0 0 0 0 0 3160 0 0 0 0 2745 524 2694 25466 27724 27724 0 TTHFVEGGDAGNREDQINR Unmodified 2114.973 0.97295699 388 P18124;A8MUD9 RPL7 60S ribosomal protein L7 yes no 0 0 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 1 1 2 1 2 2 2 2 37.578 38.97 3;4 1.6947E-21 8312 Miao_Sh-H9_proteinG_mass3_141226_02 137.69 108.34 50186 709.33 560.24 591.78 1117.3 522.1 6870 1441.5 1537.9 1459.9 13700 12879 8797 2746 388 2695 25467;25468;25469;25470;25471;25472;25473;25474;25475;25476;25477;25478;25479;25480;25481;25482;25483;25484;25485 27725;27726;27727;27728;27729;27730;27731;27732;27733;27734;27735;27736;27737;27738;27739;27740;27741;27742;27743;27744;27745;27746 27743 22 TTIFSPEGR Unmodified 1006.5084 0.50835964 213 P25789;H0YMZ1;H0YL69;H0YMI6;H0YMA1;H0YLC2;H0YLS6 PSMA4 Proteasome subunit alpha type-4;Proteasome subunit alpha type yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 1 1 1 45.907 47.95 2 0.0065762 6942 Miao_Sh-H9_Flag_mass3_141226_02 82.287 32.751 11572 0 116.15 0 0 174.59 2267.9 0 2049.5 2706 1149.7 1186.6 1922 2747 213 2696 25486;25487;25488;25489;25490;25491;25492;25493;25494 27747;27748;27749 27748 3 TTISVAHLLAAR Unmodified 1251.7299 0.72992016 612 Q8NCA5;Q8NCA5-2;E9PH82;B4DT23 FAM98A Protein FAM98A yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 1 1 1 1 73.052 71.665 3 0.0012637 12568 Miao_Sh-H9_Flag_mass3_141226_01 80.245 65.565 9263 1172.6 0 0 1697.1 2932.4 0 1108 1654 0 698.96 0 0 2748 612 2697 25495;25496;25497;25498;25499;25500;25501;25502 27750;27751;27752;27753;27754;27755 27753 6 TTLQVDTLNAELAAER Unmodified 1743.9003 0.90029254 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 3 3 3 2 1 3 9 15 76.392 73.757 2;3 3.3464E-54 26780 Miao_Sh-H9_proteinG_mass3_141226_02 175.69 150.84 41794 0 4325.9 2628.3 11831 0 5408.1 678.77 0 0 9926.7 5381.9 1613.5 2749 434 2698 25503;25504;25505;25506;25507;25508;25509;25510;25511;25512;25513;25514;25515;25516;25517;25518;25519;25520;25521;25522;25523;25524;25525;25526;25527;25528;25529;25530;25531;25532;25533;25534;25535;25536;25537;25538;25539;25540;25541 27756;27757;27758;27759;27760;27761;27762;27763;27764;27765;27766;27767;27768;27769;27770;27771;27772;27773;27774;27775;27776;27777;27778;27779;27780;27781;27782;27783;27784;27785;27786;27787;27788;27789;27790;27791;27792;27793;27794 27775 39 TTLTAAITK Unmodified 918.5386 0.53859714 465 P49411;H3BNU3 TUFM Elongation factor Tu, mitochondrial yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 3 1 1 44.628 46.489 2 0.0023296 10672 Miao_Sh-H9_proteinG_mass3_141226_02 96.143 64.914 18282 534.71 0 257.56 0 0 3066.5 0 0 513.31 6321.2 4129.1 3460.1 2750 465 2699 25542;25543;25544;25545;25546;25547;25548;25549;25550 27795;27796;27797;27798;27799 27798 5 TTNFAGILSQGLR Unmodified 1376.7412 0.74121312 349 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching 2 1 2 1 1 1 90.693 88.444 2 0.010665 17868 Miao_Sh-c_proteinG_mass3_141226_02 59.709 39.009 12849 2319.9 0 0 0 2006.8 0 0 1939.8 1138.9 3291.7 2151.5 0 2751 349 2700 25551;25552;25553;25554;25555;25556;25557;25558 27800;27801 27800 2 TTPDVIFVFGFR Unmodified 1397.7343 0.73433683 132 P62847;E7ETK0;P62847-2;P62847-3;P62847-4 RPS24 40S ribosomal protein S24 yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 1 3 4 1 1 3 2 1 1 1 107.69 104.03 2 2.1454E-06 24785 Miao_Sh-H9_Flag_mass3_141226_02 133.42 96.736 99392 0 9826.6 629.53 0 1467.4 3795.4 9830.5 13295 13992 29877 16197 481.33 2752 132 2701 25559;25560;25561;25562;25563;25564;25565;25566;25567;25568;25569;25570;25571;25572;25573;25574;25575;25576;25577;25578 27802;27803;27804;27805;27806;27807;27808;27809;27810;27811;27812;27813;27814;27815;27816;27817;27818;27819 27813 18 TTPSVVAFTADGER Unmodified 1449.71 0.70997257 441 P38646;D6RJI2;D6RA73 HSPA9 Stress-70 protein, mitochondrial yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 2 2 1 3 1 2 4 3 58.76 60.347 2;3 3.0316E-125 16401 Miao_Sh-H9_proteinG_mass3_141226_01 232.35 202.81 1583000 347.07 4753.9 5199.8 82444 66743 188310 0 0 0 447830 419930 367410 2753 441 2702 25579;25580;25581;25582;25583;25584;25585;25586;25587;25588;25589;25590;25591;25592;25593;25594;25595;25596;25597;25598;25599;25600;25601;25602 27820;27821;27822;27823;27824;27825;27826;27827;27828;27829;27830;27831;27832;27833;27834;27835;27836;27837;27838;27839;27840;27841;27842;27843;27844;27845;27846;27847;27848;27849;27850;27851 27842 32 TTPSYVAFTDTER Unmodified 1486.694 0.69398816 356;343;382 P08107;P08107-2;P11142;E9PKE3;P11142-2;E9PNE6;P54652;E9PLF4;E9PI65;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25;P17066;P48741 HSPA1A;HSPA8;HSPA2;HSPA6;HSPA7 Heat shock 70 kDa protein 1A/1B;Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 3 2 4 1 4 3 2 3 2 58.639 59.907 2;3 2.4972E-44 16374 Miao_Sh-H9_proteinG_mass3_141226_01 180.61 148.36 298470 11372 14265 14015 20032 2933 44741 0 11511 867.99 78721 62436 37575 2754 343;356;382 2703 25603;25604;25605;25606;25607;25608;25609;25610;25611;25612;25613;25614;25615;25616;25617;25618;25619;25620;25621;25622;25623;25624;25625;25626;25627;25628;25629;25630;25631;25632;25633 27852;27853;27854;27855;27856;27857;27858;27859;27860;27861;27862;27863;27864;27865;27866;27867;27868;27869;27870;27871;27872;27873;27874;27875;27876;27877;27878;27879 27874 27 TTQVPQFILDDFIQNDR Unmodified 2049.0167 0.016719282 548 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 2 99.503 100.13 3 2.0439E-06 24755 Miao_Sh-c_proteinG_mass3_141226_01 101.78 83.687 4808.6 0 0 0 2643.2 0 0 0 2165.4 0 0 0 0 2755 548 2704 25634;25635;25636;25637 27880;27881;27882 27880 3 TTYDSSLSSYTVPLEK Unmodified 1789.8622 0.8621757 619 Q8WWM7;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7-3;H3BUF6;H3BSK9;Q8WWM7-7 ATXN2L Ataxin-2-like protein yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 70.675 69.972 2 0.0056336 13348 Miao_Sh-H9_Flag_mass3_141226_02 53.362 45.237 0 0 0 0 0 0 0 0 0 0 0 0 0 2756 619 2705 25638 27883 27883 1 TTYLVLDEADR Unmodified 1294.6405 0.64049603 34 P17844;J3KTA4;B4DLW8;J3QSF1;J3KRZ1 DDX5 Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 62.29 62.991 2 0.019819 10731 Miao_Sh-c_proteinG_mass3_141226_02 59.198 44.519 4523.6 641.65 0 0 235.02 0 0 0 1957.8 0 0 0 1689.2 2757 34 2706 25639;25640;25641;25642;25643 27884;27885 27884 2 TVAGGAWTYNTTSAVTVK Unmodified 1825.921 0.92102798 75 P61513;C9J4Z3 RPL37A 60S ribosomal protein L37a yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 1 2 2 69.356 64.382 2 1.9608E-16 11526 Miao_Sh-H9_Flag_mass3_141226_02 84.551 34.819 8534.1 0 0 0 0 0 0 0 3005.3 0 1409.9 4118.9 0 2758 75 2707 25644;25645;25646;25647;25648;25649 27886;27887;27888;27889;27890 27887 3 TVALWDLR Unmodified 972.53927 0.53926584 140 Q16576;Q09028;Q16576-2;H0YF10;E9PC52;Q09028-4;Q09028-3;Q09028-2;H0YEU5;B4DRT0;Q5JP02;H0YCT5;H0YDK2 RBBP7;RBBP4 Histone-binding protein RBBP7;Histone-binding protein RBBP4 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 75.948 76.579 2 0.034141 15564 Miao_Sh-c_proteinG_mass3_141226_02 72.23 21.171 7520.9 978.78 1725 0 0 1354.3 0 1480.4 1982.4 0 0 0 0 2759 140 2708 25650;25651;25652;25653;25654 27891 27891 1 TVDNFVALATGEK Unmodified 1363.6983 0.69834526 400 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 74.866 62.686 2 0.0032325 22128 Miao_Sh-H9_proteinG_mass3_141226_01 68.044 42.571 0 0 0 0 0 0 0 0 0 0 0 0 0 2760 400 2709 25655 27892 27892 1 TVGATALPR Unmodified 884.50797 0.50796571 469 P50990;P50990-2;P50990-3;H7C4C8 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 38.983 40.837 2 0.021494 7895 Miao_Sh-c_proteinG_mass3_141226_03 69.915 34.47 2305.3 0 362.79 0 0 165.51 1257 147.62 0 372.4 0 0 0 2761 469 2710 25656;25657;25658;25659;25660;25661 27893;27894;27895 27894 3 TVGQLYK Unmodified 807.44905 0.44905385 433;434;158 P35579;P35579-2;P35580;P35580-3;P35580-2;F8W6L6;P35580-4;Q7Z406;F2Z2U8;G8JLL9;Q7Z406-6;Q7Z406-2;Q7Z406-5;Q7Z406-4;M0QY43 MYH9;MYH10;MYH14 Myosin-9;Myosin-10;Myosin-14 no no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 1 1 1 37.057 38.032 2 0.0071383 8188 Miao_Sh-H9_proteinG_mass3_141226_01 111.04 52.431 22027 1185.3 896.35 845.23 1184.2 1161.9 0 1056.1 0 1200.4 9343 0 5154.3 2762 433;434;158 2711 25662;25663;25664;25665;25666;25667;25668;25669;25670 27896;27897;27898;27899;27900 27900 5 TVGVEPAADGK Unmodified 1042.5295 0.52948901 210 P46779;H0YKD8;P46779-2;P46779-3;H0YMF4;P46779-4;P46779-5;H0YLP6 RPL28 60S ribosomal protein L28 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 2 1 3 1 1 1 3 1 1 2 2 31.874 32.726 2 0.0006208 3080 Miao_Sh-c_Flag_mass3_141226_02 119.39 91.212 21032 1655.4 1161 1624.6 36.988 1374.7 4109.5 1808.3 1489.7 1488.7 0 3127.8 3155.3 2763 210 2712 25671;25672;25673;25674;25675;25676;25677;25678;25679;25680;25681;25682;25683;25684;25685;25686;25687;25688 27901;27902;27903;27904;27905;27906;27907;27908;27909;27910;27911;27912;27913;27914 27902 14 TVIIEQSWGSPK Unmodified 1343.7085 0.70851601 354 P10809;E7ESH4;E7EXB4;B7Z712;C9JL25;C9JL19;C9JCQ4 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 2 1 4 2 1 1 60.999 61.575 2 8.0978E-12 16021 Miao_Sh-H9_proteinG_mass3_141226_02 142.51 93.723 5181.7 0 0 1457.2 0 0 0 3724.5 0 0 0 0 0 2764 354 2713 25689;25690;25691;25692;25693;25694;25695;25696;25697;25698;25699;25700;25701 27915;27916;27917;27918;27919;27920;27921;27922;27923;27924;27925;27926;27927;27928;27929 27929 15 TVLDLAVVLFETATLR Unmodified 1760.0084 0.0083864269 369 P14625;H0YIV0 HSP90B1 Endoplasmin yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 2 4 2 122.19 122.5 2;3 1.0475E-10 31250 Miao_Sh-H9_Flag_mass3_141226_01 119 106.51 31424 7784.9 4769.9 9654.7 6972.7 0 0 2241.8 0 0 0 0 0 2765 369 2714 25702;25703;25704;25705;25706;25707;25708;25709;25710;25711 27930;27931;27932;27933;27934;27935;27936;27937;27938;27939 27939 10 TVLEHYALEDDPLAAFK Unmodified 1930.9676 0.96764382 255 Q3ZCQ8;M0R0C3;M0R2F8;Q3ZCQ8-3;Q3ZCQ8-2 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 87.912 87.16 3 3.4041E-15 19724 Miao_Sh-H9_Flag_mass3_141226_02 118.2 99.379 2168.8 0 0 0 0 0 0 2168.8 0 0 0 0 0 2766 255 2715 25712;25713;25714 27940;27941;27942 27942 3 TVLQELINVLK Unmodified 1268.7704 0.77038799 473 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 2 1 1 111.97 112.14 2 0.0010571 25783 Miao_Sh-c_Flag_mass3_141226_01 101.35 52.748 51699 5139.6 6702.3 7454.8 0 0 0 8434.8 12303 11665 0 0 0 2767 473 2716 25715;25716;25717;25718;25719;25720;25721 27943;27944;27945;27946;27947;27948;27949;27950;27951;27952 27944 10 TVNDIVSALLNAEDEK Unmodified 1729.8734 0.87340909 150 Q13490;E9PMH5;Q13490-2;E9PIW1 BIRC2 Baculoviral IAP repeat-containing protein 2 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 102.41 102.11 2;3 1.3522E-08 22064 Miao_Sh-c_Flag_mass3_141226_02 93.381 77.158 4905.9 0 0 0 0 0 0 0 4905.9 0 0 0 0 2768 150 2717 25722;25723 27953;27954 27953 2 TVNELQNLTAAEVVVPR Unmodified 1852.0054 0.005426314 659 Q9NZI8;Q9NZI8-2 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 4 2 1 86.817 81.876 2;3 2.0473E-06 28523 Miao_Sh-H9_proteinG_mass3_141226_01 85.176 72.384 13359 1910.5 0 0 0 1293.8 2721.4 603.8 0 1722 5107.7 0 0 2769 659 2718 25724;25725;25726;25727;25728;25729;25730;25731;25732;25733;25734;25735;25736 27955;27956;27957;27958;27959;27960;27961;27962;27963;27964;27965 27960 11 TVNVVQFEPSK Unmodified 1246.6558 0.65575216 447 P41250 GARS Glycine--tRNA ligase yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 2 57.578 57.829 2 0.013235 9114 Miao_Sh-H9_Flag_mass3_141226_03 64.121 45.896 0 0 0 0 0 0 0 0 0 0 0 0 0 2770 447 2719 25737;25738 27966;27967 27967 2 TVPEELVKPEELSK Unmodified 1596.8611 0.86105349 162 Q9UMS4;H0YGF3;F5GY56 PRPF19 Pre-mRNA-processing factor 19 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 55.64 58.497 3 0.0016072 14759 Miao_Sh-H9_proteinG_mass3_141226_03 67.234 47.392 0 0 0 0 0 0 0 0 0 0 0 0 0 2771 162 2720 25739 27968 27968 1 TVSLGAGAK Unmodified 802.45487 0.45486751 334 P06748;P06748-2;P06748-3;E5RGW4 NPM1 Nucleophosmin yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 3 1 1 2 3 1 2 2 1 1 30.766 32.445 2 0.0020482 2992 Miao_Sh-c_Flag_mass3_141226_03 104.2 43.839 26544 1414.8 1805 1350.6 900.42 1506.3 5109.5 1856.8 2185.8 0 4633.5 3001 2780.6 2772 334 2721 25740;25741;25742;25743;25744;25745;25746;25747;25748;25749;25750;25751;25752;25753;25754;25755;25756;25757 27969;27970;27971;27972;27973;27974;27975;27976;27977;27978;27979;27980;27981;27982;27983;27984 27973 16 TVSPDRLELEAAQK Unmodified 1555.8206 0.82058566 574 Q14974;J3QR48 KPNB1 Importin subunit beta-1 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 50.882 52.035 3 0.0012843 12628 Miao_Sh-H9_proteinG_mass3_141226_01 66.004 15.917 2100.9 0 0 0 122.73 0 0 0 0 0 1978.2 0 0 2773 574 2722 25758;25759 27985 27985 0 TVSQIISLQTLK Unmodified 1329.7868 0.78676633 300 O76021;J3QSV6;I3L3C4;I3L3U9;I3L234 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 72.397 65.179 2 0.00032694 22271 Miao_Sh-H9_proteinG_mass3_141226_01 119.21 50.857 5146.4 0 0 0 0 0 0 686.1 0 0 4364.1 96.201 0 2774 300 2723 25760;25761;25762;25763 27986;27987;27988 27988 3 TVTAMDVVYALK Unmodified 1309.6952 0.69517413 513 P62805 HIST1H4A Histone H4 yes yes 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 1 1 1 2 1 2 1 1 2 93.342 91.693 2 0.00044824 18743 Miao_Sh-c_proteinG_mass3_141226_01 116.74 83.546 21858 0 1359.9 496.49 3913 2875.3 0 2467.7 856.69 1872.3 3862.5 4154.5 0 2775 513 2724 25764;25765;25766;25767;25768;25769;25770;25771;25772;25773;25774;25775;25776;25777 27989;27990;27991;27992;27993;27994;27995;27996;27997;27998;27999;28000 27990 12 TVTIVVR Unmodified 786.49634 0.49633839 65 P50991;B7Z9L0;P50991-2;B7Z2F4 CCT4 T-complex protein 1 subunit delta yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 45.018 45.018 2 0.025848 10762 Miao_Sh-H9_proteinG_mass3_141226_01 76.134 7.8222 365.03 365.03 0 0 0 0 0 0 0 0 0 0 0 2776 65 2725 25778;25779 28001;28002 28002 2 TVTNAVVTVPAYFNDSQR Unmodified 1980.9905 0.99050453 356 P11142;P11142-2;E9PN89;E9PLF4;E9PI65;E9PQQ4;E9PQK7;E9PK54 HSPA8 Heat shock cognate 71 kDa protein yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 3 2 2 1 5 7 4 12 6 7 4 78.293 74.875 2;3 5.3079E-24 15045 Miao_Sh-H9_Flag_mass3_141226_03 139.74 121.35 225120 13382 18749 14820 20542 12011 1519.4 21402 30751 26756 21258 24844 19085 2777 356 2726 25780;25781;25782;25783;25784;25785;25786;25787;25788;25789;25790;25791;25792;25793;25794;25795;25796;25797;25798;25799;25800;25801;25802;25803;25804;25805;25806;25807;25808;25809;25810;25811;25812;25813;25814;25815;25816;25817;25818;25819;25820;25821;25822;25823;25824;25825;25826;25827;25828;25829;25830;25831;25832;25833;25834 28003;28004;28005;28006;28007;28008;28009;28010;28011;28012;28013;28014;28015;28016;28017;28018;28019;28020;28021;28022;28023;28024;28025;28026;28027;28028;28029;28030;28031;28032;28033;28034;28035;28036;28037;28038;28039;28040;28041;28042;28043;28044;28045;28046;28047;28048;28049;28050;28051;28052;28053;28054;28055;28056;28057;28058;28059;28060;28061;28062;28063;28064;28065;28066;28067;28068;28069;28070;28071;28072;28073;28074;28075;28076;28077;28078;28079;28080;28081;28082;28083;28084;28085;28086;28087;28088;28089;28090;28091;28092;28093;28094;28095;28096;28097;28098;28099;28100;28101;28102;28103;28104;28105;28106;28107;28108;28109;28110;28111;28112;28113;28114;28115;28116;28117;28118;28119;28120;28121;28122;28123;28124 28091 122 TWNDPSVQQDIK Unmodified 1429.6838 0.68375782 355 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 3 3 3 5 2 8 3 2 2 52.739 54.301 2;3 2.4997E-83 14256 Miao_Sh-H9_proteinG_mass3_141226_01 209.25 179.7 178910 9888 8072.6 0 831.1 3116.9 20279 31611 26005 20332 18484 17612 22678 2778 355 2727 25835;25836;25837;25838;25839;25840;25841;25842;25843;25844;25845;25846;25847;25848;25849;25850;25851;25852;25853;25854;25855;25856;25857;25858;25859;25860;25861;25862;25863;25864;25865;25866;25867;25868 28125;28126;28127;28128;28129;28130;28131;28132;28133;28134;28135;28136;28137;28138;28139;28140;28141;28142;28143;28144;28145;28146;28147;28148;28149;28150;28151 28147 27 TYQELLVNQNPIAQPLASR Unmodified 2154.1433 0.14331678 119 Q9NX24;D6RC52;D6RCB9;J3QSY4 NHP2 H/ACA ribonucleoprotein complex subunit 2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 89.141 76.259 3 7.7683E-06 26340 Miao_Sh-H9_proteinG_mass3_141226_01 68.639 59.507 4282.5 0 0 0 0 0 2027.7 0 0 0 2254.8 0 0 2779 119 2728 25869;25870;25871 28152;28153;28154;28155;28156 28154 5 TYSLGSALRPSTSR Unmodified 1494.7791 0.77905519 346 P08670;B0YJC4 VIM Vimentin yes no 0 0 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 3 1 2 1 1 1 3 1 2 56.262 56.226 3 1.9851E-06 7550 Miao_Sh-H9_Flag_mass3_141226_02 122.66 96.681 76199 2340.6 2731.3 2601 4472.4 3573 10252 605.76 5629.7 8140.8 16810 8626.4 10416 2780 346 2729 25872;25873;25874;25875;25876;25877;25878;25879;25880;25881;25882;25883;25884;25885;25886;25887;25888;25889 28157;28158;28159;28160;28161;28162;28163;28164;28165;28166;28167;28168;28169;28170;28171;28172;28173;28174;28175 28164 19 TYSYLTPDLWK Unmodified 1385.6867 0.68671794 375 P15880;H0YEN5;E9PQD7 RPS2 40S ribosomal protein S2 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 2 1 1 2 1 1 85.352 84.449 2 4.4107E-06 17970 Miao_Sh-c_proteinG_mass3_141226_02 133.05 89.557 28289 0 0 365.6 10352 6010.6 0 1328.3 6073.2 0 4158.5 0 0 2781 375 2730 25890;25891;25892;25893;25894;25895;25896;25897;25898 28176;28177;28178;28179;28180;28181;28182;28183 28180 8 TYTGLSGLALLGTIISAYR Unmodified 1969.0884 0.088427662 666 Q9UKV5 AMFR E3 ubiquitin-protein ligase AMFR yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 117.9 118.05 2;3 1.3519E-05 31164 Miao_Sh-H9_Flag_mass3_141226_03 70.02 59.88 2758.4 0 0 0 0 0 0 222.25 0 2536.1 0 0 0 2782 666 2731 25899;25900;25901 28184;28185 28185 2 VAAAVDLIIK Unmodified 1011.6328 0.63283187 464 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 86.809 74.629 2 0.045519 26222 Miao_Sh-H9_proteinG_mass3_141226_01 51.436 28.365 0 0 0 0 0 0 0 0 0 0 0 0 0 2783 464 2732 25902 28186 28186 1 VAALFPALRPGGFQAHYR Unmodified 1970.0639 0.063884666 563 Q13501;E7EMC7;D6RBF1;C9J6J8;E3W990 SQSTM1 Sequestosome-1 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 75.753 73.58 4 0.016096 14568 Miao_Sh-H9_Flag_mass3_141226_03 51.235 29.375 16773 2442.3 2308.9 0 0 0 0 3553.4 4039.9 3879.3 549.5 0 0 2784 563 2733 25903;25904;25905;25906;25907;25908 28187 28187 1 VAALQNLVK Unmodified 954.58622 0.58621603 574 Q14974;Q14974-2;F5H4R7;J3KTM9 KPNB1 Importin subunit beta-1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 56.334 56.865 2 0.0038896 15372 Miao_Sh-H9_proteinG_mass3_141226_01 88.921 28.133 4468.9 450.96 0 0 0 0 0 745.95 938.09 0 1854.7 0 479.22 2785 574 2734 25909;25910;25911;25912;25913 28188 28188 1 VAASVLNPYVK Unmodified 1159.6601 0.66010926 462 P48047;H7C0C1 ATP5O ATP synthase subunit O, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 56.406 59.43 2 8.2174E-07 15075 Miao_Sh-H9_proteinG_mass3_141226_03 129.82 83.089 0 0 0 0 0 0 0 0 0 0 0 0 0 2786 462 2735 25914;25915;25916 28189;28190;28191 28191 3 VADIGLAAWGR Unmodified 1127.6087 0.60874239 403 P23526 AHCY Adenosylhomocysteinase yes yes 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 2 1 1 1 3 70.243 72.448 2 0.0015149 13662 Miao_Sh-H9_Flag_mass3_141226_01 111.86 88.483 13026 0 0 0 315.96 2788.2 1778.1 0 2040.7 3573.4 0 2529.4 0 2787 403 2736 25917;25918;25919;25920;25921;25922;25923;25924;25925;25926;25927 28192;28193;28194;28195;28196;28197;28198;28199;28200;28201 28194 10 VADNLAIQLAAVTEDK Unmodified 1669.8887 0.88866522 553 Q12906;Q12906-4;Q12906-5;Q12906-2;Q12906-6;Q12906-3;Q12906-7;K7EKJ9;K7EQR9;K7EKY0;K7ER69 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 5 2 1 2 2 98.486 89.358 2;3 2.8793E-05 31897 Miao_Sh-H9_proteinG_mass3_141226_01 93.768 61.733 17190 352.52 0 0 2445.1 0 3957.7 2432.5 0 0 2794.3 2352.9 2855.2 2788 553 2737 25928;25929;25930;25931;25932;25933;25934;25935;25936;25937;25938;25939;25940;25941 28202;28203;28204;28205;28206;28207;28208;28209;28210;28211;28212;28213 28211 12 VAEEHAPSIVFIDEIDAIGTK Unmodified 2253.1529 0.15287841 39 P62191;B4DR63 PSMC1 26S protease regulatory subunit 4 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 1 1 2 1 2 1 1 96.189 93.389 3 4.8953E-21 21554 Miao_Sh-H9_Flag_mass3_141226_03 103.4 85.386 16894 2435.5 0 386.51 2116.5 0 0 5859.2 3788.7 0 524.91 1782.8 0 2789 39 2738 25942;25943;25944;25945;25946;25947;25948;25949;25950;25951;25952 28214;28215;28216;28217;28218 28217 4 VAELYSIHNSGDK Unmodified 1431.6994 0.69940789 184 Q69YQ0;F8WAN1;Q69YQ0-2;C9J8U1 SPECC1L;SPECC1L-ADORA2A Cytospin-A yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 41.315 42.305 3 0.018669 10378 Miao_Sh-H9_proteinG_mass3_141226_01 47.242 30.58 3571.7 0 0 85.476 0 0 0 80.728 0 0 2833.7 0 571.79 2790 184 2739 25953;25954;25955;25956 28219 28219 1 VAETAVQLFISGDK Unmodified 1476.7824 0.78240924 510 P62495;B7Z7P8;Q96CG1;I3L492 ETF1 Eukaryotic peptide chain release factor subunit 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 1 1 3 1 4 1 1 3 1 3 93.767 87.394 2;3 1.8717E-34 17596 Miao_Sh-c_proteinG_mass3_141226_01 175.66 138.48 40090 1269.1 0 493.53 11384 1365.7 11299 976.24 776.13 0 3710.3 338.03 8477.3 2791 510 2740 25957;25958;25959;25960;25961;25962;25963;25964;25965;25966;25967;25968;25969;25970;25971;25972;25973;25974;25975 28220;28221;28222;28223;28224;28225;28226;28227;28228;28229;28230;28231;28232;28233;28234;28235 28226 16 VAFSVAR Unmodified 748.42317 0.42317345 443 P39023;G5E9G0;H7C422;B5MCW2 RPL3 60S ribosomal protein L3 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 2 1 1 2 1 1 1 1 1 42.078 44.457 2 6.0639E-17 10822 Miao_Sh-H9_proteinG_mass3_141226_01 170.72 48.179 17573 0 0 220.79 353.93 282.94 4210.3 329.59 0 744.66 4499.1 3805 3126.3 2792 443 2741 25976;25977;25978;25979;25980;25981;25982;25983;25984;25985;25986 28236;28237;28238;28239;28240;28241;28242 28240 6 VAGQDGSVVQFK Unmodified 1233.6354 0.63535107 7 P61956;P55854;Q6EEV6;H7BZT4;A8MUA9;A8MU27;P61956-2;P55854-2 SUMO2;SUMO3;SUMO4 Small ubiquitin-related modifier 2;Small ubiquitin-related modifier 3;Small ubiquitin-related modifier 4 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 1 2 49.186 50.217 2 0.00092418 11045 Miao_Sh-H9_proteinG_mass3_141226_03 98.407 57.008 7706.1 337.34 350.09 0 0 0 0 787.39 0 570.55 1917.6 0 3743.1 2793 7 2742 25987;25988;25989;25990;25991;25992;25993;25994;25995 28243;28244;28245;28246;28247 28247 5 VAGVVAPTLPR Unmodified 1078.6499 0.64987892 454 P46063 RECQL ATP-dependent DNA helicase Q1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 54.077 55.205 2 0.0070206 15481 Miao_Sh-H9_proteinG_mass3_141226_01 77.744 61.073 2476.7 707.64 0 0 47.877 0 0 0 0 0 1340.6 380.68 0 2794 454 2743 25996;25997;25998;25999 28248 28248 1 VAHALAEGLGVIACIGEK Unmodified 1806.9662 0.96620404 487 P60174;P60174-4;P60174-1;U3KQF3;U3KPZ0 TPI1 Triosephosphate isomerase yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 89.534 83.469 3 2.6192E-05 17927 Miao_Sh-c_proteinG_mass3_141226_01 68.576 39.85 2809 0 0 0 1402.7 0 1406.3 0 0 0 0 0 0 2795 487 2744 26000;26001 28249 28249 1 VALLDVFR Unmodified 931.5491 0.54910224 408 P25205;B4DWW4;J3KQ69 MCM3 DNA replication licensing factor MCM3 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 83.061 83.703 2 0.032223 16596 Miao_Sh-c_Flag_mass3_141226_01 73.26 16.75 3397.5 785.51 740.3 385.41 977.65 0 0 0 508.61 0 0 0 0 2796 408 2745 26002;26003;26004;26005;26006 28250 28250 1 VALTGLTVAEYFR Unmodified 1438.782 0.78201531 331 P06576;H0YH81;F8VPV9;F8W0P7 ATP5B ATP synthase subunit beta, mitochondrial;ATP synthase subunit beta yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 1 88.554 93.016 2 6.7225E-05 18927 Miao_Sh-c_Flag_mass3_141226_02 91.62 67.366 2012.4 0 0 0 0 2012.4 0 0 0 0 0 0 0 2797 331 2746 26007;26008;26009 28251;28252;28253 28252 3 VANVELYYR Unmodified 1125.5819 0.58185893 535 Q00610;Q00610-2;J3KS13 CLTC Clathrin heavy chain 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 1 2 1 1 1 55.476 57.405 2 0.001556 15377 Miao_Sh-H9_proteinG_mass3_141226_01 99.013 36.296 6727.6 0 1354.7 0 0 0 1680 0 2493.5 0 0 1199.5 0 2798 535 2747 26010;26011;26012;26013;26014;26015;26016 28254;28255;28256;28257;28258 28258 5 VANVSLLALYK Unmodified 1189.7071 0.70705945 502 P62266 RPS23 40S ribosomal protein S23 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 3 1 1 1 3 2 2 1 3 9 4 79.594 75.23 2 4.0552E-15 21501 Miao_Sh-c_proteinG_mass3_141226_03 155.99 125.19 171220 22906 383.03 8609.2 22958 26099 17349 0 12662 12913 26240 1756.9 19343 2799 502 2748 26017;26018;26019;26020;26021;26022;26023;26024;26025;26026;26027;26028;26029;26030;26031;26032;26033;26034;26035;26036;26037;26038;26039;26040;26041;26042;26043;26044;26045;26046;26047;26048 28259;28260;28261;28262;28263;28264;28265;28266;28267;28268;28269;28270;28271;28272;28273;28274;28275;28276;28277;28278;28279;28280;28281;28282;28283;28284;28285;28286;28287;28288;28289;28290;28291;28292;28293;28294;28295;28296;28297;28298 28269 40 VANYCSTHLLEHITTNEDFR Unmodified 2419.1227 0.12265769 297;296 O75688-2;C9JIR6;O75688-4;B8ZZF0;O75688-5;O75688 PPM1B Protein phosphatase 1B no no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 69.453 69.787 4 0.0017491 11293 Miao_Sh-c_Flag_mass3_141226_03 49.768 40.748 7434.4 0 0 2085.7 0 0 0 3389.7 0 1959 0 0 0 2800 297;296 2749 26049;26050;26051 28299;28300 28299 2 VAPAPAVVK Unmodified 850.52764 0.52763852 509 P62424;Q5T8U3 RPL7A 60S ribosomal protein L7a yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1 1 1 1 34.473 35.76 2 0.0018995 6957 Miao_Sh-H9_proteinG_mass3_141226_03 102 58.194 50483 1547.6 1520.5 1513.4 1121.4 1268.8 9146.4 1316.8 1813.4 1581.6 10629 10185 8838.7 2801 509 2750 26052;26053;26054;26055;26056;26057;26058;26059;26060;26061;26062;26063 28301;28302;28303;28304;28305;28306;28307;28308;28309;28310;28311;28312;28313;28314 28314 14 VAPDEHPILLTEAPLNPK Unmodified 1953.0571 0.057127534 589 Q562R1 ACTBL2 Beta-actin-like protein 2 yes yes 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS 1 1 2 1 1 1 1 62.656 64.917 4 2.9871E-07 17299 Miao_Sh-H9_proteinG_mass3_141226_03 85.988 1.129 41383 3632.4 3514.8 0 0 6417.1 7254.5 0 5329.3 0 0 7149.3 8085.9 2802 589 2751 26064;26065;26066;26067;26068;26069;26070;26071 28315;28316;28317;28318;28319;28320;28321;28322;28323 28323 9 VAPEEHPVLLTEAPLNPK Unmodified 1953.0571 0.057127534 524 P63261;P60709;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;G5E9R0;E7EVS6 ACTG1;ACTB Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 1 9 3 2 5 4 2 2 3 8 9 65.996 65.992 2;3;4 5.1032E-57 17803 Miao_Sh-H9_proteinG_mass3_141226_02 185.99 65.359 1276300 68768 61001 0 122130 100270 126970 102340 115320 126920 179170 121410 152030 2803 524 2752 26072;26073;26074;26075;26076;26077;26078;26079;26080;26081;26082;26083;26084;26085;26086;26087;26088;26089;26090;26091;26092;26093;26094;26095;26096;26097;26098;26099;26100;26101;26102;26103;26104;26105;26106;26107;26108;26109;26110;26111;26112;26113;26114;26115;26116;26117;26118;26119;26120;26121;26122 28324;28325;28326;28327;28328;28329;28330;28331;28332;28333;28334;28335;28336;28337;28338;28339;28340;28341;28342;28343;28344;28345;28346;28347;28348;28349;28350;28351;28352;28353;28354;28355;28356;28357;28358;28359;28360;28361;28362;28363;28364;28365;28366;28367;28368;28369;28370;28371;28372;28373;28374;28375;28376;28377;28378;28379;28380;28381;28382;28383;28384;28385;28386;28387;28388;28389;28390;28391;28392;28393;28394;28395;28396;28397;28398;28399;28400;28401;28402;28403;28404;28405;28406;28407;28408;28409;28410;28411 28389 87 VAQLEQVYIR Unmodified 1217.6768 0.67682195 32 P62318;B4DJP7 SNRPD3 Small nuclear ribonucleoprotein Sm D3 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 1 2 2 2 1 1 1 1 58.945 60.234 2;3 3.506E-69 14839 Miao_Sh-c_proteinG_mass3_141226_03 212.82 127.14 109350 3234.8 2066.7 2159.9 611.06 0 19844 1205.2 11663 9495.8 0 33807 25261 2804 32 2753 26123;26124;26125;26126;26127;26128;26129;26130;26131;26132;26133;26134;26135;26136;26137;26138;26139 28412;28413;28414;28415;28416;28417;28418;28419;28420;28421;28422;28423;28424;28425 28418 14 VAQVAEITYGQK Unmodified 1305.6929 0.69286595 121 O94905;E5RHW4;E5RJ09 ERLIN2 Erlin-2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 50.607 50.356 2 0.032994 6504 Miao_Sh-H9_Flag_mass3_141226_01 47.062 18.885 0 0 0 0 0 0 0 0 0 0 0 0 0 2805 121 2754 26140 28426 28426 1 VASGPSPGEGISPQSAQAPQAPGDNHVVPVLR Unmodified 3118.5796 0.57957411 573 Q14764 MVP Major vault protein yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 2 1 1 11 1 62.913 65.211 3;4 4.713E-63 17445 Miao_Sh-H9_proteinG_mass3_141226_03 146.6 137.76 233450 0 0 0 59510 0 62633 0 0 0 60051 2275.9 48984 2806 573 2755 26141;26142;26143;26144;26145;26146;26147;26148;26149;26150;26151;26152;26153;26154;26155;26156 28427;28428;28429;28430;28431;28432;28433;28434;28435;28436;28437;28438;28439;28440;28441;28442;28443;28444;28445;28446;28447;28448;28449;28450;28451;28452;28453;28454 28454 28 VATAQDDITGDGTTSNVLIIGELLK Unmodified 2543.333 0.33302762 444 P40227;B4DPJ8 CCT6A T-complex protein 1 subunit zeta yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 102.25 102.2 3 0.013018 24745 Miao_Sh-H9_Flag_mass3_141226_03 32.882 29.129 0 0 0 0 0 0 0 0 0 0 0 0 0 2807 444 2756 26157 28455 28455 1 VATVSLPR Unmodified 841.50215 0.50215205 95 CON__P00761 yes yes 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 4 5 3 51.44 49.757 2 1.8771E-19 11470 Miao_Sh-H9_proteinG_mass3_141226_01 178.83 74.383 1688100 52949 60460 66198 51719 50871 0 72187 0 102390 695970 1639 533740 + 2808 95 2757 26158;26159;26160;26161;26162;26163;26164;26165;26166;26167;26168;26169;26170;26171;26172;26173;26174;26175;26176 28456;28457;28458;28459;28460;28461;28462;28463;28464;28465;28466;28467;28468;28469;28470;28471;28472;28473;28474;28475;28476;28477;28478;28479;28480;28481;28482;28483;28484;28485;28486;28487;28488;28489;28490;28491;28492;28493;28494;28495;28496;28497;28498;28499;28500;28501;28502;28503;28504;28505;28506;28507;28508;28509;28510;28511;28512;28513;28514;28515;28516 28495 61 VATWFNQPAR Unmodified 1188.604 0.60399136 414 P26373;P26373-2;J3QSB4;H3BTH3 RPL13 60S ribosomal protein L13 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 3 2 4 5 4 2 3 3 3 2 3 57.568 59.416 2;3 2.1309E-84 9891 Miao_Sh-H9_Flag_mass3_141226_02 222.28 138.92 518760 8575.1 9209.2 12150 20272 26363 65623 52591 72337 50657 82977 68598 49410 2809 414 2758 26177;26178;26179;26180;26181;26182;26183;26184;26185;26186;26187;26188;26189;26190;26191;26192;26193;26194;26195;26196;26197;26198;26199;26200;26201;26202;26203;26204;26205;26206;26207;26208;26209;26210;26211 28517;28518;28519;28520;28521;28522;28523;28524;28525;28526;28527;28528;28529;28530;28531;28532;28533;28534;28535;28536;28537;28538;28539;28540;28541;28542;28543;28544;28545;28546;28547;28548;28549;28550;28551;28552;28553 28541 37 VAVGELTDEDVK Unmodified 1273.6402 0.64016167 204 P49736;H0Y8E6 MCM2 DNA replication licensing factor MCM2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 51.873 53.677 2 0.012863 13855 Miao_Sh-H9_proteinG_mass3_141226_01 59.116 30.912 0 0 0 0 0 0 0 0 0 0 0 0 0 2810 204 2759 26212;26213 28554;28555 28554 2 VAVGQEQAFSVNTR Unmodified 1504.7634 0.76340513 570 Q14315;Q14315-2 FLNC Filamin-C yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 52.737 53.889 2 1.917E-06 14017 Miao_Sh-H9_proteinG_mass3_141226_01 116.51 91.658 0 0 0 0 0 0 0 0 0 0 0 0 0 2811 570 2760 26214;26215;26216 28556;28557;28558 28557 3 VAVVAGYGDVGK Unmodified 1133.6081 0.60807369 403 P23526;P23526-2 AHCY Adenosylhomocysteinase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 49.486 50.339 2 0.0014207 12482 Miao_Sh-H9_proteinG_mass3_141226_01 90.793 56.406 0 0 0 0 0 0 0 0 0 0 0 0 0 2812 403 2761 26217 28559 28559 1 VAYVSFGPHAGK Unmodified 1231.635 0.63495714 126 P50914;E7EPB3 RPL14 60S ribosomal protein L14 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 4 1 2 1 2 3 2 2 2 4 4 60.134 58.708 2;3 0.00093392 6876 Miao_Sh-H9_Flag_mass3_141226_03 90.05 65.275 56887 1732.3 3537.8 1568.8 946.96 3073.6 19771 3083.3 5022.7 581.46 192.61 14119 3257.4 2813 126 2762 26218;26219;26220;26221;26222;26223;26224;26225;26226;26227;26228;26229;26230;26231;26232;26233;26234;26235;26236;26237;26238;26239;26240;26241;26242;26243;26244;26245;26246 28560;28561;28562;28563;28564;28565;28566;28567;28568;28569;28570;28571;28572;28573;28574;28575;28576;28577;28578;28579;28580;28581;28582;28583 28573 24 VCTLAIIDPGDSDIIR Unmodified 1756.9029 0.90293508 122 P62888;E5RI99 RPL30 60S ribosomal protein L30 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 3 2 3 2 2 4 3 91.168 86.218 2;3 1.0172E-12 16175 Miao_Sh-c_Flag_mass3_141226_02 125.39 97.653 35499 4944 0 1636.2 3527 3506.5 4106.3 0 0 5699.6 787.32 7119.2 4172.5 2814 122 2763 26247;26248;26249;26250;26251;26252;26253;26254;26255;26256;26257;26258;26259;26260;26261;26262;26263;26264;26265;26266;26267;26268;26269;26270 28584;28585;28586;28587;28588;28589;28590;28591;28592;28593;28594;28595;28596;28597;28598;28599;28600;28601;28602 28585 19 VDCQAYAQTCQK Unmodified 1470.6231 0.62314818 609 Q8IXB1;Q8IXB1-2 DNAJC10 DnaJ homolog subfamily C member 10 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 33.505 34.833 2 0.0059231 7181 Miao_Sh-H9_proteinG_mass3_141226_01 70.889 59.306 1108.6 0 0 0 0 0 0 0 0 0 614.76 493.86 0 2815 609 2764 26271;26272 28603 28603 1 VDDFLANEAK Unmodified 1120.5401 0.5400537 35 P52209;F5H7U0;B4DQJ8;K7EPF6;K7EMN2;K7EM49 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 2 1 50.127 51.38 2 0.012848 12979 Miao_Sh-H9_proteinG_mass3_141226_03 72.531 40.211 5817.6 0 0 0 0 0 0 0 0 1094.5 1767.9 0 2955.2 2816 35 2765 26273;26274;26275;26276 28604;28605 28605 2 VDEIFGQLR Unmodified 1075.5662 0.56620887 656 Q9NY12;Q9NY12-2 GAR1 H/ACA ribonucleoprotein complex subunit 1 yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 4 1 1 1 1 4 69.737 68.141 2 5.8902E-12 17378 Miao_Sh-c_proteinG_mass3_141226_03 138.08 94.31 352110 0 61370 508.42 3820.8 9723.7 10611 129810 127450 0 783.47 5929.7 2096.1 2817 656 2766 26277;26278;26279;26280;26281;26282;26283;26284;26285;26286;26287;26288;26289;26290;26291;26292 28606;28607;28608;28609;28610;28611;28612;28613;28614;28615;28616;28617;28618;28619 28613 13 VDELAHFLLR Unmodified 1211.6663 0.66625727 451 P43358;C9JZJ5;C9J9C2;C9JK50;C9JIR1 MAGEA4 Melanoma-associated antigen 4 yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 2 1 3 1 1 3 2 85.37 83.579 2;3 0.00024573 14096 Miao_Sh-c_Flag_mass3_141226_01 119.22 86.033 44085 0 3396 0 6120 8784.9 0 7957.3 0 5470.2 6546.5 4949.4 860.33 2818 451 2767 26293;26294;26295;26296;26297;26298;26299;26300;26301;26302;26303;26304;26305;26306;26307;26308 28620;28621;28622;28623;28624;28625;28626;28627;28628;28629;28630;28631;28632;28633;28634;28635 28620 16 VDEVPDGAVKPPTNK Unmodified 1564.8097 0.80968662 291 O75475;O75475-2;O75475-3 PSIP1 PC4 and SFRS1-interacting protein yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 2 1 41.543 42.837 3 0.0019714 10056 Miao_Sh-H9_proteinG_mass3_141226_01 65.467 47.88 6319.2 0 0 0 0 0 0 299.16 0 98.635 2096.6 2388.1 1436.7 2819 291 2768 26309;26310;26311;26312;26313;26314 28636;28637 28636 2 VDGVTQSSSNFQNSFTDQDSK Unmodified 2289.9986 0.99856261 110 CON__Q05B55 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 2 4 1 2 57.004 58.834 2;3 2.1881E-15 15342 Miao_Sh-H9_proteinG_mass3_141226_02 88.983 81.102 17443 0 0 0 3685.8 0 0 0 0 0 6857.4 0 6899.7 + 2820 110 2769 26315;26316;26317;26318;26319;26320;26321;26322;26323;26324;26325 28638;28639;28640;28641;28642;28643;28644;28645;28646;28647;28648;28649;28650;28651;28652;28653 28647 16 VDGVTQSSSNFQNSFTDQDSKK Unmodified 2418.0935 0.093525632 110 CON__Q05B55 yes yes 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 54.332 56.876 3 1.262E-19 14215 Miao_Sh-H9_proteinG_mass3_141226_01 122.35 107.83 6680.4 0 0 0 0 225.15 0 0 0 0 3581.1 494.62 2379.5 + 2821 110 2770 26326;26327;26328;26329;26330 28654;28655 28655 2 VDIEGPDVNIEGPEGK Unmodified 1666.805 0.80499517 550 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 60.903 61.738 2 0.0015606 11209 Miao_Sh-H9_Flag_mass3_141226_03 62.813 48.352 5068.8 0 0 0 0 0 0 878.25 0 0 2581.6 1609 0 2822 550 2771 26331;26332;26333;26334 28656;28657 28657 1 VDILDPALLR Unmodified 1123.6601 0.66010926 684 R4GNH3;P17980;E9PKD5;E9PM69 PSMC3 26S protease regulatory subunit 6A yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 1 1 1 2 1 82.487 83.269 2 0.0022553 15976 Miao_Sh-c_Flag_mass3_141226_01 98.04 69.082 22198 5028.8 4632.6 0 0 1096.5 0 6216.7 0 5223.2 0 0 0 2823 684 2772 26335;26336;26337;26338;26339;26340;26341;26342 28658;28659;28660;28661;28662;28663;28664 28658 7 VDIVAINDPFIDLNYMVYMFQYDSTHGK Unmodified 3307.557 0.55697268 316 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 119.79 119.64 3 0.030569 30112 Miao_Sh-H9_Flag_mass3_141226_01 25.207 20.901 0 0 0 0 0 0 0 0 0 0 0 0 0 2824 316 2773 26343 28665 28665 1 VDLGGFAGLFDLK Unmodified 1350.7184 0.71835242 395 P22102;B4DJ93 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 107.75 107.65 2 0.0051435 26479 Miao_Sh-H9_Flag_mass3_141226_02 64.798 38.386 1223.3 0 0 0 0 0 0 0 1223.3 0 0 0 0 2825 395 2774 26344 28666 28666 1 VDLLNQEIEFLK Unmodified 1459.7922 0.79224564 108 P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 2 3 4 3 1 2 2 2 99.881 96.377 2;3 2.3343E-06 19302 Miao_Sh-c_Flag_mass3_141226_02 132.79 104.43 27535 0 3335.4 0 3041.7 2498.8 1534.5 0 0 0 11565 5559.7 0 + 2826 108 2775 26345;26346;26347;26348;26349;26350;26351;26352;26353;26354;26355;26356;26357;26358;26359;26360;26361;26362;26363;26364 28667;28668;28669;28670;28671;28672;28673;28674;28675;28676;28677;28678;28679;28680;28681;28682;28683 28669 17 VDNDENEHQLSLR Unmodified 1567.7227 0.72266253 334 P06748;P06748-2;P06748-3;E5RGW4 NPM1 Nucleophosmin yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 1 2 3 1 4 4 4 3 3 43.82 43.938 2;3 3.2295E-125 9315 Miao_Sh-H9_proteinG_mass3_141226_01 236.05 192.55 391480 5362.6 4536.7 4678.4 4319.8 3959.2 76887 5146.4 6040.7 6344.8 107900 83570 82735 2827 334 2776 26365;26366;26367;26368;26369;26370;26371;26372;26373;26374;26375;26376;26377;26378;26379;26380;26381;26382;26383;26384;26385;26386;26387;26388;26389;26390;26391;26392;26393;26394 28684;28685;28686;28687;28688;28689;28690;28691;28692;28693;28694;28695;28696;28697;28698;28699;28700;28701;28702;28703;28704;28705;28706;28707;28708;28709;28710;28711;28712;28713;28714;28715;28716;28717;28718;28719;28720;28721;28722;28723;28724;28725;28726;28727;28728;28729;28730 28709 47 VDQGTLFELILAANYLDIK Unmodified 2135.1514 0.15142185 129 P63208;E7ERH2;F8W8N3;P63208-2 SKP1 S-phase kinase-associated protein 1 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 2 1 1 2 1 115.59 116.34 2;3 1.4831E-08 27929 Miao_Sh-c_Flag_mass3_141226_01 83.423 54.644 5620.6 430.19 0 4397.7 334.13 0 0 0 0 458.59 0 0 0 2828 129 2777 26395;26396;26397;26398;26399;26400;26401 28731;28732;28733;28734;28735 28731 5 VDQSILTGESVSVIK Unmodified 1573.8563 0.85630246 380 P16615;P16615-5;P16615-2;P16615-3;O14983;O14983-3;O14983-2 ATP2A2;ATP2A1 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 66.741 70.3 2 0.0024233 18548 Miao_Sh-c_proteinG_mass3_141226_03 62.813 48.381 0 0 0 0 0 0 0 0 0 0 0 0 0 2829 380 2778 26402;26403 28736;28737 28737 2 VDSLLENLEK Unmodified 1158.6132 0.61321864 50 P07910;P07910-2;G3V576;G3V4W0;B4DY08;G3V4C1;G3V2Q1;P07910-4;O60812;P07910-3;G3V5V7;G3V2D6 HNRNPC;HNRNPCL1 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 1 67.738 69.862 2 5.956E-19 19924 Miao_Sh-H9_proteinG_mass3_141226_02 167.11 106.86 85493 0 1026.4 0 10622 8706.5 23080 0 0 0 18654 10218 13187 2830 50 2779 26404;26405;26406;26407;26408;26409;26410;26411 28738;28739;28740;28741;28742;28743;28744;28745;28746;28747;28748;28749;28750 28746 13 VDVDVPDVNIEGPDAK Unmodified 1680.8206 0.82064524 550 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 68.943 69.614 2 0.027925 19962 Miao_Sh-H9_proteinG_mass3_141226_01 43.794 30.623 4562.7 0 721.78 0 826.33 0 0 0 1446.4 0 1366.2 201.93 0 2831 550 2780 26412;26413;26414;26415;26416 28751;28752 28751 2 VEAAEIVEGEDSAYSVR Unmodified 1822.8585 0.85848731 570 Q14315;Q14315-2 FLNC Filamin-C yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 65.983 66.81 2 0.003294 11886 Miao_Sh-H9_Flag_mass3_141226_02 53.565 38.774 1014.8 0 696.23 318.53 0 0 0 0 0 0 0 0 0 2832 570 2781 26417;26418;26419 28753;28754 28754 2 VEAAIALQVLISNQEK Unmodified 1724.9672 0.96724989 302 O95373 IPO7 Importin-7 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 109.84 96.256 3 0.025792 34207 Miao_Sh-c_proteinG_mass3_141226_03 39.91 29.536 0 0 0 0 0 0 0 0 0 0 0 0 0 2833 302 2782 26420 28755 28755 1 VEAKPEVQSQPPR Unmodified 1463.7732 0.77324153 668 Q9UN86;Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 2 2 1 30.565 32.088 2;3 1.3308E-24 6555 Miao_Sh-H9_proteinG_mass3_141226_01 162.13 116.53 9070.2 160.51 0 0 120.11 0 2244.3 0 0 0 2893.6 1891.5 1760.1 2834 668 2783 26421;26422;26423;26424;26425;26426;26427;26428 28756;28757;28758;28759;28760;28761 28757 6 VEAMLNDRRR Oxidation (M) 1274.6514 0.65135226 166 Q06481;F5H845;F5GZY0;Q06481-5;Q06481-4;Q06481-2;Q06481-3;Q06481-6;P05067;P05067-4;P05067-8;H7C104;H7C0V9;E9PEV0;E9PG40;P05067-10;P05067-3;P05067-5;P05067-6;P05067-7;P05067-11;P05067-9 APLP2;APP Amyloid-like protein 2;Amyloid beta A4 protein;N-APP;Soluble APP-alpha;Soluble APP-beta;C99;Beta-amyloid protein 42;Beta-amyloid protein 40;C83;P3(42);P3(40);C80;Gamma-secretase C-terminal fragment 59;Gamma-secretase C-terminal fragment 57;Gamma-secretase C-terminal fragment 50;C31 yes no 0 0 1 0 2 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 83.432 71.252 3 0.052032 24696 Miao_Sh-H9_proteinG_mass3_141226_01 40.994 16.156 3281.7 0 0 0 0 0 0 0 0 0 3281.7 0 0 2835 166 2784 26429 28762 28762 0 VEAQLQELQVK Unmodified 1283.7085 0.70851601 433 P35579 MYH9 Myosin-9 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 5 2 2 2 2 4 1 2 3 55.187 57.134 2;3 2.4478E-91 14805 Miao_Sh-H9_proteinG_mass3_141226_02 225.19 158.24 205420 976.79 5721.3 236.24 4799.5 5603.4 38300 6092.1 1856.9 3467.2 49074 51218 38073 2836 433 2785 26430;26431;26432;26433;26434;26435;26436;26437;26438;26439;26440;26441;26442;26443;26444;26445;26446;26447;26448;26449;26450;26451;26452;26453;26454;26455;26456 28763;28764;28765;28766;28767;28768;28769;28770;28771;28772;28773;28774;28775;28776;28777;28778;28779;28780;28781;28782;28783;28784;28785;28786;28787;28788;28789;28790;28791;28792;28793;28794;28795 28786 33 VEAQVYILSK Unmodified 1148.6441 0.64412484 465 P49411 TUFM Elongation factor Tu, mitochondrial yes yes 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 58.515 59.551 2 0.0197 8288 Miao_Sh-c_Flag_mass3_141226_01 66.663 20.273 5689.7 772.21 627.2 0 0 0 0 0 0 0 0 0 4290.3 2837 465 2786 26457;26458;26459 28796 28796 1 VEDPTFLNQLQSGVNR Unmodified 1815.9115 0.91152593 568 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 76.906 76.906 3 0.0062117 13928 Miao_Sh-c_Flag_mass3_141226_01 48.899 37.256 0 0 0 0 0 0 0 0 0 0 0 0 0 2838 568 2787 26460 28797 28797 1 VEDVSAVEIVGGATR Unmodified 1500.7784 0.77838649 625 Q92598;Q92598-2;Q92598-3;Q92598-4;B4DY72 HSPH1 Heat shock protein 105 kDa yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 65.145 65.145 2;3 0.0031625 9947 Miao_Sh-c_Flag_mass3_141226_03 60.489 44.903 3659.9 3659.9 0 0 0 0 0 0 0 0 0 0 0 2839 625 2788 26461;26462;26463 28798;28799;28800 28799 3 VEDYQLPDAK Unmodified 1176.5663 0.56626845 664 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 46.994 49.826 2 0.0018699 11821 Miao_Sh-H9_proteinG_mass3_141226_02 104.82 72.504 7369.4 0 0 0 0 0 0 0 0 0 0 4361.1 3008.4 2840 664 2789 26464;26465 28801;28802 28801 2 VEEEEER Unmodified 918.39306 0.39305511 433;434 P35579;P35579-2;P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH9;MYH10 Myosin-9;Myosin-10 no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 2 2 1 2 1 1 1 1 2 1 1 1 25.314 26.307 2 0.00346 2510 Miao_Sh-H9_Flag_mass3_141226_03 122.13 21.94 19899 856.99 877.93 847.66 1784.8 1555.6 2796.3 613.22 943.42 962.88 3190.6 3262.4 2207.6 2841 433;434 2790 26466;26467;26468;26469;26470;26471;26472;26473;26474;26475;26476;26477;26478;26479;26480;26481 28803;28804;28805;28806;28807;28808;28809;28810;28811;28812;28813;28814;28815;28816;28817;28818;28819 28817 17 VEGGTPLFTLR Unmodified 1188.6503 0.65027285 439 P36957;Q86SW4;B7Z5W8 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 71.275 71.876 2 0.033596 20657 Miao_Sh-H9_proteinG_mass3_141226_01 56.087 20.791 3897.1 0 1318.5 578.73 0 0 0 0 0 0 1999.9 0 0 2842 439 2791 26482;26483;26484;26485 28820;28821 28821 2 VEGITNQGK Unmodified 944.49271 0.49270958 663 Q9P2E9;Q9P2E9-2;V9GY78 RRBP1 Ribosome-binding protein 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 37.163 38.83 2 0.032065 4002 Miao_Sh-c_proteinG_mass3_141226_01 64.841 14.036 2491.2 0 0 0 488 1253.8 0 168.4 0 0 0 580.94 0 2843 663 2792 26486;26487;26488;26489 28822 28822 1 VEGTEPTTAFNLFVGNLNFNK Unmodified 2311.1485 0.14846174 389 P19338 NCL Nucleolin yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 3 3 2 1 1 2 4 1 1 107.75 104.47 2;3 1.4326E-30 22708 Miao_Sh-c_Flag_mass3_141226_03 119.76 79.979 44133 296.21 4566.3 958.84 10337 0 2066.6 5017.4 0 8948 0 8462.9 3479.2 2844 389 2793 26490;26491;26492;26493;26494;26495;26496;26497;26498;26499;26500;26501;26502;26503;26504;26505;26506;26507;26508;26509 28823;28824;28825;28826;28827;28828;28829;28830;28831;28832;28833;28834;28835;28836;28837;28838;28839;28840;28841;28842;28843;28844;28845;28846 28828 24 VEIAGPGFINVHLR Unmodified 1520.8463 0.8463469 480 P54136;P54136-2 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 2 1 91.574 83.228 3 0.0038158 13395 Miao_Sh-c_Flag_mass3_141226_01 57.434 47.779 4625.3 1619.9 0 0 0 0 0 0 0 0 1778.1 1227.4 0 2845 480 2794 26510;26511;26512;26513 28847;28848 28847 2 VEIATLTR Unmodified 901.52328 0.52328142 213 P25789;H0YMZ1;H0YL69;H0YN18;P25789-2 PSMA4 Proteasome subunit alpha type-4;Proteasome subunit alpha type yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 3 1 1 1 1 49.975 49.975 2 0.0010438 6663 Miao_Sh-H9_Flag_mass3_141226_01 120.15 56.59 8764.6 1474 289.65 0 0 0 0 1501.4 1594.4 1755.8 2149.4 0 0 2846 213 2795 26514;26515;26516;26517;26518;26519;26520;26521 28849;28850;28851;28852;28853;28854 28852 5 VEILANDQGNR Unmodified 1227.6208 0.62076364 382 P17066;P48741 HSPA6;HSPA7 Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 3 3 2 2 2 3 2 3 3 3 3 39.336 40.304 2;3 9.413E-45 7684 Miao_Sh-c_proteinG_mass3_141226_03 175.54 124.09 104910 5836 7073.2 6007.1 1793.2 1685.5 0 6266.8 5200.6 6042.2 27393 19612 17998 2847 382 2796 26522;26523;26524;26525;26526;26527;26528;26529;26530;26531;26532;26533;26534;26535;26536;26537;26538;26539;26540;26541;26542;26543;26544;26545;26546;26547;26548;26549;26550;26551;26552 28855;28856;28857;28858;28859;28860;28861;28862;28863;28864;28865;28866;28867;28868;28869;28870;28871;28872;28873;28874;28875;28876;28877;28878;28879;28880;28881;28882;28883;28884;28885;28886;28887;28888;28889;28890;28891;28892;28893;28894;28895;28896;28897;28898;28899;28900;28901;28902;28903;28904 28878 50 VEITYTPSDGTQK Unmodified 1437.6987 0.69873919 298 O75874 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 43.138 44.843 2 0.011932 10581 Miao_Sh-H9_proteinG_mass3_141226_03 63.181 44.049 859.02 0 33.244 0 0 0 0 0 0 0 0 0 825.78 2848 298 2797 26553;26554 28905 28905 0 VELQELNDR Unmodified 1114.5619 0.56185177 346 P08670;B0YJC4;P17661 VIM;DES Vimentin;Desmin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 2 48.533 50.538 2 3.6438E-21 10709 Miao_Sh-c_proteinG_mass3_141226_03 172.88 108.12 26859 602.55 697.13 0 0 0 12272 1124.5 0 0 0 11185 977.39 2849 346 2798 26555;26556;26557;26558;26559;26560;26561 28906;28907;28908;28909 28906 4 VELSDVQNPAISITENVLHFK Unmodified 2352.2325 0.23252572 661 Q9P035;B4DRF4 PTPLAD1 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 103.58 103.46 3 0.0056942 25072 Miao_Sh-H9_Flag_mass3_141226_03 41.798 33.696 7676.2 0 0 0 0 0 0 0 4285.7 3390.5 0 0 0 2850 661 2799 26562;26563;26564 28910;28911 28911 2 VELSQLR Unmodified 843.48142 0.48141661 450 P42766;F2Z388 RPL35 60S ribosomal protein L35 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 2 1 1 2 1 1 1 2 3 47.711 50.192 2 6.6479E-07 11013 Miao_Sh-H9_proteinG_mass3_141226_03 155.82 38.429 208280 3420.2 0 0 3122.5 3331.6 37894 3185.5 3802.3 0 62979 51752 38796 2851 450 2800 26565;26566;26567;26568;26569;26570;26571;26572;26573;26574;26575;26576;26577;26578;26579 28912;28913;28914;28915;28916;28917;28918;28919;28920;28921;28922;28923;28924;28925;28926;28927;28928;28929;28930;28931;28932;28933 28931 22 VEQATKPSFESGR Unmodified 1434.7103 0.71030693 201 P38159;H0Y6E7;H3BT71;P38159-2 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 1 1 2 3 2 3 33.88 35.879 2;3 0.0001304 7266 Miao_Sh-H9_proteinG_mass3_141226_01 104.17 72.681 18046 211.32 273.93 0 185.55 74.466 4237.1 0 0 0 3812 2727.3 6524.6 2852 201 2801 26580;26581;26582;26583;26584;26585;26586;26587;26588;26589;26590;26591;26592;26593;26594 28934;28935;28936;28937;28938;28939 28935 6 VEQIAAIAQELNELDYYDSHNVNTR Unmodified 2904.389 0.38897937 283 O43707;O43707-2 ACTN4 Alpha-actinin-4 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS 2 1 96.573 97.927 3;4 4.3948E-16 38510 Miao_Sh-H9_proteinG_mass3_141226_03 78.758 71.612 11895 0 0 0 11895 0 0 0 0 0 0 0 0 2853 283 2802 26595;26596;26597 28940;28941;28942 28942 2 VESLQEEIAFLK Unmodified 1404.75 0.75004648 346 P08670;B0YJC4;B0YJC5;Q5JVS8 VIM Vimentin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 2 1 1 1 1 1 2 95.706 91.211 2 0.00016264 19282 Miao_Sh-H9_Flag_mass3_141226_03 124.12 85.113 16758 1058.7 0 0 0 493.17 2951.4 2770.6 0 3415.4 2790.5 3278.6 0 2854 346 2803 26598;26599;26600;26601;26602;26603;26604;26605;26606 28943;28944;28945;28946;28947;28948 28946 6 VETFSGVYK Unmodified 1028.5179 0.51786169 496 P62081 RPS7 40S ribosomal protein S7 yes yes 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 2 1 1 1 1 1 1 1 1 50.046 51.39 2 0.00032037 11111 Miao_Sh-c_proteinG_mass3_141226_03 120.99 49.563 110210 2188.8 1836.8 270.41 2599.7 0 21160 4505.6 5027.5 5131 24948 21120 21424 2855 496 2804 26607;26608;26609;26610;26611;26612;26613;26614;26615;26616;26617;26618 28949;28950;28951;28952;28953;28954;28955;28956;28957;28958;28959;28960;28961;28962 28951 14 VETGVLKPGMVVTFAPVNVTTEVK Unmodified 2514.3767 0.37674711 527 P68104;Q5VTE0 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 yes no 0 0 0 0 1 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 85.016 85.016 3 0.028568 16591 Miao_Sh-c_Flag_mass3_141226_01 34.474 28.66 2189.8 2189.8 0 0 0 0 0 0 0 0 0 0 0 2856 527 2805 26619 28963 28963 1 VEVTEFEDIK Unmodified 1207.5972 0.59723423 351 Q01105;Q01105-2;P0DME0;Q01105-3;Q01105-4 SET;SETSIP Protein SET;Protein SETSIP yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 1 1 2 2 62.762 64.588 2 9.9943E-06 18337 Miao_Sh-H9_proteinG_mass3_141226_01 101.39 57.624 9908.4 0 0 0 0 0 2701.8 1182.5 0 0 3157.8 2866.3 0 2857 351 2806 26620;26621;26622;26623;26624;26625 28964;28965;28966 28965 2 VEVVEER Unmodified 858.4447 0.44469675 573 Q14764 MVP Major vault protein yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS 1 3 2 1 3 2 2 2 1 33.383 35.246 2 5.0796E-17 3295 Miao_Sh-c_proteinG_mass3_141226_01 172.14 76.604 25918 86.334 237.97 322.09 3738.2 4863.8 5598.8 0 450.47 0 0 6173.4 4447.3 2858 573 2807 26626;26627;26628;26629;26630;26631;26632;26633;26634;26635;26636;26637;26638;26639;26640;26641;26642 28967;28968;28969;28970;28971;28972;28973;28974 28968 8 VFDGIPPPYDK Unmodified 1246.6234 0.6233894 445 P40429;M0QYS1;Q6NVV1 RPL13A;RPL13AP3 60S ribosomal protein L13a;Putative 60S ribosomal protein L13a protein RPL13AP3 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 2 2 3 1 2 4 2 4 63.11 63.325 2 0.0090415 16730 Miao_Sh-H9_proteinG_mass3_141226_01 67.519 33.433 21862 0 881.88 960.61 4449.6 2007.8 112.66 2420.3 0 3193.2 2499.8 2230.1 3105.9 2859 445 2808 26643;26644;26645;26646;26647;26648;26649;26650;26651;26652;26653;26654;26655;26656;26657;26658;26659;26660;26661;26662;26663;26664 28975;28976;28977;28978;28979;28980;28981;28982;28983;28984;28985;28986;28987 28980 12 VFDPVPVGVTK Unmodified 1156.6492 0.64921022 548 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 61.984 62.853 2 0.0027996 15702 Miao_Sh-c_proteinG_mass3_141226_03 84.821 42.533 5543.4 0 0 0 0 0 0 528.17 0 0 2658.5 2356.7 0 2860 548 2809 26665;26666;26667;26668 28988;28989 28988 2 VFENIVAVLNK Unmodified 1244.7129 0.71287311 557 Q13077;Q13077-2 TRAF1 TNF receptor-associated factor 1 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 83.909 83.257 2 0.0005543 17478 Miao_Sh-H9_Flag_mass3_141226_01 119.94 78.487 2353.7 0 0 0 0 0 0 2353.7 0 0 0 0 0 2861 557 2810 26669;26670;26671 28990;28991;28992 28991 3 VFEVSLADLQNDEVAFR Unmodified 1950.9687 0.96870646 492 P61247;F5H4F9;H0Y8L7;E9PFI5;D6RAT0;D6RED7;D6RAS7;D6RB09;D6RG13;D6RGE0;D6RI02 RPS3A 40S ribosomal protein S3a yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 1 3 3 1 2 102.66 97.563 2;3 6.5934E-35 36063 Miao_Sh-H9_proteinG_mass3_141226_03 163.41 138.29 52570 224.68 0 0 7129.8 3114.8 6946.7 258.54 0 7009.8 9581.2 5213.5 13091 2862 492 2811 26672;26673;26674;26675;26676;26677;26678;26679;26680;26681;26682;26683;26684;26685;26686 28993;28994;28995;28996;28997;28998;28999;29000;29001;29002;29003;29004;29005;29006;29007;29008;29009;29010;29011;29012;29013;29014;29015;29016;29017 29008 25 VFEVSLADLQNDEVAFRK Unmodified 2079.0637 0.063669474 492 P61247;F5H4F9;H0Y8L7;E9PFI5;D6RAT0;D6RED7;D6RAS7;D6RB09;D6RG13;D6RGE0;D6RI02 RPS3A 40S ribosomal protein S3a yes no 0 0 0 0 1 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 88.461 88.085 3 0.027495 17695 Miao_Sh-c_Flag_mass3_141226_01 55.546 40.646 4051.9 2405.8 0 0 0 0 0 1646.2 0 0 0 0 0 2863 492 2812 26687;26688 29018 29018 1 VFGAPNVVEDEIDQYLSK Unmodified 2021.9946 0.99458686 613 Q8TAT6;Q8TAT6-2;I3L4U9 NPLOC4 Nuclear protein localization protein 4 homolog yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 105.83 105.33 2;3 0.011223 24861 Miao_Sh-H9_Flag_mass3_141226_01 41.186 31.387 0 0 0 0 0 0 0 0 0 0 0 0 0 2864 613 2813 26689;26690 29019;29020 29019 2 VFHAGFGVVLGEDK Unmodified 1473.7616 0.76161421 480 P54136;P54136-2;F5H3T8 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 69.079 69.129 3 0.028477 13032 Miao_Sh-H9_Flag_mass3_141226_03 43.594 30.317 0 0 0 0 0 0 0 0 0 0 0 0 0 2865 480 2814 26691 29021 29021 1 VFIGNLNTALVK Unmodified 1287.7551 0.75507227 592 Q9UKM9;Q9UKM9-2;Q5QPM2;Q5QPM0;Q5QPM1;Q5QPL9 RALY RNA-binding protein Raly yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 1 68.739 62.148 2 0.0011315 20189 Miao_Sh-c_proteinG_mass3_141226_03 88.338 22.265 4496.4 0 0 0 0 0 0 0 853.73 0 3642.7 0 0 2866 592 2815 26692;26693;26694 29022;29023 29022 2 VFIGNLNTLVVK Unmodified 1315.7864 0.7863724 50 P07910;P07910-2;G3V576;G3V4W0;B4DY08;G3V4C1;G3V2Q1;P07910-4;O60812;P07910-3;G3V555;G3V575;G3V4M8;G3V5X6;G3V3K6;G3V251;B4DSU6;G3V2H6 HNRNPC;HNRNPCL1 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 1 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 2 9 4 1 1 7 6 6 93.31 85.396 2 3.5445E-25 16952 Miao_Sh-c_proteinG_mass3_141226_02 157.47 122.78 96988 4910.9 0 0 24157 0 14238 1827.5 4810.3 4511.9 17131 15934 9468.1 2867 50 2816 26695;26696;26697;26698;26699;26700;26701;26702;26703;26704;26705;26706;26707;26708;26709;26710;26711;26712;26713;26714;26715;26716;26717;26718;26719;26720;26721;26722;26723;26724;26725;26726;26727;26728;26729;26730;26731;26732;26733;26734;26735 29024;29025;29026;29027;29028;29029;29030;29031;29032;29033;29034;29035;29036;29037;29038;29039;29040;29041;29042;29043;29044;29045;29046;29047;29048;29049;29050;29051;29052;29053;29054;29055;29056;29057;29058;29059;29060;29061;29062;29063;29064;29065;29066 29031 43 VFLENVIR Unmodified 988.57057 0.57056597 513 P62805 HIST1H4A Histone H4 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 4 2 2 1 2 2 4 2 78.247 76.529 2 1.2719E-60 19824 Miao_Sh-H9_proteinG_mass3_141226_02 209.87 129.5 361190 14999 25079 18085 35086 30318 33562 23192 39363 41687 37878 39534 22406 2868 513 2817 26736;26737;26738;26739;26740;26741;26742;26743;26744;26745;26746;26747;26748;26749;26750;26751;26752;26753;26754;26755;26756;26757;26758 29067;29068;29069;29070;29071;29072;29073;29074;29075;29076;29077;29078;29079;29080;29081;29082;29083;29084;29085;29086;29087;29088;29089;29090;29091;29092;29093;29094;29095;29096;29097;29098;29099;29100;29101;29102;29103;29104;29105;29106;29107;29108;29109;29110;29111;29112;29113;29114;29115;29116;29117;29118 29101 52 VFMENLMKK 2 Oxidation (M);2 GlyGly (K) 1398.6636 0.66355643 398 P22681 CBL E3 ubiquitin-protein ligase CBL yes yes 0 2 2 0 1 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 47.287 49.555 2 0.013449 6268 Miao_Sh-c_proteinG_mass3_141226_02 52.716 33.057 12354 0 0 0 0 3605.2 5333.2 0 1993 1423 0 0 0 2869 398 2818 26759;26760;26761;26762 29119 29119 51;52 1 VFMENLMKK Oxidation (M);2 GlyGly (K) 1382.6686 0.66864181 398 P22681 CBL E3 ubiquitin-protein ligase CBL yes yes 0 2 1 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 1 50.162 51.874 2 0.025791 7706 Miao_Sh-H9_Flag_mass3_141226_02 41.876 24.645 8285.4 156.5 0 0 1294.8 1651.8 0 0 3398.2 0 0 495.29 1288.8 2870 398 2818 26763;26764;26765;26766;26767;26768;26769 29120;29121 29121 51;52 2 VFNNIGADLLTGSESENK Unmodified 1906.9272 0.92723557 599 Q6P3W7;F8VSC5 SCYL2 SCY1-like protein 2 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 4 1 1 1 1 1 1 81.403 77.894 2;3 8.0066E-24 14508 Miao_Sh-c_Flag_mass3_141226_01 137.13 117.03 9695.1 2270.1 0 0 449 0 0 869.76 2415.2 0 882.72 2808.3 0 2871 599 2819 26770;26771;26772;26773;26774;26775;26776;26777;26778;26779 29122;29123;29124;29125;29126;29127;29128;29129;29130;29131 29124 10 VFNVFCLYGNVEK Unmodified 1587.7755 0.77554972 371 P14866;M0QXS5;P14866-2;M0R076;M0QYT0 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 2 1 116.68 103.8 2 0.00043349 36608 Miao_Sh-H9_proteinG_mass3_141226_01 84.173 68.081 5882 0 0 0 0 0 1561.7 0 0 0 4320.4 0 0 2872 371 2820 26780;26781;26782;26783;26784;26785;26786 29132;29133;29134;29135;29136;29137 29137 6 VFQFLNAK Unmodified 965.53345 0.53345218 81 P83731;C9JXB8;C9JNW5 RPL24 60S ribosomal protein L24 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 4 2 3 1 4 2 5 74.031 71.336 2 3.8831E-05 29328 Miao_Sh-H9_proteinG_mass3_141226_02 145.04 112.15 97593 3702 3848 0 9152.9 6891.8 13148 6440.2 7504.5 5787.9 15451 13440 12226 2873 81 2821 26787;26788;26789;26790;26791;26792;26793;26794;26795;26796;26797;26798;26799;26800;26801;26802;26803;26804;26805;26806;26807;26808;26809;26810;26811;26812;26813 29138;29139;29140;29141;29142;29143;29144;29145;29146;29147;29148;29149;29150;29151;29152;29153;29154;29155;29156;29157;29158;29159;29160;29161;29162;29163;29164;29165;29166;29167;29168;29169;29170;29171;29172;29173;29174;29175;29176 29167 39 VFSGLVSTGLK Unmodified 1106.6336 0.63356015 366 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 63.776 65.355 2 0.0015599 11547 Miao_Sh-H9_Flag_mass3_141226_01 86.114 46.568 19139 0 0 0 2196.2 0 3080.5 3137.4 0 4120.1 3372.5 3232.7 0 2874 366 2822 26814;26815;26816;26817;26818;26819 29177;29178;29179;29180;29181;29182;29183 29180 6 VFSIGPVFR Unmodified 1020.5757 0.57565135 372 P14868;Q68CR9 DARS Aspartate--tRNA ligase, cytoplasmic yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 79.668 80.295 2 0.053277 14534 Miao_Sh-c_Flag_mass3_141226_03 57.59 38.611 2873.5 0 0 1927.3 0 0 0 0 0 946.25 0 0 0 2875 372 2823 26820;26821 29184 29184 1 VFTSWTGGGAAASR Unmodified 1366.663 0.6629628 106 CON__P15636 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 14 4 9 7 11 5 6 9 6 8 13 56.24 57.214 2;3 1.4037E-215 14662 Miao_Sh-H9_proteinG_mass3_141226_01 269.95 223.11 3618300 169060 121470 152790 282650 249680 318980 370420 345460 382640 486950 420410 317810 + 2876 106 2824 26822;26823;26824;26825;26826;26827;26828;26829;26830;26831;26832;26833;26834;26835;26836;26837;26838;26839;26840;26841;26842;26843;26844;26845;26846;26847;26848;26849;26850;26851;26852;26853;26854;26855;26856;26857;26858;26859;26860;26861;26862;26863;26864;26865;26866;26867;26868;26869;26870;26871;26872;26873;26874;26875;26876;26877;26878;26879;26880;26881;26882;26883;26884;26885;26886;26887;26888;26889;26890;26891;26892;26893;26894;26895;26896;26897;26898;26899;26900;26901;26902;26903;26904;26905;26906;26907;26908;26909;26910;26911;26912;26913;26914;26915;26916 29185;29186;29187;29188;29189;29190;29191;29192;29193;29194;29195;29196;29197;29198;29199;29200;29201;29202;29203;29204;29205;29206;29207;29208;29209;29210;29211;29212;29213;29214;29215;29216;29217;29218;29219;29220;29221;29222;29223;29224;29225;29226;29227;29228;29229;29230;29231;29232;29233;29234;29235;29236;29237;29238;29239;29240;29241;29242;29243;29244;29245;29246;29247;29248;29249;29250;29251;29252;29253;29254;29255;29256;29257;29258;29259;29260;29261;29262;29263;29264;29265;29266;29267;29268;29269;29270;29271;29272;29273;29274;29275;29276;29277;29278;29279;29280;29281;29282;29283;29284;29285;29286;29287;29288;29289;29290;29291;29292;29293;29294;29295;29296;29297;29298;29299;29300;29301;29302;29303;29304;29305;29306;29307;29308;29309;29310;29311;29312;29313;29314;29315;29316;29317;29318;29319;29320;29321;29322;29323;29324;29325;29326;29327;29328;29329;29330;29331;29332;29333;29334;29335;29336;29337;29338;29339;29340;29341;29342;29343;29344;29345;29346;29347;29348;29349;29350;29351;29352;29353;29354;29355;29356;29357;29358;29359;29360;29361;29362;29363;29364;29365;29366;29367;29368;29369;29370;29371;29372;29373;29374;29375;29376;29377;29378;29379;29380;29381;29382;29383;29384;29385;29386;29387;29388;29389;29390;29391;29392;29393;29394;29395;29396;29397;29398;29399 29327 215 VFVGGLSPDTSEEQIK Unmodified 1704.857 0.85703074 271 O14979;O14979-3;O14979-2 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching 2 2 1 62.639 65.045 2 4.4852E-05 17772 Miao_Sh-H9_proteinG_mass3_141226_02 86.873 62.721 4554.1 0 0 0 0 0 0 0 0 0 0 4554.1 0 2877 271 2825 26917;26918;26919;26920;26921 29400;29401;29402;29403;29404;29405 29405 6 VGEVIVTK Unmodified 843.50657 0.50656873 354 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 1 1 1 37.263 38.403 2 0.025007 3565 Miao_Sh-c_Flag_mass3_141226_03 70.256 27.657 6364.3 660.38 556.43 0 247.93 236.87 0 644.07 0 645.29 0 1700.9 1672.4 2878 354 2826 26922;26923;26924;26925;26926;26927;26928;26929;26930 29406;29407;29408 29407 3 VGGLEEER Unmodified 887.43486 0.43486035 166 Q06481;F5H845;F5GZY0;Q06481-5;Q06481-4;Q06481-2;Q06481-3;Q06481-6 APLP2 Amyloid-like protein 2 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 2 1 1 2 32.464 33.249 2 0.0033921 3076 Miao_Sh-c_Flag_mass3_141226_03 112.41 50.304 2735.1 300.09 709.57 596.07 155.35 0 352.27 151.26 470.52 0 0 0 0 2879 166 2827 26931;26932;26933;26934;26935;26936;26937;26938;26939 29409;29410;29411 29410 3 VGINYQPPTVVPGGDLAK Unmodified 1823.9781 0.97814893 529 P68363 TUBA1B Tubulin alpha-1B chain no no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 5 2 2 1 1 4 5 6 7 10 72.897 69.719 2;3 7.6132E-10 23037 Miao_Sh-H9_proteinG_mass3_141226_01 89.374 70.542 276830 0 19499 8941.8 1584.9 33103 37218 28302 20076 27890 37954 26734 35528 2880 529 2828 26940;26941;26942;26943;26944;26945;26946;26947;26948;26949;26950;26951;26952;26953;26954;26955;26956;26957;26958;26959;26960;26961;26962;26963;26964;26965;26966;26967;26968;26969;26970;26971;26972;26973;26974;26975;26976;26977;26978;26979;26980;26981;26982;26983 29412;29413;29414;29415;29416;29417;29418;29419;29420;29421;29422;29423;29424;29425;29426;29427;29428;29429;29430;29431;29432;29433;29434;29435;29436;29437;29438;29439;29440;29441;29442;29443;29444;29445;29446;29447;29448;29449;29450;29451;29452;29453;29454;29455;29456;29457;29458;29459;29460;29461;29462;29463;29464;29465;29466;29467;29468;29469;29470;29471;29472;29473;29474;29475;29476;29477;29478;29479;29480;29481;29482;29483;29484;29485;29486 29449 75 VGLAVVGSVLGAFLTFPGLR Unmodified 1972.151 0.15096834 246 Q9NX61;K7EKY7;K7EQ34;U3KQT6;K7EPA3;Q9NX61-2 TMEM161A Transmembrane protein 161A yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 122.73 122.73 3 2.5433E-05 29808 Miao_Sh-c_Flag_mass3_141226_01 62.916 54.84 0 0 0 0 0 0 0 0 0 0 0 0 0 2881 246 2829 26984 29487 29487 1 VGLIAAR Unmodified 698.44391 0.44390889 521 P62917;E9PKU4;E9PP36 RPL8 60S ribosomal protein L8 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1 1 1 1 40.413 41.833 2 4.2303E-25 8144 Miao_Sh-c_proteinG_mass3_141226_03 185.69 102.46 39402 1073.8 1120.4 1085.7 947.56 840.87 7420.5 1009.7 1342 1258.6 8316.2 7542 7444.8 2882 521 2830 26985;26986;26987;26988;26989;26990;26991;26992;26993;26994;26995;26996 29488;29489;29490;29491;29492;29493;29494;29495;29496;29497;29498;29499;29500;29501;29502;29503;29504;29505;29506;29507;29508;29509;29510;29511;29512;29513;29514 29498 27 VGLPPLEK Unmodified 851.51165 0.5116541 484 P55084;P55084-2;B5MD38;F5GZQ3 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 53.278 56.252 2 0.0093112 12435 Miao_Sh-c_proteinG_mass3_141226_03 91.853 32.936 2429.7 183.44 0 0 0 0 1897.6 0 0 0 0 0 348.66 2883 484 2831 26997;26998;26999 29515 29515 1 VGLQVVAVK Unmodified 911.5804 0.58040237 354 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 52.419 54.466 2 6.9371E-06 13676 Miao_Sh-H9_proteinG_mass3_141226_02 133.23 87.899 24431 0 1029.2 0 0 0 5937.1 1612.6 0 0 6549.3 5063.2 4239.6 2884 354 2832 27000;27001;27002;27003;27004;27005;27006;27007 29516;29517;29518;29519;29520;29521;29522 29521 7 VGNLGLATSFFNER Unmodified 1523.7732 0.77324153 267 O00571;O00571-2 DDX3X ATP-dependent RNA helicase DDX3X yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 106.85 94.667 2 0.013714 33849 Miao_Sh-H9_proteinG_mass3_141226_01 52.372 25.929 0 0 0 0 0 0 0 0 0 0 0 0 0 2885 267 2833 27008 29523 29523 1 VGPATPSAQVGK Unmodified 1110.6033 0.60332266 134 Q13428;Q13428-6;Q13428-3;J3KQ96;E7ETY2;E9PHK9;Q13428-2;Q13428-8;Q13428-7;Q13428-4;Q13428-5 TCOF1 Treacle protein yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 35.858 36.61 2 0.014921 7689 Miao_Sh-H9_proteinG_mass3_141226_01 57.164 23.786 0 0 0 0 0 0 0 0 0 0 0 0 0 2886 134 2834 27009 29524 29524 1 VGQAVDVVGQAGKPK Unmodified 1451.8096 0.80962704 559 Q13200;E9PCS3;E7EW34 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 2 1 1 1 1 1 1 40.204 41.02 3 1.8758E-09 3831 Miao_Sh-c_Flag_mass3_141226_03 121.45 80.207 5244.7 98.274 553.17 888 0 0 634.73 1087.6 988.2 994.75 0 0 0 2887 559 2835 27010;27011;27012;27013;27014;27015;27016;27017 29525;29526;29527;29528;29529 29527 5 VGTDLLEEEITK Unmodified 1345.6977 0.69767655 422 P29692;P29692-2;E9PRY8;P29692-3;E9PQZ1;P29692-4;H0YE72;H0YE58 EEF1D Elongation factor 1-delta yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 1 1 1 70.555 71.788 2 4.5531E-12 19565 Miao_Sh-H9_proteinG_mass3_141226_03 143.55 84.848 13831 0 0 787.18 0 0 1575.6 5109.1 819.01 0 5540.5 0 0 2888 422 2836 27018;27019;27020;27021;27022;27023;27024;27025;27026 29530;29531;29532;29533;29534;29535 29535 6 VGVNGFGR Unmodified 804.42424 0.42423608 316 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 3 1 1 1 1 1 1 1 1 1 1 40.942 42.396 2 9.3222E-08 10023 Miao_Sh-H9_proteinG_mass3_141226_01 154.01 94.372 37196 1337 236.98 1559.1 956.54 1025.8 813.63 1433.5 195.71 1658.4 11086 8175 8718.3 2889 316 2837 27027;27028;27029;27030;27031;27032;27033;27034;27035;27036;27037;27038;27039;27040 29536;29537;29538;29539;29540;29541;29542;29543;29544;29545;29546;29547;29548;29549;29550;29551;29552;29553;29554 29548 19 VGWEQLLTTIAR Unmodified 1385.7667 0.76669959 283;362 O43707;O43707-2;F5GXS2;O43707-3;H7C144;H0YJ11;H0YJW3;P12814;P12814-2;P12814-3;P12814-4;H9KV75;H7C5W8 ACTN4;ACTN1 Alpha-actinin-4;Alpha-actinin-1 no no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching 1 2 2 1 1 2 1 1 110.23 106.11 2 1.6072E-25 22774 Miao_Sh-c_Flag_mass3_141226_02 161.23 113.62 36544 4427.5 0 0 11599 0 0 610.22 0 0 12360 7546.5 0 2890 283;362 2838 27041;27042;27043;27044;27045;27046;27047;27048;27049;27050;27051 29555;29556;29557;29558;29559;29560;29561;29562;29563;29564;29565 29557 11 VGYTPDWIFLLR Unmodified 1478.7922 0.79218606 535 Q00610;Q00610-2;P53675;J3KR87;P53675-2 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain 2 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 2 1 1 108.77 107 2 2.0431E-05 26976 Miao_Sh-H9_Flag_mass3_141226_03 130.1 94.19 33765 6775.8 6628.1 6337 0 0 0 4894.7 0 6347.5 2781.5 0 0 2891 535 2839 27052;27053;27054;27055;27056;27057;27058 29566;29567;29568;29569;29570;29571;29572;29573 29573 8 VHAELADVLTEAVVDSILAIK Unmodified 2205.2256 0.22564942 444 P40227;B4DPJ8;P40227-2 CCT6A T-complex protein 1 subunit zeta yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 3 2 2 1 2 3 3 120.56 121.33 3;4 2.3681E-34 29568 Miao_Sh-c_Flag_mass3_141226_02 132.74 122.18 94937 17471 4284.9 17565 0 7117.9 0 15457 16213 16830 0 0 0 2892 444 2840 27059;27060;27061;27062;27063;27064;27065;27066;27067;27068;27069;27070;27071;27072;27073;27074;27075 29574;29575;29576;29577;29578;29579;29580;29581;29582;29583;29584;29585;29586;29587;29588;29589;29590;29591;29592;29593;29594;29595;29596;29597;29598 29580 25 VHCCPHGAFCDLVHTR Unmodified 1964.8556 0.8556245 420 P28799;K7EMR1;K7EPL0;P28799-2 GRN Granulins;Acrogranin;Paragranulin;Granulin-1;Granulin-2;Granulin-3;Granulin-4;Granulin-5;Granulin-6;Granulin-7 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 48.128 48.729 4 0.010886 5263 Miao_Sh-c_proteinG_mass3_141226_01 42.314 37.768 674.91 0 0 0 551.8 0 0 123.11 0 0 0 0 0 2893 420 2841 27076;27077 29599 29599 1 VHIDIGADGR Unmodified 1051.5411 0.54105675 426 P31942;P31942-2;P31942-3;B4DHY1;P31942-6;P31942-5;P31942-4 HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 2 1 3 2 2 41.496 43.718 2;3 0.00098627 10002 Miao_Sh-H9_proteinG_mass3_141226_02 95.642 57.831 15254 0 0 0 251.98 0 3835.2 0 0 0 5007 3728.2 2431.3 2894 426 2842 27078;27079;27080;27081;27082;27083;27084;27085;27086;27087 29600;29601;29602;29603;29604;29605;29606;29607;29608;29609;29610 29606 11 VHIEIGPDGR Unmodified 1091.5724 0.57235688 199;472 P31943;G8JLB6;E9PCY7;H0YB39;P55795;F5GZT4;H0YBG7;H0YBD7;P52597 HNRNPH1;HNRNPH2;HNRNPF Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2;Heterogeneous nuclear ribonucleoprotein H2, N-terminally processed;Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed no no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 2 1 53.126 51.327 3 0.0064587 23641 Miao_Sh-H9_proteinG_mass3_141226_02 68.557 54.966 10595 0 342.3 377.94 0 0 2890.1 458.71 191.44 0 2616.6 3464.8 253.4 2895 199;472 2843 27088;27089;27090;27091;27092;27093;27094;27095;27096 29611;29612;29613;29614;29615;29616 29616 6 VHIGQVIMSIR Unmodified 1251.7122 0.7121616 182 P27635;H7C123;H7C2C5;F8W7C6;X1WI28;Q96L21 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 68.883 68.432 3 0.024727 12471 Miao_Sh-H9_Flag_mass3_141226_01 47.844 36.25 1108 0 0 0 0 0 0 1108 0 0 0 0 0 2896 182 2844 27097 29617 29617 1 VHLVGIDIFTGK Unmodified 1297.7394 0.73942221 225 P63241;I3L397;I3L504;P63241-2;Q6IS14;Q9GZV4;F8WCJ1;C9J7B5;C9J4W5 EIF5A;EIF5AL1;EIF5A2 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like;Eukaryotic translation initiation factor 5A-2 yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 2 1 1 1 92.683 87.961 2;3 0.00014865 35288 Miao_Sh-H9_proteinG_mass3_141226_01 101.39 81.937 29061 1626.3 2296.3 0 5062.6 1713.7 3178.8 6255.5 0 0 5001.7 3297.6 627.93 2897 225 2845 27098;27099;27100;27101;27102;27103;27104;27105;27106;27107 29618;29619;29620;29621;29622;29623;29624;29625;29626;29627;29628 29623 10 VHNEGLPAPIVR Unmodified 1300.7252 0.72516913 92;93 CON__ENSEMBL:ENSBTAP00000024462;CON__ENSEMBL:ENSBTAP00000024466 no no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 6 1 1 1 5 8 5 63.091 59.827 2;3 5.8659E-10 12078 Miao_Sh-H9_proteinG_mass3_141226_01 142.51 119.36 322760 0 128.52 0 0 14808 47893 145.66 902.79 272.72 84302 100440 73867 + 2898 92;93 2846 27108;27109;27110;27111;27112;27113;27114;27115;27116;27117;27118;27119;27120;27121;27122;27123;27124;27125;27126;27127;27128;27129;27130;27131;27132;27133;27134;27135;27136 29629;29630;29631;29632;29633;29634;29635;29636;29637;29638;29639;29640;29641;29642;29643;29644;29645;29646;29647;29648;29649;29650;29651;29652;29653;29654;29655;29656;29657;29658;29659;29660;29661;29662;29663;29664;29665;29666;29667;29668;29669;29670;29671;29672;29673;29674;29675;29676;29677;29678;29679;29680;29681;29682;29683;29684;29685;29686;29687;29688;29689 29649 61 VHNESILDQVWNIFSEASNSEPVNK Unmodified 2855.3726 0.37260103 654 Q9NX58 LYAR Cell growth-regulating nucleolar protein yes yes 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 113.31 113.81 3 1.657E-11 26636 Miao_Sh-c_Flag_mass3_141226_03 74.525 65.849 0 0 0 0 0 0 0 0 0 0 0 0 0 2899 654 2847 27137;27138 29690;29691 29691 2 VHTVEDYQAIVDAEWNILYDK Unmodified 2520.2173 0.21726958 638 Q99832;Q99832-3;F5GZK5;Q99832-4;Q99832-2;B7Z1C9 CCT7 T-complex protein 1 subunit eta yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 100.45 101.1 3 1.9827E-15 21804 Miao_Sh-c_Flag_mass3_141226_01 89.663 77.288 0 0 0 0 0 0 0 0 0 0 0 0 0 2900 638 2848 27139;27140 29692;29693 29692 2 VIAVYDLGGGTFDISILEIQK Unmodified 2250.2148 0.21475039 441 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 19 28 7 1 7 5 2 4 3 113.23 111.64 2;3 6.6373E-44 38171 Miao_Sh-H9_proteinG_mass3_141226_01 157 143.84 173610 8033.7 5619.2 0 23453 32188 20589 4727.3 0 9858.6 36991 16332 15815 2901 441 2849 27141;27142;27143;27144;27145;27146;27147;27148;27149;27150;27151;27152;27153;27154;27155;27156;27157;27158;27159;27160;27161;27162;27163;27164;27165;27166;27167;27168;27169;27170;27171;27172;27173;27174;27175;27176;27177;27178;27179;27180;27181;27182;27183;27184;27185;27186;27187;27188;27189;27190;27191;27192;27193;27194;27195;27196;27197;27198;27199;27200;27201;27202;27203;27204;27205;27206;27207;27208;27209;27210;27211;27212;27213;27214;27215;27216;27217;27218;27219;27220 29694;29695;29696;29697;29698;29699;29700;29701;29702;29703;29704;29705;29706;29707;29708;29709;29710;29711;29712;29713;29714;29715;29716;29717;29718;29719;29720;29721;29722;29723;29724;29725;29726;29727;29728;29729;29730;29731;29732;29733;29734;29735;29736;29737;29738;29739;29740;29741;29742;29743;29744;29745;29746;29747;29748;29749;29750;29751;29752;29753;29754;29755;29756;29757;29758;29759;29760;29761;29762;29763;29764;29765;29766;29767;29768;29769;29770;29771;29772;29773;29774;29775;29776;29777;29778;29779;29780;29781;29782;29783;29784;29785;29786;29787;29788;29789;29790;29791;29792 29778 98 VIDPATATSVDLR Unmodified 1356.7249 0.72489436 65 P50991;B7Z9L0;P50991-2;B7Z2F4 CCT4 T-complex protein 1 subunit delta yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 2 2 2 2 2 1 59.946 59.979 2 2.1522E-07 14933 Miao_Sh-c_proteinG_mass3_141226_03 130.65 65.118 37960 1976.3 3776.5 0 2814.5 1094.8 13254 0 488.39 4403.7 9642.3 0 509.6 2902 65 2850 27221;27222;27223;27224;27225;27226;27227;27228;27229;27230;27231;27232;27233;27234 29793;29794;29795;29796;29797;29798 29795 6 VIFGLFGK Unmodified 879.52182 0.52182486 400 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 81.459 83.74 2 0.050109 16115 Miao_Sh-c_Flag_mass3_141226_01 65.252 36.103 2425.6 692.24 0 0 0 1733.4 0 0 0 0 0 0 0 2903 400 2851 27235;27236 29799 29799 1 VIFSGSLDFFSDSFFNSAVQK Unmodified 2341.1267 0.12666366 136 P39656;E7EWT1 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 112.68 112.6 3 0.032788 27393 Miao_Sh-H9_Flag_mass3_141226_01 34.174 27.042 0 0 0 0 0 0 0 0 0 0 0 0 0 2904 136 2852 27237;27238 29800;29801 29800 2 VIGLSSDLQQVGGASAR Unmodified 1656.8795 0.87949752 21 O00303;H0YDT6;B4DEW9;B3KSH1 EIF3F Eukaryotic translation initiation factor 3 subunit F yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 66.483 66.031 2 0.0058949 11679 Miao_Sh-H9_Flag_mass3_141226_01 47.916 35.648 0 0 0 0 0 0 0 0 0 0 0 0 0 2905 21 2853 27239 29802 29802 1 VIGSELVQK Unmodified 971.56515 0.56514624 437 P35998;B7Z5E2 PSMC2 26S protease regulatory subunit 7 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 45.02 46.461 2 0.014162 5874 Miao_Sh-H9_Flag_mass3_141226_02 74.533 14.431 6812.2 937.04 0 0 0 81.377 0 0 1959.5 0 0 3834.3 0 2906 437 2854 27240;27241;27242;27243 29803 29803 1 VIGSGCNLDSAR Unmodified 1247.5928 0.59283433 309;336 P00338;P00338-3;P00338-2;P00338-5;P00338-4;P07864;Q6ZMR3;F5H5G7;F5H155;G3XAP5;F5H245;P07195;A8MW50 LDHA;LDHC;LDHAL6A;LDHB L-lactate dehydrogenase A chain;L-lactate dehydrogenase C chain;L-lactate dehydrogenase A-like 6A;L-lactate dehydrogenase;L-lactate dehydrogenase B chain no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 38.447 40.928 2 0.00055621 8581 Miao_Sh-H9_proteinG_mass3_141226_03 107.09 69.12 4785.4 0 0 0 0 0 0 0 0 0 0 2689.7 2095.7 2907 309;336 2855 27244;27245 29804 29804 1 VIHDNFGIVEGLMTTVHAITATQK Unmodified 2594.3527 0.35265763 316 P04406;P04406-2;E7EUT5 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 2 1 106.27 106.53 3;4 3.8658E-12 26079 Miao_Sh-c_proteinG_mass3_141226_01 79.426 70.046 8803.6 2094.5 0 0 4017.1 0 0 2692 0 0 0 0 0 2908 316 2856 27246;27247;27248;27249 29805;29806;29807;29808 29806 4 VINEPTAAALAYGLDK Unmodified 1644.8723 0.87228688 441 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 3 4 3 4 4 3 1 4 6 4 3 78.964 75.589 2;3 1.0485E-40 15150 Miao_Sh-c_proteinG_mass3_141226_02 179.14 153.03 871290 8106.5 6870.4 9536.4 149850 119220 163330 0 10810 8156.5 66527 118050 210830 2909 441 2857 27250;27251;27252;27253;27254;27255;27256;27257;27258;27259;27260;27261;27262;27263;27264;27265;27266;27267;27268;27269;27270;27271;27272;27273;27274;27275;27276;27277;27278;27279;27280;27281;27282;27283;27284;27285;27286;27287;27288;27289;27290 29809;29810;29811;29812;29813;29814;29815;29816;29817;29818;29819;29820;29821;29822;29823;29824;29825;29826;29827;29828;29829;29830;29831;29832;29833;29834;29835;29836;29837;29838;29839;29840;29841;29842;29843;29844;29845;29846;29847;29848;29849;29850;29851;29852;29853;29854;29855;29856;29857;29858;29859;29860;29861;29862;29863;29864;29865;29866;29867;29868;29869;29870;29871;29872;29873;29874;29875;29876;29877;29878;29879;29880;29881;29882;29883;29884;29885;29886;29887;29888;29889;29890;29891;29892;29893;29894;29895;29896;29897;29898;29899;29900;29901;29902;29903;29904;29905;29906;29907;29908;29909;29910;29911;29912;29913;29914;29915;29916;29917;29918 29832 109 VIPELNGK Unmodified 868.50182 0.5018177 316 P04406;P04406-2;E7EUT5 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1 1 44.766 45.844 2 0.0007449 10224 Miao_Sh-H9_proteinG_mass3_141226_03 121.99 46.678 56965 1740.7 1430.6 0 1023.8 968.9 0 1769.3 1901.6 1851.7 17702 15930 12647 2910 316 2858 27291;27292;27293;27294;27295;27296;27297;27298;27299;27300 29919;29920;29921;29922;29923;29924;29925;29926;29927;29928;29929;29930;29931;29932 29931 14 VIQEIVDK Unmodified 942.5386 0.53859714 49 P51114;P51114-2;P51114-3;E7EU85;E9PFF5;B4DXZ6;P51116 FXR1;FXR2 Fragile X mental retardation syndrome-related protein 1;Fragile X mental retardation syndrome-related protein 2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 1 41.502 43.833 2 0.00082737 8700 Miao_Sh-c_proteinG_mass3_141226_03 120.87 56.065 4209 0 0 307.42 0 0 2605.2 169.54 0 0 0 1126.8 0 2911 49 2859 27301;27302;27303;27304 29933 29933 1 VIQYLAHVASSHK Unmodified 1451.7885 0.78849767 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 46.219 48.123 3 0.0075497 5141 Miao_Sh-c_proteinG_mass3_141226_01 53.592 33.007 3213.7 593.07 0 0 1368.2 1252.5 0 0 0 0 0 0 0 2912 434 2860 27305;27306;27307 29934 29934 1 VIQYLAYVASSHK Unmodified 1477.7929 0.79291434 433 P35579;P35579-2;Q5BKV1 MYH9 Myosin-9 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 6 4 3 12 3 3 4 4 7 4 76.73 74.193 2;3 2.0791E-25 11747 Miao_Sh-c_proteinG_mass3_141226_01 166.62 115.33 243020 8179.4 9966.6 12317 37151 31364 18041 15549 18516 3580.5 25040 24455 38865 2913 433 2861 27308;27309;27310;27311;27312;27313;27314;27315;27316;27317;27318;27319;27320;27321;27322;27323;27324;27325;27326;27327;27328;27329;27330;27331;27332;27333;27334;27335;27336;27337;27338;27339;27340;27341;27342;27343;27344;27345;27346;27347;27348;27349;27350;27351;27352;27353;27354;27355;27356;27357;27358;27359;27360;27361;27362 29935;29936;29937;29938;29939;29940;29941;29942;29943;29944;29945;29946;29947;29948;29949;29950;29951;29952;29953;29954;29955;29956;29957;29958;29959;29960;29961;29962;29963;29964;29965;29966;29967;29968;29969;29970;29971;29972;29973;29974;29975;29976;29977;29978;29979;29980;29981;29982;29983;29984;29985;29986;29987;29988;29989;29990;29991;29992;29993;29994;29995;29996;29997;29998;29999;30000;30001;30002;30003;30004;30005;30006;30007;30008;30009;30010;30011 29946 76 VISELNGK Unmodified 858.48108 0.48108226 325 P05387 RPLP2 60S acidic ribosomal protein P2 yes yes 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 1 1 35.396 35.966 2 0.0065476 3525 Miao_Sh-H9_Flag_mass3_141226_03 98.458 21.084 4589.9 654.15 622.67 598.79 62.977 682.92 0 597.7 680.76 689.93 0 0 0 2914 325 2862 27363;27364;27365;27366;27367;27368;27369;27370 30012;30013;30014 30014 3 VISGVLQLGNIVFK Unmodified 1485.8919 0.89190011 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 2 3 2 2 2 2 4 1 2 2 2 105.53 101.06 2;3 7.413E-88 37582 Miao_Sh-H9_proteinG_mass3_141226_01 211.15 157.15 716780 6982.2 29728 8252.3 83370 95089 69399 43214 49070 36406 141020 78782 75469 2915 433 2863 27371;27372;27373;27374;27375;27376;27377;27378;27379;27380;27381;27382;27383;27384;27385;27386;27387;27388;27389;27390;27391;27392;27393;27394;27395;27396;27397;27398 30015;30016;30017;30018;30019;30020;30021;30022;30023;30024;30025;30026;30027;30028;30029;30030;30031;30032;30033;30034;30035;30036;30037;30038;30039;30040;30041;30042;30043;30044;30045;30046;30047;30048;30049;30050;30051;30052;30053;30054;30055;30056;30057;30058;30059;30060;30061;30062;30063;30064;30065;30066;30067;30068;30069;30070;30071;30072;30073;30074;30075;30076;30077;30078;30079;30080;30081;30082;30083;30084;30085;30086;30087;30088;30089;30090;30091;30092;30093;30094;30095;30096;30097;30098;30099;30100;30101;30102;30103;30104;30105;30106;30107;30108;30109;30110;30111;30112;30113;30114;30115;30116;30117;30118;30119;30120;30121;30122;30123;30124 30078 110 VISGVLQLGNIVFKK Unmodified 1613.9869 0.98686312 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 1 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 3 1 105.97 97.518 3 4.0128E-07 38727 Miao_Sh-H9_proteinG_mass3_141226_02 97.273 87.991 67813 0 0 0 13969 0 16437 3579 0 0 21618 0 12209 2916 433 2864 27399;27400;27401;27402;27403;27404;27405;27406 30125;30126;30127;30128;30129;30130;30131;30132;30133 30131 9 VITALVER Unmodified 899.54402 0.54401687 473 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 51.825 51.662 2 0.0038577 7206 Miao_Sh-H9_Flag_mass3_141226_03 110.41 45.841 9632 0 1128.3 0 0 0 0 2241.4 2647.1 3615.1 0 0 0 2917 473 2865 27407;27408;27409;27410 30134;30135;30136;30137 30137 4 VITEEEK Unmodified 846.43346 0.43346336 414 P26373;P26373-2;J3KS98;H3BUK8 RPL13 60S ribosomal protein L13 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 1 25.771 28.019 2 0.0095253 2641 Miao_Sh-c_Flag_mass3_141226_03 101.64 55.691 3066.4 0 0 275.16 13.282 449.38 996.16 0 0 0 1237.2 0 95.273 2918 414 2866 27411;27412;27413;27414;27415;27416;27417 30138;30139;30140;30141 30138 4 VIVDFSSPNIAK Unmodified 1288.7027 0.70270235 480 P54136;P54136-2 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 64.855 66.208 2 0.044856 11589 Miao_Sh-c_proteinG_mass3_141226_01 44.829 24.986 0 0 0 0 0 0 0 0 0 0 0 0 0 2919 480 2867 27418 30142 30142 1 VIYPAVEGR Unmodified 1002.5498 0.54983053 393 P21589;P21589-2 NT5E 5'-nucleotidase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 44.885 47.492 2 0.0052261 11123 Miao_Sh-H9_proteinG_mass3_141226_02 86.136 45.111 0 0 0 0 0 0 0 0 0 0 0 0 0 2920 393 2868 27419 30143 30143 1 VKPAPDETSFSEALLK Unmodified 1730.9091 0.90906631 552 Q12905;X6R6Z1 ILF2 Interleukin enhancer-binding factor 2 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 1 64.484 66.163 3 3.3088E-05 18105 Miao_Sh-H9_proteinG_mass3_141226_03 85.576 66.939 21343 1251.1 0 0 0 400.9 4121.6 0 2592.1 2176.7 3958.3 0 6842 2921 552 2869 27420;27421;27422;27423;27424;27425;27426 30144 30144 1 VKPLLQVSR Unmodified 1038.655 0.6549643 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 42.53 44.298 2 0.011778 9056 Miao_Sh-c_proteinG_mass3_141226_03 100.57 14.824 28001 310.29 295.73 227.54 0 0 10722 0 670.41 0 0 7122 8653.8 2922 433 2870 27427;27428;27429;27430;27431;27432;27433 30145;30146;30147 30145 3 VKPLLQVTR Unmodified 1052.6706 0.67061436 434;158 P35580;P35580-3;P35580-2;F8W6L6;P35580-4;Q7Z406;F2Z2U8;G8JLL9;Q7Z406-6;Q7Z406-2;Q7Z406-5;Q7Z406-4;M0QY43 MYH10;MYH14 Myosin-10;Myosin-14 no no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 49.911 50.098 3 1.5176E-07 10934 Miao_Sh-H9_proteinG_mass3_141226_01 147.4 88.801 14977 0 0 0 315.8 535.95 2859.8 0 0 0 3659.5 3337.6 4268.4 2923 434;158 2871 27434;27435;27436;27437;27438;27439;27440 30148;30149;30150;30151;30152;30153;30154;30155;30156;30157 30151 9 VLAELYVSDR Unmodified 1163.6186 0.61863837 284 O43776;K7EJ19;K7EIU7;K7EQ35;B4DG16 NARS Asparagine--tRNA ligase, cytoplasmic yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 67.559 66.74 2 0.006061 22700 Miao_Sh-H9_proteinG_mass3_141226_01 82.417 50.923 3299 0 0 0 0 1185 781.64 0 0 0 1332.4 0 0 2924 284 2872 27441;27442;27443 30158;30159 30158 2 VLAGETLSVNDPPDVLDR Unmodified 1908.9793 0.97927114 553 Q12906;Q12906-4;Q12906-5;Q12906-2;Q12906-6;Q12906-3;Q12906-7;K7EKJ9;K7EQR9 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 1 3 2 4 81.074 72.648 2;3 6.9692E-08 24879 Miao_Sh-H9_proteinG_mass3_141226_01 82.449 71.217 21896 0 0 978.29 8381.1 0 0 0 0 0 9819.9 777.81 1938.5 2925 553 2873 27444;27445;27446;27447;27448;27449;27450;27451;27452;27453;27454;27455;27456 30160;30161;30162;30163;30164;30165;30166;30167;30168;30169 30164 10 VLAGLIR Unmodified 740.49086 0.49085908 84 Q86VV8;J3KTD2;C9JTR3;Q86VV8-2;Q86VV8-4;Q86VV8-3 RTTN Rotatin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 2 2 2 61.729 60.954 2 0.0033264 15333 Miao_Sh-H9_proteinG_mass3_141226_01 131.42 62.331 20987 579.07 509.1 0 630.28 550.36 3505.1 0 0 1348.2 5455.1 4079.4 4329.9 2926 84 2874 27457;27458;27459;27460;27461;27462;27463;27464;27465;27466;27467;27468 30170;30171;30172;30173;30174;30175;30176;30177;30178;30179 30173 8 VLALSVETDYTFPLAEK Unmodified 1894.9928 0.99279594 326 P05388;F8VWS0;Q3B7A4;F8VW21;F8VZS0;F8W1K8 RPLP0 60S acidic ribosomal protein P0 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 2 1 2 3 1 110.42 97.773 2;3 1.9617E-06 34773 Miao_Sh-H9_proteinG_mass3_141226_01 88.283 64.648 14265 0 0 0 0 0 0 0 0 0 5731.6 4684.9 3848.4 2927 326 2875 27469;27470;27471;27472;27473;27474;27475;27476;27477;27478;27479 30180;30181;30182;30183;30184;30185;30186;30187;30188;30189;30190;30191;30192;30193 30185 14 VLANPGNSQVAR Unmodified 1224.6575 0.65748349 574 Q14974;J3QR48 KPNB1 Importin subunit beta-1 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 2 1 1 1 1 1 36.69 38.908 2;3 0.00097701 7340 Miao_Sh-H9_proteinG_mass3_141226_02 98.105 57.774 5829 0 211.81 193.3 0 2292.8 1062.6 109.78 0 0 1005.6 953.13 0 2928 574 2876 27480;27481;27482;27483;27484;27485;27486;27487;27488 30194;30195;30196;30197;30198;30199;30200 30200 7 VLAQNSGFDLQETLVK Unmodified 1760.9309 0.93086439 444 P40227;B4DPJ8;P40227-2 CCT6A T-complex protein 1 subunit zeta yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 1 4 1 1 2 1 1 2 84.489 80.192 2;3 3.6582E-09 13787 Miao_Sh-c_Flag_mass3_141226_03 106.6 86.074 10038 218.54 3434.1 0 0 0 0 2296.8 0 0 1878.5 2210 0 2929 444 2877 27489;27490;27491;27492;27493;27494;27495;27496;27497;27498;27499;27500;27501 30201;30202;30203;30204;30205;30206;30207;30208 30203 8 VLATAFDTTLGGR Unmodified 1320.7038 0.70376498 431 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 1 1 1 68.616 68.258 2 0.00024479 12816 Miao_Sh-H9_Flag_mass3_141226_02 96.059 55.335 10040 1766.3 0 1080.8 758.41 0 318.25 2483.2 2746.7 0 886.21 0 0 2930 431 2878 27502;27503;27504;27505;27506;27507;27508;27509;27510 30209;30210;30211;30212 30211 4 VLATVTK Unmodified 730.45889 0.45889025 542 Q02878;F8VZ45;U3KQR5;F8VZA3;F8VWR1;F8VU16 RPL6 60S ribosomal protein L6 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 32.308 31.355 2 0.051766 3453 Miao_Sh-H9_Flag_mass3_141226_01 66.073 11.916 0 0 0 0 0 0 0 0 0 0 0 0 0 2931 542 2879 27511 30213 30213 1 VLATVTKPVGGDK Unmodified 1283.7449 0.74490152 542 Q02878;F8VZ45;U3KQR5;F8VZA3;F8VWR1;F8VU16 RPL6 60S ribosomal protein L6 yes no 0 0 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 2 3 2 1 2 2 2 35.959 37.186 2;3 1.0755E-24 7866 Miao_Sh-H9_proteinG_mass3_141226_01 168.76 97.817 91890 1484.2 1352.6 1062.4 791.63 889.7 18170 1814.5 1490.4 1275.9 26543 19530 17486 2932 542 2880 27512;27513;27514;27515;27516;27517;27518;27519;27520;27521;27522;27523;27524;27525;27526;27527;27528;27529;27530;27531 30214;30215;30216;30217;30218;30219;30220;30221;30222;30223;30224;30225;30226;30227;30228;30229;30230;30231;30232;30233;30234;30235;30236;30237;30238;30239;30240;30241;30242;30243;30244;30245;30246 30234 32 VLCLAVAVGHVK Unmodified 1264.7326 0.73256269 519 P62906 RPL10A 60S ribosomal protein L10a yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 2 1 66.113 65.612 3 0.0017209 10177 Miao_Sh-c_proteinG_mass3_141226_01 74.849 60.614 10194 494.87 0 0 2101.7 1402.2 0 0 0 1130.2 4549.2 0 516.04 2933 519 2881 27532;27533;27534;27535;27536;27537;27538 30247;30248;30249 30247 3 VLDELTLAR Unmodified 1028.5866 0.58660996 97;102;109 P02533;CON__P02533;P19012;CON__P19012;CON__A2A4G1;A8MT21;B3KRA2;K7EMS3;C9JTG5;P08779;CON__P08779;Q04695;CON__Q04695;CON__Q9QWL7;F5GWP8;K7EPJ9 KRT14;KRT15;KRT19;KRT16;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 17 no no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 1 1 60.264 62.407 2 1.2811E-14 16713 Miao_Sh-H9_proteinG_mass3_141226_02 160.82 104.1 47628 624.38 771.3 0 4386.1 4277.1 8934.2 0 0 0 12928 7666 8041.5 + 2934 97;102;109 2882 27539;27540;27541;27542;27543;27544;27545;27546;27547 30250;30251;30252;30253;30254;30255;30256;30257;30258;30259;30260;30261;30262;30263;30264;30265 30260 16 VLDELTLTK Unmodified 1030.591 0.59102664 104 P13645;CON__P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 58.326 60.168 2 0.00024035 16413 Miao_Sh-H9_proteinG_mass3_141226_01 122.94 67.827 291890 0 0 0 0 4308.7 39585 18143 19853 39703 49736 53514 67050 + 2935 104 2883 27548;27549;27550;27551;27552;27553;27554;27555 30266;30267;30268;30269;30270;30271 30269 6 VLDFEHFLPMLQTVAK Unmodified 1886.9964 0.99644153 179;198 P60660;P60660-2;F8W1R7;G3V1V0;B7Z6Z4;G3V1Y7;F8VPF3;F8VZU9;F8W180;J3KND3;G8JLA2 MYL6;PDE6H Myosin light polypeptide 6 no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 4 2 1 1 2 2 1 2 1 2 104.78 102.36 3 7.3199E-10 23866 Miao_Sh-c_Flag_mass3_141226_02 113.52 96.747 175850 10074 0 12381 20306 27475 0 14526 20372 20194 27100 0 23418 2936 179;198 2884 27556;27557;27558;27559;27560;27561;27562;27563;27564;27565;27566;27567;27568;27569;27570;27571;27572;27573;27574 30272;30273;30274;30275;30276;30277;30278;30279;30280;30281;30282;30283;30284;30285;30286;30287;30288;30289;30290;30291;30292;30293;30294;30295;30296;30297;30298;30299;30300;30301;30302;30303;30304;30305;30306;30307;30308;30309;30310 30277 39 VLDFEHFLPMLQTVAK Oxidation (M) 1902.9914 0.99135615 179;198 P60660;P60660-2;F8W1R7;G3V1V0;B7Z6Z4;G3V1Y7;F8VPF3;F8VZU9;F8W180;J3KND3;G8JLA2 MYL6;PDE6H Myosin light polypeptide 6 no no 0 0 1 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 3 1 1 2 2 3 2 1 1 105.03 101.48 3 5.1394E-05 37709 Miao_Sh-H9_proteinG_mass3_141226_01 84.94 59.487 95759 0 0 0 9700.9 8396.1 9570.4 7823.1 7249.3 7607 33126 12286 0 2937 179;198 2884 27575;27576;27577;27578;27579;27580;27581;27582;27583;27584;27585;27586;27587;27588;27589;27590;27591;27592 30311;30312;30313;30314;30315;30316;30317;30318;30319;30320;30321;30322;30323;30324;30325;30326;30327;30328;30329 30325 20 19 VLDNYLTSPLPEEVDETSAEDEGVSQR Unmodified 2991.3833 0.38328487 263 O00299 CLIC1 Chloride intracellular channel protein 1 yes yes 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 2 82.354 82.354 3 6.6057E-06 26887 Miao_Sh-H9_proteinG_mass3_141226_01 53.679 48.289 3258.7 3258.7 0 0 0 0 0 0 0 0 0 0 0 2938 263 2885 27593;27594;27595;27596;27597 30330;30331;30332;30333;30334 30334 5 VLDPNTVFALVNYISFK Unmodified 1939.0455 0.045500215 107 CON__P34955 yes yes 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 2 1 1 120.61 116.84 3 0.0040093 31079 Miao_Sh-c_proteinG_mass3_141226_01 48.288 39.252 8269.5 0 0 2670.3 2573.1 0 0 0 0 2992.3 0 0 33.856 + 2939 107 2886 27598;27599;27600;27601;27602 30335;30336;30337 30337 3 VLDSGAPIK Unmodified 898.51238 0.51238239 331 P06576;H0YH81;F8VPV9;F8W079 ATP5B ATP synthase subunit beta, mitochondrial;ATP synthase subunit beta yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 34.046 40.011 2 0.041406 7651 Miao_Sh-c_proteinG_mass3_141226_03 57.859 12.777 0 0 0 0 0 0 0 0 0 0 0 0 0 2940 331 2887 27603 30338 30338 1 VLEALLPLK Unmodified 994.64267 0.64266828 464 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 76.453 59.461 2 0.042037 22280 Miao_Sh-H9_proteinG_mass3_141226_03 57.55 32.551 0 0 0 0 0 0 0 0 0 0 0 0 0 2941 464 2888 27604 30339 30339 1 VLEDSDLK Unmodified 917.47058 0.47057715 355 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 2 1 1 1 2 1 2 1 1 37.189 39.162 2 0.0078486 8144 Miao_Sh-H9_proteinG_mass3_141226_02 91.069 30.71 16876 0 0 2074.8 509.85 475.29 8125.6 2777.9 2912.5 0 0 0 0 2942 355 2889 27605;27606;27607;27608;27609;27610;27611;27612;27613;27614;27615;27616 30340;30341;30342;30343;30344;30345;30346;30347;30348 30348 9 VLEEANQAINPK Unmodified 1324.6987 0.69867961 79 Q92841;Q92841-3;C9JMU5;H3BLZ8;Q92841-1;Q92841-2 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 2 1 2 1 43.401 45.717 2 0.00048307 9295 Miao_Sh-c_proteinG_mass3_141226_03 116.03 82.763 4837.4 0 57.53 0 0 0 1541.1 0 0 0 1905.8 0 1333 2943 79 2890 27617;27618;27619;27620;27621;27622;27623 30349;30350;30351;30352;30353;30354 30349 6 VLEGNEQFINAAK Unmodified 1431.7358 0.73579339 18 P35030;B1AN99;P35030-5;P35030-3;P35030-2;P35030-4 PRSS3 Trypsin-3 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 53.856 56.362 2 0.00020631 7969 Miao_Sh-c_proteinG_mass3_141226_02 98.942 69.199 13523 0 0 0 992.56 2886 3952.8 0 0 2338.9 613.57 0 2739.3 2944 18 2891 27624;27625;27626;27627;27628;27629;27630 30355;30356;30357;30358;30359;30360;30361 30357 7 VLENAEGAR Unmodified 957.48796 0.48795855 441 P38646;D6RJI2;D6RA73 HSPA9 Stress-70 protein, mitochondrial yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 2 1 1 1 1 29.602 30.592 2 1.5103E-25 5674 Miao_Sh-H9_proteinG_mass3_141226_03 162.49 85.647 42616 521.83 593.39 436.89 3373.6 3648.8 12311 429.04 507.59 50.861 10036 10706 0 2945 441 2892 27631;27632;27633;27634;27635;27636;27637;27638;27639;27640;27641;27642;27643 30362;30363;30364;30365;30366;30367;30368;30369;30370;30371;30372;30373;30374;30375;30376;30377 30377 16 VLEQLTGQTPVFSK Unmodified 1545.8403 0.84025847 520 P62913;P62913-2;Q5VVC8;Q5VVC9 RPL11 60S ribosomal protein L11 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 3 2 3 2 3 6 2 3 1 5 3 4 65.947 68.049 2;3 4.5166E-49 19448 Miao_Sh-H9_proteinG_mass3_141226_01 176.25 139.57 90751 0 2641.7 3995.1 6132.3 9965.7 17711 9470.5 10849 4785.6 6238.3 6283.1 12678 2946 520 2893 27644;27645;27646;27647;27648;27649;27650;27651;27652;27653;27654;27655;27656;27657;27658;27659;27660;27661;27662;27663;27664;27665;27666;27667;27668;27669;27670;27671;27672;27673;27674;27675;27676;27677;27678;27679;27680 30378;30379;30380;30381;30382;30383;30384;30385;30386;30387;30388;30389;30390;30391;30392;30393;30394;30395;30396;30397;30398;30399;30400;30401;30402;30403;30404;30405;30406;30407;30408;30409;30410;30411;30412;30413;30414;30415;30416;30417;30418;30419;30420;30421;30422 30406 44 VLEVPPVVYSR Unmodified 1256.7129 0.71287311 44 O00154;F5GWE2;B4DUX0;K7EKP8;O00154-2;O00154-3;O00154-6;O00154-4;O00154-5;O00154-7 ACOT7 Cytosolic acyl coenzyme A thioester hydrolase yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 1 2 67.012 68.399 2 0.0033123 19314 Miao_Sh-H9_proteinG_mass3_141226_03 77.062 19.473 7355.7 284.67 0 753.51 1297.4 0 2127.2 912.44 0 0 1980.6 0 0 2947 44 2894 27681;27682;27683;27684;27685;27686;27687;27688;27689;27690 30423;30424;30425;30426;30427;30428 30428 6 VLFAPMR Unmodified 832.46293 0.46292977 573 Q14764;H3BQK6;H3BRL2;H3BUK7;H3BNF6;H3BP76 MVP Major vault protein yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching 1 1 2 1 1 59.422 59.011 2 0.024906 9401 Miao_Sh-c_proteinG_mass3_141226_01 88.734 53.629 294570 0 0 0 1427.8 1364.6 1278.4 0 0 0 1680.5 0 288820 2948 573 2895 27691;27692;27693;27694;27695;27696 30429;30430;30431;30432 30430 4 VLFPATGYLSIVWK Unmodified 1592.8967 0.89665113 464 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 107.82 107.07 2 0.0024943 25644 Miao_Sh-H9_Flag_mass3_141226_01 65.956 39.244 0 0 0 0 0 0 0 0 0 0 0 0 0 2949 464 2896 27697 30433 30433 1 VLGATLLPDLIQK Unmodified 1379.8388 0.8388019 149 P55786;E9PLK3;B7Z463;H0YDG0 NPEPPS Puromycin-sensitive aminopeptidase yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching 1 1 2 1 100.01 95.276 2 0.0041606 18217 Miao_Sh-c_Flag_mass3_141226_02 66.004 47.38 4463.6 0 0 0 0 0 0 0 0 2304.1 0 2159.5 0 2950 149 2897 27698;27699;27700;27701;27702 30434;30435;30436;30437;30438;30439 30434 6 VLGLVLLR Unmodified 881.60622 0.60622319 23 P14678;P63162;P14678-2;B3KVR1;J3QLE5;P14678-3 SNRPB;SNRPN Small nuclear ribonucleoprotein-associated proteins B and B';Small nuclear ribonucleoprotein-associated protein N yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 2 2 2 94.607 89.463 2 0.00041053 37236 Miao_Sh-H9_proteinG_mass3_141226_02 134.66 132.13 37827 2407.8 0 2204.2 5449.6 3227.5 3065.3 2420.1 3115.7 2743.3 4907.9 7318.2 967.35 2951 23 2898 27703;27704;27705;27706;27707;27708;27709;27710;27711;27712;27713;27714;27715;27716 30440;30441;30442;30443;30444;30445;30446;30447;30448;30449;30450 30448 11 VLGQLHGGPSSCSATGTNR Unmodified 1897.9065 0.90645733 106 CON__P15636 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 1 1 2 1 2 1 2 1 3 1 38.79 40.354 2;3 6.136E-43 8518 Miao_Sh-H9_proteinG_mass3_141226_03 166.3 128.69 37854 1892.9 1395.8 981.65 0 1561.6 7357.1 2659.5 3234.8 3302.7 0 8793.1 6674.7 + 2952 106 2899 27717;27718;27719;27720;27721;27722;27723;27724;27725;27726;27727;27728;27729;27730;27731;27732;27733 30451;30452;30453;30454;30455;30456;30457;30458;30459;30460;30461;30462;30463;30464;30465;30466;30467;30468;30469;30470;30471;30472;30473;30474;30475 30473 25 VLHEAEGHIVTCETNTGEVYR Unmodified 2413.1332 0.13322238 32 P62318;B4DJP7;H3BT13 SNRPD3 Small nuclear ribonucleoprotein Sm D3 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching 1 1 48.342 49.92 4 0.00010388 5923 Miao_Sh-c_proteinG_mass3_141226_02 59.585 49.087 2244.4 0 0 0 0 1242.8 0 0 1001.7 0 0 0 0 2953 32 2900 27734;27735 30476;30477 30476 1 VLIDPVSVQDK Unmodified 1211.6762 0.67615325 229 P41252;J3KR24;Q5TCC5;Q5TCC4 IARS Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 58.303 58.925 2 0.013292 15398 Miao_Sh-H9_proteinG_mass3_141226_02 66.267 23.931 7659.1 1438.1 0 0 1140.7 0 0 0 1205.8 0 2545.2 1329.3 0 2954 229 2901 27736;27737;27738;27739;27740;27741 30478;30479 30479 2 VLIEGSINSVR Unmodified 1185.6717 0.67173657 185 P59998;F8WCF6;F8WDD7;P59998-3;P59998-2;H7C0A3 ARPC4;ARPC4-TTLL3 Actin-related protein 2/3 complex subunit 4 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 2 2 1 53.527 57.467 2 0.004221 13640 Miao_Sh-c_proteinG_mass3_141226_03 94.767 46.344 0 0 0 0 0 0 0 0 0 0 0 0 0 2955 185 2902 27742;27743;27744;27745;27746 30480;30481;30482;30483;30484 30480 5 VLIGGDETPEGQR Unmodified 1369.6838 0.68375782 288 O60701;O60701-3;O60701-2 UGDH UDP-glucose 6-dehydrogenase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching 1 1 41.479 45.965 2 4.9301E-05 9702 Miao_Sh-c_proteinG_mass3_141226_03 87.831 60.576 0 0 0 0 0 0 0 0 0 0 0 0 0 2956 288 2903 27747;27748 30485;30486 30485 2 VLITTDLLAR Unmodified 1113.6758 0.67575932 488 P60842;Q14240;E7EQG2;Q14240-2;Q9NZE6 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 1 3 1 3 1 3 3 2 78.839 74.452 2;3 1.886E-09 15107 Miao_Sh-H9_Flag_mass3_141226_02 142 110.47 78031 5250.2 4528.1 3991.7 7379.7 542.99 10323 6248 8354.4 5156.6 11147 8949.4 6159.8 2957 488 2904 27749;27750;27751;27752;27753;27754;27755;27756;27757;27758;27759;27760;27761;27762;27763;27764;27765;27766;27767;27768;27769;27770 30487;30488;30489;30490;30491;30492;30493;30494;30495;30496;30497;30498;30499;30500;30501;30502;30503;30504;30505;30506;30507;30508;30509;30510;30511;30512;30513;30514;30515;30516;30517 30503 30 VLLDLSAFLK Unmodified 1117.6747 0.67469669 255 Q3ZCQ8;M0R0C3;M0R2F8;Q3ZCQ8-3;Q3ZCQ8-2;M0R003 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 1 1 1 1 1 104.23 103.46 2 0.0051501 38329 Miao_Sh-H9_proteinG_mass3_141226_01 83.862 37.4 11671 1985.7 0 0 1648.8 909.66 0 3165.7 0 3436.7 0 524.31 0 2958 255 2905 27771;27772;27773;27774;27775;27776;27777;27778;27779 30518;30519;30520;30521 30521 4 VLLESEQFLTELTR Unmodified 1676.8985 0.89850163 440 P37108;H0YLA2 SRP14 Signal recognition particle 14 kDa protein yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 4 2 3 1 1 2 2 2 2 103.44 99.796 2;3 6.8837E-58 21960 Miao_Sh-H9_Flag_mass3_141226_01 196.18 130.34 79014 6889 0 0 466.6 9846.5 0 8301.1 6135.1 14608 12292 12177 8299.1 2959 440 2906 27780;27781;27782;27783;27784;27785;27786;27787;27788;27789;27790;27791;27792;27793;27794;27795;27796;27797;27798;27799;27800;27801 30522;30523;30524;30525;30526;30527;30528;30529;30530;30531;30532;30533;30534;30535;30536;30537;30538;30539;30540;30541;30542;30543;30544;30545;30546;30547;30548 30535 27 VLLGETGK Unmodified 815.47527 0.4752686 254 P62280;M0QZC5;M0R1H6 RPS11 40S ribosomal protein S11 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 2 1 1 1 37.392 38.345 2 0.0029992 7156 Miao_Sh-c_proteinG_mass3_141226_03 113.71 48.93 40388 1496 129.74 1213.8 962.48 0 7813.8 1439.7 1334.9 1367 10318 8018.4 6294.8 2960 254 2907 27802;27803;27804;27805;27806;27807;27808;27809;27810;27811;27812;27813 30549;30550;30551;30552;30553;30554;30555;30556;30557;30558;30559;30560;30561;30562;30563 30554 15 VLLGVGDPK Unmodified 896.53312 0.53311783 266 O00567;Q5JXT2 NOP56 Nucleolar protein 56 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 48.483 49.899 2 0.025731 11678 Miao_Sh-H9_proteinG_mass3_141226_03 67.881 23.27 2652.7 0 96.176 0 0 0 0 229.26 0 0 0 1161.9 1165.3 2961 266 2908 27814;27815;27816;27817 30564 30564 1 VLLPEYGGTK Unmodified 1075.5914 0.59136099 67 P61604;B8ZZL8;B8ZZ54 HSPE1 10 kDa heat shock protein, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 1 1 2 1 1 56.01 56.277 2 0.0050105 13704 Miao_Sh-H9_proteinG_mass3_141226_03 97.597 53.48 5496.5 959.87 227.71 0 0 0 0 0 0 0 4308.9 0 0 2962 67 2909 27818;27819;27820;27821;27822;27823 30565;30566;30567;30568 30568 4 VLNSYWVGEDSTYK Unmodified 1659.7781 0.77805214 128 P61313;E7EQV9;E7ENU7;E7EX53 RPL15 60S ribosomal protein L15;Ribosomal protein L15 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 2 2 1 3 66.46 67.669 2 1.3501E-09 18566 Miao_Sh-H9_proteinG_mass3_141226_03 132.08 90.05 17943 2168 0 0 0 3447.9 0 3111.4 3099.7 0 0 5262.5 853.43 2963 128 2910 27824;27825;27826;27827;27828;27829;27830;27831;27832;27833;27834;27835;27836;27837 30569;30570;30571;30572;30573;30574;30575;30576;30577;30578;30579;30580;30581;30582;30583;30584;30585 30584 17 VLNTNIDGR Unmodified 1000.5302 0.53015772 503 P62269 RPS18 40S ribosomal protein S18 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 2 1 1 2 2 1 1 2 3 4 39.508 41.021 2 8.6946E-07 8858 Miao_Sh-H9_proteinG_mass3_141226_02 140.17 52.693 29296 978.45 937.26 983.15 647.22 0 5960.5 1024.5 927.93 959.52 1305.6 8222.5 7349.7 2964 503 2911 27838;27839;27840;27841;27842;27843;27844;27845;27846;27847;27848;27849;27850;27851;27852;27853;27854;27855;27856;27857;27858;27859;27860 30586;30587;30588;30589;30590;30591;30592;30593;30594;30595;30596;30597;30598;30599;30600;30601;30602;30603;30604;30605 30603 20 VLPGVDALSNI Unmodified 1096.6128 0.61282471 63 P00558;B7Z7A9;E7ERH5 PGK1 Phosphoglycerate kinase 1 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 3 3 3 3 2 1 2 3 1 2 1 85.996 84.47 2 0.00090706 19431 Miao_Sh-H9_Flag_mass3_141226_01 117.02 66.896 1747400 250280 245000 3624.6 325360 264590 1062.6 5265.3 345770 290760 0 11403 4294 2965 63 2912 27861;27862;27863;27864;27865;27866;27867;27868;27869;27870;27871;27872;27873;27874;27875;27876;27877;27878;27879;27880;27881;27882;27883;27884;27885 30606;30607;30608;30609;30610;30611;30612;30613;30614;30615;30616;30617 30612 12 VLPHLIPLSIENNLNLNQFNSFISVIK Unmodified 3075.7121 0.71209183 599 Q6P3W7;F8VSC5 SCYL2 SCY1-like protein 2 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 2 1 113.68 113.72 3 8.4603E-14 27904 Miao_Sh-H9_Flag_mass3_141226_01 72.474 69.849 0 0 0 0 0 0 0 0 0 0 0 0 0 2966 599 2913 27886;27887;27888;27889 30618;30619;30620;30621 30620 4 VLPSIVNEVLK Unmodified 1209.7333 0.7332742 161 Q99623;F5GY37;J3KPX7;Q99623-2;F5H3X6;F5GWA7 PHB2 Prohibitin-2 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 85.393 86.044 2 0.055731 16634 Miao_Sh-c_Flag_mass3_141226_03 50.149 31.018 2945.5 0 0 2065.5 0 0 0 0 880 0 0 0 0 2967 161 2914 27890;27891 30622 30622 1 VLPVGDEVVGIVGYTSK Unmodified 1730.9455 0.94545182 393 P21589;P21589-2;Q96B60 NT5E 5'-nucleotidase yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 2 94.25 86.205 3 0.0042808 16599 Miao_Sh-c_Flag_mass3_141226_01 47.548 37.857 9677.9 0 2505.2 0 0 0 1204.1 788.77 2060.3 0 0 0 3119.5 2968 393 2915 27892;27893;27894;27895;27896;27897;27898 30623;30624;30625;30626;30627 30623 5 VLQALEGLK Unmodified 969.58588 0.58588168 442 P39019 RPS19 40S ribosomal protein S19 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1 2 2 1 64.834 64.558 2 7.4911E-08 16394 Miao_Sh-H9_proteinG_mass3_141226_02 148.91 80.544 232670 10988 7678.8 8725.7 271.26 10732 29786 16572 14290 13283 57455 37700 25189 2969 442 2916 27899;27900;27901;27902;27903;27904;27905;27906;27907;27908;27909;27910;27911;27912 30628;30629;30630;30631;30632;30633;30634;30635;30636;30637;30638;30639;30640;30641;30642;30643;30644;30645;30646;30647;30648;30649;30650;30651;30652;30653;30654;30655;30656;30657;30658;30659;30660;30661;30662;30663;30664;30665;30666;30667;30668;30669;30670;30671 30663 44 VLQATVVAVGSGSK Unmodified 1314.7507 0.75071518 67 P61604;B8ZZL8;S4R3N1 HSPE1;HSPE1-MOB4 10 kDa heat shock protein, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 50.958 51.672 2 0.0056075 12705 Miao_Sh-H9_proteinG_mass3_141226_01 61.444 22.652 5327.5 0 0 0 0 0 0 1338.6 1351.1 0 2121.3 0 516.55 2970 67 2917 27913;27914;27915;27916 30672;30673 30673 2 VLQSALAAIR Unmodified 1040.6342 0.63422886 552 Q12905 ILF2 Interleukin enhancer-binding factor 2 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 1 1 1 1 2 1 60.017 61.401 2 5.9983E-17 14957 Miao_Sh-c_proteinG_mass3_141226_03 150.46 60.759 29159 0 0 0 3721.9 0 9340.7 2502.5 362.95 2829.8 5949.5 4451.7 0 2971 552 2918 27917;27918;27919;27920;27921;27922;27923;27924;27925;27926 30674;30675;30676;30677;30678;30679 30675 6 VLSAPPHFHFGQTNR Unmodified 1706.8641 0.86412223 417 P26641;B4DTG2 EEF1G Elongation factor 1-gamma yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 53.664 54.836 4 0.00079803 7475 Miao_Sh-c_proteinG_mass3_141226_01 62.861 48.777 8975.8 0 0 1791.3 1105.5 154.67 0 1791.3 4133.1 0 0 0 0 2972 417 2919 27927;27928;27929;27930;27931 30680 30680 1 VLSIGDGIAR Unmodified 999.57129 0.57129425 410 P25705;P25705-2;P25705-3;K7EK77;K7ERX7;K7EJP1;K7EQH4 ATP5A1 ATP synthase subunit alpha, mitochondrial yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 2 1 1 1 56.134 57.374 2 1.2568E-16 14758 Miao_Sh-H9_proteinG_mass3_141226_02 145.9 70.715 25152 1526.6 2881.3 0 1047 0 4541.7 2747.1 2851.9 0 6361.6 0 3195.2 2973 410 2920 27932;27933;27934;27935;27936;27937;27938;27939;27940;27941;27942;27943 30681;30682;30683;30684;30685;30686;30687;30688;30689;30690;30691;30692;30693 30691 13 VLTEIIASR Unmodified 1000.5917 0.59169534 144 P08758;E9PHT9;D6RBL5 ANXA5 Annexin A5;Annexin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 55.142 56.708 2 0.024322 13910 Miao_Sh-H9_proteinG_mass3_141226_03 68.557 20.709 5572.2 0 0 0 0 0 0 0 0 1172.9 1562.6 1431.1 1405.7 2974 144 2921 27944;27945;27946;27947 30694 30694 1 VLTELLEQER Unmodified 1228.6663 0.66631685 134 Q13428;Q13428-6;Q13428-3;J3KQ96;E7ETY2;E9PHK9;Q13428-2;Q13428-8;Q13428-7;Q13428-4 TCOF1 Treacle protein yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 2 1 1 1 1 1 2 64.98 67.071 2 0.0001921 11529 Miao_Sh-c_proteinG_mass3_141226_02 126.71 65.546 14605 1798.7 1611.1 0 0 3056.3 873.4 0 3454.9 0 0 719.55 3091.4 2975 134 2922 27948;27949;27950;27951;27952;27953;27954;27955;27956;27957;27958 30695;30696;30697;30698;30699;30700;30701;30702 30698 8 VLTIDPTEFK Unmodified 1161.6281 0.62814043 478 P53621;P53621-2 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 2 1 71.194 70.534 2 0.022389 13314 Miao_Sh-c_proteinG_mass3_141226_02 64.374 27.979 8667.5 0 0 0 1926.9 2146.6 0 1336.2 0 1190.7 730.94 1336.2 0 2976 478 2923 27959;27960;27961;27962;27963;27964;27965 30703;30704 30703 2 VLTQPSSVSGSLGQR Unmodified 1514.8053 0.80526994 90 CON__ENSEMBL:ENSBTAP00000014147 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 2 1 2 1 1 49.25 51.864 2;3 0.00015031 11085 Miao_Sh-c_proteinG_mass3_141226_03 103.32 65.624 14238 0 0 0 0 0 6452.4 0 1552.8 0 1799.7 1991.2 2442 + 2977 90 2924 27966;27967;27968;27969;27970;27971;27972 30705;30706;30707;30708 30706 4 VLTRDKR GlyGly (K) 1000.5778 0.57777661 469 P50990;P50990-2;P50990-3 CCT8 T-complex protein 1 subunit theta yes no 0 1 0 0 2 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 53.511 56.418 2 0.044983 13191 Miao_Sh-c_proteinG_mass3_141226_03 78.616 22.069 2659.4 0 0 0 0 0 1645.4 1014 0 0 0 0 0 2978 469 2925 27973;27974 30709 30709 1 VLTVINQTQK Unmodified 1142.6659 0.66592292 450 P42766;F2Z388 RPL35 60S ribosomal protein L35 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 1 2 1 1 1 2 2 1 43.111 44.818 2;3 7.561E-163 10344 Miao_Sh-H9_proteinG_mass3_141226_02 261.58 130.36 364840 8668.8 5507 7090.6 5795.6 4839.4 87561 9772.9 7664 7848 91956 64830 63311 2979 450 2926 27975;27976;27977;27978;27979;27980;27981;27982;27983;27984;27985;27986;27987;27988;27989;27990;27991;27992 30710;30711;30712;30713;30714;30715;30716;30717;30718;30719;30720;30721;30722;30723;30724;30725;30726;30727;30728;30729;30730;30731;30732;30733;30734;30735;30736;30737;30738;30739 30735 30 VLVDQTTGLSR Unmodified 1187.651 0.65100113 46 Q15717;B4DVB8 ELAVL1 ELAV-like protein 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 46.901 47.477 2 0.0095537 11158 Miao_Sh-H9_proteinG_mass3_141226_02 71.888 27.493 6569.2 0 0 0 0 0 0 0 534.94 579.78 1961.7 3492.8 0 2980 46 2927 27993;27994;27995;27996 30740 30740 1 VNDTIQIDLETGK Unmodified 1444.7409 0.74093835 511 P62701 RPS4X 40S ribosomal protein S4, X isoform yes yes 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 4 2 2 5 71.547 61.246 2;3 3.7797E-57 22241 Miao_Sh-H9_proteinG_mass3_141226_01 194.23 132.14 9460.4 0 0 0 0 0 0 0 0 869.66 8428.5 0 162.23 2981 511 2928 27997;27998;27999;28000;28001;28002;28003;28004;28005;28006;28007;28008;28009;28010;28011;28012;28013;28014 30741;30742;30743;30744;30745;30746;30747;30748;30749;30750;30751;30752;30753;30754;30755;30756;30757;30758;30759 30751 19 VNETTEFLSK Unmodified 1166.5819 0.58191851 664 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 2 49.91 51.715 2 0.0022353 12273 Miao_Sh-H9_proteinG_mass3_141226_03 98.156 59.194 15902 0 0 0 0 0 0 272.34 0 0 5815.7 3521.5 6292.3 2982 664 2929 28015;28016;28017;28018;28019 30760;30761;30762;30763;30764 30763 5 VNFAMNVGK Unmodified 978.49569 0.49568646 368 P14618;P14618-2;P14618-3;Q504U3 PKM;PKM2 Pyruvate kinase PKM;Pyruvate kinase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 48.208 54.173 2 0.045689 12465 Miao_Sh-c_proteinG_mass3_141226_03 56.258 34.127 0 0 0 0 0 0 0 0 0 0 0 0 0 2983 368 2930 28020 30765 30765 1 VNFHFILFNNVDGHLYELDGR Unmodified 2518.2393 0.23934243 113 P09936;D6RE83;D6R956 UCHL1 Ubiquitin carboxyl-terminal hydrolase isozyme L1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 118.33 106.15 3 0.017137 38510 Miao_Sh-H9_proteinG_mass3_141226_01 40.723 26.737 3897.5 0 0 0 0 0 0 0 0 0 3897.5 0 0 2984 113 2931 28021 30766 30766 0 VNFPENGFLSPDK Unmodified 1462.7092 0.70924429 62 P31689;B7Z5C0 DNAJA1 DnaJ homolog subfamily A member 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 2 78.874 75.947 2 0.0026763 14199 Miao_Sh-H9_Flag_mass3_141226_01 71.879 37.186 11287 0 0 0 0 768.6 0 1416.2 6704.5 1711.9 0 0 686.15 2985 62 2932 28022;28023;28024;28025;28026;28027 30767;30768 30767 2 VNFTVDQIR Unmodified 1090.5771 0.57710791 366 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 1 1 58.104 60.059 2 0.0011175 9764 Miao_Sh-H9_Flag_mass3_141226_03 117.53 74.084 38436 927.18 0 0 0 1040.4 5720.7 3141.6 0 4513.3 9552 7556.4 5983.9 2986 366 2933 28028;28029;28030;28031;28032;28033;28034;28035 30769;30770;30771;30772;30773 30772 5 VNGSLAVSR Unmodified 901.49813 0.49812931 297;296 O75688-2;C9JIR6;O75688-4;B8ZZF0;O75688-5;P35813;P35813-2;P35813-3;O75688 PPM1B;PPM1A Protein phosphatase 1B;Protein phosphatase 1A no no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 34.869 34.718 2 1.8988E-29 3274 Miao_Sh-H9_Flag_mass3_141226_02 183.78 110.16 12612 0 0 2251.2 0 0 0 5845.2 4515.3 0 0 0 0 2987 297;296 2934 28036;28037;28038;28039 30774;30775;30776;30777;30778;30779 30778 6 VNIDFEPFK Unmodified 1107.5601 0.56006086 510 P62495;B7Z7P8;Q96CG1;I3L492;D6RJE8 ETF1 Eukaryotic peptide chain release factor subunit 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 1 1 68.506 65.889 2 0.0026966 21120 Miao_Sh-c_proteinG_mass3_141226_03 91.867 68.513 6359 0 0 0 363.16 0 2001 430.89 0 0 2527 0 1036.9 2988 510 2935 28040;28041;28042;28043;28044 30780 30780 1 VNIIQFGTGYK Unmodified 1238.6659 0.66592292 664 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 2 1 1 2 69.818 70.42 2 2.7863E-10 20485 Miao_Sh-H9_proteinG_mass3_141226_02 148.76 110.01 22555 511.2 1228.3 0 5797.7 0 174.76 0 0 0 5320.8 3846.1 5675.9 2989 664 2936 28045;28046;28047;28048;28049;28050;28051;28052;28053 30781;30782;30783;30784;30785;30786;30787 30786 7 VNPLSLVEIILHVVR Unmodified 1700.0349 0.034875949 146 Q9UNM6;E9PL38;J3KNQ3;Q9UNM6-2;E9PQG3 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 1 121.38 121.74 3 2.1316E-08 32258 Miao_Sh-H9_Flag_mass3_141226_02 120.75 93.417 59261 11439 9550.9 9783.3 2804.1 0 0 6996 9295.8 9391.8 0 0 0 2990 146 2937 28054;28055;28056;28057;28058;28059;28060 30788;30789;30790;30791;30792;30793;30794;30795;30796;30797;30798;30799 30796 12 VNPTVFFDIAVDGEPLGR Unmodified 1944.9945 0.99452728 522 P62937;F8WE65;C9J5S7;E5RIZ5 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 2 109.3 104.39 2;3 3.4054E-25 37966 Miao_Sh-H9_proteinG_mass3_141226_01 114.55 84.065 62529 0 0 0 6245.9 7893.1 0 5433.9 7258.2 0 19230 7680.8 8786.7 2991 522 2938 28061;28062;28063;28064;28065;28066;28067;28068;28069 30800;30801;30802;30803;30804;30805;30806;30807;30808;30809;30810;30811;30812;30813;30814;30815;30816 30809 16 VNPTVFFDIAVDGEPLGR Acetyl (Protein N-term) 1987.0051 0.005091963 522 P62937;F8WE65;C9J5S7;E5RIZ5 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 1 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 2 1 2 118.66 118.78 2 5.6605E-07 31660 Miao_Sh-c_proteinG_mass3_141226_01 98.175 89.183 10062 446.53 0 0 4004.4 0 0 486.71 0 5124.1 0 0 0 2992 522 2938 28070;28071;28072;28073;28074;28075 30817;30818;30819 30817 3 VNQPASFAVQLNGAR Unmodified 1570.8216 0.82158871 570 Q14315;Q14315-2 FLNC Filamin-C yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 63.283 63.333 2 0.02167 10903 Miao_Sh-H9_Flag_mass3_141226_03 46.318 28.245 0 0 0 0 0 0 0 0 0 0 0 0 0 2993 570 2939 28076 30820 30820 1 VNTLIRPDGEK Unmodified 1240.6776 0.67755023 9 P62750;H7BY10;K7EJV9;K7ERT8;A8MUS3;K7EMA7 RPL23A 60S ribosomal protein L23a yes no 0 0 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 2 2 1 2 3 2 3 1 3 3 5 43.479 42.682 2;3 3.1167E-14 8001 Miao_Sh-H9_proteinG_mass3_141226_02 154.85 98.594 173880 3007 3028.5 2647.9 284.67 1821.5 12131 3350.2 3974.9 404.6 79364 32951 30912 2994 9 2940 28077;28078;28079;28080;28081;28082;28083;28084;28085;28086;28087;28088;28089;28090;28091;28092;28093;28094;28095;28096;28097;28098;28099;28100;28101;28102;28103;28104;28105 30821;30822;30823;30824;30825;30826;30827;30828;30829;30830;30831;30832;30833;30834;30835;30836;30837;30838;30839;30840;30841;30842;30843;30844;30845;30846;30847;30848;30849;30850;30851;30852;30853;30854;30855;30856;30857;30858;30859;30860;30861;30862;30863;30864;30865;30866;30867 30858 46 VNVAGLVLAGSADFK Unmodified 1459.8035 0.80347903 510 P62495;B7Z7P8;Q96CG1;I3L492 ETF1 Eukaryotic peptide chain release factor subunit 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 2 4 3 2 3 14 103.03 95.366 2;3 3.1559E-16 35210 Miao_Sh-H9_proteinG_mass3_141226_01 147.75 111.84 76411 0 0 0 11346 2177.1 19762 0 0 0 17535 19017 6573 2995 510 2941 28106;28107;28108;28109;28110;28111;28112;28113;28114;28115;28116;28117;28118;28119;28120;28121;28122;28123;28124;28125;28126;28127;28128;28129;28130;28131;28132;28133 30868;30869;30870;30871;30872;30873;30874;30875;30876;30877;30878;30879;30880;30881;30882;30883;30884;30885;30886;30887;30888;30889;30890;30891;30892;30893;30894;30895;30896;30897;30898;30899;30900;30901;30902;30903;30904;30905;30906;30907;30908;30909;30910;30911;30912 30884 45 VPAINVNDSVTK Unmodified 1255.6772 0.67721588 403 P23526;P23526-2 AHCY Adenosylhomocysteinase yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 1 3 48.974 50.742 2 5.4758E-07 11822 Miao_Sh-H9_proteinG_mass3_141226_03 127.78 100.99 16707 0 276.73 0 0 0 1249.5 0 1362.8 1811 5946 5885.6 175.65 2996 403 2942 28134;28135;28136;28137;28138;28139;28140;28141;28142;28143;28144 30913;30914;30915;30916;30917;30918;30919;30920;30921 30921 9 VPDEHFSTLLAYLEGLQGR Unmodified 2144.0902 0.090218576 82 Q9BRJ6;C9JQV0;H7C0T1;H7C2R9 C7orf50 Uncharacterized protein C7orf50 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 2 2 1 109.71 106.5 3 2.8444E-09 23311 Miao_Sh-c_Flag_mass3_141226_01 82.01 68.592 18634 4080.1 0 0 0 5881.6 8672.5 0 0 0 0 0 0 2997 82 2943 28145;28146;28147;28148;28149;28150;28151;28152;28153 30922;30923;30924;30925;30926;30927;30928;30929 30922 8 VPEWVDTVK Unmodified 1071.5601 0.56006086 442 P39019;M0R2L9;M0QXK4;M0QYF7;M0R140 RPS19 40S ribosomal protein S19 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 3 1 1 1 3 1 1 1 1 1 1 58.971 60.433 2 5.7104E-25 14790 Miao_Sh-c_proteinG_mass3_141226_03 157.34 106.64 547930 335.74 611.22 21129 28930 34100 1001 42589 69752 57022 65056 122570 104840 2998 442 2944 28154;28155;28156;28157;28158;28159;28160;28161;28162;28163;28164;28165;28166;28167;28168;28169 30930;30931;30932;30933;30934;30935;30936;30937;30938;30939;30940 30935 11 VPFALFESFPEDFYVEGLPEGVPFR Unmodified 2887.4109 0.41088401 531 P78347;P78347-2;P78347-4;P78347-3 GTF2I General transcription factor II-I yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 116.98 117.33 3 0.00014339 28175 Miao_Sh-c_Flag_mass3_141226_02 45.735 37.318 2573.6 0 2573.6 0 0 0 0 0 0 0 0 0 0 2999 531 2945 28170 30941 30941 1 VPHNAAVQVYDYR Unmodified 1530.7579 0.75792582 573 Q14764 MVP Major vault protein yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 3 6 2 6 1 2 8 7 4 62.659 60.841 2;3 1.0007E-17 12302 Miao_Sh-H9_proteinG_mass3_141226_01 152.32 114.98 307840 0 780.03 2250.7 20514 19075 57739 1347.3 2966.6 0 62690 89460 51014 3000 573 2946 28171;28172;28173;28174;28175;28176;28177;28178;28179;28180;28181;28182;28183;28184;28185;28186;28187;28188;28189;28190;28191;28192;28193;28194;28195;28196;28197;28198;28199;28200;28201;28202;28203;28204;28205;28206;28207;28208;28209;28210 30942;30943;30944;30945;30946;30947;30948;30949;30950;30951;30952;30953;30954;30955;30956;30957;30958;30959;30960;30961;30962;30963;30964;30965;30966;30967;30968;30969;30970;30971;30972;30973;30974;30975;30976;30977;30978;30979;30980;30981;30982;30983;30984;30985;30986;30987;30988;30989;30990 30960 49 VPKPEPIPEPK Unmodified 1229.702 0.70197407 12 Q8IYB3;A9Z1X7;E9PCT1;Q8IYB3-2;B4DED5;M0R088 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 37.731 40.813 3 0.019138 8641 Miao_Sh-c_proteinG_mass3_141226_03 61.233 42.608 1572.4 21.805 0 0 0 0 1550.6 0 0 0 0 0 0 3001 12 2947 28211;28212 30991 30991 1 VPLIGSLPEAR Unmodified 1150.671 0.67100829 655 Q9NXS2-3;Q9NXS2;K7EQG1 QPCTL Glutaminyl-peptide cyclotransferase-like protein yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 2 1 1 71.264 69.698 2 0.0062392 20244 Miao_Sh-H9_proteinG_mass3_141226_01 79.659 51.485 5428 0 0 0 0 812.72 2201.6 0 0 0 1292.1 1121.6 0 3002 655 2948 28213;28214;28215;28216;28217;28218 30992;30993;30994;30995 30995 4 VPLLLEEQGVVDYFLR Unmodified 1889.0299 0.02985015 40 P17812;B4DR64;B7Z9C4 CTPS1 CTP synthase 1 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 2 1 1 1 1 109.87 111.3 3 1.0038E-05 26615 Miao_Sh-c_Flag_mass3_141226_02 84.759 71.246 5640.7 0 2276.1 354.31 0 599.94 0 0 2410.3 0 0 0 0 3003 40 2949 28219;28220;28221;28222;28223;28224;28225;28226 30996;30997;30998;30999;31000;31001 30997 6 VPPAINQFTQALDR Unmodified 1568.8311 0.83109076 509 P62424;Q5T8U3 RPL7A 60S ribosomal protein L7a yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 5 3 3 3 5 4 2 8 4 3 5 87.607 83.233 2;3 8.3117E-73 30501 Miao_Sh-H9_proteinG_mass3_141226_01 206.7 170.28 181770 7906.8 11721 11145 18814 20369 25000 16450 8111.4 7598.7 17933 12702 24014 3004 509 2950 28227;28228;28229;28230;28231;28232;28233;28234;28235;28236;28237;28238;28239;28240;28241;28242;28243;28244;28245;28246;28247;28248;28249;28250;28251;28252;28253;28254;28255;28256;28257;28258;28259;28260;28261;28262;28263;28264;28265;28266;28267;28268;28269;28270;28271;28272;28273 31002;31003;31004;31005;31006;31007;31008;31009;31010;31011;31012;31013;31014;31015;31016;31017;31018;31019;31020;31021;31022;31023;31024;31025;31026;31027;31028;31029;31030;31031;31032;31033;31034;31035;31036;31037;31038;31039;31040;31041;31042;31043;31044;31045;31046;31047;31048;31049;31050;31051;31052;31053;31054;31055;31056;31057;31058;31059;31060;31061;31062;31063;31064;31065;31066;31067;31068;31069;31070;31071;31072;31073;31074;31075;31076;31077;31078;31079;31080;31081;31082;31083;31084;31085;31086;31087;31088;31089;31090;31091;31092;31093;31094;31095;31096;31097;31098 31068 96 VPPPPPIAR Unmodified 942.56509 0.56508666 50 P07910;P07910-2;G3V576;G3V4W0;B4DY08;G3V4C1;G3V2Q1;P07910-4;P07910-3;G3V555;G3V5V7;G3V575;G3V2D6 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 4 40.818 43.266 2 9.4557E-06 9567 Miao_Sh-H9_proteinG_mass3_141226_03 120.46 59.979 31191 0 0 0 452.12 659.21 11278 447.57 0 0 9587.8 8766.9 0 3005 50 2951 28274;28275;28276;28277;28278;28279;28280;28281;28282;28283;28284 31099;31100;31101;31102;31103;31104;31105;31106;31107;31108;31109;31110;31111;31112;31113;31114;31115;31116;31117;31118;31119;31120;31121;31122;31123;31124 31123 26 VPQLPITNFNR Unmodified 1297.7143 0.71427009 570 Q14315;Q14315-2 FLNC Filamin-C yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 71.935 73.188 2 0.027032 20323 Miao_Sh-H9_proteinG_mass3_141226_02 58.511 33.673 2736 0 0 0 625.48 0 0 0 362.32 0 0 1748.2 0 3006 570 2952 28285;28286;28287 31125 31125 1 VPSLVGSFIR Unmodified 1073.6233 0.62332982 532 P78417;Q5TA02;P78417-3 GSTO1 Glutathione S-transferase omega-1 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 2 1 1 1 1 1 1 82.403 79.339 2 0.0025773 16787 Miao_Sh-H9_Flag_mass3_141226_03 96.171 63.851 13641 2121.4 2618.8 660.01 0 0 713.18 3136.3 0 3872.2 0 518.99 0 3007 532 2953 28288;28289;28290;28291;28292;28293;28294;28295;28296;28297 31126;31127;31128;31129;31130;31131;31132;31133;31134 31133 9 VPTANVSVVDLTCR Unmodified 1529.7872 0.78717704 316 P04406;P04406-2;E7EUT5 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 2 3 2 1 1 3 2 66.53 67.642 2;3 2.1987E-08 17059 Miao_Sh-c_proteinG_mass3_141226_03 130.95 97.209 19399 832.67 593.59 1343.5 1416.1 1327.6 6239.9 1421.6 0 0 898.79 865.1 4460.5 3008 316 2954 28298;28299;28300;28301;28302;28303;28304;28305;28306;28307;28308;28309;28310;28311;28312;28313;28314 31135;31136;31137;31138;31139;31140;31141;31142;31143;31144;31145 31141 11 VPTWGPLR Unmodified 924.51814 0.51813647 553 Q12906;Q12906-4;Q12906-5;Q12906-2;Q12906-6;Q12906-3;Q12906-7;K7EKJ9;K7EQR9 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 2 60.739 62.543 2 0.0053731 15618 Miao_Sh-c_proteinG_mass3_141226_03 101.28 58.201 14567 0 0 0 1994 0 2728.7 0 1252.5 1293.8 3331.5 1416.9 2549.7 3009 553 2955 28315;28316;28317;28318;28319;28320;28321;28322 31146;31147;31148;31149;31150 31147 5 VPYPVFESNPEFLYVEGLPEGIPFR Unmodified 2894.4531 0.45308318 531 P78347;P78347-2;P78347-4;P78347-3 GTF2I General transcription factor II-I yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 113.07 113.37 3 0.047833 28649 Miao_Sh-H9_Flag_mass3_141226_02 25.485 20.015 0 0 0 0 0 0 0 0 0 0 0 0 0 3010 531 2956 28323 31151 31151 1 VPYVAQEIQEEIDELLQEQR Unmodified 2428.2122 0.21218421 166 Q06481;F5H845;F5GZY0;Q06481-5;Q06481-4;Q06481-2;Q06481-3;Q06481-6 APLP2 Amyloid-like protein 2 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 115.97 116.32 3 0.0056466 27769 Miao_Sh-c_Flag_mass3_141226_02 45.885 28.644 0 0 0 0 0 0 0 0 0 0 0 0 0 3011 166 2957 28324 31152 31152 1 VQALEEANNDLENK Unmodified 1585.7584 0.75837933 432 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 3 1 3 3 2 1 1 2 2 3 50.042 52.16 2;3 2.5733E-146 11670 Miao_Sh-c_proteinG_mass3_141226_03 241.98 217.83 353450 0 1695.1 590.91 6730.6 4195.7 94869 0 122.07 178.82 98953 79014 67106 + 3012 432 2958 28325;28326;28327;28328;28329;28330;28331;28332;28333;28334;28335;28336;28337;28338;28339;28340;28341;28342;28343;28344;28345 31153;31154;31155;31156;31157;31158;31159;31160;31161;31162;31163;31164;31165;31166;31167;31168;31169;31170;31171;31172;31173;31174;31175;31176 31161 24 VQIEHISSLIK Unmodified 1265.7343 0.73433683 261 O00231;O00231-2 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 62.859 62.591 3 0.013152 10573 Miao_Sh-H9_Flag_mass3_141226_03 55.353 37.294 5698.8 0 1351.5 0 0 0 0 0 2220.1 2127.2 0 0 0 3013 261 2959 28346;28347;28348 31177;31178 31178 2 VQLSFYWAYAR Unmodified 1402.7034 0.70337105 687 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 4 3 4 4 2 71.194 70.918 2;3 0.0010673 21461 Miao_Sh-H9_proteinG_mass3_141226_01 115.7 73.539 89774 0 0 0 0 0 4934.3 0 0 18348 50237 6013 10241 + 3014 687 2960 28349;28350;28351;28352;28353;28354;28355;28356;28357;28358;28359;28360;28361;28362;28363;28364;28365;28366 31179;31180;31181;31182;31183;31184;31185;31186;31187;31188;31189;31190;31191;31192;31193 31187 15 VQLVVGDGR Unmodified 941.52943 0.52942943 64 P22061;B7Z972;H7BY58;P22061-2 PCMT1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase;Protein-L-isoaspartate O-methyltransferase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 42.376 45.333 2 5.0681E-08 11099 Miao_Sh-H9_proteinG_mass3_141226_01 128.52 65.974 2936.3 0 0 0 0 0 0 0 0 0 0 0 2936.3 3015 64 2961 28367;28368;28369 31194;31195;31196 31194 3 VQQTVQDLFGR Unmodified 1289.6728 0.67279921 441 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 3 4 2 2 3 3 3 7 64.143 65.075 2;3 1.3005E-170 17542 Miao_Sh-H9_proteinG_mass3_141226_03 261.72 168.63 707310 1528.3 4319.1 4967.6 85587 64488 151260 10493 12751 20096 196130 15107 140590 3016 441 2962 28370;28371;28372;28373;28374;28375;28376;28377;28378;28379;28380;28381;28382;28383;28384;28385;28386;28387;28388;28389;28390;28391;28392;28393;28394;28395;28396;28397;28398;28399;28400;28401;28402;28403;28404 31197;31198;31199;31200;31201;31202;31203;31204;31205;31206;31207;31208;31209;31210;31211;31212;31213;31214;31215;31216;31217;31218;31219;31220;31221;31222;31223;31224;31225;31226;31227;31228;31229;31230;31231;31232;31233;31234;31235;31236;31237;31238;31239;31240;31241;31242;31243;31244;31245;31246;31247;31248;31249;31250;31251;31252;31253;31254;31255;31256;31257;31258;31259 31243 63 VQREPLLTLVK Unmodified 1294.7973 0.79727144 559 Q13200;E9PCS3;E7EW34 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 0 0 1 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 62.954 63.205 3 0.056571 9542 Miao_Sh-c_Flag_mass3_141226_02 42.031 28.222 0 0 0 0 0 0 0 0 0 0 0 0 0 3017 559 2963 28405 31260 31260 1 VRELELVYAR Unmodified 1246.7034 0.70337105 573 Q14764 MVP Major vault protein yes yes 0 0 0 0 1 By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 2 2 2 1 4 3 4 77.897 72.123 2;3 1.5254E-09 31482 Miao_Sh-H9_proteinG_mass3_141226_02 143.4 121.62 74427 0 0 0 11327 11719 7761.3 778.91 0 0 14639 11644 16558 3018 573 2964 28406;28407;28408;28409;28410;28411;28412;28413;28414;28415;28416;28417;28418;28419;28420;28421;28422;28423 31261;31262;31263;31264;31265;31266;31267;31268;31269;31270;31271;31272;31273;31274;31275;31276;31277;31278;31279;31280;31281;31282;31283;31284;31285;31286;31287 31284 27 VSALEVLPDR Unmodified 1097.6081 0.60807369 682 Q9Y657 SPIN1 Spindlin-1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 63.29 62.187 2 0.051948 10531 Miao_Sh-H9_Flag_mass3_141226_02 48.568 18.401 0 0 0 0 0 0 0 0 0 0 0 0 0 3019 682 2965 28424 31288 31288 1 VSFELFADK Unmodified 1054.5335 0.53351176 522 P62937;F8WE65;C9J5S7 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 3 1 5 4 2 3 4 6 5 82.501 76.955 2 3.2331E-06 30415 Miao_Sh-H9_proteinG_mass3_141226_01 123.75 48.639 109670 6439.8 5760.8 6765 15553 0 4019 9728 11700 0 17241 14874 17586 3020 522 2966 28425;28426;28427;28428;28429;28430;28431;28432;28433;28434;28435;28436;28437;28438;28439;28440;28441;28442;28443;28444;28445;28446;28447;28448;28449;28450;28451;28452;28453;28454;28455;28456;28457;28458;28459;28460;28461;28462 31289;31290;31291;31292;31293;31294;31295;31296;31297;31298;31299;31300;31301;31302;31303;31304;31305;31306;31307;31308;31309;31310;31311;31312;31313;31314;31315;31316;31317;31318;31319;31320;31321;31322;31323;31324;31325;31326;31327;31328;31329;31330;31331;31332 31318 44 VSGSELVQK Unmodified 945.51311 0.51311067 498 P62195;P62195-2;J3QQM1;J3QLH6;J3KRP2;J3QSA9;J3QRR3 PSMC5 26S protease regulatory subunit 8 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 34.593 35.606 2 0.017955 3323 Miao_Sh-H9_Flag_mass3_141226_02 71.614 10.826 1066.6 230.57 251.43 0 0 0 101.72 0 244 238.87 0 0 0 3021 498 2967 28463;28464;28465;28466;28467 31333;31334 31334 2 VSHLLGINVTDFTR Unmodified 1570.8467 0.84674083 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 4 2 2 3 6 2 2 3 2 7 9 89.152 85.652 2;3 1.364E-34 15555 Miao_Sh-H9_Flag_mass3_141226_01 171.93 133.93 464090 50288 13722 11650 103710 56245 51794 47279 9009.4 2490.9 58410 49144 10357 3022 433 2968 28468;28469;28470;28471;28472;28473;28474;28475;28476;28477;28478;28479;28480;28481;28482;28483;28484;28485;28486;28487;28488;28489;28490;28491;28492;28493;28494;28495;28496;28497;28498;28499;28500;28501;28502;28503;28504;28505;28506;28507;28508;28509;28510;28511;28512 31335;31336;31337;31338;31339;31340;31341;31342;31343;31344;31345;31346;31347;31348;31349;31350;31351;31352;31353;31354;31355;31356;31357;31358;31359;31360;31361;31362;31363;31364;31365;31366;31367;31368;31369;31370;31371;31372;31373;31374;31375;31376;31377;31378;31379;31380;31381;31382;31383;31384;31385;31386;31387;31388;31389;31390;31391;31392;31393;31394;31395;31396;31397;31398;31399;31400;31401;31402;31403;31404;31405;31406;31407;31408;31409;31410;31411;31412;31413;31414;31415;31416;31417;31418;31419;31420;31421;31422;31423;31424;31425;31426;31427;31428;31429;31430;31431;31432;31433;31434 31369 100 VSHQAGDHWLIR Unmodified 1417.7215 0.72148073 573 Q14764 MVP Major vault protein yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 2 3 2 1 1 2 2 43.794 46.073 2;3;4 2.907E-07 4738 Miao_Sh-c_proteinG_mass3_141226_01 137.95 110.64 29947 118.36 0 0 10922 7817.8 2206.8 362.97 148.61 0 2988.8 5381 0 3023 573 2969 28513;28514;28515;28516;28517;28518;28519;28520;28521;28522;28523;28524;28525;28526 31435;31436;31437;31438;31439;31440;31441;31442;31443 31435 9 VSHVSTGGGASLELLEGK Unmodified 1739.9054 0.90537792 63 P00558;B7Z7A9;E7ERH5;P07205 PGK1;PGK2 Phosphoglycerate kinase 1;Phosphoglycerate kinase 2 yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 2 1 1 1 1 2 1 65.913 65.723 3 1.4404E-14 9958 Miao_Sh-H9_Flag_mass3_141226_01 106.93 83.048 29391 2105.8 542.73 0 0 1712.3 11448 0 3346.6 835.08 361.82 9039 0 3024 63 2970 28527;28528;28529;28530;28531;28532;28533;28534;28535;28536;28537;28538;28539 31444;31445;31446;31447;31448;31449;31450;31451;31452 31449 9 VSIVTPEDILR Unmodified 1240.7027 0.70270235 6 P54578;A6NJA2;B7Z4N8;P54578-2 USP14 Ubiquitin carboxyl-terminal hydrolase 14;Ubiquitin carboxyl-terminal hydrolase yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 2 1 2 3 2 3 1 1 1 74.371 71.933 2 0.00011734 17117 Miao_Sh-H9_Flag_mass3_141226_02 122.7 83.395 13776 128.03 0 2580.2 0 1317.1 2015.7 4721.9 0 0 599.63 2413 0 3025 6 2971 28540;28541;28542;28543;28544;28545;28546;28547;28548;28549;28550;28551;28552;28553;28554;28555;28556 31453;31454;31455;31456;31457;31458;31459;31460;31461;31462;31463;31464 31462 12 VSLAGACGVGGYGSR Unmodified 1409.6721 0.67214728 105 P13647;CON__P13647;F8VV57 KRT5 Keratin, type II cytoskeletal 5 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 2 2 49.548 52.886 2 6.9564E-62 13840 Miao_Sh-H9_proteinG_mass3_141226_01 191.98 168.03 18255 0 0 0 0 124.94 4775.6 0 0 0 6932 0 6422.5 + 3026 105 2972 28557;28558;28559;28560;28561;28562;28563 31465;31466;31467;31468;31469;31470;31471 31466 7 VSLDVNHFAPDELTVK Unmodified 1782.9152 0.91521432 317 P04792;F8WE04 HSPB1 Heat shock protein beta-1 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 2 2 1 1 2 1 86.418 83.661 3 3.0846E-05 29779 Miao_Sh-H9_proteinG_mass3_141226_01 92.633 65.175 28374 3391.5 2167.6 1229.1 3445.6 0 0 2754.1 3986 3837.7 5103.4 2458.8 0 3027 317 2973 28564;28565;28566;28567;28568;28569;28570;28571;28572;28573;28574;28575 31472;31473;31474;31475;31476;31477;31478 31476 7 VSLLEIYNEELFDLLNPSSDVSER Unmodified 2780.3756 0.37562072 473 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 2 2 1 1 1 1 118.97 121.07 3 2.0154E-65 31135 Miao_Sh-H9_Flag_mass3_141226_02 155.71 144.83 11464 0 0 0 0 2653.1 0 8811 0 0 0 0 0 3028 473 2974 28576;28577;28578;28579;28580;28581;28582;28583 31479;31480;31481;31482;31483;31484;31485 31485 7 VSQWWER Unmodified 989.47191 0.47191456 661 Q9P035;H3BPZ1;H3BS72 PTPLAD1 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 59.428 59.896 2 0.030697 9539 Miao_Sh-H9_Flag_mass3_141226_01 74.255 38.637 3801 0 0 439.54 0 0 0 1884.5 0 1476.9 0 0 0 3029 661 2975 28584;28585;28586 31486 31486 0 VSTDLLR Unmodified 802.45487 0.45486751 633 Q96HS1;Q96HS1-2;F5GXG4 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 42.132 45.541 2 0.032962 9821 Miao_Sh-c_proteinG_mass3_141226_03 71.296 26.529 2312.4 0 409.19 0 0 0 1903.2 0 0 0 0 0 0 3030 633 2976 28587;28588 31487 31487 0 VSVELTNSLFK Unmodified 1235.6762 0.67615325 373 P14923 JUP Junction plakoglobin yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 70.441 66.18 2 0.0091244 20374 Miao_Sh-c_proteinG_mass3_141226_03 67.385 41.267 0 0 0 0 0 0 0 0 0 0 0 0 0 3031 373 2977 28589 31488 31488 1 VTAEVVLAHLGGGSTSR Unmodified 1652.8846 0.8845829 318 P04843;F8WF32 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 69.365 68.903 3 0.020873 11093 Miao_Sh-c_Flag_mass3_141226_01 38.227 21.026 5284.9 1095.5 0 810.37 0 0 1214.8 1353.9 0 0 0 810.37 0 3032 318 2978 28590;28591;28592;28593;28594 31489 31489 1 VTAGISFAIPSDR Unmodified 1332.7038 0.70376498 282 O43464;O43464-2;O43464-3;P83110;P83110-2 HTRA2;HTRA3 Serine protease HTRA2, mitochondrial;Serine protease HTRA3 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 66.942 67.473 2 0.00043349 12057 Miao_Sh-c_Flag_mass3_141226_03 84.173 49.4 7051.4 847.99 887.65 2250.3 1697.8 0 0 1367.6 0 0 0 0 0 3033 282 2979 28595;28596;28597;28598;28599 31490 31490 1 VTAIHIDPATHR Unmodified 1329.7153 0.71533272 464 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 43.343 44.53 3 0.025078 3839 Miao_Sh-c_Flag_mass3_141226_03 45.28 28.507 1263.6 0 0 365.3 94.901 0 0 280.8 0 0 0 522.6 0 3034 464 2980 28600;28601;28602;28603 31491 31491 1 VTDLVQFLLFK Unmodified 1321.7646 0.76457433 452 P43363;C9J9A2;C9J958 MAGEA10 Melanoma-associated antigen 10 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 2 1 101.65 100.7 2 0.0029537 27624 Miao_Sh-H9_Flag_mass3_141226_02 82.489 63.817 2215.9 0 0 0 982.02 209.31 0 0 707.5 0 0 317.03 0 3035 452 2981 28604;28605;28606;28607;28608 31492;31493 31493 2 VTEGLTDVILYHQPDDK Unmodified 1941.9684 0.96837211 286 O60506-4;O60506-3;O60506;O60506-2;O60506-5 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 1 66.755 69.111 3 6.8806E-09 20226 Miao_Sh-H9_proteinG_mass3_141226_02 115.73 93.19 25998 618.65 647.89 0 680.2 5877.3 7073 0 0 0 0 4660.4 6440.4 3036 286 2982 28609;28610;28611;28612;28613;28614;28615;28616 31494;31495;31496;31497 31496 4 VTGEADVEFATHEEAVAAMSK Unmodified 2191.0103 0.010313275 472 P52597 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 66.423 66.36 3 0.00011152 12840 Miao_Sh-H9_Flag_mass3_141226_01 59.975 46.551 41243 8964.6 10520 0 0 0 0 3208.5 0 18550 0 0 0 3037 472 2983 28617;28618;28619;28620 31498 31498 1 VTHAVVTVPAYFNDAQR Unmodified 1886.9639 0.96389585 355 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 3 3 2 1 5 3 4 5 3 9 2 72.177 70.494 2;3;4 2.7066E-35 11231 Miao_Sh-H9_Flag_mass3_141226_01 162.7 147.06 197090 13431 15435 16168 8143.4 8910.7 5527 23312 31861 30037 11582 20883 11800 3038 355 2984 28621;28622;28623;28624;28625;28626;28627;28628;28629;28630;28631;28632;28633;28634;28635;28636;28637;28638;28639;28640;28641;28642;28643;28644;28645;28646;28647;28648;28649;28650;28651;28652;28653;28654;28655;28656;28657;28658;28659;28660;28661;28662 31499;31500;31501;31502;31503;31504;31505;31506;31507;31508;31509;31510;31511;31512;31513;31514;31515;31516;31517;31518;31519;31520;31521;31522;31523;31524;31525;31526;31527;31528;31529;31530;31531;31532;31533;31534;31535;31536;31537;31538;31539;31540;31541;31542;31543;31544;31545;31546 31520 48 VTIAQGGVLPNIQAVLLPK Unmodified 1930.1615 0.16153303 320 Q6FI13;P0C0S8;Q9BTM1;Q16777;Q99878;Q93077;Q7L7L0;P04908;Q96KK5;P20671;H0YFX9 HIST2H2AA3;HIST1H2AG;H2AFJ;HIST2H2AC;HIST1H2AJ;HIST1H2AC;HIST3H2A;HIST1H2AB;HIST1H2AH;HIST1H2AD Histone H2A type 2-A;Histone H2A type 1;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-J;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A type 1-H;Histone H2A type 1-D;Histone H2A yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 12 1 2 3 13 9 4 6 23 107.85 101.6 2;3 1.5612E-63 23883 Miao_Sh-c_proteinG_mass3_141226_02 183.6 166.6 395920 25084 0 0 0 67397 52299 17085 39384 0 0 129000 65662 3039 320 2985 28663;28664;28665;28666;28667;28668;28669;28670;28671;28672;28673;28674;28675;28676;28677;28678;28679;28680;28681;28682;28683;28684;28685;28686;28687;28688;28689;28690;28691;28692;28693;28694;28695;28696;28697;28698;28699;28700;28701;28702;28703;28704;28705;28706;28707;28708;28709;28710;28711;28712;28713;28714;28715;28716;28717;28718;28719;28720;28721;28722;28723;28724;28725;28726;28727;28728;28729;28730;28731;28732;28733;28734;28735;28736;28737;28738 31547;31548;31549;31550;31551;31552;31553;31554;31555;31556;31557;31558;31559;31560;31561;31562;31563;31564;31565;31566;31567;31568;31569;31570;31571;31572;31573;31574;31575;31576;31577;31578;31579;31580;31581;31582;31583;31584;31585;31586;31587;31588;31589;31590;31591;31592;31593;31594;31595;31596;31597;31598;31599;31600;31601;31602;31603;31604;31605;31606;31607;31608;31609;31610;31611;31612;31613;31614;31615;31616;31617;31618;31619;31620;31621;31622;31623;31624;31625;31626;31627;31628;31629;31630;31631;31632;31633;31634;31635;31636;31637;31638;31639;31640;31641;31642;31643;31644;31645;31646;31647;31648;31649;31650;31651;31652;31653;31654;31655;31656;31657;31658 31565 111 VTLATLK Unmodified 744.47454 0.47454032 334 P06748;P06748-2;P06748-3;E5RI98 NPM1 Nucleophosmin yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1 1 1 1 46.114 47.677 2 0.0076749 10730 Miao_Sh-H9_proteinG_mass3_141226_03 108.92 27.604 186960 3314.1 3628.4 3392.3 2959.1 2469.5 39032 3351.8 3661.4 4847.9 48281 41532 30489 3040 334 2986 28739;28740;28741;28742;28743;28744;28745;28746;28747;28748;28749;28750 31659;31660;31661;31662;31663;31664;31665;31666;31667;31668;31669;31670;31671;31672;31673 31672 15 VTLDWAK Unmodified 831.44905 0.44905385 389 P19338;H7BY16 NCL Nucleolin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 1 1 1 1 56.781 58.693 2 0.034445 14020 Miao_Sh-c_proteinG_mass3_141226_03 79.451 31.535 14033 639.76 0 0 702.16 669.64 4648.1 0 1510.8 1910.8 0 0 3952.1 3041 389 2987 28751;28752;28753;28754;28755;28756;28757 31674 31674 1 VTLENFYSNLIAQHEER Unmodified 2062.012 0.011968255 577 Q15208 STK38 Serine/threonine-protein kinase 38 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 2 2 1 1 1 3 1 1 91.369 88.577 3 1.5712E-35 17755 Miao_Sh-c_Flag_mass3_141226_01 165.66 123.41 45812 5600.6 4353.7 4783.6 2336.4 0 0 10266 8527.5 7662.3 1368.5 0 913.74 3042 577 2988 28758;28759;28760;28761;28762;28763;28764;28765;28766;28767;28768;28769;28770 31675;31676;31677;31678;31679;31680;31681;31682;31683;31684 31675 10 VTLTSEEEAR Unmodified 1133.5564 0.55643205 309 P00338;P00338-3;P00338-4 LDHA L-lactate dehydrogenase A chain yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 2 1 2 1 2 2 1 1 1 1 38.341 39.257 2 0.00081334 8771 Miao_Sh-H9_proteinG_mass3_141226_01 119.22 77.775 5724.7 1793.1 0 0 262.46 58.156 0 139.31 99.031 307.4 1591.4 870.26 603.62 3043 309 2989 28771;28772;28773;28774;28775;28776;28777;28778;28779;28780;28781;28782;28783;28784 31685;31686;31687;31688;31689;31690 31690 6 VTMQNLNDR Unmodified 1089.5237 0.52369213 104;97;102 P13645;CON__P13645;CON__P02535-1;Q7Z3Y7;CON__Q148H6;CON__Q7Z3Y7;Q7Z3Z0;Q7Z3Y8;CON__Q7Z3Z0;CON__Q7Z3Y8;Q7Z3Y9;CON__Q7Z3Y9;P02533;CON__P02533;CON__A2A4G1;CON__Q9Z2K1;CON__Q3ZAW8;P08779;CON__P08779 KRT10;KRT28;KRT25;KRT27;KRT26;KRT14;KRT16 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28;Keratin, type I cytoskeletal 25;Keratin, type I cytoskeletal 27;Keratin, type I cytoskeletal 26;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 36.313 39.672 2 0.039555 3823 Miao_Sh-c_proteinG_mass3_141226_02 61.78 29.459 1953.4 0 0 0 0 348.95 950.53 0 0 0 377.18 0 276.75 + 3044 104;97;102 2990 28785;28786;28787;28788 31691 31691 1 VTPQSLFILFGVYGDVQR Unmodified 2038.0888 0.088762013 415 P26599;P26599-2;P26599-3;A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 2 110.99 111.87 3 2.5543E-06 26216 Miao_Sh-c_Flag_mass3_141226_01 72.21 56.823 6996.4 2000.9 0 3288.2 1707.3 0 0 0 0 0 0 0 0 3045 415 2991 28789;28790;28791;28792;28793;28794 31692;31693;31694;31695;31696 31692 5 VTVDTGVIPASEEK Unmodified 1443.7457 0.74568938 289 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 50.536 53.494 2 0.0024209 12752 Miao_Sh-H9_proteinG_mass3_141226_03 68.283 44.815 2248.8 0 0 0 0 0 0 0 0 0 0 0 2248.8 3046 289 2992 28795 31697 31697 1 VTYHPDGPEGQAYDVDFTPPFR Unmodified 2507.1394 0.13935361 575 Q15046;Q15046-2 KARS Lysine--tRNA ligase yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 76.146 77.6 3 0.0023301 15800 Miao_Sh-c_proteinG_mass3_141226_01 42.863 35.949 1831.6 0 0 0 1831.6 0 0 0 0 0 0 0 0 3047 575 2993 28796 31698 31698 1 VVAGDEWLFEGPGTYIPR Unmodified 2004.9945 0.99452728 573 Q14764;H3BQK6 MVP Major vault protein yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 3 2 1 1 1 3 1 1 101.48 97.494 2;3;4 3.793E-23 22835 Miao_Sh-c_proteinG_mass3_141226_01 148.41 129.83 97929 0 0 0 51724 27425 0 0 4052.8 2218.3 6208.5 4627.9 1672.3 3048 573 2994 28797;28798;28799;28800;28801;28802;28803;28804;28805;28806;28807;28808;28809 31699;31700;31701;31702;31703;31704;31705;31706;31707;31708;31709;31710;31711;31712;31713;31714;31715;31716;31717;31718;31719 31699 21 VVDALGNAIDGK Unmodified 1170.6245 0.62445203 410 P25705;P25705-2;K7EK77;K7ERX7;K7EJP1;K7ENJ4;K7EQH4 ATP5A1 ATP synthase subunit alpha, mitochondrial yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 1 52.609 54.964 2 0.00012915 12915 Miao_Sh-c_proteinG_mass3_141226_03 125.53 82.219 25199 0 0 0 0 0 4794.7 2762.4 0 0 17024 0 617.77 3049 410 2995 28810;28811;28812;28813 31720;31721;31722;31723;31724 31721 5 VVDLLAPYAK Unmodified 1087.6277 0.6277465 331 P06576;H0YH81;F8VPV9;F8W079 ATP5B ATP synthase subunit beta, mitochondrial;ATP synthase subunit beta yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 2 1 1 2 1 72.068 71.876 2 0.0062337 19731 Miao_Sh-H9_proteinG_mass3_141226_03 82.029 43.237 17400 674.95 505.63 2527 1068.5 0 0 2261.7 2438.2 0 3348.5 1832.1 2744 3050 331 2996 28814;28815;28816;28817;28818;28819;28820;28821;28822;28823;28824 31725;31726 31726 2 VVDPFSK Unmodified 790.4225 0.42250475 492 P61247;F5H4F9;H0Y8L7;E9PFI5;D6RI02;H0Y9Y4 RPS3A 40S ribosomal protein S3a yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 2 2 49.252 50.315 2 0.0095253 10755 Miao_Sh-c_proteinG_mass3_141226_03 101.64 48.96 21675 0 0 74.764 101.11 0 8595 91.257 1643.1 1075.1 10094 0 0 3051 492 2997 28825;28826;28827;28828;28829;28830;28831;28832;28833 31727;31728;31729 31727 3 VVEVLAGHGHLYSR Unmodified 1535.8209 0.82086043 464 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 49.16 48.909 4 0.038439 6461 Miao_Sh-H9_Flag_mass3_141226_03 35.657 25.012 1061 0 0 0 0 0 0 538.8 0 522.21 0 0 0 3052 464 2998 28834;28835 31730 31730 1 VVFGPELVSLGPEEQFTVLSLSAGR Unmodified 2630.3956 0.3955683 573 Q14764 MVP Major vault protein yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching 2 2 110.38 112.03 3;4 3.0429E-12 28755 Miao_Sh-c_proteinG_mass3_141226_01 76.351 66.205 1753.8 0 0 0 1753.8 0 0 0 0 0 0 0 0 3053 573 2999 28836;28837;28838;28839 31731;31732;31733;31734 31731 3 VVFGPELVSLGPEEQFTVLSLSAGRPK Unmodified 2855.5433 0.54329517 573 Q14764 MVP Major vault protein yes yes 0 0 0 0 1 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 3 1 1 2 7 117.18 108.5 3;4 7.703E-110 38998 Miao_Sh-H9_proteinG_mass3_141226_01 196.2 180.44 278000 0 0 0 0 39788 31174 0 0 0 122290 84741 0 3054 573 3000 28840;28841;28842;28843;28844;28845;28846;28847;28848;28849;28850;28851;28852;28853 31735;31736;31737;31738;31739;31740;31741;31742;31743;31744;31745;31746;31747;31748;31749;31750;31751;31752;31753;31754;31755;31756;31757;31758;31759;31760 31745 26 VVFQEFR Unmodified 923.4865 0.48650199 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 3 3 1 1 3 3 2 65.439 62.688 2 3.5006E-34 14307 Miao_Sh-c_proteinG_mass3_141226_03 192.31 144.57 271190 8040.1 7675.8 6245.6 16520 16936 39217 0 15792 12548 56964 45184 46071 3055 433 3001 28854;28855;28856;28857;28858;28859;28860;28861;28862;28863;28864;28865;28866;28867;28868;28869;28870;28871;28872;28873;28874 31761;31762;31763;31764;31765;31766;31767;31768;31769;31770;31771;31772;31773;31774;31775;31776;31777;31778;31779;31780;31781;31782;31783;31784;31785;31786;31787;31788;31789;31790;31791;31792;31793;31794;31795;31796;31797;31798;31799;31800;31801;31802;31803;31804;31805;31806;31807;31808;31809;31810;31811;31812;31813;31814;31815;31816;31817;31818;31819 31773 59 VVFRDPYR Unmodified 1050.5611 0.56106391 521 P62917;E9PKZ0;G3V1A1;E9PKU4 RPL8 60S ribosomal protein L8 yes no 0 0 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1 1 2 2 64.242 59.906 3 0.0036634 29065 Miao_Sh-H9_proteinG_mass3_141226_02 111.01 81.201 27905 816.33 1050.6 1075.4 1246.3 1394.2 3442.8 1208.1 2405.7 2565 4864.5 4812.5 3023.8 3056 521 3002 28875;28876;28877;28878;28879;28880;28881;28882;28883;28884;28885;28886;28887;28888 31820;31821;31822;31823;31824;31825;31826;31827;31828;31829;31830;31831;31832;31833;31834;31835;31836;31837;31838;31839;31840;31841;31842;31843;31844;31845;31846;31847;31848;31849;31850;31851;31852;31853;31854 31846 35 VVGAVIDQGLITR Unmodified 1339.7823 0.78234966 147 E9PLD3;E9PRG8 LOC102288414 yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 1 4 1 2 65.205 66.728 2;3 1.3649E-08 17962 Miao_Sh-H9_proteinG_mass3_141226_03 125.53 86.521 18275 0 0 2979.6 6065.5 4686.5 0 4543.7 0 0 0 0 0 3057 147 3003 28889;28890;28891;28892;28893;28894;28895;28896;28897;28898;28899;28900;28901;28902 31855;31856;31857;31858;31859;31860;31861;31862;31863;31864;31865;31866 31865 12 VVGSEFVQK Unmodified 991.53385 0.53384611 453 P43686;P43686-2 PSMC4 26S protease regulatory subunit 6B yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 42.84 45.363 2 0.012617 4809 Miao_Sh-c_Flag_mass3_141226_01 76.1 35.376 2058 668.79 0 732.18 0 0 657.03 0 0 0 0 0 0 3058 453 3004 28903;28904;28905 31867 31867 1 VVGSELIQK Unmodified 971.56515 0.56514624 39 P62191;B4DR63 PSMC1 26S protease regulatory subunit 4 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 47.486 47.336 2 0.029027 5852 Miao_Sh-H9_Flag_mass3_141226_03 66.299 15.022 1707.1 0 0 0 0 0 0 0 0 1707.1 0 0 0 3059 39 3005 28906 31868 31868 1 VVGVLLGSWQK Unmodified 1184.6917 0.69174374 218 P51665;H3BNT7;H3BTM8 PSMD7 26S proteasome non-ATPase regulatory subunit 7 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 1 72.509 73.397 2 0.0057992 15035 Miao_Sh-H9_Flag_mass3_141226_03 80.737 48.267 8568.6 1214.8 1445 1539.1 0 0 194.5 745.77 1205.2 2224.2 0 0 0 3060 218 3006 28907;28908;28909;28910;28911;28912;28913 31869;31870;31871 31871 3 VVHAVEVALATFNAESNGSYLQLVEISR Unmodified 3015.5665 0.56654981 103 CON__P12763 yes yes 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 109.13 109.02 3 0.00020044 24732 Miao_Sh-c_Flag_mass3_141226_02 43.732 40.112 0 0 0 0 0 0 0 0 0 0 0 0 0 + 3061 103 3007 28914;28915;28916 31872;31873;31874 31872 3 VVIEFNK Unmodified 847.48035 0.48035398 370 P14649;F8W1I5 MYL6B Myosin light chain 6B yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 1 1 1 1 2 49.693 52.16 2 0.0004053 12562 Miao_Sh-H9_proteinG_mass3_141226_02 143.02 84.773 42374 310.04 0 1128 0 734.95 9062.1 0 0 0 11191 9870.5 10078 3062 370 3008 28917;28918;28919;28920;28921;28922;28923;28924;28925 31875;31876;31877;31878;31879;31880;31881;31882;31883 31881 9 VVIGMDVAASEFFR Unmodified 1539.7755 0.77554972 333 P06733;P06733-2 ENO1 Alpha-enolase yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching 2 2 1 1 2 1 1 102.92 99.212 2;3 0.00012328 37129 Miao_Sh-H9_proteinG_mass3_141226_01 97.273 76.213 10426 1313.3 0 0 3312.8 0 1589.8 541.01 0 1318 1642.3 708.74 0 3063 333 3009 28926;28927;28928;28929;28930;28931;28932;28933;28934;28935 31884;31885;31886;31887;31888 31888 5 VVISLQLTAEK Unmodified 1199.7125 0.71253876 423 P30041 PRDX6 Peroxiredoxin-6 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 1 54.828 57.156 2 0.032348 14342 Miao_Sh-H9_proteinG_mass3_141226_03 56.548 15.82 47397 1868.6 0 0 0 158.7 7238.7 0 0 1977.1 16326 12697 7130.4 3064 423 3010 28936;28937;28938;28939;28940;28941;28942 31889 31889 1 VVLAYEPVWAIGTGK Unmodified 1601.8817 0.88172935 487 P60174;P60174-4;P60174-1;U3KQF3;U3KPZ0 TPI1 Triosephosphate isomerase yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 2 1 87.902 88.954 2 0.0041906 19701 Miao_Sh-c_proteinG_mass3_141226_01 57.288 30.502 0 0 0 0 0 0 0 0 0 0 0 0 0 3065 487 3011 28943;28944;28945;28946 31890;31891;31892;31893 31891 4 VVLIGGKPDR Unmodified 1052.6342 0.63422886 494 P61978;P61978-2;Q5T6W5;P61978-3;Q5T6W2;Q5T6W1 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 2 1 1 2 1 1 1 1 1 37.766 39.114 3 0.0021949 8294 Miao_Sh-H9_proteinG_mass3_141226_02 98.04 73.854 10993 509.99 501.94 28.897 258.01 0 3443.2 0 623.34 730.67 0 2517.1 2379.9 3066 494 3012 28947;28948;28949;28950;28951;28952;28953;28954;28955;28956;28957;28958;28959 31894;31895;31896;31897;31898;31899;31900;31901;31902;31903;31904 31903 11 VVLVLAGR Unmodified 825.54362 0.54362294 493 P61353;K7ERY7 RPL27 60S ribosomal protein L27 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 3 2 1 1 1 1 3 2 61.217 59.395 2 5.337E-74 7735 Miao_Sh-c_proteinG_mass3_141226_02 198.39 133.13 161300 6817.1 5076.2 5521.5 7572.7 0 22750 10382 11816 12063 29953 24762 24587 3067 493 3013 28960;28961;28962;28963;28964;28965;28966;28967;28968;28969;28970;28971;28972;28973;28974;28975;28976;28977 31905;31906;31907;31908;31909;31910;31911;31912;31913;31914;31915;31916;31917;31918;31919;31920;31921;31922;31923;31924;31925;31926;31927;31928;31929;31930;31931;31932;31933;31934;31935;31936;31937;31938;31939;31940;31941;31942;31943;31944 31913 40 VVNPLFEK Unmodified 944.53312 0.53311783 509 P62424;Q5T8U3 RPL7A 60S ribosomal protein L7a yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 2 1 55.59 57.003 2 0.0042996 14228 Miao_Sh-H9_proteinG_mass3_141226_03 107.57 51.898 75214 2566.1 2784.9 305.72 274.98 0 15373 0 6935 6078.4 16686 12870 11339 3068 509 3014 28978;28979;28980;28981;28982;28983;28984;28985;28986;28987;28988 31945;31946;31947;31948;31949;31950;31951;31952;31953;31954;31955;31956;31957;31958;31959;31960 31959 16 VVPLYGR Unmodified 802.47012 0.47012364 123 Q99942;E7EM95 RNF5 E3 ubiquitin-protein ligase RNF5 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 42.951 44.956 2 0.024906 4692 Miao_Sh-c_Flag_mass3_141226_02 88.734 43.653 2887.2 534.35 556.33 70.366 0 0 1726.2 0 0 0 0 0 0 3069 123 3015 28989;28990;28991;28992 31961 31961 1 VVSEDFLQDVSASTK Unmodified 1623.7992 0.79918151 349 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 86.238 78.603 2 0.0090917 28084 Miao_Sh-H9_proteinG_mass3_141226_02 55.097 41.352 6546.7 0 0 1283.1 0 527.11 47.162 0 0 0 1745 2195.2 749.04 3070 349 3016 28993;28994;28995;28996;28997;28998 31962;31963 31963 2 VVSSVLQFGNISFK Unmodified 1523.8348 0.83477916 434 P35580;P35580-3;P35580-2;F8W6L6;P35580-4 MYH10 Myosin-10 yes no 0 0 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 4 3 1 9 2 3 1 9 3 6 96.943 93.011 2;3 1.7189E-20 33624 Miao_Sh-c_proteinG_mass3_141226_03 152.17 122.36 51472 0 2840.5 2813.4 17074 4682.5 749.08 1947.6 4737.8 0 0 10202 6424.2 3071 434 3017 28999;29000;29001;29002;29003;29004;29005;29006;29007;29008;29009;29010;29011;29012;29013;29014;29015;29016;29017;29018;29019;29020;29021;29022;29023;29024;29025;29026;29027;29028;29029;29030;29031;29032;29033;29034;29035;29036;29037;29038;29039;29040 31964;31965;31966;31967;31968;31969;31970;31971;31972;31973;31974;31975;31976;31977;31978;31979;31980;31981;31982;31983;31984;31985;31986;31987;31988;31989;31990;31991;31992;31993;31994;31995;31996;31997;31998;31999;32000;32001;32002;32003;32004;32005;32006;32007;32008;32009 31975 46 VVTDTDETELAR Unmodified 1347.6518 0.65178899 323 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 2 1 1 1 1 43.645 45.589 2 0.001007 9094 Miao_Sh-c_proteinG_mass3_141226_03 83.137 61.11 3385.6 232.7 237.9 0 75.4 82.7 264.26 271.04 0 309.4 0 1160.8 751.4 3072 323 3018 29041;29042;29043;29044;29045;29046;29047;29048;29049;29050 32010;32011;32012 32011 3 VVVGIVLWNIFNR Unmodified 1527.8926 0.89256881 307 O95831;O95831-3;E9PMA0;O95831-5;O95831-2 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 113.73 113.73 2 7.5383E-05 26498 Miao_Sh-c_Flag_mass3_141226_01 93.345 82.086 0 0 0 0 0 0 0 0 0 0 0 0 0 3073 307 3019 29051 32013 32013 1 VVYIFGPPVK Unmodified 1117.6536 0.65356732 467 P49915;P49915-2 GMPS GMP synthase [glutamine-hydrolyzing] yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 72.368 73.095 2 0.050582 12755 Miao_Sh-c_Flag_mass3_141226_03 54.982 23.56 3358.4 0 0 1088.3 0 0 0 0 0 0 2270.1 0 0 3074 467 3020 29052;29053 32014 32014 1 VWGLELILFNSPEYQR Unmodified 1963.0203 0.020348097 83 P54252;P54252-2;S4R399;G3V328;G3V3R7;C9JQV6;F5H211;P54252-3;P54252-4;G3V3T0;G3V390;G3V4F5;G3V4F4;G3V5H3 ATXN3 Ataxin-3 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 111.72 111.69 3 1.6795E-05 25706 Miao_Sh-c_Flag_mass3_141226_01 100.4 77 7143.7 2543.5 2381 0 0 0 0 2219.1 0 0 0 0 0 3075 83 3021 29054;29055;29056 32015;32016 32015 2 VWLDPNETNEIANANSR Unmodified 1941.9181 0.91806787 233 P84098;J3QR09;J3KTE4;J3QL15 RPL19 60S ribosomal protein L19;Ribosomal protein L19 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 2 1 4 3 66.996 67.888 2;3 2.37E-23 18375 Miao_Sh-H9_proteinG_mass3_141226_03 141.6 120.87 18837 0 623.26 1702 3718.1 0 0 0 6883.6 0 0 0 5910.1 3076 233 3022 29057;29058;29059;29060;29061;29062;29063;29064;29065;29066;29067;29068;29069;29070;29071;29072;29073 32017;32018;32019;32020;32021;32022;32023;32024;32025;32026;32027;32028;32029;32030;32031;32032;32033 32033 17 VYEGERPLTK Unmodified 1190.6295 0.62953741 355 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 0 1 By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 1 3 2 2 2 2 33.907 34.909 2;3 1.2567E-10 7022 Miao_Sh-H9_proteinG_mass3_141226_01 150.21 86.532 43313 4125.6 60.48 357.67 0 0 8985.7 4202.8 3828.6 111.84 9171.2 7295.1 5174.3 3077 355 3023 29074;29075;29076;29077;29078;29079;29080;29081;29082;29083;29084;29085;29086;29087;29088;29089;29090;29091 32034;32035;32036;32037;32038;32039;32040;32041;32042;32043;32044;32045;32046 32042 12 VYENYPTYDLTER Unmodified 1661.7573 0.7573167 436 P35659;B4DFG0;P35659-2;H0Y993 DEK Protein DEK yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 1 2 2 1 62.655 64.142 2;3 3.4518E-05 16669 Miao_Sh-H9_proteinG_mass3_141226_03 111.12 97.032 14134 1052.8 1722.3 0 345.42 0 561.78 0 0 1914.2 4516.7 2491.5 1529.4 3078 436 3024 29092;29093;29094;29095;29096;29097;29098;29099;29100;29101;29102;29103;29104 32047;32048;32049;32050;32051;32052;32053;32054;32055;32056;32057;32058 32057 12 VYNVTQHAVGIVVNK Unmodified 1639.9046 0.90459006 458 P46778;G3V1B3;M0R181 RPL21 60S ribosomal protein L21 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 3 5 12 3 2 8 2 3 3 4 3 59.843 59.828 2;3 2.861E-49 15571 Miao_Sh-H9_proteinG_mass3_141226_01 184 153.51 381650 15694 11246 11410 36223 27992 39464 0 27610 22440 68503 64990 56080 3079 458 3025 29105;29106;29107;29108;29109;29110;29111;29112;29113;29114;29115;29116;29117;29118;29119;29120;29121;29122;29123;29124;29125;29126;29127;29128;29129;29130;29131;29132;29133;29134;29135;29136;29137;29138;29139;29140;29141;29142;29143;29144;29145;29146;29147;29148;29149;29150;29151;29152;29153;29154 32059;32060;32061;32062;32063;32064;32065;32066;32067;32068;32069;32070;32071;32072;32073;32074;32075;32076;32077;32078;32079;32080;32081;32082;32083;32084;32085;32086;32087;32088;32089;32090;32091;32092;32093;32094;32095;32096;32097;32098;32099;32100;32101;32102;32103;32104;32105;32106;32107;32108;32109;32110;32111;32112;32113;32114;32115;32116;32117;32118;32119;32120;32121;32122;32123;32124;32125;32126;32127;32128;32129;32130;32131;32132;32133;32134;32135;32136;32137;32138;32139;32140;32141;32142;32143 32123 85 VYPLSSCCGDK Unmodified 1284.5479 0.54785797 93 CON__ENSEMBL:ENSBTAP00000024466 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 2 1 2 4 4 42.162 45.358 2 0.0012083 8997 Miao_Sh-c_proteinG_mass3_141226_03 105.2 94.452 23576 0 0 0 0 0 8060.3 0 0 0 7263.2 556.69 7695.5 + 3080 93 3026 29155;29156;29157;29158;29159;29160;29161;29162;29163;29164;29165;29166;29167 32144;32145;32146;32147;32148;32149;32150;32151;32152;32153;32154;32155;32156;32157;32158;32159;32160;32161;32162 32146 19 VYVGNLGNNGNK Unmodified 1247.6258 0.62584901 53 P84103;B4E241 SRSF3 Serine/arginine-rich splicing factor 3 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 40.233 41.386 2 0.004097 9085 Miao_Sh-H9_proteinG_mass3_141226_02 77.288 44.025 4817.6 30.482 0 0 264.08 0 0 0 0 0 2459.1 2063.9 0 3081 53 3027 29168;29169;29170;29171 32163;32164 32164 2 VYVGNLGTGAGK Unmodified 1134.6033 0.60332266 77 Q16629;C9JAB2;Q16629-3;Q16629-2;Q16629-4 SRSF7 Serine/arginine-rich splicing factor 7 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 44.7 46.655 2 0.0066029 10664 Miao_Sh-H9_proteinG_mass3_141226_02 65.295 37.121 3912.9 0 0 0 0 0 0 0 0 0 2891.9 0 1021 3082 77 3028 29172;29173;29174;29175 32165;32166;32167 32167 3 WDVLIQQATQCLNR Unmodified 1743.8726 0.872638 643 Q9BUJ2;Q9BUJ2-2;B7Z4B8;Q9BUJ2-4;M0R3F1;Q9BUJ2-3 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 86.574 85.897 2;3 4.9725E-09 17511 Miao_Sh-c_proteinG_mass3_141226_02 134.68 86.87 6402.5 0 671.54 1044.9 0 3985.5 0 0 0 0 0 700.48 0 3083 643 3029 29176;29177;29178;29179;29180 32168;32169;32170 32170 3 WELLQQVDTSTR Unmodified 1474.7416 0.74160705 314 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 1 1 2 2 3 1 1 1 2 3 2 71.307 69.001 2;3 7.2232E-117 20218 Miao_Sh-c_proteinG_mass3_141226_03 233.7 154.8 117490 639.37 7194.3 728.71 31780 25949 16702 1210.1 629.2 2027.5 30029 0 605.04 + 3084 314 3030 29181;29182;29183;29184;29185;29186;29187;29188;29189;29190;29191;29192;29193;29194;29195;29196;29197;29198;29199 32171;32172;32173;32174;32175;32176;32177;32178;32179;32180;32181;32182;32183;32184;32185;32186;32187 32180 17 WFLTCINQPQFR Unmodified 1608.7871 0.78711746 417 P26641;B4DTG2 EEF1G Elongation factor 1-gamma yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 89.934 89.834 2 0.049805 19983 Miao_Sh-H9_Flag_mass3_141226_02 43.897 22.347 0 0 0 0 0 0 0 0 0 0 0 0 0 3085 417 3031 29200 32188 32188 1 WKVDGVTQSSSNFQNSFTDQDSK Unmodified 2604.1728 0.17283859 110 CON__Q05B55 yes yes 0 0 0 0 1 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 63.314 67.274 3 3.3304E-06 12078 Miao_Sh-c_proteinG_mass3_141226_02 57.238 43.871 0 0 0 0 0 0 0 0 0 0 0 0 0 + 3086 110 3032 29201 32189 32189 1 WTLLQEQGTK Unmodified 1202.6295 0.62953741 98;105 P02538;CON__P02538;P48668;CON__P04259;CON__P48668;F8W0C6;P13647;CON__P13647 KRT6A;KRT6C;KRT5 Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 5 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 1 2 1 1 60.65 61.422 2 0.0020022 16836 Miao_Sh-H9_proteinG_mass3_141226_01 106.62 74.204 10623 2247.7 1113.3 0 0 712.36 0 0 1205.2 0 5344.5 0 0 + 3087 98;105 3033 29202;29203;29204;29205;29206;29207;29208 32190;32191;32192 32192 3 YAASSYLSLTSSDWK Unmodified 1677.7886 0.78861683 111 CON__Q1RMN8 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 2 4 2 1 1 1 1 85.793 82.986 2;3 4.7486E-42 16605 Miao_Sh-c_proteinG_mass3_141226_02 169.37 134.61 26431 0 0 1025.4 10220 8401.9 0 0 1032.6 0 2964.5 445 2341.9 + 3088 111 3034 29209;29210;29211;29212;29213;29214;29215;29216;29217;29218;29219;29220;29221 32193;32194;32195;32196;32197;32198;32199;32200;32201 32197 9 YALTGDEVK Unmodified 994.49713 0.49712625 511 P62701;P22090;Q8TD47;C9JEH7;A6NH36 RPS4X;RPS4Y1;RPS4Y2 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1;40S ribosomal protein S4, Y isoform 2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 42.953 45.877 2 0.016578 10720 Miao_Sh-H9_proteinG_mass3_141226_01 72.275 18.5 8954.3 0 0 0 127.53 0 3702.5 0 0 0 5124.3 0 0 3089 511 3035 29222;29223;29224 32202 32202 1 YALYDATYETK Unmodified 1336.6187 0.61869795 404 P23528;G3V1A4;E9PP50;E9PK25;E9PQB7;Q9Y281;E9PLJ3;Q9Y281-3 CFL1;CFL2 Cofilin-1;Cofilin-2 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 1 2 1 3 1 1 1 1 1 56.423 57.786 2 1.4709E-15 15649 Miao_Sh-H9_proteinG_mass3_141226_01 158.56 125.29 58651 288.6 2305.4 2294.2 4321.9 0 553.37 6281.1 6394.7 0 13967 11136 11108 3090 404 3036 29225;29226;29227;29228;29229;29230;29231;29232;29233;29234;29235;29236;29237;29238;29239 32203;32204;32205;32206;32207;32208;32209;32210;32211;32212;32213;32214;32215;32216;32217 32213 15 YAVLYQPLFDK Unmodified 1355.7125 0.71253876 22 P55209;H0YHC3;F8W020;F8W118;F8VXI6;F8VUX1;F8VY35;B3KV44;F8VV59;B7Z9C2;F8W0J6;F5H4R6;H0YIV4;P55209-2;F8VRJ2;H0YH88;F8W543;F8VVB5 NAP1L1 Nucleosome assembly protein 1-like 1 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 1 1 95.285 86.689 2 0.0037293 15162 Miao_Sh-c_Flag_mass3_141226_01 92.112 38.734 0 0 0 0 0 0 0 0 0 0 0 0 0 3091 22 3037 29240;29241 32218;32219 32218 2 YCFGVEDTLK Unmodified 1230.5591 0.55907458 510 P62495;B7Z7P8;Q96CG1 ETF1 Eukaryotic peptide chain release factor subunit 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 1 1 63.696 66.176 2 0.0021714 16957 Miao_Sh-c_proteinG_mass3_141226_03 112.3 85.248 12189 0 0 0 2867.3 0 3366.4 0 0 0 552.38 2834.6 2568.1 3092 510 3038 29242;29243;29244;29245;29246 32220;32221 32221 2 YCGQLQMIQEQISNLEAQITDVR Oxidation (M) 2752.316 0.31601412 432 P35527;CON__P35527;K7EQQ3 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 1 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 120.67 111.65 3 2.0464E-10 39615 Miao_Sh-H9_proteinG_mass3_141226_02 68.634 60.618 0 0 0 0 0 0 0 0 0 0 0 0 0 + 3093 432 3039 29247 32222 32222 56 1 YCVQLSQIQAQISALEEQLQQIR Unmodified 2745.412 0.41196342 104 P13645;CON__P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 3 1 2 2 2 2 116.24 113.69 3;4 2.7935E-89 28605 Miao_Sh-H9_Flag_mass3_141226_01 183.27 168.93 172020 13091 0 13909 36626 0 6427.6 4818.8 47657 42550 0 0 6938.3 + 3094 104 3040 29248;29249;29250;29251;29252;29253;29254;29255;29256;29257;29258;29259;29260;29261 32223;32224;32225;32226;32227;32228;32229;32230;32231;32232;32233;32234;32235;32236;32237;32238;32239;32240;32241;32242 32228 19 YDAFLASESLIK Unmodified 1355.6973 0.69728262 519 P62906 RPL10A 60S ribosomal protein L10a yes yes 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 4 3 1 2 2 2 3 100.06 90.109 2 0.0020088 16699 Miao_Sh-H9_Flag_mass3_141226_01 103.97 34.111 58646 0 0 0 0 10509 14699 1767.3 8061.4 0 10615 6012.5 6982 3095 519 3041 29262;29263;29264;29265;29266;29267;29268;29269;29270;29271;29272;29273;29274;29275;29276;29277;29278;29279;29280;29281;29282 32243;32244;32245;32246;32247;32248;32249;32250;32251;32252;32253;32254;32255;32256;32257;32258;32259;32260;32261;32262;32263;32264;32265 32251 23 YDDPPDWQEILTYFR Unmodified 1956.8894 0.8893935 114 P61221;H0Y990;D6RGF4;D6R9I9 ABCE1 ATP-binding cassette sub-family E member 1 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 112.59 112.74 2;3 0.0015912 25911 Miao_Sh-c_Flag_mass3_141226_01 63.29 58.673 0 0 0 0 0 0 0 0 0 0 0 0 0 3096 114 3042 29283;29284 32266;32267 32266 2 YDELYAALTALLAAGSQLDTVR Unmodified 2353.2165 0.2165413 594 Q5T4S7;Q5T4S7-3;Q5T4S7-4;Q5T4S7-2;Q5T4S7-5 UBR4 E3 ubiquitin-protein ligase UBR4 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 122.6 122.6 3 2.9595E-27 29761 Miao_Sh-c_Flag_mass3_141226_01 131.56 113.38 6429.8 6429.8 0 0 0 0 0 0 0 0 0 0 0 3097 594 3043 29285 32268 32268 1 YDFGIYDDDPEIITLER Unmodified 2072.9579 0.957867 609 Q8IXB1;Q8IXB1-2;Q8IXB1-3;E7EP04 DNAJC10 DnaJ homolog subfamily C member 10 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching 2 1 1 3 1 101.24 97.411 2;3 9.6903E-10 22028 Miao_Sh-c_proteinG_mass3_141226_01 94.366 81.198 4835 0 0 0 656.06 2887.4 0 0 0 0 0 0 1291.6 3098 609 3044 29286;29287;29288;29289;29290;29291;29292;29293 32269;32270;32271;32272;32273;32274 32269 6 YDGIILPGK Unmodified 974.54368 0.54368251 520 P62913;P62913-2 RPL11 60S ribosomal protein L11 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 2 1 1 2 1 1 63.501 64.335 2 0.0020161 14737 Miao_Sh-c_proteinG_mass3_141226_03 113.62 80.264 51808 0 0 0 3151.1 2189.3 12903 0 0 0 15148 819.8 17597 3099 520 3045 29294;29295;29296;29297;29298;29299;29300;29301 32275;32276;32277;32278;32279;32280 32276 6 YDPSIGIYGLDFYVVLGR Unmodified 2046.0462 0.046228496 520 P62913;P62913-2;Q5VVC8 RPL11 60S ribosomal protein L11 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 2 1 3 2 1 112.74 113.03 2;3 6.8485E-07 26087 Miao_Sh-c_Flag_mass3_141226_01 94.922 77.496 14081 2741.4 0 3371.4 0 0 0 0 3660.4 4307.8 0 0 0 3100 520 3046 29302;29303;29304;29305;29306;29307;29308;29309;29310;29311 32281;32282;32283;32284;32285;32286;32287;32288;32289;32290;32291;32292 32281 12 YDPSIGIYGLDFYVVLGRPGFSIADK Unmodified 2861.464 0.46398222 520 P62913;P62913-2;Q5VVC8 RPL11 60S ribosomal protein L11 yes no 0 0 0 0 1 By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 111.41 111.76 3 4.6187E-19 25817 Miao_Sh-c_Flag_mass3_141226_03 81.315 72.117 7013.4 0 7013.4 0 0 0 0 0 0 0 0 0 0 3101 520 3047 29312;29313 32293;32294 32294 2 YEELQITAGR Unmodified 1178.5932 0.5931519 314 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 no no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 2 3 2 4 3 1 5 4 8 58.19 58.07 2;3 1.3987E-140 12372 Miao_Sh-c_proteinG_mass3_141226_03 250.16 201.59 227470 2740.1 2391.3 0 2747.8 0 61974 8110.5 1318.5 0 11794 64018 72376 + 3102 314 3048 29314;29315;29316;29317;29318;29319;29320;29321;29322;29323;29324;29325;29326;29327;29328;29329;29330;29331;29332;29333;29334;29335;29336;29337;29338;29339;29340;29341;29342;29343;29344;29345 32295;32296;32297;32298;32299;32300;32301;32302;32303;32304;32305;32306;32307;32308;32309;32310;32311;32312;32313;32314;32315;32316;32317;32318;32319;32320;32321;32322;32323;32324;32325;32326;32327;32328;32329;32330;32331;32332;32333;32334 32301 38 YEELQQTAGR Unmodified 1193.5677 0.56766543 105 P13647;CON__P13647;H0YI76;H0YIN9 KRT5 Keratin, type II cytoskeletal 5 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 38.806 39.319 2 0.001241 7368 Miao_Sh-H9_proteinG_mass3_141226_03 112.13 50.167 1893.8 0 56.082 71.594 0 0 0 0 0 94.394 1671.7 0 0 + 3103 105 3049 29346;29347;29348;29349;29350;29351 32335;32336;32337 32337 3 YEELQSLAGK Unmodified 1136.5714 0.57135383 100 P05787;CON__P05787;P05787-2;CON__H-INV:HIT000292931 KRT8 Keratin, type II cytoskeletal 8 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching 1 1 1 2 1 2 52.337 53.571 2 0.002231 13204 Miao_Sh-H9_proteinG_mass3_141226_02 109.72 4.5177 15860 1268.3 0 0 0 0 3906.8 1548.4 2473.4 0 785.18 5877.6 0 + 3104 100 3050 29352;29353;29354;29355;29356;29357;29358;29359 32338;32339;32340 32340 3 YEELQVTAGR Unmodified 1164.5775 0.57750184 98 P02538;CON__P02538;P48668;CON__P04259;CON__P48668;O95678;CON__O95678 KRT6A;KRT6C;KRT75 Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 75 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 4 3 1 45.48 48.575 2 3.8989E-72 11207 Miao_Sh-H9_proteinG_mass3_141226_02 199.59 141.88 19940 0 327.75 0 0 0 4982.2 0 0 0 0 6274.3 8355.3 + 3105 98 3051 29360;29361;29362;29363;29364;29365;29366;29367;29368;29369 32341;32342;32343;32344;32345;32346;32347;32348;32349;32350;32351;32352;32353;32354 32351 14 YEELQVTVGR Unmodified 1192.6088 0.60880197 108 P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 54.829 55.079 2 0.0052381 8164 Miao_Sh-H9_Flag_mass3_141226_03 94.767 53.319 0 0 0 0 0 0 0 0 0 0 0 0 0 + 3106 108 3052 29370 32355 32355 1 YEFLWGPR Unmodified 1066.5236 0.52361577 451;452 P43363;O60732;O15480;A2A368;Q96M61;A8MXT2;Q3SYA6;Q8TD91-2;A0PK03;P43358;P43355;P43361 MAGEA10;MAGEC1;MAGEB3;MAGEB16;MAGEB18;MAGEB17;MAGEC3;MAGEA4;MAGEA1;MAGEA8 Melanoma-associated antigen 10;Melanoma-associated antigen C1;Melanoma-associated antigen B3;Melanoma-associated antigen B16;Melanoma-associated antigen B18;Melanoma-associated antigen B17;Melanoma-associated antigen 4;Melanoma-associated antigen 1;Melanoma-associated antigen 8 no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching 2 2 1 2 1 1 1 1 1 82.524 81.037 2 9.7896E-08 16560 Miao_Sh-c_proteinG_mass3_141226_01 153.71 112.21 29248 3743 4007.4 3196.8 6295.1 4292.9 0 5249.9 0 834.55 0 1243.7 384.91 3107 452;451 3053 29371;29372;29373;29374;29375;29376;29377;29378;29379;29380;29381;29382 32356;32357;32358;32359;32360;32361;32362;32363;32364;32365;32366;32367;32368;32369 32364 14 YEILQSVDDAAIVIK Unmodified 1675.9033 0.90325265 553 Q12906;Q12906-4;Q12906-5;Q12906-2;Q12906-6;Q12906-3;Q12906-7;K7EKJ9;K7EQR9;K7EKY0;K7ER69 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 93.338 91.283 2 0.00024757 19765 Miao_Sh-c_proteinG_mass3_141226_01 88.427 63.085 6680.1 0 0 268.11 3926.8 0 0 0 0 0 0 2485.2 0 3108 553 3054 29383;29384;29385;29386 32370;32371;32372 32370 3 YEILTPNAIPK Unmodified 1257.6969 0.69688869 434;158 P35580;P35580-3;P35580-2;F8W6L6;P35580-4;Q7Z406;F2Z2U8;G8JLL9;Q7Z406-6;Q7Z406-2;Q7Z406-5;Q7Z406-4;M0QY43 MYH10;MYH14 Myosin-10;Myosin-14 no no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 3 1 1 1 1 2 66.285 67.965 2 0.0015328 18966 Miao_Sh-H9_proteinG_mass3_141226_02 111.86 85.843 27927 0 0 0 4195 0 531.79 1939.4 2903.6 0 6655.1 5301.9 6400.2 3109 434;158 3055 29387;29388;29389;29390;29391;29392;29393;29394;29395;29396;29397 32373;32374;32375;32376;32377;32378;32379;32380;32381;32382;32383;32384;32385;32386;32387 32381 15 YEILTPNSIPK Unmodified 1273.6918 0.69180331 433 P35579;P35579-2 MYH9 Myosin-9 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 3 1 1 1 1 1 2 1 1 1 65.248 67.115 2 4.6646E-10 18218 Miao_Sh-H9_proteinG_mass3_141226_03 147.72 90.628 179290 0 0 0 17372 17627 30463 6774.5 7617.4 0 34049 34937 30453 3110 433 3056 29398;29399;29400;29401;29402;29403;29404;29405;29406;29407;29408;29409;29410;29411;29412 32388;32389;32390;32391;32392;32393;32394;32395;32396;32397;32398;32399;32400;32401;32402;32403;32404;32405;32406;32407;32408;32409;32410;32411;32412;32413;32414;32415;32416;32417;32418;32419;32420 32419 33 YELGRPAANTK Unmodified 1218.6357 0.63568542 499 P62241;Q5JR95 RPS8 40S ribosomal protein S8 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 35.397 36.884 2 0.037425 7152 Miao_Sh-H9_proteinG_mass3_141226_02 79.659 49.915 2106.5 528.61 0 0 0 0 0 0 0 0 0 779.19 798.76 3111 499 3057 29413;29414;29415 32421;32422 32422 2 YELISETGGSHDK Unmodified 1434.6627 0.66268803 553 Q12906;Q12906-4;Q12906-5;Q12906-2;Q12906-6;Q12906-3;Q12906-7;Q96SI9;Q96SI9-2 ILF3;STRBP Interleukin enhancer-binding factor 3;Spermatid perinuclear RNA-binding protein yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 2 2 1 2 1 1 2 3 42.569 44.378 2;3 0.00015652 10187 Miao_Sh-H9_proteinG_mass3_141226_01 84.753 65.095 11675 263.36 352.38 0 0 232.71 2406.6 0 87.764 0 3456 3106.5 1769.4 3112 553 3058 29416;29417;29418;29419;29420;29421;29422;29423;29424;29425;29426;29427;29428;29429 32423;32424;32425;32426;32427;32428 32425 6 YENEVALR Unmodified 992.49271 0.49270958 104 P13645;CON__P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 1 1 1 1 1 40.14 42.254 2 8.5848E-08 9372 Miao_Sh-H9_proteinG_mass3_141226_02 154.49 110.14 27252 0 0 0 99.067 751.73 6501.2 1048.9 856.79 899.94 5933.8 5759.5 5400.8 + 3113 104 3059 29430;29431;29432;29433;29434;29435;29436;29437;29438;29439;29440;29441 32429;32430;32431;32432;32433;32434;32435;32436;32437;32438;32439;32440 32436 12 YESSTASALVA Unmodified 1097.5241 0.52406928 505 P62277 RPS13 40S ribosomal protein S13 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 2 49.64 52.697 2 0.0034496 12451 Miao_Sh-H9_proteinG_mass3_141226_03 76.572 56.052 0 0 0 0 0 0 0 0 0 0 0 0 0 3114 505 3060 29442;29443 32441;32442 32442 2 YETELNLR Unmodified 1036.5189 0.51892433 97 P02533;CON__P02533 KRT14 Keratin, type I cytoskeletal 14 no no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 50.583 52.759 2 0.040164 12934 Miao_Sh-H9_proteinG_mass3_141226_02 69.598 0.68329 7358.4 348.82 0 0 130.61 0 2700.8 0 0 0 1971.2 2206.9 0 + 3115 97 3061 29444;29445;29446;29447;29448 32443 32443 1 YFDEISQDTGK Unmodified 1301.5776 0.57756142 510 P62495;B7Z7P8;Q96CG1 ETF1 Eukaryotic peptide chain release factor subunit 1 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 49.325 52.112 2 9.7404E-15 13219 Miao_Sh-H9_proteinG_mass3_141226_01 150.33 127.01 39540 0 0 0 1032.9 0 8613.9 0 0 0 11529 9258.7 9106.3 3116 510 3062 29449;29450;29451;29452;29453 32444;32445;32446;32447;32448;32449;32450 32448 7 YFILPDSLPLDTLLVDVEPK Unmodified 2286.2399 0.23990251 506 P62314;J3QLI9 SNRPD1 Small nuclear ribonucleoprotein Sm D1 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 2 1 4 2 2 3 1 119.33 118.92 2;3 1.2582E-16 30871 Miao_Sh-H9_Flag_mass3_141226_02 122.49 115.36 49875 0 7937.2 6449.9 11087 0 0 855.25 12751 10775 0 20.547 0 3117 506 3063 29454;29455;29456;29457;29458;29459;29460;29461;29462;29463;29464;29465;29466;29467;29468;29469 32451;32452;32453;32454;32455;32456;32457;32458;32459;32460;32461;32462;32463;32464;32465;32466 32463 16 YFPTQALNFAFK Unmodified 1445.7343 0.73433683 322;361 P12236;I7HJJ0;P12235;V9GYG0;Q9H0C2;P05141 SLC25A6;SLC25A4;SLC25A31;SLC25A5 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed;ADP/ATP translocase 1;ADP/ATP translocase 4;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 2 1 4 2 2 1 2 3 1 97.202 94.821 2 1.3591E-07 21281 Miao_Sh-H9_Flag_mass3_141226_03 133.32 71.977 76185 9211.2 601.48 8826.9 546.53 11970 5323 12253 17232 0 10221 0 0 3118 361;322 3064 29470;29471;29472;29473;29474;29475;29476;29477;29478;29479;29480;29481;29482;29483;29484;29485;29486;29487;29488 32467;32468;32469;32470;32471;32472;32473;32474;32475;32476;32477;32478;32479;32480;32481;32482;32483;32484;32485 32482 19 YFQINQDEEEEEDED Unmodified 1930.7228 0.72284126 250 P35268;K7ERI7 RPL22 60S ribosomal protein L22 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 65.078 66.457 2 1.7264E-08 18276 Miao_Sh-H9_proteinG_mass3_141226_01 108.36 105.89 0 0 0 0 0 0 0 0 0 0 0 0 0 3119 250 3065 29489;29490 32486;32487 32486 2 YGEPGEVFINK Unmodified 1251.6136 0.61355299 399 P23246;P23246-2 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 2 1 1 1 1 56.272 57.747 2 0.00393 15143 Miao_Sh-H9_proteinG_mass3_141226_02 88.83 62.851 19937 407.02 839.54 1049.7 0 0 1118.1 1454.9 0 0 815.78 14252 0 3120 399 3066 29491;29492;29493;29494;29495;29496;29497;29498;29499 32488;32489;32490;32491 32491 4 YGEPTLR Unmodified 834.42357 0.42356738 559 Q13200;E9PCS3;E7EW34;H7C1H2 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 39.812 41.491 2 0.022833 4203 Miao_Sh-c_Flag_mass3_141226_01 91.626 59.156 2007.1 251.72 0 61.983 0 0 1435.6 257.83 0 0 0 0 0 3121 559 3067 29500;29501;29502;29503 32492;32493 32492 2 YGEVFEPTVER Unmodified 1324.6299 0.62993134 257 P30530;M0R0W6;P30530-2 AXL Tyrosine-protein kinase receptor UFO yes no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 1 1 1 59.973 58.912 2 0.003087 8049 Miao_Sh-c_Flag_mass3_141226_01 92.943 64.862 5206.3 992.7 0 0 0 348.85 1203 1327.5 0 0 1236.3 0 97.923 3122 257 3068 29504;29505;29506;29507;29508;29509 32494;32495 32494 2 YGFIEGHVVIPR Unmodified 1385.7456 0.74557022 127 P16070;H0YD13;H0Y2P0;E7EPC6;P16070-18;P16070-12;P16070-14;P16070-13;P16070-11;P16070-10;P16070-16;P16070-8;P16070-17;P16070-6;P16070-4;P16070-3;P16070-7;P16070-5;H0YDX6;H0YD17;H0YDW7;H0YCV9;H0Y5E4;P16070-15;P16070-9 CD44 CD44 antigen yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 2 2 2 1 1 1 1 1 66.211 67.882 3 0.00091246 12710 Miao_Sh-H9_Flag_mass3_141226_03 87.568 74.591 12034 1458.9 0 1305 1010.2 1074.5 775.92 1543.7 2417.7 2094.8 0 0 353.3 3123 127 3069 29510;29511;29512;29513;29514;29515;29516;29517;29518;29519;29520;29521;29522 32496;32497;32498;32499;32500;32501;32502 32502 7 YGFQEQLLYSVLEELVNSGR Unmodified 2343.1747 0.17467649 301 O94874;O94874-3;O94874-2 UFL1 E3 UFM1-protein ligase 1 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 119.86 120.53 3 0.0018281 29066 Miao_Sh-c_Flag_mass3_141226_01 49.125 22.833 3067.7 0 0 1776.8 0 0 0 0 0 1290.9 0 0 0 3124 301 3070 29523;29524;29525 32503;32504 32503 2 YGGPPPDSVYSGQQPSVGTEIFVGK Unmodified 2565.2387 0.23873331 286 O60506-4;O60506-3;O60506;O60506-2;F6UXX1 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching 1 2 1 85.053 72.873 3 0.0034136 25598 Miao_Sh-H9_proteinG_mass3_141226_01 40.706 32.218 2765.3 0 0 0 0 0 0 0 0 0 2765.3 0 0 3125 286 3071 29526;29527;29528;29529 32505;32506;32507;32508;32509 32508 5 YGLLQVSEGLSFLHSSVK Unmodified 1963.0415 0.041477469 599 Q6P3W7;F8VSC5 SCYL2 SCY1-like protein 2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 97.731 97.53 3 0.01247 22935 Miao_Sh-H9_Flag_mass3_141226_02 40.968 26.788 5978.4 0 0 0 0 0 0 0 5978.4 0 0 0 0 3126 599 3072 29530 32510 32510 1 YGLSSMQGWR Unmodified 1183.5444 0.54442757 297;296 O75688-2;C9JIR6;O75688-4;B8ZZF0;O75688-5;P35813;P35813-2;P35813-3;E9PKB5;E9PL75;E9PJN3;O75688 PPM1B;PPM1A Protein phosphatase 1B;Protein phosphatase 1A no no 0 0 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 1 64.152 65.555 2 0.0015409 12331 Miao_Sh-H9_Flag_mass3_141226_01 110.88 91.904 11116 5035.7 0 0 0 372.29 0 0 0 2859.3 1756.9 0 1091.8 3127 297;296 3073 29531;29532;29533;29534;29535;29536 32511;32512 32512 1 YGLSSMQGWR Oxidation (M) 1199.5393 0.53934219 297;296 O75688-2;C9JIR6;O75688-4;B8ZZF0;O75688-5;P35813;P35813-2;P35813-3;E9PKB5;E9PL75;E9PJN3;O75688 PPM1B;PPM1A Protein phosphatase 1B;Protein phosphatase 1A no no 0 0 1 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 54.294 54.244 2 0.043463 7650 Miao_Sh-H9_Flag_mass3_141226_01 65.278 49.312 0 0 0 0 0 0 0 0 0 0 0 0 0 3128 297;296 3073 29537 32513 32513 1 YGQFSGLNPGGRPITPPR Unmodified 1912.9908 0.9907793 497 P62136;P62136-2;P62136-3 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 60.015 60.792 3 0.039091 16287 Miao_Sh-H9_proteinG_mass3_141226_01 39.91 28.13 6997.3 0 0 0 0 0 0 1205.9 0 1958.1 2544.6 0 1288.7 3129 497 3074 29538;29539;29540;29541 32514 32514 1 YGQISEVVVVK Unmodified 1219.6812 0.68123863 55 Q14011;K7ELV6;K7ENX8;K7EJV5;K7ELT6;K7EMY9;K7EPM4;K7ER40;K7EQR7;D6W5Y5;B4E2X2 CIRBP Cold-inducible RNA-binding protein yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 1 55.894 60.055 2 0.033607 9390 Miao_Sh-c_proteinG_mass3_141226_02 51.135 34.515 0 0 0 0 0 0 0 0 0 0 0 0 0 3130 55 3075 29542 32515 32515 1 YGTTPPQLDADSSYFLYSK Unmodified 2152.0001 6.61646E-05 92;93 CON__ENSEMBL:ENSBTAP00000024462;CON__ENSEMBL:ENSBTAP00000024466 no no 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 7 2 2 5 20 89.633 82.156 2;3 1.7335E-63 30102 Miao_Sh-H9_proteinG_mass3_141226_03 182.98 168.4 98105 0 0 0 26519 18790 0 0 0 0 19647 17050 16099 + 3131 92;93 3076 29543;29544;29545;29546;29547;29548;29549;29550;29551;29552;29553;29554;29555;29556;29557;29558;29559;29560;29561;29562;29563;29564;29565;29566;29567;29568;29569;29570;29571;29572;29573;29574;29575;29576;29577;29578 32516;32517;32518;32519;32520;32521;32522;32523;32524;32525;32526;32527;32528;32529;32530;32531;32532;32533;32534;32535;32536;32537;32538;32539;32540;32541;32542;32543;32544;32545;32546;32547;32548;32549;32550;32551;32552;32553;32554;32555;32556;32557;32558;32559;32560;32561;32562;32563;32564;32565;32566;32567;32568;32569;32570;32571;32572 32550 57 YGVGWYQQVPGSGLR Unmodified 1665.8263 0.82633974 90 CON__ENSEMBL:ENSBTAP00000014147 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching 1 2 3 2 1 1 76.087 75.324 2;3 1.0808E-23 20228 Miao_Sh-c_proteinG_mass3_141226_03 145.86 121.9 18279 0 0 568.8 6465.1 5867.4 660.09 0 0 0 3760.1 957.83 0 + 3132 90 3077 29579;29580;29581;29582;29583;29584;29585;29586;29587;29588 32573;32574;32575;32576;32577;32578;32579 32579 7 YHEQLSTQSLIELFESFK Unmodified 2198.0895 0.089549874 535 Q00610;Q00610-2 CLTC Clathrin heavy chain 1 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 111.14 112.73 3 5.3664E-14 25596 Miao_Sh-c_Flag_mass3_141226_01 128.1 113.51 17975 7885.1 0 0 0 2044.3 0 0 8045.4 0 0 0 0 3133 535 3078 29589;29590;29591;29592;29593;29594 32580;32581;32582;32583;32584;32585;32586;32587 32581 8 YHTINGHNAEVR Unmodified 1409.68 0.68000985 397 P22626;P22626-2 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching 1 2 3 1 1 28.695 31.831 2;3;4 0.00012602 5486 Miao_Sh-c_proteinG_mass3_141226_03 103.21 60.865 6919 0 0 0 42.084 305.05 4460 0 0 0 1051.2 1060.6 0 3134 397 3079 29595;29596;29597;29598;29599;29600;29601;29602 32588;32589;32590;32591 32590 4 YHTINGHNCEVK Unmodified 1470.6674 0.66739625 470 P51991;P51991-2 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 28.59 29.041 3 0.050017 6007 Miao_Sh-H9_proteinG_mass3_141226_01 36.417 25.471 414.94 0 0 0 0 0 0 0 0 0 414.94 0 0 3135 470 3080 29603 32592 32592 1 YHVPVVVVPEGSASDTHEQAILR Unmodified 2502.2867 0.28668655 319 P04844;P04844-2;Q5JYR7;Q5JYR4 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 67.175 67.426 4 0.0017354 10985 Miao_Sh-c_Flag_mass3_141226_02 37.4 33.788 1300.5 0 1300.5 0 0 0 0 0 0 0 0 0 0 3136 319 3081 29604 32593 32593 0 YIDQEELNK Unmodified 1150.5506 0.55061839 344;341;590 P07900;P07900-2;Q86U12;Q14568;Q58FF8;P08238 HSP90AA1;HSP90AA2;HSP90AB2P;HSP90AB1 Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A2;Putative heat shock protein HSP 90-beta 2;Heat shock protein HSP 90-beta no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 1 1 1 1 1 1 40.01 41.641 2 4.84E-07 9537 Miao_Sh-H9_proteinG_mass3_141226_01 141.29 59.651 22791 643.87 661.52 616.87 321.93 485.49 3655.2 530.52 646.98 715.62 7661.8 3361.6 3489.4 3137 341;590;344 3082 29605;29606;29607;29608;29609;29610;29611;29612;29613;29614;29615;29616;29617 32594;32595;32596;32597;32598;32599;32600;32601;32602;32603;32604;32605;32606;32607 32605 13 YIEIYVQK Unmodified 1054.5699 0.56989727 535 Q00610;Q00610-2;P53675;J3KR87;P53675-2 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain 2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 58.165 57.362 2 0.017735 8890 Miao_Sh-H9_Flag_mass3_141226_02 79.713 55.51 0 0 0 0 0 0 0 0 0 0 0 0 0 3138 535 3083 29618 32608 32608 1 YIFPLDDK Unmodified 1009.512 0.51204804 664 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 2 1 1 84.104 77.487 2 0.018837 18378 Miao_Sh-c_proteinG_mass3_141226_03 78.516 37.068 3186.4 986.11 0 0 0 0 383.74 0 663.86 0 1152.7 0 0 3139 664 3084 29619;29620;29621;29622;29623;29624 32609;32610;32611 32610 3 YIPTEDVSGLSLEEQLR Unmodified 1947.9789 0.97893679 150 Q13490;E9PMH5;Q13490-2;E9PI77 BIRC2 Baculoviral IAP repeat-containing protein 2 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 3 2 1 82.575 80.205 2;3 4.2907E-09 15268 Miao_Sh-c_Flag_mass3_141226_02 87.99 67.754 11759 0 0 1332.7 1051.1 0 0 0 5512.2 3234.8 0 0 627.88 3140 150 3085 29625;29626;29627;29628;29629;29630;29631;29632;29633;29634 32612;32613;32614;32615;32616;32617 32612 6 YIQELWR Unmodified 1006.5236 0.52361577 128 P61313;E7EQV9;E7ENU7;E7EX53;P61313-2;E7ERA2 RPL15 60S ribosomal protein L15;Ribosomal protein L15 yes no 0 0 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 1 64.928 65.496 2 0.00027645 11529 Miao_Sh-H9_Flag_mass3_141226_01 145.34 75.343 17846 2629.3 0 1893.4 4093.5 0 0 3287.4 3793 0 0 2149.2 0 3141 128 3086 29635;29636;29637;29638;29639;29640;29641 32618;32619;32620;32621;32622;32623;32624 32621 7 YISPDQLADLYK Unmodified 1424.7187 0.71874635 333 P06733;P06733-2 ENO1 Alpha-enolase yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 6 3 2 4 2 5 2 4 4 2 87.417 83.049 2;3 5.9647E-19 30929 Miao_Sh-H9_proteinG_mass3_141226_02 115.57 84.962 254070 16510 16112 17563 18234 17955 21440 23334 25452 18703 35639 25199 17931 3142 333 3087 29642;29643;29644;29645;29646;29647;29648;29649;29650;29651;29652;29653;29654;29655;29656;29657;29658;29659;29660;29661;29662;29663;29664;29665;29666;29667;29668;29669;29670;29671;29672;29673;29674;29675;29676;29677;29678;29679;29680;29681 32625;32626;32627;32628;32629;32630;32631;32632;32633;32634;32635;32636;32637;32638;32639;32640;32641;32642;32643;32644;32645;32646;32647;32648;32649;32650;32651;32652;32653;32654;32655;32656;32657;32658;32659;32660;32661;32662;32663;32664;32665;32666;32667;32668;32669;32670;32671;32672;32673;32674;32675;32676;32677;32678;32679;32680;32681;32682 32675 57 YITQNGDYQLR Unmodified 1369.6626 0.66262845 25 Q9BXS5;K7EJL1;B4DDG7;E7ENJ6;Q9BXS5-2 AP1M1 AP-1 complex subunit mu-1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 48.606 51.213 2 0.027906 12355 Miao_Sh-H9_proteinG_mass3_141226_02 54.259 36.2 0 0 0 0 0 0 0 0 0 0 0 0 0 3143 25 3088 29682 32683 32683 1 YKPLDLRPK Unmodified 1128.6655 0.66552898 450 P42766 RPL35 60S ribosomal protein L35 yes yes 0 0 0 0 2 By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 1 2 3 3 61.625 57.837 3 0.0055594 30697 Miao_Sh-H9_proteinG_mass3_141226_02 102.62 69.623 35669 1730 748.56 735.66 945.02 1135.4 9186.3 0 1905.7 0 9004.9 4435.4 5842.5 3144 450 3089 29683;29684;29685;29686;29687;29688;29689;29690;29691;29692;29693;29694;29695;29696;29697;29698 32684;32685;32686;32687;32688;32689;32690;32691;32692;32693;32694;32695;32696;32697;32698;32699 32696 15 YLAEFATGNDR Unmodified 1255.5833 0.5833155 500 P62258;P62258-2;K7EM20 YWHAE 14-3-3 protein epsilon yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 1 52.519 54.319 2 0.014374 12677 Miao_Sh-c_proteinG_mass3_141226_03 64.64 35.944 5391.8 0 633.12 0 0 0 1718.9 0 0 1759.8 1279.9 0 0 3145 500 3090 29699;29700;29701;29702 32700 32700 1 YLAEVAAGDDK Unmodified 1150.5506 0.55061839 523 P63104;E7EX29;B0AZS6;P63104-2;B7Z2E6;H0YB80 YWHAZ 14-3-3 protein zeta/delta yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 1 2 1 1 1 2 1 1 41.582 42.712 2 0.0060001 8882 Miao_Sh-c_proteinG_mass3_141226_03 80.245 44.8 10393 331.46 281.77 0 366.5 0 2922.3 577.68 223.91 704 0 2554.8 2430.1 3146 523 3091 29703;29704;29705;29706;29707;29708;29709;29710;29711;29712;29713 32701;32702;32703;32704;32705;32706 32704 6 YLAEVATGEK Unmodified 1079.5499 0.5498901 495 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 2 1 1 1 1 1 3 41.021 42.844 2 0.0044275 8772 Miao_Sh-c_proteinG_mass3_141226_03 88.056 45.769 10556 0 0 98.089 0 0 2390.3 134.61 476.31 0 2593.9 1901.8 2961.3 3147 495 3092 29714;29715;29716;29717;29718;29719;29720;29721;29722;29723 32707;32708;32709;32710 32708 4 YLDGLTAER Unmodified 1036.5189 0.51892433 108 P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 52.57 53.556 2 0.016776 7645 Miao_Sh-H9_Flag_mass3_141226_03 72.607 32.339 0 0 0 0 0 0 0 0 0 0 0 0 0 + 3148 108 3093 29724;29725;29726 32711;32712;32713 32712 3 YLDLILNDFVR Unmodified 1379.7449 0.74490152 575 Q15046;Q15046-2;J3KRL2;H3BPV7 KARS Lysine--tRNA ligase yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 101.05 101.42 2 0.0053166 24739 Miao_Sh-c_proteinG_mass3_141226_01 81.92 51.916 6276.8 0 0 0 2118.7 0 0 0 2039.4 2118.7 0 0 0 3149 575 3094 29727;29728;29729 32714;32715 32714 2 YLEVVLNTLQQASQAQVDK Unmodified 2146.127 0.12699801 574 Q14974;Q14974-2;F5H4R7;J3KTM9 KPNB1 Importin subunit beta-1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 108.66 96.477 3 0.00012293 34594 Miao_Sh-H9_proteinG_mass3_141226_01 58.024 48.029 0 0 0 0 0 0 0 0 0 0 0 0 0 3150 574 3095 29730 32716 32716 1 YLIANATNPESK Unmodified 1319.6721 0.67213051 418 P27348;E9PG15 YWHAQ 14-3-3 protein theta yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 45.582 47.554 2 0.00010093 10340 Miao_Sh-c_proteinG_mass3_141226_03 85.554 55.811 2298.8 231.34 0 0 0 0 1942.6 124.85 0 0 0 0 0 3151 418 3096 29731;29732;29733 32717 32717 0 YLIPNATQPESK Unmodified 1359.7034 0.70343063 427 P31946;P31946-2 YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 1 51.652 54.559 2 0.0037722 11779 Miao_Sh-c_proteinG_mass3_141226_03 78.705 59.39 6136.2 0 0 0 634.03 769.61 2994.5 1738.1 0 0 0 0 0 3152 427 3097 29734;29735;29736;29737 32718 32718 1 YLNPLLGEWK Unmodified 1231.6601 0.66010926 60 Q53GT1;B7Z2G1 KLHL22 Kelch-like protein 22 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 1 89.619 84.256 2 0.041927 18811 Miao_Sh-c_proteinG_mass3_141226_01 57.532 35.539 2509.8 0 0 0 1913 0 0 0 0 0 596.84 0 0 3153 60 3098 29738;29739 32719 32719 1 YLSLLYPAR Unmodified 1094.6124 0.61243078 664 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 1 1 2 1 78.157 72.743 2 0.002277 14217 Miao_Sh-c_proteinG_mass3_141226_01 107.57 67.223 3429.8 0 0 0 3080.7 0 0 0 0 0 349.15 0 0 3154 664 3099 29740;29741;29742;29743;29744 32720;32721;32722;32723;32724 32721 5 YLTVAAIFR Unmodified 1052.6019 0.6018661 566 Q9BVA1;Q13885 TUBB2B;TUBB2A Tubulin beta-2B chain;Tubulin beta-2A chain yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching 2 2 2 2 1 1 2 1 2 1 90.71 89.096 2 0.0022231 16772 Miao_Sh-c_Flag_mass3_141226_01 97.431 40.15 345710 2166.6 315870 15741 2079.2 591.64 0 1068.9 2790.6 2205.4 2701.8 492.41 0 3155 566 3100 29745;29746;29747;29748;29749;29750;29751;29752;29753;29754;29755;29756;29757;29758;29759;29760 32725;32726;32727;32728;32729;32730;32731 32725 7 YLTVAAVFR Unmodified 1038.5862 0.58621603 338;530;315 P07437;Q5JP53;Q5ST81;P68371;P04350 TUBB;TUBB4B;TUBB4A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-4A chain no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 6 1 2 2 2 1 3 2 3 3 81.453 76.31 2 2.4003E-64 15477 Miao_Sh-H9_Flag_mass3_141226_01 211.85 134.78 299050 27573 33846 0 20155 14444 17462 40872 40114 44841 26436 17037 16272 3156 338;530;315 3101 29761;29762;29763;29764;29765;29766;29767;29768;29769;29770;29771;29772;29773;29774;29775;29776;29777;29778;29779;29780;29781;29782;29783;29784;29785;29786;29787;29788 32732;32733;32734;32735;32736;32737;32738;32739;32740;32741;32742;32743;32744;32745;32746;32747;32748;32749;32750;32751;32752;32753;32754;32755;32756;32757;32758;32759;32760;32761;32762;32763;32764;32765;32766;32767;32768;32769;32770;32771;32772;32773;32774;32775;32776;32777;32778;32779;32780;32781;32782;32783;32784;32785 32761 54 YLTVATVFR Unmodified 1068.5968 0.59678072 642;564 Q9BUF5;K7ESM5;Q13509;Q13509-2 TUBB6;TUBB3 Tubulin beta-6 chain;Tubulin beta-3 chain no no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 2 1 2 2 2 3 2 85.42 80.832 2 4.5085E-15 13549 Miao_Sh-c_Flag_mass3_141226_02 166.61 127.78 57547 4487.2 4763 4635.2 4454.2 0 4540.5 6975.6 7167.4 7515.3 6350.1 1498 5160.8 3157 642;564 3102 29789;29790;29791;29792;29793;29794;29795;29796;29797;29798;29799;29800;29801;29802;29803;29804;29805;29806;29807 32786;32787;32788;32789;32790;32791;32792;32793;32794;32795;32796;32797;32798;32799;32800;32801;32802;32803;32804;32805;32806;32807;32808;32809;32810;32811;32812;32813;32814;32815;32816 32789 31 YLYEIAR Unmodified 926.48617 0.48616764 99 CON__P02769;P02768;H0YA55;CON__P02768-1;H7C013 ALB Serum albumin yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 55.039 55.69 2 0.035321 14546 Miao_Sh-H9_proteinG_mass3_141226_01 72.138 27.528 0 0 0 0 0 0 0 0 0 0 0 0 0 + 3158 99 3103 29808 32817 32817 1 YLYSSEDYIK Unmodified 1279.5972 0.59723423 559 Q13200;E9PCS3;E7EW34 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 2 59.134 59.259 2 0.0066775 10076 Miao_Sh-H9_Flag_mass3_141226_03 78.488 41.931 4488.6 0 0 522.67 0 0 0 2295.1 615.69 1055.1 0 0 0 3159 559 3104 29809;29810;29811;29812;29813 32818;32819 32819 2 YLYTLVITDK Unmodified 1227.6751 0.67509062 232 P63173;J3KT73;J3QL01 RPL38 60S ribosomal protein L38 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 2 1 79.644 74.781 2 0.0071451 32247 Miao_Sh-H9_proteinG_mass3_141226_02 76.843 58.618 5944.2 0 0 0 0 0 0 0 4895.1 0 0 1049 0 3160 232 3105 29814;29815;29816;29817;29818 32820;32821;32822;32823 32822 4 YNEDLELEDAIHTAILTLK Unmodified 2200.1263 0.12632931 411 P25787;C9JCK5 PSMA2 Proteasome subunit alpha type-2 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 110.54 111.03 3 6.4348E-08 25372 Miao_Sh-c_Flag_mass3_141226_02 77.357 69.049 11747 1871.6 3806.4 2882 524.39 0 0 2662.8 0 0 0 0 0 3161 411 3106 29819;29820;29821;29822;29823 32824;32825;32826;32827 32825 4 YPDSHQLFVGNLPHDIDENELK Unmodified 2579.2292 0.22923125 668 Q9UN86;Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 1 74.519 75.973 4 0.040347 15173 Miao_Sh-c_proteinG_mass3_141226_01 23.913 15.897 2216.9 0 0 0 2216.9 0 0 0 0 0 0 0 0 3162 668 3107 29824 32828 32828 0 YPENFFLLR Unmodified 1197.6182 0.61824444 497 P62136;E9PMD7;P62136-2;P62136-3;P62140;P36873;F8VYE8;F8W0W8;P36873-2;C9J9S3;C9JP48;E7ETD8;F8VR82 PPP1CA;PPP1CB;PPP1CC Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 1 1 2 1 89.642 85.799 2 0.0043812 19487 Miao_Sh-H9_Flag_mass3_141226_03 88.37 54.184 2991.9 0 0 829 0 0 0 1684.5 0 0 478.49 0 0 3163 497 3108 29825;29826;29827;29828;29829 32829;32830;32831 32830 3 YPFIVTSDDGR Unmodified 1268.6037 0.60371659 393 P21589;P21589-2;H0Y7R7 NT5E 5'-nucleotidase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 61.853 62.83 2 0.028058 11171 Miao_Sh-H9_Flag_mass3_141226_02 58.132 35.603 5648.6 0 0 0 0 0 0 952.14 1725 0 0 1049 1922.4 3164 393 3109 29830;29831;29832;29833 32832 32832 1 YPIEHGIITNWDDMEK Unmodified 1959.9037 0.90366336 528 P68133;P68032;Q5T8M8;A6NL76;P63267;P62736;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 ACTA1;ACTC1;ACTG2;ACTA2 Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle yes no 0 0 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 2 1 70.614 71.917 3 0.010144 13882 Miao_Sh-c_proteinG_mass3_141226_01 46.249 25.46 11052 889.5 0 0 0 5612.6 0 0 0 4550 0 0 0 3165 528 3110 29834;29835;29836;29837;29838;29839 32833;32834;32835;32836 32833 4 YPMAVGLNK Unmodified 991.51609 0.51608756 681 Q9Y3U8;J3QSB5;J3KTD3 RPL36 60S ribosomal protein L36 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 52.205 52.957 2 0.021253 13517 Miao_Sh-H9_proteinG_mass3_141226_01 68.383 16.81 0 0 0 0 0 0 0 0 0 0 0 0 0 3166 681 3111 29840 32837 32837 1 YPQLLPGIR Unmodified 1055.6128 0.61276513 403 P23526;P23526-2 AHCY Adenosylhomocysteinase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 2 1 1 73.948 71.442 2 0.037859 21295 Miao_Sh-H9_proteinG_mass3_141226_01 59.597 36.021 5695.7 0 0 0 0 0 0 1667.9 647.29 785.82 1019.5 1273.5 301.69 3167 403 3112 29841;29842;29843;29844;29845;29846;29847 32838;32839;32840 32838 3 YQAVTATLEEK Unmodified 1251.6347 0.63468237 445 P40429;M0QYS1;Q6NVV1 RPL13A;RPL13AP3 60S ribosomal protein L13a;Putative 60S ribosomal protein L13a protein RPL13AP3 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 2 1 1 47.915 49.92 2 0.00069588 10861 Miao_Sh-c_proteinG_mass3_141226_03 118.77 63.655 37851 0 0 58.146 0 0 8788.2 0 1473 0 15121 12411 0 3168 445 3113 29848;29849;29850;29851;29852;29853 32841;32842;32843;32844;32845;32846;32847;32848;32849 32842 9 YQEVTNNLEFAK Unmodified 1454.7042 0.70415892 189 Q14444;G3V153;Q14444-2;E9PP31;E9PLA9 CAPRIN1 Caprin-1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 58.576 59.027 2 0.038267 15894 Miao_Sh-H9_proteinG_mass3_141226_01 46.069 19.952 0 0 0 0 0 0 0 0 0 0 0 0 0 3169 189 3114 29854 32850 32850 1 YQGGFLISR Unmodified 1039.5451 0.5450795 149 P55786;E9PLK3;B7Z463;H0YDG0 NPEPPS Puromycin-sensitive aminopeptidase yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 1 1 57.096 60.203 2 0.022599 14772 Miao_Sh-c_proteinG_mass3_141226_03 67.113 29.385 0 0 0 0 0 0 0 0 0 0 0 0 0 3170 149 3115 29855;29856 32851;32852 32851 2 YQGTILSIDDNLQR Unmodified 1634.8264 0.82639932 540 Q02413 DSG1 Desmoglein-1 yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 71.634 71.684 2 0.014805 20954 Miao_Sh-H9_proteinG_mass3_141226_01 51.643 38.543 0 0 0 0 0 0 0 0 0 0 0 0 0 3171 540 3116 29857 32853 32853 1 YQILPLHSQIPR Unmodified 1463.8249 0.82488317 548 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By matching 2 1 1 1 1 1 1 63.242 64.365 3 0.0021558 11331 Miao_Sh-c_proteinG_mass3_141226_02 71.085 54.555 6589.2 499.99 0 1066.5 1930.8 1511.9 0 0 1580 0 0 0 0 3172 548 3117 29858;29859;29860;29861;29862;29863;29864;29865 32854;32855;32856;32857;32858 32856 5 YSGTLNLDR Unmodified 1037.5142 0.5141733 464 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 45.58 48.187 2 0.025362 11308 Miao_Sh-H9_proteinG_mass3_141226_02 65.719 24.996 0 0 0 0 0 0 0 0 0 0 0 0 0 3173 464 3118 29866 32859 32859 1 YSLDPENPTK Unmodified 1162.5506 0.55061839 231 P18621;J3QQT2;J3KRX5;P18621-3;J3QS96;J3KRB3;J3KSJ0 RPL17 60S ribosomal protein L17 yes no 0 0 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 1 1 1 2 3 1 1 48.881 50.686 2 2.7791E-55 11096 Miao_Sh-c_proteinG_mass3_141226_03 199.68 151.5 60121 1068.4 0 0 446.55 951.07 12890 2042.7 2450.9 2659.6 0 14418 23194 3174 231 3119 29867;29868;29869;29870;29871;29872;29873;29874;29875;29876;29877;29878;29879;29880;29881 32860;32861;32862;32863;32864;32865;32866;32867;32868;32869;32870;32871;32872;32873;32874;32875;32876;32877;32878;32879;32880 32864 21 YSLEPVAVELK Unmodified 1246.6809 0.68090428 63 P00558;B7Z7A9 PGK1 Phosphoglycerate kinase 1 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 2 1 1 1 1 1 70.669 71.622 2 0.00022719 20636 Miao_Sh-H9_proteinG_mass3_141226_02 125.54 81.862 41795 0 0 0 9968.6 0 0 4104.9 4545.1 0 11508 7074.1 4594.3 3175 63 3120 29882;29883;29884;29885;29886;29887;29888;29889 32881;32882;32883;32884;32885;32886;32887;32888;32889 32886 9 YSQLVVETIR Unmodified 1206.6608 0.66083754 623 Q92522 H1FX Histone H1x yes yes 0 0 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 2 1 1 3 2 1 1 1 58.885 60.088 2 4.7216E-25 9674 Miao_Sh-c_proteinG_mass3_141226_02 171.67 126.91 82841 0 4305.2 0 0 5682.2 29930 3313.6 3668.8 0 23451 12489 0 3176 623 3121 29890;29891;29892;29893;29894;29895;29896;29897;29898;29899;29900;29901;29902 32890;32891;32892;32893;32894;32895;32896;32897;32898;32899;32900;32901 32894 11 YSQVLANGLDNK Unmodified 1320.6674 0.66737948 503 P62269;J3JS69 RPS18 40S ribosomal protein S18 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 1 1 2 1 3 3 2 48.146 50.462 2;3 2.9225E-54 11861 Miao_Sh-H9_proteinG_mass3_141226_03 193.34 130.12 59862 0 1017.2 550.82 283.56 1284.6 17089 644.8 0 0 21615 4570.3 12806 3177 503 3122 29903;29904;29905;29906;29907;29908;29909;29910;29911;29912;29913;29914;29915;29916;29917;29918 32902;32903;32904;32905;32906;32907;32908;32909;32910;32911 32910 10 YSTPVDIWSIGTIFAELATK Unmodified 2211.1463 0.14633647 330 P06493;P06493-2 CDK1 Cyclin-dependent kinase 1 yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 2 122.17 122.77 3 1.4087E-05 32244 Miao_Sh-H9_Flag_mass3_141226_02 64.843 52.942 0 0 0 0 0 0 0 0 0 0 0 0 0 3178 330 3123 29919;29920 32912;32913 32912 2 YSVDIPLDK Unmodified 1048.5441 0.54407645 493 P61353;K7ELC7;K7EQQ9 RPL27 60S ribosomal protein L27 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 2 1 1 2 61.383 62.928 2 2.8773E-39 17085 Miao_Sh-H9_proteinG_mass3_141226_02 191.1 139.37 150730 0 4198.3 0 479.69 6814.5 26609 10369 9159.7 11840 30897 27699 22663 3179 493 3124 29921;29922;29923;29924;29925;29926;29927;29928;29929;29930;29931;29932 32914;32915;32916;32917;32918;32919;32920;32921;32922;32923;32924;32925;32926;32927;32928;32929;32930;32931;32932;32933;32934;32935 32930 22 YVASYLLAALGGNSSPSAK Unmodified 1867.968 0.96797818 325 P05387 RPLP2 60S acidic ribosomal protein P2 yes yes 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 3 3 2 2 8 2 2 2 3 102.71 97.343 2;3 2.5845E-30 20333 Miao_Sh-H9_Flag_mass3_141226_01 137.99 118.31 88166 12353 0 0 5435.7 802.48 1030.2 13868 15065 0 13306 13527 12779 3180 325 3125 29933;29934;29935;29936;29937;29938;29939;29940;29941;29942;29943;29944;29945;29946;29947;29948;29949;29950;29951;29952;29953;29954;29955;29956;29957;29958;29959;29960;29961 32936;32937;32938;32939;32940;32941;32942;32943;32944;32945;32946;32947;32948;32949;32950;32951;32952;32953;32954;32955;32956;32957;32958;32959;32960;32961;32962;32963;32964;32965;32966;32967;32968;32969 32952 34 YVDSEGHLYTVPIR Unmodified 1647.8257 0.82567103 543 Q03135 CAV1 Caveolin-1 yes yes 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 4 1 7 1 1 2 2 2 57.86 58.532 2;3 5.8784E-42 9298 Miao_Sh-H9_Flag_mass3_141226_02 138.21 110.73 145140 17667 16548 13888 906.81 0 1159.2 31618 35274 28080 0 0 0 3181 543 3126 29962;29963;29964;29965;29966;29967;29968;29969;29970;29971;29972;29973;29974;29975;29976;29977;29978;29979;29980;29981 32970;32971;32972;32973;32974;32975;32976;32977;32978;32979;32980;32981;32982;32983;32984;32985;32986;32987;32988;32989;32990;32991;32992;32993;32994;32995 32993 25 YVELFLNSTAGASGGAYEHR Unmodified 2141.0178 0.017781914 199 P31943;G8JLB6;H0YB39 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 70.303 69.851 3 2.0112E-07 13113 Miao_Sh-H9_Flag_mass3_141226_01 75.215 63.776 0 0 0 0 0 0 0 0 0 0 0 0 0 3182 199 3127 29982 32996 32996 1 YVGVSSDSVGGFR Unmodified 1328.6361 0.63607935 571 Q14677;Q14677-2;Q14677-3 CLINT1 Clathrin interactor 1 yes no 0 0 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 1 1 1 1 1 1 1 1 61.295 60.174 2 0.0084287 7493 Miao_Sh-c_Flag_mass3_141226_02 61.11 41.12 6799.5 530.4 1296.1 0 300.4 977.99 0 0 755.3 0 1344.7 1303.2 291.37 3183 571 3128 29983;29984;29985;29986;29987;29988;29989;29990 32997 32997 1 YVIYIER Unmodified 954.51747 0.51746776 238 P61254;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;Q9UNX3;J3KTJ8;E5RIT6;J3KS10 RPL26;KRBA2;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 yes no 0 0 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 2 2 1 1 1 4 3 3 67.149 64.587 2 0.0077804 8017 Miao_Sh-c_Flag_mass3_141226_03 107.32 80.197 59219 2812.2 2498.4 0 4949.7 5218.1 5162.9 6034.3 5405.9 6111.3 11812 3417.3 5796.6 3184 238 3129 29991;29992;29993;29994;29995;29996;29997;29998;29999;30000;30001;30002;30003;30004;30005;30006;30007;30008;30009;30010;30011;30012 32998;32999;33000;33001;33002;33003;33004;33005;33006;33007;33008;33009;33010;33011;33012;33013;33014;33015;33016;33017;33018;33019 32999 22 YVVVTGITPTPLGEGK Unmodified 1629.8978 0.89777334 358 P11586;F5H2F4 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 1 70.605 70.655 2 5.2211E-09 20536 Miao_Sh-H9_proteinG_mass3_141226_01 97.291 79.626 0 0 0 0 0 0 0 0 0 0 0 0 0 3185 358 3130 30013 33020 33020 1 YYEVLGAAATTDYNNNHEGR Unmodified 2257.0036 0.0035884131 456 P46379;P46379-2;P46379-3;P46379-4;P46379-5;F6S6P2;X6REW1 BAG6 Large proline-rich protein BAG6 yes no 0 0 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 59.731 59.396 3 3.5463E-09 8095 Miao_Sh-c_Flag_mass3_141226_03 83.666 79.049 2460.9 0 194.1 0 0 0 0 1569.7 697.07 0 0 0 0 3186 456 3131 30014;30015;30016;30017 33021;33022 33021 2 YYPTEDVPR Unmodified 1138.5295 0.52948901 542 Q02878;F8VZ45;U3KQR5;F8VR69 RPL6 60S ribosomal protein L6 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 1 1 2 2 1 1 46.353 48.741 2 9.2213E-05 11628 Miao_Sh-H9_proteinG_mass3_141226_02 128 83.113 46921 1190.8 1112.7 850.02 0 1147.1 13373 0 0 0 9230.3 9750.5 10267 3187 542 3132 30018;30019;30020;30021;30022;30023;30024;30025;30026;30027;30028 33023;33024;33025;33026;33027;33028;33029;33030;33031;33032;33033;33034;33035;33036;33037;33038;33039;33040 33036 18 YYPTEDVPRK Unmodified 1266.6245 0.62445203 542 Q02878;F8VZ45;U3KQR5;F8VR69 RPL6 60S ribosomal protein L6 yes no 0 0 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 1 1 1 67.32 64.881 3 0.05268 22616 Miao_Sh-H9_proteinG_mass3_141226_02 58.699 46.171 1771 0 0 0 617.8 0 0 0 0 0 281.04 872.12 0 3188 542 3133 30029;30030;30031 33041 33041 0 YYTLFGR Unmodified 918.45995 0.45995289 340 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 66.555 67.267 2 0.031018 12347 Miao_Sh-H9_Flag_mass3_141226_01 81.381 50.713 2237.5 510 413.78 336.62 0 0 0 691.93 0 0 0 0 285.17 3189 340 3134 30032;30033;30034;30035;30036 33042 33042 1 YYVTIIDAPGHR Unmodified 1403.7197 0.7197494 527 P68104;Q5VTE0;A6PW80;Q5JR01 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 yes no 0 0 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 3 4 3 3 4 1 4 3 3 10 4 67.605 66.786 2;3 2.8606E-23 9258 Miao_Sh-c_proteinG_mass3_141226_01 167.11 143.4 153240 8791.4 0 8343 12606 21648 20258 14995 23455 19816 11054 5118.4 7157.2 3190 527 3135 30037;30038;30039;30040;30041;30042;30043;30044;30045;30046;30047;30048;30049;30050;30051;30052;30053;30054;30055;30056;30057;30058;30059;30060;30061;30062;30063;30064;30065;30066;30067;30068;30069;30070;30071;30072;30073;30074;30075;30076;30077;30078;30079;30080;30081;30082 33043;33044;33045;33046;33047;33048;33049;33050;33051;33052;33053;33054;33055;33056;33057;33058;33059;33060;33061;33062;33063;33064;33065;33066;33067;33068;33069;33070;33071;33072;33073;33074;33075;33076;33077;33078;33079;33080;33081;33082;33083;33084;33085;33086;33087;33088 33053 46