Sequence Length K Count R Count Modifications Modified sequence Oxidation (M) Probabilities Phospho (STY) Probabilities Oxidation (M) Score Diffs Phospho (STY) Score Diffs Acetyl (Protein N-term) Oxidation (M) Phospho (STY) Missed cleavages Proteins Leading proteins Leading razor protein Gene names Protein names Type Labeling State Raw file Experiment MS/MS m/z Charge m/z Mass Resolution Uncalibrated - Calibrated m/z [ppm] Uncalibrated - Calibrated m/z [Da] Mass error [ppm] Mass error [Da] Uncalibrated mass error [ppm] Uncalibrated mass error [Da] Max intensity m/z 0 Max intensity m/z 1 Retention time Retention length Calibrated retention time Calibrated retention time start Calibrated retention time finish Retention time calibration Match time difference Match m/z difference Match q-value Match score Number of data points Number of scans Number of isotopic peaks PIF Fraction of total spectrum Base peak fraction PEP MS/MS count MS/MS scan number Score Delta score Combinatorics Ratio H/L Ratio H/L normalized Ratio H/L shift Intensity Intensity L Intensity H Reverse Potential contaminant id Protein group IDs Peptide ID Mod. peptide ID MS/MS IDs Best MS/MS AIF MS/MS IDs Oxidation (M) site IDs Phospho (STY) site IDs AAAAAAAATMALAAPSSPTPESPTMLTK 28 1 0 2 Oxidation (M),2 Phospho (STY) _AAAAAAAATM(ox)ALAAPS(ph)SPTPES(ph)PTM(ox)LTK_ AAAAAAAATM(1)ALAAPSSPTPESPTM(1)LTK AAAAAAAAT(0.001)MALAAPS(0.435)S(0.435)PT(0.214)PES(0.641)PT(0.231)MLT(0.044)K AAAAAAAATM(61.52)ALAAPSSPTPESPTM(61.52)LTK AAAAAAAAT(-29.39)MALAAPS(0)S(0)PT(-4.47)PES(4.47)PT(-4.47)MLT(-11.76)K 0 2 2 0 Q9NQS7;B3KPD3;E9PM67 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 933.756 3 931.082548 2790.22581 62688.26 0.87793 0.00081743 -0.70465 -0.00065608 0.17329 0.00016135 931.416350536273 934.087722233059 104.54 0.91422 104.54 104.05 104.96 0 483 65 10 0 0 0 5.4052E-15 1 60558 61.522 55.089 21 1.5318 1.9203 0 59021000 24354000 34667000 0 1212 0 0 0 0 339;340 2416;2417;2418 AAAAAAALQAKSDEK 15 2 0 Phospho (STY) _AAAAAAALQAKS(ph)DEK_ AAAAAAALQAKS(1)DEK AAAAAAALQAKS(78.49)DEK 0 0 1 1 H3BM89;Q59GY2;P36578;B4DMJ6;H3BU31 H3BM89 H3BM89 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 748.3621 2 748.361245 1494.70794 71512.13 0.52003 0.00038917 0.33565 0.00025119 0.85568 0.00064036 748.361411832019 756.375653913124 52.973 0.76881 52.973 52.525 53.294 0 232 61 5 0 0 0 2.6347E-05 3 21900 78.486 73.207 1 0.70256 0.7489 0 9499300 4706300 4793000 1 866 1 1 1;2;3 1 1475 AAAAAATAPPSPGPAQPGPR 20 0 1 Phospho (STY) _AAAAAATAPPS(ph)PGPAQPGPR_ AAAAAAT(0.005)APPS(0.995)PGPAQPGPR AAAAAAT(-22.59)APPS(22.59)PGPAQPGPR 0 0 1 0 Q6SPF0 Q6SPF0 Q6SPF0 SAMD1 Atherin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 923.4481 2 918.443632 1834.87271 62801.54 0.46759 0.00042946 0.39357 0.00036147 0.86116 0.00079092 918.44407077027 923.448267725836 55.907 1.2907 55.907 55.278 56.569 0 824 104 11 0 0 0 1.0712E-54 4 24238 140.89 112.31 2 0.88786 1.1243 0 511290000 271680000 239610000 2 1126 2 2 4;5;6;7 5 2144 AAAAAATAPPSPGPAQPGPR 20 0 1 Phospho (STY) _AAAAAATAPPS(ph)PGPAQPGPR_ AAAAAAT(0.108)APPS(0.892)PGPAQPGPR AAAAAAT(-9.17)APPS(9.17)PGPAQPGPR 0 0 1 0 Q6SPF0 Q6SPF0 Q6SPF0 SAMD1 Atherin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 615.9678 3 612.631514 1834.87271 79547.42 0.61452 0.00037648 -0.06813 -4.1738E-05 0.54639 0.00033474 612.631405876805 615.967549920355 56.88 0.3697 56.88 56.579 56.949 -3.8147E-06 68 31 4 0 0 0 8.2563E-06 1 24785 51.029 47.368 2 0.6593 0.7597 0 12105000 7200000 4905100 3 1126 2 2 8 8 2144 AAAAAATAPPSPGPAQPGPR 20 0 1 Phospho (STY) _AAAAAATAPPS(ph)PGPAQPGPR_ AAAAAAT(0.069)APPS(0.931)PGPAQPGPR AAAAAAT(-11.31)APPS(11.31)PGPAQPGPR 0 0 1 0 Q6SPF0 Q6SPF0 Q6SPF0 SAMD1 Atherin MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 616.6102 3 612.631514 1834.87271 79711.23 0.55655 0.00034096 0.20731 0.000127 0.76386 0.00046796 612.631588946729 615.967709689676 57.151 0.53238 57.151 56.927 57.46 0 202 43 7 0 0 0 2.1833E-06 1 24967 52.169 52.169 2 0.90943 1.0885 0 17063000 10155000 6907900 4 1126 2 2 9 9 2144 AAAAAATAPPSPGPAQPGPR 20 0 1 Phospho (STY) _AAAAAATAPPS(ph)PGPAQPGPR_ AAAAAATAPPS(1)PGPAQPGPR AAAAAAT(-52.65)APPS(52.65)PGPAQPGPR 0 0 1 0 Q6SPF0 Q6SPF0 Q6SPF0 SAMD1 Atherin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 923.4485 2 918.443632 1834.87271 63592.78 1.1146 0.0010237 -0.13097 -0.00012029 0.98358 0.00090336 918.443770438751 923.447614079861 52.131 1.8762 52.131 51.32 53.196 0 1233 170 11 0 0 0 2.5653E-22 2 31781 105.17 92.19 2 1.5221 0.9923 0 457300000 180760000 276540000 5 1126 2 2 10;11 11 2144 AAAAPDSRVSEEENLK 16 1 1 Acetyl (Protein N-term),Phospho (STY) _(ac)AAAAPDS(ph)RVSEEENLK_ AAAAPDS(0.592)RVS(0.408)EEENLK AAAAPDS(1.62)RVS(-1.62)EEENLK 1 0 1 1 A0JLN3;Q9Y3B9 A0JLN3 A0JLN3 RRP15 RRP15-like protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 904.9072 2 904.906745 1807.79894 64756.55 0.75044 0.00067908 -0.079201 -7.167E-05 0.67124 0.00060741 904.906633138814 913.91796245124 67.732 0.80128 67.732 67.423 68.224 7.6294E-06 366 65 7 0 0 0 6.1366E-06 1 33175 71.344 60.065 2 0.51372 0.61513 0 123590000 78146000 45441000 6 394 3 3 12 12 673;674 AAAAPDSRVSEEENLKK 17 2 1 Acetyl (Protein N-term),Phospho (STY) _(ac)AAAAPDS(ph)RVSEEENLKK_ AAAAPDS(0.5)RVS(0.5)EEENLKK AAAAPDS(0)RVS(0)EEENLKK 1 0 1 2 A0JLN3;Q9Y3B9 A0JLN3 A0JLN3 RRP15 RRP15-like protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 646.3063 3 646.305243 1935.8939 75169.52 0.79705 0.00051514 0.060681 3.9219E-05 0.85773 0.00055436 646.305334275729 654.984479499947 62.359 0.58784 62.359 62.108 62.696 0 179 46 5 0 0 0 3.2839E-05 1 28973 51.348 31.257 2 0.48504 0.56731 0 25714000 13208000 12506000 7 394 4 4 13 13 673;674 AAAAPDSRVSEEENLKK 17 2 1 Acetyl (Protein N-term),Phospho (STY) _(ac)AAAAPDS(ph)RVSEEENLKK_ AAAAPDS(0.5)RVS(0.5)EEENLKK AAAAPDS(0)RVS(0)EEENLKK 1 0 1 2 A0JLN3;Q9Y3B9 A0JLN3 A0JLN3 RRP15 RRP15-like protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 646.3057 3 646.305243 1935.8939 74975.34 1.1539 0.00074579 0.017597 1.1373E-05 1.1715 0.00075717 646.305186287884 654.984113607629 50.197 1.2046 50.197 49.539 50.743 0 520 114 6 0 0 0 0.00020351 1 30508 41.615 28.944 2 0.83276 0.68499 0 59499000 32875000 26624000 8 394 4 4 14 14 673;674 AAATGNASPGKLEHSK 16 2 0 Phospho (STY) _AAATGNAS(ph)PGKLEHSK_ AAAT(0.001)GNAS(0.969)PGKLEHS(0.029)K AAAT(-28.86)GNAS(15.19)PGKLEHS(-15.19)K 0 0 1 1 Q8NB78;H0Y6H0 Q8NB78 Q8NB78 KDM1B Lysine-specific histone demethylase 1B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 540.2582 3 540.257676 1617.7512 81707.96 0.58917 0.0003183 0.48232 0.00026058 1.0715 0.00057888 540.257997314964 545.600651538113 19.808 0.35155 19.808 19.621 19.973 0 94 16 9 0 0 0 1.0335E-06 2 6747 74.776 62.283 3 0.87869 0.6941 0 33359000 17075000 16284000 9 1156 5 5 15;16 16 2228 AAAVAAAGAGEPQSPDELLPK 21 1 0 Acetyl (Protein N-term),Phospho (STY) _(ac)AAAVAAAGAGEPQS(ph)PDELLPK_ AAAVAAAGAGEPQS(1)PDELLPK AAAVAAAGAGEPQS(46.59)PDELLPK 1 0 1 0 Q549C5;Q53GB0;Q9NS69 Q549C5 Q549C5 MST065;TOMM22 Mitochondrial import receptor subunit TOM22 homolog MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1047.0076 2 1042.99863 2083.98272 NaN NaN NaN NaN NaN NaN NaN NaN NaN 127.57 1 127.57 127.07 128.07 0 0 0 0 0.00037806 1 77423 46.592 40.986 1 10 1089 6 6 17 17 2053 AADGGERPLAASPPGTVK 18 1 1 Phospho (STY) _AADGGERPLAAS(ph)PPGTVK_ AADGGERPLAAS(0.906)PPGT(0.094)VK AADGGERPLAAS(9.84)PPGT(-9.84)VK 0 0 1 1 B9EGQ5;M0QXA7;O95785;B3KR89 B9EGQ5 B9EGQ5 WIZ Protein Wiz MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 592.2902 3 591.955886 1772.84583 78925.79 0.33783 0.00019998 -0.13652 -8.0816E-05 0.2013 0.00011916 592.289688514301 597.963463863967 68.698 1.3342 68.698 68.138 69.473 0 239 128 4 0 0 0 0.0001598 1 34037 42.384 33.014 2 0.46837 0.54519 0 31205000 21237000 9968200 11 731 7 7 18 18 1206 AADGGERPLAASPPGTVK 18 1 1 Phospho (STY) _AADGGERPLAAS(ph)PPGTVK_ AADGGERPLAAS(0.923)PPGT(0.077)VK AADGGERPLAAS(10.78)PPGT(-10.78)VK 0 0 1 1 B9EGQ5;M0QXA7;O95785;B3KR89 B9EGQ5 B9EGQ5 WIZ Protein Wiz MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 597.9638 3 591.955886 1772.84583 78201.7 1.0337 0.00061192 0.020549 1.2164E-05 1.0543 0.00062408 591.955992962367 597.963407768678 54.915 1.5122 54.915 54.123 55.635 -3.8147E-06 865 131 8 0 0 0 0.00023471 1 33757 40.622 35.365 2 1.4858 1.1466 0 84655000 35989000 48666000 12 731 7 7 19 19 1206 AADISLDNLVEGK 13 1 0 Phospho (STY) _AADIS(ph)LDNLVEGK_ AADIS(1)LDNLVEGK AADIS(69.72)LDNLVEGK 0 0 1 0 B7Z3E7;A6NNK5;Q12888;H7BZY0;B3KVT9 B7Z3E7 B7Z3E7 TP53BP1 Tumor suppressor p53-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 716.8449 2 712.837072 1423.65959 74460.19 0.80267 0.00057217 0.056092 3.9984E-05 0.85876 0.00061216 712.837076754197 716.843899407826 113.82 0.5853 113.82 113.48 114.07 0 165 50 5 0 0 0 0.0019071 1 67647 69.716 59.193 1 0.86202 1.033 0 14400000 7829900 6570200 13 430 8 8 20 20 742 AADKSPESQNLIDGTK 16 2 0 Phospho (STY) _AADKS(ph)PESQNLIDGTK_ AADKS(0.992)PES(0.008)QNLIDGT(0.001)K AADKS(21.13)PES(-21.13)QNLIDGT(-32.37)K 0 0 1 1 B3KXW2;A0A024R283;Q9HCE3 B3KXW2 B3KXW2 ZNF532 Zinc finger protein 532 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 885.9208 2 877.403838 1752.79312 66162.34 0.597 0.00052381 0.20518 0.00018003 0.80219 0.00070384 877.403867555413 885.418450480137 64.8 0.48872 64.8 64.495 64.984 0 151 35 6 0 0 0 0.0004117 1 30837 43.914 35.843 3 0.3309 0.41775 0 60194000 43266000 16928000 14 61 9 9 21 21 80 AADKSPESQNLIDGTK 16 2 0 Phospho (STY) _AADKS(ph)PESQNLIDGTK_ AADKS(0.999)PES(0.001)QNLIDGTK AADKS(28.52)PES(-28.52)QNLIDGT(-65)K 0 0 1 1 B3KXW2;A0A024R283;Q9HCE3 B3KXW2 B3KXW2 ZNF532 Zinc finger protein 532 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 877.4047 2 877.403838 1752.79312 64611.54 1.0065 0.0008831 -0.14094 -0.00012366 0.86556 0.00075945 877.403893217222 885.417748897215 42.104 1.2241 42.104 41.429 42.653 0 650 106 8 0 0 0 2.4192E-09 1 24491 86.453 74.168 3 1.2233 0.91832 0 76909000 34513000 42396000 15 61 9 9 22 22 80 AADTEEMDIEMDSGDEA 17 0 0 2 Oxidation (M),Phospho (STY) _AADTEEM(ox)DIEM(ox)DS(ph)GDEA_ AADTEEM(1)DIEM(1)DSGDEA AADTEEMDIEMDS(1)GDEA AADTEEM(129.54)DIEM(129.54)DSGDEA AADT(-95.11)EEMDIEMDS(95.11)GDEA 0 2 1 0 Q9UBB5;Q69YZ5;O60535 Q9UBB5 Q9UBB5 MBD2;DKFZp586O0821;NY-CO-41 Methyl-CpG-binding domain protein 2 MSMS -1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 970.819 2 970.818483 1939.62241 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.943 1 49.943 49.443 50.443 0 0 0 0 1.7786E-19 1 20020 129.54 116.12 2 16 1226 10 10 23 23 352;353 2489 AADVSVTHRPPLSPK 15 1 1 Acetyl (Protein N-term),Phospho (STY) _(ac)AADVSVTHRPPLS(ph)PK_ AADVS(0.002)VT(0.05)HRPPLS(0.948)PK AADVS(-27.48)VT(-12.76)HRPPLS(12.76)PK 1 0 1 1 A0A087WZ13;Q8IY67 A0A087WZ13 A0A087WZ13 RAVER1 Ribonucleoprotein PTB-binding 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 566.2851 3 566.285455 1695.83453 81929.68 0.25142 0.00014237 0.14321 8.1099E-05 0.39463 0.00022347 566.285351506963 572.293023553635 83.291 1.0069 83.291 82.863 83.87 0 229 93 4 0 0 0 3.4863E-05 1 44908 75.239 65.833 3 0.99709 1.1667 0 35947000 15548000 20398000 17 265 11 11 24 24 424 AADVSVTHRPPLSPK 15 1 1 Acetyl (Protein N-term),Phospho (STY) _(ac)AADVSVTHRPPLS(ph)PK_ AADVS(0.097)VT(0.341)HRPPLS(0.562)PK AADVS(-7.64)VT(-2.17)HRPPLS(2.17)PK 1 0 1 1 A0A087WZ13;Q8IY67 A0A087WZ13 A0A087WZ13 RAVER1 Ribonucleoprotein PTB-binding 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 566.2853 3 566.285455 1695.83453 NaN NaN NaN 0.1779 0.00010074 NaN NaN NaN NaN 83.146 0.42333 83.146 82.83 83.254 0 0 0 0 0.0014515 1 44342 41.513 23.149 3 NaN NaN 0 12921000 12921000 0 18 265 11 11 25 25 424 AAESSSDSSDSDSSEDDEAPSKPAGTTK 28 2 0 Unmodified _AAESSSDSSDSDSSEDDEAPSKPAGTTK_ 0 0 0 1 B2RAU8;A0A0A0MRM9;Q14978;Q96J17 B2RAU8 B2RAU8 NOLC1 Nucleolar and coiled-body phosphoprotein 1 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 920.72 3 920.047958 2757.12204 NaN NaN NaN -1.5805 -0.0014541 NaN NaN NaN NaN 16.935 0.21341 16.935 16.81 17.023 0 0 0 0 0.0061329 1 4217 32.434 24.901 1 NaN NaN 0 1925100 1925100 0 19 287 12 12 26 26 AAGPASPPEEDPER 14 0 1 Phospho (STY) _AAGPAS(ph)PPEEDPER_ AAGPAS(1)PPEEDPER AAGPAS(114.64)PPEEDPER 0 0 1 0 Q96KM6 Q96KM6 Q96KM6 ZNF512B Zinc finger protein 512B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 756.8163 2 751.811585 1501.60862 70111.11 0.87398 0.00065707 -0.1758 -0.00013217 0.69818 0.0005249 751.81150855182 756.815602093438 45.757 1.527 45.757 45.064 46.591 0 753 113 11 0 0 0 1.2109E-17 3 17431 114.64 99.954 1 0.75761 0.95659 0 100680000 57228000 43448000 20 1183 13 13 27;28;29 28 2331 AAGPASPPEEDPER 14 0 1 Phospho (STY) _AAGPAS(ph)PPEEDPER_ AAGPAS(1)PPEEDPER AAGPAS(67.41)PPEEDPER 0 0 1 0 Q96KM6 Q96KM6 Q96KM6 ZNF512B Zinc finger protein 512B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 751.8121 2 751.811585 1501.60862 70259.25 0.86503 0.00065034 0.29346 0.00022063 1.1585 0.00087097 751.811927390005 756.816004152938 38.309 1.5348 38.309 37.586 39.121 0 1061 137 10 0 0 0 0.0014973 4 21660 67.415 55.908 1 1.8949 1.2441 0 322500000 110240000 212260000 21 1183 13 13 30;31;32;33 30 2331 AAGPASPPEEDPERTK 16 1 1 Phospho (STY) _AAGPAS(ph)PPEEDPERTK_ AAGPAS(1)PPEEDPERTK AAGPAS(40.18)PPEEDPERT(-40.18)K 0 0 1 1 Q96KM6 Q96KM6 Q96KM6 ZNF512B Zinc finger protein 512B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 866.384 2 866.382906 1730.75126 64681.16 0.83979 0.00072758 0.31655 0.00027426 1.1563 0.0010018 866.38320714803 875.394625586629 28.691 0.84595 28.691 28.236 29.082 0 343 59 8 0 0 0 0.00016607 1 14296 51.03 39.925 2 1.8876 1.455 0 42509000 15328000 27182000 22 1183 14 14 34 34 2331 AALAPAKESPRK 12 2 1 Phospho (STY) _AALAPAKES(ph)PRK_ AALAPAKES(1)PRK AALAPAKES(106.3)PRK 0 0 1 2 J3KQ96;E7ETY2;Q13428;B4DRA2;Q59FZ2;B4DLB1;H0YAB7 J3KQ96 J3KQ96 TCOF1 Treacle protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 440.5685 3 440.234143 1317.6806 89492.17 0.27374 0.00012051 -0.32938 -0.000145 -0.05564 -2.4494E-05 440.233942018096 448.912849390065 60.877 0.3466 60.877 60.747 61.094 0 136 23 8 0 0 0 4.2064E-10 1 27822 106.3 95.642 1 0.77499 0.91525 0 161390000 91772000 69614000 23 792 15 15 35 35 1344 AALAPAKESPRK 12 2 1 Phospho (STY) _AALAPAKES(ph)PRK_ AALAPAKES(1)PRK AALAPAKES(110.84)PRK 0 0 1 2 J3KQ96;E7ETY2;Q13428;B4DRA2;Q59FZ2;B4DLB1;H0YAB7 J3KQ96 J3KQ96 TCOF1 Treacle protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 440.2333 3 440.234143 1317.6806 88830.3 0.24441 0.0001076 -0.715 -0.00031477 -0.47058 -0.00020717 440.233914991216 448.912695335504 17.009 0.34926 17.009 16.833 17.182 0 61 12 10 0 0 0 4.0378E-14 2 4261 110.84 100.2 1 2.1251 1.7463 0 63308000 20283000 43025000 24 792 15 15 36;37 37 1344 AALAPAKESPRK 12 2 1 Phospho (STY) _AALAPAKES(ph)PRK_ AALAPAKES(1)PRK AALAPAKES(59.18)PRK 0 0 1 2 J3KQ96;E7ETY2;Q13428;B4DRA2;Q59FZ2;B4DLB1;H0YAB7 J3KQ96 J3KQ96 TCOF1 Treacle protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 659.8478 2 659.847577 1317.6806 74444.38 1.0476 0.00069128 -0.43347 -0.00028603 0.61416 0.00040525 659.847114527176 672.865737513928 17.01 0.24746 17.01 16.877 17.124 0 42 8 8 0 0 0 0.0030419 1 4283 59.185 45.066 1 2.1221 1.7689 0 25529000 7917200 17612000 25 792 15 15 38 38 1344 AALEPKESRSPQQSAALPR 19 1 2 2 Phospho (STY) _AALEPKES(ph)RS(ph)PQQSAALPR_ AALEPKES(0.997)RS(0.995)PQQS(0.009)AALPR AALEPKES(24.65)RS(22.76)PQQS(-22.76)AALPR 0 0 2 2 A0A0A6YYG7;Q6IBW4;E5RJN3 A0A0A6YYG7 A0A0A6YYG7 NCAPH2 Condensin-2 complex subunit H2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 742.0223 3 732.678514 2195.01371 71896.5 0.8179 0.00059926 -0.17009 -0.00012462 0.64781 0.00047464 733.012594415513 742.022030104739 70.289 1.024 70.289 69.839 70.863 7.6294E-06 735 98 10 0 0 0 8.5184E-05 1 35323 42.746 28.286 3 1.2348 1.4627 0 223840000 99057000 124780000 26 301 16 16 39 39 480;481 AALLKASPK 9 2 0 Phospho (STY) _AALLKAS(ph)PK_ AALLKAS(1)PK AALLKAS(46.8)PK 0 0 1 1 A8K7N0;Q6IPH7;P50914;A8K3Q9 A8K7N0 A8K7N0 RPL14 60S ribosomal protein L14 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 489.7734 2 489.772818 977.531083 89831.42 0.58112 0.00028462 0.21725 0.0001064 0.79836 0.00039102 489.772896918019 497.787207831292 31.996 0.39449 31.996 31.763 32.158 0 91 28 4 0 0 0 0.014889 2 17146 46.796 39.151 1 1.6199 1.3993 0 4384500 2271000 2113500 27 489 17 17 40;41 41 844 AALRPLVKPK 10 2 1 Unmodified _AALRPLVKPK_ 0 0 0 2 D3YTB1;A0A024R2G7;F8W727;P62910;D3YTI8 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 373.5922 3 364.913243 1091.7179 99517.42 -0.10326 -3.7682E-05 0.0092449 3.3736E-06 -0.094019 -3.4309E-05 364.913082371031 373.592054614104 109.56 0.32753 109.56 109.39 109.72 0 67 22 6 0 0 0 0.027839 1 64447 23.836 20.135 1 0.98045 1.1473 0 28034000 14960000 13073000 28 64 18 18 42 42 AALVMDLIDLTPR 13 0 1 Oxidation (M),Phospho (STY) _AALVM(ox)DLIDLT(ph)PR_ AALVM(1)DLIDLTPR AALVMDLIDLT(1)PR AALVM(77.53)DLIDLTPR AALVMDLIDLT(77.53)PR 0 1 1 0 B2RWP5;Q96L73;Q9H6H8;Q658U6;Q9H6B5;A0A1D8GZ55;A0A1D8GZ56 B2RWP5 B2RWP5 NSD1;DKFZp666C163 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 762.3807 2 762.380592 1522.74663 NaN NaN NaN -0.48932 -0.00037305 NaN NaN NaN NaN 129.23 0.35233 129.23 129.06 129.41 0 0 0 0 0.00071002 1 78557 77.527 62.496 1 NaN NaN 0 2023200 2023200 0 29 565 19 19 43 43 144 2767 AALVMDLIDLTPR 13 0 1 Oxidation (M),Phospho (STY) _AALVM(ox)DLIDLT(ph)PR_ AALVM(1)DLIDLTPR AALVMDLIDLT(1)PR AALVM(59.25)DLIDLTPR AALVMDLIDLT(59.25)PR 0 1 1 0 B2RWP5;Q96L73;Q9H6H8;Q658U6;Q9H6B5;A0A1D8GZ55;A0A1D8GZ56 B2RWP5 B2RWP5 NSD1;DKFZp666C163 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 767.8871 2 762.380592 1522.74663 NaN NaN NaN 0.59252 0.00045172 NaN NaN NaN NaN 129.61 0.17052 129.61 129.49 129.66 0 0 0 0 0.0012814 1 78822 59.248 46.047 1 NaN NaN 0 1579900 0 1579900 30 565 19 19 44 44 144 2767 AALVMDLIDLTPR 13 0 1 Oxidation (M),Phospho (STY) _AALVM(ox)DLIDLT(ph)PR_ AALVM(1)DLIDLTPR AALVMDLIDLT(1)PR AALVM(41.4)DLIDLTPR AALVMDLIDLT(41.4)PR 0 1 1 0 B2RWP5;Q96L73;Q9H6H8;Q658U6;Q9H6B5;A0A1D8GZ55;A0A1D8GZ56 B2RWP5 B2RWP5 NSD1;DKFZp666C163 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 767.3859 2 762.380592 1522.74663 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.28 1 129.28 128.78 129.78 0 0 0 0 0.0063282 1 78571 41.399 27.047 1 31 565 19 19 45 45 144 2767 AAMYDIISSPSK 12 1 0 Oxidation (M),Phospho (STY) _AAM(ox)YDIISS(ph)PSK_ AAM(1)YDIISSPSK AAMYDIIS(0.23)S(0.54)PS(0.23)K AAM(122.97)YDIISSPSK AAMY(-92.35)DIIS(-3.71)S(3.71)PS(-3.71)K 0 1 1 0 Q6IEH8;Q6KC79;A8K2T2;A6QL62 Q6IEH8 Q6IEH8 NIPBL Nipped-B-like protein ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 693.8092 2 689.801643 1377.58873 NaN NaN NaN -0.052767 -3.6399E-05 NaN NaN NaN NaN 77.277 0.95506 77.277 76.781 77.736 0 0 0 0 2.4958E-24 2 40041 122.97 96.259 4 NaN NaN 0 14624000 0 14624000 32 1118 20 20 46;47 47 314 2117;2118 AAMYDIISSPSK 12 1 0 Oxidation (M),Phospho (STY) _AAM(ox)YDIISS(ph)PSK_ AAM(1)YDIISSPSK AAMYDIIS(0.241)S(0.697)PS(0.062)K AAM(133.16)YDIISSPSK AAMY(-107.77)DIIS(-4.62)S(4.62)PS(-10.52)K 0 1 1 0 Q6IEH8;Q6KC79;A8K2T2;A6QL62 Q6IEH8 Q6IEH8 NIPBL Nipped-B-like protein MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 689.8025 2 689.801643 1377.58873 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.968 1 76.968 76.468 77.468 7.6294E-06 0 0 0 1.8512E-13 1 40013 133.16 115.02 4 33 1118 20 20 48 48 314 2117;2118 AAMYDIISSPSK 12 1 0 Oxidation (M),Phospho (STY) _AAM(ox)YDIIS(ph)SPSK_ AAM(1)YDIISSPSK AAMYDIIS(0.789)S(0.178)PS(0.033)K AAM(109)YDIISSPSK AAMY(-70.69)DIIS(6.48)S(-6.48)PS(-13.73)K 0 1 1 0 Q6IEH8;Q6KC79;A8K2T2;A6QL62 Q6IEH8 Q6IEH8 NIPBL Nipped-B-like protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 690.3036 2 689.801643 1377.58873 72150.45 1.1172 0.00077063 -0.048429 -3.3406E-05 1.0687 0.00073722 689.801697859034 693.808655242869 77.846 1.2483 77.846 77.13 78.378 0 422 114 5 0 0 0 3.8407E-10 1 49612 109 85.771 4 1.0126 0.77481 0 17256000 7166000 10090000 34 1118 20 20 49 49 314 2117;2118 AAQDRDQIYR 10 0 2 Unmodified _AAQDRDQIYR_ 0 0 0 1 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995;H7C2L4 Q8N1H4 Q8N1H4 DKFZp686F18120;TRA2B Transformer-2 protein homolog beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 412.5425 3 412.542426 1234.60545 92911.23 -0.092916 -3.8332E-05 -0.031556 -1.3018E-05 -0.12447 -5.135E-05 412.542485012217 419.214492268359 66.447 0.41876 66.447 66.268 66.687 0 153 28 8 0 0 0 3.085E-21 2 32328 147.95 113.41 1 1.1758 1.4683 0 212410000 94795000 117610000 35 556 21 21 50;51 51 AAQDRDQIYR 10 0 2 Unmodified _AAQDRDQIYR_ 0 0 0 1 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995;H7C2L4 Q8N1H4 Q8N1H4 DKFZp686F18120;TRA2B Transformer-2 protein homolog beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 628.3193 2 618.31 1234.60545 77913.11 0.47104 0.00029125 0.18273 0.00011298 0.65377 0.00040423 618.310079396783 628.318404655449 66.444 0.25536 66.444 66.323 66.578 0 60 17 5 0 0 0 0.01111 1 32333 76.465 57.685 1 1.1323 1.4036 0 36733000 17234000 19498000 36 556 21 21 52 52 AASADSTTEGTPADGFTVLSTK 22 1 0 Unmodified _AASADSTTEGTPADGFTVLSTK_ 0 0 0 0 O75367 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1068.5195 2 1064.00804 2126.00152 61864.35 1.2445 0.0013241 0.095197 0.00010129 1.3397 0.0014254 1064.50945502995 1068.51689910247 99.929 0.66097 99.929 99.573 100.23 0 135 53 4 0 0 0 0.007154 1 56983 30.956 17.975 1 1.2815 1.5931 0 25035000 9941500 15094000 37 935 22 22 53 53 AASADSTTEGTPADGFTVLSTK 22 1 0 Phospho (STY) _AAS(ph)ADSTTEGTPADGFTVLSTK_ AAS(0.922)ADS(0.035)T(0.035)T(0.007)EGTPADGFTVLSTK AAS(14.16)ADS(-14.16)T(-14.16)T(-20.95)EGT(-40.05)PADGFT(-65.86)VLS(-77.19)T(-80.03)K 0 0 1 0 O75367 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1108.5007 2 1103.9912 2205.96785 57802.85 1.5271 0.0016859 1.0838 0.0011965 2.6109 0.0028824 1104.49385852704 1108.00065690112 100.21 0.87679 100.21 99.755 100.63 0 283 68 6 0 0 0 1.2188E-18 2 57650 84.249 71.622 8 1.1553 1.4531 0 28929000 17543000 11386000 38 935 22 23 54;55 55 1601;1602;2851;2852;2853 AASADSTTEGTPADGFTVLSTK 22 1 0 Phospho (STY) _AASADSTTEGT(ph)PADGFTVLSTK_ AASADSTTEGT(0.999)PADGFTVLSTK AAS(-70.88)ADS(-51.81)T(-34.54)T(-37.18)EGT(34.54)PADGFT(-55.47)VLS(-76.83)T(-83.84)K 0 0 1 0 O75367 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1108.5004 2 1103.9912 2205.96785 58005.52 1.0999 0.0012143 -0.086672 -9.5685E-05 1.0132 0.0011186 1104.49260204368 1108.49934753008 101.22 1.7207 101.22 100.5 102.22 0 1035 139 12 0 0 0 6.6099E-143 3 58267 197.72 183.04 8 1.0472 1.2946 0 363820000 181320000 182500000 39 935 22 23 56;57;58 57 1601;1602;2851;2852;2853 AASADSTTEGTPADGFTVLSTK 22 1 0 Phospho (STY) _AASADS(ph)TTEGTPADGFTVLSTK_ AAS(0.071)ADS(0.458)T(0.381)T(0.09)EGT(0.001)PADGFTVLSTK AAS(-8.1)ADS(0.8)T(-0.8)T(-7.08)EGT(-26.08)PADGFT(-58.65)VLS(-71.38)T(-74.08)K 0 0 1 0 O75367 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1103.9926 2 1103.9912 2205.96785 58554.45 0.51581 0.00056945 0.12752 0.00014078 0.64333 0.00071023 1104.49298311605 1107.99878286083 104.29 1.3456 104.29 103.61 104.96 7.6294E-06 610 96 8 0 0 0 1.4962E-18 2 60152 82.609 70.551 8 1.2774 1.6027 0 57240000 26644000 30595000 40 935 22 23 59;60 59 1601;1602;2851;2852;2853 AASADSTTEGTPADGFTVLSTK 22 1 0 Phospho (STY) _AAS(ph)ADSTTEGTPADGFTVLSTK_ AAS(1)ADSTTEGTPADGFTVLSTK AAS(37.23)ADS(-37.23)T(-54.2)T(-85.13)EGT(-149.79)PADGFT(-196.73)VLS(-211.7)T(-216.56)K 0 0 1 0 O75367 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1104.4923 2 1103.9912 2205.96785 57550.01 0.66378 0.00073281 -0.05708 -6.3015E-05 0.6067 0.00066979 1104.49269070784 1108.49955365443 105.8 1.3971 105.8 105.27 106.66 7.6294E-06 856 93 12 0 0 0 7.4747E-228 3 61804 241.52 222.45 8 1.1986 1.4798 0 683160000 305410000 377750000 41 935 22 23 61;62;63 63 1601;1602;2851;2852;2853 AASADSTTEGTPADGFTVLSTK 22 1 0 Phospho (STY) _AAS(ph)ADSTTEGTPADGFTVLSTK_ AAS(0.333)ADS(0.333)T(0.333)T(0.002)EGTPADGFTVLSTK AAS(0)ADS(0)T(0)T(-22.64)EGT(-64.61)PADGFT(-97.04)VLS(-104.11)T(-105.59)K 0 0 1 0 O75367 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1108.4995 2 1103.9912 2205.96785 58021.76 0.81636 0.00090126 -0.17002 -0.0001877 0.64634 0.00071355 1104.49259369542 1107.99817770064 111.92 0.96394 111.92 111.31 112.28 0 944 95 14 0 0 0 1.1172E-29 2 72133 107.72 96.11 8 1.3928 0.92826 0 941310000 394950000 546360000 42 935 22 23 64;65 65 1601;1602;2851;2852;2853 AASADSTTEGTPADGFTVLSTK 22 1 0 Phospho (STY) _AAS(ph)ADSTTEGTPADGFTVLSTK_ AAS(0.949)ADS(0.042)T(0.009)TEGTPADGFTVLSTK AAS(13.53)ADS(-13.53)T(-20.19)T(-42.07)EGT(-86.01)PADGFT(-107.51)VLS(-118.01)T(-118.06)K 0 0 1 0 O75367 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1104.4935 2 1103.9912 2205.96785 58021.77 0.81147 0.00089585 -0.059978 -6.6215E-05 0.75149 0.00082964 1104.49266579722 1107.99830369236 112.49 1.1217 112.49 112.22 113.34 0 952 107 12 0 0 0 9.3925E-37 1 72269 118.37 109.55 8 1.0504 0.7005 0 648890000 309950000 338930000 43 935 22 23 66 66 1601;1602;2851;2852;2853 AASADSTTEGTPADGFTVLSTK 22 1 0 2 Phospho (STY) _AAS(ph)ADS(ph)TTEGTPADGFTVLSTK_ AAS(0.996)ADS(0.761)T(0.131)T(0.111)EGT(0.001)PADGFTVLSTK AAS(28.76)ADS(7.72)T(-7.72)T(-8.45)EGT(-34.84)PADGFT(-59.73)VLS(-71.43)T(-75.31)K 0 0 2 0 O75367 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1148.4827 2 1143.97437 2285.93418 56360.97 0.17098 0.0001956 7.6598E-05 8.7626E-08 0.17106 0.00019569 1144.47629564897 1148.48232943293 114.65 1.8404 114.65 113.56 115.4 0 908 160 10 0 0 0 1.213E-15 2 68525 81.016 74.329 28 1.4482 1.7865 0 994630000 409010000 585620000 44 935 22 24 67;68 68 1601;1602;2851;2852;2853 AASADSTTEGTPADGFTVLSTK 22 1 0 2 Phospho (STY) _AASADS(ph)TTEGT(ph)PADGFTVLSTK_ AAS(0.293)ADS(0.66)T(0.028)T(0.032)EGT(0.987)PADGFTVLSTK AAS(-3.59)ADS(3.59)T(-14.84)T(-14.01)EGT(24.41)PADGFT(-44.26)VLS(-62.17)T(-68.44)K 0 0 2 0 O75367 O75367 O75367 H2AFY Core histone macro-H2A.1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1144.4774 2 1143.97437 2285.93418 NaN NaN NaN 0.08251 9.4389E-05 NaN NaN NaN NaN 109.57 1.3727 109.57 108.73 110.11 0 0 0 0 3.7887E-27 1 64386 99.092 78.63 28 NaN NaN 0 106830000 106830000 0 45 935 22 24 69 69 1601;1602;2851;2852;2853 AASADSTTEGTPADGFTVLSTK 22 1 0 2 Phospho (STY) _AASADS(ph)TTEGT(ph)PADGFTVLSTK_ AAS(0.047)ADS(0.76)T(0.186)T(0.008)EGT(1)PADGFTVLSTK AAS(-12.12)ADS(6.11)T(-6.11)T(-20.1)EGT(36.89)PADGFT(-36.89)VLS(-57.16)T(-62.46)K 0 0 2 0 O75367 O75367 O75367 H2AFY Core histone macro-H2A.1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1148.4811 2 1143.97437 2285.93418 NaN NaN NaN -2.0556 -0.0023515 NaN NaN NaN NaN 109.55 1.741 109.55 108.42 110.16 -7.6294E-06 0 0 0 1.4088E-37 1 64702 114.55 94.813 28 NaN NaN 0 159740000 0 159740000 46 935 22 24 70 70 1601;1602;2851;2852;2853 AASADSTTEGTPADGFTVLSTK 22 1 0 2 Phospho (STY) _AASADST(ph)TEGT(ph)PADGFTVLSTK_ AAS(0.053)ADS(0.375)T(0.443)T(0.132)EGT(0.996)PADGFT(0.001)VLSTK AAS(-9.31)ADS(-0.73)T(0.73)T(-5.29)EGT(28.16)PADGFT(-29.95)VLS(-43.46)T(-47.39)K 0 0 2 0 O75367 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1148.4823 2 1143.97437 2285.93418 56337.62 0.71712 0.00082037 -1.011 -0.0011566 -0.2939 -0.00033621 1144.47493501998 1148.48150236099 119.28 1.6561 119.28 118.73 120.38 7.6294E-06 940 144 12 0 0 0 8.1921E-13 1 76790 65.149 60.071 28 1.3944 0.93184 0 180020000 76687000 103340000 47 935 22 24 71 71 1601;1602;2851;2852;2853 AASADSTTEGTPADGFTVLSTK 22 1 0 2 Phospho (STY) _AASADS(ph)T(ph)TEGTPADGFTVLSTK_ AAS(0.355)ADS(0.546)T(0.546)T(0.546)EGT(0.006)PADGFTVLSTK AAS(-2.59)ADS(0)T(0)T(0)EGT(-21.48)PADGFT(-46.91)VLS(-53.8)T(-53.83)K 0 0 2 0 O75367 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1148.4839 2 1143.97437 2285.93418 56256.01 0.67698 0.00077445 -0.16161 -0.00018488 0.51537 0.00058957 1143.97395388271 1147.98136740132 122.09 1.1452 122.09 121.41 122.55 7.6294E-06 726 105 10 0 0 0 8.2049E-09 1 78949 55.755 51.964 28 1.5887 1.0621 0 125760000 46084000 79671000 48 935 22 24 72 72 1601;1602;2851;2852;2853 AASADSTTEGTPADGFTVLSTK 22 1 0 2 Phospho (STY) _AAS(ph)ADS(ph)TTEGTPADGFTVLSTK_ AAS(0.882)ADS(0.5)T(0.5)T(0.118)EGTPADGFTVLSTK AAS(6.85)ADS(0)T(0)T(-6.85)EGT(-36.84)PADGFT(-63.93)VLS(-75.69)T(-75.5)K 0 0 2 0 O75367 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1144.4764 2 1143.97437 2285.93418 56247.31 0.61536 0.00070395 -0.10653 -0.00012187 0.50883 0.00058209 1144.47615157784 1148.48210301341 124.54 2.3005 124.54 123.76 126.06 -7.6294E-06 1454 216 13 0 0 0 6.3005E-19 2 80721 86.497 79.045 28 1.4245 0.94901 0 1212800000 509880000 702930000 49 935 22 24 73;74 74 1601;1602;2851;2852;2853 AASADSTTEGTPADGFTVLSTK 22 1 0 3 Phospho (STY) _AASADS(ph)T(ph)TEGT(ph)PADGFTVLSTK_ AAS(0.034)ADS(0.833)T(0.583)T(0.583)EGT(0.967)PADGFT(0.001)VLSTK AAS(-14.67)ADS(4.58)T(0)T(0)EGT(11.24)PADGFT(-29.28)VLS(-43.93)T(-47.98)K 0 0 3 0 O75367 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1184.4598 2 1183.95753 2365.90051 56480.44 0.37399 0.00044279 -0.053582 -6.3439E-05 0.32041 0.00037935 1184.45902683936 1188.46546596012 117.71 0.89745 117.71 117.35 118.25 7.6294E-06 514 79 8 0 0 0 9.8512E-14 2 70535 71.894 66.815 56 1.2725 1.5881 0 68945000 31121000 37824000 50 935 22 25 75;76 76 1601;1602;2851;2852;2853 AASADSTTEGTPADGFTVLSTK 22 1 0 3 Phospho (STY) _AAS(ph)ADS(ph)T(ph)TEGTPADGFTVLSTK_ AAS(0.905)ADS(0.683)T(0.683)T(0.683)EGT(0.044)PADGFTVLSTK AAS(6.17)ADS(0)T(0)T(0)EGT(-15.77)PADGFT(-48.23)VLS(-66.12)T(-69.15)K 0 0 3 0 O75367 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1183.9586 2 1183.95753 2365.90051 56186.7 0.2514 0.00029765 -0.14183 -0.00016792 0.10957 0.00012973 1184.45887518754 1188.46587987333 123.01 1.2005 123.01 122.57 123.77 0 864 103 12 0 0 0 1.6306E-13 4 74193 72.417 68.466 56 1.5668 1.9373 0 346210000 136220000 209990000 51 935 22 25 77;78;79;80 77 1601;1602;2851;2852;2853 AASDPLLSSVSPAVSK 16 1 0 Phospho (STY) _AASDPLLSSVS(ph)PAVSK_ AASDPLLSS(0.019)VS(0.979)PAVS(0.002)K AAS(-125.48)DPLLS(-38.63)S(-17.22)VS(17.22)PAVS(-27.26)K 0 0 1 0 B4DIA5;A0A024QZ23;P19532 B4DIA5 B4DIA5 TFE3 Transcription factor E3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 808.9076 2 804.89766 1607.78077 69585.41 1.4927 0.0012015 0.55324 0.0004453 2.0459 0.0016468 804.897737218918 808.905066932934 102.19 0.89558 102.19 101.76 102.66 7.6294E-06 281 71 6 0 0 0 3.0407E-51 2 58766 152.94 138.25 5 1.3687 1.6784 0 20986000 9176100 11810000 52 6 23 26 81;82 82 3;4;5;6 AASDPLLSSVSPAVSK 16 1 0 Phospho (STY) _AAS(ph)DPLLSSVSPAVSK_ AAS(1)DPLLSSVSPAVSK AAS(41.58)DPLLS(-41.58)S(-55.92)VS(-62.96)PAVS(-73.5)K 0 0 1 0 B4DIA5;A0A024QZ23;P19532 B4DIA5 B4DIA5 TFE3 Transcription factor E3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 805.3992 2 804.89766 1607.78077 69697.89 0.94775 0.00076284 -0.24469 -0.00019695 0.70306 0.00056589 804.897022472466 808.90472410122 108.68 0.6517 108.68 108.36 109.01 0 174 51 6 0 0 0 1.8052E-06 5 63688 77.222 70.689 5 1.2533 1.5456 0 23102000 11436000 11666000 53 6 23 26 83;84;85;86;87 85 3;4;5;6 AASDPLLSSVSPAVSK 16 1 0 Phospho (STY) _AAS(ph)DPLLSSVSPAVSK_ AAS(1)DPLLSSVSPAVSK AAS(37.74)DPLLS(-37.74)S(-48.45)VS(-52.1)PAVS(-55.21)K 0 0 1 0 B4DIA5;A0A024QZ23;P19532 B4DIA5 B4DIA5 TFE3 Transcription factor E3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 804.8995 2 804.89766 1607.78077 69227.26 1.2581 0.0010126 0.04905 3.948E-05 1.3072 0.0010521 804.89774738783 808.904591292871 115.07 0.83263 115.07 114.57 115.4 0 374 78 8 0 0 0 0.00011641 1 74161 58.83 52.726 5 1.1382 0.8822 0 15561000 6849500 8711600 54 6 23 26 88 88 3;4;5;6 AASDPLLSSVSPAVSK 16 1 0 Phospho (STY) _AASDPLLSS(ph)VSPAVSK_ AASDPLLS(0.013)S(0.565)VS(0.411)PAVS(0.011)K AAS(-62.59)DPLLS(-16.38)S(1.39)VS(-1.39)PAVS(-16.99)K 0 0 1 0 B4DIA5;A0A024QZ23;P19532 B4DIA5 B4DIA5 TFE3 Transcription factor E3 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 805.3997 2 804.89766 1607.78077 NaN NaN NaN 1.5456 0.0012441 NaN NaN NaN NaN 107.65 0.63209 107.65 107.36 107.99 0 0 0 0 2.622E-07 1 69367 76.85 51.633 5 NaN NaN 0 5689300 5689300 0 55 6 23 26 89 89 3;4;5;6 AASDPLLSSVSPAVSK 16 1 0 2 Phospho (STY) _AASDPLLSS(ph)VS(ph)PAVSK_ AASDPLLS(0.195)S(0.807)VS(0.986)PAVS(0.012)K AAS(-85.54)DPLLS(-6.22)S(6.22)VS(19.42)PAVS(-19.42)K 0 0 2 0 B4DIA5;A0A024QZ23;P19532 B4DIA5 B4DIA5 TFE3 Transcription factor E3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 848.892 2 844.880826 1687.7471 67947.84 1.0048 0.00084895 0.47224 0.00039899 1.4771 0.0012479 844.880862926601 848.888803859577 103.34 0.58871 103.34 102.97 103.56 0 106 40 4 0 0 0 4.2256E-22 1 59579 112.57 89.655 10 1.0751 1.2755 0 10622000 4749400 5872600 56 6 23 27 90 90 3;4;5;6 AASDPLLSSVSPAVSK 16 1 0 2 Phospho (STY) _AASDPLLSSVS(ph)PAVS(ph)K_ AASDPLLS(0.251)S(0.307)VS(0.742)PAVS(0.701)K AAS(-38.07)DPLLS(-6.89)S(-6.89)VS(6.89)PAVS(6.89)K 0 0 2 0 B4DIA5;A0A024QZ23;P19532 B4DIA5 B4DIA5 TFE3 Transcription factor E3 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 848.8902 2 844.880826 1687.7471 NaN NaN NaN -0.53371 -0.00045092 NaN NaN NaN NaN 107.29 0.59271 107.29 107.07 107.66 7.6294E-06 0 0 0 0.0015239 1 62774 42.913 23.074 10 NaN NaN 0 4992700 0 4992700 57 6 23 27 91 91 3;4;5;6 AASPESASSTPESLQAR 17 0 1 Phospho (STY) _AAS(ph)PESASSTPESLQAR_ AAS(0.989)PES(0.011)ASSTPESLQAR AAS(19.68)PES(-19.68)AS(-47.34)S(-55.39)T(-58.92)PES(-62.86)LQAR 0 0 1 0 B3KPB2;A8K662;Q96BT3;B4DV17;B4DWP4 B3KPB2 B3KPB2 CENPT Centromere protein T MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 889.896 2 884.891095 1767.76764 65923.77 0.85281 0.00075464 0.0081683 7.228E-06 0.86098 0.00076187 884.89102384697 889.895249016456 56.672 1.0231 56.672 56.148 57.171 0 472 86 7 0 0 0 2.284E-05 3 24904 68.576 68.576 6 1.2645 1.5908 0 46175000 19117000 27058000 58 479 24 28 92;93;94 94 830 AASPESASSTPESLQAR 17 0 1 Phospho (STY) _AAS(ph)PESASSTPESLQAR_ AAS(0.986)PES(0.013)ASSTPESLQAR AAS(18.75)PES(-18.75)AS(-34.35)S(-45.71)T(-52.04)PES(-58.42)LQAR 0 0 1 0 B3KPB2;A8K662;Q96BT3;B4DV17;B4DWP4 B3KPB2 B3KPB2 CENPT Centromere protein T MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 889.8979 2 884.891095 1767.76764 64677.11 1.1552 0.0010222 0.14636 0.00012951 1.3016 0.0011517 884.891195084572 889.895454293081 52.842 1.396 52.842 52.203 53.599 0 828 121 11 0 0 0 5.2526E-05 2 31802 62.203 56.596 6 1.6908 1.1314 0 125130000 46698000 78427000 59 479 24 28 95;96 95 830 AASPPASASDLIEQQQK 17 1 0 Phospho (STY) _AAS(ph)PPASASDLIEQQQK_ AAS(1)PPASASDLIEQQQK AAS(57.07)PPAS(-57.07)AS(-79.79)DLIEQQQK 0 0 1 0 A8K4U4;Q5VSL9 A8K4U4 A8K4U4 STRIP1 Striatin-interacting protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 914.9329 2 910.924938 1819.83532 66451.03 0.74219 0.00067608 0.46947 0.00042765 1.2117 0.0011037 910.924945186862 914.932141418381 82.142 1.0114 82.142 81.715 82.726 0 297 95 5 0 0 0 9.023E-17 3 43916 108.34 108.34 3 1.0828 1.3591 0 27949000 13138000 14811000 60 466 25 29 97;98;99 99 813 AASSPSNPAALPVASDSSPMGSK 23 1 0 Oxidation (M),Phospho (STY) _AASSPSNPAALPVASDS(ph)SPM(ox)GSK_ AASSPSNPAALPVASDSSPM(1)GSK AASSPSNPAALPVAS(0.083)DS(0.382)S(0.382)PMGS(0.153)K AASSPSNPAALPVASDSSPM(91.64)GSK AAS(-80.28)S(-79.96)PS(-81.15)NPAALPVAS(-6.63)DS(0)S(0)PMGS(-3.99)K 0 1 1 0 Q7Z5J4 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1117.5035 2 1112.99322 2223.97189 57510.42 0.7862 0.00087504 -0.25629 -0.00028524 0.52992 0.00058979 1113.49500210135 1117.00022639525 77.789 0.96219 77.789 77.426 78.388 0 584 87 9 0 0 0 3.0593E-24 1 49765 91.64 70.976 7 1.8212 1.1951 0 53072000 20049000 33023000 61 1137 26 30 100 100 321 2171;2172 AASVHTVGEDTEETPHR 17 0 1 Unmodified _AASVHTVGEDTEETPHR_ 0 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 615.9583 3 612.622133 1834.84457 78661.76 0.49315 0.00030212 0.09454 5.7917E-05 0.58769 0.00036003 612.62207290062 615.958237218122 72.344 0.42601 72.344 72.176 72.602 0 134 32 7 0 0 0 1.6392E-05 1 36546 65.47 47.769 1 0.28452 0.35841 0 55601000 38969000 16632000 62 1175 27 31 101 101 AAVGQESPGGLEAGNAK 17 1 0 Phospho (STY) _AAVGQES(ph)PGGLEAGNAK_ AAVGQES(1)PGGLEAGNAK AAVGQES(108.96)PGGLEAGNAK 0 0 1 0 B3KMN2;Q96DB6;G1UI16;Q29RF7 B3KMN2 B3KMN2 PDS5A Sister chromatid cohesion protein PDS5 homolog A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 818.3725 2 818.372341 1634.73013 66789.13 0.75326 0.00061645 -0.23681 -0.0001938 0.51645 0.00042265 818.371872230652 822.380087499959 55.352 1.1194 55.352 54.759 55.878 3.8147E-06 478 90 7 0 0 0 6.0971E-17 3 23869 108.96 95.95 1 0.38251 0.48492 0 41902000 29390000 12511000 63 575 28 32 102;103;104 104 954 AAVGVSMAHFSVSDALMSPPPK 22 1 0 2 Oxidation (M),Phospho (STY) _AAVGVSM(ox)AHFSVSDALM(ox)S(ph)PPPK_ AAVGVSM(1)AHFSVSDALM(1)SPPPK AAVGVSMAHFS(0.007)VS(0.036)DALMS(0.957)PPPK AAVGVSM(88.04)AHFSVSDALM(88.04)SPPPK AAVGVS(-36.69)MAHFS(-21.16)VS(-14.25)DALMS(14.25)PPPK 0 2 1 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 773.6948 3 771.021462 2310.04256 70075.08 0.81511 0.00062847 -0.1195 -9.2139E-05 0.69561 0.00053633 771.35564045203 774.027343082803 104.29 0.96447 104.29 103.81 104.77 0 322 68 8 0 0 0 1.2771E-19 1 60140 88.036 74.409 4 1.1307 1.3991 0 23893000 10077000 13815000 64 1195 29 33 105 105 333;334 2366 ACVHPSPLRR 10 0 2 Phospho (STY) _ACVHPS(ph)PLRR_ ACVHPS(1)PLRR ACVHPS(48.66)PLRR 0 0 1 1 A0A0D9SF94;Q86Y97 A0A0D9SF94 A0A0D9SF94 SUV420H2 Histone-lysine N-methyltransferase SUV420H2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 424.8728 3 424.872551 1271.59583 90287.4 -0.097927 -4.1606E-05 0.13546 5.7555E-05 0.037537 1.5948E-05 424.872584182779 431.544776180217 20.439 0.34674 20.439 20.274 20.62 0 93 16 8 0 0 0 0.0035571 1 7295 48.659 43.561 1 1.0347 0.89048 0 19941000 9344400 10597000 65 332 30 34 106 106 521 ADGAPSAAPPDGLLASPDLGLLK 23 1 0 Phospho (STY) _ADGAPSAAPPDGLLAS(ph)PDLGLLK_ ADGAPSAAPPDGLLAS(1)PDLGLLK ADGAPS(-47.64)AAPPDGLLAS(47.64)PDLGLLK 0 0 1 0 P17535 P17535 P17535 JUND Transcription factor jun-D MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1114.058 2 1113.55632 2225.09808 58405.28 0.70726 0.00078757 -0.43786 -0.00048758 0.2694 0.00029999 1114.0574017264 1118.06430993418 133.47 0.32147 133.47 133.32 133.64 0 96 13 11 0 0 0 6.5307E-15 2 81276 74.364 61.597 2 0.51565 0.63823 0 218940000 141330000 77608000 66 970 31 35 107;108 108 1722 ADGYVLEGK 9 1 0 Unmodified _ADGYVLEGK_ 0 0 0 0 Q5JR95;Q5JR94;P62241;Q9BS10 Q5JR95 Q5JR95 RPS8 40S ribosomal protein S8 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 476.2428 2 476.242732 950.470912 89632.75 0.55705 0.00026529 0.28963 0.00013793 0.84668 0.00040322 476.242693853655 480.249796370371 38.313 0.54964 38.313 38.078 38.627 0 182 49 5 0 0 0 0.00081666 2 22005 85.676 64.376 1 0.89283 0.68954 0 7418200 3977000 3441200 67 1016 32 36 109;110 110 ADLESLLQTPGGK 13 1 0 Phospho (STY) _ADLESLLQT(ph)PGGK_ ADLESLLQT(1)PGGK ADLES(-99.08)LLQT(99.08)PGGK 0 0 1 0 B3KRQ2;Q86XI2;B4DHE5;B4DXB7;Q9NXD3;H0Y6U5 B3KRQ2 B3KRQ2 NCAPG2 Condensin-2 complex subunit G2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 704.8401 2 704.839614 1407.66468 NaN NaN NaN 0.084197 5.9345E-05 NaN NaN NaN NaN 109.85 0.82137 109.85 109.38 110.21 0 0 0 0 1.8563E-57 1 64517 150.22 107.82 2 NaN NaN 0 17099000 17099000 0 68 593 33 37 111 111 2775 ADLLQREEEEEEEEDQEGDRETTIR 25 0 3 Unmodified _ADLLQREEEEEEEEDQEGDRETTIR_ 0 0 0 2 A0A0B4J2E5;Q15269 A0A0B4J2E5 A0A0B4J2E5 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 770.3502 4 762.843261 3047.34394 69613.47 1.1897 0.00090752 0.15518 0.00011838 1.3448 0.0010259 763.093772272044 770.600507125709 103.17 1.3371 103.17 102.36 103.7 -7.6294E-06 352 97 8 0 0 0 5.5281E-18 5 59765 71.052 65.753 1 0.74785 0.87125 0 32733000 19029000 13704000 69 313 34 38 112;113;114;115;116 115 ADLNQGIGEPQSPSRR 16 0 2 Phospho (STY) _ADLNQGIGEPQS(ph)PSRR_ ADLNQGIGEPQS(0.5)PS(0.5)RR ADLNQGIGEPQS(0)PS(0)RR 0 0 1 1 A0A024QZ77;Q96C19 A0A024QZ77 A0A024QZ77 EFHD2 EF-hand domain-containing protein D2 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 608.9561 3 602.282773 1803.82649 NaN NaN NaN -0.18111 -0.00010908 NaN NaN NaN NaN 41.509 1.1912 41.509 41.054 42.245 3.8147E-06 0 0 0 0.0018837 1 24417 40.81 25.72 2 NaN NaN 0 11623000 0 11623000 70 9 35 39 117 117 11;12 ADPDGPEAQAEACSGER 17 0 1 Phospho (STY) _ADPDGPEAQAEACS(ph)GER_ ADPDGPEAQAEACS(1)GER ADPDGPEAQAEACS(52.86)GER 0 0 1 0 J3QSY4;D6RC52;D6RCB9;Q9NX24 J3QSY4 J3QSY4 NHP2 H/ACA ribonucleoprotein complex subunit 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 920.347 2 920.346194 1838.67784 66008.84 0.47222 0.0004346 0.3741 0.0003443 0.84631 0.0007789 920.346794335974 925.350873180926 37.535 0.8983 37.535 37.043 37.942 0 381 82 8 0 0 0 9.317E-05 1 12706 52.862 43.812 1 0.38047 0.41263 0 3498800 2525600 973170 71 775 36 40 118 118 1311 ADPDGPEAQAEACSGER 17 0 1 Phospho (STY) _ADPDGPEAQAEACS(ph)GER_ ADPDGPEAQAEACS(1)GER ADPDGPEAQAEACS(51.09)GER 0 0 1 0 J3QSY4;D6RC52;D6RCB9;Q9NX24 J3QSY4 J3QSY4 NHP2 H/ACA ribonucleoprotein complex subunit 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 920.3463 2 920.346194 1838.67784 65012.65 0.82388 0.00075825 -0.60018 -0.00055238 0.22369 0.00020587 920.847337267184 925.851063134044 27.617 0.48041 27.617 27.408 27.889 0 108 28 6 0 0 0 0.00013435 1 13563 51.089 39.296 1 0.6744 0.50749 0 20457000 13089000 7367800 72 775 36 40 119 119 1311 ADRDESSPYAAMLAAQDVAQR 21 0 2 Oxidation (M) _ADRDESSPYAAM(ox)LAAQDVAQR_ ADRDESSPYAAM(1)LAAQDVAQR ADRDESSPYAAM(90.97)LAAQDVAQR 0 1 0 1 P62263;H0YB22;E5RH77 P62263 P62263 RPS14 40S ribosomal protein S14 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 768.0301 3 761.021967 2280.04407 69171.02 1.1413 0.00086859 0.026004 1.979E-05 1.1673 0.00088838 761.022397894636 767.694290371953 95.727 1.0749 95.727 94.989 96.064 0 359 96 7 0 0 0 2.358E-19 2 53604 90.968 81.684 1 1.255 1.5577 0 49732000 23758000 25974000 73 1017 37 41 120;121 120 291 ADRDESSPYAAMLAAQDVAQR 21 0 2 Oxidation (M) _ADRDESSPYAAM(ox)LAAQDVAQR_ ADRDESSPYAAM(1)LAAQDVAQR ADRDESSPYAAM(67.25)LAAQDVAQR 0 1 0 1 P62263;H0YB22;E5RH77 P62263 P62263 RPS14 40S ribosomal protein S14 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 767.6946 3 761.021967 2280.04407 NaN NaN NaN -0.27446 -0.00020887 NaN NaN NaN NaN 94.853 0.51779 94.853 94.608 95.125 0 0 0 0 5.9007E-11 1 53159 67.251 52.322 1 NaN NaN 0 10191000 0 10191000 74 1017 37 41 122 122 291 ADRDESSPYAAMLAAQDVAQR 21 0 2 Oxidation (M) _ADRDESSPYAAM(ox)LAAQDVAQR_ ADRDESSPYAAM(1)LAAQDVAQR ADRDESSPYAAM(60.03)LAAQDVAQR 0 1 0 1 P62263;H0YB22;E5RH77 P62263 P62263 RPS14 40S ribosomal protein S14 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 761.0236 3 761.021967 2280.04407 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.282 1 95.282 94.782 95.782 -7.6294E-06 0 0 0 4.1471E-05 1 53509 60.032 50.617 1 75 1017 37 41 123 123 291 ADRSPSLSVAPQDR 14 0 2 Phospho (STY) _ADRS(ph)PSLSVAPQDR_ ADRS(0.958)PS(0.028)LS(0.013)VAPQDR ADRS(15.28)PS(-15.28)LS(-18.57)VAPQDR 0 0 1 1 Q5VWN6 Q5VWN6 Q5VWN6 FAM208B Protein FAM208B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 789.869 2 789.867226 1577.7199 68379.27 0.83004 0.00065562 0.19699 0.0001556 1.027 0.00081122 789.867827002222 799.875422638376 65.199 0.50741 65.199 64.998 65.505 0 150 36 5 0 0 0 0.0021321 2 31345 55.755 38.534 3 0.75297 0.93354 0 37904000 23085000 14819000 76 1113 38 42 124;125 125 2105 ADSLLEDITDIPK 13 1 0 Phospho (STY) _ADS(ph)LLEDITDIPK_ ADS(1)LLEDITDIPK ADS(53.47)LLEDIT(-53.47)DIPK 0 0 1 0 Q49AC8;G3V1L6;Q54A15;B2RAX1;Q9BQL6 Q49AC8 Q49AC8 FERMT1;DTGCU2 Fermitin family homolog 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 755.3582 2 755.357837 1508.70112 71691.62 0.80702 0.00060959 -0.077635 -5.8642E-05 0.72939 0.00055095 755.357625095463 759.364742491574 131.18 0.42798 131.18 131 131.43 0 102 36 4 0 0 0 0.0039836 2 79719 64.224 54.337 2 0.83318 0.9878 0 6323100 3246000 3077200 77 550 39 43 126;127 127 909 ADTEEEFLAFR 11 0 1 Unmodified _ADTEEEFLAFR_ 0 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 669.3156 2 664.311874 1326.6092 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.1 1 111.1 110.6 111.6 0 0 0 0 0.0015407 1 65692 108.98 76.657 1 78 994 40 44 128 128 ADTGLDDDIENEADISMYGK 20 1 0 Oxidation (M),Phospho (STY) _ADTGLDDDIENEADIS(ph)M(ox)YGK_ ADTGLDDDIENEADISM(1)YGK ADTGLDDDIENEADIS(1)MYGK ADTGLDDDIENEADISM(166.3)YGK ADT(-144.53)GLDDDIENEADIS(58.37)MY(-58.37)GK 0 1 1 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1134.9504 2 1134.44851 2266.88247 58609.69 0.90212 0.0010234 -0.66253 -0.00075161 0.23959 0.0002718 1134.94959646231 1138.45441501469 102.61 0.85696 102.61 102.15 103.01 0 392 62 9 0 0 0 5.3306E-75 3 59122 166.3 147.35 3 0.63602 0.80313 0 46977000 30974000 16003000 79 943 41 45 129;130;131 131 257 1615 ADTGLDDDIENEADISMYGK 20 1 0 Oxidation (M),Phospho (STY) _ADTGLDDDIENEADIS(ph)M(ox)YGK_ ADTGLDDDIENEADISM(1)YGK ADTGLDDDIENEADIS(0.999)MY(0.001)GK ADTGLDDDIENEADISM(77.03)YGK ADT(-74.6)GLDDDIENEADIS(32.6)MY(-32.6)GK 0 1 1 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1134.9513 2 1134.44851 2266.88247 57618.27 0.76642 0.00086946 0.1805 0.00020477 0.94691 0.0010742 1134.95009423184 1138.95631533628 110.51 0.57947 110.51 110.24 110.82 0 342 53 9 0 0 0 2.5488E-10 2 71106 77.031 60.03 3 0.74542 0.48637 0 32431000 19195000 13236000 80 943 41 45 132;133 133 257 1615 ADVEVSSMSPTK 12 1 0 Phospho (STY) _ADVEVS(ph)SMSPTK_ ADVEVS(0.25)S(0.25)MS(0.25)PT(0.25)K ADVEVS(0)S(0)MS(0)PT(0)K 0 0 1 0 REV__O60882 REV__O60882 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 669.7895 2 665.78345 1329.55235 74009.66 0.98119 0.00065326 -2.7012 -0.0017984 -1.72 -0.0011451 665.781648615298 669.788834309624 48.037 2.234 48.037 47.374 49.608 0 541 162 6 0 0 0 0.0106 1 18618 46.891 27.62 4 0.72896 0.92421 0 34973000 21110000 13863000 + 81 1274 42 46 134 134 2609;2610;2611;3012 ADVQSIIGLQR 11 0 1 Phospho (STY) _ADVQS(ph)IIGLQR_ ADVQS(1)IIGLQR ADVQS(76.52)IIGLQR 0 0 1 0 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 640.3245 2 640.323934 1278.63332 78119.05 0.86707 0.0005552 -0.28464 -0.00018226 0.58243 0.00037294 640.323758498806 645.327836064231 109.28 0.71996 109.28 108.86 109.58 0 143 56 4 0 0 0 0.00162 2 64183 76.522 46.587 1 1.5071 1.7944 0 15864000 7588400 8275400 82 542 43 47 135;136 136 900 AEAEGSPAAEPSPFLGK 17 1 0 Phospho (STY) _AEAEGS(ph)PAAEPSPFLGK_ AEAEGS(1)PAAEPSPFLGK AEAEGS(72.11)PAAEPS(-72.11)PFLGK 0 0 1 0 B3KRV8;Q86V15 B3KRV8 B3KRV8 CASZ1 Zinc finger protein castor homolog 1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 873.3998 2 869.3902 1736.76585 NaN NaN NaN 0.52352 0.00045514 NaN NaN NaN NaN 88.898 0.43042 88.898 88.685 89.115 0 0 0 0 6.3205E-22 1 48676 107.82 92.189 2 NaN NaN 0 11674000 0 11674000 83 595 44 48 137 137 978 AEAEGSPAAEPSPFLGK 17 1 0 Phospho (STY) _AEAEGS(ph)PAAEPSPFLGK_ AEAEGS(1)PAAEPSPFLGK AEAEGS(66.77)PAAEPS(-66.77)PFLGK 0 0 1 0 B3KRV8;Q86V15 B3KRV8 B3KRV8 CASZ1 Zinc finger protein castor homolog 1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 873.3971 2 869.3902 1736.76585 NaN NaN NaN 0.83055 0.00072207 NaN NaN NaN NaN 89.138 0.20995 89.138 89.075 89.284 0 0 0 0 3.318E-15 1 48744 96.489 79.716 2 NaN NaN 0 9841200 0 9841200 84 595 44 48 138 138 978 AEAPAGPALGLPSPEAESGVDR 22 0 1 Phospho (STY) _AEAPAGPALGLPS(ph)PEAESGVDR_ AEAPAGPALGLPS(0.954)PEAES(0.046)GVDR AEAPAGPALGLPS(13.19)PEAES(-13.19)GVDR 0 0 1 0 L0R6D6;Q53F19 L0R6D6 L0R6D6 C17orf85 Uncharacterized protein C17orf85 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1086.5061 2 1086.00445 2169.99434 60327.38 0.39023 0.00042379 0.42151 0.00045776 0.81174 0.00088155 1086.50509122206 1091.0110316449 107.26 0.49639 107.26 106.96 107.46 0 72 40 4 0 0 0 1.2808E-06 1 62462 49.865 40.933 2 0.54002 0.64374 0 16133000 8052300 8081000 85 907 45 49 139 139 1533 AEDSDSEPEPEDNVR 15 0 1 Phospho (STY) _AEDS(ph)DSEPEPEDNVR_ AEDS(0.5)DS(0.5)EPEPEDNVR AEDS(0)DS(0)EPEPEDNVR 0 0 1 0 B4E0B9;B4DZC3;B3KMC9;Q9H0D6 B4E0B9 B4E0B9 XRN2 5-3 exoribonuclease 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 885.3329 2 884.8309 1767.64725 66234.34 0.76372 0.00067576 0.5171 0.00045755 1.2808 0.0011333 884.831418683899 889.836033786507 43.204 0.79617 43.204 42.709 43.505 0 243 54 6 0 0 0 0.0014206 1 15612 44.457 42.516 2 1.161 1.2617 0 3952100 1659700 2292400 86 572 46 50 140 140 950;951 AEDSDSEPEPEDNVR 15 0 1 2 Phospho (STY) _AEDS(ph)DS(ph)EPEPEDNVR_ AEDS(1)DS(1)EPEPEDNVR AEDS(86.5)DS(86.5)EPEPEDNVR 0 0 2 0 B4E0B9;B4DZC3;B3KMC9;Q9H0D6 B4E0B9 B4E0B9 XRN2 5-3 exoribonuclease 2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 924.8158 2 924.814065 1847.61358 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.612 1 40.612 40.112 41.112 0 0 0 0 0.00040728 1 14307 86.497 68.481 1 87 572 46 51 141 141 950;951 AEDVSSAAPSPR 12 0 1 Acetyl (Protein N-term),Phospho (STY) _(ac)AEDVSSAAPS(ph)PR_ AEDVSS(0.002)AAPS(0.998)PR AEDVS(-51.37)S(-27.68)AAPS(27.68)PR 1 0 1 0 E5RFJ5;A8K914;P54274 E5RFJ5 E5RFJ5 TERF1 Telomeric repeat-binding factor 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 654.777 2 654.777014 1307.53948 NaN NaN NaN 0.16399 0.00010737 NaN NaN NaN NaN 57.88 1.0567 57.88 57.323 58.379 0 0 0 0 1.4312E-06 1 25665 91.441 71.137 3 NaN NaN 0 18235000 18235000 0 88 499 47 52 142 142 855 AEEDEILNRSPR 12 0 2 Phospho (STY) _AEEDEILNRS(ph)PR_ AEEDEILNRS(1)PR AEEDEILNRS(83.54)PR 0 0 1 1 P27824 P27824 P27824 CANX Calnexin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 503.5627 3 503.562877 1507.6668 83927.28 0.29562 0.00014886 0.02953 1.487E-05 0.32514 0.00016373 503.562790760853 510.235109754591 65.768 0.72514 65.768 65.556 66.281 0 235 56 5 0 0 0 0.00017594 1 31728 83.54 70.979 1 0.46621 0.58044 0 103700000 69066000 34630000 89 979 48 53 143 143 1731 AEEDEILNRSPR 12 0 2 Phospho (STY) _AEEDEILNRS(ph)PR_ AEEDEILNRS(1)PR AEEDEILNRS(49.48)PR 0 0 1 1 P27824 P27824 P27824 CANX Calnexin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 510.2354 3 503.562877 1507.6668 84342.41 0.46239 0.00023284 0.082748 4.1669E-05 0.54514 0.00027451 503.562889252461 510.235100520614 45.313 2.1992 45.313 44.577 46.776 0 815 201 6 0 0 0 0.0037149 2 27260 49.482 40.916 1 0.55791 0.4836 0 46103000 30913000 15190000 90 979 48 53 144;145 145 1731 AEEDEILNRSPR 12 0 2 Phospho (STY) _AEEDEILNRS(ph)PR_ AEEDEILNRS(1)PR AEEDEILNRS(44.44)PR 0 0 1 1 P27824 P27824 P27824 CANX Calnexin ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 754.8417 2 754.840677 1507.6668 NaN NaN NaN 0.12274 9.2647E-05 NaN NaN NaN NaN 45.319 2.1755 45.319 44.567 46.742 3.8147E-06 0 0 0 0.03319 1 26685 44.436 10.257 1 NaN NaN 0 28776000 28776000 0 91 979 48 53 146 146 1731 AEEILEK 7 1 0 Unmodified _AEEILEK_ 0 0 0 0 Q5VVC9;Q5VVC8;Q08ES8;Q5VVD0;P62913 Q5VVC9 Q5VVC9 RPL11 60S ribosomal protein L11 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 420.2344 2 416.226551 830.438549 NaN NaN NaN 0.37575 0.0001564 NaN NaN NaN NaN 60.568 0.40943 60.568 60.338 60.747 3.8147E-06 0 0 0 0.024784 1 27665 55.676 14.174 1 NaN NaN 0 3956200 0 3956200 92 1021 49 54 147 147 AEENTDQASPQEDYAGFER 19 0 1 Phospho (STY) _AEENTDQAS(ph)PQEDYAGFER_ AEENT(0.16)DQAS(0.818)PQEDY(0.022)AGFER AEENT(-7.1)DQAS(7.1)PQEDY(-15.62)AGFER 0 0 1 0 Q6PJJ1;Q6AI22;Q9NU22 Q6PJJ1 Q6PJJ1 MDN1;DKFZp686H16106 Midasin ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1119.4388 2 1118.93696 2235.85937 NaN NaN NaN 0.12642 0.00014146 NaN NaN NaN NaN 72.967 0.37756 72.967 72.854 73.232 0 0 0 0 3.124E-05 3 37134 49.31 36.173 3 NaN NaN 0 11421000 11421000 0 93 1117 50 55 148;149;150 148 2116 AEEQQLPPPLSPPSPSTPNHR 21 0 1 2 Phospho (STY) _AEEQQLPPPLS(ph)PPS(ph)PSTPNHR_ AEEQQLPPPLS(0.957)PPS(0.744)PS(0.202)T(0.097)PNHR AEEQQLPPPLS(14.36)PPS(6.28)PS(-6.28)T(-9.46)PNHR 0 0 2 0 J3KSW8;Q6WCQ1;B9EGI2;U6FSN9;Q8N236 J3KSW8 J3KSW8 MPRIP;Mprip-Ntrk1 fusion gene Myosin phosphatase Rho-interacting protein;Tyrosine-protein kinase receptor MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 817.0349 3 813.696233 2438.06687 67330.34 1.0178 0.00082815 0.61558 0.00050089 1.6333 0.001329 814.367538284536 817.366771239324 94.589 1.3992 94.589 94.064 95.463 0 478 114 7 0 0 0 1.9969E-06 1 52761 47.099 31.936 6 3.1567 3.9751 0 52913000 13927000 38986000 94 892 51 56 151 151 1517;1518 AEEYTEETEEREESTTGFDK 20 1 1 Unmodified _AEEYTEETEEREESTTGFDK_ 0 0 0 1 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 800.3474 3 794.003073 2378.98739 NaN NaN NaN -0.14228 -0.00011297 NaN NaN NaN NaN 73.181 0.28256 73.181 73.014 73.297 0 0 0 0 5.693E-05 1 37203 49.188 26.542 1 NaN NaN 0 13186000 0 13186000 95 1248 52 57 152 152 AEEYTEETEEREESTTGFDK 20 1 1 Unmodified _AEEYTEETEEREESTTGFDK_ 0 0 0 1 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 794.0038 3 794.003073 2378.98739 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.178 1 73.178 72.678 73.678 0 0 0 0 0.0020265 1 37218 38.377 23.916 1 96 1248 52 57 153 153 AEFEDQDDEAR 11 0 1 Unmodified _AEFEDQDDEAR_ 0 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 662.7686 2 662.768028 1323.5215 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.019 1 48.019 47.519 48.519 0 0 0 0 0.0017275 1 18731 67.113 54.486 1 97 1062 53 58 154 154 AEFTSPPSLFK 11 1 0 Phospho (STY) _AEFTS(ph)PPSLFK_ AEFT(0.054)S(0.891)PPS(0.054)LFK AEFT(-12.15)S(12.15)PPS(-12.15)LFK 0 0 1 0 B4DTW7;A0A0B4J203;Q6UN15 B4DTW7 B4DTW7 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 656.3107 2 652.302136 1302.58972 76609.58 0.98318 0.00064133 0.49394 0.0003222 1.4771 0.00096353 652.301929826369 656.310432271343 117.62 1.5906 117.62 116.84 118.43 0 398 141 6 0 0 0 0.0077121 1 70286 61.235 51.004 3 1.1759 1.4334 0 18545000 8777800 9767100 98 309 54 59 155 155 491 AEFTSPPSLFK 11 1 0 Phospho (STY) _AEFTS(ph)PPSLFK_ AEFT(0.043)S(0.719)PPS(0.238)LFK AEFT(-12.19)S(4.8)PPS(-4.8)LFK 0 0 1 0 B4DTW7;A0A0B4J203;Q6UN15 B4DTW7 B4DTW7 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 652.3032 2 652.302136 1302.58972 76721.05 1.2182 0.00079466 0.33671 0.00021964 1.555 0.0010143 652.302026245383 656.810637815687 124.7 0.97097 124.7 124.18 125.15 7.6294E-06 312 91 5 0 0 0 0.021951 1 80829 40.475 37.363 3 0.91716 0.77616 0 4611900 2756600 1855300 99 309 54 59 156 156 491 AEGEPQEESPLK 12 1 0 Phospho (STY) _AEGEPQEES(ph)PLK_ AEGEPQEES(1)PLK AEGEPQEES(85.27)PLK 0 0 1 0 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09;E9PJA7 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 697.2989 2 697.297779 1392.58101 73097.2 0.85285 0.00059469 0.17231 0.00012015 1.0252 0.00071485 697.297707207985 701.304935551514 37.156 0.65297 37.156 36.846 37.499 0 345 56 8 0 0 0 0.00036342 2 21077 85.271 76.758 1 1.3147 0.85961 0 47800000 21750000 26051000 100 809 55 60 157;158 157 1389 AEGEWEDQEALDYFSDK 17 1 0 Phospho (STY) _AEGEWEDQEALDYFS(ph)DK_ AEGEWEDQEALDYFS(1)DK AEGEWEDQEALDY(-40.49)FS(40.49)DK 0 0 1 0 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1056.4077 2 1056.40951 2110.80448 60409.51 0.38531 0.00040704 0.16016 0.0001692 0.54547 0.00057624 1056.40963803788 1060.41677641101 111.16 1.1784 111.16 110.34 111.52 0 416 102 8 0 0 0 1.5426E-06 3 65617 73.918 73.918 2 0.73521 0.92448 0 53069000 31413000 21656000 101 809 56 61 159;160;161 160 1390 AEHLESPQLGGK 12 1 0 Phospho (STY) _AEHLES(ph)PQLGGK_ AEHLES(1)PQLGGK AEHLES(92.15)PQLGGK 0 0 1 0 D6RAG4;Q53XI4;Q9NYD6 D6RAG4 D6RAG4 HOXC10 Homeobox protein Hox-C10 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 673.3117 2 673.311024 1344.6075 NaN NaN NaN -0.28676 -0.00019308 NaN NaN NaN NaN 64.331 0.45891 64.331 64.077 64.536 0 0 0 0 3.5414E-06 1 30579 92.151 69.431 1 NaN NaN 0 10551000 10551000 0 102 774 57 62 162 162 1310 AEHLESPQLGGK 12 1 0 Phospho (STY) _AEHLES(ph)PQLGGK_ AEHLES(1)PQLGGK AEHLES(74.13)PQLGGK 0 0 1 0 D6RAG4;Q53XI4;Q9NYD6 D6RAG4 D6RAG4 HOXC10 Homeobox protein Hox-C10 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 677.3194 2 673.311024 1344.6075 73177.42 0.82795 0.00055747 0.1584 0.00010665 0.98635 0.00066412 673.311251020676 677.318278652332 37.125 0.66626 37.125 36.8 37.467 0 201 57 5 0 0 0 0.0016728 1 21053 74.133 74.133 1 1.1386 0.88964 0 13344000 6099800 7244300 103 774 57 62 163 163 1310 AEHMETNAVGPSPSSDTR 18 0 1 Oxidation (M),Phospho (STY) _AEHM(ox)ETNAVGPS(ph)PSSDTR_ AEHM(1)ETNAVGPSPSSDTR AEHMETNAVGPS(0.816)PS(0.088)S(0.061)DT(0.035)R AEHM(41.76)ETNAVGPSPSSDTR AEHMET(-34.19)NAVGPS(9.67)PS(-9.67)S(-11.27)DT(-13.73)R 0 1 1 0 J3KSW8;Q6WCQ1;U6FSN9;Q8N236 J3KSW8 J3KSW8 MPRIP;Mprip-Ntrk1 fusion gene Myosin phosphatase Rho-interacting protein;Tyrosine-protein kinase receptor MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 664.9416 3 661.270093 1980.78845 73507.23 0.56757 0.00037532 0.16677 0.00011028 0.73434 0.0004856 661.270585501874 664.606432136514 22.089 0.73856 22.089 21.799 22.538 1.9073E-06 176 39 8 0 0 0 0.0017723 1 8636 41.763 37.52 5 9.931 6.7461 0 59201000 5733700 53467000 104 892 58 63 164 164 244 1519 AEHMETNAVGPSPSSDTR 18 0 1 Oxidation (M),Phospho (STY) _AEHM(ox)ETNAVGPS(ph)PSSDTR_ AEHM(1)ETNAVGPSPSSDTR AEHMETNAVGPS(0.971)PS(0.02)S(0.006)DT(0.003)R AEHM(80.38)ETNAVGPSPSSDTR AEHMET(-48.56)NAVGPS(16.93)PS(-16.93)S(-21.82)DT(-25.11)R 0 1 1 0 J3KSW8;Q6WCQ1;U6FSN9;Q8N236 J3KSW8 J3KSW8 MPRIP;Mprip-Ntrk1 fusion gene Myosin phosphatase Rho-interacting protein;Tyrosine-protein kinase receptor ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 996.9079 2 991.401501 1980.78845 NaN NaN NaN 0.31045 0.00030778 NaN NaN NaN NaN 22.086 0.64219 22.086 21.896 22.538 0 0 0 0 1.6622E-08 1 8734 80.382 59.443 5 NaN NaN 0 54924000 0 54924000 105 892 58 63 165 165 244 1519 AELNEFLTR 9 0 1 Unmodified _AELNEFLTR_ 0 0 0 0 E9PPU1;H0YEU2;E9PL09;Q53G83;P23396;H0YES8;E9PQX2;E9PQ96;E9PJH4;F2Z2S8;H0YF32;E9PK82;H0YCJ7 E9PPU1 E9PPU1 RPS3 40S ribosomal protein S3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 551.7924 2 546.787838 1091.56112 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.958 1 99.958 99.458 100.46 0 0 0 0 0.0011589 1 57113 79.906 57.166 1 106 812 59 64 166 166 AEPGDEALSPASR 13 0 1 Phospho (STY) _AEPGDEALS(ph)PASR_ AEPGDEALS(0.85)PAS(0.15)R AEPGDEALS(7.55)PAS(-7.55)R 0 0 1 0 A7E2C9;Q9BYK8 A7E2C9 A7E2C9 PRIC285;HELZ2 Helicase with zinc finger domain 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 695.3011 2 690.295571 1378.57659 75621.55 0.98318 0.00067868 -0.28817 -0.00019892 0.69501 0.00047976 690.797014330333 695.299573938462 42.722 0.62164 42.722 42.358 42.979 0 154 54 4 0 0 0 0.0044284 1 25131 62.357 48.588 2 1.4772 1.1809 0 8759500 3930300 4829200 107 433 60 65 167 167 751 AEPSEVDMNSPK 12 1 0 Phospho (STY) _AEPSEVDMNS(ph)PK_ AEPS(0.001)EVDMNS(0.999)PK AEPS(-28.99)EVDMNS(28.99)PK 0 0 1 0 Q9NR30;Q3SWU7 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 696.2849 2 692.278532 1382.54251 73789.51 1.0578 0.00073229 -1.11 -0.00076845 -0.052232 -3.6159E-05 692.277402213135 696.285002188165 40.469 0.71886 40.469 40.119 40.838 0 287 66 6 0 0 0 0.0095022 1 23337 50.292 29.866 2 1.8902 1.4609 0 15923000 6366500 9556000 108 1214 61 66 168 168 2438 AEPVEVVAPR 10 0 1 Unmodified _AEPVEVVAPR_ 0 0 0 0 B2R5W3;A0A024R3T8;P09874;B4E0E1 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 533.7988 2 533.798206 1065.58186 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.364 1 75.364 74.864 75.864 0 0 0 0 0.015545 1 38770 48.423 22.529 1 109 81 62 67 169 169 AESISEEADSEPGR 14 0 1 Phospho (STY) _AESISEEADS(ph)EPGR_ AESISEEADS(1)EPGR AES(-56.55)IS(-36.97)EEADS(36.97)EPGR 0 0 1 0 Q9NSI6 Q9NSI6 Q9NSI6 BRWD1 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 778.811 2 778.809239 1555.60393 69357.64 0.76022 0.00059206 0.43607 0.00033961 1.1963 0.00093168 778.809304280883 783.813480559838 45.11 0.89629 45.11 44.598 45.494 0 345 65 7 0 0 0 0.00014788 2 16630 75.764 61.606 3 0.7247 0.84505 0 13035000 7433000 5601700 110 1218 63 68 170;171 170 2450;2451;2452 AESISEEADSEPGR 14 0 1 Phospho (STY) _AESIS(ph)EEADSEPGR_ AES(0.002)IS(0.998)EEADSEPGR AES(-27.07)IS(27.07)EEADS(-38.4)EPGR 0 0 1 0 Q9NSI6 Q9NSI6 Q9NSI6 BRWD1 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 783.8135 2 778.809239 1555.60393 70744.83 0.56059 0.0004366 -0.099064 -7.7152E-05 0.46153 0.00035944 778.809506089174 783.813646326398 50.752 0.89782 50.752 50.306 51.204 0 289 73 5 0 0 0 9.0775E-06 1 20481 82.908 71.756 3 0.68658 0.76757 0 9668800 5825400 3843400 111 1218 63 68 172 172 2450;2451;2452 AESISEEADSEPGR 14 0 1 Phospho (STY) _AESISEEADS(ph)EPGR_ AESIS(0.001)EEADS(0.999)EPGR AES(-49.15)IS(-31.28)EEADS(31.28)EPGR 0 0 1 0 Q9NSI6 Q9NSI6 Q9NSI6 BRWD1 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 778.8086 2 778.809239 1555.60393 69848.8 1.0161 0.00079132 0.092081 7.1713E-05 1.1081 0.00086303 778.809299566628 783.81357095011 35.813 0.6701 35.813 35.469 36.139 0 302 54 8 0 0 0 0.0026958 2 19964 57.328 43.17 3 1.3642 0.95269 0 36708000 16355000 20353000 112 1218 63 68 173;174 174 2450;2451;2452 AESISEEADSEPGR 14 0 1 2 Phospho (STY) _AES(ph)IS(ph)EEADSEPGR_ AES(1)IS(0.997)EEADS(0.004)EPGR AES(34.7)IS(24.62)EEADS(-24.62)EPGR 0 0 2 0 Q9NSI6 Q9NSI6 Q9NSI6 BRWD1 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 823.7971 2 818.792405 1635.57026 67323.88 0.89437 0.0007323 -0.79561 -0.00065144 0.098763 8.0867E-05 818.79078888141 823.796542558272 46.233 0.8517 46.233 45.866 46.718 0 314 63 6 0 0 0 0.0041581 1 17446 40.801 34.77 3 1.1648 1.2888 0 8376100 4123900 4252200 113 1218 63 69 175 175 2450;2451;2452 AESISEEADSEPGR 14 0 1 2 Phospho (STY) _AES(ph)IS(ph)EEADSEPGR_ AES(1)IS(0.999)EEADS(0.001)EPGR AES(40.6)IS(31.63)EEADS(-31.63)EPGR 0 0 2 0 Q9NSI6 Q9NSI6 Q9NSI6 BRWD1 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 823.7963 2 818.792405 1635.57026 70487.27 0.98923 0.00080997 0.16013 0.00013111 1.1494 0.00094109 818.792299942797 823.79638280272 49.738 0.65966 49.738 49.445 50.105 3.8147E-06 181 64 6 0 0 0 0.0022696 2 29995 46.319 40.203 3 1.7726 1.4027 0 10237000 3978800 6257900 114 1218 63 69 176;177 177 2450;2451;2452 AESPESSAIESTQSTPQK 18 1 0 Phospho (STY) _AES(ph)PESSAIESTQSTPQK_ AES(0.972)PES(0.013)S(0.015)AIESTQSTPQK AES(18.05)PES(-18.74)S(-18.05)AIES(-73.84)T(-78.08)QS(-84.62)T(-84.55)PQK 0 0 1 0 Q9NTI5 Q9NTI5 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 978.9254 2 978.925332 1955.83611 61628.84 0.24462 0.00023946 0.25237 0.00024705 0.49699 0.00048652 978.925632310158 982.932833773519 53.061 1.0632 53.061 52.525 53.588 0 720 87 12 0 0 0 4.5699E-13 2 22320 94.203 87.475 7 0.64549 0.80271 0 83912000 48512000 35400000 115 1219 64 70 178;179 179 2465 AESPESSAIESTQSTPQK 18 1 0 Phospho (STY) _AES(ph)PESSAIESTQSTPQK_ AES(0.999)PES(0.001)SAIESTQSTPQK AES(32.49)PES(-32.49)S(-39.27)AIES(-104.58)T(-109.81)QS(-114.1)T(-118.5)PQK 0 0 1 0 Q9NTI5 Q9NTI5 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 982.9337 2 978.925332 1955.83611 62034.25 0.55173 0.0005401 0.37746 0.00036951 0.92919 0.00090961 978.925592805116 982.932852641641 49.65 1.1951 49.65 49.102 50.297 0 834 115 10 0 0 0 4.3242E-32 2 30082 128.26 117.31 7 0.89558 0.59874 0 141600000 69666000 71935000 116 1219 64 70 180;181 180 2465 AESTLQNSSSAVHTESNK 18 1 0 Unmodified _AESTLQNSSSAVHTESNK_ 0 0 0 0 C9JE56;A0A0C4DFX7;Q9H967 C9JE56 C9JE56 WDR76 WD repeat-containing protein 76 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 630.6327 3 630.632697 1888.87626 79385.82 0.78783 0.00049683 0.037673 2.3758E-05 0.8255 0.00052059 630.632712249491 633.304321469556 56.875 0.4723 56.875 56.642 57.114 0 148 40 6 0 0 0 1.779E-06 1 24798 63.918 58.014 1 0.58577 0.70002 0 13378000 9114000 4263800 117 315 65 71 182 182 AETQGANHTPVISAHQTR 18 0 1 Phospho (STY) _AETQGANHT(ph)PVISAHQTR_ AET(0.01)QGANHT(0.986)PVIS(0.002)AHQT(0.001)R AET(-19.76)QGANHT(19.76)PVIS(-26.08)AHQT(-30.81)R 0 0 1 0 A0A0A0MS59;Q6ZRS2;A0A0C4DFX4 A0A0A0MS59 A0A0A0MS59 SRCAP Helicase SRCAP MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 667.3134 3 666.644482 1996.91162 75162.24 0.5009 0.00033392 0.33938 0.00022624 0.84028 0.00056017 666.644936494462 669.980817592888 22.087 0.38838 22.087 21.876 22.264 -1.9073E-06 119 20 9 0 0 0 1.7947E-05 1 8712 51.234 44.245 4 1.0614 0.79465 0 21314000 9272300 12041000 118 292 66 72 183 183 2682 AETSEGSGSAPAVPEASASPK 21 1 0 Phospho (STY) _AETSEGSGSAPAVPEASAS(ph)PK_ AETSEGSGSAPAVPEAS(0.01)AS(0.99)PK AET(-147.42)S(-141.53)EGS(-110.68)GS(-87.98)APAVPEAS(-20.12)AS(20.12)PK 0 0 1 0 I6LM39;D6QZ43;A0A087X1U4;C6KG44;E1B2J3;E9LUH3;D9ZNA4;D3YJ43;D0UU70;A8K079;A0A140VKC4;E9LUH4;P51608;A0A087WVW7;D5L9I5;C6KG45;A0A075BPH5;A0A0D9SFX7;D5L9I4;B5MCB4;A0A0S2Z3U3;A0A0S2Z401 I6LM39 I6LM39 MECP2 Methyl-CpG-binding protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1005.4391 2 1005.43861 2008.86266 60935.98 0.2693 0.00027077 0.69037 0.00069413 0.95968 0.0009649 1005.43914315646 1009.44645612675 57.472 1.5532 57.472 56.886 58.439 -3.8147E-06 809 126 11 0 0 0 8.2447E-144 2 25398 199.99 189.44 6 0.49733 0.61545 0 236390000 157030000 79360000 119 272 67 73 184;185 184 431 AETSEGSGSAPAVPEASASPK 21 1 0 Phospho (STY) _AETSEGSGSAPAVPEASAS(ph)PK_ AETSEGSGSAPAVPEAS(0.019)AS(0.981)PK AET(-161.81)S(-155.21)EGS(-133.61)GS(-99.13)APAVPEAS(-17.05)AS(17.05)PK 0 0 1 0 I6LM39;D6QZ43;A0A087X1U4;C6KG44;E1B2J3;E9LUH3;D9ZNA4;D3YJ43;D0UU70;A8K079;A0A140VKC4;E9LUH4;P51608;A0A087WVW7;D5L9I5;C6KG45;A0A075BPH5;A0A0D9SFX7;D5L9I4;B5MCB4;A0A0S2Z3U3;A0A0S2Z401 I6LM39 I6LM39 MECP2 Methyl-CpG-binding protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1005.4393 2 1005.43861 2008.86266 60363.32 0.3719 0.00037393 0.33193 0.00033373 0.70383 0.00070766 1005.43908592483 1009.44604179026 54.055 2.0032 54.055 53.375 55.378 3.8147E-06 1202 170 12 0 0 0 3.629E-203 3 33162 229.51 221.6 6 0.71445 0.4766 0 535390000 313720000 221670000 120 272 67 73 186;187;188 188 431 AEVVETTQVYTEEETRR 17 0 2 Unmodified _AEVVETTQVYTEEETRR_ 0 0 0 1 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 687.3408 3 680.667519 2038.98073 NaN NaN NaN 0.13485 9.1789E-05 NaN NaN NaN NaN 83.113 0.17866 83.113 83.01 83.189 0 0 0 0 0.0037573 1 44536 37.583 20.094 1 NaN NaN 0 9758200 0 9758200 121 1070 68 74 189 189 AEVVETTQVYTEEETRR 17 0 2 Unmodified _AEVVETTQVYTEEETRR_ 0 0 0 1 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 687.3403 3 680.667519 2038.98073 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.474 1 83.474 82.974 83.974 0 0 0 0 0.0024793 1 44803 44.294 19.24 1 122 1070 68 74 190 190 AEVVETTQVYTEEETRR 17 0 2 Unmodified _AEVVETTQVYTEEETRR_ 0 0 0 1 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 687.3409 3 680.667519 2038.98073 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.93 1 83.93 83.43 84.43 0 0 0 0 0.0011421 1 45098 51.147 26.353 1 123 1070 68 74 191 191 AEVVETTQVYTEEETRR 17 0 2 Unmodified _AEVVETTQVYTEEETRR_ 0 0 0 1 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 687.3386 3 680.667519 2038.98073 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.208 1 85.208 84.708 85.708 0 0 0 0 0.0036942 1 45988 42.338 19.863 1 124 1070 68 74 192 192 AEVVETTQVYTEEETRR 17 0 2 Unmodified _AEVVETTQVYTEEETRR_ 0 0 0 1 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 687.3412 3 680.667519 2038.98073 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.144 1 87.144 86.644 87.644 0 0 0 0 0.0039841 1 47324 41.871 17.077 1 125 1070 68 74 193 193 AFEEDQVAGR 10 0 1 Unmodified _AFEEDQVAGR_ 0 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 566.2672 2 561.264727 1120.5149 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.417 1 57.417 56.917 57.917 0 0 0 0 0.015719 1 25176 48.283 20.758 1 126 928 69 75 194 194 AFGPGLQGGSAGSPAR 16 0 1 Phospho (STY) _AFGPGLQGGSAGS(ph)PAR_ AFGPGLQGGS(0.006)AGS(0.994)PAR AFGPGLQGGS(-22.36)AGS(22.36)PAR 0 0 1 0 Q5HY54;Q60FE6;Q60FE5;P21333;A6NDY9;A0A087WWY3 Q5HY54 Q5HY54 FLNA Filamin-A ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 760.3511 2 755.345929 1508.67731 NaN NaN NaN 1.351 0.0010204 NaN NaN NaN NaN 70.718 1.2997 70.718 70.048 71.347 0 0 0 0 9.6629E-66 3 35510 146.86 98.963 2 NaN NaN 0 64179000 0 64179000 127 973 70 76 195;196;197 197 1727 AFGPGLQGGSAGSPAR 16 0 1 Phospho (STY) _AFGPGLQGGSAGS(ph)PAR_ AFGPGLQGGS(0.012)AGS(0.988)PAR AFGPGLQGGS(-19.09)AGS(19.09)PAR 0 0 1 0 Q5HY54;Q60FE6;Q60FE5;P21333;A6NDY9;A0A087WWY3 Q5HY54 Q5HY54 FLNA Filamin-A ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 755.3458 2 755.345929 1508.67731 NaN NaN NaN -1.0865 -0.00082072 NaN NaN NaN NaN 70.749 1.3638 70.749 69.984 71.347 0 0 0 0 3.887E-119 1 35388 180.02 152.34 2 NaN NaN 0 73600000 73600000 0 128 973 70 76 198 198 1727 AFGPGLQGGSAGSPAR 16 0 1 Phospho (STY) _AFGPGLQGGSAGS(ph)PAR_ AFGPGLQGGS(0.368)AGS(0.632)PAR AFGPGLQGGS(-2.34)AGS(2.34)PAR 0 0 1 0 Q5HY54;Q60FE6;Q60FE5;P21333;A6NDY9;A0A087WWY3 Q5HY54 Q5HY54 FLNA Filamin-A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 760.351 2 755.345929 1508.67731 69261.02 1.0331 0.00078033 0.030758 2.3233E-05 1.0638 0.00080356 755.34603737206 760.350051342374 68.317 2.4328 68.317 67.296 69.729 0 1067 211 9 0 0 0 4.4101E-61 4 42502 160.64 132.86 2 5.3075 3.5375 0 152150000 24343000 127810000 129 973 70 76 199;200;201;202 199 1727 AFGSGIDIKPGTPPIAGR 18 1 1 Phospho (STY) _AFGSGIDIKPGT(ph)PPIAGR_ AFGS(0.007)GIDIKPGT(0.993)PPIAGR AFGS(-21.61)GIDIKPGT(21.61)PPIAGR 0 0 1 1 H7C5N8;E7EPN9;Q9Y520 H7C5N8 H7C5N8 PRRC2C Protein PRRC2C MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 611.9814 3 611.980143 1832.9186 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.8 1 105.8 105.3 106.3 0 0 0 0 0.0010081 1 61455 50.425 39.637 2 130 789 71 77 203 203 2818 AFHGISPGLLASEK 14 1 0 Phospho (STY) _AFHGIS(ph)PGLLASEK_ AFHGIS(1)PGLLASEK AFHGIS(48.9)PGLLAS(-48.9)EK 0 0 1 0 B3KVD4;Q9P1Z0 B3KVD4 B3KVD4 ZBTB4 Zinc finger and BTB domain-containing protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 505.5882 3 502.916591 1505.72794 86235.58 0.53147 0.00026729 -0.2787 -0.00014016 0.25277 0.00012712 502.916294077708 505.587941020745 110.59 0.69721 110.59 110.39 111.09 0 236 59 7 0 0 0 0.0012836 1 65256 51.265 43.161 2 0.56346 0.68932 0 19748000 13683000 6064400 131 603 72 78 204 204 990 AFHGISPGLLASEK 14 1 0 Phospho (STY) _AFHGIS(ph)PGLLASEK_ AFHGIS(0.994)PGLLAS(0.006)EK AFHGIS(22.17)PGLLAS(-22.17)EK 0 0 1 0 B3KVD4;Q9P1Z0 B3KVD4 B3KVD4 ZBTB4 Zinc finger and BTB domain-containing protein 4 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 753.8702 2 753.871249 1505.72794 NaN NaN NaN -0.19328 -0.00014571 NaN NaN NaN NaN 110.62 0.33189 110.62 110.5 110.83 -7.6294E-06 0 0 0 0.0029185 1 65395 47.621 40.596 2 NaN NaN 0 3915000 3915000 0 132 603 72 78 205 205 990 AFLAELEQNSPK 12 1 0 Phospho (STY) _AFLAELEQNS(ph)PK_ AFLAELEQNS(1)PK AFLAELEQNS(136.3)PK 0 0 1 0 H0Y390;H3BPE1;H3BQK9;Q9UPN3 H0Y390 H0Y390 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 717.8411 2 713.834332 1425.65411 NaN NaN NaN -0.83308 -0.00059468 NaN NaN NaN NaN 102.63 1.2616 102.63 101.98 103.24 0 0 0 0 7.2781E-44 1 58967 136.3 66.209 1 NaN NaN 0 15221000 0 15221000 133 846 73 79 206 206 1455 AFLAELEQNSPK 12 1 0 Phospho (STY) _AFLAELEQNS(ph)PK_ AFLAELEQNS(1)PK AFLAELEQNS(56.56)PK 0 0 1 0 H0Y390;H3BPE1;H3BQK9;Q9UPN3 H0Y390 H0Y390 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 713.8362 2 713.834332 1425.65411 NaN NaN NaN NaN NaN NaN NaN NaN NaN 106.65 1 106.65 106.15 107.15 0 0 0 0 0.00089703 1 68594 56.563 35.661 1 134 846 73 79 207 207 1455 AFMESPK 7 1 0 Phospho (STY) _AFMES(ph)PK_ AFMES(1)PK AFMES(51.45)PK 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 449.1873 2 445.179904 888.345256 NaN NaN NaN 0.080832 3.5985E-05 NaN NaN NaN NaN 43.574 0.31912 43.574 43.434 43.753 0 0 0 0 0.022939 1 25736 51.445 25.886 1 NaN NaN 0 1732300 0 1732300 135 994 74 80 208 208 1770 AFMGTPVQK 9 1 0 Oxidation (M) _AFM(ox)GTPVQK_ AFM(1)GTPVQK AFM(77.92)GTPVQK 0 1 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 501.7624 2 497.754953 993.495352 NaN NaN NaN 0.4239 0.000211 NaN NaN NaN NaN 26.686 0.21712 26.686 26.533 26.75 0 0 0 0 0.00052472 1 12769 77.923 41.737 1 NaN NaN 0 2704800 0 2704800 136 994 75 81 209 209 277 AFVEDSEDEDGAGEGGSSLLQK 22 1 0 Phospho (STY) _AFVEDS(ph)EDEDGAGEGGSSLLQK_ AFVEDS(1)EDEDGAGEGGSSLLQK AFVEDS(73.28)EDEDGAGEGGS(-73.28)S(-80.81)LLQK 0 0 1 0 B7ZLF4;A0A024R7C4;B4DUY9;Q8N9T8;H0YFD2;F8WFC1 B7ZLF4 B7ZLF4 KRI1;FLJ12949 Protein KRI1 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1160.9802 2 1160.47866 2318.94276 56233.18 0.56948 0.00066087 -0.20591 -0.00023895 0.36358 0.00042192 1160.97985837038 1164.98698841661 92.653 1.5478 92.653 91.86 93.407 0 1041 134 11 0 0 0 4.7993E-55 4 51540 130.24 118.35 3 0.72474 0.8954 0 499540000 288430000 211120000 137 131 76 82 210;211;212;213 212 195 AFVEDSEDEDGAGEGGSSLLQK 22 1 0 Phospho (STY) _AFVEDS(ph)EDEDGAGEGGSSLLQK_ AFVEDS(1)EDEDGAGEGGSSLLQK AFVEDS(45.04)EDEDGAGEGGS(-45.04)S(-51.84)LLQK 0 0 1 0 B7ZLF4;A0A024R7C4;B4DUY9;Q8N9T8;H0YFD2;F8WFC1 B7ZLF4 B7ZLF4 KRI1;FLJ12949 Protein KRI1 homolog ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1160.9825 2 1160.47866 2318.94276 NaN NaN NaN -0.90503 -0.0010503 NaN NaN NaN NaN 91.729 0.57404 91.729 91.417 91.991 -7.6294E-06 0 0 0 2.7645E-18 1 50773 84.468 74.935 3 NaN NaN 0 14536000 14536000 0 138 131 76 82 214 214 195 AFVEDSEDEDGAGEGGSSLLQK 22 1 0 Phospho (STY) _AFVEDS(ph)EDEDGAGEGGSSLLQK_ AFVEDS(1)EDEDGAGEGGSSLLQK AFVEDS(69)EDEDGAGEGGS(-69)S(-72.86)LLQK 0 0 1 0 B7ZLF4;A0A024R7C4;B4DUY9;Q8N9T8;H0YFD2;F8WFC1 B7ZLF4 B7ZLF4 KRI1;FLJ12949 Protein KRI1 homolog MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1160.9796 2 1160.47866 2318.94276 55241.25 0.59338 0.00068861 -0.23447 -0.0002721 0.35891 0.00041651 1160.97985705359 1164.48555190782 98.483 2.1412 98.483 97.608 99.75 0 1440 200 12 0 0 0 2.894E-24 4 63615 96.673 93.069 3 1.5059 1.0046 0 521150000 211500000 309650000 139 131 76 82 215;216;217;218 217 195 AFVHWYVGEGMEEGEFSEAR 20 0 1 Oxidation (M) _AFVHWYVGEGM(ox)EEGEFSEAR_ AFVHWYVGEGM(1)EEGEFSEAR AFVHWYVGEGM(52.78)EEGEFSEAR 0 1 0 0 B3KT06;B3KPS3;Q53GA7;A8JZY9;F5H5D3;B7Z1K5;Q9BQE3;Q71U36;P68363;B4DN58;Q1ZYQ1;Q13748;B4DDU2;Q9UQM3;B4DQK4;C9J2C0;Q9NY65;Q15670;P68366 B3KT06;P68366 B3KT06 TUBA1C;TUBA1A;TUBA1B;TUBA2;TUBA3C;TUBA8;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3C/D chain;Tubulin alpha-8 chain;Tubulin alpha-4A chain MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 786.0121 3 782.675909 2345.0059 69698.72 1.0353 0.00081029 -0.12077 -9.4525E-05 0.9145 0.00071576 783.010342278927 786.346086382308 126.73 0.44393 126.73 126.47 126.91 7.6294E-06 80 38 4 0 0 0 2.5877E-06 1 76759 52.784 52.784 1 1.6141 1.7781 0 7879200 2823800 5055400 140 437;1024 77 83 219 219 112 AFVHWYVGEGMEEGEFSEAR 20 0 1 Oxidation (M) _AFVHWYVGEGM(ox)EEGEFSEAR_ AFVHWYVGEGM(1)EEGEFSEAR AFVHWYVGEGM(51.49)EEGEFSEAR 0 1 0 0 B3KT06;B3KPS3;Q53GA7;A8JZY9;F5H5D3;B7Z1K5;Q9BQE3;Q71U36;P68363;B4DN58;Q1ZYQ1;Q13748;B4DDU2;Q9UQM3;B4DQK4;C9J2C0;Q9NY65;Q15670;P68366 B3KT06;P68366 B3KT06 TUBA1C;TUBA1A;TUBA1B;TUBA2;TUBA3C;TUBA8;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3C/D chain;Tubulin alpha-8 chain;Tubulin alpha-4A chain MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 786.3461 3 782.675909 2345.0059 69698.69 1.0426 0.00081601 -0.53078 -0.00041542 0.51182 0.00040059 783.010080969932 786.345355905258 127.74 1.2907 127.74 126.81 128.1 -7.6294E-06 315 118 5 0 0 0 5.4412E-06 1 77289 51.487 51.487 1 1.5663 1.8415 0 13717000 3895600 9821800 141 437;1024 77 83 220 220 112 AFVHWYVGEGMEEGEFSEAR 20 0 1 Oxidation (M) _AFVHWYVGEGM(ox)EEGEFSEAR_ AFVHWYVGEGM(1)EEGEFSEAR AFVHWYVGEGM(70.34)EEGEFSEAR 0 1 0 0 B3KT06;B3KPS3;Q53GA7;A8JZY9;F5H5D3;B7Z1K5;Q9BQE3;Q71U36;P68363;B4DN58;Q1ZYQ1;Q13748;B4DDU2;Q9UQM3;B4DQK4;C9J2C0;Q9NY65;Q15670;P68366 B3KT06;P68366 B3KT06 TUBA1C;TUBA1A;TUBA1B;TUBA2;TUBA3C;TUBA8;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3C/D chain;Tubulin alpha-8 chain;Tubulin alpha-4A chain MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 786.347 3 782.675909 2345.0059 69837.27 1.0409 0.00081467 -0.75713 -0.00059259 0.28375 0.00022208 783.010235551119 786.34466454309 128.33 0.65938 128.33 127.98 128.64 0 174 57 6 0 0 0 3.2087E-09 2 77799 70.335 63.775 1 2.5094 2.8781 0 11759000 4248200 7510900 142 437;1024 77 83 221;222 222 112 AFVHWYVGEGMEEGEFSEAR 20 0 1 Oxidation (M) _AFVHWYVGEGM(ox)EEGEFSEAR_ AFVHWYVGEGM(1)EEGEFSEAR AFVHWYVGEGM(75.97)EEGEFSEAR 0 1 0 0 B3KT06;B3KPS3;Q53GA7;A8JZY9;F5H5D3;B7Z1K5;Q9BQE3;Q71U36;P68363;B4DN58;Q1ZYQ1;Q13748;B4DDU2;Q9UQM3;B4DQK4;C9J2C0;Q9NY65;Q15670;P68366 B3KT06;P68366 B3KT06 TUBA1C;TUBA1A;TUBA1B;TUBA2;TUBA3C;TUBA8;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3C/D chain;Tubulin alpha-8 chain;Tubulin alpha-4A chain MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 783.344 3 782.675909 2345.0059 69976.46 0.91318 0.00071473 -0.18317 -0.00014336 0.73002 0.00057137 783.010348077283 786.346052143494 129.72 0.67355 129.72 129.33 130.01 0 272 60 7 0 0 0 1.226E-10 3 78892 75.97 75.97 1 1.5552 1.8332 0 13945000 4611500 9333800 143 437;1024 77 83 223;224;225 224 112 AFVHWYVGEGMEEGEFSEAR 20 0 1 Oxidation (M) _AFVHWYVGEGM(ox)EEGEFSEAR_ AFVHWYVGEGM(1)EEGEFSEAR AFVHWYVGEGM(53.45)EEGEFSEAR 0 1 0 0 B3KT06;B3KPS3;Q53GA7;A8JZY9;F5H5D3;B7Z1K5;Q9BQE3;Q71U36;P68363;B4DN58;Q1ZYQ1;Q13748;B4DDU2;Q9UQM3;B4DQK4;C9J2C0;Q9NY65;Q15670;P68366 B3KT06;P68366 B3KT06 TUBA1C;TUBA1A;TUBA1B;TUBA2;TUBA3C;TUBA8;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3C/D chain;Tubulin alpha-8 chain;Tubulin alpha-4A chain MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 786.344 3 782.675909 2345.0059 69858.85 0.861 0.00067388 -0.72648 -0.0005686 0.13452 0.00010528 783.010403397669 786.344859716124 130.26 0.94737 130.26 129.89 130.84 -1.5259E-05 221 90 6 0 0 0 1.1163E-06 2 79481 53.453 53.453 1 2.2027 2.583 0 13500000 4987400 8512600 144 437;1024 77 83 226;227 227 112 AFVHWYVGEGMEEGEFSEAR 20 0 1 Oxidation (M) _AFVHWYVGEGM(ox)EEGEFSEAR_ AFVHWYVGEGM(1)EEGEFSEAR AFVHWYVGEGM(76.71)EEGEFSEAR 0 1 0 0 B3KT06;B3KPS3;Q53GA7;A8JZY9;F5H5D3;B7Z1K5;Q9BQE3;Q71U36;P68363;B4DN58;Q1ZYQ1;Q13748;B4DDU2;Q9UQM3;B4DQK4;C9J2C0;Q9NY65;Q15670;P68366 B3KT06;P68366 B3KT06 TUBA1C;TUBA1A;TUBA1B;TUBA2;TUBA3C;TUBA8;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3C/D chain;Tubulin alpha-8 chain;Tubulin alpha-4A chain MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 786.3466 3 782.675909 2345.0059 69976.48 0.75176 0.00058839 0.11121 8.7041E-05 0.86297 0.00067543 783.010410080412 786.346512608454 131.5 0.73 131.5 131.07 131.8 1.5259E-05 210 62 5 0 0 0 1.0764E-10 2 79947 76.713 72.362 1 1.7257 2.0349 0 13974000 3137300 10836000 145 437;1024 77 83 228;229 229 112 AFVHWYVGEGMEEGEFSEAR 20 0 1 Oxidation (M) _AFVHWYVGEGM(ox)EEGEFSEAR_ AFVHWYVGEGM(1)EEGEFSEAR AFVHWYVGEGM(68.41)EEGEFSEAR 0 1 0 0 B3KT06;B3KPS3;Q53GA7;A8JZY9;F5H5D3;B7Z1K5;Q9BQE3;Q71U36;P68363;B4DN58;Q1ZYQ1;Q13748;B4DDU2;Q9UQM3;B4DQK4;C9J2C0;Q9NY65;Q15670;P68366 B3KT06;P68366 B3KT06 TUBA1C;TUBA1A;TUBA1B;TUBA2;TUBA3C;TUBA8;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3C/D chain;Tubulin alpha-8 chain;Tubulin alpha-4A chain MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 786.3466 3 782.675909 2345.0059 69698.72 0.69403 0.0005432 -0.13712 -0.00010732 0.55691 0.00043588 783.010139959714 786.346083806833 131.92 0.68587 131.92 131.53 132.21 0 171 61 5 0 0 0 5.7136E-09 4 80413 68.41 61.299 1 1.7016 1.8974 0 9324600 3470800 5853800 146 437;1024 77 83 230;231;232;233 233 112 AFVHWYVGEGMEEGEFSEAR 20 0 1 Oxidation (M) _AFVHWYVGEGM(ox)EEGEFSEAR_ AFVHWYVGEGM(1)EEGEFSEAR AFVHWYVGEGM(117.26)EEGEFSEAR 0 1 0 0 B3KT06;B3KPS3;Q53GA7;A8JZY9;F5H5D3;B7Z1K5;Q9BQE3;Q71U36;P68363;B4DN58;Q1ZYQ1;Q13748;B4DDU2;Q9UQM3;B4DQK4;C9J2C0;Q9NY65;Q15670;P68366 B3KT06;P68366 B3KT06 TUBA1C;TUBA1A;TUBA1B;TUBA2;TUBA3C;TUBA8;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3C/D chain;Tubulin alpha-8 chain;Tubulin alpha-4A chain MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 786.3469 3 782.675909 2345.0059 69536.09 0.60337 0.00047225 -0.23022 -0.00018019 0.37316 0.00029206 783.010125805508 786.346271546704 133 0.668 133 132.57 133.24 0 401 55 11 0 0 0 1.6722E-29 2 80887 117.26 109.43 1 1.6514 2.0784 0 48798000 19325000 29473000 147 437;1024 77 83 234;235 235 112 AFVHWYVGEGMEEGEFSEAR 20 0 1 Oxidation (M) _AFVHWYVGEGM(ox)EEGEFSEAR_ AFVHWYVGEGM(1)EEGEFSEAR AFVHWYVGEGM(75.24)EEGEFSEAR 0 1 0 0 B3KT06;B3KPS3;Q53GA7;A8JZY9;F5H5D3;B7Z1K5;Q9BQE3;Q71U36;P68363;B4DN58;Q1ZYQ1;Q13748;B4DDU2;Q9UQM3;B4DQK4;C9J2C0;Q9NY65;Q15670;P68366 B3KT06;P68366 B3KT06 TUBA1C;TUBA1A;TUBA1B;TUBA2;TUBA3C;TUBA8;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3C/D chain;Tubulin alpha-8 chain;Tubulin alpha-4A chain ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 783.0089 3 782.675909 2345.0059 NaN NaN NaN -0.18506 -0.00014484 NaN NaN NaN NaN 130.51 0.33047 130.51 130.46 130.79 0 0 0 0 1.1446E-11 1 79547 75.239 66.53 1 NaN NaN 0 5271900 5271900 0 148 437;1024 77 83 236 236 112 AFVHWYVGEGMEEGEFSEAR 20 0 1 Oxidation (M) _AFVHWYVGEGM(ox)EEGEFSEAR_ AFVHWYVGEGM(1)EEGEFSEAR AFVHWYVGEGM(49.42)EEGEFSEAR 0 1 0 0 B3KT06;B3KPS3;Q53GA7;A8JZY9;F5H5D3;B7Z1K5;Q9BQE3;Q71U36;P68363;B4DN58;Q1ZYQ1;Q13748;B4DDU2;Q9UQM3;B4DQK4;C9J2C0;Q9NY65;Q15670;P68366 B3KT06;P68366 B3KT06 TUBA1C;TUBA1A;TUBA1B;TUBA2;TUBA3C;TUBA8;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3C/D chain;Tubulin alpha-8 chain;Tubulin alpha-4A chain ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1178.5175 2 1173.51022 2345.0059 NaN NaN NaN 0.63299 0.00074282 NaN NaN NaN NaN 133.01 0.25916 133.01 132.84 133.1 1.5259E-05 0 0 0 5.2595E-05 1 80879 49.423 36.797 1 NaN NaN 0 3639900 0 3639900 149 437;1024 77 83 237 237 112 AFVHWYVGEGMEEGEFSEAR 20 0 1 Oxidation (M) _AFVHWYVGEGM(ox)EEGEFSEAR_ AFVHWYVGEGM(1)EEGEFSEAR AFVHWYVGEGM(51.35)EEGEFSEAR 0 1 0 0 B3KT06;B3KPS3;Q53GA7;A8JZY9;F5H5D3;B7Z1K5;Q9BQE3;Q71U36;P68363;B4DN58;Q1ZYQ1;Q13748;B4DDU2;Q9UQM3;B4DQK4;C9J2C0;Q9NY65;Q15670;P68366 B3KT06;P68366 B3KT06 TUBA1C;TUBA1A;TUBA1B;TUBA2;TUBA3C;TUBA8;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3C/D chain;Tubulin alpha-8 chain;Tubulin alpha-4A chain MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 782.6756 3 782.675909 2345.0059 NaN NaN NaN NaN NaN NaN NaN NaN NaN 130.25 1 130.25 129.75 130.75 0 0 0 0 0.00025752 1 79200 51.348 42.184 1 150 437;1024 77 83 238 238 112 AFVHWYVGEGMEEGEFSEAR 20 0 1 Oxidation (M) _AFVHWYVGEGM(ox)EEGEFSEAR_ AFVHWYVGEGM(1)EEGEFSEAR AFVHWYVGEGM(45.61)EEGEFSEAR 0 1 0 0 B3KT06;B3KPS3;Q53GA7;A8JZY9;F5H5D3;B7Z1K5;Q9BQE3;Q71U36;P68363;B4DN58;Q1ZYQ1;Q13748;B4DDU2;Q9UQM3;B4DQK4;C9J2C0;Q9NY65;Q15670;P68366 B3KT06;P68366 B3KT06 TUBA1C;TUBA1A;TUBA1B;TUBA2;TUBA3C;TUBA8;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3C/D chain;Tubulin alpha-8 chain;Tubulin alpha-4A chain MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 782.676 3 782.675909 2345.0059 NaN NaN NaN NaN NaN NaN NaN NaN NaN 130.51 1 130.51 130.01 131.01 0 0 0 0 0.00049047 1 79380 45.608 36.676 1 151 437;1024 77 83 239 239 112 AFVHWYVGEGMEEGEFSEAR 20 0 1 Oxidation (M) _AFVHWYVGEGM(ox)EEGEFSEAR_ AFVHWYVGEGM(1)EEGEFSEAR AFVHWYVGEGM(61.1)EEGEFSEAR 0 1 0 0 B3KT06;B3KPS3;Q53GA7;A8JZY9;F5H5D3;B7Z1K5;Q9BQE3;Q71U36;P68363;B4DN58;Q1ZYQ1;Q13748;B4DDU2;Q9UQM3;B4DQK4;C9J2C0;Q9NY65;Q15670;P68366 B3KT06;P68366 B3KT06 TUBA1C;TUBA1A;TUBA1B;TUBA2;TUBA3C;TUBA8;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3C/D chain;Tubulin alpha-8 chain;Tubulin alpha-4A chain MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 782.6761 3 782.675909 2345.0059 NaN NaN NaN NaN NaN NaN NaN NaN NaN 132.14 1 132.14 131.64 132.64 0 0 0 0 3.7437E-05 1 80385 61.102 52.394 1 152 437;1024 77 83 240 240 112 AGAGMITQHSSNASPINR 18 0 1 Oxidation (M),Phospho (STY) _AGAGM(ox)ITQHSSNAS(ph)PINR_ AGAGM(1)ITQHSSNASPINR AGAGMIT(0.027)QHS(0.294)S(0.188)NAS(0.491)PINR AGAGM(53.75)ITQHSSNASPINR AGAGMIT(-12.61)QHS(-2.22)S(-4.17)NAS(2.22)PINR 0 1 1 0 A0A024R5X3;Q9NWH9;H7C3F4;A0A024R5U7;H0YKH2 A0A024R5X3 A0A024R5X3 SLTM SAFB-like transcription modulator MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 640.2892 3 636.619168 1906.83567 75753.09 0.58464 0.00037219 -0.00052632 -3.3507E-07 0.58411 0.00037186 636.619290861109 639.955305391126 50.53 1.0996 50.53 50.048 51.147 0 549 89 8 0 0 0 3.6214E-05 1 20204 53.747 46.795 4 0.78748 0.96811 0 28536000 15873000 12663000 153 114 78 84 241 241 22 165;166 AGAGMITQHSSNASPINR 18 0 1 Oxidation (M),Phospho (STY) _AGAGM(ox)ITQHSS(ph)NASPINR_ AGAGM(1)ITQHSSNASPINR AGAGMITQHS(0.113)S(0.56)NAS(0.327)PINR AGAGM(80.75)ITQHSSNASPINR AGAGMIT(-35.06)QHS(-6.97)S(2.34)NAS(-2.34)PINR 0 1 1 0 A0A024R5X3;Q9NWH9;H7C3F4;A0A024R5U7;H0YKH2 A0A024R5X3 A0A024R5X3 SLTM SAFB-like transcription modulator MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 636.6198 3 636.619168 1906.83567 76481.57 0.97551 0.00062103 0.42383 0.00026982 1.3993 0.00089085 636.619134714352 639.955161976718 28.173 0.65762 28.173 27.902 28.56 0 296 46 8 0 0 0 7.8815E-08 2 14119 80.752 67.695 4 1.3806 1.0245 0 22639000 11569000 11070000 154 114 78 84 242;243 243 22 165;166 AGALHAQVER 10 0 1 Unmodified _AGALHAQVER_ 0 0 0 0 Q9BQG0;I3L1L3 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 351.1927 3 351.192957 1050.55704 102090.4 -0.35079 -0.0001232 -0.84251 -0.00029588 -1.1933 -0.00041908 351.192129972577 354.528995450011 66.53 0.59167 66.53 66.206 66.797 0 94 41 5 0 0 0 0.0017442 1 32419 68.76 46.674 1 0.71788 0.90376 0 50885000 28252000 22633000 155 1192 79 85 244 244 AGAPVGGSPGLAK 13 1 0 Phospho (STY) _AGAPVGGS(ph)PGLAK_ AGAPVGGS(1)PGLAK AGAPVGGS(52.1)PGLAK 0 0 1 0 A0A0A0MS59;Q6ZRS2;A0A0C4DFX4 A0A0A0MS59 A0A0A0MS59 SRCAP Helicase SRCAP MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 585.7742 2 581.286821 1160.55909 81535.01 0.82487 0.00047949 0.20965 0.00012187 1.0345 0.00060135 581.286693118815 585.293858202417 56.486 1.0284 56.486 55.89 56.918 0 385 85 7 0 0 0 0.033802 1 24326 52.101 52.101 1 0.72682 0.92189 0 36735000 21114000 15621000 156 292 80 86 245 245 464 AGAPVGGSPGLAK 13 1 0 Phospho (STY) _AGAPVGGS(ph)PGLAK_ AGAPVGGS(1)PGLAK AGAPVGGS(66.71)PGLAK 0 0 1 0 A0A0A0MS59;Q6ZRS2;A0A0C4DFX4 A0A0A0MS59 A0A0A0MS59 SRCAP Helicase SRCAP MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 585.2943 2 581.286821 1160.55909 80732.42 0.55285 0.00032137 0.1699 9.876E-05 0.72275 0.00042013 581.286949010858 585.294035526037 48.755 0.78338 48.755 48.33 49.113 -3.8147E-06 296 72 5 0 0 0 0.0030447 1 29249 66.708 62.298 1 0.95048 0.73603 0 15675000 7117700 8557700 157 292 80 86 246 246 464 AGDLLEDSPK 10 1 0 Phospho (STY) _AGDLLEDS(ph)PK_ AGDLLEDS(1)PK AGDLLEDS(66.71)PK 0 0 1 0 A8K8G0;B7Z958;B2RDE8;B7Z525;P51858 A8K8G0 A8K8G0 HDGF Hepatoma-derived growth factor MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 566.7537 2 562.747194 1123.47984 81673.79 0.88355 0.00049722 -0.63641 -0.00035814 0.24714 0.00013908 562.746726907552 566.753842519435 57.925 0.94449 57.925 57.42 58.365 0 298 85 4 0 0 0 0.0052135 3 35410 66.708 42.678 1 1.4053 1.0967 0 13248000 5549800 7698100 158 492 81 87 247;248;249 247 846 AGDPGEMPQSPTGLGQPK 18 1 0 Oxidation (M),Phospho (STY) _AGDPGEM(ox)PQS(ph)PTGLGQPK_ AGDPGEM(1)PQSPTGLGQPK AGDPGEMPQS(0.927)PT(0.073)GLGQPK AGDPGEM(112.91)PQSPTGLGQPK AGDPGEMPQS(11.02)PT(-11.02)GLGQPK 0 1 1 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9;H0YHL2 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 935.9106 2 931.903148 1861.79174 62898.7 0.80742 0.00075244 -0.22378 -0.00020854 0.58365 0.0005439 931.903104510794 935.910187152284 56.127 1.6045 56.127 55.357 56.961 -3.8147E-06 1046 132 10 0 0 0 2.0606E-23 3 24334 112.91 101.28 2 1.1113 1.3754 0 228390000 113930000 114460000 159 829 82 88 250;251;252 252 224 1425 AGDPGEMPQSPTGLGQPK 18 1 0 Oxidation (M),Phospho (STY) _AGDPGEM(ox)PQS(ph)PTGLGQPK_ AGDPGEM(1)PQSPTGLGQPK AGDPGEMPQS(0.959)PT(0.041)GLGQPK AGDPGEM(127.44)PQSPTGLGQPK AGDPGEMPQS(13.67)PT(-13.67)GLGQPK 0 1 1 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9;H0YHL2 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 932.4052 2 931.903148 1861.79174 61784.7 1.0532 0.00098152 -0.32927 -0.00030684 0.72398 0.00067467 931.902936384298 935.910214108867 52.099 1.8078 52.099 51.25 53.058 0 1208 164 11 0 0 0 7.7109E-32 3 31686 127.44 121.01 2 1.7937 1.1987 0 177260000 66165000 111100000 160 829 82 88 253;254;255 255 224 1425 AGDPGEMPQSPTGLGQPK 18 1 0 Phospho (STY) _AGDPGEMPQS(ph)PTGLGQPK_ AGDPGEMPQS(0.844)PT(0.156)GLGQPK AGDPGEMPQS(7.32)PT(-7.32)GLGQPK 0 0 1 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9;H0YHL2 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 928.4143 2 923.905691 1845.79683 NaN NaN NaN 0.038052 3.5156E-05 NaN NaN NaN NaN 76.07 0.606 76.07 75.782 76.388 0 0 0 0 0.0021346 1 48405 41.412 24.533 2 NaN NaN 0 17289000 0 17289000 161 829 82 89 256 256 1425 AGDRNSEDDGVVMTFSSVK 19 1 1 Oxidation (M),Phospho (STY) _AGDRNS(ph)EDDGVVM(ox)TFSSVK_ AGDRNSEDDGVVM(1)TFSSVK AGDRNS(1)EDDGVVMTFSSVK AGDRNSEDDGVVM(52.27)TFSSVK AGDRNS(37.91)EDDGVVMT(-37.91)FS(-42.98)S(-47.27)VK 0 1 1 1 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1055.4449 2 1055.44337 2108.87218 NaN NaN NaN -0.10572 -0.00011158 NaN NaN NaN NaN 89.714 0.32526 89.714 89.603 89.928 0 0 0 0 1.1407E-05 1 49214 52.265 38.676 4 NaN NaN 0 30535000 30535000 0 162 1223 83 90 257 257 350 2478 AGDRNSEDDGVVMTFSSVK 19 1 1 Oxidation (M),Phospho (STY) _AGDRNS(ph)EDDGVVM(ox)TFSSVK_ AGDRNSEDDGVVM(1)TFSSVK AGDRNS(1)EDDGVVMTFSSVK AGDRNSEDDGVVM(44.71)TFSSVK AGDRNS(36.72)EDDGVVMT(-36.72)FS(-39.73)S(-42.31)VK 0 1 1 1 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 709.9725 3 703.964669 2108.87218 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.243 1 89.243 88.743 89.743 0 0 0 0 0.001189 1 48857 44.711 33.655 4 163 1223 83 90 258 258 350 2478 AGDRNSEDDGVVMTFSSVK 19 1 1 Oxidation (M),Phospho (STY) _AGDRNS(ph)EDDGVVM(ox)TFSSVK_ AGDRNSEDDGVVM(1)TFSSVK AGDRNS(1)EDDGVVMTFSSVK AGDRNSEDDGVVM(45.61)TFSSVK AGDRNS(37.61)EDDGVVMT(-37.61)FS(-43.13)S(-43.21)VK 0 1 1 1 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 709.6383 3 703.964669 2108.87218 72768.97 0.88693 0.00062436 -0.33825 -0.00023811 0.54868 0.00038625 703.964588446366 709.972049205517 88.987 0.27811 88.987 88.864 89.142 7.6294E-06 83 25 5 0 0 0 4.3466E-05 1 48715 45.608 39.486 4 1.2655 1.4577 0 25958000 11223000 14735000 164 1223 83 90 259 259 350 2478 AGEPNSPDAEEANSPDVTAGCDPAGVHPPR 30 0 1 Phospho (STY) _AGEPNS(ph)PDAEEANSPDVTAGCDPAGVHPPR_ AGEPNS(0.991)PDAEEANS(0.009)PDVT(0.001)AGCDPAGVHPPR AGEPNS(20.6)PDAEEANS(-20.6)PDVT(-30.66)AGCDPAGVHPPR 0 0 1 0 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1032.4348 3 1032.09966 3093.27714 59666.22 0.57329 0.00059169 -0.57587 -0.00059436 -0.0025788 -2.6616E-06 1032.76783601852 1035.7689307176 76.541 1.0062 76.541 76.035 77.041 0 484 94 8 0 0 0 3.6361E-11 1 48720 50.705 41.817 3 0.40195 0.27733 0 43848000 31667000 12181000 165 1041 84 91 260 260 1933 AGFAGDDAPR 10 0 1 Unmodified _AGFAGDDAPR_ 0 0 0 0 B4E335;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;P0CG38;C9JUM1;L0R5C4;P0CG39;F8WCH0;B4E3A4;P63261;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;Q6S8J3;A5A3E0;A1E282;B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;Q13707;B3KW67;A8K3K1;Q7Z7J6;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1 B4E335;B4E3A4;B7Z6P1 B4E3A4 PS1TP5BP1;ACTB;POTEI;POTEM;POTEJ;ACTG2;ACTG1;POTEE;POTEF;ACTA2;ACTA1;ACTC1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 488.7281 2 488.727781 975.441008 86108.58 0.15416 7.5344E-05 0.37103 0.00018133 0.5252 0.00025668 488.727863934856 493.732030943337 54.653 1.8209 54.653 53.745 55.566 -3.8147E-06 590 141 7 0 0 0 0.0012986 3 23252 87.308 63.153 1 1.9371 2.441 0 58497000 17910000 40587000 166 683;685;711 85 92 261;262;263 263 AGFNYESPSK 10 1 0 Phospho (STY) _AGFNYES(ph)PSK_ AGFNYES(0.945)PS(0.055)K AGFNY(-55.95)ES(12.38)PS(-12.38)K 0 0 1 0 Q9UHF7;H0YC29;E5RJ97;E7EVN4;F8W8T0 Q9UHF7 Q9UHF7 TRPS1 Zinc finger transcription factor Trps1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 594.2467 2 590.239536 1178.46452 80618.16 0.73398 0.00043322 -0.023414 -1.382E-05 0.71056 0.0004194 590.239504972646 594.24646923916 56.52 1.3229 56.52 55.836 57.158 -3.8147E-06 393 111 5 0 0 0 4.1376E-06 2 24514 106.79 92.023 3 0.7483 0.91937 0 22019000 12283000 9736100 167 1229 86 93 264;265 265 2505 AGFNYESPSK 10 1 0 Phospho (STY) _AGFNYES(ph)PSK_ AGFNYES(0.816)PS(0.184)K AGFNY(-87.73)ES(6.46)PS(-6.46)K 0 0 1 0 Q9UHF7;H0YC29;E5RJ97;E7EVN4;F8W8T0 Q9UHF7 Q9UHF7 TRPS1 Zinc finger transcription factor Trps1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 594.2473 2 590.239536 1178.46452 79921.12 0.75941 0.00044823 0.11065 6.5313E-05 0.87006 0.00051355 590.239547933679 594.246747184446 47.709 0.97967 47.709 47.24 48.22 0 387 91 6 0 0 0 8.6454E-22 1 28580 151.55 130.17 3 1.72 1.1196 0 40327000 14642000 25685000 168 1229 86 93 266 266 2505 AGGLDWPEATEVSPSR 16 0 1 Phospho (STY) _AGGLDWPEATEVS(ph)PSR_ AGGLDWPEAT(0.345)EVS(0.526)PS(0.129)R AGGLDWPEAT(-1.84)EVS(1.84)PS(-6.11)R 0 0 1 0 E9PJR7;E9PRW6;E9PKC4;E9PK71;Q9Y446 E9PJR7 E9PJR7 PKP3 Plakophilin-3 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 876.3898 2 876.385449 1750.75634 NaN NaN NaN 0.056912 4.9877E-05 NaN NaN NaN NaN 103.51 1.0522 103.51 102.99 104.05 0 0 0 0 1.7295E-10 1 59591 89.484 50.06 3 NaN NaN 0 12848000 12848000 0 169 807 87 94 267 267 1388 AGGPATPLSPTR 12 0 1 Phospho (STY) _AGGPATPLS(ph)PTR_ AGGPAT(0.014)PLS(0.782)PT(0.204)R AGGPAT(-17.38)PLS(5.84)PT(-5.84)R 0 0 1 0 Q03252 Q03252 Q03252 LMNB2 Lamin-B2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 602.7899 2 602.789727 1203.5649 78714.05 1.1274 0.00067957 0.059477 3.5852E-05 1.1869 0.00071542 602.789600844781 607.794260095082 51.956 1.0534 51.956 51.38 52.434 0 315 95 5 0 0 0 0.00053893 2 31319 82.202 74.132 3 0.51719 0.41076 0 13131000 8117900 5012600 170 1036 88 95 268;269 268 1928 AGGPTTPLSPTR 12 0 1 2 Phospho (STY) _AGGPTT(ph)PLS(ph)PTR_ AGGPT(0.406)T(0.594)PLS(0.845)PT(0.155)R AGGPT(-1.73)T(1.73)PLS(7.59)PT(-7.59)R 0 0 2 0 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;A0A0D9SFY5 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 657.7784 2 657.778175 1313.5418 75093.88 0.5644 0.00037125 0.15991 0.00010519 0.72431 0.00047644 657.778024248607 662.782409220887 53.072 1.5415 53.072 52.179 53.72 0 537 126 7 0 0 0 0.007766 1 21941 48.527 38.522 6 0.54102 0.67144 0 35547000 23450000 12097000 171 972 89 96 270 270 1724;2880 AGGPTTPLSPTR 12 0 1 Phospho (STY) _AGGPTTPLS(ph)PTR_ AGGPT(0.002)T(0.069)PLS(0.753)PT(0.176)R AGGPT(-25.78)T(-10.36)PLS(6.31)PT(-6.31)R 0 0 1 0 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;A0A0D9SFY5 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 617.7953 2 617.79501 1233.57547 78665.54 0.68519 0.0004233 0.010066 6.2185E-06 0.69525 0.00042952 617.795008601556 622.798919488398 60.038 1.3683 60.038 59.354 60.723 -3.8147E-06 375 100 6 0 0 0 0.00056878 2 26923 81.904 60.456 4 0.78525 0.98879 0 52465000 29311000 23155000 172 972 89 97 271;272 271 1724;2880 AGGPTTPLSPTR 12 0 1 Phospho (STY) _AGGPTTPLS(ph)PTR_ AGGPT(0.001)T(0.017)PLS(0.854)PT(0.128)R AGGPT(-28.68)T(-16.91)PLS(8.25)PT(-8.25)R 0 0 1 0 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;A0A0D9SFY5 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 622.7997 2 617.79501 1233.57547 76810.91 1.0371 0.00064072 -0.080185 -4.9538E-05 0.95692 0.00059118 617.794892118601 622.799055605415 52.438 1.3836 52.438 51.884 53.268 0 610 125 6 0 0 0 0.0080945 1 32079 55.213 50.762 4 0.92977 0.65278 0 33930000 17194000 16736000 173 972 89 97 273 273 1724;2880 AGGSGGAGVTLDEAR 15 0 1 Phospho (STY) _AGGS(ph)GGAGVTLDEAR_ AGGS(1)GGAGVTLDEAR AGGS(46.38)GGAGVT(-46.38)LDEAR 0 0 1 0 Q9ULI0;C9JG15 Q9ULI0 Q9ULI0 ATAD2B ATPase family AAA domain-containing protein 2B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 699.3063 2 699.30647 1396.59839 72667.95 0.95362 0.00066687 0.25544 0.00017863 1.2091 0.00084551 699.306799641884 704.310205305253 60.11 0.77762 60.11 59.784 60.562 3.8147E-06 134 52 5 0 0 0 0.0010976 1 27091 57.288 52.837 2 0.80334 0.92985 0 12449000 6711700 5737200 174 1237 90 98 274 274 2531 AGGSGGAGVTLDEAR 15 0 1 Phospho (STY) _AGGS(ph)GGAGVTLDEAR_ AGGS(0.998)GGAGVT(0.002)LDEAR AGGS(26.52)GGAGVT(-26.52)LDEAR 0 0 1 0 Q9ULI0;C9JG15 Q9ULI0 Q9ULI0 ATAD2B ATPase family AAA domain-containing protein 2B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 704.3134 2 699.30647 1396.59839 72416.41 1.09 0.00076224 0.0050045 3.4997E-06 1.095 0.00076574 699.306671719365 704.310400186473 54.16 0.93829 54.16 53.647 54.586 0 275 79 5 0 0 0 0.0018459 1 32920 43.454 39.437 2 0.87857 0.69636 0 9898200 4126000 5772300 175 1237 90 98 275 275 2531 AGKLSPLK 8 2 0 Phospho (STY) _AGKLS(ph)PLK_ AGKLS(1)PLK AGKLS(63.4)PLK 0 0 1 1 Q03164;E9PR05;Q9UPD0;Q9Y6P1;H0YNL8;D3DW85;A0A0A6YY96 Q03164 Q03164 KMT2A;MLL;IREB2 Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 455.2606 2 447.246436 892.478319 90551.42 0.20239 9.0518E-05 -0.10186 -4.5559E-05 0.10052 4.4959E-05 447.24634515408 455.260485848507 28.505 0.47591 28.505 28.299 28.775 0 153 31 8 0 0 0 0.0080671 1 14228 63.401 30.043 1 1.7589 1.3209 0 74674000 28537000 46137000 176 1034 91 99 276 276 1879 AGLESGAEPGDGDSDTTK 18 1 0 Phospho (STY) _AGLESGAEPGDGDSDT(ph)TK_ AGLESGAEPGDGDS(0.22)DT(0.39)T(0.39)K AGLES(-115.69)GAEPGDGDS(-2.48)DT(0)T(0)K 0 0 1 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 897.8621 2 893.854375 1785.6942 64139 0.79908 0.00071426 0.000142 1.2692E-07 0.79922 0.00071439 893.854361858863 897.861380243862 44.227 1.1944 44.227 43.64 44.834 0 578 87 9 0 0 0 1.6509E-37 2 16492 136.34 116.29 4 0.7296 0.88555 0 17734000 10387000 7347200 177 931 92 100 277;278 278 1580;1581;2846;2847 AGLESGAEPGDGDSDTTK 18 1 0 Phospho (STY) _AGLESGAEPGDGDS(ph)DTTK_ AGLESGAEPGDGDS(0.557)DT(0.237)T(0.206)K AGLES(-137.62)GAEPGDGDS(3.7)DT(-3.7)T(-4.32)K 0 0 1 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 893.856 2 893.854375 1785.6942 63729.83 0.82566 0.00073802 -0.080828 -7.2248E-05 0.74483 0.00066577 893.854699684725 897.86129607359 45.524 1.78 45.524 44.698 46.478 -3.8147E-06 1098 127 12 0 0 0 1.6952E-87 4 17251 179.1 134.17 4 0.75981 0.9387 0 508220000 287040000 221180000 178 931 92 100 279;280;281;282 281 1580;1581;2846;2847 AGLESGAEPGDGDSDTTK 18 1 0 Phospho (STY) _AGLESGAEPGDGDSDTT(ph)K_ AGLESGAEPGDGDS(0.201)DT(0.344)T(0.455)K AGLES(-46.77)GAEPGDGDS(-3.54)DT(-1.22)T(1.22)K 0 0 1 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 894.3588 2 893.854375 1785.6942 64978.36 0.62062 0.00055475 1.1399 0.0010189 1.7605 0.0015736 893.855033902455 897.862086019887 24.164 0.26705 24.164 24.011 24.278 0 80 15 7 0 0 0 5.6002E-05 2 10502 55.589 42.47 4 0.71238 0.50281 0 22341000 12703000 9638100 179 931 92 100 283;284 283 1580;1581;2846;2847 AGLESGAEPGDGDSDTTK 18 1 0 Phospho (STY) _AGLESGAEPGDGDS(ph)DTTK_ AGLESGAEPGDGDS(0.333)DT(0.333)T(0.333)K AGLES(-44.53)GAEPGDGDS(0)DT(0)T(0)K 0 0 1 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 897.8624 2 893.854375 1785.6942 64419.58 0.9785 0.00087464 0.45045 0.00040263 1.4289 0.0012773 893.854756552472 897.861886129005 36.562 0.67101 36.562 36.198 36.869 0 345 56 7 0 0 0 6.937E-05 1 20527 50.653 43.283 4 0.70753 0.46471 0 54499000 28619000 25881000 180 931 92 100 285 285 1580;1581;2846;2847 AGLESGAEPGDGDSDTTK 18 1 0 Phospho (STY) _AGLESGAEPGDGDSDTT(ph)K_ AGLESGAEPGDGDS(0.177)DT(0.301)T(0.522)K AGLES(-99.31)GAEPGDGDS(-4.69)DT(-2.38)T(2.38)K 0 0 1 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 897.8626 2 893.854375 1785.6942 63733.56 0.94727 0.00084672 0.11347 0.00010143 1.0607 0.00094815 893.855147846293 897.86145753558 37.282 1.8267 37.282 36.833 38.66 0 1274 161 13 0 0 0 3.9514E-30 3 21113 119.68 94.013 4 0.77609 0.51671 0 1746700000 988340000 758310000 181 931 92 100 286;287;288 287 1580;1581;2846;2847 AGLESGAEPGDGDSDTTK 18 1 0 2 Phospho (STY) _AGLES(ph)GAEPGDGDS(ph)DTTK_ AGLES(1)GAEPGDGDS(0.661)DT(0.158)T(0.181)K AGLES(42.51)GAEPGDGDS(5.64)DT(-6.22)T(-5.64)K 0 0 2 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 934.3389 2 933.83754 1865.66053 63409.79 0.83393 0.00077875 -0.10197 -9.5219E-05 0.73196 0.00068353 933.838029830853 937.845007427214 46.765 0.88369 46.765 46.29 47.174 0 291 59 6 0 0 0 0.00013045 1 17860 45.221 34.115 6 0.80048 0.94933 0 8318900 4655400 3663600 182 931 92 101 289 289 1580;1581;2846;2847 AGLESGAEPGDGDSDTTKK 19 2 0 Phospho (STY) _AGLESGAEPGDGDS(ph)DTTKK_ AGLESGAEPGDGDS(0.747)DT(0.126)T(0.126)KK AGLES(-76.35)GAEPGDGDS(7.71)DT(-7.71)T(-7.71)KK 0 0 1 1 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 966.4183 2 957.901857 1913.78916 61983.08 0.66695 0.00063887 -0.17266 -0.0001654 0.49428 0.00047348 957.901852688033 965.915998877152 47.719 1.3512 47.719 46.947 48.298 0 597 93 10 0 0 0 6.1251E-18 2 18600 97.579 97.579 4 0.7083 0.89408 0 59864000 35622000 24242000 183 931 93 102 290;291 291 1580;1581;2846;2847 AGLESGAEPGDGDSDTTKK 19 2 0 Phospho (STY) _AGLESGAEPGDGDS(ph)DTTKK_ AGLESGAEPGDGDS(0.577)DT(0.211)T(0.211)KK AGLES(-39.37)GAEPGDGDS(4.36)DT(-4.36)T(-4.36)KK 0 0 1 1 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 957.9001 2 957.901857 1913.78916 62363.06 0.60745 0.00058187 -1.1382 -0.0010902 -0.53072 -0.00050837 957.900720088669 965.914916313479 25.183 0.31478 25.183 24.96 25.275 0 57 16 5 0 0 0 4.8174E-05 1 11440 45.083 35.667 4 0.5961 0.46366 0 39540000 21368000 18171000 184 931 93 102 292 292 1580;1581;2846;2847 AGLGSPERPPK 11 1 1 Phospho (STY) _AGLGS(ph)PERPPK_ AGLGS(1)PERPPK AGLGS(47.19)PERPPK 0 0 1 1 Q6ZW18;Q9H6F5;H0YG79 Q6ZW18;Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 402.8711 3 396.863939 1187.56999 93629.91 -0.53807 -0.00021354 0.4431 0.00017585 -0.094968 -3.7689E-05 396.864082818866 402.871534366801 54.055 0.66096 54.055 53.451 54.112 0 292 51 9 0 0 0 0.0050236 1 22548 47.189 37.137 1 0.7789 0.93327 0 130070000 77953000 52119000 185 1207;1129 94 103 293 293 2152 AGLGSPERPPK 11 1 1 Phospho (STY) _AGLGS(ph)PERPPK_ AGLGS(1)PERPPK AGLGS(126.76)PERPPK 0 0 1 1 Q6ZW18;Q9H6F5;H0YG79 Q6ZW18;Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 603.8037 2 594.79227 1187.56999 78207.33 0.49999 0.00029739 0.24048 0.00014304 0.74048 0.00044043 594.792477999922 603.803573778999 54.67 2.5877 54.67 53.345 55.933 0 1008 207 6 0 0 0 4.8587E-11 4 23370 126.76 103.39 1 0.70839 0.8624 0 441870000 250210000 191660000 186 1207;1129 94 103 294;295;296;297 296 2152 AGLGSPERPPK 11 1 1 Phospho (STY) _AGLGS(ph)PERPPK_ AGLGS(1)PERPPK AGLGS(63.76)PERPPK 0 0 1 1 Q6ZW18;Q9H6F5;H0YG79 Q6ZW18;Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 402.8713 3 396.863939 1187.56999 93696.45 -0.49207 -0.00019528 0.59897 0.00023771 0.1069 4.2423E-05 396.86418969883 402.871577553118 54.59 1.3834 54.59 54.097 55.481 0 281 108 5 0 0 0 0.0026542 2 23069 63.76 50.972 1 0.6846 0.82907 0 295040000 120910000 174130000 187 1207;1129 94 103 298;299 299 2152 AGLGSPERPPK 11 1 1 Phospho (STY) _AGLGS(ph)PERPPK_ AGLGS(1)PERPPK AGLGS(45.79)PERPPK 0 0 1 1 Q6ZW18;Q9H6F5;H0YG79 Q6ZW18;Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 396.8639 3 396.863939 1187.56999 NaN NaN NaN 0.32472 0.00012887 NaN NaN NaN NaN 54.696 0.94126 54.696 54.636 55.578 0 0 0 0 0.0067726 1 23491 45.79 33.924 1 NaN NaN 0 130660000 130660000 0 188 1207;1129 94 103 300 300 2152 AGLGSPERPPK 11 1 1 Phospho (STY) _AGLGS(ph)PERPPK_ AGLGS(1)PERPPK AGLGS(60.16)PERPPK 0 0 1 1 Q6ZW18;Q9H6F5;H0YG79 Q6ZW18;Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 402.8713 3 396.863939 1187.56999 92850.74 0.23928 9.4961E-05 -0.21123 -8.3829E-05 0.02805 1.1132E-05 396.863903379808 402.87132341415 26.438 0.80839 26.438 26.002 26.811 0 248 38 9 0 0 0 0.003029 1 12287 60.157 50.645 1 0.6045 0.46723 0 207280000 128970000 78313000 189 1207;1129 94 103 301 301 2152 AGLGSPERPPK 11 1 1 Phospho (STY) _AGLGS(ph)PERPPK_ AGLGS(1)PERPPK AGLGS(135.02)PERPPK 0 0 1 1 Q6ZW18;Q9H6F5;H0YG79 Q6ZW18;Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 603.8044 2 594.79227 1187.56999 77535.5 0.94039 0.00055934 -0.35301 -0.00020997 0.58738 0.00034937 594.792461345629 603.803165952005 26.426 1.3005 26.426 25.921 27.221 0 428 70 10 0 0 0 2.8655E-14 1 12317 135.02 115.5 1 0.60588 0.46968 0 1166500000 722150000 444320000 190 1207;1129 94 103 302 302 2152 AGLGSPERPPKTSPGSPR 18 1 2 3 Phospho (STY) _AGLGS(ph)PERPPKT(ph)SPGS(ph)PR_ AGLGS(0.997)PERPPKT(0.548)S(0.548)PGS(0.908)PR AGLGS(22.15)PERPPKT(0)S(0)PGS(6.9)PR 0 0 3 2 Q6ZW18;Q9H6F5;H0YG79 Q6ZW18;Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1015.9294 2 1015.92852 2029.84249 60570.16 0.1372 0.00013939 0.36935 0.00037523 0.50655 0.00051462 1015.92914570018 1029.94418904497 54.472 2.4754 54.472 53.482 55.958 0 1427 196 12 0 0 0 2.1639E-06 2 23045 55.007 41.324 4 0.6792 0.82326 0 823290000 493570000 329720000 191 1207;1129 95 104 303;304 304 2152;2153;2154;2959 AGLGSPERPPKTSPGSPR 18 1 2 3 Phospho (STY) _AGLGS(ph)PERPPKT(ph)SPGS(ph)PR_ AGLGS(1)PERPPKT(0.529)S(0.529)PGS(0.942)PR AGLGS(36.04)PERPPKT(0)S(0)PGS(9.13)PR 0 0 3 2 Q6ZW18;Q9H6F5;H0YG79 Q6ZW18;Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 677.6235 3 677.621438 2029.84249 72654.89 0.46534 0.00031532 0.014068 9.5327E-06 0.47941 0.00032486 677.622929904341 686.965050567981 54.456 3.0069 54.456 53.306 56.312 0 2196 241 14 0 0 0 1.381E-06 1 22943 59.912 50.254 4 0.67473 0.83817 0 3302800000 1997900000 1304900000 192 1207;1129 95 104 305 305 2152;2153;2154;2959 AGLGSPERPPKTSPGSPR 18 1 2 3 Phospho (STY) _AGLGS(ph)PERPPKTS(ph)PGS(ph)PR_ AGLGS(0.999)PERPPKT(0.109)S(0.893)PGS(0.998)PR AGLGS(29.42)PERPPKT(-9.22)S(9.22)PGS(27.02)PR 0 0 3 2 Q6ZW18;Q9H6F5;H0YG79 Q6ZW18;Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1015.9291 2 1015.92852 2029.84249 59601.44 0.16866 0.00017135 0.42466 0.00043143 0.59333 0.00060278 1015.92937000472 1029.94406698451 48.056 3.8463 48.056 46.059 49.906 0 2644 362 13 0 0 0 1.0704E-08 2 29311 79.341 79.341 4 0.49072 0.38952 0 2467500000 1693500000 773990000 193 1207;1129 95 104 306;307 307 2152;2153;2154;2959 AGLGSPERPPKTSPGSPR 18 1 2 3 Phospho (STY) _AGLGS(ph)PERPPKT(ph)SPGS(ph)PR_ AGLGS(0.999)PERPPKT(0.544)S(0.544)PGS(0.913)PR AGLGS(29)PERPPKT(0)S(0)PGS(7.21)PR 0 0 3 2 Q6ZW18;Q9H6F5;H0YG79 Q6ZW18;Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 508.7189 4 508.467898 2029.84249 84021.2 0.42479 0.00021599 0.0068515 3.4837E-06 0.43164 0.00021947 508.467944483313 515.475600580824 48.041 1.8474 48.041 47.128 48.976 0 1073 172 10 0 0 0 7.0154E-07 1 28850 69.99 58.49 4 0.47779 0.42052 0 157860000 105970000 51882000 194 1207;1129 95 104 308 308 2152;2153;2154;2959 AGLGSPERPPKTSPGSPR 18 1 2 2 Phospho (STY) _AGLGS(ph)PERPPKT(ph)SPGSPR_ AGLGS(0.997)PERPPKT(0.524)S(0.469)PGS(0.01)PR AGLGS(23.5)PERPPKT(0.48)S(-0.48)PGS(-17.48)PR 0 0 2 2 Q6ZW18;Q9H6F5;H0YG79 Q6ZW18;Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 650.9661 3 650.965995 1949.87616 74877.04 0.73809 0.00048047 -0.2708 -0.00017628 0.4673 0.00030419 650.965638172701 660.309641072504 58.412 1.1387 58.412 57.862 59 0 579 92 10 0 0 0 3.9285E-06 1 26149 53.747 40.806 6 0.40238 0.47194 0 128000000 91311000 36692000 195 1207;1129 95 105 309 309 2152;2153;2154;2959 AGLGSPERPPKTSPGSPR 18 1 2 2 Phospho (STY) _AGLGSPERPPKTS(ph)PGS(ph)PR_ AGLGS(0.071)PERPPKT(0.453)S(0.498)PGS(0.979)PR AGLGS(-8.72)PERPPKT(-0.43)S(0.43)PGS(15.1)PR 0 0 2 2 Q6ZW18;Q9H6F5;H0YG79 Q6ZW18;Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 650.9667 3 650.965995 1949.87616 NaN NaN NaN NaN NaN NaN NaN NaN NaN 37.078 1 37.078 36.578 37.578 0 0 0 0 0.0012653 1 21084 43.175 32.388 6 196 1207;1129 95 105 310 310 2152;2153;2154;2959 AGLGSPERPPKTSPGSPR 18 1 2 Phospho (STY) _AGLGSPERPPKT(ph)SPGSPR_ AGLGS(0.041)PERPPKT(0.465)S(0.465)PGS(0.029)PR AGLGS(-10.54)PERPPKT(0)S(0)PGS(-11.99)PR 0 0 1 2 Q6ZW18;Q9H6F5;H0YG79 Q6ZW18;Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 624.311 3 624.310552 1869.90983 77941.34 0.86768 0.0005417 -0.03461 -2.1607E-05 0.83307 0.0005201 624.644807909157 633.65415789109 29.763 1.34 29.763 29.212 30.552 0 411 96 6 0 0 0 6.9548E-05 1 15616 43.611 30.184 4 0.11898 0.11321 0 19814000 16995000 2819400 197 1207;1129 95 106 311 311 2152;2153;2154;2959 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 0 A3KPC7;A0A024RAS2;Q08AJ9;B2R5B3;A4FTV9;A0A024R017;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q93077;Q7L7L0;Q6FI13;P20671;P0C0S8;P04908;B2R5B6;Q96QV6;P16104;V9GZN0;Q71UI9;P0C0S5;C9J0D1;Q8IUE6 A3KPC7;Q71UI9;Q8IUE6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AB;HIST1H2AK;HIST1H2AC;HIST1H2AJ;HIST2H2AC;HIST3H2A;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AA;H2AFX;H2AFV;H2AFZ;HIST2H2AB Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E;Histone H2A type 1-A;Histone H2AX;Histone H2A.V;Histone H2A.Z;Histone H2A type 2-B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 472.7702 2 472.769252 943.52395 88061.09 0.77526 0.00036652 0.10116 4.7826E-05 0.87642 0.00041434 472.769243134746 477.773338253685 96.911 1.6546 96.911 96.651 98.305 7.6294E-06 517 137 10 0 0 0 0.00016681 2 54698 114.78 65.424 1 0.72414 0.91644 0 369770000 206040000 163730000 198 961;22;1142 96 107 312;313 312 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 0 A3KPC7;A0A024RAS2;Q08AJ9;B2R5B3;A4FTV9;A0A024R017;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q93077;Q7L7L0;Q6FI13;P20671;P0C0S8;P04908;B2R5B6;Q96QV6;P16104;V9GZN0;Q71UI9;P0C0S5;C9J0D1;Q8IUE6 A3KPC7;Q71UI9;Q8IUE6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AB;HIST1H2AK;HIST1H2AC;HIST1H2AJ;HIST2H2AC;HIST3H2A;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AA;H2AFX;H2AFV;H2AFZ;HIST2H2AB Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E;Histone H2A type 1-A;Histone H2AX;Histone H2A.V;Histone H2A.Z;Histone H2A type 2-B ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 472.7697 2 472.769252 943.52395 NaN NaN NaN 0.049661 2.3478E-05 NaN NaN NaN NaN 97.493 0.80746 97.493 97.448 98.256 -7.6294E-06 0 0 0 0.017 1 55279 53.351 18.544 1 NaN NaN 0 117430000 117430000 0 199 961;22;1142 96 107 314 314 AGLQFPVGR 9 0 1 Unmodified _AGLQFPVGR_ 0 0 0 0 A3KPC7;A0A024RAS2;Q08AJ9;B2R5B3;A4FTV9;A0A024R017;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q93077;Q7L7L0;Q6FI13;P20671;P0C0S8;P04908;B2R5B6;Q96QV6;P16104;V9GZN0;Q71UI9;P0C0S5;C9J0D1;Q8IUE6 A3KPC7;Q71UI9;Q8IUE6 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AB;HIST1H2AK;HIST1H2AC;HIST1H2AJ;HIST2H2AC;HIST3H2A;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AA;H2AFX;H2AFV;H2AFZ;HIST2H2AB Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E;Histone H2A type 1-A;Histone H2AX;Histone H2A.V;Histone H2A.Z;Histone H2A type 2-B ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 472.7698 2 472.769252 943.52395 NaN NaN NaN 0.058658 2.7732E-05 NaN NaN NaN NaN 88.099 0.98216 88.099 87.894 88.877 0 0 0 0 0.0034643 1 56752 70.69 26.573 1 NaN NaN 0 6161800 6161800 0 200 961;22;1142 96 107 315 315 AGLSEEDDSLVDVYYR 16 0 1 Phospho (STY) _AGLSEEDDS(ph)LVDVYYR_ AGLSEEDDS(1)LVDVYYR AGLS(-98.95)EEDDS(76.81)LVDVY(-76.81)Y(-86.15)R 0 0 1 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 955.9067 2 955.906411 1909.79827 61973.91 0.53892 0.00051516 0.17994 0.00017201 0.71886 0.00068717 955.906337379476 960.910780509731 109.93 1.2878 109.93 109.54 110.83 -7.6294E-06 523 104 9 0 0 0 4.6948E-51 4 64590 150.59 136.03 4 0.95662 1.2087 0 146250000 74861000 71388000 201 1061 97 108 316;317;318;319 317 1994 AGLSEEDDSLVDVYYR 16 0 1 Phospho (STY) _AGLSEEDDS(ph)LVDVYYR_ AGLSEEDDS(1)LVDVYYR AGLS(-37.58)EEDDS(37.58)LVDVY(-49.94)Y(-52.88)R 0 0 1 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 955.9079 2 955.906411 1909.79827 62315.56 0.92302 0.00088232 -0.76381 -0.00073013 0.15922 0.0001522 956.407011541428 960.909847684262 116.89 1.0922 116.89 116.47 117.56 -7.6294E-06 720 104 12 0 0 0 0.00011641 2 75265 58.83 58.83 4 1.4911 0.9932 0 156950000 64198000 92750000 202 1061 97 108 320;321 321 1994 AGMSSNQSISSPVLDAVPR 19 0 1 Oxidation (M),Phospho (STY) _AGM(ox)SSNQSISS(ph)PVLDAVPR_ AGM(1)SSNQSISSPVLDAVPR AGMSSNQSIS(0.145)S(0.855)PVLDAVPR AGM(126.25)SSNQSISSPVLDAVPR AGMS(-74.47)S(-74.47)NQS(-37.26)IS(-7.72)S(7.72)PVLDAVPR 0 1 1 0 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1011.4675 2 1006.46136 2010.90817 60767.64 0.52559 0.00052899 0.21839 0.0002198 0.74398 0.00074879 1006.46169612818 1011.96706855991 105.01 0.86806 105.01 104.55 105.42 0 305 59 6 0 0 0 6.6786E-37 1 60702 126.25 109.31 5 1.1156 1.4067 0 63598000 30466000 33132000 203 383 98 109 322 322 92 602;603;604 AGMSSNQSISSPVLDAVPR 19 0 1 Oxidation (M),2 Phospho (STY) _AGM(ox)SSNQS(ph)IS(ph)SPVLDAVPR_ AGM(1)SSNQSISSPVLDAVPR AGMS(0.113)S(0.125)NQS(0.731)IS(0.547)S(0.483)PVLDAVPR AGM(56.85)SSNQSISSPVLDAVPR AGMS(-9.1)S(-8.54)NQS(7.43)IS(0.64)S(-0.64)PVLDAVPR 0 1 2 0 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1051.452 2 1046.44453 2090.8745 NaN NaN NaN -0.71058 -0.00074359 NaN NaN NaN NaN 110.8 0.36272 110.8 110.56 110.92 -7.6294E-06 0 0 0 1.4219E-06 1 65391 56.851 45.946 10 NaN NaN 0 9596600 0 9596600 204 383 98 110 323 323 92 602;603;604 AGNALTPELAPVQIK 15 1 0 Phospho (STY) _AGNALT(ph)PELAPVQIK_ AGNALT(1)PELAPVQIK AGNALT(117)PELAPVQIK 0 0 1 0 A0A024R4Q5;P0C1Z6 A0A024R4Q5 A0A024R4Q5 TFPT TCF3 fusion partner MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 805.4249 2 801.418563 1600.82257 68436.23 1.0639 0.00085262 0.01777 1.4241E-05 1.0817 0.00086686 801.418658709897 805.425175903015 112.55 0.58481 112.55 112.23 112.81 -7.6294E-06 254 54 6 0 0 0 1.8461E-17 2 66699 117 102.32 1 0.60502 0.76789 0 39519000 23081000 16438000 205 90 99 111 324;325 325 2631 AGNALTPELAPVQIK 15 1 0 Phospho (STY) _AGNALT(ph)PELAPVQIK_ AGNALT(1)PELAPVQIK AGNALT(62.86)PELAPVQIK 0 0 1 0 A0A024R4Q5;P0C1Z6 A0A024R4Q5 A0A024R4Q5 TFPT TCF3 fusion partner MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 805.4262 2 801.418563 1600.82257 69513.83 1.2739 0.0010209 0.089509 7.1734E-05 1.3634 0.0010927 801.418831182001 805.425550688111 119.42 0.80401 119.42 119 119.81 -7.6294E-06 357 70 7 0 0 0 0.0078425 2 76936 62.861 62.861 1 0.96941 0.67905 0 22952000 12448000 10504000 206 90 99 111 326;327 326 2631 AGNLGGGVVTIER 13 0 1 Unmodified _AGNLGGGVVTIER_ 0 0 0 0 K7EJT5;K7EP65;K7EKS7;K7ELC4;K7EMH1;K7ERI7;Q7Z4W8;P35268 K7EJT5 K7EJT5 RPL22 60S ribosomal protein L22 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 626.8492 2 621.843676 1241.6728 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.279 1 75.279 74.779 75.779 -7.6294E-06 0 0 0 0.016299 1 47898 42.031 23.251 1 207 902 100 112 328 328 AGPGDRDPPTRGEESR 16 0 3 Unmodified _AGPGDRDPPTRGEESR_ 0 0 0 2 P51116 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 432.4616 4 424.955395 1695.79247 91081.1 0.057506 2.4437E-05 -0.057282 -2.4342E-05 0.00022352 9.4985E-08 424.955446997196 432.461516971287 63.9 0.75052 63.9 63.467 64.217 0 231 54 6 0 0 0 0.00021114 3 30006 42.338 42.338 1 1.3547 1.5756 0 43184000 13731000 29453000 208 1003 101 113 329;330;331 331 AGQEPSPKPGTDVIPAAPR 19 1 1 Phospho (STY) _AGQEPS(ph)PKPGTDVIPAAPR_ AGQEPS(0.918)PKPGT(0.082)DVIPAAPR AGQEPS(10.5)PKPGT(-10.5)DVIPAAPR 0 0 1 1 Q4VC44;I3L0R3;I3L231 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 662.6659 3 656.657728 1966.95136 74791.91 0.97055 0.00063732 -0.14048 -9.2247E-05 0.83008 0.00054508 656.657583571603 662.665055396146 80.861 1.5624 80.861 80.111 81.673 0 798 145 7 0 0 0 1.4071E-17 6 42908 92.426 92.426 2 0.9355 1.1203 0 124300000 64817000 59478000 209 1086 102 114 332;333;334;335;336;337 334 2047 AGQEPSPKPGTDVIPAAPR 19 1 1 Phospho (STY) _AGQEPS(ph)PKPGTDVIPAAPR_ AGQEPS(1)PKPGTDVIPAAPR AGQEPS(34.55)PKPGT(-34.55)DVIPAAPR 0 0 1 1 Q4VC44;I3L0R3;I3L231 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 984.4833 2 984.482954 1966.95136 63748.29 0.58601 0.00057692 -0.099959 -9.8408E-05 0.48605 0.00047851 984.984696739656 993.995040851688 80.803 1.2431 80.803 80.197 81.441 0 478 115 6 0 0 0 4.3246E-10 1 42844 77.468 67.719 2 0.81774 0.96756 0 49414000 24597000 24817000 210 1086 102 114 338 338 2047 AGQEPSPKPGTDVIPAAPR 19 1 1 Phospho (STY) _AGQEPS(ph)PKPGTDVIPAAPR_ AGQEPS(0.99)PKPGT(0.01)DVIPAAPR AGQEPS(19.75)PKPGT(-19.75)DVIPAAPR 0 0 1 1 Q4VC44;I3L0R3;I3L231 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 663.0002 3 656.657728 1966.95136 73599.76 1.274 0.00083661 -0.43769 -0.00028742 0.83634 0.00054919 656.991775214202 662.664993582611 76.607 1.3855 76.607 76.131 77.516 0 1031 130 11 0 0 0 1.4828E-08 3 48647 67.827 63.656 2 1.186 0.9171 0 265330000 122670000 142670000 211 1086 102 114 339;340;341 339 2047 AGQEPSPKPGTDVIPAAPR 19 1 1 Phospho (STY) _AGQEPS(ph)PKPGTDVIPAAPR_ AGQEPS(0.993)PKPGT(0.007)DVIPAAPR AGQEPS(21.36)PKPGT(-21.36)DVIPAAPR 0 0 1 1 Q4VC44;I3L0R3;I3L231 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 993.4943 2 984.482954 1966.95136 60965.23 0.60683 0.00059742 0.41567 0.00040922 1.0225 0.0010066 984.98466557751 993.494436732226 76.546 1.2296 76.546 76.185 77.415 -7.6294E-06 721 116 8 0 0 0 8.6277E-05 1 48711 45.237 39.395 2 1.2098 0.9346 0 151520000 67114000 84407000 212 1086 102 114 342 342 2047 AGQVVTIWAAGAGATHSPPTDLVWK 25 1 0 Unmodified _AGQVVTIWAAGAGATHSPPTDLVWK_ 0 0 0 0 P02545;W8QEH3;Q5TCI8;A0A0C4DGC5;B4DFR3 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 845.1132 3 845.111446 2532.31251 66197.66 0.58059 0.00049067 0.82759 0.0006994 1.4082 0.0011901 845.447283777501 848.117436037035 133.23 0.099152 133.23 133.18 133.28 0 20 6 6 0 0 0 0.026411 1 81090 14.234 14.234 1 1.1491 1.3617 0 5561600 2994800 2566800 213 954 103 115 343 343 AGSQLGPGYQHHAQPK 16 1 0 Unmodified _AGSQLGPGYQHHAQPK_ 0 0 0 0 H7BYN4;Q02241 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 559.2823 3 559.281494 1674.82265 86697.19 0.77127 0.00043136 -0.42065 -0.00023526 0.35063 0.0001961 559.28144517735 561.952633981357 76.722 0.53227 76.722 76.48 77.012 0 104 44 5 0 0 0 0.022095 2 39755 21.841 21.841 1 0.63571 0.76254 0 14747000 9445800 5300800 214 879 104 116 344;345 344 AGTDSPVSCASVTEER 16 0 1 Phospho (STY) _AGTDS(ph)PVSCASVTEER_ AGT(0.023)DS(0.977)PVSCASVTEER AGT(-16.35)DS(16.35)PVS(-48.19)CAS(-66.64)VT(-78.36)EER 0 0 1 0 E9PEI0;Q69YH5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 878.3622 2 873.356031 1744.69751 64025.07 0.68922 0.00060193 -0.079916 -6.9796E-05 0.6093 0.00053213 873.356234471955 878.360318072214 57.163 1.1375 57.163 56.526 57.664 0 539 94 8 0 0 0 2.1958E-12 3 25090 99.451 88.011 5 0.4506 0.56782 0 58235000 37918000 20317000 215 799 105 117 346;347;348 347 1371 AGTDSPVSCASVTEER 16 0 1 Phospho (STY) _AGTDS(ph)PVSCASVTEER_ AGT(0.076)DS(0.924)PVSCASVTEER AGT(-10.83)DS(10.83)PVS(-41.47)CAS(-62.85)VT(-68.5)EER 0 0 1 0 E9PEI0;Q69YH5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 878.361 2 873.356031 1744.69751 64390.1 1.0166 0.00088789 -0.24945 -0.00021786 0.76718 0.00067003 873.356198303346 878.360136314015 54.072 1.3417 54.072 53.401 54.743 0 995 113 12 0 0 0 1.4246E-06 3 33116 78.244 64.841 5 1.6782 1.1044 0 285970000 106450000 179510000 216 799 105 117 349;350;351 350 1371 AGVLAHLEEER 11 0 1 Unmodified _AGVLAHLEEER_ 0 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;P35580 A0A024R1N1 A0A024R1N1 MYH9;MYH10 Myosin-9;Myosin-10 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 617.3295 2 612.322576 1222.6306 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.07 1 103.07 102.57 103.57 7.6294E-06 0 0 0 0.0052398 1 59486 54.608 36.744 1 217 49 106 118 352 352 AGVVNGTGAPGQSPGAGR 18 0 1 Phospho (STY) _AGVVNGTGAPGQS(ph)PGAGR_ AGVVNGT(0.01)GAPGQS(0.99)PGAGR AGVVNGT(-19.85)GAPGQS(19.85)PGAGR 0 0 1 0 Q59FW1;H0Y4T7;A0A024R6P5;E7ESY4;Q13330 Q59FW1 Q59FW1 MTA1 Metastasis-associated protein MTA1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 821.8829 2 816.878125 1631.7417 67790.77 0.86761 0.00070873 0.049131 4.0134E-05 0.91674 0.00074887 816.878150986093 821.882234734235 45.716 1.0621 45.716 45.155 46.217 0 468 77 9 0 0 0 7.9312E-45 2 17141 145.91 127.65 2 0.6407 0.80694 0 54066000 32422000 21643000 218 124 107 119 353;354 354 183 AGVVNGTGAPGQSPGAGR 18 0 1 Phospho (STY) _AGVVNGTGAPGQS(ph)PGAGR_ AGVVNGT(0.002)GAPGQS(0.998)PGAGR AGVVNGT(-28.15)GAPGQS(28.15)PGAGR 0 0 1 0 Q59FW1;H0Y4T7;A0A024R6P5;E7ESY4;Q13330 Q59FW1 Q59FW1 MTA1 Metastasis-associated protein MTA1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 821.883 2 816.878125 1631.7417 67320.38 0.92122 0.00075253 0.21847 0.00017847 1.1397 0.00093099 816.878417032039 821.882485570527 36.392 0.85891 36.392 35.941 36.8 0 408 70 9 0 0 0 2.2848E-06 1 20408 67.995 61.414 2 1.4351 0.96301 0 108720000 44172000 64548000 219 124 107 119 355 355 183 AGYSTDESSSSSLHATR 17 0 1 Unmodified _AGYSTDESSSSSLHATR_ 0 0 0 0 P51116 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 585.9316 3 585.930855 1754.77073 78188.14 0.79908 0.00046821 0.70634 0.00041387 1.5054 0.00088207 585.931300533503 589.26748216769 61.208 0.55402 61.208 60.904 61.458 0 143 42 5 0 0 0 0.0034461 1 27984 30.945 26.554 1 1.3027 1.5604 0 17233000 7207300 10026000 220 1003 108 120 356 356 AGYSTDESSSSSLHATR 17 0 1 2 Phospho (STY) _AGY(ph)ST(ph)DESSSSSLHATR_ AGY(0.562)S(0.562)T(0.85)DES(0.013)S(0.006)S(0.003)S(0.003)S(0.001)LHATR AGY(0)S(0)T(4.97)DES(-20.69)S(-25.2)S(-29.36)S(-29.36)S(-33.11)LHAT(-40.23)R 0 0 2 0 P51116 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 963.3646 2 958.358974 1914.7034 62978.52 0.58967 0.00056511 0.34684 0.0003324 0.9365 0.00089751 958.359286894645 963.363604130629 37.172 0.57594 37.172 36.891 37.467 0 230 49 7 0 0 0 0.00059518 1 21079 41.422 37.568 36 1.8163 1.3766 0 19308000 6649400 12659000 221 1003 108 121 357 357 1826;2900;3024 AHFNAMFQPSSPTR 14 0 1 Oxidation (M),Phospho (STY) _AHFNAM(ox)FQPSS(ph)PTR_ AHFNAM(1)FQPSSPTR AHFNAMFQPS(0.075)S(0.851)PT(0.075)R AHFNAM(164.7)FQPSSPTR AHFNAMFQPS(-10.57)S(10.57)PT(-10.57)R 0 1 1 0 Q53SY8;H0Y4Q6;Q8WUA4 Q53SY8 Q53SY8 GTF3C2 General transcription factor 3C polypeptide 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 848.863 2 843.858347 1685.70214 63871.51 0.70887 0.00059818 -0.12227 -0.00010318 0.58659 0.000495 843.858172298883 848.861949630494 78.521 1.382 78.521 77.96 79.342 0 601 121 6 0 0 0 2.8595E-51 4 41448 164.7 150.61 3 0.95672 1.2074 0 77499000 37112000 40387000 222 849 109 122 358;359;360;361 360 230 1458;1459 AHFNAMFQPSSPTR 14 0 1 Oxidation (M),Phospho (STY) _AHFNAM(ox)FQPSS(ph)PTR_ AHFNAM(1)FQPSSPTR AHFNAMFQPS(0.203)S(0.593)PT(0.203)R AHFNAM(44.66)FQPSSPTR AHFNAMFQPS(-4.65)S(4.65)PT(-4.65)R 0 1 1 0 Q53SY8;H0Y4Q6;Q8WUA4 Q53SY8 Q53SY8 GTF3C2 General transcription factor 3C polypeptide 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 566.2445 3 562.90799 1685.70214 80356.48 0.712 0.00040079 -0.30291 -0.00017051 0.40909 0.00023028 562.907777015354 566.243998336939 78.537 1.3785 78.537 77.931 79.31 -7.6294E-06 593 121 7 0 0 0 0.011113 1 41379 44.662 39.209 3 1.0721 1.3532 0 82029000 40353000 41675000 223 849 109 122 362 362 230 1458;1459 AHFNAMFQPSSPTR 14 0 1 Oxidation (M),Phospho (STY) _AHFNAM(ox)FQPS(ph)SPTR_ AHFNAM(1)FQPSSPTR AHFNAMFQPS(0.601)S(0.329)PT(0.07)R AHFNAM(58.83)FQPSSPTR AHFNAMFQPS(2.62)S(-2.62)PT(-9.37)R 0 1 1 0 Q53SY8;H0Y4Q6;Q8WUA4 Q53SY8 Q53SY8 GTF3C2 General transcription factor 3C polypeptide 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 562.9087 3 562.90799 1685.70214 78417.7 0.5986 0.00033696 -0.006016 -3.3865E-06 0.59258 0.00033357 562.907963634677 566.244095352105 62.396 2.2157 62.396 61.378 63.594 0 895 207 6 0 0 0 0.0095957 2 38651 58.83 51.421 3 1.0905 0.76482 0 34454000 16791000 17663000 224 849 109 122 363;364 363 230 1458;1459 AHFNAMFQPSSPTR 14 0 1 Oxidation (M),Phospho (STY) _AHFNAM(ox)FQPS(ph)SPTR_ AHFNAM(1)FQPSSPTR AHFNAMFQPS(0.488)S(0.488)PT(0.023)R AHFNAM(122.33)FQPSSPTR AHFNAMFQPS(0)S(0)PT(-13.25)R 0 1 1 0 Q53SY8;H0Y4Q6;Q8WUA4 Q53SY8 Q53SY8 GTF3C2 General transcription factor 3C polypeptide 2 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 848.8638 2 843.858347 1685.70214 NaN NaN NaN 0.16016 0.00013515 NaN NaN NaN NaN 62.323 2.3482 62.323 61.425 63.773 0 0 0 0 1.2171E-26 2 39193 122.33 105.66 3 NaN NaN 0 30979000 0 30979000 225 849 109 122 365;366 366 230 1458;1459 AHGLSLIPSTGLCSPDLVNR 20 0 1 Phospho (STY) _AHGLSLIPSTGLCS(ph)PDLVNR_ AHGLSLIPS(0.036)T(0.036)GLCS(0.928)PDLVNR AHGLS(-34.96)LIPS(-14.1)T(-14.1)GLCS(14.1)PDLVNR 0 0 1 0 A0A0H3W5T2;B4DNC7;A8K5K3;O75030 A0A0H3W5T2 A0A0H3W5T2 MITF Microphthalmia-associated transcription factor MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 729.694 3 729.692444 2186.0555 72527.25 1.1052 0.00080647 -0.55406 -0.00040429 0.55117 0.00040218 730.02623388898 733.028374234135 126.83 0.72926 126.83 126.36 127.09 7.6294E-06 171 64 5 0 0 0 1.9373E-05 1 76887 47.082 47.082 4 0.9768 1.085 0 8839600 4205800 4633800 226 340 110 123 367 367 534 AHGLSLIPSTGLCSPDLVNR 20 0 1 Phospho (STY) _AHGLSLIPSTGLCS(ph)PDLVNR_ AHGLSLIPS(0.034)T(0.034)GLCS(0.932)PDLVNR AHGLS(-33.17)LIPS(-14.42)T(-14.42)GLCS(14.42)PDLVNR 0 0 1 0 A0A0H3W5T2;B4DNC7;A8K5K3;O75030 A0A0H3W5T2 A0A0H3W5T2 MITF Microphthalmia-associated transcription factor MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 729.6927 3 729.692444 2186.0555 NaN NaN NaN NaN NaN NaN NaN NaN NaN 126.31 1 126.31 125.81 126.81 7.6294E-06 0 0 0 0.0022298 1 76574 41.257 24.858 4 227 340 110 123 368 368 534 AHLGTALK 8 1 0 Unmodified _AHLGTALK_ 0 0 0 0 A8K517;P62266;D6RD47;D6RDJ2;D6RIX0;D6R9I7 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 405.7455 2 405.745245 809.475937 93155.82 -0.0012237 -4.9652E-07 0.14806 6.0076E-05 0.14684 5.958E-05 405.745274434231 409.752260704997 80.787 1.6974 80.787 80.261 81.959 -7.6294E-06 813 156 8 0 0 0 0.0095442 4 43168 116.88 39.677 1 0.7886 0.97339 0 768910000 422130000 346790000 228 469 111 124 369;370;371;372 371 AHLGTALK 8 1 0 Unmodified _AHLGTALK_ 0 0 0 0 A8K517;P62266;D6RD47;D6RDJ2;D6RIX0;D6R9I7 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 409.7521 2 405.745245 809.475937 92616.23 -0.084789 -3.4403E-05 0.17098 6.9372E-05 0.086186 3.4969E-05 405.745260653955 409.752293276095 20.919 0.60098 20.919 20.708 21.309 1.9073E-06 131 28 8 0 0 0 0.019718 1 7711 75.213 17.932 1 1.6792 1.1121 0 70042000 26945000 43096000 229 469 111 124 373 373 AHLMEIQVNGGTVAEK 16 1 0 Oxidation (M) _AHLM(ox)EIQVNGGTVAEK_ AHLM(1)EIQVNGGTVAEK AHLM(78.33)EIQVNGGTVAEK 0 1 0 0 B3KS36;P39023;Q8TBW1;Q96QL0;H7C3M2;H7C422;Q9NY85;G5E9G0;Q49AJ9;B5MCW2;Q9BT63 B3KS36 B3KS36 RPL3;rpl3 60S ribosomal protein L3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 574.2977 3 571.62605 1711.85632 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.356 1 89.356 88.856 89.856 0 0 0 0 1.0032E-07 1 48944 78.326 64.417 1 230 597 112 125 374 374 150 AHLMEIQVNGGTVAEK 16 1 0 Oxidation (M) _AHLM(ox)EIQVNGGTVAEK_ AHLM(1)EIQVNGGTVAEK AHLM(94.12)EIQVNGGTVAEK 0 1 0 0 B3KS36;P39023;Q8TBW1;Q96QL0;H7C3M2;H7C422;Q9NY85;G5E9G0;Q49AJ9;B5MCW2;Q9BT63 B3KS36 B3KS36 RPL3;rpl3 60S ribosomal protein L3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 860.9437 2 856.935436 1711.85632 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.584 1 89.584 89.084 90.084 0 0 0 0 1.4637E-05 1 49125 94.122 79.149 1 231 597 112 125 375 375 150 AHLMEIQVNGGTVAEK 16 1 0 Oxidation (M) _AHLM(ox)EIQVNGGTVAEK_ AHLM(1)EIQVNGGTVAEK AHLM(75.91)EIQVNGGTVAEK 0 1 0 0 B3KS36;P39023;Q8TBW1;Q96QL0;H7C3M2;H7C422;Q9NY85;G5E9G0;Q49AJ9;B5MCW2;Q9BT63 B3KS36 B3KS36 RPL3;rpl3 60S ribosomal protein L3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 574.2977 3 571.62605 1711.85632 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.137 1 90.137 89.637 90.637 0 0 0 0 5.6579E-08 1 49542 75.911 64.118 1 232 597 112 125 376 376 150 AHQVVEDGYEFFAK 14 1 0 Unmodified _AHQVVEDGYEFFAK_ 0 0 0 0 E9PMD7;A0A140VJS9;B3KXM2;P62136;Q9UPN1;B7ZB67;B4DJ75;F8VYE8;V9HW04;P62140;C4TNW6;B4DNE3;A0A024RBP2;F8W0W8;P36873 E9PMD7;B4DNE3 B4DNE3 PPP1CA;PPP1CC;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 549.935 3 547.263217 1638.76782 82325.23 0.51661 0.00028272 -0.094762 -5.186E-05 0.42185 0.00023086 547.26323398897 549.934604150404 121.42 0.82994 121.42 121.17 122 0 236 63 5 0 0 0 2.5457E-12 3 73249 85.457 78.98 1 1.2005 1.4791 0 22883000 10176000 12707000 233 201;378 113 126 377;378;379 379 AHQVVEDGYEFFAK 14 1 0 Unmodified _AHQVVEDGYEFFAK_ 0 0 0 0 E9PMD7;A0A140VJS9;B3KXM2;P62136;Q9UPN1;B7ZB67;B4DJ75;F8VYE8;V9HW04;P62140;C4TNW6;B4DNE3;A0A024RBP2;F8W0W8;P36873 E9PMD7;B4DNE3 B4DNE3 PPP1CA;PPP1CC;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 824.3984 2 820.391187 1638.76782 68405.95 0.77969 0.00063965 -0.3415 -0.00028016 0.43819 0.00035949 820.390710390775 824.398160098998 121.42 0.81091 121.42 121.15 121.96 7.6294E-06 245 62 6 0 0 0 3.9425E-23 2 73328 127.17 109.7 1 1.1203 1.3712 0 20005000 10045000 9959800 234 201;378 113 126 380;381 380 AHQVVEDGYEFFAK 14 1 0 Unmodified _AHQVVEDGYEFFAK_ 0 0 0 0 E9PMD7;A0A140VJS9;B3KXM2;P62136;Q9UPN1;B7ZB67;B4DJ75;F8VYE8;V9HW04;P62140;C4TNW6;B4DNE3;A0A024RBP2;F8W0W8;P36873 E9PMD7;B4DNE3 B4DNE3 PPP1CA;PPP1CC;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 820.3922 2 820.391187 1638.76782 68401.52 0.84326 0.0006918 0.21453 0.000176 1.0578 0.0008678 820.391212858339 824.398069501956 122.96 1.7402 122.96 122.06 123.8 7.6294E-06 330 145 4 0 0 0 8.5798E-08 2 74155 108.56 100.15 1 1.2806 1.5207 0 11270000 5509400 5760200 235 201;378 113 126 382;383 382 AHQVVEDGYEFFAK 14 1 0 Unmodified _AHQVVEDGYEFFAK_ 0 0 0 0 E9PMD7;A0A140VJS9;B3KXM2;P62136;Q9UPN1;B7ZB67;B4DJ75;F8VYE8;V9HW04;P62140;C4TNW6;B4DNE3;A0A024RBP2;F8W0W8;P36873 E9PMD7;B4DNE3 B4DNE3 PPP1CA;PPP1CC;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 550.2694 3 547.263217 1638.76782 82486.09 0.66251 0.00036257 -0.16315 -8.9288E-05 0.49936 0.00027328 547.262941213916 550.268873481499 123.82 0.41148 123.82 123.65 124.06 0 83 36 4 0 0 0 0.001022 2 75063 50.155 46.551 1 1.2839 1.5222 0 6594900 2866700 3728100 236 201;378 113 126 384;385 385 AHQVVEDGYEFFAK 14 1 0 Unmodified _AHQVVEDGYEFFAK_ 0 0 0 0 E9PMD7;A0A140VJS9;B3KXM2;P62136;Q9UPN1;B7ZB67;B4DJ75;F8VYE8;V9HW04;P62140;C4TNW6;B4DNE3;A0A024RBP2;F8W0W8;P36873 E9PMD7;B4DNE3 B4DNE3 PPP1CA;PPP1CC;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 824.4 2 820.391187 1638.76782 NaN NaN NaN 0.24097 0.00019769 NaN NaN NaN NaN 123.98 0.18161 123.98 123.94 124.12 7.6294E-06 0 0 0 0.00081363 1 75136 69.721 51.409 1 NaN NaN 0 2354300 0 2354300 237 201;378 113 126 386 386 AHQVVEDGYEFFAK 14 1 0 Unmodified _AHQVVEDGYEFFAK_ 0 0 0 0 E9PMD7;A0A140VJS9;B3KXM2;P62136;Q9UPN1;B7ZB67;B4DJ75;F8VYE8;V9HW04;P62140;C4TNW6;B4DNE3;A0A024RBP2;F8W0W8;P36873 E9PMD7;B4DNE3 B4DNE3 PPP1CA;PPP1CC;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 547.2632 3 547.263217 1638.76782 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.98 1 121.98 121.48 122.48 0 0 0 0 0.0013392 1 73711 67.964 56.171 1 238 201;378 113 126 387 387 AHQVVEDGYEFFAK 14 1 0 Unmodified _AHQVVEDGYEFFAK_ 0 0 0 0 E9PMD7;A0A140VJS9;B3KXM2;P62136;Q9UPN1;B7ZB67;B4DJ75;F8VYE8;V9HW04;P62140;C4TNW6;B4DNE3;A0A024RBP2;F8W0W8;P36873 E9PMD7;B4DNE3 B4DNE3 PPP1CA;PPP1CC;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 549.9351 3 547.263217 1638.76782 NaN NaN NaN NaN NaN NaN NaN NaN NaN 122.15 1 122.15 121.65 122.65 0 0 0 0 0.0032506 1 73826 103.85 90.136 1 239 201;378 113 126 388 388 AHQVVEDGYEFFAK 14 1 0 Unmodified _AHQVVEDGYEFFAK_ 0 0 0 0 E9PMD7;A0A140VJS9;B3KXM2;P62136;Q9UPN1;B7ZB67;B4DJ75;F8VYE8;V9HW04;P62140;C4TNW6;B4DNE3;A0A024RBP2;F8W0W8;P36873 E9PMD7;B4DNE3 B4DNE3 PPP1CA;PPP1CC;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 549.9341 3 547.263217 1638.76782 NaN NaN NaN NaN NaN NaN NaN NaN NaN 122.91 1 122.91 122.41 123.41 0 0 0 0 0.0048945 1 74366 92.939 79.803 1 240 201;378 113 126 389 389 AHQVVEDGYEFFAK 14 1 0 Unmodified _AHQVVEDGYEFFAK_ 0 0 0 0 E9PMD7;A0A140VJS9;B3KXM2;P62136;Q9UPN1;B7ZB67;B4DJ75;F8VYE8;V9HW04;P62140;C4TNW6;B4DNE3;A0A024RBP2;F8W0W8;P36873 E9PMD7;B4DNE3 B4DNE3 PPP1CA;PPP1CC;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 820.3906 2 820.391187 1638.76782 NaN NaN NaN NaN NaN NaN NaN NaN NaN 123.41 1 123.41 122.91 123.91 7.6294E-06 0 0 0 1.8224E-06 1 74709 66.595 39.497 1 241 201;378 113 126 390 390 AHQVVEDGYEFFAK 14 1 0 Unmodified _AHQVVEDGYEFFAK_ 0 0 0 0 E9PMD7;A0A140VJS9;B3KXM2;P62136;Q9UPN1;B7ZB67;B4DJ75;F8VYE8;V9HW04;P62140;C4TNW6;B4DNE3;A0A024RBP2;F8W0W8;P36873 E9PMD7;B4DNE3 B4DNE3 PPP1CA;PPP1CC;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 824.3745 2 820.391187 1638.76782 68421.48 0.80052 0.00065674 -0.23792 -0.00019519 0.56261 0.00046156 820.391762894051 824.398359882504 122 0.2902 122 121.87 122.16 0 62 19 5 0 0 0 1.2217E-06 1 73754 86.313 86.313 1 0.87548 1.0382 0 7854200 4665500 3188700 242 201;378 113 126 391 391 AHQVVEDGYEFFAK 14 1 0 Unmodified _AHQVVEDGYEFFAK_ 0 0 0 0 E9PMD7;A0A140VJS9;B3KXM2;P62136;Q9UPN1;B7ZB67;B4DJ75;F8VYE8;V9HW04;P62140;C4TNW6;B4DNE3;A0A024RBP2;F8W0W8;P36873 E9PMD7;B4DNE3 B4DNE3 PPP1CA;PPP1CC;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 549.9349 3 547.263217 1638.76782 85105.22 0.86697 0.00047446 0.01797 9.8341E-06 0.88494 0.0004843 547.597552511307 549.934515638484 97.832 0.41661 97.832 97.622 98.038 0 151 37 7 0 0 0 8.2054E-05 1 62864 56.527 51.449 1 3.3552 2.642 0 6923500 1672400 5251100 243 201;378 113 126 392 392 AHQVVEDGYEFFAK 14 1 0 Unmodified _AHQVVEDGYEFFAK_ 0 0 0 0 E9PMD7;A0A140VJS9;B3KXM2;P62136;Q9UPN1;B7ZB67;B4DJ75;F8VYE8;V9HW04;P62140;C4TNW6;B4DNE3;A0A024RBP2;F8W0W8;P36873 E9PMD7;B4DNE3 B4DNE3 PPP1CA;PPP1CC;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 547.2634 3 547.263217 1638.76782 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.785 1 97.785 97.285 98.285 0 0 0 0 6.0653E-05 1 62915 64.52 53.25 1 244 201;378 113 126 393 393 AHSSPPEEPGPLK 13 1 0 Phospho (STY) _AHSS(ph)PPEEPGPLK_ AHS(0.288)S(0.712)PPEEPGPLK AHS(-3.93)S(3.93)PPEEPGPLK 0 0 1 0 G3V4W6;G3V2P0;J3KPV9;Q9H972 G3V4W6 G3V4W6 C14orf93 Uncharacterized protein C14orf93 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 713.326 2 713.324131 1424.63371 NaN NaN NaN 0.7171 0.00051152 NaN NaN NaN NaN 37.331 0.8866 37.331 36.951 37.838 0 0 0 0 0.0040061 1 21265 50.914 39.424 2 NaN NaN 0 5099700 5099700 0 245 839 114 127 394 394 1444 AHTPTPGIYMGR 12 0 1 Oxidation (M),Phospho (STY) _AHT(ph)PTPGIYM(ox)GR_ AHTPTPGIYM(1)GR AHT(0.882)PT(0.118)PGIYMGR AHTPTPGIYM(75.68)GR AHT(8.73)PT(-8.73)PGIY(-58.21)MGR 0 1 1 0 Q549U1;Q13595 Q549U1 Q549U1 HSU53209;TRA2A Transformer-2 protein homolog alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 703.812 2 698.807594 1395.60064 74051.9 0.84383 0.00058968 -0.53861 -0.00037639 0.30522 0.00021329 698.807322651474 703.810993483978 64.919 0.35634 64.919 64.737 65.093 0 91 25 5 0 0 0 0.0016183 2 31081 75.683 35.067 3 1.6255 1.9994 0 25494000 10782000 14713000 246 1052 115 128 395;396 396 302 2920 AHVFECNLESSVESIISPK 19 1 0 Phospho (STY) _AHVFECNLESSVESIIS(ph)PK_ AHVFECNLESSVES(0.028)IIS(0.972)PK AHVFECNLES(-56.82)S(-51.75)VES(-15.36)IIS(15.36)PK 0 0 1 0 A0A024R9J0;O60216;E5RJW1;E5RJK5;B3KUT8;E5RFV8;E5RIN7 A0A024R9J0 A0A024R9J0 RAD21 Double-strand-break repair protein rad21 homolog MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 745.6843 3 742.67646 2225.00755 70918.6 1.0159 0.0007545 0.61561 0.0004572 1.6315 0.0012117 743.011358204018 745.682752479821 130.43 0.49634 130.43 130.27 130.76 0 294 47 8 0 0 0 6.3247E-18 2 84123 97.623 97.623 4 1.257 0.83596 0 28718000 12582000 16136000 247 167 116 129 397;398 397 262 AHVTHPELK 9 1 0 Unmodified _AHVTHPELK_ 0 0 0 0 Q5J7U2;O95478 Q5J7U2 Q5J7U2 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 347.1976 3 344.525936 1030.55598 103123.4 0.080068 2.7586E-05 0.44704 0.00015402 0.52711 0.0001816 344.525989067811 347.19737697921 95.547 1.8234 95.547 94.206 96.03 0 646 153 8 0 0 0 0.0035482 3 53587 59.931 48.766 1 1.0121 1.2539 0 142370000 70591000 71776000 248 949 117 130 399;400;401 401 AHYNFK 6 1 0 Acetyl (Protein N-term) _(ac)AHYNFK_ 1 0 0 0 Q53GS0;D2CFK9;Q9BZE4 Q53GS0 Q53GS0 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 411.2007 2 411.20067 820.386788 98252.48 0.040091 1.6485E-05 -0.28311 -0.00011641 -0.24302 -9.9928E-05 411.200649212066 415.207438094018 64.961 0.26561 64.961 64.843 65.108 0 41 18 4 0 0 0 0.025649 1 31127 71.067 48.83 1 1.1399 1.352 0 8951600 4207100 4744500 249 762 118 131 402 402 AIEEGTLEEIEEEVR 15 0 1 Unmodified _AIEEGTLEEIEEEVR_ 0 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;B3KNW7;B4E0F1;B4DSI8;K7EP28 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 873.4152 2 873.425621 1744.83669 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.21 1 117.21 116.71 117.71 0 0 0 0 0.00023761 1 70182 56.225 36.129 1 250 434 119 132 403 403 AIEEGTLEEIEEEVR 15 0 1 Unmodified _AIEEGTLEEIEEEVR_ 0 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;B3KNW7;B4E0F1;B4DSI8;K7EP28 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 878.4303 2 873.425621 1744.83669 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.33 1 117.33 116.83 117.83 7.6294E-06 0 0 0 6.9386E-05 1 70257 61.435 45.182 1 251 434 119 132 404 404 AIEEGTLEEIEEEVR 15 0 1 Unmodified _AIEEGTLEEIEEEVR_ 0 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;B3KNW7;B4E0F1;B4DSI8;K7EP28 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 873.4256 2 873.425621 1744.83669 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.35 1 117.35 116.85 117.85 7.6294E-06 0 0 0 0.014638 1 70268 39.266 22.634 1 252 434 119 132 405 405 AIEEGTLEEIEEEVR 15 0 1 Phospho (STY) _AIEEGT(ph)LEEIEEEVR_ AIEEGT(1)LEEIEEEVR AIEEGT(44.29)LEEIEEEVR 0 0 1 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;B3KNW7;B4E0F1;B4DSI8;K7EP28 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 913.4095 2 913.408786 1824.80302 64211.83 0.99957 0.00091301 0.27272 0.0002491 1.2723 0.0011621 913.408817534994 918.413245999633 126.51 0.40831 126.51 126.29 126.7 0 174 37 7 0 0 0 0.01148 1 81760 44.294 44.294 1 0.30907 0.24597 0 11658000 8493300 3164200 253 434 119 133 406 406 2729 AILGSYDSELTPAEYSPQLTR 21 0 1 Phospho (STY) _AILGSYDSELTPAEYS(ph)PQLTR_ AILGSYDSELT(0.001)PAEY(0.003)S(0.937)PQLT(0.06)R AILGS(-46.36)Y(-46.69)DS(-46.36)ELT(-31.74)PAEY(-24.87)S(11.97)PQLT(-11.97)R 0 0 1 0 C9J9H5;C9JX80;C9JPS1;A4D218;Q9Y6D9 C9J9H5 C9J9H5 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1196.5602 2 1196.05942 2390.10429 NaN NaN NaN 0.35215 0.0004212 NaN NaN NaN NaN 117.29 0.56159 117.29 117 117.56 0 0 0 0 4.8562E-10 1 70132 65.423 44.474 7 NaN NaN 0 20328000 20328000 0 254 416 120 134 407 407 711 AILLPDLSEPNNEPLFSPASEVPRK 25 1 1 Phospho (STY) _AILLPDLSEPNNEPLFS(ph)PASEVPRK_ AILLPDLS(0.301)EPNNEPLFS(0.575)PAS(0.124)EVPRK AILLPDLS(-2.8)EPNNEPLFS(2.8)PAS(-6.66)EVPRK 0 0 1 1 Q8WYP5;B3KRD0;H7C4S1 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 938.4755 3 938.475552 2812.40483 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.33 1 131.33 130.83 131.83 0 0 0 0 0.0031078 1 79887 40.012 9.0536 3 255 1170 121 135 408 408 2282 AIPVSPSAVEEDEDEDGHTVVATAR 25 0 1 Phospho (STY) _AIPVS(ph)PSAVEEDEDEDGHTVVATAR_ AIPVS(0.87)PS(0.129)AVEEDEDEDGHTVVATAR AIPVS(8.28)PS(-8.28)AVEEDEDEDGHT(-36.44)VVAT(-41.71)AR 0 0 1 0 H0Y3R8;B4DZK4;Q68DX9;A0A087X0K9;Q6MZU1;G5E9E7;A9CQZ8;G3V1L9;Q07157 H0Y3R8 H0Y3R8 TJP1;DKFZp686M05161;DKFZp686A1195 Tight junction protein ZO-1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 895.7343 3 892.06751 2673.1807 64934.48 0.80262 0.00071599 -0.55758 -0.0004974 0.24505 0.0002186 892.401364661337 895.73737208923 99.192 0.60589 99.192 98.87 99.476 0 243 53 6 0 0 0 5.1204E-09 1 56460 48.374 33.085 4 0.84689 1.0479 0 34058000 18178000 15880000 256 268 122 136 409 409 427 AISSYFVSTMSSSIK 15 1 0 Oxidation (M) _AISSYFVSTM(ox)SSSIK_ AISSYFVSTM(1)SSSIK AISSYFVSTM(59.57)SSSIK 0 1 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 816.4058 2 812.400363 1622.78617 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.903 1 98.903 98.403 99.403 7.6294E-06 0 0 0 9.7162E-05 1 56298 59.57 34.715 1 257 935 123 137 410 410 253 AISSYFVSTMSSSIK 15 1 0 Oxidation (M) _AISSYFVSTM(ox)SSSIK_ AISSYFVSTM(1)SSSIK AISSYFVSTM(72.53)SSSIK 0 1 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 812.3986 2 812.400363 1622.78617 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.949 1 98.949 98.449 99.449 -7.6294E-06 0 0 0 1.3494E-07 1 56335 72.531 53.288 1 258 935 123 137 411 411 253 AISSYFVSTMSSSIK 15 1 0 Oxidation (M) _AISSYFVSTM(ox)SSSIK_ AISSYFVSTM(1)SSSIK AISSYFVSTM(43.08)SSSIK 0 1 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 812.3601 2 812.400363 1622.78617 67564.67 0.97799 0.00079452 -0.0071821 -5.8347E-06 0.97081 0.00078869 812.901953430685 816.4076862049 99.238 0.69917 99.238 98.886 99.585 -7.6294E-06 186 61 6 0 0 0 0.012746 1 56708 43.084 43.084 1 1.6566 1.993 0 15934000 6484600 9449200 259 935 123 137 412 412 253 AISSYFVSTMSSSIK 15 1 0 Oxidation (M) _AISSYFVSTM(ox)SSSIK_ AISSYFVSTM(1)SSSIK AISSYFVSTM(53.97)SSSIK 0 1 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 812.4002 2 812.400363 1622.78617 67560.2 0.96247 0.00078191 1.4889 0.0012096 2.4514 0.0019915 812.902618873568 816.407355253574 96.146 0.99394 96.146 95.573 96.567 -7.6294E-06 482 98 8 0 0 0 0.0025583 1 61836 53.967 35.221 1 0.99306 0.75907 0 17406000 9565000 7841400 260 935 123 137 413 413 253 AISSYFVSTMSSSIK 15 1 0 Unmodified _AISSYFVSTMSSSIK_ 0 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 808.4108 2 804.402906 1606.79126 70219.27 1.2561 0.0010104 0.25529 0.00020536 1.5114 0.0012158 804.403005952012 808.410530163339 118.41 0.29208 118.41 118.26 118.55 7.6294E-06 95 25 7 0 0 0 0.004151 1 76280 50.207 50.207 1 1.3234 1.1005 0 5523900 2306500 3217400 261 935 123 138 414 414 AITGASLADIMAK 13 1 0 Oxidation (M) _AITGASLADIM(ox)AK_ AITGASLADIM(1)AK AITGASLADIM(55.4)AK 0 1 0 0 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 643.3509 2 639.34212 1276.66969 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.714 1 92.714 92.214 93.214 0 0 0 0 0.00057126 1 51490 55.401 28.886 1 262 745 124 139 415 415 197 AITGASLADIMAK 13 1 0 Oxidation (M) _AITGASLADIM(ox)AK_ AITGASLADIM(1)AK AITGASLADIM(54.47)AK 0 1 0 0 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 639.3415 2 639.34212 1276.66969 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.98 1 92.98 92.48 93.48 -7.6294E-06 0 0 0 0.00062425 1 51698 54.471 27.356 1 263 745 124 139 416 416 197 AITSLLGGGSPK 12 1 0 Phospho (STY) _AITSLLGGGS(ph)PK_ AITSLLGGGS(1)PK AIT(-63.22)S(-42.09)LLGGGS(42.09)PK 0 0 1 0 Q6IEH8;Q6KC79 Q6IEH8 Q6IEH8 NIPBL Nipped-B-like protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 590.8027 2 590.802304 1179.59005 79269.78 1.3004 0.00076827 -0.28584 -0.00016888 1.0145 0.00059939 590.802083655191 594.809249634679 101.53 1.5087 101.53 100.85 102.36 7.6294E-06 597 123 7 0 0 0 1.4127E-19 4 58509 131.35 107.98 3 0.62094 0.76888 0 180050000 113730000 66325000 264 1118 125 140 417;418;419;420 419 2119 AITSLLGGGSPK 12 1 0 Phospho (STY) _AITSLLGGGS(ph)PK_ AITSLLGGGS(1)PK AIT(-71.47)S(-45.66)LLGGGS(45.66)PK 0 0 1 0 Q6IEH8;Q6KC79 Q6IEH8 Q6IEH8 NIPBL Nipped-B-like protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 590.8027 2 590.802304 1179.59005 78779.61 0.96995 0.00057305 -0.071022 -4.196E-05 0.89893 0.00053109 590.802228942021 594.809245873048 104.36 1.747 104.36 103.55 105.3 0 938 169 8 0 0 0 1.3042E-25 4 67197 145.1 119.66 3 0.78237 0.51508 0 58354000 32751000 25603000 265 1118 125 140 421;422;423;424 424 2119 AITSPLAAGSK 11 1 0 Phospho (STY) _AITS(ph)PLAAGSK_ AIT(0.108)S(0.891)PLAAGS(0.001)K AIT(-9.15)S(9.15)PLAAGS(-29.83)K 0 0 1 0 Q2M3X1;B4DSN8;Q9UGU5;Q6PJC1;B0QXZ8;B0QXZ9;Q7Z641;Q6PJ09;Q6P681;Q2T9L2 Q2M3X1 Q2M3X1 HMGXB4 HMG domain-containing protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 548.2759 2 548.275922 1094.53729 83252.1 0.57294 0.00031413 -0.17179 -9.4188E-05 0.40115 0.00021994 548.275816657161 552.282747835491 67.694 0.84116 67.694 67.187 68.028 0 213 72 4 0 0 0 0.00796 1 33180 60.161 34.119 3 1.0445 1.3202 0 31342000 15939000 15403000 266 657 126 141 425 425 1091 AITSPLAAGSK 11 1 0 Phospho (STY) _AITS(ph)PLAAGSK_ AIT(0.081)S(0.918)PLAAGS(0.001)K AIT(-10.52)S(10.52)PLAAGS(-32.48)K 0 0 1 0 Q2M3X1;B4DSN8;Q9UGU5;Q6PJC1;B0QXZ8;B0QXZ9;Q7Z641;Q6PJ09;Q6P681;Q2T9L2 Q2M3X1 Q2M3X1 HMGXB4 HMG domain-containing protein 4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 552.2837 2 548.275922 1094.53729 83221.16 0.74474 0.00040832 0.13579 7.4453E-05 0.88053 0.00048277 548.275802818342 552.283082734076 62.446 1.4569 62.446 61.829 63.286 0 570 139 6 0 0 0 0.0035952 1 38896 70.089 42.076 3 2.5888 1.808 0 23197000 6711400 16486000 267 657 126 141 426 426 1091 AKPTGARPSALDR 13 1 2 Unmodified _AKPTGARPSALDR_ 0 0 0 2 B0UZZ8;A8K9A1;A8K806;O15213;B4DP15;B4DNI0 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 447.2529 3 447.252875 1338.7368 92156.84 0.22033 9.8542E-05 0.28434 0.00012717 0.50467 0.00022572 447.253056622603 456.596343073472 79.936 0.76633 79.936 79.563 80.329 -7.6294E-06 247 70 5 0 0 0 0.015114 1 42283 27.005 17.811 1 0.72366 0.83031 0 36928000 20705000 16223000 268 491 127 142 427 427 ALAAAGYDVEK 11 1 0 Unmodified _ALAAAGYDVEK_ 0 0 0 0 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402;A1L407;P22492;Q02539;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1T;HIST1H1A;HIST1H1C Histone H1.4;Histone H1.3;Histone H1t;Histone H1.1;Histone H1.2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 554.2882 2 554.287671 1106.56079 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.848 1 67.848 67.348 68.348 0 0 0 0 7.357E-05 1 33469 81.338 40.309 1 269 410;967 128 143 428 428 ALAAAGYDVEK 11 1 0 Unmodified _ALAAAGYDVEK_ 0 0 0 0 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402;A1L407;P22492;Q02539;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1T;HIST1H1A;HIST1H1C Histone H1.4;Histone H1.3;Histone H1t;Histone H1.1;Histone H1.2 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 554.7744 2 554.287671 1106.56079 81569.43 0.36894 0.0002045 -0.092865 -5.1474E-05 0.27608 0.00015303 554.287711811494 558.294686813501 68.281 1.9471 68.281 67.643 69.59 0 560 181 6 0 0 0 4.2925E-08 1 34036 94.692 62.757 1 0.87181 1.085 0 76112000 39579000 36532000 270 410;967 128 143 429 429 ALAAAGYDVEK 11 1 0 Unmodified _ALAAAGYDVEK_ 0 0 0 0 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402;A1L407;P22492;Q02539;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1T;HIST1H1A;HIST1H1C Histone H1.4;Histone H1.3;Histone H1t;Histone H1.1;Histone H1.2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 558.2952 2 554.287671 1106.56079 81888.27 0.99261 0.00055019 -0.43085 -0.00023881 0.56177 0.00031138 554.287277030824 558.294520561379 51.71 2.4017 51.71 50.286 52.688 3.8147E-06 676 218 6 0 0 0 0.02481 3 31115 62.201 62.201 1 0.61035 0.40675 0 28346000 17182000 11164000 271 410;967 128 143 430;431;432 430 ALAAGGYDVEK 11 1 0 Unmodified _ALAAGGYDVEK_ 0 0 0 0 P16401 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 551.2872 2 547.279846 1092.54514 82002.26 0.48642 0.00026621 0.13831 7.5693E-05 0.62473 0.0003419 547.279852571135 551.286960670008 65.48 0.88641 65.48 65.093 65.979 0 352 66 8 0 0 0 7.3622E-08 2 31651 102.06 102.06 1 0.5535 0.68533 0 185410000 117930000 67486000 272 966 129 144 433;434 434 ALASNTSFFSGCSPIEEEAH 20 0 0 Phospho (STY) _ALASNTSFFSGCS(ph)PIEEEAH_ ALASNTSFFS(0.105)GCS(0.895)PIEEEAH ALAS(-56.88)NT(-56.88)S(-42.09)FFS(-9.32)GCS(9.32)PIEEEAH 0 0 1 0 Q59HG1;O95239;B3KNC0;Q2VIQ3;B4DYE2 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B ISO-MSMS -1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1117.4598 2 1117.45902 2232.90348 NaN NaN NaN -0.33034 -0.00036914 NaN NaN NaN NaN 110.18 1.2711 110.18 109.62 110.9 0 0 0 0 6.9068E-47 2 64646 125.46 113.77 5 273 944 130 145 435;436 435 1625 ALASNTSFFSGCSPIEEEAH 20 0 0 Phospho (STY) _ALASNTSFFSGCS(ph)PIEEEAH_ ALAS(0.003)NT(0.002)S(0.002)FFS(0.162)GCS(0.83)PIEEEAH ALAS(-24.62)NT(-25.27)S(-25.27)FFS(-7.09)GCS(7.09)PIEEEAH 0 0 1 0 Q59HG1;O95239;B3KNC0;Q2VIQ3;B4DYE2 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B ISO-MSMS -1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1117.962 2 1117.45902 2232.90348 NaN NaN NaN -0.71618 -0.0008003 NaN NaN NaN NaN 117.42 2.1571 117.42 116.9 119.05 0 0 0 0 4.6136E-09 3 76048 60.918 49.227 5 274 944 130 145 437;438;439 439 1625 ALDQSDNDMSAVYR 14 0 1 Oxidation (M),Phospho (STY) _ALDQS(ph)DNDM(ox)SAVYR_ ALDQSDNDM(1)SAVYR ALDQS(0.979)DNDMS(0.021)AVY(0.001)R ALDQSDNDM(40.24)SAVYR ALDQS(16.78)DNDMS(-16.78)AVY(-32.51)R 0 1 1 0 K7EMM8;D3DUE6;D3DUE7;Q49A26 K7EMM8 K7EMM8 GLYR1;N-PAC Putative oxidoreductase GLYR1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 845.8359 2 840.832192 1679.64983 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.316 1 54.316 53.816 54.816 -3.8147E-06 0 0 0 0.0094833 1 22971 40.237 25.265 3 275 767 131 146 440 440 207 1290 ALEAASLSQHPPSLCISDSEEEEEERK 27 1 1 2 Phospho (STY) _ALEAASLSQHPPSLCIS(ph)DS(ph)EEEEEERK_ ALEAAS(0.007)LS(0.023)QHPPS(0.325)LCIS(0.862)DS(0.783)EEEEEERK ALEAAS(-24.22)LS(-18.64)QHPPS(-5.28)LCIS(7.42)DS(5.28)EEEEEERK 0 0 2 1 E9PPY3;O43159 E9PPY3 E9PPY3 RRP8 Ribosomal RNA-processing protein 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1068.4526 3 1067.78254 3200.3258 58251.67 0.96577 0.0010312 -0.49508 -0.00052864 0.47069 0.0005026 1068.11625028538 1074.12398678781 101.53 0.99677 101.53 101.07 102.07 0 705 83 11 0 0 0 9.8279E-18 1 58248 67.947 67.947 10 0.83487 1.0047 0 181210000 92006000 89209000 276 815 132 147 441 441 1406;1407 ALEDLVDFK 9 1 0 Unmodified _ALEDLVDFK_ 0 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 529.2867 2 525.279315 1048.54408 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.33 1 113.33 112.83 113.83 0 0 0 0 0.011541 1 72936 52.482 16.602 1 277 994 133 148 442 442 ALEEGDGSVSGSSPR 15 0 1 Phospho (STY) _ALEEGDGSVSGSS(ph)PR_ ALEEGDGS(0.005)VS(0.062)GS(0.219)S(0.715)PR ALEEGDGS(-21.87)VS(-10.65)GS(-5.15)S(5.15)PR 0 0 1 0 B3KNP0;D3DQS4;Q8N3X1 B3KNP0 B3KNP0 FNBP4 Formin-binding protein 4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 764.8221 2 764.319774 1526.625 69982.98 1.1427 0.00087342 0.12862 9.8308E-05 1.2714 0.00097173 764.320246900118 769.324015378926 32.308 0.44667 32.308 32.087 32.534 0 146 36 6 0 0 0 0.0010551 1 17403 60.246 53.393 4 0.85742 0.68058 0 10981000 5938800 5042100 278 586 134 149 443 443 968 ALEESESSQLISPPLAQAIR 20 0 1 Phospho (STY) _ALEESESSQLIS(ph)PPLAQAIR_ ALEES(0.002)ES(0.007)S(0.007)QLIS(0.984)PPLAQAIR ALEES(-26.55)ES(-21.43)S(-21.43)QLIS(21.43)PPLAQAIR 0 0 1 0 P42166 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1115.056 2 1110.0514 2218.08824 62743.51 0.40883 0.00045382 0.10813 0.00012004 0.51697 0.00057386 1110.55312770085 1115.55687423618 120.43 0.46276 120.43 120.21 120.67 0 118 41 5 0 0 0 0.00011593 1 72536 43.208 35.664 4 1.032 1.1779 0 11405000 6410500 4994500 279 989 135 150 444 444 1751 ALEHLHSK 8 1 0 Unmodified _ALEHLHSK_ 0 0 0 0 D3DXI2;E9PRZ0;A0A024R8K3;B5BU16;A8K3Y2;C7DUW4;Q6FI23;Q6FHG1;Q53EZ9;P52564;P46734 D3DXI2 D3DXI2 hCG_28371;MAP2K3;MAP2K6 Dual specificity mitogen-activated protein kinase kinase 6;Dual specificity mitogen-activated protein kinase kinase 3 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 471.7659 2 467.758884 933.503215 NaN NaN NaN -0.062149 -2.9071E-05 NaN NaN NaN NaN 82.946 0.73791 82.946 82.437 83.175 0 0 0 0 4.9879E-11 1 44218 104.44 38.086 1 NaN NaN 0 33823000 0 33823000 280 154 136 151 445 445 ALEISPR 7 0 1 Phospho (STY) _ALEIS(ph)PR_ ALEIS(1)PR ALEIS(57.59)PR 0 0 1 0 Q8IY92 Q8IY92 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 438.2219 2 433.212593 864.410633 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.632 1 65.632 65.132 66.132 -7.6294E-06 0 0 0 0.022988 1 31670 57.59 11.164 1 281 1148 137 152 446 446 2200 ALEISPR 7 0 1 Phospho (STY) _ALEIS(ph)PR_ ALEIS(1)PR ALEIS(60.4)PR 0 0 1 0 Q8IY92 Q8IY92 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 438.2168 2 433.212593 864.410633 89832.85 0.33653 0.00014579 0.11769 5.0985E-05 0.45423 0.00019678 433.21198884532 438.216907068717 56.691 1.2803 56.691 55.951 57.231 0 294 107 5 0 0 0 0.029847 1 35039 60.398 11.974 1 2.6145 2.0814 0 11742000 3318300 8423400 282 1148 137 152 447 447 2200 ALEVEESNSEDEASFK 16 1 0 2 Phospho (STY) _ALEVEES(ph)NS(ph)EDEASFK_ ALEVEES(0.996)NS(0.991)EDEAS(0.013)FK ALEVEES(23.95)NS(20.59)EDEAS(-20.59)FK 0 0 2 0 Q03111 Q03111 Q03111 MLLT1 Protein ENL MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 976.8713 2 972.363391 1942.71223 63584.47 0.35925 0.00034932 0.1713 0.00016657 0.53055 0.00051589 972.363392464157 976.370905800643 84.171 0.81153 84.171 83.778 84.59 0 287 73 7 0 0 0 0.00045594 1 45190 43.604 43.604 3 0.41001 0.51877 0 31889000 22115000 9773400 283 1033 138 153 448 448 1877;1878 ALEVEESNSEDEASFK 16 1 0 2 Phospho (STY) _ALEVEES(ph)NS(ph)EDEASFK_ ALEVEES(0.988)NS(0.991)EDEAS(0.021)FK ALEVEES(19.26)NS(20.27)EDEAS(-19.26)FK 0 0 2 0 Q03111 Q03111 Q03111 MLLT1 Protein ENL MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 972.8665 2 972.363391 1942.71223 62859.29 0.58339 0.00056726 1.0619 0.0010326 1.6453 0.0015998 972.364430367739 976.371476769127 92.512 0.96932 92.512 92.061 93.03 0 526 95 7 0 0 0 0.00032354 1 59460 44.312 34.879 3 0.25338 0.16768 0 67796000 50887000 16909000 284 1033 138 153 449 449 1877;1878 ALEVEESNSEDEASFK 16 1 0 Phospho (STY) _ALEVEESNS(ph)EDEASFK_ ALEVEES(0.097)NS(0.901)EDEAS(0.002)FK ALEVEES(-9.69)NS(9.69)EDEAS(-25.79)FK 0 0 1 0 Q03111 Q03111 Q03111 MLLT1 Protein ENL MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 932.3928 2 932.380226 1862.7459 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.797 1 77.797 77.297 78.297 0 0 0 0 1.8363E-08 1 40637 112.34 90.465 3 285 1033 138 154 450 450 1877;1878 ALEVEESNSEDEASFK 16 1 0 Phospho (STY) _ALEVEESNS(ph)EDEASFK_ ALEVEES(0.153)NS(0.846)EDEASFK ALEVEES(-7.42)NS(7.42)EDEAS(-37.27)FK 0 0 1 0 Q03111 Q03111 Q03111 MLLT1 Protein ENL MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 932.3798 2 932.380226 1862.7459 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.872 1 77.872 77.372 78.372 0 0 0 0 1.0195E-05 1 40691 95.347 74.966 3 286 1033 138 154 451 451 1877;1878 ALHHGIDLEK 10 1 0 Unmodified _ALHHGIDLEK_ 0 0 0 0 H7BZ35;Q53T60;D3DP78;A0A140VJW5;P14868 H7BZ35 H7BZ35 DARS Aspartate--tRNA ligase, cytoplasmic MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 380.8793 3 378.208495 1131.60366 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.87 1 113.87 113.37 114.37 7.6294E-06 0 0 0 0.031471 1 67717 48.284 12.743 1 287 379 139 155 452 452 ALHHGIDLEK 10 1 0 Unmodified _ALHHGIDLEK_ 0 0 0 0 H7BZ35;Q53T60;D3DP78;A0A140VJW5;P14868 H7BZ35 H7BZ35 DARS Aspartate--tRNA ligase, cytoplasmic MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 380.8796 3 378.208495 1131.60366 NaN NaN NaN NaN NaN NaN NaN NaN NaN 114.63 1 114.63 114.13 115.13 7.6294E-06 0 0 0 0.0068042 1 68290 67.334 23.016 1 288 379 139 155 453 453 ALLETASPR 9 0 1 Phospho (STY) _ALLETAS(ph)PR_ ALLET(0.115)AS(0.885)PR ALLET(-8.88)AS(8.88)PR 0 0 1 0 B3KPB2;A8K662;Q96BT3;H3BMP6;H3BQS6;H3BN05;H3BTS2;H3BQJ0;I3L4F8;H3BUW2;H3BTR4 B3KPB2 B3KPB2 CENPT Centromere protein T MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 519.255 2 519.254989 1036.49543 85163.95 0.24345 0.00012641 0.15978 8.2968E-05 0.40323 0.00020938 519.254978697204 524.259077761113 67.074 0.69524 67.074 66.657 67.353 7.6294E-06 141 55 5 0 0 0 8.2233E-05 3 32789 108.7 34.232 2 0.61141 0.75168 0 28313000 17664000 10650000 289 479 140 156 454;455;456 456 831;2748 ALLETASPR 9 0 1 Phospho (STY) _ALLET(ph)ASPR_ ALLET(0.748)AS(0.252)PR ALLET(4.73)AS(-4.73)PR 0 0 1 0 B3KPB2;A8K662;Q96BT3;H3BMP6;H3BQS6;H3BN05;H3BTS2;H3BQJ0;I3L4F8;H3BUW2;H3BTR4 B3KPB2 B3KPB2 CENPT Centromere protein T MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 524.259 2 519.254989 1036.49543 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.219 1 59.219 58.719 59.719 0 0 0 0 0.0053623 1 36593 77.379 15.729 2 290 479 140 156 457 457 831;2748 ALLETASPRK 10 1 1 Phospho (STY) _ALLETAS(ph)PRK_ ALLET(0.043)AS(0.957)PRK ALLET(-13.48)AS(13.48)PRK 0 0 1 1 B3KPB2;A8K662;Q96BT3;H3BMP6;H3BQS6;H3BN05;H3BTS2;H3BQJ0;I3L4F8;H3BUW2;H3BTR4 B3KPB2 B3KPB2 CENPT Centromere protein T MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 583.3026 2 583.302471 1164.59039 79172.56 0.79686 0.00046481 -0.20614 -0.00012024 0.59072 0.00034457 583.302342988436 592.313505842412 35.312 0.78604 35.312 34.962 35.748 0 295 62 7 0 0 0 1.4903E-06 3 19614 105.03 83.66 2 0.72981 0.56249 0 39943000 21551000 18392000 291 479 141 157 458;459;460 458 831;2748 ALLSLRSPK 9 1 1 Phospho (STY) _ALLSLRS(ph)PK_ ALLS(0.037)LRS(0.963)PK ALLS(-14.19)LRS(14.19)PK 0 0 1 1 Q5H909;A0A024R9Y7;Q9UNF1 Q5H909 Q5H909 MAGED2 Melanoma-associated antigen D2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 541.8088 2 532.796824 1063.5791 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.695 1 88.695 88.195 89.195 7.6294E-06 0 0 0 0.00165 1 48455 74.53 33.752 2 292 176 142 158 461 461 276 ALLSLRSPK 9 1 1 Phospho (STY) _ALLSLRS(ph)PK_ ALLS(0.235)LRS(0.765)PK ALLS(-5.13)LRS(5.13)PK 0 0 1 1 Q5H909;A0A024R9Y7;Q9UNF1 Q5H909 Q5H909 MAGED2 Melanoma-associated antigen D2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 532.7968 2 532.796824 1063.5791 81956.1 0.86452 0.00046062 -0.35335 -0.00018827 0.51117 0.00027235 532.796547536542 541.807829586303 73.475 1.1859 73.475 72.75 73.936 0 438 103 7 0 0 0 0.0093226 1 46718 53.567 16.883 2 0.64084 0.4897 0 22210000 13002000 9207700 293 176 142 158 462 462 276 ALNHEIEELEK 11 1 0 Unmodified _ALNHEIEELEK_ 0 0 0 0 B7ZLZ7;A0A024R158;O95347;Q05BV1;A8K984;Q2KQ72;B3KMB1;Q7Z2X1;Q6IPS5;Q5T821;A0JLM9 B7ZLZ7 B7ZLZ7 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 662.8409 2 662.840799 1323.66705 75666.46 0.92037 0.00061006 -0.38246 -0.00025351 0.53791 0.00035655 662.840553487204 666.847673058133 106.61 0.72815 106.61 106.15 106.88 0 183 52 4 0 0 0 2.0417E-05 1 61786 98.156 60.46 1 0.84414 1.0615 0 52958000 26705000 26253000 294 39 143 159 463 463 ALNHEIEELEK 11 1 0 Unmodified _ALNHEIEELEK_ 0 0 0 0 B7ZLZ7;A0A024R158;O95347;Q05BV1;A8K984;Q2KQ72;B3KMB1;Q7Z2X1;Q6IPS5;Q5T821;A0JLM9 B7ZLZ7 B7ZLZ7 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 442.5638 3 442.229625 1323.66705 90909.61 0.12997 5.7478E-05 -0.18569 -8.2116E-05 -0.055712 -2.4638E-05 442.2294671628 444.900915646402 106.61 0.84822 106.61 106.06 106.91 -7.6294E-06 324 61 8 0 0 0 0.011853 1 61828 27.431 16.972 1 0.83915 1.0416 0 106500000 57179000 49317000 295 39 143 159 464 464 ALNTLSSPGQSSFSHGTR 18 0 1 2 Phospho (STY) _ALNTLSS(ph)PGQS(ph)SFSHGTR_ ALNT(0.001)LS(0.204)S(0.794)PGQS(0.53)S(0.426)FS(0.034)HGT(0.011)R ALNT(-31.91)LS(-6.19)S(6.19)PGQS(0.96)S(-0.96)FS(-13.08)HGT(-18.88)R 0 0 2 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1003.9243 2 1003.92208 2005.8296 60155.97 0.28998 0.00029111 0.63147 0.00063394 0.92144 0.00092506 1003.92266890216 1008.92679033941 72.108 1.191 72.108 71.619 72.81 0 491 98 7 0 0 0 1.1047E-07 3 36096 73.168 62.222 21 0.57363 0.72413 0 88664000 49330000 39333000 296 1167 144 160 465;466;467 467 2259;2260 ALNTLSSPGQSSFSHGTR 18 0 1 2 Phospho (STY) _ALNTLSS(ph)PGQS(ph)SFSHGTR_ ALNT(0.022)LS(0.461)S(0.513)PGQS(0.477)S(0.428)FS(0.091)HGT(0.006)R ALNT(-13.88)LS(-0.48)S(0.48)PGQS(0.48)S(-0.48)FS(-7.33)HGT(-19.43)R 0 0 2 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 669.617 3 669.617143 2005.8296 73897.84 0.68499 0.00045868 0.62538 0.00041877 1.3104 0.00087745 669.617109005292 672.953473049172 72.155 1.0572 72.155 71.6 72.657 -7.6294E-06 457 88 7 0 0 0 8.9741E-05 1 36318 46.833 37.669 21 0.5962 0.75239 0 75365000 43373000 31991000 297 1167 144 160 468 468 2259;2260 ALNTLSSPGQSSFSHGTR 18 0 1 Phospho (STY) _ALNTLSS(ph)PGQSSFSHGTR_ ALNTLS(0.171)S(0.829)PGQSSFSHGTR ALNT(-48.73)LS(-6.86)S(6.86)PGQS(-45.1)S(-51.34)FS(-63.51)HGT(-75.22)R 0 0 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 642.9622 3 642.961699 1925.86327 74711.32 0.84001 0.00054009 0.0026828 1.725E-06 0.84269 0.00054182 643.296088758097 646.297789209727 74.252 1.5806 74.252 73.675 75.255 -7.6294E-06 984 139 10 0 0 0 3.8072E-38 3 38268 130.05 115.54 7 0.68527 0.8679 0 566390000 327080000 239310000 298 1167 144 161 469;470;471 471 2259;2260 ALNTLSSPGQSSFSHGTR 18 0 1 Phospho (STY) _ALNTLSS(ph)PGQSSFSHGTR_ ALNTLS(0.013)S(0.971)PGQS(0.012)S(0.003)FSHGTR ALNT(-61.28)LS(-18.61)S(18.61)PGQS(-19.05)S(-25.3)FS(-37.65)HGT(-47.75)R 0 0 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 963.9403 2 963.938911 1925.86327 62024.82 0.42651 0.00041113 0.56815 0.00054766 0.99466 0.00095879 964.440748807835 968.943821935169 74.315 1.286 74.315 73.774 75.06 0 730 111 9 0 0 0 1.6291E-31 3 38269 126.07 108.67 7 0.68493 0.8655 0 157220000 95064000 62153000 299 1167 144 161 472;473;474 474 2259;2260 ALNTLSSPGQSSFSHGTR 18 0 1 Phospho (STY) _ALNTLSS(ph)PGQSSFSHGTR_ ALNTLS(0.247)S(0.752)PGQS(0.001)SFSHGTR ALNT(-40.78)LS(-4.83)S(4.83)PGQS(-28.77)S(-35.25)FS(-47.92)HGT(-44.79)R 0 0 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 969.4442 2 963.938911 1925.86327 61037.83 0.73091 0.00070455 0.6041 0.00058231 1.335 0.0012869 963.939637224636 968.943524902185 64.694 1.6667 64.694 63.73 65.397 0 1048 148 10 0 0 0 1.4233E-23 4 39844 115.57 101.78 7 1.2349 0.81652 0 226250000 98302000 127940000 300 1167 144 161 475;476;477;478 475 2259;2260 ALNTLSSPGQSSFSHGTR 18 0 1 Phospho (STY) _ALNTLSS(ph)PGQSSFSHGTR_ ALNT(0.001)LS(0.205)S(0.792)PGQS(0.001)SFSHGT(0.001)R ALNT(-29.03)LS(-5.88)S(5.88)PGQS(-27.98)S(-34.27)FS(-33.48)HGT(-31.73)R 0 0 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 642.9627 3 642.961699 1925.86327 75213.54 1.1053 0.00071066 0.7094 0.00045612 1.8147 0.0011668 642.962275497453 646.298343788014 64.66 2.1944 64.66 63.525 65.72 0 1554 196 12 0 0 0 6.6909E-08 3 40389 72.99 63.428 7 1.2673 0.82538 0 480060000 209350000 270720000 301 1167 144 161 479;480;481 480 2259;2260 ALNVTVDVQSPACTSYQMTPQGHR 24 0 1 Oxidation (M),Phospho (STY) _ALNVTVDVQS(ph)PACTSYQM(ox)TPQGHR_ ALNVTVDVQSPACTSYQM(1)TPQGHR ALNVT(0.291)VDVQS(0.513)PACT(0.08)S(0.08)Y(0.035)QMT(0.002)PQGHR ALNVTVDVQSPACTSYQM(45.13)TPQGHR ALNVT(-2.47)VDVQS(2.47)PACT(-8.07)S(-8.07)Y(-11.7)QMT(-24.62)PQGHR 0 1 1 0 Q9NQS7 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 920.0792 3 919.410448 2755.20951 64731.73 -0.10395 -9.557E-05 -0.10131 -9.3147E-05 -0.20526 -0.00018872 919.410110804647 922.74705951214 91.981 0.29205 91.981 91.828 92.12 0 90 25 7 0 0 0 1.2102E-06 1 50964 45.125 45.125 6 1.0879 1.3374 0 28478000 12772000 15705000 302 1212 145 162 482 482 341 2419 ALPSLNTGSSSPR 13 0 1 Phospho (STY) _ALPSLNTGSSS(ph)PR_ ALPSLNT(0.015)GS(0.219)S(0.219)S(0.546)PR ALPS(-41.47)LNT(-15.64)GS(-3.96)S(-3.96)S(3.96)PR 0 0 1 0 A0A024RBK4;O14545 A0A024RBK4 A0A024RBK4 TRAFD1 TRAF-type zinc finger domain-containing protein 1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 689.3276 2 683.821756 1365.62896 NaN NaN NaN -0.1349 -9.225E-05 NaN NaN NaN NaN 75.289 0.53684 75.289 74.909 75.446 0 0 0 0 0.00073361 1 38686 75.316 34.589 5 NaN NaN 0 14233000 0 14233000 303 200 146 163 483 483 312;313;314;2659 ALPSLNTGSSSPR 13 0 1 Phospho (STY) _ALPSLNTGSSS(ph)PR_ ALPSLNT(0.017)GS(0.285)S(0.285)S(0.412)PR ALPS(-36.28)LNT(-13.96)GS(-1.6)S(-1.6)S(1.6)PR 0 0 1 0 A0A024RBK4;O14545 A0A024RBK4 A0A024RBK4 TRAFD1 TRAF-type zinc finger domain-containing protein 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 688.8254 2 683.821756 1365.62896 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.996 1 74.996 74.496 75.496 0 0 0 0 0.00028567 1 38507 58.885 19.26 5 304 200 146 163 484 484 312;313;314;2659 ALPSLNTGSSSPR 13 0 1 Phospho (STY) _ALPSLNTGS(ph)SSPR_ ALPSLNT(0.03)GS(0.323)S(0.323)S(0.323)PR ALPS(-35.16)LNT(-10.32)GS(0)S(0)S(0)PR 0 0 1 0 A0A024RBK4;O14545 A0A024RBK4 A0A024RBK4 TRAFD1 TRAF-type zinc finger domain-containing protein 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 683.8215 2 683.821756 1365.62896 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.327 1 75.327 74.827 75.827 -7.6294E-06 0 0 0 2.4721E-05 1 38740 70.68 40.474 5 305 200 146 163 485 485 312;313;314;2659 ALPSLNTGSSSPR 13 0 1 Phospho (STY) _ALPSLNT(ph)GSSSPR_ ALPS(0.002)LNT(0.297)GS(0.234)S(0.234)S(0.234)PR ALPS(-21.11)LNT(1.04)GS(-1.04)S(-1.04)S(-1.04)PR 0 0 1 0 A0A024RBK4;O14545 A0A024RBK4 A0A024RBK4 TRAFD1 TRAF-type zinc finger domain-containing protein 1 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 683.8223 2 683.821756 1365.62896 NaN NaN NaN -0.71536 -0.00048918 NaN NaN NaN NaN 74.353 0.76669 74.353 74.05 74.817 0 0 0 0 0.023368 1 47246 41.54 26.338 5 NaN NaN 0 2937200 2937200 0 306 200 146 163 486 486 312;313;314;2659 ALPSLNTGSSSPR 13 0 1 Phospho (STY) _ALPSLNTGSSS(ph)PR_ ALPS(0.001)LNT(0.075)GS(0.204)S(0.204)S(0.515)PR ALPS(-27.14)LNT(-8.36)GS(-4.02)S(-4.02)S(4.02)PR 0 0 1 0 A0A024RBK4;O14545 A0A024RBK4 A0A024RBK4 TRAFD1 TRAF-type zinc finger domain-containing protein 1 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 688.8268 2 683.821756 1365.62896 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.335 1 74.335 73.835 74.835 0 0 0 0 6.9631E-05 1 47231 65.511 7.9795 5 307 200 146 163 487 487 312;313;314;2659 ALQALQNEPIPERSPQNGESGK 22 1 1 Phospho (STY) _ALQALQNEPIPERS(ph)PQNGESGK_ ALQALQNEPIPERS(0.774)PQNGES(0.226)GK ALQALQNEPIPERS(5.34)PQNGES(-5.34)GK 0 0 1 1 E5RJN7;A0A0A0MTC4;A0A0A0MTD1;Q2TBD5;F8VPI7;Q4LE57;E7EPX0;A0A0A0MTC6;E7EVJ4;E9PH62;A0A0A0MTC5;A0A024R7X7;Q9NUL3;E5RFK1;E7EVI1;B7Z1P6;A8K276 E5RJN7 E5RJN7 STAU2;STAU2 variant protein Double-stranded RNA-binding protein Staufen homolog 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 821.0659 3 815.05862 2442.15403 67609.62 0.91648 0.00074699 -0.88176 -0.00071869 0.034723 2.8301E-05 815.058600586432 821.398188160429 80.19 0.492 80.19 79.837 80.329 0 122 44 5 0 0 0 9.7799E-08 1 42299 53.089 40.241 2 1.0239 1.2113 0 49118000 27896000 21222000 308 143 147 164 488 488 215 ALQALQNEPIPERSPQNGESGK 22 1 1 Phospho (STY) _ALQALQNEPIPERS(ph)PQNGESGK_ ALQALQNEPIPERS(0.979)PQNGES(0.021)GK ALQALQNEPIPERS(16.78)PQNGES(-16.78)GK 0 0 1 1 E5RJN7;A0A0A0MTC4;A0A0A0MTD1;Q2TBD5;F8VPI7;Q4LE57;E7EPX0;A0A0A0MTC6;E7EVJ4;E9PH62;A0A0A0MTC5;A0A024R7X7;Q9NUL3;E5RFK1;E7EVI1;B7Z1P6;A8K276 E5RJN7 E5RJN7 STAU2;STAU2 variant protein Double-stranded RNA-binding protein Staufen homolog 2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 815.6747 3 815.05862 2442.15403 NaN NaN NaN -3.3665 -0.0027439 NaN NaN NaN NaN 80.791 0.08905 80.791 80.725 80.814 0 0 0 0 5.4034E-07 1 42831 53.705 41.852 2 NaN NaN 0 10643000 10643000 0 309 143 147 164 489 489 215 ALSNILPK 8 1 0 Phospho (STY) _ALS(ph)NILPK_ ALS(1)NILPK ALS(69.81)NILPK 0 0 1 0 A0A0D9SGD9;Q6IEE8 A0A0D9SGD9 A0A0D9SGD9 SLFN12L Schlafen family member 12-like MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 468.2514 2 468.251718 934.488884 91112.25 0.47174 0.00022089 -0.21576 -0.00010103 0.25598 0.00011986 468.251499524628 472.258676402935 83.285 0.53223 83.285 82.988 83.521 0 146 50 4 0 0 0 0.0071716 2 53438 69.812 11.378 1 1.1616 0.87806 0 10597000 4511700 6085500 310 334 148 165 490;491 491 526 ALSPGLEESGLGLLAR 16 0 1 Phospho (STY) _ALS(ph)PGLEESGLGLLAR_ ALS(1)PGLEESGLGLLAR ALS(64.41)PGLEES(-64.41)GLGLLAR 0 0 1 0 A0A024R856;H9KVB4;O15417 A0A024R856 A0A024R856 hCG_96198;TNRC18 Trinucleotide repeat-containing gene 18 protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 831.9282 2 831.926752 1661.83895 68852.19 1.017 0.00084607 0.28184 0.00023447 1.2989 0.0010805 831.926875553544 836.931076149765 128.54 0.42287 128.54 128.39 128.81 0 166 33 7 0 0 0 1.3763E-11 2 78014 92.063 72.669 2 0.51223 0.57566 0 10360000 6523800 3836400 311 147 149 166 492;493 492 221 ALSPSDSLEIFTK 13 1 0 Phospho (STY) _ALS(ph)PSDSLEIFTK_ ALS(0.999)PS(0.001)DS(0.001)LEIFTK ALS(31.53)PS(-31.53)DS(-31.61)LEIFT(-42.16)K 0 0 1 0 G3V5X4;A0A0A0MRE3;D4YW74;Q8WXH0 G3V5X4 G3V5X4 SYNE2;TROPH Nesprin-2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 748.3623 2 744.355097 1486.69564 NaN NaN NaN NaN NaN NaN NaN NaN NaN 123.47 1 123.47 122.97 123.97 0 0 0 0 0.0013922 1 74750 51.211 23.802 4 312 285 150 167 494 494 445 ALSSDSILSPAPDAR 15 0 1 2 Phospho (STY) _ALS(ph)SDSILS(ph)PAPDAR_ ALS(0.487)S(0.487)DS(0.029)ILS(0.996)PAPDAR ALS(0)S(0)DS(-12.5)ILS(23.86)PAPDAR 0 0 2 0 Q8IVT2 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 835.3611 2 830.354975 1658.6954 67570.65 1.4666 0.0012178 -0.25505 -0.00021178 1.2115 0.001006 830.354705932141 835.358681389085 101.13 0.67384 101.13 100.79 101.46 0 207 53 5 0 0 0 5.3089E-05 1 57965 74.141 56.739 6 0.61527 0.74609 0 19976000 10785000 9191600 313 1144 151 168 495 495 2190;2191;2192 ALSSDSILSPAPDAR 15 0 1 2 Phospho (STY) _ALS(ph)S(ph)DSILSPAPDAR_ ALS(0.92)S(0.936)DS(0.143)ILS(0.001)PAPDAR ALS(10.33)S(11.32)DS(-10.33)ILS(-34.12)PAPDAR 0 0 2 0 Q8IVT2 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 830.355 2 830.354975 1658.6954 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.99 1 111.99 111.49 112.49 7.6294E-06 0 0 0 0.00017282 1 66382 56.65 31.433 6 314 1144 151 168 496 496 2190;2191;2192 ALSSDSILSPAPDAR 15 0 1 Phospho (STY) _ALSSDSILS(ph)PAPDAR_ ALSSDSILS(1)PAPDAR ALS(-57.64)S(-59.21)DS(-44.67)ILS(44.67)PAPDAR 0 0 1 0 Q8IVT2 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 795.3781 2 790.37181 1578.72907 NaN NaN NaN 0.18635 0.00014729 NaN NaN NaN NaN 98.033 1.1834 98.033 97.307 98.49 0 0 0 0 1.299E-12 1 62970 103.5 61.857 4 NaN NaN 0 20578000 0 20578000 315 1144 151 169 497 497 2190;2191;2192 ALTHIDHSLSR 11 0 1 Unmodified _ALTHIDHSLSR_ 0 0 0 0 A8K492;P56192;F5H2V6;A0A024RBA2 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 420.5628 3 417.226438 1248.65748 NaN NaN NaN 0.0090037 3.7566E-06 NaN NaN NaN NaN 105.12 0.80744 105.12 104.68 105.49 0 0 0 0 0.0059464 1 61166 71.555 56.876 1 NaN NaN 0 7743100 0 7743100 316 457 152 170 498 498 ALTHIDHSLSR 11 0 1 Unmodified _ALTHIDHSLSR_ 0 0 0 0 A8K492;P56192;F5H2V6;A0A024RBA2 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 420.5624 3 417.226438 1248.65748 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.61 1 104.61 104.11 105.11 0 0 0 0 0.0051943 1 60583 89.403 60.063 1 317 457 152 170 499 499 ALVEFESNPEETR 13 0 1 Unmodified _ALVEFESNPEETR_ 0 0 0 0 Q6ZW18;Q9H6F5;H0YG79 Q6ZW18;Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 766.3714 2 760.865002 1519.71545 74541.24 1.0363 0.00078847 1.2631 0.00096102 2.2993 0.0017495 760.866827335023 766.370775980019 81.692 0.50703 81.692 81.428 81.935 0 128 49 4 0 0 0 0.015979 2 52433 57.836 29.668 1 0.74442 0.59307 0 9195700 4550700 4645000 318 1207;1129 153 171 500;501 501 ALVEFESNPEETREPGPPPSVQR 23 0 2 Phospho (STY) _ALVEFESNPEET(ph)REPGPPPSVQR_ ALVEFESNPEET(0.5)REPGPPPS(0.5)VQR ALVEFES(-36.13)NPEET(0)REPGPPPS(0)VQR 0 0 1 1 Q6ZW18 Q6ZW18 Q6ZW18 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 882.744 3 882.412952 2644.21703 NaN NaN NaN -4.2575 -0.0037568 NaN NaN NaN NaN 94.227 1.7337 94.227 93.421 95.155 0 0 0 0 7.5628E-29 2 52984 105.03 49.292 3 NaN NaN 0 132020000 132020000 0 319 1129 154 172 502;503 503 2155;2960 ALVEFESNPEETREPGSPPSVQR 23 0 2 Phospho (STY) _ALVEFESNPEETREPGS(ph)PPSVQR_ ALVEFESNPEET(0.001)REPGS(0.996)PPS(0.003)VQR ALVEFES(-75.49)NPEET(-30.56)REPGS(25.74)PPS(-25.74)VQR 0 0 1 1 Q9H6F5;H0YG79 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 879.4083 3 879.072706 2634.19629 63750.97 0.88719 0.0007799 0.14474 0.00012723 1.0319 0.00090714 879.407419907369 886.078919529069 94.248 2.4374 94.248 93.328 95.766 0 1870 204 15 0 0 0 1.9275E-88 5 52717 165.47 165.47 4 0.74049 0.93592 0 3904200000 2253700000 1650400000 320 1207 155 173 504;505;506;507;508 506 2408;2409;2986 ALVEFESNPEETREPGSPPSVQR 23 0 2 Phospho (STY) _ALVEFESNPEET(ph)REPGSPPSVQR_ ALVEFES(0.015)NPEET(0.346)REPGS(0.293)PPS(0.346)VQR ALVEFES(-13.62)NPEET(0)REPGS(-0.73)PPS(0)VQR 0 0 1 1 Q9H6F5;H0YG79 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 886.0799 3 879.072706 2634.19629 65896.52 1.2472 0.0010963 -0.50433 -0.00044334 0.74283 0.00065301 879.406658120564 886.078590110376 99.671 0.29415 99.671 99.451 99.745 0 65 23 5 0 0 0 4.5092E-07 2 56883 47.745 29.221 4 0.87947 1.0866 0 31369000 14809000 16559000 321 1207 155 173 509;510 510 2408;2409;2986 ALVEFESNPEETREPGSPPSVQR 23 0 2 Phospho (STY) _ALVEFESNPEET(ph)REPGSPPSVQR_ ALVEFES(0.022)NPEET(0.478)REPGS(0.401)PPS(0.1)VQR ALVEFES(-13.37)NPEET(0.77)REPGS(-0.77)PPS(-6.81)VQR 0 0 1 1 Q9H6F5;H0YG79 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 886.0797 3 879.072706 2634.19629 63311.76 1.6018 0.0014081 0.62941 0.00055329 2.2312 0.0019614 879.408851498247 886.079121958473 99.973 0.3894 99.973 99.732 100.12 -7.6294E-06 88 31 4 0 0 0 3.1021E-08 2 57186 53.475 36.117 4 0.90069 1.1055 0 25471000 14226000 11245000 322 1207 155 173 511;512 512 2408;2409;2986 ALVEFESNPEETREPGSPPSVQR 23 0 2 Phospho (STY) _ALVEFESNPEET(ph)REPGSPPSVQR_ ALVEFES(0.001)NPEET(0.475)REPGS(0.475)PPS(0.049)VQR ALVEFES(-25.13)NPEET(0)REPGS(0)PPS(-9.86)VQR 0 0 1 1 Q9H6F5;H0YG79 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 659.8083 4 659.556349 2634.19629 73543.66 1.077 0.00071034 -0.38561 -0.00025433 0.69139 0.00045601 659.806927808824 664.811152470109 85.82 1.3071 85.82 84.976 86.283 0 632 122 10 0 0 0 5.0115E-06 1 54967 41.939 34.042 4 0.53915 0.46799 0 61185000 38577000 22608000 323 1207 155 173 513 513 2408;2409;2986 ALVEFESNPEETREPGSPPSVQR 23 0 2 Phospho (STY) _ALVEFESNPEET(ph)REPGSPPSVQR_ ALVEFES(0.003)NPEET(0.507)REPGS(0.412)PPS(0.078)VQR ALVEFES(-22.81)NPEET(0.9)REPGS(-0.9)PPS(-8.12)VQR 0 0 1 1 Q9H6F5;H0YG79 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 886.0786 3 879.072706 2634.19629 63327.95 0.74482 0.00065475 -0.034777 -3.0572E-05 0.71004 0.00062418 879.407644606843 886.078564274312 94.227 2.97 94.227 93.412 96.382 0 2613 284 15 0 0 0 2.5457E-07 4 60777 50.425 49.186 4 0.54125 0.47912 0 3254500000 2112900000 1141600000 324 1207 155 173 514;515;516;517 516 2408;2409;2986 ALVEFESNPEETREPGSPPSVQR 23 0 2 2 Phospho (STY) _ALVEFESNPEETREPGS(ph)PPS(ph)VQR_ ALVEFES(0.008)NPEET(0.238)REPGS(0.933)PPS(0.822)VQR ALVEFES(-22.82)NPEET(-6.42)REPGS(10.95)PPS(6.42)VQR 0 0 2 1 Q9H6F5;H0YG79 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 906.397 3 905.72815 2714.16262 63060.34 1.2803 0.0011596 -0.084893 -7.689E-05 1.1955 0.0010828 906.062300426837 912.400572409319 96.502 1.4261 96.502 95.766 97.192 7.6294E-06 1009 118 11 0 0 0 4.872E-16 3 54036 80.722 70.484 6 0.49284 0.61729 0 440620000 290240000 150390000 325 1207 155 174 518;519;520 518 2408;2409;2986 ALVHQLSNESR 11 0 1 Phospho (STY) _ALVHQLS(ph)NESR_ ALVHQLS(0.999)NES(0.001)R ALVHQLS(29.05)NES(-29.05)R 0 0 1 0 Q9H4L5 Q9H4L5 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 667.3166 2 667.316641 1332.61873 74991.69 0.75604 0.00050452 0.59759 0.00039878 1.3536 0.00090329 667.316441904793 672.320988282158 64.811 0.41673 64.811 64.635 65.052 -7.6294E-06 107 30 6 0 0 0 0.00018949 2 30980 89.301 70.169 2 0.52976 0.66652 0 46805000 31664000 15141000 326 1205 156 175 521;522 522 2398 ALVHQLSNESR 11 0 1 Phospho (STY) _ALVHQLS(ph)NESR_ ALVHQLS(0.97)NES(0.03)R ALVHQLS(15.12)NES(-15.12)R 0 0 1 0 Q9H4L5 Q9H4L5 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 667.3174 2 667.316641 1332.61873 NaN NaN NaN 0.65806 0.00043913 NaN NaN NaN NaN 36.629 0.71003 36.629 36.278 36.988 0 0 0 0 4.0767E-06 1 20631 90.861 71.729 2 NaN NaN 0 10947000 10947000 0 327 1205 156 175 523 523 2398 ALYDYAGQEADELSFR 16 0 1 Phospho (STY) _ALYDYAGQEADELS(ph)FR_ ALYDYAGQEADELS(1)FR ALY(-112.22)DY(-107.23)AGQEADELS(107.23)FR 0 0 1 0 A0A0C4DGG1;B4DUI2;D3DQR0;Q9UKS6 A0A0C4DGG1 A0A0C4DGG1 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 964.4097 2 964.409121 1926.80369 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.05 1 112.05 111.55 112.55 0 0 0 0 1.0257E-12 1 66426 120.63 103.74 3 328 322 157 176 524 524 504 AMAATLGAGTPPRPQAR 17 0 2 Oxidation (M),Phospho (STY) _AM(ox)AATLGAGT(ph)PPRPQAR_ AM(1)AATLGAGTPPRPQAR AMAAT(0.081)LGAGT(0.919)PPRPQAR AM(75.36)AATLGAGTPPRPQAR AMAAT(-10.53)LGAGT(10.53)PPRPQAR 0 1 1 1 A0A087X1U6;P58107 A0A087X1U6 A0A087X1U6 EPPK1 Epiplakin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 594.6262 3 587.953711 1760.8393 78293.17 0.5712 0.00033584 0.17026 0.0001001 0.74146 0.00043594 587.953638797673 594.62577876091 62.62 0.79951 62.62 62.24 63.039 0 221 65 6 0 0 0 1.0306E-06 1 29258 75.358 65.162 2 2.4764 3.0513 0 28774000 6473200 22301000 329 273 158 177 525 525 67 2672 AMGIMNSFVNDIFER 15 0 1 Oxidation (M) _AM(ox)GIMNSFVNDIFER_ AM(1)GIMNSFVNDIFER AM(50.14)GIM(-50.14)NSFVNDIFER 0 1 0 0 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;P57053;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257 B2R4S9;A0A024RCJ2 B2R4S9 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 880.9122 2 880.41074 1758.80693 64252.42 0.98848 0.00087027 -0.079954 -7.0392E-05 0.90853 0.00079988 880.411175396788 885.414761609271 134.62 0.16936 134.62 134.54 134.71 0 46 7 9 0 0 0 8.0445E-07 2 86898 90.614 75.738 2 0.75986 0.58039 0 18144000 10001000 8142700 330 21;211 159 178 526;527 526 1;2 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(72.09)GIM(72.09)NSFVNDIFER 0 2 0 0 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;P57053;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257 B2R4S9;A0A024RCJ2 B2R4S9 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 888.4095 2 888.408197 1774.80184 NaN NaN NaN -0.68604 -0.00060948 NaN NaN NaN NaN 124.31 0.85137 124.31 123.82 124.67 0 0 0 0 6.0649E-05 2 80206 72.089 56.2 1 NaN NaN 0 35878000 35878000 0 331 21;211 159 179 528;529 528 1;2 AMGIMNSFVNDIFER 15 0 1 2 Oxidation (M) _AM(ox)GIM(ox)NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(62.92)GIM(62.92)NSFVNDIFER 0 2 0 0 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;P57053;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257 B2R4S9;A0A024RCJ2 B2R4S9 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 893.9122 2 888.408197 1774.80184 NaN NaN NaN -2.1138 -0.0018779 NaN NaN NaN NaN 124.29 0.7179 124.29 123.83 124.55 0 0 0 0 5.8014E-05 1 80288 62.924 49.018 1 NaN NaN 0 7922500 0 7922500 332 21;211 159 179 530 530 1;2 AMHTPKPSVGEEK 13 2 0 Oxidation (M) _AM(ox)HTPKPSVGEEK_ AM(1)HTPKPSVGEEK AM(45.12)HTPKPSVGEEK 0 1 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 481.5803 3 476.238014 1425.69221 90302.66 0.17073 8.1308E-05 -0.10085 -4.8028E-05 0.069881 3.328E-05 476.237915460437 481.580674161393 73.784 0.58231 73.784 73.453 74.035 0 99 50 4 0 0 0 0.012146 1 37643 45.115 35.064 1 2.4948 2.7131 0 12740000 3104800 9634800 333 994 160 180 531 531 278 AMPEEEPVRGPAK 13 1 1 Oxidation (M) _AM(ox)PEEEPVRGPAK_ AM(1)PEEEPVRGPAK AM(53.03)PEEEPVRGPAK 0 1 0 1 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 476.2382 3 476.238014 1425.69221 87392.55 0.48745 0.00023214 -0.31698 -0.00015096 0.17047 8.1184E-05 476.237908551135 482.245347156422 60.469 0.3975 60.469 60.277 60.674 0 118 26 6 0 0 0 0.010256 1 27500 53.034 42.109 1 0.83754 0.96079 0 24612000 12016000 12596000 334 566 161 181 532 532 145 AMSSGGSGGGVPEQEDSVLFR 21 0 1 Acetyl (Protein N-term),Oxidation (M),Phospho (STY) _(ac)AM(ox)SS(ph)GGSGGGVPEQEDSVLFR_ AM(1)SSGGSGGGVPEQEDSVLFR AMS(0.103)S(0.794)GGS(0.103)GGGVPEQEDSVLFR AM(84.83)SSGGSGGGVPEQEDSVLFR AMS(-8.86)S(8.86)GGS(-8.86)GGGVPEQEDS(-64.72)VLFR 1 1 1 0 B4DP61;E7EQZ4;Q16637;Q9UNT8 B4DP61 B4DP61 SMN2;SMN1;SMN Survival motor neuron protein ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1107.9656 2 1102.96192 2203.90929 NaN NaN NaN 0.47911 0.00052844 NaN NaN NaN NaN 114.78 0.82032 114.78 114.28 115.1 -7.6294E-06 0 0 0 1.3331E-13 2 68363 84.829 74.548 4 NaN NaN 0 22788000 0 22788000 335 649 162 182 533;534 534 164 1079 ANCIDSTASAEAVFASEVK 19 1 0 Unmodified _ANCIDSTASAEAVFASEVK_ 0 0 0 0 Q96BS4;P22087;M0R299;M0QXL5;M0R2Q4;B4DLD4 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 989.4711 2 985.462212 1968.90987 61878.27 0.69045 0.00068041 2.0465 0.0020168 2.737 0.0026972 985.96688664422 989.470018235538 112.57 0.94273 112.57 112.2 113.14 0 301 90 5 0 0 0 0.022518 1 72404 28.812 23.533 1 0.66351 0.51813 0 13708000 8104100 5604100 336 974 163 183 535 535 ANGTTVHVGIHPSK 14 1 0 Unmodified _ANGTTVHVGIHPSK_ 0 0 0 0 E5RIT6;Q9UNX3;J3KS10;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;Q6IBH6;P61254 E5RIT6;J3QRI7 J3QRI7 RPL26L1;RPL26 60S ribosomal protein L26-like 1;60S ribosomal protein L26 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 475.9283 3 473.256397 1416.74736 87723.09 0.75682 0.00035817 0.34848 0.00016492 1.1053 0.00052309 473.256435186156 475.928033243188 93.102 1.144 93.102 92.728 93.872 7.6294E-06 430 94 8 0 0 0 0.010041 2 51767 30.543 30.543 1 0.78583 0.97279 0 202390000 117960000 84427000 337 786;896 164 184 536;537 537 ANGTTVHVGIHPSK 14 1 0 Unmodified _ANGTTVHVGIHPSK_ 0 0 0 0 E5RIT6;Q9UNX3;J3KS10;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;Q6IBH6;P61254 E5RIT6;J3QRI7 J3QRI7 RPL26L1;RPL26 60S ribosomal protein L26-like 1;60S ribosomal protein L26 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 357.198 4 355.194117 1416.74736 99594.69 0.31274 0.00011108 0.49239 0.00017489 0.80513 0.00028598 355.194170469515 357.197726626805 93.247 1.0028 93.247 92.679 93.681 0 223 82 6 0 0 0 0.020676 1 51824 22.803 17.26 1 0.84596 1.0564 0 67643000 33426000 34217000 338 786;896 164 184 538 538 ANLLDSMFGSPGGLR 15 0 1 Oxidation (M),Phospho (STY) _ANLLDSM(ox)FGS(ph)PGGLR_ ANLLDSM(1)FGSPGGLR ANLLDSMFGS(1)PGGLR ANLLDSM(64.67)FGSPGGLR ANLLDS(-33.49)MFGS(33.49)PGGLR 0 1 1 0 Q9HD72;A8K6Y8;A0A024R1H7;A0A024R1F8;Q59HH1;A0A024R1M5;Q9HBE1 Q9HD72 Q9HD72 ZNF278;PATZ1 POZ-, AT hook-, and zinc finger-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 816.3708 2 815.86838 1629.72221 68363.76 0.94634 0.00077209 0.0244 1.9907E-05 0.97074 0.000792 816.369676351507 820.87250684031 113.37 0.47668 113.38 113.08 113.56 7.6294E-06 113 43 5 0 0 0 0.00076474 2 67255 64.675 64.675 2 1.0342 1.2002 0 12652000 5330500 7321900 339 44 165 185 539;540 540 3 53 ANLLDSMFGSPGGLR 15 0 1 Oxidation (M),Phospho (STY) _ANLLDSM(ox)FGS(ph)PGGLR_ ANLLDSM(1)FGSPGGLR ANLLDS(0.021)MFGS(0.979)PGGLR ANLLDSM(45.72)FGSPGGLR ANLLDS(-16.77)MFGS(16.77)PGGLR 0 1 1 0 Q9HD72;A8K6Y8;A0A024R1H7;A0A024R1F8;Q59HH1;A0A024R1M5;Q9HBE1 Q9HD72 Q9HD72 ZNF278;PATZ1 POZ-, AT hook-, and zinc finger-containing protein 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 820.8734 2 815.86838 1629.72221 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.14 1 113.14 112.64 113.64 7.6294E-06 0 0 0 0.00134 1 67186 45.723 26.329 2 340 44 165 185 541 541 3 53 ANPFGGASHAK 11 1 0 Unmodified _ANPFGGASHAK_ 0 0 0 0 A8K517;P62266;D6RD47;D6RDJ2;D6RIX0;D6R9I7 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 532.7719 2 528.764697 1055.51484 82325.93 0.39958 0.00021128 -0.25952 -0.00013722 0.14006 7.406E-05 528.764573366285 532.771572475308 69.504 2.8635 69.504 69.232 72.095 0 1511 275 9 0 0 0 0.001175 5 34517 91.867 61.682 1 0.78856 0.9728 0 991460000 577570000 413880000 341 469 166 186 542;543;544;545;546 543 ANPFGGASHAK 11 1 0 Unmodified _ANPFGGASHAK_ 0 0 0 0 A8K517;P62266;D6RD47;D6RDJ2;D6RIX0;D6R9I7 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 355.517 3 352.845557 1055.51484 100059.4 -0.24277 -8.566E-05 0.086645 3.0572E-05 -0.15612 -5.5088E-05 352.845532958395 355.516920458512 69.518 1.96 69.518 69.298 71.258 0 772 192 7 0 0 0 0.020857 3 34732 30.004 22.784 1 0.77917 0.96363 0 312620000 172860000 139760000 342 469 166 186 547;548;549 548 ANPFGGASHAK 11 1 0 Unmodified _ANPFGGASHAK_ 0 0 0 0 A8K517;P62266;D6RD47;D6RDJ2;D6RIX0;D6R9I7 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 532.773 2 528.764697 1055.51484 83132.91 0.45969 0.00024307 0.10238 5.4135E-05 0.56207 0.0002972 528.764823627455 532.771791177839 72.411 0.49069 72.411 72.085 72.576 0 90 39 4 0 0 0 0.017973 1 36630 74.173 51.681 1 0.83233 1.0107 0 17812000 8945800 8866600 343 469 166 186 550 550 ANPFGGASHAK 11 1 0 Unmodified _ANPFGGASHAK_ 0 0 0 0 A8K517;P62266;D6RD47;D6RDJ2;D6RIX0;D6R9I7 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 355.5171 3 352.845557 1055.51484 101389.4 0.096484 3.4044E-05 -0.33607 -0.00011858 -0.23959 -8.4538E-05 352.845352067891 355.516755229268 19.313 0.19808 19.313 19.207 19.405 -1.9073E-06 35 7 6 0 0 0 0.0086704 1 6311 41.242 30.484 1 1.7339 1.3476 0 14988000 5786300 9201300 344 469 166 186 551 551 ANSGGVDLDSSGEFASIEK 19 1 0 2 Phospho (STY) _ANSGGVDLDS(ph)S(ph)GEFASIEK_ ANS(0.19)GGVDLDS(0.895)S(0.895)GEFAS(0.02)IEK ANS(-9.24)GGVDLDS(9.24)S(9.24)GEFAS(-19.21)IEK 0 0 2 0 A0A024QZU8;Q92766;A0A087X055 A0A024QZU8 A0A024QZU8 RREB1 Ras-responsive element-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1021.9042 2 1021.90321 2041.79188 61778.49 0.48726 0.00049794 0.42017 0.00042937 0.90743 0.00092731 1022.40492601326 1026.41286113247 108.58 0.65179 108.58 108.26 108.91 7.6294E-06 173 52 5 0 0 0 0.00023904 1 63527 41.86 41.86 6 0.40386 0.49818 0 23162000 14969000 8192200 345 19 167 187 552 552 22;23 ANSPEKPPEAGAAHKPR 17 2 1 Phospho (STY) _ANS(ph)PEKPPEAGAAHKPR_ ANS(1)PEKPPEAGAAHKPR ANS(185.58)PEKPPEAGAAHKPR 0 0 1 2 A0A140VJD0;Q9UFC0;F8WDB4;Q59FT0 A0A140VJD0 A0A140VJD0 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 613.2982 3 612.963263 1835.86796 76546.3 0.52782 0.00032354 0.09615 5.8936E-05 0.62397 0.00038247 612.963707006962 621.642112344919 15.262 0.5015 15.262 15.038 15.54 0 44 12 11 0 0 0 1.0618E-100 1 2910 185.58 174.73 1 0.30986 0.24943 0 234710000 101000000 133710000 346 375 168 188 553 553 595 ANSPEKPPEAGAAHKPR 17 2 1 Phospho (STY) _ANS(ph)PEKPPEAGAAHKPR_ ANS(1)PEKPPEAGAAHKPR ANS(135.21)PEKPPEAGAAHKPR 0 0 1 2 A0A140VJD0;Q9UFC0;F8WDB4;Q59FT0 A0A140VJD0 A0A140VJD0 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 466.4836 4 459.974267 1835.86796 88777.4 0.088313 4.0622E-05 0.12308 5.6612E-05 0.21139 9.7234E-05 459.974362766954 466.483413772277 15.262 0.36838 15.262 15.117 15.485 -9.5367E-07 38 8 10 0 0 0 1.1689E-37 2 2916 135.21 125.43 1 1.2378 1.0129 0 82676000 36514000 46162000 347 375 168 188 554;555 554 595 ANSPEKPPEAGAAHKPR 17 2 1 Phospho (STY) _ANS(ph)PEKPPEAGAAHKPR_ ANS(1)PEKPPEAGAAHKPR ANS(83.89)PEKPPEAGAAHKPR 0 0 1 2 A0A140VJD0;Q9UFC0;F8WDB4;Q59FT0 A0A140VJD0 A0A140VJD0 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 919.6403 2 918.941257 1835.86796 63351.04 0.56232 0.00051673 0.22193 0.00020394 0.78424 0.00072067 918.941512233941 931.959607232102 15.262 0.21692 15.262 15.158 15.375 0 22 4 9 0 0 0 9.8959E-10 1 2931 83.891 74.603 1 0.27003 0.22306 0 45399000 20571000 24828000 348 375 168 188 556 556 595 APAHHPAAISTAK 13 1 0 Unmodified _APAHHPAAISTAK_ 0 0 0 0 B3KMR5;Q5JTH9 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 427.2375 3 424.566683 1270.67822 94088.68 0.096703 4.1057E-05 -0.27403 -0.00011634 -0.17733 -7.5288E-05 424.566576294072 427.237801354364 76.572 1.2659 76.572 75.625 76.891 0 401 110 6 0 0 0 1.2891E-10 3 39804 107.53 99.129 1 1.2853 1.6156 0 53686000 19830000 33856000 349 576 169 189 557;558;559 559 APAPPPKPETPEK 13 2 0 Phospho (STY) _APAPPPKPET(ph)PEK_ APAPPPKPET(1)PEK APAPPPKPET(40.52)PEK 0 0 1 1 Q9ULL5 Q9ULL5 Q9ULL5 PRR12 Proline-rich protein 12 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 480.5723 3 480.237442 1437.6905 88036.04 -0.078217 -3.7563E-05 0.69349 0.00033304 0.61528 0.00029548 480.237857439978 485.580493236392 23.365 0.59101 23.365 23.049 23.64 0 142 32 6 0 0 0 0.0044463 1 9833 40.52 32.16 1 1.3811 1.1346 0 14562000 6276700 8285000 350 1238 170 190 560 560 3001 APDSLENVISNAVPGR 16 0 1 Phospho (STY) _APDS(ph)LENVISNAVPGR_ APDS(1)LENVISNAVPGR APDS(56.36)LENVIS(-56.36)NAVPGR 0 0 1 0 A0A0S2Z696;B4DE54;A0A0S2Z5M2;Q8N9N5 A0A0S2Z696 A0A0S2Z696 BANP Protein BANP MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 859.9101 2 859.909091 1717.80363 67294.01 0.84809 0.00072928 -0.13818 -0.00011882 0.70991 0.00061046 860.410732606179 865.413835148278 117.49 0.44463 117.49 117.27 117.72 0 86 39 4 0 0 0 8.3172E-07 1 70325 79.837 68.575 2 0.33126 0.36708 0 8555600 5866200 2689500 351 361 171 191 561 561 566 APGASPGNPLSPSLSDK 17 1 0 2 Phospho (STY) _APGAS(ph)PGNPLS(ph)PSLSDK_ APGAS(1)PGNPLS(0.898)PS(0.101)LS(0.001)DK APGAS(97.29)PGNPLS(9.49)PS(-9.49)LS(-32.22)DK 0 0 2 0 Q7Z5J4 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 877.8735 2 877.873532 1753.73251 64874.29 0.84745 0.00074396 0.091703 8.0504E-05 0.93916 0.00082446 877.87350686684 881.881111964627 92.556 1.2073 92.556 91.972 93.179 0 676 106 9 0 0 0 9.5412E-87 3 51124 181.34 169.12 6 0.53178 0.65869 0 155120000 94346000 60779000 352 1137 172 192 562;563;564 562 2173;2174;2175;2176 APGASPGNPLSPSLSDK 17 1 0 2 Phospho (STY) _APGASPGNPLS(ph)PSLS(ph)DK_ APGASPGNPLS(0.974)PS(0.041)LS(0.984)DK APGAS(-38.87)PGNPLS(15.77)PS(-15.77)LS(17.75)DK 0 0 2 0 Q7Z5J4 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 877.8754 2 877.873532 1753.73251 NaN NaN NaN -0.75478 -0.0006626 NaN NaN NaN NaN 91.697 0.55334 91.697 91.428 91.981 0 0 0 0 6.534E-07 1 50614 70.167 50.843 6 NaN NaN 0 13477000 13477000 0 353 1137 172 192 565 565 2173;2174;2175;2176 APGASPGNPLSPSLSDK 17 1 0 2 Phospho (STY) _APGASPGNPLS(ph)PSLS(ph)DK_ APGAS(0.001)PGNPLS(0.982)PS(0.331)LS(0.686)DK APGAS(-30.55)PGNPLS(16.02)PS(-3.28)LS(3.28)DK 0 0 2 0 Q7Z5J4 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 881.8836 2 877.873532 1753.73251 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.665 1 91.665 91.165 92.165 7.6294E-06 0 0 0 0.0012118 1 50698 51.495 38.068 6 354 1137 172 192 566 566 2173;2174;2175;2176 APGASPGNPLSPSLSDK 17 1 0 2 Phospho (STY) _APGASPGNPLS(ph)PS(ph)LSDK_ APGASPGNPLS(0.997)PS(0.782)LS(0.221)DK APGAS(-37.59)PGNPLS(24.28)PS(5.53)LS(-5.53)DK 0 0 2 0 Q7Z5J4 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 881.8624 2 877.873532 1753.73251 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.784 1 91.784 91.284 92.284 7.6294E-06 0 0 0 8.5567E-05 1 50800 62.377 48.95 6 355 1137 172 192 567 567 2173;2174;2175;2176 APGASPGNPLSPSLSDK 17 1 0 Phospho (STY) _APGASPGNPLS(ph)PSLSDK_ APGASPGNPLS(0.957)PS(0.032)LS(0.011)DK APGAS(-44.14)PGNPLS(14.72)PS(-14.72)LS(-19.47)DK 0 0 1 0 Q7Z5J4 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 841.9014 2 837.890367 1673.76618 NaN NaN NaN 2.0148 0.0016882 NaN NaN NaN NaN 85.629 0.74447 85.629 85.317 86.062 0 0 0 0 7.869E-08 2 46219 80.738 63.371 4 NaN NaN 0 23362000 0 23362000 356 1137 172 193 568;569 568 2173;2174;2175;2176 APGASPGNPLSPSLSDK 17 1 0 Phospho (STY) _APGASPGNPLS(ph)PSLSDK_ APGASPGNPLS(0.868)PS(0.098)LS(0.034)DK APGAS(-42.29)PGNPLS(9.46)PS(-9.46)LS(-14.08)DK 0 0 1 0 Q7Z5J4 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 841.8991 2 837.890367 1673.76618 NaN NaN NaN 1.0004 0.00083821 NaN NaN NaN NaN 88.829 1.0688 88.829 88.219 89.288 0 0 0 0 1.1238E-06 1 57124 62.469 48.505 4 NaN NaN 0 71708000 0 71708000 357 1137 172 193 570 570 2173;2174;2175;2176 APIDTSDVEEK 11 1 0 Phospho (STY) _APIDTS(ph)DVEEK_ APIDT(0.008)S(0.992)DVEEK APIDT(-20.85)S(20.85)DVEEK 0 0 1 0 B4DXG8;D6RIY6;A5PLM5;Q06265 B4DXG8 B4DXG8 EXOSC9 Exosome complex component RRP45 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 642.274 2 642.273773 1282.53299 75855.73 0.84163 0.00054056 -0.1278 -8.2083E-05 0.71383 0.00045848 642.273779459226 646.280748099423 59.288 1.4257 59.288 58.491 59.917 0 648 114 10 0 0 0 1.0179E-34 2 26158 158.01 130.27 2 0.60484 0.74933 0 141790000 88749000 53046000 358 424 173 194 571;572 571 734;2724 APIDTSDVEEK 11 1 0 Phospho (STY) _APIDT(ph)SDVEEK_ APIDT(0.504)S(0.496)DVEEK APIDT(0.08)S(-0.08)DVEEK 0 0 1 0 B4DXG8;D6RIY6;A5PLM5;Q06265 B4DXG8 B4DXG8 EXOSC9 Exosome complex component RRP45 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 642.2745 2 642.273773 1282.53299 76256.16 1.1587 0.0007442 0.084067 5.3994E-05 1.2428 0.00079819 642.273831639741 646.280894140048 55.067 1.6809 55.067 54.313 55.994 -3.8147E-06 970 147 10 0 0 0 0.0053407 3 33772 82.85 64.539 2 0.78098 0.52191 0 181830000 101580000 80253000 359 424 173 194 573;574;575 575 734;2724 APKDSEEIDDVTR 13 1 1 Phospho (STY) _APKDS(ph)EEIDDVTR_ APKDS(1)EEIDDVTR APKDS(42.71)EEIDDVT(-42.71)R 0 0 1 1 Q05DU0;Q0VGM7;Q9Y6G0;Q9Y388 Q05DU0 Q05DU0 RBMX2 RNA-binding motif protein, X-linked 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 777.8391 2 777.8378 1553.66105 70436.12 0.77018 0.00059908 0.34088 0.00026515 1.1111 0.00086422 777.837843945125 786.849807896809 64.34 0.52325 64.34 64.125 64.648 0 142 36 6 0 0 0 7.8617E-07 2 30744 97.904 78.341 2 0.86194 1.0045 0 32226000 15565000 16660000 360 1039 174 195 576;577 577 1932 APKPDGPGGGPGGSHMGGNYGDDR 24 1 1 Oxidation (M) _APKPDGPGGGPGGSHM(ox)GGNYGDDR_ APKPDGPGGGPGGSHM(1)GGNYGDDR APKPDGPGGGPGGSHM(115.38)GGNYGDDR 0 1 0 1 Q59H57;B4DR70;A8K4H1;Q8TBR3;Q6IBQ5;H3BPE7;Q13344;P35637 Q59H57 Q59H57 FUS RNA-binding protein FUS MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 572.5035 4 567.997628 2267.96141 78866.63 0.4436 0.00025196 -0.078066 -4.4341E-05 0.36553 0.00020762 568.248099049287 572.503235023018 64.888 0.3959 64.888 64.683 65.079 0 142 28 8 0 0 0 1.448E-37 1 31012 115.38 115.38 1 3.1361 3.7559 0 125570000 38083000 87485000 361 461 175 196 578 578 121 APLKPYPVSPSDK 13 2 0 Phospho (STY) _APLKPYPVS(ph)PSDK_ APLKPY(0.001)PVS(0.953)PS(0.046)DK APLKPY(-29.57)PVS(13.21)PS(-13.21)DK 0 0 1 1 Q5TCC6;Q9P1N9;Q7L4K8;B4DVX2;Q6P0M4;Q7Z355;J3KR24;Q7Z3U5;A0A0A0MSX9;Q59G75;P41252 Q5TCC6 Q5TCC6 IARS;DKFZp686L17145;DKFZp686L0869 Isoleucine--tRNA ligase, cytoplasmic ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 747.8843 2 739.868175 1477.7218 NaN NaN NaN 0.12309 9.1074E-05 NaN NaN NaN NaN 73.83 0.77478 73.83 73.368 74.143 0 0 0 0 0.0033128 1 37518 64.104 35.2 3 NaN NaN 0 10502000 0 10502000 362 295 176 197 579 579 473 APLKPYPVSPSDK 13 2 0 Phospho (STY) _APLKPYPVS(ph)PSDK_ APLKPY(0.002)PVS(0.92)PS(0.078)DK APLKPY(-25.91)PVS(10.73)PS(-10.73)DK 0 0 1 1 Q5TCC6;Q9P1N9;Q7L4K8;B4DVX2;Q6P0M4;Q7Z355;J3KR24;Q7Z3U5;A0A0A0MSX9;Q59G75;P41252 Q5TCC6 Q5TCC6 IARS;DKFZp686L17145;DKFZp686L0869 Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 747.8834 2 739.868175 1477.7218 72598.83 1.1516 0.00085205 -0.42858 -0.00031709 0.72304 0.00053496 739.867520880891 747.882392877851 59.925 2.5718 59.925 58.295 60.867 -3.8147E-06 768 241 4 0 0 0 0.0010225 2 36885 71.279 63.555 3 0.86339 0.71208 0 20511000 10839000 9671600 363 295 176 197 580;581 580 473 APLNIPGTPVLEDFPQNDDEK 21 1 0 Phospho (STY) _APLNIPGT(ph)PVLEDFPQNDDEK_ APLNIPGT(1)PVLEDFPQNDDEK APLNIPGT(102.37)PVLEDFPQNDDEK 0 0 1 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1195.5538 2 1195.05159 2388.08864 56259.27 0.38707 0.00046257 0.079196 9.4644E-05 0.46626 0.00055721 1195.5535599698 1199.56050662232 124.61 0.87221 124.61 124.24 125.11 0 408 79 6 0 0 0 3.9596E-28 2 75385 102.37 102.37 1 0.76708 0.94821 0 394590000 212330000 182260000 364 464 177 198 582;583 583 2735 APLQSAVVTNAVSPAELTPK 20 1 0 2 Phospho (STY) _APLQSAVVTNAVS(ph)PAELT(ph)PK_ APLQSAVVT(0.001)NAVS(0.999)PAELT(1)PK APLQS(-74.4)AVVT(-30.29)NAVS(30.29)PAELT(51.24)PK 0 0 2 0 B3KXW2;A0A024R283;Q9HCE3 B3KXW2 B3KXW2 ZNF532 Zinc finger protein 532 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1077.522 2 1077.01818 2152.02182 59199.59 0.36811 0.00039646 -0.10365 -0.00011163 0.26446 0.00028483 1077.52076952848 1081.52650879405 112.11 0.51402 112.11 111.86 112.37 0 139 45 6 0 0 0 2.5371E-22 3 66379 103.73 90.754 6 0.2076 0.26111 0 28947000 21427000 7519400 365 61 178 199 584;585;586 584 81;2623 APLQSAVVTNAVSPAELTPK 20 1 0 Phospho (STY) _APLQSAVVTNAVS(ph)PAELTPK_ APLQS(0.003)AVVT(0.394)NAVS(0.578)PAELT(0.025)PK APLQS(-23.23)AVVT(-1.66)NAVS(1.66)PAELT(-13.56)PK 0 0 1 0 B3KXW2;A0A024R283;Q9HCE3 B3KXW2 B3KXW2 ZNF532 Zinc finger protein 532 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1037.0378 2 1037.03502 2072.05549 NaN NaN NaN 0.57987 0.00060135 NaN NaN NaN NaN 112.89 0.33415 112.89 112.73 113.06 0 0 0 0 1.8031E-05 1 67002 49.773 41.468 4 NaN NaN 0 7462200 7462200 0 366 61 178 200 587 587 81;2623 APRPTRPDK 9 1 2 Unmodified _APRPTRPDK_ 0 0 0 2 A0A024R2Q4;P61313;B4DLP4;E7EQV9;E7EX53;E7ENU7;B4DEN1;Q76N55;E7ERA2 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 346.5332 3 346.533202 1036.57778 98485.94 -0.25986 -9.0052E-05 0.18497 6.4098E-05 -0.074895 -2.5954E-05 346.533234707882 355.876830797355 65.634 0.59209 65.634 65.364 65.956 0 222 44 7 0 0 0 0.011384 1 31546 38.567 18.577 1 0.80879 0.95919 0 239680000 135310000 104370000 367 68 179 201 588 588 APSLTNDEVEEFR 13 0 1 Phospho (STY) _APS(ph)LTNDEVEEFR_ APS(1)LTNDEVEEFR APS(37.06)LT(-37.06)NDEVEEFR 0 0 1 0 Q86VR6;B4DKX3;E9PIF2;Q59EC7;Q13206 Q86VR6 Q86VR6 DDX10 Probable ATP-dependent RNA helicase DDX10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 793.8413 2 793.840343 1585.66613 68576.99 1.0694 0.00084892 -0.21652 -0.00017188 0.85287 0.00067704 793.840024979796 798.844211290051 94.738 0.83482 94.738 94.329 95.164 0 332 64 7 0 0 0 1.3101E-16 2 53047 125.61 99.953 2 0.51282 0.6473 0 84104000 55967000 28137000 368 633 180 202 589;590 589 1047 APSLTNDEVEEFR 13 0 1 Phospho (STY) _APS(ph)LTNDEVEEFR_ APS(0.995)LT(0.005)NDEVEEFR APS(22.84)LT(-22.84)NDEVEEFR 0 0 1 0 Q86VR6;B4DKX3;E9PIF2;Q59EC7;Q13206 Q86VR6 Q86VR6 DDX10 Probable ATP-dependent RNA helicase DDX10 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 794.3417 2 793.840343 1585.66613 67247.38 1.2193 0.00096796 -0.25291 -0.00020077 0.96643 0.00076719 793.839995656106 798.844299549687 100.34 1.0495 100.34 99.781 100.83 7.6294E-06 571 100 7 0 0 0 3.0781E-14 2 64290 113.25 86.739 2 0.87236 0.59146 0 65072000 35158000 29915000 369 633 180 202 591;592 591 1047 APSPPLSQVFQTR 13 0 1 Phospho (STY) _APS(ph)PPLSQVFQTR_ APS(1)PPLSQVFQTR APS(36.32)PPLS(-36.32)QVFQT(-54.17)R 0 0 1 0 B4DR76;B1AKL4;A0A024R1K0;Q9NRA8 B4DR76 B4DR76 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 754.3718 2 754.368873 1506.72319 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.41 1 113.41 112.91 113.91 0 0 0 0 0.00022581 1 67378 60.255 41.798 3 370 46 181 203 593 593 55 APSPPVEHPR 10 0 1 Phospho (STY) _APS(ph)PPVEHPR_ APS(1)PPVEHPR APS(56.36)PPVEHPR 0 0 1 0 Q86WR7 Q86WR7 Q86WR7 PROSER2 Proline and serine-rich protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 389.5167 3 389.516651 1165.52812 95261.27 -0.43251 -0.00016847 0.26815 0.00010445 -0.16436 -6.4022E-05 389.516675889682 392.852826583695 51.819 1.043 51.819 51.348 52.391 0 323 83 6 0 0 0 0.0039161 1 21103 56.359 44.44 1 1.1558 1.3736 0 15454000 6749900 8704400 371 1140 182 204 594 594 2186 APSPTAEQPPGGGDSAR 17 0 1 Phospho (STY) _APS(ph)PTAEQPPGGGDSAR_ APS(0.961)PT(0.039)AEQPPGGGDSAR APS(13.87)PT(-13.87)AEQPPGGGDS(-50.44)AR 0 0 1 0 Q15742 Q15742 Q15742 NAB2 NGFI-A-binding protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 842.8651 2 837.859598 1673.70464 67475.25 0.80109 0.0006712 0.40365 0.0003382 1.2047 0.0010094 837.859595253995 842.864428769649 40.04 0.74167 40.04 39.666 40.408 0 309 65 6 0 0 0 6.9054E-05 1 14036 54.343 41.335 3 1.7734 1.9287 0 4135400 1516700 2618700 372 1074 183 205 595 595 2029 APTAALPQGVVMAASPGSLHSPQQLAEEATR 31 0 1 Oxidation (M),2 Phospho (STY) _APTAALPQGVVM(ox)AAS(ph)PGS(ph)LHSPQQLAEEATR_ APTAALPQGVVM(1)AASPGSLHSPQQLAEEATR APT(0.001)AALPQGVVMAAS(0.839)PGS(0.557)LHS(0.557)PQQLAEEAT(0.047)R APTAALPQGVVM(41.65)AASPGSLHSPQQLAEEATR APT(-30.71)AALPQGVVMAAS(4.6)PGS(0)LHS(0)PQQLAEEAT(-11.74)R 0 1 2 0 E9PAR2;E9PB41;Q59FC7;C9IYM9;C9K092;J3KR46;G5E998;J3KQC0;Q03060 E9PAR2 E9PAR2 CREM cAMP-responsive element modulator MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1091.8428 3 1087.83855 3260.49381 58316.23 0.47479 0.0005165 -0.10626 -0.00011559 0.36854 0.00040091 1088.50680794932 1091.84285392826 116.89 0.59131 116.89 116.6 117.19 0 495 52 12 0 0 0 8.0297E-07 1 69909 41.65 41.65 10 1.0564 1.3353 0 178940000 87803000 91137000 373 734 184 206 596 596 193 1235;1236;1237 APTSTEANHIR 11 0 1 Unmodified _APTSTEANHIR_ 0 0 0 0 E9PFK5;A8KA74;P78316 E9PFK5 E9PFK5 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 402.8758 3 399.538793 1195.59455 102935.2 -0.16598 -6.6317E-05 0.75164 0.00030031 0.58566 0.00023399 399.539086283205 402.875337670647 60.703 0.23859 60.703 60.562 60.801 -3.8147E-06 53 18 4 0 0 0 0.011765 1 27729 37.18 37.18 1 1.5935 1.7472 0 7057500 2132300 4925100 374 507 185 207 597 597 APVPSTCSSTFPEELSPPSHQAK 23 1 0 Phospho (STY) _APVPSTCSSTFPEELS(ph)PPSHQAK_ APVPSTCSSTFPEELS(0.959)PPS(0.04)HQAK APVPS(-35.38)T(-35.38)CS(-35.04)S(-35.38)T(-35.04)FPEELS(13.83)PPS(-13.83)HQAK 0 0 1 0 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;A0A024R5G4;Q3SYK8;F5H6Y5;F5H4J1;A8K394;F5H0Z7;F5H763;Q86XH4 A0A087WY61 A0A087WY61 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 848.3892 3 845.380483 2533.11962 66069.73 1.1741 0.00099258 -0.36675 -0.00031005 0.80736 0.00068253 845.714536698359 848.38598068407 93.071 1.0692 93.071 92.515 93.584 0 599 88 9 0 0 0 7.9834E-10 2 51997 60.951 60.419 7 0.8645 1.0731 0 105990000 58669000 47322000 375 110 186 208 598;599 599 144 APVQPQQSPAAAPGGTDEK 19 1 0 Phospho (STY) _APVQPQQS(ph)PAAAPGGTDEK_ APVQPQQS(1)PAAAPGGTDEK APVQPQQS(50.48)PAAAPGGT(-50.48)DEK 0 0 1 0 F8WBS8;C9JPC0;Q9NSM5;B4DM22;Q59EG8;Q13200 F8WBS8 F8WBS8 PSMD2;DKFZp564A2282 26S proteasome non-ATPase regulatory subunit 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 968.9484 2 964.941119 1927.86769 62306.61 0.48878 0.00047164 -0.11565 -0.00011159 0.37313 0.00036005 964.940864219889 968.948383352109 43.357 1.3407 43.357 42.766 44.107 3.8147E-06 760 96 12 0 0 0 8.8839E-10 2 15993 68.41 54.748 2 0.92362 1.1455 0 118110000 61048000 57059000 376 639 187 209 600;601 601 1056 AQAAAPASVPAQAPK 15 1 0 Unmodified _AQAAAPASVPAQAPK_ 0 0 0 0 A0A024R326;Q6IPI1;P47914 A0A024R326 A0A024R326 RPL29 60S ribosomal protein L29 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 693.3859 2 689.377883 1376.74121 75657.13 0.55634 0.00038353 0.00045188 3.1152E-07 0.55679 0.00038384 689.377802895886 693.384883367629 58.147 0.51752 58.147 57.862 58.379 -3.8147E-06 130 39 4 0 0 0 0.0023668 1 25719 66.267 66.267 1 0.6677 0.79202 0 9547400 5614400 3933000 377 72 188 210 602 602 AQALEDLAGFK 11 1 0 Unmodified _AQALEDLAGFK_ 0 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-SECPEP 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 585.8165 2 581.808771 1161.60299 83049.81 0.88123 0.0005127 0.0011764 6.8446E-07 0.8824 0.00051339 581.808760300826 585.815866270272 100.77 0.65511 100.77 100.49 101.14 0 117 62 4 0 0 0 0.027274 1 64684 51.445 43.52 1 3.4022 2.9241 0 3973600 918530 3055100 378 994 189 211 603 603 AQHEDQVEQYK 11 1 0 Unmodified _AQHEDQVEQYK_ 0 0 0 0 P02545;W8QEH3;Q5TCI8;Q5I6Y5;Q3BDU5;Q8N519;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 458.881 3 458.880996 1373.62116 88774.26 0.24148 0.00011081 0.095666 4.3899E-05 0.33715 0.00015471 458.880898344628 461.552209851311 64.078 0.35477 64.078 63.895 64.25 0 183 23 12 0 0 0 0.00035325 2 30318 65.179 56.795 1 1.2768 1.579 0 316740000 141510000 175230000 379 954 190 212 604;605 604 AQHEDQVEQYK 11 1 0 Unmodified _AQHEDQVEQYK_ 0 0 0 0 P02545;W8QEH3;Q5TCI8;Q5I6Y5;Q3BDU5;Q8N519;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 687.8177 2 687.817855 1373.62116 73441.13 0.71666 0.00049293 0.37488 0.00025785 1.0915 0.00075078 687.818118523966 691.824951410362 64.077 0.2931 64.077 63.924 64.217 0 83 19 6 0 0 0 1.4757E-13 2 30420 134.3 114.52 1 1.2186 1.516 0 79523000 37907000 41616000 380 954 190 212 606;607 607 AQHEDQVEQYKK 12 2 0 Unmodified _AQHEDQVEQYKK_ 0 0 0 1 P02545;W8QEH3;Q5TCI8;Q5I6Y5;Q3BDU5;Q8N519;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 506.9223 3 501.579317 1501.71612 85617.69 0.50463 0.00025311 -0.32161 -0.00016131 0.18302 9.1798E-05 501.579105233686 506.92198307476 67.607 0.71658 67.607 67.286 68.003 0 308 61 6 0 0 0 0.00052693 1 33296 74.987 59.448 1 1.2732 1.6336 0 107140000 44891000 62253000 381 954 191 213 608 608 AQHPDYSFGELSR 13 0 1 Phospho (STY) _AQHPDYS(ph)FGELSR_ AQHPDY(0.002)S(0.663)FGELS(0.335)R AQHPDY(-25.9)S(2.97)FGELS(-2.97)R 0 0 1 0 E7EVG2;Q86U86;Q9NVM2;Q5EBM5 E7EVG2 E7EVG2 PBRM1;PB1 Protein polybromo-1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 798.8401 2 793.835395 1585.65624 68287.69 1.2725 0.0010101 0.41518 0.00032958 1.6876 0.0013397 793.835501335513 798.840202601191 93.554 0.91893 93.554 93.145 94.064 -7.6294E-06 285 75 5 0 0 0 0.0056249 1 51959 50.155 41.105 3 0.57404 0.71384 0 36593000 22470000 14123000 382 794 192 214 609 609 1362;1363 AQHPDYSFGELSR 13 0 1 Phospho (STY) _AQHPDYSFGELS(ph)R_ AQHPDYS(0.348)FGELS(0.652)R AQHPDY(-34.21)S(-2.73)FGELS(2.73)R 0 0 1 0 E7EVG2;Q86U86;Q9NVM2;Q5EBM5 E7EVG2 E7EVG2 PBRM1;PB1 Protein polybromo-1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 798.8401 2 793.835395 1585.65624 70580.41 0.98702 0.00078353 0.59495 0.00047229 1.582 0.0012558 794.337024182529 798.840150661625 85.016 0.73907 85.016 84.497 85.236 0 196 67 4 0 0 0 0.0059887 1 54430 47.189 32.398 3 1.3253 1.0536 0 11371000 4194600 7176200 383 794 192 214 610 610 1362;1363 AQLEPVASPAK 11 1 0 Phospho (STY) _AQLEPVAS(ph)PAK_ AQLEPVAS(1)PAK AQLEPVAS(114.24)PAK 0 0 1 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 599.8018 2 595.794479 1189.5744 79520.91 0.56164 0.00033462 -0.1599 -9.5269E-05 0.40174 0.00023935 595.794491083996 599.801576758801 58.512 1.4842 58.512 57.766 59.25 -3.8147E-06 568 119 7 0 0 0 6.4108E-09 4 26167 114.24 88.122 1 1.2332 1.5332 0 86186000 37824000 48362000 384 1070 193 215 611;612;613;614 613 2013 AQLEPVASPAK 11 1 0 Phospho (STY) _AQLEPVAS(ph)PAK_ AQLEPVAS(1)PAK AQLEPVAS(73.08)PAK 0 0 1 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 599.8018 2 595.794479 1189.5744 78836.91 1.0682 0.00063645 -0.25476 -0.00015179 0.81347 0.00048466 595.794741210015 599.801410375764 50.446 1.4304 50.446 49.846 51.276 0 668 130 8 0 0 0 0.002158 2 30646 73.082 64.121 1 4.0093 2.6591 0 76302000 13243000 63059000 385 1070 193 215 615;616 616 2013 AQLGGPEAAKSDETAAK 17 2 0 Phospho (STY) _AQLGGPEAAKS(ph)DETAAK_ AQLGGPEAAKS(0.744)DET(0.256)AAK AQLGGPEAAKS(4.64)DET(-4.64)AAK 0 0 1 1 V9HW43;P04792;B4DL87;C9J3N8 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 575.2682 3 575.268129 1722.78256 79905.46 0.66579 0.00038301 -0.19987 -0.00011498 0.46592 0.00026803 575.268060904656 580.610777072249 48.731 0.82229 48.731 48.25 49.072 0 349 54 8 0 0 0 4.0156E-07 1 19030 76.492 66.835 2 0.87595 1.0575 0 29330000 15640000 13690000 386 955 194 216 617 617 1666 AQLGGPEAAKSDETAAK 17 2 0 Phospho (STY) _AQLGGPEAAKS(ph)DETAAK_ AQLGGPEAAKS(0.997)DET(0.003)AAK AQLGGPEAAKS(24.56)DET(-24.56)AAK 0 0 1 1 V9HW43;P04792;B4DL87;C9J3N8 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 870.4133 2 862.398556 1722.78256 64755.13 1.0229 0.00088218 -0.43178 -0.00037237 0.59116 0.00050981 862.397959265843 870.412627612131 26.217 0.36966 26.217 26.02 26.39 0 94 17 8 0 0 0 6.0053E-13 2 12307 99.881 88.51 2 0.90238 0.69548 0 43740000 23959000 19782000 387 955 194 216 618;619 619 1666 AQLGGPEAAKSDETAAK 17 2 0 Phospho (STY) _AQLGGPEAAKS(ph)DETAAK_ AQLGGPEAAKS(0.977)DET(0.023)AAK AQLGGPEAAKS(16.31)DET(-16.31)AAK 0 0 1 1 V9HW43;P04792;B4DL87;C9J3N8 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 575.2688 3 575.268129 1722.78256 79184.73 0.61271 0.00035247 0.055842 3.2124E-05 0.66855 0.0003846 575.602528167041 580.611049076985 26.212 0.62811 26.212 25.865 26.493 0 127 24 9 0 0 0 9.1092E-10 1 12308 83.871 79.811 2 0.98521 0.75155 0 48984000 26216000 22768000 388 955 194 216 620 620 1666 AQLGLGHSYSR 11 0 1 Unmodified _AQLGLGHSYSR_ 0 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 400.2111 3 396.875516 1187.60472 93627.26 -0.31452 -0.00012483 0.036014 1.4293E-05 -0.27851 -0.00011053 396.875145100093 400.211958875348 79.587 1.6329 79.587 78.687 80.32 0 471 147 6 0 0 0 0.0069125 2 41718 43.549 39.461 1 0.70723 0.8925 0 74560000 41595000 32965000 389 504 195 217 621;622 621 AQLMAEQEK 9 1 0 Oxidation (M) _AQLM(ox)AEQEK_ AQLM(1)AEQEK AQLM(45.72)AEQEK 0 1 0 0 P32456 P32456 P32456 GBP2 Interferon-induced guanylate-binding protein 2 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 536.2643 2 532.258056 1062.50156 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.04 1 64.04 63.54 64.54 0 0 0 0 0.017128 1 39880 45.718 19.116 1 390 984 196 218 623 623 275 AQPFGFIDSDTDAEEER 17 0 1 Phospho (STY) _AQPFGFIDS(ph)DTDAEEER_ AQPFGFIDS(0.807)DT(0.193)DAEEER AQPFGFIDS(6.21)DT(-6.21)DAEEER 0 0 1 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1003.9063 2 1003.9044 2005.79425 NaN NaN NaN 0.21078 0.0002116 NaN NaN NaN NaN 110.07 0.56454 110.07 109.81 110.38 0 0 0 0 1.3542E-06 1 64769 64.454 51.027 2 NaN NaN 0 10204000 10204000 0 391 1059 197 219 624 624 1976 AQPLEDLAGFTELSETSGHTQESLTAGK 28 1 0 Unmodified _AQPLEDLAGFTELSETSGHTQESLTAGK_ 0 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 976.1469 3 973.140235 2916.39888 60389.8 0.73354 0.00071383 0.90138 0.00087717 1.6349 0.001591 973.810828938543 976.146276742781 122.92 0.68962 122.92 122.69 123.38 0 410 62 9 0 0 0 6.9882E-05 2 79421 32.985 32.985 1 3.5049 2.3249 0 76978000 19775000 57204000 392 994 198 220 625;626 625 AQPLEDLAGLK 11 1 0 Unmodified _AQPLEDLAGLK_ 0 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 581.8317 2 577.824421 1153.63429 82417.86 0.80589 0.00046566 0.1174 6.7839E-05 0.9233 0.0005335 577.824479378384 581.831630595308 106.32 0.53633 106.32 106.02 106.56 0 82 34 4 0 0 0 0.032191 1 61785 53.327 48.344 1 1.6563 1.9638 0 6917800 3462200 3455600 393 994 199 221 627 627 AQSLVISPPAPSPR 14 0 1 Phospho (STY) _AQSLVIS(ph)PPAPSPR_ AQSLVIS(1)PPAPSPR AQS(-98.24)LVIS(37.99)PPAPS(-37.99)PR 0 0 1 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 755.3895 2 750.384523 1498.75449 69778.02 1.0947 0.00082145 -0.015831 -1.1879E-05 1.0789 0.00080957 750.384905919654 755.388610172952 97.496 3.1637 97.496 96.568 99.732 7.6294E-06 1787 264 10 0 0 0 2.1832E-51 6 55484 165.34 141.09 3 1.6059 2.0407 0 3783500000 1455500000 2327900000 394 994;1130 200 222 628;629;630;631;632;633 631 1771;1772 AQSLVISPPAPSPR 14 0 1 Phospho (STY) _AQSLVIS(ph)PPAPSPR_ AQSLVIS(0.996)PPAPS(0.004)PR AQS(-50.87)LVIS(24)PPAPS(-24)PR 0 0 1 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 755.3895 2 750.384523 1498.75449 69247.04 0.74873 0.00056183 -0.2643 -0.00019833 0.48442 0.0003635 750.886637390708 755.388602958407 145.27 0.058502 145.27 145.25 145.31 0 10 2 5 0 0 0 2.5569E-08 1 83682 97.836 82.08 3 1.7398 1.9941 0 11710000 4349000 7360600 395 994;1130 200 222 634 634 1771;1772 AQSLVISPPAPSPR 14 0 1 Phospho (STY) _AQSLVIS(ph)PPAPSPR_ AQSLVIS(0.971)PPAPS(0.029)PR AQS(-46.85)LVIS(15.19)PPAPS(-15.19)PR 0 0 1 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 755.392 2 750.384523 1498.75449 NaN NaN NaN 2.683 0.0020133 NaN NaN NaN NaN 92.691 0.62862 92.691 92.289 92.918 0 0 0 0 0.0004508 1 51365 71.08 58.124 3 NaN NaN 0 13120000 0 13120000 396 994;1130 200 222 635 635 1771;1772 AQSLVISPPAPSPR 14 0 1 Phospho (STY) _AQSLVIS(ph)PPAPSPR_ AQS(0.004)LVIS(0.851)PPAPS(0.144)PR AQS(-22.99)LVIS(7.71)PPAPS(-7.71)PR 0 0 1 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 750.3856 2 750.384523 1498.75449 NaN NaN NaN -0.47653 -0.00035758 NaN NaN NaN NaN 93.1 0.42702 93.1 92.741 93.168 0 0 0 0 0.0071255 1 51514 40.857 22.034 3 NaN NaN 0 5274000 5274000 0 397 994;1130 200 222 636 636 1771;1772 AQSLVISPPAPSPR 14 0 1 Phospho (STY) _AQSLVIS(ph)PPAPSPR_ AQSLVIS(0.988)PPAPS(0.012)PR AQS(-73.04)LVIS(19.33)PPAPS(-19.33)PR 0 0 1 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 750.3857 2 750.384523 1498.75449 69231.94 1.01 0.00075786 -0.13968 -0.00010481 0.87029 0.00065305 750.38570117267 755.389305508156 102.15 3.6413 102.15 101.41 105.05 0 2562 353 13 0 0 0 4.9579E-19 5 65983 119.45 95.192 3 3.096 1.9362 0 3616100000 867350000 2748700000 398 994;1130 200 222 637;638;639;640;641 640 1771;1772 AQSLVISPPAPSPR 14 0 1 Phospho (STY) _AQSLVIS(ph)PPAPSPR_ AQSLVIS(0.966)PPAPS(0.034)PR AQS(-43.66)LVIS(14.56)PPAPS(-14.56)PR 0 0 1 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 755.3893 2 750.384523 1498.75449 NaN NaN NaN -4.0047 -0.0030051 NaN NaN NaN NaN 86.102 0.76115 86.102 85.847 86.608 7.6294E-06 0 0 0 0.0005885 1 55283 66.568 52.007 3 NaN NaN 0 14547000 0 14547000 399 994;1130 200 222 642 642 1771;1772 AQSLVISPPAPSPR 14 0 1 Phospho (STY) _AQSLVIS(ph)PPAPSPR_ AQSLVIS(0.858)PPAPS(0.142)PR AQS(-49.95)LVIS(7.8)PPAPS(-7.8)PR 0 0 1 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 755.3889 2 750.384523 1498.75449 NaN NaN NaN -0.065288 -4.8991E-05 NaN NaN NaN NaN 143.58 0.48019 143.58 143.41 143.89 0 0 0 0 0.00038211 1 88682 72.315 56.178 3 NaN NaN 0 1345300 0 1345300 400 994;1130 200 222 643 643 1771;1772 AQSLVISPPAPSPR 14 0 1 2 Phospho (STY) _AQSLVIS(ph)PPAPS(ph)PR_ AQSLVIS(1)PPAPS(1)PR AQS(-72.79)LVIS(72.79)PPAPS(114.69)PR 0 0 2 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 795.3725 2 790.367689 1578.72082 68048.83 1.5938 0.0012597 -0.057248 -4.5247E-05 1.5366 0.0012145 790.36781387653 795.371693987585 101.78 1.9685 101.78 100.83 102.8 0 1063 157 10 0 0 0 3.7267E-62 3 58550 168.69 143.76 3 1.3009 1.6469 0 453630000 196240000 257390000 401 994;1130 200 223 644;645;646 644 1771;1772 AQSLVISPPAPSPR 14 0 1 2 Phospho (STY) _AQSLVIS(ph)PPAPS(ph)PR_ AQSLVIS(1)PPAPS(1)PR AQS(-74.88)LVIS(74.88)PPAPS(100.51)PR 0 0 2 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 790.3673 2 790.367689 1578.72082 67955.67 1.256 0.00099267 -1.0647 -0.00084148 0.1913 0.0001512 790.36663944525 795.371112501972 111.55 2.1837 111.55 110.68 112.87 0 1215 213 10 0 0 0 1.081E-33 4 71576 144.3 118.98 3 2.7201 1.7836 0 342750000 96935000 245820000 402 994;1130 200 223 647;648;649;650 648 1771;1772 AQSLVISPPAPSPRK 15 1 1 2 Phospho (STY) _AQSLVIS(ph)PPAPS(ph)PRK_ AQSLVIS(1)PPAPS(1)PRK AQS(-37.92)LVIS(37.92)PPAPS(54.6)PRK 0 0 2 1 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 854.4162 2 854.41517 1706.81579 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.066 1 88.066 87.566 88.566 -7.6294E-06 0 0 0 3.6767E-07 1 48009 70.783 59.169 3 403 994;1130 201 224 651 651 1771;1772 AQSLVISPPAPSPRK 15 1 1 2 Phospho (STY) _AQSLVIS(ph)PPAPS(ph)PRK_ AQSLVIS(1)PPAPS(1)PRK AQS(-40.29)LVIS(40.29)PPAPS(57.73)PRK 0 0 2 1 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 863.4272 2 854.41517 1706.81579 65423.29 1.1259 0.00096197 -0.070743 -6.0444E-05 1.0551 0.00090153 854.916295017366 863.426431530689 91.178 1.7757 91.178 90.467 92.243 0 1093 172 9 0 0 0 0.00026294 1 58973 64.298 57.915 3 2.8744 2.2201 0 137370000 33417000 103950000 404 994;1130 201 224 652 652 1771;1772 AQSYDIQAWK 10 1 0 Phospho (STY) _AQS(ph)YDIQAWK_ AQS(1)YDIQAWK AQS(49.95)Y(-49.95)DIQAWK 0 0 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 645.2825 2 645.281735 1288.54892 76269.88 0.80164 0.00051729 0.27329 0.00017635 1.0749 0.00069364 645.281867361923 649.288978158854 88.557 1.6239 88.557 87.752 89.376 0 778 146 8 0 0 0 2.6959E-08 4 48382 128.28 102.85 2 0.60094 0.74458 0 134040000 84481000 49556000 405 1167 202 225 653;654;655;656 655 2261 AQSYDIQAWK 10 1 0 Phospho (STY) _AQS(ph)YDIQAWK_ AQS(1)YDIQAWK AQS(46.95)Y(-46.95)DIQAWK 0 0 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 649.2894 2 645.281735 1288.54892 75760.38 1.1912 0.00076864 -0.045493 -2.9356E-05 1.1457 0.00073928 645.281598459402 649.288797008265 91.305 1.104 91.305 90.796 91.9 -7.6294E-06 461 105 6 0 0 0 1.3059E-07 1 58751 125.28 82.948 2 1.5061 1.0191 0 25954000 10831000 15123000 406 1167 202 225 657 657 2261 AQTLPTSVVTITSESSPGK 19 1 0 Phospho (STY) _AQTLPTSVVTITSES(ph)SPGK_ AQTLPT(0.004)S(0.003)VVT(0.041)IT(0.146)S(0.206)ES(0.3)S(0.3)PGK AQT(-53.77)LPT(-18.55)S(-19.71)VVT(-8.69)IT(-3.11)S(-1.62)ES(0)S(0)PGK 0 0 1 0 D6W5C0;K9MS24;B2ZZ89;A0A087WUZ3;Q01082;B4DIF8 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 995.9951 2 991.987735 1981.96092 62115.37 0.4971 0.00049312 0.39185 0.00038871 0.88895 0.00088182 992.48964393129 995.995194979484 106.89 0.76832 106.89 106.51 107.28 0 443 64 9 0 0 0 6.6805E-08 2 62061 64.275 63.76 8 1.6033 1.9852 0 183450000 70866000 112590000 407 250 203 226 658;659 658 396;397 AQTLPTSVVTITSESSPGKR 20 1 1 Phospho (STY) _AQTLPTSVVTITSES(ph)SPGKR_ AQTLPTSVVTIT(0.028)S(0.119)ES(0.426)S(0.426)PGKR AQT(-57.87)LPT(-42.43)S(-42.93)VVT(-31.39)IT(-11.86)S(-5.53)ES(0)S(0)PGKR 0 0 1 1 D6W5C0;K9MS24;B2ZZ89;A0A087WUZ3;Q01082;B4DIF8 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 714.0302 3 713.694619 2138.06203 71136.64 1.5323 0.0010936 0.15428 0.00011011 1.6866 0.0012037 714.028899539171 719.702263244228 100.81 0.90311 100.81 100.45 101.35 0 396 68 8 0 0 0 5.2628E-09 2 57706 67.33 54.009 8 1.6481 1.9759 0 136120000 50317000 85798000 408 250 204 227 660;661 661 396;397 AQTLPTSVVTITSESSPGKR 20 1 1 Phospho (STY) _AQTLPTSVVTITSES(ph)SPGKR_ AQTLPTSVVT(0.005)IT(0.122)S(0.087)ES(0.461)S(0.325)PGKR AQT(-67.74)LPT(-40.29)S(-33.71)VVT(-20.04)IT(-5.77)S(-7.25)ES(1.52)S(-1.52)PGKR 0 0 1 1 D6W5C0;K9MS24;B2ZZ89;A0A087WUZ3;Q01082;B4DIF8 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 720.0372 3 713.694619 2138.06203 NaN NaN NaN -0.054097 -3.8609E-05 NaN NaN NaN NaN 99.874 1.4728 99.874 99.078 100.55 7.6294E-06 0 0 0 7.3458E-16 2 63921 87.49 63.928 8 NaN NaN 0 112690000 0 112690000 409 250 204 227 662;663 662 396;397 AQTPPGPSLSGSK 13 1 0 Phospho (STY) _AQT(ph)PPGPSLSGSK_ AQT(1)PPGPSLSGSK AQT(61.52)PPGPS(-61.52)LS(-66.25)GS(-70.96)K 0 0 1 0 A0A140VK53;Q9UQ35;O60382;I3L4D8 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 657.8137 2 653.805575 1305.5966 75332.59 0.60312 0.00039432 0.15611 0.00010207 0.75923 0.00049639 653.805703670666 657.812775872171 51.681 1.7441 51.681 50.818 52.562 0 867 138 10 0 0 0 4.935E-09 2 21170 104.55 86.11 4 1.3215 1.64 0 108440000 48194000 60243000 410 383 205 228 664;665 664 2699 AQTPPGPSLSGSK 13 1 0 Phospho (STY) _AQT(ph)PPGPSLSGSK_ AQT(1)PPGPSLSGSK AQT(54.22)PPGPS(-54.22)LS(-63.23)GS(-63.28)K 0 0 1 0 A0A140VK53;Q9UQ35;O60382;I3L4D8 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 657.8132 2 653.805575 1305.5966 74620.23 1.2102 0.00079124 -0.19105 -0.00012491 1.0192 0.00066633 653.805318487367 657.812434798032 42.669 1.0958 42.669 42.143 43.239 0 582 96 8 0 0 0 0.0012001 1 24940 83.511 68.251 4 1.0489 0.69993 0 111670000 52966000 58706000 411 383 205 228 666 666 2699 AQYEDIANR 9 0 1 Unmodified _AQYEDIANR_ 0 0 0 0 CON__P05787;P05787;Q969I0;Q7L4M3;F8VUG2 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 545.2637 2 540.259445 1078.50434 82742.84 0.64826 0.00035023 -0.051202 -2.7662E-05 0.59706 0.00032257 540.259372503706 545.263473603848 56.45 0.8711 56.45 56.015 56.886 3.8147E-06 310 72 6 0 0 0 0.00014952 2 24352 98.523 81.283 1 0.994 1.2194 0 22700000 11414000 11287000 + 412 754 206 229 667;668 667 AQYEDIANR 9 0 1 Unmodified _AQYEDIANR_ 0 0 0 0 CON__P05787;P05787;Q969I0;Q7L4M3;F8VUG2 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 545.2629 2 540.259445 1078.50434 NaN NaN NaN -0.52045 -0.00028118 NaN NaN NaN NaN 30.367 0.31914 30.367 30.233 30.552 -1.9073E-06 0 0 0 0.020921 1 15876 48.283 30.897 1 NaN NaN 0 3225700 0 3225700 + 413 754 206 229 669 669 AQYEDIANRSR 11 0 2 Phospho (STY) _AQYEDIANRS(ph)R_ AQYEDIANRS(1)R AQY(-85.72)EDIANRS(85.72)R 0 0 1 1 CON__P05787;P05787;Q969I0;Q7L4M3 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 468.2079 3 468.208545 1401.60381 86480.64 0.44298 0.00020741 -0.28831 -0.00013499 0.15467 7.2416E-05 468.208426710688 474.880553625469 27.441 0.37252 27.441 27.252 27.625 0 134 22 8 0 0 0 6.0987E-06 2 13442 93.823 93.823 2 1.6211 1.413 0 143240000 54545000 88692000 + 414 754 207 230 670;671 671 1266 AQYEDIANRSR 11 0 2 Phospho (STY) _AQYEDIANRS(ph)R_ AQYEDIANRS(1)R AQY(-70.09)EDIANRS(70.09)R 0 0 1 1 CON__P05787;P05787;Q969I0;Q7L4M3 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 701.8091 2 701.80918 1401.60381 71037.8 0.89589 0.00062874 -0.80721 -0.00056651 0.088673 6.2232E-05 701.808481207101 711.817180643835 27.444 0.53911 27.444 27.137 27.676 0 141 33 9 0 0 0 0.00023134 1 13401 87.914 80.459 2 1.4917 1.2989 0 116430000 44217000 72215000 + 415 754 207 230 672 672 1266 AQYEDIAQK 9 1 0 Unmodified _AQYEDIAQK_ 0 0 0 0 H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;H6VRG2 H6VRG3;H6VRG2 H6VRG2 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 533.2646 2 533.264196 1064.51384 NaN NaN NaN 0.37796 0.00020155 NaN NaN NaN NaN 54.234 1.2687 54.234 53.65 54.919 0 0 0 0 0.013884 2 23206 58.981 40.25 1 NaN NaN 0 4916300 4916300 0 + 416 876;877 208 231 673;674 674 ARPAPSRDPSPPR 13 0 3 Phospho (STY) _ARPAPSRDPS(ph)PPR_ ARPAPS(0.127)RDPS(0.873)PPR ARPAPS(-8.37)RDPS(8.37)PPR 0 0 1 2 Q5C9Z4 Q5C9Z4 Q5C9Z4 NOM1 Nucleolar MIF4G domain-containing protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 495.244 3 495.243701 1482.70927 84844.45 0.4802 0.00023782 0.027787 1.3761E-05 0.50799 0.00025158 495.243721240519 505.252039888779 17.415 0.55342 17.415 17.124 17.678 0 135 20 12 0 0 0 0.0019256 1 4534 44.567 27.165 2 0.74671 0.85861 0 94661000 55399000 39262000 417 1094 209 232 675 675 2063 ARPFPDGLAEDIDK 14 1 1 Unmodified _ARPFPDGLAEDIDK_ 0 0 0 1 P13639;Q8TA90;B4DPU3;M0R0I6;Q6W6M8 P13639 P13639 EEF2 Elongation factor 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 521.2711 3 515.263217 1542.76782 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.9 1 116.9 116.4 117.4 0 0 0 0 0.033938 1 69951 28.956 14.799 1 418 964 210 233 676 676 ARPFPDGLAEDIDK 14 1 1 Unmodified _ARPFPDGLAEDIDK_ 0 0 0 1 P13639;Q8TA90;B4DPU3;M0R0I6;Q6W6M8 P13639 P13639 EEF2 Elongation factor 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 781.4035 2 772.391187 1542.76782 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.56 1 117.56 117.06 118.06 0 0 0 0 0.0072636 1 70434 47.039 22.695 1 419 964 210 233 677 677 ARPFPDGLAEDIDK 14 1 1 Unmodified _ARPFPDGLAEDIDK_ 0 0 0 1 P13639;Q8TA90;B4DPU3;M0R0I6;Q6W6M8 P13639 P13639 EEF2 Elongation factor 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 521.2711 3 515.263217 1542.76782 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.66 1 117.66 117.16 118.16 0 0 0 0 0.00071811 1 70506 48.823 33.283 1 420 964 210 233 678 678 ARPSLTVTPR 10 0 2 2 Phospho (STY) _ARPS(ph)LTVT(ph)PR_ ARPS(0.894)LT(0.412)VT(0.694)PR ARPS(7.42)LT(-2.84)VT(2.84)PR 0 0 2 1 A0PJ70;A8K9K0;Q8TF76 A0PJ70 A0PJ70 GSG2 Serine/threonine-protein kinase haspin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 629.2916 2 629.291253 1256.56795 75940.11 0.71338 0.00044893 0.78166 0.00049189 1.495 0.00094082 629.291578608307 639.299003011128 61.661 0.66566 61.661 61.413 62.078 0 96 43 4 0 0 0 0.0054188 1 28437 49.632 31.495 3 0.93526 1.139 0 19959000 9635300 10324000 421 400 211 234 679 679 682;2713 ARPSQFPEQSSSAQQNGSVSDISPVQAAK 29 1 1 Phospho (STY) _ARPSQFPEQSSSAQQNGSVSDIS(ph)PVQAAK_ ARPSQFPEQSSSAQQNGS(0.004)VS(0.015)DIS(0.981)PVQAAK ARPS(-96.48)QFPEQS(-76.81)S(-77.35)S(-71.32)AQQNGS(-24.06)VS(-18.17)DIS(18.17)PVQAAK 0 0 1 1 B4DM85;O00139 B4DM85 B4DM85 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1034.4856 3 1027.81395 3080.42004 59161.57 0.15502 0.00015933 -3.3429 -0.0034358 -3.1878 -0.0032765 1028.47884163714 1034.48623849934 83.778 1.4222 83.778 83.075 84.497 -7.6294E-06 916 128 11 0 0 0 3.5192E-49 6 45246 109.25 100.46 7 0.62022 0.7409 0 103140000 57274000 45870000 422 640 212 235 680;681;682;683;684;685 685 1057 ARQEELYSELQAR 13 0 2 Unmodified _ARQEELYSELQAR_ 0 0 0 1 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 538.6129 3 531.605754 1591.79543 84860 1.1667 0.00062023 -0.025825 -1.3729E-05 1.1409 0.0006065 531.605771187765 538.277943851283 101.29 0.39512 101.29 101.07 101.46 7.6294E-06 118 32 5 0 0 0 0.01068 1 58169 57.159 36.777 1 1.7292 2.1309 0 28849000 11435000 17413000 423 1070 213 236 686 686 ARSDPLFSAQR 11 0 2 Phospho (STY) _ARS(ph)DPLFSAQR_ ARS(1)DPLFSAQR ARS(34.14)DPLFS(-34.14)AQR 0 0 1 1 F5H8F7;B4DPT1;A8K6T5;Q9UBL3 F5H8F7 F5H8F7 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 674.3195 2 664.311358 1326.60816 76030.8 0.86656 0.00057566 0.15505 0.000103 1.0216 0.00067866 664.311158193477 674.319973434722 77.473 1.1261 77.473 77.012 78.138 0 280 100 4 0 0 0 0.0043278 1 40357 66.393 57.071 2 0.46973 0.58165 0 33582000 21934000 11648000 424 483 214 237 687 687 835 ARVEELDRK 9 1 2 Unmodified _ARVEELDRK_ 0 0 0 2 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 381.8866 3 372.543767 1114.60947 96924.03 -0.05134 -1.9126E-05 -0.27122 -0.00010104 -0.32256 -0.00012017 372.543664251574 381.887167508829 82.761 0.81909 82.761 82.464 83.283 0 220 74 4 0 0 0 9.9958E-06 2 44250 117.02 47.747 1 0.84708 0.9914 0 113430000 60373000 53055000 425 514 215 238 688;689 688 ARVGGSDEEASGIPSR 16 0 2 Phospho (STY) _ARVGGS(ph)DEEASGIPSR_ ARVGGS(1)DEEASGIPSR ARVGGS(44.71)DEEAS(-44.71)GIPS(-60.07)R 0 0 1 1 A8MV53;A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;H7C446 A8MV53;H7C446 H7C446 PPAN;PPAN-P2RY11 Suppressor of SWI4 1 homolog ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 556.5843 3 556.58434 1666.73119 NaN NaN NaN -0.46639 -0.00025959 NaN NaN NaN NaN 59.136 0.54087 59.136 58.943 59.484 0 0 0 0 6.4569E-07 1 26407 61.087 37.058 3 NaN NaN 0 5146100 5146100 0 426 303;884 216 239 690 690 485 ARVGGSDEEASGIPSR 16 0 2 Phospho (STY) _ARVGGS(ph)DEEASGIPSR_ ARVGGS(1)DEEASGIPSR ARVGGS(78.46)DEEAS(-78.46)GIPS(-106.82)R 0 0 1 1 A8MV53;A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;H7C446 A8MV53;H7C446 H7C446 PPAN;PPAN-P2RY11 Suppressor of SWI4 1 homolog MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 556.9191 3 556.58434 1666.73119 79752.45 0.86094 0.00047919 -0.33461 -0.00018624 0.52633 0.00029295 556.58416059198 563.256408643659 33.883 1.0708 33.883 33.487 34.558 0 578 84 10 0 0 0 2.2695E-22 1 18477 112.14 98.114 3 1.0866 0.94842 0 188860000 87475000 101390000 427 303;884 216 239 691 691 485 ARVSGDDFSVPSK 13 1 1 Phospho (STY) _ARVS(ph)GDDFSVPSK_ ARVS(0.985)GDDFS(0.015)VPSK ARVS(18.22)GDDFS(-18.22)VPS(-42.09)K 0 0 1 1 B4DZG2;A0A024R8C1;Q15361 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 723.3296 2 722.827038 1443.63952 71195.01 1.1263 0.0008141 0.78995 0.000571 1.9162 0.0013851 722.827313660903 731.838635010083 56.253 1.7204 56.253 55.092 56.812 -3.8147E-06 742 144 9 0 0 0 0.0044601 1 34231 49.216 49.216 3 1.8717 1.4427 0 41880000 17466000 24414000 428 150 217 240 692 692 223 ASAGAEQTPGPLSQSPGLVK 20 1 0 Phospho (STY) _ASAGAEQTPGPLS(ph)QSPGLVK_ ASAGAEQT(0.001)PGPLS(0.499)QS(0.499)PGLVK AS(-34.25)AGAEQT(-25.56)PGPLS(0)QS(0)PGLVK 0 0 1 0 B2RWP5;Q96L73;Q9H6H8;Q658U6;Q9H6B5;A0A1D8GZ55;A0A1D8GZ56 B2RWP5 B2RWP5 NSD1;DKFZp666C163 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 987.9819 2 987.980244 1973.94594 NaN NaN NaN 0.62954 0.00062197 NaN NaN NaN NaN 89.726 0.3396 89.726 89.651 89.991 0 0 0 0 0.0011861 1 49195 40.725 22.1 4 NaN NaN 0 7379700 7379700 0 429 565 218 241 693 693 932;933;934 ASAGAEQTPGPLSQSPGLVK 20 1 0 2 Phospho (STY) _AS(ph)AGAEQTPGPLS(ph)QSPGLVK_ AS(0.997)AGAEQT(0.003)PGPLS(0.6)QS(0.4)PGLVK AS(26.12)AGAEQT(-26.12)PGPLS(1.77)QS(-1.77)PGLVK 0 0 2 0 B2RWP5;Q96L73;Q9H6H8;Q658U6;Q9H6B5;A0A1D8GZ55;A0A1D8GZ56 B2RWP5 B2RWP5 NSD1;DKFZp666C163 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1027.962 2 1027.96341 2053.91227 NaN NaN NaN -0.059933 -6.1609E-05 NaN NaN NaN NaN 97.441 0.50523 97.441 97.192 97.697 0 0 0 0 8.5132E-06 2 55223 50.425 37.194 6 NaN NaN 0 10878000 10878000 0 430 565 218 242 694;695 695 932;933;934 ASAGHVAVSSPTPETGPLQR 20 0 1 2 Phospho (STY) _ASAGHVAVS(ph)SPT(ph)PETGPLQR_ AS(0.004)AGHVAVS(0.52)S(0.52)PT(0.952)PET(0.004)GPLQR AS(-21.72)AGHVAVS(0)S(0)PT(10.41)PET(-23.89)GPLQR 0 0 2 0 P42695;Q96FA6 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 708.3187 3 707.983714 2120.92931 72022.96 0.69837 0.00049444 -0.055777 -3.9489E-05 0.6426 0.00045495 707.983584280999 711.319831285423 73.098 1.1329 73.098 72.48 73.613 0 593 95 8 0 0 0 9.3087E-06 3 37349 48.867 39.077 10 0.65024 0.82143 0 133130000 81445000 51684000 431 991 219 243 696;697;698 697 1754;1755;2885 ASAGHVAVSSPTPETGPLQR 20 0 1 2 Phospho (STY) _ASAGHVAVSS(ph)PT(ph)PETGPLQR_ ASAGHVAVS(0.026)S(0.974)PT(0.998)PET(0.002)GPLQR AS(-80.63)AGHVAVS(-15.82)S(15.82)PT(26.21)PET(-26.21)GPLQR 0 0 2 0 P42695;Q96FA6 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1061.4708 2 1061.47193 2120.92931 59391.7 0.15816 0.00016789 0.12812 0.00013599 0.28628 0.00030388 1061.4716351281 1066.47622078463 73.044 1.074 73.044 72.465 73.539 0 591 90 9 0 0 0 8.9202E-29 4 37378 113.88 113.88 10 0.65747 0.83062 0 138740000 82733000 56012000 432 991 219 243 699;700;701;702 702 1754;1755;2885 ASAGHVAVSSPTPETGPLQR 20 0 1 2 Phospho (STY) _ASAGHVAVSS(ph)PT(ph)PETGPLQR_ AS(0.002)AGHVAVS(0.17)S(0.831)PT(0.983)PET(0.015)GPLQR AS(-27.24)AGHVAVS(-6.97)S(6.97)PT(18.77)PET(-18.77)GPLQR 0 0 2 0 P42695;Q96FA6 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1061.4719 2 1061.47193 2120.92931 58952.54 0.72808 0.00077283 0.14837 0.00015749 0.87645 0.00093032 1061.47161359887 1066.47625393247 71.956 1.061 71.956 71.459 72.52 0 782 98 12 0 0 0 1.8412E-05 2 45520 50.178 47.189 10 1.2484 0.82683 0 208130000 92136000 115990000 433 991 219 243 703;704 703 1754;1755;2885 ASAGHVAVSSPTPETGPLQR 20 0 1 Phospho (STY) _ASAGHVAVSS(ph)PTPETGPLQR_ AS(0.002)AGHVAVS(0.095)S(0.689)PT(0.213)PET(0.001)GPLQR AS(-25.01)AGHVAVS(-8.6)S(5.09)PT(-5.09)PET(-29.32)GPLQR 0 0 1 0 P42695;Q96FA6 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 684.6643 3 681.328271 2040.96298 73227.44 0.59684 0.00040664 -0.0050621 -3.4489E-06 0.59177 0.00040319 681.662534442149 684.664378551538 74.411 1.4721 74.411 73.754 75.226 0 1006 128 10 0 0 0 1.3869E-05 3 38204 49.036 49.036 5 0.93782 1.1876 0 530620000 269530000 261090000 434 991 219 244 705;706;707 706 1754;1755;2885 ASAGHVAVSSPTPETGPLQR 20 0 1 Phospho (STY) _ASAGHVAVSS(ph)PTPETGPLQR_ ASAGHVAVS(0.052)S(0.942)PT(0.005)PETGPLQR AS(-86.79)AGHVAVS(-12.56)S(12.56)PT(-22.57)PET(-36.67)GPLQR 0 0 1 0 P42695;Q96FA6 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1026.4933 2 1021.48877 2040.96298 60825.84 0.31209 0.0003188 0.21768 0.00022235 0.52977 0.00054115 1021.99035585186 1026.99466617446 74.394 1.182 74.394 73.802 74.984 -7.6294E-06 608 102 8 0 0 0 7.2E-29 4 38337 116.06 102.58 5 0.9169 1.1576 0 97400000 49882000 47518000 435 991 219 244 708;709;710;711 711 1754;1755;2885 ASAGHVAVSSPTPETGPLQR 20 0 1 3 Phospho (STY) _ASAGHVAVS(ph)S(ph)PT(ph)PETGPLQR_ ASAGHVAVS(1)S(0.997)PT(0.993)PET(0.009)GPLQR AS(-37.12)AGHVAVS(36.08)S(25.71)PT(21.82)PET(-21.82)GPLQR 0 0 3 0 P42695;Q96FA6 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1101.957 2 1101.4551 2200.89564 58695.67 0.52208 0.00057505 -0.13617 -0.00014998 0.38591 0.00042506 1101.95634846603 1106.45915880126 75.885 1.1899 75.885 75.29 76.48 0 748 102 10 0 0 0 4.9063E-10 3 39348 77.506 64.526 10 0.85097 1.0761 0 238560000 124110000 114440000 436 991 219 245 712;713;714 713 1754;1755;2885 ASAGHVAVSSPTPETGPLQR 20 0 1 3 Phospho (STY) _ASAGHVAVS(ph)S(ph)PT(ph)PETGPLQR_ AS(0.006)AGHVAVS(0.965)S(0.965)PT(0.83)PET(0.234)GPLQR AS(-25.84)AGHVAVS(13.71)S(13.71)PT(6.57)PET(-6.57)GPLQR 0 0 3 0 P42695;Q96FA6 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1106.9601 2 1101.4551 2200.89564 57682.59 0.71629 0.00078896 -0.24188 -0.00026642 0.47441 0.00052254 1101.95645986008 1106.45896151253 81.026 1.5295 81.026 80.347 81.877 0 1000 144 10 0 0 0 0.0004137 1 51522 40.844 35.529 10 2.0655 1.3574 0 307360000 103550000 203820000 437 991 219 245 715 715 1754;1755;2885 ASAVSELSPR 10 0 1 Phospho (STY) _ASAVSELS(ph)PR_ ASAVSELS(1)PR AS(-146.39)AVS(-61.19)ELS(61.19)PR 0 0 1 0 Q9Y2W1;Q7Z5U1;Q05D20;Q6P0P7;Q6PJV4 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 548.7559 2 548.755353 1095.49615 81006.27 0.45529 0.00024984 -0.10087 -5.5352E-05 0.35442 0.00019449 548.755498373023 553.759261781107 58.124 2.1289 58.124 57.081 59.21 0 1028 172 9 0 0 0 1.0401E-132 4 25567 227.48 209.66 3 1.2186 1.5429 0 487810000 218320000 269490000 438 1248 220 246 716;717;718;719 719 2564 ASAVSELSPR 10 0 1 Phospho (STY) _ASAVSELS(ph)PR_ ASAVSELS(1)PR AS(-96.84)AVS(-41.44)ELS(41.44)PR 0 0 1 0 Q9Y2W1;Q7Z5U1;Q05D20;Q6P0P7;Q6PJV4 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 548.7556 2 548.755353 1095.49615 81304.14 0.64965 0.0003565 0.076894 4.2196E-05 0.72654 0.00039869 548.755463141285 553.759506694435 48.514 1.639 48.514 47.887 49.526 0 947 153 10 0 0 0 2.7057E-06 4 28826 102.87 93.385 3 1.7907 1.1688 0 431930000 158800000 273130000 439 1248 220 246 720;721;722;723 721 2564 ASDPASPHIGR 11 0 1 Phospho (STY) _ASDPAS(ph)PHIGR_ ASDPAS(1)PHIGR AS(-53.59)DPAS(53.59)PHIGR 0 0 1 0 O95425 O95425 O95425 SVIL Supervillin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 599.2685 2 594.263877 1186.5132 81038.73 0.88465 0.00052572 0.055303 3.2865E-05 0.93995 0.00055858 594.264301123938 599.267994830153 26.95 0.68321 26.95 26.554 27.237 0 107 39 7 0 0 0 3.1087E-06 1 12968 99.498 91.011 2 14.184 10.237 0 27273000 1730600 25542000 440 948 221 247 724 724 1639 ASEAASPLPDSPGDK 15 1 0 Phospho (STY) _ASEAASPLPDS(ph)PGDK_ ASEAAS(0.006)PLPDS(0.994)PGDK AS(-69.03)EAAS(-22.47)PLPDS(22.47)PGDK 0 0 1 0 Q8NDL6;Q68CZ2 Q8NDL6 Q8NDL6 DKFZp434I2435;TNS3 Tensin-3 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 765.3363 2 761.327068 1520.63958 NaN NaN NaN 0.51325 0.00039075 NaN NaN NaN NaN 59.312 0.77275 59.312 58.855 59.628 0 0 0 0 4.0235E-05 1 26450 79.82 64.191 3 NaN NaN 0 5185000 0 5185000 441 1116 222 248 725 725 2113 ASEMASQKQYK 11 2 0 Oxidation (M),Phospho (STY) _ASEM(ox)AS(ph)QKQYK_ ASEM(1)ASQKQYK ASEMAS(0.972)QKQY(0.027)K ASEM(50.21)ASQKQYK AS(-48.23)EMAS(15.49)QKQY(-15.49)K 0 1 1 1 Q2TBD1;B0YJ47;O76041 Q2TBD1 Q2TBD1 NEBL Nebulette ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 691.807 2 683.789067 1365.56358 NaN NaN NaN 2.233 0.0015269 NaN NaN NaN NaN 76.5 0.2301 76.5 76.452 76.682 0 0 0 0 0.0066105 1 39689 50.207 21.222 3 NaN NaN 0 11586000 0 11586000 442 516 223 249 726 726 135 880 ASETSPFPPAK 11 1 0 Phospho (STY) _ASETS(ph)PFPPAK_ AS(0.002)ET(0.09)S(0.909)PFPPAK AS(-27.59)ET(-10.05)S(10.05)PFPPAK 0 0 1 0 E7ENF1;G5EA44;F5H7W8;Q96C57;B4DRA4 E7ENF1 E7ENF1 C12orf43 Uncharacterized protein C12orf43 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 610.2793 2 606.270836 1210.52712 NaN NaN NaN 0.029831 1.8086E-05 NaN NaN NaN NaN 62.123 1.0003 62.123 61.531 62.531 3.8147E-06 0 0 0 0.01238 1 28780 49.632 25.781 3 NaN NaN 0 5362900 0 5362900 443 788 224 250 727 727 1328 ASFDHSPDSLPLR 13 0 1 Phospho (STY) _ASFDHS(ph)PDSLPLR_ AS(0.005)FDHS(0.976)PDS(0.019)LPLR AS(-23.31)FDHS(17.06)PDS(-17.06)LPLR 0 0 1 0 Q8NB78 Q8NB78 Q8NB78 KDM1B Lysine-specific histone demethylase 1B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 766.3441 2 761.340313 1520.66607 71322.65 0.78479 0.00059749 0.14121 0.00010751 0.926 0.000705 761.340212740785 766.34469081881 92.421 0.63844 92.421 92.102 92.741 0 116 58 4 0 0 0 0.0056092 2 51439 50.284 39.454 3 0.60122 0.73903 0 29365000 17043000 12322000 444 1156 225 251 728;729 729 2229 ASGGSLQGHDAVLR 14 0 1 Unmodified _ASGGSLQGHDAVLR_ 0 0 0 0 Q8NEJ9;G3V4G1;H0YJ17 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 459.9088 3 456.572385 1366.69533 91122.1 0.31125 0.00014211 -0.29159 -0.00013313 0.019664 8.9782E-06 456.572240360434 460.24262718577 75.947 0.49001 75.947 75.756 76.246 0 128 44 4 0 0 0 0.001198 4 39255 52.5 44.968 1 0.80411 0.98904 0 25686000 13652000 12034000 445 1161 226 252 730;731;732;733 731 ASGNYATVISHNPETK 16 1 0 Unmodified _ASGNYATVISHNPETK_ 0 0 0 0 E9PKZ0;P62917;G3V1A1;B4DVG7 E9PKZ0 E9PKZ0 RPL8 60S ribosomal protein L8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 566.6204 3 563.612797 1687.81656 79866.13 0.75246 0.0004241 -0.21684 -0.00012221 0.53562 0.00030188 563.612522512828 566.283983885835 77.107 1.1976 77.107 76.762 77.96 0 574 106 8 0 0 0 0.00056154 3 40496 40.693 40.693 1 0.79509 0.98507 0 139230000 84761000 54466000 446 811 227 253 734;735;736 736 ASGNYATVISHNPETK 16 1 0 Unmodified _ASGNYATVISHNPETK_ 0 0 0 0 E9PKZ0;P62917;G3V1A1;B4DVG7 E9PKZ0 E9PKZ0 RPL8 60S ribosomal protein L8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 844.9165 2 844.915558 1687.81656 67254.9 0.74636 0.00063061 -0.20119 -0.00016999 0.54516 0.00046062 844.915311007141 848.922390270703 77.115 0.92198 77.115 76.814 77.736 0 277 79 6 0 0 0 1.342E-15 2 39953 132.97 124.01 1 0.7992 1.0141 0 38344000 22117000 16227000 447 811 227 253 737;738 738 ASGPPVSELITK 12 1 0 Unmodified _ASGPPVSELITK_ 0 0 0 0 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 603.8455 2 599.837528 1197.6605 78624.87 1.0231 0.00061372 0.37843 0.00022699 1.4016 0.00084071 599.837792084031 603.844766765354 93.961 1.0542 93.961 93.573 94.627 0 502 88 8 0 0 0 0.00044715 1 52368 89.266 62.151 1 0.98286 1.2156 0 311150000 159900000 151260000 448 410;967 228 254 739 739 ASGPPVSELITK 12 1 0 Unmodified _ASGPPVSELITK_ 0 0 0 0 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 599.8383 2 599.837528 1197.6605 79512.91 0.91661 0.00054982 0.03772 2.2626E-05 0.95433 0.00057244 599.837473768232 603.844586887803 85.675 1.7354 85.675 85.072 86.807 7.6294E-06 628 161 7 0 0 0 0.016301 1 55235 66.56 41.001 1 0.61406 0.40324 0 54177000 35713000 18464000 449 410;967 228 254 740 740 ASGPPVSELITK 12 1 0 Phospho (STY) _AS(ph)GPPVSELITK_ AS(1)GPPVSELITK AS(62.2)GPPVS(-62.2)ELIT(-92.44)K 0 0 1 0 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 643.8284 2 639.820693 1277.62683 75674.69 1.4083 0.00090104 -0.24887 -0.00015923 1.1594 0.0007418 639.820565463677 643.82756030671 99.673 1.7881 99.673 98.446 100.23 0 883 147 9 0 0 0 4.3295E-06 4 57012 96.734 86.21 3 0.79473 0.9809 0 786930000 436950000 349980000 450 410;967 228 255 741;742;743;744 744 702;703;1714;1715 ASGPPVSELITK 12 1 0 Phospho (STY) _ASGPPVS(ph)ELITK_ ASGPPVS(1)ELITK AS(-49.56)GPPVS(49.56)ELIT(-58.26)K 0 0 1 0 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 639.8218 2 639.820693 1277.62683 75986.19 1.8168 0.0011625 0.4397 0.00028133 2.2565 0.0014438 639.820839602863 643.827934749507 100.45 1.0407 100.45 100.22 101.26 -7.6294E-06 452 78 9 0 0 0 5.023E-42 2 57517 162.52 139.46 3 0.85113 1.0543 0 149600000 79930000 69671000 451 410;967 228 255 745;746 745 702;703;1714;1715 ASGPPVSELITK 12 1 0 Phospho (STY) _AS(ph)GPPVSELITK_ AS(1)GPPVSELITK AS(50.56)GPPVS(-50.56)ELIT(-72.9)K 0 0 1 0 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 643.8289 2 639.820693 1277.62683 76288.09 1.1108 0.00071069 0.1074 6.8716E-05 1.2182 0.00077941 639.820759884117 643.827724888129 103.51 1.347 103.51 102.87 104.22 0 874 130 9 0 0 0 0.0011384 3 66888 77.894 69.67 3 0.37431 0.24952 0 104920000 76088000 28828000 452 410;967 228 255 747;748;749 749 702;703;1714;1715 ASGPPVSELITK 12 1 0 Phospho (STY) _ASGPPVS(ph)ELITK_ ASGPPVS(0.953)ELIT(0.047)K AS(-41.4)GPPVS(13.05)ELIT(-13.05)K 0 0 1 0 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 643.8281 2 639.820693 1277.62683 75803.05 1.1575 0.0007406 -0.095762 -6.1271E-05 1.0617 0.00067932 639.820601119267 643.827650036003 105.12 1.6652 105.12 104.23 105.89 7.6294E-06 802 157 8 0 0 0 0.0062491 2 67837 63.894 47.691 3 0.4336 0.28767 0 77877000 52130000 25748000 453 410;967 228 255 750;751 751 702;703;1714;1715 ASGSGGGSAALGPSGFGPSGGSGTK 25 1 0 Phospho (STY) _ASGSGGGSAALGPSGFGPSGGS(ph)GTK_ ASGSGGGSAALGPSGFGPS(0.149)GGS(0.425)GT(0.425)K AS(-42.14)GS(-42.14)GGGS(-48.52)AALGPS(-31.39)GFGPS(-4.56)GGS(0)GT(0)K 0 0 1 0 X5CF57;A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;A0A0G2JHN8;A0A140T9I1;A0A140T9V2 X5CF57 X5CF57 BRD2 Bromodomain-containing protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1044.9592 2 1044.45512 2086.89569 59273 0.77517 0.00080963 -0.12635 -0.00013197 0.64882 0.00067767 1044.95663629679 1048.46176711654 76.146 0.94064 76.146 75.636 76.577 0 335 82 5 0 0 0 2.1113E-12 1 39125 58.516 48.459 7 0.47919 0.603 0 51925000 38298000 13626000 454 214 229 256 752 752 333;2660 ASIEHEALYLEADLEVVQTEK 21 1 0 Phospho (STY) _AS(ph)IEHEALYLEADLEVVQTEK_ AS(0.957)IEHEALY(0.043)LEADLEVVQTEK AS(13.44)IEHEALY(-13.44)LEADLEVVQT(-54.33)EK 0 0 1 0 P49454 P49454 P49454 CENPF Centromere protein F ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 823.395 3 823.059515 2466.15672 NaN NaN NaN -0.30262 -0.00024907 NaN NaN NaN NaN 133.42 0.14882 133.42 133.32 133.47 0 0 0 0 1.8956E-06 1 81238 55.051 46.864 3 NaN NaN 0 9513700 9513700 0 455 999 230 257 753 753 1807 ASIEHEALYLEADLEVVQTEK 21 1 0 Phospho (STY) _AS(ph)IEHEALYLEADLEVVQTEK_ AS(0.992)IEHEALY(0.008)LEADLEVVQTEK AS(20.78)IEHEALY(-20.78)LEADLEVVQT(-53.46)EK 0 0 1 0 P49454 P49454 P49454 CENPF Centromere protein F MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 825.7299 3 823.059515 2466.15672 NaN NaN NaN NaN NaN NaN NaN NaN NaN 133.41 1 133.41 132.91 133.91 0 0 0 0 0.00016639 1 81207 53.481 41.628 3 456 999 230 257 754 754 1807 ASLEAAIADAEQR 13 0 1 Phospho (STY) _AS(ph)LEAAIADAEQR_ AS(1)LEAAIADAEQR AS(103.85)LEAAIADAEQR 0 0 1 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 717.8312 2 712.824496 1423.63444 72440.21 1.6424 0.0011708 0.13626 9.7126E-05 1.7787 0.0012679 712.82457760516 717.828693855843 100 1.2651 100 99.298 100.56 0 549 101 7 0 0 0 7.1849E-10 4 57283 103.85 82.753 1 0.4199 0.53027 0 110820000 79290000 31530000 + 457 754 231 258 755;756;757;758 758 1267 ASLEAAIADAEQR 13 0 1 Phospho (STY) _AS(ph)LEAAIADAEQR_ AS(1)LEAAIADAEQR AS(76.26)LEAAIADAEQR 0 0 1 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 717.8295 2 712.824496 1423.63444 72272.93 1.113 0.00079341 -0.28331 -0.00020195 0.82974 0.00059146 712.824590729273 717.82803589929 106.16 0.89429 106.16 105.76 106.65 0 398 85 6 0 0 0 0.0005609 3 68236 76.262 76.262 1 0.77336 0.57928 0 21229000 11468000 9761000 + 458 754 231 258 759;760;761 761 1267 ASLEAAIADAEQR 13 0 1 Unmodified _ASLEAAIADAEQR_ 0 0 0 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 672.8418 2 672.84133 1343.66811 NaN NaN NaN -0.017072 -1.1487E-05 NaN NaN NaN NaN 94.95 0.099968 94.95 94.915 95.015 0 0 0 0 0.019123 1 61144 39.58 21.684 1 NaN NaN 0 1407900 1407900 0 + 459 754 231 259 762 762 ASLVSEEEEDEEEDK 15 1 0 Phospho (STY) _ASLVS(ph)EEEEDEEEDK_ ASLVS(1)EEEEDEEEDK AS(-54.81)LVS(54.81)EEEEDEEEDK 0 0 1 0 A8K8X5;A0A024RA51;Q96GN5;C9JFL7;C9J8L0;C9IZR6 A8K8X5 A8K8X5 CDCA7L Cell division cycle-associated 7-like protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 909.3474 2 909.346049 1816.67754 64491.7 0.68408 0.00062206 0.0010075 9.1619E-07 0.68508 0.00062298 909.345911808127 913.353252145059 70.289 1.2137 70.289 69.773 70.987 0 565 117 7 0 0 0 3.5254E-34 4 35317 145.52 133.88 2 0.47755 0.59719 0 64285000 43035000 21250000 460 179 232 260 763;764;765;766 765 278 ASLVSEEEEDEEEDK 15 1 0 Phospho (STY) _ASLVS(ph)EEEEDEEEDK_ ASLVS(1)EEEEDEEEDK AS(-55.76)LVS(55.76)EEEEDEEEDK 0 0 1 0 A8K8X5;A0A024RA51;Q96GN5;C9JFL7;C9J8L0;C9IZR6 A8K8X5 A8K8X5 CDCA7L Cell division cycle-associated 7-like protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 909.3474 2 909.346049 1816.67754 63329.63 1.0291 0.00093577 0.21044 0.00019136 1.2395 0.0011271 909.346135671825 913.353141897033 71.789 1.1335 71.789 71.138 72.271 0 805 105 10 0 0 0 3.0606E-28 3 45600 136.39 128.32 2 0.91461 0.61146 0 142740000 76012000 66730000 461 179 232 260 767;768;769 768 278 ASMDVENPDYSEEILK 16 1 0 Oxidation (M),Phospho (STY) _AS(ph)M(ox)DVENPDYSEEILK_ ASM(1)DVENPDYSEEILK AS(1)MDVENPDYSEEILK ASM(45.33)DVENPDYSEEILK AS(41.32)MDVENPDY(-41.32)S(-43.89)EEILK 0 1 1 0 B4DSL9;B3KQ21;Q9NYH9;B7Z9G4;B3KX32 B4DSL9 B4DSL9 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 968.399 2 968.400104 1934.78566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.274 1 95.274 94.774 95.774 7.6294E-06 0 0 0 0.0011572 1 53504 45.33 35.134 3 462 591 233 261 770 770 148 974 ASMSEFLESEDGEVEQQR 18 0 1 Oxidation (M),Phospho (STY) _ASM(ox)SEFLES(ph)EDGEVEQQR_ ASM(1)SEFLESEDGEVEQQR ASMSEFLES(1)EDGEVEQQR ASM(81.66)SEFLESEDGEVEQQR AS(-38.71)MS(-38.71)EFLES(38.71)EDGEVEQQR 0 1 1 0 J3QQW9;A8K1U9;Q15022 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1084.4302 2 1083.93029 2165.84602 58728.77 0.34187 0.00037056 -0.30748 -0.00033328 0.034393 3.728E-05 1084.4315336406 1088.93450286568 78.397 1.1528 78.397 77.911 79.063 7.6294E-06 617 102 10 0 0 0 5.9987E-09 3 41390 81.656 76.272 3 1.0757 1.3585 0 115940000 56142000 59798000 463 446 234 262 771;772;773 773 117 774;775;776 ASMSEFLESEDGEVEQQR 18 0 1 Oxidation (M),Phospho (STY) _AS(ph)M(ox)SEFLESEDGEVEQQR_ ASM(1)SEFLESEDGEVEQQR AS(0.873)MS(0.127)EFLESEDGEVEQQR ASM(88.99)SEFLESEDGEVEQQR AS(8.38)MS(-8.38)EFLES(-55.8)EDGEVEQQR 0 1 1 0 J3QQW9;A8K1U9;Q15022 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1088.9346 2 1083.93029 2165.84602 NaN NaN NaN -0.57278 -0.00062086 NaN NaN NaN NaN 81.026 0.548 81.026 80.715 81.263 7.6294E-06 0 0 0 2.1253E-11 1 43196 88.992 74.977 3 NaN NaN 0 12909000 0 12909000 464 446 234 262 774 774 117 774;775;776 ASMSEFLESEDGEVEQQR 18 0 1 Oxidation (M),Phospho (STY) _AS(ph)M(ox)SEFLESEDGEVEQQR_ ASM(1)SEFLESEDGEVEQQR AS(0.5)MS(0.5)EFLESEDGEVEQQR ASM(83.11)SEFLESEDGEVEQQR AS(0)MS(0)EFLES(-63.5)EDGEVEQQR 0 1 1 0 J3QQW9;A8K1U9;Q15022 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1083.9297 2 1083.93029 2165.84602 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.798 1 80.798 80.298 81.298 0 0 0 0 2.5776E-07 1 42865 83.106 61.872 3 465 446 234 262 775 775 117 774;775;776 ASMSEFLESEDGEVEQQR 18 0 1 Oxidation (M),Phospho (STY) _AS(ph)M(ox)SEFLESEDGEVEQQR_ ASM(1)SEFLESEDGEVEQQR AS(0.5)MS(0.5)EFLESEDGEVEQQR ASM(73.98)SEFLESEDGEVEQQR AS(0)MS(0)EFLES(-47.36)EDGEVEQQR 0 1 1 0 J3QQW9;A8K1U9;Q15022 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1083.9312 2 1083.93029 2165.84602 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.828 1 80.828 80.328 81.328 0 0 0 0 9.9313E-09 1 42884 73.983 61.216 3 466 446 234 262 776 776 117 774;775;776 ASMSEFLESEDGEVEQQR 18 0 1 Oxidation (M),Phospho (STY) _ASM(ox)SEFLES(ph)EDGEVEQQR_ ASM(1)SEFLESEDGEVEQQR ASMSEFLES(0.999)EDGEVEQQR ASM(75.55)SEFLESEDGEVEQQR AS(-34.14)MS(-34.59)EFLES(34.14)EDGEVEQQR 0 1 1 0 J3QQW9;A8K1U9;Q15022 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1084.4329 2 1083.93029 2165.84602 58964.18 0.71774 0.00077798 -0.14121 -0.00015306 0.57653 0.00062492 1084.43220376771 1088.93430199355 81.505 0.74815 81.505 81.149 81.897 0 480 69 9 0 0 0 9.45E-08 3 52332 75.548 64.504 3 1.5173 1.0174 0 113010000 44401000 68610000 467 446 234 262 777;778;779 778 117 774;775;776 ASPAGTAGGPGAGAAAGGTGPLAAR 25 0 1 Phospho (STY) _AS(ph)PAGTAGGPGAGAAAGGTGPLAAR_ AS(0.5)PAGT(0.5)AGGPGAGAAAGGTGPLAAR AS(0)PAGT(0)AGGPGAGAAAGGT(-45.15)GPLAAR 0 0 1 0 Q12962 Q12962 Q12962 TAF10 Transcription initiation factor TFIID subunit 10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1027.4886 2 1022.48402 2042.95348 61990.01 0.20783 0.0002125 0.23802 0.00024337 0.44585 0.00045587 1022.9857829287 1027.48861158461 71.549 0.72699 71.549 71.217 71.944 0 277 65 6 0 0 0 1.5256E-08 1 35790 46.569 46.569 3 0.38343 0.47915 0 39296000 25212000 14084000 468 1046 235 263 780 780 1954;2918 ASPAGTAGGPGAGAAAGGTGPLAAR 25 0 1 Phospho (STY) _AS(ph)PAGTAGGPGAGAAAGGTGPLAAR_ AS(0.917)PAGT(0.083)AGGPGAGAAAGGTGPLAAR AS(10.43)PAGT(-10.43)AGGPGAGAAAGGT(-40.6)GPLAAR 0 0 1 0 Q12962 Q12962 Q12962 TAF10 Transcription initiation factor TFIID subunit 10 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1022.4846 2 1022.48402 2042.95348 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.221 1 71.221 70.721 71.721 0 0 0 0 3.1241E-05 1 35732 45.363 32.383 3 469 1046 235 263 781 781 1954;2918 ASPAGTAGGPGAGAAAGGTGPLAAR 25 0 1 Phospho (STY) _AS(ph)PAGTAGGPGAGAAAGGTGPLAAR_ AS(0.973)PAGT(0.027)AGGPGAGAAAGGTGPLAAR AS(15.58)PAGT(-15.58)AGGPGAGAAAGGT(-42.74)GPLAAR 0 0 1 0 Q12962 Q12962 Q12962 TAF10 Transcription initiation factor TFIID subunit 10 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1027.4872 2 1022.48402 2042.95348 NaN NaN NaN -1.3449 -0.0013751 NaN NaN NaN NaN 72.463 0.89331 72.463 72.108 73.001 0 0 0 0 0.00016745 1 45999 43.791 28.915 3 NaN NaN 0 10073000 0 10073000 470 1046 235 263 782 782 1954;2918 ASPAVALPK 9 1 0 Phospho (STY) _AS(ph)PAVALPK_ AS(1)PAVALPK AS(61.59)PAVALPK 0 0 1 0 B5BUA4;Q5FBB7;A0A024R2J4 B5BUA4 B5BUA4 SGOL1 Shugoshin-like 1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 471.2508 2 467.243893 932.473233 NaN NaN NaN -0.33781 -0.00015784 NaN NaN NaN NaN 73.333 1.3318 73.333 72.673 74.005 0 0 0 0 0.0072386 1 37241 61.593 34.705 1 NaN NaN 0 32423000 0 32423000 471 691 236 264 783 783 1138 ASPAVALPK 9 1 0 Phospho (STY) _AS(ph)PAVALPK_ AS(1)PAVALPK AS(48.03)PAVALPK 0 0 1 0 B5BUA4;Q5FBB7;A0A024R2J4 B5BUA4 B5BUA4 SGOL1 Shugoshin-like 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 467.2444 2 467.243893 932.473233 88498.62 0.57202 0.00026727 0.16876 7.8852E-05 0.74078 0.00034613 467.243836246746 471.250869483663 70.382 1.7472 70.382 69.402 71.149 0 671 151 7 0 0 0 0.017859 1 44518 48.028 31.31 1 1.2338 0.82626 0 27478000 12680000 14798000 472 691 236 264 784 784 1138 ASPITNDGEDEFVPSDGLDK 20 1 0 Phospho (STY) _AS(ph)PITNDGEDEFVPSDGLDK_ AS(1)PITNDGEDEFVPSDGLDK AS(35.28)PIT(-35.28)NDGEDEFVPS(-164.48)DGLDK 0 0 1 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1093.9647 2 1093.46228 2184.91 57144.16 1.0292 0.0011254 0.066866 7.3116E-05 1.0961 0.0011985 1093.96331861651 1097.97061288123 102.43 1.2771 102.43 101.76 103.04 0 634 98 9 0 0 0 2.1067E-99 2 59003 182.34 161.95 3 0.50074 0.62042 0 135990000 86275000 49716000 473 1032 237 265 785;786 785 1860;1861 ASPITNDGEDEFVPSDGLDK 20 1 0 Phospho (STY) _ASPITNDGEDEFVPS(ph)DGLDK_ ASPITNDGEDEFVPS(0.999)DGLDK AS(-39.67)PIT(-33.64)NDGEDEFVPS(33.64)DGLDK 0 0 1 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1093.4631 2 1093.46228 2184.91 56460.77 0.39254 0.00042923 -0.54853 -0.0005998 -0.15599 -0.00017057 1093.96351498017 1097.97018337849 103.88 0.6476 103.88 103.76 104.41 0 219 46 7 0 0 0 1.9081E-05 1 60286 50.938 50.938 3 0.64538 0.81682 0 43950000 29251000 14699000 474 1032 237 265 787 787 1860;1861 ASPPPQGPLPGPPGALHR 18 0 1 Phospho (STY) _AS(ph)PPPQGPLPGPPGALHR_ AS(1)PPPQGPLPGPPGALHR AS(47.39)PPPQGPLPGPPGALHR 0 0 1 0 A0A087WXV6;A0A024QZ09;Q96G74 A0A087WXV6 A0A087WXV6 OTUD5 OTU domain-containing protein 5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 612.6463 3 609.308482 1824.90362 80426.59 0.7418 0.00045198 0.48269 0.00029411 1.2245 0.00074609 609.642983206506 612.979047232637 89.505 0.60034 89.505 89.16 89.761 0 120 51 4 0 0 0 5.8867E-05 1 48934 47.392 39.205 1 0.97852 1.2034 0 26383000 11032000 15351000 475 4 238 266 788 788 1 ASPPSGLWSPAYASH 15 0 0 Phospho (STY) _AS(ph)PPSGLWSPAYASH_ AS(1)PPSGLWSPAYASH AS(37.79)PPS(-37.79)GLWS(-77.53)PAY(-107.41)AS(-105.11)H 0 0 1 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 ISO-MSMS -1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 804.35 2 804.348138 1606.68172 NaN NaN NaN -0.00082344 -6.6234E-07 NaN NaN NaN NaN 105.49 1.2499 105.49 104.72 105.97 0 0 0 0 4.8421E-36 1 61339 127.02 109.22 5 476 1164 239 267 789 789 2248 ASPQGGQIAIAMR 13 0 1 Acetyl (Protein N-term),Oxidation (M),Phospho (STY) _(ac)AS(ph)PQGGQIAIAM(ox)R_ ASPQGGQIAIAM(1)R AS(1)PQGGQIAIAMR ASPQGGQIAIAM(84.75)R AS(84.75)PQGGQIAIAMR 1 1 1 0 Q9BSM1 Q9BSM1 Q9BSM1 PCGF1 Polycomb group RING finger protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 724.3362 2 719.331434 1436.64831 71269.66 0.81789 0.00058833 0.37148 0.00026722 1.1894 0.00085555 719.331887638015 724.335975683125 80.166 0.91119 80.166 79.643 80.555 -7.6294E-06 252 83 5 0 0 0 3.0615E-05 2 42235 84.753 71.35 1 0.61213 0.75237 0 29922000 16625000 13297000 477 1194 240 268 790;791 791 332 2365 ASPQSEFMPSK 11 1 0 Oxidation (M),Phospho (STY) _AS(ph)PQSEFM(ox)PSK_ ASPQSEFM(1)PSK AS(1)PQSEFMPSK ASPQSEFM(81.71)PSK AS(42.69)PQS(-42.69)EFMPS(-70.86)K 0 1 1 0 H7C1K5;B4DSL6;A8K5D9;A0A024RA49;Q9NQW6 H7C1K5 H7C1K5 ANLN Actin-binding protein anillin ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 656.7728 2 652.765061 1303.51557 NaN NaN NaN 0.42681 0.00027861 NaN NaN NaN NaN 52.547 1.3201 52.547 51.962 53.282 0 0 0 0 0.0002466 1 21539 81.709 59.472 3 NaN NaN 0 14301000 0 14301000 478 178 241 269 792 792 40 277 ASPSFEER 8 0 1 Phospho (STY) _AS(ph)PSFEER_ AS(0.999)PS(0.001)FEER AS(32.91)PS(-32.91)FEER 0 0 1 0 B3GQE6;Q53G15 B3GQE6 B3GQE6 DDX27 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 506.7048 2 501.700047 1001.38554 85213.75 0.53512 0.00026847 -0.080666 -4.047E-05 0.45446 0.000228 501.699930724423 506.704083871135 43.905 1.802 43.905 43.079 44.881 0 644 130 8 0 0 0 0.0077998 2 16225 68.557 42.936 2 0.58501 0.73562 0 43181000 27156000 16025000 479 566 242 270 793;794 794 944 ASPSLERPEK 10 1 1 Acetyl (Protein N-term),Phospho (STY) _(ac)AS(ph)PSLERPEK_ AS(1)PSLERPEK AS(48.35)PS(-48.35)LERPEK 1 0 1 1 B4DMS5;Q13601 B4DMS5 B4DMS5 KRR1 KRR1 small subunit processome component homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 618.2875 2 618.287018 1234.55948 76949.61 0.38685 0.00023918 0.15657 9.6803E-05 0.54341 0.00033598 618.287390501565 627.298214914605 52.817 2.4233 52.817 51.717 54.14 3.8147E-06 1258 192 11 0 0 0 3.0209E-22 5 21929 151.79 124.31 2 0.90183 1.1045 0 699090000 369370000 329720000 480 643 243 271 795;796;797;798;799 797 1061 ASPSLERPEK 10 1 1 Acetyl (Protein N-term),Phospho (STY) _(ac)AS(ph)PSLERPEK_ AS(0.992)PS(0.008)LERPEK AS(20.68)PS(-20.68)LERPEK 1 0 1 1 B4DMS5;Q13601 B4DMS5 B4DMS5 KRR1 KRR1 small subunit processome component homolog MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 627.2987 2 618.287018 1234.55948 76397.87 0.95237 0.00058884 -0.45027 -0.00027839 0.5021 0.00031044 618.287111790229 627.297881162316 42.796 2.2427 42.796 42.175 44.417 0 1185 202 11 0 0 0 0.0015254 5 25414 68.676 57.75 2 1.0638 0.8249 0 1381200000 676830000 704380000 481 643 243 271 800;801;802;803;804 802 1061 ASPVTSPAAAFPTASPANK 19 1 0 Phospho (STY) _AS(ph)PVTSPAAAFPTASPANK_ AS(0.962)PVT(0.037)SPAAAFPTASPANK AS(14.11)PVT(-14.11)S(-35.04)PAAAFPT(-50.41)AS(-50.41)PANK 0 0 1 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;H0YHQ7 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 932.9471 2 932.945673 1863.87679 64275.84 1.2564 0.0011722 -0.3923 -0.00036599 0.86415 0.00080621 933.446587304335 936.952637812811 92.992 0.68729 92.992 92.59 93.277 0 298 57 7 0 0 0 3.0591E-13 2 51548 82.59 65.905 5 0.93365 1.1846 0 38139000 20987000 17151000 482 829 244 272 805;806 806 1426;1427;1428;2833;2834 ASPVTSPAAAFPTASPANK 19 1 0 Phospho (STY) _ASPVTS(ph)PAAAFPTASPANK_ ASPVT(0.204)S(0.795)PAAAFPTASPANK AS(-35.09)PVT(-5.9)S(5.9)PAAAFPT(-46.36)AS(-57.33)PANK 0 0 1 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;H0YHQ7 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 936.9548 2 932.945673 1863.87679 64530.25 1.0047 0.00093737 0.46071 0.00042982 1.4655 0.0013672 932.945780984718 937.454945984189 94.123 0.56947 94.123 93.848 94.417 0 207 49 6 0 0 0 2.7779E-13 1 52763 83.404 70.204 5 0.9666 1.2253 0 34216000 14887000 19329000 483 829 244 272 807 807 1426;1427;1428;2833;2834 ASPVTSPAAAFPTASPANK 19 1 0 2 Phospho (STY) _ASPVTS(ph)PAAAFPT(ph)ASPANK_ AS(0.017)PVT(0.461)S(0.522)PAAAFPT(0.621)AS(0.379)PANK AS(-15.24)PVT(-0.56)S(0.56)PAAAFPT(2.18)AS(-2.18)PANK 0 0 2 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;H0YHQ7 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 973.4301 2 972.928839 1943.84312 62027.05 1.0064 0.00097917 -0.34798 -0.00033856 0.65843 0.00064061 973.42999082799 976.93598876711 97.353 0.71114 97.353 96.997 97.708 0 228 61 5 0 0 0 1.882E-05 2 54897 52.045 43.365 10 0.65122 0.82257 0 31026000 19381000 11645000 484 829 244 273 808;809 808 1426;1427;1428;2833;2834 ASPVTSPAAAFPTASPANK 19 1 0 2 Phospho (STY) _AS(ph)PVTS(ph)PAAAFPTASPANK_ AS(1)PVT(0.017)S(0.983)PAAAFPTASPANK AS(36.44)PVT(-17.56)S(17.56)PAAAFPT(-76.6)AS(-87.79)PANK 0 0 2 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;H0YHQ7 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 976.9384 2 972.928839 1943.84312 NaN NaN NaN 0.29556 0.00028755 NaN NaN NaN NaN 95.06 0.95462 95.06 94.588 95.543 0 0 0 0 5.8228E-37 1 53603 122.44 100.98 10 NaN NaN 0 76932000 0 76932000 485 829 244 273 810 810 1426;1427;1428;2833;2834 ASPVTSPAAAFPTASPANK 19 1 0 2 Phospho (STY) _AS(ph)PVTS(ph)PAAAFPTASPANK_ AS(0.995)PVT(0.22)S(0.785)PAAAFPTASPANK AS(21.76)PVT(-5.6)S(5.6)PAAAFPT(-45.87)AS(-56.07)PANK 0 0 2 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;H0YHQ7 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 976.9372 2 972.928839 1943.84312 NaN NaN NaN 2.1226 0.0020651 NaN NaN NaN NaN 105.09 1.5084 105.09 104.41 105.92 -7.6294E-06 0 0 0 6.9388E-11 1 67733 71.073 55.534 10 NaN NaN 0 88607000 0 88607000 486 829 244 273 811 811 1426;1427;1428;2833;2834 ASPVTSPAAAFPTASPANK 19 1 0 3 Phospho (STY) _AS(ph)PVT(ph)SPAAAFPTAS(ph)PANK_ AS(0.861)PVT(0.598)S(0.54)PAAAFPT(0.122)AS(0.878)PANK AS(5.11)PVT(0.6)S(-0.6)PAAAFPT(-8.47)AS(8.47)PANK 0 0 3 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;H0YHQ7 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1013.4106 2 1012.912 2023.80945 59786.76 0.24089 0.000244 0.076435 7.7422E-05 0.31733 0.00032143 1013.41429502958 1016.9187574356 98.482 0.60088 98.482 98.134 98.735 0 217 49 6 0 0 0 0.00014745 1 55813 47.75 41.905 10 0.59477 0.74282 0 67246000 38791000 28455000 487 829 244 274 812 812 1426;1427;1428;2833;2834 ASPVTTSPTAATTQNPVLSK 20 1 0 Phospho (STY) _ASPVTTS(ph)PTAATTQNPVLSK_ AS(0.012)PVT(0.065)T(0.294)S(0.484)PT(0.14)AAT(0.004)T(0.001)QNPVLSK AS(-15.9)PVT(-8.73)T(-2.17)S(2.17)PT(-5.4)AAT(-21.09)T(-26.11)QNPVLS(-48.86)K 0 0 1 0 A0A1B0GUH9;A2VCT1;Q96JN0 A0A1B0GUH9 A0A1B0GUH9 LCOR Ligand-dependent corepressor MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1026.0063 2 1026.00646 2049.99837 60451.12 0.39779 0.00040814 -0.0045218 -4.6394E-06 0.39327 0.0004035 1026.00603925085 1030.01390840884 85.637 0.6357 85.637 85.355 85.99 0 277 60 6 0 0 0 2.518E-08 1 46280 66.059 66.059 8 1.839 2.3312 0 41982000 15267000 26714000 488 385 245 275 813 813 647;648 ASPVTTSPTAATTQNPVLSK 20 1 0 Phospho (STY) _ASPVTTS(ph)PTAATTQNPVLSK_ AS(0.006)PVT(0.019)T(0.046)S(0.743)PT(0.181)AAT(0.004)T(0.001)QNPVLSK AS(-21.11)PVT(-15.97)T(-12.06)S(6.14)PT(-6.14)AAT(-23.11)T(-28.16)QNPVLS(-35.28)K 0 0 1 0 A0A1B0GUH9;A2VCT1;Q96JN0 A0A1B0GUH9 A0A1B0GUH9 LCOR Ligand-dependent corepressor MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1030.0145 2 1026.00646 2049.99837 60395.95 0.6332 0.00064967 0.42591 0.00043699 1.0591 0.0010867 1026.50758626016 1030.01404554223 90.406 1.0192 90.406 89.818 90.838 -7.6294E-06 573 97 8 0 0 0 3.5639E-05 1 57953 48.315 48.315 8 3.3289 2.1776 0 48488000 11078000 37411000 489 385 245 275 814 814 647;648 ASPVTTSPTAATTQNPVLSK 20 1 0 2 Phospho (STY) _AS(ph)PVTTS(ph)PTAATTQNPVLSK_ AS(0.897)PVT(0.102)T(0.004)S(0.85)PT(0.142)AAT(0.002)T(0.002)QNPVLSK AS(9.45)PVT(-9.45)T(-24.31)S(7.78)PT(-7.78)AAT(-25.79)T(-26.6)QNPVLS(-53.04)K 0 0 2 0 A0A1B0GUH9;A2VCT1;Q96JN0 A0A1B0GUH9 A0A1B0GUH9 LCOR Ligand-dependent corepressor MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1069.9985 2 1065.98962 2129.9647 59821.42 0.18403 0.00019617 0.28631 0.00030521 0.47034 0.00050138 1066.49150891493 1069.9970122495 88.252 0.92153 88.252 87.878 88.8 0 528 82 10 0 0 0 1.0861E-11 2 47956 81.807 81.807 28 1.4639 1.8133 0 156500000 61777000 94723000 490 385 245 276 815;816 815 647;648 ASQPDLVDTPTSSKPQPK 18 2 0 Unmodified _ASQPDLVDTPTSSKPQPK_ 0 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 638.0053 3 632.661817 1894.96362 77664.45 0.61548 0.00038939 -0.069189 -4.3774E-05 0.54629 0.00034562 632.996226311142 638.00447584301 71.43 0.60999 71.43 71.113 71.723 0 222 57 5 0 0 0 1.1469E-05 1 35860 61.096 55.252 1 1.9222 2.3624 0 33965000 13526000 20439000 491 994 246 277 817 817 ASSASAPSSTPTGTTVVK 18 1 0 Phospho (STY) _ASSASAPSS(ph)TPTGTTVVK_ AS(0.01)S(0.009)AS(0.009)APS(0.156)S(0.318)T(0.242)PT(0.081)GT(0.086)T(0.086)VVK AS(-14.91)S(-15.33)AS(-15.33)APS(-3.08)S(1.18)T(-1.18)PT(-5.92)GT(-5.67)T(-5.67)VVK 0 0 1 0 A0A024R3K9;A0A024R3N2;Q6P4R8 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 868.9152 2 864.906214 1727.79787 64262.48 0.85478 0.0007393 1.0282 0.00088927 1.8829 0.0016286 864.907451568755 868.913364301585 46.733 0.98055 46.733 46.169 47.15 0 432 91 7 0 0 0 0.00049697 1 27851 41.695 24.528 9 1.1839 0.80381 0 25642000 12835000 12807000 492 76 247 278 818 818 96 ASSLEDLVLK 10 1 0 Phospho (STY) _ASS(ph)LEDLVLK_ AS(0.002)S(0.998)LEDLVLK AS(-27.88)S(27.88)LEDLVLK 0 0 1 0 A0A024RCU1;B4E0N1;B4DM01;Q9NPK3;Q96BC0;O76046;Q15477 A0A024RCU1 A0A024RCU1 SKIV2L;SKI2W Helicase SKI2W MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 577.7889 2 577.788862 1153.56317 80629.11 0.82095 0.00047434 0.013095 7.5663E-06 0.83404 0.0004819 577.788774603789 581.795938506406 113.03 1.0031 113.03 112.59 113.59 0 387 94 6 0 0 0 2.7449E-06 2 66961 115.18 96.43 2 1.1884 1.4964 0 50981000 22777000 28205000 493 217 248 279 819;820 820 339 ASSLEDLVLK 10 1 0 Phospho (STY) _ASS(ph)LEDLVLK_ AS(0.004)S(0.996)LEDLVLK AS(-23.8)S(23.8)LEDLVLK 0 0 1 0 A0A024RCU1;B4E0N1;B4DM01;Q9NPK3;Q96BC0;O76046;Q15477 A0A024RCU1 A0A024RCU1 SKIV2L;SKI2W Helicase SKI2W MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 577.7889 2 577.788862 1153.56317 80519.16 0.76119 0.0004398 0.18125 0.00010473 0.94244 0.00054453 577.788956891197 581.796000612548 119.62 0.94355 119.62 119.21 120.15 0 427 82 6 0 0 0 0.0037748 3 77501 69.451 52.961 2 0.71816 0.49366 0 24543000 13930000 10613000 494 217 248 279 821;822;823 823 339 ASSLGEIDESSELR 14 0 1 Phospho (STY) _ASS(ph)LGEIDESSELR_ AS(0.308)S(0.692)LGEIDESSELR AS(-3.52)S(3.52)LGEIDES(-50.56)S(-53.68)ELR 0 0 1 0 Q16513 Q16513 Q16513 PKN2 Serine/threonine-protein kinase N2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 786.8437 2 786.843082 1571.67161 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.881 1 85.881 85.381 86.381 -7.6294E-06 0 0 0 1.6958E-05 1 46452 61.657 39.459 4 495 1078 249 280 824 824 2034 ASSLGEIDESSELR 14 0 1 Phospho (STY) _ASS(ph)LGEIDESSELR_ AS(0.215)S(0.785)LGEIDESSELR AS(-5.62)S(5.62)LGEIDES(-48.61)S(-51.73)ELR 0 0 1 0 Q16513 Q16513 Q16513 PKN2 Serine/threonine-protein kinase N2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 791.8471 2 786.843082 1571.67161 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.882 1 85.882 85.382 86.382 -7.6294E-06 0 0 0 3.4044E-05 1 46453 59.709 29.134 4 496 1078 249 280 825 825 2034 ASSPELPVSVENIK 14 1 0 Phospho (STY) _ASS(ph)PELPVSVENIK_ AS(0.223)S(0.777)PELPVSVENIK AS(-5.42)S(5.42)PELPVS(-40.6)VENIK 0 0 1 0 B3KPJ8;A0A0S2Z5X6;Q969R5 B3KPJ8 B3KPJ8 L3MBTL2 Lethal(3)malignant brain tumor-like protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 775.3799 2 775.379104 1548.74365 69182.73 0.92612 0.00071809 0.24811 0.00019238 1.1742 0.00091047 775.379222714708 779.386267501093 108.09 0.90191 108.09 107.75 108.65 0 378 69 8 0 0 0 0.0029999 2 63051 47.037 37.084 3 0.71108 0.88104 0 134750000 78611000 56141000 497 363 250 281 826;827 826 568 ASSPELPVSVENIK 14 1 0 Phospho (STY) _ASS(ph)PELPVSVENIK_ AS(0.187)S(0.812)PELPVSVENIK AS(-6.37)S(6.37)PELPVS(-36.76)VENIK 0 0 1 0 B3KPJ8;A0A0S2Z5X6;Q969R5 B3KPJ8 B3KPJ8 L3MBTL2 Lethal(3)malignant brain tumor-like protein 2 MULTI-SECPEP 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 775.9073 2 775.379104 1548.74365 69482.85 1.2567 0.00097445 -0.011032 -8.5542E-06 1.2457 0.0009659 775.379033386821 779.38625471438 114.54 0.98445 114.54 114.18 115.17 -7.6294E-06 459 93 8 0 0 0 0.034813 1 73635 41.378 41.378 3 1.6501 1.0888 0 62287000 22926000 39362000 498 363 250 281 828 828 568 ASSSDSEDSSEEEEEVQGPPAK 22 1 0 Phospho (STY) _AS(ph)SSDSEDSSEEEEEVQGPPAK_ AS(0.167)S(0.167)S(0.167)DS(0.167)EDS(0.167)S(0.167)EEEEEVQGPPAK AS(0)S(0)S(0)DS(0)EDS(0)S(0)EEEEEVQGPPAK 0 0 1 0 B2RAU8;A0A0A0MRM9;Q14978;S4R3C2 B2RAU8 B2RAU8 NOLC1 Nucleolar and coiled-body phosphoprotein 1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1191.464 2 1187.45812 2372.90168 NaN NaN NaN -0.17653 -0.00020963 NaN NaN NaN NaN 47.747 0.70239 47.747 47.316 48.019 -3.8147E-06 0 0 0 1.1349E-07 1 18561 57.804 52.42 6 NaN NaN 0 5940900 0 5940900 499 287 251 282 829 829 448;449;450;451;452;453 ASSVGVLSPQK 11 1 0 Phospho (STY) _ASSVGVLS(ph)PQK_ ASSVGVLS(1)PQK AS(-50.17)S(-37.84)VGVLS(37.84)PQK 0 0 1 0 Q2M3X1;B4DSN8;Q9UGU5 Q2M3X1 Q2M3X1 HMGXB4 HMG domain-containing protein 4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 580.7958 2 576.786653 1151.55875 80509.34 0.69601 0.00040145 0.027854 1.6066E-05 0.72387 0.00041752 576.786641977152 580.793706012577 53.814 0.93747 53.814 53.298 54.235 0 281 75 5 0 0 0 0.0072628 1 32583 63.181 44.077 3 2.1762 1.6312 0 8281500 2377800 5903700 500 657 252 283 830 830 1092 ASSVGVLSPQKK 12 2 0 Phospho (STY) _ASSVGVLS(ph)PQKK_ ASS(0.001)VGVLS(0.999)PQKK AS(-37.53)S(-31.69)VGVLS(31.69)PQKK 0 0 1 1 Q2M3X1;B4DSN8;Q9UGU5 Q2M3X1 Q2M3X1 HMGXB4 HMG domain-containing protein 4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 648.8492 2 640.834135 1279.65372 76448.6 1.2055 0.00077256 -0.12114 -7.7634E-05 1.0844 0.00069492 640.833978291895 648.848218334301 33.113 0.71533 33.113 32.826 33.542 0 278 56 8 0 0 0 0.0031577 1 17977 58.831 55.692 3 2.3183 1.8095 0 38042000 11496000 26546000 501 657 253 284 831 831 1092 ASTAASSALGFSK 13 1 0 Phospho (STY) _ASTAASSALGFS(ph)K_ ASTAASS(0.002)ALGFS(0.998)K AS(-103.01)T(-89.63)AAS(-36.86)S(-26.97)ALGFS(26.97)K 0 0 1 0 O96028;Q05CW4;H0Y9U6 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 639.3046 2 639.2923 1276.57005 NaN NaN NaN -0.52999 -0.00033882 NaN NaN NaN NaN 73.778 0.55827 73.778 73.516 74.074 0 0 0 0 2.8486E-16 1 37672 110.22 86.788 5 NaN NaN 0 4975900 4975900 0 502 953 254 285 832 832 1652 ATAGDTHLGGEDFDNR 16 0 1 Unmodified _ATAGDTHLGGEDFDNR_ 0 0 0 0 Q53FC7;B3KSM6;B2R6X5;P17066;B4DXY3;B4DFN9;B4DI39;B4DWK5;Q53FA3;B2RCQ9;A8K5I0;A0A0G2JIW1;B4DI54;Q59EJ3;P48741;P34931;P0DMV9;P0DMV8;B4DNV4;V9GZ37;B3KTT5;B4DVU9;B4E1S9;B4E388;B4DNT8;B4DHP5;Q9UQC1 Q53FC7 Q53FC7 HSPA6;HEL-S-103;HSPA7;HSPA1L;HSPA1B;HSPA1A;HSP70-1 Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7;Heat shock 70 kDa protein 1-like;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 559.2483 3 559.248407 1674.72339 80628.59 0.51528 0.00028817 -0.1449 -8.1034E-05 0.37039 0.00020714 559.248277074765 562.584334795575 73.187 1.065 73.187 72.737 73.802 0 490 94 9 0 0 0 6.5962E-37 3 37192 107.34 92.569 1 0.80354 1.0158 0 193650000 108710000 84939000 503 534 255 286 833;834;835 834 ATAGDTHLGGEDFDNR 16 0 1 Unmodified _ATAGDTHLGGEDFDNR_ 0 0 0 0 Q53FC7;B3KSM6;B2R6X5;P17066;B4DXY3;B4DFN9;B4DI39;B4DWK5;Q53FA3;B2RCQ9;A8K5I0;A0A0G2JIW1;B4DI54;Q59EJ3;P48741;P34931;P0DMV9;P0DMV8;B4DNV4;V9GZ37;B3KTT5;B4DVU9;B4E1S9;B4E388;B4DNT8;B4DHP5;Q9UQC1 Q53FC7 Q53FC7 HSPA6;HEL-S-103;HSPA7;HSPA1L;HSPA1B;HSPA1A;HSP70-1 Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7;Heat shock 70 kDa protein 1-like;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 843.3749 2 838.368972 1674.72339 69537.47 0.56134 0.00047061 -0.23021 -0.000193 0.33113 0.00027761 838.368732548815 843.373243920269 73.192 0.52216 73.192 72.94 73.462 0 132 45 6 0 0 0 0.00070963 1 37108 51.013 35.441 1 0.76343 0.93882 0 26784000 12315000 14470000 504 534 255 286 836 836 ATAGDTHLGGEDFDNR 16 0 1 Unmodified _ATAGDTHLGGEDFDNR_ 0 0 0 0 Q53FC7;B3KSM6;B2R6X5;P17066;B4DXY3;B4DFN9;B4DI39;B4DWK5;Q53FA3;B2RCQ9;A8K5I0;A0A0G2JIW1;B4DI54;Q59EJ3;P48741;P34931;P0DMV9;P0DMV8;B4DNV4;V9GZ37;B3KTT5;B4DVU9;B4E1S9;B4E388;B4DNT8;B4DHP5;Q9UQC1 Q53FC7 Q53FC7 HSPA6;HEL-S-103;HSPA7;HSPA1L;HSPA1B;HSPA1A;HSP70-1 Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7;Heat shock 70 kDa protein 1-like;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 559.5828 3 559.248407 1674.72339 83310.36 0.74452 0.00041637 0.032233 1.8026E-05 0.77675 0.0004344 559.248446146582 562.584642726034 39.177 1.1915 39.177 38.522 39.714 0 279 103 5 0 0 0 0.0003358 1 22695 30.072 19.438 1 0.81324 0.65675 0 7488500 3480900 4007600 505 534 255 286 837 837 ATDIPASASPPPVAGVPFFK 20 1 0 Phospho (STY) _ATDIPAS(ph)ASPPPVAGVPFFK_ ATDIPAS(0.5)AS(0.5)PPPVAGVPFFK AT(-30.7)DIPAS(0)AS(0)PPPVAGVPFFK 0 0 1 0 Q8N1G0;F8WCX2 Q8N1G0 Q8N1G0 ZNF687 Zinc finger protein 687 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1025.5107 2 1025.00827 2048.00199 60742.81 0.46402 0.00047562 0.29384 0.00030119 0.75786 0.00077682 1025.51001127483 1029.51709391649 129.96 0.68221 129.96 129.65 130.33 1.5259E-05 487 64 10 0 0 0 3.9649E-07 3 79199 57.802 57.802 3 0.73913 0.91923 0 83026000 47473000 35552000 506 1150 256 287 838;839;840 840 2213;2214 ATDTSQGELVHPK 13 1 0 Acetyl (Protein N-term),Phospho (STY) _(ac)ATDTS(ph)QGELVHPK_ ATDT(0.001)S(0.999)QGELVHPK AT(-73.02)DT(-32.94)S(32.94)QGELVHPK 1 0 1 0 X6RGJ2;Q5SSJ5;B0QZK9;B0QZK8 X6RGJ2 X6RGJ2 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 752.8384 2 752.837603 1503.66065 70232.53 0.84728 0.00063786 0.025011 1.8829E-05 0.87229 0.00065669 752.837732588 756.844688811487 63.45 1.6377 63.45 62.519 64.156 0 711 130 7 0 0 0 2.1684E-42 4 29836 162.48 143.57 3 0.3011 0.37298 0 149900000 118750000 31143000 507 1099 257 288 841;842;843;844 842 2079 ATDTSQGELVHPK 13 1 0 Acetyl (Protein N-term),Phospho (STY) _(ac)ATDTS(ph)QGELVHPK_ ATDT(0.001)S(0.999)QGELVHPK AT(-51.17)DT(-28.8)S(28.8)QGELVHPK 1 0 1 0 X6RGJ2;Q5SSJ5;B0QZK9;B0QZK8 X6RGJ2 X6RGJ2 HP1BP3 Heterochromatin protein 1-binding protein 3 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 752.8386 2 752.837603 1503.66065 NaN NaN NaN -0.10065 -7.5774E-05 NaN NaN NaN NaN 59.249 1.8187 59.249 58.413 60.231 -3.8147E-06 0 0 0 1.918E-17 1 36643 113.69 92.023 3 NaN NaN 0 185070000 185070000 0 508 1099 257 288 845 845 2079 ATGNDLRPPPPSPSSDLTHPMK 22 1 1 Oxidation (M),Phospho (STY) _ATGNDLRPPPPS(ph)PSSDLTHPM(ox)K_ ATGNDLRPPPPSPSSDLTHPM(1)K ATGNDLRPPPPS(0.992)PS(0.002)S(0.003)DLT(0.003)HPMK ATGNDLRPPPPSPSSDLTHPM(80.71)K AT(-64.44)GNDLRPPPPS(25.19)PS(-26.11)S(-25.19)DLT(-25.19)HPMK 0 1 1 1 A0A075B784;A0A024R8V6;Q9P275;B3KMW2 A0A075B784 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 810.7149 3 804.373551 2410.09882 69009.77 0.86719 0.00069754 -0.24912 -0.00020038 0.61807 0.00049716 804.373279905177 810.381557663559 79.828 0.86837 79.828 79.32 80.188 0 174 79 5 0 0 0 8.3708E-16 2 42069 80.711 70.386 5 1.3862 1.6108 0 29826000 11693000 18133000 509 157 258 289 846;847 846 35 240 ATGNDLRPPPPSPSSDLTHPMK 22 1 1 Oxidation (M),Phospho (STY) _ATGNDLRPPPPS(ph)PSSDLTHPM(ox)K_ ATGNDLRPPPPSPSSDLTHPM(1)K ATGNDLRPPPPS(0.454)PS(0.082)S(0.082)DLT(0.382)HPMK ATGNDLRPPPPSPSSDLTHPM(48.87)K AT(-41.25)GNDLRPPPPS(0.75)PS(-7.44)S(-7.44)DLT(-0.75)HPMK 0 1 1 1 A0A075B784;A0A024R8V6;Q9P275;B3KMW2 A0A075B784 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 804.3749 3 804.373551 2410.09882 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.516 1 79.516 79.016 80.016 0 0 0 0 0.00018388 1 41932 48.867 39.9 5 510 157 258 289 848 848 35 240 ATGPPVSELITK 12 1 0 Unmodified _ATGPPVSELITK_ 0 0 0 0 P16401 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 606.846 2 606.845353 1211.67615 78876.96 0.97324 0.0005906 0.46203 0.00028038 1.4353 0.00087099 606.845535907229 610.852514178752 95.484 0.25679 95.484 95.4 95.657 0 107 24 5 0 0 0 0.024093 1 53754 59.542 36.222 1 0.57589 0.72726 0 46854000 30367000 16487000 511 966 259 290 849 849 ATGPPVSELITK 12 1 0 Unmodified _ATGPPVSELITK_ 0 0 0 0 P16401 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 606.8458 2 606.845353 1211.67615 78876.92 1.1143 0.00067621 -0.037283 -2.2625E-05 1.077 0.00065358 606.845233303348 610.852382932848 96.104 1.2909 96.104 95.638 96.929 0 266 108 5 0 0 0 0.01805 2 54326 65.5 46.147 1 0.55377 0.69792 0 49703000 31859000 17843000 512 966 259 290 850;851 850 ATGPPVSELITK 12 1 0 Unmodified _ATGPPVSELITK_ 0 0 0 0 P16401 P16401 P16401 HIST1H1B Histone H1.5 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 610.8532 2 606.845353 1211.67615 NaN NaN NaN 0.058849 3.5712E-05 NaN NaN NaN NaN 95.022 0.24416 95.022 94.814 95.058 -7.6294E-06 0 0 0 0.002582 1 53243 73.781 46.478 1 NaN NaN 0 25053000 0 25053000 513 966 259 290 852 852 ATGPPVSELITK 12 1 0 Unmodified _ATGPPVSELITK_ 0 0 0 0 P16401 P16401 P16401 HIST1H1B Histone H1.5 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 610.8524 2 606.845353 1211.67615 NaN NaN NaN 0.054678 3.3181E-05 NaN NaN NaN NaN 95.781 0.30836 95.781 95.638 95.947 7.6294E-06 0 0 0 0.0035972 1 53795 69.65 43.843 1 NaN NaN 0 14539000 0 14539000 514 966 259 290 853 853 ATGPPVSELITK 12 1 0 Unmodified _ATGPPVSELITK_ 0 0 0 0 P16401 P16401 P16401 HIST1H1B Histone H1.5 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 606.8458 2 606.845353 1211.67615 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.856 1 94.856 94.356 95.356 7.6294E-06 0 0 0 0.0068715 1 53183 48.004 28.217 1 515 966 259 290 854 854 ATGPPVSELITK 12 1 0 Unmodified _ATGPPVSELITK_ 0 0 0 0 P16401 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 606.8458 2 606.845353 1211.67615 78632.52 1.0855 0.00065874 0.040133 2.4354E-05 1.1256 0.00068309 606.845277127845 610.852344531749 89.499 1.8017 89.499 88.421 90.223 0 497 173 5 0 0 0 0.024075 2 57406 59.57 36.105 1 0.47997 0.36627 0 17642000 11532000 6110000 516 966 259 290 855;856 856 ATGPPVSELITK 12 1 0 Phospho (STY) _ATGPPVS(ph)ELITK_ ATGPPVS(1)ELITK AT(-99.13)GPPVS(61.3)ELIT(-61.3)K 0 0 1 0 P16401 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 646.8293 2 646.828518 1291.64248 75563.56 1.3545 0.00087613 0.92199 0.00059637 2.2765 0.0014725 646.828997603509 650.836172723784 103.09 1.1737 103.09 102.48 103.66 -7.6294E-06 459 84 8 0 0 0 1.0657E-32 3 59627 152.16 100.91 3 0.61606 0.76613 0 83601000 49740000 33861000 517 966 259 291 857;858;859 858 1711 ATGPPVSELITK 12 1 0 Phospho (STY) _ATGPPVS(ph)ELITK_ ATGPPVS(0.749)ELIT(0.251)K AT(-44.14)GPPVS(4.75)ELIT(-4.75)K 0 0 1 0 P16401 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 646.8289 2 646.828518 1291.64248 75646.86 1.2866 0.00083223 -0.26329 -0.00017031 1.0233 0.00066193 646.828331402926 650.83532258147 108.08 1.1885 108.08 107.49 108.68 0 686 115 9 0 0 0 0.0087811 3 69248 52.527 33.407 3 0.44226 0.29292 0 70195000 48696000 21499000 518 966 259 291 860;861;862 860 1711 ATIAGGGVIPHIHK 14 1 0 Unmodified _ATIAGGGVIPHIHK_ 0 0 0 0 Q71UI9;P0C0S5 Q71UI9 Q71UI9 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 460.2727 3 457.601616 1369.78302 88626.68 0.37434 0.0001713 -0.26842 -0.00012283 0.10592 4.8469E-05 457.601486659539 460.272826379505 125 1.8927 125 123.36 125.26 0 595 171 5 0 0 0 0.0012258 3 75284 50.222 50.222 1 0.67738 0.84607 0 67049000 44210000 22840000 519 961 260 292 863;864;865 864 ATIAGGGVIPHIHK 14 1 0 Unmodified _ATIAGGGVIPHIHK_ 0 0 0 0 Q71UI9;P0C0S5 Q71UI9 Q71UI9 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 685.8986 2 685.898786 1369.78302 73641.48 0.87626 0.00060103 -0.40213 -0.00027582 0.47413 0.0003252 685.898519248376 689.905597518044 125.73 1.1166 125.73 124.95 126.07 0 211 102 4 0 0 0 0.0086436 1 76053 60.102 60.102 1 0.63826 0.76012 0 12186000 6300900 5885200 520 961 260 292 866 866 ATIAGGGVIPHIHK 14 1 0 Unmodified _ATIAGGGVIPHIHK_ 0 0 0 0 Q71UI9;P0C0S5 Q71UI9 Q71UI9 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 457.6017 3 457.601616 1369.78302 88444.88 0.43332 0.00019829 -0.34997 -0.00016015 0.083351 3.8141E-05 457.601475314699 460.272756585949 125.84 1.4795 125.84 124.58 126.06 0 646 137 8 0 0 0 0.0010877 2 76158 61.11 61.11 1 0.67712 0.83898 0 133980000 78087000 55891000 521 961 260 292 867;868 867 ATIAGGGVIPHIHK 14 1 0 Unmodified _ATIAGGGVIPHIHK_ 0 0 0 0 Q71UI9;P0C0S5 Q71UI9 Q71UI9 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 685.899 2 685.898786 1369.78302 73753.54 0.87992 0.00060354 -0.071809 -4.9254E-05 0.80811 0.00055428 685.898780802502 689.905695406342 126.36 0.82155 126.36 125.68 126.5 0 246 72 5 0 0 0 2.2447E-07 2 76541 105.98 105.98 1 0.7077 0.84697 0 13908000 6580100 7327900 522 961 260 292 869;870 870 ATIAGGGVIPHIHK 14 1 0 Unmodified _ATIAGGGVIPHIHK_ 0 0 0 0 Q71UI9;P0C0S5 Q71UI9 Q71UI9 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 457.6015 3 457.601616 1369.78302 88444.88 0.43656 0.00019977 -0.42186 -0.00019304 0.014705 6.7292E-06 457.601528118094 460.272705991425 127.7 4.9482 127.7 125.93 130.88 0 2640 444 8 0 0 0 0.0010842 8 76632 61.375 54.313 1 0.69397 0.85845 0 283960000 166020000 117940000 523 961 260 292 871;872;873;874;875;876;877;878 871 ATIAGGGVIPHIHK 14 1 0 Unmodified _ATIAGGGVIPHIHK_ 0 0 0 0 Q71UI9;P0C0S5 Q71UI9 Q71UI9 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 685.8997 2 685.898786 1369.78302 73641.51 0.8864 0.00060798 -0.095687 -6.5632E-05 0.79071 0.00054235 685.898717982998 689.905791928176 127.13 1.7807 127.13 126.49 128.27 0 467 161 4 0 0 0 3.2485E-11 3 77056 112.75 112.75 1 0.66489 0.81268 0 19301000 11139000 8162600 524 961 260 292 879;880;881 880 ATIAGGGVIPHIHK 14 1 0 Unmodified _ATIAGGGVIPHIHK_ 0 0 0 0 Q71UI9;P0C0S5 Q71UI9 Q71UI9 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 689.9064 2 685.898786 1369.78302 NaN NaN NaN -0.18893 -0.00012959 NaN NaN NaN NaN 127.68 1.1178 127.68 127.53 128.65 0 0 0 0 0.00088474 1 77474 68.893 46.807 1 NaN NaN 0 7020800 0 7020800 525 961 260 292 882 882 ATIAGGGVIPHIHK 14 1 0 Unmodified _ATIAGGGVIPHIHK_ 0 0 0 0 Q71UI9;P0C0S5 Q71UI9 Q71UI9 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 685.8993 2 685.898786 1369.78302 NaN NaN NaN 0.11591 7.9504E-05 NaN NaN NaN NaN 128.36 0.67949 128.36 128.27 128.95 0 0 0 0 0.00065777 1 78062 70.1 44.714 1 NaN NaN 0 2914300 2914300 0 526 961 260 292 883 883 ATIAGGGVIPHIHK 14 1 0 Unmodified _ATIAGGGVIPHIHK_ 0 0 0 0 Q71UI9;P0C0S5 Q71UI9 Q71UI9 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 689.9069 2 685.898786 1369.78302 NaN NaN NaN NaN NaN NaN NaN NaN NaN 124.62 1 124.62 124.12 125.12 0 0 0 0 0.0061774 1 75547 43.77 31.922 1 527 961 260 292 884 884 ATIAGGGVIPHIHK 14 1 0 Unmodified _ATIAGGGVIPHIHK_ 0 0 0 0 Q71UI9;P0C0S5 Q71UI9 Q71UI9 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 460.2729 3 457.601616 1369.78302 NaN NaN NaN NaN NaN NaN NaN NaN NaN 124.96 1 124.96 124.46 125.46 -7.6294E-06 0 0 0 0.00025291 1 75751 55.314 41.545 1 528 961 260 292 885 885 ATIAGGGVIPHIHK 14 1 0 Unmodified _ATIAGGGVIPHIHK_ 0 0 0 0 Q71UI9;P0C0S5 Q71UI9 Q71UI9 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 689.9067 2 685.898786 1369.78302 NaN NaN NaN NaN NaN NaN NaN NaN NaN 125.39 1 125.39 124.89 125.89 0 0 0 0 4.6887E-05 1 75984 60.518 39.055 1 529 961 260 292 886 886 ATNESEDEIPQLVPIGK 17 1 0 Phospho (STY) _ATNES(ph)EDEIPQLVPIGK_ AT(0.007)NES(0.993)EDEIPQLVPIGK AT(-21.37)NES(21.37)EDEIPQLVPIGK 0 0 1 0 Q32Q62;J3QSV6;A0PJ61;O76021 Q32Q62 Q32Q62 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 960.9559 2 960.453528 1918.8925 60010.73 0.41393 0.00039756 -0.27327 -0.00026246 0.14066 0.00013509 960.453586819538 964.460765296271 145.27 0.058502 145.27 145.25 145.31 0 18 2 9 0 0 0 4.3768E-30 1 83662 122.14 102.81 2 0.41999 0.5297 0 30273000 20963000 9309800 530 1084 261 293 887 887 2041;2934 ATNESEDEIPQLVPIGK 17 1 0 Phospho (STY) _ATNES(ph)EDEIPQLVPIGK_ AT(0.173)NES(0.827)EDEIPQLVPIGK AT(-6.81)NES(6.81)EDEIPQLVPIGK 0 0 1 0 Q32Q62;J3QSV6;A0PJ61;O76021 Q32Q62 Q32Q62 RSL1D1 Ribosomal L1 domain-containing protein 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 960.4543 2 960.453528 1918.8925 NaN NaN NaN -0.002179 -2.0928E-06 NaN NaN NaN NaN 118.98 2.7681 118.98 118.49 121.26 0 0 0 0 2.8652E-99 2 71739 162.81 145.11 2 NaN NaN 0 5661900000 5661900000 0 531 1084 261 293 888;889 889 2041;2934 ATNESEDEIPQLVPIGK 17 1 0 Phospho (STY) _AT(ph)NESEDEIPQLVPIGK_ AT(0.5)NES(0.5)EDEIPQLVPIGK AT(0)NES(0)EDEIPQLVPIGK 0 0 1 0 Q32Q62;J3QSV6;A0PJ61;O76021 Q32Q62 Q32Q62 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 960.9559 2 960.453528 1918.8925 61143.37 0.76467 0.00073443 0.38125 0.00036618 1.1459 0.0011006 960.454041625584 964.460954684766 125.77 1.2489 125.77 124.96 126.21 0 785 115 11 0 0 0 0.0005332 1 81386 54.281 43.336 2 0.53833 0.35985 0 153760000 101350000 52409000 532 1084 261 293 890 890 2041;2934 ATNESEDEIPQLVPIGK 17 1 0 Phospho (STY) _ATNES(ph)EDEIPQLVPIGK_ AT(0.287)NES(0.713)EDEIPQLVPIGK AT(-3.94)NES(3.94)EDEIPQLVPIGK 0 0 1 0 Q32Q62;J3QSV6;A0PJ61;O76021 Q32Q62 Q32Q62 RSL1D1 Ribosomal L1 domain-containing protein 1 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 960.4589 2 960.453528 1918.8925 NaN NaN NaN 0.063462 6.0952E-05 NaN NaN NaN NaN 126.7 3.1153 126.7 126.16 129.28 0 0 0 0 2.7825E-30 3 83121 116.96 102.14 2 NaN NaN 0 8717800000 8717800000 0 533 1084 261 293 891;892;893 893 2041;2934 ATNESEDEIPQLVPIGK 17 1 0 Phospho (STY) _AT(ph)NESEDEIPQLVPIGK_ AT(0.669)NES(0.331)EDEIPQLVPIGK AT(3.06)NES(-3.06)EDEIPQLVPIGK 0 0 1 0 Q32Q62;J3QSV6;A0PJ61;O76021 Q32Q62 Q32Q62 RSL1D1 Ribosomal L1 domain-containing protein 1 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 964.4613 2 960.453528 1918.8925 NaN NaN NaN -3.1099 -0.0029869 NaN NaN NaN NaN 126.7 1.8081 126.7 126.33 128.14 0 0 0 0 5.9411E-08 2 82349 84.41 68.52 2 NaN NaN 0 4816000000 0 4816000000 534 1084 261 293 894;895 895 2041;2934 ATNESEDEIPQLVPIGK 17 1 0 Unmodified _ATNESEDEIPQLVPIGK_ 0 0 0 0 Q32Q62;J3QSV6;A0PJ61;O76021 Q32Q62 Q32Q62 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 924.9536 2 920.470363 1838.92617 68245.15 0.36701 0.00033782 0.042713 3.9316E-05 0.40972 0.00037714 920.469163145458 924.47802477304 114.25 0.6274 114.25 113.95 114.58 0 213 54 5 0 0 0 0.0077669 1 68073 32.498 32.498 1 0.65322 0.79404 0 18014000 9534200 8480000 535 1084 261 294 896 896 ATNESEDEIPQLVPIGK 17 1 0 Unmodified _ATNESEDEIPQLVPIGK_ 0 0 0 0 Q32Q62;J3QSV6;A0PJ61;O76021 Q32Q62 Q32Q62 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-SECPEP 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 925.0717 2 920.470363 1838.92617 64477.8 1.1031 0.0010154 0.71611 0.00065916 1.8192 0.0016745 920.471098682612 924.478007202904 116.74 0.84833 116.74 116.31 117.16 0 462 80 8 0 0 0 0.0056481 1 75130 35.204 35.204 1 0.63737 0.4141 0 33325000 20589000 12736000 536 1084 261 294 897 897 ATSPSSSVSGDFDDGHHSVSTPGPSR 26 0 1 Phospho (STY) _ATS(ph)PSSSVSGDFDDGHHSVSTPGPSR_ AT(0.385)S(0.581)PS(0.03)S(0.002)S(0.001)VSGDFDDGHHSVSTPGPSR AT(-1.79)S(1.79)PS(-12.89)S(-23.86)S(-28.56)VS(-32.56)GDFDDGHHS(-39.51)VS(-41.02)T(-41.02)PGPS(-44.07)R 0 0 1 0 E7EVG2;Q86U86;C9J409;C9JCJ2;C9J053;C9JQF1;C9JPI5 E7EVG2 E7EVG2 PBRM1 Protein polybromo-1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 888.0435 3 884.371704 2650.09328 64924.92 0.82491 0.00072953 -0.33019 -0.00029201 0.49472 0.00043752 884.705769670913 887.707658060358 75.639 0.78176 75.639 75.313 76.094 0 260 66 6 0 0 0 5.1269E-09 1 38836 45.685 40.024 10 0.68139 0.859 0 61626000 32364000 29262000 537 794 262 295 898 898 1364 ATSSSNPSSPAPDWYK 16 1 0 Phospho (STY) _ATSSSNPSS(ph)PAPDWYK_ ATSSSNPS(0.032)S(0.967)PAPDWYK AT(-38.56)S(-33.01)S(-38.39)S(-39.03)NPS(-14.85)S(14.85)PAPDWY(-44.51)K 0 0 1 0 A4LAA3;P46100;B4DLE1;B4DHH8 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 887.8691 2 887.869631 1773.72471 65378.09 0.77405 0.00068725 0.38623 0.00034292 1.1603 0.0010302 887.869982174019 891.877044442488 74.661 1.0043 74.661 74.035 75.039 0 280 88 5 0 0 0 8.3818E-06 2 38511 72.175 72.175 7 0.88073 1.0979 0 25730000 13548000 12182000 538 422 263 296 899;900 900 714;715 ATSSSNPSSPAPDWYK 16 1 0 2 Phospho (STY) _ATS(ph)SSNPSS(ph)PAPDWYK_ AT(0.023)S(0.925)S(0.049)S(0.003)NPS(0.021)S(0.979)PAPDWYK AT(-16.16)S(12.77)S(-12.77)S(-24.99)NPS(-16.7)S(16.7)PAPDWY(-50.68)K 0 0 2 0 A4LAA3;P46100;B4DLE1;B4DHH8 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 928.3539 2 927.852797 1853.69104 64944.98 0.79105 0.00073398 0.12949 0.00012015 0.92054 0.00085413 928.354283893419 931.859881649662 80.957 1.0004 80.957 80.511 81.512 0 327 92 5 0 0 0 4.5613E-10 2 42882 90.498 75.525 21 0.7696 0.97692 0 40185000 21749000 18437000 539 422 263 297 901;902 902 714;715 AVATYHANTER 11 0 1 Unmodified _AVATYHANTER_ 0 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6;A5D6X0 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 411.5383 3 411.538793 1231.59455 94458.46 0.28052 0.00011544 -0.25758 -0.000106 0.022941 9.4413E-06 411.538611491264 414.874755086605 60.816 0.16559 60.816 60.723 60.888 0 56 11 6 0 0 0 0.0054778 1 27775 47.559 41.526 1 0.80594 0.96294 0 16654000 8993600 7660900 540 434 264 298 903 903 AVFPSIVGRPR 11 0 2 Unmodified _AVFPSIVGRPR_ 0 0 0 1 B4E335;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;P0CG38;C9JUM1;F8WCH0;B4E3A4;P63261;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;Q6S8J3;A5A3E0;A1E282;B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;Q13707;B3KW67;A8K3K1;Q7Z7J6;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1 B4E335;B4E3A4;B7Z6P1 B4E3A4 PS1TP5BP1;ACTB;POTEI;ACTG2;ACTG1;POTEE;POTEF;ACTA2;ACTA1;ACTC1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member I;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 406.9123 3 400.240018 1197.69823 98733.13 -0.32234 -0.00012901 0.54127 0.00021664 0.21894 8.7627E-05 400.240200813434 406.912336248597 111.63 0.42055 111.63 111.42 111.84 -7.6294E-06 92 34 5 0 0 0 0.019816 1 66009 55.401 45.968 1 2.2064 2.7151 0 27620000 7901900 19719000 541 683;685;711 265 299 904 904 AVFPSIVGRPR 11 0 2 Unmodified _AVFPSIVGRPR_ 0 0 0 1 B4E335;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;P0CG38;C9JUM1;F8WCH0;B4E3A4;P63261;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;Q6S8J3;A5A3E0;A1E282;B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;Q13707;B3KW67;A8K3K1;Q7Z7J6;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1 B4E335;B4E3A4;B7Z6P1 B4E3A4 PS1TP5BP1;ACTB;POTEI;ACTG2;ACTG1;POTEE;POTEF;ACTA2;ACTA1;ACTC1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member I;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 406.9119 3 400.240018 1197.69823 94181.15 0.33199 0.00013288 -0.052862 -2.1157E-05 0.27913 0.00011172 400.240105490943 406.912108824425 88.135 0.46387 88.135 87.967 88.43 0 91 43 4 0 0 0 0.013486 1 56658 65.278 47.804 1 2.7267 2.5041 0 4853400 1647200 3206300 542 683;685;711 265 299 905 905 AVFVDLEPTVIDEVR 15 0 1 Unmodified _AVFVDLEPTVIDEVR_ 0 0 0 0 B3KT06;B3KPS3;Q53GA7;A8JZY9;F5H5D3;B7Z1K5;Q9BQE3;Q71U36;P68363;B4DN58;F8VQQ4;F8VVB9;F8VRK0;F8VX09;F8VWV9;F8VRZ4;F8VS66;Q8N532 B3KT06 B3KT06 TUBA1C;TUBA1A;TUBA1B Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 856.461 2 851.456527 1700.8985 NaN NaN NaN NaN NaN NaN NaN NaN NaN 127.46 1 127.46 126.96 127.96 0 0 0 0 0.0024276 1 77358 45.879 31.46 1 543 437 266 300 906 906 AVITPDFEK 9 1 0 Phospho (STY) _AVIT(ph)PDFEK_ AVIT(1)PDFEK AVIT(81.77)PDFEK 0 0 1 0 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 554.2629 2 550.257198 1098.49984 NaN NaN NaN -0.1969 -0.00010834 NaN NaN NaN NaN 87.634 0.70403 87.634 87.413 88.117 -7.6294E-06 0 0 0 0.00022194 1 47643 81.771 40.371 1 NaN NaN 0 9756600 0 9756600 544 1097 267 301 907 907 2938 AVITPDFEK 9 1 0 Phospho (STY) _AVIT(ph)PDFEK_ AVIT(1)PDFEK AVIT(56.4)PDFEK 0 0 1 0 Q5QJE6 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 550.2576 2 550.257198 1098.49984 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.948 1 87.948 87.448 88.448 0 0 0 0 0.022328 1 47918 56.404 21.712 1 545 1097 267 301 908 908 2938 AVLSDSPQLSEGK 13 1 0 Phospho (STY) _AVLSDS(ph)PQLSEGK_ AVLS(0.002)DS(0.992)PQLS(0.007)EGK AVLS(-27.7)DS(21.76)PQLS(-21.76)EGK 0 0 1 0 Q5SYF9;Q5VY60;Q7Z4H7 Q5SYF9 Q5SYF9 HAUS6 HAUS augmin-like complex subunit 6 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 709.8372 2 705.829247 1409.64394 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.808 1 69.808 69.308 70.308 0 0 0 0 0.0037008 1 34799 98.942 58.217 3 546 1101 268 302 909 909 2084 AVLSDSPQLSEGK 13 1 0 Phospho (STY) _AVLSDS(ph)PQLSEGK_ AVLS(0.013)DS(0.976)PQLS(0.011)EGK AVLS(-18.69)DS(18.69)PQLS(-19.67)EGK 0 0 1 0 Q5SYF9;Q5VY60;Q7Z4H7 Q5SYF9 Q5SYF9 HAUS6 HAUS augmin-like complex subunit 6 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 709.8367 2 705.829247 1409.64394 72723.08 1.0931 0.00077154 0.064598 4.5595E-05 1.1577 0.00081714 705.829539343762 709.835758678306 68.999 1.2319 68.999 68.406 69.638 0 352 107 6 0 0 0 0.0021884 1 43240 68.972 51.108 3 1.2753 0.99505 0 13919000 5942100 7977200 547 1101 268 302 910 910 2084 AVPPVSPELR 10 0 1 Phospho (STY) _AVPPVS(ph)PELR_ AVPPVS(1)PELR AVPPVS(51.01)PELR 0 0 1 0 Q96JM3 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 577.7964 2 572.791739 1143.56892 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.093 1 84.093 83.593 84.593 -7.6294E-06 0 0 0 0.0070931 1 45212 51.013 20.621 1 548 1180 269 303 911 911 2315 AVPPVSPELR 10 0 1 Phospho (STY) _AVPPVS(ph)PELR_ AVPPVS(1)PELR AVPPVS(71.56)PELR 0 0 1 0 Q96JM3 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 577.796 2 572.791739 1143.56892 81087.2 0.48608 0.00027842 0.25129 0.00014394 0.73736 0.00042236 572.791788799242 577.796059940655 85.62 2.1129 85.62 84.517 86.63 0 797 194 6 0 0 0 0.002671 3 54779 71.555 42.599 1 1.5231 1.0933 0 28289000 11178000 17112000 549 1180 269 303 912;913;914 912 2315 AVREPPEDEEEEDGREK 17 1 2 Unmodified _AVREPPEDEEEEDGREK_ 0 0 0 2 B3KRQ2;Q86XI2;B4DHE5;B4DXB7;Q9NXD3;H0Y6U5 B3KRQ2 B3KRQ2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 681.3159 3 671.971379 2012.89231 73944.59 0.528 0.0003548 0.14182 9.5299E-05 0.66981 0.0004501 672.305801218567 681.31567416964 66.073 0.49597 66.073 65.849 66.345 0 146 38 5 0 0 0 5.7082E-07 3 31955 73.093 68.121 1 0.73434 0.84146 0 34250000 19381000 14869000 550 593 270 304 915;916;917 917 AVREPPEDEEEEDGREK 17 1 2 Unmodified _AVREPPEDEEEEDGREK_ 0 0 0 2 B3KRQ2;Q86XI2;B4DHE5;B4DXB7;Q9NXD3;H0Y6U5 B3KRQ2 B3KRQ2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 504.2307 4 504.230353 2012.89231 84176.27 0.21351 0.00010766 0.10348 5.218E-05 0.31699 0.00015984 504.230625361375 511.238053657964 66.072 0.8551 66.072 65.614 66.47 0 385 65 9 0 0 0 0.0010366 2 31998 33.36 27.818 1 0.85181 1.0028 0 157850000 81038000 76814000 551 593 270 304 918;919 918 AVSDKFSPEAASR 13 1 1 Phospho (STY) _AVSDKFS(ph)PEAASR_ AVS(0.003)DKFS(0.961)PEAAS(0.037)R AVS(-25.79)DKFS(14.17)PEAAS(-14.17)R 0 0 1 1 E7EPW5;G3XAH9;E9PCV1;B7Z4U3;B7Z4L1;A8K8K7;E7ENZ9;C9JU30;B7Z573;E7EPD9;H7BXS2;X5DRA0;Q9NRC1 E7EPW5 E7EPW5 ST7 Suppressor of tumorigenicity 7 protein MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 731.8387 2 722.827038 1443.63952 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.137 1 63.137 62.637 63.637 -3.8147E-06 0 0 0 0.0081893 1 29665 42.52 31.261 3 552 494 271 305 920 920 849 AVSDKFSPEAASR 13 1 1 Phospho (STY) _AVSDKFS(ph)PEAASR_ AVS(0.031)DKFS(0.962)PEAAS(0.007)R AVS(-14.96)DKFS(14.96)PEAAS(-21.19)R 0 0 1 1 E7EPW5;G3XAH9;E9PCV1;B7Z4U3;B7Z4L1;A8K8K7;E7ENZ9;C9JU30;B7Z573;E7EPD9;H7BXS2;X5DRA0;Q9NRC1 E7EPW5 E7EPW5 ST7 Suppressor of tumorigenicity 7 protein MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 731.8398 2 722.827038 1443.63952 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.179 1 63.179 62.679 63.679 -3.8147E-06 0 0 0 0.01175 1 29695 40.941 28.673 3 553 494 271 305 921 921 849 AVSPLDPSK 9 1 0 Phospho (STY) _AVS(ph)PLDPSK_ AVS(1)PLDPSK AVS(34.98)PLDPS(-34.98)K 0 0 1 0 Q14865 Q14865 Q14865 ARID5B AT-rich interactive domain-containing protein 5B MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 501.2443 2 497.236265 992.457977 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.708 1 47.708 47.208 48.208 0 0 0 0 0.0036163 1 28614 62.466 31.044 2 554 1065 272 306 922 922 2002 AVSTVVVTTAPSPK 14 1 0 Phospho (STY) _AVSTVVVTTAPS(ph)PK_ AVSTVVVT(0.004)T(0.022)APS(0.974)PK AVS(-72.93)T(-67.25)VVVT(-23.61)T(-16.51)APS(16.51)PK 0 0 1 0 A0A024R3K9;A0A024R3N2;Q6P4R8 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 722.8811 2 718.873457 1435.73236 71928.06 0.74254 0.00053379 -0.60328 -0.00043368 0.13926 0.00010011 718.872559208485 722.88048854507 78.497 2.4279 78.497 77.823 80.251 -7.6294E-06 754 207 6 0 0 0 2.5421E-27 4 40951 132.08 114.22 5 0.51454 0.63801 0 121260000 79927000 41332000 555 76 273 307 923;924;925;926 923 97 AVSTVVVTTAPSPK 14 1 0 Phospho (STY) _AVSTVVVTTAPS(ph)PK_ AVSTVVVT(0.001)T(0.013)APS(0.986)PK AVS(-93.67)T(-78.09)VVVT(-28.72)T(-18.9)APS(18.9)PK 0 0 1 0 A0A024R3K9;A0A024R3N2;Q6P4R8 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 718.8746 2 718.873457 1435.73236 71868.64 1.1365 0.00081701 -0.068908 -4.9536E-05 1.0676 0.00076747 718.873511918343 722.880423011319 79.77 0.98035 79.77 79.336 80.317 0 555 92 10 0 0 0 2.9601E-34 2 50912 147.12 120.45 5 1.4904 0.99617 0 165750000 68905000 96844000 556 76 273 307 927;928 928 97 AVTETSFNSVNVNGQR 16 0 1 Phospho (STY) _AVTETS(ph)FNSVNVNGQR_ AVT(0.033)ET(0.434)S(0.514)FNS(0.02)VNVNGQR AVT(-11.91)ET(-0.74)S(0.74)FNS(-14.13)VNVNGQR 0 0 1 0 B3KWI2;Q8IZT6 B3KWI2 B3KWI2 ASPM Abnormal spindle-like microcephaly-associated protein ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 902.409 2 901.907079 1801.79961 NaN NaN NaN 1.3498 0.0012174 NaN NaN NaN NaN 74.238 0.43137 74.238 73.862 74.293 0 0 0 0 8.6718E-05 1 37776 53.946 39.527 4 NaN NaN 0 9375000 9375000 0 557 606 274 308 929 929 995;2781 AVTETSFNSVNVNGQR 16 0 1 Phospho (STY) _AVTET(ph)SFNSVNVNGQR_ AVT(0.103)ET(0.518)S(0.371)FNS(0.007)VNVNGQR AVT(-6.99)ET(1.44)S(-1.44)FNS(-18.42)VNVNGQR 0 0 1 0 B3KWI2;Q8IZT6 B3KWI2 B3KWI2 ASPM Abnormal spindle-like microcephaly-associated protein MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 901.9084 2 901.907079 1801.79961 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.974 1 73.974 73.474 74.474 0 0 0 0 1.4652E-05 1 37815 66.533 48.43 4 558 606 274 308 930 930 995;2781 AVTETSFNSVNVNGQR 16 0 1 Phospho (STY) _AVTETS(ph)FNSVNVNGQR_ AVT(0.002)ET(0.131)S(0.859)FNS(0.007)VNVNGQR AVT(-25.92)ET(-8.17)S(8.17)FNS(-20.65)VNVNGQR 0 0 1 0 B3KWI2;Q8IZT6 B3KWI2 B3KWI2 ASPM Abnormal spindle-like microcephaly-associated protein MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 901.9059 2 901.907079 1801.79961 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.017 1 74.017 73.517 74.517 7.6294E-06 0 0 0 3.9722E-06 1 37843 84.753 57.424 4 559 606 274 308 931 931 995;2781 AVTETSFNSVNVNGQR 16 0 1 Phospho (STY) _AVTETS(ph)FNSVNVNGQR_ AVT(0.054)ET(0.188)S(0.748)FNS(0.011)VNVNGQR AVT(-11.46)ET(-6)S(6)FNS(-18.49)VNVNGQR 0 0 1 0 B3KWI2;Q8IZT6 B3KWI2 B3KWI2 ASPM Abnormal spindle-like microcephaly-associated protein MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 906.9139 2 901.907079 1801.79961 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.131 1 74.131 73.631 74.631 0 0 0 0 0.00010024 1 37925 60.196 43.943 4 560 606 274 308 932 932 995;2781 AVTIANSPSKPSEK 14 2 0 Phospho (STY) _AVTIANS(ph)PSKPSEK_ AVTIANS(0.897)PS(0.096)KPS(0.008)EK AVT(-34.58)IANS(9.72)PS(-9.72)KPS(-20.72)EK 0 0 1 1 Q8NEF9 Q8NEF9 Q8NEF9 SRFBP1 Serum response factor-binding protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 754.873 2 754.871446 1507.72834 70122.42 0.97473 0.00073579 -0.31203 -0.00023555 0.66269 0.00050025 754.871098661115 762.885578335497 25.668 0.3426 25.668 25.506 25.849 1.9073E-06 96 20 8 0 0 0 0.001967 1 11825 62.69 49.011 4 0.5157 0.41984 0 24475000 16263000 8212300 561 1160 275 309 933 933 2237 AVTIANSPSKPSEK 14 2 0 Phospho (STY) _AVTIANS(ph)PSKPSEK_ AVT(0.002)IANS(0.796)PS(0.172)KPS(0.031)EK AVT(-26.68)IANS(6.66)PS(-6.66)KPS(-14.13)EK 0 0 1 1 Q8NEF9 Q8NEF9 Q8NEF9 SRFBP1 Serum response factor-binding protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 503.9175 3 503.583389 1507.72834 85544.24 0.5511 0.00027753 -0.14689 -7.3972E-05 0.40421 0.00020355 503.583297126008 508.926069661889 25.665 0.32728 25.665 25.489 25.817 1.9073E-06 92 19 6 0 0 0 0.0010532 1 11872 54.974 42.997 4 0.57132 0.45434 0 31016000 19458000 11558000 562 1160 275 309 934 934 2237 AVVGVVAGGGR 11 0 1 Unmodified _AVVGVVAGGGR_ 0 0 0 0 E9PKZ0;P62917;E9PKU4;E9PP36 E9PKZ0 E9PKZ0 RPL8 60S ribosomal protein L8 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 471.2804 2 471.279983 940.545414 90440.09 0.57132 0.00026925 -0.12354 -5.822E-05 0.44779 0.00021103 471.279908549536 476.284027698942 39.215 0.44082 39.215 38.984 39.424 0 117 38 4 0 0 0 0.0066077 1 22572 74.127 46.603 1 0.91887 0.76304 0 5191500 3072400 2119100 563 811 276 310 935 935 AVVLPGGTATSPK 13 1 0 Phospho (STY) _AVVLPGGTATS(ph)PK_ AVVLPGGT(0.126)AT(0.035)S(0.84)PK AVVLPGGT(-8.25)AT(-13.81)S(8.25)PK 0 0 1 0 Q8N1G0;F8WCX2;H0Y5I5 Q8N1G0 Q8N1G0 ZNF687 Zinc finger protein 687 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 639.3294 2 639.328685 1276.64282 74802.23 0.89323 0.00057107 -0.024222 -1.5486E-05 0.86901 0.00055558 639.328658514544 643.33572448282 76.811 1.6277 76.811 75.971 77.598 0 768 139 8 0 0 0 2.0848E-14 3 40054 115.34 85.532 3 0.75324 0.93184 0 274970000 160080000 114900000 564 1150 277 311 936;937;938 938 2215 AVVMPLQLIQEQAASPNAEIHILK 24 1 0 Oxidation (M),Phospho (STY) _AVVM(ox)PLQLIQEQAAS(ph)PNAEIHILK_ AVVM(1)PLQLIQEQAASPNAEIHILK AVVMPLQLIQEQAAS(1)PNAEIHILK AVVM(53.68)PLQLIQEQAASPNAEIHILK AVVMPLQLIQEQAAS(53.68)PNAEIHILK 0 1 1 0 B7Z9T5;A0A024R632;Q14807;H3BRB3;Q14985;O60846;Q7LE35;I3L306 B7Z9T5 B7Z9T5 KIF22;OBP-2;A-328A3.5 Kinesin-like protein;Kinesin-like protein KIF22 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 904.1419 3 903.806356 2708.39724 64630.21 0.6966 0.00062959 0.19614 0.00017727 0.89274 0.00080686 904.14066755457 906.812640182721 132.02 1.2013 132.02 131.48 132.69 0 545 106 9 0 0 0 2.9891E-08 2 80513 53.679 53.679 1 1.0741 1.2836 0 13407000 5991200 7415500 565 116 278 312 939;940 939 23 168 AVVMPLQLIQEQAASPNAEIHILK 24 1 0 Oxidation (M),Phospho (STY) _AVVM(ox)PLQLIQEQAAS(ph)PNAEIHILK_ AVVM(1)PLQLIQEQAASPNAEIHILK AVVMPLQLIQEQAAS(1)PNAEIHILK AVVM(69.44)PLQLIQEQAASPNAEIHILK AVVMPLQLIQEQAAS(69.44)PNAEIHILK 0 1 1 0 B7Z9T5;A0A024R632;Q14807;H3BRB3;Q14985;O60846;Q7LE35;I3L306 B7Z9T5 B7Z9T5 KIF22;OBP-2;A-328A3.5 Kinesin-like protein;Kinesin-like protein KIF22 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 906.8124 3 903.806356 2708.39724 62466.54 1.0819 0.00097781 -2.2424 -0.0020267 -1.1606 -0.0010489 904.139484254025 906.81047336843 134.53 0.33952 134.53 134.43 134.77 0 120 14 12 0 0 0 4.0732E-13 2 86806 69.444 65.954 1 1.8114 1.1881 0 52383000 20293000 32091000 566 116 278 312 941;942 941 23 168 AWLDEDSNLSPSPLR 15 0 1 Phospho (STY) _AWLDEDSNLS(ph)PSPLR_ AWLDEDS(0.003)NLS(0.824)PS(0.174)PLR AWLDEDS(-25.05)NLS(6.75)PS(-6.75)PLR 0 0 1 0 B8ZZ93;B8ZZH7;F8WCL7;J3KQ70;B4DJ31;Q9C086 B8ZZ93 B8ZZ93 INO80B;INO80B-WBP1 INO80 complex subunit B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 890.4017 2 890.401099 1778.78764 65699.79 0.77122 0.0006867 0.035856 3.1927E-05 0.80708 0.00071862 890.401062527702 895.405390829867 114.19 0.58301 114.19 113.91 114.5 -7.6294E-06 117 50 4 0 0 0 2.4049E-05 1 67893 79.652 69.964 3 0.75267 0.88952 0 14308000 6015800 8291800 567 626 279 313 943 943 1032;1033;1034 AWLDEDSNLSPSPLR 15 0 1 2 Phospho (STY) _AWLDEDSNLS(ph)PS(ph)PLR_ AWLDEDS(0.016)NLS(0.984)PS(1)PLR AWLDEDS(-17.91)NLS(17.91)PS(33.51)PLR 0 0 2 0 B8ZZ93;B8ZZH7;F8WCL7;J3KQ70;B4DJ31;Q9C086 B8ZZ93 B8ZZ93 INO80B;INO80B-WBP1 INO80 complex subunit B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 930.8865 2 930.384264 1858.75397 63608.87 0.84126 0.0007827 0.48346 0.0004498 1.3247 0.0012325 930.385482669961 935.388546052853 118.8 0.63603 118.8 118.5 119.14 7.6294E-06 224 56 5 0 0 0 5.5675E-06 2 71263 81.619 71.932 3 0.61733 0.74175 0 18007000 11792000 6214600 568 626 279 314 944;945 945 1032;1033;1034 AWLDEDSNLSPSPLR 15 0 1 2 Phospho (STY) _AWLDEDS(ph)NLS(ph)PSPLR_ AWLDEDS(0.999)NLS(0.865)PS(0.136)PLR AWLDEDS(29.21)NLS(8.07)PS(-8.07)PLR 0 0 2 0 B8ZZ93;B8ZZH7;F8WCL7;J3KQ70;B4DJ31;Q9C086 B8ZZ93 B8ZZ93 INO80B;INO80B-WBP1 INO80 complex subunit B MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 935.3899 2 930.384264 1858.75397 NaN NaN NaN NaN NaN NaN NaN NaN NaN 123.03 1 123.03 122.53 123.53 0 0 0 0 0.00036097 1 74449 53.403 44.674 3 569 626 279 314 946 946 1032;1033;1034 AYDIAGSTK 9 1 0 Unmodified _AYDIAGSTK_ 0 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 463.2344 2 463.234907 924.455261 NaN NaN NaN NaN NaN NaN NaN NaN NaN 56.561 1 56.561 56.061 57.061 -3.8147E-06 0 0 0 0.015624 1 24572 50.04 19.855 1 570 962 280 315 947 947 AYDIAGSTK 9 1 0 Unmodified _AYDIAGSTK_ 0 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 467.242 2 463.234907 924.455261 NaN NaN NaN NaN NaN NaN NaN NaN NaN 56.725 1 56.725 56.225 57.225 3.8147E-06 0 0 0 0.028847 1 24691 43.442 22.817 1 571 962 280 315 948 948 AYILVTPLK 9 1 0 Phospho (STY) _AYILVT(ph)PLK_ AYILVT(1)PLK AY(-63.02)ILVT(63.02)PLK 0 0 1 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 549.3046 2 549.303951 1096.59335 NaN NaN NaN -2.0471 -0.0011245 NaN NaN NaN NaN 113.41 0.089233 113.41 113.36 113.45 0 0 0 0 0.0084516 1 67361 66.595 31.788 2 NaN NaN 0 2311700 2311700 0 572 1120 281 316 949 949 2953 AYILVTPLK 9 1 0 Phospho (STY) _AYILVT(ph)PLK_ AYILVT(1)PLK AY(-52.79)ILVT(52.79)PLK 0 0 1 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 549.3032 2 549.303951 1096.59335 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.29 1 113.29 112.79 113.79 0 0 0 0 0.022367 1 67291 56.359 35.839 2 573 1120 281 316 950 950 2953 AYSPTCSPTLGFK 13 1 0 2 Phospho (STY) _AYS(ph)PTCS(ph)PTLGFK_ AY(0.004)S(0.991)PT(0.083)CS(0.79)PT(0.132)LGFK AY(-24.65)S(23.17)PT(-10.03)CS(7.79)PT(-7.79)LGFK 0 0 2 0 Q5TGY3 Q5TGY3 Q5TGY3 AHDC1 AT-hook DNA-binding motif-containing protein 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 794.8118 2 794.811358 1587.60816 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.04 1 104.04 103.54 104.54 0 0 0 0 0.00024976 1 60178 61.167 33.486 10 574 1109 282 317 951 951 2098;2099 CDVRRCRCKEGR 12 1 4 Unmodified _CDVRRCRCKEGR_ 0 0 0 4 F5GX24;B4DL73;G3V483;Q7L622 F5GX24 F5GX24 G2E3 G2/M phase-specific E3 ubiquitin-protein ligase ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 850.4165 2 826.387942 1650.76133 NaN NaN NaN 3.8362 0.0031702 NaN NaN NaN NaN 106.98 0.31134 106.98 106.77 107.08 0 0 0 0 0.01286 1 62296 30.254 1.5275 1 NaN NaN 0 6499100 0 6499100 575 636 283 318 952 952 CGSGPVHISGQHLVAVEEDAESEDEEEEDVK 31 1 0 Phospho (STY) _CGSGPVHISGQHLVAVEEDAES(ph)EDEEEEDVK_ CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK CGS(-37.82)GPVHIS(-37.93)GQHLVAVEEDAES(37.82)EDEEEEDVK 0 0 1 0 A0A140VJQ2;A0A0S2Z4G7;A4ZU86;A0A0S2Z491;P06748;E5RI98;Q9NX34;Q9BTI9 A0A140VJQ2 A0A140VJQ2 NPM1 Nucleophosmin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 866.3673 4 865.86471 3459.42973 64121.29 0.76664 0.00066381 0.357 0.00030911 1.1236 0.00097292 866.11587290406 868.119495568885 93.702 1.7762 93.702 93.198 94.974 0 1318 167 12 0 0 0 6.0619E-12 1 60157 52.198 52.198 3 0.47016 0.31433 0 140040000 93250000 46787000 576 350 284 319 953 953 547 CGSGPVHISGQHLVAVEEDAESEDEEEEDVK 31 1 0 Phospho (STY) _CGSGPVHISGQHLVAVEEDAES(ph)EDEEEEDVK_ CGSGPVHISGQHLVAVEEDAES(0.999)EDEEEEDVK CGS(-36)GPVHIS(-36)GQHLVAVEEDAES(36)EDEEEEDVK 0 0 1 0 A0A140VJQ2;A0A0S2Z4G7;A4ZU86;A0A0S2Z491;P06748;E5RI98;Q9NX34;Q9BTI9 A0A140VJQ2 A0A140VJQ2 NPM1 Nucleophosmin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 866.1162 4 865.86471 3459.42973 64121.19 0.83868 0.00072619 -1.214 -0.0010511 -0.37528 -0.00032495 866.364817638265 868.117978872201 95.091 1.2062 95.091 94.573 95.779 0 564 115 8 0 0 0 3.2679E-11 1 61455 44.916 44.916 3 0.47341 0.30929 0 46763000 31069000 15694000 577 350 284 319 954 954 547 CLVAGLLSPR 10 0 1 Phospho (STY) _CLVAGLLS(ph)PR_ CLVAGLLS(1)PR CLVAGLLS(79.82)PR 0 0 1 0 Q8WYP5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 583.2945 2 583.293591 1164.57263 81279.01 0.66511 0.00038795 -0.16263 -9.4862E-05 0.50247 0.00029309 583.293553291113 588.297512346463 114.41 0.6898 114.41 114.04 114.73 7.6294E-06 166 62 4 0 0 0 0.0011383 1 67947 79.82 46.591 1 1.32 1.6022 0 20185000 8585300 11600000 578 1170 285 320 955 955 2283 CLVAGLLSPR 10 0 1 Phospho (STY) _CLVAGLLS(ph)PR_ CLVAGLLS(1)PR CLVAGLLS(96.55)PR 0 0 1 0 Q8WYP5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 588.2983 2 583.293591 1164.57263 79638.72 0.97732 0.00057006 -0.099746 -5.8181E-05 0.87757 0.00051188 583.293556956898 588.297686088966 120.62 1.1044 120.62 120.08 121.18 0 380 98 6 0 0 0 1.8539E-05 3 78094 96.551 51.704 1 2.6312 1.9929 0 19420000 6280000 13140000 579 1170 285 320 956;957;958 958 2283 CLVAGLLSPR 10 0 1 Phospho (STY) _CLVAGLLS(ph)PR_ CLVAGLLS(1)PR CLVAGLLS(45.08)PR 0 0 1 0 Q8WYP5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 583.2946 2 583.293591 1164.57263 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.12 1 121.12 120.62 121.62 0 0 0 0 0.01131 1 78261 45.077 9.1974 1 580 1170 285 320 959 959 2283 CRDPPSNPVAASPR 14 0 2 Phospho (STY) _CRDPPSNPVAAS(ph)PR_ CRDPPSNPVAAS(1)PR CRDPPS(-56.86)NPVAAS(56.86)PR 0 0 1 1 Q8ND82;Q9UJJ2 Q8ND82 Q8ND82 ZNF280C Zinc finger protein 280C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 535.5738 3 535.23974 1602.69739 83604.91 0.56638 0.00030315 -0.59941 -0.00032083 -0.033028 -1.7678E-05 535.573687711304 541.911668782374 60.008 0.39115 60.008 59.85 60.241 0 85 26 6 0 0 0 0.00054823 1 27145 67.645 55.491 2 0.6244 0.74744 0 14192000 7625100 6566700 581 1159 286 321 960 960 2234 CRDPPSNPVAASPR 14 0 2 Phospho (STY) _CRDPPSNPVAAS(ph)PR_ CRDPPSNPVAAS(1)PR CRDPPS(-52.76)NPVAAS(52.76)PR 0 0 1 1 Q8ND82;Q9UJJ2 Q8ND82 Q8ND82 ZNF280C Zinc finger protein 280C MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 535.24 3 535.23974 1602.69739 82163.97 0.74929 0.00040105 0.82927 0.00044386 1.5786 0.0008449 535.24009075276 541.912505528492 28.731 0.97769 28.731 28.153 29.131 -1.9073E-06 317 68 8 0 0 0 0.0007506 1 14514 65.47 54.365 2 1.5906 1.3746 0 24952000 9336400 15616000 582 1159 286 321 961 961 2234 CSASPPLRR 9 0 2 Phospho (STY) _CSAS(ph)PPLRR_ CSAS(1)PPLRR CS(-40.11)AS(40.11)PPLRR 0 0 1 1 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 562.2582 2 562.25754 1122.50053 76716.07 0.0023503 1.3215E-06 0.52381 0.00029451 0.52616 0.00029584 562.257918767504 572.266204052272 22.507 0.89708 22.507 22.031 22.928 0 259 48 8 0 0 0 0.0006377 1 9073 72.325 61.161 2 3.4839 3.0315 0 100660000 22438000 78220000 583 994;1130 287 322 962 962 1773 CSLSEPLESDEADLAK 16 1 0 Phospho (STY) _CSLSEPLES(ph)DEADLAK_ CSLS(0.005)EPLES(0.995)DEADLAK CS(-35.66)LS(-23.21)EPLES(23.21)DEADLAK 0 0 1 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 926.8972 2 922.386997 1842.75944 65041.48 1.0286 0.00094873 -0.41206 -0.00038008 0.61649 0.00056864 922.386258303519 926.394001022213 105.77 0.67313 105.77 105.44 106.11 0 263 64 6 0 0 0 0.0002644 1 68050 49.188 38.991 3 1.1504 0.88344 0 12100000 5679500 6420800 584 1035 288 323 963 963 1910 DADDAVYELDGK 12 1 0 Unmodified _DADDAVYELDGK_ 0 0 0 0 B4DJK0;B4DUA4;A0A024R6D8;Q59EK7;Q13243;G3V5K8;B5BUD8 B4DJK0 B4DJK0 SRSF5;SFRS5 Serine/arginine-rich splicing factor 5 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 659.7991 2 655.790972 1309.56739 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.099 1 75.099 74.599 75.599 0 0 0 0 0.0057016 1 38577 106.62 70.675 1 585 121 289 324 964 964 DADDAVYELDGK 12 1 0 Unmodified _DADDAVYELDGK_ 0 0 0 0 B4DJK0;B4DUA4;A0A024R6D8;Q59EK7;Q13243;G3V5K8;B5BUD8 B4DJK0 B4DJK0 SRSF5;SFRS5 Serine/arginine-rich splicing factor 5 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 655.7911 2 655.790972 1309.56739 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.991 1 67.991 67.491 68.491 0 0 0 0 0.00877 1 42640 45.661 25.332 1 586 121 289 324 965 965 DADDAVYELNGK 12 1 0 Unmodified _DADDAVYELNGK_ 0 0 0 0 V9HVZ0;A8K588;Q13247;Q59GY3;A0A0D9SEM4;Q53F45;B4DEM8;B5BU15;A8K644;Q08170 V9HVZ0;A8K644 V9HVZ0 HEL-S-91;SRSF6;SRSF4;SFRS6;SFRS4 Serine/arginine-rich splicing factor 6;Serine/arginine-rich splicing factor 4 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 659.3059 2 655.298964 1308.58338 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.231 1 75.231 74.731 75.731 0 0 0 0 0.0054974 1 38669 90.827 70.498 1 587 474;478 290 325 966 966 DADDAVYELNGK 12 1 0 Unmodified _DADDAVYELNGK_ 0 0 0 0 V9HVZ0;A8K588;Q13247;Q59GY3;A0A0D9SEM4;Q53F45;B4DEM8;B5BU15;A8K644;Q08170 V9HVZ0;A8K644 V9HVZ0 HEL-S-91;SRSF6;SRSF4;SFRS6;SFRS4 Serine/arginine-rich splicing factor 6;Serine/arginine-rich splicing factor 4 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 654.8131 2 655.298964 1308.58338 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.653 1 75.653 75.153 76.153 0 0 0 0 0.0017621 1 39004 55.401 26.674 1 588 474;478 290 325 967 967 DADLSPVNASIIK 13 1 0 Phospho (STY) _DADLS(ph)PVNASIIK_ DADLS(1)PVNASIIK DADLS(62.62)PVNAS(-62.62)IIK 0 0 1 0 F5H1U9;O75970 F5H1U9 F5H1U9 MPDZ Multiple PDZ domain protein ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 715.8546 2 711.847439 1421.68033 NaN NaN NaN -0.050364 -3.5851E-05 NaN NaN NaN NaN 105.67 0.78477 105.67 105.32 106.11 0 0 0 0 1.8516E-24 1 61376 122.78 100.7 2 NaN NaN 0 12585000 0 12585000 589 827 291 326 968 968 1421 DADLSPVNASIIK 13 1 0 Phospho (STY) _DADLS(ph)PVNASIIK_ DADLS(0.994)PVNAS(0.006)IIK DADLS(22.55)PVNAS(-22.55)IIK 0 0 1 0 F5H1U9;O75970 F5H1U9 F5H1U9 MPDZ Multiple PDZ domain protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 711.8479 2 711.847439 1421.68033 71785.33 1.1698 0.00083274 -0.36604 -0.00026057 0.80378 0.00057217 711.846394661613 715.854554921639 112.47 0.71092 112.47 112.11 112.82 0 273 70 6 0 0 0 0.0052713 2 72374 53.038 41.874 2 1.354 1.051 0 12855000 5286000 7568800 590 827 291 326 969;970 970 1421 DADSSISVLEIHSQK 15 1 0 Unmodified _DADSSISVLEIHSQK_ 0 0 0 0 Q96T23;H0YER1;H0YCN2 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 815.3476 2 814.909941 1627.80533 NaN NaN NaN -0.30622 -0.00024954 NaN NaN NaN NaN 100.68 0.50013 100.68 100.33 100.83 -7.6294E-06 0 0 0 0.0087361 1 57563 40.516 30.861 1 NaN NaN 0 8702800 8702800 0 591 1188 292 327 971 971 DAEDALHNLDR 11 0 1 Unmodified _DAEDALHNLDR_ 0 0 0 0 Q5JRI1;Q53GD7;A0A0S2Z504;O75494 Q5JRI1 Q5JRI1 SRSF10 Serine/arginine-rich splicing factor 10 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 634.7967 2 634.796923 1267.57929 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.43 1 84.43 83.93 84.93 0 0 0 0 0.0065862 1 45446 97.734 70.43 1 592 357 293 328 972 972 DAEDALHNLDR 11 0 1 Unmodified _DAEDALHNLDR_ 0 0 0 0 Q5JRI1;Q53GD7;A0A0S2Z504;O75494 Q5JRI1 Q5JRI1 SRSF10 Serine/arginine-rich splicing factor 10 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 634.7975 2 634.796923 1267.57929 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.582 1 84.582 84.082 85.082 -7.6294E-06 0 0 0 0.00061867 1 45554 83.862 59.832 1 593 357 293 328 973 973 DAEDALHNLDRK 12 1 1 Unmodified _DAEDALHNLDRK_ 0 0 0 1 Q5JRI1;Q53GD7;A0A0S2Z504;O75494 Q5JRI1 Q5JRI1 SRSF10 Serine/arginine-rich splicing factor 10 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 466.912 3 466.232028 1395.67426 88407.2 0.56882 0.0002652 1.2475 0.00058162 1.8163 0.00084682 466.232094920545 472.240569048402 95.599 0.59495 95.599 95.4 95.995 0 220 54 7 0 0 0 5.7895E-06 1 53747 82.85 68.887 1 1.1596 1.3817 0 84693000 33864000 50828000 594 357 294 329 974 974 DAEDAMDAMDGAVLDGR 17 0 1 2 Oxidation (M) _DAEDAM(ox)DAM(ox)DGAVLDGR_ DAEDAM(1)DAM(1)DGAVLDGR DAEDAM(56.12)DAM(56.12)DGAVLDGR 0 2 0 0 Q8NAK9;B3KUY1;A0A024R8U5;Q01130;Q53FN0;J3QL05;J3KP15 Q8NAK9 Q8NAK9 SFRS2;SRSF2 Serine/arginine-rich splicing factor 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 897.3636 2 892.359098 1782.70364 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.332 1 65.332 64.832 65.832 0 0 0 0 0.00014517 1 31418 56.122 49.463 1 595 156 295 330 975 975 33;34 DAEYIYPSLESDDDDPALK 19 1 0 Phospho (STY) _DAEYIY(ph)PSLESDDDDPALK_ DAEY(0.001)IY(0.38)PS(0.31)LES(0.31)DDDDPALK DAEY(-27.24)IY(0.89)PS(-0.89)LES(-0.89)DDDDPALK 0 0 1 0 Q9UPP1;H0Y3N9;H0Y589 Q9UPP1 Q9UPP1 PHF8 Histone lysine demethylase PHF8 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1122.9728 2 1118.46449 2234.91442 NaN NaN NaN -0.13671 -0.00015291 NaN NaN NaN NaN 114.27 0.62814 114.27 113.9 114.53 7.6294E-06 0 0 0 0.00073665 1 67853 40.113 27.133 4 NaN NaN 0 30697000 0 30697000 596 1243 296 331 976 976 2547;2548;3025 DAEYIYPSLESDDDDPALK 19 1 0 Phospho (STY) _DAEYIYPS(ph)LESDDDDPALK_ DAEY(0.001)IY(0.029)PS(0.485)LES(0.485)DDDDPALK DAEY(-29.4)IY(-12.22)PS(0)LES(0)DDDDPALK 0 0 1 0 Q9UPP1;H0Y3N9;H0Y589 Q9UPP1 Q9UPP1 PHF8 Histone lysine demethylase PHF8 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1118.9644 2 1118.46449 2234.91442 NaN NaN NaN -2.5924 -0.0028996 NaN NaN NaN NaN 114.24 0.67204 114.24 113.89 114.56 0 0 0 0 0.0013683 2 68081 42.277 28.371 4 NaN NaN 0 66708000 66708000 0 597 1243 296 331 977;978 977 2547;2548;3025 DAEYIYPSLESDDDDPALK 19 1 0 Phospho (STY) _DAEYIYPSLES(ph)DDDDPALK_ DAEYIY(0.001)PS(0.018)LES(0.981)DDDDPALK DAEY(-54.26)IY(-32.24)PS(-17.37)LES(17.37)DDDDPALK 0 0 1 0 Q9UPP1;H0Y3N9;H0Y589 Q9UPP1 Q9UPP1 PHF8 Histone lysine demethylase PHF8 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1122.973 2 1118.46449 2234.91442 57918.71 0.72241 0.00080798 -0.19294 -0.0002158 0.52946 0.00059218 1118.4638573655 1122.97286743518 122.33 0.81982 122.33 122.06 122.88 0 525 77 10 0 0 0 9.1132E-10 1 79026 74.543 56.407 4 1.3746 0.91746 0 113550000 45898000 67656000 598 1243 296 331 979 979 2547;2548;3025 DAGLLVEQPPLAGVAASPR 19 0 1 Phospho (STY) _DAGLLVEQPPLAGVAAS(ph)PR_ DAGLLVEQPPLAGVAAS(1)PR DAGLLVEQPPLAGVAAS(58.98)PR 0 0 1 0 Q13469 Q13469 Q13469 NFATC2 Nuclear factor of activated T-cells, cytoplasmic 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 971.498 2 970.995698 1939.97684 63707.31 0.5971 0.00057978 0.21135 0.00020522 0.80845 0.00078501 970.995836334328 976.000507436292 122.61 0.52753 122.61 122.28 122.8 0 140 37 6 0 0 0 6.5833E-07 2 74010 58.98 58.98 1 0.15267 0.17283 0 10837000 8157700 2679500 599 1051 297 332 980;981 980 1959 DAHLLVESK 9 1 0 Unmodified _DAHLLVESK_ 0 0 0 0 E5KNY5;P42704;B4DSR0 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 510.2843 2 506.277106 1010.53966 NaN NaN NaN -0.40984 -0.00020749 NaN NaN NaN NaN 79.982 0.27989 79.982 79.758 80.038 0 0 0 0 1.3175E-23 1 42285 123.35 73.228 1 NaN NaN 0 7301600 0 7301600 600 783 298 333 982 982 DAHSIHGTNPQYLVEK 16 1 0 Unmodified _DAHSIHGTNPQYLVEK_ 0 0 0 0 B2RDP2;Q8NAV1 B2RDP2 B2RDP2 PRPF38A Pre-mRNA-splicing factor 38A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 603.6368 3 603.635714 1807.88531 78754.5 0.91274 0.00055096 -0.39957 -0.0002412 0.51317 0.00030977 603.969799777091 606.307084942221 107.74 0.64682 107.74 107.33 107.98 0 208 48 8 0 0 0 1.2879E-09 2 62865 86.548 75.492 1 1.3519 1.7001 0 28842000 14362000 14480000 601 555 299 334 983;984 984 DALDLSDINSEPPR 14 0 1 Phospho (STY) _DALDLS(ph)DINSEPPR_ DALDLS(0.994)DINS(0.006)EPPR DALDLS(21.95)DINS(-21.95)EPPR 0 0 1 0 Q0IJ49;Q99640 Q0IJ49 Q0IJ49 PKMYT1 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 811.3615 2 811.358899 1620.70325 NaN NaN NaN NaN NaN NaN NaN NaN NaN 107.27 1 107.27 106.77 107.77 -7.6294E-06 0 0 0 0.0011644 1 62579 89.911 62.941 2 602 1043 300 335 985 985 1944 DALGDSLQVPVSPSSTTSSR 20 0 1 Phospho (STY) _DALGDSLQVPVS(ph)PSSTTSSR_ DALGDS(0.001)LQVPVS(0.51)PS(0.082)S(0.082)T(0.082)T(0.082)S(0.082)S(0.082)R DALGDS(-28.02)LQVPVS(7.96)PS(-7.96)S(-7.96)T(-7.96)T(-7.96)S(-7.96)S(-7.96)R 0 0 1 0 C9JVY5;A0A024R167;B4E2K2;A0A024R152;Q9Y2D5 C9JVY5 C9JVY5 AKAP2;hCG_28765 A-kinase anchor protein 2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1047.483 2 1042.48081 2082.94706 NaN NaN NaN -0.32279 -0.0003365 NaN NaN NaN NaN 104.61 0.66605 104.61 104.26 104.93 0 0 0 0 0.0010528 1 60434 41.644 19.412 8 NaN NaN 0 10273000 0 10273000 603 38 301 336 986 986 45 DAPAGSPPASPGPQGPSTK 19 1 0 Phospho (STY) _DAPAGS(ph)PPASPGPQGPSTK_ DAPAGS(1)PPASPGPQGPSTK DAPAGS(34.79)PPAS(-34.79)PGPQGPS(-44.15)T(-44.15)K 0 0 1 0 A0A024R7D8;Q8TEP0;A0A0A0MRX4;Q3MIN7 A0A024R7D8 A0A024R7D8 RGL3;FLJ00153 Ral guanine nucleotide dissociation stimulator-like 3 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 904.4122 2 899.904005 1797.79346 NaN NaN NaN -0.34338 -0.00030901 NaN NaN NaN NaN 46.91 0.36859 46.91 46.755 47.123 3.8147E-06 0 0 0 3.2161E-05 1 18014 49.049 36.171 4 NaN NaN 0 2423000 0 2423000 604 132 302 337 987 987 197 DAPQDFHPDR 10 0 1 Unmodified _DAPQDFHPDR_ 0 0 0 0 Q5HY54;Q60FE6;Q60FE5;P21333;A6NDY9;A0A087WWY3 Q5HY54 Q5HY54 FLNA Filamin-A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 604.2723 2 599.267801 1196.52105 76932.39 0.72006 0.00043151 1.1929 0.00071489 1.913 0.0011464 599.267924185842 604.272635460889 64.808 0.42242 64.808 64.576 64.998 0 155 30 7 0 0 0 0.026148 1 30854 54.539 36.631 1 2.3141 2.921 0 84369000 24829000 59540000 605 973 303 338 988 988 DAPQDFHPDR 10 0 1 Unmodified _DAPQDFHPDR_ 0 0 0 0 Q5HY54;Q60FE6;Q60FE5;P21333;A6NDY9;A0A087WWY3 Q5HY54 Q5HY54 FLNA Filamin-A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 403.1842 3 399.847626 1196.52105 94921.73 -0.37531 -0.00015007 0.98007 0.00039188 0.60476 0.00024181 399.847784296888 403.184171501971 64.793 0.33652 64.793 64.602 64.939 0 109 24 6 0 0 0 0.0052431 1 30922 50.284 39.76 1 2.0372 2.5665 0 56150000 21911000 34240000 606 973 303 338 989 989 DAPSLEEVEGHVADGSATEMGTTK 24 1 0 Oxidation (M),Phospho (STY) _DAPS(ph)LEEVEGHVADGSATEM(ox)GTTK_ DAPSLEEVEGHVADGSATEM(1)GTTK DAPS(1)LEEVEGHVADGSATEMGTTK DAPSLEEVEGHVADGSATEM(98)GTTK DAPS(65.49)LEEVEGHVADGS(-65.49)AT(-69.52)EMGT(-77.13)T(-76.7)K 0 1 1 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 846.0291 3 843.022912 2526.04691 66493.23 0.74363 0.0006269 -0.24328 -0.00020509 0.50036 0.00042181 843.357082096225 846.028462022611 86.478 1.2779 86.478 85.826 87.103 7.6294E-06 690 121 8 0 0 0 8.0562E-25 2 46910 98.002 98.002 5 0.96325 1.1998 0 74011000 39756000 34255000 607 464 304 339 990;991 990 122 800;801;2736;2737;2738 DAPSLEEVEGHVADGSATEMGTTK 24 1 0 Oxidation (M),Phospho (STY) _DAPSLEEVEGHVADGS(ph)ATEM(ox)GTTK_ DAPSLEEVEGHVADGSATEM(1)GTTK DAPSLEEVEGHVADGS(0.901)AT(0.099)EMGTTK DAPSLEEVEGHVADGSATEM(209)GTTK DAPS(-160.7)LEEVEGHVADGS(9.6)AT(-9.6)EMGT(-36.22)T(-43.27)K 0 1 1 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 846.0297 3 843.022912 2526.04691 65886.05 1.0108 0.00085216 -0.18387 -0.00015501 0.82696 0.00069715 843.357200189811 846.028485948103 89.779 1.6477 89.779 89.237 90.885 7.6294E-06 1389 144 12 0 0 0 3.6311E-162 4 49611 209 209 5 0.84459 1.0419 0 1006900000 564940000 441960000 608 464 304 339 992;993;994;995 995 122 800;801;2736;2737;2738 DAPSLEEVEGHVADGSATEMGTTK 24 1 0 Oxidation (M),Phospho (STY) _DAPS(ph)LEEVEGHVADGSATEM(ox)GTTK_ DAPSLEEVEGHVADGSATEM(1)GTTK DAPS(0.999)LEEVEGHVADGSATEMGTTK DAPSLEEVEGHVADGSATEM(43.79)GTTK DAPS(35.71)LEEVEGHVADGS(-35.71)AT(-37.72)EMGT(-37.22)T(-37.07)K 0 1 1 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 846.0286 3 843.022912 2526.04691 65747.66 1.1568 0.00097525 -0.462 -0.00038947 0.69485 0.00058577 843.357129622671 845.693870543685 88.8 1.1332 88.8 88.175 89.308 0 793 110 10 0 0 0 1.5437E-05 1 57030 43.795 43.795 5 1.5499 1.0306 0 89913000 34016000 55896000 609 464 304 339 996 996 122 800;801;2736;2737;2738 DAPSLEEVEGHVADGSATEMGTTK 24 1 0 Oxidation (M) _DAPSLEEVEGHVADGSATEM(ox)GTTK_ DAPSLEEVEGHVADGSATEM(1)GTTK DAPSLEEVEGHVADGSATEM(41.42)GTTK 0 1 0 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 819.3693 3 816.367469 2446.08058 67139.74 1.1705 0.00095554 -0.12562 -0.00010255 1.0449 0.00085299 816.701882343366 819.372684254519 92.622 0.91592 92.622 92.139 93.055 0 277 81 8 0 0 0 6.3557E-06 1 51710 41.423 41.423 1 1.0972 1.3925 0 39193000 15283000 23910000 610 464 304 340 997 997 122 DAPSLEEVEGHVADGSATEMGTTK 24 1 0 Phospho (STY) _DAPSLEEVEGHVADGS(ph)ATEMGTTK_ DAPS(0.002)LEEVEGHVADGS(0.466)AT(0.466)EMGT(0.03)T(0.036)K DAPS(-23.28)LEEVEGHVADGS(0)AT(0)EMGT(-11.88)T(-11.15)K 0 0 1 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 840.6981 3 837.691274 2510.05199 66767.21 1.0595 0.00088753 -0.34919 -0.00029251 0.71031 0.00059502 838.025520944077 840.696893615081 103.3 0.91361 103.3 102.86 103.77 0 791 88 13 0 0 0 1.3234E-06 1 66330 44.015 36.482 5 1.5861 1.0585 0 112540000 46463000 66073000 611 464 304 341 998 998 800;801;2736;2737;2738 DAPSLEEVEGHVADGSATEMGTTKK 25 2 0 Oxidation (M),Phospho (STY) _DAPSLEEVEGHVADGSATEM(ox)GT(ph)TKK_ DAPSLEEVEGHVADGSATEM(1)GTTKK DAPSLEEVEGHVADGS(0.163)AT(0.242)EMGT(0.298)T(0.298)KK DAPSLEEVEGHVADGSATEM(53.09)GTTKK DAPS(-45.72)LEEVEGHVADGS(-2.63)AT(-0.89)EMGT(0)T(0)KK 0 1 1 1 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 886.0576 3 885.721234 2654.14187 63109.61 1.103 0.00097691 -0.19152 -0.00016963 0.91144 0.00080728 886.055907959082 891.398443561828 80.837 1.515 80.837 80.022 81.537 7.6294E-06 1125 141 11 0 0 0 5.3266E-10 1 51950 53.091 42.116 5 1.1557 0.85992 0 149430000 72087000 77339000 612 464 305 342 999 999 122 800;801;2736;2737;2738 DAPSLEEVEGHVADGSATEMGTTKK 25 2 0 Phospho (STY) _DAPSLEEVEGHVADGSAT(ph)EMGTTKK_ DAPSLEEVEGHVADGS(0.214)AT(0.263)EMGT(0.262)T(0.262)KK DAPS(-44.47)LEEVEGHVADGS(-0.89)AT(0.02)EMGT(-0.02)T(-0.02)KK 0 0 1 1 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 886.0679 3 880.389595 2638.14696 63176.06 0.91073 0.0008018 0.17097 0.00015052 1.0817 0.00095232 880.723894243949 885.732728891523 92.485 0.69931 92.485 92.184 92.884 0 333 68 9 0 0 0 3.6653E-10 2 59638 53.091 53.091 5 1.7158 1.4085 0 22498000 6289500 16209000 613 464 305 343 1000;1001 1000 800;801;2736;2737;2738 DAQDVQASQAEADQQQTR 18 0 1 Unmodified _DAQDVQASQAEADQQQTR_ 0 0 0 0 A1A5C4;A0A087WVV2;A0A0A0MRV0;A7BI36;Q9P2E9;F8W7S5;A1A5C5 A1A5C4 A1A5C4 RRBP1 Ribosome-binding protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 994.9494 2 994.948846 1987.88314 62015.46 -0.26776 -0.00026641 1.1862 0.0011802 0.91843 0.00091379 994.949900583173 999.954563424257 23.532 0.30107 23.532 23.378 23.679 1.9073E-06 64 16 6 0 0 0 0.0028666 1 10037 38.399 31.034 1 0.75123 0.59968 0 8937700 5442000 3495700 614 256 306 344 1002 1002 DAQQVEPEGQEKPSPATVR 19 1 1 Phospho (STY) _DAQQVEPEGQEKPS(ph)PATVR_ DAQQVEPEGQEKPS(0.812)PAT(0.188)VR DAQQVEPEGQEKPS(6.36)PAT(-6.36)VR 0 0 1 1 H7C5N8;E7EPN9;Q9Y520 H7C5N8 H7C5N8 PRRC2C Protein PRRC2C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 722.007 3 715.99859 2144.97394 72026.11 0.59909 0.00042895 1.1291 0.00080845 1.7282 0.0012374 716.334071304893 722.00693258746 54.951 0.72044 54.951 54.624 55.344 3.8147E-06 356 56 9 0 0 0 2.1161E-05 2 23332 49.593 41.405 2 1.271 1.4975 0 43342000 19283000 24059000 615 789 307 345 1003;1004 1004 1330 DAQRLSPIPEEVPK 14 1 1 Phospho (STY) _DAQRLS(ph)PIPEEVPK_ DAQRLS(1)PIPEEVPK DAQRLS(110.38)PIPEEVPK 0 0 1 1 Q96T23;H0YER1;H0YCN2 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 829.912 2 829.911102 1657.80765 67764.34 1.2248 0.0010165 -0.080499 -6.6807E-05 1.1443 0.00094966 830.412615279528 838.922190463144 90.468 1.5078 90.468 89.663 91.171 0 639 134 9 0 0 0 1.7403E-17 3 49647 110.38 95.965 1 0.47922 0.58302 0 420150000 295060000 125090000 616 1188 308 346 1005;1006;1007 1006 2340 DAQRLSPIPEEVPK 14 1 1 Phospho (STY) _DAQRLS(ph)PIPEEVPK_ DAQRLS(1)PIPEEVPK DAQRLS(68.82)PIPEEVPK 0 0 1 1 Q96T23;H0YER1;H0YCN2 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 553.611 3 553.609827 1657.80765 80054.57 1.0751 0.00059516 -0.32959 -0.00018246 0.74546 0.0004127 553.609735795285 559.617056823378 90.423 1.6973 90.423 89.615 91.312 7.6294E-06 962 150 9 0 0 0 0.00043897 2 49846 68.82 55.683 1 0.46004 0.56126 0 521950000 342060000 179900000 617 1188 308 346 1008;1009 1008 2340 DAQRLSPIPEEVPK 14 1 1 Phospho (STY) _DAQRLS(ph)PIPEEVPK_ DAQRLS(1)PIPEEVPK DAQRLS(123.02)PIPEEVPK 0 0 1 1 Q96T23;H0YER1;H0YCN2 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 838.9226 2 829.911102 1657.80765 66617.31 1.084 0.00089959 -0.1528 -0.00012681 0.93116 0.00077278 829.910912041702 838.922227688028 87.937 1.9553 87.937 86.9 88.856 0 1237 187 8 0 0 0 2.9691E-23 3 56189 123.02 98.68 1 1.188 0.9178 0 157600000 69403000 88201000 618 1188 308 346 1010;1011;1012 1010 2340 DAQRLSPIPEEVPK 14 1 1 Phospho (STY) _DAQRLS(ph)PIPEEVPK_ DAQRLS(1)PIPEEVPK DAQRLS(40.84)PIPEEVPK 0 0 1 1 Q96T23;H0YER1;H0YCN2 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 553.6106 3 553.609827 1657.80765 79729.8 0.86504 0.00047889 -0.075081 -4.1566E-05 0.78995 0.00043733 553.609857227984 559.617262400952 87.914 2.2969 87.914 86.817 89.114 0 1447 221 9 0 0 0 0.0020947 1 56477 40.844 27.44 1 1.1592 0.89609 0 220100000 102140000 117970000 619 1188 308 346 1013 1013 2340 DARSPSPAHIVSNK 14 1 1 2 Phospho (STY) _DARS(ph)PS(ph)PAHIVSNK_ DARS(1)PS(1)PAHIVSNK DARS(50.79)PS(43.26)PAHIVS(-43.26)NK 0 0 2 1 E2GH18;Q5VVR7;C6ZRK1;E2GH15;E2GH13;E2GH16;C6ZRJ7;C6ZRK4;C6ZRJ5;C6ZRK5;A0A0D9SGH8;Q6FHW4;E2GH23;B5BU30;E2GH26;Q9NQB0 E2GH18 E2GH18 TCF7L2 Transcription factor 7-like 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 546.9064 3 546.906077 1637.6964 82175.61 0.54783 0.00029961 -0.25474 -0.00013932 0.29308 0.00016029 546.906098398848 552.912688292179 59.43 0.81715 59.43 59.158 59.975 0 268 63 7 0 0 0 0.0011587 1 26676 57.41 52.131 3 0.72088 0.8361 0 28402000 17226000 11175000 620 336 309 347 1014 1014 529;530 DARSPSPAHIVSNK 14 1 1 2 Phospho (STY) _DARS(ph)PS(ph)PAHIVSNK_ DARS(1)PS(0.998)PAHIVS(0.002)NK DARS(38.64)PS(27.04)PAHIVS(-27.04)NK 0 0 2 1 E2GH18;Q5VVR7;C6ZRK1;E2GH15;E2GH13;E2GH16;C6ZRJ7;C6ZRK4;C6ZRJ5;C6ZRK5;A0A0D9SGH8;Q6FHW4;E2GH23;B5BU30;E2GH26;Q9NQB0 E2GH18 E2GH18 TCF7L2 Transcription factor 7-like 2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 819.857 2 819.855477 1637.6964 NaN NaN NaN -0.11677 -9.5736E-05 NaN NaN NaN NaN 59.493 0.29182 59.493 59.274 59.566 0 0 0 0 0.0057366 1 26678 42.314 27.049 3 NaN NaN 0 3836600 3836600 0 621 336 309 347 1015 1015 529;530 DASGDGELDLSGIDDLEIDR 20 0 1 Phospho (STY) _DASGDGELDLS(ph)GIDDLEIDR_ DASGDGELDLS(1)GIDDLEIDR DAS(-72.14)GDGELDLS(72.14)GIDDLEIDR 0 0 1 0 A0A024R6P8;Q92994 A0A024R6P8 A0A024R6P8 BRF1 Transcription factor IIIB 90 kDa subunit MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1092.9636 2 1092.96264 2183.91073 58321.02 0.43311 0.00047337 0.10076 0.00011013 0.53387 0.0005835 1093.46426395257 1098.46779991202 130.2 0.65726 130.2 129.87 130.52 0 357 61 9 0 0 0 4.7986E-29 1 79082 117.26 106.65 2 0.36976 0.4549 0 24477000 17234000 7242700 622 125 310 348 1016 1016 187 DASLVTNEDHQR 12 0 1 Unmodified _DASLVTNEDHQR_ 0 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 698.2772 2 692.826212 1383.63787 75048.82 0.77619 0.00053776 -0.016974 -1.176E-05 0.75921 0.000526 692.826114614832 697.830580955415 64.315 0.36722 64.315 64.169 64.536 -7.6294E-06 63 25 4 0 0 0 5.6051E-11 1 30611 98.04 76.577 1 1.014 1.1792 0 12818000 6219800 6597900 623 999 311 349 1017 1017 DASLVTNEDHQR 12 0 1 Phospho (STY) _DAS(ph)LVTNEDHQR_ DAS(1)LVTNEDHQR DAS(44.54)LVT(-44.54)NEDHQR 0 0 1 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 737.8138 2 732.809377 1463.6042 72339.8 0.89689 0.00065725 -0.48197 -0.0003532 0.41491 0.00030405 732.808864064656 737.813433915791 29.088 0.40471 29.088 28.895 29.3 0 94 26 5 0 0 0 0.00054655 1 14813 82.069 68.299 2 1.9518 1.54 0 13882000 4526800 9355600 624 999 311 350 1018 1018 1808 DASSTYSQVENLNR 14 0 1 Unmodified _DASSTYSQVENLNR_ 0 0 0 0 A0A140VJD0;Q9UFC0;Q59FT0;H7C5S6 A0A140VJD0 A0A140VJD0 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 797.3724 2 792.368441 1582.72233 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.797 1 65.797 65.297 66.297 0 0 0 0 0.026455 1 41108 37.426 26.32 1 625 375 312 351 1019 1019 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 571.7821 2 567.774928 1133.5353 79864.05 0.47716 0.00027092 -0.17954 -0.00010194 0.29761 0.00016898 567.774670175756 571.781970309092 58.813 1.1226 58.813 58.152 59.274 0 513 88 8 0 0 0 1.4808E-05 3 25910 107.69 86.393 1 0.70265 0.87112 0 123880000 75045000 48833000 626 528 313 352 1020;1021;1022 1020 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 381.5237 3 378.852377 1133.5353 98368.7 -0.038169 -1.446E-05 -0.15521 -5.8801E-05 -0.19338 -7.3261E-05 378.852242966956 381.523650312673 62.134 0.37619 62.134 61.928 62.304 0 89 25 5 0 0 0 0.022842 1 28958 24.291 21.44 1 0.74756 0.94739 0 33344000 19806000 13538000 627 528 313 352 1023 1023 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 378.8522 3 378.852377 1133.5353 98675.12 0.080046 3.0326E-05 -0.28705 -0.00010875 -0.207 -7.8422E-05 378.852168509584 381.858039863907 63.728 0.28337 63.728 63.598 63.881 0 43 21 4 0 0 0 0.011072 1 30081 39.148 31.223 1 0.25005 0.29938 0 14061000 10264000 3796600 628 528 313 352 1024 1024 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 567.7744 2 567.774928 1133.5353 81351.07 0.49894 0.00028329 -0.090363 -5.1306E-05 0.40858 0.00023198 567.774650696126 571.782186197084 70.016 0.88265 70.016 69.511 70.394 -7.6294E-06 261 86 4 0 0 0 0.0028042 1 34691 80.787 63.423 1 0.60626 0.75869 0 26757000 16808000 9948900 629 528 313 352 1025 1025 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 567.7748 2 567.774928 1133.5353 81351.09 0.42921 0.0002437 0.15885 9.0189E-05 0.58806 0.00033388 567.774608936934 571.782074543337 71.325 0.69771 71.325 71.176 71.873 0 133 63 4 0 0 0 0.00049536 1 35716 98.582 76.09 1 0.73203 0.88856 0 17747000 10733000 7014000 630 528 313 352 1026 1026 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 567.7751 2 567.774928 1133.5353 80836.98 0.46703 0.00026517 0.32466 0.00018433 0.79169 0.0004495 567.774716055912 571.782497146718 71.923 0.1789 71.923 71.851 72.03 0 37 16 4 0 0 0 0.025724 1 36279 70.256 50.552 1 0.60725 0.72772 0 14395000 8151800 6243700 631 528 313 352 1027 1027 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 571.782 2 567.774928 1133.5353 80521.83 0.43342 0.00024608 0.04181 2.3739E-05 0.47523 0.00026982 567.774877729534 571.782143970584 74.044 2.9424 74.044 72.673 75.615 0 794 256 6 0 0 0 5.5323E-07 4 37857 124.23 98.494 1 0.69467 0.86428 0 78974000 47536000 31438000 632 528 313 352 1028;1029;1030;1031 1029 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 571.7827 2 567.774928 1133.5353 NaN NaN NaN -1.8269 -0.0010373 NaN NaN NaN NaN 62.989 3.8157 62.989 61.718 65.534 0 0 0 0 1.2783E-31 5 28773 130.75 75.072 1 NaN NaN 0 2975300000 0 2975300000 633 528 313 352 1032;1033;1034;1035;1036 1032 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 378.8525 3 378.852377 1133.5353 NaN NaN NaN -0.42341 -0.00016041 NaN NaN NaN NaN 62.989 0.34627 62.989 62.889 63.236 0 0 0 0 0.0065508 1 29515 58.37 50.445 1 NaN NaN 0 21498000 21498000 0 634 528 313 352 1037 1037 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 567.7749 2 567.774928 1133.5353 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.336 1 57.336 56.836 57.836 -3.8147E-06 0 0 0 0.0071847 1 25111 57.59 45.543 1 635 528 313 352 1038 1038 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 381.5237 3 378.852377 1133.5353 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.95 1 62.95 62.45 63.45 0 0 0 0 0.031085 1 29534 48.44 33.296 1 636 528 313 352 1039 1039 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 567.7742 2 567.774928 1133.5353 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.864 1 67.864 67.364 68.364 0 0 0 0 0.0044341 1 33484 64.485 48.282 1 637 528 313 352 1040 1040 DAVTYTEHAK 10 1 0 Unmodified _DAVTYTEHAK_ 0 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 567.7745 2 567.774928 1133.5353 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.413 1 70.413 69.913 70.913 0 0 0 0 0.00033684 1 35196 88.136 64.368 1 638 528 313 352 1041 1041 DAVTYTEHAKR 11 1 1 Unmodified _DAVTYTEHAKR_ 0 0 0 1 B2R4R0;P62805 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 430.8859 3 430.886081 1289.63641 89578.98 0.10452 4.5037E-05 0.1421 6.123E-05 0.24663 0.00010627 430.886139279921 436.893692046324 76.247 1.4038 76.247 75.3 76.704 7.6294E-06 480 120 6 0 0 0 0.0045602 2 39277 46.796 41.658 1 0.66968 0.80016 0 104830000 56424000 48410000 639 528 314 353 1042;1043 1042 DDDDIDLFGSDDEEESEEAK 20 1 0 Phospho (STY) _DDDDIDLFGS(ph)DDEEESEEAK_ DDDDIDLFGS(0.986)DDEEES(0.014)EEAK DDDDIDLFGS(18.48)DDEEES(-18.48)EEAK 0 0 1 0 C9JZW3;A0A024R3W7;P24534 C9JZW3 C9JZW3 EEF1B2 Elongation factor 1-beta MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1180.9294 2 1176.92358 2351.8326 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.19 1 108.19 107.69 108.69 0 0 0 0 8.6804E-07 1 63359 69.979 60.573 2 640 82 315 354 1044 1044 108 DDDIAALVVDNGSGMCK 17 1 0 Acetyl (Protein N-term),Oxidation (M) _(ac)DDDIAALVVDNGSGM(ox)CK_ DDDIAALVVDNGSGM(1)CK DDDIAALVVDNGSGM(45.92)CK 1 1 0 0 B4E335;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4DW52;G5E9R0;E7EVS6;C9JTX5;C9JZR7 B4E335 B4E335 PS1TP5BP1;ACTB Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 923.9112 2 919.400766 1836.78698 NaN NaN NaN 0.62296 0.00057275 NaN NaN NaN NaN 118.45 0.36864 118.45 118.19 118.56 0 0 0 0 0.00030582 1 70975 45.915 32.488 1 NaN NaN 0 3823200 0 3823200 641 683 316 355 1045 1045 171 DDGKLDLSVVENGGLK 16 2 0 Phospho (STY) _DDGKLDLS(ph)VVENGGLK_ DDGKLDLS(1)VVENGGLK DDGKLDLS(52.52)VVENGGLK 0 0 1 1 A8K245;Q99986;H0YJJ9;H0YJ50 A8K245 A8K245 VRK1 Serine/threonine-protein kinase VRK1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 878.4326 2 869.916582 1737.81861 66512.57 1.114 0.00096912 0.27611 0.0002402 1.3902 0.0012093 869.916850793102 877.930921439803 115.34 0.70139 115.34 115.04 115.74 7.6294E-06 322 59 7 0 0 0 0.00013425 1 74219 52.52 52.52 1 0.98074 0.80819 0 21198000 11422000 9775300 642 448 317 356 1046 1046 779 DDGSSMSFYVRPSPAK 16 1 1 Oxidation (M),Phospho (STY) _DDGSSM(ox)SFYVRPS(ph)PAK_ DDGSSM(1)SFYVRPSPAK DDGS(0.002)S(0.002)MS(0.002)FY(0.005)VRPS(0.991)PAK DDGSSM(41.09)SFYVRPSPAK DDGS(-28.08)S(-28.08)MS(-28.08)FY(-23.42)VRPS(23.42)PAK 0 1 1 1 Q9NYB0 Q9NYB0 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 929.8991 2 920.384591 1838.75463 64044.46 0.27215 0.00025048 0.12523 0.00011526 0.39738 0.00036574 920.384448779132 929.39567828001 73.335 0.83107 73.335 72.971 73.802 0 212 73 5 0 0 0 0.0017166 1 37610 41.088 34.855 5 1.2356 1.4246 0 26291000 10470000 15822000 643 1224 318 357 1047 1047 351 2486 DDGSSMSFYVRPSPAK 16 1 1 Oxidation (M),Phospho (STY) _DDGSSM(ox)SFYVRPS(ph)PAK_ DDGSSM(1)SFYVRPSPAK DDGSSMSFYVRPS(1)PAK DDGSSM(70.34)SFYVRPSPAK DDGS(-60.59)S(-59.94)MS(-48.8)FY(-50.94)VRPS(48.8)PAK 0 1 1 1 Q9NYB0 Q9NYB0 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 929.3964 2 920.384591 1838.75463 63201.93 1.0234 0.00094191 0.19117 0.00017595 1.2146 0.0011179 920.383882716039 929.396237384246 65.623 1.1841 65.623 65.237 66.421 0 448 105 6 0 0 0 3.7663E-05 1 40920 70.335 70.335 5 1.5073 1.159 0 31043000 12669000 18374000 644 1224 318 357 1048 1048 351 2486 DDGSTLMEIDGDK 13 1 0 Oxidation (M) _DDGSTLM(ox)EIDGDK_ DDGSTLM(1)EIDGDK DDGSTLM(79.66)EIDGDK 0 1 0 0 C9JQT2;H7C5S0;Q6FI97;Q53FS0;O96019 C9JQT2 C9JQT2 ACTL6A;BAF53A Actin-like protein 6A MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 710.3079 2 706.298304 1410.58205 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.38 1 68.38 67.88 68.88 0 0 0 0 2.6961E-05 1 33895 79.659 67.423 1 645 746 319 358 1049 1049 198 DDGVFVQEVTQNSPAAR 17 0 1 Phospho (STY) _DDGVFVQEVTQNS(ph)PAAR_ DDGVFVQEVT(0.01)QNS(0.99)PAAR DDGVFVQEVT(-20.09)QNS(20.09)PAAR 0 0 1 0 Q09666;B4DTV0;E9PJZ0;E9PKR9;E9PJC6;E9PLK4;Q96EC4;Q9BVU3;E9PQE3 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 962.4313 2 956.925469 1911.83639 61159 0.37057 0.00035461 -0.67509 -0.00064601 -0.30452 -0.0002914 956.924842957244 961.929327192107 92.029 1.6427 92.029 90.984 92.627 7.6294E-06 634 143 8 0 0 0 4.1282E-12 2 50842 95.662 80.122 2 1.5091 1.9049 0 85763000 32425000 53338000 646 1042 320 359 1050;1051 1051 1937 DDGVFVQEVTQNSPAAR 17 0 1 Phospho (STY) _DDGVFVQEVTQNS(ph)PAAR_ DDGVFVQEVT(0.004)QNS(0.996)PAAR DDGVFVQEVT(-23.95)QNS(23.95)PAAR 0 0 1 0 Q09666;B4DTV0;E9PJZ0;E9PKR9;E9PJC6;E9PLK4;Q96EC4;Q9BVU3;E9PQE3 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 961.9303 2 956.925469 1911.83639 60730.16 0.77406 0.00074072 1.0282 0.00098389 1.8022 0.0017246 957.428270004639 961.929942886329 97.662 1.0762 97.662 97.193 98.269 0 579 99 8 0 0 0 2.6528E-43 1 62774 142.26 142.26 2 0.79098 0.53745 0 58395000 33858000 24537000 647 1042 320 359 1052 1052 1937 DDLGNTLEK 9 1 0 Unmodified _DDLGNTLEK_ 0 0 0 0 O75367;Q59FH0 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 502.7486 2 502.748379 1003.4822 86249.87 0.39798 0.00020009 0.084527 4.2496E-05 0.48251 0.00024258 502.748362550832 506.755380032477 61.909 1.0008 61.909 61.645 62.646 0 263 71 8 0 0 0 5.415E-09 2 28645 136.27 101.46 1 1.112 1.3774 0 153080000 72899000 80186000 648 935 321 360 1053;1054 1054 DDLGNTLEK 9 1 0 Unmodified _DDLGNTLEK_ 0 0 0 0 O75367;Q59FH0 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 502.7482 2 502.748379 1003.4822 84451.16 0.61113 0.00030724 -0.17802 -8.9502E-05 0.4331 0.00021774 502.74824485405 506.755304922801 40.603 0.86938 40.603 40.227 41.096 0 368 77 7 0 0 0 0.00072322 2 23461 86.67 61.776 1 1.1744 0.77319 0 58340000 26611000 31729000 649 935 321 360 1055;1056 1056 DDLGNTLEK 9 1 0 Unmodified _DDLGNTLEK_ 0 0 0 0 O75367;Q59FH0 O75367 O75367 H2AFY Core histone macro-H2A.1 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1012.5048 1 1004.48948 1003.4822 NaN NaN NaN 0.22534 0.00022635 NaN NaN NaN NaN 40.586 0.52886 40.586 40.342 40.87 0 0 0 0 0.028716 1 23499 16.566 9.8427 1 NaN NaN 0 5850700 0 5850700 650 935 321 360 1057 1057 DDPSKPVHLTAFLGYK 16 2 0 Unmodified _DDPSKPVHLTAFLGYK_ 0 0 0 1 B3KS36;P39023;Q8TBW1;Q96QL0;H7C3M2;H7C422;B4DN06;F8WCR1 B3KS36 B3KS36 RPL3 60S ribosomal protein L3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 596.9839 3 596.649071 1786.92539 82733.56 1.0992 0.00065586 -0.091533 -5.4613E-05 1.0077 0.00060125 596.648857602616 601.991769657414 106.39 0.44314 106.39 106.16 106.6 0 93 41 5 0 0 0 0.0072469 1 68439 23.799 19.331 1 0.90227 0.78881 0 4073500 1611600 2461900 651 597 322 361 1058 1058 DDSIISSLDVTDIAPSR 17 0 1 Phospho (STY) _DDS(ph)IISSLDVTDIAPSR_ DDS(0.994)IIS(0.003)S(0.003)LDVTDIAPSR DDS(25.07)IIS(-25.46)S(-25.07)LDVT(-38.41)DIAPS(-46.32)R 0 0 1 0 A0A024RAP0;A0A024RAL0;A0A024RAQ8;Q13426 A0A024RAP0 A0A024RAP0 XRCC4 DNA repair protein XRCC4 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 942.437 2 942.435335 1882.85612 NaN NaN NaN NaN NaN NaN NaN NaN NaN 126.23 1 126.23 125.73 126.73 -7.6294E-06 0 0 0 0.0016552 1 76528 46.319 35.274 5 652 183 323 362 1059 1059 292 DDSLDLSPQGR 11 0 1 Phospho (STY) _DDSLDLS(ph)PQGR_ DDSLDLS(1)PQGR DDS(-96.18)LDLS(96.18)PQGR 0 0 1 0 Q14669 Q14669 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 641.769 2 641.769189 1281.52383 76633.63 0.77442 0.000497 -0.49441 -0.0003173 0.28001 0.0001797 641.768906496276 646.773228764994 70.929 1.0468 70.929 70.394 71.441 0 317 101 5 0 0 0 5.5107E-14 3 35542 133.32 112.91 2 1.2448 1.538 0 33327000 13969000 19358000 653 1057 324 363 1060;1061;1062 1061 1970 DDSLDLSPQGR 11 0 1 Phospho (STY) _DDSLDLS(ph)PQGR_ DDSLDLS(1)PQGR DDS(-72.09)LDLS(72.09)PQGR 0 0 1 0 Q14669 Q14669 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 646.7739 2 641.769189 1281.52383 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.374 1 70.374 69.874 70.874 0 0 0 0 0.0038965 1 35165 98.105 75.365 2 654 1057 324 363 1063 1063 1970 DDSLDLSPQGR 11 0 1 Phospho (STY) _DDSLDLS(ph)PQGR_ DDSLDLS(1)PQGR DDS(-78.05)LDLS(78.05)PQGR 0 0 1 0 Q14669 Q14669 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 646.7739 2 641.769189 1281.52383 74590.51 1.1012 0.00070674 -0.018237 -1.1704E-05 1.083 0.00069503 641.768862127892 646.773346174293 71.372 1.5252 71.372 70.67 72.195 7.6294E-06 677 138 8 0 0 0 1.0883E-08 3 44949 110.31 99.381 2 2.2923 1.5599 0 54132000 16116000 38016000 655 1057 324 363 1064;1065;1066 1065 1970 DDSPDEVPSTFTVQQPPPSR 20 0 1 Phospho (STY) _DDS(ph)PDEVPSTFTVQQPPPSR_ DDS(0.993)PDEVPS(0.003)T(0.003)FTVQQPPPSR DDS(24.77)PDEVPS(-24.77)T(-24.77)FT(-33.8)VQQPPPS(-41.4)R 0 0 1 0 A8K4Q3;Q8N328 A8K4Q3 A8K4Q3 hCG_32740;PGBD3 PiggyBac transposable element-derived protein 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1145.5081 2 1139.99682 2277.97909 56331.41 0.6206 0.00070748 2.0714 0.0023613 2.692 0.0030688 1140.49971297333 1145.50599596406 104.63 0.66075 104.63 104.4 105.06 7.6294E-06 324 65 8 0 0 0 0.00019186 1 67307 41.513 36.712 5 1.1888 0.85941 0 26968000 13644000 13323000 656 463 325 364 1067 1067 799 DDVAPESGDTTVK 13 1 0 Unmodified _DDVAPESGDTTVK_ 0 0 0 0 Q32Q62;J3QSV6;A0PJ61;O76021 Q32Q62 Q32Q62 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 671.3175 2 667.309529 1332.6045 75034.31 0.88602 0.00059125 0.12767 8.5194E-05 1.0137 0.00067644 667.309561449074 671.316845882617 29.135 0.51867 29.135 28.922 29.441 1.9073E-06 152 35 7 0 0 0 0.0198 1 14936 47.288 40.847 1 0.69848 0.48279 0 24066000 13603000 10463000 657 1084 326 365 1068 1068 DEALSDGDDLRDFPSDLK 18 1 1 Phospho (STY) _DEALS(ph)DGDDLRDFPSDLK_ DEALS(1)DGDDLRDFPSDLK DEALS(84.21)DGDDLRDFPS(-84.21)DLK 0 0 1 1 X5DRB1;A8K146;A0A024R2M8;Q01831;D9I4E1;D2CPK1;E7EUB5;D2CPI9;D2CPJ0;D2CPJ8 X5DRB1 X5DRB1 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1053.4557 2 1044.44389 2086.87322 60009.8 0.59507 0.00062152 0.22049 0.00023029 0.81556 0.00085181 1044.44343926647 1053.45547240114 109.44 1.0925 109.44 108.95 110.05 0 538 83 9 0 0 0 2.8272E-44 2 64645 138.97 120.21 2 0.49249 0.59479 0 238990000 160750000 78238000 658 66 327 366 1069;1070 1070 84 DEALSDGDDLRDFPSDLK 18 1 1 Phospho (STY) _DEALS(ph)DGDDLRDFPSDLK_ DEALS(0.999)DGDDLRDFPS(0.001)DLK DEALS(32.58)DGDDLRDFPS(-32.58)DLK 0 0 1 1 X5DRB1;A8K146;A0A024R2M8;Q01831;D9I4E1;D2CPK1;E7EUB5;D2CPI9;D2CPJ0;D2CPJ8 X5DRB1 X5DRB1 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 702.6397 3 696.631685 2086.87322 73150.4 0.79177 0.00055157 -0.021297 -1.4836E-05 0.77047 0.00053673 696.631526743155 702.639191118463 109.51 1.1731 109.51 108.85 110.02 0 505 89 9 0 0 0 2.5434E-09 1 64261 81.665 59.029 2 0.52212 0.62524 0 124290000 75714000 48575000 659 66 327 366 1071 1071 84 DEALSDGDDLRDFPSDLK 18 1 1 Phospho (STY) _DEALS(ph)DGDDLRDFPSDLK_ DEALS(1)DGDDLRDFPSDLK DEALS(34.92)DGDDLRDFPS(-34.92)DLK 0 0 1 1 X5DRB1;A8K146;A0A024R2M8;Q01831;D9I4E1;D2CPK1;E7EUB5;D2CPI9;D2CPJ0;D2CPJ8 X5DRB1 X5DRB1 XPC DNA repair protein complementing XP-C cells ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1044.9465 2 1044.44389 2086.87322 NaN NaN NaN 0.37086 0.00038734 NaN NaN NaN NaN 114.02 0.99299 114.02 113.61 114.6 0 0 0 0 0.00016822 2 73297 48.907 24.349 2 NaN NaN 0 38396000 38396000 0 660 66 327 366 1072;1073 1072 84 DEDEDEDVASPDGLGR 16 0 1 Phospho (STY) _DEDEDEDVAS(ph)PDGLGR_ DEDEDEDVAS(1)PDGLGR DEDEDEDVAS(47.64)PDGLGR 0 0 1 0 O95365 O95365 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 899.836 2 899.836182 1797.65781 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.89 1 66.89 66.39 67.39 0 0 0 0 0.00097476 1 32741 47.639 32.437 1 661 947 328 367 1074 1074 1638 DEDISLTLNMNEEEVEK 17 1 0 Oxidation (M) _DEDISLTLNM(ox)NEEEVEK_ DEDISLTLNM(1)NEEEVEK DEDISLTLNM(47.29)NEEEVEK 0 1 0 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1013.4593 2 1012.45425 2022.89395 NaN NaN NaN 1.4856 0.0015041 NaN NaN NaN NaN 97.957 0.5698 97.957 97.664 98.234 0 0 0 0 0.001911 1 55402 47.288 33.479 1 NaN NaN 0 25972000 25972000 0 662 99 329 368 1075 1075 20 DEDISLTLNMNEEEVEK 17 1 0 Oxidation (M) _DEDISLTLNM(ox)NEEEVEK_ DEDISLTLNM(1)NEEEVEK DEDISLTLNM(72.7)NEEEVEK 0 1 0 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1016.462 2 1012.45425 2022.89395 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.789 1 97.789 97.289 98.289 7.6294E-06 0 0 0 7.9298E-08 1 55412 72.705 50.507 1 663 99 329 368 1076 1076 20 DEETYETFDPPLHSTAIYADEEEFSK 26 1 0 Phospho (STY) _DEETYETFDPPLHS(ph)TAIYADEEEFSK_ DEET(0.016)Y(0.091)ET(0.084)FDPPLHS(0.395)T(0.395)AIY(0.018)ADEEEFSK DEET(-13.91)Y(-6.38)ET(-6.73)FDPPLHS(0)T(0)AIY(-13.47)ADEEEFS(-29.99)K 0 0 1 0 D6R9S4;Q09GN1;Q71F23;A8K8D2 D6R9S4 D6R9S4 CENPU;MLF1IP Centromere protein U MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1048.7692 3 1048.43582 3142.28562 60026.81 0.54525 0.00057166 0.4007 0.00042011 0.94595 0.00099176 1048.77025409007 1051.44178501436 121.56 0.69588 121.56 121.25 121.94 0 297 52 9 0 0 0 3.3679E-09 1 73549 48.489 45.374 7 0.75741 0.94566 0 26145000 13909000 12236000 664 772 330 369 1077 1077 1300;2812 DEGSYDLGER 10 0 1 Phospho (STY) _DEGS(ph)YDLGER_ DEGS(0.999)Y(0.001)DLGER DEGS(31.64)Y(-31.64)DLGER 0 0 1 0 B4DT61;E7ESK6;E9PBI9;B7Z5H2;B4DQ56;A0A024R9D1;P34741 B4DT61 B4DT61 SDC2 Syndecan;Syndecan-2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 615.7297 2 610.72699 1219.43943 79405.56 0.27339 0.00016697 0.48892 0.0002986 0.76231 0.00046556 610.727210149122 615.731352401776 53.338 1.1004 53.338 52.688 53.788 0 205 91 4 0 0 0 0.0014291 2 22237 77.64 70.074 2 1.7801 1.9514 0 6979300 2195100 4784200 665 163 331 370 1078;1079 1079 254 DEIENSIVHR 10 0 1 Unmodified _DEIENSIVHR_ 0 0 0 0 B4DSL9;B3KQ21;Q9NYH9;B7Z9G4 B4DSL9 B4DSL9 UTP6 U3 small nucleolar RNA-associated protein 6 homolog ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 611.3093 2 606.304384 1210.59421 NaN NaN NaN -0.15937 -9.6626E-05 NaN NaN NaN NaN 79.238 0.79061 79.238 78.824 79.614 -7.6294E-06 0 0 0 0.00045648 1 41491 76.827 37.679 1 NaN NaN 0 8760400 0 8760400 666 591 332 371 1080 1080 DEILPTTPISEQK 13 1 0 Phospho (STY) _DEILPTT(ph)PISEQK_ DEILPT(0.001)T(0.995)PIS(0.004)EQK DEILPT(-29.4)T(24.15)PIS(-24.15)EQK 0 0 1 0 E9PPU1;H0YEU2;E9PL09;Q53G83;P23396;E9PSF4;Q9NQS8 E9PPU1 E9PPU1 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 780.3801 2 775.871111 1549.72767 68872.27 1.0567 0.00081989 -0.024039 -1.8651E-05 1.0327 0.00080124 775.871195430942 779.878197147902 97.496 2.0027 97.496 96.787 98.79 0 1140 165 10 0 0 0 1.3718E-25 5 54833 146.67 134.1 3 1.2785 1.5752 0 1754700000 753430000 1001300000 667 812 333 372 1081;1082;1083;1084;1085 1083 1403;2829 DEILPTTPISEQK 13 1 0 Phospho (STY) _DEILPTTPIS(ph)EQK_ DEILPT(0.088)T(0.429)PIS(0.483)EQK DEILPT(-7.38)T(-0.51)PIS(0.51)EQK 0 0 1 0 E9PPU1;H0YEU2;E9PL09;Q53G83;P23396;E9PSF4;Q9NQS8 E9PPU1 E9PPU1 RPS3 40S ribosomal protein S3 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 779.8785 2 775.871111 1549.72767 NaN NaN NaN 0.64856 0.0005032 NaN NaN NaN NaN 99.537 0.12148 99.537 99.464 99.585 0 0 0 0 0.011564 1 56782 40.577 24.353 3 NaN NaN 0 2739100 0 2739100 668 812 333 372 1086 1086 1403;2829 DEILPTTPISEQK 13 1 0 Phospho (STY) _DEILPTT(ph)PISEQK_ DEILPT(0.103)T(0.888)PIS(0.009)EQK DEILPT(-9.34)T(9.34)PIS(-20.06)EQK 0 0 1 0 E9PPU1;H0YEU2;E9PL09;Q53G83;P23396;E9PSF4;Q9NQS8 E9PPU1 E9PPU1 RPS3 40S ribosomal protein S3 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 775.8708 2 775.871111 1549.72767 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.523 1 98.523 98.023 99.023 7.6294E-06 0 0 0 0.00011538 1 55978 81.431 64.315 3 669 812 333 372 1087 1087 1403;2829 DEILPTTPISEQK 13 1 0 Phospho (STY) _DEILPTT(ph)PISEQK_ DEILPT(0.205)T(0.599)PIS(0.196)EQK DEILPT(-4.66)T(4.66)PIS(-4.86)EQK 0 0 1 0 E9PPU1;H0YEU2;E9PL09;Q53G83;P23396;E9PSF4;Q9NQS8 E9PPU1 E9PPU1 RPS3 40S ribosomal protein S3 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 775.8699 2 775.871111 1549.72767 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.939 1 98.939 98.439 99.439 0 0 0 0 0.0045217 1 56327 52.576 34.503 3 670 812 333 372 1088 1088 1403;2829 DEILPTTPISEQK 13 1 0 Phospho (STY) _DEILPTT(ph)PISEQK_ DEILPT(0.143)T(0.831)PIS(0.026)EQK DEILPT(-7.64)T(7.64)PIS(-15.1)EQK 0 0 1 0 E9PPU1;H0YEU2;E9PL09;Q53G83;P23396;E9PSF4;Q9NQS8 E9PPU1 E9PPU1 RPS3 40S ribosomal protein S3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 775.8707 2 775.871111 1549.72767 69310.38 1.1145 0.00086475 -0.65422 -0.00050759 0.46033 0.00035716 775.870661751914 779.877749574238 103.5 1.5162 103.5 102.96 104.47 0 1047 146 10 0 0 0 0.032055 1 66462 63.76 53.15 3 0.89863 0.59991 0 341720000 178180000 163550000 671 812 333 372 1089 1089 1403;2829 DEILPTTPISEQK 13 1 0 Unmodified _DEILPTTPISEQK_ 0 0 0 0 E9PPU1;H0YEU2;E9PL09;Q53G83;P23396;E9PSF4;Q9NQS8 E9PPU1 E9PPU1 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 739.8958 2 735.887946 1469.76134 72183.89 1.3 0.00095665 0.47853 0.00035214 1.7785 0.0013088 735.888745890667 739.895112095566 97.423 1.0495 97.423 96.748 97.798 0 224 87 4 0 0 0 0.00047398 1 54993 84.17 77.786 1 1.1496 1.4436 0 28158000 11113000 17045000 672 812 333 373 1090 1090 DEILPTTPISEQK 13 1 0 Unmodified _DEILPTTPISEQK_ 0 0 0 0 E9PPU1;H0YEU2;E9PL09;Q53G83;P23396;E9PSF4;Q9NQS8 E9PPU1 E9PPU1 RPS3 40S ribosomal protein S3 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 735.8887 2 735.887946 1469.76134 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.281 1 96.281 95.781 96.781 7.6294E-06 0 0 0 0.0044499 1 61967 47.559 28.779 1 673 812 333 373 1091 1091 DEILPTTPISEQK 13 1 0 2 Phospho (STY) _DEILPTT(ph)PIS(ph)EQK_ DEILPT(0.191)T(0.832)PIS(0.977)EQK DEILPT(-6.83)T(6.83)PIS(15.48)EQK 0 0 2 0 E9PPU1;H0YEU2;E9PL09;Q53G83;P23396;E9PSF4;Q9NQS8 E9PPU1 E9PPU1 RPS3 40S ribosomal protein S3 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 819.8671 2 815.854277 1629.694 NaN NaN NaN 2.7436 0.0022384 NaN NaN NaN NaN 100.6 0.63698 100.6 100.2 100.83 0 0 0 0 0.0028752 1 57559 47.774 36.082 3 NaN NaN 0 13360000 0 13360000 674 812 333 374 1092 1092 1403;2829 DELADEIANSSGK 13 1 0 Phospho (STY) _DELADEIANSS(ph)GK_ DELADEIANS(0.363)S(0.637)GK DELADEIANS(-2.43)S(2.43)GK 0 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 718.8068 2 714.798143 1427.58173 77074.25 0.62571 0.00044726 0.35273 0.00025213 0.97844 0.00069939 714.798740595872 718.805412573253 69.618 0.65461 69.618 69.393 70.048 0 150 63 5 0 0 0 3.7825E-129 1 34807 217.16 197.89 2 2.4761 3.0172 0 18468000 4881200 13587000 675 49 334 375 1093 1093 57;58 DELADEIANSSGK 13 1 0 Phospho (STY) _DELADEIANS(ph)SGK_ DELADEIANS(0.5)S(0.5)GK DELADEIANS(0)S(0)GK 0 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 718.8048 2 714.798143 1427.58173 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.057 1 69.057 68.557 69.557 0 0 0 0 1.0801E-05 1 34329 74.987 56.207 2 676 49 334 375 1094 1094 57;58 DELADEIANSSGK 13 1 0 Phospho (STY) _DELADEIANS(ph)SGK_ DELADEIANS(0.583)S(0.417)GK DELADEIANS(1.46)S(-1.46)GK 0 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 714.7978 2 714.798143 1427.58173 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.532 1 69.532 69.032 70.032 0 0 0 0 0.0024887 1 34622 47.774 30.562 2 677 49 334 375 1095 1095 57;58 DELADEIANSSGK 13 1 0 Phospho (STY) _DELADEIANS(ph)SGK_ DELADEIANS(0.5)S(0.5)GK DELADEIANS(0)S(0)GK 0 0 1 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 718.8063 2 714.798143 1427.58173 NaN NaN NaN 0.24889 0.00017791 NaN NaN NaN NaN 69.762 0.99052 69.762 69.284 70.274 0 0 0 0 0.001123 1 44024 71.529 56.862 2 NaN NaN 0 3786600 0 3786600 678 49 334 375 1096 1096 57;58 DELHIVEAEAMNYEGSPIK 19 1 0 Oxidation (M),Phospho (STY) _DELHIVEAEAM(ox)NYEGS(ph)PIK_ DELHIVEAEAM(1)NYEGSPIK DELHIVEAEAMNY(0.003)EGS(0.997)PIK DELHIVEAEAM(102.43)NYEGSPIK DELHIVEAEAMNY(-25.84)EGS(25.84)PIK 0 1 1 0 A0A140VJQ2;A0A0S2Z4G7;A4ZU86;A0A0S2Z491;P06748 A0A140VJQ2 A0A140VJQ2 NPM1 Nucleophosmin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1121.4944 2 1120.99269 2239.97083 56430.79 0.30773 0.00034496 -0.39168 -0.00043907 -0.083954 -9.4112E-05 1121.49392279222 1125.50094951076 111.59 3.383 111.59 110.46 113.84 0 2221 303 13 0 0 0 7.2653E-22 4 66023 102.43 92.268 2 1.6897 2.0825 0 1535900000 589870000 945980000 679 350 335 376 1097;1098;1099;1100 1099 83 548;3017 DELHIVEAEAMNYEGSPIK 19 1 0 Oxidation (M),Phospho (STY) _DELHIVEAEAM(ox)NYEGS(ph)PIK_ DELHIVEAEAM(1)NYEGSPIK DELHIVEAEAMNYEGS(1)PIK DELHIVEAEAM(133.65)NYEGSPIK DELHIVEAEAMNY(-54.13)EGS(54.13)PIK 0 1 1 0 A0A140VJQ2;A0A0S2Z4G7;A4ZU86;A0A0S2Z491;P06748 A0A140VJQ2 A0A140VJQ2 NPM1 Nucleophosmin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 750.6698 3 747.66422 2239.97083 68656.63 0.76545 0.0005723 -0.28751 -0.00021496 0.47793 0.00035733 747.99896507396 750.669525180694 111.29 4.576 111.29 110.42 114.99 0 3105 410 14 0 0 0 4.3072E-46 6 65943 133.65 125.23 2 1.6869 2.075 0 3744000000 1370700000 2373300000 680 350 335 376 1101;1102;1103;1104;1105;1106 1103 83 548;3017 DELHIVEAEAMNYEGSPIK 19 1 0 Oxidation (M),Phospho (STY) _DELHIVEAEAM(ox)NYEGS(ph)PIK_ DELHIVEAEAM(1)NYEGSPIK DELHIVEAEAMNY(0.031)EGS(0.969)PIK DELHIVEAEAM(41.9)NYEGSPIK DELHIVEAEAMNY(-14.95)EGS(14.95)PIK 0 1 1 0 A0A140VJQ2;A0A0S2Z4G7;A4ZU86;A0A0S2Z491;P06748 A0A140VJQ2 A0A140VJQ2 NPM1 Nucleophosmin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 750.3654 3 747.66422 2239.97083 79616.82 0.77482 0.0005793 -0.6042 -0.00045174 0.17062 0.00012757 747.663455723544 750.669543762952 120.93 0.29401 120.93 120.75 121.04 0 63 21 5 0 0 0 0.00114 1 72905 41.904 38.184 2 1.3587 1.6105 0 5944100 2884300 3059900 681 350 335 376 1107 1107 83 548;3017 DELHIVEAEAMNYEGSPIK 19 1 0 Oxidation (M),Phospho (STY) _DELHIVEAEAM(ox)NYEGS(ph)PIK_ DELHIVEAEAM(1)NYEGSPIK DELHIVEAEAMNY(0.16)EGS(0.84)PIK DELHIVEAEAM(54.29)NYEGSPIK DELHIVEAEAMNY(-7.2)EGS(7.2)PIK 0 1 1 0 A0A140VJQ2;A0A0S2Z4G7;A4ZU86;A0A0S2Z491;P06748 A0A140VJQ2 A0A140VJQ2 NPM1 Nucleophosmin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 750.6703 3 747.66422 2239.97083 72645.7 0.67987 0.00050832 -0.26541 -0.00019844 0.41447 0.00030988 747.998113707691 750.669983660962 132.03 0.36545 132.03 131.88 132.25 0 98 32 5 0 0 0 4.7031E-06 2 80266 54.288 48.62 2 1.2987 1.5399 0 7143700 3115000 4028700 682 350 335 376 1108;1109 1108 83 548;3017 DELHIVEAEAMNYEGSPIK 19 1 0 Oxidation (M),Phospho (STY) _DELHIVEAEAM(ox)NYEGS(ph)PIK_ DELHIVEAEAM(1)NYEGSPIK DELHIVEAEAMNY(0.037)EGS(0.963)PIK DELHIVEAEAM(69.72)NYEGSPIK DELHIVEAEAMNY(-14.13)EGS(14.13)PIK 0 1 1 0 A0A140VJQ2;A0A0S2Z4G7;A4ZU86;A0A0S2Z491;P06748 A0A140VJQ2 A0A140VJQ2 NPM1 Nucleophosmin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 750.3364 3 747.66422 2239.97083 72613.12 0.65223 0.00048765 -0.34327 -0.00025665 0.30895 0.00023099 747.997345779906 750.33559446272 132.35 0.44991 132.35 132.22 132.67 0 91 38 4 0 0 0 8.7411E-08 1 80566 69.72 61.533 2 1.7803 2.1099 0 5741700 1703100 4038700 683 350 335 376 1110 1110 83 548;3017 DELHIVEAEAMNYEGSPIK 19 1 0 Oxidation (M),Phospho (STY) _DELHIVEAEAM(ox)NYEGS(ph)PIK_ DELHIVEAEAM(1)NYEGSPIK DELHIVEAEAMNY(0.042)EGS(0.958)PIK DELHIVEAEAM(60.73)NYEGSPIK DELHIVEAEAMNY(-13.53)EGS(13.53)PIK 0 1 1 0 A0A140VJQ2;A0A0S2Z4G7;A4ZU86;A0A0S2Z491;P06748 A0A140VJQ2 A0A140VJQ2 NPM1 Nucleophosmin ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 750.3349 3 747.66422 2239.97083 NaN NaN NaN -0.04306 -3.2194E-05 NaN NaN NaN NaN 108.72 0.44372 108.72 108.55 108.99 0 0 0 0 5.1224E-09 1 63706 60.735 47.886 2 NaN NaN 0 7340500 0 7340500 684 350 335 376 1111 1111 83 548;3017 DELHIVEAEAMNYEGSPIK 19 1 0 Oxidation (M),Phospho (STY) _DELHIVEAEAM(ox)NYEGS(ph)PIK_ DELHIVEAEAM(1)NYEGSPIK DELHIVEAEAMNY(0.002)EGS(0.998)PIK DELHIVEAEAM(112.36)NYEGSPIK DELHIVEAEAMNY(-27.42)EGS(27.42)PIK 0 1 1 0 A0A140VJQ2;A0A0S2Z4G7;A4ZU86;A0A0S2Z491;P06748 A0A140VJQ2 A0A140VJQ2 NPM1 Nucleophosmin ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 750.6702 3 747.66422 2239.97083 NaN NaN NaN 0.075477 5.6431E-05 NaN NaN NaN NaN 116.05 1.6624 116.05 115.79 117.45 0 0 0 0 5.2762E-28 1 70027 112.36 99.514 2 NaN NaN 0 11460000 0 11460000 685 350 335 376 1112 1112 83 548;3017 DELHIVEAEAMNYEGSPIK 19 1 0 Oxidation (M),Phospho (STY) _DELHIVEAEAM(ox)NYEGS(ph)PIK_ DELHIVEAEAM(1)NYEGSPIK DELHIVEAEAMNY(0.043)EGS(0.957)PIK DELHIVEAEAM(60.13)NYEGSPIK DELHIVEAEAMNY(-13.51)EGS(13.51)PIK 0 1 1 0 A0A140VJQ2;A0A0S2Z4G7;A4ZU86;A0A0S2Z491;P06748 A0A140VJQ2 A0A140VJQ2 NPM1 Nucleophosmin ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 750.6709 3 747.66422 2239.97083 NaN NaN NaN 0.5315 0.00039739 NaN NaN NaN NaN 117.86 0.10114 117.86 117.8 117.91 -7.6294E-06 0 0 0 5.5621E-09 2 70675 60.133 51.743 2 NaN NaN 0 5746700 0 5746700 686 350 335 376 1113;1114 1114 83 548;3017 DELHIVEAEAMNYEGSPIK 19 1 0 Oxidation (M),Phospho (STY) _DELHIVEAEAM(ox)NYEGS(ph)PIK_ DELHIVEAEAM(1)NYEGSPIK DELHIVEAEAMNY(0.138)EGS(0.862)PIK DELHIVEAEAM(48.29)NYEGSPIK DELHIVEAEAMNY(-7.94)EGS(7.94)PIK 0 1 1 0 A0A140VJQ2;A0A0S2Z4G7;A4ZU86;A0A0S2Z491;P06748 A0A140VJQ2 A0A140VJQ2 NPM1 Nucleophosmin ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 750.3372 3 747.66422 2239.97083 NaN NaN NaN -2.5737 -0.0019243 NaN NaN NaN NaN 121.76 0.50499 121.76 121.67 122.17 0 0 0 0 8.2424E-05 1 73634 48.288 39.242 2 NaN NaN 0 6515100 0 6515100 687 350 335 376 1115 1115 83 548;3017 DELHIVEAEAMNYEGSPIK 19 1 0 Oxidation (M),Phospho (STY) _DELHIVEAEAM(ox)NYEGS(ph)PIK_ DELHIVEAEAM(1)NYEGSPIK DELHIVEAEAMNY(0.093)EGS(0.907)PIK DELHIVEAEAM(48.29)NYEGSPIK DELHIVEAEAMNY(-9.87)EGS(9.87)PIK 0 1 1 0 A0A140VJQ2;A0A0S2Z4G7;A4ZU86;A0A0S2Z491;P06748 A0A140VJQ2 A0A140VJQ2 NPM1 Nucleophosmin ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 750.6674 3 747.66422 2239.97083 NaN NaN NaN -0.37751 -0.00028225 NaN NaN NaN NaN 123 0.19606 123 122.89 123.09 -7.6294E-06 0 0 0 8.2424E-05 1 74407 48.288 39.469 2 NaN NaN 0 3637200 0 3637200 688 350 335 376 1116 1116 83 548;3017 DELHIVEAEAMNYEGSPIK 19 1 0 Oxidation (M),Phospho (STY) _DELHIVEAEAM(ox)NY(ph)EGSPIK_ DELHIVEAEAM(1)NYEGSPIK DELHIVEAEAMNY(0.995)EGS(0.005)PIK DELHIVEAEAM(69.93)NYEGSPIK DELHIVEAEAMNY(22.88)EGS(-22.88)PIK 0 1 1 0 A0A140VJQ2;A0A0S2Z4G7;A4ZU86;A0A0S2Z491;P06748 A0A140VJQ2 A0A140VJQ2 NPM1 Nucleophosmin MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 747.6639 3 747.66422 2239.97083 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117 1 117 116.5 117.5 0 0 0 0 4.5183E-07 1 70028 69.935 59.877 2 689 350 335 376 1117 1117 83 548;3017 DELHIVEAEAMNYEGSPIK 19 1 0 Oxidation (M),Phospho (STY) _DELHIVEAEAM(ox)NYEGS(ph)PIK_ DELHIVEAEAM(1)NYEGSPIK DELHIVEAEAMNY(0.261)EGS(0.739)PIK DELHIVEAEAM(43.35)NYEGSPIK DELHIVEAEAMNY(-4.52)EGS(4.52)PIK 0 1 1 0 A0A140VJQ2;A0A0S2Z4G7;A4ZU86;A0A0S2Z491;P06748 A0A140VJQ2 A0A140VJQ2 NPM1 Nucleophosmin MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 750.3351 3 747.66422 2239.97083 NaN NaN NaN NaN NaN NaN NaN NaN NaN 122.71 1 122.71 122.21 123.21 0 0 0 0 0.00076933 1 74224 43.349 35.127 2 690 350 335 376 1118 1118 83 548;3017 DELHIVEAEAMNYEGSPIK 19 1 0 Oxidation (M),Phospho (STY) _DELHIVEAEAM(ox)NYEGS(ph)PIK_ DELHIVEAEAM(1)NYEGSPIK DELHIVEAEAMNY(0.458)EGS(0.542)PIK DELHIVEAEAM(60.63)NYEGSPIK DELHIVEAEAMNY(-0.73)EGS(0.73)PIK 0 1 1 0 A0A140VJQ2;A0A0S2Z4G7;A4ZU86;A0A0S2Z491;P06748 A0A140VJQ2 A0A140VJQ2 NPM1 Nucleophosmin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1125.5026 2 1120.99269 2239.97083 56140.91 0.77052 0.00086375 -0.28057 -0.00031452 0.48995 0.00054923 1121.49407031814 1125.50097428769 115 2.4876 115 114.52 117.01 0 1457 228 13 0 0 0 3.8022E-07 3 74378 60.628 53.747 2 0.39567 0.26353 0 1386900000 1008900000 378000000 691 350 335 376 1119;1120;1121 1121 83 548;3017 DELHIVEAEAMNYEGSPIK 19 1 0 Oxidation (M),Phospho (STY) _DELHIVEAEAM(ox)NYEGS(ph)PIK_ DELHIVEAEAM(1)NYEGSPIK DELHIVEAEAMNY(0.011)EGS(0.989)PIK DELHIVEAEAM(77.51)NYEGSPIK DELHIVEAEAMNY(-19.57)EGS(19.57)PIK 0 1 1 0 A0A140VJQ2;A0A0S2Z4G7;A4ZU86;A0A0S2Z491;P06748 A0A140VJQ2 A0A140VJQ2 NPM1 Nucleophosmin ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 747.9991 3 747.66422 2239.97083 NaN NaN NaN 0.022572 1.6876E-05 NaN NaN NaN NaN 114.95 2.5434 114.95 114.5 117.05 0 0 0 0 3.7133E-12 2 74306 77.506 68.459 2 NaN NaN 0 1549100000 1549100000 0 692 350 335 376 1122;1123 1123 83 548;3017 DELHIVEAEAMNYEGSPIK 19 1 0 Oxidation (M),Phospho (STY) _DELHIVEAEAM(ox)NYEGS(ph)PIK_ DELHIVEAEAM(1)NYEGSPIK DELHIVEAEAMNY(0.025)EGS(0.975)PIK DELHIVEAEAM(53.6)NYEGSPIK DELHIVEAEAMNY(-15.98)EGS(15.98)PIK 0 1 1 0 A0A140VJQ2;A0A0S2Z4G7;A4ZU86;A0A0S2Z491;P06748 A0A140VJQ2 A0A140VJQ2 NPM1 Nucleophosmin ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 750.3361 3 747.66422 2239.97083 NaN NaN NaN -1.9866 -0.0014853 NaN NaN NaN NaN 114.96 2.2933 114.96 114.54 116.84 0 0 0 0 1.0105E-05 1 74333 53.603 45.213 2 NaN NaN 0 578320000 0 578320000 693 350 335 376 1124 1124 83 548;3017 DELHIVEAEAMNYEGSPIK 19 1 0 Oxidation (M),Phospho (STY) _DELHIVEAEAM(ox)NYEGS(ph)PIK_ DELHIVEAEAM(1)NYEGSPIK DELHIVEAEAMNY(0.033)EGS(0.967)PIK DELHIVEAEAM(41.67)NYEGSPIK DELHIVEAEAMNY(-14.72)EGS(14.72)PIK 0 1 1 0 A0A140VJQ2;A0A0S2Z4G7;A4ZU86;A0A0S2Z491;P06748 A0A140VJQ2 A0A140VJQ2 NPM1 Nucleophosmin MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 750.3374 3 747.66422 2239.97083 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.95 1 116.95 116.45 117.45 0 0 0 0 0.00090899 1 75352 41.672 31.884 2 694 350 335 376 1125 1125 83 548;3017 DELHIVEAEAMNYEGSPIK 19 1 0 Oxidation (M) _DELHIVEAEAM(ox)NYEGSPIK_ DELHIVEAEAM(1)NYEGSPIK DELHIVEAEAM(144.5)NYEGSPIK 0 1 0 0 A0A140VJQ2;A0A0S2Z4G7;A4ZU86;A0A0S2Z491;P06748 A0A140VJQ2 A0A140VJQ2 NPM1 Nucleophosmin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 724.0148 3 721.008776 2160.0045 71122.52 0.8681 0.00062591 -0.14151 -0.00010203 0.72659 0.00052388 721.34301036862 724.014485721839 116.94 2.0253 116.94 116.09 118.11 0 1147 182 10 0 0 0 3.7742E-55 6 70004 144.5 134.84 1 1.4494 1.8032 0 79583000 34044000 45539000 695 350 335 377 1126;1127;1128;1129;1130;1131 1129 83 DELHIVEAEAMNYEGSPIK 19 1 0 Oxidation (M) _DELHIVEAEAM(ox)NYEGSPIK_ DELHIVEAEAM(1)NYEGSPIK DELHIVEAEAM(89.37)NYEGSPIK 0 1 0 0 A0A140VJQ2;A0A0S2Z4G7;A4ZU86;A0A0S2Z491;P06748 A0A140VJQ2 A0A140VJQ2 NPM1 Nucleophosmin MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 721.0096 3 721.008776 2160.0045 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.19 1 116.19 115.69 116.69 0 0 0 0 6.3455E-10 1 69431 89.374 75.098 1 696 350 335 377 1132 1132 83 DELHIVEAEAMNYEGSPIK 19 1 0 Oxidation (M) _DELHIVEAEAM(ox)NYEGSPIK_ DELHIVEAEAM(1)NYEGSPIK DELHIVEAEAM(59.37)NYEGSPIK 0 1 0 0 A0A140VJQ2;A0A0S2Z4G7;A4ZU86;A0A0S2Z491;P06748 A0A140VJQ2 A0A140VJQ2 NPM1 Nucleophosmin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 721.3439 3 721.008776 2160.0045 70822.57 1.1525 0.000831 0.080075 5.7735E-05 1.2326 0.00088873 721.343294906584 724.014476360226 114.2 0.67592 114.2 113.85 114.52 0 261 48 9 0 0 0 2.1077E-07 1 73579 59.372 59.372 1 0.36153 0.24684 0 25138000 20901000 4236600 697 350 335 377 1133 1133 83 DELHIVEAEAMNYEGSPIK 19 1 0 Phospho (STY) _DELHIVEAEAMNYEGS(ph)PIK_ DELHIVEAEAMNY(0.005)EGS(0.995)PIK DELHIVEAEAMNY(-22.96)EGS(22.96)PIK 0 0 1 0 A0A140VJQ2;A0A0S2Z4G7;A4ZU86;A0A0S2Z491;P06748 A0A140VJQ2 A0A140VJQ2 NPM1 Nucleophosmin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 742.3342 3 742.332582 2223.97592 70104.92 1.1382 0.00084492 0.21514 0.0001597 1.3533 0.0010046 742.667236804082 745.33834880202 122.63 1.5661 122.63 122.16 123.73 7.6294E-06 1049 147 12 0 0 0 1.4792E-08 4 79611 68.569 68.569 2 0.70395 0.47026 0 228750000 134570000 94184000 698 350 335 378 1134;1135;1136;1137 1137 548;3017 DELHIVEAEAMNYEGSPIK 19 1 0 Phospho (STY) _DELHIVEAEAMNYEGS(ph)PIK_ DELHIVEAEAMNY(0.067)EGS(0.933)PIK DELHIVEAEAMNY(-11.47)EGS(11.47)PIK 0 0 1 0 A0A140VJQ2;A0A0S2Z4G7;A4ZU86;A0A0S2Z491;P06748 A0A140VJQ2 A0A140VJQ2 NPM1 Nucleophosmin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1117.5052 2 1112.99523 2223.97592 56968.93 0.72766 0.00080988 0.14663 0.0001632 0.87429 0.00097308 1113.49730120856 1117.50401681286 122.58 1.2768 122.58 122.13 123.41 0 852 118 11 0 0 0 0.00011835 1 79216 44.662 35.843 2 0.69466 0.46416 0 196570000 116470000 80102000 699 350 335 378 1138 1138 548;3017 DELHIVEAEAMNYEGSPIK 19 1 0 Phospho (STY) _DELHIVEAEAMNYEGS(ph)PIK_ DELHIVEAEAMNY(0.042)EGS(0.958)PIK DELHIVEAEAMNY(-13.6)EGS(13.6)PIK 0 0 1 0 A0A140VJQ2;A0A0S2Z4G7;A4ZU86;A0A0S2Z491;P06748 A0A140VJQ2 A0A140VJQ2 NPM1 Nucleophosmin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 745.0038 3 742.332582 2223.97592 70919.77 1.0475 0.0007776 -0.0096789 -7.185E-06 1.0378 0.00077042 742.667019045965 745.004020137056 133.77 0.35582 133.77 133.6 133.96 0 196 34 8 0 0 0 8.1644E-05 1 86217 43.64 43.64 2 0.77273 0.64523 0 5293500 2969900 2323600 700 350 335 378 1139 1139 548;3017 DENIHTSHITQDEFQR 16 0 1 Unmodified _DENIHTSHITQDEFQR_ 0 0 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 660.9759 3 657.304804 1968.89258 75930.8 1.1695 0.00076869 -0.026952 -1.7716E-05 1.1425 0.00075098 657.639164160871 660.641118378488 93.798 0.67482 93.798 93.342 94.017 0 205 55 6 0 0 0 9.4927E-06 3 52302 70.783 48.942 1 0.63019 0.78327 0 36328000 23012000 13316000 701 1035 336 379 1140;1141;1142 1140 DENIHTSHITQDEFQR 16 0 1 Unmodified _DENIHTSHITQDEFQR_ 0 0 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 657.3058 3 657.304804 1968.89258 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.485 1 93.485 92.985 93.985 0 0 0 0 0.0018533 1 52115 52.172 35.773 1 702 1035 336 379 1143 1143 DEPEDDGYFVPPK 13 1 0 Unmodified _DEPEDDGYFVPPK_ 0 0 0 0 B9EG90;P11387;Q6PK95;Q6NWZ5 B9EG90 B9EG90 TOP1 DNA topoisomerase 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 754.3343 2 754.333004 1506.65145 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.883 1 87.883 87.383 88.383 0 0 0 0 0.011291 1 47872 43.297 24.625 1 703 729 337 380 1144 1144 DEPEDDGYFVPPK 13 1 0 Unmodified _DEPEDDGYFVPPK_ 0 0 0 0 B9EG90;P11387;Q6PK95;Q6NWZ5 B9EG90 B9EG90 TOP1 DNA topoisomerase 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 758.3406 2 754.333004 1506.65145 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.352 1 88.352 87.852 88.852 0 0 0 0 7.0033E-05 1 48210 68.893 46.153 1 704 729 337 380 1145 1145 DEPEEELQK 9 1 0 Unmodified _DEPEEELQK_ 0 0 0 0 J3KQ96;E7ETY2;Q13428;B4DRA2;Q9UFD4;H0YA99 J3KQ96 J3KQ96 TCOF1;DKFZp434G1035 Treacle protein ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 558.7565 2 558.756401 1115.49825 NaN NaN NaN 0.0085043 4.7518E-06 NaN NaN NaN NaN 50.344 0.51137 50.344 50.083 50.594 0 0 0 0 0.017947 1 20274 51.346 32.615 1 NaN NaN 0 3871500 3871500 0 705 792 338 381 1146 1146 DETEFYLGK 9 1 0 Unmodified _DETEFYLGK_ 0 0 0 0 F8WBS5;F8WB72;C9K025;P18077 F8WBS5 F8WBS5 RPL35A 60S ribosomal protein L35a ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 551.2595 2 551.258579 1100.50261 NaN NaN NaN 0.47602 0.00026241 NaN NaN NaN NaN 88.224 0.45228 88.224 87.947 88.4 0 0 0 0 0.00028965 2 48040 77.923 43.919 1 NaN NaN 0 7287200 7287200 0 706 749 339 382 1147;1148 1147 DETEFYLGK 9 1 0 Unmodified _DETEFYLGK_ 0 0 0 0 F8WBS5;F8WB72;C9K025;P18077 F8WBS5 F8WBS5 RPL35A 60S ribosomal protein L35a MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 555.2656 2 551.258579 1100.50261 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.931 1 87.931 87.431 88.431 7.6294E-06 0 0 0 0.01115 1 47902 52.716 28.561 1 707 749 339 382 1149 1149 DETEFYLGKR 10 1 1 Unmodified _DETEFYLGKR_ 0 0 0 1 F8WBS5;F8WB72;C9K025;P18077 F8WBS5 F8WBS5 RPL35A 60S ribosomal protein L35a MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 638.3204 2 629.309135 1256.60372 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.948 1 93.948 93.448 94.448 -7.6294E-06 0 0 0 0.005955 1 52487 71.692 51.363 1 708 749 340 383 1150 1150 DEYEYVSDDGELK 13 1 0 Phospho (STY) _DEYEYVS(ph)DDGELK_ DEYEYVS(1)DDGELK DEY(-63.61)EY(-45.86)VS(45.86)DDGELK 0 0 1 0 O75151;Q8N359;B4DH04 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 821.314 2 821.313823 1640.61309 71636.92 0.83029 0.00068193 -0.0023253 -1.9098E-06 0.82797 0.00068002 821.313974227552 825.320493393373 78.698 0.27975 78.698 78.531 78.811 7.6294E-06 60 26 5 0 0 0 6.8092E-05 2 41293 88.075 68.681 3 0.94011 1.1317 0 16166000 10445000 5720700 709 934 341 384 1151;1152 1152 1592 DEYEYVSDDGELK 13 1 0 Phospho (STY) _DEYEYVS(ph)DDGELK_ DEY(0.001)EY(0.012)VS(0.987)DDGELK DEY(-32.75)EY(-19.08)VS(19.08)DDGELK 0 0 1 0 O75151;Q8N359;B4DH04 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 825.3215 2 821.313823 1640.61309 70841.32 0.93931 0.00077147 0.004862 3.9932E-06 0.94417 0.00077546 821.314257049414 825.822175670372 83.207 0.49557 83.207 82.946 83.441 0 179 46 6 0 0 0 0.01065 1 53264 40.477 33.944 3 1.6313 1.2677 0 12939000 5577700 7361100 710 934 341 384 1153 1153 1592 DEYTFSPGK 9 1 0 Phospho (STY) _DEYTFS(ph)PGK_ DEYTFS(1)PGK DEY(-70.5)T(-33.24)FS(33.24)PGK 0 0 1 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 566.2279 2 562.220812 1122.42707 80425.15 0.52768 0.00029668 -0.23044 -0.00012956 0.29725 0.00016712 562.220574003252 566.227687119824 66.651 1.425 66.651 65.862 67.286 0 524 107 7 0 0 0 4.8464E-05 4 32813 103.34 67.008 3 0.51891 0.64262 0 169170000 107290000 61884000 711 1032 342 385 1154;1155;1156;1157 1157 1862 DEYTFSPGK 9 1 0 Phospho (STY) _DEYTFS(ph)PGK_ DEYT(0.081)FS(0.919)PGK DEY(-33.82)T(-10.55)FS(10.55)PGK 0 0 1 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1131.4518 1 1123.43435 1122.42707 58266.71 0.14301 0.00016066 0.31411 0.00035288 0.45712 0.00051355 1123.43443950593 1131.44926915901 66.577 0.96317 66.577 66.139 67.102 0 199 68 4 0 0 0 0.0053106 1 32272 43.604 35.023 3 0.49378 0.62468 0 31834000 20348000 11486000 712 1032 342 385 1158 1158 1862 DEYTFSPGK 9 1 0 Phospho (STY) _DEYTFS(ph)PGK_ DEYT(0.011)FS(0.988)PGK DEY(-41.55)T(-19.37)FS(19.37)PGK 0 0 1 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 566.2288 2 562.220812 1122.42707 81841.05 0.66377 0.00037318 -0.27564 -0.00015497 0.38813 0.00021821 562.220535737354 566.227831798341 63.476 1.4001 63.476 62.791 64.191 0 568 126 6 0 0 0 0.0029682 2 39708 69.721 39.977 3 0.82874 0.54573 0 30589000 16184000 14406000 713 1032 342 385 1159;1160 1159 1862 DFAAEVVHPGDLK 13 1 0 Unmodified _DFAAEVVHPGDLK_ 0 0 0 0 A0A0C4DGZ5;A0A0S2Z4R1;P54577 A0A0C4DGZ5 A0A0C4DGZ5 YARS Tyrosine--tRNA ligase;Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 703.3644 2 699.356616 1396.69868 NaN NaN NaN NaN NaN NaN NaN NaN NaN 106.27 1 106.27 105.77 106.77 0 0 0 0 3.1126E-05 1 61819 78.342 62.204 1 714 328 343 386 1161 1161 DFATPSLHTSDQSPGK 16 1 0 Phospho (STY) _DFATPSLHTSDQS(ph)PGK_ DFATPSLHTSDQS(1)PGK DFAT(-98.63)PS(-67.2)LHT(-44.03)S(-38.58)DQS(38.58)PGK 0 0 1 0 A0A0A0MTR7;A0A0A0MTC1;Q63HN8 A0A0A0MTR7 A0A0A0MTR7 RNF213 E3 ubiquitin-protein ligase RNF213 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 888.3932 2 884.382906 1766.75126 NaN NaN NaN 0.17951 0.00015876 NaN NaN NaN NaN 76.089 0.8363 76.089 75.718 76.554 0 0 0 0 5.9427E-30 1 39205 115.38 81.597 5 NaN NaN 0 24190000 0 24190000 715 297 344 387 1162 1162 474 DFDREVEIR 9 0 2 Unmodified _DFDREVEIR_ 0 0 0 1 Q53HL2;A8K7A2 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 599.8026 2 589.793652 1177.57275 78838.19 1.2849 0.00075784 0.21752 0.00012829 1.5024 0.00088613 589.793797515617 599.801919152709 91.022 1.0424 91.022 90.479 91.522 0 274 91 6 0 0 0 0.0023184 1 49923 76.282 52.127 1 0.78911 0.98204 0 93707000 48949000 44758000 716 1090 345 388 1163 1163 DFDREVEIR 9 0 2 Unmodified _DFDREVEIR_ 0 0 0 1 Q53HL2;A8K7A2 Q53HL2 Q53HL2 CDCA8 Borealin MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 393.5313 3 393.531527 1177.57275 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.995 1 90.995 90.495 91.495 0 0 0 0 0.00077751 1 50173 68.893 46.807 1 717 1090 345 388 1164 1164 DFFDPVESDEDITNVHDDELDSNK 24 1 0 Phospho (STY) _DFFDPVES(ph)DEDITNVHDDELDSNK_ DFFDPVES(0.825)DEDIT(0.171)NVHDDELDS(0.004)NK DFFDPVES(6.85)DEDIT(-6.85)NVHDDELDS(-22.76)NK 0 0 1 0 O00566;B3KPV5;U3KQ48 O00566 O00566 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 962.0601 3 959.053706 2874.13929 62414.8 0.66326 0.0006361 0.017882 1.715E-05 0.68114 0.00065325 959.388005039043 962.05941863997 117.09 0.7383 117.09 116.78 117.52 0 531 66 10 0 0 0 2.3823E-06 1 70063 43.612 43.612 3 1.1616 1.4525 0 64428000 27956000 36471000 718 917 346 389 1165 1165 1539 DFGAQREEGR 10 0 2 Unmodified _DFGAQREEGR_ 0 0 0 1 P46087;F5GYR3 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 582.7731 2 582.773251 1163.53195 79857.77 0.75004 0.0004371 0.86987 0.00050693 1.6199 0.00094404 582.773159702287 592.782311081269 61.182 0.69677 61.182 60.965 61.662 -3.8147E-06 188 52 6 0 0 0 0.0057595 2 28050 83.948 63.644 1 1.1335 1.4077 0 56586000 24329000 32257000 719 995 347 390 1166;1167 1166 DFHKDEVR 8 1 1 Unmodified _DFHKDEVR_ 0 0 0 1 B4DUT7;Q53F90;A0A140VJK6;P49915 B4DUT7 B4DUT7 GMPS GMP synthase [glutamine-hydrolyzing] MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 355.1812 3 349.173562 1044.49886 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.771 1 79.771 79.271 80.271 0 0 0 0 0.0072012 1 42112 59.245 43.583 1 720 377 348 391 1168 1168 DFQEYVEPGEDFPASPQR 18 0 1 Phospho (STY) _DFQEYVEPGEDFPAS(ph)PQR_ DFQEYVEPGEDFPAS(1)PQR DFQEY(-56.02)VEPGEDFPAS(56.02)PQR 0 0 1 0 C9JGM7;Q6MZE7;B3KM42;E9PHI6;Q9Y6G9 C9JGM7 C9JGM7 DYNC1LI1;DKFZp686A1525 Cytoplasmic dynein 1 light intermediate chain 1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1100.9595 2 1095.95442 2189.89429 NaN NaN NaN -0.27947 -0.00030629 NaN NaN NaN NaN 108.21 0.46413 108.21 107.96 108.42 0 0 0 0 3.4671E-08 1 63394 78.078 65.201 2 NaN NaN 0 9845500 0 9845500 721 567 349 392 1169 1169 946 DFQEYVEPGEDFPASPQRR 19 0 2 Phospho (STY) _DFQEYVEPGEDFPAS(ph)PQRR_ DFQEYVEPGEDFPAS(1)PQRR DFQEY(-41.34)VEPGEDFPAS(41.34)PQRR 0 0 1 1 C9JGM7;Q6MZE7;B3KM42;E9PHI6;Q9Y6G9 C9JGM7 C9JGM7 DYNC1LI1;DKFZp686A1525 Cytoplasmic dynein 1 light intermediate chain 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 783.0033 3 783.005745 2345.99541 68832.08 1.1284 0.00088352 -0.36465 -0.00028553 0.76371 0.00059799 783.339735046524 790.012701073323 105.19 1.1914 105.19 104.72 105.91 0 373 110 7 0 0 0 1.5395E-05 1 67640 49.266 45.662 2 1.0273 0.88773 0 24568000 13391000 11177000 722 567 350 393 1170 1170 946 DFQHLISSPLK 11 1 0 Phospho (STY) _DFQHLISS(ph)PLK_ DFQHLIS(0.163)S(0.837)PLK DFQHLIS(-7.1)S(7.1)PLK 0 0 1 0 B4DZG2;A0A024R8C1;Q15361 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 682.8342 2 682.834135 1363.65372 73944.21 0.68084 0.0004649 -0.31435 -0.00021465 0.36649 0.00025025 682.833818459639 686.840988955903 111.96 1.2153 111.96 111.54 112.75 0 612 108 8 0 0 0 7.4054E-58 3 66641 178.84 148.83 2 0.87782 1.087 0 180070000 93606000 86468000 723 150 351 394 1171;1172;1173 1173 224;225 DFQHLISSPLK 11 1 0 Phospho (STY) _DFQHLISS(ph)PLK_ DFQHLIS(0.164)S(0.836)PLK DFQHLIS(-7.08)S(7.08)PLK 0 0 1 0 B4DZG2;A0A024R8C1;Q15361 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 686.8418 2 682.834135 1363.65372 NaN NaN NaN -0.10127 -6.915E-05 NaN NaN NaN NaN 114.73 1.7369 114.73 114.16 115.9 0 0 0 0 0.00057635 2 74074 79.089 49.084 2 NaN NaN 0 74500000 0 74500000 724 150 351 394 1174;1175 1175 224;225 DFQHLISSPLK 11 1 0 Phospho (STY) _DFQHLIS(ph)SPLK_ DFQHLIS(0.5)S(0.5)PLK DFQHLIS(0)S(0)PLK 0 0 1 0 B4DZG2;A0A024R8C1;Q15361 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 682.8337 2 682.834135 1363.65372 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.24 1 115.24 114.74 115.74 7.6294E-06 0 0 0 0.0043123 1 74221 51.927 40.775 2 725 150 351 394 1176 1176 224;225 DFQHLISSPLKK 12 2 0 Phospho (STY) _DFQHLIS(ph)SPLKK_ DFQHLIS(0.5)S(0.5)PLKK DFQHLIS(0)S(0)PLKK 0 0 1 1 B4DZG2;A0A024R8C1;Q15361 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 754.8965 2 746.881616 1491.74868 72349.26 0.98669 0.00073694 0.063366 4.7327E-05 1.0501 0.00078427 746.881485683438 754.895964597902 97.674 1.1201 97.674 97.017 98.137 0 335 103 6 0 0 0 0.0032974 1 62807 57.106 53.06 2 2.0796 1.6582 0 11916000 3389400 8526700 726 150 352 395 1177 1177 224;225 DFSNSPLHR 9 0 1 Phospho (STY) _DFSNS(ph)PLHR_ DFS(0.001)NS(0.999)PLHR DFS(-29.64)NS(29.64)PLHR 0 0 1 0 A0A024R163;O95758 A0A024R163 A0A024R163 ROD1;PTBP3 Polypyrimidine tract-binding protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 576.7457 2 576.74532 1151.47609 79837.16 0.60177 0.00034707 0.12546 7.2358E-05 0.72723 0.00041942 576.745388747551 581.749375921518 59.214 1.1776 59.214 58.558 59.736 3.8147E-06 441 95 8 0 0 0 3.9937E-05 2 26425 115.91 93.887 2 1.2149 1.5341 0 102480000 44573000 57910000 727 40 353 396 1178;1179 1179 47 DFSNSPLHR 9 0 1 Phospho (STY) _DFSNS(ph)PLHR_ DFS(0.003)NS(0.997)PLHR DFS(-25.47)NS(25.47)PLHR 0 0 1 0 A0A024R163;O95758 A0A024R163 A0A024R163 ROD1;PTBP3 Polypyrimidine tract-binding protein 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 581.7496 2 576.74532 1151.47609 80434.19 0.55813 0.0003219 0.26883 0.00015505 0.82696 0.00047695 576.745534204436 581.749537396444 35.589 0.91985 35.589 35.256 36.176 0 402 74 8 0 0 0 0.0047902 2 19834 66.498 55.592 2 0.9921 0.66686 0 99992000 51738000 48254000 728 40 353 396 1180;1181 1181 47 DFSPEALKK 9 2 0 Phospho (STY) _DFS(ph)PEALKK_ DFS(1)PEALKK DFS(63.32)PEALKK 0 0 1 1 E5RGU4;E5RJT0;Q5BKY2;A0A087WZK9;Q6IB98;Q53HR0;Q53HG0;B3KS98;O15372 E5RGU4 E5RGU4 EIF3H;EIF3S3 Eukaryotic translation initiation factor 3 subunit H MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 565.7778 2 557.762647 1113.51074 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.077 1 72.077 71.577 72.577 0 0 0 0 0.0036665 1 36356 63.32 20.984 1 729 267 354 397 1182 1182 426 DFSPEALKK 9 2 0 Phospho (STY) _DFS(ph)PEALKK_ DFS(1)PEALKK DFS(83.86)PEALKK 0 0 1 1 E5RGU4;E5RJT0;Q5BKY2;A0A087WZK9;Q6IB98;Q53HR0;Q53HG0;B3KS98;O15372 E5RGU4 E5RGU4 EIF3H;EIF3S3 Eukaryotic translation initiation factor 3 subunit H MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 565.7778 2 557.762647 1113.51074 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.29 1 72.29 71.79 72.79 0 0 0 0 0.00021635 1 36518 83.862 33.508 1 730 267 354 397 1183 1183 426 DFSPEALKK 9 2 0 Phospho (STY) _DFS(ph)PEALKK_ DFS(1)PEALKK DFS(54.34)PEALKK 0 0 1 1 E5RGU4;E5RJT0;Q5BKY2;A0A087WZK9;Q6IB98;Q53HR0;Q53HG0;B3KS98;O15372 E5RGU4 E5RGU4 EIF3H;EIF3S3 Eukaryotic translation initiation factor 3 subunit H MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 557.7634 2 557.762647 1113.51074 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.335 1 72.335 71.835 72.835 0 0 0 0 0.0054057 1 36553 54.343 33.043 1 731 267 354 397 1184 1184 426 DFSPEALKK 9 2 0 Phospho (STY) _DFS(ph)PEALKK_ DFS(1)PEALKK DFS(54.49)PEALKK 0 0 1 1 E5RGU4;E5RJT0;Q5BKY2;A0A087WZK9;Q6IB98;Q53HR0;Q53HG0;B3KS98;O15372 E5RGU4 E5RGU4 EIF3H;EIF3S3 Eukaryotic translation initiation factor 3 subunit H MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 565.7781 2 557.762647 1113.51074 81258.32 0.90663 0.00050569 -0.0024404 -1.3612E-06 0.90419 0.00050433 557.76218979584 565.776636096473 57.028 1.4769 57.028 56.314 57.791 0 370 128 4 0 0 0 0.0048394 2 34904 54.486 44.499 1 0.89619 0.74045 0 19126000 8175600 10950000 732 267 354 397 1185;1186 1186 426 DFSPHYVPDNYK 12 1 0 Phospho (STY) _DFS(ph)PHYVPDNYK_ DFS(0.999)PHY(0.001)VPDNYK DFS(30.05)PHY(-30.05)VPDNY(-40.71)K 0 0 1 0 Q9NR48 Q9NR48 Q9NR48 ASH1L Histone-lysine N-methyltransferase ASH1L MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 781.3487 2 781.321589 1560.62862 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.841 1 85.841 85.341 86.341 0 0 0 0 0.011967 1 46418 42.209 21.546 3 733 1215 355 398 1187 1187 2443 DFSPHYVPDNYK 12 1 0 Phospho (STY) _DFS(ph)PHYVPDNYK_ DFS(1)PHYVPDNYK DFS(53.99)PHY(-53.99)VPDNY(-86.26)K 0 0 1 0 Q9NR48 Q9NR48 Q9NR48 ASH1L Histone-lysine N-methyltransferase ASH1L MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 785.3293 2 781.321589 1560.62862 70884.47 1.0607 0.00082874 0.48415 0.00037828 1.5449 0.001207 781.823285904942 785.328631265866 82.014 0.59222 82.014 81.77 82.363 0 256 55 7 0 0 0 6.9436E-05 1 52494 90.412 72.593 3 1.4457 0.99503 0 24433000 10368000 14065000 734 1215 355 398 1188 1188 2443 DFSPLQTQTFNR 12 0 1 Phospho (STY) _DFS(ph)PLQTQTFNR_ DFS(1)PLQTQTFNR DFS(58.2)PLQT(-58.2)QT(-75.63)FNR 0 0 1 0 Q6P4F7 Q6P4F7 Q6P4F7 ARHGAP11A Rho GTPase-activating protein 11A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 772.3423 2 767.340313 1532.66607 69341.92 1.4597 0.0011201 0.59474 0.00045637 2.0544 0.0015764 767.340526559306 772.344537167949 102.01 1.2509 102.01 101.45 102.7 0 384 100 6 0 0 0 9.0535E-14 2 58959 113.65 85.907 3 1.4121 1.7454 0 33527000 11963000 21564000 735 1122 356 399 1189;1190 1190 2134 DFTDLIVINEDRK 13 1 1 Unmodified _DFTDLIVINEDRK_ 0 0 0 1 Q9H9Y2 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 789.4144 2 789.41212 1576.80969 NaN NaN NaN 0.39767 0.00031392 NaN NaN NaN NaN 121.36 0.30954 121.36 121.1 121.41 -7.6294E-06 0 0 0 0.0003757 1 73238 97.734 76.362 1 NaN NaN 0 2469200 2469200 0 736 1209 357 400 1191 1191 DFTVSAMHGDMDQK 14 1 0 2 Oxidation (M) _DFTVSAM(ox)HGDM(ox)DQK_ DFTVSAM(1)HGDM(1)DQK DFTVSAM(142.47)HGDM(142.47)DQK 0 2 0 0 B4DNH2;J3KSZ0;J3KT12;A8K7F6;A8K088;P60842;J3QL52 B4DNH2 B4DNH2 EIF4A1 Eukaryotic initiation factor 4A-I MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 811.3399 2 807.332155 1612.64976 66457.84 0.75557 0.00060999 -0.43894 -0.00035437 0.31662 0.00025562 807.332638464779 811.33949100043 64.762 0.49271 64.762 64.462 64.955 0 243 36 9 0 0 0 1.0511E-33 2 30818 142.47 113.51 1 4.2263 5.255 0 85204000 17375000 67829000 737 439 358 401 1192;1193 1192 113;114 DFVAEPMGEK 10 1 0 Oxidation (M) _DFVAEPM(ox)GEK_ DFVAEPM(1)GEK DFVAEPM(68.85)GEK 0 1 0 0 A0A024R5H0;O75531;E9PJJ8 A0A024R5H0 A0A024R5H0 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 573.765 2 569.757889 1137.50123 81118.61 0.55541 0.00031645 0.043521 2.4796E-05 0.59893 0.00034124 569.757823809382 573.765440498573 61.221 1.1415 61.221 60.787 61.928 0 295 81 7 0 0 0 0.0091405 3 28381 68.846 59.933 1 1.005 1.2618 0 28082000 13740000 14342000 738 107 359 402 1194;1195;1196 1194 21 DFVAPHLAQPTGSQSPPPGSK 21 1 0 Phospho (STY) _DFVAPHLAQPTGS(ph)QSPPPGSK_ DFVAPHLAQPT(0.104)GS(0.528)QS(0.36)PPPGS(0.008)K DFVAPHLAQPT(-7.05)GS(1.66)QS(-1.66)PPPGS(-18.25)K 0 0 1 0 H7C4R5;B3KRS4;B3KMT3;B3KM73;D3DVL7;B4DU42;Q969Z0 H7C4R5 H7C4R5 TBRG4 Protein TBRG4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 736.0193 3 733.347442 2197.0205 71634.41 1.3167 0.0009656 -0.28011 -0.00020541 1.0366 0.00076018 733.681780772949 736.01863737947 90.242 0.88972 90.242 89.716 90.606 0 336 78 6 0 0 0 1.0706E-06 2 49721 48.759 48.759 4 0.85296 1.0706 0 56352000 29395000 26957000 739 570 360 403 1197;1198 1198 948 DFVEDDTTHG 10 0 0 Unmodified _DFVEDDTTHG_ 0 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 ISO-MSMS -1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 568.2313 2 568.23055 1134.44655 NaN NaN NaN 0.084013 4.7738E-05 NaN NaN NaN NaN 57.932 0.47556 57.932 57.676 58.152 0 0 0 0 0.027226 1 25395 47.849 38.261 1 740 514 361 404 1199 1199 DGARPDVTESESGSPEYR 18 0 2 Unmodified _DGARPDVTESESGSPEYR_ 0 0 0 1 B2R7C7;P10696;P05187 B2R7C7 B2R7C7 ALPPL2;ALPP Alkaline phosphatase;Alkaline phosphatase, placental-like;Alkaline phosphatase, placental type MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 651.2937 3 651.292452 1950.85553 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.856 1 64.856 64.356 65.356 0 0 0 0 1.4107E-06 1 31013 50.226 28.979 1 741 537 362 405 1200 1200 DGDESSPILTSFELVK 16 1 0 Phospho (STY) _DGDES(ph)SPILTSFELVK_ DGDES(0.498)S(0.498)PILT(0.004)S(0.001)FELVK DGDES(0)S(0)PILT(-21.07)S(-27.36)FELVK 0 0 1 0 B4DPV9;A8MYT4;Q8NEB9 B4DPV9 B4DPV9 PIK3C3 Phosphatidylinositol 3-kinase;Phosphatidylinositol 3-kinase catalytic subunit type 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 909.4193 2 908.916247 1815.81794 63197.94 0.74833 0.00068017 0.51813 0.00047093 1.2665 0.0011511 909.417661511699 912.92374073663 130.79 0.41888 130.79 130.54 130.96 -1.5259E-05 86 38 4 0 0 0 0.00043377 1 79638 44.299 37.64 4 1.3316 1.5792 0 8294000 3446100 4847800 742 512 363 406 1201 1201 877;878 DGDGVPGGGPLSPAR 15 0 1 Phospho (STY) _DGDGVPGGGPLS(ph)PAR_ DGDGVPGGGPLS(1)PAR DGDGVPGGGPLS(61.65)PAR 0 0 1 0 A0A024R0R1;M0QZR4;Q92888 A0A024R0R1 A0A024R0R1 ARHGEF1 Rho guanine nucleotide exchange factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 716.3162 2 716.316838 1430.61912 72277.16 0.59436 0.00042575 0.27298 0.00019554 0.86734 0.00062129 716.317003899725 721.32104654127 72.847 1.0925 72.847 72.335 73.427 0 463 90 7 0 0 0 0.001035 2 37223 61.649 56.855 1 0.83955 1.0598 0 90365000 50744000 39621000 743 32 364 407 1202;1203 1203 37 DGDGVPGGGPLSPAR 15 0 1 Phospho (STY) _DGDGVPGGGPLS(ph)PAR_ DGDGVPGGGPLS(1)PAR DGDGVPGGGPLS(67.33)PAR 0 0 1 0 A0A024R0R1;M0QZR4;Q92888 A0A024R0R1 A0A024R0R1 ARHGEF1 Rho guanine nucleotide exchange factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 716.3177 2 716.316838 1430.61912 72705.71 1.0235 0.00073313 0.11274 8.0757E-05 1.1362 0.00081388 716.316902702985 721.32101721488 74.436 1.1616 74.436 73.77 74.931 0 478 100 7 0 0 0 0.00060981 1 47509 67.326 63.439 1 0.62574 0.43493 0 39350000 24259000 15091000 744 32 364 407 1204 1204 37 DGDKSPMSSLQISNEK 16 2 0 Oxidation (M),Phospho (STY) _DGDKS(ph)PM(ox)SSLQISNEK_ DGDKSPM(1)SSLQISNEK DGDKS(0.909)PMS(0.046)S(0.046)LQISNEK DGDKSPM(42.34)SSLQISNEK DGDKS(13)PMS(-13)S(-13)LQIS(-36.91)NEK 0 1 1 1 Q53F85;B2R7M0;A8K822;A0A024RCS3;B4E1C1;Q9UER7 Q53F85 Q53F85 DAXX Death domain-associated protein 6 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 924.4057 2 916.392613 1830.77067 62665.36 0.95982 0.00087957 -0.8999 -0.00082466 0.05992 5.4911E-05 916.391945218009 924.406768249338 43.659 0.89199 43.659 43.166 44.058 0 347 78 6 0 0 0 0.0012835 1 25699 42.338 36.731 4 0.42975 0.3524 0 22756000 13722000 9033300 745 215 365 408 1205 1205 52 335;336 DGETLEGSDAEESLDK 16 1 0 2 Phospho (STY) _DGETLEGS(ph)DAEES(ph)LDK_ DGET(0.022)LEGS(0.979)DAEES(0.999)LDK DGET(-16.59)LEGS(16.59)DAEES(30.32)LDK 0 0 2 0 B4DIS0;A0A024R7V7;Q9P2D1 B4DIS0 B4DIS0 CHD7 Chromodomain-helicase-DNA-binding protein 7 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 928.333 2 927.831924 1853.64929 NaN NaN NaN 0.21235 0.00019702 NaN NaN NaN NaN 64.478 0.55186 64.478 64.169 64.72 0 0 0 0 0.00052833 1 30727 47 37.697 3 NaN NaN 0 6459700 6459700 0 746 142 366 409 1206 1206 212;213 DGETLEGSDAEESLDK 16 1 0 Phospho (STY) _DGETLEGS(ph)DAEESLDK_ DGET(0.001)LEGS(0.972)DAEES(0.027)LDK DGET(-30.53)LEGS(15.57)DAEES(-15.57)LDK 0 0 1 0 B4DIS0;A0A024R7V7;Q9P2D1 B4DIS0 B4DIS0 CHD7 Chromodomain-helicase-DNA-binding protein 7 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 891.859 2 887.848759 1773.68296 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.985 1 67.985 67.485 68.485 0 0 0 0 0.001056 1 33586 46.89 36.936 3 747 142 366 410 1207 1207 212;213 DGFHIR 6 0 1 Unmodified _DGFHIR_ 0 0 0 0 F8W7C6;A0A087WV22;X1WI28;X5D2T3;P27635;B8A6G2;X5D2W5;A6QRI9 F8W7C6 F8W7C6 RPL10 60S ribosomal protein L10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 372.6929 2 372.693013 743.371472 98223.51 -0.0094315 -3.5151E-06 0.11175 4.1649E-05 0.10232 3.8134E-05 372.692975825683 377.697079220432 87.724 5.1322 87.724 85.372 90.505 0 1103 471 4 0 0 0 0.017995 1 46909 103.7 42.373 1 0.91624 1.1578 0 157300000 80079000 77219000 748 253 367 411 1208 1208 DGFHIR 6 0 1 Unmodified _DGFHIR_ 0 0 0 0 F8W7C6;A0A087WV22;X1WI28;X5D2T3;P27635;B8A6G2;X5D2W5;A6QRI9 F8W7C6 F8W7C6 RPL10 60S ribosomal protein L10 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 372.6927 2 372.693013 743.371472 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.594 1 89.594 89.094 90.094 7.6294E-06 0 0 0 1.1917E-05 1 49132 97.926 30.635 1 749 253 367 411 1209 1209 DGIDDESYGQIFKPIISK 18 2 0 Unmodified _DGIDDESYGQIFKPIISK_ 0 0 0 1 B3KUJ5;Q92769 B3KUJ5 B3KUJ5 HDAC2 Histone deacetylase;Histone deacetylase 2 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 681.0214 3 675.677355 2024.01024 NaN NaN NaN -0.282 -0.00019054 NaN NaN NaN NaN 121.16 0.40703 121.16 121.03 121.44 0 0 0 0 0.031801 1 78351 34.174 24.386 1 NaN NaN 0 3505500 0 3505500 750 601 368 412 1210 1210 DGKFSPIQEK 10 2 0 Phospho (STY) _DGKFS(ph)PIQEK_ DGKFS(1)PIQEK DGKFS(184.11)PIQEK 0 0 1 1 O43683;A0JLU2;A8K5A6;B4DYG2 O43683 O43683 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 622.7982 2 614.784111 1227.55367 77306.55 0.57929 0.00035614 0.12009 7.383E-05 0.69938 0.00042997 614.784181384062 622.798225691726 63.25 2.0267 63.25 61.679 63.706 3.8147E-06 904 157 9 0 0 0 3.4574E-53 5 29211 184.11 118.83 1 0.71907 0.94814 0 282250000 164400000 117850000 751 926 369 413 1211;1212;1213;1214;1215 1213 1556 DGKFSPIQEK 10 2 0 Phospho (STY) _DGKFS(ph)PIQEK_ DGKFS(1)PIQEK DGKFS(72.34)PIQEK 0 0 1 1 O43683;A0JLU2;A8K5A6;B4DYG2 O43683 O43683 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 623.2549 2 614.784111 1227.55367 NaN NaN NaN 0.8105 0.00049828 NaN NaN NaN NaN 63.72 0.27104 63.72 63.653 63.924 0 0 0 0 0.0024938 1 30055 72.34 47.417 1 NaN NaN 0 5628200 0 5628200 752 926 369 413 1216 1216 1556 DGKFSPIQEK 10 2 0 Phospho (STY) _DGKFS(ph)PIQEK_ DGKFS(1)PIQEK DGKFS(98.34)PIQEK 0 0 1 1 O43683;A0JLU2;A8K5A6;B4DYG2 O43683 O43683 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 622.7984 2 614.784111 1227.55367 76017.2 0.93092 0.00057231 -0.03786 -2.3276E-05 0.89306 0.00054904 614.784271249758 622.798260350574 39.502 1.6632 39.502 39.241 40.904 0 723 150 10 0 0 0 9.0588E-06 2 22707 98.337 70.881 1 1.1289 0.82077 0 842080000 365690000 476390000 753 926 369 413 1217;1218 1217 1556 DGKFSPIQEK 10 2 0 Phospho (STY) _DGKFS(ph)PIQEK_ DGKFS(1)PIQEK DGKFS(55.9)PIQEK 0 0 1 1 O43683;A0JLU2;A8K5A6;B4DYG2 O43683 O43683 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 622.7991 2 614.784111 1227.55367 78607.23 0.74755 0.00045958 -0.082474 -5.0704E-05 0.66507 0.00040888 614.784095108073 622.798346626134 47.235 0.77747 47.235 46.811 47.588 0 191 72 5 0 0 0 0.0069114 1 28221 55.899 34.33 1 1.1786 0.93829 0 6963000 3456800 3506300 754 926 369 413 1219 1219 1556 DGLNQTTIPVSPPSTTK 17 1 0 Phospho (STY) _DGLNQTTIPVS(ph)PPSTTK_ DGLNQT(0.001)T(0.045)IPVS(0.706)PPS(0.083)T(0.083)T(0.083)K DGLNQT(-30.73)T(-11.94)IPVS(9.31)PPS(-9.31)T(-9.31)T(-9.31)K 0 0 1 0 X6RLN4;Q71RC2 X6RLN4 X6RLN4 LARP4 La-related protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 922.4504 2 918.442963 1834.87137 65026.15 0.63387 0.00058217 0.53881 0.00049486 1.1727 0.001077 918.443368138814 922.450679127886 95.237 0.95347 95.237 94.803 95.757 0 414 83 7 0 0 0 4.0448E-12 2 53443 95.767 95.767 6 1.8375 2.3053 0 57366000 18240000 39126000 755 1131 370 414 1220;1221 1221 2164 DGLTNAGELESDSGSDK 17 1 0 Phospho (STY) _DGLTNAGELESDSGS(ph)DK_ DGLTNAGELESDS(0.05)GS(0.95)DK DGLT(-98.02)NAGELES(-41.85)DS(-12.83)GS(12.83)DK 0 0 1 0 Q5T8Z2;Q6IB93;Q5U0M5;R4GMX3;P35226 Q5T8Z2 Q5T8Z2 BMI1;COMMD3;COMMD3-BMI1 Polycomb complex protein BMI-1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 891.8621 2 887.854375 1773.6942 NaN NaN NaN -0.10788 -9.578E-05 NaN NaN NaN NaN 66.74 0.73933 66.74 66.281 67.021 0 0 0 0 2.2797E-41 1 32335 132.51 108.31 4 NaN NaN 0 14987000 0 14987000 756 985 371 415 1222 1222 1741;1742;1743 DGLTNAGELESDSGSDK 17 1 0 Phospho (STY) _DGLTNAGELESDS(ph)GSDK_ DGLTNAGELES(0.028)DS(0.486)GS(0.486)DK DGLT(-57.08)NAGELES(-12.37)DS(0)GS(0)DK 0 0 1 0 Q5T8Z2;Q6IB93;Q5U0M5;R4GMX3;P35226 Q5T8Z2 Q5T8Z2 BMI1;COMMD3;COMMD3-BMI1 Polycomb complex protein BMI-1 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 891.862 2 887.854375 1773.6942 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.575 1 67.575 67.075 68.075 0 0 0 0 5.2838E-06 1 42324 63.46 44.637 4 757 985 371 415 1223 1223 1741;1742;1743 DGLTNAGELESDSGSDK 17 1 0 3 Phospho (STY) _DGLTNAGELES(ph)DS(ph)GS(ph)DK_ DGLT(0.001)NAGELES(1)DS(1)GS(1)DK DGLT(-34.31)NAGELES(34.31)DS(34.31)GS(36.71)DK 0 0 3 0 Q5T8Z2;Q6IB93;Q5U0M5;R4GMX3;P35226 Q5T8Z2 Q5T8Z2 BMI1;COMMD3;COMMD3-BMI1 Polycomb complex protein BMI-1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 971.8287 2 967.820706 1933.62686 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.329 1 69.329 68.829 69.829 0 0 0 0 0.00084499 1 34512 43.37 25.005 4 758 985 371 416 1224 1224 1741;1742;1743 DGLTNAGELESDSGSDK 17 1 0 3 Phospho (STY) _DGLTNAGELES(ph)DS(ph)GS(ph)DK_ DGLTNAGELES(1)DS(1)GS(1)DK DGLT(-40.2)NAGELES(40.2)DS(46.56)GS(50.64)DK 0 0 3 0 Q5T8Z2;Q6IB93;Q5U0M5;R4GMX3;P35226 Q5T8Z2 Q5T8Z2 BMI1;COMMD3;COMMD3-BMI1 Polycomb complex protein BMI-1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 971.8279 2 967.820706 1933.62686 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.093 1 70.093 69.593 70.593 0 0 0 0 3.7983E-05 1 34996 61.477 33.829 4 759 985 371 416 1225 1225 1741;1742;1743 DGNPDNETYLHR 12 0 1 Unmodified _DGNPDNETYLHR_ 0 0 0 0 I3L0H8;Q2NL95;Q9HBZ9;Q7Z4W5;Q53G16;F6QDS0;A0A0U4B4U6;H3BQK0;Q9NUU7;Q9UMR2;Q59FQ9;Q68DY7;B4DL69;Q69YM2;A0A024QZ90;I3L352 I3L0H8 I3L0H8 DDX19A;DDX19B;DKFZp686C21137;hCG_1998531;DKFZp762C1313 ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 720.822 2 715.818387 1429.62222 70882.11 0.67121 0.00048047 -0.099512 -7.1233E-05 0.5717 0.00040924 715.818597017657 720.822465598337 65.449 0.37016 65.449 65.232 65.602 0 128 27 6 0 0 0 1.0776E-52 2 31414 173.32 151.24 1 2.4655 3.103 0 48842000 13054000 35788000 760 370 372 417 1226;1227 1226 DGQVINETSQHHDDLE 16 0 0 Phospho (STY) _DGQVINETS(ph)QHHDDLE_ DGQVINET(0.022)S(0.978)QHHDDLE DGQVINET(-16.57)S(16.57)QHHDDLE 0 0 1 0 V9HWE1;Q53HU8;P08670 V9HWE1 V9HWE1 HEL113;VIM Vimentin ISO-MSMS -1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 958.8873 2 958.886541 1915.75853 NaN NaN NaN 0.014645 1.4043E-05 NaN NaN NaN NaN 61.772 1.9698 61.772 60.472 62.442 3.8147E-06 0 0 0 3.7637E-40 1 28399 125.28 105.56 2 761 960 373 418 1228 1228 1684 DGQVINETSQHHDDLE 16 0 0 Phospho (STY) _DGQVINETS(ph)QHHDDLE_ DGQVINET(0.445)S(0.555)QHHDDLE DGQVINET(-0.96)S(0.96)QHHDDLE 0 0 1 0 V9HWE1;Q53HU8;P08670 V9HWE1 V9HWE1 HEL113;VIM Vimentin ISO-MSMS -1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 958.8882 2 958.886541 1915.75853 NaN NaN NaN 0.24878 0.00023855 NaN NaN NaN NaN 48.168 2.166 48.168 47.249 49.415 3.8147E-06 0 0 0 1.8693E-06 1 28868 62.055 47.494 2 762 960 373 418 1229 1229 1684 DGQVINETSQHHDDLE 16 0 0 Phospho (STY) _DGQVINETS(ph)QHHDDLE_ DGQVINET(0.477)S(0.523)QHHDDLE DGQVINET(-0.4)S(0.4)QHHDDLE 0 0 1 0 V9HWE1;Q53HU8;P08670 V9HWE1 V9HWE1 HEL113;VIM Vimentin ISO-MSMS -1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 639.5941 3 639.593453 1915.75853 NaN NaN NaN 0.10509 6.7216E-05 NaN NaN NaN NaN 48.196 2.5266 48.196 47.15 49.676 0 0 0 0 5.0996E-05 1 29439 54.764 41.713 2 763 960 373 418 1230 1230 1684 DGQVINETSQHHDDLE 16 0 0 Unmodified _DGQVINETSQHHDDLE_ 0 0 0 0 V9HWE1;Q53HU8;P08670 V9HWE1 V9HWE1 HEL113;VIM Vimentin ISO-MSMS -1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 612.9381 3 612.938009 1835.7922 NaN NaN NaN -0.10471 -6.4178E-05 NaN NaN NaN NaN 71.948 0.82584 71.948 71.549 72.375 7.6294E-06 0 0 0 4.3408E-06 2 36036 42.314 30.522 1 764 960 373 419 1231;1232 1231 DGQVINETSQHHDDLE 16 0 0 Unmodified _DGQVINETSQHHDDLE_ 0 0 0 0 V9HWE1;Q53HU8;P08670 V9HWE1 V9HWE1 HEL113;VIM Vimentin ISO-MSMS -1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 918.9038 2 918.903376 1835.7922 NaN NaN NaN 0.22858 0.00021005 NaN NaN NaN NaN 71.944 0.79143 71.944 71.609 72.401 0 0 0 0 3.4576E-07 1 36072 77.185 52.331 1 765 960 373 419 1233 1233 DGSLEDDEDEEDDLDEGVGGK 21 1 0 Phospho (STY) _DGS(ph)LEDDEDEEDDLDEGVGGK_ DGS(1)LEDDEDEEDDLDEGVGGK DGS(76.77)LEDDEDEEDDLDEGVGGK 0 0 1 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1159.4196 2 1159.4212 2316.82785 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.474 1 77.474 76.974 77.974 0 0 0 0 4.6028E-11 1 40392 76.768 71.275 1 766 1044 374 420 1234 1234 1945 DGSLEDDEDEEDDLDEGVGGK 21 1 0 Phospho (STY) _DGS(ph)LEDDEDEEDDLDEGVGGK_ DGS(1)LEDDEDEEDDLDEGVGGK DGS(52.18)LEDDEDEEDDLDEGVGGK 0 0 1 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1163.4294 2 1159.4212 2316.82785 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.527 1 77.527 77.027 78.027 0 0 0 0 0.00032803 1 40429 52.185 42.902 1 767 1044 374 420 1235 1235 1945 DGSSPPLLEK 10 1 0 Phospho (STY) _DGSS(ph)PPLLEK_ DGS(0.054)S(0.946)PPLLEK DGS(-12.39)S(12.39)PPLLEK 0 0 1 0 E3UVQ2;H9A532;Q6W2J9;H7BYY2 E3UVQ2 E3UVQ2 BCOR-RARA;BCOR BCL-6 corepressor ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 565.7655 2 561.757562 1121.50057 NaN NaN NaN -0.22109 -0.0001242 NaN NaN NaN NaN 70.967 0.46838 70.967 70.551 71.019 0 0 0 0 0.012001 1 35486 58.274 39.491 2 NaN NaN 0 10219000 0 10219000 768 781 375 421 1236 1236 1323 DGSSPPLLEK 10 1 0 Phospho (STY) _DGSS(ph)PPLLEK_ DGS(0.034)S(0.966)PPLLEK DGS(-14.52)S(14.52)PPLLEK 0 0 1 0 E3UVQ2;H9A532;Q6W2J9;H7BYY2 E3UVQ2 E3UVQ2 BCOR-RARA;BCOR BCL-6 corepressor ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 561.7581 2 561.757562 1121.50057 NaN NaN NaN 0.2553 0.00014342 NaN NaN NaN NaN 71.098 0.31738 71.098 70.987 71.305 0 0 0 0 0.00037005 1 35747 76.332 42.781 2 NaN NaN 0 11545000 11545000 0 769 781 375 421 1237 1237 1323 DGSSPPLLEK 10 1 0 Phospho (STY) _DGSS(ph)PPLLEK_ DGS(0.026)S(0.974)PPLLEK DGS(-15.8)S(15.8)PPLLEK 0 0 1 0 E3UVQ2;H9A532;Q6W2J9;H7BYY2 E3UVQ2 E3UVQ2 BCOR-RARA;BCOR BCL-6 corepressor MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 561.7585 2 561.757562 1121.50057 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.47 1 70.47 69.97 70.97 0 0 0 0 0.00093604 1 35229 72.2 45.598 2 770 781 375 421 1238 1238 1323 DGTSPEEEIEIER 13 0 1 Phospho (STY) _DGTS(ph)PEEEIEIER_ DGT(0.158)S(0.842)PEEEIEIER DGT(-7.26)S(7.26)PEEEIEIER 0 0 1 0 Q9H501 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 792.3276 2 792.327265 1582.63998 68182.99 0.96022 0.00076081 0.1094 8.668E-05 1.0696 0.00084749 792.327377756529 797.331336461645 82.103 1.2834 82.103 81.399 82.683 0 758 121 8 0 0 0 3.5653E-16 2 43891 119.69 92.552 2 1.0203 1.29 0 211620000 104610000 107010000 771 1206 376 422 1239;1240 1239 2400;2984 DGTSPEEEIEIER 13 0 1 2 Phospho (STY) _DGT(ph)S(ph)PEEEIEIER_ DGT(1)S(1)PEEEIEIER DGT(45.83)S(45.83)PEEEIEIER 0 0 2 0 Q9H501 Q9H501 Q9H501 ESF1 ESF1 homolog ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 832.3108 2 832.31043 1662.60631 NaN NaN NaN 0.44718 0.00037219 NaN NaN NaN NaN 88.132 0.47136 88.132 87.867 88.339 0 0 0 0 0.003665 1 47998 45.829 30.257 1 NaN NaN 0 7941900 7941900 0 772 1206 376 423 1241 1241 2400;2984 DGTSPEEEIEIER 13 0 1 2 Phospho (STY) _DGT(ph)S(ph)PEEEIEIER_ DGT(1)S(1)PEEEIEIER DGT(44.3)S(44.3)PEEEIEIER 0 0 2 0 Q9H501 Q9H501 Q9H501 ESF1 ESF1 homolog MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 837.316 2 832.31043 1662.60631 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.129 1 88.129 87.629 88.629 0 0 0 0 0.0053159 1 48056 44.299 30.53 1 773 1206 376 423 1242 1242 2400;2984 DGVFLYFEDNAGVIVNNK 18 1 0 Unmodified _DGVFLYFEDNAGVIVNNK_ 0 0 0 0 J3KTJ3;J3KT29;Q9BTQ7;A0A024R1Q8;P62829 J3KTJ3 J3KTJ3 RPL23 60S ribosomal protein L23 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1012.0098 2 1007.49945 2012.98436 59662.49 0.46899 0.00047251 -0.5846 -0.00058898 -0.11561 -0.00011647 1007.99959878953 1012.00661989918 133.41 0.26633 133.41 133.33 133.6 0 57 11 10 0 0 0 1.4269E-52 1 81201 155.86 155.86 1 0.69148 0.86321 0 68328000 39997000 28331000 774 51 377 424 1243 1243 DGVLTLANNVTPAK 14 1 0 Phospho (STY) _DGVLTLANNVT(ph)PAK_ DGVLTLANNVT(1)PAK DGVLT(-40.51)LANNVT(40.51)PAK 0 0 1 0 E7EVA0;P27816;B4DM10 E7EVA0 E7EVA0 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 746.8737 2 746.873988 1491.73342 NaN NaN NaN 0.12726 9.5048E-05 NaN NaN NaN NaN 99.674 0.67191 99.674 99.428 100.1 0 0 0 0 8.1136E-05 1 56803 83.54 52.976 2 NaN NaN 0 21092000 21092000 0 775 793 378 425 1244 1244 2824 DGYDYDGYR 9 0 1 Unmodified _DGYDYDGYR_ 0 0 0 0 J3KTL2;Q07955;A8K1L8;Q59FA2 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 562.2211 2 562.219985 1122.42542 NaN NaN NaN 2.1697 0.0012198 NaN NaN NaN NaN 63.202 1.1203 63.202 62.346 63.467 0 0 0 0 1.7699E-17 1 29527 114.5 95.519 1 NaN NaN 0 18593000 18593000 0 776 895 379 426 1245 1245 DHALLEEQSK 10 1 0 Unmodified _DHALLEEQSK_ 0 0 0 0 H7C144;F5GXS2;Q96BG6;A0A0S2Z3G9;O43707 H7C144 H7C144 ACTN4 Alpha-actinin-4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 390.5315 3 390.531415 1168.57242 95603.86 -0.25037 -9.7777E-05 0.20101 7.8501E-05 -0.049357 -1.9275E-05 390.531508297961 393.202816110136 65.18 0.36705 65.18 64.984 65.351 0 140 26 7 0 0 0 0.026371 1 31194 21.372 1.1655 1 0.90699 1.1231 0 176090000 94098000 81992000 777 345 380 427 1246 1246 DHASIQMNVAEVDK 14 1 0 Oxidation (M) _DHASIQM(ox)NVAEVDK_ DHASIQM(1)NVAEVDK DHASIQM(100.11)NVAEVDK 0 1 0 0 Q8WVC2;Q6FGH5;Q9BYK1;P63220 Q8WVC2 Q8WVC2 RPS21 40S ribosomal protein S21 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 790.8775 2 786.869762 1571.72497 68817.09 0.93564 0.00073622 -0.22377 -0.00017608 0.71186 0.00056014 786.869812143628 790.87692180201 76.45 0.65559 76.45 76.126 76.781 -7.6294E-06 243 56 6 0 0 0 1.4048E-08 2 39463 100.11 81.976 1 2.2177 2.7997 0 47350000 14504000 32846000 778 1023 381 428 1247;1248 1247 293 DHASIQMNVAEVDK 14 1 0 Oxidation (M) _DHASIQM(ox)NVAEVDK_ DHASIQM(1)NVAEVDK DHASIQM(97.42)NVAEVDK 0 1 0 0 Q8WVC2;Q6FGH5;Q9BYK1;P63220 Q8WVC2 Q8WVC2 RPS21 40S ribosomal protein S21 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 527.5886 3 524.9156 1571.72497 NaN NaN NaN 0.94949 0.0004984 NaN NaN NaN NaN 76.397 0.60043 76.397 76.114 76.715 0 0 0 0 6.0101E-12 2 39624 97.417 75.86 1 NaN NaN 0 18632000 0 18632000 779 1023 381 428 1249;1250 1250 293 DHASQLSPVLSR 12 0 1 Phospho (STY) _DHASQLS(ph)PVLSR_ DHAS(0.004)QLS(0.975)PVLS(0.021)R DHAS(-24.19)QLS(16.65)PVLS(-16.65)R 0 0 1 0 A0A0J9YYE2;Q8IXZ2 A0A0J9YYE2 A0A0J9YYE2 ZC3H3 Zinc finger CCCH domain-containing protein 3 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 695.3288 2 695.329748 1388.64494 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.132 1 79.132 78.632 79.632 0 0 0 0 0.0017992 1 41641 87.083 63.334 3 780 341 382 429 1251 1251 535 DHAVVVGVYRPPPK 14 1 1 Unmodified _DHAVVVGVYRPPPK_ 0 0 0 1 Q96BS4;P22087 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 517.9636 3 511.956059 1532.84635 81853.64 0.42494 0.00021755 -0.11235 -5.752E-05 0.31259 0.00016003 511.956066606081 517.96350642561 108.68 1.5933 108.68 107.99 109.58 0 781 125 8 0 0 0 1.1542E-74 4 63950 176.25 166.19 1 0.71461 0.86306 0 239290000 137090000 102200000 781 974 383 430 1252;1253;1254;1255 1255 DHAVVVGVYRPPPK 14 1 1 Unmodified _DHAVVVGVYRPPPK_ 0 0 0 1 Q96BS4;P22087 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 767.4312 2 767.43045 1532.84635 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.39 1 108.39 107.89 108.89 -7.6294E-06 0 0 0 0.00018631 1 63525 73.067 48.212 1 782 974 383 430 1256 1256 DHAVVVGVYRPPPK 14 1 1 Unmodified _DHAVVVGVYRPPPK_ 0 0 0 1 Q96BS4;P22087 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 511.9554 3 511.956059 1532.84635 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.71 1 109.71 109.21 110.21 7.6294E-06 0 0 0 1.1951E-05 1 64600 61.423 48.222 1 783 974 383 430 1257 1257 DHAVVVGVYRPPPK 14 1 1 Unmodified _DHAVVVGVYRPPPK_ 0 0 0 1 Q96BS4;P22087 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 511.9558 3 511.956059 1532.84635 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.49 1 110.49 109.99 110.99 0 0 0 0 0.0011934 1 65214 45.115 37.332 1 784 974 383 430 1258 1258 DHAVVVGVYRPPPK 14 1 1 Unmodified _DHAVVVGVYRPPPK_ 0 0 0 1 Q96BS4;P22087 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 511.9566 3 511.956059 1532.84635 86593.09 0.67914 0.00034769 -0.43705 -0.00022375 0.24208 0.00012394 511.956006494759 517.963204582731 64.469 0.28096 64.469 64.278 64.559 0 67 24 5 0 0 0 1.5605E-05 1 40206 84.753 79.474 1 0.7376 0.63241 0 7354000 2894800 4459100 785 974 383 430 1259 1259 DHHQPLGR 8 0 1 Unmodified _DHHQPLGR_ 0 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 323.8343 3 320.49838 958.473312 105547.2 -0.24352 -7.8049E-05 0.31573 0.00010119 0.072202 2.3141E-05 320.498470124332 323.834485843549 81.358 1.9444 81.358 80.422 82.366 0 839 179 7 0 0 0 0.0047924 2 43274 61.999 45.797 1 0.99787 1.2622 0 275680000 139400000 136280000 786 995 384 431 1260;1261 1261 DHNIPQESPKPVK 13 2 0 Phospho (STY) _DHNIPQES(ph)PKPVK_ DHNIPQES(1)PKPVK DHNIPQES(99.66)PKPVK 0 0 1 1 Q15753 Q15753 Q15753 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 528.9303 3 523.587134 1567.73957 84348.41 0.58141 0.00030442 -0.30358 -0.00015895 0.27783 0.00014547 523.587048467848 528.929860795906 24.855 0.74937 24.855 24.428 25.177 0 85 38 5 0 0 0 1.5561E-07 1 11156 99.663 99.663 1 3.9223 3.2288 0 21885000 4049800 17835000 787 1075 385 432 1262 1262 2030 DHPLPEVAHVK 11 1 0 Unmodified _DHPLPEVAHVK_ 0 0 0 0 H3BPG0;P13073;Q86WV2;H3BN72;H3BNV9 H3BPG0 H3BPG0 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 417.2308 3 414.559417 1240.65642 93060.32 0.20595 8.5378E-05 -0.45453 -0.00018843 -0.24858 -0.00010305 414.559218989678 417.230717953665 106.66 1.8186 106.66 105.89 107.71 0 493 138 5 0 0 0 4.5035E-06 4 62203 96.171 88.751 1 1.2813 1.6069 0 58087000 26073000 32015000 788 868 386 433 1263;1264;1265;1266 1264 DHQYGLPIK 9 1 0 Unmodified _DHQYGLPIK_ 0 0 0 0 Q9BSC4;B4DS83;H7C1Z3 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 535.7856 2 535.785099 1069.55564 83933.6 1.1747 0.0006294 -0.38403 -0.00020576 0.7907 0.00042364 535.784843352811 539.791919406385 102.34 1.237 102.34 101.84 103.08 0 341 93 5 0 0 0 7.9647E-39 4 59319 171.73 129.74 1 1.0273 1.3032 0 37267000 17454000 19813000 789 1193 387 434 1267;1268;1269;1270 1270 DHQYQFLEDAVR 12 0 1 Unmodified _DHQYQFLEDAVR_ 0 0 0 0 B2R8R5;Q13263;M0R2I3;M0R3C0 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 766.3666 2 760.860054 1519.70556 71977.09 0.8318 0.00063289 0.3977 0.00030259 1.2295 0.00093548 761.362019795594 766.365141425186 119.73 0.88519 119.73 119.29 120.17 0 154 78 5 0 0 0 0.025188 1 72028 62.303 62.303 1 1.4017 1.6166 0 12174000 5700400 6473800 790 542 388 435 1271 1271 DHQYQFLEDAVR 12 0 1 Unmodified _DHQYQFLEDAVR_ 0 0 0 0 B2R8R5;Q13263;M0R2I3;M0R3C0 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 760.8607 2 760.860054 1519.70556 NaN NaN NaN 0.21854 0.00016628 NaN NaN NaN NaN 119.73 0.18522 119.73 119.62 119.81 0 0 0 0 0.0020017 1 71956 76.143 55.48 1 NaN NaN 0 2250900 2250900 0 791 542 388 435 1272 1272 DHQYQFLEDAVR 12 0 1 Unmodified _DHQYQFLEDAVR_ 0 0 0 0 B2R8R5;Q13263;M0R2I3;M0R3C0 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 760.8594 2 760.860054 1519.70556 NaN NaN NaN NaN NaN NaN NaN NaN NaN 120.43 1 120.43 119.93 120.93 -7.6294E-06 0 0 0 0.0010948 1 72517 83.862 55.463 1 792 542 388 435 1273 1273 DHQYQFLEDAVR 12 0 1 Unmodified _DHQYQFLEDAVR_ 0 0 0 0 B2R8R5;Q13263;M0R2I3;M0R3C0 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 765.8654 2 760.860054 1519.70556 NaN NaN NaN NaN NaN NaN NaN NaN NaN 120.52 1 120.52 120.02 121.02 7.6294E-06 0 0 0 0.0002355 1 72579 113.63 81.695 1 793 542 388 435 1274 1274 DHQYQFLEDAVR 12 0 1 Unmodified _DHQYQFLEDAVR_ 0 0 0 0 B2R8R5;Q13263;M0R2I3;M0R3C0 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 765.8674 2 760.860054 1519.70556 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.3 1 121.3 120.8 121.8 -7.6294E-06 0 0 0 7.721E-05 1 73211 71.451 53.011 1 794 542 388 435 1275 1275 DHTLVQTIAR 10 0 1 Unmodified _DHTLVQTIAR_ 0 0 0 0 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 577.3195 2 577.319837 1152.62512 81502.82 0.8685 0.0005014 0.58909 0.00034009 1.4576 0.00084149 577.320101705149 582.324191410955 95.406 0.54696 95.406 95.081 95.628 0 127 49 4 0 0 0 0.017299 2 53459 66.692 66.692 1 0.9387 1.1214 0 16612000 9348300 7264000 795 1060 389 436 1276;1277 1277 DHTVSGDEDYCPR 13 0 1 Phospho (STY) _DHTVS(ph)GDEDYCPR_ DHT(0.006)VS(0.994)GDEDYCPR DHT(-22.23)VS(22.23)GDEDY(-36.52)CPR 0 0 1 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 820.8011 2 815.795609 1629.57667 NaN NaN NaN 0.86022 0.00070176 NaN NaN NaN NaN 54.525 0.091209 54.525 54.47 54.561 0 0 0 0 0.0038781 1 23088 51.211 39.045 3 NaN NaN 0 3116500 0 3116500 796 1232 390 437 1278 1278 2511 DHTVSGDEDYCPR 13 0 1 Phospho (STY) _DHTVS(ph)GDEDYCPR_ DHT(0.059)VS(0.939)GDEDY(0.002)CPR DHT(-12.03)VS(12.03)GDEDY(-26)CPR 0 0 1 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 821.3024 2 815.795609 1629.57667 NaN NaN NaN -0.29229 -0.00023845 NaN NaN NaN NaN 54.888 0.96698 54.888 54.514 55.481 0 0 0 0 0.009577 1 23125 43.03 31.238 3 NaN NaN 0 16160000 0 16160000 797 1232 390 437 1279 1279 2511 DHTVSGDEDYCPR 13 0 1 Unmodified _DHTVSGDEDYCPR_ 0 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 781.3183 2 775.812444 1549.61033 NaN NaN NaN 0.38163 0.00029607 NaN NaN NaN NaN 65.244 0.26833 65.244 65.108 65.377 0 0 0 0 1.5661E-23 1 31296 117.52 95.322 1 NaN NaN 0 22839000 0 22839000 798 1232 390 438 1280 1280 DHTVSGDEDYCPR 13 0 1 Unmodified _DHTVSGDEDYCPR_ 0 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 520.8805 3 517.544055 1549.61033 NaN NaN NaN 0.13765 7.124E-05 NaN NaN NaN NaN 24.416 0.36838 24.416 24.222 24.591 0 0 0 0 0.0001097 1 10736 85.973 75.424 1 NaN NaN 0 7234600 0 7234600 799 1232 390 438 1281 1281 DHVVSDFSEHGSLK 14 1 0 Unmodified _DHVVSDFSEHGSLK_ 0 0 0 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 522.2541 3 519.582838 1555.72669 NaN NaN NaN NaN NaN NaN NaN NaN NaN 106.38 1 106.38 105.88 106.88 0 0 0 0 0.0015342 1 61899 52.265 42.214 1 800 1007 391 439 1282 1282 DIAAGEELLYDYGDR 15 0 1 Unmodified _DIAAGEELLYDYGDR_ 0 0 0 0 E3VVS3;A0A0C4DFR3;Q9NQR1 E3VVS3 E3VVS3 SETD8 N-lysine methyltransferase SETD8 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 855.4026 2 850.394124 1698.7737 NaN NaN NaN NaN NaN NaN NaN NaN NaN 114.29 1 114.29 113.79 114.79 7.6294E-06 0 0 0 2.8E-07 1 68043 72.958 53.715 1 801 314 392 440 1283 1283 DIAAGEELLYDYGDR 15 0 1 Unmodified _DIAAGEELLYDYGDR_ 0 0 0 0 E3VVS3;A0A0C4DFR3;Q9NQR1 E3VVS3 E3VVS3 SETD8 N-lysine methyltransferase SETD8 MULTI-SECPEP 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 856.0512 2 850.394124 1698.7737 71639.92 1.2069 0.0010263 0.28792 0.00024484 1.4948 0.0012711 850.895677449789 855.398448384892 118.81 0.52155 118.81 118.53 119.05 0 125 46 5 0 0 0 0.00070674 1 76534 75.088 62.511 1 2.2227 1.8384 0 5659400 1822000 3837300 802 314 392 440 1284 1284 DIDHETVVEEQIIGENSPPDYSEYMTGK 28 1 0 Oxidation (M),Phospho (STY) _DIDHETVVEEQIIGENS(ph)PPDYSEYM(ox)TGK_ DIDHETVVEEQIIGENSPPDYSEYM(1)TGK DIDHETVVEEQIIGENS(0.626)PPDY(0.269)S(0.094)EY(0.009)MT(0.001)GK DIDHETVVEEQIIGENSPPDYSEYM(54.17)TGK DIDHET(-43.87)VVEEQIIGENS(3.66)PPDY(-3.66)S(-8.23)EY(-18.24)MT(-26.75)GK 0 1 1 0 P25490;H0YJV7;H0YJU4 P25490 P25490 YY1 Transcriptional repressor protein YY1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1098.4717 3 1097.80228 3290.38501 57566.56 0.36337 0.00039891 -0.28938 -0.00031768 0.07399 8.1226E-05 1098.13630359031 1100.80790443431 110.03 1.0974 110.03 109.54 110.64 -7.6294E-06 810 88 12 0 0 0 4.5147E-13 2 65156 54.167 46.695 6 0.83521 1.0348 0 136940000 73623000 63315000 803 977 393 441 1285;1286 1286 274 1729 DIDIHEVR 8 0 1 Unmodified _DIDIHEVR_ 0 0 0 0 Q96BA7;B3KX72;Q00839;B4DLR3;Q5RI18;Q7Z4Q5 Q96BA7 Q96BA7 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 498.7588 2 498.759081 995.503609 85766.47 0.62376 0.00031111 -0.072444 -3.6132E-05 0.55132 0.00027497 498.758910759137 503.763090004884 80.182 1.6119 80.182 79.542 81.154 0 674 147 7 0 0 0 0.014507 2 42282 93.429 65.904 1 1.1539 1.4586 0 186940000 86250000 100690000 804 610 394 442 1287;1288 1287 DIDILNSAGK 10 1 0 Phospho (STY) _DIDILNS(ph)AGK_ DIDILNS(1)AGK DIDILNS(49.45)AGK 0 0 1 0 B7ZAX9;B4DZC0;O60264;Q4W5H1 B7ZAX9 B7ZAX9 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 563.2644 2 563.263011 1124.51147 NaN NaN NaN -2.5273 -0.0014235 NaN NaN NaN NaN 90.716 0.11785 90.716 90.635 90.753 0 0 0 0 0.015439 1 49986 49.448 8.9516 1 NaN NaN 0 3233600 3233600 0 805 672 395 443 1289 1289 1116 DIDILNSAGK 10 1 0 Unmodified _DIDILNSAGK_ 0 0 0 0 B7ZAX9;B4DZC0;O60264;Q4W5H1 B7ZAX9 B7ZAX9 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 527.2869 2 523.279846 1044.54514 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.769 1 85.769 85.269 86.269 0 0 0 0 0.0084712 1 55089 54.416 2.5621 1 806 672 395 444 1290 1290 DIDISSPEFK 10 1 0 Phospho (STY) _DIDISS(ph)PEFK_ DIDIS(0.113)S(0.887)PEFK DIDIS(-8.93)S(8.93)PEFK 0 0 1 0 Q09666;B4DTV0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 615.7687 2 615.768126 1229.5217 76919.52 0.96879 0.00059655 0.28137 0.00017326 1.2502 0.00076981 615.76823189111 619.775339244338 95.833 1.6181 95.833 95.081 96.699 -7.6294E-06 759 142 8 0 0 0 1.8851E-06 4 54166 116.77 76.721 2 1.1497 1.4235 0 184180000 82453000 101730000 807 1042 396 445 1291;1292;1293;1294 1293 1938;1939 DIDISSPEFK 10 1 0 Phospho (STY) _DIDIS(ph)SPEFK_ DIDIS(0.768)S(0.232)PEFK DIDIS(5.2)S(-5.2)PEFK 0 0 1 0 Q09666;B4DTV0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 619.7755 2 615.768126 1229.5217 78017.27 0.95791 0.00058985 0.031803 1.9583E-05 0.98971 0.00060943 615.768100343359 619.775171675244 101.49 1.4013 101.49 100.83 102.23 0 754 130 8 0 0 0 0.00097872 2 65401 81.017 72.287 2 0.83689 0.55474 0 73791000 42398000 31392000 808 1042 396 445 1295;1296 1295 1938;1939 DIDNNLITSTPR 12 0 1 Phospho (STY) _DIDNNLITST(ph)PR_ DIDNNLIT(0.049)S(0.326)T(0.625)PR DIDNNLIT(-11.07)S(-2.83)T(2.83)PR 0 0 1 0 A0A024R5Q8;Q05D32;H0YMH7;H0YNU2;H0YNW9 A0A024R5Q8 A0A024R5Q8 CTDSPL2 CTD small phosphatase-like protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 724.8369 2 719.832321 1437.65009 71359.98 0.45101 0.00032465 0.27739 0.00019967 0.7284 0.00052433 719.832877290965 724.836671516218 83.893 0.8354 83.893 83.502 84.337 0 227 79 5 0 0 0 5.0815E-19 2 45275 135.14 118.13 3 1.5515 1.9084 0 25508000 9764900 15743000 809 111 397 446 1297;1298 1298 154;2639;2640 DIDNNLITSTPR 12 0 1 Phospho (STY) _DIDNNLIT(ph)STPR_ DIDNNLIT(0.333)S(0.333)T(0.333)PR DIDNNLIT(0)S(0)T(0)PR 0 0 1 0 A0A024R5Q8;Q05D32;H0YMH7;H0YNU2;H0YNW9 A0A024R5Q8 A0A024R5Q8 CTDSPL2 CTD small phosphatase-like protein 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 724.8373 2 719.832321 1437.65009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.406 1 83.406 82.906 83.906 0 0 0 0 0.0060067 1 44758 53.754 37.616 3 810 111 397 446 1299 1299 154;2639;2640 DIDNNLITSTPR 12 0 1 Phospho (STY) _DIDNNLIT(ph)STPR_ DIDNNLIT(0.375)S(0.25)T(0.375)PR DIDNNLIT(0)S(-1.75)T(0)PR 0 0 1 0 A0A024R5Q8;Q05D32;H0YMH7;H0YNU2;H0YNW9 A0A024R5Q8 A0A024R5Q8 CTDSPL2 CTD small phosphatase-like protein 2 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 724.8371 2 719.832321 1437.65009 NaN NaN NaN -0.24978 -0.0001798 NaN NaN NaN NaN 90.665 0.75274 90.665 90.34 91.093 0 0 0 0 0.0042983 1 58418 58.32 36.872 3 NaN NaN 0 3897500 0 3897500 811 111 397 446 1300 1300 154;2639;2640 DIDNNLITSTPR 12 0 1 2 Phospho (STY) _DIDNNLITS(ph)T(ph)PR_ DIDNNLIT(0.489)S(0.842)T(0.669)PR DIDNNLIT(-1.88)S(5.09)T(1.88)PR 0 0 2 0 A0A024R5Q8;Q05D32;H0YMH7;H0YNU2;H0YNW9 A0A024R5Q8 A0A024R5Q8 CTDSPL2 CTD small phosphatase-like protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 760.3184 2 759.815486 1517.61642 70577.21 0.82576 0.00062742 0.1251 9.5055E-05 0.95086 0.00072248 759.815570906393 765.321414723108 86.837 0.8513 86.837 86.407 87.259 7.6294E-06 251 80 5 0 0 0 0.0015799 2 46954 72.321 56.097 3 0.86867 1.079 0 35999000 17300000 18699000 812 111 397 447 1301;1302 1302 154;2639;2640 DIEISTEEEK 10 1 0 Phospho (STY) _DIEIS(ph)TEEEK_ DIEIS(0.5)T(0.5)EEEK DIEIS(0)T(0)EEEK 0 0 1 0 Q4G0J3 Q4G0J3 Q4G0J3 LARP7 La-related protein 7 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 640.7748 2 636.765781 1271.51701 78423.59 1.2915 0.00082235 -0.41066 -0.00026149 0.8808 0.00056086 636.765601708048 640.772717101592 57.865 0.79564 57.865 57.499 58.295 0 269 72 5 0 0 0 0.01497 2 35490 47.288 22.433 2 0.55753 0.42667 0 11867000 7462000 4404600 813 1085 398 448 1303;1304 1304 2043;2935 DIENQYETQITQIEHEVSSSGQEVQSSAK 29 1 0 Unmodified _DIENQYETQITQIEHEVSSSGQEVQSSAK_ 0 0 0 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1089.1781 3 1088.84281 3263.50659 NaN NaN NaN -0.14446 -0.00015729 NaN NaN NaN NaN 123.74 2.424 123.74 122.49 124.92 0 0 0 0 2.0979E-88 2 75172 135.35 109.34 1 NaN NaN 0 44325000 44325000 0 + 814 757 399 449 1305;1306 1306 DIENQYETQITQIEHEVSSSGQEVQSSAK 29 1 0 Unmodified _DIENQYETQITQIEHEVSSSGQEVQSSAK_ 0 0 0 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1089.1771 3 1088.84281 3263.50659 NaN NaN NaN -0.019786 -2.1543E-05 NaN NaN NaN NaN 125.56 0.88595 125.56 125.24 126.13 0 0 0 0 5.0844E-05 1 81025 41.209 28.422 1 NaN NaN 0 316760000 316760000 0 + 815 757 399 449 1307 1307 DIFPYSENK 9 1 0 Phospho (STY) _DIFPYS(ph)ENK_ DIFPYS(1)ENK DIFPY(-55.36)S(55.36)ENK 0 0 1 0 Q05CM9;O75475 Q05CM9 Q05CM9 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 600.7574 2 596.749737 1191.48492 81069.24 0.98226 0.00058617 -0.082026 -4.8949E-05 0.90024 0.00053722 596.749659720252 600.756754027191 90.007 0.92094 90.007 89.376 90.297 0 286 79 5 0 0 0 0.0002005 2 49626 87.298 61.255 2 0.53728 0.66513 0 24005000 14100000 9905400 816 936 400 450 1308;1309 1309 1603 DIFPYSENK 9 1 0 Phospho (STY) _DIFPYS(ph)ENK_ DIFPY(0.003)S(0.997)ENK DIFPY(-24.82)S(24.82)ENK 0 0 1 0 Q05CM9;O75475 Q05CM9 Q05CM9 PSIP1 PC4 and SFRS1-interacting protein MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 596.7507 2 596.749737 1191.48492 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.312 1 89.312 88.812 89.812 0 0 0 0 0.011362 1 48912 47.559 25.428 2 817 936 400 450 1310 1310 1603 DIFPYSENK 9 1 0 Phospho (STY) _DIFPYS(ph)ENK_ DIFPYS(1)ENK DIFPY(-43.91)S(43.91)ENK 0 0 1 0 Q05CM9;O75475 Q05CM9 Q05CM9 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 596.7503 2 596.749737 1191.48492 78320.27 0.80274 0.00047904 0.24084 0.00014372 1.0436 0.00062276 596.749803184319 600.756891414953 93.278 1.1241 93.278 92.737 93.861 0 622 110 8 0 0 0 0.0012408 3 60291 73.327 52.549 2 1.2916 0.84902 0 55764000 23223000 32540000 818 936 400 450 1311;1312;1313 1313 1603 DIFYYEDDSEGEDIEK 16 1 0 Phospho (STY) _DIFYYEDDS(ph)EGEDIEK_ DIFYYEDDS(1)EGEDIEK DIFY(-126.07)Y(-112.15)EDDS(112.15)EGEDIEK 0 0 1 0 B4DZG2;A0A024R8C1;Q15361;A0A087WY09 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1024.3923 2 1023.89062 2045.76669 60947.39 0.38339 0.00039255 0.2198 0.00022505 0.60319 0.0006176 1023.8909201491 1027.8979679901 106.7 1.2995 106.7 106.01 107.31 0 750 99 10 0 0 0 1.3474E-86 2 61904 183.23 173.8 3 0.90909 1.125 0 236760000 114330000 122440000 819 150 401 451 1314;1315 1315 226 DIFYYEDDSEGEDIEK 16 1 0 Phospho (STY) _DIFYYEDDS(ph)EGEDIEK_ DIFYYEDDS(1)EGEDIEK DIFY(-114.37)Y(-101.77)EDDS(101.77)EGEDIEK 0 0 1 0 B4DZG2;A0A024R8C1;Q15361;A0A087WY09 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1028.4009 2 1023.89062 2045.76669 60319.18 0.56714 0.00058069 0.61211 0.00062673 1.1792 0.0012074 1024.39297065075 1028.39970097119 114.19 2.748 114.19 113.53 116.28 0 1346 250 13 0 0 0 7.8492E-73 2 73275 169.02 156.52 3 1.8983 1.2664 0 505790000 177930000 327860000 820 150 401 451 1316;1317 1317 226 DIGSESTEDQAMEDIK 16 1 0 Oxidation (M),2 Phospho (STY) _DIGS(ph)ES(ph)TEDQAM(ox)EDIK_ DIGSESTEDQAM(1)EDIK DIGS(0.974)ES(0.9)T(0.126)EDQAMEDIK DIGSESTEDQAM(79.02)EDIK DIGS(15.29)ES(9.43)T(-9.43)EDQAMEDIK 0 1 2 0 CON__P02662 CON__P02662 CON__P02662 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 973.8488 2 972.346884 1942.67921 NaN NaN NaN -0.25838 -0.00025123 NaN NaN NaN NaN 67.619 1.2375 67.619 66.964 68.201 0 0 0 0 5.4817E-08 3 33398 79.022 54.167 3 NaN NaN 0 149580000 149580000 0 + 821 751 402 452 1318;1319;1320 1319 199 1261;1262 DIGSESTEDQAMEDIK 16 1 0 Oxidation (M),Phospho (STY) _DIGS(ph)ESTEDQAM(ox)EDIK_ DIGSESTEDQAM(1)EDIK DIGS(0.542)ES(0.068)T(0.389)EDQAMEDIK DIGSESTEDQAM(48.42)EDIK DIGS(1.44)ES(-9)T(-1.44)EDQAMEDIK 0 1 1 0 CON__P02662 CON__P02662 CON__P02662 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 932.3651 2 932.363718 1862.71288 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.62 1 63.62 63.12 64.12 -3.8147E-06 0 0 0 0.0008406 1 30016 48.423 39.469 3 + 822 751 402 453 1321 1321 199 1261;1262 DIHEELPK 8 1 0 Unmodified _DIHEELPK_ 0 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 494.7635 2 490.756007 979.497461 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.231 1 77.231 76.731 77.731 -7.6294E-06 0 0 0 0.021417 1 40217 63.419 45.383 1 823 69 403 454 1322 1322 DIHEELPK 8 1 0 Unmodified _DIHEELPK_ 0 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 490.7566 2 490.756007 979.497461 87571.22 0.4819 0.0002365 0.0047417 2.327E-06 0.48664 0.00023882 490.756004106142 494.763044842305 36.118 0.55412 36.118 35.827 36.381 0 138 43 4 0 0 0 0.026777 1 20339 67.993 54.217 1 1.1345 0.95732 0 4751800 2589400 2162400 824 69 403 454 1323 1323 DIIDTPMDFATVR 13 0 1 Oxidation (M),Phospho (STY) _DIIDT(ph)PM(ox)DFATVR_ DIIDTPM(1)DFATVR DIIDT(0.999)PMDFAT(0.001)VR DIIDTPM(74.68)DFATVR DIIDT(32.47)PMDFAT(-32.47)VR 0 1 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 795.8528 2 795.349489 1588.68442 NaN NaN NaN -0.6673 -0.00053074 NaN NaN NaN NaN 110.42 0.81931 110.42 110.16 110.98 0 0 0 0 0.0010691 1 65116 74.678 38.735 2 NaN NaN 0 12190000 12190000 0 825 1167 404 455 1324 1324 324 2965 DIIHDPGR 8 0 1 Unmodified _DIIHDPGR_ 0 0 0 0 E9PKZ0;P62917;G3V1A1;B4DVG7;E9PKU4 E9PKZ0 E9PKZ0 RPL8 60S ribosomal protein L8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 461.7406 2 461.740691 921.466829 88223.98 0.12617 5.8258E-05 -0.24534 -0.00011328 -0.11917 -5.5026E-05 461.740662683611 466.744772680087 72.721 2.4751 72.721 71.518 73.993 0 775 213 8 0 0 0 0.011777 2 36619 95.531 56.739 1 0.8375 1.0606 0 537260000 298060000 239200000 826 811 405 456 1325;1326 1326 DIIHDPGR 8 0 1 Unmodified _DIIHDPGR_ 0 0 0 0 E9PKZ0;P62917;G3V1A1;B4DVG7;E9PKU4 E9PKZ0 E9PKZ0 RPL8 60S ribosomal protein L8 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 466.7449 2 461.740691 921.466829 88442.79 0.342 0.00015792 0.0097512 4.5025E-06 0.35175 0.00016242 461.740632033979 466.744710815952 27.362 0.5779 27.362 27.098 27.676 -1.9073E-06 160 36 8 0 0 0 0.031324 1 13235 65.252 33.963 1 0.8755 0.59191 0 74911000 40522000 34388000 827 811 405 456 1327 1327 DIIIFVGTPVQK 12 1 0 Phospho (STY) _DIIIFVGT(ph)PVQK_ DIIIFVGT(1)PVQK DIIIFVGT(91.91)PVQK 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 705.8784 2 705.375636 1408.73672 72341.52 1.092 0.00077024 -0.077622 -5.4752E-05 1.0143 0.00071549 705.37560069724 709.38235908969 124.73 0.8097 124.73 124.24 125.05 0 389 73 8 0 0 0 7.238E-05 3 75427 91.914 91.914 1 1.0443 1.3169 0 30200000 15566000 14634000 828 994 406 457 1328;1329;1330 1329 2888 DIIIFVGTPVQK 12 1 0 Phospho (STY) _DIIIFVGT(ph)PVQK_ DIIIFVGT(1)PVQK DIIIFVGT(71.24)PVQK 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 709.3826 2 705.375636 1408.73672 NaN NaN NaN NaN NaN NaN NaN NaN NaN 125.1 1 125.1 124.6 125.6 7.6294E-06 0 0 0 0.00023086 1 75824 71.241 47.211 1 829 994 406 457 1331 1331 2888 DIIIFVGTPVQK 12 1 0 Phospho (STY) _DIIIFVGT(ph)PVQK_ DIIIFVGT(1)PVQK DIIIFVGT(88.55)PVQK 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 709.3839 2 705.375636 1408.73672 72312 1.0246 0.00072271 0.18444 0.0001301 1.209 0.00085281 705.375619105618 709.382829752099 133.67 0.84424 133.67 133.27 134.12 0 396 80 7 0 0 0 0.0013548 1 86077 88.552 70.241 1 2.3954 1.6328 0 25287000 7764000 17523000 830 994 406 457 1332 1332 2888 DIIIFVGTPVQK 12 1 0 Unmodified _DIIIFVGTPVQK_ 0 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 669.4008 2 665.39247 1328.77039 NaN NaN NaN 0.24342 0.00016197 NaN NaN NaN NaN 126.33 0.39037 126.33 126.15 126.54 0 0 0 0 1.2475E-09 1 81550 96.89 85.739 1 NaN NaN 0 1779500 0 1779500 831 994 406 458 1333 1333 DIISIAEDEDLR 12 0 1 Unmodified _DIISIAEDEDLR_ 0 0 0 0 B4DE32;B1AHC9;B2RDN9;A0A024R1N4;P12956;B4E356 B4DE32 B4DE32 XRCC6 X-ray repair cross-complementing protein 6 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 694.8486 2 694.848821 1387.68309 NaN NaN NaN -0.21711 -0.00015086 NaN NaN NaN NaN 112.31 0.57992 112.31 112 112.58 7.6294E-06 0 0 0 9.3788E-10 1 66561 98.943 30.208 1 NaN NaN 0 12348000 12348000 0 832 50 407 459 1334 1334 DIISIAEDEDLR 12 0 1 Unmodified _DIISIAEDEDLR_ 0 0 0 0 B4DE32;B1AHC9;B2RDN9;A0A024R1N4;P12956;B4E356 B4DE32 B4DE32 XRCC6 X-ray repair cross-complementing protein 6 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 695.3505 2 694.848821 1387.68309 NaN NaN NaN -0.208 -0.00014453 NaN NaN NaN NaN 116.81 0.54545 116.81 116.42 116.97 0 0 0 0 0.0023216 1 75184 74.841 29.704 1 NaN NaN 0 2891100 2891100 0 833 50 407 459 1335 1335 DIKEESDEEEEDDEESGR 18 1 1 Phospho (STY) _DIKEES(ph)DEEEEDDEESGR_ DIKEES(0.999)DEEEEDDEES(0.001)GR DIKEES(30.2)DEEEEDDEES(-30.2)GR 0 0 1 1 Q96EV2;H7BXM6;A8MTF7;H7C0H2 Q96EV2 Q96EV2 RBM33 RNA-binding protein 33 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1119.4137 2 1110.40281 2218.79107 NaN NaN NaN 0.73833 0.00081984 NaN NaN NaN NaN 23.106 0.4237 23.106 22.973 23.397 0 0 0 0 0.00011443 1 9633 51.876 38.197 2 NaN NaN 0 19925000 0 19925000 834 1174 408 460 1336 1336 2306 DILETHLR 8 0 1 Unmodified _DILETHLR_ 0 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 498.7769 2 498.777274 995.539994 NaN NaN NaN -0.38686 -0.00019295 NaN NaN NaN NaN 98.8 0.73536 98.8 98.294 99.03 0 0 0 0 3.2993E-06 3 56138 91.626 34.345 1 NaN NaN 0 7923600 7923600 0 835 1027 409 461 1337;1338;1339 1339 DILIQYDR 8 0 1 Unmodified _DILIQYDR_ 0 0 0 0 M0R210;P62249;A0A087WZ27 M0R210 M0R210 RPS16;ZNF90 40S ribosomal protein S16 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 523.2808 2 518.277106 1034.53966 NaN NaN NaN 0.34281 0.00017767 NaN NaN NaN NaN 92.778 0.17839 92.778 92.715 92.893 0 0 0 0 0.02307 1 51512 51.854 19.014 1 NaN NaN 0 9496100 0 9496100 836 914 410 462 1340 1340 DILIQYDR 8 0 1 Unmodified _DILIQYDR_ 0 0 0 0 M0R210;P62249;A0A087WZ27 M0R210 M0R210 RPS16;ZNF90 40S ribosomal protein S16 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 523.2814 2 518.277106 1034.53966 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.414 1 92.414 91.914 92.914 -7.6294E-06 0 0 0 0.019633 1 51261 69.423 26.177 1 837 914 410 462 1341 1341 DINSVAIAPNDK 12 1 0 Unmodified _DINSVAIAPNDK_ 0 0 0 0 A0JLS5;J3KNP2;Q12788;A0A087WYP7 A0JLS5 A0JLS5 TBL3 Transducin beta-like protein 3 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 632.8349 2 628.827692 1255.64083 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.104 1 65.104 64.604 65.604 -7.6294E-06 0 0 0 0.0015884 1 40625 56.404 43.368 1 838 397 411 463 1342 1342 DINTFLGTPVQK 12 1 0 Phospho (STY) _DINTFLGT(ph)PVQK_ DINTFLGT(1)PVQK DINT(-48.06)FLGT(48.06)PVQK 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 707.3111 2 706.8447 1411.67485 74070.84 1.0869 0.00076827 -0.40433 -0.0002858 0.68257 0.00048247 706.844167335976 710.85169856726 104.74 1.1427 104.74 104.24 105.38 0 310 80 5 0 0 0 1.8616E-05 1 60778 80.815 52.719 2 0.9714 1.1914 0 21079000 11529000 9550000 839 994 412 464 1343 1343 2889 DINTFVGTPVEK 12 1 0 Phospho (STY) _DINTFVGT(ph)PVEK_ DINTFVGT(1)PVEK DINT(-62.83)FVGT(62.83)PVEK 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 700.3293 2 700.328882 1398.64321 73303.27 1.3821 0.00096789 -0.26344 -0.00018449 1.1186 0.0007834 700.328482251055 704.335843880335 92.901 1.0887 92.901 92.279 93.368 0 266 93 5 0 0 0 1.0479E-32 2 51425 156.6 129.48 2 0.8294 1.0511 0 42318000 23075000 19243000 840 994 413 465 1344;1345 1345 2890 DINTFVGTPVEK 12 1 0 Phospho (STY) _DINTFVGT(ph)PVEK_ DINTFVGT(1)PVEK DINT(-46.12)FVGT(46.12)PVEK 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 700.3312 2 700.328882 1398.64321 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.412 1 93.412 92.912 93.912 0 0 0 0 0.0027454 1 52057 83.729 34.988 2 841 994 413 465 1346 1346 2890 DINTFVGTPVEK 12 1 0 Phospho (STY) _DINTFVGT(ph)PVEK_ DINTFVGT(1)PVEK DINT(-55.88)FVGT(55.88)PVEK 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 704.838 2 700.328882 1398.64321 72719.13 1.0317 0.0007225 0.044951 3.1481E-05 1.0766 0.00075398 700.328934265292 704.335994768563 97.652 1.3622 97.652 97.026 98.388 0 635 126 7 0 0 0 4.5307E-13 2 63101 115.78 88.038 2 1.7026 1.1109 0 32421000 11261000 21160000 842 994 413 465 1347;1348 1348 2890 DINTFVGTPVEK 12 1 0 Unmodified _DINTFVGTPVEK_ 0 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 664.3539 2 660.345717 1318.67688 NaN NaN NaN -0.20853 -0.0001377 NaN NaN NaN NaN 94.753 0.56463 94.753 94.571 95.136 0 0 0 0 0.0032712 1 53043 70.977 22.181 1 NaN NaN 0 11647000 0 11647000 843 994 413 466 1349 1349 DIPGLTDTTVPR 12 0 1 Unmodified _DIPGLTDTTVPR_ 0 0 0 0 Q96DV6;A2A3R6;P62753;A2A3R5;Q9BZU1 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 642.8452 2 642.843342 1283.67213 75722.95 1.87 0.0012021 -0.011049 -7.1027E-06 1.8589 0.001195 642.843352005944 647.847354985196 100.43 1.404 100.43 99.838 101.24 0 511 107 7 0 0 0 4.9421E-09 2 57352 105.98 105.98 1 0.76172 0.9621 0 121630000 68452000 53181000 844 405 414 467 1350;1351 1350 DIPGLTDTTVPR 12 0 1 Unmodified _DIPGLTDTTVPR_ 0 0 0 0 Q96DV6;A2A3R6;P62753;A2A3R5;Q9BZU1 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 647.8487 2 642.843342 1283.67213 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.913 1 99.913 99.413 100.41 0 0 0 0 0.00034297 1 57077 64.297 37.783 1 845 405 414 467 1352 1352 DIPGLTDTTVPR 12 0 1 Unmodified _DIPGLTDTTVPR_ 0 0 0 0 Q96DV6;A2A3R6;P62753;A2A3R5;Q9BZU1 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 647.8489 2 642.843342 1283.67213 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.926 1 99.926 99.426 100.43 7.6294E-06 0 0 0 0.00089118 1 57088 60.434 40.672 1 846 405 414 467 1353 1353 DIPGLTDTTVPR 12 0 1 Unmodified _DIPGLTDTTVPR_ 0 0 0 0 Q96DV6;A2A3R6;P62753;A2A3R5;Q9BZU1 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 647.8478 2 642.843342 1283.67213 76015.71 1.2035 0.00077369 -0.18237 -0.00011724 1.0212 0.00065645 642.843197589341 647.847301589311 100.77 1.3753 100.77 100.27 101.64 -7.6294E-06 686 128 8 0 0 0 0.02483 2 64873 58.37 58.37 1 1.4323 0.96794 0 76530000 31011000 45519000 847 405 414 467 1354;1355 1354 DIQSCTVEVHFQK 13 1 0 Unmodified _DIQSCTVEVHFQK_ 0 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JWF0;C9IYK2;C9JJ64;C9JVD8;C9J578;C9J9E4 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 799.8898 2 795.882672 1589.75079 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.529 1 89.529 89.029 90.029 0 0 0 0 0.00012133 1 49084 65.5 40.646 1 848 1220 415 468 1356 1356 DISEASVFDAYVLPK 15 1 0 Unmodified _DISEASVFDAYVLPK_ 0 0 0 0 A0A024RB14;P62854;Q75MH1 A0A024RB14 A0A024RB14 RPS26 40S ribosomal protein S26 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 831.4295 2 827.422153 1652.82975 67303.07 1.0451 0.00086471 0.15755 0.00013036 1.2026 0.00099507 827.422160794022 831.429029099091 127.63 1.2311 127.63 127.06 128.29 7.6294E-06 558 112 7 0 0 0 3.4898E-18 3 77671 118.48 101.85 1 0.92315 1.1702 0 34105000 16175000 17929000 849 189 416 469 1357;1358;1359 1359 DISEASVFDAYVLPK 15 1 0 Unmodified _DISEASVFDAYVLPK_ 0 0 0 0 A0A024RB14;P62854;Q75MH1 A0A024RB14 A0A024RB14 RPS26 40S ribosomal protein S26 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 831.4307 2 827.422153 1652.82975 66668.38 1.0102 0.00083585 0.44053 0.0003645 1.4507 0.0012004 827.422292737225 831.429575179529 133.92 0.73886 133.92 133.6 134.34 0 322 68 9 0 0 0 0.0029286 2 86295 64.55 50.207 1 1.3747 0.90965 0 67620000 28159000 39461000 850 189 416 469 1360;1361 1360 DISSSLNSLADSNAR 15 0 1 Phospho (STY) _DISSS(ph)LNSLADSNAR_ DIS(0.019)S(0.089)S(0.891)LNS(0.002)LADSNAR DIS(-16.72)S(-10.02)S(10.02)LNS(-27.57)LADS(-47.75)NAR 0 0 1 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 820.3652 2 815.359431 1628.70431 67942.76 0.73985 0.00060324 0.54153 0.00044154 1.2814 0.0010448 815.359689345139 820.365398663551 87.989 0.24773 87.989 87.906 88.154 0 40 20 4 0 0 0 3.0179E-06 1 47966 83.856 67.083 5 0.66469 0.79127 0 15827000 11540000 4287000 851 101 417 470 1362 1362 132;133;134 DISSSLNSLADSNAR 15 0 1 Phospho (STY) _DIS(ph)SSLNSLADSNAR_ DIS(0.333)S(0.333)S(0.333)LNS(0.002)LADSNAR DIS(0)S(0)S(0)LNS(-22.14)LADS(-40.78)NAR 0 0 1 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 815.3847 2 815.359431 1628.70431 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.698 1 87.698 87.198 88.198 0 0 0 0 0.00037515 1 47740 52.693 37.121 5 852 101 417 470 1363 1363 132;133;134 DISSSLNSLADSNAR 15 0 1 Phospho (STY) _DIS(ph)SSLNSLADSNAR_ DIS(0.469)S(0.469)S(0.062)LNSLADSNAR DIS(0)S(0)S(-8.78)LNS(-31.98)LADS(-50.16)NAR 0 0 1 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 820.3638 2 815.359431 1628.70431 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.49 1 103.49 102.99 103.99 7.6294E-06 0 0 0 0.00016485 1 59792 54.7 43.167 5 853 101 417 470 1364 1364 132;133;134 DISSSLNSLADSNAR 15 0 1 Phospho (STY) _DIS(ph)SSLNSLADSNAR_ DIS(0.455)S(0.455)S(0.09)LNSLADSNAR DIS(0)S(0)S(-7.02)LNS(-37.78)LADS(-56.08)NAR 0 0 1 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 815.3599 2 815.359431 1628.70431 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.87 1 103.87 103.37 104.37 0 0 0 0 6.1769E-05 1 60048 60.255 48.279 5 854 101 417 470 1365 1365 132;133;134 DISSSLNSLADSNAR 15 0 1 Phospho (STY) _DISSS(ph)LNSLADSNAR_ DIS(0.017)S(0.17)S(0.812)LNS(0.001)LADSNAR DIS(-16.74)S(-6.8)S(6.8)LNS(-28.1)LADS(-51.82)NAR 0 0 1 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 820.363 2 815.359431 1628.70431 NaN NaN NaN -2.0764 -0.001693 NaN NaN NaN NaN 93.994 0.26002 93.994 93.849 94.109 0 0 0 0 3.5266E-05 1 60568 80.632 52.968 5 NaN NaN 0 6325000 0 6325000 855 101 417 470 1366 1366 132;133;134 DISSSLNSLADSNAR 15 0 1 Unmodified _DISSSLNSLADSNAR_ 0 0 0 0 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 780.3821 2 775.376266 1548.73798 NaN NaN NaN -0.45408 -0.00035209 NaN NaN NaN NaN 96.336 0.42198 96.336 96.127 96.549 0 0 0 0 0.031451 1 61937 34.05 21.473 1 NaN NaN 0 2418400 0 2418400 856 101 417 471 1367 1367 DISTILDEERK 11 1 1 Unmodified _DISTILDEERK_ 0 0 0 1 Q96T23;H0YDG9 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 659.8477 2 659.846081 1317.67761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.39 1 100.39 99.894 100.89 0 0 0 0 0.0069203 1 57475 65.347 37.605 1 857 1188 418 472 1368 1368 DISTILDEERK 11 1 1 Unmodified _DISTILDEERK_ 0 0 0 1 Q96T23;H0YDG9 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 659.8477 2 659.846081 1317.67761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.42 1 100.42 99.922 100.92 0 0 0 0 0.016232 1 57499 55.567 27.825 1 858 1188 418 472 1369 1369 DITNVSLYPVVK 12 1 0 Phospho (STY) _DITNVSLY(ph)PVVK_ DITNVS(0.014)LY(0.986)PVVK DIT(-105.16)NVS(-18.43)LY(18.43)PVVK 0 0 1 0 B5BUA4;Q5FBB7;A0A024R2J4 B5BUA4 B5BUA4 SGOL1 Shugoshin-like 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 718.3698 2 714.362725 1426.7109 72954.67 0.73067 0.00052197 -0.17626 -0.00012591 0.55441 0.00039605 714.362580049092 718.369445295302 115.48 0.70421 115.48 115.17 115.87 7.6294E-06 268 60 6 0 0 0 1.7972E-25 2 68824 140.16 81.184 3 1.0354 1.314 0 39144000 20313000 18831000 859 691 419 473 1370;1371 1371 3018 DITNVSLYPVVK 12 1 0 Phospho (STY) _DITNVSLY(ph)PVVK_ DITNVS(0.037)LY(0.963)PVVK DIT(-43.52)NVS(-14.16)LY(14.16)PVVK 0 0 1 0 B5BUA4;Q5FBB7;A0A024R2J4 B5BUA4 B5BUA4 SGOL1 Shugoshin-like 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 714.8643 2 714.362725 1426.7109 72255.83 1.0754 0.00076821 0.011974 8.5535E-06 1.0873 0.00077676 714.362584634473 718.369843975354 123.67 0.94691 123.67 123.2 124.15 0 501 91 7 0 0 0 0.0019857 2 79802 68.355 44.677 3 2.1887 1.4302 0 46991000 15032000 31959000 860 691 419 473 1372;1373 1373 3018 DIVEELSALK 10 1 0 Phospho (STY) _DIVEELS(ph)ALK_ DIVEELS(1)ALK DIVEELS(77.06)ALK 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 602.8024 2 598.794144 1195.57374 NaN NaN NaN -0.09184 -5.4994E-05 NaN NaN NaN NaN 127.03 0.44633 127.03 126.76 127.21 -7.6294E-06 0 0 0 0.00027188 1 81978 77.062 51.124 1 NaN NaN 0 4829400 0 4829400 861 994 420 474 1374 1374 1774 DIVEELSALK 10 1 0 Phospho (STY) _DIVEELS(ph)ALK_ DIVEELS(1)ALK DIVEELS(43.9)ALK 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 598.7954 2 598.794144 1195.57374 NaN NaN NaN NaN NaN NaN NaN NaN NaN 126.95 1 126.95 126.45 127.45 0 0 0 0 0.013173 1 81988 43.897 6.5525 1 862 994 420 474 1375 1375 1774 DIYLSPDR 8 0 1 Phospho (STY) _DIYLS(ph)PDR_ DIYLS(1)PDR DIY(-44.54)LS(44.54)PDR 0 0 1 0 Q86VN0;Q15696 Q86VN0 Q86VN0 ZRSR2 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 529.7311 2 529.731347 1057.44814 NaN NaN NaN -0.33072 -0.00017519 NaN NaN NaN NaN 75.358 0.51993 75.358 75.105 75.625 0 0 0 0 0.0012605 1 38878 77.379 51.942 2 NaN NaN 0 12349000 12349000 0 863 1071 421 475 1376 1376 2025 DIYLSPDR 8 0 1 Phospho (STY) _DIYLS(ph)PDR_ DIY(0.004)LS(0.996)PDR DIY(-23.56)LS(23.56)PDR 0 0 1 0 Q86VN0;Q15696 Q86VN0 Q86VN0 ZRSR2 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 529.7311 2 529.731347 1057.44814 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.678 1 74.678 74.178 75.178 0 0 0 0 0.011279 1 38287 58.37 34.34 2 864 1071 421 475 1377 1377 2025 DIYLSPDR 8 0 1 Phospho (STY) _DIYLS(ph)PDR_ DIY(0.022)LS(0.978)PDR DIY(-16.46)LS(16.46)PDR 0 0 1 0 Q86VN0;Q15696 Q86VN0 Q86VN0 ZRSR2 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 534.7354 2 529.731347 1057.44814 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.785 1 74.785 74.285 75.285 0 0 0 0 0.012239 1 38363 51.268 30.397 2 865 1071 421 475 1378 1378 2025 DIYLSPDR 8 0 1 Phospho (STY) _DIYLS(ph)PDR_ DIY(0.014)LS(0.986)PDR DIY(-18.37)LS(18.37)PDR 0 0 1 0 Q86VN0;Q15696 Q86VN0 Q86VN0 ZRSR2 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 529.7331 2 529.731347 1057.44814 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.789 1 74.789 74.289 75.289 0 0 0 0 0.019299 1 38367 43.297 22.427 2 866 1071 421 475 1379 1379 2025 DKDDDEVFEK 10 2 0 Unmodified _DKDDDEVFEK_ 0 0 0 1 C9J6B6;C9JF13;E7EX73;B4DSI9;E9PGM1;E7EUU4;B4DGF1;B2RU10;B2RU06;Q4LE58;Q04637 C9J6B6 C9J6B6 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 628.2869 2 620.272415 1238.53028 75971.55 0.50763 0.00031487 -0.12834 -7.9603E-05 0.3793 0.00023527 620.272334835326 628.286326362736 73.63 1.1007 73.63 73.441 74.541 0 298 95 6 0 0 0 1.2359E-05 2 37663 109.16 90.062 1 1.8333 2.2988 0 47249000 17438000 29811000 867 563 422 476 1380;1381 1380 DKIELDSSSPASK 13 2 0 Phospho (STY) _DKIELDS(ph)SSPASK_ DKIELDS(0.326)S(0.326)S(0.326)PAS(0.021)K DKIELDS(0)S(0)S(0)PAS(-11.97)K 0 0 1 1 H0YKY0;Q86TU0;A0A024R6M9;H0YN33;Q9BW66 H0YKY0 H0YKY0 CINP Cyclin-dependent kinase 2-interacting protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 736.8475 2 728.831986 1455.64942 75778.02 0.92588 0.00067481 -0.45182 -0.0003293 0.47406 0.00034551 729.332833239256 736.845966221775 63.891 0.19772 63.891 63.774 63.972 0 36 13 4 0 0 0 3.7172E-10 2 30204 105.99 96.458 4 0.79478 0.85649 0 11146000 6648800 4496800 868 123 423 477 1382;1383 1383 180;181;182 DKIELDSSSPASK 13 2 0 Phospho (STY) _DKIELDS(ph)SSPASK_ DKIELDS(0.333)S(0.333)S(0.333)PAS(0.002)K DKIELDS(0)S(0)S(0)PAS(-22)K 0 0 1 1 H0YKY0;Q86TU0;A0A024R6M9;H0YN33;Q9BW66 H0YKY0 H0YKY0 CINP Cyclin-dependent kinase 2-interacting protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 736.8453 2 728.831986 1455.64942 74239.73 0.93125 0.00067872 -0.72658 -0.00052956 0.20467 0.00014917 728.830944640418 736.845813614204 36.162 0.56205 36.162 35.875 36.437 -3.8147E-06 157 44 5 0 0 0 2.287E-06 1 20457 92.269 77.297 4 1.3189 1.05 0 11788000 4935300 6852400 869 123 423 477 1384 1384 180;181;182 DKLDETGNSLK 11 2 0 Unmodified _DKLDETGNSLK_ 0 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 610.3123 2 610.311874 1218.6092 79382.86 0.3449 0.0002105 0.10541 6.4335E-05 0.45031 0.00027483 610.311911463427 618.326190336909 68.748 1.776 68.748 68.48 70.256 7.6294E-06 775 174 7 0 0 0 6.2235E-86 4 34500 202.31 117.56 1 0.76202 1.0012 0 248840000 134730000 114110000 870 962 424 478 1385;1386;1387;1388 1387 DKLDETGNSLK 11 2 0 Unmodified _DKLDETGNSLK_ 0 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 618.3268 2 610.311874 1218.6092 77545.21 0.36496 0.00022274 0.36663 0.00022376 0.73159 0.0004465 610.312216981075 618.326271249199 24.039 1.0824 24.039 23.755 24.838 0 341 60 10 0 0 0 1.5884E-34 2 10280 161.19 89.498 1 1.2884 0.94878 0 323470000 148580000 174880000 871 962 424 478 1389;1390 1389 DKLDETGVALK 11 2 0 Unmodified _DKLDETGVALK_ 0 0 0 1 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 594.8261 2 594.82716 1187.63977 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.37 1 86.37 85.87 86.87 0 0 0 0 0.0062909 1 46785 88.495 30.906 1 872 1032 425 479 1391 1391 DKSDSPAIQLR 11 1 1 Phospho (STY) _DKSDS(ph)PAIQLR_ DKSDS(1)PAIQLR DKS(-37.84)DS(37.84)PAIQLR 0 0 1 1 Q96ST3;B3KQE3 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 655.3116 2 655.311024 1308.6075 75760.37 1.2454 0.00081613 -0.12765 -8.3653E-05 1.1178 0.00073248 655.310864883906 664.322204924698 50.566 1.2965 50.566 50.051 51.348 0 434 117 6 0 0 0 0.00038077 1 30551 85.45 71.243 2 0.83827 0.64335 0 13585000 7012000 6572900 873 1187 426 480 1392 1392 2337 DKSPVREPIDNLTPEER 17 1 2 Phospho (STY) _DKS(ph)PVREPIDNLTPEER_ DKS(1)PVREPIDNLTPEER DKS(116.02)PVREPIDNLT(-116.02)PEER 0 0 1 2 H0Y4X3;G3XAC6;B4DRA0;B4DLM0;B3KWX7;Q68DD9;B4E1M7;Q14498;Q5QP22;Q5QP23 H0Y4X3 H0Y4X3 RBM39;DKFZp781C0423 RNA-binding protein 39 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 702.0097 3 692.331681 2073.97321 72486.34 0.58952 0.00040814 -0.14345 -9.9318E-05 0.44606 0.00030882 692.331685192454 701.675126892735 92.003 1.3579 92.003 91.383 92.741 0 900 118 10 0 0 0 1.8058E-44 4 51312 146.6 132.34 2 0.77985 0.93225 0 375970000 219900000 156070000 874 608 427 481 1393;1394;1395;1396 1396 1005 DKSPVREPIDNLTPEER 17 1 2 Phospho (STY) _DKS(ph)PVREPIDNLTPEER_ DKS(1)PVREPIDNLTPEER DKS(33.81)PVREPIDNLT(-33.81)PEER 0 0 1 2 H0Y4X3;G3XAC6;B4DRA0;B4DLM0;B3KWX7;Q68DD9;B4E1M7;Q14498;Q5QP22;Q5QP23 H0Y4X3 H0Y4X3 RBM39;DKFZp781C0423 RNA-binding protein 39 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 519.752 4 519.50058 2073.97321 82651.11 0.72846 0.00037843 0.0085271 4.4298E-06 0.73699 0.00038286 519.751460887953 526.508183345896 72.574 1.6567 72.574 71.741 73.398 0 605 139 6 0 0 0 0.00018854 1 45877 42.633 27.478 2 0.45452 0.42577 0 30047000 17414000 12633000 875 608 427 481 1397 1397 1005 DKSPVREPIDNLTPEER 17 1 2 Phospho (STY) _DKS(ph)PVREPIDNLTPEER_ DKS(1)PVREPIDNLTPEER DKS(56.17)PVREPIDNLT(-56.17)PEER 0 0 1 2 H0Y4X3;G3XAC6;B4DRA0;B4DLM0;B3KWX7;Q68DD9;B4E1M7;Q14498;Q5QP22;Q5QP23 H0Y4X3 H0Y4X3 RBM39;DKFZp781C0423 RNA-binding protein 39 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 692.6666 3 692.331681 2073.97321 72196.29 0.96592 0.00066874 0.024788 1.7161E-05 0.99071 0.0006859 692.665991094005 701.675284203688 72.626 2.2018 72.626 71.807 74.009 0 1650 198 11 0 0 0 4.024E-08 2 46583 81.373 66.678 2 0.48583 0.41333 0 389440000 253850000 135590000 876 608 427 481 1398;1399 1399 1005 DKYIMLTIK 9 2 0 Oxidation (M),Phospho (STY) _DKYIM(ox)LT(ph)IK_ DKYIM(1)LTIK DKY(0.417)IMLT(0.583)IK DKYIM(60.44)LTIK DKY(-1.46)IMLT(1.46)IK 0 1 1 1 A0A126LB20 A0A126LB20 A0A126LB20 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 618.8184 2 610.803458 1219.59236 NaN NaN NaN 0.78532 0.00047967 NaN NaN NaN NaN 67.159 0.50098 67.159 66.978 67.478 0 0 0 0 0.0026697 1 32908 60.436 11.018 2 NaN NaN 0 18270000 0 18270000 877 374 428 482 1400 1400 90 2697 DKYIMLTIK 9 2 0 Oxidation (M),Phospho (STY) _DKYIM(ox)LT(ph)IK_ DKYIM(1)LTIK DKY(0.44)IMLT(0.56)IK DKYIM(40.35)LTIK DKY(-1.05)IMLT(1.05)IK 0 1 1 1 A0A126LB20 A0A126LB20 A0A126LB20 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 618.819 2 610.803458 1219.59236 NaN NaN NaN 0.99269 0.00060634 NaN NaN NaN NaN 72.528 0.26601 72.528 72.375 72.641 0 0 0 0 0.010738 1 36670 40.352 8.0314 2 NaN NaN 0 11279000 0 11279000 878 374 428 482 1401 1401 90 2697 DKYIMLTIK 9 2 0 Oxidation (M),Phospho (STY) _DKYIM(ox)LT(ph)IK_ DKYIM(1)LTIK DKY(0.419)IMLT(0.581)IK DKYIM(52.48)LTIK DKY(-1.42)IMLT(1.42)IK 0 1 1 1 A0A126LB20 A0A126LB20 A0A126LB20 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 610.8043 2 610.803458 1219.59236 77242.16 0.77595 0.00047395 0.95385 0.00058262 1.7298 0.0010566 610.803843216253 618.818269358903 26.9 0.89206 26.9 26.602 27.494 1.9073E-06 148 51 8 0 0 0 0.0050553 1 12951 52.482 8.1327 2 1.5137 1.2067 0 30281000 11456000 18825000 879 374 428 482 1402 1402 90 2697 DLASPLIGR 9 0 1 Phospho (STY) _DLAS(ph)PLIGR_ DLAS(1)PLIGR DLAS(49.3)PLIGR 0 0 1 0 Q7Z4Z4;Q5U0M0;Q53HG9;O95067;H0YMP3 Q7Z4Z4 Q7Z4Z4 CCNB2 G2/mitotic-specific cyclin-B2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 511.2577 2 511.257532 1020.50051 NaN NaN NaN 2.195 0.0011222 NaN NaN NaN NaN 103.35 0.66473 103.35 103.17 103.84 0 0 0 0 0.012235 1 59698 49.3 28.523 1 NaN NaN 0 3551400 3551400 0 880 940 429 483 1403 1403 1607 DLASPLIGRS 10 0 1 Phospho (STY) _DLASPLIGRS(ph)_ DLASPLIGRS(1) DLAS(-40.31)PLIGRS(40.31) 0 0 1 1 Q7Z4Z4;Q5U0M0;Q53HG9;O95067;H0YMP3 Q7Z4Z4 Q7Z4Z4 CCNB2 G2/mitotic-specific cyclin-B2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 554.7744 2 554.773546 1107.53254 81485.91 0.7618 0.00042263 0.094495 5.2424E-05 0.8563 0.00047505 554.773460647225 559.777585474006 98.179 1.5471 98.179 97.243 98.79 0 312 128 5 0 0 0 9.0857E-05 4 55663 89.403 68.626 2 0.68561 0.85673 0 39272000 23259000 16013000 881 940 430 484 1404;1405;1406;1407 1406 1607;1608 DLASPLIGRS 10 0 1 Phospho (STY) _DLASPLIGRS(ph)_ DLAS(0.008)PLIGRS(0.992) DLAS(-20.99)PLIGRS(20.99) 0 0 1 1 Q7Z4Z4;Q5U0M0;Q53HG9;O95067;H0YMP3 Q7Z4Z4 Q7Z4Z4 CCNB2 G2/mitotic-specific cyclin-B2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 559.7778 2 554.773546 1107.53254 NaN NaN NaN 0.12546 6.9602E-05 NaN NaN NaN NaN 97.724 0.27361 97.724 97.549 97.822 0 0 0 0 3.7957E-05 1 55298 85.813 44.273 2 NaN NaN 0 8359400 0 8359400 882 940 430 484 1408 1408 1607;1608 DLASPLIGRS 10 0 1 Phospho (STY) _DLASPLIGRS(ph)_ DLAS(0.001)PLIGRS(0.999) DLAS(-32.11)PLIGRS(32.11) 0 0 1 1 Q7Z4Z4;Q5U0M0;Q53HG9;O95067;H0YMP3 Q7Z4Z4 Q7Z4Z4 CCNB2 G2/mitotic-specific cyclin-B2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 554.7738 2 554.773546 1107.53254 82411.28 0.83755 0.00046465 -0.25777 -0.00014301 0.57978 0.00032165 554.773298832539 559.777505172396 103 0.9147 103 102.59 103.51 0 315 87 5 0 0 0 0.0028189 3 66567 64.04 47.837 2 0.91386 0.71381 0 15119000 7892800 7226600 883 940 430 484 1409;1410;1411 1411 1607;1608 DLASPLIGRS 10 0 1 Phospho (STY) _DLASPLIGRS(ph)_ DLAS(0.025)PLIGRS(0.975) DLAS(-15.96)PLIGRS(15.96) 0 0 1 1 Q7Z4Z4;Q5U0M0;Q53HG9;O95067;H0YMP3 Q7Z4Z4 Q7Z4Z4 CCNB2 G2/mitotic-specific cyclin-B2 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 559.7784 2 554.773546 1107.53254 NaN NaN NaN NaN NaN NaN NaN NaN NaN 102.59 1 102.59 102.09 103.09 0 0 0 0 0.01747 1 66037 42.348 23.618 2 884 940 430 484 1412 1412 1607;1608 DLAVPAALTPR 11 0 1 Phospho (STY) _DLAVPAALT(ph)PR_ DLAVPAALT(1)PR DLAVPAALT(85.67)PR 0 0 1 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 602.3101 2 602.310296 1202.60604 78575.3 0.78323 0.00047175 0.2783 0.00016763 1.0615 0.00063937 602.310294199501 607.314665400314 103.88 1.0436 103.88 103.47 104.51 0 291 78 5 0 0 0 0.0036431 1 59937 85.672 62.892 1 0.48582 0.59743 0 26790000 16021000 10769000 885 1164 431 485 1413 1413 2964 DLDAITDISPK 11 1 0 Phospho (STY) _DLDAIT(ph)DISPK_ DLDAIT(0.505)DIS(0.495)PK DLDAIT(0.09)DIS(-0.09)PK 0 0 1 0 Q75MV2;B3KU58;Q8N718;B3KNK8;Q9Y2L8 Q75MV2 Q75MV2 ZFP95;ZKSCAN5 Zinc finger protein with KRAB and SCAN domains 5 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 638.3017 2 634.294508 1266.57446 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.61 1 108.61 108.11 109.11 -7.6294E-06 0 0 0 0.027162 1 69886 49.423 20.082 2 886 584 432 486 1414 1414 2771 DLDAITDISPK 11 1 0 Phospho (STY) _DLDAIT(ph)DISPK_ DLDAIT(0.786)DIS(0.214)PK DLDAIT(5.66)DIS(-5.66)PK 0 0 1 0 Q75MV2;B3KU58;Q8N718;B3KNK8;Q9Y2L8 Q75MV2 Q75MV2 ZFP95;ZKSCAN5 Zinc finger protein with KRAB and SCAN domains 5 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 638.3015 2 634.294508 1266.57446 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.85 1 108.85 108.35 109.35 0 0 0 0 0.007124 1 70044 63.091 25.41 2 887 584 432 486 1415 1415 2771 DLDEDANGITDEGK 14 1 0 Unmodified _DLDEDANGITDEGK_ 0 0 0 0 Q5QJE6;J3KP30 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 750.334 2 746.325907 1490.63726 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.592 1 65.592 65.092 66.092 0 0 0 0 2.8581E-05 1 31635 80.245 33.047 1 888 1097 433 487 1416 1416 DLDEDELLGNLSETELK 17 1 0 Phospho (STY) _DLDEDELLGNLS(ph)ETELK_ DLDEDELLGNLS(0.945)ET(0.055)ELK DLDEDELLGNLS(12.37)ET(-12.37)ELK 0 0 1 0 H0YNU8;Q5HYL6;Q9NYL9 H0YNU8 H0YNU8 TMOD3;DKFZp686E1899 Tropomodulin-3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1007.4529 2 1006.95102 2011.88748 60774.75 0.46502 0.00046826 0.26364 0.00026547 0.72866 0.00073373 1006.95097529911 1010.9582486264 125.29 0.80638 125.29 124.94 125.74 0 575 75 10 0 0 0 2.075E-61 4 75778 161.08 130.19 2 1.2864 1.593 0 169150000 78155000 90991000 889 865 434 488 1417;1418;1419;1420 1419 1474 DLDEDELLGNLSETELK 17 1 0 Phospho (STY) _DLDEDELLGNLS(ph)ETELK_ DLDEDELLGNLS(0.938)ET(0.062)ELK DLDEDELLGNLS(11.79)ET(-11.79)ELK 0 0 1 0 H0YNU8;Q5HYL6;Q9NYL9 H0YNU8 H0YNU8 TMOD3;DKFZp686E1899 Tropomodulin-3 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1010.9586 2 1006.95102 2011.88748 NaN NaN NaN 0.40332 0.00040612 NaN NaN NaN NaN 134.53 0.47139 134.53 134.34 134.81 0 0 0 0 2.3785E-40 1 86861 124.46 96.691 2 NaN NaN 0 110960000 0 110960000 890 865 434 488 1421 1421 1474 DLDILHNSSQMK 12 1 0 Oxidation (M),Phospho (STY) _DLDILHNS(ph)SQM(ox)K_ DLDILHNSSQM(1)K DLDILHNS(0.5)S(0.5)QMK DLDILHNSSQM(68)K DLDILHNS(0)S(0)QMK 0 1 1 0 A0A024RD28;Q7L2Z9 A0A024RD28 A0A024RD28 C6orf139;CENPQ Centromere protein Q ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 748.8278 2 748.826181 1495.63781 NaN NaN NaN -0.39602 -0.00029655 NaN NaN NaN NaN 81.033 0.33831 81.033 80.805 81.143 0 0 0 0 0.0017191 1 43041 67.997 37.108 2 NaN NaN 0 5708300 5708300 0 891 221 435 489 1422 1422 55 346;347 DLDILHNSSQMK 12 1 0 Oxidation (M),Phospho (STY) _DLDILHNS(ph)SQM(ox)K_ DLDILHNSSQM(1)K DLDILHNS(0.5)S(0.5)QMK DLDILHNSSQM(79.49)K DLDILHNS(0)S(0)QMK 0 1 1 0 A0A024RD28;Q7L2Z9 A0A024RD28 A0A024RD28 C6orf139;CENPQ Centromere protein Q MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 752.8329 2 748.826181 1495.63781 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.885 1 80.885 80.385 81.385 0 0 0 0 2.379E-05 1 42928 79.492 50.405 2 892 221 435 489 1423 1423 55 346;347 DLDILHNSSQMK 12 1 0 Oxidation (M),Phospho (STY) _DLDILHNS(ph)SQM(ox)K_ DLDILHNSSQM(1)K DLDILHNS(0.663)S(0.337)QMK DLDILHNSSQM(120.87)K DLDILHNS(2.94)S(-2.94)QMK 0 1 1 0 A0A024RD28;Q7L2Z9 A0A024RD28 A0A024RD28 C6orf139;CENPQ Centromere protein Q MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 752.8337 2 748.826181 1495.63781 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.189 1 81.189 80.689 81.689 -7.6294E-06 0 0 0 6.4514E-08 1 43163 120.87 92.473 2 893 221 435 489 1424 1424 55 346;347 DLDILHNSSQMK 12 1 0 Oxidation (M),Phospho (STY) _DLDILHNS(ph)SQM(ox)K_ DLDILHNSSQM(1)K DLDILHNS(0.5)S(0.5)QMK DLDILHNSSQM(55.04)K DLDILHNS(0)S(0)QMK 0 1 1 0 A0A024RD28;Q7L2Z9 A0A024RD28 A0A024RD28 C6orf139;CENPQ Centromere protein Q MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 748.8273 2 748.826181 1495.63781 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.412 1 81.412 80.912 81.912 0 0 0 0 0.00099049 1 43311 55.04 38.467 2 894 221 435 489 1425 1425 55 346;347 DLDILHNSSQMK 12 1 0 Oxidation (M),Phospho (STY) _DLDILHNS(ph)SQM(ox)K_ DLDILHNSSQM(1)K DLDILHNS(0.5)S(0.5)QMK DLDILHNSSQM(41.48)K DLDILHNS(0)S(0)QMK 0 1 1 0 A0A024RD28;Q7L2Z9 A0A024RD28 A0A024RD28 C6orf139;CENPQ Centromere protein Q MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 748.8261 2 748.826181 1495.63781 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.592 1 81.592 81.092 82.092 0 0 0 0 0.013151 1 43442 41.48 30.555 2 895 221 435 489 1426 1426 55 346;347 DLDLEPLSDLEEGLEETR 18 0 1 Phospho (STY) _DLDLEPLS(ph)DLEEGLEETR_ DLDLEPLS(0.98)DLEEGLEET(0.02)R DLDLEPLS(16.79)DLEEGLEET(-16.79)R 0 0 1 0 P29375 P29375 P29375 KDM5A Lysine-specific demethylase 5A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1076.9796 2 1076.9803 2151.94606 57423.1 0.72032 0.00077577 -1.5715 -0.0016925 -0.85121 -0.00091674 1077.47992889293 1082.48481171026 134.88 0.27039 134.88 134.63 134.9 0 28 7 6 0 0 0 0.00018835 1 87148 44.457 38.973 2 1.1892 0.89554 0 20332000 9139900 11192000 896 980 436 490 1427 1427 1734 DLDSPFFGIR 10 0 1 Phospho (STY) _DLDS(ph)PFFGIR_ DLDS(1)PFFGIR DLDS(49.35)PFFGIR 0 0 1 0 Q96C92 Q96C92 Q96C92 SDCCAG3 Serologically defined colon cancer antigen 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 628.7834 2 623.778828 1245.5431 79497.53 0.92321 0.00057588 -0.34164 -0.00021311 0.58157 0.00036277 623.778579572519 628.782828573857 128.92 0.87634 128.92 128.57 129.44 0 276 73 5 0 0 0 0.013225 1 78159 49.35 25.601 1 1.9183 2.2798 0 15459000 6021800 9437300 897 1172 437 491 1428 1428 2304 DLEAHIDSANK 11 1 0 Unmodified _DLEAHIDSANK_ 0 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 606.7961 2 606.796392 1211.57823 78464.79 0.55793 0.00033855 0.085693 5.1998E-05 0.64363 0.00039055 606.796329401903 610.803479873204 72.583 0.86349 72.583 72.263 73.127 0 320 71 6 0 0 0 2.0523E-26 2 36680 156.26 109.18 1 1.8098 2.2495 0 89683000 28585000 61098000 898 49 438 492 1429;1430 1430 DLEAHIDSANK 11 1 0 Unmodified _DLEAHIDSANK_ 0 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 606.7965 2 606.796392 1211.57823 78856.66 0.86054 0.00052217 -0.089274 -5.4171E-05 0.77126 0.000468 606.796470899243 610.803399255858 30.489 0.79563 30.489 30.172 30.968 0 266 59 8 0 0 0 1.6211E-08 2 15893 115.57 86.246 1 2.7164 1.7709 0 32603000 9524000 23079000 899 49 438 492 1431;1432 1432 DLEASHQHSSPNEQLK 16 1 0 Phospho (STY) _DLEASHQHS(ph)SPNEQLK_ DLEAS(0.034)HQHS(0.561)S(0.405)PNEQLK DLEAS(-12.2)HQHS(1.41)S(-1.41)PNEQLK 0 0 1 0 A0A024R0C7;Q9P2B4 A0A024R0C7 A0A024R0C7 CTTNBP2NL CTTNBP2 N-terminal-like protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 636.9524 3 633.945938 1898.81598 77285.4 0.74898 0.00047481 -0.46873 -0.00029715 0.28025 0.00017766 633.946122278366 636.617496467167 63.937 0.24912 63.937 63.814 64.063 0 92 17 10 0 0 0 1.0461E-06 1 30260 75.773 46.499 3 1.5036 1.8891 0 54548000 21604000 32944000 900 25 439 493 1433 1433 31 DLEASHQHSSPNEQLK 16 1 0 Phospho (STY) _DLEASHQHS(ph)SPNEQLK_ DLEASHQHS(0.617)S(0.383)PNEQLK DLEAS(-48.7)HQHS(2.07)S(-2.07)PNEQLK 0 0 1 0 A0A024R0C7;Q9P2B4 A0A024R0C7 A0A024R0C7 CTTNBP2NL CTTNBP2 N-terminal-like protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 636.6181 3 633.945938 1898.81598 75367.4 0.33488 0.0002123 1.0154 0.00064371 1.3503 0.000856 634.280663321732 636.952448920704 23.188 0.44153 23.188 23.009 23.451 0 124 23 9 0 0 0 3.8575E-17 2 9673 109.32 64.929 3 1.1258 0.73258 0 39708000 20191000 19518000 901 25 439 493 1434;1435 1434 31 DLEEDHACIPIK 12 1 0 Unmodified _DLEEDHACIPIK_ 0 0 0 0 P13639;Q8TA90;Q6PK56;B4DPU3 P13639 P13639 EEF2 Elongation factor 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 724.3528 2 720.345391 1438.67623 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.95 1 92.95 92.45 93.45 7.6294E-06 0 0 0 0.0091752 1 51676 45.161 23.075 1 902 964 440 494 1436 1436 DLEEDHACIPIKK 13 2 0 Unmodified _DLEEDHACIPIKK_ 0 0 0 1 P13639;Q8TA90;Q6PK56;B4DPU3 P13639 P13639 EEF2 Elongation factor 2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 528.6076 3 523.264341 1566.77119 NaN NaN NaN 0.51324 0.00026856 NaN NaN NaN NaN 97.094 0.26237 97.094 96.939 97.201 0 0 0 0 0.0056175 1 54935 41.401 8.9029 1 NaN NaN 0 15513000 0 15513000 903 964 441 495 1437 1437 DLEGLSQR 8 0 1 Unmodified _DLEGLSQR_ 0 0 0 0 A0A024R1N1;P35579;A0A0U4BW16 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 464.2426 2 459.237981 916.461409 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.742 1 40.742 40.242 41.242 0 0 0 0 0.031845 1 23689 43.808 8.9836 1 904 49 442 496 1438 1438 DLELEMGDDYILDLQK 16 1 0 Oxidation (M) _DLELEM(ox)GDDYILDLQK_ DLELEM(1)GDDYILDLQK DLELEM(57.84)GDDYILDLQK 0 1 0 0 Q53GS0;D2CFK9;Q9BZE4;Q8N4P8;B4DHR2;O60747 Q53GS0 Q53GS0 GTPBP4 Nucleolar GTP-binding protein 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 963.9568 2 963.456064 1924.89757 NaN NaN NaN 0.25233 0.00024311 NaN NaN NaN NaN 122.92 0.40071 122.92 122.6 123 0 0 0 0 2.1687E-05 1 74346 57.836 41.204 1 NaN NaN 0 3599700 3599700 0 905 762 443 497 1439 1439 205 DLFAFQESPPR 11 0 1 Phospho (STY) _DLFAFQES(ph)PPR_ DLFAFQES(1)PPR DLFAFQES(42.81)PPR 0 0 1 0 E7EX48;A0A059V7J1;P51957 E7EX48 E7EX48 NEK4 Serine/threonine-protein kinase Nek4 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 693.8087 2 693.808117 1385.60168 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.82 1 116.82 116.32 117.32 0 0 0 0 0.012919 1 69889 42.809 31.277 1 906 234 444 498 1440 1440 362 DLFDLNSSEEDDTEGFSER 19 0 1 Phospho (STY) _DLFDLNS(ph)SEEDDTEGFSER_ DLFDLNS(0.5)S(0.5)EEDDTEGFSER DLFDLNS(0)S(0)EEDDT(-38.22)EGFS(-62.67)ER 0 0 1 0 Q9Y3T9;Q9H9J5;Q8NAK7 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1147.9459 2 1142.94191 2283.86926 58021.18 0.21216 0.00024249 -0.068755 -7.8583E-05 0.14341 0.0001639 1143.44372457513 1147.94636506498 121.28 0.75581 121.28 120.94 121.69 0 451 60 9 0 0 0 1.891E-17 2 73265 96.544 91.457 4 0.7466 0.94218 0 74365000 43012000 31353000 907 1252 445 499 1441;1442 1442 2575;2576 DLFDLNSSEEDDTEGFSER 19 0 1 Phospho (STY) _DLFDLNSS(ph)EEDDTEGFSER_ DLFDLNS(0.037)S(0.96)EEDDT(0.003)EGFSER DLFDLNS(-14.18)S(14.18)EEDDT(-24.73)EGFS(-52.78)ER 0 0 1 0 Q9Y3T9;Q9H9J5;Q8NAK7 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1147.9474 2 1142.94191 2283.86926 57985.08 0.23378 0.0002672 -0.3208 -0.00036665 -0.087014 -9.9452E-05 1143.44350822806 1148.44561204348 122.13 0.99269 122.13 121.63 122.62 -7.6294E-06 496 72 10 0 0 0 2.5015E-73 3 73824 159.8 139.07 4 1.1432 1.4428 0 79066000 35611000 43455000 908 1252 445 499 1443;1444;1445 1445 2575;2576 DLFDLNSSEEDDTEGFSER 19 0 1 Phospho (STY) _DLFDLNSS(ph)EEDDTEGFSER_ DLFDLNS(0.228)S(0.77)EEDDT(0.002)EGFSER DLFDLNS(-5.28)S(5.28)EEDDT(-25.3)EGFS(-47.89)ER 0 0 1 0 Q9Y3T9;Q9H9J5;Q8NAK7 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1148.4481 2 1142.94191 2283.86926 57213.39 0.55243 0.0006314 0.0064244 7.3427E-06 0.55886 0.00063874 1142.9422969953 1147.94626724924 131.7 1.0174 131.7 131.15 132.17 0 702 97 12 0 0 0 5.5657E-10 2 85021 77.468 67.142 4 1.3655 0.91291 0 130670000 56060000 74613000 909 1252 445 499 1446;1447 1447 2575;2576 DLFDLNSSEEDDTEGFSER 19 0 1 2 Phospho (STY) _DLFDLNS(ph)S(ph)EEDDTEGFSER_ DLFDLNS(0.999)S(0.999)EEDDT(0.002)EGFSER DLFDLNS(29.32)S(29.32)EEDDT(-29.32)EGFS(-60.56)ER 0 0 2 0 Q9Y3T9;Q9H9J5;Q8NAK7 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1187.9293 2 1182.92507 2363.83559 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.71 1 131.71 131.21 132.21 0 0 0 0 2.7086E-10 1 80122 107.65 96.206 6 910 1252 445 500 1448 1448 2575;2576 DLFDLNSSEEDDTEGFSER 19 0 1 2 Phospho (STY) _DLFDLNS(ph)S(ph)EEDDTEGFSER_ DLFDLNS(1)S(1)EEDDTEGFSER DLFDLNS(51.23)S(49.77)EEDDT(-49.77)EGFS(-83.84)ER 0 0 2 0 Q9Y3T9;Q9H9J5;Q8NAK7 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1187.9933 2 1182.92507 2363.83559 NaN NaN NaN NaN NaN NaN NaN NaN NaN 134.87 1 134.87 134.37 135.37 0 0 0 0 3.896E-54 1 87127 163.79 145.68 6 911 1252 445 500 1449 1449 2575;2576 DLFDLNSSEEDDTEGFSER 19 0 1 2 Phospho (STY) _DLFDLNS(ph)S(ph)EEDDTEGFSER_ DLFDLNS(0.991)S(0.991)EEDDT(0.016)EGFS(0.002)ER DLFDLNS(21.19)S(21.19)EEDDT(-21.19)EGFS(-32.63)ER 0 0 2 0 Q9Y3T9;Q9H9J5;Q8NAK7 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1182.9241 2 1182.92507 2363.83559 NaN NaN NaN NaN NaN NaN NaN NaN NaN 145.5 1 145.5 145 146 0 0 0 0 0.004426 1 89276 40.941 28.381 6 912 1252 445 500 1450 1450 2575;2576 DLFDYSPPLHK 11 1 0 Phospho (STY) _DLFDYS(ph)PPLHK_ DLFDYS(1)PPLHK DLFDY(-82.52)S(82.52)PPLHK 0 0 1 0 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 710.3261 2 706.318318 1410.62208 71677.65 0.8675 0.00061273 -0.05124 -3.6192E-05 0.81626 0.00057654 706.318407437116 710.325350422048 111.22 1.6983 111.22 110.46 112.15 0 1082 146 11 0 0 0 2.1648E-35 4 65822 164.81 133.21 2 1.0789 1.3297 0 1532300000 740240000 792060000 913 809 446 501 1451;1452;1453;1454 1453 1391 DLFDYSPPLHK 11 1 0 Phospho (STY) _DLFDYS(ph)PPLHK_ DLFDYS(1)PPLHK DLFDY(-39.8)S(39.8)PPLHK 0 0 1 0 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 473.8865 3 471.214637 1410.62208 88185.05 0.25016 0.00011788 -0.080585 -3.7973E-05 0.16958 7.9908E-05 471.214695153916 473.885846635491 111.22 1.2053 111.22 110.57 111.77 0 648 102 8 0 0 0 0.0017813 1 65967 69.345 54.143 2 1.0853 1.3424 0 297290000 139870000 157420000 914 809 446 501 1455 1455 1391 DLFDYSPPLHK 11 1 0 Phospho (STY) _DLFDYS(ph)PPLHK_ DLFDY(0.002)S(0.998)PPLHK DLFDY(-27.26)S(27.26)PPLHK 0 0 1 0 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 706.8196 2 706.318318 1410.62208 NaN NaN NaN 0.46218 0.00032645 NaN NaN NaN NaN 112.32 0.28018 112.32 112.2 112.48 0 0 0 0 0.01147 1 66645 51.286 35.747 2 NaN NaN 0 6295700 6295700 0 915 809 446 501 1456 1456 1391 DLFDYSPPLHK 11 1 0 Phospho (STY) _DLFDYS(ph)PPLHK_ DLFDY(0.008)S(0.992)PPLHK DLFDY(-21.19)S(21.19)PPLHK 0 0 1 0 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 710.3262 2 706.318318 1410.62208 72731.66 1.1749 0.00082987 0.011638 8.2198E-06 1.1866 0.00083809 706.318644931876 710.325361756488 113.66 3.1499 113.66 112.96 116.11 0 1652 289 10 0 0 0 0.0020979 6 73784 73.466 51.269 2 1.2686 0.84562 0 855100000 373750000 481350000 916 809 446 501 1457;1458;1459;1460;1461;1462 1460 1391 DLFDYSPPLHK 11 1 0 Phospho (STY) _DLFDYS(ph)PPLHK_ DLFDYS(1)PPLHK DLFDY(-46.98)S(46.98)PPLHK 0 0 1 0 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 471.2146 3 471.214637 1410.62208 87096.04 0.728 0.00034305 -0.334 -0.00015739 0.394 0.00018566 471.214489547364 473.885809324843 113.69 1.4285 113.69 113.1 114.52 7.6294E-06 892 134 9 0 0 0 0.00099068 4 73402 72.681 53.47 2 1.2748 0.84958 0 103090000 43523000 59569000 917 809 446 501 1463;1464;1465;1466 1466 1391 DLFDYSPPLHK 11 1 0 Phospho (STY) _DLFDYS(ph)PPLHK_ DLFDY(0.008)S(0.992)PPLHK DLFDY(-21.14)S(21.14)PPLHK 0 0 1 0 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 710.3257 2 706.318318 1410.62208 74708.43 1.1274 0.00079628 -0.61388 -0.00043359 0.51348 0.00036268 706.317814627509 710.325021957709 143.87 0.20944 143.87 143.74 143.95 0 91 21 6 0 0 0 0.013203 1 88758 47.189 24.715 2 1.3504 1.2106 0 1435900 598350 837590 918 809 446 501 1467 1467 1391 DLFSLDSEDPSPASPPLR 18 0 1 Phospho (STY) _DLFSLDSEDPSPAS(ph)PPLR_ DLFSLDS(0.005)EDPS(0.229)PAS(0.765)PPLR DLFS(-39.77)LDS(-21.85)EDPS(-5.23)PAS(5.23)PPLR 0 0 1 0 H3BTX0;Q9BTK6 H3BTX0 H3BTX0 PAGR1 PAXIP1-associated glutamate-rich protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1016.9608 2 1011.95643 2021.89832 61132.36 0.43656 0.00044178 0.67238 0.00068042 1.1089 0.0011222 1012.45876944768 1017.46279220152 126.61 0.55049 126.61 126.29 126.84 0 180 47 6 0 0 0 5.99E-05 1 76823 51.147 47.045 4 0.74901 0.83945 0 10010000 5508900 4501300 919 874 447 502 1468 1468 1483 DLGEELEALK 10 1 0 Unmodified _DLGEELEALK_ 0 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q7Z7R0;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749 A0A024R1N1 A0A024R1N1 MYH9;MYH11 Myosin-9;Myosin-11 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 562.8005 2 558.792786 1115.57102 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.11 1 110.11 109.61 110.61 0 0 0 0 0.0045957 1 64932 64.04 38.481 1 920 49 448 503 1469 1469 DLIDNSFNR 9 0 1 Phospho (STY) _DLIDNS(ph)FNR_ DLIDNS(1)FNR DLIDNS(175.41)FNR 0 0 1 0 B4DKU3;Q8IY81 B4DKU3 B4DKU3 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 592.2552 2 587.250435 1172.48632 80586.91 0.72324 0.00042472 0.19443 0.00011418 0.91767 0.0005389 587.250337792212 592.254531199879 81.889 1.4306 81.889 81.284 82.714 0 467 136 6 0 0 0 3.5499E-40 4 43874 175.41 130.43 1 0.78061 0.98402 0 61081000 35274000 25807000 921 632 449 504 1470;1471;1472;1473 1473 1040 DLIDNSFNR 9 0 1 Phospho (STY) _DLIDNS(ph)FNR_ DLIDNS(1)FNR DLIDNS(104.43)FNR 0 0 1 0 B4DKU3;Q8IY81 B4DKU3 B4DKU3 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 587.2505 2 587.250435 1172.48632 78592.99 0.75758 0.00044489 0.036839 2.1634E-05 0.79442 0.00046652 587.250451855181 592.254520901072 84.558 1.2386 84.558 84.084 85.322 0 617 111 8 0 0 0 5.5352E-05 4 54527 104.43 74.66 1 0.86397 0.58604 0 63616000 31198000 32417000 922 632 449 504 1474;1475;1476;1477 1476 1040 DLISLDSSPAK 11 1 0 Phospho (STY) _DLISLDSS(ph)PAK_ DLIS(0.008)LDS(0.163)S(0.829)PAK DLIS(-19.91)LDS(-7.07)S(7.07)PAK 0 0 1 0 B4E3N9;B4DX26;Q9UN79 B4E3N9 B4E3N9 SOX13 Transcription factor SOX-13 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 617.2971 2 613.289226 1224.5639 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.37 1 98.37 97.87 98.87 -7.6294E-06 0 0 0 0.0010974 1 55860 66.267 32.391 3 923 669 450 505 1478 1478 1112 DLISNSPR 8 0 1 Phospho (STY) _DLISNS(ph)PR_ DLIS(0.132)NS(0.868)PR DLIS(-8.17)NS(8.17)PR 0 0 1 0 B7Z377;Q6FGR6;B7Z6D1;P19387 B7Z377 B7Z377 POLR2C DNA-directed RNA polymerase II subunit RPB3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 496.2284 2 491.223689 980.432825 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.201 1 54.201 53.701 54.701 3.8147E-06 0 0 0 0.010851 1 22896 53.327 31.863 2 924 702 451 506 1479 1479 1158;1159 DLISNSPR 8 0 1 Phospho (STY) _DLIS(ph)NSPR_ DLIS(0.697)NS(0.303)PR DLIS(3.62)NS(-3.62)PR 0 0 1 0 B7Z377;Q6FGR6;B7Z6D1;P19387 B7Z377 B7Z377 POLR2C DNA-directed RNA polymerase II subunit RPB3 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 491.2246 2 491.223689 980.432825 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.598 1 54.598 54.098 55.098 0 0 0 0 0.016356 1 23147 45.161 15.688 2 925 702 451 506 1480 1480 1158;1159 DLLHPSLEEEK 11 1 0 Unmodified _DLLHPSLEEEK_ 0 0 0 0 C9JLI6;H0YMV8;Q71UM5 C9JLI6 C9JLI6 RPS27L 40S ribosomal protein S27;40S ribosomal protein S27-like MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 655.3354 2 655.33535 1308.65615 77325.27 0.85699 0.00056161 -0.56787 -0.00037214 0.28912 0.00018947 655.335004512851 659.341699136607 98.391 1.0724 98.391 97.798 98.87 -7.6294E-06 310 86 7 0 0 0 3.5771E-08 1 56086 110.38 88.296 1 0.65244 0.82466 0 45693000 29774000 15919000 926 743 452 507 1481 1481 DLLHPSLEEEK 11 1 0 Unmodified _DLLHPSLEEEK_ 0 0 0 0 C9JLI6;H0YMV8;Q71UM5 C9JLI6 C9JLI6 RPS27L 40S ribosomal protein S27;40S ribosomal protein S27-like MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 655.3378 2 655.33535 1308.65615 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.99 1 97.99 97.49 98.49 -7.6294E-06 0 0 0 0.0002813 1 55574 77.192 44.351 1 927 743 452 507 1482 1482 DLLHPSPEEEK 11 1 0 Phospho (STY) _DLLHPS(ph)PEEEK_ DLLHPS(1)PEEEK DLLHPS(203.87)PEEEK 0 0 1 0 Q5T4L4;P42677 Q5T4L4 Q5T4L4 RPS27 40S ribosomal protein S27 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 691.3107 2 687.302865 1372.59118 73792.5 0.48062 0.00033033 -0.18388 -0.00012638 0.29674 0.00020395 687.302919892984 691.31002028929 73.477 2.1355 73.477 72.563 74.698 0 985 183 8 0 0 0 4.8828E-87 6 37949 203.87 164.14 1 1.3866 1.7149 0 312630000 130970000 181660000 928 990 453 508 1483;1484;1485;1486;1487;1488 1488 1753 DLLHPSPEEEK 11 1 0 Phospho (STY) _DLLHPS(ph)PEEEK_ DLLHPS(1)PEEEK DLLHPS(110.38)PEEEK 0 0 1 0 Q5T4L4;P42677 Q5T4L4 Q5T4L4 RPS27 40S ribosomal protein S27 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 687.3038 2 687.302865 1372.59118 72582.02 0.90635 0.00062294 0.11685 8.0313E-05 1.0232 0.00070325 687.303067649698 691.310023402193 63.131 3.158 63.131 61.789 64.947 0 1814 291 10 0 0 0 1.08E-08 5 39613 110.38 79.322 1 1.8956 1.2643 0 597840000 208370000 389470000 929 990 453 508 1489;1490;1491;1492;1493 1492 1753 DLLHPSPEEEK 11 1 0 Unmodified _DLLHPSPEEEK_ 0 0 0 0 Q5T4L4;P42677 Q5T4L4 Q5T4L4 RPS27 40S ribosomal protein S27 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 651.3268 2 647.319699 1292.62485 75241.88 0.88005 0.00056967 -0.37199 -0.00024079 0.50806 0.00032888 647.319279861275 651.326593221233 79.085 1.3875 79.085 78.45 79.837 0 550 125 6 0 0 0 8.0137E-45 3 41835 167.09 129 1 1.0284 1.2772 0 98719000 47433000 51287000 930 990 453 509 1494;1495;1496 1496 DLLHPSPEEEK 11 1 0 Unmodified _DLLHPSPEEEK_ 0 0 0 0 Q5T4L4;P42677 Q5T4L4 Q5T4L4 RPS27 40S ribosomal protein S27 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 651.3284 2 647.319699 1292.62485 77301.36 1.2815 0.00082953 0.060812 3.9365E-05 1.3423 0.0008689 647.319684605624 651.326733757792 50.938 1.7125 50.938 50.356 52.069 0 453 153 5 0 0 0 2.5697E-05 1 31034 97.456 64.616 1 2.3338 1.7998 0 16205000 5343900 10861000 931 990 453 509 1497 1497 DLLLNTMSQEEK 12 1 0 Oxidation (M),Phospho (STY) _DLLLNTM(ox)S(ph)QEEK_ DLLLNTM(1)SQEEK DLLLNT(0.21)MS(0.79)QEEK DLLLNTM(46.48)SQEEK DLLLNT(-5.76)MS(5.76)QEEK 0 1 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 758.8348 2 758.833672 1515.65279 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.087 1 85.087 84.587 85.587 0 0 0 0 0.0044004 1 45910 46.481 18.082 2 932 1027 454 510 1498 1498 294 1854;2906 DLLLNTMSQEEK 12 1 0 Oxidation (M),Phospho (STY) _DLLLNTM(ox)S(ph)QEEK_ DLLLNTM(1)SQEEK DLLLNT(0.201)MS(0.799)QEEK DLLLNTM(79.47)SQEEK DLLLNT(-6)MS(6)QEEK 0 1 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 762.843 2 758.833672 1515.65279 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.189 1 85.189 84.689 85.689 0 0 0 0 2.3754E-05 1 45978 79.466 39.035 2 933 1027 454 510 1499 1499 294 1854;2906 DLLLNTMSQEEK 12 1 0 Oxidation (M),Phospho (STY) _DLLLNT(ph)M(ox)SQEEK_ DLLLNTM(1)SQEEK DLLLNT(0.638)MS(0.362)QEEK DLLLNTM(45.26)SQEEK DLLLNT(2.47)MS(-2.47)QEEK 0 1 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 758.8325 2 758.833672 1515.65279 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.781 1 87.781 87.281 88.281 0 0 0 0 0.0030629 1 56515 45.257 16.858 2 934 1027 454 510 1500 1500 294 1854;2906 DLLPSPAGPVPSK 13 1 0 Phospho (STY) _DLLPS(ph)PAGPVPSK_ DLLPS(1)PAGPVPSK DLLPS(40.98)PAGPVPS(-40.98)K 0 0 1 0 Q9UHB7 Q9UHB7 Q9UHB7 AFF4 AF4/FMR2 family member 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 683.3492 2 679.341793 1356.66903 74306.92 0.692 0.00047011 -0.12933 -8.7861E-05 0.56267 0.00038224 679.341696995492 683.348615087594 103.83 0.88799 103.83 103.33 104.22 0 329 66 6 0 0 0 0.0042106 2 59832 63.624 38.065 2 0.71707 0.90335 0 50284000 28303000 21982000 935 1228 455 511 1501;1502 1502 2502 DLLPSPAGPVPSK 13 1 0 Phospho (STY) _DLLPS(ph)PAGPVPSK_ DLLPS(0.994)PAGPVPS(0.006)K DLLPS(22.16)PAGPVPS(-22.16)K 0 0 1 0 Q9UHB7 Q9UHB7 Q9UHB7 AFF4 AF4/FMR2 family member 4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 679.3421 2 679.341793 1356.66903 73709.98 1.1524 0.00078291 -0.29921 -0.00020327 0.85324 0.00057964 679.34159463115 683.348570735271 110.12 0.97858 110.12 109.52 110.5 0 585 91 8 0 0 0 0.0049976 1 70568 55.841 26.034 2 0.86873 0.57074 0 54922000 29008000 25914000 936 1228 455 511 1503 1503 2502 DLLSDLQDISDSER 14 0 1 Phospho (STY) _DLLSDLQDIS(ph)DSER_ DLLSDLQDIS(0.834)DS(0.166)ER DLLS(-58.64)DLQDIS(7.02)DS(-7.02)ER 0 0 1 0 Q59GL4;J3KS35;E7ESP2;B4E0M9;B4E0N4;A4VCI5;Q5QPR4;J3QR29;B4E3D9;A0A0D9SEI3;Q5QPR3;B7ZVY7;A0A0D9SER5;A0A0D9SEN2;J3QR44;Q9UQ88;P21127 Q59GL4 Q59GL4 CDK11A;CDC2L1;CDK11B Cyclin-dependent kinase 11A;Cyclin-dependent kinase 11B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 848.3709 2 843.366921 1684.71929 66893.34 0.72534 0.00061172 -0.10973 -9.2539E-05 0.61561 0.00051919 843.366885763953 848.370863158812 120 0.8011 120 119.62 120.42 7.6294E-06 390 72 7 0 0 0 8.6564E-07 1 72009 90.707 75.136 3 0.68275 0.83967 0 26369000 15001000 11368000 937 330 456 512 1504 1504 520 DLLSDLQDISDSER 14 0 1 Phospho (STY) _DLLSDLQDIS(ph)DSER_ DLLS(0.001)DLQDIS(0.843)DS(0.156)ER DLLS(-27.9)DLQDIS(7.34)DS(-7.34)ER 0 0 1 0 Q59GL4;J3KS35;E7ESP2;B4E0M9;B4E0N4;A4VCI5;Q5QPR4;J3QR29;B4E3D9;A0A0D9SEI3;Q5QPR3;B7ZVY7;A0A0D9SER5;A0A0D9SEN2;J3QR44;Q9UQ88;P21127 Q59GL4 Q59GL4 CDK11A;CDC2L1;CDK11B Cyclin-dependent kinase 11A;Cyclin-dependent kinase 11B MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 843.3655 2 843.366921 1684.71929 NaN NaN NaN NaN NaN NaN NaN NaN NaN 120.4 1 120.4 119.9 120.9 -7.6294E-06 0 0 0 7.9504E-05 1 72498 54.524 26.555 3 938 330 456 512 1505 1505 520 DLLSDLQDISDSER 14 0 1 Phospho (STY) _DLLSDLQDIS(ph)DSER_ DLLSDLQDIS(0.795)DS(0.205)ER DLLS(-39.03)DLQDIS(5.88)DS(-5.88)ER 0 0 1 0 Q59GL4;J3KS35;E7ESP2;B4E0M9;B4E0N4;A4VCI5;Q5QPR4;J3QR29;B4E3D9;A0A0D9SEI3;Q5QPR3;B7ZVY7;A0A0D9SER5;A0A0D9SEN2;J3QR44;Q9UQ88;P21127 Q59GL4 Q59GL4 CDK11A;CDC2L1;CDK11B Cyclin-dependent kinase 11A;Cyclin-dependent kinase 11B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 843.3672 2 843.366921 1684.71929 67271.9 1.0046 0.00084728 -0.27887 -0.00023519 0.72578 0.0006121 843.366653268385 848.370639113643 129.27 0.67575 129.27 128.93 129.61 0 301 60 7 0 0 0 0.0015191 1 83590 67.326 51.435 3 0.36868 0.29382 0 12752000 9094100 3658300 939 330 456 512 1506 1506 520 DLLSDLQDISDSERK 15 1 1 Phospho (STY) _DLLSDLQDIS(ph)DSERK_ DLLS(0.001)DLQDIS(0.818)DS(0.181)ERK DLLS(-28.82)DLQDIS(6.56)DS(-6.56)ERK 0 0 1 1 Q59GL4;J3KS35;E7ESP2;B4E0M9;B4E0N4;A4VCI5;Q5QPR4;J3QR29;B4E3D9;A0A0D9SEI3;Q5QPR3;B7ZVY7;A0A0D9SER5;A0A0D9SEN2;J3QR44;Q9UQ88;P21127 Q59GL4 Q59GL4 CDK11A;CDC2L1;CDK11B Cyclin-dependent kinase 11A;Cyclin-dependent kinase 11B MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 907.4166 2 907.414403 1812.81425 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.59 1 112.59 112.09 113.09 0 0 0 0 0.0060561 1 66822 41.378 29.212 3 940 330 457 513 1507 1507 520 DLLSDLQDISDSERK 15 1 1 Phospho (STY) _DLLSDLQDIS(ph)DSERK_ DLLS(0.001)DLQDIS(0.894)DS(0.104)ERK DLLS(-28.05)DLQDIS(9.33)DS(-9.33)ERK 0 0 1 1 Q59GL4;J3KS35;E7ESP2;B4E0M9;B4E0N4;A4VCI5;Q5QPR4;J3QR29;B4E3D9;A0A0D9SEI3;Q5QPR3;B7ZVY7;A0A0D9SER5;A0A0D9SEN2;J3QR44;Q9UQ88;P21127 Q59GL4 Q59GL4 CDK11A;CDC2L1;CDK11B Cyclin-dependent kinase 11A;Cyclin-dependent kinase 11B MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 916.4282 2 907.414403 1812.81425 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.84 1 112.84 112.34 113.34 0 0 0 0 0.00050608 1 66992 52.008 30.015 3 941 330 457 513 1508 1508 520 DLNDRPVGPR 10 0 2 Unmodified _DLNDRPVGPR_ 0 0 0 1 B9ZVT1;Q8IXT5 B9ZVT1 B9ZVT1 RBM12B RNA-binding protein 12B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 380.2034 3 380.203633 1137.58907 106746.4 -0.18131 -6.8934E-05 0.26825 0.00010199 0.086941 3.3055E-05 380.203698872983 386.875855119807 66.015 0.1985 66.015 65.888 66.086 0 40 15 4 0 0 0 0.0060787 1 31995 71.349 48.123 1 0.91632 1.0963 0 14058000 7759000 6299100 942 733 458 514 1509 1509 DLPEHAVLK 9 1 0 Unmodified _DLPEHAVLK_ 0 0 0 0 Q96BA7;B3KX72;Q00839;B4DLR3;Q7Z4Q5 Q96BA7 Q96BA7 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 515.295 2 511.287474 1020.5604 NaN NaN NaN 0.29831 0.00015252 NaN NaN NaN NaN 85.073 0.48001 85.073 84.664 85.144 0 0 0 0 0.021822 1 45888 48.036 17.424 1 NaN NaN 0 14738000 0 14738000 943 610 459 515 1510 1510 DLPEHAVLK 9 1 0 Unmodified _DLPEHAVLK_ 0 0 0 0 Q96BA7;B3KX72;Q00839;B4DLR3;Q7Z4Q5 Q96BA7 Q96BA7 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 511.2874 2 511.287474 1020.5604 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.114 1 84.114 83.614 84.614 0 0 0 0 0.013441 1 45228 51.346 12.554 1 944 610 459 515 1511 1511 DLPEHAVLK 9 1 0 Unmodified _DLPEHAVLK_ 0 0 0 0 Q96BA7;B3KX72;Q00839;B4DLR3;Q7Z4Q5 Q96BA7 Q96BA7 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 515.2955 2 511.287474 1020.5604 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.28 1 84.28 83.78 84.78 0 0 0 0 0.016664 1 45347 49.418 18.806 1 945 610 459 515 1512 1512 DLQANVEHLVQK 12 1 0 Unmodified _DLQANVEHLVQK_ 0 0 0 0 B4E162;Q96I60;A0A0S2Z4I1;A0A024R0Y5;P08237;A0A0S2Z4A8;Q7KYX9 B4E162 B4E162 PFKM ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, muscle type MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 701.3828 2 697.37534 1392.73613 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.54 1 105.54 105.04 106.04 0 0 0 0 0.0061638 1 61247 106.29 75.727 1 946 35 460 516 1513 1513 DLQSNVEHLTEK 12 1 0 Unmodified _DLQSNVEHLTEK_ 0 0 0 0 B1APP8;O14943;Q8WTZ9;Q01813 B1APP8 B1APP8 PFKP;PFK-P ATP-dependent 6-phosphofructokinase, platelet type ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 710.8615 2 706.854438 1411.69432 NaN NaN NaN -0.82093 -0.00058028 NaN NaN NaN NaN 93.129 0.44138 93.129 92.927 93.368 0 0 0 0 5.8934E-16 3 51788 112.13 57.709 1 NaN NaN 0 11617000 0 11617000 947 522 461 517 1514;1515;1516 1516 DLQSNVEHLTEK 12 1 0 Unmodified _DLQSNVEHLTEK_ 0 0 0 0 B1APP8;O14943;Q8WTZ9;Q01813 B1APP8 B1APP8 PFKP;PFK-P ATP-dependent 6-phosphofructokinase, platelet type MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 706.8562 2 706.854438 1411.69432 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.105 1 93.105 92.605 93.605 0 0 0 0 0.00020552 1 51802 82.417 52.673 1 948 522 461 517 1517 1517 DLQSPDFTTGFHSDK 15 1 0 Phospho (STY) _DLQS(ph)PDFTTGFHSDK_ DLQS(0.999)PDFT(0.001)TGFHSDK DLQS(30.92)PDFT(-30.92)T(-38.04)GFHS(-57.04)DK 0 0 1 0 E9PDR5;B7ZLD4;E7EPI0;B7ZLE0;Q9P2D0 E9PDR5 E9PDR5 IBTK Inhibitor of Bruton tyrosine kinase ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 891.8767 2 887.869631 1773.72471 NaN NaN NaN -0.14672 -0.00013027 NaN NaN NaN NaN 91.435 0.94532 91.435 91.026 91.972 -7.6294E-06 0 0 0 1.6657E-07 2 50604 87.519 62.302 4 NaN NaN 0 17932000 0 17932000 949 723 462 518 1518;1519 1519 1194 DLQSPDFTTGFHSDK 15 1 0 Phospho (STY) _DLQS(ph)PDFTTGFHSDK_ DLQS(0.999)PDFT(0.001)TGFHSDK DLQS(29.9)PDFT(-29.9)T(-36.23)GFHS(-48.26)DK 0 0 1 0 E9PDR5;B7ZLD4;E7EPI0;B7ZLE0;Q9P2D0 E9PDR5 E9PDR5 IBTK Inhibitor of Bruton tyrosine kinase MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 887.8696 2 887.869631 1773.72471 65063.79 1.1405 0.0010126 0.08218 7.2965E-05 1.2226 0.0010856 888.370276095264 891.876867581519 88.443 1.6393 88.443 87.777 89.417 0 790 160 7 0 0 0 0.0010291 2 56911 62.055 53.671 4 0.85873 0.57998 0 26129000 14434000 11694000 950 723 462 518 1520;1521 1521 1194 DLRPVDNR 8 0 2 Unmodified _DLRPVDNR_ 0 0 0 1 B4E3M6;A8K6I4;P42285 B4E3M6 B4E3M6 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 492.7641 2 492.764697 983.514842 82783.5 0.36372 0.00017923 -0.63151 -0.00031119 -0.26779 -0.00013196 492.764083120769 502.772999707116 65.282 0.37314 65.282 65.079 65.452 0 75 26 5 0 0 0 0.014717 1 31412 72.23 34.07 1 0.72583 0.90114 0 52796000 28906000 23890000 951 480 463 519 1522 1522 DLSALMHELSNDGARR 16 0 2 Unmodified _DLSALMHELSNDGARR_ 0 0 0 1 Q7L2U6;Q6P5W1;B7Z2J1;B7Z503;D3DQW7;A8K8M7;Q9BSF8 Q7L2U6 Q7L2U6 BTBD10 BTB/POZ domain-containing protein 10 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 902.9478 2 892.939041 1783.86353 NaN NaN NaN -2.5435 -0.0022712 NaN NaN NaN NaN 124.99 0.30068 124.99 124.84 125.14 7.6294E-06 0 0 0 0.0003333 1 75731 48.44 12.929 1 NaN NaN 0 4718400 0 4718400 952 495 464 520 1523 1523 DLSDAIEQTFQR 12 0 1 Unmodified _DLSDAIEQTFQR_ 0 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B3KRS8 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 717.3536 2 711.846613 1421.67867 73560.4 1.1591 0.00082507 -0.59985 -0.000427 0.55921 0.00039807 711.845857697215 716.850614234743 117.67 0.69791 117.67 117.37 118.07 -7.6294E-06 166 64 5 0 0 0 1.0831E-08 1 75818 100.88 73.136 1 1.3181 1.0609 0 7895200 4015100 3880100 953 799 465 521 1524 1524 DLSDAIEQTFQR 12 0 1 Unmodified _DLSDAIEQTFQR_ 0 0 0 0 E9PEI0;Q69YH5;A8K8Z0;B3KRS8 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 711.8464 2 711.846613 1421.67867 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.68 1 117.68 117.18 118.18 7.6294E-06 0 0 0 0.0069606 1 75823 47.894 28.107 1 954 799 465 521 1525 1525 DLSGGLGGQEEEEEQR 16 0 1 Phospho (STY) _DLS(ph)GGLGGQEEEEEQR_ DLS(1)GGLGGQEEEEEQR DLS(45.44)GGLGGQEEEEEQR 0 0 1 0 B8ZZ93;B8ZZH7;F8WCL7;J3KQ70;B4DJ31;Q9C086 B8ZZ93 B8ZZ93 INO80B;INO80B-WBP1 INO80 complex subunit B ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 907.3709 2 906.867817 1811.72108 NaN NaN NaN -0.72985 -0.00066188 NaN NaN NaN NaN 64.499 0.13408 64.499 64.402 64.536 0 0 0 0 0.0017755 1 30666 45.438 27.521 1 NaN NaN 0 6626800 6626800 0 955 626 466 522 1526 1526 1035 DLSPEPAPDEGPR 13 0 1 Phospho (STY) _DLS(ph)PEPAPDEGPR_ DLS(1)PEPAPDEGPR DLS(106.17)PEPAPDEGPR 0 0 1 0 A0A024R9K2;Q8TBE0 A0A024R9K2 A0A024R9K2 BAHD1 Bromo adjacent homology domain-containing 1 protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 730.309 2 730.308678 1458.6028 71222.65 1.0122 0.00073923 -0.1098 -8.0187E-05 0.90242 0.00065905 730.308443769504 735.312592153692 61.151 1.0938 61.151 60.639 61.733 3.8147E-06 429 80 7 0 0 0 4.5788E-10 3 28120 106.17 94.684 1 1.174 1.4818 0 81406000 37976000 43430000 956 168 467 523 1527;1528;1529 1528 263 DLSPEPAPDEGPRR 14 0 2 Phospho (STY) _DLS(ph)PEPAPDEGPRR_ DLS(1)PEPAPDEGPRR DLS(57.8)PEPAPDEGPRR 0 0 1 1 A0A024R9K2;Q8TBE0 A0A024R9K2 A0A024R9K2 BAHD1 Bromo adjacent homology domain-containing 1 protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 539.2426 3 539.241915 1614.70391 81074.73 0.68772 0.00037085 0.228 0.00012295 0.91572 0.00049379 539.576220393772 545.914177999145 60.592 0.91122 60.592 60.087 60.998 0 213 63 5 0 0 0 0.0006906 1 27674 57.804 57.804 1 1.1333 1.3975 0 29515000 14565000 14950000 957 168 468 524 1530 1530 263 DLSPEPAPDEGPRR 14 0 2 Phospho (STY) _DLS(ph)PEPAPDEGPRR_ DLS(1)PEPAPDEGPRR DLS(48.7)PEPAPDEGPRR 0 0 1 1 A0A024R9K2;Q8TBE0 A0A024R9K2 A0A024R9K2 BAHD1 Bromo adjacent homology domain-containing 1 protein ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 818.3682 2 808.359234 1614.70391 NaN NaN NaN 0.43085 0.00034828 NaN NaN NaN NaN 60.58 0.98821 60.58 60.06 61.049 0 0 0 0 0.0041031 1 27865 48.704 35.025 1 NaN NaN 0 41073000 0 41073000 958 168 468 524 1531 1531 263 DLSPEPAPDEGPRR 14 0 2 Phospho (STY) _DLS(ph)PEPAPDEGPRR_ DLS(1)PEPAPDEGPRR DLS(78.49)PEPAPDEGPRR 0 0 1 1 A0A024R9K2;Q8TBE0 A0A024R9K2 A0A024R9K2 BAHD1 Bromo adjacent homology domain-containing 1 protein MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 808.3604 2 808.359234 1614.70391 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.465 1 60.465 59.965 60.965 0 0 0 0 1.329E-05 1 27516 78.486 59.092 1 959 168 468 524 1532 1532 263 DLSPEPAPDEGPRR 14 0 2 Phospho (STY) _DLS(ph)PEPAPDEGPRR_ DLS(1)PEPAPDEGPRR DLS(51.94)PEPAPDEGPRR 0 0 1 1 A0A024R9K2;Q8TBE0 A0A024R9K2 A0A024R9K2 BAHD1 Bromo adjacent homology domain-containing 1 protein ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 808.36 2 808.359234 1614.70391 NaN NaN NaN -0.26732 -0.00021609 NaN NaN NaN NaN 40.99 1.5844 40.99 40.449 42.033 0 0 0 0 0.0027339 1 23968 51.939 36.367 1 NaN NaN 0 42830000 42830000 0 960 168 468 524 1533 1533 263 DLTDYLMK 8 1 0 Oxidation (M) _DLTDYLM(ox)K_ DLTDYLM(1)K DLTDYLM(62.66)K 0 1 0 0 B4E335;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;V9HVZ7;Q562R1;K4EQ44;K4EP00;K4ENJ5;A0AUL6;B4E3A4;P63261;I3L3I0;I3L1U9;I3L4N8;B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;Q13707;B3KW67;A8K3K1;B4DUI8 B4E335;B4E3A4;B7Z6P1 B4E3A4 PS1TP5BP1;ACTB;ACTG1;HEL-176;ACTBL2;ACTA2;ACTG2;ACTA1;ACTC1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Beta-actin-like protein 2;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 511.751 2 507.74425 1013.47395 86102.69 -0.14012 -7.1146E-05 0.23607 0.00011986 0.095946 4.8716E-05 507.744264653102 511.751380530819 92.196 0.62866 92.196 91.679 92.308 7.6294E-06 200 55 5 0 0 0 0.024323 1 51150 62.659 49.67 1 2.9081 3.6101 0 104620000 29837000 74782000 961 683;685;711 469 525 1534 1534 172 DLTDYLMK 8 1 0 Oxidation (M) _DLTDYLM(ox)K_ DLTDYLM(1)K DLTDYLM(79.6)K 0 1 0 0 B4E335;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;V9HVZ7;Q562R1;K4EQ44;K4EP00;K4ENJ5;A0AUL6;B4E3A4;P63261;I3L3I0;I3L1U9;I3L4N8;B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;Q13707;B3KW67;A8K3K1;B4DUI8 B4E335;B4E3A4;B7Z6P1 B4E3A4 PS1TP5BP1;ACTB;ACTG1;HEL-176;ACTBL2;ACTA2;ACTG2;ACTA1;ACTC1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Beta-actin-like protein 2;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 511.7517 2 507.74425 1013.47395 86102.69 0.43165 0.00021917 0.28338 0.00014389 0.71503 0.00036305 507.744312236167 511.751430223755 92.431 0.8658 92.431 92.279 93.145 0 235 75 5 0 0 0 0.014077 1 51633 79.597 72.367 1 2.7636 3.4266 0 122020000 29147000 92876000 962 683;685;711 469 525 1535 1535 172 DLTDYLMK 8 1 0 Oxidation (M) _DLTDYLM(ox)K_ DLTDYLM(1)K DLTDYLM(57.28)K 0 1 0 0 B4E335;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;V9HVZ7;Q562R1;K4EQ44;K4EP00;K4ENJ5;A0AUL6;B4E3A4;P63261;I3L3I0;I3L1U9;I3L4N8;B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;Q13707;B3KW67;A8K3K1;B4DUI8 B4E335;B4E3A4;B7Z6P1 B4E3A4 PS1TP5BP1;ACTB;ACTG1;HEL-176;ACTBL2;ACTA2;ACTG2;ACTA1;ACTC1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Beta-actin-like protein 2;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 511.7524 2 507.74425 1013.47395 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.718 1 90.718 90.218 91.218 0 0 0 0 0.014422 1 49967 57.281 33.309 1 963 683;685;711 469 525 1536 1536 172 DLTDYLMK 8 1 0 Oxidation (M) _DLTDYLM(ox)K_ DLTDYLM(1)K DLTDYLM(66.68)K 0 1 0 0 B4E335;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;V9HVZ7;Q562R1;K4EQ44;K4EP00;K4ENJ5;A0AUL6;B4E3A4;P63261;I3L3I0;I3L1U9;I3L4N8;B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;Q13707;B3KW67;A8K3K1;B4DUI8 B4E335;B4E3A4;B7Z6P1 B4E3A4 PS1TP5BP1;ACTB;ACTG1;HEL-176;ACTBL2;ACTA2;ACTG2;ACTA1;ACTC1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Beta-actin-like protein 2;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 511.7527 2 507.74425 1013.47395 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.798 1 90.798 90.298 91.298 -7.6294E-06 0 0 0 0.015327 1 50027 66.682 47.205 1 964 683;685;711 469 525 1537 1537 172 DLTDYLMK 8 1 0 Oxidation (M) _DLTDYLM(ox)K_ DLTDYLM(1)K DLTDYLM(75.85)K 0 1 0 0 B4E335;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;V9HVZ7;Q562R1;K4EQ44;K4EP00;K4ENJ5;A0AUL6;B4E3A4;P63261;I3L3I0;I3L1U9;I3L4N8;B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;Q13707;B3KW67;A8K3K1;B4DUI8 B4E335;B4E3A4;B7Z6P1 B4E3A4 PS1TP5BP1;ACTB;ACTG1;HEL-176;ACTBL2;ACTA2;ACTG2;ACTA1;ACTC1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Beta-actin-like protein 2;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 511.7522 2 507.74425 1013.47395 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.411 1 91.411 90.911 91.911 0 0 0 0 0.010553 1 50491 75.854 47.342 1 965 683;685;711 469 525 1538 1538 172 DLTIPESSTVK 11 1 0 Phospho (STY) _DLTIPES(ph)STVK_ DLTIPES(0.333)S(0.333)T(0.333)VK DLT(-30.89)IPES(0)S(0)T(0)VK 0 0 1 0 K7EMM8;D3DUE6;D3DUE7;Q49A26;K7EPU6 K7EMM8 K7EMM8 GLYR1;N-PAC Putative oxidoreductase GLYR1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 635.3037 2 635.302333 1268.59011 75365.8 0.7138 0.00045348 -1.7227 -0.0010944 -1.0089 -0.00064093 635.301840857214 639.307670988556 88.738 1.2913 88.738 88.256 89.547 0 250 115 4 0 0 0 0.0076658 1 48489 61.435 43.626 4 2.4523 3.0271 0 23325000 7009800 16315000 966 767 470 526 1539 1539 1291;1292;2810 DLTTAGAVTQCYR 13 0 1 Unmodified _DLTTAGAVTQCYR_ 0 0 0 0 M0R0P7;M0R3D6;M0R1A7;M0R117;B4DM74;B2R4C0;Q02543;Q32XH3 M0R0P7 M0R0P7 RPL18A 60S ribosomal protein L18a ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 728.35 2 728.348465 1454.68238 NaN NaN NaN -1.5635 -0.0011388 NaN NaN NaN NaN 70.627 0.45993 70.627 70.356 70.816 0 0 0 0 0.018701 1 44503 39.917 22.481 1 NaN NaN 0 4427400 4427400 0 967 525 471 527 1540 1540 DLVLPTQALPASPALK 16 1 0 Phospho (STY) _DLVLPTQALPAS(ph)PALK_ DLVLPTQALPAS(1)PALK DLVLPT(-44.91)QALPAS(44.91)PALK 0 0 1 0 J3KSZ6;U3KQ35;H3BR06;Q15554 J3KSZ6 J3KSZ6 TERF2 Telomeric repeat-binding factor 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 857.4639 2 857.462971 1712.91139 65987.77 0.91235 0.00078231 0.16014 0.00013731 1.0725 0.00091962 857.463108740802 861.470118279547 126.64 0.8685 126.64 126.29 127.16 7.6294E-06 560 77 10 0 0 0 1.0143E-06 3 76625 79.346 79.346 2 1.0608 1.3156 0 118280000 56357000 61919000 968 870 472 528 1541;1542;1543 1542 1480 DLVLPTQALPASPALK 16 1 0 Phospho (STY) _DLVLPTQALPAS(ph)PALK_ DLVLPTQALPAS(1)PALK DLVLPT(-54.46)QALPAS(54.46)PALK 0 0 1 0 J3KSZ6;U3KQ35;H3BR06;Q15554 J3KSZ6 J3KSZ6 TERF2 Telomeric repeat-binding factor 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 861.4709 2 857.462971 1712.91139 65291.34 1.0433 0.00089462 0.19197 0.00016461 1.2353 0.0010592 857.964761719259 861.470130488617 134.69 0.17693 134.69 134.6 134.77 0 50 6 12 0 0 0 3.0145E-30 2 86952 126.63 111.76 2 1.8918 1.2648 0 140680000 50683000 89998000 969 870 472 528 1544;1545 1544 1480 DLVQPDKPASPK 12 2 0 Phospho (STY) _DLVQPDKPAS(ph)PK_ DLVQPDKPAS(1)PK DLVQPDKPAS(68)PK 0 0 1 1 G3V4R5;G3V411;H0YJA2;Q6PJT7 G3V4R5 G3V4R5 ZC3H14 Zinc finger CCCH domain-containing protein 14 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 695.8521 2 687.836875 1373.6592 73652.61 0.70852 0.00048735 0.13609 9.3607E-05 0.84461 0.00058095 687.836956022729 695.851144912089 57.265 1.0162 57.265 56.77 57.786 0 422 85 7 0 0 0 0.0032667 3 24837 67.997 47.668 1 1.1563 1.454 0 52226000 24993000 27232000 970 840 473 529 1546;1547;1548 1546 1445 DLVQPDKPASPK 12 2 0 Phospho (STY) _DLVQPDKPAS(ph)PK_ DLVQPDKPAS(1)PK DLVQPDKPAS(58.32)PK 0 0 1 1 G3V4R5;G3V411;H0YJA2;Q6PJT7 G3V4R5 G3V4R5 ZC3H14 Zinc finger CCCH domain-containing protein 14 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 695.8518 2 687.836875 1373.6592 73324.12 0.86452 0.00059465 0.45128 0.00031041 1.3158 0.00090506 687.837050469712 695.851375087738 36.522 0.76732 36.522 36.221 36.988 0 314 64 7 0 0 0 0.005831 1 20506 58.32 36.274 1 2.7458 2.1429 0 38123000 10287000 27836000 971 840 473 529 1549 1549 1445 DLVWLEEIQEEAER 14 0 1 Unmodified _DLVWLEEIQEEAER_ 0 0 0 0 Q9NQS7;B3KPD3;E9PM67 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 879.9406 2 879.930874 1757.84719 65067.3 1.0885 0.00095785 0.32646 0.00028726 1.415 0.0012451 880.43258639449 884.935613495703 133.53 0.13208 133.53 133.47 133.6 0 14 4 5 0 0 0 1.2908E-30 3 81314 138.45 120.71 1 0.94436 1.1351 0 18085000 8536900 9548500 972 1212 474 530 1550;1551;1552 1550 DLYIRPNIAQK 11 1 1 Unmodified _DLYIRPNIAQK_ 0 0 0 1 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 665.8774 2 665.877519 1329.74048 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.439 1 98.439 97.939 98.939 -7.6294E-06 0 0 0 0.00096993 1 55912 79.148 43.637 1 973 1254 475 531 1553 1553 DMDEPSPVPNVEEVTLPK 18 1 0 Oxidation (M),Phospho (STY) _DM(ox)DEPS(ph)PVPNVEEVTLPK_ DM(1)DEPSPVPNVEEVTLPK DMDEPS(0.996)PVPNVEEVT(0.004)LPK DM(53.4)DEPSPVPNVEEVTLPK DMDEPS(24.45)PVPNVEEVT(-24.45)LPK 0 1 1 0 B4DF22;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2 B4DF22 B4DF22 SMARCC2 SWI/SNF complex subunit SMARCC2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1046.4635 2 1046.46324 2090.91192 59335.28 0.77536 0.00081139 0.09802 0.00010257 0.87338 0.00091396 1046.9649908008 1050.47044826981 113.12 0.85391 113.12 112.76 113.61 0 704 79 12 0 0 0 1.456E-05 2 66964 53.403 47.91 2 0.76033 0.93975 0 416820000 246950000 169860000 974 190 476 532 1554;1555 1554 46 302 DMFQETMEAMR 11 0 1 3 Oxidation (M) _DM(ox)FQETM(ox)EAM(ox)R_ DM(1)FQETM(1)EAM(1)R DM(51.93)FQETM(51.93)EAM(51.93)R 0 3 0 0 A0A024R1N1;P35579;Q86XU5;B4E3S1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 723.782 2 718.77817 1435.54179 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.022 1 48.022 47.522 48.522 0 0 0 0 0.0019926 1 18733 51.927 37.669 1 975 49 477 533 1556 1556 5;6;7 DMSPLSETEMALGK 14 1 0 2 Oxidation (M),Phospho (STY) _DM(ox)S(ph)PLSETEM(ox)ALGK_ DM(1)SPLSETEM(1)ALGK DMS(0.999)PLS(0.001)ETEMALGK DM(60.55)SPLSETEM(60.55)ALGK DMS(30)PLS(-30)ET(-35.7)EMALGK 0 2 1 0 E7EVA0;P27816;B4DM10;A0A024R2V2;A0A024R2S1 E7EVA0 E7EVA0 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 814.838 2 810.830272 1619.64599 NaN NaN NaN NaN NaN NaN NaN NaN NaN 102.79 1 102.79 102.29 103.29 0 0 0 0 8.6174E-06 1 59281 60.55 52.245 3 976 793 478 534 1557 1557 213;214 1359 DNEEVVLSENK 11 1 0 Phospho (STY) _DNEEVVLS(ph)ENK_ DNEEVVLS(1)ENK DNEEVVLS(78.81)ENK 0 0 1 0 A0A024RD28;Q7L2Z9 A0A024RD28 A0A024RD28 C6orf139;CENPQ Centromere protein Q MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 678.2901 2 678.289954 1354.56536 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.087 1 58.087 57.587 58.587 0 0 0 0 0.00011495 1 25650 78.814 69.924 1 977 221 479 535 1558 1558 348 DNFFSLTPK 9 1 0 Phospho (STY) _DNFFSLT(ph)PK_ DNFFS(0.001)LT(0.999)PK DNFFS(-32.13)LT(32.13)PK 0 0 1 0 B7Z7S9;Q562F6 B7Z7S9 B7Z7S9 SGOL2 Shugoshin-like 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 574.7548 2 574.754822 1147.49509 79461.59 0.67051 0.00038538 0.12058 6.9303E-05 0.79109 0.00045468 574.754737930377 578.761766665793 116.96 1.1713 116.96 116.4 117.57 0 540 103 7 0 0 0 1.8671E-19 3 70176 147.91 127.7 2 0.64605 0.80653 0 68265000 40099000 28166000 978 713 480 536 1559;1560;1561 1560 2803 DNFFSLTPK 9 1 0 Phospho (STY) _DNFFSLT(ph)PK_ DNFFS(0.003)LT(0.997)PK DNFFS(-25.93)LT(25.93)PK 0 0 1 0 B7Z7S9;Q562F6 B7Z7S9 B7Z7S9 SGOL2 Shugoshin-like 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 574.7551 2 574.754822 1147.49509 80448.93 0.63266 0.00036362 0.24852 0.00014284 0.88117 0.00050646 574.754896450537 578.761974397237 123.94 1.4901 123.94 123.25 124.74 7.6294E-06 765 142 8 0 0 0 0.00061683 2 80283 108.35 97.136 2 1.2685 0.82909 0 47322000 21847000 25474000 979 713 480 536 1562;1563 1563 2803 DNGDLVLSSPSNVTLPQVK 19 1 0 Phospho (STY) _DNGDLVLS(ph)SPSNVTLPQVK_ DNGDLVLS(0.444)S(0.444)PS(0.091)NVT(0.02)LPQVK DNGDLVLS(0)S(0)PS(-6.87)NVT(-13.44)LPQVK 0 0 1 0 F5ATB8;E5KQF5;H6V745;F1D8N4;B6ZGU6;E5KQF6;P04150 F5ATB8 F5ATB8 NR3C1 Glucocorticoid receptor MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1036.0145 2 1032.00646 2061.99837 62891.39 0.67669 0.00069835 0.21929 0.00022631 0.89598 0.00092466 1032.00707276838 1036.0135918451 118.13 0.33531 118.13 117.97 118.3 0 78 28 4 0 0 0 0.00045434 1 70801 40.066 40.066 4 0.99815 1.1839 0 9056000 4188400 4867600 980 698 481 537 1564 1564 1151;1152 DNIQGITK 8 1 0 Unmodified _DNIQGITK_ 0 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 448.7502 2 444.742899 887.471246 90658.92 0.13509 6.0082E-05 0.072187 3.2105E-05 0.20728 9.2186E-05 444.742858906596 448.749916587477 55.907 1.8093 55.907 55.004 56.813 0 717 146 7 0 0 0 0.013776 4 23710 113.71 72.204 1 0.70901 0.87838 0 141900000 82180000 59716000 981 528 482 538 1565;1566;1567;1568 1565 DNLAEDIMR 9 0 1 Oxidation (M) _DNLAEDIM(ox)R_ DNLAEDIM(1)R DNLAEDIM(57.71)R 0 1 0 0 V9HWE1;Q53HU8;P08670;B3KRK8;B0YJC4 V9HWE1 V9HWE1 HEL113;VIM Vimentin ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 551.758 2 546.753138 1091.49172 NaN NaN NaN 0.11435 6.2522E-05 NaN NaN NaN NaN 57.775 0.16327 57.775 57.693 57.856 0 0 0 0 0.027068 1 35587 57.708 41.235 1 NaN NaN 0 2224900 0 2224900 982 960 483 539 1569 1569 263 DNLTAVEK 8 1 0 Unmodified _DNLTAVEK_ 0 0 0 0 B4DVG9;E7ETZ8;B9EJB6;Q49MG5 B4DVG9 B4DVG9 MAP9 Microtubule-associated protein 9 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 445.2347 2 445.234907 888.455261 90724.11 0.24549 0.0001093 0.15043 6.6978E-05 0.39592 0.00017628 445.234862610328 449.242022300701 60.543 0.80024 60.543 60.06 60.861 0 201 56 6 0 0 0 0.032145 1 27436 64.757 0 1 0.68785 0.86478 0 53329000 32636000 20694000 983 667 484 540 1570 1570 DNNLLGR 7 0 1 Unmodified _DNNLLGR_ 0 0 0 0 Q53FC7;B3KSM6;B2R6X5;P17066;B4DXY3;B4DFN9;B4DI39;B4DWK5;Q53FA3;B2RCQ9;A8K5I0;A0A0G2JIW1;B4DI54;Q59EJ3;P34931;P0DMV9;P0DMV8;B4E1T6;B4DNX1;V9GZ37;B3KTT5;B4DVU9;B4E1S9;B4E388;B4DNT8;B4DHP5 Q53FC7 Q53FC7 HSPA6;HEL-S-103;HSPA1L;HSPA1B;HSPA1A Heat shock 70 kDa protein 6;Heat shock 70 kDa protein 1-like;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 401.2143 2 401.214309 800.414065 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.634 1 62.634 62.134 63.134 0 0 0 0 0.033793 1 29299 69.093 45.121 1 984 534 485 541 1571 1571 DNPSPEPQLDDIK 13 1 0 Phospho (STY) _DNPS(ph)PEPQLDDIK_ DNPS(1)PEPQLDDIK DNPS(64.44)PEPQLDDIK 0 0 1 0 Q96JC9 Q96JC9 Q96JC9 EAF1 ELL-associated factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 778.3433 2 774.334893 1546.65523 69986.41 0.81854 0.00063382 0.90872 0.00070365 1.7273 0.0013375 774.336577400033 778.342056950171 81.012 1.2608 81.012 80.422 81.682 0 458 116 7 0 0 0 0.0039027 2 42778 64.439 46.127 1 0.93563 1.1662 0 72141000 39544000 32597000 985 1179 486 542 1572;1573 1572 2314 DNPSPEPQLDDIKR 14 1 1 Phospho (STY) _DNPS(ph)PEPQLDDIKR_ DNPS(1)PEPQLDDIKR DNPS(45.01)PEPQLDDIKR 0 0 1 1 Q96JC9 Q96JC9 Q96JC9 EAF1 ELL-associated factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 568.5927 3 568.592725 1702.75634 79486.68 0.65523 0.00037256 0.50303 0.00028602 1.1583 0.00065858 568.592665287145 574.600966996365 65.347 1.2041 65.347 64.436 65.64 0 434 109 7 0 0 0 0.0007878 1 40703 45.014 33.322 1 1.2293 0.94491 0 30483000 13887000 16596000 986 1179 487 543 1574 1574 2314 DNPSPEPQLDDIKR 14 1 1 Phospho (STY) _DNPS(ph)PEPQLDDIKR_ DNPS(1)PEPQLDDIKR DNPS(74.73)PEPQLDDIKR 0 0 1 1 Q96JC9 Q96JC9 Q96JC9 EAF1 ELL-associated factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 568.9276 3 568.592725 1702.75634 79486.65 0.6915 0.00039318 0.11185 6.3596E-05 0.80335 0.00045678 568.592721009886 574.600309985107 66.16 1.104 66.16 65.538 66.642 0 491 99 7 0 0 0 4.3918E-05 3 41220 74.732 55.408 1 1.0079 0.77673 0 37056000 15955000 21101000 987 1179 487 543 1575;1576;1577 1576 2314 DNPSPEPQLDDIKR 14 1 1 Phospho (STY) _DNPS(ph)PEPQLDDIKR_ DNPS(1)PEPQLDDIKR DNPS(46.89)PEPQLDDIKR 0 0 1 1 Q96JC9 Q96JC9 Q96JC9 EAF1 ELL-associated factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 852.8876 2 852.385449 1702.75634 65367.61 1.1428 0.0009741 0.39405 0.00033588 1.5368 0.00131 852.385754145339 861.396974492785 66.182 0.97467 66.182 65.611 66.585 0 410 88 7 0 0 0 0.0012806 1 41208 46.892 29.866 1 1.0312 0.79355 0 32386000 15650000 16735000 988 1179 487 543 1578 1578 2314 DNQLSEVANK 10 1 0 Unmodified _DNQLSEVANK_ 0 0 0 0 B2RAU8;A0A0A0MRM9;Q14978;S4R402;S4R341;S4R349 B2RAU8 B2RAU8 NOLC1 Nucleolar and coiled-body phosphoprotein 1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 563.2854 2 559.277835 1116.54112 NaN NaN NaN -0.036348 -2.0329E-05 NaN NaN NaN NaN 54.694 0.24026 54.694 54.636 54.877 0 0 0 0 0.00025941 1 23226 80.688 61.594 1 NaN NaN 0 2643000 0 2643000 989 287 488 544 1579 1579 DNQLSEVANK 10 1 0 Unmodified _DNQLSEVANK_ 0 0 0 0 B2RAU8;A0A0A0MRM9;Q14978;S4R402;S4R341;S4R349 B2RAU8 B2RAU8 NOLC1 Nucleolar and coiled-body phosphoprotein 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 559.278 2 559.277835 1116.54112 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.55 1 54.55 54.05 55.05 0 0 0 0 0.008242 1 23115 54.982 30.827 1 990 287 488 544 1580 1580 DNSIAVVCGNNSFDIER 17 0 1 Unmodified _DNSIAVVCGNNSFDIER_ 0 0 0 0 A0A126LAW6 A0A126LAW6 A0A126LAW6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 640.6332 3 637.29514 1908.86359 76006.66 0.81718 0.00052079 1.7825 0.001136 2.5997 0.0016568 637.296392312626 640.632363494745 64.115 0.93222 64.115 63.349 64.281 -7.6294E-06 340 69 10 0 0 0 0.01081 1 30497 24.481 14.142 1 1.7736 2.2445 0 358610000 129120000 229490000 991 372 489 545 1581 1581 DNSQPVHLESTIAHEIYQK 19 1 0 Unmodified _DNSQPVHLESTIAHEIYQK_ 0 0 0 0 B3KWI2;Q8IZT6 B3KWI2 B3KWI2 ASPM Abnormal spindle-like microcephaly-associated protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 737.3703 3 737.034313 2208.08111 69828.67 0.83562 0.00061588 -0.028607 -2.1084E-05 0.80701 0.0005948 737.034139230331 740.039867052252 145.88 0.1757 145.88 145.79 145.97 0 42 10 6 0 0 0 0.027603 1 84159 17.595 13.718 1 0.77837 0.91241 0 3377900 1817900 1560000 992 606 490 546 1582 1582 DNTFFRESPVGR 12 0 2 Phospho (STY) _DNTFFRES(ph)PVGR_ DNT(0.014)FFRES(0.986)PVGR DNT(-18.41)FFRES(18.41)PVGR 0 0 1 1 F8WF16;B7Z615;B7Z8L1;F8W6A0;B7Z8M9;F8W0Q9;B7Z695;Q8NEY8;F8VPY7;F8VWU8 F8WF16 F8WF16 PPHLN1 Periphilin-1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 502.2241 3 502.224195 1503.65076 91287.53 0.22651 0.00011376 0.14493 7.2787E-05 0.37144 0.00018655 502.224144088508 508.896506320009 84.534 0.56479 84.534 84.192 84.756 0 90 48 4 0 0 0 0.0070451 1 45573 40.237 40.237 2 0.72801 0.87871 0 16515000 7272100 9243000 993 710 491 547 1583 1583 1178 DNTFFRESPVGR 12 0 2 Phospho (STY) _DNTFFRES(ph)PVGR_ DNTFFRES(1)PVGR DNT(-57.4)FFRES(57.4)PVGR 0 0 1 1 F8WF16;B7Z615;B7Z8L1;F8W6A0;B7Z8M9;F8W0Q9;B7Z695;Q8NEY8;F8VPY7;F8VWU8 F8WF16 F8WF16 PPHLN1 Periphilin-1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 762.8426 2 752.832655 1503.65076 68759.2 1.1556 0.00086998 0.15063 0.0001134 1.3062 0.00098338 752.832635932785 762.841121917378 77.947 1.5038 77.947 77.258 78.762 0 817 140 8 0 0 0 1.377E-09 1 49764 105.17 75.19 2 0.96128 0.83644 0 100210000 51448000 48762000 994 710 491 547 1584 1584 1178 DNTFFRESPVGR 12 0 2 Phospho (STY) _DNTFFRES(ph)PVGR_ DNT(0.061)FFRES(0.939)PVGR DNT(-11.84)FFRES(11.84)PVGR 0 0 1 1 F8WF16;B7Z615;B7Z8L1;F8W6A0;B7Z8M9;F8W0Q9;B7Z695;Q8NEY8;F8VPY7;F8VWU8 F8WF16 F8WF16 PPHLN1 Periphilin-1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 502.2247 3 502.224195 1503.65076 85230.47 0.70983 0.00035649 -0.10006 -5.0252E-05 0.60977 0.00030624 502.224147531717 508.896278298828 77.922 1.3664 77.922 77.373 78.74 0 764 127 9 0 0 0 0.0030248 2 50023 55.975 50.252 2 0.93417 0.81174 0 76110000 38581000 37529000 995 710 491 547 1585;1586 1586 1178 DNTSVYHISGK 11 1 0 Unmodified _DNTSVYHISGK_ 0 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JVD8;C9J578;C9J9E4 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 614.8063 2 610.798934 1219.58332 78556.55 0.37281 0.00022771 0.27331 0.00016694 0.64612 0.00039465 610.79904887958 614.806338233758 69.306 0.57806 69.306 69.045 69.623 0 138 56 4 0 0 0 0.02191 1 34508 64.439 45.832 1 1.0675 1.3064 0 19905000 10527000 9377800 996 1220 492 548 1587 1587 DNTSVYHISGK 11 1 0 Unmodified _DNTSVYHISGK_ 0 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JVD8;C9J578;C9J9E4 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 610.7993 2 610.798934 1219.58332 78556.58 0.4288 0.00026191 0.63427 0.00038741 1.0631 0.00064932 610.799102020298 614.806467794919 71.041 1.346 71.041 70.562 71.909 0 346 127 4 0 0 0 3.18E-10 3 35528 125.54 67.609 1 1.0324 1.3106 0 40329000 18291000 22038000 997 1220 492 548 1588;1589;1590 1589 DNTSVYHISGK 11 1 0 Unmodified _DNTSVYHISGK_ 0 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JVD8;C9J578;C9J9E4 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 611.3008 2 610.798934 1219.58332 NaN NaN NaN 0.15437 9.4286E-05 NaN NaN NaN NaN 70.214 0.99516 70.214 69.623 70.618 0 0 0 0 1.7404E-06 1 34773 94.409 51.545 1 NaN NaN 0 15091000 15091000 0 998 1220 492 548 1591 1591 DNTSVYHISGK 11 1 0 Unmodified _DNTSVYHISGK_ 0 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JVD8;C9J578;C9J9E4 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 614.8063 2 610.798934 1219.58332 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.081 1 70.081 69.581 70.581 0 0 0 0 0.0057684 1 34987 96.171 57.622 1 999 1220 492 548 1592 1592 DNWEDEPQEPQEPNK 15 1 0 Unmodified _DNWEDEPQEPQEPNK_ 0 0 0 0 E9PS41;Q6RFH5 E9PS41 E9PS41 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 932.402 2 927.892477 1853.7704 64748.91 0.68406 0.00063474 -0.084966 -7.8839E-05 0.5991 0.0005559 928.394144957421 931.899144829139 63.17 0.66326 63.17 62.816 63.48 0 146 57 4 0 0 0 0.00469 2 29753 44.616 38.375 1 0.85238 1.0146 0 12022000 6258600 5763800 1000 816 493 549 1593;1594 1594 DNWEDEPQEPQEPNK 15 1 0 Unmodified _DNWEDEPQEPQEPNK_ 0 0 0 0 E9PS41;Q6RFH5 E9PS41 E9PS41 WDR74 WD repeat-containing protein 74 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 927.8933 2 927.892477 1853.7704 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.903 1 62.903 62.403 63.403 0 0 0 0 0.017404 1 29500 38.021 31.44 1 1001 816 493 549 1595 1595 DNWEDEPQEPQEPNK 15 1 0 Unmodified _DNWEDEPQEPQEPNK_ 0 0 0 0 E9PS41;Q6RFH5 E9PS41 E9PS41 WDR74 WD repeat-containing protein 74 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 931.9004 2 927.892477 1853.7704 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.93 1 62.93 62.43 63.43 0 0 0 0 0.013981 1 29521 39.561 31.97 1 1002 816 493 549 1596 1596 DNYADLSDTELTTLLR 16 0 1 Phospho (STY) _DNYADLS(ph)DTELTTLLR_ DNY(0.005)ADLS(0.542)DT(0.452)ELT(0.002)TLLR DNY(-20.79)ADLS(0.79)DT(-0.79)ELT(-24.63)T(-31.92)LLR 0 0 1 0 P50402;Q5HY57;F8WEQ1 P50402 P50402 EMD Emerin ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 960.434 2 960.435335 1918.85612 NaN NaN NaN -2.5673 -0.0024657 NaN NaN NaN NaN 133.39 0.19029 133.39 133.32 133.51 0 0 0 0 1.7085E-06 1 81250 61.265 46.703 5 NaN NaN 0 5988300 5988300 0 1003 1002 494 550 1597 1597 1820 DPAQPMSPGEATQSGAR 17 0 1 Oxidation (M),Phospho (STY) _DPAQPM(ox)S(ph)PGEATQSGAR_ DPAQPM(1)SPGEATQSGAR DPAQPMS(1)PGEATQSGAR DPAQPM(88.99)SPGEATQSGAR DPAQPMS(39.36)PGEAT(-39.36)QS(-48.76)GAR 0 1 1 0 Q9BQG0;B4DZZ1;B4DWP5 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 903.3745 2 898.369473 1794.72439 63983.24 0.89237 0.00080168 -0.091398 -8.2109E-05 0.80097 0.00071957 898.369823411883 903.373736061068 35.345 1.7242 35.345 34.667 36.391 0 995 160 9 0 0 0 6.8621E-10 3 11863 88.992 82.829 3 0.97753 1.2342 0 96972000 49301000 47671000 1004 1192 495 551 1598;1599;1600 1600 331 2357 DPAQPMSPGEATQSGARPADR 21 0 2 Oxidation (M),Phospho (STY) _DPAQPM(ox)S(ph)PGEATQSGARPADR_ DPAQPM(1)SPGEATQSGARPADR DPAQPMS(0.719)PGEAT(0.14)QS(0.14)GARPADR DPAQPM(58.95)SPGEATQSGARPADR DPAQPMS(7.1)PGEAT(-7.1)QS(-7.1)GARPADR 0 1 1 1 Q9BQG0;B4DZZ1;B4DWP5 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 745.9894 3 745.654718 2233.94232 68820.65 0.9256 0.00069018 0.0093955 7.0058E-06 0.935 0.00069719 745.988867432958 752.32677462988 17.665 0.51439 17.665 17.451 17.966 0 106 20 10 0 0 0 3.6093E-09 1 4852 58.952 35.269 3 1.1624 1.0049 0 26955000 13028000 13927000 1005 1192 496 552 1601 1601 331 2357 DPGGITAGSTDEPPMLTK 18 1 0 Oxidation (M),Phospho (STY) _DPGGITAGS(ph)TDEPPM(ox)LTK_ DPGGITAGSTDEPPM(1)LTK DPGGIT(0.011)AGS(0.461)T(0.461)DEPPMLT(0.067)K DPGGITAGSTDEPPM(45)LTK DPGGIT(-16.37)AGS(0)T(0)DEPPMLT(-8.41)K 0 1 1 0 I3L1Q2;Q8WUZ0 I3L1Q2 I3L1Q2 BCL7C B-cell CLL/lymphoma 7 protein family member C ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 942.4135 2 941.910639 1881.80672 NaN NaN NaN -0.088363 -8.323E-05 NaN NaN NaN NaN 82.935 0.12654 82.935 82.884 83.01 -7.6294E-06 0 0 0 0.00074738 1 44402 44.998 32.835 4 NaN NaN 0 8179800 8179800 0 1006 885 497 553 1602 1602 242 1496;2837 DPGGITAGSTDEPPMLTK 18 1 0 Oxidation (M),Phospho (STY) _DPGGITAGS(ph)TDEPPM(ox)LTK_ DPGGITAGSTDEPPM(1)LTK DPGGIT(0.001)AGS(0.706)T(0.244)DEPPMLT(0.05)K DPGGITAGSTDEPPM(55.85)LTK DPGGIT(-30.41)AGS(4.62)T(-4.62)DEPPMLT(-11.54)K 0 1 1 0 I3L1Q2;Q8WUZ0 I3L1Q2 I3L1Q2 BCL7C B-cell CLL/lymphoma 7 protein family member C ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 945.9185 2 941.910639 1881.80672 NaN NaN NaN 0.45804 0.00043143 NaN NaN NaN NaN 84.03 0.28616 84.03 83.805 84.091 0 0 0 0 1.0981E-05 2 45091 55.851 44.16 4 NaN NaN 0 5825600 0 5825600 1007 885 497 553 1603;1604 1603 242 1496;2837 DPGGITAGSTDEPPMLTK 18 1 0 Oxidation (M),Phospho (STY) _DPGGITAGST(ph)DEPPM(ox)LTK_ DPGGITAGSTDEPPM(1)LTK DPGGIT(0.002)AGS(0.125)T(0.851)DEPPMLT(0.022)K DPGGITAGSTDEPPM(51.15)LTK DPGGIT(-26.09)AGS(-8.33)T(8.33)DEPPMLT(-15.82)K 0 1 1 0 I3L1Q2;Q8WUZ0 I3L1Q2 I3L1Q2 BCL7C B-cell CLL/lymphoma 7 protein family member C MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 941.9106 2 941.910639 1881.80672 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.588 1 82.588 82.088 83.088 0 0 0 0 0.00075611 1 44141 51.147 32.879 4 1008 885 497 553 1605 1605 242 1496;2837 DPGGITAGSTDEPPMLTK 18 1 0 Oxidation (M),Phospho (STY) _DPGGITAGS(ph)TDEPPM(ox)LTK_ DPGGITAGSTDEPPM(1)LTK DPGGIT(0.001)AGS(0.496)T(0.496)DEPPMLT(0.007)K DPGGITAGSTDEPPM(69.33)LTK DPGGIT(-27.64)AGS(0)T(0)DEPPMLT(-18.3)K 0 1 1 0 I3L1Q2;Q8WUZ0 I3L1Q2 I3L1Q2 BCL7C B-cell CLL/lymphoma 7 protein family member C MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 945.9186 2 941.910639 1881.80672 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.98 1 82.98 82.48 83.48 0 0 0 0 2.0789E-06 1 44421 69.331 52.932 4 1009 885 497 553 1606 1606 242 1496;2837 DPIFQPPSPPK 11 1 0 Phospho (STY) _DPIFQPPS(ph)PPK_ DPIFQPPS(1)PPK DPIFQPPS(116.24)PPK 0 0 1 0 Q05932 Q05932 Q05932 FPGS Folylpolyglutamate synthase, mitochondrial MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 651.8107 2 651.810129 1301.6057 76245.81 1.0264 0.000669 0.12065 7.8643E-05 1.147 0.00074764 651.810048823621 655.817291177992 103.59 1.0068 103.59 103.04 104.05 -7.6294E-06 240 71 5 0 0 0 4.1384E-09 3 59776 116.24 100.7 1 1.5997 1.9065 0 12431000 4474300 7956500 1010 1037 498 554 1607;1608;1609 1609 1929 DPIFQPPSPPK 11 1 0 Phospho (STY) _DPIFQPPS(ph)PPK_ DPIFQPPS(1)PPK DPIFQPPS(88.02)PPK 0 0 1 0 Q05932 Q05932 Q05932 FPGS Folylpolyglutamate synthase, mitochondrial MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 655.8181 2 651.810129 1301.6057 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.86 1 103.86 103.36 104.36 0 0 0 0 0.0012075 1 60043 88.021 57.766 1 1011 1037 498 554 1610 1610 1929 DPNFVHSGHGGAVAGK 16 1 0 Unmodified _DPNFVHSGHGGAVAGK_ 0 0 0 0 M0R3E2;K7EIY8;Q6PI98 M0R3E2 M0R3E2 INO80C INO80 complex subunit C MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 519.9269 3 517.255056 1548.74334 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.978 1 80.978 80.478 81.478 0 0 0 0 0.022722 1 43001 37.913 23.9 1 1012 900 499 555 1611 1611 DPNFVHSGHGGAVAGK 16 1 0 Unmodified _DPNFVHSGHGGAVAGK_ 0 0 0 0 M0R3E2;K7EIY8;Q6PI98 M0R3E2 M0R3E2 INO80C INO80 complex subunit C MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 517.2551 3 517.255056 1548.74334 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.167 1 81.167 80.667 81.667 0 0 0 0 0.0099233 1 43148 33.547 19.83 1 1013 900 499 555 1612 1612 DPNSATATAPPSPLK 15 1 0 Phospho (STY) _DPNSATATAPPS(ph)PLK_ DPNSATAT(0.001)APPS(0.999)PLK DPNS(-77.78)AT(-46.67)AT(-29.08)APPS(29.08)PLK 0 0 1 0 A0A024QZU8;Q92766;C9JPJ6;C9JU34 A0A024QZU8 A0A024QZU8 RREB1 Ras-responsive element-binding protein 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 773.8599 2 773.861078 1545.7076 NaN NaN NaN -1.4017 -0.0010847 NaN NaN NaN NaN 68.242 0.19205 68.242 68.164 68.356 -7.6294E-06 0 0 0 3.8524E-12 1 33782 100.24 82.372 4 NaN NaN 0 9267500 9267500 0 1014 19 500 556 1613 1613 24 DPNSATATAPPSPLK 15 1 0 Phospho (STY) _DPNSATATAPPS(ph)PLK_ DPNSATAT(0.001)APPS(0.999)PLK DPNS(-64.89)AT(-40.01)AT(-30.99)APPS(30.99)PLK 0 0 1 0 A0A024QZU8;Q92766;C9JPJ6;C9JU34 A0A024QZU8 A0A024QZU8 RREB1 Ras-responsive element-binding protein 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 773.8765 2 773.861078 1545.7076 NaN NaN NaN -1.0994 -0.00085077 NaN NaN NaN NaN 68.592 0.59917 68.592 68.295 68.894 0 0 0 0 9.4902E-05 1 34180 75.535 56.264 4 NaN NaN 0 15355000 15355000 0 1015 19 500 556 1614 1614 24 DPNSPLYSVK 10 1 0 Phospho (STY) _DPNS(ph)PLYSVK_ DPNS(0.982)PLY(0.011)S(0.007)VK DPNS(19.49)PLY(-19.49)S(-21.72)VK 0 0 1 0 I3L0H8;Q2NL95;Q9HBZ9;Q7Z4W5;Q53G16;F6QDS0;A0A0U4B4U6;H3BQK0;Q9NUU7;Q9UMR2;B4DS24;H3BTB3;H3BMQ5;H3BN59 I3L0H8 I3L0H8 DDX19A;DDX19B ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 604.2776 2 600.270836 1198.52712 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.791 1 71.791 71.291 72.291 7.6294E-06 0 0 0 0.0069234 1 36145 51.252 27.03 3 1016 370 501 557 1615 1615 591 DPSFRPTAK 9 1 1 Unmodified _DPSFRPTAK_ 0 0 0 1 Q96SR7;Q9NWX4;Q8NBY1;Q499L9;B4E0Y9;Q9P289 Q96SR7 Q96SR7 STK26;MST4 Serine/threonine-protein kinase 26 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 509.7694 2 509.769448 1017.52434 85639.84 0.15477 7.8897E-05 -0.29882 -0.00015233 -0.14405 -7.3433E-05 509.769345363129 518.780524839436 66.724 0.22919 66.724 66.626 66.856 0 48 15 4 0 0 0 0.0011818 1 32610 80.787 51.889 1 1.795 2.1044 0 37951000 13337000 24614000 1017 678 502 558 1616 1616 DPSGASNPSADSPLHR 16 0 1 Phospho (STY) _DPSGASNPSADS(ph)PLHR_ DPSGASNPS(0.002)ADS(0.998)PLHR DPS(-44.59)GAS(-39.58)NPS(-27.12)ADS(27.12)PLHR 0 0 1 0 B4E257;P55317 B4E257 B4E257 FOXA1 Hepatocyte nuclear factor 3-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 566.5767 3 563.240574 1686.69989 81870.43 0.77062 0.00043404 -0.25216 -0.00014203 0.51846 0.00029202 563.240232511809 566.576480473623 48.836 0.66272 48.836 48.423 49.086 0 151 44 6 0 0 0 5.5647E-05 1 19294 56.719 46.084 4 0.83424 0.91407 0 6732600 3744300 2988300 1018 682 503 559 1617 1617 1126 DPSGASNPSADSPLHR 16 0 1 Phospho (STY) _DPSGASNPSADS(ph)PLHR_ DPSGASNPS(0.005)ADS(0.995)PLHR DPS(-37.13)GAS(-37.54)NPS(-23.3)ADS(23.3)PLHR 0 0 1 0 B4E257;P55317 B4E257 B4E257 FOXA1 Hepatocyte nuclear factor 3-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 566.5768 3 563.240574 1686.69989 82871.87 0.60623 0.00034145 0.069074 3.8905E-05 0.6753 0.00038036 563.240529810681 566.576761265043 30.101 0.44263 30.101 29.911 30.354 -1.9073E-06 109 29 5 0 0 0 0.00011795 1 15634 49.188 45.086 4 1.8371 1.4763 0 8094900 3168800 4926100 1019 682 503 559 1618 1618 1126 DPSLPVASSSSSSSK 15 1 0 Phospho (STY) _DPSLPVAS(ph)SSSSSSK_ DPSLPVAS(0.143)S(0.143)S(0.143)S(0.143)S(0.143)S(0.143)S(0.143)K DPS(-34.66)LPVAS(0)S(0)S(0)S(0)S(0)S(0)S(0)K 0 0 1 0 D2CPI8 D2CPI8 D2CPI8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 758.3325 2 758.33235 1514.65015 70005.05 0.73388 0.00055653 1.5876 0.0012039 2.3214 0.0017604 758.332375054962 763.344299805507 65.58 0.65322 65.58 65.219 65.872 0 116 49 5 0 0 0 0.0013089 1 31474 48.284 20.001 8 0.65238 0.79531 0 18558000 8395300 10162000 1020 763 504 560 1619 1619 1282;1283;1284;1285;1286;1287;1288 DQEALEAVK 9 1 0 Unmodified _DQEALEAVK_ 0 0 0 0 B7ZLZ7;A0A024R158;O95347;Q05BV1;A8K984;Q2KQ72;B3KMB1 B7ZLZ7 B7ZLZ7 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 505.7651 2 501.758746 1001.50294 NaN NaN NaN NaN NaN NaN NaN NaN NaN 61.186 1 61.186 60.686 61.686 0 0 0 0 0.02976 1 28127 43.185 15.302 1 1021 39 505 561 1620 1620 DQEEALSLDR 10 0 1 Phospho (STY) _DQEEALS(ph)LDR_ DQEEALS(1)LDR DQEEALS(99.5)LDR 0 0 1 0 Q5T5X7 Q5T5X7 Q5T5X7 BEND3 BEN domain-containing protein 3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 633.2687 2 628.263739 1254.51293 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.455 1 68.455 67.955 68.955 0 0 0 0 0.00093621 1 33939 99.5 48.408 1 1022 1104 506 562 1621 1621 2091 DQFLDTLQAHGHDVNSFVR 19 0 1 Unmodified _DQFLDTLQAHGHDVNSFVR_ 0 0 0 0 Q15021;B4E0B7;B3KMS0;B3KY03;E7EN77;Q6ZV00 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 734.0266 3 733.690769 2198.05048 70354.95 0.82595 0.00060599 -0.1472 -0.000108 0.67875 0.00049799 734.025053614804 737.026892079476 146.14 0.29539 146.14 146.01 146.3 0 130 22 10 0 0 0 0.0044678 2 84272 25.544 10.123 1 0.84865 0.95006 0 9855500 4840900 5014700 1023 1067 507 563 1622;1623 1623 DQGTYEDYVEGLR 13 0 1 Unmodified _DQGTYEDYVEGLR_ 0 0 0 0 H0YI43;F8VZU9;G3V1Y7;Q6IBG5;F8VPF3;F8W1R7;J3KND3;G8JLA2;G3V1V0;F8W180;B7Z6Z4;P60660 H0YI43 H0YI43 MYL6 Myosin light polypeptide 6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 772.8481 2 772.84681 1543.67907 73476.98 0.95273 0.00073631 1.2117 0.00093645 2.1644 0.0016728 773.3504251251 777.851609054561 97.754 0.29282 97.754 97.626 97.919 0 46 23 4 0 0 0 0.007916 1 55454 68.44 61.907 1 1.7623 1.9785 0 10256000 5850500 4405700 1024 712 508 564 1624 1624 DQIVDLTVGNNK 12 1 0 Unmodified _DQIVDLTVGNNK_ 0 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 658.3478 2 658.346249 1314.67794 NaN NaN NaN 0.40612 0.00026736 NaN NaN NaN NaN 89.376 0.21738 89.376 89.237 89.454 0 0 0 0 0.0017211 1 49005 77.379 51.441 1 NaN NaN 0 11664000 11664000 0 + 1025 757 509 565 1625 1625 DQIVDLTVGNNK 12 1 0 Unmodified _DQIVDLTVGNNK_ 0 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 658.3471 2 658.346249 1314.67794 NaN NaN NaN -0.10711 -7.0514E-05 NaN NaN NaN NaN 90.55 0.74364 90.55 89.853 90.597 0 0 0 0 8.4854E-24 1 49591 122.51 80.632 1 NaN NaN 0 83410000 83410000 0 + 1026 757 509 565 1626 1626 DQIVDLTVGNNK 12 1 0 Unmodified _DQIVDLTVGNNK_ 0 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 658.3468 2 658.346249 1314.67794 NaN NaN NaN 0.11492 7.5658E-05 NaN NaN NaN NaN 91.086 1.4137 91.086 90.287 91.701 -7.6294E-06 0 0 0 5.7909E-44 1 50151 139.43 96.835 1 NaN NaN 0 214590000 214590000 0 + 1027 757 509 565 1627 1627 DQIVDLTVGNNK 12 1 0 Unmodified _DQIVDLTVGNNK_ 0 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 658.3488 2 658.346249 1314.67794 NaN NaN NaN -0.051889 -3.4161E-05 NaN NaN NaN NaN 85.734 1.6403 85.734 84.998 86.639 0 0 0 0 0.0019553 3 55479 76.332 44.838 1 NaN NaN 0 191910000 191910000 0 + 1028 757 509 565 1628;1629;1630 1629 DQIYDIFQK 9 1 0 Unmodified _DQIYDIFQK_ 0 0 0 0 B4DNH2;J3KSZ0;J3KT12;A8K7F6;A8K088;P60842;J3KTN0;B4DKP9;J3QS69;Q59F68;J3KTB5;J3QL43;J3QR64 B4DNH2 B4DNH2 EIF4A1 Eukaryotic initiation factor 4A-I MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 589.3022 2 585.295496 1168.57644 80781.38 0.66139 0.00038711 -0.24623 -0.00014412 0.41516 0.00024299 585.295246549093 589.302388987747 109.96 0.89164 109.96 109.51 110.41 7.6294E-06 185 70 4 0 0 0 0.010063 1 64559 69.598 54.932 1 2.0619 2.5026 0 17736000 5539800 12196000 1029 439 510 566 1631 1631 DQNYPGAIAIHHPNVAEK 18 1 0 Unmodified _DQNYPGAIAIHHPNVAEK_ 0 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 658.667 3 658.665784 1972.97552 NaN NaN NaN -0.09297 -6.1236E-05 NaN NaN NaN NaN 94.356 0.65347 94.356 94.085 94.738 7.6294E-06 0 0 0 0.0077233 1 52808 42.172 28.942 1 NaN NaN 0 11685000 11685000 0 + 1030 756 511 567 1632 1632 DQNYPGAIAIHHPNVAEK 18 1 0 Unmodified _DQNYPGAIAIHHPNVAEK_ 0 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 659.0003 3 658.665784 1972.97552 NaN NaN NaN -0.45561 -0.00030009 NaN NaN NaN NaN 101.45 3.1356 101.45 100.67 103.81 0 0 0 0 4.3187E-22 5 58896 110.74 83.528 1 NaN NaN 0 2307400000 2307400000 0 + 1031 756 511 567 1633;1634;1635;1636;1637 1636 DQNYPGAIAIHHPNVAEK 18 1 0 Unmodified _DQNYPGAIAIHHPNVAEK_ 0 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 494.2524 4 494.251157 1972.97552 NaN NaN NaN -0.48552 -0.00023997 NaN NaN NaN NaN 101.28 1.0036 101.28 100.69 101.7 7.6294E-06 0 0 0 1.1151E-12 2 57807 95.205 83.304 1 NaN NaN 0 1261200000 1261200000 0 + 1032 756 511 567 1638;1639 1638 DQNYPGAIAIHHPNVAEK 18 1 0 Unmodified _DQNYPGAIAIHHPNVAEK_ 0 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 987.9985 2 987.495038 1972.97552 NaN NaN NaN -0.1342 -0.00013252 NaN NaN NaN NaN 101.36 2.8325 101.36 100.81 103.64 0 0 0 0 0.0039549 1 58636 55.724 40.522 1 NaN NaN 0 35600000 35600000 0 + 1033 756 511 567 1640 1640 DQNYPGAIAIHHPNVAEK 18 1 0 Unmodified _DQNYPGAIAIHHPNVAEK_ 0 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 494.5016 4 494.251157 1972.97552 NaN NaN NaN -0.30283 -0.00014968 NaN NaN NaN NaN 102.29 1.4716 102.29 101.3 102.77 0 0 0 0 6.3857E-09 1 58944 82.765 70.248 1 NaN NaN 0 853450000 853450000 0 + 1034 756 511 567 1641 1641 DQNYPGAIAIHHPNVAEK 18 1 0 Unmodified _DQNYPGAIAIHHPNVAEK_ 0 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 494.2528 4 494.251157 1972.97552 NaN NaN NaN 2.0185 0.00099764 NaN NaN NaN NaN 103.07 0.87063 103.07 102.95 103.82 0 0 0 0 1.4784E-08 1 59502 78.021 62.137 1 NaN NaN 0 394990000 394990000 0 + 1035 756 511 567 1642 1642 DQNYPGAIAIHHPNVAEK 18 1 0 Unmodified _DQNYPGAIAIHHPNVAEK_ 0 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 494.2513 4 494.251157 1972.97552 NaN NaN NaN -0.4134 -0.00020432 NaN NaN NaN NaN 103.3 0.88917 103.3 103.21 104.1 0 0 0 0 1.7071E-11 1 60031 87.24 72.047 1 NaN NaN 0 314300000 314300000 0 + 1036 756 511 567 1643 1643 DQNYPGAIAIHHPNVAEK 18 1 0 Unmodified _DQNYPGAIAIHHPNVAEK_ 0 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 658.6653 3 658.665784 1972.97552 NaN NaN NaN -0.10152 -6.6869E-05 NaN NaN NaN NaN 107.29 0.84885 107.29 106.77 107.61 0 0 0 0 9.7294E-07 1 62729 59.512 37.671 1 NaN NaN 0 7643500 7643500 0 + 1037 756 511 567 1644 1644 DQNYPGAIAIHHPNVAEK 18 1 0 Unmodified _DQNYPGAIAIHHPNVAEK_ 0 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 494.5026 4 494.251157 1972.97552 NaN NaN NaN 0.078544 3.882E-05 NaN NaN NaN NaN 146.08 0.28645 146.08 145.92 146.21 1.5259E-05 0 0 0 0.0010884 1 84266 39.863 29.205 1 NaN NaN 0 5074300 5074300 0 + 1038 756 511 567 1645 1645 DQNYPGAIAIHHPNVAEK 18 1 0 Unmodified _DQNYPGAIAIHHPNVAEK_ 0 0 0 0 CON__P15636 CON__P15636 CON__P15636 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 987.4955 2 987.495038 1972.97552 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.4 1 103.4 102.9 103.9 0 0 0 0 0.0057661 1 59728 50.088 35.212 1 + 1039 756 511 567 1646 1646 DQNYPGAIAIHHPNVAEK 18 1 0 Unmodified _DQNYPGAIAIHHPNVAEK_ 0 0 0 0 CON__P15636 CON__P15636 CON__P15636 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 658.6659 3 658.665784 1972.97552 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.64 1 116.64 116.14 117.14 0 0 0 0 0.024861 1 69757 34.721 23.905 1 + 1040 756 511 567 1647 1647 DQNYPGAIAIHHPNVAEK 18 1 0 Unmodified _DQNYPGAIAIHHPNVAEK_ 0 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 659.0009 3 658.665784 1972.97552 NaN NaN NaN -0.11631 -7.6607E-05 NaN NaN NaN NaN 69.583 2.6061 69.583 68.543 71.149 0 0 0 0 1.0438E-06 3 43761 61.102 43.155 1 NaN NaN 0 75612000 75612000 0 + 1041 756 511 567 1648;1649;1650 1648 DQNYPGAIAIHHPNVAEK 18 1 0 Unmodified _DQNYPGAIAIHHPNVAEK_ 0 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 494.5023 4 494.251157 1972.97552 NaN NaN NaN -0.15715 -7.7673E-05 NaN NaN NaN NaN 69.523 2.0734 69.523 68.855 70.929 0 0 0 0 0.0010207 1 43959 40.432 31.831 1 NaN NaN 0 24907000 24907000 0 + 1042 756 511 567 1651 1651 DQNYPGAIAIHHPNVAEKR 19 1 1 Unmodified _DQNYPGAIAIHHPNVAEKR_ 0 0 0 1 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 533.2769 4 533.276435 2129.07663 NaN NaN NaN -0.075405 -4.0212E-05 NaN NaN NaN NaN 121.23 2.1559 121.23 120.21 122.36 0 0 0 0 2.9263E-06 2 73057 54.974 45.443 1 NaN NaN 0 18182000 18182000 0 + 1043 756 512 568 1652;1653 1652 DQNYPGAIAIHHPNVAEKR 19 1 1 Unmodified _DQNYPGAIAIHHPNVAEKR_ 0 0 0 1 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 711.0346 3 710.699488 2129.07663 NaN NaN NaN 0.20636 0.00014666 NaN NaN NaN NaN 121.12 0.86655 121.12 120.64 121.51 7.6294E-06 0 0 0 4.6275E-09 1 73247 60.034 50.629 1 NaN NaN 0 11351000 11351000 0 + 1044 756 512 568 1654 1654 DQNYPGAIAIHHPNVAEKR 19 1 1 Unmodified _DQNYPGAIAIHHPNVAEKR_ 0 0 0 1 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 710.6992 3 710.699488 2129.07663 NaN NaN NaN -0.083958 -5.9669E-05 NaN NaN NaN NaN 122.11 0.40488 122.11 121.94 122.35 7.6294E-06 0 0 0 1.24E-05 1 73810 51.348 44.316 1 NaN NaN 0 5385600 5385600 0 + 1045 756 512 568 1655 1655 DQNYPGAIAIHHPNVAEKR 19 1 1 Unmodified _DQNYPGAIAIHHPNVAEKR_ 0 0 0 1 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 533.2768 4 533.276435 2129.07663 NaN NaN NaN -0.33324 -0.00017771 NaN NaN NaN NaN 122.87 1.999 122.87 122.3 124.3 7.6294E-06 0 0 0 2.0113E-06 2 74178 55.972 42.784 1 NaN NaN 0 13911000 13911000 0 + 1046 756 512 568 1656;1657 1656 DQNYPGAIAIHHPNVAEKR 19 1 1 Unmodified _DQNYPGAIAIHHPNVAEKR_ 0 0 0 1 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 711.0338 3 710.699488 2129.07663 NaN NaN NaN -0.24823 -0.00017642 NaN NaN NaN NaN 122.92 1.1471 122.92 122.26 123.41 0 0 0 0 0.0006668 1 74412 42.64 24.94 1 NaN NaN 0 8927500 8927500 0 + 1047 756 512 568 1658 1658 DQNYPGAIAIHHPNVAEKR 19 1 1 Unmodified _DQNYPGAIAIHHPNVAEKR_ 0 0 0 1 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 533.5276 4 533.276435 2129.07663 NaN NaN NaN -0.27119 -0.00014462 NaN NaN NaN NaN 123.28 1.2949 123.28 123.1 124.39 -7.6294E-06 0 0 0 2.6382E-10 2 74706 66.874 57.294 1 NaN NaN 0 17711000 17711000 0 + 1048 756 512 568 1659;1660 1659 DQNYPGAIAIHHPNVAEKR 19 1 1 Unmodified _DQNYPGAIAIHHPNVAEKR_ 0 0 0 1 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 711.0347 3 710.699488 2129.07663 NaN NaN NaN -0.18866 -0.00013408 NaN NaN NaN NaN 123.83 0.52888 123.83 123.65 124.18 0 0 0 0 9.0538E-06 2 75107 53.188 43.023 1 NaN NaN 0 6192700 6192700 0 + 1049 756 512 568 1661;1662 1662 DQNYPGAIAIHHPNVAEKR 19 1 1 Unmodified _DQNYPGAIAIHHPNVAEKR_ 0 0 0 1 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 533.2768 4 533.276435 2129.07663 NaN NaN NaN -0.75731 -0.00040385 NaN NaN NaN NaN 125.73 0.21181 125.73 125.61 125.82 0 0 0 0 0.01353 1 76265 24.011 16.207 1 NaN NaN 0 5538000 5538000 0 + 1050 756 512 568 1663 1663 DQNYPGAIAIHHPNVAEKR 19 1 1 Unmodified _DQNYPGAIAIHHPNVAEKR_ 0 0 0 1 CON__P15636 CON__P15636 CON__P15636 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 710.7001 3 710.699488 2129.07663 NaN NaN NaN NaN NaN NaN NaN NaN NaN 120.57 1 120.57 120.07 121.07 0 0 0 0 0.00098682 1 72615 53.278 42.997 1 + 1051 756 512 568 1664 1664 DQPPFGDSDDSVEADK 16 1 0 Phospho (STY) _DQPPFGDS(ph)DDSVEADK_ DQPPFGDS(0.951)DDS(0.049)VEADK DQPPFGDS(12.91)DDS(-12.91)VEADK 0 0 1 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 905.3536 2 901.343643 1800.67273 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.834 1 70.834 70.334 71.334 -7.6294E-06 0 0 0 0.0011824 1 35482 45.723 31.033 2 1052 1059 513 569 1665 1665 1977 DQTCYNIIPLYNSMK 15 1 0 Oxidation (M),Phospho (STY) _DQTCYNIIPLYNS(ph)M(ox)K_ DQTCYNIIPLYNSM(1)K DQT(0.001)CY(0.001)NIIPLY(0.009)NS(0.989)MK DQTCYNIIPLYNSM(43.41)K DQT(-29.5)CY(-29.75)NIIPLY(-20.52)NS(20.52)MK 0 1 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 982.4257 2 978.417577 1954.8206 61588.63 0.66437 0.00065003 -0.75535 -0.00073905 -0.09098 -8.9016E-05 978.918758031598 982.423187695873 116.92 0.87417 116.92 116.32 117.2 0 306 77 6 0 0 0 0.0016366 1 70049 43.408 37.304 4 0.92839 1.1773 0 35919000 18696000 17223000 1053 1167 514 570 1666 1666 325 2262 DQVTAQEIFQDNHEDGPTAK 20 1 0 Unmodified _DQVTAQEIFQDNHEDGPTAK_ 0 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 748.6805 3 748.345216 2242.01382 68953.09 1.312 0.00098186 -0.10398 -7.7815E-05 1.2081 0.00090404 748.679403975934 751.351113826943 90.637 1.1598 90.637 90.011 91.171 0 421 103 7 0 0 0 9.908E-75 2 49908 165.3 165.3 1 0.32573 0.4036 0 133150000 94111000 39043000 1054 963 515 571 1667;1668 1668 DQVTAQEIFQDNHEDGPTAK 20 1 0 Unmodified _DQVTAQEIFQDNHEDGPTAK_ 0 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 748.3459 3 748.345216 2242.01382 NaN NaN NaN -2.3235 -0.0017388 NaN NaN NaN NaN 89.871 0.10425 89.871 89.812 89.916 0 0 0 0 4.6507E-10 2 49339 67.866 41.057 1 NaN NaN 0 6155300 6155300 0 1055 963 515 571 1669;1670 1670 DQVTAQEIFQDNHEDGPTAK 20 1 0 Unmodified _DQVTAQEIFQDNHEDGPTAK_ 0 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1122.5133 2 1122.01419 2242.01382 NaN NaN NaN -2.8063 -0.0031487 NaN NaN NaN NaN 90.302 0.060867 90.302 90.255 90.316 0 0 0 0 0.018012 1 49657 43.184 18.929 1 NaN NaN 0 6907000 6907000 0 1056 963 515 571 1671 1671 DQVTAQEIFQDNHEDGPTAK 20 1 0 Unmodified _DQVTAQEIFQDNHEDGPTAK_ 0 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1122.0138 2 1122.01419 2242.01382 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.309 1 90.309 89.809 90.809 0 0 0 0 0.0048458 1 49663 47.037 27.199 1 1057 963 515 571 1672 1672 DQVTAQEIFQDNHEDGPTAK 20 1 0 Unmodified _DQVTAQEIFQDNHEDGPTAK_ 0 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 748.6799 3 748.345216 2242.01382 70569.16 1.1587 0.00086709 -0.5239 -0.00039206 0.63478 0.00047504 748.678679765927 751.016715352608 79.5 1.337 79.5 79.127 80.464 0 455 126 8 0 0 0 0.029922 1 51181 15.699 15.699 1 0.29005 0.19644 0 25873000 20492000 5380900 1058 963 515 571 1673 1673 DRDPEFYK 8 1 1 Unmodified _DRDPEFYK_ 0 0 0 1 Q9Y3T9;B3KNC3 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 544.2631 2 535.251089 1068.48762 84051.63 0.57698 0.00030883 -0.074233 -3.9733E-05 0.50275 0.0002691 535.25101025256 544.262142655571 77.452 0.85246 77.452 77.107 77.96 -7.6294E-06 283 76 6 0 0 0 0.014895 2 40224 93.178 63.802 1 1.024 1.215 0 61400000 28337000 33063000 1059 1252 516 572 1674;1675 1674 DRDSQITAIEK 11 1 1 Unmodified _DRDSQITAIEK_ 0 0 0 1 B4DGJ5;A0A024R0H6;Q8N7H5 B4DGJ5 B4DGJ5 PAF1 RNA polymerase II-associated factor 1 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 638.3304 2 638.330598 1274.64664 77071.45 0.89799 0.00057322 -0.085605 -5.4644E-05 0.81239 0.00051857 638.33056395656 647.341606654942 77.429 0.58456 77.429 77.179 77.764 7.6294E-06 187 51 5 0 0 0 2.3156E-08 2 40302 111.63 42.973 1 1.6727 1.9805 0 51916000 18990000 32926000 1060 28 517 573 1676;1677 1677 DREEALHQFR 10 0 2 Unmodified _DREEALHQFR_ 0 0 0 1 A0A0D9SFB3;A0A0D9SG12;A0A024R9A4;B5BTY4;Q59GX6;A0A0D9SF53;O15523;O00571;Q5S4N1;B4E132 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3Y;ATP-dependent RNA helicase DDX3X MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 440.8906 3 434.217942 1299.632 NaN NaN NaN NaN NaN NaN NaN NaN NaN 101.44 1 101.44 100.94 101.94 0 0 0 0 0.028749 1 58324 31.843 23.956 1 1061 160 518 574 1678 1678 DREEDEEDAYER 12 0 2 Unmodified _DREEDEEDAYER_ 0 0 0 1 Q16083;P49756 Q16083 Q16083 RBM25 RNA-binding protein 25 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 788.3195 2 778.310788 1554.60702 73080.5 0.83717 0.00065157 0.23114 0.0001799 1.0683 0.00083147 778.811926849624 788.319217418124 63.927 0.28095 63.927 63.742 64.023 0 59 20 6 0 0 0 0.014512 1 30225 64.64 40.349 1 0.96926 1.191 0 26388000 11028000 15360000 1062 1001 519 575 1679 1679 DRETSSIEPLPSDSPK 16 1 1 Phospho (STY) _DRETSSIEPLPS(ph)DSPK_ DRETSSIEPLPS(0.5)DS(0.5)PK DRET(-44.86)S(-44.86)S(-41.38)IEPLPS(0)DS(0)PK 0 0 1 1 A8K932;Q9HAQ2 A8K932 A8K932 KIF9 Kinesin-like protein;Kinesin-like protein KIF9 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 613.6139 3 613.278694 1836.81425 NaN NaN NaN 1.6952 0.0010396 NaN NaN NaN NaN 116.89 0.77039 116.89 116.58 117.35 0 0 0 0 0.00041208 1 70043 46.926 29.987 5 NaN NaN 0 10364000 10364000 0 1063 500 520 576 1680 1680 856;857 DRHSANINLHR 11 0 2 Unmodified _DRHSANINLHR_ 0 0 0 1 D3DRJ1;B4DR27;B1APH0;Q6ZN30 D3DRJ1 D3DRJ1 hCG_27250;BNC2 Zinc finger protein basonuclin-2 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 339.5301 4 333.927446 1331.68068 104582.5 -0.27323 -9.124E-05 0.33756 0.00011272 0.06433 2.1481E-05 334.178336045662 338.931619137914 87.433 0.3263 87.433 87.285 87.611 -7.6294E-06 89 29 4 0 0 0 0.03249 1 47522 15.89 2.0807 1 1.065 1.2997 0 21263000 9704300 11559000 1064 520 521 577 1681 1681 DRPENVHGGILADDMGLGK 19 1 1 Oxidation (M) _DRPENVHGGILADDM(ox)GLGK_ DRPENVHGGILADDM(1)GLGK DRPENVHGGILADDM(41.26)GLGK 0 1 0 1 Q05DQ5;Q05DF7;Q05BZ6;Q59GQ7;A0A0C4DGA6;A8K5B6;Q14527 Q05DQ5 Q05DQ5 HLTF Helicase-like transcription factor MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 676.67 3 670.661822 2008.96364 77326.24 0.80712 0.0005413 -0.24252 -0.00016265 0.56459 0.00037865 670.661662859072 676.66918550764 108.94 0.66605 108.94 108.6 109.26 0 147 54 6 0 0 0 0.00070803 1 63981 41.257 19.723 1 0.48827 0.54121 0 14176000 9752500 4423900 1065 320 522 578 1682 1682 77 DRPSLTVTPK 10 1 1 2 Phospho (STY) _DRPSLT(ph)VT(ph)PK_ DRPS(0.459)LT(0.772)VT(0.769)PK DRPS(-3.69)LT(3.74)VT(3.69)PK 0 0 2 1 A0PJ70;A8K9K0;Q8TF76 A0PJ70 A0PJ70 GSG2 Serine/threonine-protein kinase haspin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 637.2831 2 637.283093 1272.55163 77423.58 0.89857 0.00057264 -0.48101 -0.00030654 0.41756 0.00026611 637.282854084369 646.294117531611 61.138 0.99136 61.138 60.801 61.792 0 293 71 5 0 0 0 0.0066138 1 27953 40.373 23.597 3 0.9488 1.1211 0 46935000 23843000 23092000 1066 400 523 579 1683 1683 683;2714;2715 DRPSLTVTPK 10 1 1 Phospho (STY) _DRPS(ph)LTVTPK_ DRPS(0.743)LT(0.233)VT(0.024)PK DRPS(5.05)LT(-5.05)VT(-14.84)PK 0 0 1 1 A0PJ70;A8K9K0;Q8TF76 A0PJ70 A0PJ70 GSG2 Serine/threonine-protein kinase haspin MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 597.3007 2 597.299928 1192.5853 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.398 1 66.398 65.898 66.898 0 0 0 0 0.01081 1 32305 45.661 32.706 3 1067 400 523 580 1684 1684 683;2714;2715 DRPSLTVTPK 10 1 1 Phospho (STY) _DRPS(ph)LTVTPK_ DRPS(0.979)LT(0.011)VT(0.011)PK DRPS(19.69)LT(-19.69)VT(-19.69)PK 0 0 1 1 A0PJ70;A8K9K0;Q8TF76 A0PJ70 A0PJ70 GSG2 Serine/threonine-protein kinase haspin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 606.3125 2 597.299928 1192.5853 79856.27 0.8173 0.00048817 0.05204 3.1083E-05 0.86934 0.00051926 597.299726110365 606.311185224961 46.829 1.9224 46.829 46.026 47.948 0 546 179 5 0 0 0 0.0012555 1 28148 76.24 76.24 3 2.0063 1.5349 0 16326000 5766500 10560000 1068 400 523 580 1685 1685 683;2714;2715 DRSEEEFER 9 0 2 Unmodified _DRSEEEFER_ 0 0 0 1 A0A024R3K9;A0A024R3N2;Q6P4R8;E9PQ59;B4DSL1 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 598.7625 2 598.762549 1195.51054 83227.36 0.62593 0.00037479 -0.18581 -0.00011125 0.44013 0.00026353 598.76220645945 608.77078173877 67.323 0.45748 67.323 67.102 67.559 0 96 41 4 0 0 0 0.03244 1 33112 52.49 29.061 1 0.60427 0.73202 0 17653000 10280000 7372600 1069 76 524 581 1686 1686 DRTTSFFLNSPEK 13 1 1 Phospho (STY) _DRTTSFFLNS(ph)PEK_ DRTTSFFLNS(1)PEK DRT(-74.71)T(-74.71)S(-74.71)FFLNS(74.71)PEK 0 0 1 1 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 820.3774 2 811.366528 1620.7185 67117.95 1.5156 0.0012297 -0.17699 -0.0001436 1.3386 0.0010861 811.366204005493 820.377552305105 101.78 1.5579 101.78 101.04 102.59 0 755 127 8 0 0 0 2.7825E-20 3 58478 132.81 112.43 4 1.4612 1.7515 0 134150000 56403000 77745000 1070 1170 525 582 1687;1688;1689 1687 2284 DRTTSFFLNSPEK 13 1 1 Phospho (STY) _DRTTSFFLNS(ph)PEK_ DRT(0.002)T(0.002)S(0.002)FFLNS(0.994)PEK DRT(-27.04)T(-27.04)S(-27.04)FFLNS(27.04)PEK 0 0 1 1 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 820.3784 2 811.366528 1620.7185 67084.51 0.90382 0.00073333 0.31406 0.00025482 1.2179 0.00098815 811.367083699684 820.378007508886 95.448 2.9317 95.448 94.003 96.935 0 1768 283 12 0 0 0 0.0040835 3 61873 53.168 52.42 4 2.7406 2.1236 0 897330000 250740000 646590000 1071 1170 525 582 1690;1691;1692 1692 2284 DRTTSFFLNSPEK 13 1 1 Phospho (STY) _DRTTSFFLNS(ph)PEK_ DRTTSFFLNS(1)PEK DRT(-42.26)T(-42.26)S(-42.1)FFLNS(42.1)PEK 0 0 1 1 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 547.2551 3 541.246777 1620.7185 82564.57 0.72358 0.00039164 0.096365 5.2157E-05 0.81995 0.00044379 541.246756113797 547.254291950651 95.489 0.86186 95.489 95.015 95.877 0 345 85 6 0 0 0 0.0023808 1 61624 44.998 40.197 4 2.5764 1.9672 0 18244000 4256900 13987000 1072 1170 525 582 1693 1693 2284 DRVLDDVSIRSPETK 15 1 2 Phospho (STY) _DRVLDDVSIRS(ph)PETK_ DRVLDDVS(0.208)IRS(0.791)PETK DRVLDDVS(-5.8)IRS(5.8)PET(-32.39)K 0 0 1 2 E7ETD6;Q12830;F5GXF5 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 604.2993 3 603.962929 1808.86696 NaN NaN NaN -0.091527 -5.5279E-05 NaN NaN NaN NaN 93.52 0.80237 93.52 93.203 94.006 -7.6294E-06 0 0 0 8.067E-06 1 51996 84.581 65.719 3 NaN NaN 0 67483000 67483000 0 1073 791 526 583 1694 1694 1333;1334 DRVLDDVSIRSPETK 15 1 2 Phospho (STY) _DRVLDDVSIRS(ph)PETK_ DRVLDDVS(0.028)IRS(0.937)PET(0.035)K DRVLDDVS(-15.19)IRS(14.29)PET(-14.29)K 0 0 1 2 E7ETD6;Q12830;F5GXF5 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 603.9634 3 603.962929 1808.86696 76846.05 0.93293 0.00056345 -0.22516 -0.00013599 0.70777 0.00042747 603.963027952217 613.306541522028 71.482 2.0581 71.482 70.68 72.738 0 1094 188 9 0 0 0 1.6557E-18 1 45274 113.63 94.563 3 1.8372 1.6568 0 82616000 30379000 52236000 1074 791 526 583 1695 1695 1333;1334 DSAAFEDNEVQDEFLEK 17 1 0 Unmodified _DSAAFEDNEVQDEFLEK_ 0 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 997.4451 2 993.434174 1984.8538 NaN NaN NaN -0.21011 -0.00020873 NaN NaN NaN NaN 106.11 0.47289 106.11 105.9 106.37 7.6294E-06 0 0 0 1.4177E-10 1 61599 89.959 75.397 1 NaN NaN 0 14772000 0 14772000 1075 1232 527 584 1696 1696 DSALAEAPEGLSPAPPAR 18 0 1 Phospho (STY) _DSALAEAPEGLS(ph)PAPPAR_ DSALAEAPEGLS(1)PAPPAR DS(-85.77)ALAEAPEGLS(85.77)PAPPAR 0 0 1 0 C9JPC9;B4DWG7;A4D2N6;Q9H9J4 C9JPC9 C9JPC9 USP42 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 42 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 919.9335 2 914.927481 1827.84041 67920.57 0.9894 0.00090523 0.62598 0.00057273 1.6154 0.001478 914.927810984191 920.433279596566 92.961 0.52553 92.961 92.741 93.266 0 128 43 4 0 0 0 2.9032E-23 3 51654 111.33 99.805 2 1.6106 1.98 0 28492000 12939000 15553000 1076 419 528 585 1697;1698;1699 1697 713 DSALETLQGQLEEK 14 1 0 Unmodified _DSALETLQGQLEEK_ 0 0 0 0 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q96HN5;H0YFY6;Q7Z757;Q59HB8;A0A024R5G4 A0A087WY61 A0A087WY61 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 781.3941 2 780.891217 1559.76788 72096.63 1.2137 0.00094779 0.20703 0.00016167 1.4208 0.0011095 780.891395792681 784.898517507996 107.16 0.73035 107.16 106.87 107.6 0 301 69 6 0 0 0 0.010538 2 69121 44.299 44.299 1 1.5981 1.2201 0 17571000 7554600 10016000 1077 110 529 586 1700;1701 1701 DSAYQSITHYRPVSASR 17 0 2 Unmodified _DSAYQSITHYRPVSASR_ 0 0 0 1 P50402;Q5HY57 P50402 P50402 EMD Emerin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 653.326 3 646.653656 1936.93914 75575.66 0.86356 0.00055842 0.073681 4.7646E-05 0.93724 0.00060607 646.987877192892 653.326212560065 106.79 0.95518 106.79 106.57 107.53 0 301 80 6 0 0 0 4.5681E-09 3 62309 84.842 79.84 1 0.74947 0.92905 0 36337000 21864000 14473000 1078 1002 530 587 1702;1703;1704 1703 DSDDKTPDDDPEQGKSEEEPNK 22 3 0 Unmodified _DSDDKTPDDDPEQGKSEEEPNK_ 0 0 0 2 F5H176 F5H176 F5H176 BPTF MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 825.6819 3 825.68077 2474.02048 65896.95 1.0097 0.00083369 -0.88468 -0.00073046 0.12502 0.00010323 825.68025754542 833.694050648718 16.855 0.43535 16.855 16.689 17.124 0 74 15 8 0 0 0 0.00023279 1 4132 33.909 33.909 1 1.6443 1.5173 0 8286400 2704200 5582200 1079 826 531 588 1705 1705 DSDEADLVLAK 11 1 0 Unmodified _DSDEADLVLAK_ 0 0 0 0 A4D177;Q13185 A4D177 A4D177 CBX3 Chromobox protein homolog 3 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 592.3004 2 588.29315 1174.57175 NaN NaN NaN -0.42735 -0.00025141 NaN NaN NaN NaN 84.54 0.12252 84.54 84.497 84.62 0 0 0 0 1.9245E-09 1 45566 96.331 77.237 1 NaN NaN 0 8888700 0 8888700 1080 411 532 589 1706 1706 DSDEADLVLAK 11 1 0 Unmodified _DSDEADLVLAK_ 0 0 0 0 A4D177;Q13185 A4D177 A4D177 CBX3 Chromobox protein homolog 3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 592.2795 2 588.29315 1174.57175 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.769 1 84.769 84.269 85.269 0 0 0 0 5.6306E-08 1 45683 125.82 102.75 1 1081 411 532 589 1707 1707 DSDEADLVLAK 11 1 0 Unmodified _DSDEADLVLAK_ 0 0 0 0 A4D177;Q13185 A4D177 A4D177 CBX3 Chromobox protein homolog 3 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 588.3069 2 588.29315 1174.57175 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.136 1 85.136 84.636 85.636 0 0 0 0 0.0068537 1 45942 52.579 37.428 1 1082 411 532 589 1708 1708 DSDEADLVLAK 11 1 0 Unmodified _DSDEADLVLAK_ 0 0 0 0 A4D177;Q13185 A4D177 A4D177 CBX3 Chromobox protein homolog 3 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 592.3009 2 588.29315 1174.57175 NaN NaN NaN -0.44511 -0.00026185 NaN NaN NaN NaN 79.528 0.47974 79.528 79.308 79.787 0 0 0 0 0.0072077 1 50800 63.184 39.756 1 NaN NaN 0 4909000 0 4909000 1083 411 532 589 1709 1709 DSDYVYPSLESDEDNPIFK 19 1 0 Phospho (STY) _DSDYVYPS(ph)LESDEDNPIFK_ DSDYVY(0.015)PS(0.492)LES(0.492)DEDNPIFK DS(-46.8)DY(-40.82)VY(-15.14)PS(0)LES(0)DEDNPIFK 0 0 1 0 O75151;Q8N359;B4DH04;E7ET14;A0A087WW48;Q6P2C5 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1157.4808 2 1156.97776 2311.94097 56321.42 0.38782 0.00044869 0.096212 0.00011132 0.48403 0.00056001 1157.4804249707 1161.48643798874 124.29 1.1748 124.29 123.53 124.71 7.6294E-06 632 104 10 0 0 0 9.0474E-07 1 75207 57.175 51.918 5 1.1345 1.4108 0 83842000 39286000 44556000 1084 934 533 590 1710 1710 1593;1594 DSEEAEIIRK 10 1 1 Unmodified _DSEEAEIIRK_ 0 0 0 1 B2R5W3;A0A024R3T8;P09874 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 595.3068 2 595.306592 1188.59863 NaN NaN NaN 1.8191 0.0010829 NaN NaN NaN NaN 73.311 0.2785 73.311 73.174 73.453 0 0 0 0 1.9471E-22 1 37248 126.24 98.024 1 NaN NaN 0 9548600 9548600 0 1085 81 534 591 1711 1711 DSEEFGENEEENVHSK 16 1 0 Unmodified _DSEEFGENEEENVHSK_ 0 0 0 0 A0A024R5X3;Q9NWH9;H0YKU6;H0YL55;H7BXE3 A0A024R5X3 A0A024R5X3 SLTM SAFB-like transcription modulator MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 943.8929 2 939.884849 1877.75514 65412.78 0.78205 0.00073503 0.42442 0.00039891 1.2065 0.0011339 939.884611442109 944.394714934671 63.42 0.22983 63.42 63.338 63.568 0 41 19 5 0 0 0 0.010054 1 29888 34.898 24.702 1 0.84673 1.0045 0 10194000 5052200 5142100 1086 114 535 592 1712 1712 DSEHIDDETRR 11 0 2 Unmodified _DSEHIDDETRR_ 0 0 0 1 A0A087X1U6;P58107;A0A075B730 A0A087X1U6 A0A087X1U6 EPPK1 Epiplakin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 458.2078 3 458.207771 1371.60148 88027.08 0.036059 1.6522E-05 -0.15773 -7.2273E-05 -0.12167 -5.575E-05 458.20763668188 464.87990604646 66.7 0.41182 66.7 66.5 66.911 0 136 27 7 0 0 0 1.5651E-09 2 32550 93.839 77.207 1 1.7299 2.1582 0 168990000 60455000 108540000 1087 273 536 593 1713;1714 1713 DSENLASPSEYPENGER 17 0 1 Phospho (STY) _DSENLAS(ph)PSEYPENGER_ DS(0.004)ENLAS(0.987)PS(0.008)EYPENGER DS(-23.82)ENLAS(20.66)PS(-20.66)EY(-38.13)PENGER 0 0 1 0 A0A024RCC4;P52948;B4DWF8;A8KA17;Q86TI1 A0A024RCC4 A0A024RCC4 NUP98;NUP98/HOXC13 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 992.3981 2 987.391656 1972.76876 61838.99 0.34904 0.00034464 0.25694 0.0002537 0.60598 0.00059834 987.391506387977 992.396413496779 65.697 0.81793 65.697 65.232 66.05 0 255 62 6 0 0 0 4.0142E-05 1 31437 65.225 46.154 4 1.6848 2.071 0 29349000 11826000 17523000 1088 209 537 594 1715 1715 324 DSETVDEDEEVDPALTVGTIK 21 1 0 Phospho (STY) _DS(ph)ETVDEDEEVDPALTVGTIK_ DS(0.841)ET(0.159)VDEDEEVDPALTVGTIK DS(7.23)ET(-7.23)VDEDEEVDPALT(-77.24)VGT(-81.16)IK 0 0 1 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1171.5105 2 1171.51217 2341.00978 56673.86 0.3284 0.00038472 0.44168 0.00051744 0.77008 0.00090216 1172.01420053871 1175.5190816785 113.48 0.62483 113.48 113.13 113.75 0 216 56 6 0 0 0 2.0581E-15 2 67388 81.157 81.157 4 1.3945 1.7131 0 21946000 8496900 13449000 1089 1061 538 595 1716;1717 1717 1995 DSFFLDLSCEK 11 1 0 Phospho (STY) _DSFFLDLS(ph)CEK_ DSFFLDLS(1)CEK DS(-60.54)FFLDLS(60.54)CEK 0 0 1 0 C9JP83;C9J6P7;A0JLP9;E9PH71;B4DQJ4;B4DLM8;O15381 C9JP83 C9JP83 NVL Nuclear valosin-containing protein-like MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 720.7927 2 720.791276 1439.568 74921.02 0.90163 0.00064988 -0.032336 -2.3308E-05 0.86929 0.00062658 720.791161999108 724.798353052764 124.43 0.55189 124.43 124.2 124.75 0 154 48 5 0 0 0 0.0061562 2 75435 65.295 55.243 2 0.8767 1.0383 0 4954400 2233800 2720600 1090 395 539 596 1718;1719 1719 675 DSFFLDLSCEK 11 1 0 Phospho (STY) _DSFFLDLS(ph)CEK_ DSFFLDLS(1)CEK DS(-55.06)FFLDLS(55.06)CEK 0 0 1 0 C9JP83;C9J6P7;A0JLP9;E9PH71;B4DQJ4;B4DLM8;O15381 C9JP83 C9JP83 NVL Nuclear valosin-containing protein-like MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 724.799 2 720.791276 1439.568 72345.95 1.0009 0.00072144 -0.040853 -2.9447E-05 0.96005 0.00069199 720.791264213901 724.798429627104 133.37 0.71454 133.37 133.04 133.75 0 328 66 8 0 0 0 0.0084365 1 85902 58.098 43.841 2 2.0477 1.5556 0 7879700 2517600 5362100 1091 395 539 596 1720 1720 675 DSGNLYDSEIQNVLGVK 17 1 0 Phospho (STY) _DS(ph)GNLYDSEIQNVLGVK_ DS(0.805)GNLY(0.188)DS(0.007)EIQNVLGVK DS(6.32)GNLY(-6.32)DS(-20.48)EIQNVLGVK 0 0 1 0 B7Z7S9;Q562F6 B7Z7S9 B7Z7S9 SGOL2 Shugoshin-like 2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 970.4523 2 965.943328 1929.8721 NaN NaN NaN 0.029593 2.8585E-05 NaN NaN NaN NaN 129.25 0.61722 129.25 128.95 129.57 0 0 0 0 7.0292E-07 2 78458 58.159 42.587 3 NaN NaN 0 8974600 0 8974600 1092 713 540 597 1721;1722 1722 1180 DSGRLSPDLSVCGQPR 16 0 2 Phospho (STY) _DS(ph)GRLSPDLSVCGQPR_ DS(0.6)GRLS(0.394)PDLS(0.006)VCGQPR DS(1.82)GRLS(-1.82)PDLS(-19.82)VCGQPR 0 0 1 1 A0PJ70;A8K9K0;Q8TF76 A0PJ70 A0PJ70 GSG2 Serine/threonine-protein kinase haspin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 608.609 3 608.60838 1822.80331 77260.72 1.0428 0.00063465 -0.42183 -0.00025673 0.62095 0.00037792 608.608392864415 615.280404861475 79.627 1.5555 79.627 79.055 80.611 0 851 148 9 0 0 0 0.0005008 1 50871 40.756 40.756 3 2.0623 1.7897 0 58632000 17459000 41172000 1093 400 541 598 1723 1723 684 DSGSFEQYSENIK 13 1 0 Phospho (STY) _DS(ph)GSFEQYSENIK_ DS(0.842)GS(0.158)FEQYSENIK DS(7.26)GS(-7.26)FEQY(-75.73)S(-82.19)ENIK 0 0 1 0 B3KWI2;Q8IZT6;B3KM85;Q5VYL4 B3KWI2 B3KWI2 ASPM Abnormal spindle-like microcephaly-associated protein ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 792.3185 2 792.3167 1582.61885 NaN NaN NaN 0.50361 0.00039902 NaN NaN NaN NaN 80.265 0.58374 80.265 79.788 80.372 0 0 0 0 1.8006E-06 1 42198 91.62 56.66 4 NaN NaN 0 10430000 10430000 0 1094 606 542 599 1724 1724 996 DSGSFEQYSENIK 13 1 0 Phospho (STY) _DS(ph)GSFEQYSENIK_ DS(0.907)GS(0.093)FEQYSENIK DS(9.88)GS(-9.88)FEQY(-66.38)S(-69.31)ENIK 0 0 1 0 B3KWI2;Q8IZT6;B3KM85;Q5VYL4 B3KWI2 B3KWI2 ASPM Abnormal spindle-like microcephaly-associated protein MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 796.324 2 792.3167 1582.61885 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.044 1 80.044 79.544 80.544 0 0 0 0 1.6978E-05 1 42323 77.912 57.531 4 1095 606 542 599 1725 1725 996 DSGSQEVLSELR 12 0 1 Phospho (STY) _DSGS(ph)QEVLSELR_ DSGS(1)QEVLSELR DS(-54.68)GS(54.68)QEVLS(-193.81)ELR 0 0 1 0 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 700.3107 2 700.308678 1398.6028 72620.46 1.4105 0.00098776 0.20702 0.00014498 1.6175 0.0011327 700.308829264899 705.312852647854 96.773 1.6057 96.773 95.855 97.461 0 637 135 7 0 0 0 0 3 54699 297.16 254.67 3 0.36195 0.45721 0 128150000 96524000 31623000 1096 1199 543 600 1726;1727;1728 1728 2379 DSGSQEVLSELR 12 0 1 Phospho (STY) _DSGS(ph)QEVLSELR_ DS(0.168)GS(0.832)QEVLSELR DS(-6.96)GS(6.96)QEVLS(-63.7)ELR 0 0 1 0 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 700.3087 2 700.308678 1398.6028 73592.2 1.0626 0.00074416 0.03916 2.7424E-05 1.1018 0.00077159 700.308686370166 705.312946715589 102.64 1.2927 102.64 102.11 103.4 0 718 123 8 0 0 0 0.00089058 1 66230 79.639 62.203 3 0.3232 0.21826 0 79279000 60387000 18892000 1097 1199 543 600 1729 1729 2379 DSGSQEVLSELR 12 0 1 Unmodified _DSGSQEVLSELR_ 0 0 0 0 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 665.3303 2 660.325513 1318.63647 NaN NaN NaN 0.76936 0.00050803 NaN NaN NaN NaN 93.306 0.29448 93.306 93.191 93.485 0 0 0 0 0.0006531 1 51986 83 61.007 1 NaN NaN 0 6665300 0 6665300 1098 1199 543 601 1730 1730 DSITPDIATKPGQPLFLDSISPK 23 2 0 Phospho (STY) _DSITPDIATKPGQPLFLDS(ph)ISPK_ DSITPDIATKPGQPLFLDS(0.57)IS(0.43)PK DS(-76.18)IT(-67.67)PDIAT(-37.25)KPGQPLFLDS(1.22)IS(-1.22)PK 0 0 1 1 B7Z4V7;Q2TB10;Q49A13 B7Z4V7 B7Z4V7 ZNF800 Zinc finger protein 800 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 841.0954 3 840.759289 2519.25604 65103.72 1.0314 0.00086718 0.039251 3.3E-05 1.0707 0.00090018 841.093600311236 846.436448215372 131.76 0.52698 131.76 131.54 132.07 0 403 49 12 0 0 0 2.6427E-19 2 84990 83.944 75.951 5 1.4478 1.1013 0 50549000 21945000 28604000 1099 705 544 602 1731;1732 1732 1163;1164;1165;2800 DSLIDSLT 8 0 0 Phospho (STY) _DSLIDSLT(ph)_ DSLIDSLT(1) DS(-165.2)LIDS(-39.88)LT(39.88) 0 0 1 0 P56537 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 ISO-MSMS -1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 943.4016 1 943.401985 942.394708 NaN NaN NaN 1.1748 0.0011083 NaN NaN NaN NaN 108.97 1.0305 108.97 108.45 109.49 0 0 0 0 2.171E-143 2 63931 195.88 159.12 3 1100 1010 545 603 1733;1734 1734 1842;2901 DSLIDSLT 8 0 0 Phospho (STY) _DSLIDS(ph)LT_ DSLIDS(0.945)LT(0.055) DS(-37.38)LIDS(12.38)LT(-12.38) 0 0 1 0 P56537 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 ISO-MSMS -1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 945.41 1 943.401985 942.394708 NaN NaN NaN 0.37549 0.00035424 NaN NaN NaN NaN 114.49 1.1462 114.49 114.07 115.21 0 0 0 0 0.014619 1 68133 46.334 29.103 3 1101 1010 545 603 1735 1735 1842;2901 DSMNATSTPAALSPSVLTTPSK 22 1 0 Oxidation (M),Phospho (STY) _DSM(ox)NATSTPAALS(ph)PSVLTTPSK_ DSM(1)NATSTPAALSPSVLTTPSK DSMNATSTPAALS(0.822)PS(0.166)VLT(0.008)T(0.002)PS(0.001)K DSM(76.7)NATSTPAALSPSVLTTPSK DS(-47.26)MNAT(-39.33)S(-33.99)T(-33.99)PAALS(6.94)PS(-6.94)VLT(-19.99)T(-25.75)PS(-31.36)K 0 1 1 0 B7Z830;B4DSW6;A8K194;P54198 B7Z830 B7Z830 HIRA Protein HIRA MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1136.5247 2 1136.52436 2271.03416 58743.93 0.42419 0.00048211 0.79993 0.00090914 1.2241 0.0013912 1136.52534296013 1141.03394718059 107.72 0.56561 107.72 107.47 108.03 7.6294E-06 149 41 6 0 0 0 7.2911E-15 2 62913 76.704 70.428 9 0.6275 0.76734 0 19531000 11198000 8332500 1102 443 546 604 1736;1737 1736 115 768 DSNAPKSPLTGYVR 14 1 1 Phospho (STY) _DSNAPKS(ph)PLTGYVR_ DSNAPKS(0.999)PLT(0.001)GYVR DS(-54.07)NAPKS(32.17)PLT(-32.17)GY(-53.76)VR 0 0 1 1 H0YNS8;H0YKM5;Q9NP66 H0YNS8 H0YNS8 HMG20A High mobility group protein 20A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 802.3875 2 792.87452 1583.73449 68542.34 1.1813 0.00093666 -0.13995 -0.00011096 1.0414 0.00082569 792.874396716983 801.885714921224 69.111 1.6147 69.111 68.161 69.776 0 817 140 9 0 0 0 3.6981E-08 1 43186 95.236 85.804 4 0.94294 0.72813 0 119460000 60975000 58481000 1103 861 547 605 1738 1738 1467 DSNAPKSPLTGYVR 14 1 1 Phospho (STY) _DSNAPKS(ph)PLTGYVR_ DSNAPKS(0.999)PLT(0.001)GYVR DS(-61.52)NAPKS(32.53)PLT(-32.53)GY(-56.81)VR 0 0 1 1 H0YNS8;H0YKM5;Q9NP66 H0YNS8 H0YNS8 HMG20A High mobility group protein 20A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 528.9191 3 528.918772 1583.73449 83178.44 0.93605 0.00049509 -0.2916 -0.00015423 0.64445 0.00034086 528.918568651962 534.926077710183 69.031 1.1457 69.031 68.492 69.638 0 596 99 8 0 0 0 2.6579E-06 1 43390 84.895 75.844 4 0.92368 0.71196 0 41217000 21336000 19881000 1104 861 547 605 1739 1739 1467 DSNELSDSAGEEDSADLK 18 1 0 2 Phospho (STY) _DSNELS(ph)DS(ph)AGEEDSADLK_ DS(0.156)NELS(0.921)DS(0.921)AGEEDS(0.001)ADLK DS(-10.33)NELS(10.33)DS(10.33)AGEEDS(-32.09)ADLK 0 0 2 0 Q9Y6X9 Q9Y6X9 Q9Y6X9 MORC2 MORC family CW-type zinc finger protein 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1025.3678 2 1021.36158 2040.7086 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.256 1 63.256 62.756 63.756 -3.8147E-06 0 0 0 0.0033545 1 29747 44.511 38.665 6 1105 1257 548 606 1740 1740 2589;2590 DSPAFPDSPWR 11 0 1 Phospho (STY) _DSPAFPDS(ph)PWR_ DSPAFPDS(1)PWR DS(-83.69)PAFPDS(83.69)PWR 0 0 1 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 677.7776 2 677.776817 1353.53908 74439.98 1.2977 0.00087956 -0.33999 -0.00023044 0.95773 0.00064913 677.776363183206 682.780861124803 102.45 1.0894 102.45 101.86 102.95 0 366 83 6 0 0 0 2.2349E-10 3 58843 120.87 110.61 2 0.63086 0.77894 0 33004000 20167000 12837000 1106 1212 549 607 1741;1742;1743 1742 2420;2421 DSPAFPDSPWR 11 0 1 Phospho (STY) _DS(ph)PAFPDSPWR_ DS(1)PAFPDSPWR DS(70.2)PAFPDS(-70.2)PWR 0 0 1 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 682.7803 2 677.776817 1353.53908 74891.51 0.66044 0.00044763 -0.014587 -9.887E-06 0.64585 0.00043774 677.776788100334 682.780771210732 106.65 1.1388 106.65 106.03 107.17 0 369 87 6 0 0 0 0.0014608 3 61970 77.541 60.374 2 0.94963 1.1944 0 44779000 22027000 22752000 1107 1212 549 607 1744;1745;1746 1745 2420;2421 DSPAFPDSPWR 11 0 1 Phospho (STY) _DSPAFPDS(ph)PWR_ DSPAFPDS(1)PWR DS(-53.7)PAFPDS(53.7)PWR 0 0 1 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 682.7823 2 677.776817 1353.53908 76125.45 1.1624 0.00078784 -0.24653 -0.00016709 0.91586 0.00062075 677.77638739572 682.780871908296 108.24 0.97563 108.24 107.74 108.72 0 392 95 6 0 0 0 0.0061562 1 69468 65.295 62.072 2 1.2854 1.0047 0 15037000 7384200 7653100 1108 1212 549 607 1747 1747 2420;2421 DSPAFPDSPWR 11 0 1 2 Phospho (STY) _DS(ph)PAFPDS(ph)PWR_ DS(1)PAFPDS(1)PWR DS(41.09)PAFPDS(41.09)PWR 0 0 2 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 722.765 2 717.759982 1433.50541 73964.03 0.88345 0.00063411 0.061695 4.4282E-05 0.94515 0.00067839 717.760022313875 722.764172904849 107.69 0.65598 107.69 107.36 108.02 0 107 48 4 0 0 0 0.015656 1 62933 41.092 33.871 1 0.57675 0.6625 0 11870000 7739900 4130500 1109 1212 549 608 1748 1748 2420;2421 DSSFTEVPRSPK 12 1 1 Phospho (STY) _DSSFTEVPRS(ph)PK_ DSSFTEVPRS(1)PK DS(-66.07)S(-61.54)FT(-52.23)EVPRS(52.23)PK 0 0 1 1 O95425 O95425 O95425 SVIL Supervillin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 724.3327 2 715.321589 1428.62862 70683.77 0.57 0.00040773 0.35553 0.00025432 0.92552 0.00066205 715.322306101975 724.332872279119 66.061 0.76331 66.061 65.721 66.484 0 214 58 6 0 0 0 1.1153E-14 1 31835 118.76 103.56 4 3.9956 4.7504 0 71556000 17135000 54421000 1110 948 550 609 1749 1749 1640 DSSFTEVPRSPK 12 1 1 Phospho (STY) _DSSFTEVPRS(ph)PK_ DSSFT(0.002)EVPRS(0.998)PK DS(-46.61)S(-34.68)FT(-26.81)EVPRS(26.81)PK 0 0 1 1 O95425 O95425 O95425 SVIL Supervillin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 724.3337 2 715.321589 1428.62862 72415.28 1.1839 0.0008469 0.29077 0.00020799 1.4747 0.0010549 715.321413179773 724.332991405527 51.393 2.2285 51.393 50.347 52.575 -3.8147E-06 692 201 6 0 0 0 7.2601E-05 2 31148 89.992 80.459 4 6.3718 4.9136 0 54346000 6879600 47466000 1111 948 550 609 1750;1751 1750 1640 DSSGQEDETQSSNDDPSQSVASQDAQEIIRPR 32 0 2 Phospho (STY) _DS(ph)SGQEDETQSSNDDPSQSVASQDAQEIIRPR_ DS(0.459)S(0.459)GQEDET(0.062)QS(0.009)S(0.009)NDDPSQSVASQDAQEIIRPR DS(0)S(0)GQEDET(-8.67)QS(-16.99)S(-16.99)NDDPS(-32.38)QS(-32.01)VAS(-51.16)QDAQEIIRPR 0 0 1 1 Q8N108 Q8N108 Q8N108 MIER1 Mesoderm induction early response protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1193.5118 3 1186.16963 3555.48706 56775.64 0.42171 0.00050022 0.38948 0.00046199 0.81119 0.00096221 1186.50503560304 1193.50977880123 89.616 0.89168 89.616 89.193 90.085 -7.6294E-06 390 76 8 0 0 0 1.5987E-17 1 49045 60.79 57.383 8 0.96479 1.1978 0 53156000 26204000 26951000 1112 1149 551 610 1752 1752 2207;2208 DSSGQEDETQSSNDDPSQSVASQDAQEIIRPR 32 0 2 Unmodified _DSSGQEDETQSSNDDPSQSVASQDAQEIIRPR_ 0 0 0 1 Q8N108 Q8N108 Q8N108 MIER1 Mesoderm induction early response protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1166.8569 3 1159.51419 3475.52073 56320.18 0.45045 0.0005223 0.3751 0.00043494 0.82555 0.00095724 1160.18244912776 1166.85532786558 85.545 0.7243 85.545 85.159 85.883 7.6294E-06 225 67 6 0 0 0 0.033845 1 54863 18.788 16.65 1 1.9804 1.7094 0 23139000 6365800 16773000 1113 1149 551 611 1753 1753 DSSLVNEQSQITR 13 0 1 Phospho (STY) _DSS(ph)LVNEQSQITR_ DS(0.152)S(0.848)LVNEQSQITR DS(-7.46)S(7.46)LVNEQS(-89.32)QIT(-101.96)R 0 0 1 0 B4DZG2;A0A024R8C1;Q15361 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 778.8524 2 778.851242 1555.68793 71055.63 0.69258 0.00053942 -0.19264 -0.00015004 0.49994 0.00038938 778.851499739732 783.85520004698 65.409 0.62634 65.409 65.176 65.802 0 102 46 4 0 0 0 1.4094E-10 3 31495 109 98.474 4 0.7589 0.9141 0 18551000 7529500 11021000 1114 150 552 612 1754;1755;1756 1755 227 DSVAQGTTNVHSSEHAGR 18 0 1 Unmodified _DSVAQGTTNVHSSEHAGR_ 0 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 618.2895 3 618.289265 1851.84597 76348.67 0.60738 0.00037553 -0.026878 -1.6619E-05 0.5805 0.00035892 618.289556673158 621.625333345861 64.796 1.0656 64.796 64.372 65.438 0 443 78 12 0 0 0 4.2296E-32 2 31095 127.22 112.64 1 1.7363 2.2034 0 1740700000 640920000 1099800000 1115 994 553 613 1757;1758 1758 DSVAQGTTNVHSSEHAGR 18 0 1 Unmodified _DSVAQGTTNVHSSEHAGR_ 0 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 931.9344 2 926.930259 1851.84597 64480.5 0.63606 0.00058958 0.34068 0.00031578 0.97674 0.00090537 926.930532921216 931.934619082374 64.806 0.23672 64.806 64.671 64.908 0 69 17 6 0 0 0 2.6001E-05 2 30897 52.071 46.352 1 1.4442 1.7758 0 27250000 12224000 15027000 1116 994 553 613 1759;1760 1759 DSVAQGTTNVHSSEHAGR 18 0 1 Unmodified _DSVAQGTTNVHSSEHAGR_ 0 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 931.9352 2 926.930259 1851.84597 63111.59 0.56246 0.00052136 0.33281 0.00030849 0.89527 0.00082985 926.930734822175 931.934827815459 15.367 0.34385 15.367 15.239 15.582 0 60 9 10 0 0 0 1.6512E-31 2 3062 133.66 120.54 1 3.5486 2.4383 0 46587000 10157000 36431000 1117 994 553 613 1761;1762 1762 DSVAQGTTNVHSSEHAGR 18 0 1 Unmodified _DSVAQGTTNVHSSEHAGR_ 0 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 618.2909 3 618.289265 1851.84597 76882.09 0.55312 0.00034199 0.43309 0.00026778 0.98621 0.00060976 618.290236481773 621.626145350682 15.393 0.52383 15.393 15.239 15.762 0 119 21 10 0 0 0 6.1709E-08 1 3061 73.208 66.317 1 3.2925 2.1582 0 348400000 81367000 267030000 1118 994 553 613 1763 1763 DTDEADLVLAK 11 1 0 Unmodified _DTDEADLVLAK_ 0 0 0 0 V9HWG0;P45973 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 599.3103 2 595.300975 1188.5874 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.148 1 86.148 85.648 86.648 0 0 0 0 0.020469 1 46638 43.282 18.359 1 1119 993 554 614 1764 1764 DTDEADLVLAK 11 1 0 Unmodified _DTDEADLVLAK_ 0 0 0 0 V9HWG0;P45973 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 599.3084 2 595.300975 1188.5874 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.512 1 86.512 86.012 87.012 0 0 0 0 0.0024373 1 46889 63.816 26.258 1 1120 993 554 614 1765 1765 DTDSDREAGTETGGENNDKEEEEKK 25 3 1 Unmodified _DTDSDREAGTETGGENNDKEEEEKK_ 0 0 0 3 Q75MP9;F2YMM1;Q75MQ0;S4S3R8;A0A090N8E9;Q15910;B7Z8K5 Q75MP9 Q75MP9 EZH2 Histone-lysine N-methyltransferase EZH2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 705.0601 4 696.548505 2782.16491 73947.66 0.81415 0.00056709 -0.36503 -0.00025426 0.44912 0.00031283 696.79862558064 705.312128848656 62.504 0.30661 62.504 62.327 62.634 3.8147E-06 99 24 6 0 0 0 0.0010758 2 29150 32.146 32.146 1 1.1074 1.2411 0 18122000 7430800 10691000 1121 278 555 615 1766;1767 1766 DTEQYEREDFLIK 13 1 1 Unmodified _DTEQYEREDFLIK_ 0 0 0 1 B4DJV5;Q9BV37;Q53FW9;A0A024RBH5;Q13610;F8VZ56;Q86X79;Q05BL3;Q6PKI5;Q6PIN4 B4DJV5 B4DJV5 PWP1 Periodic tryptophan protein 1 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 843.4055 2 843.404492 1684.79443 68790.76 0.82636 0.00069695 -0.37683 -0.00031782 0.44953 0.00037913 843.404216232893 852.91687625938 106.41 0.49194 106.41 106.11 106.6 7.6294E-06 107 31 5 0 0 0 0.012015 1 61824 57.348 57.348 1 0.95 1.0641 0 17895000 8970200 8924600 1122 198 556 616 1768 1768 DTETENPPVENTLSPK 16 1 0 Phospho (STY) _DTETENPPVENTLS(ph)PK_ DTETENPPVENT(0.177)LS(0.823)PK DT(-51.77)ET(-52.14)ENPPVENT(-6.66)LS(6.66)PK 0 0 1 0 B2RBJ7;Q96RS0 B2RBJ7 B2RBJ7 TGS1 Trimethylguanosine synthase MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 929.9141 2 925.906411 1849.79827 65458.78 0.54322 0.00050297 0.053575 4.9605E-05 0.59679 0.00055257 925.906453700676 929.913293153202 71.889 0.46579 71.889 71.641 72.106 0 101 40 4 0 0 0 2.1369E-06 1 36077 76.332 60.792 4 1.5723 1.9273 0 20758000 8653700 12104000 1123 551 557 617 1769 1769 910 DTETENPPVENTLSPK 16 1 0 Phospho (STY) _DTETENPPVENTLS(ph)PK_ DTET(0.001)ENPPVENT(0.236)LS(0.763)PK DT(-35.66)ET(-29.14)ENPPVENT(-5.09)LS(5.09)PK 0 0 1 0 B2RBJ7;Q96RS0 B2RBJ7 B2RBJ7 TGS1 Trimethylguanosine synthase MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 925.9089 2 925.906411 1849.79827 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.677 1 71.677 71.177 72.177 0 0 0 0 0.00043724 1 36050 52.599 19.511 4 1124 551 557 617 1770 1770 910 DTFEHDPSESIDEFNK 16 1 0 Phospho (STY) _DTFEHDPS(ph)ESIDEFNK_ DTFEHDPS(0.587)ES(0.413)IDEFNK DT(-52.9)FEHDPS(1.52)ES(-1.52)IDEFNK 0 0 1 0 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09;E9PJA7 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 999.3982 2 995.391125 1988.7677 61148.04 0.48935 0.00048709 0.0079622 7.9255E-06 0.49731 0.00049502 995.391585144062 999.397997197803 85.477 1.2956 85.477 84.808 86.103 0 656 124 7 0 0 0 3.621E-43 4 46307 143.97 128.03 3 0.93444 1.1701 0 61377000 33923000 27454000 1125 809 558 618 1771;1772;1773;1774 1774 1392;1393 DTFEHDPSESIDEFNK 16 1 0 Phospho (STY) _DTFEHDPSES(ph)IDEFNK_ DTFEHDPS(0.257)ES(0.743)IDEFNK DT(-45.06)FEHDPS(-4.62)ES(4.62)IDEFNK 0 0 1 0 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09;E9PJA7 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 663.9298 3 663.929842 1988.7677 75033.45 0.82127 0.00054527 -0.24331 -0.00016154 0.57796 0.00038372 663.929666998009 666.60109579128 85.491 1.4569 85.491 84.756 86.213 0 546 139 5 0 0 0 4.5055E-05 2 45906 62.739 55.331 3 0.96944 1.2156 0 58489000 27072000 31418000 1126 809 558 618 1775;1776 1775 1392;1393 DTFEHDPSESIDEFNK 16 1 0 Phospho (STY) _DTFEHDPS(ph)ESIDEFNK_ DT(0.001)FEHDPS(0.5)ES(0.5)IDEFNK DT(-29.14)FEHDPS(0)ES(0)IDEFNK 0 0 1 0 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09;E9PJA7 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 995.3968 2 995.391125 1988.7677 65895.98 1.03 0.0010253 0.86844 0.00086444 1.8985 0.0018897 995.392604817633 999.898928273034 90.607 0.39999 90.607 90.353 90.753 0 90 34 5 0 0 0 0.00086486 1 49815 42.568 36.328 3 1.0773 1.3048 0 17350000 7866700 9483500 1127 809 558 618 1777 1777 1392;1393 DTFEHDPSESIDEFNK 16 1 0 Phospho (STY) _DTFEHDPS(ph)ESIDEFNK_ DTFEHDPS(0.518)ES(0.482)IDEFNK DT(-36.96)FEHDPS(0.31)ES(-0.31)IDEFNK 0 0 1 0 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09;E9PJA7 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 999.3991 2 995.391125 1988.7677 61857.3 0.28307 0.00028177 0.76836 0.00076482 1.0514 0.0010466 995.392552991255 999.398978690284 84.243 1.25 84.243 83.65 84.9 0 516 111 7 0 0 0 0.00012052 1 53948 57.788 41.845 3 1.6664 1.1129 0 27970000 11583000 16387000 1128 809 558 618 1778 1778 1392;1393 DTFEHDPSESIDEFNK 16 1 0 Unmodified _DTFEHDPSESIDEFNK_ 0 0 0 0 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09;E9PJA7 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 639.9478 3 637.274399 1908.80137 77761.38 1.0251 0.00065325 0.10693 6.8146E-05 1.132 0.0007214 637.274285356186 639.946415963252 94.257 0.54412 94.257 93.933 94.477 -7.6294E-06 134 47 5 0 0 0 1.0341E-09 1 52554 87.519 81.977 1 1.178 1.4768 0 27420000 13994000 13427000 1129 809 558 619 1779 1779 DTIIDVVGAPLTPNSR 16 0 1 Phospho (STY) _DTIIDVVGAPLT(ph)PNSR_ DTIIDVVGAPLT(0.851)PNS(0.149)R DT(-70.85)IIDVVGAPLT(7.56)PNS(-7.56)R 0 0 1 0 B4DQG8;Q9NPF5 B4DQG8 B4DQG8 DMAP1 DNA methyltransferase 1-associated protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 879.4392 2 874.434941 1746.85533 65906.13 0.6152 0.00053795 0.11135 9.7369E-05 0.72655 0.00063532 874.434988280797 879.439273110166 121.53 0.91168 121.53 121.11 122.02 0 435 69 9 0 0 0 1.1869E-08 3 73152 88.992 79.504 3 0.51902 0.6556 0 125870000 83403000 42463000 1130 651 559 620 1780;1781;1782 1781 2791 DTIIDVVGAPLTPNSR 16 0 1 Phospho (STY) _DTIIDVVGAPLT(ph)PNSR_ DTIIDVVGAPLT(0.849)PNS(0.151)R DT(-64.56)IIDVVGAPLT(7.49)PNS(-7.49)R 0 0 1 0 B4DQG8;Q9NPF5 B4DQG8 B4DQG8 DMAP1 DNA methyltransferase 1-associated protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 879.9431 2 874.434941 1746.85533 66010.42 0.92143 0.00080573 0.27105 0.00023702 1.1925 0.0010427 874.435080910537 879.439415376701 130.66 0.89812 130.66 130.24 131.14 0 606 85 10 0 0 0 4.4025E-08 2 84191 82.259 70.394 3 0.75912 0.51291 0 77280000 45836000 31445000 1131 651 559 620 1783;1784 1784 2791 DTLFCYHK 8 1 0 Unmodified _DTLFCYHK_ 0 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 542.2499 2 542.250034 1082.48552 NaN NaN NaN -0.090515 -4.9082E-05 NaN NaN NaN NaN 93.073 0.66506 93.073 92.893 93.558 0 0 0 0 0.011585 1 51691 75.854 13.39 1 NaN NaN 0 14781000 14781000 0 1132 1202;1038 560 621 1785 1785 DTLFCYHK 8 1 0 Unmodified _DTLFCYHK_ 0 0 0 0 Q05CW7;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 546.2583 2 542.250034 1082.48552 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.847 1 92.847 92.347 93.347 0 0 0 0 0.019845 1 51597 58.981 25.036 1 1133 1202;1038 560 621 1786 1786 DTLLSPDSSFEYVPPK 16 1 0 Phospho (STY) _DTLLSPDS(ph)SFEYVPPK_ DTLLS(0.005)PDS(0.458)S(0.458)FEY(0.08)VPPK DT(-55.37)LLS(-19.83)PDS(0)S(0)FEY(-7.56)VPPK 0 0 1 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 938.4293 2 937.926615 1873.83868 63520.03 0.88933 0.00083413 0.0018745 1.7582E-06 0.89121 0.00083589 937.926340637198 941.93391237772 117.34 1.1694 117.34 116.87 118.04 -7.6294E-06 538 105 7 0 0 0 1.3274E-06 3 70114 78.505 59.374 5 0.67878 0.85729 0 30964000 17889000 13075000 1134 944 561 622 1787;1788;1789 1788 1626;1627;1628 DTLLSPDSSFEYVPPK 16 1 0 Phospho (STY) _DTLLS(ph)PDSSFEYVPPK_ DTLLS(1)PDSSFEYVPPK DT(-69.05)LLS(53.43)PDS(-53.43)S(-67.45)FEY(-140.29)VPPK 0 0 1 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 941.9344 2 937.926615 1873.83868 62729.82 0.70404 0.00066034 0.10419 9.7727E-05 0.80824 0.00075807 937.926804001538 941.933757014554 121.52 2.1735 121.52 120.76 122.94 0 1294 166 12 0 0 0 5.3712E-102 5 73489 194.77 170.82 5 1.2027 1.4862 0 458200000 201720000 256490000 1135 944 561 622 1790;1791;1792;1793;1794 1792 1626;1627;1628 DTLLSPDSSFEYVPPK 16 1 0 Phospho (STY) _DTLLS(ph)PDSSFEYVPPK_ DTLLS(0.924)PDS(0.037)S(0.037)FEY(0.001)VPPK DT(-32.69)LLS(13.95)PDS(-13.95)S(-13.95)FEY(-29.26)VPPK 0 0 1 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 941.9345 2 937.926615 1873.83868 NaN NaN NaN NaN NaN NaN NaN NaN NaN 123.31 1 123.31 122.81 123.81 0 0 0 0 2.3541E-06 1 74636 68.044 55.212 5 1136 944 561 622 1795 1795 1626;1627;1628 DTLLSPDSSFEYVPPK 16 1 0 Phospho (STY) _DTLLS(ph)PDSSFEYVPPK_ DTLLS(1)PDSSFEYVPPK DT(-63.73)LLS(45.99)PDS(-45.99)S(-60.32)FEY(-136.4)VPPK 0 0 1 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 938.4292 2 937.926615 1873.83868 63411.48 0.83736 0.00078538 0.25625 0.00024035 1.0936 0.0010257 937.927242250831 941.93392418621 130.69 2.9458 130.69 129.78 132.72 0 2208 283 13 0 0 0 1.2765E-115 4 84110 198.87 180.45 5 1.8347 1.2238 0 556360000 193380000 362980000 1137 944 561 622 1796;1797;1798;1799 1797 1626;1627;1628 DTLLSPDSSFEYVPPK 16 1 0 2 Phospho (STY) _DTLLS(ph)PDSS(ph)FEYVPPK_ DTLLS(1)PDS(0.036)S(0.964)FEYVPPK DT(-68.75)LLS(68.75)PDS(-14.28)S(14.28)FEY(-61.35)VPPK 0 0 2 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 977.9164 2 977.90978 1953.80501 60637.93 0.78595 0.00076858 0.077374 7.5665E-05 0.86332 0.00084425 977.910051413688 981.916928640331 126.21 2.3656 126.21 125.24 127.61 0 1817 213 13 0 0 0 7.875E-101 5 76413 193.43 162.24 10 0.867 1.0698 0 910000000 486600000 423400000 1138 944 561 623 1800;1801;1802;1803;1804 1802 1626;1627;1628 DTLLSPDSSFEYVPPK 16 1 0 2 Phospho (STY) _DTLLS(ph)PDSS(ph)FEYVPPK_ DTLLS(1)PDS(0.248)S(0.75)FEY(0.002)VPPK DT(-35.62)LLS(35.62)PDS(-4.81)S(4.81)FEY(-25.27)VPPK 0 0 2 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 977.9106 2 977.90978 1953.80501 NaN NaN NaN NaN NaN NaN NaN NaN NaN 126.8 1 126.8 126.3 127.3 7.6294E-06 0 0 0 5.2755E-09 1 76913 118.21 95.735 10 1139 944 561 623 1805 1805 1626;1627;1628 DTLLSPDSSFEYVPPK 16 1 0 2 Phospho (STY) _DTLLS(ph)PDS(ph)SFEYVPPK_ DTLLS(1)PDS(0.86)S(0.14)FEYVPPK DT(-52.8)LLS(52.8)PDS(7.88)S(-7.88)FEY(-45.21)VPPK 0 0 2 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 981.9178 2 977.90978 1953.80501 62053.49 0.61635 0.00060273 0.14777 0.0001445 0.76412 0.00074724 977.909989467944 981.917070801781 134.84 0.19504 134.84 134.71 134.9 0 33 4 10 0 0 0 4.3674E-51 2 87107 149 125.78 10 1.5159 1.0135 0 135960000 55652000 80310000 1140 944 561 623 1806;1807 1806 1626;1627;1628 DTLLSPDSSFEYVPPKPK 18 2 0 Phospho (STY) _DTLLS(ph)PDSSFEYVPPKPK_ DT(0.005)LLS(0.98)PDS(0.008)S(0.008)FEYVPPKPK DT(-23.34)LLS(20.92)PDS(-20.92)S(-20.92)FEY(-43.45)VPPKPK 0 0 1 1 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1058.514 2 1050.50048 2098.9864 60077.77 0.42544 0.00044692 0.25455 0.0002674 0.67998 0.00071432 1051.00198857858 1058.51511854409 115.06 1.2872 115.06 114.45 115.74 0 629 111 7 0 0 0 1.8454E-08 2 68319 80.632 80.632 5 1.2289 1.5518 0 60654000 28046000 32609000 1141 944 562 624 1808;1809 1808 1626;1627;1628 DTLLSPDSSFEYVPPKPK 18 2 0 Phospho (STY) _DTLLS(ph)PDSSFEYVPPKPK_ DT(0.055)LLS(0.876)PDS(0.055)S(0.014)FEYVPPKPK DT(-12.03)LLS(12.03)PDS(-12.03)S(-17.9)FEY(-32.51)VPPKPK 0 0 1 1 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1051.0035 2 1050.50048 2098.9864 59328.64 0.83714 0.00087941 0.70493 0.00074053 1.5421 0.0016199 1051.00296977049 1058.51538331129 118.37 2.5281 118.37 117.62 120.15 0 1715 225 12 0 0 0 0.00023339 1 76499 43.454 38.139 5 1.8609 1.3635 0 473110000 165160000 307950000 1142 944 562 624 1810 1810 1626;1627;1628 DTLLSPDSSFEYVPPKPK 18 2 0 Phospho (STY) _DTLLS(ph)PDSSFEYVPPKPK_ DT(0.008)LLS(0.892)PDS(0.077)S(0.022)FEY(0.001)VPPKPK DT(-20.45)LLS(10.66)PDS(-10.66)S(-16.07)FEY(-29.61)VPPKPK 0 0 1 1 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 706.3474 3 700.669411 2098.9864 71921.03 1.1769 0.00082465 0.30457 0.00021341 1.4815 0.0010381 701.003901012333 706.012395167868 118.47 1.6984 118.47 117.74 119.44 0 1148 151 11 0 0 0 2.3283E-06 1 76512 58.712 49.893 5 1.9029 1.423 0 102630000 36497000 66137000 1143 944 562 624 1811 1811 1626;1627;1628 DTLLSPDSSFEYVPPKPK 18 2 0 2 Phospho (STY) _DTLLS(ph)PDS(ph)SFEYVPPKPK_ DT(0.003)LLS(0.997)PDS(0.636)S(0.364)FEYVPPKPK DT(-25.5)LLS(25.5)PDS(2.43)S(-2.43)FEY(-31.66)VPPKPK 0 0 2 1 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1098.4982 2 1090.48364 2178.95273 58596.35 0.45351 0.00049454 0.019165 2.0899E-05 0.47267 0.00051544 1090.98509725936 1098.49783454 116.21 1.8928 116.21 115.42 117.31 7.6294E-06 1373 169 11 0 0 0 1.6534E-17 2 69885 103.01 95.285 10 0.91155 1.211 0 368930000 198920000 170000000 1144 944 562 625 1812;1813 1813 1626;1627;1628 DTLLSPDSSFEYVPPKPK 18 2 0 2 Phospho (STY) _DTLLS(ph)PDS(ph)SFEYVPPKPK_ DT(0.018)LLS(0.93)PDS(0.52)S(0.519)FEY(0.013)VPPKPK DT(-17.37)LLS(9.69)PDS(0)S(0)FEY(-17.34)VPPKPK 0 0 2 1 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 727.6598 3 727.324855 2178.95273 71258.52 0.91417 0.0006649 -0.19617 -0.00014268 0.718 0.00052222 727.65901131034 732.667495515525 116.28 1.3944 116.28 115.62 117.01 0 532 124 9 0 0 0 1.851E-05 1 69631 52.026 52.026 10 0.89656 1.1295 0 55852000 31225000 24627000 1145 944 562 625 1814 1814 1626;1627;1628 DTLLSPDSSFEYVPPKPK 18 2 0 2 Phospho (STY) _DTLLS(ph)PDSS(ph)FEYVPPKPK_ DT(0.389)LLS(0.594)PDS(0.275)S(0.457)FEY(0.284)VPPKPK DT(-3.34)LLS(3.34)PDS(-3.37)S(3.34)FEY(-3.34)VPPKPK 0 0 2 1 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1090.9858 2 1090.48364 2178.95273 57609.63 0.74568 0.00081315 0.068608 7.4816E-05 0.81429 0.00088797 1090.98546441077 1098.49788858754 123.4 3.3849 123.4 122.26 125.64 0 2668 320 13 0 0 0 0.00025018 1 79810 42.149 36.995 10 1.6368 1.1882 0 945380000 353800000 591580000 1146 944 562 625 1815 1815 1626;1627;1628 DTLLSPDSSFEYVPPKPK 18 2 0 3 Phospho (STY) _DTLLS(ph)PDS(ph)S(ph)FEYVPPKPK_ DT(0.128)LLS(0.876)PDS(0.944)S(0.938)FEY(0.115)VPPKPK DT(-8.79)LLS(8.79)PDS(12.56)S(12.04)FEY(-12.04)VPPKPK 0 0 3 1 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1130.4674 2 1130.46681 2258.91906 56950 0.38749 0.00043805 0.14563 0.00016463 0.53313 0.00060268 1130.96836266944 1138.48124310795 123.87 2.3025 123.87 122.73 125.04 -7.6294E-06 1540 206 10 0 0 0 1.7519E-05 1 75384 50.653 43.703 10 0.72789 0.95668 0 251680000 145350000 106330000 1147 944 562 626 1816 1816 1626;1627;1628 DTLQTVSSSPVTEISR 16 0 1 Phospho (STY) _DTLQTVS(ph)SSPVTEISR_ DTLQT(0.005)VS(0.477)S(0.116)S(0.356)PVT(0.038)EIS(0.007)R DT(-33.84)LQT(-19.52)VS(1.27)S(-6.14)S(-1.27)PVT(-10.94)EIS(-18.53)R 0 0 1 0 Q5T3J3 Q5T3J3 Q5T3J3 LRIF1 Ligand-dependent nuclear receptor-interacting factor 1 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 900.4289 2 900.424771 1798.83499 63780.94 1.1163 0.0010051 0.066443 5.9827E-05 1.1827 0.0010649 900.424780063433 905.929929741628 93.816 0.7247 93.816 93.449 94.173 0 251 61 6 0 0 0 0.00018465 1 52119 69.602 69.602 7 0.4389 0.5528 0 54298000 39130000 15168000 1148 1103 563 627 1817 1817 2089;2090 DTLQTVSSSPVTEISR 16 0 1 Phospho (STY) _DTLQTVSSS(ph)PVTEISR_ DTLQTVS(0.001)S(0.062)S(0.873)PVT(0.062)EIS(0.001)R DT(-79.78)LQT(-52.67)VS(-30.42)S(-11.46)S(11.46)PVT(-11.46)EIS(-28.29)R 0 0 1 0 Q5T3J3 Q5T3J3 Q5T3J3 LRIF1 Ligand-dependent nuclear receptor-interacting factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 900.9279 2 900.424771 1798.83499 64929.63 1.2008 0.0010812 0.19927 0.00017943 1.4001 0.0012607 900.425280763511 905.428970962771 100.57 0.89022 100.57 100.1 100.99 -7.6294E-06 532 83 9 0 0 0 5.5618E-16 2 64623 104.26 97.125 7 1.2479 0.8438 0 74440000 34153000 40287000 1149 1103 563 627 1818;1819 1818 2089;2090 DTLVADNLDQATR 13 0 1 Unmodified _DTLVADNLDQATR_ 0 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 716.3578 2 716.357345 1430.70014 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.082 1 82.082 81.582 82.582 0 0 0 0 0.00010499 1 43810 113.63 87.245 1 1150 1220 564 628 1820 1820 DTLVADNLDQATR 13 0 1 Unmodified _DTLVADNLDQATR_ 0 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 721.3619 2 716.357345 1430.70014 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.117 1 82.117 81.617 82.617 0 0 0 0 0.00076395 1 43838 83.869 54.396 1 1151 1220 564 628 1821 1821 DTLVADNLDQATR 13 0 1 Unmodified _DTLVADNLDQATR_ 0 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 716.3586 2 716.357345 1430.70014 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.755 1 82.755 82.255 83.255 0 0 0 0 8.1977E-09 1 44266 127.87 96.437 1 1152 1220 564 628 1822 1822 DTLVADNLDQATR 13 0 1 Unmodified _DTLVADNLDQATR_ 0 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 716.3566 2 716.357345 1430.70014 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.845 1 82.845 82.345 83.345 0 0 0 0 0.00017495 1 44325 110.39 78.379 1 1153 1220 564 628 1823 1823 DTLVADNLDQATR 13 0 1 Unmodified _DTLVADNLDQATR_ 0 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 721.3615 2 716.357345 1430.70014 73002.07 1.1902 0.00085263 0.37341 0.0002675 1.5636 0.0011201 716.358391182523 721.361116960163 78.85 0.77699 78.85 78.55 79.327 7.6294E-06 298 74 6 0 0 0 3.5455E-06 2 50247 97.734 79.422 1 2.3533 1.7736 0 20204000 6743000 13461000 1154 1220 564 628 1824;1825 1824 DTLYEAVR 8 0 1 Unmodified _DTLYEAVR_ 0 0 0 0 P62906 P62906 P62906 RPL10A 60S ribosomal protein L10a MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 488.7537 2 483.748182 965.481811 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.982 1 75.982 75.482 76.482 7.6294E-06 0 0 0 0.026312 1 39256 46.994 12.17 1 1155 1020 565 629 1826 1826 DTNIDHGQPRPPSNR 15 0 2 Unmodified _DTNIDHGQPRPPSNR_ 0 0 0 1 B4DYZ9;A0A024R784;O15164 B4DYZ9 B4DYZ9 TRIM24 Transcription intermediary factor 1-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 568.9463 3 568.611791 1702.81354 78442.46 0.36746 0.00020894 -0.27038 -0.00015374 0.097078 5.5199E-05 568.611525902126 575.283885920602 66.791 0.59872 66.791 66.516 67.115 0 192 41 7 0 0 0 5.2724E-12 2 32608 104.41 84.033 1 1.0137 1.2604 0 74321000 33946000 40375000 1156 130 566 630 1827;1828 1827 DTPITHISFHPK 12 1 0 Unmodified _DTPITHISFHPK_ 0 0 0 0 H3BSH7;Q969X6;A0A0J9YXV4;A0A0J9YWK2;A0A0J9YWM9 H3BSH7 H3BSH7 CIRH1A Cirhin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 467.9198 3 464.91386 1391.71975 89620.45 0.22435 0.0001043 -0.14988 -6.9681E-05 0.074472 3.4623E-05 465.248089459252 467.585139485391 122.41 0.94714 122.41 122.01 122.96 -7.6294E-06 222 72 6 0 0 0 0.021711 1 73889 27.967 27.967 1 0.88822 1.0546 0 11212000 5551000 5660500 1157 871 567 631 1829 1829 DTPITHISFHPK 12 1 0 Unmodified _DTPITHISFHPK_ 0 0 0 0 H3BSH7;Q969X6;A0A0J9YXV4;A0A0J9YWK2;A0A0J9YWM9 H3BSH7 H3BSH7 CIRH1A Cirhin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 464.914 3 464.91386 1391.71975 91282.07 0.36437 0.0001694 -0.25525 -0.00011867 0.10912 5.0733E-05 464.913726077958 467.585263914162 124.22 0.28059 124.22 124.05 124.33 0 55 23 4 0 0 0 0.020764 1 75241 28.624 28.624 1 1.0286 1.2184 0 5151900 2575400 2576500 1158 871 567 631 1830 1830 DTSATTALELVAGER 15 0 1 Unmodified _DTSATTALELVAGER_ 0 0 0 0 B7ZLZ7;A0A024R158;O95347;Q05BV1;A8K984;Q2KQ72;B3KMB1 B7ZLZ7 B7ZLZ7 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 767.3939 2 767.391384 1532.76822 70436.11 0.74296 0.00057014 -0.32931 -0.00025271 0.41365 0.00031743 767.391642202908 772.39526588783 114.17 0.83765 114.17 113.8 114.64 -7.6294E-06 171 73 4 0 0 0 0.0034054 1 67789 62.14 54.861 1 1.3599 1.6527 0 20474000 8719900 11754000 1159 39 568 632 1831 1831 DTSSDPLLELR 11 0 1 Unmodified _DTSSDPLLELR_ 0 0 0 0 E9PS41;Q6RFH5;B4E018 E9PS41 E9PS41 WDR74 WD repeat-containing protein 74 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 628.3257 2 623.319699 1244.62485 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.12 1 109.12 108.62 109.62 0 0 0 0 0.014278 1 64110 45.137 25.35 1 1160 816 569 633 1832 1832 DTYDTSIDSLEENLDK 16 1 0 Phospho (STY) _DTYDTS(ph)IDSLEENLDK_ DTYDT(0.176)S(0.815)IDS(0.009)LEENLDK DT(-34.93)Y(-32.47)DT(-6.67)S(6.67)IDS(-19.67)LEENLDK 0 0 1 0 A0A1B0GUH9;A0PJI9;A0A1P0AZG4 A0A1B0GUH9 A0A1B0GUH9 C10orf12 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 969.9008 2 969.398616 1936.78268 61359.52 0.58712 0.00056916 0.12461 0.0001208 0.71173 0.00068995 969.398053699031 973.406627779865 111.03 0.50621 111.03 110.78 111.29 0 260 44 9 0 0 0 1.6102E-06 1 65635 77.746 77.746 5 0.93089 1.1817 0 40321000 20700000 19620000 1161 385 570 634 1833 1833 649;650;2707 DTYDTSIDSLEENLDK 16 1 0 Phospho (STY) _DTYDTSIDS(ph)LEENLDK_ DTYDT(0.001)S(0.079)IDS(0.92)LEENLDK DT(-57.18)Y(-56.44)DT(-31.01)S(-10.64)IDS(10.64)LEENLDK 0 0 1 0 A0A1B0GUH9;A0PJI9;A0A1P0AZG4 A0A1B0GUH9 A0A1B0GUH9 C10orf12 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 973.4052 2 969.398616 1936.78268 63531.96 0.66793 0.00064749 -0.14768 -0.00014316 0.52025 0.00050433 969.398919953229 973.405323875597 113.69 0.629 113.69 113.36 113.99 -7.6294E-06 287 55 7 0 0 0 4.9188E-09 1 67404 83.54 83.54 5 1.9225 2.4285 0 31049000 11959000 19090000 1162 385 570 634 1834 1834 649;650;2707 DTYDTSIDSLEENLDK 16 1 0 Phospho (STY) _DTYDTS(ph)IDSLEENLDK_ DTYDT(0.046)S(0.953)IDS(0.001)LEENLDK DT(-70.1)Y(-63.55)DT(-13.2)S(13.2)IDS(-29.48)LEENLDK 0 0 1 0 A0A1B0GUH9;A0PJI9;A0A1P0AZG4 A0A1B0GUH9 A0A1B0GUH9 C10orf12 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 973.4064 2 969.398616 1936.78268 60575.93 0.81806 0.00079302 0.18906 0.00018327 1.0071 0.0009763 969.900784900261 973.405782435149 119.4 0.68549 119.4 119.03 119.71 7.6294E-06 374 60 9 0 0 0 2.1102E-22 3 76888 117 105.52 5 3.0282 1.9905 0 55729000 14185000 41544000 1163 385 570 634 1835;1836;1837 1836 649;650;2707 DTYDTSIDSLEENLDK 16 1 0 Phospho (STY) _DTYDTSIDS(ph)LEENLDK_ DTYDTS(0.004)IDS(0.996)LEENLDK DT(-70.03)Y(-69.37)DT(-36.69)S(-24.34)IDS(24.34)LEENLDK 0 0 1 0 A0A1B0GUH9;A0PJI9;A0A1P0AZG4 A0A1B0GUH9 A0A1B0GUH9 C10orf12 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 973.4067 2 969.398616 1936.78268 62071.53 0.77669 0.00075292 0.36756 0.00035631 1.1443 0.0011092 969.39870023219 973.406075037233 122.16 0.64987 122.16 121.85 122.5 0 327 59 7 0 0 0 5.6646E-12 1 78870 97.235 97.235 5 3.9764 2.6494 0 101760000 18214000 83545000 1164 385 570 634 1838 1838 649;650;2707 DTYDTSIDSLEENLDK 16 1 0 2 Phospho (STY) _DTYDTS(ph)IDS(ph)LEENLDK_ DTY(0.001)DT(0.11)S(0.903)IDS(0.986)LEENLDK DT(-46.35)Y(-29.22)DT(-9.67)S(9.67)IDS(18)LEENLDK 0 0 2 0 A0A1B0GUH9;A0PJI9;A0A1P0AZG4 A0A1B0GUH9 A0A1B0GUH9 C10orf12 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1013.8911 2 1009.38178 2016.74901 61487.41 0.21989 0.00022195 0.046093 4.6525E-05 0.26598 0.00026847 1009.38174495389 1013.38897585587 115.56 0.82269 115.56 115.12 115.95 0 423 70 9 0 0 0 3.8376E-10 2 68735 90.653 84.811 10 1.3447 1.6782 0 68971000 29433000 39538000 1165 385 570 635 1839;1840 1839 649;650;2707 DTYDTSIDSLEENLDK 16 1 0 2 Phospho (STY) _DTYDT(ph)SIDS(ph)LEENLDK_ DT(0.014)Y(0.011)DT(0.495)S(0.495)IDS(0.985)LEENLDK DT(-16.39)Y(-18.32)DT(0)S(0)IDS(16.98)LEENLDK 0 0 2 0 A0A1B0GUH9;A0PJI9;A0A1P0AZG4 A0A1B0GUH9 A0A1B0GUH9 C10orf12 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1013.3885 2 1009.38178 2016.74901 60664.64 0.28737 0.00029007 0.59929 0.00060491 0.88666 0.00089498 1009.38246510433 1013.38952283566 126.43 0.92857 126.43 126.05 126.98 0 544 85 11 0 0 0 0.001027 1 81490 40.693 40.693 10 3.2078 2.1432 0 209600000 50661000 158940000 1166 385 570 635 1841 1841 649;650;2707 DVAEVDTVRR 10 0 2 Unmodified _DVAEVDTVRR_ 0 0 0 1 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 580.2946 2 580.306926 1158.5993 81992.14 0.47828 0.00027755 0.21251 0.00012332 0.69079 0.00040087 580.306989457761 590.315225483104 66.72 0.22847 66.72 66.612 66.84 0 38 15 4 0 0 0 0.016743 1 32625 36.447 36.447 1 2.3328 2.8441 0 20666000 7864000 12802000 1167 1070 571 636 1842 1842 DVDIIDHHDNTYTVK 15 1 0 Unmodified _DVDIIDHHDNTYTVK_ 0 0 0 0 Q5HY54;Q60FE6;Q60FE5;P21333;A6NDY9;A0A087WWY3 Q5HY54 Q5HY54 FLNA Filamin-A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 598.2901 3 595.619841 1783.83769 79766.71 0.77915 0.00046408 -0.66231 -0.00039448 0.11684 6.9594E-05 595.619763849986 598.290691585003 106.45 0.89487 106.45 105.87 106.77 -7.6294E-06 237 61 6 0 0 0 0.0094962 1 62145 28.089 23.541 1 1.9111 2.3504 0 22484000 8152100 14332000 1168 973 572 637 1843 1843 DVEGSTSPQIGDK 13 1 0 Phospho (STY) _DVEGSTS(ph)PQIGDK_ DVEGS(0.003)T(0.139)S(0.858)PQIGDK DVEGS(-23.97)T(-7.91)S(7.91)PQIGDK 0 0 1 0 Q9UG93;E9PLT0;Q96L66;Q9GZV0;A0A024R0K2;A0A024R0E2;O75534 Q9UG93 Q9UG93 DKFZp586J0620;CSDE1;UNR Cold shock domain-containing protein E1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 710.8079 2 706.800686 1411.58682 73640.5 0.91252 0.00064497 -0.34451 -0.0002435 0.56801 0.00040147 706.799207519106 710.807780785054 45.974 0.80185 45.974 45.567 46.369 0 170 58 5 0 0 0 1.5055E-06 1 17296 96.464 87.951 3 1.8421 2.1818 0 5016300 2199900 2816400 1169 26 573 638 1844 1844 32 DVEHYVGSDK 10 1 0 Unmodified _DVEHYVGSDK_ 0 0 0 0 Q9UPP1;H0Y3N9 Q9UPP1 Q9UPP1 PHF8 Histone lysine demethylase PHF8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 578.7718 2 574.76456 1147.51457 83080.55 0.36774 0.00021137 -0.32807 -0.00018856 0.039672 2.2802E-05 574.764520634149 578.77166803748 66 0.18365 66 65.903 66.086 0 48 14 5 0 0 0 1.7197E-05 1 31971 109.66 71.936 1 0.91411 1.1229 0 21909000 13344000 8565300 1170 1243 574 639 1845 1845 DVESPSWR 8 0 1 Phospho (STY) _DVES(ph)PSWR_ DVES(0.984)PS(0.016)WR DVES(17.87)PS(-17.87)WR 0 0 1 0 B7Z9C0;D3DTH7;F5H6E2;B7Z3E5;O00159 B7Z9C0 B7Z9C0 MYO1C Unconventional myosin-Ic MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 533.2177 2 528.213321 1054.41209 84033.25 0.58894 0.00031109 0.21053 0.0001112 0.79947 0.00042229 528.213337824433 533.217618015402 60.363 1.9528 60.363 59.374 61.327 0 656 142 7 0 0 0 0.0038837 4 27708 113.62 97.993 2 0.94921 1.1989 0 118630000 60476000 58158000 1171 704 575 640 1846;1847;1848;1849 1849 1162 DVESPSWR 8 0 1 Phospho (STY) _DVES(ph)PSWR_ DVES(0.996)PS(0.004)WR DVES(24.34)PS(-24.34)WR 0 0 1 0 B7Z9C0;D3DTH7;F5H6E2;B7Z3E5;O00159 B7Z9C0 B7Z9C0 MYO1C Unconventional myosin-Ic MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 528.2133 2 528.213321 1054.41209 83345.69 0.94066 0.00049687 -0.26436 -0.00013964 0.6763 0.00035723 528.213123275687 533.217246708123 54.138 1.1574 54.138 53.575 54.733 0 467 99 6 0 0 0 0.0061822 4 32748 78.098 68.627 2 1.6751 1.2031 0 28168000 10689000 17479000 1172 704 575 640 1850;1851;1852;1853 1851 1162 DVESYIHR 8 0 1 Unmodified _DVESYIHR_ 0 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 514.7556 2 509.751256 1017.48796 84916.12 0.32126 0.00016376 0.31618 0.00016117 0.63743 0.00032493 509.751486205409 514.755387014769 78.026 1.5384 78.026 77.273 78.811 0 527 139 5 0 0 0 0.016484 4 40468 91.906 53.67 1 1.1695 1.4766 0 94670000 43285000 51385000 1173 1214 576 641 1854;1855;1856;1857 1855 DVFASEVTPSDLQK 14 1 0 Phospho (STY) _DVFASEVT(ph)PSDLQK_ DVFASEVT(0.667)PS(0.333)DLQK DVFAS(-91.62)EVT(3.01)PS(-3.01)DLQK 0 0 1 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 808.3685 2 808.366193 1614.71783 67554.92 1.8446 0.0014911 0.32522 0.00026289 2.1698 0.001754 808.366558693697 812.373688774647 100.43 1.2207 100.43 99.838 101.06 0 610 93 8 0 0 0 6.3899E-88 4 57319 186.29 174.08 3 0.67208 0.83202 0 198240000 113250000 84992000 1174 1170 577 642 1858;1859;1860;1861 1859 2972 DVFASEVTPSDLQK 14 1 0 Phospho (STY) _DVFASEVT(ph)PSDLQK_ DVFASEVT(0.974)PS(0.026)DLQK DVFAS(-113.87)EVT(15.68)PS(-15.68)DLQK 0 0 1 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 808.3668 2 808.366193 1614.71783 67196.12 1.2512 0.0010114 -0.080953 -6.544E-05 1.1702 0.00094597 808.366380746087 812.373193869513 107.71 1.564 107.71 107.12 108.68 0 962 152 9 0 0 0 3.4702E-232 3 69515 259.68 242.46 3 1.6517 1.1027 0 334650000 127850000 206810000 1175 1170 577 642 1862;1863;1864 1864 2972 DVFRDPALK 9 1 1 Unmodified _DVFRDPALK_ 0 0 0 1 E4W6B6;B2R4D8;A0A024R1V4;K7ELC7;P61353;K7EQQ9;Q6LCU2 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 530.7926 2 530.792924 1059.57129 83381.89 0.67705 0.00035937 0.17611 9.348E-05 0.85316 0.00045285 530.792880626007 539.804402916471 95.012 0.62062 95.012 94.779 95.4 0 153 51 5 0 0 0 9.1867E-05 1 53205 100.02 62.459 1 0.9488 1.1285 0 73969000 39600000 34369000 1176 53 578 643 1865 1865 DVFRDPALK 9 1 1 Unmodified _DVFRDPALK_ 0 0 0 1 E4W6B6;B2R4D8;A0A024R1V4;K7ELC7;P61353;K7EQQ9;Q6LCU2 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 539.8054 2 530.792924 1059.57129 83268.91 0.83196 0.0004416 0.21403 0.00011361 1.046 0.00055521 530.792990934332 539.804191322064 95.458 1.0196 95.458 95.125 96.145 0 272 91 4 0 0 0 9.3268E-05 2 53707 101.65 73.472 1 0.7976 0.94648 0 61803000 31053000 30750000 1177 53 578 643 1866;1867 1866 DVFRDPALK 9 1 1 Unmodified _DVFRDPALK_ 0 0 0 1 E4W6B6;B2R4D8;A0A024R1V4;K7ELC7;P61353;K7EQQ9;Q6LCU2 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 530.7934 2 530.792924 1059.57129 83268.93 1.0344 0.00054907 0.34015 0.00018055 1.3746 0.00072962 530.793028192722 539.804324200656 96.805 1.0866 96.805 96.294 97.38 0 247 89 4 0 0 0 0.00015359 1 54944 105.52 61.074 1 0.80019 0.9487 0 57656000 36702000 20954000 1178 53 578 643 1868 1868 DVFRDPALK 9 1 1 Unmodified _DVFRDPALK_ 0 0 0 1 E4W6B6;B2R4D8;A0A024R1V4;K7ELC7;P61353;K7EQQ9;Q6LCU2 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 530.7932 2 530.792924 1059.57129 NaN NaN NaN -0.44452 -0.00023595 NaN NaN NaN NaN 96.234 0.4304 96.234 95.979 96.409 0 0 0 0 0.0029041 1 54338 77.732 41.852 1 NaN NaN 0 18689000 18689000 0 1179 53 578 643 1869 1869 DVFRDPALK 9 1 1 Unmodified _DVFRDPALK_ 0 0 0 1 E4W6B6;B2R4D8;A0A024R1V4;K7ELC7;P61353;K7EQQ9;Q6LCU2 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 539.8048 2 530.792924 1059.57129 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.33 1 96.33 95.83 96.83 0 0 0 0 0.0076697 1 54273 74.92 17.639 1 1180 53 578 643 1870 1870 DVFYYSPSGK 10 1 0 Phospho (STY) _DVFYYS(ph)PSGK_ DVFYYS(0.796)PS(0.204)GK DVFY(-48.85)Y(-41.78)S(5.92)PS(-5.92)GK 0 0 1 0 O95983 O95983 O95983 MBD3 Methyl-CpG-binding domain protein 3 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 621.758 2 621.757562 1241.50057 NaN NaN NaN 0.22367 0.00013907 NaN NaN NaN NaN 87.899 1.3034 87.899 87.533 88.836 0 0 0 0 0.00045953 2 47991 75.739 49.066 4 NaN NaN 0 11326000 11326000 0 1181 952 579 644 1871;1872 1871 1651 DVFYYSPSGK 10 1 0 Phospho (STY) _DVFYYS(ph)PSGK_ DVFYY(0.001)S(0.904)PS(0.095)GK DVFY(-37.02)Y(-30.14)S(9.77)PS(-9.77)GK 0 0 1 0 O95983 O95983 O95983 MBD3 Methyl-CpG-binding domain protein 3 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 621.7585 2 621.757562 1241.50057 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.584 1 87.584 87.084 88.084 0 0 0 0 0.0017216 1 47657 68.44 46.354 4 1182 952 579 644 1873 1873 1651 DVFYYSPSGK 10 1 0 Phospho (STY) _DVFYYS(ph)PSGK_ DVFYY(0.001)S(0.913)PS(0.086)GK DVFY(-40.61)Y(-32.53)S(10.25)PS(-10.25)GK 0 0 1 0 O95983 O95983 O95983 MBD3 Methyl-CpG-binding domain protein 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 625.7647 2 621.757562 1241.50057 78531.55 1.0615 0.00065998 0.0072381 4.5004E-06 1.0687 0.00066448 621.757481523515 625.764565543677 91.222 1.1058 91.222 90.685 91.791 0 449 105 6 0 0 0 0.0012888 3 58566 78.692 63.541 4 2.1677 1.6554 0 17539000 6064200 11475000 1183 952 579 644 1874;1875;1876 1875 1651 DVFYYSPSGKK 11 2 0 Phospho (STY) _DVFYYS(ph)PSGKK_ DVFY(0.008)Y(0.029)S(0.761)PS(0.202)GKK DVFY(-19.59)Y(-14.26)S(5.76)PS(-5.76)GKK 0 0 1 1 O95983 O95983 O95983 MBD3 Methyl-CpG-binding domain protein 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 693.8201 2 685.805043 1369.59553 73717.81 1.03 0.00070638 0.43853 0.00030074 1.4685 0.0010071 685.804830401088 693.819293982152 69.765 1.2276 69.765 68.981 70.209 -7.6294E-06 292 104 4 0 0 0 0.0057999 1 43904 46.481 41.868 4 2.0874 1.6424 0 10248000 3465100 6782400 1184 952 580 645 1877 1877 1651 DVHEDSLTVVFENNWQPER 19 0 1 Unmodified _DVHEDSLTVVFENNWQPER_ 0 0 0 0 B4DXZ6;A0A0F7L1S3;A0A0F7KYT8;P51114;C9JAJ4;A0A0F7L0Q8 B4DXZ6 B4DXZ6 FXR1 Fragile X mental retardation syndrome-related protein 1 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 772.3636 3 772.029339 2313.06619 77486.37 0.99631 0.00076918 -0.35387 -0.0002732 0.64243 0.00049598 772.363261525997 775.699768892738 133.45 0.15448 133.45 133.33 133.49 0 23 7 6 0 0 0 2.0543E-05 1 81265 48.907 40.915 1 0.4687 0.51405 0 7192100 4599900 2592200 1185 338 581 646 1878 1878 DVIEEHGPSEK 11 1 0 Unmodified _DVIEEHGPSEK_ 0 0 0 0 B4DXZ6;A0A0F7L1S3;A0A0F7KYT8;P51114;H7C4S4;B4DM78 B4DXZ6 B4DXZ6 FXR1 Fragile X mental retardation syndrome-related protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 620.2964 2 620.296224 1238.5779 77422.05 0.75009 0.00046528 0.34802 0.00021588 1.0981 0.00068116 620.296375277842 624.303281738253 63.849 0.19328 63.849 63.762 63.956 0 45 13 5 0 0 0 2.2418E-08 2 30185 113.93 53.49 1 1.2866 1.6251 0 31002000 14276000 16725000 1186 338 582 647 1879;1880 1880 DVLDVYIEHR 10 0 1 Unmodified _DVLDVYIEHR_ 0 0 0 0 A0A0S2Z441;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993 A0A0S2Z441 A0A0S2Z441 MCM7 DNA helicase;DNA replication licensing factor MCM7 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 634.8294 2 629.824952 1257.63535 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.95 1 110.95 110.45 111.45 0 0 0 0 0.0011701 1 65573 96.331 65.258 1 1187 348 583 648 1881 1881 DVLLQVDDERR 11 0 2 Unmodified _DVLLQVDDERR_ 0 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 679.3575 2 679.357148 1356.69974 NaN NaN NaN 0.28534 0.00019384 NaN NaN NaN NaN 93.93 0.47662 93.93 93.719 94.195 0 0 0 0 1.3304E-22 1 52475 128.91 90.819 1 NaN NaN 0 14727000 14727000 0 1188 49 584 649 1882 1882 DVLSVAFSSDNR 12 0 1 Unmodified _DVLSVAFSSDNR_ 0 0 0 0 D6RAU2;E9PD14;D6RFX4;D6RFZ9;H0YAF8;B4DVD2;D6RHH4;D6R9Z1;H0YAM7;J3KPE3;H0Y8W2;D6R9L0;E9KL35;P63244 D6RAU2 D6RAU2 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 655.3242 2 655.322773 1308.63099 76738.39 1.1387 0.00074624 -0.024169 -1.5839E-05 1.1146 0.0007304 655.322583048703 660.326974631409 105.52 1.09 105.52 104.96 106.05 7.6294E-06 287 74 6 0 0 0 0.023868 1 60890 69.979 64.671 1 1.7142 2.1083 0 26008000 8914000 17094000 1189 666 585 650 1883 1883 DVLSVAFSSDNR 12 0 1 Unmodified _DVLSVAFSSDNR_ 0 0 0 0 D6RAU2;E9PD14;D6RFX4;D6RFZ9;H0YAF8;B4DVD2;D6RHH4;D6R9Z1;H0YAM7;J3KPE3;H0Y8W2;D6R9L0;E9KL35;P63244 D6RAU2 D6RAU2 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 660.3272 2 655.322773 1308.63099 77029.76 1.2541 0.00082184 -0.25621 -0.0001679 0.99789 0.00065394 655.322551180455 660.326335298574 105.42 0.86154 105.42 104.91 105.77 0 184 77 4 0 0 0 0.031489 1 67510 50.284 44.743 1 2.1855 1.7852 0 6453200 2253300 4200000 1190 666 585 650 1884 1884 DVMASAALAAEPSPLPGSLIR 21 0 1 Oxidation (M),Phospho (STY) _DVM(ox)ASAALAAEPS(ph)PLPGSLIR_ DVM(1)ASAALAAEPSPLPGSLIR DVMASAALAAEPS(0.927)PLPGS(0.073)LIR DVM(68.24)ASAALAAEPSPLPGSLIR DVMAS(-52.26)AALAAEPS(11.07)PLPGS(-11.07)LIR 0 1 1 0 Q5TBI2;Q8NDD1;B4E0F7;Q5TBH9 Q5TBI2 Q5TBI2 C1orf131 Uncharacterized protein C1orf131 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1082.032 2 1081.53179 2161.04902 59351.1 0.41995 0.00045419 -0.33388 -0.0003611 0.086068 9.3085E-05 1081.53212676538 1087.03680411386 123.86 0.75361 123.86 123.49 124.25 -7.6294E-06 439 66 10 0 0 0 1.7662E-12 1 74876 68.243 68.243 3 0.74145 0.93306 0 48239000 26673000 21566000 1191 1106 586 651 1885 1885 313 2093;2094 DVMASAALAAEPSPLPGSLIR 21 0 1 Oxidation (M),2 Phospho (STY) _DVM(ox)ASAALAAEPS(ph)PLPGS(ph)LIR_ DVM(1)ASAALAAEPSPLPGSLIR DVMASAALAAEPS(1)PLPGS(1)LIR DVM(59.28)ASAALAAEPSPLPGSLIR DVMAS(-40.51)AALAAEPS(40.51)PLPGS(54.65)LIR 0 1 2 0 Q5TBI2;Q8NDD1;B4E0F7;Q5TBH9 Q5TBI2 Q5TBI2 C1orf131 Uncharacterized protein C1orf131 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1121.5153 2 1121.51495 2241.01535 57726.96 0.58073 0.0006513 0.49676 0.00055712 1.0775 0.0012084 1122.01699787354 1126.52115890207 127.49 0.55624 127.49 127.21 127.77 7.6294E-06 262 51 6 0 0 0 4.9418E-09 2 77254 59.281 53.438 3 0.80005 0.93538 0 13250000 7185000 6065100 1192 1106 586 652 1886;1887 1886 313 2093;2094 DVMLENSR 8 0 1 Oxidation (M),Phospho (STY) _DVM(ox)LENS(ph)R_ DVM(1)LENSR DVMLENS(1)R DVM(49.42)LENSR DVMLENS(49.42)R 0 1 1 0 M0QXN8;M0R0V4;Q8NC26 M0QXN8 M0QXN8 ZNF114 Zinc finger protein 114 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 535.2148 2 530.212464 1058.41038 85259.67 0.27063 0.00014349 -3.027 -0.0016049 -2.7564 -0.0014615 530.210719162715 535.214999865498 53.712 1.2783 53.712 52.852 54.13 -3.8147E-06 207 105 4 0 0 0 0.019492 1 22560 49.418 39.004 1 1.826 2.0134 0 7981300 2561900 5419300 1193 909 587 653 1888 1888 249 1535 DVPPDILLDSPERK 14 1 1 Phospho (STY) _DVPPDILLDS(ph)PERK_ DVPPDILLDS(1)PERK DVPPDILLDS(112.5)PERK 0 0 1 1 Q6IEH8;Q6KC79;A8K2T2;A6QL62 Q6IEH8 Q6IEH8 NIPBL Nipped-B-like protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 837.9131 2 837.410935 1672.80732 67294.24 1.043 0.00087345 -0.061302 -5.1335E-05 0.98174 0.00082212 837.410861257662 846.422173724276 105.54 1.5195 105.54 104.82 106.34 0 491 103 7 0 0 0 7.3672E-18 3 61350 112.5 92.739 1 0.49479 0.58374 0 44954000 29553000 15401000 1194 1118 588 654 1889;1890;1891 1891 2120 DVPPDILLDSPERK 14 1 1 Phospho (STY) _DVPPDILLDS(ph)PERK_ DVPPDILLDS(1)PERK DVPPDILLDS(79.84)PERK 0 0 1 1 Q6IEH8;Q6KC79;A8K2T2;A6QL62 Q6IEH8 Q6IEH8 NIPBL Nipped-B-like protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 837.4122 2 837.410935 1672.80732 67299.48 1.1246 0.00094174 0.088368 7.4E-05 1.213 0.0010157 837.411108886963 846.422180675125 105.41 2.1095 105.41 104.48 106.59 0 1090 200 8 0 0 0 2.498E-05 1 67698 79.837 53.898 1 1.38 1.0641 0 51340000 22332000 29007000 1195 1118 588 654 1892 1892 2120 DVQGWGENDR 10 0 1 Unmodified _DVQGWGENDR_ 0 0 0 0 E9PMD7;A0A140VJS9;B3KXM2;P62136;B7ZB67;B4DJ75;V9HW04;P62140 E9PMD7 E9PMD7 PPP1CA;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 593.2625 2 588.257434 1174.50031 81292.08 0.5874 0.00034554 0.16214 9.5382E-05 0.74954 0.00044093 588.257378853774 593.261669929351 58.864 1.0084 58.864 58.229 59.237 3.8147E-06 235 79 4 0 0 0 0.0063498 3 26064 73.985 41.63 1 0.93869 1.1128 0 14928000 8268000 6659700 1196 378 589 655 1893;1894;1895 1895 DVQSPGFLNEPLSSK 15 1 0 Phospho (STY) _DVQS(ph)PGFLNEPLSSK_ DVQS(1)PGFLNEPLSSK DVQS(46.78)PGFLNEPLS(-46.78)S(-52.45)K 0 0 1 0 E9PPJ1;Q8NG31;H0YCZ2 E9PPJ1 E9PPJ1 CASC5 Protein CASC5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 853.4003 2 849.392742 1696.77093 64954.83 0.75929 0.00064493 -0.53658 -0.00045577 0.2227 0.00018916 849.392413629935 853.398998194449 106.46 0.94051 106.46 105.96 106.9 0 305 67 6 0 0 0 0.00032609 2 61690 70.197 57.43 3 0.73965 0.93892 0 40313000 23194000 17119000 1197 814 590 656 1896;1897 1897 1404 DVQSPGFLNEPLSSK 15 1 0 Phospho (STY) _DVQS(ph)PGFLNEPLSSK_ DVQS(0.997)PGFLNEPLS(0.002)S(0.002)K DVQS(27.52)PGFLNEPLS(-28.11)S(-27.52)K 0 0 1 0 E9PPJ1;Q8NG31;H0YCZ2 E9PPJ1 E9PPJ1 CASC5 Protein CASC5 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 849.3928 2 849.392742 1696.77093 66160.55 1.2135 0.0010307 -0.058983 -5.01E-05 1.1545 0.00098065 849.39242837092 853.399757141359 113.2 0.89484 113.2 112.73 113.63 -7.6294E-06 462 83 8 0 0 0 0.0013865 1 72796 45.618 32.85 3 1.1289 0.73385 0 38175000 17816000 20358000 1198 814 590 656 1898 1898 1404 DVTEAEQAEEQAR 13 0 1 Unmodified _DVTEAEQAEEQAR_ 0 0 0 0 A0JLS5;J3KNP2;Q12788 A0JLS5 A0JLS5 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 743.3395 2 738.334066 1474.65358 71282.5 1.0794 0.00079695 -0.88981 -0.00065698 0.18959 0.00013998 738.835352583913 743.33793614407 34.611 0.82742 34.611 34.101 34.928 0 185 67 5 0 0 0 0.0045177 1 19155 71.153 56.463 1 1.7049 1.355 0 13053000 3614400 9439000 1199 397 591 657 1899 1899 DVTNFTVGGFAPMSPR 16 0 1 Oxidation (M),Phospho (STY) _DVTNFTVGGFAPM(ox)S(ph)PR_ DVTNFTVGGFAPM(1)SPR DVTNFTVGGFAPMS(1)PR DVTNFTVGGFAPM(67.46)SPR DVT(-49.59)NFT(-36.14)VGGFAPMS(36.14)PR 0 1 1 0 B4DJK4;B4E0Q4;B4DZJ7;O00267 B4DJK4 B4DJK4 SUPT5H Transcription elongation factor SPT5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 901.3978 2 896.392219 1790.76989 64374.54 0.99471 0.00089165 -0.019369 -1.7362E-05 0.97534 0.00087428 896.392218892447 901.396411006049 112.98 0.75873 112.98 112.6 113.36 0 505 72 9 0 0 0 4.9388E-05 2 66839 67.456 58.943 3 2.1312 2.6902 0 85333000 26471000 58862000 1200 628 592 658 1900;1901 1900 160 1037 DVTNFTVGGFAPMSPR 16 0 1 Oxidation (M),Phospho (STY) _DVTNFTVGGFAPM(ox)S(ph)PR_ DVTNFTVGGFAPM(1)SPR DVTNFTVGGFAPMS(1)PR DVTNFTVGGFAPM(70.41)SPR DVT(-53.98)NFT(-33.82)VGGFAPMS(33.82)PR 0 1 1 0 B4DJK4;B4E0Q4;B4DZJ7;O00267 B4DJK4 B4DJK4 SUPT5H Transcription elongation factor SPT5 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 901.8994 2 896.392219 1790.76989 NaN NaN NaN -0.39183 -0.00035124 NaN NaN NaN NaN 120.62 0.67339 120.62 120.35 121.02 0 0 0 0 1.429E-06 2 77876 70.412 50.305 3 NaN NaN 0 12061000 0 12061000 1201 628 592 658 1902;1903 1902 160 1037 DVTPPPETEVVLIK 14 1 0 Phospho (STY) _DVT(ph)PPPETEVVLIK_ DVT(1)PPPETEVVLIK DVT(35.39)PPPET(-35.39)EVVLIK 0 0 1 0 E7EVA0;P27816;B4DM10;A0A024R2V2;A0A024R2S1 E7EVA0 E7EVA0 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 808.9114 2 808.912779 1615.81101 68168.4 0.84921 0.00068694 0.045128 3.6505E-05 0.89434 0.00072344 808.912724456061 812.919978527836 115.96 0.87282 115.96 115.54 116.41 7.6294E-06 488 79 8 0 0 0 0.022439 1 69040 50.088 39.258 2 0.81418 1.0124 0 85193000 46564000 38629000 1202 793 593 659 1904 1904 2825 DVTVLSVAEEQDLLK 15 1 0 Phospho (STY) _DVTVLS(ph)VAEEQDLLK_ DVT(0.002)VLS(0.998)VAEEQDLLK DVT(-27.45)VLS(27.45)VAEEQDLLK 0 0 1 0 Q14966;A0A096LPK8;Q57Z90 Q14966 Q14966 ZNF638;NP220 Zinc finger protein 638 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 873.9383 2 869.929158 1737.84376 65533.68 0.76466 0.0006652 -0.052791 -4.5925E-05 0.71187 0.00061927 870.430358850896 873.936515041137 130.7 0.34872 130.7 130.47 130.82 0 85 33 4 0 0 0 0.0012112 1 79427 51.643 35.845 2 0.62538 0.74148 0 6640800 3666800 2974000 1203 1066 594 660 1905 1905 2005 DVVLSTSPK 9 1 0 Phospho (STY) _DVVLST(ph)SPK_ DVVLS(0.091)T(0.743)S(0.166)PK DVVLS(-9.13)T(6.5)S(-6.5)PK 0 0 1 0 A0A075B784;A0A024R8V6;Q9P275;B3KMW2 A0A075B784 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 513.2496 2 513.249373 1024.48419 85847.74 0.26173 0.00013433 0.23781 0.00012206 0.49954 0.00025639 513.249375953366 517.256564594154 64.801 1.4988 64.801 63.939 65.438 0 381 107 5 0 0 0 0.00037686 2 30562 97.813 73.783 3 1.0279 1.2781 0 85396000 40511000 44885000 1204 157 595 661 1906;1907 1906 241;2647 DVVLSTSPK 9 1 0 Phospho (STY) _DVVLSTS(ph)PK_ DVVLS(0.013)T(0.066)S(0.921)PK DVVLS(-18.53)T(-11.44)S(11.44)PK 0 0 1 0 A0A075B784;A0A024R8V6;Q9P275;B3KMW2 A0A075B784 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1025.4271 1 1025.49147 1024.48419 61920.77 0.40929 0.00041972 0.46794 0.00047987 0.87723 0.00089959 1025.49224181973 1033.50578134606 64.608 0.87926 64.608 64.2 65.079 0 142 63 4 0 0 0 0.013955 1 30873 45.829 37.904 3 1.143 1.391 0 18226000 8550400 9675800 1205 157 595 661 1908 1908 241;2647 DVVLSTSPK 9 1 0 Phospho (STY) _DVVLSTS(ph)PK_ DVVLS(0.028)T(0.05)S(0.922)PK DVVLS(-15.15)T(-12.63)S(12.63)PK 0 0 1 0 A0A075B784;A0A024R8V6;Q9P275;B3KMW2 A0A075B784 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 513.2495 2 513.249373 1024.48419 84294.2 0.7778 0.00039921 -0.30293 -0.00015548 0.47487 0.00024373 513.249222480821 517.256214726113 59.817 1.7924 59.817 59.017 60.81 0 992 169 8 0 0 0 3.3652E-05 5 37049 100.69 72.478 3 1.3448 0.89889 0 162690000 69007000 93681000 1206 157 595 661 1909;1910;1911;1912;1913 1912 241;2647 DVVSSLRR 8 0 2 Phospho (STY) _DVVS(ph)SLRR_ DVVS(0.5)S(0.5)LRR DVVS(0)S(0)LRR 0 0 1 1 A8MV53;A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;C9JHF7;C9J3W3 A8MV53 A8MV53 PPAN;PPAN-P2RY11 Suppressor of SWI4 1 homolog MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 506.253 2 506.252781 1010.49101 87012.18 0.51192 0.00025916 0.083024 4.2031E-05 0.59494 0.00030119 506.252788095761 516.261039667081 36.008 0.56875 36.008 35.768 36.336 0 136 44 5 0 0 0 0.011633 1 20209 44.863 26.191 2 0.37211 0.32911 0 8415800 5852700 2563100 1207 303 596 662 1914 1914 486;487 DVYLSPR 7 0 1 Phospho (STY) _DVYLS(ph)PR_ DVYLS(1)PR DVY(-56.33)LS(56.33)PR 0 0 1 0 H0Y6E7;H3BT71;B4E352;P38159;Q2VIN3;Q96E39;B3KRG5;H3BUY5 H0Y6E7 H0Y6E7 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 465.2102 2 465.21005 928.405548 88746.2 0.14711 6.8436E-05 0.072699 3.382E-05 0.21981 0.00010226 465.210038740813 470.214120201297 65.547 2.241 65.547 64.484 66.725 0 814 166 8 0 0 0 0.017265 4 31190 86.136 19.785 2 0.91039 1.1527 0 473430000 250430000 223000000 1208 684 597 663 1915;1916;1917;1918 1916 1128 DVYLSPR 7 0 1 Phospho (STY) _DVYLS(ph)PR_ DVYLS(1)PR DVY(-40.2)LS(40.2)PR 0 0 1 0 H0Y6E7;H3BT71;B4E352;P38159;Q2VIN3;Q96E39;B3KRG5;H3BUY5 H0Y6E7 H0Y6E7 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 465.2102 2 465.21005 928.405548 88469.33 0.70809 0.00032941 -0.367 -0.00017073 0.34109 0.00015868 465.209935283285 470.213927979338 58.802 2.6036 58.802 58.085 60.689 0 1314 244 9 0 0 0 0.026989 1 36875 63.216 14.422 2 0.52152 0.33962 0 483010000 313880000 169130000 1209 684 597 663 1919 1919 1128 DVYLSPR 7 0 1 Phospho (STY) _DVYLS(ph)PR_ DVY(0.02)LS(0.98)PR DVY(-16.79)LS(16.79)PR 0 0 1 0 H0Y6E7;H3BT71;B4E352;P38159;Q2VIN3;Q96E39;B3KRG5;H3BUY5 H0Y6E7 H0Y6E7 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 470.2145 2 465.21005 928.405548 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.564 1 60.564 60.064 61.064 0 0 0 0 0.029568 1 37512 44.318 13.028 2 1210 684 597 663 1920 1920 1128 DVYLSPR 7 0 1 Phospho (STY) _DVYLS(ph)PR_ DVY(0.005)LS(0.995)PR DVY(-22.98)LS(22.98)PR 0 0 1 0 H0Y6E7;H3BT71;B4E352;P38159;Q2VIN3;Q96E39;B3KRG5;H3BUY5 H0Y6E7 H0Y6E7 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 465.2098 2 465.21005 928.405548 NaN NaN NaN NaN NaN NaN NaN NaN NaN 61.187 1 61.187 60.687 61.687 -3.8147E-06 0 0 0 0.028344 1 37933 46.001 12.624 2 1211 684 597 663 1921 1921 1128 DVYLSPRDDGYSTK 14 1 1 Phospho (STY) _DVYLS(ph)PRDDGYSTK_ DVYLS(1)PRDDGYSTK DVY(-63.38)LS(51.81)PRDDGY(-70.81)S(-51.81)T(-66.76)K 0 0 1 1 H0Y6E7;H3BT71;B4E352;P38159;Q2VIN3;Q96E39;B3KRG5;H3BUY5 H0Y6E7 H0Y6E7 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 857.3798 2 848.366725 1694.7189 65428.78 0.614 0.0005209 -0.039619 -3.3611E-05 0.57438 0.00048729 848.366541027244 857.378222198061 74.244 1.1359 74.244 73.764 74.9 7.6294E-06 382 97 6 0 0 0 6.5365E-12 1 38199 102.65 75.68 5 0.98727 1.168 0 49070000 22870000 26200000 1212 684 598 664 1922 1922 1128 DVYLSPRDDGYSTK 14 1 1 Phospho (STY) _DVYLS(ph)PRDDGYSTK_ DVYLS(1)PRDDGYSTK DVY(-65.01)LS(48.07)PRDDGY(-77)S(-48.07)T(-69.36)K 0 0 1 1 H0Y6E7;H3BT71;B4E352;P38159;Q2VIN3;Q96E39;B3KRG5;H3BUY5 H0Y6E7 H0Y6E7 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 848.3681 2 848.366725 1694.7189 65860.48 1.143 0.0009697 -0.046475 -3.9428E-05 1.0965 0.00093027 848.36665253744 857.377939802405 67.121 2.7225 67.121 65.673 68.395 0 1546 244 11 0 0 0 5.5547E-12 3 42193 103.79 81.736 5 0.5442 0.42119 0 455790000 300240000 155540000 1213 684 598 664 1923;1924;1925 1925 1128 DVYLSPRDDGYSTK 14 1 1 Phospho (STY) _DVYLS(ph)PRDDGYSTK_ DVY(0.001)LS(0.968)PRDDGY(0.001)S(0.024)T(0.006)K DVY(-30.62)LS(16)PRDDGY(-31.13)S(-16)T(-22.26)K 0 0 1 1 H0Y6E7;H3BT71;B4E352;P38159;Q2VIN3;Q96E39;B3KRG5;H3BUY5 H0Y6E7 H0Y6E7 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 565.9138 3 565.913575 1694.7189 80690.58 0.74299 0.00042047 0.23693 0.00013408 0.97992 0.00055455 565.913629673853 571.92119810972 67.098 1.7321 67.098 66.267 67.999 0 877 156 9 0 0 0 0.0010096 1 42210 58.712 35.855 5 0.54951 0.42424 0 106540000 72080000 34460000 1214 684 598 664 1926 1926 1128 DWDELEEEARK 11 1 1 Unmodified _DWDELEEEARK_ 0 0 0 1 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 719.3355 2 710.32297 1418.63139 73406.43 1.1265 0.00080017 0.16699 0.00011862 1.2935 0.00091879 710.323186112244 719.334244989962 93.745 0.95144 93.745 93.368 94.319 -7.6294E-06 209 80 5 0 0 0 1.1155E-14 2 52223 138.11 138.11 1 0.67288 0.78281 0 30749000 16903000 13846000 1215 1254 599 665 1927;1928 1928 DYAFVHFEDR 10 0 1 Unmodified _DYAFVHFEDR_ 0 0 0 0 B4DMD1;B4DT28;B4DMB1;Q0VGD6;Q6MZS5;B2R7W4;O43390 B4DMD1 B4DMD1 HNRNPR;HNRPR;DKFZp686A13234 Heterogeneous nuclear ribonucleoprotein R MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 655.2997 2 649.793652 1297.57275 79103.93 0.83433 0.00054215 -0.23934 -0.00015552 0.59499 0.00038662 649.793358853017 654.797669966373 111.13 0.39014 111.13 110.9 111.29 0 78 34 4 0 0 0 0.00075026 2 65718 89.247 77.021 1 1.2158 1.3772 0 10885000 3840900 7043900 1216 538 600 666 1929;1930 1929 DYAFVHMEK 9 1 0 Oxidation (M) _DYAFVHM(ox)EK_ DYAFVHM(1)EK DYAFVHM(51.07)EK 0 1 0 0 A0A0S2Z4Z0;Q96PK6;A0A0S2Z567 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 578.2609 2 578.260599 1154.50665 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.802 1 78.802 78.302 79.302 0 0 0 0 0.010426 1 41373 51.066 33.081 1 1217 354 601 667 1931 1931 84 DYFEEYGK 8 1 0 Unmodified _DYFEEYGK_ 0 0 0 0 I6L957;A0A087WUI2;A0A024RA28;P22626 I6L957 I6L957 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 530.2332 2 525.724372 1049.43419 NaN NaN NaN -0.35479 -0.00018652 NaN NaN NaN NaN 75.866 0.70246 75.866 75.625 76.328 0 0 0 0 0.022796 1 39087 52.403 14 1 NaN NaN 0 10427000 0 10427000 1218 177 602 668 1932 1932 DYFEQYGK 8 1 0 Unmodified _DYFEQYGK_ 0 0 0 0 F8W6I7;A0A024RC46;A0A024RB53;A0A024RAZ7;P09651;F8VTQ5;F8VZ49;Q9BSM5;Q0VAC0;F8VYN5;A0A024QZ98;Q32P51 F8W6I7 F8W6I7 HNRNPA1;hCG_2020860;HNRPA1;RP11-78J21.1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 529.2399 2 525.232364 1048.45018 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.855 1 73.855 73.355 74.355 -7.6294E-06 0 0 0 0.020477 1 37725 60.76 50.622 1 1219 188 603 669 1933 1933 DYGNSPLHR 9 0 1 Phospho (STY) _DYGNS(ph)PLHR_ DYGNS(1)PLHR DY(-50.48)GNS(50.48)PLHR 0 0 1 0 A0A087WUW5;K7ELW5;A0A0D9SF20;A6NLN1;A0A0U1RRM4;P26599 A0A087WUW5 A0A087WUW5 PTBP1 Polypyrimidine tract-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 569.738 2 569.737495 1137.46044 81770.81 0.53175 0.00030296 0.048563 2.7668E-05 0.58032 0.00033063 569.737355196178 574.741549220149 49 1.2465 49 48.467 49.714 0 236 94 5 0 0 0 0.00069646 2 19388 78.655 68.668 2 2.227 2.495 0 9958300 2862100 7096200 1220 249 604 670 1934;1935 1934 395 DYLLSESEDEGDNDGER 17 0 1 2 Phospho (STY) _DYLLS(ph)ES(ph)EDEGDNDGER_ DY(0.003)LLS(0.998)ES(0.999)EDEGDNDGER DY(-26.14)LLS(26.14)ES(32.94)EDEGDNDGER 0 0 2 0 Q9BVJ6;O60531 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1051.8595 2 1051.8592 2101.70385 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.455 1 86.455 85.955 86.955 0 0 0 0 5.5015E-06 1 46848 65.563 59.146 3 1221 1199 605 671 1936 1936 2380;2381 DYLLSESEDEGDNDGER 17 0 1 2 Phospho (STY) _DYLLS(ph)ES(ph)EDEGDNDGER_ DYLLS(1)ES(1)EDEGDNDGER DY(-61.26)LLS(62.77)ES(61.26)EDEGDNDGER 0 0 2 0 Q9BVJ6;O60531 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1051.8604 2 1051.8592 2101.70385 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.215 1 87.215 86.715 87.715 0 0 0 0 5.2869E-13 1 47380 123.4 109.73 3 1222 1199 605 671 1937 1937 2380;2381 DYLLSESEDEGDNDGERK 18 1 1 2 Phospho (STY) _DYLLS(ph)ES(ph)EDEGDNDGERK_ DYLLS(1)ES(1)EDEGDNDGERK DY(-52.02)LLS(52.02)ES(67.25)EDEGDNDGERK 0 0 2 1 Q9BVJ6;O60531 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1124.9175 2 1115.90668 2229.79881 NaN NaN NaN -0.083168 -9.2807E-05 NaN NaN NaN NaN 76.168 2.0762 76.168 75.267 77.343 0 0 0 0 2.6324E-16 3 39884 104.2 90.289 3 NaN NaN 0 323660000 0 323660000 1223 1199 606 672 1938;1939;1940 1939 2380;2381 DYLLSESEDEGDNDGERK 18 1 1 2 Phospho (STY) _DYLLS(ph)ES(ph)EDEGDNDGERK_ DY(0.003)LLS(0.998)ES(0.998)EDEGDNDGERK DY(-27.73)LLS(27.73)ES(27.73)EDEGDNDGERK 0 0 2 1 Q9BVJ6;O60531 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1115.9056 2 1115.90668 2229.79881 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.466 1 75.466 74.966 75.966 0 0 0 0 0.0003781 1 38858 54.7 40.794 3 1224 1199 606 672 1941 1941 2380;2381 DYLLSESEDEGDNDGERK 18 1 1 Phospho (STY) _DYLLS(ph)ESEDEGDNDGERK_ DY(0.002)LLS(0.939)ES(0.06)EDEGDNDGERK DY(-27.21)LLS(11.96)ES(-11.96)EDEGDNDGERK 0 0 1 1 Q9BVJ6;O60531 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1084.9348 2 1075.92352 2149.83248 NaN NaN NaN -0.095246 -0.00010248 NaN NaN NaN NaN 77.36 0.73353 77.36 77.012 77.746 0 0 0 0 0.0010846 1 40242 46.892 39.483 3 NaN NaN 0 15435000 0 15435000 1225 1199 606 673 1942 1942 2380;2381 DYLLSESEDEGDNDGERK 18 1 1 Phospho (STY) _DYLLSES(ph)EDEGDNDGERK_ DY(0.001)LLS(0.336)ES(0.663)EDEGDNDGERK DY(-27.26)LLS(-2.95)ES(2.95)EDEGDNDGERK 0 0 1 1 Q9BVJ6;O60531 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1084.9332 2 1075.92352 2149.83248 58060.14 0.80118 0.00086201 -0.025128 -2.7036E-05 0.77606 0.00083498 1076.42389194642 1084.93316904882 66.049 1.4593 66.049 65.589 67.048 0 752 134 9 0 0 0 6.3196E-05 1 41230 46.543 34.75 3 1.7879 1.3792 0 68140000 21398000 46742000 1226 1199 606 673 1943 1943 2380;2381 DYQELMNTK 9 1 0 Oxidation (M) _DYQELM(ox)NTK_ DYQELM(1)NTK DYQELM(69.72)NTK 0 1 0 0 H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;CON__P04264;CON__ENSEMBL:ENSBTAP00000038253;H6VRG2 H6VRG3;H6VRG2 H6VRG2 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 579.2614 2 579.260796 1156.50704 NaN NaN NaN 0.28711 0.00016631 NaN NaN NaN NaN 51.045 0.93452 51.045 50.833 51.768 0 0 0 0 0.0071598 1 20675 69.716 41.609 1 NaN NaN 0 2745800 2745800 0 + 1227 876;877 607 674 1944 1944 236 DYVFIEFCVEDSK 13 1 0 Unmodified _DYVFIEFCVEDSK_ 0 0 0 0 B4DDC6;A0A024RB32;A0A087WYT3;B3KUY2;Q15185 B4DDC6 B4DDC6 PTGES3 Prostaglandin E synthase 3 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 829.8793 2 825.871439 1649.72832 NaN NaN NaN -0.45368 -0.00037468 NaN NaN NaN NaN 133.27 0.098633 133.27 133.21 133.31 0 0 0 0 3.5236E-24 1 81095 122.51 97.074 1 NaN NaN 0 5716300 0 5716300 1228 191 608 675 1945 1945 EAAAGIQWSEEETEDEEEEK 20 1 0 Phospho (STY) _EAAAGIQWS(ph)EEETEDEEEEK_ EAAAGIQWS(0.993)EEET(0.007)EDEEEEK EAAAGIQWS(21.3)EEET(-21.3)EDEEEEK 0 0 1 0 P46087;F5H5X6;F5GYR3 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1199.4731 2 1194.96558 2387.91661 55810.18 -0.093 -0.00011113 0.329 0.00039315 0.236 0.00028202 1195.46723313885 1198.97305531957 83.525 1.343 83.525 82.935 84.278 0 740 123 7 0 0 0 2.5828E-47 4 44993 136.26 130.97 2 0.88995 1.1036 0 120130000 62646000 57482000 1229 995 609 676 1946;1947;1948;1949 1948 1797 EAADLDAVPMSLSYEELVR 19 0 1 Oxidation (M),Phospho (STY) _EAADLDAVPM(ox)SLS(ph)YEELVR_ EAADLDAVPM(1)SLSYEELVR EAADLDAVPMS(0.04)LS(0.933)Y(0.027)EELVR EAADLDAVPM(121.03)SLSYEELVR EAADLDAVPMS(-13.64)LS(13.64)Y(-15.37)EELVR 0 1 1 0 A0A0A6YYG7;Q6IBW4;H0YC55 A0A0A6YYG7 A0A0A6YYG7 NCAPH2 Condensin-2 complex subunit H2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1102.9973 2 1102.49507 2202.97558 57551.78 0.41136 0.00045352 -0.75114 -0.00082813 -0.33978 -0.00037461 1102.99492874603 1108.00060741331 122.19 1.6058 122.19 121.23 122.84 0 778 120 10 0 0 0 1.9109E-36 1 73895 121.03 107.07 3 1.0741 1.3591 0 325280000 154250000 171030000 1230 301 610 677 1950 1950 72 482;483 EAADLDAVPMSLSYEELVR 19 0 1 Oxidation (M),2 Phospho (STY) _EAADLDAVPM(ox)S(ph)LS(ph)YEELVR_ EAADLDAVPM(1)SLSYEELVR EAADLDAVPMS(0.876)LS(0.876)Y(0.248)EELVR EAADLDAVPM(78.9)SLSYEELVR EAADLDAVPMS(7.82)LS(7.82)Y(-7.82)EELVR 0 1 2 0 A0A0A6YYG7;Q6IBW4;H0YC55 A0A0A6YYG7 A0A0A6YYG7 NCAPH2 Condensin-2 complex subunit H2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1147.483 2 1142.47823 2282.94191 NaN NaN NaN -1.252 -0.0014303 NaN NaN NaN NaN 127.81 1.2089 127.81 127.15 128.35 -7.6294E-06 0 0 0 1.5266E-12 1 77584 78.903 54.109 3 NaN NaN 0 35435000 0 35435000 1231 301 610 678 1951 1951 72 482;483 EAAVSASDILQESAIHSPGTVEK 23 1 0 Phospho (STY) _EAAVSASDILQESAIHS(ph)PGTVEK_ EAAVSASDILQES(0.001)AIHS(0.865)PGT(0.134)VEK EAAVS(-60.01)AS(-42.23)DILQES(-27.83)AIHS(8.11)PGT(-8.11)VEK 0 0 1 0 E7ENF1;G5EA44;F5H7W8;Q96C57;F5H3K2;B4DWJ9;F5H8B7 E7ENF1 E7ENF1 C12orf43 Uncharacterized protein C12orf43 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 809.7229 3 807.051131 2418.13156 67614.43 1.0203 0.0008234 -0.074608 -6.0212E-05 0.94565 0.00076319 807.385398174947 810.056808414184 105.9 0.78355 105.9 105.61 106.39 -7.6294E-06 250 52 7 0 0 0 6.0078E-25 1 61404 97.295 85.554 5 0.81302 1.0114 0 79659000 46647000 33011000 1232 788 611 679 1952 1952 1329 EADDDEEVDDNIPEMPSPK 19 1 0 Oxidation (M),Phospho (STY) _EADDDEEVDDNIPEM(ox)PS(ph)PK_ EADDDEEVDDNIPEM(1)PSPK EADDDEEVDDNIPEMPS(1)PK EADDDEEVDDNIPEM(97.46)PSPK EADDDEEVDDNIPEMPS(97.46)PK 0 1 1 0 Q59FP7;A0A024R7E3;P26358;I6L9H2 Q59FP7 Q59FP7 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1121.427 2 1120.92487 2239.83518 57972.95 0.25752 0.00028866 -0.099087 -0.00011107 0.15843 0.00017759 1121.4262381936 1124.9321568963 70.846 1.079 70.846 70.179 71.258 0 708 105 9 0 0 0 1.3051E-17 3 35532 97.463 92.079 1 0.5589 0.69537 0 78702000 47033000 31669000 1233 133 612 680 1953;1954;1955 1954 27 198 EADDDEEVDDNIPEMPSPK 19 1 0 Oxidation (M),Phospho (STY) _EADDDEEVDDNIPEM(ox)PS(ph)PK_ EADDDEEVDDNIPEM(1)PSPK EADDDEEVDDNIPEMPS(1)PK EADDDEEVDDNIPEM(57.11)PSPK EADDDEEVDDNIPEMPS(57.11)PK 0 1 1 0 Q59FP7;A0A024R7E3;P26358;I6L9H2 Q59FP7 Q59FP7 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1120.9265 2 1120.92487 2239.83518 58162.05 0.62658 0.00070235 -0.25446 -0.00028523 0.37212 0.00041712 1121.42621120851 1124.93170862603 74.173 0.59583 74.173 73.909 74.504 0 274 50 6 0 0 0 8.0189E-07 1 47155 57.106 51.613 1 0.75619 0.50209 0 81912000 43576000 38336000 1234 133 612 680 1956 1956 27 198 EADDDEEVDDNIPEMPSPKK 20 2 0 Oxidation (M),Phospho (STY) _EADDDEEVDDNIPEM(ox)PS(ph)PKK_ EADDDEEVDDNIPEM(1)PSPKK EADDDEEVDDNIPEMPS(1)PKK EADDDEEVDDNIPEM(88.09)PSPKK EADDDEEVDDNIPEMPS(88.09)PKK 0 1 1 1 Q59FP7;A0A024R7E3;P26358;I6L9H2 Q59FP7 Q59FP7 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1184.9736 2 1184.97235 2367.93015 54631.34 0.64309 0.00076204 -0.12935 -0.00015328 0.51374 0.00060876 1185.47363563752 1192.98650109578 57.193 1.6118 57.193 56.553 58.165 3.8147E-06 907 141 9 0 0 0 7.9145E-14 1 35361 88.092 88.092 1 0.74932 0.56391 0 63882000 35493000 28389000 1235 133 613 681 1957 1957 27 198 EADGSETPEPFAAEAK 16 1 0 Phospho (STY) _EADGSET(ph)PEPFAAEAK_ EADGS(0.097)ET(0.903)PEPFAAEAK EADGS(-9.69)ET(9.69)PEPFAAEAK 0 0 1 0 B2R5U1;B4E299;B3KU67;A0A140VK49;Q59FF0;I6TRR8;Q7KZF4 B2R5U1 B2R5U1 SND1 Staphylococcal nuclease domain-containing protein 1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 869.3618 2 864.853647 1727.69274 NaN NaN NaN -0.038963 -3.3698E-05 NaN NaN NaN NaN 73.438 0.58366 73.438 73.073 73.656 0 0 0 0 0.00015476 2 37267 54.7 41.037 2 NaN NaN 0 14729000 0 14729000 1236 382 614 682 1958;1959 1959 2698 EADLVFISVNTPTK 14 1 0 Phospho (STY) _EADLVFIS(ph)VNTPTK_ EADLVFIS(0.333)VNT(0.333)PT(0.333)K EADLVFIS(0)VNT(0)PT(0)K 0 0 1 0 E7ER83;E7ETF4;E7EV97;O60701 E7ER83 E7ER83 UGDH UDP-glucose 6-dehydrogenase MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 811.4018 2 807.394754 1612.77495 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.02 1 121.02 120.52 121.52 -7.6294E-06 0 0 0 0.0079035 1 72990 41.399 12.442 3 1237 790 615 683 1960 1960 1332;2819;2820 EAEKVEEER 9 1 1 Unmodified _EAEKVEEER_ 0 0 0 1 D3DSU2 D3DSU2 D3DSU2 HMBOX1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 568.7789 2 559.769842 1117.52513 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.44 1 60.44 59.94 60.94 0 0 0 0 0.0011266 1 27491 82.452 57.558 1 1238 766 616 684 1961 1961 EAELLTSAEK 10 1 0 Phospho (STY) _EAELLTS(ph)AEK_ EAELLT(0.235)S(0.765)AEK EAELLT(-5.12)S(5.12)AEK 0 0 1 0 O60566 O60566 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 585.7686 2 585.768126 1169.5217 NaN NaN NaN 0.73791 0.00043224 NaN NaN NaN NaN 59.814 0.64132 59.814 59.429 60.07 0 0 0 0 0.01493 1 36911 50.786 27.037 2 NaN NaN 0 2646600 2646600 0 1239 930 617 685 1962 1962 1578 EAFLVLSDEEDISGEK 16 1 0 Phospho (STY) _EAFLVLS(ph)DEEDISGEK_ EAFLVLS(1)DEEDISGEK EAFLVLS(44.75)DEEDIS(-44.75)GEK 0 0 1 0 A8MV73;B4DRL6;B4E2A2;B3KQF8;A0A024RAY1;Q6VMQ6 A8MV73 A8MV73 ATF7IP Activating transcription factor 7-interacting protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 934.9178 2 930.911162 1859.80777 63790.58 0.90115 0.00083889 -0.12601 -0.0001173 0.77514 0.00072159 930.91117541637 934.917888910411 117.87 0.50424 117.87 117.66 118.16 0 145 45 5 0 0 0 6.9393E-13 2 70627 100.41 76.321 2 0.75457 0.89524 0 10914000 6101800 4811800 1240 185 618 686 1963;1964 1963 293 EAGELPTSPLHLLSPGTPR 19 0 1 2 Phospho (STY) _EAGELPTS(ph)PLHLLS(ph)PGTPR_ EAGELPT(0.164)S(0.836)PLHLLS(0.992)PGT(0.008)PR EAGELPT(-7.09)S(7.09)PLHLLS(21.07)PGT(-21.07)PR 0 0 2 0 B3KPJ8;A0A0S2Z5X6;Q969R5;H7C228;A0A0S2Z5Q2 B3KPJ8 B3KPJ8 L3MBTL2 Lethal(3)malignant brain tumor-like protein 2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1066.9974 2 1066.49488 2130.9752 NaN NaN NaN 0.40634 0.00043336 NaN NaN NaN NaN 127.91 0.64773 127.91 127.5 128.15 -7.6294E-06 0 0 0 1.3822E-15 1 77593 87.676 65.917 6 NaN NaN 0 26219000 26219000 0 1241 363 619 687 1965 1965 569;570 EAGENAPVLSDDELVSMSVR 20 0 1 Oxidation (M),Phospho (STY) _EAGENAPVLS(ph)DDELVSM(ox)SVR_ EAGENAPVLSDDELVSM(1)SVR EAGENAPVLS(1)DDELVSMSVR EAGENAPVLSDDELVSM(117.74)SVR EAGENAPVLS(50.87)DDELVS(-50.87)MS(-57.71)VR 0 1 1 0 A0A024R804;A8WFP5;O60675 A0A024R804 A0A024R804 MAFK Transcription factor MafK MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1112.9908 2 1107.48523 2212.95591 57012.11 0.41618 0.00046091 -0.10326 -0.00011436 0.31292 0.00034655 1107.98675633758 1112.99101130453 106.81 1.1432 106.81 106.41 107.55 7.6294E-06 649 92 11 0 0 0 3.354E-29 2 62072 117.74 106.8 3 1.7979 2.2751 0 352500000 135150000 217350000 1242 144 620 688 1966;1967 1966 31 217 EAGFGGGPNATITTSLK 17 1 0 Phospho (STY) _EAGFGGGPNATITT(ph)SLK_ EAGFGGGPNAT(0.002)IT(0.141)T(0.428)S(0.428)LK EAGFGGGPNAT(-23.14)IT(-4.82)T(0)S(0)LK 0 0 1 0 P07199 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 854.9038 2 850.898192 1699.78183 66642.02 0.92493 0.00078702 0.43764 0.00037239 1.3626 0.0011594 850.898797174952 854.90565342187 95.461 0.70603 95.461 95.115 95.821 0 285 64 6 0 0 0 0.0016526 1 53861 47.64 40.747 4 0.93848 1.1907 0 37897000 21854000 16043000 1243 958 621 689 1968 1968 1675;2869;2870;2871 EAGFGGGPNATITTSLK 17 1 0 3 Phospho (STY) _EAGFGGGPNAT(ph)IT(ph)TS(ph)LK_ EAGFGGGPNAT(0.994)IT(0.786)T(0.353)S(0.867)LK EAGFGGGPNAT(20.32)IT(4.8)T(-4.8)S(6.88)LK 0 0 3 0 P07199 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 930.8658 2 930.864522 1859.71449 65903.99 1.4418 0.0013421 0.51818 0.00048236 1.9599 0.0018244 930.864874817294 934.872432672094 102.17 0.54149 102.17 101.94 102.48 0 125 42 5 0 0 0 0.00027301 1 58814 42.226 31.3 4 1.0535 1.2523 0 11587000 4942100 6645400 1244 958 621 690 1969 1969 1675;2869;2870;2871 EAHEPLAVADAK 12 1 0 Unmodified _EAHEPLAVADAK_ 0 0 0 0 B3KN82;Q9Y2X3;B4DUY3 B3KN82 B3KN82 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 625.8231 2 625.822409 1249.63027 79085.88 0.82707 0.0005176 -0.27151 -0.00016992 0.55556 0.00034768 625.822200874787 629.829267850815 80.117 0.91125 80.117 79.542 80.454 0 222 84 4 0 0 0 1.1566E-24 2 42082 140.49 115.35 1 0.84259 1.0688 0 37117000 21932000 15185000 1245 578 622 691 1970;1971 1970 EAHEPLAVADAK 12 1 0 Unmodified _EAHEPLAVADAK_ 0 0 0 0 B3KN82;Q9Y2X3;B4DUY3 B3KN82 B3KN82 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 417.5513 3 417.550698 1249.63027 93182.7 0.2266 9.4618E-05 -0.07914 -3.3045E-05 0.14746 6.1573E-05 417.55064894344 420.222059871767 80.025 0.90066 80.025 79.573 80.473 0 274 83 6 0 0 0 6.1401E-05 3 42315 69.815 56.226 1 0.81712 1.0277 0 52698000 31261000 21437000 1246 578 622 691 1972;1973;1974 1973 EAIEGTYIDK 10 1 0 Unmodified _EAIEGTYIDK_ 0 0 0 0 M0QZC5;P62280 M0QZC5 M0QZC5 RPS11 40S ribosomal protein S11 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 573.7922 2 569.784961 1137.55537 85176.45 0.37472 0.00021351 0.14192 8.0865E-05 0.51665 0.00029438 569.785219819912 573.79208755984 71.333 0.4838 71.333 71.176 71.66 0 110 46 4 0 0 0 0.030717 1 35721 54.416 54.416 1 0.75344 0.9042 0 14937000 7268900 7668300 1247 911 623 692 1975 1975 EAIEGTYIDK 10 1 0 Unmodified _EAIEGTYIDK_ 0 0 0 0 M0QZC5;P62280 M0QZC5 M0QZC5 RPS11 40S ribosomal protein S11 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 573.793 2 569.784961 1137.55537 NaN NaN NaN 0.12184 6.9422E-05 NaN NaN NaN NaN 54.39 0.77716 54.39 53.885 54.662 0 0 0 0 0.020327 1 33119 55.461 16.499 1 NaN NaN 0 1524100 0 1524100 1248 911 623 692 1976 1976 EALRVSEPK 9 1 1 Phospho (STY) _EALRVS(ph)EPK_ EALRVS(1)EPK EALRVS(78.83)EPK 0 0 1 1 B7ZAX9;B4DZC0;O60264;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;D7EZH4 B7ZAX9 B7ZAX9 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 563.7854 2 554.773546 1107.53254 80508.01 0.75493 0.00041882 0.41514 0.00023031 1.1701 0.00064913 554.773619504397 563.784663183107 64.112 0.74188 64.112 63.742 64.484 7.6294E-06 175 52 6 0 0 0 0.00052728 1 30238 78.83 53.356 1 9.3696 11.182 0 95813000 8108400 87704000 1249 672 624 693 1977 1977 1117 EANFTVSSMHGDMPQK 16 1 0 2 Oxidation (M) _EANFTVSSM(ox)HGDM(ox)PQK_ EANFTVSSM(1)HGDM(1)PQK EANFTVSSM(41.09)HGDM(41.09)PQK 0 2 0 0 A0A024R8W0;P38919 A0A024R8W0 A0A024R8W0 DDX48;EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 606.9363 3 604.262671 1809.76618 NaN NaN NaN 0.93673 0.00056603 NaN NaN NaN NaN 64.641 0.35629 64.641 64.462 64.818 0 0 0 0 0.0090668 1 30789 41.088 30.603 1 NaN NaN 0 8101700 0 8101700 1250 158 625 694 1978 1978 37;38 EAPPMEKPEVVK 12 2 0 Oxidation (M) _EAPPM(ox)EKPEVVK_ EAPPM(1)EKPEVVK EAPPM(43.38)EKPEVVK 0 1 0 1 K7EM56;A0A0B4J2B4;S4R417;K7EQJ5;K7ELC2;P62841;S4R456;K7EJ78 K7EM56 K7EM56 RPS15 40S ribosomal protein S15 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 457.2393 3 457.239244 1368.6959 88899.65 0.21711 9.9273E-05 -0.30412 -0.00013906 -0.087007 -3.9783E-05 457.57349731665 462.581943345973 64.343 0.52522 64.343 64.038 64.563 0 166 36 6 0 0 0 0.025683 1 30511 43.382 28.221 1 1.3683 1.6932 0 35936000 17360000 18575000 1251 312 626 695 1979 1979 74 EAQAGPSPVFGSPHLLAK 18 1 0 2 Phospho (STY) _EAQAGPS(ph)PVFGS(ph)PHLLAK_ EAQAGPS(1)PVFGS(1)PHLLAK EAQAGPS(59.54)PVFGS(59.54)PHLLAK 0 0 2 0 A0A024R8E9;Q5T8A7 A0A024R8E9 A0A024R8E9 KIAA0649;PPP1R26 Protein phosphatase 1 regulatory subunit 26 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 655.968 3 655.967224 1964.87984 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.02 1 109.02 108.52 109.52 -7.6294E-06 0 0 0 0.00010344 1 64023 59.539 49.071 1 1252 152 627 696 1980 1980 234;235 EAQQKVPDEEENEESDNEKETEK 23 3 0 Phospho (STY) _EAQQKVPDEEENEES(ph)DNEKETEK_ EAQQKVPDEEENEES(0.996)DNEKET(0.004)EK EAQQKVPDEEENEES(23.73)DNEKET(-23.73)EK 0 0 1 2 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 939.0555 3 938.720615 2813.14002 60747.9 0.59349 0.00055712 -0.44999 -0.00042241 0.1435 0.00013471 939.054661370453 947.068560286415 19.37 0.91819 19.37 18.961 19.879 0 280 40 14 0 0 0 1.3763E-19 1 6344 86.577 75.327 2 1.3426 1.1379 0 675880000 264320000 411560000 1253 962 628 697 1981 1981 1687 EASLQFVVEPSEATNR 16 0 1 Phospho (STY) _EAS(ph)LQFVVEPSEATNR_ EAS(1)LQFVVEPSEATNR EAS(72.5)LQFVVEPS(-72.5)EAT(-76.79)NR 0 0 1 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 934.4304 2 928.924938 1855.83532 62313.6 0.90969 0.00084503 0.14038 0.0001304 1.0501 0.00097543 928.925195470149 933.929004087705 108.34 0.73563 108.34 108.02 108.76 0 175 57 5 0 0 0 1.1687E-06 2 63618 78.932 66.099 3 0.38755 0.48388 0 38808000 26196000 12612000 1254 1035 629 698 1982;1983 1983 1911 EATAQKPTGSVGSTVTTPPPLVR 23 1 1 Phospho (STY) _EATAQKPTGSVGSTVTT(ph)PPPLVR_ EATAQKPTGSVGSTVT(0.251)T(0.749)PPPLVR EAT(-68.59)AQKPT(-62.64)GS(-62.64)VGS(-41.59)T(-40.32)VT(-4.75)T(4.75)PPPLVR 0 0 1 1 A0A024R7K7;A0A024R7M6;Q86YP4 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 798.0792 3 792.071978 2373.19411 69030.82 0.66999 0.00053068 -0.47619 -0.00037718 0.1938 0.0001535 792.071698996173 798.413440742248 92.193 1.1784 92.193 91.665 92.844 -7.6294E-06 667 104 9 0 0 0 2.724E-45 1 51321 122.3 111.79 7 0.6427 0.77159 0 151200000 85496000 65704000 1255 136 630 699 1984 1984 2643 EATGHFQESEPFSHIDPEESEETR 24 0 1 Unmodified _EATGHFQESEPFSHIDPEESEETR_ 0 0 0 0 Q15021;B4E0B7;B3KMS0;B3KY03;E7EN77;Q6ZV00 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 698.0565 4 697.804679 2787.18961 72144.55 0.84326 0.00058843 -0.032259 -2.251E-05 0.811 0.00056592 698.306051508943 700.557331097515 110.48 0.81097 110.48 110.24 111.05 -7.6294E-06 390 69 9 0 0 0 0.00040159 2 65127 31.176 26.644 1 0.87272 1.0982 0 47872000 27564000 20308000 1256 1067 631 700 1985;1986 1986 EATGHFQESEPFSHIDPEESEETR 24 0 1 Unmodified _EATGHFQESEPFSHIDPEESEETR_ 0 0 0 0 Q15021;B4E0B7;B3KMS0;B3KY03;E7EN77;Q6ZV00 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 698.0562 4 697.804679 2787.18961 71951.49 0.807 0.00056313 0.41272 0.000288 1.2197 0.00085113 698.055616351976 700.557929689307 111.2 0.69219 111.2 110.9 111.59 -7.6294E-06 194 60 6 0 0 0 0.010929 1 65738 17.502 17.502 1 0.86727 1.07 0 32634000 21592000 11042000 1257 1067 631 700 1987 1987 ECPSDECGAGVFMASHFDR 19 0 1 Oxidation (M) _ECPSDECGAGVFM(ox)ASHFDR_ ECPSDECGAGVFM(1)ASHFDR ECPSDECGAGVFM(77.87)ASHFDR 0 1 0 0 Q5RKT7;B2RDW1;P62979;Q8WYN9 Q5RKT7 Q5RKT7 RPS27A;HEL112 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 733.6285 3 729.955801 2186.84557 NaN NaN NaN 0.078801 5.7521E-05 NaN NaN NaN NaN 93.791 0.54592 93.791 93.594 94.14 -7.6294E-06 0 0 0 2.6205E-12 1 52484 77.871 65.953 1 NaN NaN 0 10291000 0 10291000 1258 558 632 701 1988 1988 142 EDAIEHFMK 9 1 0 Oxidation (M) _EDAIEHFM(ox)K_ EDAIEHFM(1)K EDAIEHFM(146.58)K 0 1 0 0 B2R5W3;A0A024R3T8;P09874;B4E0E1 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 568.2587 2 568.258056 1134.50156 79276.8 0.56592 0.00032159 -0.090534 -5.1447E-05 0.47539 0.00027014 568.257955056386 572.2650314319 79.371 1.0418 79.371 78.861 79.903 0 352 93 5 0 0 0 3.1913E-14 2 41611 146.58 94.797 1 0.84067 1.0528 0 61128000 32692000 28436000 1259 81 633 702 1989;1990 1990 16 EDASSPAGTEDSHLNGYGR 19 0 1 Phospho (STY) _EDAS(ph)SPAGTEDSHLNGYGR_ EDAS(0.498)S(0.498)PAGT(0.004)EDSHLNGYGR EDAS(0)S(0)PAGT(-20.47)EDS(-33.79)HLNGY(-43.35)GR 0 0 1 0 D3DRJ1;B4DR27;B1APH0;Q6ZN30 D3DRJ1 D3DRJ1 hCG_27250;BNC2 Zinc finger protein basonuclin-2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 685.2807 3 681.607762 2041.80146 NaN NaN NaN 1.7055 0.0011625 NaN NaN NaN NaN 56.487 0.60744 56.487 56.097 56.705 0 0 0 0 0.00035672 1 24431 46.543 37.496 5 NaN NaN 0 13304000 0 13304000 1260 520 634 703 1991 1991 886;887 EDENLVINEVINSPK 15 1 0 Phospho (STY) _EDENLVINEVINS(ph)PK_ EDENLVINEVINS(1)PK EDENLVINEVINS(192.68)PK 0 0 1 0 A0A024RC19;Q5FWF5 A0A024RC19 A0A024RC19 ESCO1 N-acetyltransferase ESCO1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 896.923 2 896.921864 1791.82917 64538.14 0.77114 0.00069166 0.10793 9.6803E-05 0.87907 0.00078846 896.921845347779 900.929077791435 111.21 0.69794 111.21 110.85 111.55 -7.6294E-06 384 61 8 0 0 0 7.8232E-90 3 65652 192.68 192.68 1 0.8662 1.0772 0 83410000 44969000 38442000 1261 206 635 704 1992;1993;1994 1992 317 EDGEEPPGTSQTSPEEFTDAK 21 1 0 Phospho (STY) _EDGEEPPGT(ph)SQTSPEEFTDAK_ EDGEEPPGT(0.249)S(0.249)QT(0.249)S(0.249)PEEFT(0.002)DAK EDGEEPPGT(0)S(0)QT(0)S(0)PEEFT(-20.73)DAK 0 0 1 0 A8K0P8;Q68CQ4 A8K0P8 A8K0P8 DIEXF Digestive organ expansion factor homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1170.4727 2 1165.96284 2329.91113 58349.82 0.050151 5.8474E-05 0.15015 0.00017507 0.2003 0.00023355 1166.4638662482 1169.9698123927 73.094 0.66381 73.094 72.789 73.453 0 223 58 5 0 0 0 0.00059006 1 37066 40.025 40.025 5 0.83304 1.0458 0 28053000 16262000 11790000 1262 442 636 705 1995 1995 766;767;2730;2731 EDGSGDRGDGPFR 13 0 2 Unmodified _EDGSGDRGDGPFR_ 0 0 0 1 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 462.2054 3 455.532366 1363.57527 91172.04 0.0066884 3.0468E-06 0.34079 0.00015524 0.34748 0.00015829 455.53246530411 462.20456989873 66.682 0.44139 66.682 66.356 66.797 0 83 29 5 0 0 0 0.0085364 1 32540 52.265 45.606 1 0.36875 0.45707 0 35615000 25751000 9864300 1263 963 637 706 1996 1996 EDGSGDRGDGPFR 13 0 2 Unmodified _EDGSGDRGDGPFR_ 0 0 0 1 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 692.8025 2 682.794911 1363.57527 73615.12 0.68083 0.00046487 0.20083 0.00013713 0.88166 0.000602 682.794924949041 692.803069286051 67.676 0.61684 67.676 67.296 67.913 0 266 53 8 0 0 0 0.027561 1 33108 34.532 25.669 1 0.33574 0.41889 0 173170000 127920000 45251000 1264 963 637 706 1997 1997 EDILENEDEQNSPPK 15 1 0 Phospho (STY) _EDILENEDEQNS(ph)PPK_ EDILENEDEQNS(1)PPK EDILENEDEQNS(40.02)PPK 0 0 1 0 Q9NTI5;A9IYQ1 Q9NTI5 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 918.8824 2 918.880393 1835.74623 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.646 1 67.646 67.146 68.146 0 0 0 0 0.007443 1 33319 40.025 20.186 1 1265 1219 638 707 1998 1998 2466 EDILENEDEQNSPPKK 16 2 0 Phospho (STY) _EDILENEDEQNS(ph)PPKK_ EDILENEDEQNS(1)PPKK EDILENEDEQNS(129.02)PPKK 0 0 1 1 Q9NTI5;A9IYQ1 Q9NTI5 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 655.9564 3 655.621008 1963.8412 73949.68 0.7638 0.00050077 -0.038436 -2.5199E-05 0.72537 0.00047557 655.955349623884 660.963769402383 62.461 1.5161 62.461 61.458 62.975 0 653 110 8 0 0 0 8.5434E-33 3 29384 129.02 129.02 1 0.62516 0.80257 0 109120000 66586000 42535000 1266 1219 639 708 1999;2000;2001 2001 2466 EDILENEDEQNSPPKK 16 2 0 Phospho (STY) _EDILENEDEQNS(ph)PPKK_ EDILENEDEQNS(1)PPKK EDILENEDEQNS(171.87)PPKK 0 0 1 1 Q9NTI5;A9IYQ1 Q9NTI5 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 983.4305 2 982.927874 1963.8412 61300.13 0.39982 0.00039299 -0.084672 -8.3227E-05 0.31514 0.00030976 982.927587765917 990.942216639147 62.42 1.4186 62.42 61.446 62.865 -3.8147E-06 559 102 8 0 0 0 1.9889E-73 2 29051 171.87 155.73 1 0.63188 0.79825 0 61572000 37982000 23591000 1267 1219 639 708 2002;2003 2002 2466 EDILENEDEQNSPPKK 16 2 0 Phospho (STY) _EDILENEDEQNS(ph)PPKK_ EDILENEDEQNS(1)PPKK EDILENEDEQNS(174.23)PPKK 0 0 1 1 Q9NTI5;A9IYQ1 Q9NTI5 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 991.4445 2 982.927874 1963.8412 61618.51 0.52203 0.00051312 0.59586 0.00058568 1.1179 0.0010988 982.92835560987 990.942639423791 43.47 2.0712 43.47 42.788 44.859 3.8147E-06 1131 189 10 0 0 0 8.6501E-74 3 25515 174.23 151.76 1 0.65943 0.49066 0 149230000 91392000 57838000 1268 1219 639 708 2004;2005;2006 2005 2466 EDILENEDEQNSPPKK 16 2 0 Phospho (STY) _EDILENEDEQNS(ph)PPKK_ EDILENEDEQNS(1)PPKK EDILENEDEQNS(139.02)PPKK 0 0 1 1 Q9NTI5;A9IYQ1 Q9NTI5 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 660.9645 3 655.621008 1963.8412 75184.25 1.1657 0.00076423 0.020922 1.3717E-05 1.1866 0.00077795 655.955375072686 660.963760887019 43.508 2.1424 43.508 42.761 44.904 3.8147E-06 1266 195 10 0 0 0 2.1254E-43 1 25750 139.02 139.02 1 0.65452 0.48828 0 122910000 74068000 48838000 1269 1219 639 708 2007 2007 2466 EDLIREER 8 0 2 Unmodified _EDLIREER_ 0 0 0 1 O75643;A4FU77;Q9H8B9 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 540.2839 2 530.275095 1058.53564 85044.28 0.57513 0.00030498 0.3336 0.0001769 0.90873 0.00048188 530.275167823198 540.283304266522 76.918 0.46315 76.918 76.704 77.167 0 122 39 4 0 0 0 0.0054841 1 40000 98.933 67.86 1 0.89868 1.1046 0 26602000 12246000 14356000 1270 937 640 709 2008 2008 EDLLSPINQNTLQR 14 0 1 Phospho (STY) _EDLLS(ph)PINQNTLQR_ EDLLS(1)PINQNTLQR EDLLS(39.86)PINQNT(-39.86)LQR 0 0 1 0 Q6R327 Q6R327 Q6R327 RICTOR Rapamycin-insensitive companion of mTOR MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 865.9224 2 860.916916 1719.81928 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.47 1 111.47 110.97 111.97 0 0 0 0 8.3313E-05 1 65974 54.09 39.118 2 1271 1124 641 710 2009 2009 2140 EDLPAENGETKTEESPASDEAGEK 24 2 0 Phospho (STY) _EDLPAENGETKTEESPAS(ph)DEAGEK_ EDLPAENGETKTEES(0.001)PAS(0.999)DEAGEK EDLPAENGET(-93.12)KT(-63.34)EES(-32.57)PAS(32.57)DEAGEK 0 0 1 1 P05114;A6NL93;Q6NSG7;Q3B790;A6NEL0;A0A024R2A3 P05114 P05114 HMGN1;hCG_1979072 Non-histone chromosomal protein HMG-14 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 872.0306 3 871.69563 2612.06506 64475.85 0.93272 0.00081305 0.36152 0.00031514 1.2942 0.0011282 872.030239706414 877.373113203726 43.963 1.9074 43.963 43.203 45.11 3.8147E-06 1320 175 12 0 0 0 2.6617E-253 2 26071 242.02 212.87 4 0.33432 0.24704 0 249940000 190550000 59387000 1272 956 642 711 2010;2011 2011 1669;1670 EDLPAENGETKTEESPASDEAGEK 24 2 0 2 Phospho (STY) _EDLPAENGETKTEES(ph)PAS(ph)DEAGEK_ EDLPAENGET(0.035)KT(0.153)EES(0.813)PAS(1)DEAGEK EDLPAENGET(-13.71)KT(-7.26)EES(7.26)PAS(37.53)DEAGEK 0 0 2 1 P05114;A6NL93;Q6NSG7;Q3B790;A6NEL0;A0A024R2A3 P05114 P05114 HMGN1;hCG_1979072 Non-histone chromosomal protein HMG-14 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 898.6864 3 898.351073 2692.03139 64247.5 0.96235 0.00086452 0.022302 2.0035E-05 0.98465 0.00088456 898.685391599435 904.028203792814 48.905 1.2805 48.905 48.386 49.667 0 988 121 13 0 0 0 5.0167E-20 1 29634 85.337 67.039 6 0.32537 0.24127 0 192910000 146620000 46293000 1273 956 642 712 2012 2012 1669;1670 EDLRLPEGDLGK 12 1 1 Unmodified _EDLRLPEGDLGK_ 0 0 0 1 I3L397;I3L504;P63241 I3L397 I3L397 EIF5A Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 680.3656 2 671.354074 1340.69359 NaN NaN NaN NaN NaN NaN NaN NaN NaN 102.36 1 102.36 101.86 102.86 0 0 0 0 0.0009949 1 58971 63.864 35.782 1 1274 886 643 713 2013 2013 EDLRNEVQK 9 1 1 Unmodified _EDLRNEVQK_ 0 0 0 1 REV__B1AJZ2 REV__B1AJZ2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 377.8658 3 377.531527 1129.57275 97270.27 -0.028111 -1.0613E-05 -0.11348 -4.2843E-05 -0.14159 -5.3456E-05 377.531415964204 383.538917843843 65.33 0.39641 65.33 65.149 65.545 0 139 28 7 0 0 0 0.014209 1 31370 55.549 11.232 1 0.76337 0.9093 0 82680000 48570000 34109000 + 1275 1264 644 714 2014 2014 EDLSGIAEMFK 11 1 0 Oxidation (M) _EDLSGIAEM(ox)FK_ EDLSGIAEM(1)FK EDLSGIAEM(80.23)FK 0 1 0 0 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 632.3048 2 628.297378 1254.5802 NaN NaN NaN -0.36523 -0.00022948 NaN NaN NaN NaN 106.55 0.43861 106.55 106.32 106.75 7.6294E-06 0 0 0 0.0013638 1 61990 80.231 54.186 1 NaN NaN 0 5105000 0 5105000 1276 994;1130 645 715 2015 2015 279 EDPQARPLEGSSSEDSPPEGQAPPSHSPR 29 0 2 Phospho (STY) _EDPQARPLEGSSSEDSPPEGQAPPSHS(ph)PR_ EDPQARPLEGS(0.002)S(0.002)S(0.004)EDS(0.107)PPEGQAPPS(0.387)HS(0.498)PR EDPQARPLEGS(-24.77)S(-24.53)S(-21.04)EDS(-6.67)PPEGQAPPS(-1.09)HS(1.09)PR 0 0 1 1 Q6AHZ7;Q12789 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1 General transcription factor 3C polypeptide 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 786.3477 4 781.092821 3120.34218 68497.8 0.95173 0.00074339 0.0042823 3.3449E-06 0.95602 0.00074674 781.343539323571 786.347805154892 45.921 1.1922 45.921 45.369 46.561 -3.8147E-06 682 110 11 0 0 0 7.1888E-11 1 27211 45.079 39.298 6 1.7169 1.4863 0 35564000 11864000 23700000 1277 1044 646 716 2016 2016 1946;1947;1948 EDQTEYLEER 10 0 1 Unmodified _EDQTEYLEER_ 0 0 0 0 A0A024RD80;P08238;B4DMA2;B4DGL0;Q6PK50;Q58FF7;Q58FF6;G3V2J8;Q2VPJ6;K9JA46;P07900;Q8TBA7;Q86U12 A0A024RD80;Q2VPJ6 A0A024RD80 HSP90AB1;HSP90AB3P;HSP90AB4P;HSP90AA1;EL52 Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4;Heat shock protein HSP 90-alpha ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 656.2883 2 656.288596 1310.56264 NaN NaN NaN 0.62996 0.00041344 NaN NaN NaN NaN 63.487 0.62338 63.487 63.054 63.678 0 0 0 0 0.00039298 1 29761 77.677 51.572 1 NaN NaN 0 15038000 15038000 0 1278 223;906 647 717 2017 2017 EDSQRPGAHLTVK 13 1 1 Unmodified _EDSQRPGAHLTVK_ 0 0 0 1 F8W6I7;A0A024RC46;A0A024RB53;A0A024RAZ7;P09651;Q6IPF2;F8VZ49;Q9BSM5;Q0VAC0;F8VYN5;F8W646;B4DP35;A0A024QZ98;Q32P51 F8W6I7 F8W6I7 HNRNPA1;hCG_2020860;HNRPA1;RP11-78J21.1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 479.9191 3 479.919673 1436.73719 86616.14 0.3283 0.00015756 -0.14987 -7.1926E-05 0.17843 8.5631E-05 479.91959412536 485.927063410029 82.632 1.3431 82.632 82.346 83.69 7.6294E-06 238 125 3 0 0 0 0.0010944 2 44125 77.192 77.192 1 2.2312 2.7134 0 407580000 134690000 272890000 1279 188 648 718 2018;2019 2019 EDSQRPGAHLTVK 13 1 1 Unmodified _EDSQRPGAHLTVK_ 0 0 0 1 F8W6I7;A0A024RC46;A0A024RB53;A0A024RAZ7;P09651;Q6IPF2;F8VZ49;Q9BSM5;Q0VAC0;F8VYN5;F8W646;B4DP35;A0A024QZ98;Q32P51 F8W6I7 F8W6I7 HNRNPA1;hCG_2020860;HNRPA1;RP11-78J21.1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 485.9272 3 479.919673 1436.73719 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.035 1 84.035 83.535 84.535 0 0 0 0 0.0023438 1 45171 44.511 36.786 1 1280 188 648 718 2020 2020 EDSQRPGAHLTVK 13 1 1 Unmodified _EDSQRPGAHLTVK_ 0 0 0 1 F8W6I7;A0A024RC46;A0A024RB53;A0A024RAZ7;P09651;Q6IPF2;F8VZ49;Q9BSM5;Q0VAC0;F8VYN5;F8W646;B4DP35;A0A024QZ98;Q32P51 F8W6I7 F8W6I7 HNRNPA1;hCG_2020860;HNRPA1;RP11-78J21.1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 485.9269 3 479.919673 1436.73719 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.965 1 84.965 84.465 85.465 7.6294E-06 0 0 0 6.3384E-06 1 45821 74.649 51.621 1 1281 188 648 718 2021 2021 EDSVKPGAHLTVK 13 2 0 Unmodified _EDSVKPGAHLTVK_ 0 0 0 1 B4E3E6;B4DDB6;P51991;Q65ZQ3 B4E3E6 B4E3E6 HNRPA3;HNRNPA3;D10S102 Heterogeneous nuclear ribonucleoprotein A3 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 460.9219 3 460.920903 1379.74088 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.312 1 93.312 92.812 93.812 0 0 0 0 0.0136 1 51969 36.631 23.042 1 1282 614 649 719 2022 2022 EDTEEHHLR 9 0 1 Unmodified _EDTEEHHLR_ 0 0 0 0 F8W6I7;A0A024RC46;A0A024RB53;A0A024RAZ7;P09651;F8VTQ5;Q6IPF2;F8VZ49;Q9BSM5;Q0VAC0;F8VYN5;A0A024QZ98;Q32P51;I6L957;A0A087WUI2;A0A024RA28;P22626 F8W6I7;I6L957 F8W6I7 HNRNPA1;hCG_2020860;HNRPA1;RP11-78J21.1;HNRNPA1L2;HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2;Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 588.2697 2 583.265259 1164.51596 77626.04 0.59837 0.00034901 0.19025 0.00011097 0.78862 0.00045997 583.264972591499 588.269215128222 71.789 1.5115 71.789 70.863 72.375 0 363 140 4 0 0 0 0.00092076 2 36041 84.568 60.413 1 2.0853 2.6224 0 43714000 14055000 29660000 1283 188;177 650 720 2023;2024 2024 EDTEEHHLR 9 0 1 Unmodified _EDTEEHHLR_ 0 0 0 0 F8W6I7;A0A024RC46;A0A024RB53;A0A024RAZ7;P09651;F8VTQ5;Q6IPF2;F8VZ49;Q9BSM5;Q0VAC0;F8VYN5;A0A024QZ98;Q32P51;I6L957;A0A087WUI2;A0A024RA28;P22626 F8W6I7;I6L957 F8W6I7 HNRNPA1;hCG_2020860;HNRPA1;RP11-78J21.1;HNRNPA1L2;HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2;Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 588.2697 2 583.265259 1164.51596 78087.02 0.50675 0.00029557 -0.10293 -6.0033E-05 0.40382 0.00023554 583.265063083901 588.269250063214 73.573 2.2073 73.573 72.008 74.216 0 560 186 5 0 0 0 1.0174E-13 4 36674 145.13 125.35 1 2.2862 2.8863 0 93262000 32521000 60742000 1284 188;177 650 720 2025;2026;2027;2028 2025 EDTEEHHLR 9 0 1 Unmodified _EDTEEHHLR_ 0 0 0 0 F8W6I7;A0A024RC46;A0A024RB53;A0A024RAZ7;P09651;F8VTQ5;Q6IPF2;F8VZ49;Q9BSM5;Q0VAC0;F8VYN5;A0A024QZ98;Q32P51;I6L957;A0A087WUI2;A0A024RA28;P22626 F8W6I7;I6L957 F8W6I7 HNRNPA1;hCG_2020860;HNRPA1;RP11-78J21.1;HNRNPA1L2;HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2;Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 389.1794 3 389.179265 1164.51596 95441.84 -0.39525 -0.00015382 0.26551 0.00010333 -0.12974 -5.0491E-05 389.179347188923 392.515393177282 73.602 2.4784 73.602 72.063 74.541 0 927 211 8 0 0 0 0.0045155 3 36677 47.603 36.39 1 2.3099 2.9201 0 201700000 61640000 140060000 1285 188;177 650 720 2029;2030;2031 2029 EDVEVAESPLR 11 0 1 Phospho (STY) _EDVEVAES(ph)PLR_ EDVEVAES(1)PLR EDVEVAES(110.31)PLR 0 0 1 0 B7Z5I6;Q99567;B4DP20;J3KMX1 B7Z5I6 B7Z5I6 NUP88 Nuclear pore complex protein Nup88 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 662.294 2 662.29504 1322.57553 71840.73 0.70759 0.00046863 -0.1577 -0.00010444 0.54989 0.00036419 662.294128611486 667.298268965214 73.847 0.72607 73.847 73.588 74.314 0 189 61 6 0 0 0 1.0883E-08 1 37876 110.31 85.451 1 0.84793 1.0426 0 27325000 13749000 13576000 1286 708 651 721 2032 2032 1173 EDVTPPLSPDDLK 13 1 0 2 Phospho (STY) _EDVT(ph)PPLS(ph)PDDLK_ EDVT(1)PPLS(1)PDDLK EDVT(76.36)PPLS(76.36)PDDLK 0 0 2 0 Q9Y4B5 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 797.3331 2 793.325352 1584.63615 70444.28 1.043 0.00082748 -0.13411 -0.00010639 0.90894 0.00072109 793.32517607816 797.331944114276 103.74 0.75483 103.74 103.34 104.1 -7.6294E-06 163 56 5 0 0 0 0.00042769 2 59903 76.358 62.944 1 0.77686 0.94663 0 18469000 11729000 6739800 1287 1253 652 722 2033;2034 2034 2580;3006 EEAEALYHSK 10 1 0 Unmodified _EEAEALYHSK_ 0 0 0 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 588.7803 2 588.78021 1175.54587 NaN NaN NaN 0.95815 0.00056414 NaN NaN NaN NaN 67.972 0.46007 67.972 67.835 68.295 7.6294E-06 0 0 0 3.5691E-22 1 33556 116.05 88.564 1 NaN NaN 0 39084000 39084000 0 + 1288 758 653 723 2035 2035 EEAPASPLRPLYPQISPLK 19 1 1 2 Phospho (STY) _EEAPAS(ph)PLRPLYPQIS(ph)PLK_ EEAPAS(0.692)PLRPLY(0.319)PQIS(0.988)PLK EEAPAS(3.44)PLRPLY(-3.44)PQIS(17.72)PLK 0 0 2 1 U3KQ26;B4DY33;A4D1Z4;P85037 U3KQ26 U3KQ26 FOXK1;KIAA0415 Forkhead box protein K1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 762.3782 3 756.035527 2265.08475 69162.59 0.90727 0.00068593 -0.22049 -0.0001667 0.68678 0.00051923 756.369551776988 762.377266567473 123.49 0.65775 123.49 123.18 123.84 0 357 58 9 0 0 0 1.9364E-05 1 74607 50.426 50.426 3 0.89648 1.0615 0 52126000 23156000 28970000 1289 415 654 724 2036 2036 709;710 EEAQSLEDLAGFK 13 1 0 Unmodified _EEAQSLEDLAGFK_ 0 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 723.3565 2 718.848821 1435.68309 NaN NaN NaN -0.65773 -0.00047281 NaN NaN NaN NaN 108.32 0.38231 108.32 108.05 108.43 0 0 0 0 2.4247E-10 1 63551 101.38 78.641 1 NaN NaN 0 9711600 0 9711600 1290 994 655 725 2037 2037 EEAQSLEDLAGFK 13 1 0 Unmodified _EEAQSLEDLAGFK_ 0 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 723.358 2 718.848821 1435.68309 74817.19 1.1945 0.00085864 0.052935 3.8052E-05 1.2474 0.00089669 719.350187919927 722.855905299176 108.42 0.93135 108.42 107.98 108.91 -7.6294E-06 241 92 5 0 0 0 0.034783 1 69580 40.616 36.317 1 4.1951 3.134 0 9611500 2611000 7000500 1291 994 655 725 2038 2038 EEAQSLEDLAGFK 13 1 0 Phospho (STY) _EEAQS(ph)LEDLAGFK_ EEAQS(1)LEDLAGFK EEAQS(77.89)LEDLAGFK 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 758.8369 2 758.831986 1515.64942 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.59 1 110.59 110.09 111.09 -7.6294E-06 0 0 0 1.6942E-05 1 65293 77.894 52.236 1 1292 994 655 726 2039 2039 1775 EEAQSLEDLAGFK 13 1 0 Phospho (STY) _EEAQS(ph)LEDLAGFK_ EEAQS(1)LEDLAGFK EEAQS(88.16)LEDLAGFK 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 762.84 2 758.831986 1515.64942 70581.16 1.1268 0.00085502 0.13149 9.9778E-05 1.2582 0.0009548 758.832201093605 762.839160494623 117.22 0.98138 117.22 116.78 117.76 0 546 92 8 0 0 0 6.6409E-05 2 75350 88.163 77.011 1 1.9001 1.259 0 72063000 26126000 45938000 1293 994 655 726 2040;2041 2040 1775 EEASDDDMEGDEAVVR 16 0 1 Oxidation (M),Phospho (STY) _EEAS(ph)DDDM(ox)EGDEAVVR_ EEASDDDM(1)EGDEAVVR EEAS(1)DDDMEGDEAVVR EEASDDDM(141.34)EGDEAVVR EEAS(141.34)DDDMEGDEAVVR 0 1 1 0 O75643 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 936.8401 2 931.835325 1861.6561 62866.96 0.71413 0.00066545 0.053691 5.0031E-05 0.76782 0.00071548 931.835401760563 936.83966002063 49.433 1.5109 49.433 48.572 50.083 0 785 122 8 0 0 0 5.3332E-43 3 19746 141.34 126.92 1 0.8981 1.1316 0 57390000 28426000 28964000 1294 937 656 727 2042;2043;2044 2043 254 1606 EECGPLPIVVASPR 14 0 1 Phospho (STY) _EECGPLPIVVAS(ph)PR_ EECGPLPIVVAS(1)PR EECGPLPIVVAS(53.98)PR 0 0 1 0 P82675 P82675 P82675 MRPS5 28S ribosomal protein S5, mitochondrial ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 802.8823 2 802.381123 1602.74769 NaN NaN NaN -0.85235 -0.00068391 NaN NaN NaN NaN 113.83 0.46974 113.83 113.63 114.1 0 0 0 0 0.0010383 1 67700 53.981 44.294 1 NaN NaN 0 6657600 6657600 0 1295 1029 657 728 2045 2045 1858 EECSPNMDAGDRVSPR 16 0 2 Oxidation (M),Phospho (STY) _EECSPNM(ox)DAGDRVS(ph)PR_ EECSPNM(1)DAGDRVSPR EECS(0.025)PNMDAGDRVS(0.975)PR EECSPNM(42.12)DAGDRVSPR EECS(-15.97)PNMDAGDRVS(15.97)PR 0 1 1 1 Q9NX57 Q9NX57 Q9NX57 RAB20 Ras-related protein Rab-20 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 639.2494 3 639.248523 1914.72374 74822.38 0.7535 0.00048168 -0.16804 -0.00010742 0.58547 0.00037426 639.24869648537 645.92101638329 21.132 0.377 21.132 20.932 21.309 0 110 17 10 0 0 0 0.00039174 1 7926 42.118 37.875 2 0.86049 0.73853 0 17332000 8757400 8574800 1296 1221 658 729 2046 2046 348 2476 EEEEDTAEKPGKEEDVVTPK 20 3 0 Unmodified _EEEEDTAEKPGKEEDVVTPK_ 0 0 0 2 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 753.6879 3 753.688537 2258.04378 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.87 1 75.87 75.37 76.37 0 0 0 0 0.032661 1 39180 30.428 20.678 1 1297 1059 659 730 2047 2047 EEEEEAGESVEDIFSEVVGR 20 0 1 Phospho (STY) _EEEEEAGES(ph)VEDIFSEVVGR_ EEEEEAGES(0.998)VEDIFS(0.002)EVVGR EEEEEAGES(26.24)VEDIFS(-26.24)EVVGR 0 0 1 0 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1160.4833 2 1159.98103 2317.94751 57406.75 0.70393 0.00081655 -0.47219 -0.00054773 0.23174 0.00026882 1160.48166340837 1165.48684584833 133.55 0.15242 133.55 133.49 133.64 0 15 4 6 0 0 0 6.133E-07 1 81394 54.524 49.041 2 0.26714 0.32855 0 26023000 16441000 9581900 1298 1162 660 731 2048 2048 2241 EEEEEEEEDQEGDRETTIR 19 0 2 Unmodified _EEEEEEEEDQEGDRETTIR_ 0 0 0 1 A0A0B4J2E5;Q15269 A0A0B4J2E5 A0A0B4J2E5 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 784.9925 3 784.657965 2350.95207 68552.88 0.83032 0.00065152 0.56138 0.00044049 1.3917 0.001092 784.658357191295 791.330686072537 59.626 0.52258 59.626 59.345 59.868 3.8147E-06 288 41 9 0 0 0 5.6026E-73 1 26702 141 132.92 1 0.81466 1.0139 0 95037000 51125000 43912000 1299 313 661 732 2049 2049 EEEEQQEGGFASPR 14 0 1 Phospho (STY) _EEEEQQEGGFAS(ph)PR_ EEEEQQEGGFAS(1)PR EEEEQQEGGFAS(69.33)PR 0 0 1 0 A0A087WVR3;A0A087WTW0;Q96T88;B4E0F9;A0A087WWG9 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 841.8338 2 836.827963 1671.64137 65717.19 0.88756 0.00074273 0.2911 0.0002436 1.1787 0.00098634 836.828085919621 841.832299250443 36.922 0.64878 36.922 36.628 37.276 0 341 55 8 0 0 0 0.0010288 2 20831 69.331 62.947 1 0.85221 0.59157 0 40112000 22229000 17883000 1300 246 662 733 2050;2051 2051 387 EEEHDCFLEEIMTK 14 1 0 Oxidation (M) _EEEHDCFLEEIM(ox)TK_ EEEHDCFLEEIM(1)TK EEEHDCFLEEIM(40.94)TK 0 1 0 0 H0Y4R1;P12268;Q6QE17;B7Z1G4;E7ETK5 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 611.9305 3 609.258815 1824.75462 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.62 1 110.62 110.12 111.12 0 0 0 0 0.0029729 1 65320 40.941 30.154 1 1301 850 663 734 2052 2052 231 EEEIAALVIDNGSGMCK 17 1 0 Acetyl (Protein N-term),Oxidation (M) _(ac)EEEIAALVIDNGSGM(ox)CK_ EEEIAALVIDNGSGM(1)CK EEEIAALVIDNGSGM(111.12)CK 1 1 0 0 B4E3A4;P63261;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65 B4E3A4 B4E3A4 ACTG1 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 951.9396 2 947.432066 1892.84958 NaN NaN NaN -0.45952 -0.00043536 NaN NaN NaN NaN 129.47 0.39133 129.47 129.29 129.68 0 0 0 0 8.2338E-23 2 78656 111.12 89.492 1 NaN NaN 0 2536300 0 2536300 1302 685 664 735 2053;2054 2053 179 EEGSDIEDEDMEELLNDTR 19 0 1 Oxidation (M),Phospho (STY) _EEGS(ph)DIEDEDM(ox)EELLNDTR_ EEGSDIEDEDM(1)EELLNDTR EEGS(1)DIEDEDMEELLNDTR EEGSDIEDEDM(62.47)EELLNDTR EEGS(62.47)DIEDEDMEELLNDT(-62.47)R 0 1 1 0 F5H5U2;A0A024RBS0;Q8NHQ9 F5H5U2 F5H5U2 DDX55 ATP-dependent RNA helicase DDX55 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1172.9473 2 1167.94379 2333.87303 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.415 1 95.415 94.915 95.915 0 0 0 0 7.026E-05 1 53609 62.475 53.428 2 1303 202 665 736 2055 2055 48 315 EEHGGLIRSPR 11 0 2 Phospho (STY) _EEHGGLIRS(ph)PR_ EEHGGLIRS(1)PR EEHGGLIRS(59.61)PR 0 0 1 1 B5BU25;P26368 B5BU25 B5BU25 U2AF2 Splicing factor U2AF 65 kDa subunit MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 444.2144 3 444.213631 1329.61906 90113.82 -0.37259 -0.00016551 0.46543 0.00020675 0.09284 4.1241E-05 444.213864646461 450.88596995396 22.498 0.63905 22.498 22.302 22.941 0 162 34 9 0 0 0 0.0030773 1 9035 59.607 39.598 1 0.22829 0.19867 0 103830000 84531000 19297000 1304 688 666 737 2056 2056 1134 EEHGGLIRSPR 11 0 2 Phospho (STY) _EEHGGLIRS(ph)PR_ EEHGGLIRS(1)PR EEHGGLIRS(59.75)PR 0 0 1 1 B5BU25;P26368 B5BU25 B5BU25 U2AF2 Splicing factor U2AF 65 kDa subunit MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 665.8171 2 665.816808 1329.61906 75768.05 0.42083 0.00028019 0.42358 0.00028202 0.84441 0.00056222 665.817092732814 675.825086755105 22.49 0.37127 22.49 22.345 22.716 0 80 20 5 0 0 0 0.0062589 1 9136 59.75 43.372 1 0.19014 0.16334 0 18198000 15106000 3091500 1305 688 666 737 2057 2057 1134 EEHGIELSSPR 11 0 1 Phospho (STY) _EEHGIELS(ph)SPR_ EEHGIELS(0.5)S(0.5)PR EEHGIELS(0)S(0)PR 0 0 1 0 O14647;A0A024RC75 O14647 O14647 CHD2 Chromodomain-helicase-DNA-binding protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 667.2941 2 667.292831 1332.57111 74643.35 1.0359 0.00069124 0.20718 0.00013825 1.2431 0.00082949 667.292903567687 672.297011120123 42.202 1.3905 42.202 41.578 42.968 0 557 121 7 0 0 0 3.0626E-26 3 25020 152.38 144.27 2 1.6097 1.1137 0 42079000 14376000 27703000 1306 920 667 738 2058;2059;2060 2060 1547;1548 EEHGIELSSPR 11 0 1 Phospho (STY) _EEHGIELSS(ph)PR_ EEHGIELS(0.343)S(0.657)PR EEHGIELS(-2.81)S(2.81)PR 0 0 1 0 O14647;A0A024RC75 O14647 O14647 CHD2 Chromodomain-helicase-DNA-binding protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 448.5339 3 445.197646 1332.57111 90220.36 0.29617 0.00013185 -0.095278 -4.2418E-05 0.20089 8.9437E-05 445.197602846239 448.53364139645 42.202 1.2767 42.202 41.578 42.854 0 596 111 8 0 0 0 0.0065999 1 24734 44.436 37.065 2 1.6217 1.1752 0 26539000 10018000 16521000 1307 920 667 738 2061 2061 1547;1548 EEHLDVASPDK 11 1 0 Phospho (STY) _EEHLDVAS(ph)PDK_ EEHLDVAS(1)PDK EEHLDVAS(179.67)PDK 0 0 1 0 B3KPJ8;A0A0S2Z5X6;Q969R5 B3KPJ8 B3KPJ8 L3MBTL2 Lethal(3)malignant brain tumor-like protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 660.2802 2 660.27939 1318.54423 74472.23 0.90697 0.00059886 -0.0078196 -5.1631E-06 0.89916 0.00059369 660.279239929239 664.286148912249 63.919 0.6077 63.919 63.627 64.235 0 219 40 9 0 0 0 6.4674E-58 2 30235 179.67 129.86 1 0.71632 0.88778 0 129060000 72339000 56725000 1308 363 668 739 2062;2063 2062 571 EEHLDVASPDK 11 1 0 Phospho (STY) _EEHLDVAS(ph)PDK_ EEHLDVAS(1)PDK EEHLDVAS(113.25)PDK 0 0 1 0 B3KPJ8;A0A0S2Z5X6;Q969R5 B3KPJ8 B3KPJ8 L3MBTL2 Lethal(3)malignant brain tumor-like protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 660.2806 2 660.27939 1318.54423 75493.35 1.1301 0.00074617 0.10612 7.0068E-05 1.2362 0.00081624 660.279841590472 664.286425262953 34.882 0.8171 34.882 34.546 35.363 0 337 63 8 0 0 0 7.5325E-09 2 19406 113.25 82.998 1 1.6335 1.0766 0 60139000 22166000 37974000 1309 363 668 739 2064;2065 2065 571 EEIFDDASPGK 11 1 0 Phospho (STY) _EEIFDDAS(ph)PGK_ EEIFDDAS(1)PGK EEIFDDAS(115.57)PGK 0 0 1 0 B7ZAX9;B4DZC0 B7ZAX9 B7ZAX9 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 648.2669 2 644.260665 1286.50678 NaN NaN NaN -0.92308 -0.0005947 NaN NaN NaN NaN 71.168 0.34188 71.168 70.875 71.217 0 0 0 0 1.6065E-22 1 35688 115.57 73.239 1 NaN NaN 0 7263900 0 7263900 1310 672 669 740 2066 2066 1118 EEIFDDASPGK 11 1 0 Phospho (STY) _EEIFDDAS(ph)PGK_ EEIFDDAS(1)PGK EEIFDDAS(62.09)PGK 0 0 1 0 B7ZAX9;B4DZC0 B7ZAX9 B7ZAX9 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 648.2688 2 644.260665 1286.50678 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.684 1 71.684 71.184 72.184 0 0 0 0 0.0016853 1 36054 62.088 28.198 1 1311 672 669 740 2067 2067 1118 EEIFDDASPGK 11 1 0 Phospho (STY) _EEIFDDAS(ph)PGK_ EEIFDDAS(1)PGK EEIFDDAS(74.54)PGK 0 0 1 0 B7ZAX9;B4DZC0 B7ZAX9 B7ZAX9 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 648.7704 2 644.260665 1286.50678 NaN NaN NaN -0.029905 -1.9267E-05 NaN NaN NaN NaN 68.906 1.715 68.906 68.079 69.794 0 0 0 0 0.0010728 2 42892 74.537 43.251 1 NaN NaN 0 14603000 0 14603000 1312 672 669 740 2068;2069 2068 1118 EEIQETQTPTHSR 13 0 1 Unmodified _EEIQETQTPTHSR_ 0 0 0 0 Q9BYG3;H7BZL0 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 522.5865 3 519.249748 1554.72741 83226.27 0.27858 0.00014465 0.058659 3.0459E-05 0.33724 0.00017511 519.249774610833 522.585814991409 57.786 1.1554 57.786 57.323 58.478 0 392 91 6 0 0 0 0.0022048 2 25217 53.377 40.725 1 0.99202 1.2518 0 70211000 35669000 34542000 1313 1201 670 741 2070;2071 2070 EEIQETQTPTHSR 13 0 1 Unmodified _EEIQETQTPTHSR_ 0 0 0 0 Q9BYG3;H7BZL0 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 778.3716 2 778.370983 1554.72741 69856.18 0.64254 0.00050014 0.32114 0.00024997 0.96369 0.0007501 778.371015493202 783.375557773996 57.775 0.74166 57.775 57.381 58.123 3.8147E-06 297 61 6 0 0 0 1.2691E-65 1 25438 192.5 134.64 1 0.95897 1.17 0 21376000 11192000 10184000 1314 1201 670 741 2072 2072 EELEFEVPFR 10 0 1 Unmodified _EELEFEVPFR_ 0 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 652.8237 2 647.819335 1293.62412 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.38 1 121.38 120.88 121.88 0 0 0 0 0.00040697 1 73271 79.906 47.066 1 1315 1254 671 742 2073 2073 EELEQASQAHGAR 13 0 1 Unmodified _EELEQASQAHGAR_ 0 0 0 0 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;A0A024R5G4;Q3SYK8;F5H6Y5;F5H4J1;A8K394 A0A087WY61 A0A087WY61 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 479.566 3 475.895416 1424.66442 89475.87 0.26517 0.00012619 -0.14261 -6.7868E-05 0.12256 5.8324E-05 475.895394246163 479.231561026005 58.76 0.62122 58.76 58.379 59 0 189 52 5 0 0 0 0.0019083 1 26199 61.235 51.392 1 0.79174 0.89747 0 10930000 6366600 4563200 1316 110 672 743 2074 2074 EELEQTYHAK 10 1 0 Unmodified _EELEQTYHAK_ 0 0 0 0 P20700;B4DZT3;E9PBF6;A0A0D9SFE5;Q6DC98 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 628.3068 2 624.298767 1246.58298 77639.21 0.63159 0.0003943 0.016342 1.0202E-05 0.64793 0.0004045 624.298763473591 628.305998102613 65.767 0.38892 65.767 65.591 65.979 0 148 29 8 0 0 0 4.7831E-176 2 31778 243.03 195.45 1 1.0832 1.3451 0 101110000 46927000 54184000 1317 972 673 744 2075;2076 2076 EELMSSDLEETAGSTSIPK 19 1 0 Oxidation (M),Phospho (STY) _EELM(ox)S(ph)SDLEETAGSTSIPK_ EELM(1)SSDLEETAGSTSIPK EELMS(0.727)S(0.273)DLEETAGSTSIPK EELM(113.29)SSDLEETAGSTSIPK EELMS(4.25)S(-4.25)DLEET(-38.27)AGS(-57.53)T(-63.69)S(-69.7)IPK 0 1 1 0 A8K9K6;O00567;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1064.9609 2 1060.45306 2118.89158 57201.8 0.11864 0.00012581 0.26873 0.00028498 0.38737 0.00041079 1060.95617536448 1064.45642676485 92.107 2.3483 92.107 90.67 93.018 0 1230 205 10 0 0 0 2.3489E-28 2 50954 113.29 105.27 6 0.6437 0.79364 0 1290100000 771490000 518630000 1318 504 674 745 2077;2078 2078 129 863;864 EELMSSDLEETAGSTSIPK 19 1 0 Oxidation (M),Phospho (STY) _EELM(ox)S(ph)SDLEETAGSTSIPK_ EELM(1)SSDLEETAGSTSIPK EELMS(0.487)S(0.487)DLEET(0.021)AGS(0.003)T(0.001)S(0.001)IPK EELM(42.47)SSDLEETAGSTSIPK EELMS(0)S(0)DLEET(-13.68)AGS(-22.09)T(-26)S(-26)IPK 0 1 1 0 A8K9K6;O00567;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1060.9546 2 1060.45306 2118.89158 NaN NaN NaN 1.2872 0.001365 NaN NaN NaN NaN 98.75 1.8899 98.75 97.869 99.759 0 0 0 0 0.00088185 1 63493 42.469 30.109 6 NaN NaN 0 389280000 389280000 0 1319 504 674 745 2079 2079 129 863;864 EELMSSDLEETAGSTSIPK 19 1 0 Oxidation (M),2 Phospho (STY) _EELM(ox)S(ph)S(ph)DLEETAGSTSIPK_ EELM(1)SSDLEETAGSTSIPK EELMS(1)S(1)DLEETAGSTSIPK EELM(141.13)SSDLEETAGSTSIPK EELMS(66.61)S(66.67)DLEET(-66.61)AGS(-81.54)T(-87.57)S(-93.4)IPK 0 1 2 0 A8K9K6;O00567;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1100.9384 2 1100.43623 2198.85791 57425.2 0.82697 0.00091003 -0.53676 -0.00059067 0.29022 0.00031936 1100.43599735691 1104.44289937087 96.015 1.7976 96.015 95.248 97.046 7.6294E-06 1105 154 13 0 0 0 1.291E-54 3 54159 141.13 131.34 15 0.75536 0.93162 0 1106300000 629880000 476380000 1320 504 674 746 2080;2081;2082 2081 129 863;864 EELMSSDLEETAGSTSIPK 19 1 0 Oxidation (M),2 Phospho (STY) _EELM(ox)S(ph)S(ph)DLEETAGSTSIPK_ EELM(1)SSDLEETAGSTSIPK EELMS(0.97)S(0.97)DLEET(0.047)AGS(0.007)T(0.004)S(0.002)IPK EELM(43.31)SSDLEETAGSTSIPK EELMS(16.36)S(16.36)DLEET(-16.36)AGS(-27.28)T(-30.54)S(-33.56)IPK 0 1 2 0 A8K9K6;O00567;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1100.4387 2 1100.43623 2198.85791 57374.46 0.77796 0.0008561 0.14855 0.00016347 0.92651 0.0010196 1100.93808899189 1104.44373555459 106.49 1.5685 106.49 105.99 107.55 0 1119 149 12 0 0 0 0.00012389 1 68708 43.305 37.812 15 0.66043 0.4404 0 673350000 398960000 274380000 1321 504 674 746 2083 2083 129 863;864 EELMSSDLEETAGSTSIPK 19 1 0 Phospho (STY) _EELMSS(ph)DLEETAGSTSIPK_ EELMS(0.462)S(0.536)DLEET(0.001)AGSTSIPK EELMS(-0.65)S(0.65)DLEET(-26.18)AGS(-37.03)T(-42.43)S(-41.77)IPK 0 0 1 0 A8K9K6;O00567;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1052.4579 2 1052.45561 2102.89666 58113.73 0.82257 0.00086572 -0.50612 -0.00053266 0.31646 0.00033306 1053.45634384099 1056.4628497514 114.01 1.4119 114.01 113.38 114.79 -7.6294E-06 731 133 11 0 0 0 2.7138E-07 1 73256 61.815 61.815 6 0.79696 0.53289 0 129020000 76174000 52846000 1322 504 674 747 2084 2084 863;864 EELNSSVAIADTALEDRK 18 1 1 Phospho (STY) _EELNSS(ph)VAIADTALEDRK_ EELNS(0.217)S(0.782)VAIADTALEDRK EELNS(-5.56)S(5.56)VAIADT(-32.83)ALEDRK 0 0 1 1 B3KPM8;Q8N5C6 B3KPM8 B3KPM8 SRBD1 S1 RNA-binding domain-containing protein 1 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 686.9957 3 680.987691 2039.94124 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.603 1 94.603 94.103 95.103 -7.6294E-06 0 0 0 0.0028923 1 60921 46.162 40.382 3 1323 590 675 748 2085 2085 972 EENSTEEQALEDQNAK 16 1 0 Phospho (STY) _EENS(ph)TEEQALEDQNAK_ EENS(0.5)T(0.5)EEQALEDQNAK EENS(0)T(0)EEQALEDQNAK 0 0 1 0 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 957.9144 2 957.883664 1913.75277 63135.65 0.60421 0.00057876 0.63975 0.00061281 1.244 0.0011916 957.88391739278 961.891598473151 48.944 0.71975 48.944 48.558 49.278 0 190 53 5 0 0 0 0.00016802 2 19129 52.693 46.847 2 0.83111 0.98556 0 7611100 4224300 3386800 1324 1213 676 749 2086;2087 2086 2436;2991 EENSTEEQALEDQNAK 16 1 0 Phospho (STY) _EENS(ph)TEEQALEDQNAK_ EENS(0.5)T(0.5)EEQALEDQNAK EENS(0)T(0)EEQALEDQNAK 0 0 1 0 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 958.3844 2 957.883664 1913.75277 64380.5 0.75648 0.00072462 0.77751 0.00074477 1.534 0.0014694 957.884375857225 962.394439995422 43.448 0.54275 43.448 43.154 43.697 3.8147E-06 152 45 5 0 0 0 0.00095427 1 25567 42.209 42.209 2 0.66118 0.51055 0 12482000 7320300 5161800 1325 1213 676 749 2088 2088 2436;2991 EENSTEEQALEDQNAK 16 1 0 Unmodified _EENSTEEQALEDQNAK_ 0 0 0 0 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 917.9003 2 917.900499 1833.78644 66308.99 0.16042 0.00014725 -0.44898 -0.00041212 -0.28856 -0.00026487 917.90080002357 922.406409205795 52.349 0.78302 52.349 51.984 52.767 0 131 60 4 0 0 0 0.008577 1 21553 35.645 35.645 1 0.91696 1.0865 0 5507900 2706800 2801100 1326 1213 676 750 2089 2089 EENSTEEQALEDQNAK 16 1 0 Unmodified _EENSTEEQALEDQNAK_ 0 0 0 0 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 921.9087 2 917.900499 1833.78644 65952.98 1.0224 0.00093843 -0.40935 -0.00037574 0.61301 0.00056269 917.899289432688 921.907486421107 32.643 0.36632 32.643 32.46 32.826 0 95 25 6 0 0 0 0.00012688 1 17653 69.229 59.796 1 1.9833 1.5035 0 10919000 3383000 7535800 1327 1213 676 750 2090 2090 EEPAPEEEEPLLLQRPER 18 0 2 Unmodified _EEPAPEEEEPLLLQRPER_ 0 0 0 1 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 721.0328 3 721.030569 2160.06988 78393.21 1.0833 0.00078109 0.40395 0.00029126 1.4872 0.0010723 721.364440076257 728.03808969031 105.3 0.15797 105.3 105.21 105.37 0 20 11 4 0 0 0 0.024577 1 61046 26.474 22.813 1 NaN NaN 0 8072700 4236800 3835900 1328 1199 677 751 2091 2091 EEPAPEEEEPLLLQRPER 18 0 2 Unmodified _EEPAPEEEEPLLLQRPER_ 0 0 0 1 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 728.0385 3 721.030569 2160.06988 73801.57 1.0605 0.00076468 -1.498 -0.0010801 -0.43747 -0.00031543 721.028974991425 727.702106032257 105.43 0.23611 105.43 105.34 105.57 -7.6294E-06 37 15 4 0 0 0 0.029195 1 61100 25.508 17.611 1 0.71562 0.82496 0 6191000 2332800 3858300 1329 1199 677 751 2092 2092 EEPLSEEEPCTSTAIASPEK 20 1 0 Phospho (STY) _EEPLSEEEPCTSTAIAS(ph)PEK_ EEPLSEEEPCTSTAIAS(1)PEK EEPLS(-251.18)EEEPCT(-88.83)S(-64.78)T(-51.83)AIAS(51.83)PEK 0 0 1 0 B3KN82;Q9Y2X3 B3KN82 B3KN82 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1142.9844 2 1142.48235 2282.95015 56857.02 0.3158 0.0003608 -0.31921 -0.00036469 -0.0034031 -3.888E-06 1142.98382223214 1146.99053223173 81.62 1.2324 81.62 81.003 82.235 0 882 113 11 0 0 0 0 5 43606 356.45 316.58 5 1.1382 1.4078 0 295700000 137420000 158280000 1330 578 678 752 2093;2094;2095;2096;2097 2094 958;959 EEPLSEEEPCTSTAIASPEK 20 1 0 Phospho (STY) _EEPLS(ph)EEEPCTSTAIASPEK_ EEPLS(1)EEEPCTSTAIASPEK EEPLS(91.9)EEEPCT(-91.9)S(-96.95)T(-101.86)AIAS(-118.68)PEK 0 0 1 0 B3KN82;Q9Y2X3 B3KN82 B3KN82 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1142.9846 2 1142.48235 2282.95015 56448.96 0.2156 0.00024632 0.010819 1.2361E-05 0.22642 0.00025869 1142.98417074249 1146.99154315827 87.52 1.1342 87.52 86.93 88.064 0 622 104 8 0 0 0 1.1663E-54 5 47819 140.28 124.68 5 0.55754 0.6943 0 74516000 47984000 26532000 1331 578 678 752 2098;2099;2100;2101;2102 2101 958;959 EEPLSEEEPCTSTAIASPEK 20 1 0 Phospho (STY) _EEPLS(ph)EEEPCTSTAIASPEK_ EEPLS(1)EEEPCTSTAIASPEK EEPLS(67.31)EEEPCT(-68.64)S(-68.32)T(-68.32)AIAS(-67.31)PEK 0 0 1 0 B3KN82;Q9Y2X3 B3KN82 B3KN82 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1142.9847 2 1142.48235 2282.95015 54516.12 0.38772 0.00044296 0.56748 0.00064834 0.9552 0.0010913 1142.98395580503 1146.49109697092 93.292 1.52 93.292 92.445 93.965 -7.6294E-06 893 148 10 0 0 0 1.3489E-13 2 59949 83.253 67.31 5 0.64427 0.4306 0 168270000 109400000 58865000 1332 578 678 752 2103;2104 2103 958;959 EEPLSEEEPCTSTAIASPEK 20 1 0 2 Phospho (STY) _EEPLS(ph)EEEPCTSTAIAS(ph)PEK_ EEPLS(1)EEEPCTSTAIAS(1)PEK EEPLS(94.17)EEEPCT(-56.18)S(-46.59)T(-42.06)AIAS(42.06)PEK 0 0 2 0 B3KN82;Q9Y2X3 B3KN82 B3KN82 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1182.9666 2 1182.46552 2362.91648 55806.04 0.59133 0.00069923 -0.46649 -0.00055161 0.12485 0.00014763 1182.96670771421 1186.47218687771 90.157 1.2681 90.157 89.627 90.895 0 950 112 13 0 0 0 1.7807E-113 4 49756 186.06 167.9 10 0.54347 0.67032 0 1081000000 686200000 394820000 1333 578 678 753 2105;2106;2107;2108 2107 958;959 EEPLSEEEPCTSTAIASPEK 20 1 0 2 Phospho (STY) _EEPLS(ph)EEEPCTSTAIAS(ph)PEK_ EEPLS(1)EEEPCTSTAIAS(0.999)PEK EEPLS(66.47)EEEPCT(-42.44)S(-38.62)T(-34.12)AIAS(34.12)PEK 0 0 2 0 B3KN82;Q9Y2X3 B3KN82 B3KN82 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1182.9674 2 1182.46552 2362.91648 55094.68 0.61295 0.0007248 -0.43878 -0.00051884 0.17417 0.00020595 1182.96683752993 1186.97369787999 100.27 1.5961 100.27 99.75 101.35 0 1301 151 15 0 0 0 1.6067E-22 4 64236 106.02 97.626 10 0.94553 0.63028 0 845700000 426730000 418970000 1334 578 678 753 2109;2110;2111;2112 2110 958;959 EEPLSEEEPCTSTAIASPEKK 21 2 0 Phospho (STY) _EEPLSEEEPCTSTAIAS(ph)PEKK_ EEPLSEEEPCTSTAIAS(1)PEKK EEPLS(-125.72)EEEPCT(-62.53)S(-58.44)T(-53.69)AIAS(53.69)PEKK 0 0 1 1 B3KN82;Q9Y2X3 B3KN82 B3KN82 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 810.3675 3 804.688982 2411.04512 67352.93 0.90487 0.00072814 -0.10234 -8.235E-05 0.80253 0.00064579 805.023322555982 810.366139684853 75.874 1.1266 75.874 75.325 76.452 0 701 96 10 0 0 0 1.1564E-113 3 39366 182.95 175.6 5 1.1424 1.4762 0 137770000 61125000 76646000 1335 578 679 754 2113;2114;2115 2114 958;959 EEPLSEEEPCTSTAIASPEKK 21 2 0 2 Phospho (STY) _EEPLS(ph)EEEPCTSTAIAS(ph)PEKK_ EEPLS(0.999)EEEPCTSTAIAS(0.999)PEKK EEPLS(33.75)EEEPCT(-36.06)S(-33.75)T(-34.37)AIAS(34.37)PEKK 0 0 2 1 B3KN82;Q9Y2X3 B3KN82 B3KN82 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 831.6798 3 831.344426 2491.01145 66282.95 0.92731 0.00077091 -0.14517 -0.00012069 0.78214 0.00065023 831.678753515761 836.687087877309 80.477 1.2496 80.477 79.88 81.13 0 940 113 11 0 0 0 3.0827E-24 3 42787 93.411 88.295 10 0.53679 0.70884 0 297440000 191360000 106080000 1336 578 679 755 2116;2117;2118 2118 958;959 EEPPSPIEATPPQSLLEK 18 1 0 Phospho (STY) _EEPPS(ph)PIEATPPQSLLEK_ EEPPS(0.995)PIEAT(0.004)PPQS(0.001)LLEK EEPPS(24.01)PIEAT(-24.01)PPQS(-29.3)LLEK 0 0 1 0 O75151 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1021.9926 2 1021.49011 2040.96567 60856.02 0.30588 0.00031245 0.32467 0.00033164 0.63054 0.00064409 1021.49029039088 1025.99901132781 110.09 0.77377 110.09 109.67 110.45 -7.6294E-06 408 63 8 0 0 0 0.00015734 1 64658 46.069 46.069 3 1.2975 1.6173 0 72021000 29780000 42240000 1337 934 680 756 2119 2119 1595;2849 EEPPSPIEATPPQSLLEK 18 1 0 2 Phospho (STY) _EEPPS(ph)PIEAT(ph)PPQSLLEK_ EEPPS(1)PIEAT(1)PPQSLLEK EEPPS(81.78)PIEAT(35.69)PPQS(-35.69)LLEK 0 0 2 0 O75151 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1065.9832 2 1061.47328 2120.932 59117.87 0.42631 0.00045252 0.12216 0.00012967 0.54847 0.00058219 1061.97483517197 1065.48054656928 112.21 1.1155 112.21 111.64 112.75 -7.6294E-06 745 100 10 0 0 0 7.0414E-38 3 66726 129.46 116.69 3 1.0965 1.3573 0 205830000 102570000 103260000 1338 934 680 757 2120;2121;2122 2122 1595;2849 EEPPSPPQSPR 11 0 1 Phospho (STY) _EEPPS(ph)PPQSPR_ EEPPS(0.981)PPQS(0.019)PR EEPPS(17.2)PPQS(-17.2)PR 0 0 1 0 B3KNQ9;B3KWP0;B4DTG4;E9PMQ6;Q53HT3;Q00613 B3KNQ9 B3KNQ9 HSF1 Heat shock factor protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 655.7858 2 650.782099 1299.54965 76150.25 0.86246 0.00056128 -0.31446 -0.00020464 0.548 0.00035663 650.782076985402 655.785810504153 45.477 1.3307 45.477 44.727 46.058 0 497 95 7 0 0 0 0.0093039 3 17235 54.343 49.377 2 0.95229 1.1361 0 16310000 7795100 8514700 1339 587 681 758 2123;2124;2125 2125 969 EERPEGSPTLFK 12 1 1 Phospho (STY) _EERPEGS(ph)PTLFK_ EERPEGS(0.996)PT(0.004)LFK EERPEGS(24.21)PT(-24.21)LFK 0 0 1 1 Q7Z5J4 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 735.3375 2 735.337239 1468.65992 70606.76 0.98828 0.00072672 -0.038742 -2.8488E-05 0.94954 0.00069823 735.336972478617 744.348413125249 80.099 1.6615 80.099 79.063 80.725 0 678 152 6 0 0 0 2.9722E-25 4 42332 139.78 95.884 2 0.59587 0.70867 0 73315000 41827000 31488000 1340 1137 682 759 2126;2127;2128;2129 2128 2177 EERPEGSPTLFK 12 1 1 Phospho (STY) _EERPEGS(ph)PTLFK_ EERPEGS(0.991)PT(0.009)LFK EERPEGS(20.46)PT(-20.46)LFK 0 0 1 1 Q7Z5J4 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 744.3485 2 735.337239 1468.65992 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.241 1 63.241 62.741 63.741 -7.6294E-06 0 0 0 0.0001273 1 39360 67.519 30.375 2 1341 1137 682 759 2130 2130 2177 EESEADHSKRK 11 2 1 Phospho (STY) _EES(ph)EADHSKRK_ EES(1)EADHSKRK EES(39.99)EADHS(-39.99)KRK 0 0 1 2 REV__C9JU34 REV__C9JU34 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 711.3193 2 698.298645 1394.58274 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.406 1 71.406 70.906 71.906 0 0 0 0 0.034885 1 35863 45.829 26.435 2 + 1342 1258 683 760 2131 2131 2596 EESFTSLEVR 10 0 1 Phospho (STY) _EES(ph)FTSLEVR_ EES(0.972)FT(0.024)S(0.004)LEVR EES(16.14)FT(-16.14)S(-23.85)LEVR 0 0 1 0 A4LAA3;A0A096LNL9;A0A096LNW1 A4LAA3 A4LAA3 ATRX ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 638.778 2 638.776483 1275.53841 NaN NaN NaN 0.28153 0.00017984 NaN NaN NaN NaN 93.311 0.20018 93.311 93.156 93.356 -7.6294E-06 0 0 0 0.013963 1 51973 53.327 37.957 3 NaN NaN 0 4692000 4692000 0 1343 422 684 761 2132 2132 716 EESFTSLEVR 10 0 1 Phospho (STY) _EES(ph)FTSLEVR_ EES(0.939)FT(0.057)S(0.004)LEVR EES(12.16)FT(-12.16)S(-23.92)LEVR 0 0 1 0 A4LAA3;A0A096LNL9;A0A096LNW1 A4LAA3 A4LAA3 ATRX MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 643.7823 2 638.776483 1275.53841 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.487 1 93.487 92.987 93.987 0 0 0 0 0.0042857 1 52118 56.916 29.485 3 1344 422 684 761 2133 2133 716 EESGKPGAHVTVK 13 2 0 Unmodified _EESGKPGAHVTVK_ 0 0 0 1 I6L957;A0A087WUI2;A0A024RA28;P22626 I6L957 I6L957 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 446.9046 3 446.905253 1337.69393 89527.29 -0.04011 -1.7925E-05 -0.10709 -4.7861E-05 -0.1472 -6.5786E-05 446.905206483529 452.248049706211 73.691 2.3074 73.691 72.82 75.128 0 914 203 8 0 0 0 0.025222 1 38207 24.964 11.53 1 2.355 3.1233 0 347280000 100300000 246980000 1345 177 685 762 2134 2134 EETEIIEGEVVEIQIDRPATGTGSK 25 1 1 Unmodified _EETEIIEGEVVEIQIDRPATGTGSK_ 0 0 0 1 M0R0Y3;B3KNL2;Q9Y230;B4DW30;X6R2L4 M0R0Y3 M0R0Y3 RUVBL2 RuvB-like 2 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 900.3999 3 900.790655 2699.35013 68863.23 0.71434 0.00064347 0.10746 9.6801E-05 0.8218 0.00074027 901.125310778692 907.132173428887 145.36 0.2336 145.36 145.27 145.5 0 18 5 5 0 0 0 1.9188E-18 1 83700 65.833 65.833 1 0.58371 0.63273 0 7450900 3433400 4017500 1346 585 686 763 2135 2135 EETVGIFSPLSVK 13 1 0 Phospho (STY) _EETVGIFS(ph)PLSVK_ EETVGIFS(0.968)PLS(0.032)VK EET(-65.52)VGIFS(14.84)PLS(-14.84)VK 0 0 1 0 H7C2W2;A0A0D9SFM0;Q149N8 H7C2W2 H7C2W2 SHPRH E3 ubiquitin-protein ligase SHPRH MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 747.3732 2 743.365465 1484.71638 71100.84 0.8465 0.00062926 -0.086178 -6.4062E-05 0.76032 0.0005652 743.365179215957 747.372594283236 123.02 0.79565 123.02 122.6 123.4 0 359 68 7 0 0 0 3.4976E-16 2 74270 119.87 99.76 3 0.83428 1.0507 0 29574000 16160000 13414000 1347 333 687 764 2136;2137 2137 525 EETVNDPEEAGHR 13 0 1 Unmodified _EETVNDPEEAGHR_ 0 0 0 0 A8K9K6;O00567;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 494.8866 3 494.886698 1481.63826 86726.81 0.48986 0.00024242 -0.198 -9.7988E-05 0.29186 0.00014444 494.886706863368 498.222648424632 56.206 0.84884 56.206 55.741 56.589 0 465 70 10 0 0 0 0.0058025 2 24051 37.613 30.347 1 0.76567 0.96749 0 153150000 86144000 67007000 1348 504 688 765 2138;2139 2138 EETVNDPEEAGHR 13 0 1 Unmodified _EETVNDPEEAGHR_ 0 0 0 0 A8K9K6;O00567;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 741.8278 2 741.826409 1481.63826 71251.2 0.91092 0.00067574 0.27802 0.00020624 1.1889 0.00088199 741.826725703796 746.830599499318 56.194 0.69073 56.194 55.836 56.526 0 248 56 6 0 0 0 1.0362E-15 1 24264 136.02 125.41 1 0.85734 1.0598 0 33558000 18380000 15178000 1349 504 688 765 2140 2140 EEVGEEAIVELVENGK 16 1 0 Unmodified _EEVGEEAIVELVENGK_ 0 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;B4E3S1;B1AH99;Q5BKV1 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 876.4396 2 872.435989 1742.85742 NaN NaN NaN NaN NaN NaN NaN NaN NaN 126.16 1 126.16 125.66 126.66 0 0 0 0 0.0064315 1 76481 41.54 27.121 1 1350 49 689 766 2141 2141 EEVGINTETSSAERK 15 1 1 Phospho (STY) _EEVGINTETS(ph)SAERK_ EEVGINTET(0.029)S(0.739)S(0.231)AERK EEVGINT(-45.91)ET(-14.02)S(5.05)S(-5.05)AERK 0 0 1 1 Q14191;Q59F09 Q14191 Q14191 WRN Werner syndrome ATP-dependent helicase MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 583.2676 3 577.259523 1728.75674 78974.89 0.75334 0.00043487 0.015951 9.2076E-06 0.76929 0.00044408 577.259736824628 583.266807668481 56.382 0.79649 56.382 55.973 56.77 0 359 64 7 0 0 0 1.3373E-19 1 24277 119.08 107.7 4 0.87316 1.0311 0 46162000 26465000 19698000 1351 1055 690 767 2142 2142 1966;1967;2922 EEVGINTETSSAERK 15 1 1 Phospho (STY) _EEVGINT(ph)ETSSAERK_ EEVGINT(0.311)ET(0.23)S(0.23)S(0.23)AERK EEVGINT(1.32)ET(-1.32)S(-1.32)S(-1.32)AERK 0 0 1 1 Q14191;Q59F09 Q14191 Q14191 WRN Werner syndrome ATP-dependent helicase MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 874.3973 2 865.385646 1728.75674 66146.74 0.83485 0.00072247 -0.0095793 -8.2898E-06 0.82527 0.00071418 865.386146736245 874.396930846384 56.409 0.76002 56.409 55.945 56.705 3.8147E-06 256 61 6 0 0 0 0.0017276 1 24314 57.804 28.476 4 0.75849 0.8712 0 25017000 14017000 11000000 1352 1055 690 767 2143 2143 1966;1967;2922 EEVGINTETSSAERK 15 1 1 Phospho (STY) _EEVGINTETS(ph)SAERK_ EEVGINTET(0.023)S(0.488)S(0.488)AERK EEVGINT(-41.4)ET(-13.2)S(0)S(0)AERK 0 0 1 1 Q14191;Q59F09 Q14191 Q14191 WRN Werner syndrome ATP-dependent helicase MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 865.8882 2 865.385646 1728.75674 64562.54 1.0766 0.00093167 -0.0037942 -3.2835E-06 1.0728 0.00092838 865.385735532838 874.396955070893 33.191 0.89713 33.191 32.931 33.828 0 330 50 9 0 0 0 2.9143E-24 1 17985 126.16 100.03 4 0.79746 0.61537 0 80208000 43749000 36460000 1353 1055 690 767 2144 2144 1966;1967;2922 EEVGINTETSSAERK 15 1 1 Phospho (STY) _EEVGINTETS(ph)SAERK_ EEVGINTET(0.065)S(0.688)S(0.247)AERK EEVGINT(-43.01)ET(-10.25)S(4.45)S(-4.45)AERK 0 0 1 1 Q14191;Q59F09 Q14191 Q14191 WRN Werner syndrome ATP-dependent helicase ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 577.2596 3 577.259523 1728.75674 NaN NaN NaN 0.97771 0.00056439 NaN NaN NaN NaN 33.183 0.88152 33.183 32.92 33.802 0 0 0 0 1.3944E-18 1 18002 109.13 88.562 4 NaN NaN 0 65115000 65115000 0 1354 1055 690 767 2145 2145 1966;1967;2922 EEVSPEAVGVTSQR 14 0 1 Phospho (STY) _EEVS(ph)PEAVGVTSQR_ EEVS(1)PEAVGVTSQR EEVS(73.87)PEAVGVT(-73.87)S(-77.95)QR 0 0 1 0 B4DYZ9;A0A024R784;O15164;Q6ZSA6 B4DYZ9 B4DYZ9 TRIM24 Transcription intermediary factor 1-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 789.36 2 784.353617 1566.69268 71562.71 0.6911 0.00054207 0.37495 0.0002941 1.0661 0.00083616 784.354268161721 789.357811226647 67.086 0.43601 67.086 66.741 67.177 0 77 32 5 0 0 0 5.2364E-08 1 32901 94.673 84.302 3 1.1936 1.4344 0 18048000 9279800 8767900 1355 130 691 768 2146 2146 193 EEVVGGDDSDGLR 13 0 1 Phospho (STY) _EEVVGGDDS(ph)DGLR_ EEVVGGDDS(1)DGLR EEVVGGDDS(62.89)DGLR 0 0 1 0 P25490 P25490 P25490 YY1 Transcriptional repressor protein YY1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 714.2894 2 714.287943 1426.56133 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.867 1 59.867 59.367 60.367 0 0 0 0 0.00011062 1 27001 62.891 48.927 1 1356 977 692 769 2147 2147 1730 EFAAALTAER 10 0 1 Phospho (STY) _EFAAALT(ph)AER_ EFAAALT(1)AER EFAAALT(51.13)AER 0 0 1 0 Q75MP9;F2YMM1;Q75MQ0;S4S3R8;A0A090N8E9;Q15910;B7Z8K5 Q75MP9 Q75MP9 EZH2 Histone-lysine N-methyltransferase EZH2 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 579.7643 2 579.763178 1157.5118 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.9 1 78.9 78.4 79.4 -7.6294E-06 0 0 0 0.033113 1 50424 51.135 37.781 1 1357 278 693 770 2148 2148 2675 EFNAEVHR 8 0 1 Unmodified _EFNAEVHR_ 0 0 0 0 B3KTM6;A2RUM7;Q59GX9;P46777 B3KTM6 B3KTM6 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 337.8343 3 334.498157 1000.47264 103301.6 -0.36171 -0.00012099 0.3841 0.00012848 0.022394 7.4907E-06 334.49822702836 337.834297984795 67.037 0.79826 67.037 66.809 67.608 0 285 66 6 0 0 0 0.0062364 1 32713 51.346 43.421 1 0.97228 1.2278 0 107040000 57506000 49538000 1358 409 694 771 2149 2149 EFNAEVHR 8 0 1 Unmodified _EFNAEVHR_ 0 0 0 0 B3KTM6;A2RUM7;Q59GX9;P46777 B3KTM6 B3KTM6 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 506.2477 2 501.243598 1000.47264 85036.17 0.40365 0.00020233 -0.1094 -5.4838E-05 0.29425 0.00014749 501.243440207372 506.247617105108 67.041 0.94643 67.041 66.771 67.718 0 440 79 8 0 0 0 2.9977E-17 2 32720 155.88 126.98 1 0.95224 1.205 0 351600000 180400000 171210000 1359 409 694 771 2150;2151 2150 EFNAEVHR 8 0 1 Unmodified _EFNAEVHR_ 0 0 0 0 B3KTM6;A2RUM7;Q59GX9;P46777 B3KTM6 B3KTM6 RPL5 60S ribosomal protein L5 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 506.2478 2 501.243598 1000.47264 85021.14 0.16632 8.3369E-05 0.21843 0.00010949 0.38475 0.00019285 501.243586892809 506.247762449944 21.333 0.28561 21.333 21.194 21.48 0 50 11 7 0 0 0 0.024777 1 8133 69.198 58.325 1 0.88873 0.70137 0 13856000 7757200 6099100 1360 409 694 771 2152 2152 EFNAEVHRK 9 1 1 Unmodified _EFNAEVHRK_ 0 0 0 1 B3KTM6;A2RUM7;Q59GX9;P46777 B3KTM6 B3KTM6 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 377.1968 3 377.196478 1128.56761 95562.49 0.10692 4.0332E-05 -0.13802 -5.206E-05 -0.031092 -1.1728E-05 377.196288677079 383.203926873043 81.021 2.0372 81.021 80.473 82.51 0 617 189 7 0 0 0 0.003765 4 42828 54.982 41.212 1 1.0649 1.2806 0 172440000 85142000 87301000 1361 409 695 772 2153;2154;2155;2156 2153 EFNAEVHRK 9 1 1 Unmodified _EFNAEVHRK_ 0 0 0 1 B3KTM6;A2RUM7;Q59GX9;P46777 B3KTM6 B3KTM6 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 565.2918 2 565.291079 1128.56761 81166.82 0.68359 0.00038643 -0.11901 -6.7274E-05 0.56458 0.00031915 565.290938138876 574.302347068419 81.161 1.8826 81.161 80.545 82.427 0 844 174 7 0 0 0 1.6002E-50 4 43528 186.91 153.47 1 0.80151 0.9633 0 164410000 93029000 71384000 1362 409 695 772 2157;2158;2159;2160 2159 EFNAEVHRK 9 1 1 Unmodified _EFNAEVHRK_ 0 0 0 1 B3KTM6;A2RUM7;Q59GX9;P46777 B3KTM6 B3KTM6 RPL5 60S ribosomal protein L5 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 383.204 3 377.196478 1128.56761 NaN NaN NaN -0.073753 -2.7819E-05 NaN NaN NaN NaN 81.515 1.1476 81.515 81.325 82.473 0 0 0 0 0.019692 2 43457 38.303 25.212 1 NaN NaN 0 65099000 0 65099000 1363 409 695 772 2161;2162 2161 EFPITEAVGSDK 12 1 0 Phospho (STY) _EFPITEAVGS(ph)DK_ EFPITEAVGS(1)DK EFPIT(-79.13)EAVGS(79.13)DK 0 0 1 0 Q6P0N0;H0YJM1 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 690.813 2 686.80524 1371.59593 73600.24 1.1145 0.00076544 -0.060673 -4.1671E-05 1.0538 0.00072377 686.805133711322 690.81222206322 96.24 1.4737 96.24 95.388 96.862 0 575 127 7 0 0 0 4.2817E-20 4 54244 136.3 114.06 2 0.53396 0.66234 0 115760000 71744000 44016000 1364 1120 696 773 2163;2164;2165;2166 2166 2127 EFPITEAVGSDK 12 1 0 Phospho (STY) _EFPITEAVGS(ph)DK_ EFPITEAVGS(1)DK EFPIT(-38.01)EAVGS(38.01)DK 0 0 1 0 Q6P0N0;H0YJM1 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 686.8055 2 686.80524 1371.59593 73032.66 1.086 0.00074586 -0.22779 -0.00015645 0.85819 0.00058941 686.805052054332 690.812188435372 99.941 1.4206 99.941 99.444 100.86 0 809 136 9 0 0 0 0.00011451 4 64485 89.624 74.957 2 1.1279 0.74352 0 60587000 27753000 32834000 1365 1120 696 773 2167;2168;2169;2170 2169 2127 EFTEAVEAK 9 1 0 Unmodified _EFTEAVEAK_ 0 0 0 0 C9JZ20;A8K9G2;E7ESE2;E9PCW0;C9JW96;Q6PUJ7;Q6FHP5;Q53FV0;A8K401;P35232 C9JZ20 C9JZ20 PHB;HEL-S-54e Prohibitin ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 516.2606 2 512.253297 1022.49204 NaN NaN NaN 0.22703 0.0001163 NaN NaN NaN NaN 63.547 0.29269 63.547 63.398 63.691 0 0 0 0 0.0019744 1 29964 73.665 44.092 1 NaN NaN 0 4701100 0 4701100 1366 456 697 774 2171 2171 EFVEAVLELR 10 0 1 Unmodified _EFVEAVLELR_ 0 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 602.8337 2 602.832246 1203.64994 84277.95 0.78017 0.00047031 0.15622 9.4173E-05 0.93638 0.00056448 602.832588721237 607.836253954607 123.2 0.23666 123.2 123.07 123.3 -7.6294E-06 55 22 4 0 0 0 0.0022951 1 74524 83.783 73.073 1 1.0313 1.129 0 6366400 2181000 4185500 1367 935 698 775 2172 2172 EFVEAVLELR 10 0 1 Unmodified _EFVEAVLELR_ 0 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 602.8324 2 602.832246 1203.64994 NaN NaN NaN 0.15498 9.3427E-05 NaN NaN NaN NaN 123.95 0.20419 123.95 123.88 124.08 0 0 0 0 4.9303E-15 1 75073 128.38 79.88 1 NaN NaN 0 5190400 5190400 0 1368 935 698 775 2173 2173 EFVEAVLELR 10 0 1 Unmodified _EFVEAVLELR_ 0 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 602.8324 2 602.832246 1203.64994 NaN NaN NaN NaN NaN NaN NaN NaN NaN 125.05 1 125.05 124.55 125.55 0 0 0 0 0.015525 1 75801 56.729 29.205 1 1369 935 698 775 2174 2174 EFVEAVLELR 10 0 1 Unmodified _EFVEAVLELR_ 0 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 602.8323 2 602.832246 1203.64994 79626.96 0.96412 0.0005812 0.15788 9.5172E-05 1.122 0.00067638 602.832225563522 607.836442496534 125.91 0.73799 125.91 125.55 126.29 7.6294E-06 220 65 5 0 0 0 0.029837 1 81246 55.461 44.31 1 1.1291 0.91363 0 7255900 3138600 4117300 1370 935 698 775 2175 2175 EGDVEEPTDDSLPTTGDAGGREPMEEK 27 1 1 Oxidation (M),Phospho (STY) _EGDVEEPTDDS(ph)LPTTGDAGGREPM(ox)EEK_ EGDVEEPTDDSLPTTGDAGGREPM(1)EEK EGDVEEPT(0.113)DDS(0.723)LPT(0.082)T(0.082)GDAGGREPMEEK EGDVEEPTDDSLPTTGDAGGREPM(51.76)EEK EGDVEEPT(-8.06)DDS(8.06)LPT(-9.44)T(-9.44)GDAGGREPMEEK 0 1 1 1 Q9UKN8 Q9UKN8 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 986.7366 3 986.400777 2956.1805 61329.64 0.6077 0.00059944 0.10894 0.00010746 0.71665 0.0007069 986.735494874669 992.743185378523 67.516 0.66533 67.516 67.189 67.854 0 327 57 7 0 0 0 6.2739E-10 1 42249 51.758 44.806 4 0.46343 0.35729 0 47740000 32722000 15018000 1371 1236 699 776 2176 2176 357 2530 EGDVLTLLESER 12 0 1 Unmodified _EGDVLTLLESER_ 0 0 0 0 B2R4R9;P62857 B2R4R9 B2R4R9 RPS28 40S ribosomal protein S28 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 685.8568 2 680.851364 1359.68817 NaN NaN NaN NaN NaN NaN NaN NaN NaN 119.83 1 119.83 119.33 120.33 0 0 0 0 0.00087651 1 72092 60.518 44.856 1 1372 529 700 777 2177 2177 EGEDSSVIHYDDK 13 1 0 Phospho (STY) _EGEDS(ph)SVIHYDDK_ EGEDS(0.573)S(0.427)VIHYDDK EGEDS(1.28)S(-1.28)VIHY(-64.68)DDK 0 0 1 0 B3KY63;F5GWX5;A0A0C4DGG9;Q14839 B3KY63 B3KY63 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 787.3071 2 787.306333 1572.59811 70321.2 0.77802 0.00061254 -0.27183 -0.00021401 0.50619 0.00039853 787.306647213411 791.814066494856 61.929 1.1386 61.929 61.393 62.531 3.8147E-06 295 81 6 0 0 0 2.171E-07 1 28969 100.22 92.467 3 1.0093 1.2359 0 20208000 11413000 8795000 1373 324 701 778 2178 2178 508 EGEDSSVIHYDDK 13 1 0 Unmodified _EGEDSSVIHYDDK_ 0 0 0 0 B3KY63;F5GWX5;A0A0C4DGG9;Q14839 B3KY63 B3KY63 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 501.2222 3 498.551204 1492.63178 85974.3 0.40999 0.0002044 -0.27747 -0.00013833 0.13251 6.6065E-05 498.551079774411 501.222420762993 72.946 0.92406 72.946 72.388 73.312 0 361 77 6 0 0 0 0.00017541 3 37124 78.486 68.698 1 0.79504 0.9992 0 53901000 29283000 24618000 1374 324 701 779 2179;2180;2181 2181 EGEEPTVYSDEEEPK 15 1 0 Phospho (STY) _EGEEPTVYS(ph)DEEEPK_ EGEEPT(0.003)VY(0.004)S(0.993)DEEEPK EGEEPT(-25.19)VY(-23.83)S(23.83)DEEEPK 0 0 1 0 Q6IB11;O00264 Q6IB11 Q6IB11 PGRMC1 Membrane-associated progesterone receptor component 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 913.8631 2 909.353677 1816.6928 64540.07 0.71535 0.0006505 -0.1365 -0.00012413 0.57884 0.00052637 909.353619919498 913.360758635141 59.24 1.1478 59.24 58.703 59.85 3.8147E-06 571 91 9 0 0 0 3.2514E-12 3 26322 102.38 96.406 3 0.75774 0.93877 0 140480000 78436000 62045000 1375 916 702 780 2182;2183;2184 2182 1537 EGEEPTVYSDEEEPKDESAR 20 1 1 Phospho (STY) _EGEEPTVYS(ph)DEEEPKDESAR_ EGEEPT(0.006)VY(0.013)S(0.973)DEEEPKDES(0.008)AR EGEEPT(-22.18)VY(-18.67)S(18.67)DEEEPKDES(-20.83)AR 0 0 1 1 Q6IB11;O00264 Q6IB11 Q6IB11 PGRMC1 Membrane-associated progesterone receptor component 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 793.6535 3 792.651473 2374.93259 68672.95 0.91328 0.00072391 -0.077639 -6.1541E-05 0.83564 0.00066237 792.65159084288 798.993495603815 47.754 1.4592 47.754 46.82 48.279 0 880 136 10 0 0 0 2.7775E-05 1 28739 44.167 38.326 4 0.69503 0.53634 0 81572000 48980000 32593000 1376 916 703 781 2185 2185 1537 EGGTASVATGPDSPSPVPLPPGK 23 1 0 2 Phospho (STY) _EGGTASVATGPDS(ph)PS(ph)PVPLPPGK_ EGGTASVAT(0.05)GPDS(0.952)PS(0.998)PVPLPPGK EGGT(-42.97)AS(-47.69)VAT(-12.93)GPDS(12.93)PS(26.92)PVPLPPGK 0 0 2 0 Q6SPF0;F8WDT5;E9PIW9 Q6SPF0 Q6SPF0 SAMD1 Atherin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1144.0127 2 1139.50564 2276.99672 56808.19 0.71916 0.00081949 -0.22964 -0.00026168 0.48952 0.00055781 1140.0071098608 1143.51220446604 97.086 1.8919 97.086 96.121 98.012 0 1071 157 8 0 0 0 4.8431E-45 3 54832 122.35 112.56 10 0.75484 0.93408 0 241960000 130900000 111060000 1377 1126 704 782 2186;2187;2188 2188 2145;2146;2957 EGGTASVATGPDSPSPVPLPPGK 23 1 0 2 Phospho (STY) _EGGTASVATGPDS(ph)PS(ph)PVPLPPGK_ EGGTASVATGPDS(1)PS(1)PVPLPPGK EGGT(-50.31)AS(-55.67)VAT(-36.25)GPDS(36.25)PS(53.85)PVPLPPGK 0 0 2 0 Q6SPF0;F8WDT5;E9PIW9 Q6SPF0 Q6SPF0 SAMD1 Atherin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1144.0139 2 1139.50564 2276.99672 56378.39 0.70263 0.00080065 -0.027435 -3.1262E-05 0.67519 0.00076939 1140.00727968267 1144.01415447036 106.65 1.9399 106.65 105.76 107.7 0 1199 185 10 0 0 0 3.9385E-45 1 68632 123.6 107.48 10 1.4469 0.96565 0 113020000 47072000 65944000 1378 1126 704 782 2189 2189 2145;2146;2957 EGGTASVATGPDSPSPVPLPPGK 23 1 0 Phospho (STY) _EGGT(ph)ASVATGPDSPSPVPLPPGK_ EGGT(0.683)AS(0.025)VAT(0.004)GPDS(0.217)PS(0.071)PVPLPPGK EGGT(4.98)AS(-14.31)VAT(-22.54)GPDS(-4.98)PS(-9.82)PVPLPPGK 0 0 1 0 Q6SPF0;F8WDT5;E9PIW9 Q6SPF0 Q6SPF0 SAMD1 Atherin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1104.0326 2 1099.52247 2197.03039 59087.58 0.65083 0.0007156 -0.10881 -0.00011964 0.54201 0.00059596 1100.02402976186 1104.03084749376 97.776 1.9509 97.776 96.813 98.764 0 1193 161 10 0 0 0 1.5727E-06 2 55031 52.731 52.731 5 0.93404 1.1565 0 183400000 94817000 88585000 1379 1126 704 783 2190;2191 2190 2145;2146;2957 EGGTASVATGPDSPSPVPLPPGK 23 1 0 Phospho (STY) _EGGTASVATGPDS(ph)PSPVPLPPGK_ EGGT(0.075)AS(0.092)VAT(0.106)GPDS(0.691)PS(0.036)PVPLPPGK EGGT(-9.63)AS(-8.77)VAT(-8.15)GPDS(8.15)PS(-12.85)PVPLPPGK 0 0 1 0 Q6SPF0;F8WDT5;E9PIW9 Q6SPF0 Q6SPF0 SAMD1 Atherin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1100.0248 2 1099.52247 2197.03039 59065.95 0.67604 0.00074332 -0.16845 -0.00018522 0.50759 0.0005581 1100.02386559331 1104.0306953521 103.71 2.1252 103.71 102.79 104.91 0 1607 208 10 0 0 0 2.8423E-15 1 66962 78.708 78.708 5 1.5473 1.0345 0 139520000 53479000 86039000 1380 1126 704 783 2192 2192 2145;2146;2957 EGHSLEMENENLVENGADSDEDDNSFLK 28 1 0 Oxidation (M),Phospho (STY) _EGHSLEM(ox)ENENLVENGADS(ph)DEDDNSFLK_ EGHSLEM(1)ENENLVENGADSDEDDNSFLK EGHSLEMENENLVENGADS(0.987)DEDDNS(0.013)FLK EGHSLEM(80.66)ENENLVENGADSDEDDNSFLK EGHS(-69.91)LEMENENLVENGADS(18.86)DEDDNS(-18.86)FLK 0 1 1 0 B4DN52;Q53GG0;Q9UHB6;F8VQE1;F8VS07;B3KTW2 B4DN52 B4DN52 LIMA1 LIM domain and actin-binding protein 1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1081.4343 3 1078.4294 3232.26636 NaN NaN NaN -0.53205 -0.00057378 NaN NaN NaN NaN 104.1 1.1724 104.1 103.65 104.82 0 0 0 0 1.3811E-25 1 60510 80.664 66.772 3 NaN NaN 0 269770000 0 269770000 1381 644 705 784 2193 2193 163 1062 EGHSLEMENENLVENGADSDEDDNSFLK 28 1 0 Phospho (STY) _EGHSLEMENENLVENGADS(ph)DEDDNSFLK_ EGHSLEMENENLVENGADS(0.763)DEDDNS(0.237)FLK EGHS(-41.66)LEMENENLVENGADS(5.08)DEDDNS(-5.08)FLK 0 0 1 0 B4DN52;Q53GG0;Q9UHB6;F8VQE1;F8VS07;B3KTW2 B4DN52 B4DN52 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1076.1039 3 1073.09776 3216.27144 58791.66 0.88428 0.00094892 -1.4196 -0.0015234 -0.53536 -0.00057449 1073.43185137372 1076.10233750915 111.29 0.58157 111.29 110.98 111.56 0 282 55 7 0 0 0 1.5569E-07 1 71568 43.612 43.612 3 4.2814 2.8907 0 26158000 5278800 20879000 1382 644 705 785 2194 2194 1062 EGLELPEDEEEK 12 1 0 Unmodified _EGLELPEDEEEK_ 0 0 0 0 A0A024RD80;P08238;B4DMA2;B4DGL0;Q58FF7;Q9H6X9;A8K3W9;Q58FF6;Q2VPJ6;K9JA46;P07900;Q8TBA7;Q86U12;O75322;Q96HX7;Q58FG0 A0A024RD80;Q2VPJ6 A0A024RD80 HSP90AB1;HSP90AB3P;HSP90AB4P;HSP90AA1;EL52;HSP90AA5P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4;Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 712.8295 2 708.822469 1415.63038 NaN NaN NaN -0.37718 -0.00026735 NaN NaN NaN NaN 80.503 0.4646 80.503 80.208 80.673 0 0 0 0 0.0023216 1 42550 74.841 39.3 1 NaN NaN 0 9822900 0 9822900 1383 223;906 706 786 2195 2195 EGLISQDGSSLEALLR 16 0 1 Phospho (STY) _EGLISQDGS(ph)SLEALLR_ EGLIS(0.007)QDGS(0.496)S(0.496)LEALLR EGLIS(-18.24)QDGS(0)S(0)LEALLR 0 0 1 0 A0A024R582;J3KMZ8;Q92785 A0A024R582 A0A024R582 DPF2 Zinc finger protein ubi-d4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 884.4312 2 884.429856 1766.84516 69854.7 0.88102 0.0007792 0.48033 0.00042482 1.3613 0.001204 884.93228943919 889.43465307529 129.33 0.44185 129.33 129.1 129.54 0 57 36 4 0 0 0 0.00029217 1 78624 48.177 36.311 3 0.63525 0.68819 0 3276600 1790300 1486300 1384 105 707 787 2196 2196 139;140 EGPYSISVLYGDEEVPRSPFK 21 1 1 Phospho (STY) _EGPYSISVLYGDEEVPRS(ph)PFK_ EGPYSIS(0.001)VLYGDEEVPRS(0.999)PFK EGPY(-44.38)S(-41.83)IS(-32.25)VLY(-33.76)GDEEVPRS(32.25)PFK 0 0 1 1 Q5HY54;Q60FE6;Q60FE5;P21333;A6NDY9;A0A087WWY3;Q8TES4 Q5HY54 Q5HY54 FLNA;FLJ00119 Filamin-A ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 823.3912 3 817.048951 2448.12502 NaN NaN NaN 0.13805 0.00011279 NaN NaN NaN NaN 125.25 0.66934 125.25 124.95 125.62 7.6294E-06 0 0 0 0.0001434 1 80874 44.596 32.516 5 NaN NaN 0 36150000 0 36150000 1385 973 708 788 2197 2197 1728 EGRPSGEAFVELESEDEVK 19 1 1 Phospho (STY) _EGRPSGEAFVELES(ph)EDEVK_ EGRPSGEAFVELES(1)EDEVK EGRPS(-71.42)GEAFVELES(71.42)EDEVK 0 0 1 1 G8JLB6;P31943;E9PCY7;D6RIU0;D6RBM0;E7EQJ0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;E7EN40;D6RDU3;D6RJ04;D6RIH9;D6RDL0 G8JLB6 G8JLB6 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 735.9988 3 729.654489 2185.94164 74461.9 2.0492 0.0014952 0.0036253 2.6452E-06 2.0529 0.0014979 729.654669273638 735.662106523947 100.28 0.66391 100.28 99.981 100.64 -7.6294E-06 234 50 7 0 0 0 1.2186E-10 3 57300 79.416 74.866 2 1.2525 1.4611 0 33099000 15509000 17590000 1386 844 709 789 2198;2199;2200 2198 1447;1448 EGRPSGEAFVELESEDEVK 19 1 1 Phospho (STY) _EGRPS(ph)GEAFVELESEDEVK_ EGRPS(1)GEAFVELESEDEVK EGRPS(113.86)GEAFVELES(-113.86)EDEVK 0 0 1 1 G8JLB6;P31943;E9PCY7;D6RIU0;D6RBM0;E7EQJ0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;E7EN40;D6RDU3;D6RJ04;D6RIH9;D6RDL0 G8JLB6 G8JLB6 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 735.6638 3 729.654489 2185.94164 69312.53 1.6413 0.0011976 1.37 0.00099963 3.0113 0.0021972 729.989101417389 735.662032903808 101.98 1.2938 101.98 101.47 102.77 0 201 103 5 0 0 0 1.1204E-37 1 58700 127.97 118.39 2 1.4408 1.6833 0 34507000 10954000 23552000 1387 844 709 789 2201 2201 1447;1448 EGRPSGEAFVELESEDEVK 19 1 1 Phospho (STY) _EGRPS(ph)GEAFVELESEDEVK_ EGRPS(1)GEAFVELESEDEVK EGRPS(44.81)GEAFVELES(-44.81)EDEVK 0 0 1 1 G8JLB6;P31943;E9PCY7;D6RIU0;D6RBM0;E7EQJ0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;E7EN40;D6RDU3;D6RJ04;D6RIH9;D6RDL0 G8JLB6 G8JLB6 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 729.6547 3 729.654489 2185.94164 NaN NaN NaN NaN NaN NaN NaN NaN NaN 101.62 1 101.62 101.12 102.12 0 0 0 0 0.00036486 1 58459 52.898 38.324 2 1388 844 709 789 2202 2202 1447;1448 EGSEFSFSDGEVAEK 15 1 0 Phospho (STY) _EGS(ph)EFSFSDGEVAEK_ EGS(0.973)EFS(0.005)FS(0.021)DGEVAEK EGS(16.58)EFS(-22.61)FS(-16.58)DGEVAEK 0 0 1 0 Q9NVB0;Q9BVS4 Q9NVB0 Q9NVB0 RIOK2 Serine/threonine-protein kinase RIO2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 849.3336 2 849.332547 1696.65054 NaN NaN NaN 0.688 0.00058434 NaN NaN NaN NaN 93.448 0.55067 93.448 93.168 93.719 -7.6294E-06 0 0 0 0.00015248 1 52007 62.035 51.803 3 NaN NaN 0 7075000 7075000 0 1389 1200 710 790 2203 2203 2389 EGTSVLEHTSDGFPENK 17 1 0 Unmodified _EGTSVLEHTSDGFPENK_ 0 0 0 0 H0Y8P4;Q8TED0 H0Y8P4 H0Y8P4 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 618.9582 3 616.286639 1845.83809 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.719 1 87.719 87.219 88.219 0 0 0 0 0.0041246 1 47754 49.559 39.22 1 1390 853 711 791 2204 2204 EGVEHQLR 8 0 1 Unmodified _EGVEHQLR_ 0 0 0 0 J3KTD6;Q96GD4;J3QR41;J3QLN8;B2RC06;J3KT86 J3KTD6 J3KTD6 AURKB Aurora kinase B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 326.5058 3 323.170041 966.488293 106678 -0.48074 -0.00015536 -0.07376 -2.3837E-05 -0.5545 -0.0001792 323.17000158486 326.506079250041 66.832 0.2121 66.832 66.725 66.937 0 51 14 5 0 0 0 0.018003 1 32706 35.295 10.372 1 0.94599 1.1628 0 29418000 14834000 14585000 1391 893 712 792 2205 2205 EGVVGPELHHK 11 1 0 Unmodified _EGVVGPELHHK_ 0 0 0 0 Q15149;D3DWL0 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 401.2155 3 401.21565 1200.62512 95380.15 -0.046246 -1.8554E-05 0.8007 0.00032125 0.75445 0.0003027 401.215921025515 403.88724381739 95.414 1.0594 95.414 94.726 95.786 0 360 92 5 0 0 0 0.0053713 4 53731 48.004 35.492 1 1.8106 2.2607 0 67834000 26027000 41807000 1392 1070 713 793 2206;2207;2208;2209 2209 EHALLAYTLGVK 12 1 0 Unmodified _EHALLAYTLGVK_ 0 0 0 0 A0A087WV01;Q9H2I7;Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q53GE9;Q53GA1;Q5VTE0;P68104;A9X7H1;Q96RE1;B4DV42;Q9NZS6;Q53G85;A8K9C4;Q8IUB0;Q53HR1;Q16577;Q05639;Q59GP5;Q53G89 A0A087WV01 A0A087WV01 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 661.8824 2 657.874445 1313.73434 74881.63 0.75676 0.00049785 0.052233 3.4363E-05 0.80899 0.00053222 657.874473687686 661.881544845517 145.88 0.58357 145.88 145.5 146.09 0 153 30 8 0 0 0 6.9418E-09 1 83966 123.79 123.79 1 2.374 2.8327 0 12838000 3610300 9227400 1393 252 714 794 2210 2210 EHALLAYTLGVK 12 1 0 Unmodified _EHALLAYTLGVK_ 0 0 0 0 A0A087WV01;Q9H2I7;Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q53GE9;Q53GA1;Q5VTE0;P68104;A9X7H1;Q96RE1;B4DV42;Q9NZS6;Q53G85;A8K9C4;Q8IUB0;Q53HR1;Q16577;Q05639;Q59GP5;Q53G89 A0A087WV01 A0A087WV01 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 657.8757 2 657.874445 1313.73434 74938.11 0.7279 0.00047887 0.3526 0.00023197 1.0805 0.00071084 657.874659407493 661.881732873949 146.36 0.56622 146.36 146.25 146.81 1.5259E-05 207 52 8 0 0 0 1.1566E-24 2 84481 140.49 140.49 1 2.3396 2.9646 0 32774000 9869500 22904000 1394 252 714 794 2211;2212 2212 EHAPLASPVENK 12 1 0 Phospho (STY) _EHAPLAS(ph)PVENK_ EHAPLAS(1)PVENK EHAPLAS(244.14)PVENK 0 0 1 0 B4DTN6;Q9ULJ3;Q5H9S0 B4DTN6 B4DTN6 ZBTB21;DKFZp781N1974 Zinc finger and BTB domain-containing protein 21 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 686.3193 2 686.318849 1370.62315 73637.64 0.60757 0.00041698 -0.061915 -4.2493E-05 0.54565 0.00037449 686.318979594196 690.325954582074 65.055 0.48261 65.055 64.804 65.286 0 179 34 8 0 0 0 3.0124E-194 3 31156 244.14 222.99 1 0.62795 0.77744 0 193170000 117530000 75640000 1395 661 715 795 2213;2214;2215 2214 1100 EHAPLASPVENK 12 1 0 Phospho (STY) _EHAPLAS(ph)PVENK_ EHAPLAS(1)PVENK EHAPLAS(71.08)PVENK 0 0 1 0 B4DTN6;Q9ULJ3;Q5H9S0 B4DTN6 B4DTN6 ZBTB21;DKFZp781N1974 Zinc finger and BTB domain-containing protein 21 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 460.5531 3 457.881658 1370.62315 90395.61 0.16059 7.3532E-05 -0.47806 -0.0002189 -0.31747 -0.00014536 457.881697106032 460.552896061974 65.026 0.35909 65.026 64.83 65.189 0 91 20 6 0 0 0 0.0011901 1 31193 71.08 65.9 1 0.70583 0.89545 0 41041000 21348000 19693000 1396 661 715 795 2216 2216 1100 EHAPLASPVENK 12 1 0 Phospho (STY) _EHAPLAS(ph)PVENK_ EHAPLAS(1)PVENK EHAPLAS(99.94)PVENK 0 0 1 0 B4DTN6;Q9ULJ3;Q5H9S0 B4DTN6 B4DTN6 ZBTB21;DKFZp781N1974 Zinc finger and BTB domain-containing protein 21 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 686.3196 2 686.318849 1370.62315 72109.91 0.9116 0.00062565 0.08257 5.6669E-05 0.99417 0.00068232 686.318931423195 690.326037402464 35.578 1.4716 35.578 35.057 36.529 0 641 118 10 0 0 0 9.6074E-07 2 19900 99.941 92.016 1 0.94576 0.63206 0 176490000 91656000 84834000 1397 661 715 795 2217;2218 2218 1100 EHFSFSPR 8 0 1 Phospho (STY) _EHFSFS(ph)PR_ EHFS(0.284)FS(0.716)PR EHFS(-4.02)FS(4.02)PR 0 0 1 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;H0YII3 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 543.7244 2 543.723856 1085.43316 84793.68 0.47913 0.00026052 0.18948 0.00010303 0.66862 0.00036354 543.723935290372 548.727828361583 85.356 0.93649 85.356 85.072 86.009 0 185 90 4 0 0 0 0.007187 1 46174 109.42 87.333 2 0.72191 0.88107 0 21445000 12121000 9323900 1398 829 716 796 2219 2219 1429 EHFSFSPR 8 0 1 Phospho (STY) _EHFSFS(ph)PR_ EHFS(0.17)FS(0.83)PR EHFS(-6.87)FS(6.87)PR 0 0 1 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;H0YII3 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 543.7239 2 543.723856 1085.43316 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.454 1 84.454 83.954 84.954 0 0 0 0 0.0001606 1 45465 91.087 69.001 2 1399 829 716 796 2220 2220 1429 EHFSFSPR 8 0 1 Phospho (STY) _EHFSFS(ph)PR_ EHFS(0.023)FS(0.977)PR EHFS(-16.24)FS(16.24)PR 0 0 1 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;H0YII3 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 548.7288 2 543.723856 1085.43316 82601.55 0.87058 0.00047335 -0.0084506 -4.5948E-06 0.86213 0.00046876 543.723664378013 548.728048834873 64.317 1.3581 64.317 63.692 65.05 0 380 120 5 0 0 0 1.2439E-07 3 40076 137.98 107.41 2 1.7747 1.3956 0 14272000 5128200 9144100 1400 829 716 796 2221;2222;2223 2222 1429 EHFSFSPR 8 0 1 Phospho (STY) _EHFSFS(ph)PR_ EHFS(0.281)FS(0.719)PR EHFS(-4.08)FS(4.08)PR 0 0 1 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;H0YII3 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 548.7286 2 543.723856 1085.43316 82601.54 0.95646 0.00052005 -0.087433 -4.7539E-05 0.86902 0.00047251 543.723679206262 548.727886850231 66.467 1.1796 66.467 65.773 66.953 0 387 108 5 0 0 0 0.002284 2 41621 117.7 95.612 2 1.7046 1.272 0 21816000 8081400 13735000 1401 829 716 796 2224;2225 2225 1429 EHLLLAR 7 0 1 Unmodified _EHLLLAR_ 0 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 426.2583 2 426.25852 850.502486 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.66 1 105.66 105.16 106.16 0 0 0 0 0.024837 1 61341 75.311 40.205 1 1402 998 717 797 2226 2226 EHPDPGSKDPEEDYPK 16 2 0 Unmodified _EHPDPGSKDPEEDYPK_ 0 0 0 1 F5H8F7;B4DPT1;A8K6T5;Q9UBL3 F5H8F7 F5H8F7 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 613.9396 3 613.939239 1838.79589 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.357 1 77.357 76.857 77.857 0 0 0 0 0.014867 1 40313 32.341 20.425 1 1403 483 718 798 2227 2227 EHQDGTAFSCTPDGR 15 0 1 Phospho (STY) _EHQDGTAFS(ph)CTPDGR_ EHQDGTAFS(0.782)CT(0.218)PDGR EHQDGT(-44.86)AFS(5.56)CT(-5.56)PDGR 0 0 1 0 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 884.337 2 879.33289 1756.65123 64922.27 0.79096 0.00069552 0.15839 0.00013928 0.94935 0.00083479 879.333083998152 884.337234151799 60.546 0.4205 60.546 60.353 60.773 3.8147E-06 149 29 7 0 0 0 6.9108E-34 2 27569 143.28 134.7 3 0.75685 0.9427 0 37467000 21408000 16059000 1404 953 719 799 2228;2229 2229 1653;2861 EHQDGTAFSCTPDGR 15 0 1 Phospho (STY) _EHQDGTAFSCT(ph)PDGR_ EHQDGT(0.001)AFS(0.033)CT(0.966)PDGR EHQDGT(-29.59)AFS(-14.68)CT(14.68)PDGR 0 0 1 0 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 586.5582 3 586.557686 1756.65123 79794.55 0.83953 0.00049243 0.021522 1.2624E-05 0.86105 0.00050506 586.557702718595 589.893895432848 60.519 0.4354 60.519 60.338 60.773 0 170 30 8 0 0 0 0.00034261 2 27501 56.304 50.524 3 0.70565 0.88063 0 38538000 22834000 15704000 1405 953 719 799 2230;2231 2230 1653;2861 EHQDGTAFSCTPDGR 15 0 1 Phospho (STY) _EHQDGTAFS(ph)CTPDGR_ EHQDGT(0.001)AFS(0.499)CT(0.499)PDGR EHQDGT(-25.59)AFS(0)CT(0)PDGR 0 0 1 0 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-SECPEP 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 879.8665 2 879.33289 1756.65123 63456.49 0.84591 0.00074384 0.052265 4.5958E-05 0.89817 0.00078979 879.33355191997 884.337252439314 28.751 0.89864 28.751 28.299 29.197 0 348 61 9 0 0 0 0.012654 1 14411 63.966 54.533 3 1.7965 1.1976 0 151100000 55153000 95946000 1406 953 719 799 2232 2232 1653;2861 EHQEMDEGSQSLEK 14 1 0 Phospho (STY) _EHQEMDEGSQS(ph)LEK_ EHQEMDEGS(0.07)QS(0.93)LEK EHQEMDEGS(-11.22)QS(11.22)LEK 0 0 1 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 867.8434 2 863.834931 1725.65531 65043.43 0.60587 0.00052337 -0.024067 -2.079E-05 0.5818 0.00050258 864.336173246093 867.842345891673 24.437 0.38766 24.437 24.259 24.647 0 88 20 6 0 0 0 7.09E-34 2 10754 146.1 128.73 2 2.5206 1.8547 0 19739000 5472100 14267000 1407 1170 720 800 2233;2234 2234 2285 EHSLQVSPSLEK 12 1 0 Phospho (STY) _EHSLQVS(ph)PSLEK_ EHSLQVS(1)PSLEK EHS(-84.66)LQVS(37.83)PS(-37.83)LEK 0 0 1 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 721.3444 2 717.337239 1432.65992 71137.15 0.76424 0.00054821 0.096505 6.9226E-05 0.86074 0.00061744 717.337241215009 721.344273534812 77.443 1.802 77.443 76.762 78.564 0 1121 159 9 0 0 0 4.1386E-149 4 40604 229.97 212.39 3 0.68929 0.85143 0 550430000 326300000 224130000 1408 943 721 801 2235;2236;2237;2238 2238 1616;1617 EHSLQVSPSLEK 12 1 0 Phospho (STY) _EHSLQVS(ph)PSLEK_ EHS(0.003)LQVS(0.874)PS(0.123)LEK EHS(-25.01)LQVS(8.51)PS(-8.51)LEK 0 0 1 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 478.5605 3 478.560585 1432.65992 86968.83 0.425 0.00020339 0.84929 0.00040644 1.2743 0.00060982 478.560414445394 481.232385086252 77.498 1.2222 77.498 76.891 78.114 0 385 108 5 0 0 0 0.0039329 1 40183 52.42 41.422 3 0.76358 0.949 0 90471000 52752000 37718000 1409 943 721 801 2239 2239 1616;1617 EHSLQVSPSLEK 12 1 0 Phospho (STY) _EHS(ph)LQVSPSLEK_ EHS(0.849)LQVS(0.127)PS(0.025)LEK EHS(8.26)LQVS(-8.26)PS(-15.38)LEK 0 0 1 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 721.3448 2 717.337239 1432.65992 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.261 1 79.261 78.761 79.761 0 0 0 0 0.010415 1 41745 42.789 12.982 3 1410 943 721 801 2240 2240 1616;1617 EHSLQVSPSLEK 12 1 0 Phospho (STY) _EHSLQVS(ph)PSLEK_ EHSLQVS(0.993)PS(0.007)LEK EHS(-64.72)LQVS(21.76)PS(-21.76)LEK 0 0 1 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 717.3376 2 717.337239 1432.65992 71399.77 0.9067 0.00065041 0.46797 0.00033569 1.3747 0.0009861 717.337950808109 721.344654801654 62.245 5.8204 62.245 60.105 65.925 -3.8147E-06 3652 534 11 0 0 0 1.0529E-219 12 38048 252.46 206.57 3 1.3292 0.88537 0 1343400000 577080000 766360000 1411 943 721 801 2241;2242;2243;2244;2245;2246;2247;2248;2249;2250;2251;2252 2242 1616;1617 EHSLQVSPSLEK 12 1 0 Phospho (STY) _EHSLQVS(ph)PSLEK_ EHS(0.001)LQVS(0.986)PS(0.012)LEK EHS(-28.53)LQVS(19.03)PS(-19.03)LEK 0 0 1 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 481.2322 3 478.560585 1432.65992 86036.45 0.55684 0.00026648 -0.20447 -9.7852E-05 0.35237 0.00016863 478.560568776442 481.231810277724 62.559 2.8713 62.559 60.912 63.783 -3.8147E-06 577 268 7 0 0 0 0.001579 1 38290 69.331 59.279 3 1.3496 0.90243 0 127490000 47749000 79739000 1412 943 721 801 2253 2253 1616;1617 EHSLQVSPSLEK 12 1 0 Phospho (STY) _EHSLQVS(ph)PSLEK_ EHS(0.002)LQVS(0.985)PS(0.013)LEK EHS(-26.12)LQVS(18.82)PS(-18.82)LEK 0 0 1 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 478.5609 3 478.560585 1432.65992 NaN NaN NaN 0.1353 6.4748E-05 NaN NaN NaN NaN 62.154 1.5066 62.154 61.124 62.631 -3.8147E-06 0 0 0 0.0016049 1 38342 70.41 55.534 3 NaN NaN 0 36796000 36796000 0 1413 943 721 801 2254 2254 1616;1617 EHSLQVSPSLEK 12 1 0 2 Phospho (STY) _EHS(ph)LQVS(ph)PSLEK_ EHS(1)LQVS(0.785)PS(0.215)LEK EHS(49.38)LQVS(5.64)PS(-5.64)LEK 0 0 2 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 761.3275 2 757.320404 1512.62626 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.244 1 73.244 72.744 73.744 0 0 0 0 2.693E-05 1 37268 76.01 58.278 3 1414 943 721 802 2255 2255 1616;1617 EHVEEISELFYDAK 14 1 0 Unmodified _EHVEEISELFYDAK_ 0 0 0 0 B5BUB1;Q9Y265;H7C4G5 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 854.9074 2 854.906867 1707.79918 66120 0.56599 0.00048387 -0.11176 -9.5542E-05 0.45423 0.00038833 854.906801449181 858.913663799708 145.59 0.16623 145.59 145.5 145.67 0 21 4 8 0 0 0 9.7199E-23 2 83958 124.42 108.53 1 0.78776 0.93309 0 5072700 2782800 2289900 1415 692 722 803 2256;2257 2256 EHVIEALR 8 0 1 Unmodified _EHVIEALR_ 0 0 0 0 F8W7C6;A0A087WV22;X1WI28;X5D2T3;P27635;H7C123;X5D7P1;H7C2C5 F8W7C6 F8W7C6 RPL10 60S ribosomal protein L10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 488.7764 2 483.771991 965.529429 89743.3 0.8435 0.00040806 0.25606 0.00012388 1.0996 0.00053194 483.771998441013 488.776192801326 96.502 0.3716 96.502 96.294 96.665 0 74 29 4 0 0 0 0.01943 1 54429 74.127 56.092 1 0.81032 0.95762 0 14302000 5618300 8683700 1416 253 723 804 2258 2258 EHVIEALR 8 0 1 Unmodified _EHVIEALR_ 0 0 0 0 F8W7C6;A0A087WV22;X1WI28;X5D2T3;P27635;H7C123;X5D7P1;H7C2C5 F8W7C6 F8W7C6 RPL10 60S ribosomal protein L10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 488.7756 2 483.771991 965.529429 87524.2 0.66586 0.00032212 -0.1501 -7.2615E-05 0.51576 0.00024951 483.771851643342 488.775971496013 97.491 0.407 97.491 97.279 97.686 0 99 34 4 0 0 0 0.020101 2 55068 85.064 66.282 1 0.83694 1.0149 0 19967000 9875300 10091000 1417 253 723 804 2259;2260 2259 EHVIEALR 8 0 1 Unmodified _EHVIEALR_ 0 0 0 0 F8W7C6;A0A087WV22;X1WI28;X5D2T3;P27635;H7C123;X5D7P1;H7C2C5 F8W7C6 F8W7C6 RPL10 60S ribosomal protein L10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 483.7717 2 483.771991 965.529429 86429.8 0.23835 0.00011531 -0.078141 -3.7802E-05 0.16021 7.7503E-05 483.771741011113 488.775905026365 99.029 1.0663 99.029 98.134 99.2 0 325 89 6 0 0 0 0.0053873 1 56280 100.45 82.416 1 0.92073 1.1626 0 101120000 50122000 51000000 1418 253 723 804 2261 2261 EHVIEALR 8 0 1 Unmodified _EHVIEALR_ 0 0 0 0 F8W7C6;A0A087WV22;X1WI28;X5D2T3;P27635;H7C123;X5D7P1;H7C2C5 F8W7C6 F8W7C6 RPL10 60S ribosomal protein L10 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 483.7719 2 483.771991 965.529429 NaN NaN NaN -0.12853 -6.2177E-05 NaN NaN NaN NaN 99.185 0.97996 99.185 99.052 100.03 0 0 0 0 6.7323E-06 1 56856 87.323 60.72 1 NaN NaN 0 48004000 48004000 0 1419 253 723 804 2262 2262 EHVIEALR 8 0 1 Unmodified _EHVIEALR_ 0 0 0 0 F8W7C6;A0A087WV22;X1WI28;X5D2T3;P27635;H7C123;X5D7P1;H7C2C5 F8W7C6 F8W7C6 RPL10 60S ribosomal protein L10 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 483.7722 2 483.771991 965.529429 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.117 1 98.117 97.617 98.617 7.6294E-06 0 0 0 0.017955 1 55672 73.26 47.523 1 1420 253 723 804 2263 2263 EHVIEALRR 9 0 2 Unmodified _EHVIEALRR_ 0 0 0 1 F8W7C6;A0A087WV22;X1WI28;X5D2T3;P27635;H7C123;X5D7P1;H7C2C5 F8W7C6 F8W7C6 RPL10 60S ribosomal protein L10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 561.8227 2 561.822547 1121.63054 82677.23 0.76152 0.00042784 -0.22305 -0.00012531 0.53848 0.00030253 561.822299973387 571.830699276095 118.53 1.1549 118.53 117.69 118.84 7.6294E-06 226 101 4 0 0 0 0.0062771 1 71014 71.379 17.412 1 0.98085 1.152 0 9881900 4580600 5301200 1421 253 724 805 2264 2264 EHVIEALRR 9 0 2 Unmodified _EHVIEALRR_ 0 0 0 1 F8W7C6;A0A087WV22;X1WI28;X5D2T3;P27635;H7C123;X5D7P1;H7C2C5 F8W7C6 F8W7C6 RPL10 60S ribosomal protein L10 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 374.8838 3 374.884123 1121.63054 NaN NaN NaN -0.51769 -0.00019407 NaN NaN NaN NaN 117.8 0.56178 117.8 117.35 117.92 -7.6294E-06 0 0 0 0.003592 1 70284 54.416 18.083 1 NaN NaN 0 6467300 6467300 0 1422 253 724 805 2265 2265 EHVIEALRR 9 0 2 Unmodified _EHVIEALRR_ 0 0 0 1 F8W7C6;A0A087WV22;X1WI28;X5D2T3;P27635;H7C123;X5D7P1;H7C2C5 F8W7C6 F8W7C6 RPL10 60S ribosomal protein L10 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 381.5562 3 374.884123 1121.63054 NaN NaN NaN -0.38915 -0.00014589 NaN NaN NaN NaN 119.16 4.1442 119.16 117.14 121.28 7.6294E-06 0 0 0 2.501E-05 4 70984 84.213 18.907 1 NaN NaN 0 20576000 0 20576000 1423 253 724 805 2266;2267;2268;2269 2266 EHVIEALRR 9 0 2 Unmodified _EHVIEALRR_ 0 0 0 1 F8W7C6;A0A087WV22;X1WI28;X5D2T3;P27635;H7C123;X5D7P1;H7C2C5 F8W7C6 F8W7C6 RPL10 60S ribosomal protein L10 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 374.8834 3 374.884123 1121.63054 NaN NaN NaN 0.07617 2.8555E-05 NaN NaN NaN NaN 121.46 0.27162 121.46 121.38 121.66 7.6294E-06 0 0 0 0.0061018 1 73375 44.203 16.874 1 NaN NaN 0 5093400 5093400 0 1424 253 724 805 2270 2270 EHVIEALRR 9 0 2 Unmodified _EHVIEALRR_ 0 0 0 1 F8W7C6;A0A087WV22;X1WI28;X5D2T3;P27635;H7C123;X5D7P1;H7C2C5 F8W7C6 F8W7C6 RPL10 60S ribosomal protein L10 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 381.5565 3 374.884123 1121.63054 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.88 1 116.88 116.38 117.38 7.6294E-06 0 0 0 0.01638 1 69933 45.161 17.148 1 1425 253 724 805 2271 2271 EHVIEALRR 9 0 2 Unmodified _EHVIEALRR_ 0 0 0 1 F8W7C6;A0A087WV22;X1WI28;X5D2T3;P27635;H7C123;X5D7P1;H7C2C5 F8W7C6 F8W7C6 RPL10 60S ribosomal protein L10 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 374.8838 3 374.884123 1121.63054 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.13 1 118.13 117.63 118.63 0 0 0 0 0.0037843 1 70850 56.258 16.954 1 1426 253 724 805 2272 2272 EHVIEALRR 9 0 2 Unmodified _EHVIEALRR_ 0 0 0 1 F8W7C6;A0A087WV22;X1WI28;X5D2T3;P27635;H7C123;X5D7P1;H7C2C5 F8W7C6 F8W7C6 RPL10 60S ribosomal protein L10 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 561.823 2 561.822547 1121.63054 NaN NaN NaN NaN NaN NaN NaN NaN NaN 119.15 1 119.15 118.65 119.65 0 0 0 0 0.00036952 1 71591 93.374 20.114 1 1427 253 724 805 2273 2273 EHVIEALRR 9 0 2 Unmodified _EHVIEALRR_ 0 0 0 1 F8W7C6;A0A087WV22;X1WI28;X5D2T3;P27635;H7C123;X5D7P1;H7C2C5 F8W7C6 F8W7C6 RPL10 60S ribosomal protein L10 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 381.5559 3 374.884123 1121.63054 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.56 1 121.56 121.06 122.06 0 0 0 0 0.011478 1 73402 49.418 14.15 1 1428 253 724 805 2274 2274 EIAIVHSDAEK 11 1 0 Phospho (STY) _EIAIVHS(ph)DAEK_ EIAIVHS(1)DAEK EIAIVHS(101.53)DAEK 0 0 1 0 A8K964;Q9H307;B4DTD4;B4E392 A8K964 A8K964 PNN Pinin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 650.3068 2 646.300125 1290.5857 75010.29 0.78859 0.00050966 0.028445 1.8384E-05 0.81703 0.00052805 646.300088214809 650.307261215227 65.63 0.79556 65.63 65.232 66.028 0 388 60 9 0 0 0 2.2952E-08 1 31393 101.53 10.879 1 1.1487 1.4205 0 333060000 157420000 175640000 1429 502 725 806 2275 2275 862 EIAIVHSDAEK 11 1 0 Phospho (STY) _EIAIVHS(ph)DAEK_ EIAIVHS(1)DAEK EIAIVHS(124.47)DAEK 0 0 1 0 A8K964;Q9H307;B4DTD4;B4E392 A8K964 A8K964 PNN Pinin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 650.309 2 646.300125 1290.5857 75997.88 1.1746 0.00075914 0.35464 0.0002292 1.5292 0.00098834 646.299891252031 650.307280133479 40.738 1.5605 40.738 40.292 41.852 0 690 137 8 0 0 0 1.2524E-10 3 24021 124.47 48.65 1 0.89104 0.58939 0 66839000 35015000 31824000 1430 502 725 806 2276;2277;2278 2278 862 EIAQDFK 7 1 0 Unmodified _EIAQDFK_ 0 0 0 0 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;A8K4Y7;Q6TXQ4 B4E380 B4E380 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 850.4307 1 850.430509 849.423233 67003.08 1.1593 0.00098594 0.032831 2.7921E-05 1.1922 0.0010139 850.430356686809 858.444592417231 33.544 0.65857 33.544 33.322 33.981 0 209 48 6 0 0 0 0.025579 1 18593 27.882 10.517 1 0.97892 0.64419 0 57594000 29211000 28382000 1431 527 726 807 2279 2279 EIAQEFKTDLR 11 1 1 Unmodified _EIAQEFKTDLR_ 0 0 0 1 Q5TEC6 Q5TEC6 Q5TEC6 HIST2H3PS2 Histone H3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 675.3574 2 675.356616 1348.69868 73431.52 0.81491 0.00055035 -0.076183 -5.1451E-05 0.73873 0.0004989 675.356585871047 684.367544391658 94.643 1.3636 94.643 93.837 95.2 0 529 108 9 0 0 0 4.6087E-20 3 53168 176.6 130.14 1 0.64682 0.78445 0 329630000 198830000 130800000 1432 1108 727 808 2280;2281;2282 2281 EIAQEFKTDLR 11 1 1 Unmodified _EIAQEFKTDLR_ 0 0 0 1 Q5TEC6 Q5TEC6 Q5TEC6 HIST2H3PS2 Histone H3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 456.5813 3 450.573503 1348.69868 88878.23 0.37517 0.00016904 -0.11911 -5.367E-05 0.25605 0.00011537 450.573551328914 456.580813171674 94.755 1.3394 94.755 93.719 95.058 0 571 107 9 0 0 0 0.0036088 3 52718 76.332 49.92 1 0.76986 0.94771 0 1039100000 545390000 493710000 1433 1108 727 808 2283;2284;2285 2284 EIAQEFKTDLR 11 1 1 Unmodified _EIAQEFKTDLR_ 0 0 0 1 Q5TEC6 Q5TEC6 Q5TEC6 HIST2H3PS2 Histone H3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 450.5733 3 450.573503 1348.69868 88546.9 0.30347 0.00013674 -0.52865 -0.00023819 -0.22518 -0.00010146 450.573334224189 456.914922455698 94.923 0.90966 94.923 94.254 95.164 0 276 71 10 0 0 0 0.022596 1 53203 52.247 30.851 1 0.59393 0.72711 0 679540000 514100000 165440000 1434 1108 727 808 2286 2286 EIAQEFKTDLR 11 1 1 Unmodified _EIAQEFKTDLR_ 0 0 0 1 Q5TEC6 Q5TEC6 Q5TEC6 HIST2H3PS2 Histone H3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 684.3687 2 675.356616 1348.69868 73351.31 0.912 0.00061593 0.25805 0.00017428 1.1701 0.0007902 675.356718600909 684.367995786069 95.469 1.3297 95.469 94.976 96.306 -7.6294E-06 563 119 8 0 0 0 3.3415E-08 2 53779 122.26 74.434 1 0.70113 0.84854 0 280750000 154390000 126360000 1435 1108 727 808 2287;2288 2288 EIAQEFKTDLR 11 1 1 Unmodified _EIAQEFKTDLR_ 0 0 0 1 Q5TEC6 Q5TEC6 Q5TEC6 HIST2H3PS2 Histone H3 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 450.5736 3 450.573503 1348.69868 88889.41 0.70844 0.0003192 0.26424 0.00011906 0.97268 0.00043826 450.907795029135 456.581253801105 96.512 0.39278 96.512 96.346 96.738 0 57 31 4 0 0 0 0.029881 1 54353 33.057 22.869 1 0.91279 1.0228 0 18026000 8266000 9760400 1436 1108 727 808 2289 2289 EIAQEFKTDLR 11 1 1 Unmodified _EIAQEFKTDLR_ 0 0 0 1 Q5TEC6 Q5TEC6 Q5TEC6 HIST2H3PS2 Histone H3 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 456.5811 3 450.573503 1348.69868 88535.89 0.43431 0.00019569 0.1502 6.7675E-05 0.58451 0.00026336 450.573617120068 456.581021110621 95.574 1.5006 95.574 95.043 96.544 7.6294E-06 866 131 10 0 0 0 0.030598 1 53852 39.917 22.975 1 0.70838 0.87115 0 962370000 573730000 388640000 1437 1108 727 808 2290 2290 EIAQEFKTDLR 11 1 1 Unmodified _EIAQEFKTDLR_ 0 0 0 1 Q5TEC6 Q5TEC6 Q5TEC6 HIST2H3PS2 Histone H3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 456.5812 3 450.573503 1348.69868 89232.18 0.33973 0.00015307 0.0062689 2.8246E-06 0.34599 0.0001559 450.573448673319 456.580958262347 71.428 2.1526 71.428 70.575 72.727 0 799 197 5 0 0 0 0.029621 2 45255 46.592 33.85 1 0.74724 0.571 0 22192000 12466000 9726700 1438 1108 727 808 2291;2292 2292 EIAQEFKTDLR 11 1 1 Unmodified _EIAQEFKTDLR_ 0 0 0 1 Q5TEC6 Q5TEC6 Q5TEC6 HIST2H3PS2 Histone H3 MULTI-SECPEP 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 684.3392 2 675.356616 1348.69868 74631.55 0.96817 0.00065386 1.0672 0.00072072 2.0353 0.0013746 675.858201630352 684.870673704021 71.877 1.059 71.877 71.587 72.646 0 298 98 5 0 0 0 0.033498 1 45558 33.378 33.378 1 1.4264 1.2326 0 7009500 2714100 4295400 1439 1108 727 808 2293 2293 EIDREKAALK 10 2 1 Unmodified _EIDREKAALK_ 0 0 0 2 A0A1B0GW15 A0A1B0GW15 A0A1B0GW15 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 586.8339 2 586.83532 1171.65609 NaN NaN NaN -1.3993 -0.00082114 NaN NaN NaN NaN 116.12 0.42157 116.12 115.79 116.21 0 0 0 0 0.006796 2 69210 66.621 28.829 1 NaN NaN 0 4448700 4448700 0 1440 387 728 809 2294;2295 2294 EIDREKAALK 10 2 1 Unmodified _EIDREKAALK_ 0 0 0 2 A0A1B0GW15 A0A1B0GW15 A0A1B0GW15 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 586.8344 2 586.83532 1171.65609 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.67 1 116.67 116.17 117.17 7.6294E-06 0 0 0 0.0071538 1 69775 57.59 24.327 1 1441 387 728 809 2296 2296 EIDREKAALK 10 2 1 Unmodified _EIDREKAALK_ 0 0 0 2 A0A1B0GW15 A0A1B0GW15 A0A1B0GW15 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 586.8356 2 586.83532 1171.65609 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.42 1 117.42 116.92 117.92 7.6294E-06 0 0 0 0.0084348 1 70322 54.416 15.395 1 1442 387 728 809 2297 2297 EIERPFETYK 10 1 1 Unmodified _EIERPFETYK_ 0 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 437.8905 3 437.890832 1310.65067 90272.56 0.35118 0.00015378 -0.040334 -1.7662E-05 0.31085 0.00013612 437.890733707402 443.898307475817 92.599 1.4896 92.599 91.701 93.191 0 378 130 6 0 0 0 0.0099025 1 51310 56.043 56.043 1 1.843 2.2005 0 99125000 31933000 67192000 1443 994 729 810 2298 2298 EIERPFETYK 10 1 1 Unmodified _EIERPFETYK_ 0 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 656.3357 2 656.33261 1310.65067 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.327 1 92.327 91.827 92.827 0 0 0 0 0.011927 1 51198 64.841 24.796 1 1444 994 729 810 2299 2299 EIESEIDSEEELINK 15 1 0 Phospho (STY) _EIESEIDS(ph)EEELINK_ EIES(0.44)EIDS(0.56)EEELINK EIES(-1.05)EIDS(1.05)EEELINK 0 0 1 0 Q4ZG57;Q14566 Q4ZG57 Q4ZG57 MCM6 DNA replication licensing factor MCM6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 928.9092 2 928.906076 1855.7976 61271.97 0.86894 0.00080717 -0.42247 -0.00039244 0.44647 0.00041473 929.405800779637 932.913594989228 97.95 0.1181 97.95 97.857 97.975 0 18 8 5 0 0 0 0.0031089 1 55558 40.477 26.058 2 1.178 1.3974 0 9597300 6686700 2910600 1445 1056 730 811 2300 2300 1968;1969 EIESEIDSEEELINK 15 1 0 Phospho (STY) _EIESEIDS(ph)EEELINK_ EIES(0.002)EIDS(0.998)EEELINK EIES(-26.36)EIDS(26.36)EEELINK 0 0 1 0 Q4ZG57;Q14566 Q4ZG57 Q4ZG57 MCM6 DNA replication licensing factor MCM6 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 932.9149 2 928.906076 1855.7976 NaN NaN NaN 1.1851 0.0011009 NaN NaN NaN NaN 98.092 0.16593 98.092 97.992 98.158 0 0 0 0 0.0001318 1 55654 57.434 41.805 2 NaN NaN 0 4423000 0 4423000 1446 1056 730 811 2301 2301 1968;1969 EIESEIDSEEELINK 15 1 0 Phospho (STY) _EIES(ph)EIDSEEELINK_ EIES(0.933)EIDS(0.067)EEELINK EIES(11.45)EIDS(-11.45)EEELINK 0 0 1 0 Q4ZG57;Q14566 Q4ZG57 Q4ZG57 MCM6 DNA replication licensing factor MCM6 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 928.9075 2 928.906076 1855.7976 NaN NaN NaN 0.94566 0.00087843 NaN NaN NaN NaN 105.08 0.66864 105.08 104.8 105.47 0 0 0 0 0.0037183 1 67549 44.045 30.645 2 NaN NaN 0 8271700 8271700 0 1447 1056 730 811 2302 2302 1968;1969 EIETYHNLLEGGQEDFESSGAGK 23 1 0 Unmodified _EIETYHNLLEGGQEDFESSGAGK_ 0 0 0 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 837.7166 3 837.382107 2509.12449 NaN NaN NaN -0.23839 -0.00019963 NaN NaN NaN NaN 108.88 1.6482 108.88 108.4 110.05 7.6294E-06 0 0 0 6.9281E-34 3 64202 108.25 91.501 1 NaN NaN 0 160220000 160220000 0 + 1448 757 731 812 2303;2304;2305 2304 EIETYHNLLEGGQEDFESSGAGK 23 1 0 Unmodified _EIETYHNLLEGGQEDFESSGAGK_ 0 0 0 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 837.3831 3 837.382107 2509.12449 NaN NaN NaN -0.17978 -0.00015054 NaN NaN NaN NaN 100.09 1.5163 100.09 99.314 100.83 0 0 0 0 0.0013141 2 64002 42.454 26.689 1 NaN NaN 0 68235000 68235000 0 + 1449 757 731 812 2306;2307 2306 EIISHISQHGGK 12 1 0 Unmodified _EIISHISQHGGK_ 0 0 0 0 A6NHR9;J3KTL8;J3QSH1 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 435.9022 3 435.901843 1304.6837 92987.45 0.51666 0.00022521 0.056175 2.4487E-05 0.57283 0.0002497 435.901796849516 438.573221519349 93.087 0.94954 93.087 92.679 93.628 0 219 77 4 0 0 0 0.0044703 1 51688 46.88 32.318 1 0.87189 1.1067 0 39939000 20190000 19748000 1450 429 732 813 2308 2308 EIKLSDDFDSPVK 13 2 0 2 Phospho (STY) _EIKLS(ph)DDFDS(ph)PVK_ EIKLS(1)DDFDS(1)PVK EIKLS(173.51)DDFDS(173.51)PVK 0 0 2 1 Q96T23;H0YER1;H0YCN2 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 826.847 2 826.846452 1651.67835 66776.45 0.76727 0.00063442 -0.37409 -0.00030932 0.39318 0.0003251 826.846163822484 834.860344835699 98.58 1.5188 98.58 97.822 99.341 -7.6294E-06 825 127 9 0 0 0 5.4275E-54 4 56092 173.51 146.98 1 0.63054 0.83551 0 336250000 209770000 126480000 1451 1188 733 814 2309;2310;2311;2312 2310 2341;2342 EIKLSDDFDSPVK 13 2 0 2 Phospho (STY) _EIKLS(ph)DDFDS(ph)PVK_ EIKLS(1)DDFDS(1)PVK EIKLS(74.3)DDFDS(74.3)PVK 0 0 2 1 Q96T23;H0YER1;H0YCN2 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 826.8472 2 826.846452 1651.67835 66502.88 1.0339 0.00085491 0.18208 0.00015055 1.216 0.0010055 826.846601459693 834.860832193482 103.64 1.9707 103.64 102.65 104.62 0 1086 191 8 0 0 0 0.00038622 2 66670 74.296 64.343 1 2.2195 1.6582 0 110040000 35675000 74365000 1452 1188 733 814 2313;2314 2314 2341;2342 EILSPLFPR 9 0 1 Phospho (STY) _EILS(ph)PLFPR_ EILS(1)PLFPR EILS(95.52)PLFPR 0 0 1 0 Q5VWN6 Q5VWN6 Q5VWN6 FAM208B Protein FAM208B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 576.2971 2 576.296657 1150.57876 80172.51 0.78161 0.00045044 0.11385 6.561E-05 0.89546 0.00051605 576.296645244165 581.300670600131 128.92 1.0216 128.92 128.54 129.57 0 465 85 8 0 0 0 6.1051E-05 3 78192 95.523 56.731 1 0.86548 1.0921 0 71159000 36989000 34170000 1453 1113 734 815 2315;2316;2317 2316 2106 EILSPLFPR 9 0 1 Phospho (STY) _EILS(ph)PLFPR_ EILS(1)PLFPR EILS(57.53)PLFPR 0 0 1 0 Q5VWN6 Q5VWN6 Q5VWN6 FAM208B Protein FAM208B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 576.2968 2 576.296657 1150.57876 79391.26 0.63406 0.00036541 0.069675 4.0154E-05 0.70373 0.00040556 576.296571888959 581.300674026219 134.84 0.19504 134.84 134.71 134.9 0 14 4 6 0 0 0 0.0097098 2 87118 57.532 36.16 1 1.1463 0.90766 0 10381000 3586600 6793900 1454 1113 734 815 2318;2319 2319 2106 EIPSATQSPISK 12 1 0 Phospho (STY) _EIPSATQS(ph)PISK_ EIPSATQS(0.975)PIS(0.025)K EIPS(-99.45)AT(-68.28)QS(16)PIS(-16)K 0 0 1 0 Q9BQG0;I3L1L3;B4DE42 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 673.3283 2 669.321057 1336.62756 73994.14 0.70096 0.00046917 -0.0088114 -5.8977E-06 0.69215 0.00046327 669.321150515516 673.328059745139 58.997 2.0746 58.997 58.152 60.226 0 1071 161 10 0 0 0 2.6081E-33 4 26438 156 116.09 4 0.64229 0.79312 0 635820000 385680000 250140000 1455 1192 735 816 2320;2321;2322;2323 2323 2358;2359 EIPSATQSPISK 12 1 0 Phospho (STY) _EIPSATQS(ph)PISK_ EIPSATQS(0.898)PIS(0.101)K EIPS(-60.32)AT(-33.27)QS(9.48)PIS(-9.48)K 0 0 1 0 Q9BQG0;I3L1L3;B4DE42 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 669.322 2 669.321057 1336.62756 73996.74 1.0774 0.00072111 -0.3055 -0.00020448 0.77187 0.00051663 669.321112344625 673.327818419002 53.954 3.8124 53.954 53.068 56.88 0 1732 323 10 0 0 0 1.0656E-09 6 32973 107.2 68.049 4 0.79378 0.52954 0 520100000 286640000 233450000 1456 1192 735 816 2324;2325;2326;2327;2328;2329 2327 2358;2359 EIPSATQSPISK 12 1 0 2 Phospho (STY) _EIPS(ph)ATQS(ph)PISK_ EIPS(0.794)AT(0.415)QS(0.776)PIS(0.015)K EIPS(4.51)AT(-4.37)QS(4.37)PIS(-16.95)K 0 0 2 0 Q9BQG0;I3L1L3;B4DE42 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 709.3049 2 709.304223 1416.59389 73895.86 1.1112 0.0007882 -0.32978 -0.00023392 0.78145 0.00055429 709.304608645509 713.310703169117 66.387 1.1756 66.387 65.807 66.982 0 478 108 7 0 0 0 0.0074957 1 41476 48.823 19.016 6 0.91797 0.63036 0 24633000 13028000 11605000 1457 1192 735 817 2330 2330 2358;2359 EIPSATQSPISKK 13 2 0 Phospho (STY) _EIPSATQS(ph)PISKK_ EIPS(0.006)AT(0.251)QS(0.68)PIS(0.063)KK EIPS(-20.23)AT(-4.32)QS(4.32)PIS(-10.36)KK 0 0 1 1 Q9BQG0;I3L1L3;B4DE42 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 741.3835 2 733.368539 1464.72252 71583.03 0.91116 0.00066821 0.41659 0.00030551 1.3277 0.00097372 733.368951718909 741.38296000234 36.494 0.78749 36.494 36.176 36.963 0 383 66 8 0 0 0 0.0023046 1 20594 51.939 29.409 4 0.87302 0.66453 0 50158000 26042000 24116000 1458 1192 736 818 2331 2331 2358;2359 EIQTAVR 7 0 1 Unmodified _EIQTAVR_ 0 0 0 0 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;P57053;Q96A08;A0A024RCJ2;Q16778;P33778;P23527;P06899 B2R4S9;A0A024RCJ2 B2R4S9 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS;HIST1H2BA;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 408.7324 2 408.732335 815.450116 95003.33 -0.22159 -9.0569E-05 0.24677 0.00010086 0.025185 1.0294E-05 408.732390774944 413.736425525337 51.709 1.7508 51.709 50.916 52.667 0 397 139 4 0 0 0 0.0046641 1 21250 126.68 48.956 1 0.8407 1.0578 0 46942000 24804000 22139000 1459 21;211 737 819 2332 2332 EIQTLLSHK 9 1 0 Unmodified _EIQTLLSHK_ 0 0 0 0 E9PFK5;A8KA74;P78316;Q96GC8 E9PFK5 E9PFK5 NOP14 Nucleolar protein 14 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 538.8136 2 534.806031 1067.59751 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.67 1 92.67 92.17 93.17 0 0 0 0 0.003606 1 51457 72.23 38.433 1 1460 507 738 820 2333 2333 EISDDEAEEEKGEKEEEDK 19 3 0 Unmodified _EISDDEAEEEKGEKEEEDK_ 0 0 0 2 A0A024RD80;P08238;B4DMA2;B4DGL0;Q6PK50;Q58FF7 A0A024RD80 A0A024RD80 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 754.9991 3 746.65204 2236.93429 NaN NaN NaN -1.638 -0.001223 NaN NaN NaN NaN 64.893 0.1143 64.893 64.87 64.984 0 0 0 0 0.0073873 1 31061 32.688 7.6346 1 NaN NaN 0 9155400 0 9155400 1461 223 739 821 2334 2334 EISDDEAEEEKGEKEEEDKDDEEK 24 4 0 Phospho (STY) _EIS(ph)DDEAEEEKGEKEEEDKDDEEK_ EIS(1)DDEAEEEKGEKEEEDKDDEEK EIS(56.49)DDEAEEEKGEKEEEDKDDEEK 0 0 1 3 A0A024RD80;P08238;B4DMA2;B4DGL0;Q6PK50;Q58FF7 A0A024RD80 A0A024RD80 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 742.3057 4 734.290941 2933.13466 69669.28 0.92098 0.00067627 -0.12505 -9.1821E-05 0.79593 0.00058445 734.541499962775 742.555840734615 64.153 0.34337 64.153 63.999 64.342 0 171 22 12 0 0 0 2.4044E-10 2 30404 56.488 56.488 1 1.3285 1.7917 0 214900000 100860000 114040000 1462 223 740 822 2335;2336 2336 350 EISDDEAEEEKGEKEEEDKDDEEK 24 4 0 Phospho (STY) _EIS(ph)DDEAEEEKGEKEEEDKDDEEK_ EIS(1)DDEAEEEKGEKEEEDKDDEEK EIS(61.36)DDEAEEEKGEKEEEDKDDEEK 0 0 1 3 A0A024RD80;P08238;B4DMA2;B4DGL0;Q6PK50;Q58FF7 A0A024RD80 A0A024RD80 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 979.0532 3 978.718829 2933.13466 61394.31 0.52378 0.00051263 0.049387 4.8336E-05 0.57317 0.00056097 979.053144608259 989.739022592335 64.155 0.26975 64.155 64.012 64.281 0 122 17 10 0 0 0 6.7023E-11 1 30422 61.361 55.199 1 1.4932 2.0139 0 112470000 48881000 63589000 1463 223 740 822 2337 2337 350 EISPGSGPGEIR 12 0 1 Phospho (STY) _EIS(ph)PGSGPGEIR_ EIS(0.996)PGS(0.004)GPGEIR EIS(23.48)PGS(-23.48)GPGEIR 0 0 1 0 Q9H1C6;E9PMG5;E9PMV8;B4DJ76;H0Y5B0;Q6R5J7;E9PK52;E9PHY5;O43491 Q9H1C6 Q9H1C6 EPB41L2 Band 4.1-like protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 644.7938 2 639.789924 1277.5653 76986.45 0.87625 0.00056061 -0.43153 -0.00027609 0.44472 0.00028453 639.789718117558 644.793730273948 64.346 0.89948 64.346 63.837 64.737 0 129 63 4 0 0 0 0.015183 1 30440 42.209 20.703 2 1.4497 1.7403 0 17779000 7944300 9834800 1464 627 741 823 2338 2338 1036 EITALAPSTMK 11 1 0 Oxidation (M) _EITALAPSTM(ox)K_ EITALAPSTM(1)K EITALAPSTM(79.99)K 0 1 0 0 B4E335;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;F1BXA6;A4UCT3;A5GZ75;B3KPP5;Q9UE89;B4E3A4;P63261;B4DVQ0;B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;Q13707;A8K3K1;Q7Z7J6;A6NL76;B4DUI8 B4E335;B4E3A4;B7Z6P1 B4E3A4 PS1TP5BP1;ACTB;ACTG1;ACTA2;ACTG2;ACTA1;ACTC1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 593.3174 2 589.310289 1176.60602 NaN NaN NaN -0.032926 -1.9403E-05 NaN NaN NaN NaN 71.562 0.27787 71.562 71.483 71.761 0 0 0 0 0.0014176 1 35913 79.986 44.541 1 NaN NaN 0 7028500 0 7028500 1465 683;685;711 742 824 2339 2339 173 EITALAPSTMK 11 1 0 Oxidation (M) _EITALAPSTM(ox)K_ EITALAPSTM(1)K EITALAPSTM(56.92)K 0 1 0 0 B4E335;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;Q96DE1;Q96FU6;F1BXA6;A4UCT3;A5GZ75;B3KPP5;Q9UE89;B4E3A4;P63261;B4DVQ0;B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;Q13707;A8K3K1;Q7Z7J6;A6NL76;B4DUI8 B4E335;B4E3A4;B7Z6P1 B4E3A4 PS1TP5BP1;ACTB;ACTG1;ACTA2;ACTG2;ACTA1;ACTC1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 593.3182 2 589.310289 1176.60602 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.724 1 70.724 70.224 71.224 0 0 0 0 0.0033941 1 35405 56.916 20.215 1 1466 683;685;711 742 824 2340 2340 173 EITSHEEGGGDVSPR 15 0 1 Phospho (STY) _EITSHEEGGGDVS(ph)PR_ EITSHEEGGGDVS(1)PR EIT(-39.54)S(-45.12)HEEGGGDVS(39.54)PR 0 0 1 0 A0A1B0GUH9;A0PJI9;A0A1P0AZG4 A0A1B0GUH9 A0A1B0GUH9 C10orf12 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 553.9011 3 550.564946 1648.67301 81648.94 0.64954 0.00035761 -0.14032 -7.7254E-05 0.50922 0.00028036 550.564887300902 553.900898645355 48.888 1.056 48.888 48.317 49.373 0 511 74 10 0 0 0 0.00043723 2 18993 63.578 54.636 3 1.3893 1.7512 0 60361000 25401000 34960000 1467 385 743 825 2341;2342 2341 651 EITSHEEGGGDVSPR 15 0 1 Phospho (STY) _EITSHEEGGGDVS(ph)PR_ EITSHEEGGGDVS(1)PR EIT(-70.31)S(-64.58)HEEGGGDVS(64.58)PR 0 0 1 0 A0A1B0GUH9;A0PJI9;A0A1P0AZG4 A0A1B0GUH9 A0A1B0GUH9 C10orf12 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 825.3448 2 825.343781 1648.67301 67429.7 0.87356 0.00072099 0.30877 0.00025485 1.1823 0.00097583 825.343741955661 830.347543705071 48.878 1.329 48.878 48.317 49.646 -3.8147E-06 499 97 10 0 0 0 3.6025E-12 2 19192 101.53 81.321 3 1.3919 1.7294 0 36131000 15401000 20730000 1468 385 743 825 2343;2344 2344 651 EITSHEEGGGDVSPR 15 0 1 Phospho (STY) _EITSHEEGGGDVS(ph)PR_ EIT(0.001)S(0.007)HEEGGGDVS(0.992)PR EIT(-28.92)S(-21.73)HEEGGGDVS(21.73)PR 0 0 1 0 A0A1B0GUH9;A0PJI9;A0A1P0AZG4 A0A1B0GUH9 A0A1B0GUH9 C10orf12 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 553.9012 3 550.564946 1648.67301 80919.37 0.28853 0.00015886 0.39505 0.0002175 0.68359 0.00037636 550.565328582813 553.901237165144 22.216 0.73851 22.216 21.961 22.7 -1.9073E-06 278 39 14 0 0 0 2.445E-05 1 8756 76.015 58.509 3 3.2888 2.1663 0 273740000 69835000 203900000 1469 385 743 825 2345 2345 651 EITSHEEGGGDVSPR 15 0 1 Phospho (STY) _EITSHEEGGGDVS(ph)PR_ EITSHEEGGGDVS(1)PR EIT(-131.99)S(-122.15)HEEGGGDVS(122.15)PR 0 0 1 0 A0A1B0GUH9;A0PJI9;A0A1P0AZG4 A0A1B0GUH9 A0A1B0GUH9 C10orf12 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 830.3483 2 825.343781 1648.67301 66598.38 0.45228 0.00037329 0.3427 0.00028284 0.79498 0.00065613 825.344393627849 830.348254494143 22.214 0.97961 22.214 21.961 22.941 0 275 52 14 0 0 0 9.5151E-63 2 8770 172.26 152.14 3 2.8979 1.897 0 373210000 95587000 277620000 1470 385 743 825 2346;2347 2346 651 EITSHEEGGGDVSPRK 16 1 1 Phospho (STY) _EITSHEEGGGDVS(ph)PRK_ EIT(0.023)S(0.025)HEEGGGDVS(0.952)PRK EIT(-16.16)S(-15.77)HEEGGGDVS(15.77)PRK 0 0 1 1 A0A1B0GUH9;A0PJI9;A0A1P0AZG4 A0A1B0GUH9 A0A1B0GUH9 C10orf12 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 599.2723 3 593.263267 1776.76797 78006.08 0.57081 0.00033864 0.3649 0.00021648 0.93571 0.00055512 593.264194546427 599.270897884027 57.626 1.0337 57.626 57.232 58.266 0 434 84 8 0 0 0 0.00032646 1 25112 40.952 22.796 3 1.4482 1.7135 0 49280000 21102000 28178000 1471 385 744 826 2348 2348 651 EITSHEEGGGDVSPRK 16 1 1 Phospho (STY) _EITSHEEGGGDVS(ph)PRK_ EITSHEEGGGDVS(1)PRK EIT(-55.5)S(-49.82)HEEGGGDVS(49.82)PRK 0 0 1 1 A0A1B0GUH9;A0PJI9;A0A1P0AZG4 A0A1B0GUH9 A0A1B0GUH9 C10orf12 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 889.3945 2 889.391262 1776.76797 64953.15 1.0684 0.00095018 -0.13647 -0.00012137 0.93189 0.00082881 889.391784891539 898.40226577943 17.232 0.31095 17.232 17.087 17.398 0 66 10 10 0 0 0 1.7484E-09 2 4460 84.859 73.915 3 3.4481 2.6584 0 48107000 11329000 36778000 1472 385 744 826 2349;2350 2349 651 EKDSPFKPK 9 3 0 Phospho (STY) _EKDS(ph)PFKPK_ EKDS(1)PFKPK EKDS(81.52)PFKPK 0 0 1 2 B4DLF8;A0A024R9B5;B4DMM7;Q15291 B4DLF8 B4DLF8 RBBP5 Retinoblastoma-binding protein 5 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 578.2759 2 578.275922 1154.53729 NaN NaN NaN 0.11487 6.6426E-05 NaN NaN NaN NaN 66.931 0.22333 66.931 66.823 67.047 0 0 0 0 0.00032635 1 32776 81.525 47.649 1 NaN NaN 0 28654000 28654000 0 1473 161 745 827 2351 2351 252 EKEDDEEEEDEDASGGDQDQEER 23 1 1 Unmodified _EKEDDEEEEDEDASGGDQDQEER_ 0 0 0 1 A0A024R9J0;O60216;E5RI01;E5RFZ5 A0A024R9J0 A0A024R9J0 RAD21 Double-strand-break repair protein rad21 homolog MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 901.009 3 895.000896 2681.98086 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.94 1 48.94 48.44 49.44 0 0 0 0 0.0099608 1 19363 31.36 24 1 1474 167 746 828 2352 2352 EKEDDEEEEDEDASGGDQDQEERR 24 1 2 Unmodified _EKEDDEEEEDEDASGGDQDQEERR_ 0 0 0 2 A0A024R9J0;O60216;E5RI01;E5RFZ5 A0A024R9J0 A0A024R9J0 RAD21 Double-strand-break repair protein rad21 homolog ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 717.7862 4 710.527769 2838.08197 NaN NaN NaN -0.047224 -3.3554E-05 NaN NaN NaN NaN 61.02 0.27859 61.02 60.861 61.139 -3.8147E-06 0 0 0 1.2543E-07 1 27952 54.235 47.203 1 NaN NaN 0 16007000 0 16007000 1475 167 747 829 2353 2353 EKEEEEEPEGKPSDAESSESSDDEK 25 3 0 Unmodified _EKEEEEEPEGKPSDAESSESSDDEK_ 0 0 0 2 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 940.7311 3 932.716097 2795.12646 63978.43 0.8037 0.00074962 -0.0023353 -2.1782E-06 0.80137 0.00074745 933.050550964679 941.064315332247 61.278 0.3652 61.278 61.153 61.518 0 86 29 5 0 0 0 0.0037835 1 28155 23.209 19.047 1 2.5142 3.1844 0 14569000 3944700 10625000 1476 1193 748 830 2354 2354 EKPDSDDDLDIASLVTAK 18 2 0 Phospho (STY) _EKPDS(ph)DDDLDIASLVTAK_ EKPDS(1)DDDLDIASLVTAK EKPDS(46.51)DDDLDIAS(-46.51)LVT(-59.08)AK 0 0 1 1 A0A024RAC0;Q86V48 A0A024RAC0 A0A024RAC0 LUZP1 Leucine zipper protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1006.9625 2 1006.45901 2010.90346 60790.04 0.27896 0.00028076 0.47351 0.00047656 0.75246 0.00075732 1006.96072189328 1014.47356703541 119.94 1.2966 119.94 119.31 120.61 0 699 116 8 0 0 0 1.4787E-06 2 71973 68.83 62.132 3 2.4107 3.068 0 80056000 22797000 57259000 1477 180 749 831 2355;2356 2355 281 EKPETSTENHGDDLEK 16 2 0 Phospho (STY) _EKPETS(ph)TENHGDDLEK_ EKPET(0.191)S(0.658)T(0.151)ENHGDDLEK EKPET(-5.38)S(5.38)T(-6.38)ENHGDDLEK 0 0 1 1 Q9ULI0;B3KWS5;H7BYF1 Q9ULI0 Q9ULI0 ATAD2B ATPase family AAA domain-containing protein 2B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 642.611 3 636.933475 1907.7786 76168.07 1.0383 0.00066132 0.23672 0.00015078 1.275 0.0008121 637.26778394597 642.2765617637 17.467 0.2539 17.467 17.326 17.58 0 57 9 9 0 0 0 0.00011826 1 4665 47.499 37.399 3 1.2924 1.0011 0 41400000 18539000 22861000 1478 1237 750 832 2357 2357 2532 EKQDEQVGLPGK 12 2 0 Unmodified _EKQDEQVGLPGK_ 0 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 443.2344 3 443.233258 1326.67794 91596.18 0.19917 8.828E-05 0.097213 4.3088E-05 0.29639 0.00013137 443.233353740314 448.575997336255 26.656 0.25691 26.656 26.493 26.75 1.9073E-06 55 11 7 0 0 0 0.021192 1 12696 37.144 21.772 1 1.4461 1.2001 0 16098000 6673200 9424700 1479 962 751 833 2358 2358 EKQDEQVGLPGK 12 2 0 Unmodified _EKQDEQVGLPGK_ 0 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 672.3605 2 664.346249 1326.67794 74701.73 0.97719 0.00064919 -0.0069357 -4.6077E-06 0.97026 0.00064459 664.346072430797 672.360491063549 26.653 0.31478 26.653 26.455 26.77 0 70 14 8 0 0 0 1.2875E-93 2 12723 197.94 183.64 1 1.3253 1.0787 0 24522000 10956000 13566000 1480 962 751 833 2359;2360 2359 EKTPELPEPSVK 12 2 0 Phospho (STY) _EKT(ph)PELPEPSVK_ EKT(1)PELPEPSVK EKT(82.28)PELPEPS(-82.28)VK 0 0 1 1 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3;E9PCT1;M0R088;B4DED5 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 725.3648 2 717.349815 1432.68508 72238.23 0.74501 0.00053443 0.90593 0.00064987 1.6509 0.0011843 717.350876560552 725.364059398471 78.401 1.2729 78.401 77.755 79.028 0 364 114 5 0 0 0 1.3503E-05 1 40852 93.649 93.649 2 1.0757 1.3634 0 69047000 35354000 33693000 1481 353 752 834 2361 2361 2692 EKTPELPEPSVK 12 2 0 Phospho (STY) _EKT(ph)PELPEPSVK_ EKT(1)PELPEPSVK EKT(39.71)PELPEPS(-39.71)VK 0 0 1 1 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3;E9PCT1;M0R088;B4DED5 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 717.351 2 717.349815 1432.68508 72136.38 1.0699 0.00076751 0.14034 0.00010067 1.2103 0.00086818 717.349924195195 725.363967692254 69.264 1.4164 69.264 68.65 70.067 0 707 122 9 0 0 0 0.01174 2 43485 63.181 49.589 2 0.4647 0.34814 0 89584000 60179000 29405000 1482 353 752 834 2362;2363 2363 2692 EKYEITEQR 9 1 1 Unmodified _EKYEITEQR_ 0 0 0 1 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B4DRX3;B2R4K7 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 598.3019 2 598.30131 1194.58807 78856.22 0.53236 0.00031851 0.19534 0.00011687 0.7277 0.00043538 598.301274038731 607.312765595252 73.04 0.89505 73.04 72.588 73.483 0 252 76 4 0 0 0 0.00074124 1 36888 83.783 64.689 1 0.93794 1.0974 0 35924000 17668000 18256000 1483 199 753 835 2364 2364 EKYEITEQR 9 1 1 Unmodified _EKYEITEQR_ 0 0 0 1 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B4DRX3;B2R4K7 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 598.3018 2 598.30131 1194.58807 78017.81 0.30621 0.00018321 0.75534 0.00045192 1.0616 0.00063513 598.301591809067 607.313066438912 22.681 0.33719 22.681 22.538 22.875 0 68 18 6 0 0 0 0.00011772 3 9272 107.15 82.163 1 0.88874 0.67851 0 18372000 9242000 9130200 1484 199 753 835 2365;2366;2367 2365 ELALPLFSPATASR 14 0 1 Phospho (STY) _ELALPLFS(ph)PATASR_ ELALPLFS(0.761)PAT(0.19)AS(0.049)R ELALPLFS(6.02)PAT(-6.02)AS(-11.94)R 0 0 1 0 Q5VWG9 Q5VWG9 Q5VWG9 TAF3 Transcription initiation factor TFIID subunit 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 781.8954 2 776.892181 1551.76981 70876.71 0.55917 0.00043441 0.2861 0.00022227 0.84527 0.00065668 776.892440628141 781.896589184411 132.52 0.41759 132.52 132.34 132.76 0 114 35 5 0 0 0 0.0025476 1 80621 62.162 39.476 3 0.34457 0.37593 0 5036700 3581200 1455500 1485 1112 754 836 2368 2368 2103 ELDALDANDELTPLGR 16 0 1 Unmodified _ELDALDANDELTPLGR_ 0 0 0 0 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 876.4404 2 871.43378 1740.85301 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.69 1 112.69 112.19 113.19 -7.6294E-06 0 0 0 0.00034232 1 66877 56.951 39.584 1 1486 1040 755 837 2369 2369 ELDEEGSDPPLPGR 14 0 1 Phospho (STY) _ELDEEGS(ph)DPPLPGR_ ELDEEGS(1)DPPLPGR ELDEEGS(45.37)DPPLPGR 0 0 1 0 A0A024R836;C9JQV0;Q9BRJ6;H7C0T1;H7C2R9 A0A024R836 A0A024R836 MGC11257;C7orf50 Uncharacterized protein C7orf50 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 801.3449 2 795.8378 1589.66105 67843.21 1.0053 0.00080009 0.16288 0.00012962 1.1682 0.00092972 795.837886211896 800.841738916478 75.86 0.98457 75.86 75.485 76.47 0 260 86 4 0 0 0 0.0030483 1 39008 45.368 26.928 1 0.69145 0.86091 0 37263000 22229000 15034000 1487 146 756 838 2370 2370 218 ELDLSELDDPDSAYLQEAR 19 0 1 Phospho (STY) _ELDLS(ph)ELDDPDSAYLQEAR_ ELDLS(1)ELDDPDSAYLQEAR ELDLS(39.04)ELDDPDS(-39.04)AY(-41.96)LQEAR 0 0 1 0 Q53F85;B2R7M0;A8K822;A0A024RCS3;B4E1C1;Q9UER7;Q59FG7 Q53F85 Q53F85 DAXX Death domain-associated protein 6 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1129.9902 2 1129.98866 2257.96277 56877.2 0.60581 0.00068456 1.839 0.002078 2.4448 0.0027626 1129.98912796433 1135.49610538499 134.26 0.28873 134.26 134.13 134.42 0 91 23 7 0 0 0 0.00010291 1 86609 45.876 45.876 3 0.87531 0.66288 0 19435000 9507100 9928200 1488 215 757 839 2371 2371 337 ELEDATETADAMNR 14 0 1 Oxidation (M) _ELEDATETADAM(ox)NR_ ELEDATETADAM(1)NR ELEDATETADAM(112.13)NR 0 1 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 796.3428 2 791.338491 1580.66243 69379.88 0.74531 0.00058979 -0.026405 -2.0895E-05 0.7189 0.00056889 791.339010169286 796.342582498715 50.524 0.6513 50.524 50.133 50.784 0 199 55 5 0 0 0 4.0629E-17 1 20313 112.13 75.432 1 1.9927 2.2593 0 10946000 3606500 7340000 1489 49 758 840 2372 2372 8 ELEDSPQENVSVTEIIKPCDDPK 23 2 0 Phospho (STY) _ELEDS(ph)PQENVSVTEIIKPCDDPK_ ELEDS(0.991)PQENVS(0.007)VT(0.002)EIIKPCDDPK ELEDS(21.31)PQENVS(-21.31)VT(-27.28)EIIKPCDDPK 0 0 1 1 Q5F1R6 Q5F1R6 Q5F1R6 DNAJC21 DnaJ homolog subfamily C member 21 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 913.7548 3 908.077017 2721.20922 63991.64 0.91692 0.00083264 -0.87768 -0.000797 0.039246 3.5639E-05 908.4101541471 913.420563446479 107.78 1.1308 107.78 107.13 108.26 0 476 85 9 0 0 0 1.2867E-08 1 63065 53.705 45.901 3 0.86344 1.0794 0 42456000 25631000 16825000 1490 1095 759 841 2373 2373 2064 ELEELSLEAQGIK 13 1 0 Phospho (STY) _ELEELS(ph)LEAQGIK_ ELEELS(1)LEAQGIK ELEELS(121.56)LEAQGIK 0 0 1 0 A0JLR8;Q05CQ1;Q8N5A0;A0A087WUT6;O60841 A0JLR8 A0JLR8 EIF5B Eukaryotic translation initiation factor 5B MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 769.8706 2 769.871111 1537.72767 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.73 1 105.73 105.23 106.23 0 0 0 0 2.6913E-08 1 61402 121.56 87.798 1 1491 248 760 842 2374 2374 390 ELEELSLEAQGIK 13 1 0 Phospho (STY) _ELEELS(ph)LEAQGIK_ ELEELS(1)LEAQGIK ELEELS(76.59)LEAQGIK 0 0 1 0 A0JLR8;Q05CQ1;Q8N5A0;A0A087WUT6;O60841 A0JLR8 A0JLR8 EIF5B Eukaryotic translation initiation factor 5B MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 769.8707 2 769.871111 1537.72767 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.12 1 112.12 111.62 112.62 0 0 0 0 1.4182E-05 1 72140 76.588 44.334 1 1492 248 760 842 2375 2375 390 ELEEVSPETPVVPATTQR 18 0 1 Phospho (STY) _ELEEVS(ph)PETPVVPATTQR_ ELEEVS(0.979)PET(0.02)PVVPATTQR ELEEVS(16.82)PET(-16.82)PVVPAT(-35.34)T(-35.34)QR 0 0 1 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1036.9958 2 1031.49064 2060.96673 60581.18 0.69979 0.00072183 -0.22937 -0.00023659 0.47042 0.00048524 1031.9918263485 1036.49435420878 95.002 0.78926 95.002 94.695 95.485 0 275 65 6 0 0 0 3.288E-05 1 53106 52.555 52.555 4 2.7135 3.4184 0 56065000 17382000 38682000 1493 1070 761 843 2376 2376 2014 ELEIESQTEEQPTTK 15 1 0 Phospho (STY) _ELEIES(ph)QTEEQPTTK_ ELEIES(0.791)QT(0.185)EEQPT(0.012)T(0.012)K ELEIES(6.32)QT(-6.32)EEQPT(-18.16)T(-18.16)K 0 0 1 0 B4DSL9;B3KQ21;Q9NYH9;B3KX32 B4DSL9 B4DSL9 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 921.41 2 921.406244 1840.79793 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.537 1 67.537 67.037 68.037 7.6294E-06 0 0 0 0.00011609 1 33230 57.328 34.092 4 1494 591 762 844 2377 2377 975 ELFQTPDHTEESTTDDK 17 1 0 Phospho (STY) _ELFQT(ph)PDHTEESTTDDK_ ELFQT(1)PDHTEESTTDDK ELFQT(43.44)PDHT(-43.44)EES(-76.1)T(-82.57)T(-88.79)DDK 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1037.42 2 1036.92025 2071.82594 59853.91 0.52251 0.0005418 -0.29499 -0.00030588 0.22752 0.00023592 1037.42156556499 1040.9270226925 72.023 1.33 72.023 71.258 72.588 0 546 116 7 0 0 0 4.0931E-29 3 36462 120.66 105.46 5 1.1623 1.4457 0 81625000 36449000 45177000 1495 994 763 845 2378;2379;2380 2380 2891 ELFQTPDHTEESTTDDK 17 1 0 Phospho (STY) _ELFQT(ph)PDHTEESTTDDK_ ELFQT(0.996)PDHT(0.004)EESTTDDK ELFQT(24.43)PDHT(-24.43)EES(-44.74)T(-43.34)T(-48.56)DDK 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 691.6158 3 691.615923 2071.82594 72613.7 0.64762 0.0004479 -0.048886 -3.381E-05 0.59873 0.00041409 691.950095478055 694.287200302058 72.03 1.3138 72.03 71.314 72.628 0 707 113 8 0 0 0 9.2215E-17 4 36564 103.9 103.9 5 1.2132 1.5053 0 112030000 50834000 61194000 1496 994 763 845 2381;2382;2383;2384 2384 2891 ELFQTPDHTEESTTDDK 17 1 0 Phospho (STY) _ELFQT(ph)PDHTEESTTDDK_ ELFQT(1)PDHTEESTTDDK ELFQT(51.81)PDHT(-51.81)EES(-75)T(-81.33)T(-87.57)DDK 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 694.2881 3 691.615923 2071.82594 72571.63 0.87521 0.00060531 0.28839 0.00019946 1.1636 0.00080477 691.950342840975 694.287512442766 61.522 3.0311 61.522 60.522 63.553 0 1688 283 9 0 0 0 4.2752E-63 4 37972 166.28 155.68 5 3.2166 2.1503 0 146300000 34700000 111600000 1497 994 763 845 2385;2386;2387;2388 2385 2891 ELFQTPDHTEESTTDDK 17 1 0 Unmodified _ELFQTPDHTEESTTDDK_ 0 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 667.9671 3 664.96048 1991.85961 74692.87 0.87661 0.00058291 -0.25892 -0.00017217 0.61769 0.00041074 664.960350186256 667.631736633605 78.379 1.3319 78.379 77.879 79.211 0 568 117 7 0 0 0 2.6662E-10 5 41412 89.468 79.711 1 1.8681 2.3207 0 95790000 32378000 63412000 1498 994 763 846 2389;2390;2391;2392;2393 2393 ELFQTPDHTEESTTDDK 17 1 0 Unmodified _ELFQTPDHTEESTTDDK_ 0 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 667.9665 3 664.96048 1991.85961 NaN NaN NaN -0.24633 -0.0001638 NaN NaN NaN NaN 54.915 2.4899 54.915 53.647 56.137 3.8147E-06 0 0 0 4.5213E-06 1 33800 62.475 39.467 1 NaN NaN 0 13262000 0 13262000 1499 994 763 846 2394 2394 ELFQTPGHTEEAVAAGK 17 1 0 Unmodified _ELFQTPGHTEEAVAAGK_ 0 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 598.6388 3 595.631969 1783.87408 79221.14 0.86152 0.00051315 0.23016 0.00013709 1.0917 0.00065024 595.967384557908 598.302958075817 92.559 0.89875 92.559 91.913 92.812 0 122 80 4 0 0 0 0.00077655 1 51268 49.537 49.537 1 1.5462 1.9402 0 27844000 7171500 20673000 1500 994 764 847 2395 2395 ELFQTPGHTEELVAAGK 17 1 0 Unmodified _ELFQTPGHTEELVAAGK_ 0 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 612.3194 3 609.647619 1825.92103 80762.32 0.75547 0.00046057 -0.022746 -1.3867E-05 0.73273 0.00044671 609.981830053593 612.319080685686 106.22 0.60864 106.22 106.03 106.64 -7.6294E-06 152 39 6 0 0 0 2.6229E-05 1 61790 57.595 57.595 1 1.6727 2.0458 0 19606000 8898600 10707000 1501 994 765 848 2396 2396 ELFQTPGHTEESMTDDK 17 1 0 Oxidation (M) _ELFQTPGHTEESM(ox)TDDK_ ELFQTPGHTEESM(1)TDDK ELFQTPGHTEESM(72.58)TDDK 0 1 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 661.2892 3 660.95456 1979.84185 74838.16 0.91468 0.00060456 -0.1774 -0.00011725 0.73728 0.00048731 661.28880814492 663.625809340825 78.059 1.5918 78.059 77.157 78.749 -7.6294E-06 658 143 7 0 0 0 7.4963E-07 2 40777 72.583 53.297 1 2.1633 2.687 0 97933000 27528000 70405000 1502 994 766 849 2397;2398 2398 280 ELFQTPGHTEESMTDDK 17 1 0 Oxidation (M) _ELFQTPGHTEESM(ox)TDDK_ ELFQTPGHTEESM(1)TDDK ELFQTPGHTEESM(47.43)TDDK 0 1 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 994.9377 2 990.928202 1979.84185 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.204 1 78.204 77.704 78.704 0 0 0 0 0.0019483 1 40937 47.429 23.578 1 1503 994 766 849 2399 2399 280 ELFQTPGTDKPTTDEK 16 2 0 Unmodified _ELFQTPGTDKPTTDEK_ 0 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 608.3074 3 602.963384 1805.86832 NaN NaN NaN -0.11342 -6.8386E-05 NaN NaN NaN NaN 82.214 0.36652 82.214 82.135 82.501 0 0 0 0 0.011324 1 43970 41.107 23.092 1 NaN NaN 0 21107000 0 21107000 1504 994 767 850 2400 2400 ELFQTPVCTDKPTTHEK 17 2 0 Unmodified _ELFQTPVCTDKPTTHEK_ 0 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 683.0093 3 677.666573 2029.97789 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.3 1 108.3 107.8 108.8 7.6294E-06 0 0 0 0.014203 1 63451 31.876 9.0729 1 1505 994 768 851 2401 2401 ELGFSSHR 8 0 1 Phospho (STY) _ELGFS(ph)SHR_ ELGFS(0.621)S(0.379)HR ELGFS(2.14)S(-2.14)HR 0 0 1 0 Q05CW7;E9PMU0;E9PJN6;Q9H0A0 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 506.7163 2 506.716031 1011.41751 86187.3 0.2875 0.00014568 0.30435 0.00015422 0.59185 0.0002999 506.716116011283 511.720408339518 65.535 0.41946 65.535 65.286 65.706 0 83 31 4 0 0 0 0.016872 1 31492 54.416 24.943 2 0.56725 0.67071 0 14405000 9528800 4875900 1506 1202;1038 769 852 2402 2402 1930;1931 ELGFSSHR 8 0 1 Phospho (STY) _ELGFSS(ph)HR_ ELGFS(0.21)S(0.79)HR ELGFS(-5.75)S(5.75)HR 0 0 1 0 Q05CW7;E9PMU0;E9PJN6;Q9H0A0 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 506.7165 2 506.716031 1011.41751 86777.37 0.68126 0.0003452 -0.0060977 -3.0898E-06 0.67516 0.00034211 506.71596865883 511.720139428701 33.97 0.54924 33.97 33.718 34.268 0 187 46 6 0 0 0 0.0064961 2 18592 82.029 50.158 2 0.95034 0.73016 0 17305000 8828300 8477000 1507 1202;1038 769 852 2403;2404 2403 1930;1931 ELGFSSHR 8 0 1 Unmodified _ELGFSSHR_ 0 0 0 0 Q05CW7;E9PMU0;E9PJN6;Q9H0A0 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 471.7374 2 466.732866 931.451179 87669.05 0.26085 0.00012175 -0.08814 -4.1138E-05 0.17271 8.061E-05 466.73273755716 471.736891463188 79.435 1.5003 79.435 78.677 80.177 0 531 134 6 0 0 0 0.010839 3 41736 96.253 37.048 1 0.92453 1.1682 0 152740000 80960000 71779000 1508 1202;1038 769 853 2405;2406;2407 2406 ELGITALHIK 10 1 0 Unmodified _ELGITALHIK_ 0 0 0 0 P62263;H0YB22;E5RH77;A4D1M5 P62263 P62263 RPS14;LOC401404 40S ribosomal protein S14 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 547.8326 2 547.832049 1093.64954 84305.35 0.55637 0.0003048 0.030363 1.6634E-05 0.58673 0.00032143 547.831996631938 551.839166954881 120.68 1.2421 120.68 120.03 121.27 7.6294E-06 286 105 4 0 0 0 0.0051593 1 72815 76.679 50.785 1 0.84869 1.009 0 11627000 5336000 6291400 1509 1017 770 854 2408 2408 ELGITALHIK 10 1 0 Unmodified _ELGITALHIK_ 0 0 0 0 P62263;H0YB22;E5RH77;A4D1M5 P62263 P62263 RPS14;LOC401404 40S ribosomal protein S14 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 547.8325 2 547.832049 1093.64954 NaN NaN NaN NaN NaN NaN NaN NaN NaN 120.02 1 120.02 119.52 120.52 0 0 0 0 0.0048216 1 72224 63.419 33.846 1 1510 1017 770 854 2409 2409 ELGPLPDDDDMASPK 15 1 0 Oxidation (M),Phospho (STY) _ELGPLPDDDDM(ox)AS(ph)PK_ ELGPLPDDDDM(1)ASPK ELGPLPDDDDMAS(1)PK ELGPLPDDDDM(53.4)ASPK ELGPLPDDDDMAS(53.4)PK 0 1 1 0 E7EVG2;Q86U86;H0Y5B5 E7EVG2 E7EVG2 PBRM1 Protein polybromo-1 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 848.8474 2 848.3446 1694.67465 NaN NaN NaN 0.0045948 3.898E-06 NaN NaN NaN NaN 85.689 0.94973 85.689 85.267 86.217 0 0 0 0 0.00039691 1 54873 53.395 36.764 1 NaN NaN 0 45828000 45828000 0 1511 794 771 855 2410 2410 215 1365 ELHENVLDK 9 1 0 Unmodified _ELHENVLDK_ 0 0 0 0 O43719;B4DRS4 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 552.7935 2 548.785296 1095.55604 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.158 1 80.158 79.658 80.658 0 0 0 0 0.019254 1 42413 47.869 9.7084 1 1512 927 772 856 2411 2411 ELILFSNSDNER 12 0 1 Unmodified _ELILFSNSDNER_ 0 0 0 0 P11388;Q71UH4;Q02880;Q59H80;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 723.859 2 718.854438 1435.69432 NaN NaN NaN 0.17141 0.00012322 NaN NaN NaN NaN 106.19 1.0734 106.19 105.56 106.63 0 0 0 0 5.2898E-73 1 61642 161.17 100.2 1 NaN NaN 0 25163000 0 25163000 1513 962;1032 773 857 2412 2412 ELILFSNSDNER 12 0 1 Unmodified _ELILFSNSDNER_ 0 0 0 0 P11388;Q71UH4;Q02880;Q59H80;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 718.8575 2 718.854438 1435.69432 NaN NaN NaN 1.4168 0.0010185 NaN NaN NaN NaN 106.19 0.93011 106.19 105.69 106.62 -7.6294E-06 0 0 0 2.033E-15 2 61654 106.16 72.072 1 NaN NaN 0 27088000 27088000 0 1514 962;1032 773 857 2413;2414 2413 ELILFSNSDNER 12 0 1 Unmodified _ELILFSNSDNER_ 0 0 0 0 P11388;Q71UH4;Q02880;Q59H80;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 719.858 2 718.854438 1435.69432 72680.62 1.0755 0.00077311 -0.15512 -0.00011151 0.92035 0.0006616 718.854322005729 723.858548957183 101.67 1.2615 101.67 101.11 102.37 0 478 117 8 0 0 0 0.00044061 3 65444 107.79 89.348 1 1.3424 0.9179 0 50088000 20913000 29175000 1515 962;1032 773 857 2415;2416;2417 2416 ELILGSETPSSPR 13 0 1 Phospho (STY) _ELILGSETPS(ph)SPR_ ELILGSET(0.002)PS(0.714)S(0.284)PR ELILGS(-53.91)ET(-25.54)PS(4.01)S(-4.01)PR 0 0 1 0 B4DVI0;R4GNJ5;A0A0C4DGT6;Q96AP0 B4DVI0 B4DVI0 ACD Adrenocortical dysplasia protein homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 733.3511 2 733.350346 1464.68614 71480.45 0.97465 0.00071476 0.089388 6.5552E-05 1.064 0.00078031 733.350479929209 738.354476407119 89.171 1.3234 89.171 88.361 89.684 0 658 117 9 0 0 0 3.8908E-80 3 48886 192.14 156.7 4 0.83733 1.0575 0 116940000 62298000 54642000 1516 327 774 858 2418;2419;2420 2420 517;518 ELILGSETPSSPR 13 0 1 Phospho (STY) _ELILGSETPS(ph)SPR_ ELILGS(0.122)ET(0.082)PS(0.398)S(0.398)PR ELILGS(-5.14)ET(-6.87)PS(0)S(0)PR 0 0 1 0 B4DVI0;R4GNJ5;A0A0C4DGT6;Q96AP0 B4DVI0 B4DVI0 ACD Adrenocortical dysplasia protein homolog ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 738.8563 2 733.350346 1464.68614 NaN NaN NaN 0.84854 0.00062227 NaN NaN NaN NaN 88.356 0.099472 88.356 88.32 88.42 0 0 0 0 0.010768 1 48227 41.56 16.001 4 NaN NaN 0 5671800 0 5671800 1517 327 774 858 2421 2421 517;518 ELILGSETPSSPR 13 0 1 Phospho (STY) _ELILGSETPS(ph)SPR_ ELILGSET(0.02)PS(0.49)S(0.49)PR ELILGS(-59.49)ET(-13.92)PS(0)S(0)PR 0 0 1 0 B4DVI0;R4GNJ5;A0A0C4DGT6;Q96AP0 B4DVI0 B4DVI0 ACD Adrenocortical dysplasia protein homolog MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 738.3556 2 733.350346 1464.68614 71426.98 1.0251 0.00075178 0.06469 4.7441E-05 1.0898 0.00079922 733.350479008602 738.354573956878 92.004 1.8747 92.004 91.131 93.006 0 1079 184 9 0 0 0 4.7015E-33 3 59385 150.22 131.9 4 1.635 1.093 0 131470000 51625000 79846000 1518 327 774 858 2422;2423;2424 2424 517;518 ELLDTSFEDLSK 12 1 0 Phospho (STY) _ELLDT(ph)SFEDLSK_ ELLDT(0.563)S(0.437)FEDLS(0.001)K ELLDT(1.1)S(-1.1)FEDLS(-27.81)K 0 0 1 0 P78345 P78345 P78345 RPP38 Ribonuclease P protein subunit p38 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 738.8306 2 738.828912 1475.64327 71065.67 0.81522 0.00060231 0.17332 0.00012806 0.98855 0.00073037 738.828863812653 742.836054867742 114.51 0.80552 114.51 114.12 114.93 0 379 72 8 0 0 0 0.00039461 2 68004 90.731 73.218 3 1.2969 1.64 0 45000000 19026000 25975000 1519 1025 775 859 2425;2426 2425 1852;2905 ELLDTSFEDLSK 12 1 0 Phospho (STY) _ELLDTS(ph)FEDLSK_ ELLDT(0.063)S(0.922)FEDLS(0.014)K ELLDT(-11.64)S(11.64)FEDLS(-18.08)K 0 0 1 0 P78345 P78345 P78345 RPP38 Ribonuclease P protein subunit p38 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 738.8288 2 738.828912 1475.64327 71549.03 1.1483 0.00084843 0.19825 0.00014647 1.3466 0.0009949 738.828882782723 742.836203863585 122.04 0.71074 122.04 121.7 122.41 0 340 65 8 0 0 0 0.00053893 2 78782 82.202 66.936 3 1.4454 1.0184 0 22483000 9953600 12530000 1520 1025 775 859 2427;2428 2428 1852;2905 ELLVPQHTVQLVGGLSPLSSPSDTK 25 1 0 2 Phospho (STY) _ELLVPQHTVQLVGGLS(ph)PLSS(ph)PSDTK_ ELLVPQHT(0.023)VQLVGGLS(0.876)PLS(0.269)S(0.563)PS(0.184)DT(0.085)K ELLVPQHT(-15.93)VQLVGGLS(10.52)PLS(-3.82)S(3.82)PS(-5.21)DT(-10.26)K 0 0 2 0 B4DQZ7 B4DQZ7 B4DQZ7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 924.795 3 921.451957 2761.33404 63894.1 0.63351 0.00058375 0.54157 0.00049903 1.1751 0.0010828 921.786751297622 924.458250360294 128.91 0.85622 128.91 128.37 129.22 0 516 72 10 0 0 0 7.6099E-09 1 78046 48.077 41.713 15 1.152 1.4544 0 47177000 20892000 26285000 1521 652 776 860 2429 2429 1081;1082 ELLVSALQELESSTSNSPSNK 21 1 0 Phospho (STY) _ELLVSALQELESSTSNS(ph)PSNK_ ELLVSALQELES(0.011)S(0.033)T(0.108)S(0.36)NS(0.381)PS(0.108)NK ELLVS(-39.65)ALQELES(-15.24)S(-10.61)T(-5.48)S(-0.25)NS(0.25)PS(-5.48)NK 0 0 1 0 B3KUY5;Q4G0L8;A0A087WVI0;E9PBL8;Q8WTW3 B3KUY5 B3KUY5 COG1 Conserved oligomeric Golgi complex subunit 1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1161.5547 2 1157.04651 2312.07847 NaN NaN NaN -0.13693 -0.00015843 NaN NaN NaN NaN 132.87 0.45833 132.87 132.59 133.05 0 0 0 0 5.0035E-06 1 80860 52.185 39.917 7 NaN NaN 0 2831800 0 2831800 1522 254 777 861 2430 2430 400 ELMRGEEGRPGK 12 1 2 Oxidation (M) _ELM(ox)RGEEGRPGK_ ELM(1)RGEEGRPGK ELM(42.63)RGEEGRPGK 0 1 0 2 B3KY63;F5GWX5;A0A0C4DGG9;Q14839 B3KY63 B3KY63 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 458.8984 3 458.897992 1373.67215 87724.41 0.10395 4.7702E-05 0.024625 1.13E-05 0.12857 5.9002E-05 458.898015085615 468.241545308716 65.734 0.44642 65.734 65.545 65.992 0 196 34 9 0 0 0 0.0080219 1 31683 42.629 42.629 1 0.8873 1.0489 0 200050000 107340000 92716000 1523 324 778 862 2431 2431 78 ELNLTEHFGK 10 1 0 Unmodified _ELNLTEHFGK_ 0 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 598.3155 2 594.306395 1186.59824 NaN NaN NaN 0.16277 9.6736E-05 NaN NaN NaN NaN 100.66 0.28335 100.66 100.53 100.82 0 0 0 0 3.8434E-05 1 57778 85.67 47.584 1 NaN NaN 0 5962500 0 5962500 1524 938 779 863 2432 2432 ELPAAEPVLSPLEGTK 16 1 0 Phospho (STY) _ELPAAEPVLS(ph)PLEGTK_ ELPAAEPVLS(0.942)PLEGT(0.058)K ELPAAEPVLS(12.1)PLEGT(-12.1)K 0 0 1 0 Q96DI9;F6VRR5;B4E0L0;Q9BY77;B4DMM2 Q96DI9 Q96DI9 POLDIP3 Polymerase delta-interacting protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 865.9345 2 865.934243 1729.85393 65792.27 0.77135 0.00066794 -0.012078 -1.0459E-05 0.75928 0.00065748 866.435636379304 869.941197501348 115.49 0.54458 115.49 115.22 115.77 -7.6294E-06 235 46 7 0 0 0 6.2684E-07 2 68802 80.387 61.329 2 0.69049 0.87426 0 43464000 23034000 20430000 1525 676 780 864 2433;2434 2434 1120;2795 ELPAAEPVLSPLEGTK 16 1 0 Phospho (STY) _ELPAAEPVLS(ph)PLEGTK_ ELPAAEPVLS(0.802)PLEGT(0.198)K ELPAAEPVLS(6.06)PLEGT(-6.06)K 0 0 1 0 Q96DI9;F6VRR5;B4E0L0;Q9BY77;B4DMM2 Q96DI9 Q96DI9 POLDIP3 Polymerase delta-interacting protein 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 870.4442 2 865.934243 1729.85393 65560.71 1.074 0.00093004 0.086927 7.5273E-05 1.161 0.0010053 865.934368486634 869.941364537197 122.97 0.79694 122.97 122.62 123.42 0 515 73 10 0 0 0 0.00013435 2 79370 69.485 57.2 2 1.0495 0.69506 0 69855000 35785000 34070000 1526 676 780 864 2435;2436 2435 1120;2795 ELPRPVLEGQQSER 14 0 2 Unmodified _ELPRPVLEGQQSER_ 0 0 0 1 Q9BVJ6;B4E343;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 546.6252 3 546.625037 1636.85328 NaN NaN NaN -0.17295 -9.454E-05 NaN NaN NaN NaN 89.533 0.36212 89.533 89.354 89.716 0 0 0 0 0.026436 1 49046 39.033 24.68 1 NaN NaN 0 7856800 7856800 0 1527 1199 781 865 2437 2437 ELPRPVLEGQQSER 14 0 2 Unmodified _ELPRPVLEGQQSER_ 0 0 0 1 Q9BVJ6;B4E343;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6 Q9BVJ6 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 553.298 3 546.625037 1636.85328 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.229 1 89.229 88.729 89.729 0 0 0 0 0.023922 1 48847 31.827 18.709 1 1528 1199 781 865 2438 2438 ELQGDGPPSSPTNDPTVK 18 1 0 Phospho (STY) _ELQGDGPPSS(ph)PTNDPTVK_ ELQGDGPPS(0.156)S(0.688)PT(0.156)NDPTVK ELQGDGPPS(-6.46)S(6.46)PT(-6.46)NDPT(-31.42)VK 0 0 1 0 Q12873 Q12873 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 959.9258 2 959.925135 1917.83572 61943.98 0.37821 0.00036305 -0.30339 -0.00029123 0.074823 7.1824E-05 960.426661410762 963.932286523311 57.86 1.2925 57.86 57.232 58.524 -3.8147E-06 889 103 13 0 0 0 4.7434E-38 3 25716 133.78 119.02 4 0.77636 0.96137 0 175470000 94972000 80501000 1529 1045 782 866 2439;2440;2441 2440 1951 ELQSQISDTSVVLSMD 16 0 0 Oxidation (M),Phospho (STY) _ELQSQISDTSVVLS(ph)M(ox)D_ ELQSQISDTSVVLSM(1)D ELQSQIS(0.004)DT(0.004)S(0.01)VVLS(0.982)MD ELQSQISDTSVVLSM(42.57)D ELQS(-36.75)QIS(-24.18)DT(-24.18)S(-19.71)VVLS(19.71)MD 0 1 1 0 F8W1U3 F8W1U3 F8W1U3 KRT8 MSMS -1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 924.4029 2 924.402647 1846.79074 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.44 1 105.44 104.94 105.94 0 0 0 0 0.0027351 1 61172 42.568 30.008 5 1530 832 783 867 2442 2442 227 1438 ELQSQISDTSVVLSMDNSR 19 0 1 Oxidation (M),Phospho (STY) _ELQSQISDTSVVLSM(ox)DNS(ph)R_ ELQSQISDTSVVLSM(1)DNSR ELQSQISDTSVVLS(0.395)MDNS(0.604)R ELQSQISDTSVVLSM(98.51)DNSR ELQS(-78.14)QIS(-33.33)DT(-33.33)S(-33.33)VVLS(-1.84)MDNS(1.84)R 0 1 1 0 CON__P05787;P05787;Q969I0;Q7L4M3;F8VUG2;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1103.493 2 1102.99068 2203.96681 57933.46 0.16074 0.00017729 -0.22336 -0.00024637 -0.062626 -6.9076E-05 1102.99071483619 1107.99470256662 92.178 1.0031 92.178 91.738 92.741 0 517 89 9 0 0 0 9.031E-18 3 51115 98.507 82.742 6 1.5834 1.9997 0 114360000 44767000 69597000 + 1531 754 784 868 2443;2444;2445 2444 201 1268;1269;1270;1271;2808 ELQSQISDTSVVLSMDNSR 19 0 1 Oxidation (M),Phospho (STY) _ELQSQISDTS(ph)VVLSM(ox)DNSR_ ELQSQISDTSVVLSM(1)DNSR ELQSQIS(0.001)DT(0.034)S(0.964)VVLS(0.001)MDNSR ELQSQISDTSVVLSM(147.17)DNSR ELQS(-75.57)QIS(-28.86)DT(-14.53)S(14.53)VVLS(-31.11)MDNS(-57.68)R 0 1 1 0 CON__P05787;P05787;Q969I0;Q7L4M3;F8VUG2;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1107.9967 2 1102.99068 2203.96681 57302.86 0.7931 0.00087478 0.13445 0.0001483 0.92755 0.0010231 1103.49227182322 1107.99522851872 93.537 0.93108 93.537 93.133 94.064 0 525 76 10 0 0 0 1.9288E-55 2 52083 147.17 132.72 6 1.784 2.2546 0 170540000 62169000 108370000 + 1532 754 784 868 2446;2447 2447 201 1268;1269;1270;1271;2808 ELQSQISDTSVVLSMDNSR 19 0 1 Oxidation (M),Phospho (STY) _ELQSQISDTSVVLSM(ox)DNS(ph)R_ ELQSQISDTSVVLSM(1)DNSR ELQSQISDTSVVLS(0.022)MDNS(0.978)R ELQSQISDTSVVLSM(120.9)DNSR ELQS(-91.8)QIS(-55.72)DT(-55.72)S(-47.94)VVLS(-16.46)MDNS(16.46)R 0 1 1 0 CON__P05787;P05787;Q969I0;Q7L4M3;F8VUG2;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1108.4969 2 1102.99068 2203.96681 57831.57 0.88373 0.00097475 -0.073839 -8.1444E-05 0.80989 0.0008933 1103.49220374875 1107.99484794348 97.19 1.7743 97.19 96.187 97.961 0 954 147 10 0 0 0 1.9427E-36 4 54992 120.9 105.14 6 1.6622 2.1 0 142120000 55094000 87026000 + 1533 754 784 868 2448;2449;2450;2451 2449 201 1268;1269;1270;1271;2808 ELQSQISDTSVVLSMDNSR 19 0 1 Oxidation (M),Phospho (STY) _ELQSQIS(ph)DTSVVLSM(ox)DNSR_ ELQSQISDTSVVLSM(1)DNSR ELQS(0.001)QIS(0.33)DT(0.33)S(0.33)VVLS(0.008)MDNSR ELQSQISDTSVVLSM(61.42)DNSR ELQS(-27.22)QIS(0)DT(0)S(0)VVLS(-16.31)MDNS(-31.62)R 0 1 1 0 CON__P05787;P05787;Q969I0;Q7L4M3;F8VUG2;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1103.4924 2 1102.99068 2203.96681 57041.47 0.78361 0.00086432 -0.42031 -0.0004636 0.3633 0.00040072 1103.49156008933 1108.49625433608 99.922 0.90594 99.922 99.444 100.35 7.6294E-06 543 86 9 0 0 0 2.8509E-07 1 64146 61.423 55.969 6 1.6631 1.1854 0 29641000 11367000 18274000 + 1534 754 784 868 2452 2452 201 1268;1269;1270;1271;2808 ELQSQISDTSVVLSMDNSR 19 0 1 Oxidation (M),Phospho (STY) _ELQSQISDTSVVLS(ph)M(ox)DNSR_ ELQSQISDTSVVLSM(1)DNSR ELQSQISDTSVVLS(0.5)MDNS(0.5)R ELQSQISDTSVVLSM(67.65)DNSR ELQS(-60.8)QIS(-43.85)DT(-39.97)S(-32.01)VVLS(0)MDNS(0)R 0 1 1 0 CON__P05787;P05787;Q969I0;Q7L4M3;F8VUG2;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1107.9967 2 1102.99068 2203.96681 NaN NaN NaN -0.11659 -0.0001286 NaN NaN NaN NaN 103.5 1.1686 103.5 102.83 104 0 0 0 0 1.3991E-10 1 66566 67.645 43.358 6 NaN NaN 0 17207000 0 17207000 + 1535 754 784 868 2453 2453 201 1268;1269;1270;1271;2808 ELQSQISDTSVVLSMDNSR 19 0 1 Oxidation (M),2 Phospho (STY) _ELQSQISDTS(ph)VVLS(ph)M(ox)DNSR_ ELQSQISDTSVVLSM(1)DNSR ELQSQIS(0.064)DT(0.154)S(0.782)VVLS(0.986)MDNS(0.013)R ELQSQISDTSVVLSM(100.45)DNSR ELQS(-32.87)QIS(-10.89)DT(-7.07)S(7.07)VVLS(18.73)MDNS(-18.73)R 0 1 2 0 CON__P05787;P05787;Q969I0;Q7L4M3;F8VUG2;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1148.4807 2 1142.97385 2283.93314 56498.8 0.52107 0.00059557 -0.64802 -0.00074067 -0.12695 -0.0001451 1143.47398282991 1147.977837533 92.59 0.97098 92.59 92.111 93.082 0 537 86 8 0 0 0 1.051E-18 3 51162 100.45 87.265 15 1.6434 2.0748 0 94320000 31271000 63049000 + 1536 754 784 869 2454;2455;2456 2455 201 1268;1269;1270;1271;2808 ELQSQISDTSVVLSMDNSR 19 0 1 Oxidation (M),2 Phospho (STY) _ELQSQISDTSVVLS(ph)M(ox)DNS(ph)R_ ELQSQISDTSVVLSM(1)DNSR ELQS(0.002)QIS(0.3)DT(0.3)S(0.322)VVLS(0.549)MDNS(0.527)R ELQSQISDTSVVLSM(40.8)DNSR ELQS(-27.34)QIS(-6.05)DT(-6.05)S(-4.93)VVLS(6.05)MDNS(4.93)R 0 1 2 0 CON__P05787;P05787;Q969I0;Q7L4M3;F8VUG2;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1148.4812 2 1142.97385 2283.93314 57379.69 0.75523 0.0008632 0.18393 0.00021023 0.93916 0.0010734 1143.97609530552 1148.47994768218 96.961 0.99979 96.961 96.514 97.514 0 371 83 8 0 0 0 0.00023701 1 55055 40.798 40.798 15 2.6303 3.3107 0 49449000 17560000 31890000 + 1537 754 784 869 2457 2457 201 1268;1269;1270;1271;2808 ELQSQISDTSVVLSMDNSR 19 0 1 Oxidation (M),3 Phospho (STY) _ELQSQISDTS(ph)VVLS(ph)M(ox)DNS(ph)R_ ELQSQISDTSVVLSM(1)DNSR ELQS(0.01)QIS(0.323)DT(0.391)S(0.434)VVLS(0.921)MDNS(0.921)R ELQSQISDTSVVLSM(47.08)DNSR ELQS(-15.59)QIS(-1.73)DT(-0.59)S(0.59)VVLS(12.33)MDNS(12.33)R 0 1 3 0 CON__P05787;P05787;Q969I0;Q7L4M3;F8VUG2;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1188.4609 2 1182.95701 2363.89947 57770.72 0.62274 0.00073668 0.046921 5.5506E-05 0.66966 0.00079218 1183.45812703942 1187.96125485666 97.246 0.56245 97.246 96.965 97.527 0 253 49 7 0 0 0 1.971E-05 1 54872 47.082 39.712 20 1.5929 2.0034 0 44490000 15715000 28774000 + 1538 754 784 870 2458 2458 201 1268;1269;1270;1271;2808 ELRPQRPK 8 1 2 Unmodified _ELRPQRPK_ 0 0 0 2 B0UZZ8;A8K9A1;A8K806;O15213 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 341.8732 3 341.873447 1022.59851 100224.7 -0.13184 -4.5071E-05 0.21842 7.4674E-05 0.086589 2.9602E-05 341.873471795575 351.217031637026 77.012 2.0853 77.012 75.932 78.018 0 795 185 8 0 0 0 0.0020548 3 40300 71.922 50.327 1 0.79097 0.93274 0 173810000 93657000 80152000 1539 491 785 871 2459;2460;2461 2461 ELSEQLGQAER 11 0 1 Phospho (STY) _ELS(ph)EQLGQAER_ ELS(1)EQLGQAER ELS(52.58)EQLGQAER 0 0 1 0 A0A087X1U6;P58107;A0A075B730 A0A087X1U6 A0A087X1U6 EPPK1 Epiplakin MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 675.3029 2 670.298114 1338.58167 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.75 1 66.75 66.25 67.25 0 0 0 0 0.0039385 1 32620 52.579 14.584 1 1540 273 786 872 2462 2462 435 ELSESVQQQSTPVPLISPK 19 1 0 2 Phospho (STY) _ELSESVQQQST(ph)PVPLIS(ph)PK_ ELS(0.021)ES(0.001)VQQQS(0.184)T(0.796)PVPLIS(0.999)PK ELS(-15.84)ES(-28.59)VQQQS(-6.39)T(6.39)PVPLIS(29.4)PK 0 0 2 0 A0A087WYS3;H7C4X9;A0A087WVZ6;Q9ULU4;A0A087WV57;A6H8Y8;Q5JV90 A0A087WYS3 A0A087WYS3 ZMYND8;DKFZp564P1772 Protein kinase C-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1118.5264 2 1114.01838 2226.02221 59009.55 0.38911 0.00043347 0.47977 0.00053447 0.86887 0.00096794 1114.52125374601 1118.52697880677 106.75 0.85803 106.75 106.34 107.2 0 487 68 9 0 0 0 2.137E-13 1 62042 83.423 74.534 10 0.49304 0.61212 0 103300000 66129000 37168000 1541 258 787 873 2463 2463 406;2667 ELSESVQQQSTPVPLISPK 19 1 0 Phospho (STY) _ELSESVQQQSTPVPLIS(ph)PK_ ELSESVQQQSTPVPLIS(1)PK ELS(-57.53)ES(-60.39)VQQQS(-52.1)T(-41.38)PVPLIS(41.38)PK 0 0 1 0 A0A087WYS3;H7C4X9;A0A087WVZ6;Q9ULU4;A0A087WV57;A6H8Y8;Q5JV90 A0A087WYS3 A0A087WYS3 ZMYND8;DKFZp564P1772 Protein kinase C-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1074.0354 2 1074.03522 2146.05588 59371.51 0.38868 0.00041745 -0.0069493 -7.4638E-06 0.38173 0.00040999 1074.53666247022 1078.54377361668 108.87 0.94003 108.87 108.45 109.39 0 592 75 11 0 0 0 2.067E-17 2 63652 96.143 96.143 5 0.63361 0.78365 0 305900000 185570000 120330000 1542 258 787 874 2464;2465 2465 406;2667 ELSNSPLRENSFGSPLEFR 19 0 2 2 Phospho (STY) _ELSNS(ph)PLRENSFGS(ph)PLEFR_ ELS(0.396)NS(0.521)PLRENS(0.117)FGS(0.966)PLEFR ELS(-1.22)NS(1.22)PLRENS(-7.48)FGS(15.12)PLEFR 0 0 2 1 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 787.0178 3 780.341679 2338.00321 67560.21 0.93055 0.00072615 -0.14285 -0.00011147 0.7877 0.00061468 780.675921436347 787.013873328175 116.99 0.86254 116.99 116.6 117.47 -7.6294E-06 464 77 9 0 0 0 5.0653E-05 1 69828 44.711 33.41 6 1.1789 1.4646 0 62684000 27821000 34863000 1543 383 788 875 2466 2466 605;606 ELSPAALEK 9 1 0 Phospho (STY) _ELS(ph)PAALEK_ ELS(1)PAALEK ELS(99.97)PAALEK 0 0 1 0 B3KNS8;O75683 B3KNS8 B3KNS8 SURF6 Surfeit locus protein 6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 523.2568 2 519.249373 1036.48419 84048.06 0.4589 0.00023829 0.083891 4.356E-05 0.54279 0.00028185 519.249366708993 523.256319344715 76.611 1.7581 76.611 75.785 77.543 0 792 155 7 0 0 0 3.7438E-05 4 39809 106.29 23.752 1 0.87515 1.0813 0 494380000 258110000 236270000 1544 588 789 876 2467;2468;2469;2470 2469 970 ELSPAALEK 9 1 0 Phospho (STY) _ELS(ph)PAALEK_ ELS(1)PAALEK ELS(51.44)PAALEK 0 0 1 0 B3KNS8;O75683 B3KNS8 B3KNS8 SURF6 Surfeit locus protein 6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1045.5063 1 1037.49147 1036.48419 63384.62 0.70472 0.00073114 -0.063616 -6.6001E-05 0.6411 0.00066514 1037.49126296949 1045.50560786182 76.619 0.88686 76.619 76.145 77.032 0 219 75 4 0 0 0 0.0032335 1 39794 51.436 15.895 1 0.86051 1.0621 0 23308000 10841000 12467000 1545 588 789 876 2471 2471 970 ELSPAALEK 9 1 0 Phospho (STY) _ELS(ph)PAALEK_ ELS(1)PAALEK ELS(99.57)PAALEK 0 0 1 0 B3KNS8;O75683 B3KNS8 B3KNS8 SURF6 Surfeit locus protein 6 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 523.2568 2 519.249373 1036.48419 83228.34 0.83939 0.00043585 -0.20686 -0.00010741 0.63253 0.00032844 519.249431250425 523.256200246767 76.187 2.1518 76.187 75.128 77.28 0 1265 194 10 0 0 0 3.9588E-05 6 48626 99.568 25.92 1 1.106 0.73781 0 525100000 252070000 273030000 1546 588 789 876 2472;2473;2474;2475;2476;2477 2475 970 ELSPAALEK 9 1 0 Phospho (STY) _ELS(ph)PAALEK_ ELS(1)PAALEK ELS(64.44)PAALEK 0 0 1 0 B3KNS8;O75683 B3KNS8 B3KNS8 SURF6 Surfeit locus protein 6 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 519.249 2 519.249373 1036.48419 NaN NaN NaN -0.061339 -3.185E-05 NaN NaN NaN NaN 77.333 0.41743 77.333 77.269 77.686 0 0 0 0 0.0053398 1 49519 64.439 17.603 1 NaN NaN 0 3401700 3401700 0 1547 588 789 876 2478 2478 970 ELSPAALEK 9 1 0 Phospho (STY) _ELS(ph)PAALEK_ ELS(1)PAALEK ELS(52.26)PAALEK 0 0 1 0 B3KNS8;O75683 B3KNS8 B3KNS8 SURF6 Surfeit locus protein 6 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 519.2499 2 519.249373 1036.48419 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.183 1 79.183 78.683 79.683 0 0 0 0 0.0068504 1 50630 52.255 23.105 1 1548 588 789 876 2479 2479 970 ELSPPPGLPSK 11 1 0 Phospho (STY) _ELS(ph)PPPGLPSK_ ELS(1)PPPGLPSK ELS(103.33)PPPGLPS(-103.33)K 0 0 1 0 H0YIM6;Q68D13;H0YI78;H0YHT2;A0A024R0V9;A0A1B0GV47;Q7Z4S6 H0YIM6 H0YIM6 KIF21A;DKFZp779C159 Kinesin-like protein;Kinesin-like protein KIF21A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 601.2977 2 601.296854 1200.57916 79020.04 0.57042 0.00034299 0.14797 8.8972E-05 0.71839 0.00043196 601.296809845572 605.304207937829 84.996 1.3791 84.996 84.231 85.61 7.6294E-06 408 129 5 0 0 0 3.5439E-14 3 45928 135.15 113.07 2 0.56523 0.71212 0 50187000 31840000 18347000 1549 34 790 877 2480;2481;2482 2482 43 ELSPPPGLPSK 11 1 0 Phospho (STY) _ELS(ph)PPPGLPSK_ ELS(1)PPPGLPSK ELS(46.25)PPPGLPS(-46.25)K 0 0 1 0 H0YIM6;Q68D13;H0YI78;H0YHT2;A0A024R0V9;A0A1B0GV47;Q7Z4S6 H0YIM6 H0YIM6 KIF21A;DKFZp779C159 Kinesin-like protein;Kinesin-like protein KIF21A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 601.2972 2 601.296854 1200.57916 78295.69 1.0168 0.0006114 0.16785 0.00010093 1.1847 0.00071233 601.296753080687 605.304160266357 87.6 1.3344 87.6 86.91 88.245 0 504 126 6 0 0 0 0.0082195 1 56520 59.038 45.035 2 0.55523 0.41604 0 18800000 11909000 6890600 1550 34 790 877 2483 2483 43 ELSPPRPR 8 0 2 Phospho (STY) _ELS(ph)PPRPR_ ELS(1)PPRPR ELS(53.76)PPRPR 0 0 1 1 Q6P9C2;B2RAL9;Q99956 Q6P9C2 Q6P9C2 DUSP9 Dual specificity protein phosphatase;Dual specificity protein phosphatase 9 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 516.2563 2 516.255324 1030.49609 85959.17 0.51552 0.00026614 0.15522 8.0131E-05 0.67073 0.00034627 516.255382132116 526.263564651563 60.657 0.91394 60.657 60.15 61.064 0 191 63 4 0 0 0 0.013512 1 27534 53.756 31.764 1 0.59326 0.71853 0 17588000 10044000 7544000 1551 547 791 878 2484 2484 906 ELSVEEQIK 9 1 0 Phospho (STY) _ELS(ph)VEEQIK_ ELS(1)VEEQIK ELS(78.77)VEEQIK 0 0 1 0 B4DN52;Q53GG0;Q9UHB6;F8VQE1;F8VS07;B3KTW2 B4DN52 B4DN52 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 581.7778 2 577.770669 1153.52679 80688.73 0.72531 0.00041907 -0.50002 -0.00028889 0.2253 0.00013017 578.271757576329 581.777519403406 76.767 0.5775 76.767 76.519 77.097 7.6294E-06 107 49 4 0 0 0 0.00068471 1 39840 78.77 42.375 1 2.0484 2.5094 0 20452000 6890000 13562000 1552 644 792 879 2485 2485 1063 ELSVEEQIK 9 1 0 Phospho (STY) _ELS(ph)VEEQIK_ ELS(1)VEEQIK ELS(55.87)VEEQIK 0 0 1 0 B4DN52;Q53GG0;Q9UHB6;F8VQE1;F8VS07;B3KTW2 B4DN52 B4DN52 LIMA1 LIM domain and actin-binding protein 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 577.7711 2 577.770669 1153.52679 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.849 1 76.849 76.349 77.349 0 0 0 0 0.004822 1 39918 55.872 30.782 1 1553 644 792 879 2486 2486 1063 ELSVEEQIK 9 1 0 Phospho (STY) _ELS(ph)VEEQIK_ ELS(1)VEEQIK ELS(83.26)VEEQIK 0 0 1 0 B4DN52;Q53GG0;Q9UHB6;F8VQE1;F8VS07;B3KTW2 B4DN52 B4DN52 LIMA1 LIM domain and actin-binding protein 1 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 581.7787 2 577.770669 1153.52679 NaN NaN NaN -0.042227 -2.4398E-05 NaN NaN NaN NaN 77.803 1.0118 77.803 77.193 78.204 0 0 0 0 6.9442E-05 1 49766 83.265 42.236 1 NaN NaN 0 10345000 0 10345000 1554 644 792 879 2487 2487 1063 ELSVEEQIK 9 1 0 Phospho (STY) _ELS(ph)VEEQIK_ ELS(1)VEEQIK ELS(43.08)VEEQIK 0 0 1 0 B4DN52;Q53GG0;Q9UHB6;F8VQE1;F8VS07;B3KTW2 B4DN52 B4DN52 LIMA1 LIM domain and actin-binding protein 1 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 581.7785 2 577.770669 1153.52679 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.153 1 77.153 76.653 77.653 0 0 0 0 0.017309 1 49236 43.083 18.264 1 1555 644 792 879 2488 2488 1063 ELSVEEQIK 9 1 0 Phospho (STY) _ELS(ph)VEEQIK_ ELS(1)VEEQIK ELS(49.42)VEEQIK 0 0 1 0 B4DN52;Q53GG0;Q9UHB6;F8VQE1;F8VS07;B3KTW2 B4DN52 B4DN52 LIMA1 LIM domain and actin-binding protein 1 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 577.7712 2 577.770669 1153.52679 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.444 1 77.444 76.944 77.944 0 0 0 0 0.0095761 1 49442 49.418 24.564 1 1556 644 792 879 2489 2489 1063 ELTTEIDNNIEQISSYK 17 1 0 Unmodified _ELTTEIDNNIEQISSYK_ 0 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 998.989 2 998.989117 1995.96368 NaN NaN NaN 0.064053 6.3989E-05 NaN NaN NaN NaN 111.7 0.34589 111.7 111.52 111.87 0 0 0 0 2.7259E-15 1 66180 100.55 79.301 1 NaN NaN 0 9465600 9465600 0 + 1557 755 793 880 2490 2490 ELTTEIDNNIEQISSYK 17 1 0 Unmodified _ELTTEIDNNIEQISSYK_ 0 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 998.9899 2 998.989117 1995.96368 NaN NaN NaN 0.79436 0.00079356 NaN NaN NaN NaN 115.86 0.56921 115.86 115.54 116.11 0 0 0 0 0.0093595 1 74624 38.189 25.628 1 NaN NaN 0 12241000 12241000 0 + 1558 755 793 880 2491 2491 ELTVDNSFEFEK 12 1 0 Phospho (STY) _ELTVDNS(ph)FEFEK_ ELT(0.006)VDNS(0.994)FEFEK ELT(-22.04)VDNS(22.04)FEFEK 0 0 1 0 H3BMQ2;B3KP47;A0A024R5U8;Q9UHA3 H3BMQ2 H3BMQ2 RSL24D1;C15orf15 Probable ribosome biogenesis protein RLP24 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 769.3279 2 769.326537 1536.63852 69640.02 1.2663 0.00097419 0.27093 0.00020843 1.5372 0.0011826 769.326607575437 773.834986545915 103.02 1.2055 103.02 102.41 103.61 0 344 86 5 0 0 0 2.6231E-09 1 59046 102.73 102.73 2 0.99706 1.2642 0 35327000 21893000 13434000 1559 112 794 881 2492 2492 162 ELTVDNSFEFEK 12 1 0 Phospho (STY) _ELTVDNS(ph)FEFEK_ ELT(0.001)VDNS(0.999)FEFEK ELT(-28.67)VDNS(28.67)FEFEK 0 0 1 0 H3BMQ2;B3KP47;A0A024R5U8;Q9UHA3 H3BMQ2 H3BMQ2 RSL24D1;C15orf15 Probable ribosome biogenesis protein RLP24 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 773.3336 2 769.326537 1536.63852 69794.55 1.3396 0.0010306 -0.2535 -0.00019502 1.0861 0.00083558 769.326431733727 773.333296451406 108.71 1.0852 108.71 108.27 109.35 0 628 108 9 0 0 0 0.00047284 2 69848 83.358 60.828 2 1.0214 0.67291 0 59592000 28440000 31151000 1560 112 794 881 2493;2494 2494 162 ELVSDLSSQFVISPPALR 18 0 1 Phospho (STY) _ELVSDLSSQFVIS(ph)PPALR_ ELVSDLSSQFVIS(1)PPALR ELVS(-103.28)DLS(-84.49)S(-74.32)QFVIS(74.32)PPALR 0 0 1 0 Q8WYP5;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1025.0227 2 1019.51646 2037.01837 60240.62 0.27664 0.00028204 0.62688 0.00063911 0.90352 0.00092115 1020.01841898242 1024.52118874417 133.28 0.71165 133.28 132.93 133.64 0 341 45 11 0 0 0 2.201E-62 2 80946 159.81 144.42 4 1.2391 1.5655 0 145640000 66297000 79345000 1561 1170 795 882 2495;2496 2495 2286 ELVSDLSSQFVISPPALR 18 0 1 Phospho (STY) _ELVSDLSSQFVIS(ph)PPALR_ ELVSDLSSQFVIS(1)PPALR ELVS(-129.49)DLS(-101.18)S(-85.49)QFVIS(85.49)PPALR 0 0 1 0 Q8WYP5;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1020.0191 2 1019.51646 2037.01837 58212.36 0.39554 0.00040326 -0.3656 -0.00037274 0.029942 3.0526E-05 1020.01693893514 1024.5212788492 134.75 0.34271 134.75 134.56 134.9 0 61 11 11 0 0 0 4.4783E-88 2 87037 183.77 168.57 4 3.4821 2.3412 0 98572000 37061000 61511000 1562 1170 795 882 2497;2498 2497 2286 ELVSSSSSGSDSDSEVDK 18 1 0 Phospho (STY) _ELVSSSSSGS(ph)DSDSEVDK_ ELVS(0.001)S(0.001)S(0.005)S(0.02)S(0.088)GS(0.398)DS(0.398)DS(0.088)EVDK ELVS(-25.16)S(-25.16)S(-19.18)S(-12.97)S(-6.57)GS(0)DS(0)DS(-6.56)EVDK 0 0 1 0 D6RC37;D6R970;B7Z1Z0;Q6IBA2;Q59G24;P53999 D6RC37 D6RC37 SUB1;PC4 Activated RNA polymerase II transcriptional coactivator p15 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 951.8831 2 947.875505 1893.73646 64248.59 0.77946 0.00073883 -0.43838 -0.00041553 0.34108 0.0003233 947.875441128297 951.881944735315 46.043 1.1654 46.043 45.607 46.772 3.8147E-06 273 83 6 0 0 0 1.5746E-05 2 17342 53.448 41.834 8 0.79564 0.94347 0 7420000 4074700 3345300 1563 699 796 883 2499;2500 2500 1153;1154;1155 ELVSSSSSGSDSDSEVDK 18 1 0 Phospho (STY) _ELVSSSSSGSDS(ph)DSEVDK_ ELVSSSSS(0.004)GS(0.198)DS(0.501)DS(0.296)EVDK ELVS(-42.59)S(-33.52)S(-36.11)S(-32.05)S(-21.05)GS(-4.03)DS(2.29)DS(-2.29)EVDK 0 0 1 0 D6RC37;D6R970;B7Z1Z0;Q6IBA2;Q59G24;P53999 D6RC37 D6RC37 SUB1;PC4 Activated RNA polymerase II transcriptional coactivator p15 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 947.879 2 947.875505 1893.73646 NaN NaN NaN -1.6847 -0.0015968 NaN NaN NaN NaN 38.377 0.89926 38.377 37.781 38.681 0 0 0 0 3.4487E-11 1 21998 88.471 66.106 8 NaN NaN 0 21540000 21540000 0 1564 699 796 883 2501 2501 1153;1154;1155 ELVSSSSSGSDSDSEVDK 18 1 0 Unmodified _ELVSSSSSGSDSDSEVDK_ 0 0 0 0 D6RC37;D6R970;B7Z1Z0;Q6IBA2;Q59G24;P53999 D6RC37 D6RC37 SUB1;PC4 Activated RNA polymerase II transcriptional coactivator p15 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 907.8911 2 907.892339 1813.77013 NaN NaN NaN -0.44672 -0.00040558 NaN NaN NaN NaN 29.519 0.32287 29.519 29.327 29.65 0 0 0 0 0.021711 1 15111 32.068 20.202 1 NaN NaN 0 3961400 3961400 0 1565 699 796 884 2502 2502 ELVSSSSSGSDSDSEVDKK 19 2 0 Unmodified _ELVSSSSSGSDSDSEVDKK_ 0 0 0 1 D6RC37;D6R970;B7Z1Z0;Q6IBA2;Q59G24;P53999 D6RC37 D6RC37 SUB1;PC4 Activated RNA polymerase II transcriptional coactivator p15 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 648.2964 3 648.295639 1941.86509 74452.71 0.77912 0.0005051 0.22842 0.00014808 1.0075 0.00065318 648.630224868334 653.638470846887 21.259 0.36296 21.259 21.075 21.438 0 69 15 8 0 0 0 0.00013107 2 7985 40.968 30.023 1 0.5335 0.42307 0 11249000 6997000 4251600 1566 699 797 885 2503;2504 2503 ELVSSSSSGSDSDSEVDKK 19 2 0 Phospho (STY) _ELVSSSSSGSDS(ph)DSEVDKK_ ELVSSSS(0.001)S(0.009)GS(0.198)DS(0.592)DS(0.198)EVDKK ELVS(-42.73)S(-33.23)S(-32.33)S(-29.97)S(-18)GS(-4.75)DS(4.75)DS(-4.75)EVDKK 0 0 1 1 D6RC37;D6R970;B7Z1Z0;Q6IBA2;Q59G24;P53999 D6RC37 D6RC37 SUB1;PC4 Activated RNA polymerase II transcriptional coactivator p15 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1012.4261 2 1011.92299 2021.83142 59919.46 0.36447 0.00036882 0.49145 0.00049731 0.85593 0.00086613 1011.92347467328 1019.93740791765 25.911 0.41672 25.911 25.732 26.149 -1.9073E-06 154 24 8 0 0 0 1.1815E-13 1 11994 83.423 67.884 8 0.25655 0.19302 0 65147000 50814000 14333000 1567 699 797 886 2505 2505 1153;1154;1155 ELVSSSSSGSDSDSEVDKK 19 2 0 Phospho (STY) _ELVSSSSSGSDS(ph)DSEVDKK_ ELVSS(0.001)S(0.004)S(0.037)S(0.037)GS(0.119)DS(0.401)DS(0.401)EVDKK ELVS(-33.42)S(-25.7)S(-20.08)S(-10.38)S(-10.38)GS(-5.27)DS(0)DS(0)EVDKK 0 0 1 1 D6RC37;D6R970;B7Z1Z0;Q6IBA2;Q59G24;P53999 D6RC37 D6RC37 SUB1;PC4 Activated RNA polymerase II transcriptional coactivator p15 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 674.9523 3 674.951083 2021.83142 74867.94 1.0549 0.00071203 -0.75894 -0.00051225 0.29599 0.00019978 674.951112527427 680.292916536282 25.917 0.4732 25.917 25.732 26.205 0 144 27 8 0 0 0 7.0031E-06 1 12010 51.827 41.011 8 0.31245 0.24567 0 35109000 26922000 8187500 1568 699 797 886 2506 2506 1153;1154;1155 ELYVKLTPVSLSNSPIK 17 2 0 3 Phospho (STY) _ELYVKLT(ph)PVSLS(ph)NS(ph)PIK_ ELYVKLT(0.999)PVS(0.562)LS(0.761)NS(0.678)PIK ELY(-54.52)VKLT(25.96)PVS(-1.34)LS(2.64)NS(1.34)PIK 0 0 3 1 A4LAA3;P46100 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1064.9945 2 1064.49263 2126.97071 58759.23 0.53273 0.00056708 -0.11955 -0.00012726 0.41317 0.00043982 1064.99413025178 1073.00805243258 127.7 0.84979 127.7 127.29 128.14 0 480 76 9 0 0 0 2.8692E-07 2 77361 75.463 75.463 10 0.9034 1.1681 0 140620000 76744000 63881000 1569 422 798 887 2507;2508 2507 717;718;719;2722 EMEAELEDERK 11 1 1 Oxidation (M) _EM(ox)EAELEDERK_ EM(1)EAELEDERK EM(58.17)EAELEDERK 0 1 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 471.549 3 465.541651 1393.60312 87711.02 0.36365 0.00016929 -0.2223 -0.00010349 0.14135 6.5805E-05 465.541586450722 471.549078111559 60.444 0.46037 60.444 60.226 60.687 0 136 31 8 0 0 0 0.0020536 1 27385 58.172 58.172 1 2.1139 2.505 0 55479000 16147000 39333000 1570 49 799 888 2509 2509 9 EMEAELEDERK 11 1 1 Oxidation (M) _EM(ox)EAELEDERK_ EM(1)EAELEDERK EM(123.75)EAELEDERK 0 1 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 706.8204 2 697.808839 1393.60312 73065.22 1.0125 0.00070653 -0.3845 -0.0002683 0.628 0.00043822 697.808507630466 706.819992698093 60.425 0.3586 60.425 60.241 60.6 0 106 23 6 0 0 0 4.4044E-11 2 27439 123.75 123.75 1 1.7213 1.9954 0 28212000 9255000 18957000 1571 49 799 888 2510;2511 2510 9 EMEHNTVCAAGTSPVGEIGEEK 22 1 0 Oxidation (M),Phospho (STY) _EM(ox)EHNTVCAAGT(ph)SPVGEIGEEK_ EM(1)EHNTVCAAGTSPVGEIGEEK EMEHNT(0.008)VCAAGT(0.496)S(0.496)PVGEIGEEK EM(44.85)EHNTVCAAGTSPVGEIGEEK EMEHNT(-18.01)VCAAGT(0)S(0)PVGEIGEEK 0 1 1 0 H7C1M2;P18583 H7C1M2;P18583 P18583 SON Protein SON MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 814.6721 3 814.338067 2439.99237 68867.23 0.92003 0.00074922 -0.47186 -0.00038425 0.44817 0.00036496 814.337289765498 817.343399449393 75.577 0.48273 75.577 75.384 75.867 -7.6294E-06 114 39 4 0 0 0 9.4776E-07 1 38917 44.848 39.591 3 1.1957 1.4914 0 25876000 10524000 15353000 1572 882;971 800 889 2512 2512 240 1489;2836 EMFEDTVEER 10 0 1 Oxidation (M) _EM(ox)FEDTVEER_ EM(1)FEDTVEER EM(52.58)FEDTVEER 0 1 0 0 E9PC52;Q6FHQ0;Q16576;A8K6A2 E9PC52 E9PC52 RBBP7 Histone-binding protein RBBP7 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 650.7722 2 650.771725 1299.5289 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.57 1 63.57 63.07 64.07 3.8147E-06 0 0 0 0.0078014 1 29973 52.579 24.836 1 1573 798 801 890 2513 2513 217 EMGFTNMTEIQHK 13 1 0 2 Oxidation (M) _EM(ox)GFTNM(ox)TEIQHK_ EM(1)GFTNM(1)TEIQHK EM(53.75)GFTNM(53.75)TEIQHK 0 2 0 0 Q4ZG72;A0A024RAH8;Q9NVP1 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 536.5657 3 533.237686 1596.69123 84040.63 0.33418 0.0001782 -0.72117 -0.00038455 -0.38699 -0.00020636 533.237704439266 535.908818265808 66.317 0.80298 66.317 65.956 66.759 0 200 58 6 0 0 0 0.011015 1 32270 53.754 47.173 1 2.4028 3.0447 0 32870000 9835900 23035000 1574 182 802 891 2514 2514 42;43 EMISLLSPQK 10 1 0 Oxidation (M),Phospho (STY) _EM(ox)ISLLS(ph)PQK_ EM(1)ISLLSPQK EMIS(0.108)LLS(0.892)PQK EM(48.95)ISLLSPQK EMIS(-9.16)LLS(9.16)PQK 0 1 1 0 B3KMF4;S4R403;B3KSA6;Q9Y2D8 B3KMF4 B3KMF4 SSX2IP Afadin- and alpha-actinin-binding protein MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 625.3031 2 621.295997 1240.57744 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.009 1 93.009 92.509 93.509 0 0 0 0 0.0080868 1 51723 48.948 36.722 2 1575 573 803 892 2515 2515 147 952 EMLASDDEEDVSSK 14 1 0 Oxidation (M),Phospho (STY) _EM(ox)LAS(ph)DDEEDVSSK_ EM(1)LASDDEEDVSSK EMLAS(1)DDEEDVSSK EM(75.32)LASDDEEDVSSK EMLAS(40.2)DDEEDVS(-40.2)S(-45.38)K 0 1 1 0 Q5CZ93;Q86WF6;Q7Z4C7;E7ETM8;E7EUA0;B4DUN9;D3DQ79;Q0ZGT2 Q5CZ93 Q5CZ93 DKFZp686A0568;NEXN Nexilin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 829.8154 2 825.808048 1649.60154 68361.63 0.83871 0.00069261 -0.017952 -1.4825E-05 0.82076 0.00067779 825.807610417398 829.815225136575 45.488 1.0672 45.488 45.05 46.117 0 193 77 5 0 0 0 0.00013834 2 17030 75.316 49.205 3 3.3184 3.9336 0 5981800 1345200 4636600 1576 663 804 893 2516;2517 2516 167 1107 ENALTVVQKDSSELPTTK 18 2 0 Phospho (STY) _ENALTVVQKDS(ph)SELPTTK_ ENALT(0.01)VVQKDS(0.563)S(0.36)ELPT(0.034)T(0.034)K ENALT(-17.71)VVQKDS(1.94)S(-1.94)ELPT(-12.22)T(-12.22)K 0 0 1 1 A0A1B0GUH9 A0A1B0GUH9 A0A1B0GUH9 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 686.0115 3 680.66807 2038.98238 75172.5 0.86105 0.00058609 0.33866 0.00023051 1.1997 0.0008166 681.002586618085 686.011134908688 85.122 1.0584 85.122 84.851 85.909 0 372 99 8 0 0 0 0.00017487 1 54607 42.029 34.583 5 2.502 2.0384 0 24301000 7729000 16572000 1577 385 805 894 2518 2518 652 ENDTVTISPK 10 1 0 Phospho (STY) _ENDTVTIS(ph)PK_ ENDT(0.018)VT(0.016)IS(0.966)PK ENDT(-17.21)VT(-17.78)IS(17.21)PK 0 0 1 0 W5ZR30;Q9UGU0 W5ZR30 W5ZR30 TCF20 Transcription factor 20 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 592.2656 2 592.265751 1182.51695 79431.75 0.497 0.00029435 0.25081 0.00014855 0.74781 0.0004429 592.265698243743 596.272934229084 58.032 1.4294 58.032 57.273 58.703 0 397 115 4 0 0 0 8.8786E-05 1 25451 90.861 74.527 3 0.70118 0.88944 0 37031000 20326000 16704000 1578 1227 806 895 2519 2519 2492 ENDTVTISPK 10 1 0 Phospho (STY) _ENDTVTIS(ph)PK_ ENDT(0.003)VT(0.014)IS(0.983)PK ENDT(-24.99)VT(-18.51)IS(18.51)PK 0 0 1 0 W5ZR30;Q9UGU0 W5ZR30 W5ZR30 TCF20 Transcription factor 20 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 592.266 2 592.265751 1182.51695 79110.98 1.019 0.0006035 0.093374 5.5302E-05 1.1124 0.00065881 592.265778730951 596.272897101551 50.308 1.072 50.308 49.864 50.936 3.8147E-06 565 98 8 0 0 0 0.0014899 2 30239 77.185 60.408 3 1.7823 1.1833 0 81356000 28536000 52821000 1579 1227 806 895 2520;2521 2521 2492 ENEPQQMVSPSNSLR 15 0 1 Oxidation (M),Phospho (STY) _ENEPQQM(ox)VS(ph)PSNSLR_ ENEPQQM(1)VSPSNSLR ENEPQQMVS(0.745)PS(0.23)NS(0.025)LR ENEPQQM(40.19)VSPSNSLR ENEPQQMVS(5.1)PS(-5.1)NS(-14.73)LR 0 1 1 0 A0A0C4DGM5;A0A024R9R5;Q9H2Y7;H3BNX5;B4DGC7 A0A0C4DGM5 A0A0C4DGM5 ZNF106;ZFP106 Zinc finger protein 106 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 906.8857 2 906.385123 1810.75569 65040.73 0.60958 0.00055251 0.17974 0.00016292 0.78932 0.00071543 906.38548985696 911.389569748195 54.474 0.91921 54.474 53.999 54.919 0 294 70 6 0 0 0 0.0028355 1 22913 40.187 34.463 3 0.78578 0.93253 0 15163000 9289600 5873600 1580 172 807 896 2522 2522 39 269 ENFALECSPAFQVSDDEHEK 20 1 0 Phospho (STY) _ENFALECS(ph)PAFQVSDDEHEK_ ENFALECS(1)PAFQVSDDEHEK ENFALECS(35.4)PAFQVS(-35.4)DDEHEK 0 0 1 0 B7Z7S9;Q562F6 B7Z7S9 B7Z7S9 SGOL2 Shugoshin-like 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 814.0027 3 811.329788 2430.96754 67753.71 1.4977 0.0012152 -0.46902 -0.00038053 1.0287 0.00083464 811.663035900951 814.001096469848 102.28 0.69894 102.28 101.92 102.62 0 253 54 7 0 0 0 8.6684E-06 2 58721 50.883 46.762 2 1.0687 1.3206 0 23565000 12067000 11499000 1581 713 808 897 2523;2524 2523 1181;1182 ENFALECSPAFQVSDDEHEK 20 1 0 Phospho (STY) _ENFALECS(ph)PAFQVSDDEHEK_ ENFALECS(1)PAFQVSDDEHEK ENFALECS(43.95)PAFQVS(-43.95)DDEHEK 0 0 1 0 B7Z7S9;Q562F6 B7Z7S9 B7Z7S9 SGOL2 Shugoshin-like 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 814.0019 3 811.329788 2430.96754 67606.79 1.1065 0.00089776 -0.21522 -0.00017461 0.89132 0.00072315 811.663648776015 814.335402426296 102.72 1.4578 102.72 102.17 103.63 0 775 140 10 0 0 0 4.1085E-14 1 65945 85.855 77.465 2 2.6828 1.7589 0 51751000 16331000 35420000 1582 713 808 897 2525 2525 1181;1182 ENFALECSPAFQVSDDEHEK 20 1 0 2 Phospho (STY) _ENFALECS(ph)PAFQVS(ph)DDEHEK_ ENFALECS(1)PAFQVS(1)DDEHEK ENFALECS(49.62)PAFQVS(49.62)DDEHEK 0 0 2 0 B7Z7S9;Q562F6 B7Z7S9 B7Z7S9 SGOL2 Shugoshin-like 2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 837.9907 3 837.985232 2510.93387 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.22 1 103.22 102.72 103.72 -7.6294E-06 0 0 0 0.00030945 1 59592 49.618 44.038 1 1583 713 808 898 2526 2526 1181;1182 ENGFSSPPQIK 11 1 0 Phospho (STY) _ENGFSS(ph)PPQIK_ ENGFS(0.002)S(0.998)PPQIK ENGFS(-26.24)S(26.24)PPQIK 0 0 1 0 B9EG90;P11387;Q6PK95;Q6NWZ5 B9EG90 B9EG90 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 646.2944 2 642.287018 1282.55948 74881.54 0.98137 0.00063032 -0.189 -0.00012139 0.79236 0.00050893 642.286948310099 646.293945855575 75.927 2.0834 75.927 74.959 77.042 0 1129 180 8 0 0 0 5.1363E-11 5 39212 127.17 84.838 2 1.173 1.4488 0 579740000 263300000 316440000 1584 729 809 899 2527;2528;2529;2530;2531 2529 1201;1202 ENGFSSPPQIK 11 1 0 Phospho (STY) _ENGFSS(ph)PPQIK_ ENGFS(0.038)S(0.962)PPQIK ENGFS(-14.05)S(14.05)PPQIK 0 0 1 0 B9EG90;P11387;Q6PK95;Q6NWZ5 B9EG90 B9EG90 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 646.2945 2 642.287018 1282.55948 74500.16 1.1801 0.00075797 -0.78374 -0.00050339 0.39636 0.00025458 642.286569757691 646.293668656845 76.21 2.1716 76.21 75.108 77.28 0 1296 196 10 0 0 0 1.5979E-10 3 48585 123.2 89.314 2 1.8997 1.2703 0 128960000 45383000 83581000 1585 729 809 899 2532;2533;2534 2533 1201;1202 ENGFSSPPQIK 11 1 0 2 Phospho (STY) _ENGFS(ph)S(ph)PPQIK_ ENGFS(1)S(1)PPQIK ENGFS(42.81)S(42.81)PPQIK 0 0 2 0 B9EG90;P11387;Q6PK95;Q6NWZ5 B9EG90 B9EG90 TOP1 DNA topoisomerase 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 686.3242 2 682.270183 1362.52581 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.831 1 82.831 82.331 83.331 0 0 0 0 0.017354 1 44315 42.809 18.655 1 1586 729 809 900 2535 2535 1201;1202 ENGFSSPPQIKDEPEDDGYFVPPK 24 2 0 Phospho (STY) _ENGFS(ph)SPPQIKDEPEDDGYFVPPK_ ENGFS(0.5)S(0.5)PPQIKDEPEDDGYFVPPK ENGFS(0)S(0)PPQIKDEPEDDGY(-78.25)FVPPK 0 0 1 1 B9EG90;P11387;Q6PK95;Q6NWZ5 B9EG90 B9EG90 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 925.0759 3 924.740734 2771.20037 61952.01 0.82161 0.00075978 -0.10363 -9.5829E-05 0.71798 0.00066395 925.075152564169 930.417560077553 108.05 1.3932 108.05 107.35 108.75 7.6294E-06 1001 106 12 0 0 0 2.384E-25 4 62891 92.822 92.822 3 1.1954 1.6214 0 771190000 358890000 412300000 1587 729 810 901 2536;2537;2538;2539 2537 1201;1202 ENPEDVLSPTSVATYLSSK 19 1 0 Phospho (STY) _ENPEDVLS(ph)PTSVATYLSSK_ ENPEDVLS(0.985)PT(0.012)S(0.003)VATYLSSK ENPEDVLS(19.28)PT(-19.28)S(-25.23)VAT(-42.09)Y(-50.69)LS(-57.96)S(-57.96)K 0 0 1 0 Q6MZT4;Q7Z3M0;A0A0A0MRG9;Q5CZA0;B7ZLE9;A6H8X1;B9EG74;Q66GT8;B3KVI2;A0A0C4ZLW1;Q96SN8;Q5JTU8;B1AMJ5 Q6MZT4 Q6MZT4 DKFZp686E2242;DKFZp686M1993;CDK5RAP2;DKFZp686D1070 CDK5 regulatory subunit-associated protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1058.99 2 1058.98793 2115.96131 60483.32 0.29243 0.00030968 0.46757 0.00049515 0.76 0.00080483 1058.98841037834 1063.49654331756 131.51 0.50931 131.51 131.28 131.79 0 203 43 7 0 0 0 3.646E-18 1 79972 100.02 90.179 7 0.60819 0.72292 0 11568000 6911500 4656300 1588 286 811 902 2540 2540 446 ENSFGSPLEFR 11 0 1 Phospho (STY) _ENSFGS(ph)PLEFR_ ENSFGS(1)PLEFR ENS(-36.55)FGS(36.55)PLEFR 0 0 1 0 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 686.7947 2 681.789924 1361.5653 74637.8 0.67356 0.00045923 0.23544 0.00016052 0.909 0.00061975 681.789741256076 686.794217349281 107.09 0.79961 107.09 106.78 107.57 0 187 67 5 0 0 0 0.00071695 1 62290 82.543 64.231 2 1.3046 1.5768 0 19267000 9654600 9612900 1589 383 812 903 2541 2541 606 ENSYPWPYGR 10 0 1 Phospho (STY) _ENSY(ph)PWPYGR_ ENS(0.01)Y(0.988)PWPY(0.001)GR ENS(-19.78)Y(19.78)PWPY(-28.58)GR 0 0 1 0 J3KTD6;Q96GD4;J3KRF8;B2RC06 J3KTD6 J3KTD6 AURKB Aurora kinase B ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 679.7768 2 674.771535 1347.52852 NaN NaN NaN 0.0073917 4.9877E-06 NaN NaN NaN NaN 82.01 0.53284 82.01 81.719 82.251 0 0 0 0 0.0079673 1 52504 46.891 34.665 3 NaN NaN 0 4670700 0 4670700 1590 893 813 904 2542 2542 3020 ENVEYIEREESDGEYDEFGR 20 0 2 Phospho (STY) _ENVEYIEREES(ph)DGEYDEFGR_ ENVEY(0.001)IEREES(0.999)DGEYDEFGR ENVEY(-29.63)IEREES(29.63)DGEY(-34.4)DEFGR 0 0 1 1 O95218 O95218 O95218 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 856.015 3 849.006139 2543.99659 68145.08 0.92276 0.00078343 0.85917 0.00072944 1.7819 0.0015129 849.340484340198 855.679061179872 94.163 0.27376 94.163 94.075 94.349 -7.6294E-06 57 24 5 0 0 0 7.0584E-08 3 52656 60.991 54.486 3 1.1362 1.3797 0 18422000 7843000 10579000 1591 942 814 905 2543;2544;2545 2544 1611 EPGPIAPSTNSSPVLK 16 1 0 Phospho (STY) _EPGPIAPS(ph)TNSSPVLK_ EPGPIAPS(0.316)T(0.228)NS(0.228)S(0.228)PVLK EPGPIAPS(1.42)T(-1.42)NS(-1.42)S(-1.42)PVLK 0 0 1 0 Q14674 Q14674 Q14674 ESPL1 Separin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 841.4185 2 837.410935 1672.80732 67843.9 0.70682 0.0005919 0.056549 4.7354E-05 0.76337 0.00063925 837.410892257013 841.417810788946 87.87 0.80089 87.87 87.466 88.267 0 288 72 5 0 0 0 0.00076786 2 47673 42.958 42.958 4 0.62246 0.78622 0 46613000 26305000 20308000 1592 1058 815 906 2546;2547 2547 1975 EPGPIAPSTNSSPVLK 16 1 0 Phospho (STY) _EPGPIAPS(ph)TNSSPVLK_ EPGPIAPS(0.316)T(0.228)NS(0.228)S(0.228)PVLK EPGPIAPS(1.43)T(-1.43)NS(-1.43)S(-1.43)PVLK 0 0 1 0 Q14674 Q14674 Q14674 ESPL1 Separin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 837.4119 2 837.410935 1672.80732 68395.34 1.0895 0.00091236 -0.25279 -0.00021169 0.83671 0.00070067 837.410999778361 841.417068266487 91.59 1.1051 91.59 91.015 92.12 0 513 107 8 0 0 0 0.00028739 1 58965 48.351 40.623 4 1.2251 0.79959 0 44892000 21955000 22937000 1593 1058 815 906 2548 2548 1975 EPHSPADQPEQQAESTLTSAETR 23 0 1 Phospho (STY) _EPHS(ph)PADQPEQQAESTLTSAETR_ EPHS(0.995)PADQPEQQAES(0.003)T(0.003)LTSAETR EPHS(25.44)PADQPEQQAES(-25.98)T(-25.44)LT(-40.52)S(-44.27)AET(-47.23)R 0 0 1 0 A0A0C4DGM5;A0A024R9R5;Q9H2Y7;Q86T35;H3BS99 A0A0C4DGM5 A0A0C4DGM5 ZNF106;ZFP106;DKFZp451A177 Zinc finger protein 106 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 867.38 3 863.708204 2588.10278 NaN NaN NaN -0.34348 -0.00029667 NaN NaN NaN NaN 81.865 0.367 81.865 81.624 81.991 0 0 0 0 1.0052E-06 2 43601 51.645 44.312 6 NaN NaN 0 14703000 0 14703000 1594 172 816 907 2549;2550 2549 270 EPINSTTPFNSSK 13 1 0 Phospho (STY) _EPINSTTPFNSS(ph)K_ EPINSTTPFNS(0.285)S(0.715)K EPINS(-48.32)T(-51.14)T(-40.34)PFNS(-4)S(4)K 0 0 1 0 Q8WYP5;B3KVE5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 751.3326 2 751.332153 1500.64975 NaN NaN NaN -1.0972 -0.00082435 NaN NaN NaN NaN 72.569 1.4283 72.569 71.999 73.427 -7.6294E-06 0 0 0 1.3765E-33 1 36651 131.03 110.17 5 NaN NaN 0 19133000 19133000 0 1595 1170 817 908 2551 2551 2287 EPLATLVDQSPESLK 15 1 0 Phospho (STY) _EPLATLVDQS(ph)PESLK_ EPLAT(0.005)LVDQS(0.824)PES(0.17)LK EPLAT(-21.78)LVDQS(6.85)PES(-6.85)LK 0 0 1 0 E7EWD6;B8XCX8;Q76L83 E7EWD6 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 857.9241 2 853.91605 1705.81755 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.32 1 109.32 108.82 109.82 0 0 0 0 0.00030379 1 64267 53.169 31.797 3 1596 726 818 909 2552 2552 1199 EPPEDEEEEDGREK 14 1 1 Unmodified _EPPEDEEEEDGREK_ 0 0 0 1 B3KRQ2;Q86XI2;B4DHE5;B4DXB7;Q9NXD3;H0Y6U5 B3KRQ2 B3KRQ2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 563.2363 3 563.235832 1686.68567 81335.75 0.81018 0.00045632 0.082228 4.6314E-05 0.89241 0.00050264 563.570626549508 569.243344583211 48.22 0.86441 48.22 47.872 48.737 -3.8147E-06 246 57 6 0 0 0 0.011837 1 18811 40.983 20.602 1 0.80096 0.86216 0 5857300 2518600 3338700 1597 593 819 910 2553 2553 EPSEVPTPK 9 1 0 Unmodified _EPSEVPTPK_ 0 0 0 0 P17096;B4DWA0;A0A024RCT9;Q5T6U8;Q6IPL9 P17096;Q5T6U8 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 492.2562 2 492.25584 982.497126 88357.68 0.20258 9.972E-05 0.27336 0.00013457 0.47594 0.00023429 492.255953147997 496.262928684346 55.138 1.3226 55.138 54.329 55.652 0 440 103 6 0 0 0 0.00024376 1 23620 93.162 78.38 1 0.8044 1.0078 0 27143000 16655000 10488000 1598 968;1105 820 911 2554 2554 EPSSPPPAPTSSTFGLQDGNLR 22 0 1 Phospho (STY) _EPS(ph)SPPPAPTSSTFGLQDGNLR_ EPS(0.496)S(0.496)PPPAPT(0.004)S(0.001)S(0.001)T(0.001)FGLQDGNLR EPS(0)S(0)PPPAPT(-21.08)S(-26.69)S(-26.69)T(-26.69)FGLQDGNLR 0 0 1 0 J3QTB2;J3QTA6;Q9BRQ6 J3QTB2 J3QTB2 CHCHD6 MICOS complex subunit MIC25 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1168.535 2 1168.03374 2334.05292 57672.13 0.36047 0.00042104 0.48327 0.00056448 0.84374 0.00098552 1168.03408152849 1173.53973513043 103.74 0.87483 103.74 103.21 104.08 0 194 64 7 0 0 0 7.662E-06 1 59949 44.089 44.089 6 1.2858 1.5816 0 25456000 15739000 9716900 1599 899 821 912 2555 2555 1525;1526 EQDQRPLHPVANPHAEISTK 20 1 1 Unmodified _EQDQRPLHPVANPHAEISTK_ 0 0 0 1 Q9NX58 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 572.0497 4 567.543637 2266.14544 78975.83 1.2168 0.0006906 -0.4215 -0.00023922 0.79533 0.00045138 567.543336910389 572.299647469661 101.08 2.5428 101.08 100.82 103.36 7.6294E-06 990 196 9 0 0 0 1.3782E-22 7 59674 102.98 93.17 1 0.90062 1.0803 0 141710000 72944000 68767000 1600 1222 822 913 2556;2557;2558;2559;2560;2561;2562 2562 EQDQRPLHPVANPHAEISTK 20 1 1 Unmodified _EQDQRPLHPVANPHAEISTK_ 0 0 0 1 Q9NX58 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 572.2998 4 567.543637 2266.14544 78859.99 0.6352 0.00036051 -0.24355 -0.00013823 0.39165 0.00022228 567.543691265708 572.299815446104 103.82 1.3135 103.82 103.16 104.47 0 456 97 8 0 0 0 6.9179E-09 2 60264 67.866 52.444 1 0.8578 1.0153 0 50797000 31649000 19149000 1601 1222 822 913 2563;2564 2564 EQELHNLLEVVSQCCEASSSDITEK 25 1 0 Unmodified _EQELHNLLEVVSQCCEASSSDITEK_ 0 0 0 0 Q59GZ5;B2RAM6;P52732 Q59GZ5 Q59GZ5 KIF11 Kinesin-like protein;Kinesin-like protein KIF11 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 972.1186 3 969.111182 2904.31172 NaN NaN NaN -0.33073 -0.00032052 NaN NaN NaN NaN 133.33 0.095322 133.33 133.26 133.35 0 0 0 0 0.00032062 1 81118 46.403 32.961 1 NaN NaN 0 4975700 0 4975700 1602 548 823 914 2565 2565 EQGLTLPLYQSPVK 14 1 0 Phospho (STY) _EQGLTLPLYQS(ph)PVK_ EQGLT(0.052)LPLY(0.045)QS(0.903)PVK EQGLT(-12.42)LPLY(-13.02)QS(12.42)PVK 0 0 1 0 A1YBP1;P51587 A1YBP1 A1YBP1 BRCA2 Breast cancer type 2 susceptibility protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 830.926 2 826.918396 1651.82224 69056.59 1.0224 0.00084546 0.19425 0.00016063 1.2167 0.0010061 826.918362439805 830.92571485377 125.63 0.48225 125.63 125.32 125.81 -7.6294E-06 175 45 6 0 0 0 0.0032129 1 81153 44.252 35.063 3 2.0108 1.622 0 6316300 2146900 4169500 1603 403 824 915 2566 2566 691 EQIVPKPEEEVAQK 14 2 0 Unmodified _EQIVPKPEEEVAQK_ 0 0 0 1 A0A087WXM6;J3QQT2;J3QLC8;J3KRX5;A0A024R261;A0A0A0MRF8;A0A0A6YYL6;P18621 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 547.6352 3 541.957794 1622.85155 82165.17 0.59644 0.00032325 -0.10218 -5.5379E-05 0.49426 0.00026787 541.957721572086 547.300437131506 79.9 1.6084 79.9 79.041 80.649 0 701 147 7 0 0 0 0.00041601 3 42410 73.834 64.552 1 0.66443 0.85013 0 96854000 55110000 41743000 1604 60 825 916 2567;2568;2569 2569 EQIVPKPEEEVAQK 14 2 0 Unmodified _EQIVPKPEEEVAQK_ 0 0 0 1 A0A087WXM6;J3QQT2;J3QLC8;J3KRX5;A0A024R261;A0A0A0MRF8;A0A0A6YYL6;P18621 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 821.0659 2 812.433052 1622.85155 70564.13 0.88964 0.00072277 -0.11071 -8.9944E-05 0.77893 0.00063283 812.432973304584 820.447113690671 79.942 0.35185 79.942 79.825 80.177 0 72 30 4 0 0 0 0.032354 1 42299 27.914 18.725 1 0.52687 0.58457 0 15396000 6845900 8550100 1605 60 825 916 2570 2570 EQIVPKPEEEVAQK 14 2 0 Unmodified _EQIVPKPEEEVAQK_ 0 0 0 1 A0A087WXM6;J3QQT2;J3QLC8;J3KRX5;A0A024R261;A0A0A0MRF8;A0A0A6YYL6;P18621 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 812.4335 2 812.433052 1622.85155 70864.71 0.86768 0.00070493 0.14861 0.00012074 1.0163 0.00082567 812.934415114426 820.447360005982 79.736 0.23418 79.736 79.614 79.849 0 56 21 5 0 0 0 0.023156 1 42060 31.185 18.094 1 0.71819 0.82803 0 20322000 10802000 9520400 1606 60 825 916 2571 2571 EQIVPKPEEEVAQK 14 2 0 Unmodified _EQIVPKPEEEVAQK_ 0 0 0 1 A0A087WXM6;J3QQT2;J3QLC8;J3KRX5;A0A024R261;A0A0A0MRF8;A0A0A6YYL6;P18621 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 541.9587 3 541.957794 1622.85155 NaN NaN NaN -0.28741 -0.00015576 NaN NaN NaN NaN 54.558 1.9406 54.558 53.339 55.28 3.8147E-06 0 0 0 0.026738 1 33464 38.995 26.369 1 NaN NaN 0 5929900 5929900 0 1607 60 825 916 2572 2572 EQIVPKPEEEVAQK 14 2 0 Unmodified _EQIVPKPEEEVAQK_ 0 0 0 1 A0A087WXM6;J3QQT2;J3QLC8;J3KRX5;A0A024R261;A0A0A0MRF8;A0A0A6YYL6;P18621 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 547.3013 3 541.957794 1622.85155 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.532 1 54.532 54.032 55.032 0 0 0 0 0.017054 1 33282 33.796 26.666 1 1608 60 825 916 2573 2573 EQIVPKPEEEVAQKK 15 3 0 Unmodified _EQIVPKPEEEVAQKK_ 0 0 0 2 A0A087WXM6;J3QQT2;J3QLC8;J3KRX5;A0A024R261;A0A0A0MRF8;A0A0A6YYL6;P18621 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 585.3246 3 584.656115 1750.94651 79792.63 0.36269 0.00021205 -0.2107 -0.00012319 0.15199 8.8861E-05 584.655880024954 592.670250579142 91.98 1.0144 91.98 91.599 92.614 0 429 89 8 0 0 0 0.0002019 4 50716 67.416 60.846 1 0.76883 0.97374 0 113290000 61419000 51874000 1609 60 826 917 2574;2575;2576;2577 2576 EQLTPSQIMSLEK 13 1 0 Oxidation (M),Phospho (STY) _EQLTPS(ph)QIM(ox)SLEK_ EQLTPSQIM(1)SLEK EQLT(0.058)PS(0.927)QIMS(0.015)LEK EQLTPSQIM(112.02)SLEK EQLT(-12.03)PS(12.03)QIMS(-18)LEK 0 1 1 0 H7BYN3;Q6LES8;E5KSX8;E5KSU5;Q00059 H7BYN3 H7BYN3 TFAM Transcription factor A, mitochondrial MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 800.3731 2 800.370421 1598.72629 67525.14 1.4059 0.0011253 0.42518 0.0003403 1.8311 0.0014656 800.370533428288 804.880804752042 96.786 1.071 96.786 96.331 97.402 0 227 88 6 0 0 0 3.2137E-14 1 54531 112.02 64.833 3 0.22966 0.28813 0 27769000 22578000 5191000 1610 784 827 918 2578 2578 211 1326 EQLTPSQIMSLEK 13 1 0 Oxidation (M),Phospho (STY) _EQLTPS(ph)QIM(ox)SLEK_ EQLTPSQIM(1)SLEK EQLT(0.005)PS(0.956)QIMS(0.04)LEK EQLTPSQIM(89.47)SLEK EQLT(-23.18)PS(13.8)QIMS(-13.8)LEK 0 1 1 0 H7BYN3;Q6LES8;E5KSX8;E5KSU5;Q00059 H7BYN3 H7BYN3 TFAM Transcription factor A, mitochondrial ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 800.3725 2 800.370421 1598.72629 NaN NaN NaN 0.47425 0.00037957 NaN NaN NaN NaN 103.21 1.28 103.21 102.43 103.71 0 0 0 0 1.8166E-06 1 66388 89.466 43.677 3 NaN NaN 0 21950000 21950000 0 1611 784 827 918 2579 2579 211 1326 EQMIDLQNLLTTQSPSVK 18 1 0 Oxidation (M),Phospho (STY) _EQM(ox)IDLQNLLTTQS(ph)PSVK_ EQM(1)IDLQNLLTTQSPSVK EQMIDLQNLLTT(0.003)QS(0.862)PS(0.135)VK EQM(141.22)IDLQNLLTTQSPSVK EQMIDLQNLLT(-39.55)T(-23.96)QS(8.06)PS(-8.06)VK 0 1 1 0 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1071.5159 2 1071.01343 2140.0123 58747.62 0.26513 0.00028396 0.17108 0.00018323 0.43621 0.00046719 1071.51522968695 1075.52224214893 121.94 0.96338 121.94 121.5 122.46 7.6294E-06 557 71 11 0 0 0 2.3843E-44 2 73507 141.22 121.38 4 0.78111 0.9674 0 163670000 94173000 69498000 1612 1199 828 919 2580;2581 2581 335 2382 EQQLLSTLK 9 1 0 Phospho (STY) _EQQLLST(ph)LK_ EQQLLS(0.325)T(0.675)LK EQQLLS(-3.18)T(3.18)LK 0 0 1 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 570.2908 2 570.289029 1138.56351 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.091 1 97.091 96.591 97.591 0 0 0 0 0.0058318 1 54884 76.843 50.738 2 1613 944 829 920 2582 2582 1629;2858 EQQLLSTLK 9 1 0 Phospho (STY) _EQQLLST(ph)LK_ EQQLLS(0.396)T(0.604)LK EQQLLS(-1.83)T(1.83)LK 0 0 1 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 574.7987 2 570.289029 1138.56351 NaN NaN NaN 0.018106 1.0326E-05 NaN NaN NaN NaN 99.464 0.32716 99.464 99.188 99.516 0 0 0 0 0.022474 1 63945 55.401 32.759 2 NaN NaN 0 3208700 0 3208700 1614 944 829 920 2583 2583 1629;2858 EQQLLSTLK 9 1 0 Phospho (STY) _EQQLLS(ph)TLK_ EQQLLS(0.776)T(0.224)LK EQQLLS(5.41)T(-5.41)LK 0 0 1 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 574.2958 2 570.289029 1138.56351 NaN NaN NaN -0.085087 -4.8524E-05 NaN NaN NaN NaN 99.88 0.86162 99.88 99.455 100.32 -7.6294E-06 0 0 0 0.0074927 1 64396 61.213 39.467 2 NaN NaN 0 4589800 0 4589800 1615 944 829 920 2584 2584 1629;2858 EQREEEVEEEEKEEDEEK 18 2 1 Unmodified _EQREEEVEEEEKEEDEEK_ 0 0 0 2 B2R6A9;Q9BW71 B2R6A9 B2R6A9 HIRIP3 HIRA-interacting protein 3 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 774.662 3 774.662828 2320.96665 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.658 1 70.658 70.158 71.158 0 0 0 0 0.0010292 1 35357 54.964 41.132 1 1616 532 830 921 2585 2585 EQREEEVEEEEKEEDEEK 18 2 1 Unmodified _EQREEEVEEEEKEEDEEK_ 0 0 0 2 B2R6A9;Q9BW71 B2R6A9 B2R6A9 HIRIP3 HIRA-interacting protein 3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 783.3408 3 774.662828 2320.96665 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.705 1 70.705 70.205 71.205 0 0 0 0 0.02851 1 35391 31.883 21.743 1 1617 532 830 921 2586 2586 EQYSDAPEEIR 11 0 1 Phospho (STY) _EQYS(ph)DAPEEIR_ EQY(0.174)S(0.826)DAPEEIR EQY(-6.76)S(6.76)DAPEEIR 0 0 1 0 Q8NEJ9;H0YJ17 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 713.7911 2 708.787579 1415.5606 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.624 1 62.624 62.124 63.124 0 0 0 0 0.018022 1 29293 40.725 26.038 2 1618 1161 831 922 2587 2587 2239 EREDSGDAEAHAFK 14 1 1 Phospho (STY) _EREDS(ph)GDAEAHAFK_ EREDS(1)GDAEAHAFK EREDS(62.3)GDAEAHAFK 0 0 1 1 A0A024R6Q8;Q9NPI1 A0A024R6Q8 A0A024R6Q8 BRD7 Bromodomain-containing protein 7 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 553.8975 3 547.889541 1640.64679 80707.48 0.53057 0.00029069 0.030336 1.6621E-05 0.5609 0.00030731 547.889565109827 553.896968162232 20.571 0.32372 20.571 20.405 20.729 0 87 14 9 0 0 0 0.00096768 1 7410 62.304 54.394 1 1.6293 1.2472 0 15775000 5462000 10313000 1619 126 832 923 2588 2588 189 EREQQIEEHR 10 0 2 Unmodified _EREQQIEEHR_ 0 0 0 1 B3KSQ7;Q16643;D6R9W4 B3KSQ7 B3KSQ7 DBN1 Drebrin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 452.2219 3 451.888373 1352.64329 89597.55 0.19566 8.8415E-05 -0.13496 -6.0985E-05 0.0607 2.743E-05 452.222623253959 458.560462440217 67.702 0.65038 67.702 67.353 68.003 0 221 54 6 0 0 0 0.029612 1 33158 48.981 37.25 1 0.78144 0.96595 0 31808000 19459000 12349000 1620 598 833 924 2589 2589 ERFAGVDIR 9 0 2 Unmodified _ERFAGVDIR_ 0 0 0 1 M0R210;P62249;M0QX76;M0R1M5;M0R3H0;A0A087WZ27;B4DP32;Q6IPX4 M0R210 M0R210 RPS16;ZNF90 40S ribosomal protein S16 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 541.7968 2 531.788173 1061.56179 83530.59 0.62299 0.0003313 -0.30058 -0.00015985 0.32241 0.00017146 531.787984420806 541.796315363994 107.43 0.67177 107.43 107.02 107.69 0 121 52 4 0 0 0 0.013492 1 62784 65.305 23.196 1 1.1279 1.3701 0 18543000 10630000 7913600 1621 914 834 925 2590 2590 ERLEQQVPVNQVFGQDEMIDVIGVTK 26 1 1 Oxidation (M) _ERLEQQVPVNQVFGQDEM(ox)IDVIGVTK_ ERLEQQVPVNQVFGQDEM(1)IDVIGVTK ERLEQQVPVNQVFGQDEM(118.14)IDVIGVTK 0 1 0 1 B3KS36;P39023;Q8TBW1;Q96QL0;H7C3M2;H7C422;Q9NY85;G5E9G0;Q49AJ9;B5MCW2;Q9BT63 B3KS36 B3KS36 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 996.8448 3 996.509605 2986.50699 60102.54 0.73447 0.00073191 -0.80399 -0.00080119 -0.069519 -6.9276E-05 996.843466556511 1002.85074875219 133.41 0.23082 133.41 133.31 133.54 0 91 11 12 0 0 0 1.0528E-45 2 81198 118.14 106.06 1 1.1591 1.4005 0 247720000 114700000 133020000 1622 597 835 926 2591;2592 2592 151 ERLYPLR 7 0 2 Unmodified _ERLYPLR_ 0 0 0 1 P42766 P42766 P42766 RPL35 60S ribosomal protein L35 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 473.7773 2 473.777077 945.5396 NaN NaN NaN -0.20687 -9.8013E-05 NaN NaN NaN NaN 105.6 1.3518 105.6 104.81 106.16 7.6294E-06 0 0 0 0.020952 1 61118 75.972 34.851 1 NaN NaN 0 12652000 12652000 0 1623 992 836 927 2593 2593 ERLYPLRK 8 1 2 Unmodified _ERLYPLRK_ 0 0 0 2 P42766 P42766 P42766 RPL35 60S ribosomal protein L35 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 358.8853 3 358.885464 1073.63456 NaN NaN NaN NaN NaN NaN NaN NaN NaN 122.86 1 122.86 122.36 123.36 0 0 0 0 0.031467 1 74335 42.287 27.349 1 1624 992 837 928 2594 2594 ERNGLSLAALK 11 1 1 Unmodified _ERNGLSLAALK_ 0 0 0 1 P16401 P16401 P16401 HIST1H1B Histone H1.5 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 586.3441 2 586.343312 1170.67207 NaN NaN NaN NaN NaN NaN NaN NaN NaN 114.88 1 114.88 114.38 115.38 7.6294E-06 0 0 0 0.0017209 1 68466 83.869 41.76 1 1625 966 838 929 2595 2595 ERNLQDPVPKESPK 14 2 1 Phospho (STY) _ERNLQDPVPKES(ph)PK_ ERNLQDPVPKES(1)PK ERNLQDPVPKES(40.61)PK 0 0 1 2 A0A087X0P0;Q02224 A0A087X0P0 A0A087X0P0 CENPE Kinesin-like protein;Centromere-associated protein E MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 581.6279 3 572.948731 1715.82436 80177.22 0.58526 0.00033532 0.11998 6.8744E-05 0.70524 0.00040407 573.282966508015 581.627694411556 30.66 1.2776 30.66 29.968 31.246 0 352 92 6 0 0 0 0.0017272 1 15845 40.614 40.614 1 1.3642 1.1402 0 21483000 9744500 11739000 1626 269 839 930 2596 2596 428 ERPEGETGDLGK 12 1 1 Unmodified _ERPEGETGDLGK_ 0 0 0 1 Q12873;B4DLC6;B3KWV4;B4DKV1;Q2TAZ1 Q12873 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 644.3116 2 644.312406 1286.61026 84365.64 0.83346 0.00053701 -1.0068 -0.00064871 -0.17337 -0.0001117 644.311951924011 653.321944381991 65.083 0.21996 65.083 64.984 65.204 0 26 15 4 0 0 0 0.020434 1 31216 54.259 29.484 1 0.34009 0.37387 0 11809000 7331400 4477500 1627 1045 840 931 2597 2597 ERPPEEVAAR 10 0 2 Unmodified _ERPPEEVAAR_ 0 0 0 1 B4DS66;B4DKR1;Q16891;Q05DN3;C9J406;B9A067;B4DQY2;Q3B7X4;A0A087WYS0;B4E2B5 B4DS66 B4DS66 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 391.8758 3 385.203522 1152.58874 96257.01 -0.34418 -0.00013258 0.76232 0.00029365 0.41814 0.00016107 385.20342278616 392.210801482759 66.523 0.29075 66.523 66.367 66.657 0 65 18 5 0 0 0 8.9014E-06 2 32348 89.827 81.901 1 1.4262 1.7624 0 31472000 14044000 17429000 1628 630 841 932 2598;2599 2598 ERPPEEVAAR 10 0 2 Unmodified _ERPPEEVAAR_ 0 0 0 1 B4DS66;B4DKR1;Q16891;Q05DN3;C9J406;B9A067;B4DQY2;Q3B7X4;A0A087WYS0;B4E2B5 B4DS66 B4DS66 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 577.3016 2 577.301644 1152.58874 81347.02 0.43567 0.00025152 0.028322 1.635E-05 0.464 0.00026787 577.301629317099 587.309676055033 66.504 0.30151 66.504 66.356 66.657 0 79 19 6 0 0 0 0.0079767 1 32405 79.974 49.72 1 1.0032 1.2453 0 50979000 25871000 25108000 1629 630 841 932 2600 2600 ERPSGPESPVQGPR 14 0 2 Phospho (STY) _ERPSGPES(ph)PVQGPR_ ERPS(0.025)GPES(0.975)PVQGPR ERPS(-15.9)GPES(15.9)PVQGPR 0 0 1 1 Q9UMN6 Q9UMN6 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 524.9107 3 524.910388 1571.70933 82508 0.49934 0.00026211 -0.075787 -3.9781E-05 0.42355 0.00022233 524.91042015407 531.582580707962 24.61 0.68238 24.61 24.259 24.941 0 198 34 10 0 0 0 0.0017876 1 10844 42.044 36.867 2 1.4929 1.2982 0 87971000 36839000 51132000 1630 1240 842 933 2601 2601 2541 ERPTTQTVIK 10 1 1 Unmodified _ERPTTQTVIK_ 0 0 0 1 REV__H0Y8H0 REV__H0Y8H0 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 586.8353 2 586.83532 1171.65609 78896.95 0.77953 0.00045746 -0.034154 -2.0043E-05 0.74538 0.00043741 586.835117972429 595.846526572637 113.4 3.4473 113.4 111.96 115.41 0 1224 310 5 0 0 0 0.0026072 3 66938 80.438 24.908 1 0.57178 0.6872 0 164560000 98278000 66280000 + 1631 1262 843 934 2602;2603;2604 2602 ERPTTQTVIK 10 1 1 Unmodified _ERPTTQTVIK_ 0 0 0 1 REV__H0Y8H0 REV__H0Y8H0 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 586.8353 2 586.83532 1171.65609 78896.95 0.77953 0.00045746 -0.034154 -2.0043E-05 0.74538 0.00043741 586.835117972429 595.846526572637 113.4 3.4473 113.4 111.96 115.41 0 1224 310 5 0 0 0 0.00031493 1 66938 80.438 24.908 1 0.57178 0.6872 0 164560000 98278000 66280000 + 1632 1262 843 934 2605 2605 ERPVQSLKTSR 11 1 2 Phospho (STY) _ERPVQSLKT(ph)SR_ ERPVQS(0.003)LKT(0.499)S(0.499)R ERPVQS(-22.61)LKT(0)S(0)R 0 0 1 2 F8WF16;B7Z615;B7Z8L1;F8W6A0;B7Z8M9;F8W0Q9;B7Z695;Q8NEY8 F8WF16 F8WF16 PPHLN1 Periphilin-1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 460.9042 3 460.904686 1379.69223 86864.74 0.3176 0.00014638 -0.36869 -0.00016993 -0.05109 -2.3547E-05 460.904514121862 470.248071049093 18.329 0.31918 18.329 18.156 18.475 1.9073E-06 71 14 7 0 0 0 0.0030076 2 5414 48.899 44.719 3 0.6136 0.58092 0 22642000 14454000 8187900 1633 710 844 935 2606;2607 2607 1179;2802 ERSGVSLAALK 11 1 1 Phospho (STY) _ERS(ph)GVSLAALK_ ERS(0.803)GVS(0.197)LAALK ERS(6.1)GVS(-6.1)LAALK 0 0 1 1 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 614.8249 2 605.813203 1209.61185 NaN NaN NaN -0.00080845 -4.8977E-07 NaN NaN NaN NaN 86.865 1.2808 86.865 85.752 87.033 0 0 0 0 6.971E-05 1 46568 86.114 29.067 2 NaN NaN 0 48729000 0 48729000 1634 410;967 845 936 2608 2608 704 ERSGVSLAALK 11 1 1 Phospho (STY) _ERS(ph)GVSLAALK_ ERS(1)GVSLAALK ERS(47.65)GVS(-47.65)LAALK 0 0 1 1 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 614.8249 2 605.813203 1209.61185 NaN NaN NaN 0.21031 0.00012741 NaN NaN NaN NaN 87.26 0.3965 87.26 86.984 87.381 0 0 0 0 1.8199E-85 1 47417 163.4 103.14 2 NaN NaN 0 47956000 0 47956000 1635 410;967 845 936 2609 2609 704 ERSGVSLAALK 11 1 1 Phospho (STY) _ERS(ph)GVSLAALK_ ERS(0.906)GVS(0.094)LAALK ERS(9.82)GVS(-9.82)LAALK 0 0 1 1 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 614.8245 2 605.813203 1209.61185 NaN NaN NaN 0.21212 0.0001285 NaN NaN NaN NaN 87.692 1.7434 87.692 87.381 89.124 -7.6294E-06 0 0 0 0.016409 1 48265 60.301 6.7341 2 NaN NaN 0 62158000 0 62158000 1636 410;967 845 936 2610 2610 704 ERSGVSLAALK 11 1 1 Phospho (STY) _ERS(ph)GVSLAALK_ ERS(0.808)GVS(0.192)LAALK ERS(6.24)GVS(-6.24)LAALK 0 0 1 1 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 605.8133 2 605.813203 1209.61185 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.901 1 85.901 85.401 86.401 0 0 0 0 0.0020359 1 46467 60.019 10.922 2 1637 410;967 845 936 2611 2611 704 ERSGVSLAALK 11 1 1 Phospho (STY) _ERS(ph)GVSLAALK_ ERS(1)GVSLAALK ERS(48.37)GVS(-48.37)LAALK 0 0 1 1 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 605.8132 2 605.813203 1209.61185 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.656 1 86.656 86.156 87.156 0 0 0 0 2.1309E-19 1 46991 142.77 71.738 2 1638 410;967 845 936 2612 2612 704 ERSGVSLAALK 11 1 1 Phospho (STY) _ERS(ph)GVSLAALK_ ERS(0.999)GVS(0.001)LAALK ERS(28.95)GVS(-28.95)LAALK 0 0 1 1 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 605.8138 2 605.813203 1209.61185 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.41 1 87.41 86.91 87.91 -7.6294E-06 0 0 0 8.4507E-06 1 47531 119.39 44.442 2 1639 410;967 845 936 2613 2613 704 ERSGVSLAALK 11 1 1 Phospho (STY) _ERS(ph)GVSLAALK_ ERS(1)GVSLAALK ERS(52.56)GVS(-52.56)LAALK 0 0 1 1 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 605.814 2 605.813203 1209.61185 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.178 1 88.178 87.678 88.678 0 0 0 0 4.5417E-38 1 48088 162.52 77.452 2 1640 410;967 845 936 2614 2614 704 ERSGVSLAALK 11 1 1 Phospho (STY) _ERS(ph)GVSLAALK_ ERS(0.991)GVS(0.009)LAALK ERS(20.57)GVS(-20.57)LAALK 0 0 1 1 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 605.8138 2 605.813203 1209.61185 77331.56 0.91951 0.00055705 -0.34295 -0.00020776 0.57656 0.00034929 605.8132268799 614.823798751237 71.893 2.4347 71.893 71.193 73.627 0 926 225 9 0 0 0 4.2073E-09 2 45265 115.12 47.236 2 0.53844 0.41619 0 212240000 134280000 77958000 1641 410;967 845 936 2615;2616 2615 704 ERSGVSLAALKK 12 2 1 Phospho (STY) _ERS(ph)GVSLAALKK_ ERS(0.996)GVS(0.004)LAALKK ERS(23.7)GVS(-23.7)LAALKK 0 0 1 2 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 455.5887 3 446.909548 1337.70682 89376.13 0.4526 0.00020227 0.0005797 2.5907E-07 0.45318 0.00020253 446.909489454993 455.588438056257 52.258 1.6435 52.258 51.77 53.414 0 423 146 4 0 0 0 0.0030375 1 31944 48.892 45.669 2 0.56307 0.47495 0 12869000 8350300 4519100 1642 410;967 846 937 2617 2617 704 ERTNEGVIEFR 11 0 2 Unmodified _ERTNEGVIEFR_ 0 0 0 1 V9HVZ0;A8K588;Q13247;Q59GY3 V9HVZ0 V9HVZ0 HEL-S-91;SRSF6 Serine/arginine-rich splicing factor 6 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 457.2375 3 450.565119 1348.67353 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.71 1 103.71 103.21 104.21 0 0 0 0 0.018942 1 59940 35.774 14.143 1 1643 474 847 938 2618 2618 ERVEAGDVIYIEANSGAVK 19 1 1 Unmodified _ERVEAGDVIYIEANSGAVK_ 0 0 0 1 B5BUB1;Q9Y265;H7C4I3;E7ETR0;B3KRS7 B5BUB1 B5BUB1 RUVBL1 RuvB-like 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 680.0237 3 674.016371 2019.02728 78282.94 0.47008 0.00031684 0.13158 8.8687E-05 0.60166 0.00040553 674.016294242657 680.358207648209 133.17 0.23117 133.17 133.05 133.28 0 70 18 6 0 0 0 0.012875 2 80996 29.766 25.149 1 1.0239 1.0998 0 5356100 2644700 2711400 1644 692 848 939 2619;2620 2619 ERVEAVNMAEGIIHDTETK 19 1 1 Oxidation (M) _ERVEAVNM(ox)AEGIIHDTETK_ ERVEAVNM(1)AEGIIHDTETK ERVEAVNM(73.11)AEGIIHDTETK 0 1 0 1 A1XP52;B7Z4T3;B7Z4V2;V9HW84;Q8N1C8;P38646 A1XP52 A1XP52 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 726.0277 3 720.019675 2157.0372 NaN NaN NaN 0.21839 0.00015725 NaN NaN NaN NaN 121.18 0.67958 121.18 120.81 121.49 0 0 0 0 5.5121E-11 1 73030 73.11 59.698 1 NaN NaN 0 8083000 0 8083000 1645 402 849 940 2621 2621 102 ERVEAVNMAEGIIHDTETK 19 1 1 Oxidation (M) _ERVEAVNM(ox)AEGIIHDTETK_ ERVEAVNM(1)AEGIIHDTETK ERVEAVNM(84.97)AEGIIHDTETK 0 1 0 1 A1XP52;B7Z4T3;B7Z4V2;V9HW84;Q8N1C8;P38646 A1XP52 A1XP52 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 726.027 3 720.019675 2157.0372 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.88 1 121.88 121.38 122.38 -7.6294E-06 0 0 0 4.7947E-10 1 73636 84.975 71.937 1 1646 402 849 940 2622 2622 102 ERVMEIVDADEK 12 1 1 Oxidation (M) _ERVM(ox)EIVDADEK_ ERVM(1)EIVDADEK ERVM(63.62)EIVDADEK 0 1 0 1 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 734.3586 2 725.348131 1448.68171 NaN NaN NaN 0.13894 0.00010078 NaN NaN NaN NaN 81.053 0.79459 81.053 80.695 81.49 0 0 0 0 0.0011491 2 42857 63.624 29.664 1 NaN NaN 0 12691000 0 12691000 1647 1254 850 941 2623;2624 2623 363 ESAGADTRPTVRPR 14 0 3 Unmodified _ESAGADTRPTVRPR_ 0 0 0 2 G3V194;E9PS48;Q53FM7;O75489 G3V194 G3V194 NDUFS3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 505.2681 3 504.934094 1511.78045 85623.71 0.33682 0.00017007 -0.17318 -8.7444E-05 0.16364 8.2627E-05 505.268346587508 514.942244445424 72.469 0.3181 72.469 72.31 72.628 0 71 23 4 0 0 0 0.0031808 1 36681 35.037 35.037 1 0.93144 1.083 0 45125000 19369000 25756000 1648 817 851 942 2625 2625 ESASPTIPNLDLLEAHTK 18 1 0 Phospho (STY) _ESAS(ph)PTIPNLDLLEAHTK_ ES(0.183)AS(0.409)PT(0.409)IPNLDLLEAHTK ES(-3.49)AS(0)PT(0)IPNLDLLEAHT(-39.22)K 0 0 1 0 O75151 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 672.9966 3 672.661027 2014.96125 73832.63 1.0722 0.00072124 -0.019266 -1.296E-05 1.053 0.00070828 672.995397948353 675.332374008597 123.19 0.82929 123.19 122.76 123.59 0 423 76 7 0 0 0 0.00021848 1 79588 41.76 28.831 4 1.6497 1.0934 0 73384000 30490000 42893000 1649 934 852 943 2626 2626 1596;1597;2850 ESAWSPPPIEIR 12 0 1 Phospho (STY) _ESAWS(ph)PPPIEIR_ ESAWS(1)PPPIEIR ES(-55.39)AWS(55.39)PPPIEIR 0 0 1 0 Q8WYP5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 731.3433 2 731.342324 1460.6701 71541.1 1.0654 0.00077914 -0.0045045 -3.2943E-06 1.0608 0.00077584 731.342550046589 736.346255340679 116.99 0.90106 116.99 116.61 117.52 -7.6294E-06 478 80 8 0 0 0 1.2824E-14 2 69928 118.87 97.47 2 0.9708 1.2261 0 114500000 57283000 57220000 1650 1170 853 944 2627;2628 2628 2288 ESAWSPPPIEIR 12 0 1 Phospho (STY) _ESAWS(ph)PPPIEIR_ ES(0.001)AWS(0.999)PPPIEIR ES(-32.1)AWS(32.1)PPPIEIR 0 0 1 0 Q8WYP5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 731.3432 2 731.342324 1460.6701 70766.47 1.0729 0.00078467 0.23259 0.0001701 1.3055 0.00095477 731.342611181938 736.346716620994 124.36 0.89281 124.36 123.93 124.83 -7.6294E-06 515 83 9 0 0 0 0.0071555 2 80323 60.157 54.122 2 1.8391 1.232 0 118480000 42715000 75761000 1651 1170 853 944 2629;2630 2629 2288 ESDGFREEK 9 1 1 Unmodified _ESDGFREEK_ 0 0 0 1 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 548.7487 2 548.74891 1095.48327 81827.38 0.54112 0.00029694 0.23326 0.000128 0.77438 0.00042494 548.748787782726 557.760278172977 62.465 0.34063 62.465 62.317 62.658 -3.8147E-06 93 27 5 0 0 0 4.1088E-06 1 29159 126.24 82.435 1 1.0858 1.2246 0 19721000 9430500 10291000 1652 809 854 945 2631 2631 ESDQTLAALLSPK 13 1 0 Phospho (STY) _ESDQTLAALLS(ph)PK_ ESDQTLAALLS(1)PK ES(-81.08)DQT(-39.51)LAALLS(39.51)PK 0 0 1 0 H7C1M2;P18583 H7C1M2;P18583 P18583 SON Protein SON MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 730.8604 2 726.852722 1451.69089 70903.56 0.90626 0.00065872 -0.028821 -2.0949E-05 0.87744 0.00063777 726.852760205806 730.859700359849 119.01 1.1535 119.01 118.47 119.62 -7.6294E-06 684 102 10 0 0 0 3.7676E-17 4 71692 128.06 107.76 3 1.0942 1.3541 0 230470000 109850000 120620000 1653 882;971 855 946 2632;2633;2634;2635 2634 1490 ESDQTLAALLSPK 13 1 0 Phospho (STY) _ESDQTLAALLS(ph)PK_ ESDQT(0.001)LAALLS(0.999)PK ES(-77.18)DQT(-28.76)LAALLS(28.76)PK 0 0 1 0 H7C1M2;P18583 H7C1M2;P18583 P18583 SON Protein SON MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 726.8536 2 726.852722 1451.69089 71565.28 1.0063 0.00073147 0.17721 0.00012881 1.1836 0.00086027 726.852801352247 730.859851737143 126.44 1.3317 126.44 125.75 127.08 -7.6294E-06 733 121 9 0 0 0 1.06E-25 3 81862 140.84 113.51 3 1.6907 1.1243 0 90129000 33540000 56589000 1654 882;971 855 946 2636;2637;2638 2637 1490 ESEDDLNKESEEEVGPTK 18 2 0 Phospho (STY) _ESEDDLNKES(ph)EEEVGPTK_ ES(0.003)EDDLNKES(0.997)EEEVGPT(0.001)K ES(-25.87)EDDLNKES(25.87)EEEVGPT(-30.61)K 0 0 1 1 O43719;B4DRS4 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1066.4507 2 1057.93609 2113.85763 60161.5 0.27246 0.00028825 0.02602 2.7528E-05 0.29848 0.00031577 1057.9354816813 1065.95101432136 55.302 0.63075 55.302 54.897 55.527 0 230 49 6 0 0 0 5.3901E-05 1 23521 50.653 50.653 3 0.89665 1.0151 0 17813000 9228500 8584300 1655 927 856 947 2639 2639 1560 ESEDKPEIEDVGSDEEEEK 19 2 0 Phospho (STY) _ESEDKPEIEDVGS(ph)DEEEEK_ ESEDKPEIEDVGS(1)DEEEEK ES(-69.43)EDKPEIEDVGS(69.43)DEEEEK 0 0 1 1 Q2VPJ6;K9JA46;P07900;Q8TBA7;Q86U12;O75322 Q2VPJ6 Q2VPJ6 HSP90AA1;EL52 Heat shock protein HSP 90-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1136.9479 2 1136.94686 2271.87916 57222.56 0.21348 0.00024272 0.10274 0.00011681 0.31622 0.00035953 1137.4482697273 1144.96105655838 65.171 0.7323 65.171 64.882 65.614 0 363 53 10 0 0 0 2.241E-17 2 31144 94.281 77.719 2 0.94857 1.2302 0 156450000 78626000 77822000 1656 906 857 948 2640;2641 2641 1532 ESEDKPEIEDVGSDEEEEK 19 2 0 Phospho (STY) _ESEDKPEIEDVGS(ph)DEEEEK_ ESEDKPEIEDVGS(1)DEEEEK ES(-85.22)EDKPEIEDVGS(85.22)DEEEEK 0 0 1 1 Q2VPJ6;K9JA46;P07900;Q8TBA7;Q86U12;O75322 Q2VPJ6 Q2VPJ6 HSP90AA1;EL52 Heat shock protein HSP 90-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 763.6436 3 758.300329 2271.87916 69332.54 0.78202 0.00059301 1.1087 0.0008407 1.8907 0.0014337 758.302279604365 763.97734173966 65.151 0.65297 65.151 64.924 65.577 0 275 47 8 0 0 0 5.8524E-47 1 31386 132.24 132.24 2 0.62297 0.79744 0 98421000 60475000 37947000 1657 906 857 948 2642 2642 1532 ESEDKPEIEDVGSDEEEEK 19 2 0 Phospho (STY) _ESEDKPEIEDVGS(ph)DEEEEK_ ESEDKPEIEDVGS(1)DEEEEK ES(-38.07)EDKPEIEDVGS(38.07)DEEEEK 0 0 1 1 Q2VPJ6;K9JA46;P07900;Q8TBA7;Q86U12;O75322 Q2VPJ6 Q2VPJ6 HSP90AA1;EL52 Heat shock protein HSP 90-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1137.4493 2 1136.94686 2271.87916 57241.18 0.72532 0.00082465 0.042102 4.7868E-05 0.76742 0.00087252 1137.44820950666 1145.46263987635 52.427 1.2635 52.427 51.77 53.034 0 810 115 10 0 0 0 6.3685E-07 2 31936 57.798 46.759 2 0.63949 0.48064 0 70368000 41508000 28860000 1658 906 857 948 2643;2644 2644 1532 ESEDKPEIEDVGSDEEEEK 19 2 0 Unmodified _ESEDKPEIEDVGSDEEEEK_ 0 0 0 1 Q2VPJ6;K9JA46;P07900;Q8TBA7;Q86U12;O75322 Q2VPJ6 Q2VPJ6 HSP90AA1;EL52 Heat shock protein HSP 90-alpha ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 736.9883 3 731.644885 2191.91283 NaN NaN NaN -0.69016 -0.00050495 NaN NaN NaN NaN 72.273 0.5744 72.273 71.921 72.495 0 0 0 0 2.8037E-08 1 36341 59.585 49.86 1 NaN NaN 0 24017000 0 24017000 1659 906 857 949 2645 2645 ESEDKPEIEDVGSDEEEEKK 20 3 0 Phospho (STY) _ESEDKPEIEDVGS(ph)DEEEEKK_ ESEDKPEIEDVGS(1)DEEEEKK ES(-56.76)EDKPEIEDVGS(56.76)DEEEEKK 0 0 1 2 Q2VPJ6;K9JA46;P07900;Q8TBA7;Q86U12;O75322 Q2VPJ6 Q2VPJ6 HSP90AA1;EL52 Heat shock protein HSP 90-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 801.334 3 800.99865 2399.97412 67638.61 0.82013 0.00065692 0.21493 0.00017216 1.0351 0.00082908 801.333639168916 809.012955374797 67.597 0.77402 67.597 67.364 68.138 0 251 64 6 0 0 0 1.3101E-10 3 33428 74.63 74.627 2 1.1288 1.4297 0 58256000 30799000 27457000 1660 906 858 950 2646;2647;2648 2648 1532 ESEDKPEIEDVGSDEEEEKK 20 3 0 Phospho (STY) _ESEDKPEIEDVGS(ph)DEEEEKK_ ES(0.001)EDKPEIEDVGS(0.999)DEEEEKK ES(-32.66)EDKPEIEDVGS(32.66)DEEEEKK 0 0 1 2 Q2VPJ6;K9JA46;P07900;Q8TBA7;Q86U12;O75322 Q2VPJ6 Q2VPJ6 HSP90AA1;EL52 Heat shock protein HSP 90-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 809.0132 3 800.99865 2399.97412 66817.34 0.60914 0.00048792 0.31583 0.00025298 0.92496 0.0007409 801.332781893516 809.347548376541 68.249 0.29082 68.249 68.127 68.418 0 63 24 4 0 0 0 7.6808E-05 1 33785 40.177 40.177 2 0.71464 0.90511 0 23928000 14097000 9830800 1661 906 858 950 2649 2649 1532 ESEDKPEIEDVGSDEEEEKK 20 3 0 Phospho (STY) _ESEDKPEIEDVGS(ph)DEEEEKK_ ESEDKPEIEDVGS(1)DEEEEKK ES(-38.22)EDKPEIEDVGS(38.22)DEEEEKK 0 0 1 2 Q2VPJ6;K9JA46;P07900;Q8TBA7;Q86U12;O75322 Q2VPJ6 Q2VPJ6 HSP90AA1;EL52 Heat shock protein HSP 90-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 809.3478 3 800.99865 2399.97412 67585.79 1.0892 0.00087245 0.2015 0.0001614 1.2907 0.0010339 801.332942166103 809.012930017406 38.853 2.07 38.853 37.899 39.969 3.8147E-06 1129 184 8 0 0 0 7.8891E-07 1 22593 53.551 50.015 2 0.75897 0.67546 0 47016000 28441000 18574000 1662 906 858 950 2650 2650 1532 ESEDKPEIEDVGSDEEEEKK 20 3 0 Unmodified _ESEDKPEIEDVGSDEEEEKK_ 0 0 0 2 Q2VPJ6;K9JA46;P07900;Q8TBA7;Q86U12;O75322 Q2VPJ6 Q2VPJ6 HSP90AA1;EL52 Heat shock protein HSP 90-alpha ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 782.3579 3 774.343206 2320.00779 NaN NaN NaN -0.043676 -3.382E-05 NaN NaN NaN NaN 78.405 0.94767 78.405 77.889 78.837 0 0 0 0 1.7449E-09 2 41306 64.2 46.623 1 NaN NaN 0 25532000 0 25532000 1663 906 858 951 2651;2652 2652 ESEDKPEIEDVGSDEEEEKK 20 3 0 Unmodified _ESEDKPEIEDVGSDEEEEKK_ 0 0 0 2 Q2VPJ6;K9JA46;P07900;Q8TBA7;Q86U12;O75322 Q2VPJ6 Q2VPJ6 HSP90AA1;EL52 Heat shock protein HSP 90-alpha ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 587.0188 4 581.009224 2320.00779 NaN NaN NaN -0.22109 -0.00012845 NaN NaN NaN NaN 78.394 0.74649 78.394 77.971 78.717 0 0 0 0 0.0025653 1 41316 31.625 22.21 1 NaN NaN 0 32474000 0 32474000 1664 906 858 951 2653 2653 ESEDSDEENDFTEK 14 1 0 Phospho (STY) _ESEDS(ph)DEENDFTEK_ ESEDS(1)DEENDFTEK ES(-47.74)EDS(47.74)DEENDFT(-84.71)EK 0 0 1 0 A8K330;Q8IWA0;Q05D27 A8K330 A8K330 WDR75 WD repeat-containing protein 75 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 881.3098 2 877.301641 1752.58873 NaN NaN NaN 0.1246 0.00010931 NaN NaN NaN NaN 47.515 1.3656 47.515 46.701 48.066 0 0 0 0 3.9255E-76 1 18297 155.39 133.92 3 NaN NaN 0 21026000 0 21026000 1665 452 859 952 2654 2654 785 ESEDSDEENDFTEK 14 1 0 Phospho (STY) _ESEDS(ph)DEENDFTEK_ ES(0.481)EDS(0.519)DEENDFTEK ES(-0.33)EDS(0.33)DEENDFT(-33.22)EK 0 0 1 0 A8K330;Q8IWA0;Q05D27 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 877.3028 2 877.301641 1752.58873 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.016 1 47.016 46.516 47.516 0 0 0 0 0.0016536 1 18060 46.318 35.566 3 1666 452 859 952 2655 2655 785 ESEDSDEENDFTEK 14 1 0 Phospho (STY) _ESEDS(ph)DEENDFTEK_ ES(0.004)EDS(0.996)DEENDFTEK ES(-24.06)EDS(24.06)DEENDFT(-67.95)EK 0 0 1 0 A8K330;Q8IWA0;Q05D27 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 877.3032 2 877.301641 1752.58873 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.781 1 47.781 47.281 48.281 0 0 0 0 5.0268E-15 1 18572 130.24 109.93 3 1667 452 859 952 2656 2656 785 ESEEGNPVRGSEEDSPKK 18 2 1 Phospho (STY) _ESEEGNPVRGSEEDS(ph)PKK_ ESEEGNPVRGS(0.237)EEDS(0.763)PKK ES(-33.35)EEGNPVRGS(-5.08)EEDS(5.08)PKK 0 0 1 2 O43719;B4DRS4 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 694.3091 3 685.295184 2052.86372 74052.53 0.46309 0.00031735 0.46008 0.00031529 0.92316 0.00063264 685.630080163528 693.974286899349 51.752 0.96234 51.752 51.324 52.286 0 360 76 7 0 0 0 0.00018824 1 21165 40.622 30.865 3 1.717 2.0065 0 21877000 7747800 14129000 1668 927 860 953 2657 2657 1561 ESEEGNPVRGSEEDSPKK 18 2 1 Phospho (STY) _ESEEGNPVRGSEEDS(ph)PKK_ ESEEGNPVRGS(0.344)EEDS(0.656)PKK ES(-126.87)EEGNPVRGS(-2.81)EEDS(2.81)PKK 0 0 1 2 O43719;B4DRS4 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 685.296 3 685.295184 2052.86372 72290.58 0.90942 0.00062322 0.047064 3.2253E-05 0.95648 0.00065547 685.29557774298 693.97409483718 16.603 0.73255 16.603 16.392 17.124 0 196 26 13 0 0 0 2.3317E-63 2 3881 164.27 149.67 3 0.8529 0.68592 0 249430000 142610000 106810000 1669 927 860 953 2658;2659 2659 1561 ESEFDDEPK 9 1 0 Unmodified _ESEFDDEPK_ 0 0 0 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 552.2346 2 548.227476 1094.4404 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.471 1 53.471 52.971 53.971 3.8147E-06 0 0 0 0.018562 1 22367 48.283 30.248 1 1670 1248 861 954 2660 2660 ESEITDEDIDGILER 15 0 1 Unmodified _ESEITDEDIDGILER_ 0 0 0 0 B7ZAX9;B4DZC0;O60264 B7ZAX9 B7ZAX9 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 872.4103 2 867.407428 1732.8003 NaN NaN NaN 0.15253 0.00013231 NaN NaN NaN NaN 111.18 0.4505 111.18 110.97 111.42 0 0 0 0 7.1665E-18 1 65675 106.01 83.09 1 NaN NaN 0 6738800 0 6738800 1671 672 862 955 2661 2661 ESEITDEDIDGILER 15 0 1 Unmodified _ESEITDEDIDGILER_ 0 0 0 0 B7ZAX9;B4DZC0;O60264 B7ZAX9 B7ZAX9 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 872.4125 2 867.407428 1732.8003 NaN NaN NaN 0.016994 1.4741E-05 NaN NaN NaN NaN 114.58 0.58577 114.58 114.35 114.93 -7.6294E-06 0 0 0 8.7667E-12 1 73775 97.911 78.15 1 NaN NaN 0 5737000 0 5737000 1672 672 862 955 2662 2662 ESEQESEEEILAQK 14 1 0 Phospho (STY) _ESEQES(ph)EEEILAQK_ ESEQES(1)EEEILAQK ES(-83.5)EQES(83.5)EEEILAQK 0 0 1 0 B2R6A9;Q9BW71 B2R6A9 B2R6A9 HIRIP3 HIRA-interacting protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 864.8649 2 864.864212 1727.71387 66835.5 0.50103 0.00043332 0.16712 0.00014453 0.66815 0.00057786 864.864372366919 868.871252608356 69.024 1.2342 69.024 68.249 69.483 0 513 120 7 0 0 0 1.2802E-120 3 34471 205.96 190.7 2 0.36595 0.46014 0 53126000 37027000 16099000 1673 532 863 956 2663;2664;2665 2665 892;893 ESEQESEEEILAQK 14 1 0 Phospho (STY) _ES(ph)EQESEEEILAQK_ ES(0.849)EQES(0.151)EEEILAQK ES(7.5)EQES(-7.5)EEEILAQK 0 0 1 0 B2R6A9;Q9BW71 B2R6A9 B2R6A9 HIRIP3 HIRA-interacting protein 3 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 864.8654 2 864.864212 1727.71387 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.944 1 67.944 67.444 68.444 -7.6294E-06 0 0 0 6.1006E-06 1 42605 115.24 97.804 2 1674 532 863 956 2666 2666 892;893 ESEQESEEEILAQKK 15 2 0 Phospho (STY) _ESEQES(ph)EEEILAQKK_ ES(0.01)EQES(0.99)EEEILAQKK ES(-19.8)EQES(19.8)EEEILAQKK 0 0 1 1 B2R6A9;Q9BW71 B2R6A9 B2R6A9 HIRIP3 HIRA-interacting protein 3 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 619.6107 3 619.610221 1855.80883 NaN NaN NaN 0.61364 0.00038022 NaN NaN NaN NaN 64.687 0.42674 64.687 64.443 64.87 0 0 0 0 5.0137E-05 1 30796 60.317 51.493 2 NaN NaN 0 11399000 11399000 0 1675 532 864 957 2667 2667 892;893 ESESEDSSDDEPLIK 15 1 0 Phospho (STY) _ESESEDSS(ph)DDEPLIK_ ESESEDS(0.021)S(0.979)DDEPLIK ES(-139.24)ES(-97.18)EDS(-16.79)S(16.79)DDEPLIK 0 0 1 0 B4DFG0;P35659;H0Y993;B4DNW3 B4DFG0 B4DFG0 DEK Protein DEK MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 880.3439 2 880.343309 1758.67207 65694.36 0.49333 0.0004343 0.12316 0.00010842 0.61648 0.00054272 880.343469523272 884.350316247548 69.374 1.4893 69.374 68.642 70.131 0 784 144 7 0 0 0 9.9124E-161 5 34576 229.97 128.09 4 1.433 1.7788 0 106140000 46925000 59212000 1676 619 865 958 2668;2669;2670;2671;2672 2669 1021;1022;1023;1024 ESESEDSSDDEPLIK 15 1 0 Phospho (STY) _ESESEDS(ph)SDDEPLIK_ ES(0.002)ES(0.001)EDS(0.499)S(0.499)DDEPLIK ES(-24.52)ES(-26.68)EDS(0)S(0)DDEPLIK 0 0 1 0 B4DFG0;P35659;H0Y993;B4DNW3 B4DFG0 B4DFG0 DEK Protein DEK ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 880.8434 2 880.343309 1758.67207 NaN NaN NaN -0.16588 -0.00014603 NaN NaN NaN NaN 68.676 0.058189 68.676 68.651 68.709 0 0 0 0 0.0039652 1 34080 43.594 24.279 4 NaN NaN 0 4573700 4573700 0 1677 619 865 958 2673 2673 1021;1022;1023;1024 ESESEDSSDDEPLIK 15 1 0 Phospho (STY) _ESESEDSS(ph)DDEPLIK_ ESESEDS(0.048)S(0.952)DDEPLIK ES(-60.13)ES(-33.86)EDS(-13.02)S(13.02)DDEPLIK 0 0 1 0 B4DFG0;P35659;H0Y993;B4DNW3 B4DFG0 B4DFG0 DEK Protein DEK MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 884.3517 2 880.343309 1758.67207 63973.75 1.0703 0.00094227 -0.20469 -0.00018019 0.86566 0.00076208 880.342881198671 884.350094447731 66.485 2.4238 66.485 65.286 67.71 0 1200 219 8 0 0 0 1.0392E-12 6 41530 107.74 75.111 4 1.2443 0.82639 0 83373000 38488000 44885000 1678 619 865 958 2674;2675;2676;2677;2678;2679 2676 1021;1022;1023;1024 ESESEDSSDDEPLIK 15 1 0 2 Phospho (STY) _ESESEDS(ph)S(ph)DDEPLIK_ ESES(0.051)EDS(0.953)S(0.997)DDEPLIK ES(-44.65)ES(-13.01)EDS(13.01)S(24.66)DDEPLIK 0 0 2 0 B4DFG0;P35659;H0Y993;B4DNW3 B4DFG0 B4DFG0 DEK Protein DEK MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 924.3343 2 920.326474 1838.6384 63276.37 0.48602 0.0004473 0.34486 0.00031739 0.83089 0.00076469 920.326836206918 924.333671353535 76.607 1.6402 76.607 75.822 77.462 0 988 145 9 0 0 0 4.549E-18 2 39560 112.94 77.046 6 0.81249 1.005 0 295460000 157410000 138050000 1679 619 865 959 2680;2681 2681 1021;1022;1023;1024 ESESEDSSDDEPLIK 15 1 0 3 Phospho (STY) _ES(ph)ESEDS(ph)S(ph)DDEPLIK_ ES(0.806)ES(0.474)EDS(0.871)S(0.849)DDEPLIK ES(4.32)ES(-4.32)EDS(6.1)S(5.42)DDEPLIK 0 0 3 0 B4DFG0;P35659;H0Y993;B4DNW3 B4DFG0 B4DFG0 DEK Protein DEK MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 960.3099 2 960.309639 1918.60473 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.908 1 86.908 86.408 87.408 0 0 0 0 0.00040523 1 47170 47.037 29.022 4 1680 619 865 960 2682 2682 1021;1022;1023;1024 ESESEDSSDDEPLIKK 16 2 0 2 Phospho (STY) _ESES(ph)EDS(ph)SDDEPLIKK_ ES(0.126)ES(0.674)EDS(0.637)S(0.564)DDEPLIKK ES(-7.46)ES(2.55)EDS(0.82)S(-0.82)DDEPLIKK 0 0 2 1 B4DFG0;P35659;H0Y993;B4DNW3 B4DFG0 B4DFG0 DEK Protein DEK MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 984.3752 2 984.373956 1966.73336 62375.28 0.60958 0.00060006 -0.04852 -4.7762E-05 0.56106 0.0005523 984.374194063684 992.387893111049 55.786 1.6186 55.786 54.944 56.563 -3.8147E-06 734 138 7 0 0 0 0.00030282 1 34317 41.838 32.884 6 0.87333 0.67118 0 45129000 23292000 21837000 1681 619 866 961 2683 2683 1021;1022;1023;1024 ESESESDETPPAAPQLIK 18 1 0 Phospho (STY) _ESES(ph)ESDETPPAAPQLIK_ ES(0.091)ES(0.799)ES(0.11)DETPPAAPQLIK ES(-9.44)ES(8.6)ES(-8.6)DET(-39.05)PPAAPQLIK 0 0 1 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1008.4525 2 1004.44336 2006.87216 59965.65 0.66853 0.0006715 0.245 0.00024609 0.91352 0.00091758 1004.44342202692 1008.45075132287 92.742 1.4208 92.742 91.807 93.228 7.6294E-06 524 125 6 0 0 0 7.4497E-09 1 51726 81.619 70.713 4 1.033 1.2842 0 87350000 46286000 41064000 1682 931 867 962 2684 2684 1582;1583;1584;2848 ESESESDETPPAAPQLIK 18 1 0 Phospho (STY) _ES(ph)ESESDETPPAAPQLIK_ ES(0.951)ES(0.038)ES(0.01)DETPPAAPQLIK ES(14)ES(-14)ES(-19.62)DET(-35.93)PPAAPQLIK 0 0 1 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1008.489 2 1004.44336 2006.87216 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.736 1 93.736 93.236 94.236 0 0 0 0 0.001178 1 52317 51.771 37.08 4 1683 931 867 962 2685 2685 1582;1583;1584;2848 ESESESDETPPAAPQLIK 18 1 0 2 Phospho (STY) _ES(ph)ESES(ph)DETPPAAPQLIK_ ES(0.758)ES(0.276)ES(0.933)DET(0.034)PPAAPQLIK ES(4.77)ES(-4.77)ES(13.16)DET(-14.51)PPAAPQLIK 0 0 2 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1044.9286 2 1044.42652 2086.83849 59685.27 1.3663 0.001427 -0.32569 -0.00034015 1.0406 0.0010869 1044.92776774072 1048.43354572421 101.01 0.92593 101.01 100.56 101.49 0 459 72 8 0 0 0 3.6749E-06 2 57767 62.055 54.19 6 1.1063 1.3829 0 65206000 30248000 34958000 1684 931 867 963 2686;2687 2687 1582;1583;1584;2848 ESFDGSVR 8 0 1 Unmodified _ESFDGSVR_ 0 0 0 0 B3KM80;Q6ZS99;A0A024R4A0;P19338;H7BY16;Q9BQ02;B3KTP9 B3KM80 B3KM80 NCL Nucleolin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 453.7133 2 448.709057 895.40356 93968.89 0.25198 0.00011307 0.56663 0.00025425 0.81861 0.00036732 448.709035525039 453.71351862051 56.343 1.1168 56.343 55.588 56.705 -3.8147E-06 162 92 4 0 0 0 0.022576 1 24458 70.525 33.431 1 1.3445 1.4733 0 6778000 2843200 3934800 1685 87 868 964 2688 2688 ESGRPIKPPR 10 1 2 Unmodified _ESGRPIKPPR_ 0 0 0 2 X5CF57;A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;A0A140T9V2;H0YDJ7;U3KPW0;E9PIQ3;U3KQA6;A0A0G2JHL0;A0A140T9F7 X5CF57 X5CF57 BRD2 Bromodomain-containing protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 379.5561 3 379.556007 1135.64619 98407.28 0.10214 3.8767E-05 0.19505 7.4034E-05 0.29719 0.0001128 379.55593271545 388.899606774635 80.855 0.87152 80.855 80.454 81.325 0 227 78 5 0 0 0 0.007478 1 43102 41.54 41.54 1 0.59664 0.68299 0 32365000 20123000 12242000 1686 214 869 965 2689 2689 ESGSTLDLSGSR 12 0 1 Phospho (STY) _ESGSTLDLS(ph)GSR_ ESGSTLDLS(0.828)GS(0.172)R ES(-62.09)GS(-49.82)T(-38.29)LDLS(6.84)GS(-6.84)R 0 0 1 0 A0A087WYS3;H7C4X9;A0A087WVZ6;Q9ULU4 A0A087WYS3 A0A087WYS3 ZMYND8 Protein kinase C-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 644.775 2 644.774471 1287.53439 77209.5 1.0193 0.00065723 -0.25487 -0.00016433 0.76446 0.0004929 644.774270652933 649.778498681453 61.088 1.322 61.088 60.29 61.612 0 367 96 5 0 0 0 0.0022697 2 27539 71.879 57.199 5 0.42333 0.53059 0 41034000 29561000 11472000 1687 258 870 966 2690;2691 2690 407 ESGSTLDLSGSR 12 0 1 Phospho (STY) _ESGSTLDLS(ph)GSR_ ESGS(0.005)T(0.01)LDLS(0.673)GS(0.312)R ES(-39.92)GS(-21.7)T(-18.4)LDLS(3.34)GS(-3.34)R 0 0 1 0 A0A087WYS3;H7C4X9;A0A087WVZ6;Q9ULU4 A0A087WYS3 A0A087WYS3 ZMYND8 Protein kinase C-binding protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 644.7753 2 644.774471 1287.53439 76274.88 1.1854 0.00076432 0.26427 0.00017039 1.4497 0.00093472 644.774860739775 649.778652458253 53.978 1.3907 53.978 53.388 54.779 0 573 117 8 0 0 0 0.0010963 2 32826 78.191 63.506 5 1.2893 0.88339 0 48608000 21056000 27552000 1688 258 870 966 2692;2693 2692 407 ESLPPAAEPSPVSK 14 1 0 Phospho (STY) _ESLPPAAEPS(ph)PVSK_ ESLPPAAEPS(0.979)PVS(0.021)K ES(-135.26)LPPAAEPS(16.65)PVS(-16.65)K 0 0 1 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 748.8599 2 744.852722 1487.69089 70009.53 0.71023 0.00052901 0.036462 2.7159E-05 0.74669 0.00055617 744.852763562488 748.859735128629 70.722 2.5643 70.722 69.444 72.008 0 1659 246 9 0 0 0 1.882E-62 7 35121 173.25 149.9 3 0.79475 0.9807 0 872550000 494150000 378400000 1689 359 871 967 2694;2695;2696;2697;2698;2699;2700 2695 565 ESLPPAAEPSPVSK 14 1 0 Phospho (STY) _ESLPPAAEPS(ph)PVSK_ ESLPPAAEPS(0.978)PVS(0.022)K ES(-35.62)LPPAAEPS(16.57)PVS(-16.57)K 0 0 1 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 744.8539 2 744.852722 1487.69089 NaN NaN NaN 0.22879 0.00017042 NaN NaN NaN NaN 72.14 0.30126 72.14 72.008 72.31 0 0 0 0 0.0029743 1 36429 47.532 19.67 3 NaN NaN 0 8533200 8533200 0 1690 359 871 967 2701 2701 565 ESLPPAAEPSPVSK 14 1 0 Phospho (STY) _ESLPPAAEPS(ph)PVSK_ ESLPPAAEPS(0.988)PVS(0.012)K ES(-88.35)LPPAAEPS(19.32)PVS(-19.32)K 0 0 1 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 749.8632 2 744.852722 1487.69089 70314.21 1.0525 0.00078398 -0.03189 -2.3753E-05 1.0206 0.00076023 744.853187498845 748.859720656568 70.944 3.3117 70.944 69.345 72.657 0 2437 296 12 0 0 0 2.3307E-33 6 44976 142.1 125.73 3 1.3126 0.87442 0 1238100000 535770000 702300000 1691 359 871 967 2702;2703;2704;2705;2706;2707 2707 565 ESLTSFYQEEIQER 14 0 1 Phospho (STY) _ES(ph)LTSFYQEEIQER_ ES(0.676)LT(0.159)S(0.159)FY(0.007)QEEIQER ES(6.3)LT(-6.3)S(-6.3)FY(-20.05)QEEIQER 0 0 1 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 924.9006 2 919.895846 1837.77714 63656.85 0.48439 0.00044559 0.12927 0.00011892 0.61366 0.00056451 920.397889270449 925.401158427793 119.27 0.63472 119.27 118.95 119.58 7.6294E-06 262 56 6 0 0 0 0.002827 2 71502 53.001 47.029 4 0.58353 0.71781 0 31266000 20865000 10401000 1692 943 872 968 2708;2709 2709 1618;2856 ESLTSFYQEEIQER 14 0 1 Phospho (STY) _ESLT(ph)SFYQEEIQER_ ES(0.058)LT(0.598)S(0.328)FY(0.015)QEEIQER ES(-10.13)LT(2.6)S(-2.6)FY(-15.9)QEEIQER 0 0 1 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 924.902 2 919.895846 1837.77714 62142.13 0.91569 0.00084234 0.60085 0.00055272 1.5165 0.0013951 919.896094521622 924.900199495967 127.73 0.7295 127.73 127.35 128.08 0 460 61 10 0 0 0 0.012032 1 82426 67.153 52.009 4 0.92811 0.63743 0 46920000 23701000 23220000 1693 943 872 968 2710 2710 1618;2856 ESMAGNKPANAVLHK 15 2 0 Oxidation (M) _ESM(ox)AGNKPANAVLHK_ ESM(1)AGNKPANAVLHK ESM(43.18)AGNKPANAVLHK 0 1 0 1 B3KY63;F5GWX5;A0A0C4DGG9;Q14839 B3KY63 B3KY63 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 533.6131 3 528.271718 1581.79333 82888.84 0.59788 0.00031584 -0.1306 -6.8992E-05 0.46728 0.00024685 528.271752402331 533.61438736879 76.148 0.64586 76.148 75.756 76.402 0 240 57 6 0 0 0 0.0038145 2 39217 43.184 38.553 1 0.96643 1.2259 0 71195000 31004000 40191000 1694 324 873 969 2711;2712 2711 79 ESPGSSEFFQEAVSHGK 17 1 0 Phospho (STY) _ES(ph)PGSSEFFQEAVSHGK_ ES(0.725)PGS(0.138)S(0.138)EFFQEAVSHGK ES(7.21)PGS(-7.21)S(-7.21)EFFQEAVS(-40.33)HGK 0 0 1 0 Q8N108 Q8N108 Q8N108 MIER1 Mesoderm induction early response protein 1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 637.9419 3 634.935039 1901.78329 NaN NaN NaN 0.051949 3.2984E-05 NaN NaN NaN NaN 97.23 0.38252 97.23 96.986 97.369 0 0 0 0 0.0023462 1 54901 40.52 35.902 4 NaN NaN 0 7175000 0 7175000 1695 1149 874 970 2713 2713 2209;2210;2211 ESPGSSEFFQEAVSHGK 17 1 0 Phospho (STY) _ESPGS(ph)SEFFQEAVSHGK_ ES(0.282)PGS(0.359)S(0.359)EFFQEAVSHGK ES(-1.05)PGS(0)S(0)EFFQEAVS(-38.7)HGK 0 0 1 0 Q8N108 Q8N108 Q8N108 MIER1 Mesoderm induction early response protein 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 634.936 3 634.935039 1901.78329 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.082 1 97.082 96.582 97.582 0 0 0 0 0.002241 1 54879 42.309 29.172 4 1696 1149 874 970 2714 2714 2209;2210;2211 ESPTQISIGAFPSTK 15 1 0 Phospho (STY) _ES(ph)PTQISIGAFPSTK_ ES(0.99)PT(0.01)QISIGAFPSTK ES(19.97)PT(-19.97)QIS(-54.44)IGAFPS(-82.34)T(-82.69)K 0 0 1 0 Q5VWN6;Q6IPC8 Q5VWN6 Q5VWN6 FAM208B;C10orf18 Protein FAM208B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 826.4 2 821.889835 1641.76512 66734.58 0.9697 0.00079699 -0.1539 -0.00012649 0.8158 0.0006705 821.889729564172 825.896818993012 107.73 1.091 107.73 107.2 108.29 7.6294E-06 550 82 9 0 0 0 2.5655E-06 3 62631 85.006 77.081 5 0.908 1.1241 0 193380000 100080000 93306000 1697 1113 875 971 2715;2716;2717 2716 2107 ESPTSVGFFNLR 12 0 1 Phospho (STY) _ES(ph)PTSVGFFNLR_ ES(0.984)PT(0.015)S(0.001)VGFFNLR ES(18.15)PT(-18.15)S(-32.72)VGFFNLR 0 0 1 0 Q14781 Q14781 Q14781 CBX2 Chromobox protein homolog 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 722.3322 2 717.326674 1432.6388 72058.2 0.68806 0.00049356 0.075595 5.4227E-05 0.76365 0.00054779 717.326732170209 722.330758459146 121.8 0.89073 121.8 121.37 122.26 -7.6294E-06 364 67 8 0 0 0 0.0065533 2 73339 63.283 48.617 3 0.57269 0.72174 0 58987000 37228000 21760000 1698 1064 876 972 2718;2719 2719 2001 ESPTSVGFFNLR 12 0 1 Phospho (STY) _ES(ph)PTSVGFFNLR_ ES(0.985)PT(0.013)S(0.002)VGFFNLR ES(18.66)PT(-18.66)S(-27.49)VGFFNLR 0 0 1 0 Q14781 Q14781 Q14781 CBX2 Chromobox protein homolog 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 717.3279 2 717.326674 1432.6388 72270.95 0.96445 0.00069183 0.14194 0.00010182 1.1064 0.00079365 717.326861925891 722.330849668323 129.64 1.0441 129.64 129.19 130.23 0 453 96 7 0 0 0 0.0082095 1 83552 54.608 46.303 3 1.7976 1.3228 0 23947000 7648300 16299000 1699 1064 876 972 2720 2720 2001 ESQMTPSHGGSPVGPPQLPIMSSLR 25 0 1 2 Oxidation (M),Phospho (STY) _ES(ph)QM(ox)TPSHGGSPVGPPQLPIM(ox)SSLR_ ESQM(1)TPSHGGSPVGPPQLPIM(1)SSLR ES(0.669)QMT(0.11)PS(0.11)HGGS(0.11)PVGPPQLPIMSSLR ESQM(40.54)TPSHGGSPVGPPQLPIM(40.54)SSLR ES(7.82)QMT(-7.82)PS(-7.82)HGGS(-7.82)PVGPPQLPIMS(-39.2)S(-39.2)LR 0 2 1 0 P55201 P55201 P55201 BRPF1 Peregrin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 901.7525 3 901.41531 2701.2241 64073.55 0.95569 0.00086147 -0.82851 -0.00074683 0.12718 0.00011464 901.749227913034 905.085428227068 106.32 0.67326 106.32 106.01 106.68 0 318 45 11 0 0 0 3.5239E-06 1 61723 40.544 34.943 6 1.6598 2.0884 0 47169000 19280000 27889000 1700 1009 877 973 2721 2721 289;290 1838 ESQVNFQEGQLNSGK 15 1 0 Phospho (STY) _ESQVNFQEGQLNS(ph)GK_ ESQVNFQEGQLNS(1)GK ES(-136.95)QVNFQEGQLNS(136.95)GK 0 0 1 0 P49454 P49454 P49454 CENPF Centromere protein F ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 876.8877 2 872.88053 1743.74651 NaN NaN NaN 0.026943 2.3518E-05 NaN NaN NaN NaN 66.507 0.38988 66.507 66.335 66.725 0 0 0 0 1.9968E-76 1 32319 154.81 130.93 2 NaN NaN 0 10218000 0 10218000 1701 999 878 974 2722 2722 1809 ESQVNFQEGQLNSGKK 16 2 0 Phospho (STY) _ESQVNFQEGQLNS(ph)GKK_ ESQVNFQEGQLNS(1)GKK ES(-77.55)QVNFQEGQLNS(77.55)GKK 0 0 1 1 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 624.9545 3 624.954433 1871.84147 76703.19 0.73939 0.00046208 -0.28068 -0.00017541 0.45871 0.00028667 624.954142374505 630.297115902429 64.447 0.58023 64.447 64.156 64.737 0 192 41 6 0 0 0 6.8419E-08 2 30590 81.357 76.107 2 1.0326 1.2536 0 30703000 13768000 16935000 1702 999 879 975 2723;2724 2724 1809 ESRSPQQSAALPR 13 0 2 Phospho (STY) _ES(ph)RSPQQSAALPR_ ES(0.851)RS(0.149)PQQSAALPR ES(7.57)RS(-7.57)PQQS(-33.64)AALPR 0 0 1 1 A0A0A6YYG7;Q6IBW4;E5RJN3 A0A0A6YYG7 A0A0A6YYG7 NCAPH2 Condensin-2 complex subunit H2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 502.9069 3 502.906866 1505.69877 83808.51 0.4951 0.00024899 -0.62131 -0.00031246 -0.12622 -6.3476E-05 502.906392608908 509.578984347967 57.053 1.7724 57.053 56.024 57.797 0 920 147 10 0 0 0 0.0019461 2 24797 54.501 49.017 3 0.79182 0.99135 0 398690000 217370000 181320000 1703 301 880 976 2725;2726 2725 480;481 ESRSPQQSAALPR 13 0 2 Phospho (STY) _ESRS(ph)PQQSAALPR_ ES(0.463)RS(0.537)PQQSAALPR ES(-0.65)RS(0.65)PQQS(-32.73)AALPR 0 0 1 1 A0A0A6YYG7;Q6IBW4;E5RJN3 A0A0A6YYG7 A0A0A6YYG7 NCAPH2 Condensin-2 complex subunit H2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 502.907 3 502.906866 1505.69877 83729.9 0.4412 0.00022188 -0.5354 -0.00026926 -0.0942 -4.7374E-05 502.90673139025 509.578976534619 28.16 1.8524 28.16 27.676 29.529 0 709 130 11 0 0 0 0.0027638 1 14410 43.592 38.791 3 1.6063 1.4156 0 1318200000 475090000 843080000 1704 301 880 976 2727 2727 480;481 ESRYEEEEEQSR 12 0 2 Unmodified _ESRYEEEEEQSR_ 0 0 0 1 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 524.2252 3 524.225379 1569.65431 80103.77 0.55325 0.00029003 -0.09632 -5.0493E-05 0.45693 0.00023953 524.225313281862 530.897398718624 61.103 0.77353 61.103 60.888 61.662 3.8147E-06 367 57 9 0 0 0 4.9035E-16 2 28173 127.17 107.43 1 0.67583 0.84251 0 141800000 87276000 54520000 1705 1254 881 977 2728;2729 2729 ESSIIAPAPAEDVDTPPR 18 0 1 Phospho (STY) _ESSIIAPAPAEDVDT(ph)PPR_ ESSIIAPAPAEDVDT(1)PPR ES(-78.33)S(-78.33)IIAPAPAEDVDT(78.33)PPR 0 0 1 0 Q75MP9;F2YMM1;Q75MQ0;S4S3R8;A0A090N8E9;Q15910 Q75MP9 Q75MP9 EZH2 Histone-lysine N-methyltransferase EZH2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 978.4581 2 972.951153 1943.88775 61319.61 1.0687 0.0010398 0.0030972 3.0134E-06 1.0718 0.0010428 973.453242214769 977.95517405882 96.156 1.2385 96.156 95.575 96.813 -7.6294E-06 690 106 8 0 0 0 1.2598E-22 4 54457 114.96 98.657 3 1.0361 1.3087 0 122790000 64520000 58267000 1706 278 882 978 2730;2731;2732;2733 2732 2676 ESSIIAPAPAEDVDTPPR 18 0 1 Phospho (STY) _ESSIIAPAPAEDVDT(ph)PPR_ ESSIIAPAPAEDVDT(1)PPR ES(-48.7)S(-48.7)IIAPAPAEDVDT(48.7)PPR 0 0 1 0 Q75MP9;F2YMM1;Q75MQ0;S4S3R8;A0A090N8E9;Q15910 Q75MP9 Q75MP9 EZH2 Histone-lysine N-methyltransferase EZH2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 977.9567 2 972.951153 1943.88775 61615.39 0.71391 0.0006946 1.5981 0.0015549 2.312 0.0022495 973.454641612581 977.956888564155 101.64 1.2518 101.64 101 102.25 0 804 116 10 0 0 0 8.6449E-06 3 65226 70.54 70.54 3 1.9585 1.3037 0 162270000 55106000 107170000 1707 278 882 978 2734;2735;2736 2734 2676 ESSIIAPAPAEDVDTPPRK 19 1 1 Phospho (STY) _ESSIIAPAPAEDVDT(ph)PPRK_ ESSIIAPAPAEDVDT(1)PPRK ES(-79)S(-79)IIAPAPAEDVDT(79)PPRK 0 0 1 1 Q75MP9;F2YMM1;Q75MQ0;S4S3R8;A0A090N8E9;Q15910 Q75MP9 Q75MP9 EZH2 Histone-lysine N-methyltransferase EZH2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 692.0031 3 691.668182 2071.98272 72200.26 0.75982 0.00052555 -0.14385 -9.9495E-05 0.61598 0.00042605 692.002377720474 697.675634563248 85.779 1.7397 85.779 84.87 86.61 -7.6294E-06 918 166 8 0 0 0 1.8838E-18 2 46472 98.973 98.973 3 1.0313 1.2346 0 121430000 62705000 58725000 1708 278 883 979 2737;2738 2738 2676 ESSIIAPAPAEDVDTPPRK 19 1 1 Phospho (STY) _ESSIIAPAPAEDVDT(ph)PPRK_ ESSIIAPAPAEDVDT(1)PPRK ES(-65)S(-66.26)IIAPAPAEDVDT(65)PPRK 0 0 1 1 Q75MP9;F2YMM1;Q75MQ0;S4S3R8;A0A090N8E9;Q15910 Q75MP9 Q75MP9 EZH2 Histone-lysine N-methyltransferase EZH2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1046.5117 2 1036.99863 2071.98272 61133.88 0.63849 0.00066211 0.020703 2.1469E-05 0.65919 0.00068358 1037.50001571499 1046.51112387568 85.863 1.1908 85.863 85.093 86.284 7.6294E-06 399 115 6 0 0 0 7.709E-11 2 46473 81.656 69.388 3 1.1864 1.4032 0 48087000 19733000 28354000 1709 278 883 979 2739;2740 2739 2676 ESSIIAPAPAEDVDTPPRK 19 1 1 Phospho (STY) _ESSIIAPAPAEDVDT(ph)PPRK_ ESSIIAPAPAEDVDT(1)PPRK ES(-40.65)S(-40.65)IIAPAPAEDVDT(40.65)PPRK 0 0 1 1 Q75MP9;F2YMM1;Q75MQ0;S4S3R8;A0A090N8E9;Q15910 Q75MP9 Q75MP9 EZH2 Histone-lysine N-methyltransferase EZH2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1046.0107 2 1036.99863 2071.98272 NaN NaN NaN 0.020524 2.1284E-05 NaN NaN NaN NaN 85.182 0.14416 85.182 85.093 85.237 0 0 0 0 2.3869E-05 1 45941 51.265 37.865 3 NaN NaN 0 11467000 0 11467000 1710 278 883 979 2741 2741 2676 ESSIIAPAPAEDVDTPPRK 19 1 1 Phospho (STY) _ESSIIAPAPAEDVDT(ph)PPRK_ ESSIIAPAPAEDVDT(1)PPRK ES(-72.88)S(-73.07)IIAPAPAEDVDT(72.88)PPRK 0 0 1 1 Q75MP9;F2YMM1;Q75MQ0;S4S3R8;A0A090N8E9;Q15910 Q75MP9 Q75MP9 EZH2 Histone-lysine N-methyltransferase EZH2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1046.5123 2 1036.99863 2071.98272 60131.45 0.59017 0.00061201 0.7118 0.00073814 1.302 0.0013501 1037.00037463556 1046.01044213663 81.479 1.2988 81.479 81.021 82.32 0 801 120 10 0 0 0 1.1379E-13 2 52406 89.374 75.116 3 2.1029 1.6234 0 102740000 32590000 70148000 1711 278 883 979 2742;2743 2743 2676 ESTLHLVLR 9 0 1 Unmodified _ESTLHLVLR_ 0 0 0 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;Q8WYN9;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q9UFQ0;Q96C32;Q96MH4;L8B4I8;L8B196;Q96H31;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;Q66K58;Q59EM9;P62987;P0CG47;P0CG48;M0R1M6;M0R2S1 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;DKFZp434K0435;UbC Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 534.3145 2 534.314023 1066.61349 82678.62 0.6545 0.00034971 -0.069991 -3.7397E-05 0.58451 0.00031231 534.313921960208 539.318017236707 118.83 1.6864 118.83 117.53 119.21 0 628 150 5 0 0 0 6.8549E-131 3 71030 226.68 132.41 1 0.88391 1.1141 0 59765000 32384000 27381000 1712 558 884 980 2744;2745;2746 2745 ESTLHLVLR 9 0 1 Unmodified _ESTLHLVLR_ 0 0 0 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;Q8WYN9;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q9UFQ0;Q96C32;Q96MH4;L8B4I8;L8B196;Q96H31;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;Q66K58;Q59EM9;P62987;P0CG47;P0CG48;M0R1M6;M0R2S1 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;DKFZp434K0435;UbC Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 534.3143 2 534.314023 1066.61349 83499.38 0.59843 0.00031975 -0.2481 -0.00013257 0.35032 0.00018718 534.313793420565 539.819512729891 119.14 0.18042 119.14 119.08 119.26 0 49 15 5 0 0 0 0.00025087 1 71574 107.66 70.964 1 0.70247 0.85243 0 20129000 11799000 8329500 1713 558 884 980 2747 2747 ESTLHLVLR 9 0 1 Unmodified _ESTLHLVLR_ 0 0 0 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;Q8WYN9;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q9UFQ0;Q96C32;Q96MH4;L8B4I8;L8B196;Q96H31;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;Q66K58;Q59EM9;P62987;P0CG47;P0CG48;M0R1M6;M0R2S1 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;DKFZp434K0435;UbC Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 539.3181 2 534.314023 1066.61349 NaN NaN NaN -0.13435 -7.1786E-05 NaN NaN NaN NaN 119.54 1.5137 119.54 119.45 120.97 0 0 0 0 4.9758E-42 2 72118 141.39 69.25 1 NaN NaN 0 20733000 0 20733000 1714 558 884 980 2748;2749 2748 ESTLHLVLR 9 0 1 Unmodified _ESTLHLVLR_ 0 0 0 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;Q8WYN9;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q9UFQ0;Q96C32;Q96MH4;L8B4I8;L8B196;Q96H31;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;Q66K58;Q59EM9;P62987;P0CG47;P0CG48;M0R1M6;M0R2S1 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;DKFZp434K0435;UbC Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 539.3182 2 534.314023 1066.61349 83758.73 0.96452 0.00051536 0.040865 2.1835E-05 1.0054 0.00053719 534.313904436788 539.318097501257 88.249 0.47146 88.249 87.99 88.461 0 136 44 5 0 0 0 0.0037183 1 56780 74.486 36.068 1 1.0307 0.81997 0 12944000 6076500 6867800 1715 558 884 980 2750 2750 ESTLHLVLR 9 0 1 Phospho (STY) _ES(ph)TLHLVLR_ ES(0.811)T(0.189)LHLVLR ES(6.34)T(-6.34)LHLVLR 0 0 1 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;Q8WYN9;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q9UFQ0;Q96C32;Q96MH4;L8B4I8;L8B196;Q96H31;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;Q66K58;Q59EM9;P62987;P0CG47;P0CG48;M0R1M6;M0R2S1 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;DKFZp434K0435;UbC Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 579.3025 2 574.297188 1146.57982 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.2 1 105.2 104.7 105.7 -7.6294E-06 0 0 0 0.0051295 1 61006 54.191 18.364 2 1716 558 884 981 2751 2751 924 ESTQLSPADLTEGKPTDPSK 20 2 0 Phospho (STY) _ES(ph)TQLSPADLTEGKPTDPSK_ ES(0.425)T(0.425)QLS(0.15)PADLTEGKPTDPSK ES(0)T(0)QLS(-4.51)PADLT(-34.79)EGKPT(-41.01)DPS(-46.23)K 0 0 1 1 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 733.0128 3 727.670139 2179.98859 71035.86 0.9099 0.00066211 0.029924 2.1775E-05 0.93982 0.00068388 727.670165939298 733.012885489361 81.6 1.1577 81.6 80.947 82.104 0 471 104 7 0 0 0 3.939E-06 2 43138 52.321 44.099 6 0.8332 1.0514 0 59297000 31504000 27793000 1717 1041 885 982 2752;2753 2752 1934;1935;2916 ESTQLSPADLTEGKPTDPSK 20 2 0 Phospho (STY) _ESTQLS(ph)PADLTEGKPTDPSK_ EST(0.01)QLS(0.99)PADLTEGKPTDPSK ES(-34.35)T(-20.01)QLS(20.01)PADLT(-41.21)EGKPT(-64.04)DPS(-68.25)K 0 0 1 1 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 728.0052 3 727.670139 2179.98859 70650.74 1.1633 0.00084647 0.21195 0.00015423 1.3752 0.0010007 728.004824213661 733.012801013031 79.427 1.0637 79.427 78.992 80.055 0 642 100 9 0 0 0 1.1383E-22 2 50810 104.33 104.33 6 0.49732 0.38183 0 45621000 29462000 16158000 1718 1041 885 982 2754;2755 2754 1934;1935;2916 ESTVHIETHQNTSK 14 1 0 Unmodified _ESTVHIETHQNTSK_ 0 0 0 0 G3V5V3;O60524 G3V5V3 G3V5V3 NEMF Nuclear export mediator factor NEMF MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 537.5975 3 537.597147 1609.76961 86226.51 0.59475 0.00031974 -0.0373 -2.0052E-05 0.55745 0.00029968 537.597393027754 540.268268281939 76.557 0.40227 76.557 76.379 76.781 0 78 34 4 0 0 0 0.0035272 1 39696 36.592 27.465 1 0.75734 0.92702 0 20030000 11288000 8741700 1719 843 886 983 2756 2756 ESTYQGHHTPPVQK 14 1 0 Unmodified _ESTYQGHHTPPVQK_ 0 0 0 0 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A0A075X871 A0A075X871 COX3;COIII;CO3;cox3;coxIII;MT-CO3 Cytochrome c oxidase subunit 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 539.6016 3 536.930349 1607.76922 82257.05 0.19302 0.00010364 -0.013534 -7.2669E-06 0.17949 9.6373E-05 536.930364890656 539.601760825928 68.552 0.73369 68.552 68.331 69.065 0 226 72 5 0 0 0 3.7475E-06 4 33998 83.087 70.247 1 1.3646 1.732 0 40529000 17479000 23051000 1720 0 887 984 2757;2758;2759;2760 2758 ESTYQGHHTPPVQK 14 1 0 Unmodified _ESTYQGHHTPPVQK_ 0 0 0 0 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A0A075X871 A0A075X871 COX3;COIII;CO3;cox3;coxIII;MT-CO3 Cytochrome c oxidase subunit 3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 539.6021 3 536.930349 1607.76922 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.123 1 70.123 69.623 70.623 0 0 0 0 4.1057E-06 1 35017 65.805 48.866 1 1723 0 887 984 2764 2764 ESVFTVEGGHR 11 0 1 Unmodified _ESVFTVEGGHR_ 0 0 0 0 F5H2D2;F5H0C5;F5H3X6;B4DW05;F5GWA7;F5GY37;J3KPX7;Q99623 F5H2D2 F5H2D2 PHB2 Prohibitin-2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 609.2996 2 609.299101 1216.58365 78433.22 0.59084 0.00036 -0.13488 -8.218E-05 0.45596 0.00027782 609.298716522614 614.303222413665 86.71 2.145 86.71 85.582 87.727 0 440 201 5 0 0 0 5.4413E-05 2 47058 93.649 86.429 1 1.5028 1.8818 0 40494000 16574000 23920000 1724 668 888 985 2765;2766 2766 ESVFTVEGGHR 11 0 1 Unmodified _ESVFTVEGGHR_ 0 0 0 0 F5H2D2;F5H0C5;F5H3X6;B4DW05;F5GWA7;F5GY37;J3KPX7;Q99623 F5H2D2 F5H2D2 PHB2 Prohibitin-2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 609.2985 2 609.299101 1216.58365 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.992 1 85.992 85.492 86.492 0 0 0 0 0.0021077 1 46526 65.347 47.961 1 1725 668 888 985 2767 2767 ESYDDVSSFR 10 0 1 Unmodified _ESYDDVSSFR_ 0 0 0 0 Q6IB29;H7C2Q8;Q99848 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 602.7596 2 602.759475 1203.5044 81230.57 0.72106 0.00043463 0.19779 0.00011922 0.91885 0.00055385 602.759361400018 607.764010928024 74.468 0.72433 74.468 74.088 74.812 0 163 63 4 0 0 0 0.0021736 2 37997 84.213 62.065 1 0.74515 0.90009 0 19140000 12258000 6881700 1726 883 889 986 2768;2769 2769 ESYSIYVYK 9 1 0 Unmodified _ESYSIYVYK_ 0 0 0 0 A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257;Q6DRA6;Q6DN03 A0A024RCJ2 A0A024RCJ2 HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 576.2854 2 576.284597 1150.55464 78707.83 0.86578 0.00049894 -0.029565 -1.7038E-05 0.83622 0.0004819 576.284535087696 580.291502061394 92.694 2.2709 92.694 91.577 93.848 0 1151 194 8 0 0 0 0.00018943 4 51343 96.253 67.312 1 1.0744 1.3266 0 653630000 315130000 338510000 1727 211 890 987 2770;2771;2772;2773 2771 ESYSIYVYK 9 1 0 Unmodified _ESYSIYVYK_ 0 0 0 0 A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257;Q6DRA6;Q6DN03 A0A024RCJ2 A0A024RCJ2 HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 580.2927 2 576.284597 1150.55464 79599.08 0.55918 0.00032225 0.353 0.00020343 0.91218 0.00052567 576.284736147284 580.291784256513 82.456 1.0455 82.456 82.025 83.071 0 453 95 8 0 0 0 0.006499 1 52690 71.501 51.715 1 1.0928 0.72968 0 116640000 54574000 62070000 1728 211 890 987 2774 2774 ESYSIYVYK 9 1 0 Phospho (STY) _ESYS(ph)IYVYK_ ES(0.113)Y(0.09)S(0.796)IY(0.002)VYK ES(-8.47)Y(-9.49)S(8.47)IY(-26.51)VY(-39.54)K 0 0 1 0 A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257;Q6DRA6;Q6DN03 A0A024RCJ2 A0A024RCJ2 HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 620.2742 2 616.267762 1230.52097 NaN NaN NaN 0.54045 0.00033306 NaN NaN NaN NaN 93.457 0.82304 93.457 92.992 93.815 0 0 0 0 0.025316 1 51872 43.282 18.359 5 NaN NaN 0 15941000 0 15941000 1729 211 890 988 2775 2775 328;329 ESYSIYVYK 9 1 0 Phospho (STY) _ES(ph)YSIYVYK_ ES(0.539)Y(0.295)S(0.165)IY(0.001)VYK ES(2.62)Y(-2.62)S(-5.14)IY(-27.89)VY(-37.01)K 0 0 1 0 A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257;Q6DRA6;Q6DN03 A0A024RCJ2 A0A024RCJ2 HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 616.2678 2 616.267762 1230.52097 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.206 1 93.206 92.706 93.706 0 0 0 0 0.012451 1 51884 46.426 29.186 5 1730 211 890 988 2776 2776 328;329 ESYSVYVYK 9 1 0 Unmodified _ESYSVYVYK_ 0 0 0 0 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;P57053 B2R4S9 B2R4S9 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 569.2769 2 569.276772 1136.53899 78991.78 0.2691 0.00015319 0.19763 0.00011251 0.46673 0.0002657 569.276857245708 573.283876002244 84.088 3.8229 84.088 81.981 85.804 0 2217 359 8 0 0 0 0.00020213 9 45495 95.531 73.571 1 0.74368 0.91746 0 975360000 565610000 409750000 1731 21 891 989 2777;2778;2779;2780;2781;2782;2783;2784;2785 2782 ESYSVYVYK 9 1 0 Unmodified _ESYSVYVYK_ 0 0 0 0 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;P57053 B2R4S9 B2R4S9 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 573.2839 2 569.276772 1136.53899 NaN NaN NaN 0.2168 0.00012342 NaN NaN NaN NaN 85.932 0.32973 85.932 85.804 86.134 0 0 0 0 0.00010934 1 46584 83.206 47.85 1 NaN NaN 0 6897900 0 6897900 1732 21 891 989 2786 2786 ESYSVYVYK 9 1 0 Unmodified _ESYSVYVYK_ 0 0 0 0 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;P57053 B2R4S9 B2R4S9 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 569.2782 2 569.276772 1136.53899 NaN NaN NaN 0.3966 0.00022578 NaN NaN NaN NaN 86.326 0.52527 86.326 86.213 86.739 0 0 0 0 4.4428E-07 1 47045 93.195 60.89 1 NaN NaN 0 7712000 7712000 0 1733 21 891 989 2787 2787 ESYSVYVYK 9 1 0 Unmodified _ESYSVYVYK_ 0 0 0 0 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;P57053 B2R4S9 B2R4S9 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 573.2843 2 569.276772 1136.53899 NaN NaN NaN 0.14432 8.2158E-05 NaN NaN NaN NaN 86.92 0.20133 86.92 86.813 87.014 0 0 0 0 0.018296 1 47206 50.607 30.047 1 NaN NaN 0 4588300 0 4588300 1734 21 891 989 2788 2788 ESYSVYVYK 9 1 0 Unmodified _ESYSVYVYK_ 0 0 0 0 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;P57053 B2R4S9 B2R4S9 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1137.5477 1 1137.54627 1136.53899 57869.25 -0.0052972 -6.0258E-06 0.357 0.0004061 0.3517 0.00040007 1137.5465649712 1145.56076603097 83.97 2.4913 83.97 82.546 85.037 0 872 228 6 0 0 0 2.0754E-13 1 44420 144.12 97.055 1 0.73344 0.91067 0 102220000 58215000 44010000 1735 21 891 989 2789 2789 ESYSVYVYK 9 1 0 Unmodified _ESYSVYVYK_ 0 0 0 0 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;P57053 B2R4S9 B2R4S9 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 569.2773 2 569.276772 1136.53899 80602.98 0.57773 0.00032889 0.30191 0.00017187 0.87964 0.00050076 569.276891527957 573.283951349932 72.681 1.5739 72.681 71.994 73.568 0 852 146 9 0 0 0 0.006499 2 46208 71.501 51.715 1 0.78861 0.52681 0 227900000 129430000 98468000 1736 21 891 989 2790;2791 2790 ESYSVYVYK 9 1 0 Phospho (STY) _ES(ph)YSVYVYK_ ES(0.941)Y(0.003)S(0.056)VYVYK ES(12.27)Y(-25.01)S(-12.27)VY(-57.19)VY(-69.72)K 0 0 1 0 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;P57053 B2R4S9 B2R4S9 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 609.2604 2 609.259937 1216.50532 79067.13 0.4211 0.00025656 0.11949 7.2798E-05 0.54058 0.00032935 609.259916290963 613.267058196003 85.019 0.72498 85.019 84.389 85.114 7.6294E-06 204 65 4 0 0 0 0.00016654 2 45689 88.495 53.15 5 0.70098 0.88849 0 42133000 24539000 17594000 1737 21 891 990 2792;2793 2792 29 ESYTEEIVSEAESHVSGISR 20 0 1 Unmodified _ESYTEEIVSEAESHVSGISR_ 0 0 0 0 Q5QJE6;J3KP30;B7Z854;E9PRB3 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 740.3507 3 737.013355 2208.01824 71417.71 1.154 0.0008505 0.60761 0.00044782 1.7616 0.0012983 737.348209537637 740.684260825682 121.6 0.42998 121.6 121.38 121.81 0 269 39 10 0 0 0 0.026226 1 78494 25.207 25.207 1 1.3638 0.94263 0 42735000 16858000 25877000 1738 1097 892 991 2794 2794 ETDDTLVLSFVGQTR 15 0 1 Unmodified _ETDDTLVLSFVGQTR_ 0 0 0 0 B4DZP5;B4DSA8;Q16531;F5GY55;B7Z2A1;B7Z859 B4DZP5 B4DZP5 DDB1 DNA damage-binding protein 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 840.9272 2 840.925591 1679.83663 NaN NaN NaN NaN NaN NaN NaN NaN NaN 123.62 1 123.62 123.12 124.12 -7.6294E-06 0 0 0 0.0010903 1 74860 51.013 32.745 1 1739 656 893 992 2795 2795 ETDPVKSPPLPEHQK 15 2 0 Phospho (STY) _ETDPVKS(ph)PPLPEHQK_ ET(0.184)DPVKS(0.816)PPLPEHQK ET(-6.48)DPVKS(6.48)PPLPEHQK 0 0 1 1 Q96JM3;S4R3K0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 599.9635 3 594.620503 1780.83968 76261.79 0.72806 0.00043292 -0.060984 -3.6262E-05 0.66708 0.00039666 594.620099293247 599.963204200005 76.29 0.65674 76.29 76.003 76.66 0 212 57 6 0 0 0 0.00043139 2 39492 54.764 45.581 2 0.73449 0.8861 0 29154000 15106000 14048000 1740 1180 894 993 2796;2797 2797 2316 ETDPVKSPPLPEHQK 15 2 0 Phospho (STY) _ETDPVKS(ph)PPLPEHQK_ ET(0.011)DPVKS(0.989)PPLPEHQK ET(-19.63)DPVKS(19.63)PPLPEHQK 0 0 1 1 Q96JM3;S4R3K0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 594.6211 3 594.620503 1780.83968 77201.27 1.1495 0.00068353 -1.5083 -0.00089686 -0.35877 -0.00021333 594.619291225906 599.963267774628 51.639 2.6586 51.639 50.43 53.089 0 1002 240 8 0 0 0 0.00047358 1 31361 50.493 50.493 2 1.1363 0.85578 0 60172000 28628000 31544000 1741 1180 894 993 2798 2798 2316 ETEAAPTSPPIVPLK 15 1 0 Phospho (STY) _ETEAAPTS(ph)PPIVPLK_ ETEAAPT(0.105)S(0.895)PPIVPLK ET(-52.77)EAAPT(-9.31)S(9.31)PPIVPLK 0 0 1 0 A0A0J9YVS1;A0A0G2JNB1;A0A0G2JNT7;A0A024R9Y2;Q7Z3B3 A0A0J9YVS1 A0A0J9YVS1 KIAA1267;KANSL1 KAT8 regulatory NSL complex subunit 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 815.4121 2 815.410404 1628.80625 69012.06 1.0368 0.00084544 0.18985 0.0001548 1.2267 0.0010002 815.410922625607 819.417466827255 106.12 0.5603 106.12 105.83 106.39 0 165 37 6 0 0 0 2.8444E-06 2 61601 84.297 84.297 3 0.83072 0.98883 0 12022000 7302800 4719300 1742 175 895 994 2799;2800 2800 275;2652 ETEAAPTSPPIVPLK 15 1 0 Phospho (STY) _ETEAAPT(ph)SPPIVPLK_ ETEAAPT(0.5)S(0.5)PPIVPLK ET(-32.84)EAAPT(0)S(0)PPIVPLK 0 0 1 0 A0A0J9YVS1;A0A0G2JNB1;A0A0G2JNT7;A0A024R9Y2;Q7Z3B3 A0A0J9YVS1 A0A0J9YVS1 KIAA1267;KANSL1 KAT8 regulatory NSL complex subunit 1 MULTI-SECPEP 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 820.0588 2 815.410404 1628.80625 69364.04 1.2089 0.00098572 -0.31518 -0.000257 0.89369 0.00072872 815.911616890364 819.417041483695 111.73 0.73691 111.73 111.38 112.12 7.6294E-06 330 72 6 0 0 0 0.011038 1 71748 46.746 41.023 3 1.5221 1.1624 0 17545000 7692600 9852400 1743 175 895 994 2801 2801 275;2652 ETFSSAEGTVDK 12 1 0 2 Phospho (STY) _ETFS(ph)S(ph)AEGTVDK_ ET(0.172)FS(0.906)S(0.898)AEGT(0.025)VDK ET(-9.82)FS(9.82)S(9.82)AEGT(-17.29)VDK 0 0 2 0 A4LAA3;P46100;A0A096LNL9;A0A096LNW1;B7Z1D8 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 719.7676 2 715.759845 1429.50514 73889.93 0.64712 0.00046318 0.085485 6.1187E-05 0.73261 0.00052437 715.759867673686 719.766966915832 70.318 0.67235 70.318 69.996 70.668 0 182 65 4 0 0 0 0.011896 1 34982 41.825 26.623 6 1.1093 1.3904 0 27330000 14010000 13321000 1744 422 896 995 2802 2802 720;721 ETFSSAEGTVDK 12 1 0 2 Phospho (STY) _ETFS(ph)S(ph)AEGTVDK_ ET(0.231)FS(0.877)S(0.877)AEGT(0.015)VDK ET(-8.19)FS(8.19)S(8.19)AEGT(-20.41)VDK 0 0 2 0 A4LAA3;P46100;A0A096LNL9;A0A096LNW1;B7Z1D8 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 715.7604 2 715.759845 1429.50514 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.041 1 70.041 69.541 70.541 0 0 0 0 0.021451 1 34960 40.715 25.513 6 1745 422 896 995 2803 2803 720;721 ETGEHLVHVK 10 1 0 Unmodified _ETGEHLVHVK_ 0 0 0 0 Q5HY54;Q60FE6;Q60FE5;P21333;Q8TES4;B4DTD5;B4E2F9;Q96C61;Q6NXF2 Q5HY54 Q5HY54 FLNA;FLJ00119 Filamin-A ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 578.8146 2 574.806562 1147.59857 NaN NaN NaN 1.3363 0.00076814 NaN NaN NaN NaN 96.62 0.16092 96.62 96.49 96.651 0 0 0 0 0.021206 1 54478 53.968 30.949 1 NaN NaN 0 7627800 0 7627800 1746 973 897 996 2804 2804 ETGYVVERPSTTK 13 1 1 Phospho (STY) _ETGYVVERPS(ph)TTK_ ETGYVVERPS(0.333)T(0.333)T(0.333)K ET(-62.51)GY(-59.35)VVERPS(0)T(0)T(0)K 0 0 1 1 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 782.8729 2 773.861078 1545.7076 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.871 1 59.871 59.371 60.371 3.8147E-06 0 0 0 5.4228E-05 1 27005 67.234 52.246 5 1747 809 898 997 2805 2805 1394;2827;2828 ETIELSPTGRPK 12 1 1 Phospho (STY) _ETIELS(ph)PTGRPK_ ET(0.075)IELS(0.771)PT(0.154)GRPK ET(-10.11)IELS(6.99)PT(-6.99)GRPK 0 0 1 1 A0A087WSW7;F6XU50;Q6I7N8;A0A0B4J1V9;Q9NRZ9 A0A087WSW7 A0A087WSW7 HELLS Lymphoid-specific helicase ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 713.3594 2 704.347607 1406.68066 NaN NaN NaN 0.25704 0.00018105 NaN NaN NaN NaN 72.835 0.49941 72.835 72.451 72.95 0 0 0 0 0.029545 1 36991 45.79 26.003 3 NaN NaN 0 10162000 0 10162000 1748 243 899 998 2806 2806 382;2666 ETIELSPTGRPK 12 1 1 Phospho (STY) _ETIELSPT(ph)GRPK_ ETIELS(0.441)PT(0.559)GRPK ET(-41.72)IELS(-1.03)PT(1.03)GRPK 0 0 1 1 A0A087WSW7;F6XU50;Q6I7N8;A0A0B4J1V9;Q9NRZ9 A0A087WSW7 A0A087WSW7 HELLS Lymphoid-specific helicase MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 704.3483 2 704.347607 1406.68066 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.456 1 72.456 71.956 72.956 0 0 0 0 0.0014751 1 36658 55.899 27.691 3 1749 243 899 998 2807 2807 382;2666 ETIELSPTGRPK 12 1 1 Phospho (STY) _ETIELS(ph)PTGRPK_ ETIELS(0.656)PT(0.343)GRPK ET(-34.86)IELS(2.81)PT(-2.81)GRPK 0 0 1 1 A0A087WSW7;F6XU50;Q6I7N8;A0A0B4J1V9;Q9NRZ9 A0A087WSW7 A0A087WSW7 HELLS Lymphoid-specific helicase MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 714.3633 2 704.347607 1406.68066 72998.24 1.1786 0.00083017 -0.23431 -0.00016503 0.94433 0.00066514 704.347503742226 713.35836097302 57.172 0.87457 57.172 56.647 57.521 -3.8147E-06 310 74 6 0 0 0 0.0061124 1 35158 56.414 41.263 3 1.1685 0.90078 0 44598000 21561000 23037000 1750 243 899 998 2808 2808 382;2666 ETKEEVTPEQLK 12 2 0 Phospho (STY) _ETKEEVT(ph)PEQLK_ ETKEEVT(1)PEQLK ET(-135.9)KEEVT(135.9)PEQLK 0 0 1 1 Q9Y3A2 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 763.8701 2 755.855461 1509.69637 NaN NaN NaN NaN NaN NaN NaN NaN NaN 38.419 1 38.419 37.919 38.919 -3.8147E-06 0 0 0 1.1968E-82 1 22055 187.97 147.9 2 1751 1249 900 999 2809 2809 3005 ETLDAGNYDSPLEFCK 16 1 0 Phospho (STY) _ETLDAGNYDS(ph)PLEFCK_ ET(0.002)LDAGNY(0.083)DS(0.915)PLEFCK ET(-27.03)LDAGNY(-10.4)DS(10.4)PLEFCK 0 0 1 0 Q9NSI6;Q5R2U7;H7C409 Q9NSI6 Q9NSI6 BRWD1;WDR9 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 969.8958 2 969.894989 1937.77542 66536.35 0.89116 0.00086433 -0.19739 -0.00019145 0.69376 0.00067288 970.396872065816 974.402871900294 105.49 0.43912 105.49 105.28 105.72 0 79 28 4 0 0 0 0.00010242 2 61132 62.377 52.32 3 1.1207 1.3292 0 8347900 3881300 4466600 1752 1218 901 1000 2810;2811 2810 2453 ETLEAGNYESPMELCK 16 1 0 Oxidation (M),Phospho (STY) _ETLEAGNYES(ph)PM(ox)ELCK_ ETLEAGNYESPM(1)ELCK ETLEAGNYES(1)PMELCK ETLEAGNYESPM(119.65)ELCK ET(-76.47)LEAGNY(-40.75)ES(40.75)PMELCK 0 1 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 987.9028 2 983.894132 1965.77371 62923.84 0.43661 0.00042958 -0.2488 -0.00024479 0.18782 0.00018479 983.894594414081 987.900683396641 78.886 0.96735 78.886 78.414 79.381 7.6294E-06 408 85 7 0 0 0 1.3419E-25 1 41223 119.65 107.78 3 1.4161 1.7797 0 53917000 22568000 31348000 1753 1167 902 1001 2812 2812 326 2263 ETLEAGNYGSPLEFYK 16 1 0 Phospho (STY) _ETLEAGNYGS(ph)PLEFYK_ ET(0.026)LEAGNY(0.13)GS(0.84)PLEFY(0.004)K ET(-15.1)LEAGNY(-8.1)GS(8.1)PLEFY(-22.85)K 0 0 1 0 Q6RI45 Q6RI45 Q6RI45 BRWD3 Bromodomain and WD repeat-containing protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 953.4261 2 949.416414 1896.81828 64641.85 0.70552 0.00066984 0.044664 4.2405E-05 0.75019 0.00071224 949.416800671466 953.924971245545 114.13 0.63513 114.13 113.79 114.43 0 198 55 6 0 0 0 0.0003774 1 67735 45.077 30.658 4 1.165 1.4158 0 17965000 8603500 9361700 1754 1125 903 1002 2813 2813 2141 ETLEAGNYGSPLEFYK 16 1 0 Phospho (STY) _ETLEAGNYGS(ph)PLEFYK_ ETLEAGNYGS(1)PLEFYK ET(-94.82)LEAGNY(-39.19)GS(39.19)PLEFY(-55.91)K 0 0 1 0 Q6RI45 Q6RI45 Q6RI45 BRWD3 Bromodomain and WD repeat-containing protein 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 953.9255 2 949.416414 1896.81828 63061.02 0.94285 0.00089516 -0.27231 -0.00025853 0.67055 0.00063663 949.917479005001 953.422777895498 121.17 0.90184 121.17 120.87 121.77 0 370 85 8 0 0 0 7.0922E-30 1 78231 123.36 114.04 4 2.5601 1.6624 0 36462000 10145000 26317000 1755 1125 903 1002 2814 2814 2141 ETLSPPRR 8 0 2 Phospho (STY) _ETLS(ph)PPRR_ ET(0.027)LS(0.973)PPRR ET(-15.54)LS(15.54)PPRR 0 0 1 1 A0A024R4Q5;P0C1Z6 A0A024R4Q5 A0A024R4Q5 TFPT TCF3 fusion partner MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 518.2532 2 518.252781 1034.49101 84185.48 0.81758 0.00042372 0.0022023 1.1413E-06 0.81979 0.00042486 518.252760282436 528.260973305856 26.21 0.89491 26.21 25.748 26.643 0 221 46 6 0 0 0 0.010935 1 12266 46.334 14.463 2 1.289 1.1143 0 26779000 11899000 14880000 1756 90 904 1003 2815 2815 117 ETNLDSLPLVDTHSK 15 1 0 Phospho (STY) _ETNLDS(ph)LPLVDTHSK_ ET(0.476)NLDS(0.524)LPLVDTHSK ET(-0.41)NLDS(0.41)LPLVDT(-39.56)HS(-43.45)K 0 0 1 0 V9HWE1;Q53HU8;P08670 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 583.9434 3 583.608263 1747.80296 79365.68 0.95358 0.00055652 -0.23501 -0.00013715 0.71857 0.00041936 583.60802115107 586.279489196996 108.09 0.74904 108.09 107.79 108.54 0 345 56 8 0 0 0 0.00054419 1 63164 51.348 51.348 4 1.1638 1.446 0 93870000 40558000 53312000 1757 960 905 1004 2816 2816 1685 ETNLDSLPLVDTHSK 15 1 0 Phospho (STY) _ETNLDS(ph)LPLVDTHSK_ ETNLDS(1)LPLVDTHSK ET(-49.28)NLDS(49.28)LPLVDT(-66.46)HS(-64.54)K 0 0 1 0 V9HWE1;Q53HU8;P08670 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 878.9163 2 874.908756 1747.80296 63638.7 1.129 0.0009878 0.20064 0.00017554 1.3297 0.0011633 874.908370967503 878.915694438423 108.19 1.114 108.19 107.67 108.78 -7.6294E-06 431 108 7 0 0 0 1.1354E-23 2 69494 124.25 99.975 4 4.0615 2.6384 0 33352000 5954500 27397000 1758 960 905 1004 2817;2818 2817 1685 ETNLDSLPLVDTHSK 15 1 0 Unmodified _ETNLDSLPLVDTHSK_ 0 0 0 0 V9HWE1;Q53HU8;P08670 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 838.9343 2 834.925591 1667.83663 71053.04 0.79977 0.00066775 -0.026654 -2.2254E-05 0.77312 0.00064549 834.925662614383 838.932808259473 110.95 0.56255 110.95 110.58 111.14 0 97 47 4 0 0 0 2.8801E-08 2 65473 98.105 83.229 1 1.1862 1.4119 0 12012000 5332900 6679300 1759 960 905 1005 2819;2820 2819 ETNLDSLPLVDTHSK 15 1 0 Unmodified _ETNLDSLPLVDTHSK_ 0 0 0 0 V9HWE1;Q53HU8;P08670 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 556.9534 3 556.95282 1667.83663 80951.47 0.69284 0.00038588 -0.26713 -0.00014878 0.42571 0.0002371 556.952610887417 559.623948554739 110.96 0.79929 110.96 110.46 111.25 0 192 68 5 0 0 0 0.0099579 1 65578 27.643 27.643 1 1.324 1.6678 0 50385000 23590000 26795000 1760 960 905 1005 2821 2821 ETPHSPGVEDAPIAK 15 1 0 Phospho (STY) _ETPHS(ph)PGVEDAPIAK_ ET(0.022)PHS(0.978)PGVEDAPIAK ET(-16.58)PHS(16.58)PGVEDAPIAK 0 0 1 0 B4DN52;Q53GG0;Q9UHB6;F8VQE1;F8VS07;B3KTW2 B4DN52 B4DN52 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 818.3793 2 814.37181 1626.72907 67400.94 0.63379 0.00051614 0.036397 2.9641E-05 0.67019 0.00054578 814.37178332057 818.378868752484 66.471 1.0472 66.471 66.028 67.075 7.6294E-06 506 75 10 0 0 0 4.9088E-18 3 32736 114.21 99.518 2 2.2485 2.7777 0 526790000 165880000 360920000 1761 644 906 1006 2822;2823;2824 2824 1064 ETPHSPGVEDAPIAK 15 1 0 Phospho (STY) _ETPHS(ph)PGVEDAPIAK_ ET(0.292)PHS(0.708)PGVEDAPIAK ET(-3.86)PHS(3.86)PGVEDAPIAK 0 0 1 0 B4DN52;Q53GG0;Q9UHB6;F8VQE1;F8VS07;B3KTW2 B4DN52 B4DN52 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 546.2563 3 543.250299 1626.72907 81621.96 0.3461 0.00018802 -0.19535 -0.00010613 0.15075 8.1895E-05 543.250334427428 545.921569651346 66.436 1.2408 66.436 65.967 67.208 0 627 92 11 0 0 0 0.00047541 2 32675 59.512 39.934 2 2.2355 2.7578 0 999750000 323030000 676730000 1762 644 906 1006 2825;2826 2826 1064 ETPHSPGVEDAPIAK 15 1 0 Phospho (STY) _ETPHS(ph)PGVEDAPIAK_ ET(0.013)PHS(0.987)PGVEDAPIAK ET(-18.72)PHS(18.72)PGVEDAPIAK 0 0 1 0 B4DN52;Q53GG0;Q9UHB6;F8VQE1;F8VS07;B3KTW2 B4DN52 B4DN52 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 818.382 2 814.37181 1626.72907 67080.37 1.2044 0.00098084 0.005315 4.3284E-06 1.2097 0.00098517 814.372024192477 818.378844174302 51.29 3.4351 51.29 49.676 53.112 0 1568 315 10 0 0 0 5.0007E-06 3 30539 81.904 71.672 2 6.2282 4.1578 0 342310000 40967000 301340000 1763 644 906 1006 2827;2828;2829 2827 1064 ETPHSPGVEDAPIAK 15 1 0 Phospho (STY) _ETPHS(ph)PGVEDAPIAK_ ET(0.103)PHS(0.897)PGVEDAPIAK ET(-9.41)PHS(9.41)PGVEDAPIAK 0 0 1 0 B4DN52;Q53GG0;Q9UHB6;F8VQE1;F8VS07;B3KTW2 B4DN52 B4DN52 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 543.2513 3 543.250299 1626.72907 81497.8 1.0246 0.00055664 -0.21643 -0.00011757 0.80822 0.00043907 543.250534711696 545.921747575523 51.381 3.8485 51.381 50.01 53.858 -3.8147E-06 2068 340 10 0 0 0 0.00062094 1 30863 45.434 34.329 2 5.6523 3.7709 0 506800000 74548000 432250000 1764 644 906 1006 2830 2830 1064 ETPSSILLGSNQGSVSK 17 1 0 Phospho (STY) _ETPSSILLGSNQGS(ph)VSK_ ETPSSILLGS(0.102)NQGS(0.462)VS(0.435)K ET(-37.14)PS(-29.85)S(-29.85)ILLGS(-6.58)NQGS(0.26)VS(-0.26)K 0 0 1 0 A0A087WYS3;H7C4X9;A0A087WVZ6 A0A087WYS3 A0A087WYS3 ZMYND8 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 892.4279 2 892.427313 1782.84007 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.395 1 97.395 96.895 97.895 0 0 0 0 0.001567 1 55106 46.925 22.882 6 1765 258 907 1007 2831 2831 408 ETPSSILLGSNQGSVSK 17 1 0 Phospho (STY) _ETPSSILLGSNQGS(ph)VSK_ ETPS(0.001)S(0.001)ILLGS(0.216)NQGS(0.622)VS(0.161)K ET(-39.58)PS(-30.25)S(-30.25)ILLGS(-4.6)NQGS(4.6)VS(-5.88)K 0 0 1 0 A0A087WYS3;H7C4X9;A0A087WVZ6 A0A087WYS3 A0A087WYS3 ZMYND8 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 892.4283 2 892.427313 1782.84007 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.419 1 97.419 96.919 97.919 7.6294E-06 0 0 0 0.00090213 1 55124 51.495 31.404 6 1766 258 907 1007 2832 2832 408 ETQVILLDTPGIISPGK 17 1 0 Phospho (STY) _ETQVILLDTPGIIS(ph)PGK_ ETQVILLDTPGIIS(1)PGK ET(-192.96)QVILLDT(-49.15)PGIIS(49.15)PGK 0 0 1 0 J3QSB2;J3QRV9;O75616 J3QSB2 J3QSB2 ERAL1 GTPase Era, mitochondrial MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 930.9905 2 930.98955 1859.96455 63932.07 0.98148 0.00091375 0.14317 0.00013329 1.1247 0.001047 930.989528816494 934.996677542438 128.05 0.66905 128.05 127.74 128.41 0 327 59 8 0 0 0 9.5771E-152 3 77648 214.5 199.6 3 0.4937 0.62434 0 45011000 30436000 14575000 1767 898 908 1008 2833;2834;2835 2835 1524 ETQVILLDTPGIISPGK 17 1 0 Phospho (STY) _ETQVILLDTPGIIS(ph)PGK_ ETQVILLDT(0.121)PGIIS(0.879)PGK ET(-54.59)QVILLDT(-8.61)PGIIS(8.61)PGK 0 0 1 0 J3QSB2;J3QRV9;O75616 J3QSB2 J3QSB2 ERAL1 GTPase Era, mitochondrial MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 931.4921 2 930.98955 1859.96455 62564.28 0.91582 0.00085262 -0.074139 -6.9023E-05 0.84168 0.0007836 930.989550418324 935.498276941319 134.72 0.25471 134.72 134.56 134.81 0 29 9 7 0 0 0 6.121E-05 1 87015 58.073 51.887 3 0.36093 0.26789 0 8590800 6501200 2089700 1768 898 908 1008 2836 2836 1524 ETSVSKEDTDHEEKASNEDVTK 22 3 0 2 Phospho (STY) _ETS(ph)VSKEDTDHEEKAS(ph)NEDVTK_ ET(0.144)S(0.824)VS(0.067)KEDT(0.217)DHEEKAS(0.727)NEDVT(0.021)K ET(-7.68)S(7.68)VS(-12.54)KEDT(-5.36)DHEEKAS(5.36)NEDVT(-15.72)K 0 0 2 2 Q05CM9;O75475 Q05CM9 Q05CM9 PSIP1 PC4 and SFRS1-interacting protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 880.3551 3 880.019547 2637.03681 64024.28 0.88391 0.00077786 0.1873 0.00016483 1.0712 0.00094269 880.354046880909 888.033892834225 17.836 0.4529 17.836 17.63 18.083 0 99 18 10 0 0 0 1.2052E-05 1 4980 41.89 28.435 15 1.0122 0.88211 0 148410000 72957000 75455000 1769 936 909 1009 2837 2837 1604;1605 ETVNSPAIYK 10 1 0 Phospho (STY) _ETVNS(ph)PAIYK_ ETVNS(1)PAIYK ET(-43.98)VNS(43.98)PAIY(-45.26)K 0 0 1 0 Q9Y3A2 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 605.2873 2 601.278661 1200.54277 77748.07 0.90132 0.00054194 -0.36728 -0.00022084 0.53404 0.00032111 601.278551858814 605.285336070029 61.012 1.2826 61.012 60.277 61.559 0 516 93 8 0 0 0 0.001672 2 27621 75.819 54.138 3 0.83529 1.0345 0 165480000 93023000 72455000 1770 1249 910 1010 2838;2839 2839 2573 ETVNSPAIYK 10 1 0 Phospho (STY) _ETVNS(ph)PAIYK_ ETVNS(1)PAIYK ET(-65.93)VNS(61.91)PAIY(-61.91)K 0 0 1 0 Q9Y3A2 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 605.2863 2 601.278661 1200.54277 78210.67 1.0301 0.00061937 -0.061704 -3.7101E-05 0.96839 0.00058227 601.278608289573 605.285686409086 54.502 1.9575 54.502 53.749 55.706 0 942 169 9 0 0 0 2.6068E-06 3 33310 100.69 78.195 3 0.81517 0.54403 0 112820000 61068000 51751000 1771 1249 910 1010 2840;2841;2842 2841 2573 EVAATEEDVTRLPSPTSPFSSLSQDQAATSK 31 1 1 2 Phospho (STY) _EVAATEEDVTRLPS(ph)PTS(ph)PFSSLSQDQAATSK_ EVAAT(0.018)EEDVT(0.014)RLPS(0.783)PT(0.462)S(0.535)PFS(0.125)S(0.044)LS(0.016)QDQAAT(0.002)S(0.002)K EVAAT(-16.59)EEDVT(-19.2)RLPS(5.85)PT(-0.83)S(0.83)PFS(-8.38)S(-13.41)LS(-18.16)QDQAAT(-29.16)S(-28.97)K 0 0 2 1 E9PMS6;B7Z8W3;A0A1P7ZIM8;A0A0A0MTE2;E9PMT2;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMP7;H0Y424 E9PMS6 E9PMS6 LMO7 LIM domain only protein 7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1137.8424 3 1137.17432 3408.50112 56700.62 0.41994 0.00047754 0.13605 0.00015472 0.55599 0.00063226 1137.50986200651 1143.5161863845 118.12 0.88416 118.12 117.78 118.66 0 694 76 14 0 0 0 5.0988E-11 1 70722 46.392 41.948 45 2.49 3.0064 0 234520000 63585000 170940000 1772 391 911 1011 2843 2843 664;665;2708 EVADIFNAPSDDEEFVGFR 19 0 1 Phospho (STY) _EVADIFNAPS(ph)DDEEFVGFR_ EVADIFNAPS(1)DDEEFVGFR EVADIFNAPS(92.58)DDEEFVGFR 0 0 1 0 A8K8X5;A0A024RA51;Q96GN5 A8K8X5 A8K8X5 CDCA7L Cell division cycle-associated 7-like protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1124.48 2 1118.97536 2235.93616 56432.8 0.34291 0.00038371 0.18511 0.00020713 0.52802 0.00059084 1119.47717523933 1124.48061467148 131.02 0.86198 131.02 130.7 131.57 0 498 76 10 0 0 0 3.6327E-17 1 79614 92.575 76.043 1 0.41213 0.51995 0 68397000 49140000 19257000 1773 179 912 1012 2844 2844 279 EVDEDSEPEREVR 13 0 2 Phospho (STY) _EVDEDS(ph)EPEREVR_ EVDEDS(1)EPEREVR EVDEDS(41.97)EPEREVR 0 0 1 1 F8WC91;B9A018;Q53GS9 F8WC91 F8WC91 USP39 U4/U6.U5 tri-snRNP-associated protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 556.8965 3 556.896473 1667.66759 80914.69 0.54967 0.00030611 0.0025881 1.4413E-06 0.55226 0.00030755 556.896489941348 563.568558881633 50.112 0.67642 50.112 49.703 50.379 0 271 59 7 0 0 0 0.0034362 1 20014 41.967 41.967 1 0.65014 0.79518 0 22836000 13674000 9162200 1774 728 913 1013 2845 2845 1200 EVDEDSEPEREVR 13 0 2 Phospho (STY) _EVDEDS(ph)EPEREVR_ EVDEDS(1)EPEREVR EVDEDS(40.24)EPEREVR 0 0 1 1 F8WC91;B9A018;Q53GS9 F8WC91 F8WC91 USP39 U4/U6.U5 tri-snRNP-associated protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 563.9031 3 556.896473 1667.66759 81360.46 0.65082 0.00036244 -0.20399 -0.0001136 0.44683 0.00024884 556.896334316438 563.568448780457 28.017 0.56231 28.017 27.659 28.221 0 180 39 7 0 0 0 0.0041515 1 13980 40.237 27.683 1 0.7501 0.64898 0 31665000 18304000 13361000 1775 728 913 1013 2846 2846 1200 EVDEISPEDDQR 12 0 1 Phospho (STY) _EVDEIS(ph)PEDDQR_ EVDEIS(1)PEDDQR EVDEIS(51.13)PEDDQR 0 0 1 0 A0A087WWP4;Q96T37 A0A087WWP4 A0A087WWP4 RBM15 Putative RNA-binding protein 15 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 761.3019 2 756.298508 1510.58246 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.406 1 50.406 49.906 50.906 0 0 0 0 0.0024907 1 20326 51.135 36.448 1 1776 260 914 1014 2847 2847 418 EVDEQMLNVQNK 12 1 0 Oxidation (M) _EVDEQM(ox)LNVQNK_ EVDEQM(1)LNVQNK EVDEQM(237.51)LNVQNK 0 1 0 0 B7ZAF0;Q5JP53;Q6LC01;Q5SU16;P07437;Q5ST81;B7ZAK1;B4DY90;B4DMJ5;Q9BUU9;B4E052;B4DQN9;Q8N6N5;Q8IZ29;Q8IWP6;P68371;Q1KSF8;B4DMU8;O43209;A0A024QZU2;B3KML9;B2R6L0;Q9BVA1;Q13885;Q6P602;Q96B85;B4DXZ5;Q9UGA2;B7Z4N1;A4UCT2;Q96HX0 B7ZAF0 B7ZAF0 TUBB;TUBB2C;TUBB4B;XTP3TPATP1;TUBB2B;TUBB2A;DKFZp566F223 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2B chain;Tubulin beta-2A chain MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 735.8535 2 731.845755 1461.67696 71453.27 0.99128 0.00072547 -0.18122 -0.00013262 0.81007 0.00059284 731.845570109241 735.852845151383 55.965 1.025 55.965 55.426 56.451 0 374 82 7 0 0 0 1.1345E-170 2 24180 237.51 208.34 1 2.5332 3.1853 0 28816000 9678900 19137000 1777 718 915 1015 2848;2849 2849 184 EVDEQMLNVQNK 12 1 0 Oxidation (M) _EVDEQM(ox)LNVQNK_ EVDEQM(1)LNVQNK EVDEQM(43.63)LNVQNK 0 1 0 0 B7ZAF0;Q5JP53;Q6LC01;Q5SU16;P07437;Q5ST81;B7ZAK1;B4DY90;B4DMJ5;Q9BUU9;B4E052;B4DQN9;Q8N6N5;Q8IZ29;Q8IWP6;P68371;Q1KSF8;B4DMU8;O43209;A0A024QZU2;B3KML9;B2R6L0;Q9BVA1;Q13885;Q6P602;Q96B85;B4DXZ5;Q9UGA2;B7Z4N1;A4UCT2;Q96HX0 B7ZAF0 B7ZAF0 TUBB;TUBB2C;TUBB4B;XTP3TPATP1;TUBB2B;TUBB2A;DKFZp566F223 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2B chain;Tubulin beta-2A chain MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 735.8538 2 731.845755 1461.67696 71956.7 0.88578 0.00064825 0.53975 0.00039501 1.4255 0.0010433 731.846109325583 735.853083258791 36.673 0.38953 36.673 36.491 36.88 0 113 32 4 0 0 0 0.028536 1 20741 43.635 35.538 1 0.90057 0.71027 0 6884500 2751800 4132700 1778 718 915 1015 2850 2850 184 EVDGLLTSEPMGSPVSSK 18 1 0 Oxidation (M),Phospho (STY) _EVDGLLTSEPM(ox)GS(ph)PVSSK_ EVDGLLTSEPM(1)GSPVSSK EVDGLLTS(0.043)EPMGS(0.896)PVS(0.031)S(0.031)K EVDGLLTSEPM(80.61)GSPVSSK EVDGLLT(-35.47)S(-13.19)EPMGS(13.19)PVS(-14.67)S(-14.67)K 0 1 1 0 H3BUF6;Q8WWM7;A0A024QZC0;A0A024QZB7;A0A024QZ91 H3BUF6 H3BUF6 ATXN2L Ataxin-2-like protein ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 968.9425 2 964.931571 1927.84859 NaN NaN NaN 2.2655 0.002186 NaN NaN NaN NaN 89.749 0.24966 89.749 89.582 89.832 0 0 0 0 1.599E-08 2 49259 80.609 61.781 5 NaN NaN 0 10486000 0 10486000 1779 875 916 1016 2851;2852 2852 235 1484 EVDYSDSLTEK 11 1 0 Phospho (STY) _EVDYSDS(ph)LTEK_ EVDYS(0.038)DS(0.937)LT(0.025)EK EVDY(-76.26)S(-13.95)DS(13.95)LT(-15.66)EK 0 0 1 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;B3KNW7;B4E0F1;B4DSI8;K7EP28 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 683.2764 2 683.276513 1364.53847 74122.45 0.60827 0.00041562 0.19106 0.00013055 0.79934 0.00054617 683.276606705443 687.283733984939 59.387 1.244 59.387 58.673 59.917 -3.8147E-06 489 98 7 0 0 0 3.4374E-19 2 26851 142.83 106.15 4 0.3766 0.47306 0 54900000 38550000 16351000 1780 434 917 1017 2853;2854 2854 752 EVEDKESEGEEEDEDEDLSK 20 2 0 Phospho (STY) _EVEDKES(ph)EGEEEDEDEDLSK_ EVEDKES(1)EGEEEDEDEDLSK EVEDKES(42.04)EGEEEDEDEDLS(-42.04)K 0 0 1 1 O95218 O95218 O95218 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 812.9844 3 807.30592 2418.89593 67906.61 0.61659 0.00049778 0.20082 0.00016212 0.81741 0.0006599 807.640457620091 812.983204268566 50.639 0.90466 50.639 50.21 51.115 0 551 74 10 0 0 0 2.141E-05 1 20290 45.047 45.047 2 1.2747 1.6069 0 57052000 25027000 32025000 1781 942 918 1018 2855 2855 1612 EVELVSE 7 0 0 Phospho (STY) _EVELVS(ph)E_ EVELVS(1)E EVELVS(166.68)E 0 0 1 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 ISO-MSMS -1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 884.3662 1 884.364871 883.357595 NaN NaN NaN 0.42115 0.00037245 NaN NaN NaN NaN 74.931 1.7762 74.931 74.059 75.836 -7.6294E-06 0 0 0 2.0771E-85 2 38767 166.68 127.89 1 1782 931 919 1019 2856;2857 2857 1585 EVELVSE 7 0 0 Phospho (STY) _EVELVS(ph)E_ EVELVS(1)E EVELVS(153.04)E 0 0 1 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 ISO-MSMS -1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 884.3666 1 884.364871 883.357595 NaN NaN NaN 0.35523 0.00031416 NaN NaN NaN NaN 81.666 1.8086 81.666 80.839 82.647 0 0 0 0 1.5056E-69 1 51949 153.04 112.93 1 1783 931 919 1019 2858 2858 1585 EVIEIEDASPTK 12 1 0 Phospho (STY) _EVIEIEDAS(ph)PTK_ EVIEIEDAS(0.946)PT(0.054)K EVIEIEDAS(12.46)PT(-12.46)K 0 0 1 0 A4LAA3;P46100 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 709.832 2 705.82363 1409.63271 72068.8 1.0258 0.00072402 -0.17741 -0.00012522 0.84837 0.0005988 705.823377144437 709.830650414794 80.779 1.5851 80.779 79.926 81.512 -7.6294E-06 828 146 8 0 0 0 6.1011E-149 5 42880 228.8 198.55 2 0.82682 1.0236 0 199560000 104440000 95117000 1784 422 920 1020 2859;2860;2861;2862;2863 2863 722 EVIEIEDASPTK 12 1 0 Phospho (STY) _EVIEIEDAS(ph)PTK_ EVIEIEDAS(0.848)PT(0.152)K EVIEIEDAS(7.46)PT(-7.46)K 0 0 1 0 A4LAA3;P46100 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 705.8218 2 705.82363 1409.63271 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.908 1 79.908 79.408 80.408 0 0 0 0 0.0013489 1 42217 109 71.522 2 1785 422 920 1020 2864 2864 722 EVIEIEDASPTK 12 1 0 Phospho (STY) _EVIEIEDAS(ph)PTK_ EVIEIEDAS(0.807)PT(0.193)K EVIEIEDAS(6.22)PT(-6.22)K 0 0 1 0 A4LAA3;P46100 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 705.8238 2 705.82363 1409.63271 72168.38 0.98499 0.00069523 0.48625 0.00034321 1.4712 0.0010384 705.823671353297 709.830891410603 82.603 1.217 82.603 82.077 83.294 0 416 112 5 0 0 0 8.9437E-16 1 52736 121.56 100.33 2 1.4586 0.97275 0 107960000 40150000 67813000 1786 422 920 1020 2865 2865 722 EVKEEIDPDEEESAK 15 2 0 Phospho (STY) _EVKEEIDPDEEES(ph)AK_ EVKEEIDPDEEES(1)AK EVKEEIDPDEEES(256.89)AK 0 0 1 1 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 913.8836 2 913.882601 1825.75065 64276.57 0.50514 0.00046164 0.0083564 7.6367E-06 0.5135 0.00046928 913.882205655656 921.897107961594 62.846 0.5477 62.846 62.519 63.066 0 201 43 6 0 0 0 5.0993E-233 2 29355 256.89 228.78 1 0.60159 0.73961 0 34064000 20614000 13449000 1787 1062 921 1021 2866;2867 2866 1997 EVKEEIDPDEEESAK 15 2 0 Phospho (STY) _EVKEEIDPDEEES(ph)AK_ EVKEEIDPDEEES(1)AK EVKEEIDPDEEES(191.4)AK 0 0 1 1 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 921.8975 2 913.882601 1825.75065 63870.89 0.99224 0.00090679 0.075113 6.8644E-05 1.0674 0.00097543 913.882851018841 921.896925420469 39.474 1.5224 39.474 38.751 40.273 0 922 136 10 0 0 0 9.6746E-90 3 23056 191.4 163.12 1 1.0215 0.76198 0 123840000 62487000 61356000 1788 1062 921 1021 2868;2869;2870 2870 1997 EVLVVNSQGEISR 13 0 1 Phospho (STY) _EVLVVNS(ph)QGEISR_ EVLVVNS(0.977)QGEIS(0.023)R EVLVVNS(16.25)QGEIS(-16.25)R 0 0 1 0 E7ETD6;Q12830;F5GXF5;A0A0A0MR81;B4DDK2;B4DM40 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 755.3691 2 755.36907 1508.72359 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.369 1 85.369 84.869 85.869 0 0 0 0 1.594E-05 1 46095 77.42 30.223 2 1789 791 922 1022 2871 2871 1335 EVLYDSEGLSGEER 14 0 1 2 Phospho (STY) _EVLYDS(ph)EGLS(ph)GEER_ EVLY(0.011)DS(0.989)EGLS(1)GEER EVLY(-19.73)DS(19.73)EGLS(47.37)GEER 0 0 2 0 A0A024QZH6;Q9H7N4 A0A024QZH6 A0A024QZH6 SR-A1;SCAF1 Splicing factor, arginine/serine-rich 19 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 871.8326 2 871.83153 1741.64851 66686.14 0.73739 0.00064288 -0.0018023 -1.5713E-06 0.73559 0.00064131 871.831562337698 876.835883183983 85.975 0.6812 85.975 85.688 86.369 0 218 63 4 0 0 0 2.7784E-08 2 46425 96.489 79.208 3 0.66522 0.82774 0 36928000 20173000 16755000 1790 15 923 1023 2872;2873 2873 17;18 EVLYDSEGLSGEER 14 0 1 Phospho (STY) _EVLYDSEGLS(ph)GEER_ EVLYDS(0.248)EGLS(0.752)GEER EVLY(-33.12)DS(-4.83)EGLS(4.83)GEER 0 0 1 0 A0A024QZH6;Q9H7N4 A0A024QZH6 A0A024QZH6 SR-A1;SCAF1 Splicing factor, arginine/serine-rich 19 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 831.8492 2 831.848365 1661.68218 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.285 1 81.285 80.785 81.785 7.6294E-06 0 0 0 2.6668E-05 1 43233 60.55 29.986 3 1791 15 923 1024 2874 2874 17;18 EVNSQEEEEEELLRK 15 1 1 Phospho (STY) _EVNS(ph)QEEEEEELLRK_ EVNS(1)QEEEEEELLRK EVNS(58.69)QEEEEEELLRK 0 0 1 1 D6RC40;D6RCQ3;A0A024R7R0;Q96RL1 D6RC40 D6RC40 UIMC1;RAP80 BRCA1-A complex subunit RAP80 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 653.9637 3 647.621008 1939.8412 76593.03 1.1656 0.00075484 -0.2778 -0.00017991 0.88776 0.00057493 647.620949779994 653.628355739552 74.531 0.78739 74.531 74.189 74.976 0 449 71 9 0 0 0 0.00027753 1 47189 58.688 52.657 1 1.2173 0.93862 0 51263000 21688000 29575000 1792 139 924 1025 2875 2875 209 EVQQHALIHQESK 13 1 0 Unmodified _EVQQHALIHQESK_ 0 0 0 0 Q8WWU0;Q8WXB7;E9PEP7;A0A024RC04;B7ZKJ5;P17010 Q8WWU0 Q8WWU0 ZFX Zinc finger X-chromosomal protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 518.9423 3 516.270595 1545.78995 88247.36 0.33638 0.00017366 0.032685 1.6874E-05 0.36906 0.00019054 516.270139751065 518.941881702348 78.458 0.4978 78.458 78.26 78.758 0 140 45 5 0 0 0 0.0029614 2 41090 43.813 34.992 1 0.59229 0.73653 0 25110000 15525000 9585000 1793 204 925 1026 2876;2877 2877 EVQSPEGMISLR 12 0 1 Oxidation (M),Phospho (STY) _EVQS(ph)PEGM(ox)ISLR_ EVQSPEGM(1)ISLR EVQS(1)PEGMISLR EVQSPEGM(110.8)ISLR EVQS(53.64)PEGMIS(-53.64)LR 0 1 1 0 A0A0A0MRW6;B4DF80;Q9H6R4;B3KPN5 A0A0A0MRW6 A0A0A0MRW6 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 726.3275 2 721.323274 1440.632 70367.91 0.8152 0.00058802 -0.35715 -0.00025762 0.45805 0.0003304 721.323372753746 726.3266046686 76.663 1.5619 76.663 75.901 77.462 0 694 138 7 0 0 0 1.1664E-13 4 39378 110.8 69.117 2 1.5793 1.9959 0 170920000 63154000 107770000 1794 289 926 1027 2878;2879;2880;2881 2879 70 457 EVQSPEGMISLR 12 0 1 Oxidation (M),Phospho (STY) _EVQS(ph)PEGM(ox)ISLR_ EVQSPEGM(1)ISLR EVQS(1)PEGMISLR EVQSPEGM(89.43)ISLR EVQS(46.45)PEGMIS(-46.45)LR 0 1 1 0 A0A0A0MRW6;B4DF80;Q9H6R4;B3KPN5 A0A0A0MRW6 A0A0A0MRW6 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 726.329 2 721.323274 1440.632 71611.36 1.1471 0.00082746 -0.17219 -0.00012421 0.97495 0.00070325 721.323267470228 726.327401036508 77.54 1.5609 77.54 76.766 78.327 0 901 146 9 0 0 0 0.00011017 3 49275 89.43 60.806 2 1.1268 0.7564 0 106760000 50257000 56503000 1795 289 926 1027 2882;2883;2884 2882 70 457 EVQTTPSTASNKVSPEK 17 2 0 Phospho (STY) _EVQTTPSTASNKVS(ph)PEK_ EVQT(0.008)T(0.012)PS(0.148)T(0.148)AS(0.123)NKVS(0.561)PEK EVQT(-18.23)T(-16.58)PS(-5.8)T(-5.8)AS(-6.59)NKVS(5.8)PEK 0 0 1 1 Q7L5N7 Q7L5N7 Q7L5N7 LPCAT2 Lysophosphatidylcholine acyltransferase 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 633.6407 3 628.297977 1881.8721 76561.92 0.76145 0.00047842 0.18189 0.00011428 0.94334 0.0005927 628.632396866074 633.640773608463 45.8 0.63584 45.8 45.433 46.069 0 211 45 7 0 0 0 0.00035724 1 17161 40.81 30.613 6 1.6403 1.73 0 8124100 3119000 5005000 1796 1132 927 1028 2885 2885 2165 EVSIEDTGVDVDPEK 15 1 0 Phospho (STY) _EVS(ph)IEDTGVDVDPEK_ EVS(1)IEDTGVDVDPEK EVS(85.03)IEDT(-85.03)GVDVDPEK 0 0 1 0 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 856.3709 2 856.36913 1710.72371 65725.54 0.85241 0.00072998 -0.01408 -1.2057E-05 0.83833 0.00071792 856.369203193444 860.375807995856 92.528 1.1108 92.528 91.972 93.082 7.6294E-06 681 98 9 0 0 0 2.6329E-104 3 51546 197.06 177.45 2 0.50115 0.6199 0 287690000 193420000 94264000 1797 560 928 1029 2886;2887;2888 2888 927 EVSIEDTGVDVDPEK 15 1 0 Phospho (STY) _EVS(ph)IEDTGVDVDPEK_ EVS(1)IEDTGVDVDPEK EVS(38.77)IEDT(-38.77)GVDVDPEK 0 0 1 0 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 856.8708 2 856.36913 1710.72371 NaN NaN NaN -0.82684 -0.00070808 NaN NaN NaN NaN 93.102 0.13505 93.102 93.044 93.179 7.6294E-06 0 0 0 5.275E-05 1 51805 77.776 61.886 2 NaN NaN 0 6221400 6221400 0 1798 560 928 1029 2889 2889 927 EVSIEDTGVDVDPEK 15 1 0 Phospho (STY) _EVS(ph)IEDTGVDVDPEK_ EVS(1)IEDTGVDVDPEK EVS(33.02)IEDT(-33.02)GVDVDPEK 0 0 1 0 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 860.8785 2 856.36913 1710.72371 66009.2 1.1084 0.00094924 0.34122 0.00029221 1.4497 0.0012414 856.369278015737 860.376624174314 98.69 1.4187 98.69 98.088 99.506 -7.6294E-06 824 133 10 0 0 0 2.2357E-06 4 63225 85.845 71.687 2 1.1529 0.77032 0 197580000 93889000 103690000 1799 560 928 1029 2890;2891;2892;2893 2890 927 EVSIEDTGVDVDPEKLEMESK 21 2 0 Oxidation (M),Phospho (STY) _EVS(ph)IEDTGVDVDPEKLEM(ox)ESK_ EVSIEDTGVDVDPEKLEM(1)ESK EVS(0.962)IEDT(0.038)GVDVDPEKLEMESK EVSIEDTGVDVDPEKLEM(42.17)ESK EVS(14.03)IEDT(-14.03)GVDVDPEKLEMES(-36.89)K 0 1 1 1 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 821.3709 3 815.692392 2444.05535 66265.73 1.2161 0.00099195 0.012596 1.0274E-05 1.2287 0.0010022 816.026585713598 821.03532743623 110.52 0.92069 110.52 110.01 110.94 -7.6294E-06 577 83 10 0 0 0 1.6681E-05 1 70882 42.172 37.555 3 0.95499 0.71891 0 62426000 30760000 31666000 1800 560 929 1030 2894 2894 143 927 EVSPLQPVNENMQVNK 16 1 0 Oxidation (M),Phospho (STY) _EVS(ph)PLQPVNENM(ox)QVNK_ EVSPLQPVNENM(1)QVNK EVS(1)PLQPVNENMQVNK EVSPLQPVNENM(106.6)QVNK EVS(106.6)PLQPVNENMQVNK 0 1 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 965.4482 2 961.439898 1920.86524 62510.94 0.33123 0.00031846 0.21704 0.00020867 0.54827 0.00052713 961.441389936693 965.447106270083 72.959 1.5782 72.959 72.106 73.685 7.6294E-06 714 133 9 0 0 0 2.97E-16 4 36816 106.6 80.326 1 0.6367 0.78851 0 167620000 103080000 64543000 1801 962 930 1031 2895;2896;2897;2898 2896 264 1688 EVSPLQPVNENMQVNK 16 1 0 Oxidation (M),Phospho (STY) _EVS(ph)PLQPVNENM(ox)QVNK_ EVSPLQPVNENM(1)QVNK EVS(1)PLQPVNENMQVNK EVSPLQPVNENM(41.38)QVNK EVS(41.38)PLQPVNENMQVNK 0 1 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 961.4405 2 961.439898 1920.86524 NaN NaN NaN 0.0087718 8.4336E-06 NaN NaN NaN NaN 74.314 1.5611 74.314 73.756 75.317 0 0 0 0 0.002461 1 47436 41.378 28.259 1 NaN NaN 0 64396000 64396000 0 1802 962 930 1031 2899 2899 264 1688 EVSSSFDHVIK 11 1 0 Unmodified _EVSSSFDHVIK_ 0 0 0 0 E9PIE4;Q53G34;Q9Y6C9 E9PIE4 E9PIE4 MTCH2 Mitochondrial carrier homolog 2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 624.3183 2 624.31696 1246.61937 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.899 1 93.899 93.399 94.399 0 0 0 0 0.003985 1 52447 58.676 26.455 1 1803 803 931 1032 2900 2900 EVTFVPGLYK 10 1 0 Unmodified _EVTFVPGLYK_ 0 0 0 0 P11388;J3KTB7;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 576.8193 2 576.818607 1151.62266 NaN NaN NaN 0.43775 0.0002525 NaN NaN NaN NaN 111.16 0.58965 111.16 110.86 111.45 7.6294E-06 0 0 0 0.0065928 2 65624 65.246 28.606 1 NaN NaN 0 7678600 7678600 0 1804 962;1032 932 1033 2901;2902 2901 EVTFVPGLYK 10 1 0 Unmodified _EVTFVPGLYK_ 0 0 0 0 P11388;J3KTB7;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 580.8264 2 576.818607 1151.62266 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.96 1 110.96 110.46 111.46 0 0 0 0 0.007562 1 65584 56.659 33.919 1 1805 962;1032 932 1033 2903 2903 EVVHTVSLHEIDVINSR 17 0 1 Unmodified _EVVHTVSLHEIDVINSR_ 0 0 0 0 M0R0Y3;B3KNL2;Q9Y230 M0R0Y3 M0R0Y3 RUVBL2 RuvB-like 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 490.0154 4 487.512811 1946.02214 87505.18 0.69655 0.00033958 -0.2004 -9.7697E-05 0.49615 0.00024188 487.512729706171 490.014758672401 101.58 0.24223 101.58 101.48 101.72 0 93 22 6 0 0 0 1.9499E-05 2 65325 57.52 48.266 1 1.2818 1.018 0 9612700 5285000 4327700 1806 585 933 1034 2904;2905 2904 EVVHTVSLHEIDVINSR 17 0 1 Unmodified _EVVHTVSLHEIDVINSR_ 0 0 0 0 M0R0Y3;B3KNL2;Q9Y230 M0R0Y3 M0R0Y3 RUVBL2 RuvB-like 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 649.6821 3 649.681323 1946.02214 76516.32 1.2249 0.00079578 -0.2787 -0.00018106 0.94618 0.00061471 649.681513023196 653.017177199189 101.6 0.28789 101.6 101.44 101.73 0 156 26 9 0 0 0 2.5817E-12 1 65348 93.152 93.152 1 1.162 0.8761 0 20142000 9435400 10706000 1807 585 933 1034 2906 2906 EVYELLDSPGK 11 1 0 Phospho (STY) _EVYELLDS(ph)PGK_ EVYELLDS(1)PGK EVY(-170.04)ELLDS(170.04)PGK 0 0 1 0 B4DGX3;E9PBS1;A0A024RD93;P22234 B4DGX3 B4DGX3 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 665.3027 2 665.302333 1328.59011 74260.47 1.1669 0.00077632 0.62463 0.00041557 1.7915 0.0011919 665.302356177075 669.310310701969 95.631 1.2793 95.631 94.897 96.176 0 479 113 6 0 0 0 8.9465E-103 3 53931 212.9 166.55 2 0.50902 0.63298 0 84167000 54409000 29757000 1808 224 934 1035 2907;2908;2909 2908 352 EVYELLDSPGK 11 1 0 Phospho (STY) _EVYELLDS(ph)PGK_ EVYELLDS(1)PGK EVY(-98.39)ELLDS(98.39)PGK 0 0 1 0 B4DGX3;E9PBS1;A0A024RD93;P22234 B4DGX3 B4DGX3 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 665.3033 2 665.302333 1328.59011 74339.13 1.1485 0.00076407 0.1273 8.469E-05 1.2758 0.00084876 665.302298174176 669.309519020428 99.285 1.2893 99.285 98.733 100.02 0 605 125 6 0 0 0 1.3946E-10 2 64135 123.95 92.763 2 0.98662 0.64778 0 31167000 16572000 14595000 1809 224 934 1035 2910;2911 2911 352 EVYMTPLR 8 0 1 Oxidation (M),Phospho (STY) _EVYM(ox)T(ph)PLR_ EVYM(1)TPLR EVY(0.021)MT(0.979)PLR EVYM(42.39)TPLR EVY(-16.66)MT(16.66)PLR 0 1 1 0 Q6NUR1;Q9BPX3 Q6NUR1 Q6NUR1 NCAPG Condensin complex subunit 3 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 552.7428 2 552.7434 1103.47225 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.183 1 60.183 59.683 60.683 0 0 0 0 0.01234 1 27269 42.395 21.023 2 1810 1119 935 1036 2912 2912 315 2950 EWYGYHFPELVK 12 1 0 Unmodified _EWYGYHFPELVK_ 0 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 523.5921 3 523.257515 1566.75072 82293.37 0.34054 0.00017819 0.19354 0.00010127 0.53408 0.00027946 523.591843797436 525.929020901349 145.37 0.19211 145.37 145.25 145.44 0 12 5 5 0 0 0 0.021143 1 83776 28.361 23.266 1 0.55628 0.6699 0 16331000 9851100 6480300 1811 504 936 1037 2913 2913 EYDSGDTDEIIAMK 14 1 0 Oxidation (M),Phospho (STY) _EYDS(ph)GDTDEIIAM(ox)K_ EYDSGDTDEIIAM(1)K EY(0.063)DS(0.924)GDT(0.014)DEIIAMK EYDSGDTDEIIAM(60.43)K EY(-11.69)DS(11.69)GDT(-18.22)DEIIAMK 0 1 1 0 A0A024R250;Q76FK4;B4DM91;F8WE42;Q6AI50;F5H101;A6H8Z4;F5GWN9 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 845.8359 2 841.828783 1681.64301 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.664 1 76.664 76.164 77.164 0 0 0 0 2.6156E-05 1 39774 60.434 51.475 3 1812 59 937 1038 2914 2914 14 75 EYFDDSTEER 10 0 1 Phospho (STY) _EYFDDS(ph)TEER_ EYFDDS(0.829)T(0.171)EER EY(-75.35)FDDS(6.85)T(-6.85)EER 0 0 1 0 Q8NEF9 Q8NEF9 Q8NEF9 SRFBP1 Serum response factor-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 690.7472 2 685.742837 1369.47112 74941.12 0.62656 0.00042966 0.2524 0.00017308 0.87896 0.00060274 685.742939402779 690.747041090207 57.458 1.3204 57.458 56.733 58.054 0 371 112 4 0 0 0 3.2736E-05 3 24895 92.866 84.456 3 0.78474 0.93532 0 16096000 8355300 7740400 1813 1160 938 1039 2915;2916;2917 2915 2238 EYFDDSTEER 10 0 1 Phospho (STY) _EYFDDS(ph)TEER_ EYFDDS(0.773)T(0.227)EER EY(-92.67)FDDS(5.32)T(-5.32)EER 0 0 1 0 Q8NEF9 Q8NEF9 Q8NEF9 SRFBP1 Serum response factor-binding protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 690.7487 2 685.742837 1369.47112 73753.99 1.1403 0.00078196 0.11687 8.0142E-05 1.2572 0.0008621 685.742819369468 690.747038090244 51.429 1.1092 51.429 50.936 52.045 0 469 99 7 0 0 0 5.0904E-06 2 31033 109.39 102.94 3 0.47447 0.33349 0 33386000 22287000 11099000 1814 1160 938 1039 2918;2919 2919 2238 EYIPGQPPLSQSSDSSPTR 19 0 1 Phospho (STY) _EYIPGQPPLSQSSDS(ph)SPTR_ EYIPGQPPLS(0.005)QS(0.02)S(0.02)DS(0.437)S(0.437)PT(0.081)R EY(-90.97)IPGQPPLS(-19.43)QS(-13.42)S(-13.42)DS(0)S(0)PT(-7.34)R 0 0 1 0 V9GYZ6;Q3KQZ8;B4DKX5;P07814 V9GYZ6 V9GYZ6 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1068.9825 2 1063.47552 2124.93649 59032.24 0.30832 0.00032789 0.88045 0.00093634 1.1888 0.0012642 1063.97956162277 1068.48009996786 86.726 1.2389 86.726 86.284 87.522 0 726 115 10 0 0 0 2.2322E-17 2 46941 95.767 79.776 7 3.5933 4.547 0 344650000 70185000 274470000 1815 634 939 1040 2920;2921 2920 1049;1050;1051 EYIPGQPPLSQSSDSSPTR 19 0 1 Phospho (STY) _EYIPGQPPLSQSS(ph)DSSPTR_ EYIPGQPPLS(0.075)QS(0.056)S(0.383)DS(0.216)S(0.216)PT(0.054)R EY(-70.18)IPGQPPLS(-7.1)QS(-8.31)S(2.48)DS(-2.48)S(-2.48)PT(-8.54)R 0 0 1 0 V9GYZ6;Q3KQZ8;B4DKX5;P07814 V9GYZ6 V9GYZ6 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1068.9836 2 1063.47552 2124.93649 58494.89 0.87284 0.00092825 0.80938 0.00086076 1.6822 0.001789 1063.97872782657 1068.4804635565 90.771 2.302 90.771 89.498 91.8 0 1105 219 10 0 0 0 1.1204E-09 2 58479 72.819 55.741 7 1.3411 0.88641 0 230490000 99166000 131320000 1816 634 939 1040 2922;2923 2922 1049;1050;1051 EYIPGQPPLSQSSDSSPTR 19 0 1 2 Phospho (STY) _EYIPGQPPLSQSS(ph)DS(ph)SPTR_ EYIPGQPPLS(0.3)QS(0.358)S(0.387)DS(0.46)S(0.42)PT(0.074)R EY(-31.71)IPGQPPLS(-1.3)QS(-0.44)S(0.44)DS(0.44)S(-0.44)PT(-8.41)R 0 0 2 0 V9GYZ6;Q3KQZ8;B4DKX5;P07814 V9GYZ6 V9GYZ6 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1108.9651 2 1103.45869 2204.90282 58732.11 0.59873 0.00066067 -1.004 -0.0011079 -0.40529 -0.00044723 1103.96042173208 1108.96225943147 94.735 0.83899 94.735 94.349 95.188 0 234 64 6 0 0 0 0.00029026 1 53377 40.962 23.681 21 1.6272 2.0498 0 55444000 16617000 38827000 1817 634 939 1041 2924 2924 1049;1050;1051 EYTINIHK 8 1 0 Unmodified _EYTINIHK_ 0 0 0 0 H7C2W9;C9JU56;B7Z4E3;B2R4C1;B7Z4C8;P62899;B8ZZK4 H7C2W9 H7C2W9 RPL31 60S ribosomal protein L31 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 509.2715 2 509.271824 1016.5291 85240.2 0.35585 0.00018122 0.14579 7.4245E-05 0.50164 0.00025547 509.27174562801 513.27899104222 81.888 1.2669 81.888 80.936 82.203 0 399 115 5 0 0 0 5.9606E-12 4 43635 147.69 103.43 1 0.78737 0.97528 0 154800000 88685000 66118000 1818 526 940 1042 2925;2926;2927;2928 2928 EYTINIHK 8 1 0 Unmodified _EYTINIHK_ 0 0 0 0 H7C2W9;C9JU56;B7Z4E3;B2R4C1;B7Z4C8;P62899;B8ZZK4 H7C2W9 H7C2W9 RPL31 60S ribosomal protein L31 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 509.2719 2 509.271824 1016.5291 84925.09 0.19532 9.9468E-05 0.11561 5.8876E-05 0.31092 0.00015834 509.271750099928 513.278934701853 82.75 2.2113 82.75 82.054 84.265 0 867 208 6 0 0 0 0.0058868 3 44148 100.07 79.511 1 0.8148 1.0084 0 222380000 121860000 100520000 1819 526 940 1042 2929;2930;2931 2930 FAAHISPAQGSPKPPPAASPGVR 23 1 1 3 Phospho (STY) _FAAHIS(ph)PAQGS(ph)PKPPPAAS(ph)PGVR_ FAAHIS(1)PAQGS(1)PKPPPAAS(1)PGVR FAAHIS(57.08)PAQGS(57.08)PKPPPAAS(57.08)PGVR 0 0 3 1 A0A024RCY3;B4DPL3;B0QYS6;B0QYS7;P19484;B1AKB1;B1AKB2;A0A1B0GXL9;B1AKB4 A0A024RCY3 A0A024RCY3 TFEB Transcription factor EB MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 827.7042 3 827.369002 2479.08518 67932.16 0.86045 0.00071191 0.068872 5.6983E-05 0.92933 0.0007689 827.703322484442 833.710917416869 81.941 0.89481 81.941 81.523 82.418 7.6294E-06 337 82 6 0 0 0 1.0804E-09 1 43609 57.078 51.048 1 0.82378 0.97052 0 43307000 20929000 22379000 1820 220 941 1043 2932 2932 342;343;344 FAAHISPAQGSPKPPPAASPGVR 23 1 1 2 Phospho (STY) _FAAHIS(ph)PAQGS(ph)PKPPPAASPGVR_ FAAHIS(1)PAQGS(0.999)PKPPPAAS(0.001)PGVR FAAHIS(41.54)PAQGS(31.55)PKPPPAAS(-31.55)PGVR 0 0 2 1 A0A024RCY3;B4DPL3;B0QYS6;B0QYS7;P19484;B1AKB1;B1AKB2;A0A1B0GXL9;B1AKB4 A0A024RCY3 A0A024RCY3 TFEB Transcription factor EB MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 807.0562 3 800.713558 2399.11885 67622.46 1.3022 0.0010427 -0.13795 -0.00011046 1.1643 0.00093227 801.047720133687 807.05536759085 78.89 1.4373 78.89 78.171 79.609 0 1079 135 10 0 0 0 6.2024E-08 1 50659 53.073 45 3 1.5003 1.158 0 94556000 38620000 55936000 1821 220 941 1044 2933 2933 342;343;344 FADQDDIGNVSFDR 14 0 1 Phospho (STY) _FADQDDIGNVS(ph)FDR_ FADQDDIGNVS(1)FDR FADQDDIGNVS(54.6)FDR 0 0 1 0 Q7L294;B4DTT7;B4DYU6;H0YEN2;E9PQP7;B4E0C2;A0A024R5F3;H7BXH2;E9PKF6;Q5H9R7 Q7L294 Q7L294 SAPS3;PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 844.8459 2 839.840874 1677.66719 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.9 1 95.9 95.4 96.4 0 0 0 0 7.886E-05 1 53961 54.598 42.683 1 1822 106 942 1045 2934 2934 142 FADQDDIGNVSFDR 14 0 1 Phospho (STY) _FADQDDIGNVS(ph)FDR_ FADQDDIGNVS(1)FDR FADQDDIGNVS(63.13)FDR 0 0 1 0 Q7L294;B4DTT7;B4DYU6;H0YEN2;E9PQP7;B4E0C2;A0A024R5F3;H7BXH2;E9PKF6;Q5H9R7 Q7L294 Q7L294 SAPS3;PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 839.8419 2 839.840874 1677.66719 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.054 1 96.054 95.554 96.554 0 0 0 0 4.0601E-06 1 54069 63.128 51.336 1 1823 106 942 1045 2935 2935 142 FALVAPVQAEEDSGNVNGK 19 1 0 Phospho (STY) _FALVAPVQAEEDS(ph)GNVNGK_ FALVAPVQAEEDS(1)GNVNGK FALVAPVQAEEDS(57.15)GNVNGK 0 0 1 0 O96028;Q05CW4;H0Y9L4 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1016.9751 2 1012.96988 2023.9252 60426.33 0.38135 0.0003863 0.66618 0.00067482 1.0475 0.0010611 1012.97028167816 1016.97742850587 108.55 0.7019 108.55 108.21 108.91 0 267 56 7 0 0 0 9.0841E-07 1 63819 57.148 45.125 1 0.67196 0.84956 0 45337000 28060000 17277000 1824 953 943 1046 2936 2936 1654 FALVAPVQAEEDSGNVNGK 19 1 0 Phospho (STY) _FALVAPVQAEEDS(ph)GNVNGK_ FALVAPVQAEEDS(1)GNVNGK FALVAPVQAEEDS(62.81)GNVNGK 0 0 1 0 O96028;Q05CW4;H0Y9L4 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1013.4735 2 1012.96988 2023.9252 NaN NaN NaN -0.056733 -5.7469E-05 NaN NaN NaN NaN 108.4 0.24467 108.4 108.18 108.43 0 0 0 0 5.742E-09 1 63497 62.813 33.322 1 NaN NaN 0 21130000 21130000 0 1825 953 943 1046 2937 2937 1654 FALVAPVQAEEDSGNVNGK 19 1 0 Phospho (STY) _FALVAPVQAEEDS(ph)GNVNGK_ FALVAPVQAEEDS(1)GNVNGK FALVAPVQAEEDS(80.61)GNVNGK 0 0 1 0 O96028;Q05CW4;H0Y9L4 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1016.9792 2 1012.96988 2023.9252 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.36 1 108.36 107.86 108.86 0 0 0 0 1.783E-10 1 63498 80.609 44.951 1 1826 953 943 1046 2938 2938 1654 FDSNEEDSASVFSPSFGLK 19 1 0 Phospho (STY) _FDSNEEDSASVFS(ph)PSFGLK_ FDSNEEDSASVFS(0.947)PS(0.053)FGLK FDS(-88.52)NEEDS(-61.1)AS(-44.68)VFS(12.51)PS(-12.51)FGLK 0 0 1 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1076.4553 2 1071.94881 2141.88306 59303.46 0.3165 0.00033927 -0.078669 -8.4329E-05 0.23783 0.00025494 1072.44979076561 1076.45626839611 122.82 1.0532 122.82 122.43 123.48 0 529 88 9 0 0 0 2.1145E-36 3 74199 121.26 108.39 5 0.81855 1.0209 0 70597000 38305000 32292000 1827 1032 944 1047 2939;2940;2941 2941 1863;1864;1865 FDSNEEDSASVFSPSFGLK 19 1 0 Phospho (STY) _FDS(ph)NEEDSASVFSPSFGLK_ FDS(0.883)NEEDS(0.104)AS(0.013)VFSPSFGLK FDS(9.3)NEEDS(-9.3)AS(-18.34)VFS(-40.98)PS(-44.22)FGLK 0 0 1 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1076.457 2 1071.94881 2141.88306 58654.91 0.49074 0.00052605 -1.4498 -0.0015541 -0.95901 -0.001028 1071.94713754447 1076.45577098957 124.83 0.76582 124.83 124.44 125.2 -7.6294E-06 432 72 8 0 0 0 8.0133E-05 1 75522 47.666 43.652 5 0.66032 0.83293 0 48443000 29805000 18638000 1828 1032 944 1047 2942 2942 1863;1864;1865 FDSNEEDSASVFSPSFGLK 19 1 0 2 Phospho (STY) _FDS(ph)NEEDSASVFS(ph)PSFGLK_ FDS(0.864)NEEDS(0.124)AS(0.014)VFS(0.946)PS(0.052)FGLK FDS(8.46)NEEDS(-8.46)AS(-18.64)VFS(12.66)PS(-12.66)FGLK 0 0 2 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1112.4333 2 1111.93197 2221.84939 59909.16 0.53061 0.00059001 0.039046 4.3417E-05 0.56966 0.00063342 1112.43338099801 1116.44066560366 129.51 0.63159 129.51 129.23 129.87 0 259 54 7 0 0 0 2.5917E-07 1 78682 61.276 56.099 10 0.65916 0.7819 0 9673800 6321900 3351900 1829 1032 944 1048 2943 2943 1863;1864;1865 FDSNEEDSASVFSPSFGLK 19 1 0 2 Phospho (STY) _FDS(ph)NEEDS(ph)ASVFSPSFGLK_ FDS(0.922)NEEDS(0.922)AS(0.152)VFS(0.003)PS(0.001)FGLK FDS(10.48)NEEDS(10.48)AS(-10.48)VFS(-29.19)PS(-35.52)FGLK 0 0 2 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1112.434 2 1111.93197 2221.84939 58870.2 0.59774 0.00066465 -0.058546 -6.5099E-05 0.53919 0.00059955 1112.43335805707 1115.93897275916 133.44 0.75714 133.44 132.84 133.6 0 231 51 10 0 0 0 3.6505E-05 1 80849 50.145 50.145 10 0.61878 0.76613 0 187740000 111380000 76355000 1830 1032 944 1048 2944 2944 1863;1864;1865 FDSNEEDSASVFSPSFGLK 19 1 0 2 Phospho (STY) _FDS(ph)NEEDS(ph)ASVFSPSFGLK_ FDS(1)NEEDS(0.882)AS(0.118)VFS(0.001)PSFGLK FDS(34.02)NEEDS(8.74)AS(-8.74)VFS(-31.12)PS(-37.93)FGLK 0 0 2 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1111.9331 2 1111.93197 2221.84939 NaN NaN NaN NaN NaN NaN NaN NaN NaN 132.88 1 132.88 132.38 133.38 0 0 0 0 0.00029019 1 80844 60.564 54.958 10 1831 1032 944 1048 2945 2945 1863;1864;1865 FEEESKEPVADEEEEDSDDDVEPITEFR 28 1 1 Phospho (STY) _FEEESKEPVADEEEEDS(ph)DDDVEPITEFR_ FEEES(0.001)KEPVADEEEEDS(0.999)DDDVEPITEFR FEEES(-29.86)KEPVADEEEEDS(29.86)DDDVEPIT(-35.29)EFR 0 0 1 1 E9PJF4;P54105 E9PJF4 E9PJF4 CLNS1A Methylosome subunit pICln MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1132.7927 3 1132.12251 3393.34571 56918.8 0.42225 0.00047804 -0.32588 -0.00036893 0.096377 0.00010911 1132.79062912404 1138.46421368366 106.29 0.84015 106.29 105.93 106.77 0 406 57 9 0 0 0 1.507E-20 2 61684 72.569 72.569 3 0.7124 0.84696 0 71391000 36646000 34744000 1832 806 945 1049 2946;2947 2946 1387 FEIHTPVSDK 10 1 0 2 Phospho (STY) _FEIHT(ph)PVS(ph)DK_ FEIHT(1)PVS(1)DK FEIHT(106.26)PVS(106.26)DK 0 0 2 0 B4DZG2;A0A024R8C1;Q15361 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 666.7673 2 666.767276 1331.52 75389.88 0.72533 0.00048363 -0.051122 -3.4087E-05 0.67421 0.00044954 666.767130642005 670.774354801333 71.928 1.4631 71.928 71.152 72.616 0 570 128 6 0 0 0 3.0415E-06 3 36052 106.26 90.671 1 0.83743 1.0389 0 113680000 61340000 52342000 1833 150 946 1050 2948;2949;2950 2949 228;2646 FESPEVAER 9 0 1 Phospho (STY) _FES(ph)PEVAER_ FES(1)PEVAER FES(121.9)PEVAER 0 0 1 0 Q6P2D7;Q7KYM9;Q59ES8;A0A087X0X3;P52272;Q8TCM5 Q6P2D7 Q6P2D7 HNRPM;ORF;HNRNPM;DKFZp547H118 Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 572.2414 2 572.239536 1142.46452 80432.97 0.30656 0.00017543 0.34317 0.00019637 0.64973 0.0003718 572.239720063915 577.243792371999 54.015 1.5002 54.015 53.345 54.846 3.8147E-06 610 117 8 0 0 0 4.2273E-06 4 23026 121.9 108.55 1 1.2478 1.5752 0 90053000 37381000 52672000 1834 271 947 1051 2951;2952;2953;2954 2954 430 FESPEVAER 9 0 1 Phospho (STY) _FES(ph)PEVAER_ FES(1)PEVAER FES(46.8)PEVAER 0 0 1 0 Q6P2D7;Q7KYM9;Q59ES8;A0A087X0X3;P52272;Q8TCM5 Q6P2D7 Q6P2D7 HNRPM;ORF;HNRNPM;DKFZp547H118 Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 577.2432 2 572.239536 1142.46452 72159.8 0.45223 0.00025878 4.3065 0.0024643 4.7587 0.0027231 572.241923549227 577.246233197165 46.057 1.117 46.057 45.52 46.637 -3.8147E-06 540 103 6 0 0 0 0.019162 1 27131 46.796 43.225 1 1.0351 0.70335 0 58336000 28185000 30151000 1835 271 947 1051 2955 2955 430 FFPGHESR 8 0 1 Unmodified _FFPGHESR_ 0 0 0 0 H3BSH7;Q969X6;H3BPD7;I3L4T9 H3BSH7 H3BSH7 CIRH1A Cirhin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 326.1593 3 326.159365 975.456264 107059.2 -0.28553 -9.3127E-05 0.3454 0.00011265 0.059871 1.9528E-05 326.159504392736 329.495474325267 79.114 1.345 79.114 78.372 79.717 7.6294E-06 309 121 4 0 0 0 0.008224 2 41305 47.198 36.324 1 0.83225 1.0416 0 40151000 23338000 16813000 1836 871 948 1052 2956;2957 2956 FFSPELK 7 1 0 Phospho (STY) _FFS(ph)PELK_ FFS(1)PELK FFS(76.1)PELK 0 0 1 0 B4DTN6;Q9ULJ3;Q5H9S0 B4DTN6 B4DTN6 ZBTB21;DKFZp781N1974 Zinc finger and BTB domain-containing protein 21 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 474.2175 2 474.217344 946.420135 89502.69 0.79997 0.00037936 -0.3284 -0.00015573 0.47157 0.00022363 474.217133779185 478.224189738633 110.09 1.196 110.09 109.57 110.76 -7.6294E-06 430 112 5 0 0 0 0.018692 1 71047 76.1 45.933 1 1.2091 0.93107 0 16396000 7586600 8809000 1837 661 949 1053 2958 2958 1101 FFSSQIPSSVNK 12 1 0 3 Phospho (STY) _FFSS(ph)QIPS(ph)S(ph)VNK_ FFS(0.444)S(0.557)QIPS(0.999)S(0.999)VNK FFS(-0.99)S(0.99)QIPS(29.02)S(29.02)VNK 0 0 3 0 B5MDQ0;Q2NKX8 B5MDQ0 B5MDQ0 ERCC6L DNA excision repair protein ERCC-6-like MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 790.7975 2 790.79538 1579.57621 70099.53 0.84916 0.00067151 0.059834 4.7317E-05 0.909 0.00071883 790.795372501264 794.802495920068 109.46 0.73138 109.46 109.12 109.86 -7.6294E-06 261 54 6 0 0 0 0.014009 1 64175 45.357 38.689 4 0.91852 1.163 0 43447000 20798000 22649000 1838 697 950 1054 2959 2959 1144;1145;1146;1147 FFSSQIPSSVNK 12 1 0 4 Phospho (STY) _FFS(ph)S(ph)QIPS(ph)S(ph)VNK_ FFS(1)S(1)QIPS(1)S(1)VNK FFS(41.62)S(41.62)QIPS(41.62)S(41.62)VNK 0 0 4 0 B5MDQ0;Q2NKX8 B5MDQ0 B5MDQ0 ERCC6L DNA excision repair protein ERCC-6-like MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 830.7783 2 830.778545 1659.54254 NaN NaN NaN NaN NaN NaN NaN NaN NaN 132.99 1 132.99 132.49 133.49 0 0 0 0 0.0057203 1 80907 41.621 33.089 1 1839 697 950 1055 2960 2960 1144;1145;1146;1147 FFTPSPDGR 9 0 1 2 Phospho (STY) _FFT(ph)PS(ph)PDGR_ FFT(1)PS(1)PDGR FFT(73.78)PS(73.78)PDGR 0 0 2 0 A5PKX7;Q92794;A5PLL3;B2RWN8;Q8WYB5 A5PKX7;B2RWN8 A5PKX7 MYST3;KAT6A;MYST4;KAT6B Histone acetyltransferase;Histone acetyltransferase KAT6A;Histone acetyltransferase KAT6B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 592.2147 2 592.214679 1182.41481 80428.38 0.79229 0.0004692 -0.063038 -3.7332E-05 0.72925 0.00043187 592.214625572233 597.218670854318 94.857 0.99191 94.857 94.29 95.282 0 165 78 4 0 0 0 0.00092094 1 53391 73.781 63.794 1 0.74397 0.9138 0 23005000 11284000 11721000 1840 423;564 951 1056 2961 2961 729;929;2723;2766 FFTPSPDGR 9 0 1 2 Phospho (STY) _FFT(ph)PS(ph)PDGR_ FFT(1)PS(1)PDGR FFT(54.47)PS(54.47)PDGR 0 0 2 0 A5PKX7;Q92794;A5PLL3;B2RWN8;Q8WYB5 A5PKX7;B2RWN8 A5PKX7 MYST3;KAT6A;MYST4;KAT6B Histone acetyltransferase;Histone acetyltransferase KAT6A;Histone acetyltransferase KAT6B MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 597.2192 2 592.214679 1182.41481 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.508 1 94.508 94.008 95.008 0 0 0 0 0.0064126 1 52916 54.471 36.335 1 1841 423;564 951 1056 2962 2962 729;929;2723;2766 FFTPSPDGR 9 0 1 2 Phospho (STY) _FFT(ph)PS(ph)PDGR_ FFT(1)PS(1)PDGR FFT(64.44)PS(64.44)PDGR 0 0 2 0 A5PKX7;Q92794;A5PLL3;B2RWN8;Q8WYB5 A5PKX7;B2RWN8 A5PKX7 MYST3;KAT6A;MYST4;KAT6B Histone acetyltransferase;Histone acetyltransferase KAT6A;Histone acetyltransferase KAT6B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 597.2191 2 592.214679 1182.41481 79854.97 0.99874 0.00059147 -0.11917 -7.0576E-05 0.87957 0.00052089 592.214606538327 597.21863236943 104.27 1.1321 104.27 103.67 104.8 0 271 110 5 0 0 0 0.004591 1 67171 64.439 60.692 1 1.9324 1.5375 0 12931000 5703700 7227300 1842 423;564 951 1056 2963 2963 729;929;2723;2766 FFTPSPDGR 9 0 1 Phospho (STY) _FFTPS(ph)PDGR_ FFT(0.038)PS(0.962)PDGR FFT(-14.04)PS(14.04)PDGR 0 0 1 0 A5PKX7;Q92794;A5PLL3;B2RWN8;Q8WYB5 A5PKX7;B2RWN8 A5PKX7 MYST3;KAT6A;MYST4;KAT6B Histone acetyltransferase;Histone acetyltransferase KAT6A;Histone acetyltransferase KAT6B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 557.236 2 552.231514 1102.44848 82182.73 0.89707 0.00049539 -0.28348 -0.00015655 0.61359 0.00033884 552.231358436061 557.235460663722 75.709 0.9834 75.709 75.277 76.26 0 184 83 5 0 0 0 0.029413 1 48613 40.715 34.274 2 2.6005 2.087 0 8263300 1788100 6475200 1843 423;564 951 1057 2964 2964 729;929;2723;2766 FFTPSPDGRK 10 1 1 2 Phospho (STY) _FFT(ph)PS(ph)PDGRK_ FFT(1)PS(1)PDGRK FFT(97.73)PS(97.73)PDGRK 0 0 2 1 A5PKX7;Q92794;A5PLL3 A5PKX7 A5PKX7 MYST3;KAT6A Histone acetyltransferase;Histone acetyltransferase KAT6A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 656.2623 2 656.262161 1310.50977 75209.14 0.87725 0.00057571 -0.01943 -1.2751E-05 0.85782 0.00056296 656.261998244885 665.273442334182 78.409 1.6655 78.409 77.565 79.231 0 505 147 5 0 0 0 4.5498E-06 2 41274 97.734 84.333 1 0.70571 0.83674 0 57921000 31190000 26731000 1844 423 952 1058 2965;2966 2966 729;2723 FFTPSPDGRK 10 1 1 2 Phospho (STY) _FFT(ph)PS(ph)PDGRK_ FFT(1)PS(1)PDGRK FFT(61.34)PS(61.34)PDGRK 0 0 2 1 A5PKX7;Q92794;A5PLL3 A5PKX7 A5PKX7 MYST3;KAT6A Histone acetyltransferase;Histone acetyltransferase KAT6A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 665.2744 2 656.262161 1310.50977 75434.03 1.1835 0.00077669 0.017355 1.1389E-05 1.2009 0.00078808 656.262029730144 665.273377254198 75.367 2.0253 75.367 74.422 76.447 -7.6294E-06 920 180 8 0 0 0 0.0024437 3 47953 61.344 55.342 1 1.6766 1.2932 0 62142000 23904000 38238000 1845 423 952 1058 2967;2968;2969 2968 729;2723 FFTPSPDGRR 10 0 2 2 Phospho (STY) _FFT(ph)PS(ph)PDGRR_ FFT(1)PS(1)PDGRR FFT(80.76)PS(80.76)PDGRR 0 0 2 1 B2RWN8;Q8WYB5 B2RWN8 B2RWN8 MYST4;KAT6B Histone acetyltransferase;Histone acetyltransferase KAT6B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 670.2653 2 670.265235 1338.51592 78143.39 0.82105 0.00055032 0.7133 0.0004781 1.5344 0.0010284 670.265179877116 680.274916530791 80.271 1.1264 80.271 79.533 80.66 0 225 104 4 0 0 0 0.00032945 1 42438 80.763 68.537 1 0.46009 0.56608 0 27488000 16404000 11084000 1846 564 953 1059 2970 2970 929;2766 FFTPSPDGRR 10 0 2 2 Phospho (STY) _FFT(ph)PS(ph)PDGRR_ FFT(1)PS(1)PDGRR FFT(62.47)PS(62.47)PDGRR 0 0 2 1 B2RWN8;Q8WYB5 B2RWN8 B2RWN8 MYST4;KAT6B Histone acetyltransferase;Histone acetyltransferase KAT6B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 680.2739 2 670.265235 1338.51592 74477.49 1.1422 0.00076561 0.026667 1.7874E-05 1.1689 0.00078348 670.265370394942 680.273324750573 77.599 1.7256 77.599 76.964 78.69 0 572 162 5 0 0 0 0.0023508 1 49876 62.466 53.603 1 2.6742 2.3072 0 22656000 6249000 16407000 1847 564 953 1059 2971 2971 929;2766 FFTSSTSLTLK 11 1 0 Phospho (STY) _FFTSS(ph)TSLTLK_ FFT(0.003)S(0.039)S(0.539)T(0.136)S(0.221)LT(0.062)LK FFT(-23.29)S(-11.39)S(3.87)T(-5.98)S(-3.87)LT(-9.41)LK 0 0 1 0 B7Z5I6;Q99567;B4DP20;J3KMX1;I3L245 B7Z5I6 B7Z5I6 NUP88 Nuclear pore complex protein Nup88 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 656.3153 2 656.315244 1310.61593 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.93 1 117.93 117.43 118.43 0 0 0 0 0.0031147 1 75999 54.023 44.973 6 1848 708 954 1060 2972 2972 1174 FGESEEVEMEVESDEEDDK 19 1 0 Oxidation (M),Phospho (STY) _FGESEEVEM(ox)EVES(ph)DEEDDK_ FGESEEVEM(1)EVESDEEDDK FGESEEVEMEVES(1)DEEDDK FGESEEVEM(66.98)EVESDEEDDK FGES(-36.44)EEVEMEVES(36.44)DEEDDK 0 1 1 0 H7C1L2;B4E091;A0A024R1K8;Q15459 H7C1L2 H7C1L2 SF3A1 Splicing factor 3A subunit 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1168.4258 2 1164.41707 2326.81959 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.449 1 78.449 77.949 78.949 0 0 0 0 2.8837E-06 1 41124 66.977 61.317 2 1849 47 955 1061 2973 2973 4 56 FGEYNSNMSPEEK 13 1 0 Oxidation (M),Phospho (STY) _FGEYNSNM(ox)S(ph)PEEK_ FGEYNSNM(1)SPEEK FGEY(0.002)NS(0.076)NMS(0.922)PEEK FGEYNSNM(47.77)SPEEK FGEY(-27.57)NS(-10.83)NMS(10.83)PEEK 0 1 1 0 E9PFK5;A8KA74;P78316 E9PFK5 E9PFK5 NOP14 Nucleolar protein 14 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 814.3047 2 814.302736 1626.59092 NaN NaN NaN -0.16673 -0.00013577 NaN NaN NaN NaN 47.075 1.0081 47.075 46.526 47.534 -3.8147E-06 0 0 0 0.0038063 1 17805 47.774 35.413 3 NaN NaN 0 8918400 8918400 0 1850 507 956 1062 2974 2974 130 871 FGEYNSNMSPEEK 13 1 0 Oxidation (M),Phospho (STY) _FGEYNSNM(ox)S(ph)PEEK_ FGEYNSNM(1)SPEEK FGEY(0.001)NS(0.016)NMS(0.983)PEEK FGEYNSNM(48.4)SPEEK FGEY(-30.6)NS(-17.85)NMS(17.85)PEEK 0 1 1 0 E9PFK5;A8KA74;P78316 E9PFK5 E9PFK5 NOP14 Nucleolar protein 14 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 814.806 2 814.302736 1626.59092 70073.88 0.88917 0.00072405 0.23345 0.0001901 1.1226 0.00091415 814.303042125327 818.309995741981 37.239 0.61007 37.239 36.988 37.598 -3.8147E-06 188 52 5 0 0 0 0.0051229 1 21177 48.405 48.405 3 0.93008 0.69117 0 8552300 4046800 4505500 1851 507 956 1062 2975 2975 130 871 FGGPVHHQAQR 11 0 1 Unmodified _FGGPVHHQAQR_ 0 0 0 0 Q15717 Q15717 Q15717 ELAVL1 ELAV-like protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 309.1611 4 309.161348 1232.61629 108744.8 -0.33867 -0.0001047 0.31806 9.8333E-05 -0.020609 -6.3714E-06 309.161429347549 311.663507982532 78.487 1.232 78.487 77.783 79.015 0 283 110 5 0 0 0 0.0023558 3 41161 50.353 42.133 1 1.9153 2.4028 0 41586000 15317000 26269000 1852 1073 957 1063 2976;2977;2978 2977 FGHGSDYSR 9 0 1 Unmodified _FGHGSDYSR_ 0 0 0 0 A0A024R5X3;Q9NWH9;H7C3F4;A0A024R5U7;H0YMM0 A0A024R5X3 A0A024R5X3 SLTM SAFB-like transcription modulator MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 342.4859 3 342.486029 1024.43626 105837.4 -0.31803 -0.00010892 0.21646 7.4136E-05 -0.10157 -3.4785E-05 342.486007324299 345.822254230019 65.775 0.29872 65.775 65.614 65.913 0 68 22 5 0 0 0 0.029487 1 31724 28.958 16.131 1 0.83299 0.99832 0 17380000 8512500 8867200 1853 114 958 1064 2979 2979 FGYVDFESAEDLEK 14 1 0 Unmodified _FGYVDFESAEDLEK_ 0 0 0 0 B3KM80;Q6ZS99;A0A024R4A0;P19338;B3KTP9 B3KM80 B3KM80 NCL Nucleolin MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 824.8742 2 824.872493 1647.73043 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.47 1 113.47 112.97 113.97 0 0 0 0 2.0399E-06 1 67420 65.842 48.406 1 1854 87 959 1065 2980 2980 FHEAQLSEK 9 1 0 Unmodified _FHEAQLSEK_ 0 0 0 0 E9PF10;B4DLT2;A0A024R071;O75694 E9PF10 E9PF10 NUP155 Nuclear pore complex protein Nup155 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 544.7719 2 544.772188 1087.52982 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.763 1 75.763 75.263 76.263 0 0 0 0 8.5842E-05 1 39094 91.265 54.245 1 1855 24 960 1066 2981 2981 FHEAQLSEK 9 1 0 Unmodified _FHEAQLSEK_ 0 0 0 0 E9PF10;B4DLT2;A0A024R071;O75694 E9PF10 E9PF10 NUP155 Nuclear pore complex protein Nup155 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 544.7724 2 544.772188 1087.52982 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.773 1 75.773 75.273 76.273 -7.6294E-06 0 0 0 0.00024539 1 39101 86.882 49.861 1 1856 24 960 1066 2982 2982 FHHTIGGSR 9 0 1 Unmodified _FHHTIGGSR_ 0 0 0 0 A0A024R2Q4;P61313;B4DLP4 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 341.1783 3 337.842147 1010.50461 103052.6 -0.23773 -8.0316E-05 0.55215 0.00018654 0.31442 0.00010623 337.842243161874 341.178424981883 89.083 1.9424 89.083 87.651 89.593 0 409 173 4 0 0 0 0.0084332 1 48844 46.001 36.787 1 0.90787 1.1307 0 37403000 16943000 20460000 1857 68 961 1067 2983 2983 FHHTIGGSR 9 0 1 Unmodified _FHHTIGGSR_ 0 0 0 0 A0A024R2Q4;P61313;B4DLP4 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 337.8423 3 337.842147 1010.50461 101536.2 0.064542 2.1805E-05 0.12505 4.2248E-05 0.18959 6.4053E-05 337.842177141008 341.178196152992 93.081 4.9055 93.081 90.152 95.058 0 1866 418 7 0 0 0 2.3178E-05 12 52406 96.668 83.089 1 0.8896 1.1259 0 375850000 207370000 168480000 1858 68 961 1067 2984;2985;2986;2987;2988;2989;2990;2991;2992;2993;2994;2995 2992 FHHTIGGSR 9 0 1 Unmodified _FHHTIGGSR_ 0 0 0 0 A0A024R2Q4;P61313;B4DLP4 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 337.8421 3 337.842147 1010.50461 103380.8 0.025887 8.7458E-06 0.4092 0.00013824 0.43509 0.00014699 337.842193644756 341.178292973928 95.443 1.4403 95.443 94.68 96.121 0 358 124 5 0 0 0 0.0029509 2 53722 62.558 52.852 1 0.9073 1.1426 0 53504000 30306000 23198000 1859 68 961 1067 2996;2997 2997 FHPIQGHR 8 0 1 Unmodified _FHPIQGHR_ 0 0 0 0 Q13151 Q13151 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 331.1785 3 331.178871 990.514782 105825.8 -0.63946 -0.00021178 0.35792 0.00011853 -0.28154 -9.3241E-05 331.178839996809 334.849483730129 92.136 0.93573 92.136 91.691 92.627 0 170 83 4 0 0 0 0.0036105 1 50979 67.032 60.137 1 0.99784 1.2268 0 28209000 18809000 9399400 1860 1049 962 1068 2998 2998 FHSIVR 6 0 1 Unmodified _FHSIVR_ 0 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 384.7235 2 379.71903 757.423508 NaN NaN NaN 0.38194 0.00014503 NaN NaN NaN NaN 93.293 1.1945 93.293 92.715 93.909 0 0 0 0 0.0036361 1 51983 66.994 26.631 1 NaN NaN 0 61175000 0 61175000 1861 504 963 1069 2999 2999 FHSIVR 6 0 1 Unmodified _FHSIVR_ 0 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 379.7198 2 379.71903 757.423508 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.336 1 93.336 92.836 93.836 0 0 0 0 0.0046375 1 51993 82.939 30.605 1 1862 504 963 1069 3000 3000 FHSPPDKDEAEAPSQK 16 2 0 Unmodified _FHSPPDKDEAEAPSQK_ 0 0 0 1 F5H8D7;B4DTD3;B2RCY5;A0A024R0S8;Q59HH7;P18887;M0QYS5;B4DEB2;M0QZ96;M0R0D2;M0R1U8 F5H8D7 F5H8D7 XRCC1 DNA repair protein XRCC1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 595.2819 3 594.947957 1781.82204 78800.95 0.71906 0.0004278 -0.28039 -0.00016682 0.43866 0.00026098 595.282119522607 600.290446497711 75.377 0.89413 75.377 74.877 75.771 0 347 76 7 0 0 0 9.4475E-09 3 38554 84.508 84.508 1 0.54153 0.6872 0 72289000 41193000 31096000 1863 33 964 1070 3001;3002;3003 3002 FHSPPDKDEAEAPSQK 16 2 0 Phospho (STY) _FHS(ph)PPDKDEAEAPSQK_ FHS(1)PPDKDEAEAPSQK FHS(38.58)PPDKDEAEAPS(-38.58)QK 0 0 1 1 F5H8D7;B4DTD3;B2RCY5;A0A024R0S8;Q59HH7;P18887;M0QYS5;B4DEB2;M0QZ96;M0R0D2;M0R1U8 F5H8D7 F5H8D7 XRCC1 DNA repair protein XRCC1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 621.9385 3 621.603401 1861.78837 NaN NaN NaN -0.1622 -0.00010082 NaN NaN NaN NaN 60.694 0.25201 60.694 60.549 60.801 0 0 0 0 0.00090598 2 27709 44.238 35.743 2 NaN NaN 0 10402000 10402000 0 1864 33 964 1071 3004;3005 3005 38 FHSPSTTWSPNK 12 1 0 2 Phospho (STY) _FHS(ph)PSTTWS(ph)PNK_ FHS(0.974)PS(0.232)T(0.196)T(0.166)WS(0.432)PNK FHS(18.16)PS(-2.74)T(-3.55)T(-4.33)WS(2.74)PNK 0 0 2 0 Q05BS8;A0A0A0MTP7;B4DZM2;B2RA91;F8VXG7;Q99590 Q05BS8 Q05BS8 SFRS2IP;SCAF11 Protein SCAF11 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 778.8068 2 774.799639 1547.58472 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.674 1 64.674 64.174 65.174 0 0 0 0 0.0017073 1 30865 53.754 43.109 10 1865 300 965 1072 3006 3006 476;477 FLDGIYVSEK 10 1 0 Unmodified _FLDGIYVSEK_ 0 0 0 0 H0Y9V9;Q53Z07;P32969;H0Y9R4;D6RAN4;Q2NKY6 H0Y9V9 H0Y9V9 RPL9 60S ribosomal protein L9 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 590.3152 2 585.805697 1169.59684 NaN NaN NaN -0.0072616 -4.2539E-06 NaN NaN NaN NaN 104.57 0.49026 104.57 104.31 104.8 0 0 0 0 0.019757 2 60514 56.432 31.537 1 NaN NaN 0 4262200 0 4262200 1866 854 966 1073 3007;3008 3008 FLEEFITPIVK 11 1 0 Unmodified _FLEEFITPIVK_ 0 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 672.3894 2 668.381571 1334.74859 76422.98 1.0151 0.00067849 -0.27103 -0.00018115 0.74409 0.00049734 668.381264398527 672.388468529195 134.47 0.22833 134.47 134.4 134.63 0 50 11 7 0 0 0 6.6147E-08 2 86769 103.7 75.958 1 1.3374 0.98958 0 8690900 3233800 5457100 1867 962 967 1074 3009;3010 3010 FLEQSMDIEDLK 12 1 0 Oxidation (M),Phospho (STY) _FLEQS(ph)M(ox)DIEDLK_ FLEQSM(1)DIEDLK FLEQS(1)MDIEDLK FLEQSM(110.77)DIEDLK FLEQS(110.77)MDIEDLK 0 1 1 0 Q59HG1;O95239;B3KNC0;Q2VIQ3;B4DYE2 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 786.3446 2 782.336047 1562.65754 68594.8 1.6683 0.0013052 0.084397 6.6027E-05 1.7527 0.0013712 782.336095981088 786.343508730418 99.94 1.5178 99.94 98.966 100.48 0 424 126 5 0 0 0 1.1698E-13 2 57013 110.77 97.819 1 1.0765 1.3461 0 64448000 35615000 28833000 1868 944 968 1075 3011;3012 3012 259 1630 FLESLPEEEQQR 12 0 1 Phospho (STY) _FLES(ph)LPEEEQQR_ FLES(1)LPEEEQQR FLES(101.72)LPEEEQQR 0 0 1 0 B4DNQ1;E9PKP7;A8K962;P17480;O00164;B4DLB0 B4DNQ1 B4DNQ1 UBTF Nucleolar transcription factor 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 793.3536 2 792.85071 1583.68687 NaN NaN NaN 0.21812 0.00017294 NaN NaN NaN NaN 95.57 0.8559 95.57 95.071 95.927 0 0 0 0 3.3583E-10 1 53550 101.72 80.418 1 NaN NaN 0 34974000 34974000 0 1869 501 969 1076 3013 3013 858 FLESLPEEEQQR 12 0 1 Phospho (STY) _FLES(ph)LPEEEQQR_ FLES(1)LPEEEQQR FLES(71.56)LPEEEQQR 0 0 1 0 B4DNQ1;E9PKP7;A8K962;P17480;O00164;B4DLB0 B4DNQ1 B4DNQ1 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 792.8516 2 792.85071 1583.68687 68440.01 1.1824 0.00093749 0.36721 0.00029115 1.5496 0.0012286 792.850726862353 797.854989630101 100.84 0.9955 100.84 100.35 101.35 0 310 94 6 0 0 0 0.0024297 1 64725 71.558 50.687 1 0.18583 0.14163 0 18460000 15843000 2617000 1870 501 969 1076 3014 3014 858 FLESPSR 7 0 1 Phospho (STY) _FLES(ph)PSR_ FLES(0.85)PS(0.15)R FLES(7.54)PS(-7.54)R 0 0 1 0 Q9ULM3;Q9H8R0 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 463.206 2 458.202225 914.389898 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.027 1 54.027 53.527 54.527 3.8147E-06 0 0 0 0.025427 1 22775 51.346 39.299 2 1871 1239 970 1077 3015 3015 2535 FLETDSEEEQEEVNEK 16 1 0 Phospho (STY) _FLETDS(ph)EEEQEEVNEK_ FLETDS(1)EEEQEEVNEK FLET(-41.82)DS(41.82)EEEQEEVNEK 0 0 1 0 A0A024R250;Q76FK4;B4DM91;F8WE42;Q6AI50;F5H101;A6H8Z4 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1018.4092 2 1017.9068 2033.79906 61426.38 -0.0081461 -8.2919E-06 0.38972 0.0003967 0.38158 0.00038841 1018.40880618669 1021.91412830612 68.726 1.2623 68.726 68.164 69.426 0 700 121 8 0 0 0 3.8349E-116 5 34271 202.63 166.44 2 1.4253 1.7668 0 125470000 47767000 77706000 1872 59 971 1078 3016;3017;3018;3019;3020 3018 76;2621 FLETDSEEEQEEVNEK 16 1 0 Phospho (STY) _FLETDS(ph)EEEQEEVNEK_ FLET(0.142)DS(0.858)EEEQEEVNEK FLET(-7.8)DS(7.8)EEEQEEVNEK 0 0 1 0 A0A024R250;Q76FK4;B4DM91;F8WE42;Q6AI50;F5H101;A6H8Z4 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1021.9154 2 1017.9068 2033.79906 59916.53 0.39682 0.00040392 0.58916 0.00059971 0.98598 0.0010036 1018.40893858149 1021.9146357956 70.222 1.6647 70.222 69.452 71.116 0 1066 144 12 0 0 0 0.00022533 1 44517 50.608 44.763 2 1.6867 1.1271 0 185450000 68296000 117150000 1873 59 971 1078 3021 3021 76;2621 FLETDSEEEQEEVNEK 16 1 0 2 Phospho (STY) _FLET(ph)DS(ph)EEEQEEVNEK_ FLET(1)DS(1)EEEQEEVNEK FLET(172.91)DS(172.91)EEEQEEVNEK 0 0 2 0 A0A024R250;Q76FK4;B4DM91;F8WE42;Q6AI50;F5H101;A6H8Z4 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1057.8894 2 1057.88997 2113.76539 59543.63 0.45276 0.00047897 0.067168 7.1056E-05 0.51992 0.00055002 1058.39160099999 1061.89737243751 75.42 1.3973 75.42 74.784 76.181 0 857 123 11 0 0 0 2.6987E-73 4 39060 172.91 143.96 1 0.82702 1.0232 0 260280000 135830000 124440000 1874 59 971 1079 3022;3023;3024;3025 3025 76;2621 FLETVELQISLK 12 1 0 Unmodified _FLETVELQISLK_ 0 0 0 0 P62906;Q1JQ76 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 714.416 2 710.408317 1418.80208 NaN NaN NaN NaN NaN NaN NaN NaN NaN 133.2 1 133.2 132.7 133.7 0 0 0 0 0.002841 1 81040 86.624 64.476 1 1875 1020 972 1080 3026 3026 FLLGPPQGGSPR 12 0 1 Phospho (STY) _FLLGPPQGGS(ph)PR_ FLLGPPQGGS(1)PR FLLGPPQGGS(79.47)PR 0 0 1 0 Q8IY92 Q8IY92 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 653.3212 2 653.321195 1304.62784 75320.01 1.3541 0.00088464 1.213 0.0007925 2.5671 0.0016771 653.32170844341 658.326603194488 103.04 1.2453 103.04 102.34 103.59 0 312 89 5 0 0 0 0.00091507 1 59293 79.466 59.137 1 0.95113 1.1699 0 25649000 11594000 14055000 1876 1148 973 1081 3027 3027 2201 FLLGPPQGGSPR 12 0 1 Phospho (STY) _FLLGPPQGGS(ph)PR_ FLLGPPQGGS(1)PR FLLGPPQGGS(49.42)PR 0 0 1 0 Q8IY92 Q8IY92 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 653.3223 2 653.321195 1304.62784 NaN NaN NaN -0.14929 -9.7536E-05 NaN NaN NaN NaN 106.28 1.0734 106.28 105.72 106.79 7.6294E-06 0 0 0 0.0079519 2 68616 49.423 19.614 1 NaN NaN 0 3493800 3493800 0 1877 1148 973 1081 3028;3029 3029 2201 FLRLSQSP 8 0 1 2 Phospho (STY) _FLRLS(ph)QS(ph)P_ FLRLS(1)QS(1)P FLRLS(46.82)QS(46.82)P 0 0 2 1 Q8NB80;A0A0B4J1Z1 Q8NB80 Q8NB80 SRSF7 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 554.2357 2 554.235415 1106.45628 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.434 1 99.434 98.934 99.934 0 0 0 0 0.0084147 1 56694 46.819 33.831 1 1878 308 974 1082 3030 3030 489;490 FLRLSQSP 8 0 1 2 Phospho (STY) _FLRLS(ph)QS(ph)P_ FLRLS(1)QS(1)P FLRLS(47.19)QS(47.19)P 0 0 2 1 Q8NB80;A0A0B4J1Z1 Q8NB80 Q8NB80 SRSF7 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 559.2411 2 554.235415 1106.45628 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.59 1 99.59 99.09 100.09 -7.6294E-06 0 0 0 0.0082777 1 56819 47.187 34.095 1 1879 308 974 1082 3031 3031 489;490 FLSESVLAVAGDEEVIR 17 0 1 Unmodified _FLSESVLAVAGDEEVIR_ 0 0 0 0 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 A0A0S2Z5C3 PAK1IP1 p21-activated protein kinase-interacting protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 917.9857 2 917.483273 1832.95199 69896.71 0.92222 0.00084612 0.14479 0.00013284 1.067 0.00097896 917.984764099641 922.487579627716 129.48 0.32178 129.48 129.31 129.64 0 95 28 6 0 0 0 0.010908 1 83639 34.179 29.001 1 1.548 1.2858 0 4914000 1541300 3372700 1880 359 975 1083 3032 3032 FLVHNVK 7 1 0 Unmodified _FLVHNVK_ 0 0 0 0 D3YTB1;A0A024R2G7;F8W727;P62910;A0A090N8E7 D3YTB1 D3YTB1 RPL32;LOC402318 60S ribosomal protein L32 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 432.7624 2 428.755613 855.496673 NaN NaN NaN -0.09464 -4.0577E-05 NaN NaN NaN NaN 86.574 0.88226 86.574 85.889 86.771 0 0 0 0 0.016872 1 47040 59.641 20.423 1 NaN NaN 0 13824000 0 13824000 1881 64 976 1084 3033 3033 FLYDDNQR 8 0 1 Unmodified _FLYDDNQR_ 0 0 0 0 P11388;Q71UH4;Q02880;Q59H80;B4DKD0;E9PCY5;Q6W6M6 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 535.7491 2 535.748713 1069.48287 81741.42 0.542 0.00029037 -0.13519 -7.2427E-05 0.40681 0.00021795 535.748654334647 540.75276554938 67.588 0.87616 67.588 67.168 68.044 0 259 75 6 0 0 0 0.0088517 1 33237 117.17 56.208 1 0.72155 0.91093 0 92967000 53315000 39652000 1882 962;1032 977 1085 3034 3034 FNDSEGDDTEETEDYR 16 0 1 Phospho (STY) _FNDS(ph)EGDDTEETEDYR_ FNDS(0.999)EGDDT(0.001)EETEDYR FNDS(31.23)EGDDT(-31.23)EET(-44.87)EDY(-57.22)R 0 0 1 0 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1001.35 2 1001.34711 2000.67967 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.26 1 51.26 50.76 51.76 0 0 0 0 6.9354E-05 1 20894 61.235 54.995 4 1883 809 978 1086 3035 3035 1395 FNECGHVLYADIK 13 1 0 Unmodified _FNECGHVLYADIK_ 0 0 0 0 Q6P2D7;Q7KYM9;Q59ES8;A0A087X0X3;P52272 Q6P2D7 Q6P2D7 HNRPM;ORF;HNRNPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 525.2581 3 522.585414 1564.73441 85185.43 0.70748 0.00036972 0.30223 0.00015794 1.0097 0.00052766 522.585993333684 525.257042101558 105.14 0.53952 105.14 104.8 105.34 0 94 37 4 0 0 0 0.0022243 1 60870 53.001 42.949 1 1.2869 1.5264 0 9279000 3569600 5709400 1884 271 979 1087 3036 3036 FNISSHNQSPK 11 1 0 Phospho (STY) _FNISSHNQS(ph)PK_ FNIS(0.011)S(0.136)HNQS(0.853)PK FNIS(-18.87)S(-7.97)HNQS(7.97)PK 0 0 1 0 Q9H1A4 Q9H1A4 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 673.8029 2 669.795541 1337.57653 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.723 1 59.723 59.223 60.223 0 0 0 0 0.0019579 1 26885 60.55 41.805 3 1885 1203 980 1088 3037 3037 2393 FNSLPQYSPVTFDR 14 0 1 Phospho (STY) _FNSLPQYS(ph)PVTFDR_ FNS(0.006)LPQY(0.198)S(0.764)PVT(0.032)FDR FNS(-21.07)LPQY(-5.87)S(5.87)PVT(-13.72)FDR 0 0 1 0 Q9H6G9;Q6ZNU6;Q9H6A7;D3DN56;C9JA69;A8K6U2;Q8WY36 Q9H6G9 Q9H6G9 BBX HMG box transcription factor BBX ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 876.3967 2 875.895452 1749.77635 NaN NaN NaN 0.21606 0.00018925 NaN NaN NaN NaN 111.37 0.43805 111.37 111.18 111.61 0 0 0 0 0.0040576 1 65908 45.79 32.653 4 NaN NaN 0 6731000 6731000 0 1886 484 981 1089 3038 3038 836 FPATSPLK 8 1 0 Phospho (STY) _FPATS(ph)PLK_ FPAT(0.247)S(0.753)PLK FPAT(-4.83)S(4.83)PLK 0 0 1 0 Q69YG3;H0YES2;Q9NXA5;B7Z5R5;Q5TB30 Q69YG3 Q69YG3 DKFZp434K0831;DEPDC1 DEP domain-containing protein 1A ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 470.7303 2 470.730619 939.446684 NaN NaN NaN 0.44198 0.00020805 NaN NaN NaN NaN 74.095 0.44884 74.095 73.74 74.189 0 0 0 0 0.028912 1 46823 42.338 15.291 2 NaN NaN 0 1760900 1760900 0 1887 709 982 1090 3039 3039 1177 FPATSPLK 8 1 0 Phospho (STY) _FPATS(ph)PLK_ FPAT(0.223)S(0.777)PLK FPAT(-5.42)S(5.42)PLK 0 0 1 0 Q69YG3;H0YES2;Q9NXA5;B7Z5R5;Q5TB30 Q69YG3 Q69YG3 DKFZp434K0831;DEPDC1 DEP domain-containing protein 1A MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 474.7379 2 470.730619 939.446684 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.58 1 73.58 73.08 74.08 0 0 0 0 0.010988 1 46702 53.124 22.326 2 1888 709 982 1090 3040 3040 1177 FPHSAHQK 8 1 0 Unmodified _FPHSAHQK_ 0 0 0 0 A8K7N0;Q6IPH7;P50914;E7EPB3;A0PJ62;B7Z6S8;A8K3Q9 A8K7N0 A8K7N0 RPL14 60S ribosomal protein L14 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 476.2436 2 476.243401 950.472249 86271.73 0.38586 0.00018376 0.19574 9.322E-05 0.5816 0.00027698 476.243314818087 480.250258916672 78.408 4.1161 78.408 75.822 79.938 0 1492 368 6 0 0 0 4.2338E-25 7 40563 163.84 132.78 1 0.92468 1.1448 0 195900000 99774000 96126000 1889 489 983 1091 3041;3042;3043;3044;3045;3046;3047 3044 FPHSAHQK 8 1 0 Unmodified _FPHSAHQK_ 0 0 0 0 A8K7N0;Q6IPH7;P50914;E7EPB3;A0PJ62;B7Z6S8;A8K3Q9 A8K7N0 A8K7N0 RPL14 60S ribosomal protein L14 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 317.8315 3 317.831359 950.472249 104855.1 -0.31612 -0.00010047 0.44387 0.00014107 0.12775 4.0603E-05 317.831444343759 320.502810738887 78.471 4.8152 78.471 75.446 80.261 0 1919 428 6 0 0 0 0.0098705 2 39670 43.808 35.875 1 0.93747 1.1592 0 343810000 174110000 169710000 1890 489 983 1091 3048;3049 3048 FPLTTESAMK 10 1 0 Oxidation (M),Phospho (STY) _FPLTT(ph)ESAM(ox)K_ FPLTTESAM(1)K FPLT(0.155)T(0.496)ES(0.349)AMK FPLTTESAM(67.21)K FPLT(-5.05)T(1.52)ES(-1.52)AMK 0 1 1 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 614.7752 2 610.767072 1219.51959 78661.09 0.50619 0.00030916 0.087945 5.3714E-05 0.59413 0.00036288 610.766997253397 614.77430512561 74.442 1.2518 74.442 73.787 75.039 0 213 108 4 0 0 0 0.0055123 1 37941 67.214 37.44 3 2.8327 3.5911 0 34678000 9850300 24828000 1891 511 984 1092 3050 3050 132 2755 FPSLLTHNENMVAK 14 1 0 Oxidation (M) _FPSLLTHNENM(ox)VAK_ FPSLLTHNENM(1)VAK FPSLLTHNENM(43.3)VAK 0 1 0 0 P62906;Q1JQ76;A0A024RCW3 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 539.6089 3 539.608219 1615.80283 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.21 1 104.21 103.71 104.71 0 0 0 0 0.001502 1 60303 43.297 30.097 1 1892 1020 985 1093 3051 3051 292 FQEQECPPSPEPTRK 15 1 1 Phospho (STY) _FQEQECPPS(ph)PEPTRK_ FQEQECPPS(0.995)PEPT(0.005)RK FQEQECPPS(22.85)PEPT(-22.85)RK 0 0 1 1 P62070 P62070 P62070 RRAS2 Ras-related protein R-Ras2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 637.2772 3 637.276519 1908.80773 NaN NaN NaN -0.37019 -0.00023591 NaN NaN NaN NaN 55.165 1.1788 55.165 54.688 55.866 0 0 0 0 5.3281E-09 1 23492 95.205 74.266 2 NaN NaN 0 33940000 33940000 0 1893 1014 986 1094 3052 3052 1847 FQEQECPPSPEPTRK 15 1 1 Phospho (STY) _FQEQECPPS(ph)PEPTRK_ FQEQECPPS(0.942)PEPT(0.058)RK FQEQECPPS(12.11)PEPT(-12.11)RK 0 0 1 1 P62070 P62070 P62070 RRAS2 Ras-related protein R-Ras2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 643.6188 3 637.276519 1908.80773 73798.07 1.1072 0.00070557 -0.8506 -0.00054207 0.25656 0.0001635 637.276399766511 643.283076643721 34.921 0.95103 34.921 34.535 35.486 0 500 74 8 0 0 0 0.00036105 1 19342 45.094 45.094 2 1.0696 0.82422 0 35975000 17356000 18619000 1894 1014 986 1094 3053 3053 1847 FQSEEQQQTEDELQDK 16 1 0 Phospho (STY) _FQS(ph)EEQQQTEDELQDK_ FQS(0.997)EEQQQT(0.003)EDELQDK FQS(25.74)EEQQQT(-25.74)EDELQDK 0 0 1 0 CON__P02666 CON__P02666 CON__P02666 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1031.9204 2 1031.41787 2060.82119 NaN NaN NaN 0.077205 7.963E-05 NaN NaN NaN NaN 48.097 0.42601 48.097 47.922 48.348 0 0 0 0 5.4239E-05 1 18793 55.546 46.817 2 NaN NaN 0 2650300 2650300 0 + 1895 753 987 1095 3054 3054 1265 FQSEEQQQTEDELQDK 16 1 0 Phospho (STY) _FQS(ph)EEQQQTEDELQDK_ FQS(1)EEQQQTEDELQDK FQS(149.42)EEQQQT(-149.42)EDELQDK 0 0 1 0 CON__P02666 CON__P02666 CON__P02666 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1031.9196 2 1031.41787 2060.82119 NaN NaN NaN -0.0072738 -7.5023E-06 NaN NaN NaN NaN 61.191 1.9544 61.191 60.488 62.442 0 0 0 0 0 1 28265 238.12 211.76 2 NaN NaN 0 110030000 110030000 0 + 1896 753 987 1095 3055 3055 1265 FQSEEQQQTEDELQDK 16 1 0 Phospho (STY) _FQS(ph)EEQQQTEDELQDK_ FQS(0.998)EEQQQT(0.002)EDELQDK FQS(27.63)EEQQQT(-27.63)EDELQDK 0 0 1 0 CON__P02666 CON__P02666 CON__P02666 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1031.4164 2 1031.41787 2060.82119 NaN NaN NaN NaN NaN NaN NaN NaN NaN 60.614 1 60.614 60.114 61.114 0 0 0 0 0.00019008 1 27643 57.175 43.017 2 + 1897 753 987 1095 3056 3056 1265 FQSEEQQQTEDELQDK 16 1 0 Phospho (STY) _FQS(ph)EEQQQTEDELQDK_ FQS(1)EEQQQTEDELQDK FQS(66.4)EEQQQT(-66.4)EDELQDK 0 0 1 0 CON__P02666 CON__P02666 CON__P02666 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1031.9203 2 1031.41787 2060.82119 NaN NaN NaN 0.58853 0.00060702 NaN NaN NaN NaN 61.252 1.7555 61.252 60.572 62.328 0 0 0 0 5.9718E-15 1 38169 96.208 69.843 2 NaN NaN 0 181200000 181200000 0 + 1898 753 987 1095 3057 3057 1265 FREDHPDLIQNAK 13 1 1 Unmodified _FREDHPDLIQNAK_ 0 0 0 1 B4DNQ1;E9PKP7;A8K962;P17480;O00164;Q05BZ1 B4DNQ1 B4DNQ1 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 528.6054 3 528.270595 1581.78995 83581.41 0.4894 0.00025854 -0.092265 -4.8741E-05 0.39714 0.0002098 528.270525997553 534.2779783329 110.48 1.6994 110.48 109.81 111.51 0 613 147 7 0 0 0 5.3277E-20 3 65505 134.61 117.95 1 0.63818 0.75691 0 59372000 42905000 16467000 1899 501 988 1096 3058;3059;3060 3060 FREDHPDLIQNAK 13 1 1 Unmodified _FREDHPDLIQNAK_ 0 0 0 1 B4DNQ1;E9PKP7;A8K962;P17480;O00164;Q05BZ1 B4DNQ1 B4DNQ1 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 528.2712 3 528.270595 1581.78995 83714.44 0.40302 0.0002129 0.33489 0.00017691 0.73791 0.00038982 528.270969992892 534.612330941912 111.63 0.65088 111.63 111.4 112.05 7.6294E-06 176 54 5 0 0 0 0.0014396 1 66144 74.769 67.887 1 0.52623 0.60123 0 23347000 17307000 6039600 1900 501 988 1096 3061 3061 FREDHPDLIQNAK 13 1 1 Unmodified _FREDHPDLIQNAK_ 0 0 0 1 B4DNQ1;E9PKP7;A8K962;P17480;O00164;Q05BZ1 B4DNQ1 B4DNQ1 UBTF Nucleolar transcription factor 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 534.278 3 528.270595 1581.78995 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.59 1 111.59 111.09 112.09 0 0 0 0 0.00068253 1 66068 86.467 67.144 1 1901 501 988 1096 3062 3062 FRPAGAAPRPPPK 13 1 2 Unmodified _FRPAGAAPRPPPK_ 0 0 0 2 A0A024RB14;P62854;Q5JNZ5 A0A024RB14 A0A024RB14 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 454.5983 3 454.598206 1360.77279 89290.29 0.21734 9.88E-05 -0.3412 -0.00015511 -0.12386 -5.6308E-05 454.597973670844 463.941587138573 86.078 2.6296 86.078 85.399 88.029 0 551 247 4 0 0 0 0.0019278 1 46424 49.243 38.633 1 0.45166 0.52253 0 58910000 36903000 22007000 1902 189 989 1097 3063 3063 FRPAGAAPRPPPKPM 15 1 2 Oxidation (M) _FRPAGAAPRPPPKPM(ox)_ FRPAGAAPRPPPKPM(1) FRPAGAAPRPPPKPM(41.62) 0 1 0 3 A0A024RB14;P62854;Q5JNZ5 A0A024RB14 A0A024RB14 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 402.2222 4 402.222514 1604.86095 93086.97 -0.17369 -6.9863E-05 0.14164 5.6969E-05 -0.032056 -1.2894E-05 402.222513768428 409.230403068255 86.576 0.39563 86.576 86.284 86.679 0 86 36 4 0 0 0 0.0022668 1 46911 41.621 36.906 1 0.58915 0.67592 0 36747000 16441000 20305000 1903 189 990 1098 3064 3064 45 FRPAGAAPRPPPKPM 15 1 2 Oxidation (M) _FRPAGAAPRPPPKPM(ox)_ FRPAGAAPRPPPKPM(1) FRPAGAAPRPPPKPM(73.93) 0 1 0 3 A0A024RB14;P62854;Q5JNZ5 A0A024RB14 A0A024RB14 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 545.639 3 535.960927 1604.86095 81138.52 0.48721 0.00026112 -0.64709 -0.00034682 -0.15988 -8.5692E-05 535.960794909557 545.303593478463 87.518 2.7076 87.518 86.284 88.991 0 706 248 4 0 0 0 1.3196E-05 4 47262 73.927 67.49 1 0.64467 0.74884 0 74066000 40496000 33570000 1904 189 990 1098 3065;3066;3067;3068 3065 45 FRPAGAAPRPPPKPM 15 1 2 Oxidation (M) _FRPAGAAPRPPPKPM(ox)_ FRPAGAAPRPPPKPM(1) FRPAGAAPRPPPKPM(46.48) 0 1 0 3 A0A024RB14;P62854;Q5JNZ5 A0A024RB14 A0A024RB14 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 535.9609 3 535.960927 1604.86095 NaN NaN NaN -0.44817 -0.0002402 NaN NaN NaN NaN 86.139 1.2675 86.139 85.381 86.649 0 0 0 0 0.00080998 1 46618 46.481 33.92 1 NaN NaN 0 30877000 30877000 0 1905 189 990 1098 3069 3069 45 FRPAGAAPRPPPKPM 15 1 2 Oxidation (M) _FRPAGAAPRPPPKPM(ox)_ FRPAGAAPRPPPKPM(1) FRPAGAAPRPPPKPM(40.94) 0 1 0 3 A0A024RB14;P62854;Q5JNZ5 A0A024RB14 A0A024RB14 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 402.222 4 402.222514 1604.86095 NaN NaN NaN 0.28901 0.00011624 NaN NaN NaN NaN 87.055 0.81293 87.055 86.902 87.715 0 0 0 0 0.012775 1 47454 40.941 29.149 1 NaN NaN 0 22962000 22962000 0 1906 189 990 1098 3070 3070 45 FSETHADPHNSR 12 0 1 Unmodified _FSETHADPHNSR_ 0 0 0 0 Q59GX7;O00767 Q59GX7 Q59GX7 SCD Acyl-CoA desaturase MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 470.2137 3 466.544606 1396.61199 89438.24 0.087499 4.0822E-05 0.09428 4.3986E-05 0.18178 8.4808E-05 466.544724558083 469.880851980198 67.038 0.40523 67.038 66.871 67.277 0 126 32 6 0 0 0 0.016721 1 32801 25.718 18.173 1 1.0064 1.2559 0 38540000 18985000 19555000 1907 918 991 1099 3071 3071 FSFYGNLSPR 10 0 1 Phospho (STY) _FSFYGNLS(ph)PR_ FSFY(0.006)GNLS(0.994)PR FS(-40.4)FY(-22.14)GNLS(22.14)PR 0 0 1 0 A7E2F9;Q9P2F8 A7E2F9 A7E2F9 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 639.2831 2 634.278996 1266.54344 NaN NaN NaN -0.22706 -0.00014402 NaN NaN NaN NaN 115.31 0.756 115.31 114.99 115.75 -7.6294E-06 0 0 0 0.014616 1 74197 51.612 36.41 3 NaN NaN 0 3750300 0 3750300 1908 435 992 1100 3072 3072 757 FSGEEGEIEDDESGTENREEK 21 1 1 Phospho (STY) _FSGEEGEIEDDES(ph)GTENREEK_ FSGEEGEIEDDES(0.806)GT(0.194)ENREEK FS(-156.77)GEEGEIEDDES(6.19)GT(-6.19)ENREEK 0 0 1 1 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 822.9882 3 822.653654 2464.93913 66558.58 0.77478 0.00063737 0.01489 1.2249E-05 0.78967 0.00064962 822.987935997286 828.661220106411 59.097 1.2363 59.097 58.524 59.761 3.8147E-06 831 100 11 0 0 0 2.9792E-100 2 26187 173.86 164.28 3 1.0781 1.2995 0 205860000 101010000 104850000 1909 1248 993 1101 3073;3074 3074 2565 FSGEEGEIEDDESGTENREEK 21 1 1 Phospho (STY) _FSGEEGEIEDDES(ph)GTENREEK_ FSGEEGEIEDDES(0.96)GT(0.04)ENREEK FS(-127.06)GEEGEIEDDES(13.75)GT(-13.75)ENREEK 0 0 1 1 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 828.9967 3 822.653654 2464.93913 67119.27 0.98383 0.00080935 0.42348 0.00034838 1.4073 0.0011577 822.988207997189 828.995649363934 43.774 2.1566 43.774 42.702 44.859 0 1391 196 10 0 0 0 1.5837E-67 1 26017 144.18 135.14 3 1.4016 1.0816 0 83447000 34863000 48585000 1910 1248 993 1101 3075 3075 2565 FSGGFGAR 8 0 1 Phospho (STY) _FS(ph)GGFGAR_ FS(1)GGFGAR FS(59.6)GGFGAR 0 0 1 0 A0A0D9SFB3;A0A0D9SG12;A0A024R9A4;B5BTY4;Q59GX6;A0A0D9SF53;O15523;O00571;Q5S4N1;B4E132;B4DLU5;A0A087WVZ1;A0A0J9YVQ7 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3Y;ATP-dependent RNA helicase DDX3X MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 439.6814 2 439.68146 877.348367 93254.67 0.05102 2.2432E-05 0.12019 5.2844E-05 0.17121 7.5277E-05 439.6814205624 444.685538050869 61.646 1.28 61.646 60.95 62.23 0 271 89 4 0 0 0 0.013111 1 28652 59.597 40.393 1 1.1851 1.4315 0 19127000 9228600 9898900 1911 160 994 1102 3076 3076 251 FSIAPSSLDPSNR 13 0 1 Phospho (STY) _FSIAPS(ph)SLDPSNR_ FSIAPS(0.488)S(0.488)LDPS(0.023)NR FS(-49.32)IAPS(0)S(0)LDPS(-13.2)NR 0 0 1 0 B4E083;Q59GD0;B2R841;P53350;I3L2H5;D3DWF3 B4E083 B4E083 PLK1 Serine/threonine-protein kinase PLK;Serine/threonine-protein kinase PLK1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 741.3415 2 735.834863 1469.65517 NaN NaN NaN -2.5312 -0.0018625 NaN NaN NaN NaN 102.6 0.49434 102.6 102.39 102.88 0 0 0 0 0.0010861 1 59115 61.11 40.27 4 NaN NaN 0 3352400 0 3352400 1912 540 995 1103 3077 3077 897;898 FSISAHGK 8 1 0 Unmodified _FSISAHGK_ 0 0 0 0 Q5STZ8;B4DNU2;Q8NE71;Q2L6I2;Q59F96;H0YGW7 Q5STZ8 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 423.7271 2 423.727052 845.439552 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.241 1 77.241 76.741 77.741 0 0 0 0 0.019204 1 40225 57.177 12.456 1 1913 648 996 1104 3078 3078 FSPELTVR 8 0 1 Phospho (STY) _FS(ph)PELTVR_ FS(1)PELTVR FS(44.9)PELT(-44.9)VR 0 0 1 0 A5PKX7;Q92794;A5PLL3 A5PKX7 A5PKX7 MYST3;KAT6A Histone acetyltransferase;Histone acetyltransferase KAT6A ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 519.748 2 514.744257 1027.47396 NaN NaN NaN 0.047417 2.4408E-05 NaN NaN NaN NaN 93.898 0.77813 93.898 93.421 94.199 0 0 0 0 0.014788 1 60336 52.278 37.612 2 NaN NaN 0 8170100 0 8170100 1914 423 997 1105 3079 3079 730 FSSSIENSDSPVR 13 0 1 Phospho (STY) _FSSSIENSDS(ph)PVR_ FSSSIENS(0.01)DS(0.99)PVR FS(-122.34)S(-97.3)S(-87.4)IENS(-20.03)DS(20.03)PVR 0 0 1 0 O95425 O95425 O95425 SVIL Supervillin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 757.8243 2 752.81941 1503.62427 70596.77 0.76093 0.00057284 -0.39631 -0.00029835 0.36463 0.0002745 752.818999618608 757.823423761363 62.017 1.3067 62.017 61.571 62.878 0 340 94 6 0 0 0 1.6332E-53 3 28536 171.76 143.04 5 3.0422 3.7393 0 29556000 6625900 22930000 1915 948 998 1106 3080;3081;3082 3080 1641;1642 FSSSIENSDSPVR 13 0 1 Phospho (STY) _FSSSIENS(ph)DSPVR_ FSSSIENS(0.753)DS(0.247)PVR FS(-100.09)S(-79.35)S(-68.73)IENS(4.83)DS(-4.83)PVR 0 0 1 0 O95425 O95425 O95425 SVIL Supervillin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 757.8242 2 752.81941 1503.62427 70293.24 1.1101 0.00083574 0.4114 0.00030971 1.5215 0.0011454 752.818899725289 757.823852990406 58.026 1.6134 58.026 57.231 58.845 3.8147E-06 543 147 7 0 0 0 3.4976E-16 4 35349 119.87 103.09 5 8.9863 6.1093 0 56844000 7549500 49294000 1916 948 998 1106 3083;3084;3085;3086 3084 1641;1642 FSSSSGYGGGSSR 13 0 1 Unmodified _FSSSSGYGGGSSR_ 0 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 618.2676 2 618.267998 1234.52144 NaN NaN NaN -0.050606 -3.1288E-05 NaN NaN NaN NaN 44.224 0.88282 44.224 43.749 44.631 0 0 0 0 0.002537 1 16170 56.404 27.255 1 NaN NaN 0 1958500 1958500 0 + 1917 757 999 1107 3087 3087 FSVCVLGDQQHCDEAK 16 1 0 Unmodified _FSVCVLGDQQHCDEAK_ 0 0 0 0 P62906;Q1JQ76 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 634.2851 3 631.613704 1891.81928 78088.42 0.7417 0.00046847 -0.6382 -0.0004031 0.1035 6.537E-05 631.613386186817 634.284797778146 98.382 0.33642 98.382 98.146 98.483 0 125 29 7 0 0 0 5.1874E-05 1 55764 57.148 46.294 1 0.7463 0.94229 0 30825000 17528000 13297000 1918 1020 1000 1108 3088 3088 FSVCVLGDQQHCDEAK 16 1 0 Unmodified _FSVCVLGDQQHCDEAK_ 0 0 0 0 P62906;Q1JQ76 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 631.9462 3 631.613704 1891.81928 78239.25 0.64557 0.00040775 -0.82224 -0.00051934 -0.17667 -0.00011159 631.613085756244 634.619016907848 98.64 0.59354 98.64 98.458 99.052 0 142 45 5 0 0 0 8.2216E-06 2 56308 71.08 59.801 1 0.79529 0.97597 0 21377000 12621000 8756000 1919 1020 1000 1108 3089;3090 3089 FSVSPVVR 8 0 1 Phospho (STY) _FSVS(ph)PVVR_ FSVS(1)PVVR FS(-45.7)VS(45.7)PVVR 0 0 1 0 P13639;Q8TA90;Q6PK56 P13639 P13639 EEF2 Elongation factor 2 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 490.7455 2 485.741518 969.468482 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.684 1 94.684 94.184 95.184 -7.6294E-06 0 0 0 0.011381 1 60965 68.847 38.235 2 1920 964 1001 1109 3091 3091 1709 FTMDLDSDEDFSDFDEK 17 1 0 Oxidation (M),Phospho (STY) _FTM(ox)DLDS(ph)DEDFSDFDEK_ FTM(1)DLDSDEDFSDFDEK FTMDLDS(0.998)DEDFS(0.002)DFDEK FTM(113.47)DLDSDEDFSDFDEK FT(-50.55)MDLDS(27.98)DEDFS(-27.98)DFDEK 0 1 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1080.3921 2 1076.38485 2150.75514 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.32 1 108.32 107.82 108.82 0 0 0 0 8.3364E-09 1 63467 113.47 100.3 3 1921 962 1002 1110 3092 3092 265 1689 FTMDLDSDEDFSDFDEK 17 1 0 Phospho (STY) _FTMDLDS(ph)DEDFSDFDEK_ FTMDLDS(0.998)DEDFS(0.001)DFDEK FT(-33.65)MDLDS(29.63)DEDFS(-29.63)DFDEK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1072.8975 2 1068.38739 2134.76023 NaN NaN NaN 0.094411 0.00010087 NaN NaN NaN NaN 130.8 1.5654 130.8 130.39 131.96 0 0 0 0 8.924E-07 1 84289 72.446 55.762 3 NaN NaN 0 318580000 0 318580000 1922 962 1002 1111 3093 3093 1689 FTPSEAHSR 9 0 1 Unmodified _FTPSEAHSR_ 0 0 0 0 Q03164;E9PR05 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 344.5013 3 344.501679 1030.48321 105288.8 -0.21996 -7.5775E-05 -0.11257 -3.8782E-05 -0.33253 -0.00011456 344.501630431329 347.83753635823 61.604 0.28645 61.604 61.446 61.733 0 60 18 4 0 0 0 0.016932 1 28416 35.541 21.772 1 1.0141 1.1535 0 11169000 5490300 5679100 1923 1034 1003 1112 3094 3094 FTQQNYHDR 9 0 1 Unmodified _FTQQNYHDR_ 0 0 0 0 Q53GS0;D2CFK9;Q9BZE4;Q8N4P8;O60747;Q5T3R7 Q53GS0 Q53GS0 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 403.5197 3 403.519621 1207.53703 93750.07 -0.077014 -3.1077E-05 0.20669 8.3402E-05 0.12967 5.2325E-05 403.519729607031 406.855723150711 60.452 0.8123 60.452 60.035 60.847 -3.8147E-06 334 57 10 0 0 0 0.0092167 2 27252 44.318 35.313 1 1.217 1.5385 0 202070000 87851000 114210000 1924 762 1004 1113 3095;3096 3095 FTQQNYHDR 9 0 1 Unmodified _FTQQNYHDR_ 0 0 0 0 Q53GS0;D2CFK9;Q9BZE4;Q8N4P8;O60747;Q5T3R7 Q53GS0 Q53GS0 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 604.7756 2 604.775793 1207.53703 78467.92 0.82259 0.00049748 -0.26218 -0.00015856 0.56041 0.00033892 604.775714171587 609.779933278668 60.452 0.57729 60.453 60.196 60.773 3.8147E-06 151 40 6 0 0 0 0.00028571 1 27454 110.88 98.646 1 1.3749 1.7027 0 34472000 16872000 17601000 1925 762 1004 1113 3097 3097 FTQTSGETTDADKEPAGEDK 20 2 0 Unmodified _FTQTSGETTDADKEPAGEDK_ 0 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 709.9852 3 709.650194 2125.92875 72241.1 0.48486 0.00034408 0.13807 9.7983E-05 0.62294 0.00044207 709.650286391747 714.99322504371 52.854 1.7967 52.854 51.962 53.759 3.8147E-06 1090 145 11 0 0 0 1.1329E-46 3 22080 134.06 119.13 1 2.2924 2.8928 0 59230000 19411000 39819000 1926 994 1005 1114 3098;3099;3100 3100 FTQTSGETTDADKEPAGEDK 20 2 0 Phospho (STY) _FTQTS(ph)GETTDADKEPAGEDK_ FTQT(0.027)S(0.92)GET(0.042)T(0.01)DADKEPAGEDK FT(-37.98)QT(-15.25)S(13.44)GET(-13.44)T(-19.44)DADKEPAGEDK 0 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1104.458 2 1103.95482 2205.89508 57560.17 0.7046 0.00077784 1.0313 0.0011385 1.7359 0.0019163 1104.45676939695 1112.47255304163 26.041 0.3522 26.041 25.893 26.245 1.9073E-06 100 19 8 0 0 0 9.9179E-23 1 12174 107.72 95.363 5 1.2127 0.95871 0 33069000 17862000 15206000 1927 994 1005 1115 3101 3101 1776 FTQTSGETTDADKEPAGEDK 20 2 0 Phospho (STY) _FTQTS(ph)GETTDADKEPAGEDK_ FT(0.021)QT(0.191)S(0.666)GET(0.085)T(0.036)DADKEPAGEDK FT(-14.97)QT(-5.42)S(5.42)GET(-8.95)T(-12.64)DADKEPAGEDK 0 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 736.6409 3 736.305637 2205.89508 NaN NaN NaN -0.19237 -0.00014165 NaN NaN NaN NaN 26.036 0.27801 26.036 25.907 26.185 0 0 0 0 0.0003469 1 12188 42.708 29.636 5 NaN NaN 0 13209000 13209000 0 1928 994 1005 1115 3102 3102 1776 FTVETASR 8 0 1 Unmodified _FTVETASR_ 0 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 460.7392 2 455.735074 909.455596 90238.79 0.36805 0.00016773 0.47709 0.00021743 0.84514 0.00038516 455.735109488092 460.739120228239 60.723 0.7831 60.723 60.385 61.168 0 224 54 7 0 0 0 0.017878 2 27639 89.752 34.966 1 0.74784 0.91918 0 29804000 17586000 12218000 1929 962 1006 1116 3103;3104 3103 FTVETASR 8 0 1 Unmodified _FTVETASR_ 0 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 455.7351 2 455.735074 909.455596 90311.74 0.48099 0.0002192 0.16934 7.7176E-05 0.65033 0.00029638 455.735147280057 460.739216693272 32.865 0.45318 32.865 32.69 33.143 0 111 34 5 0 0 0 0.020265 1 17801 77.282 26.317 1 1.3489 1.0752 0 9127000 3935100 5191800 1930 962 1006 1116 3105 3105 FTVQMPTSQSPAVK 14 1 0 Oxidation (M),Phospho (STY) _FTVQM(ox)PT(ph)SQSPAVK_ FTVQM(1)PTSQSPAVK FTVQMPT(0.597)S(0.281)QS(0.123)PAVK FTVQM(71.55)PTSQSPAVK FT(-52.34)VQMPT(3.27)S(-3.27)QS(-6.87)PAVK 0 1 1 0 Q16594 Q16594 Q16594 TAF9 Transcription initiation factor TFIID subunit 9 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 808.874 2 808.873131 1615.73171 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.156 1 72.156 71.656 72.656 0 0 0 0 1.3256E-07 1 36411 71.548 34.122 4 1931 1080 1007 1117 3106 3106 310 2933 FVQETELSQR 10 0 1 Phospho (STY) _FVQETELS(ph)QR_ FVQETELS(1)QR FVQET(-52.47)ELS(52.47)QR 0 0 1 0 A0A0A6YYG7;Q6IBW4;H0YC55 A0A0A6YYG7 A0A0A6YYG7 NCAPH2 Condensin-2 complex subunit H2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 663.8023 2 658.797749 1315.58095 74731.24 0.89551 0.00058996 -0.035036 -2.3082E-05 0.86047 0.00056688 658.797728367917 663.801787026 59.956 1.4151 59.956 59.284 60.699 3.8147E-06 612 104 9 0 0 0 1.8251E-15 4 27249 145.09 130.83 2 0.81174 1.0258 0 160060000 90093000 69972000 1932 301 1008 1118 3107;3108;3109;3110 3110 484 FVQETELSQR 10 0 1 Phospho (STY) _FVQETELS(ph)QR_ FVQETELS(1)QR FVQET(-70.47)ELS(70.47)QR 0 0 1 0 A0A0A6YYG7;Q6IBW4;H0YC55 A0A0A6YYG7 A0A0A6YYG7 NCAPH2 Condensin-2 complex subunit H2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 663.8025 2 658.797749 1315.58095 74159.29 1.2002 0.00079066 -0.077118 -5.0805E-05 1.123 0.00073986 658.797492060363 663.801929641429 54.12 2.4083 54.12 53.298 55.706 -3.8147E-06 832 203 7 0 0 0 6.959E-66 3 33155 192.15 165.49 2 1.8186 1.2247 0 91022000 30544000 60477000 1933 301 1008 1118 3111;3112;3113 3113 484 FYEEVHDLER 10 0 1 Unmodified _FYEEVHDLER_ 0 0 0 0 F8VRJ2;B7Z5H0;H0YHC3;F8W020;F8W118;F8VXI6;F8VUX1;F8VY35;F8VV59;B7Z9C2;A0A024RBE6;F8W0J6;F5H4R6;B7Z2V4;H0YIV4;A0A024RBB7;P55209;E9PNW0;E9PJJ2;E9PS34;E9PNJ7;A8MXH2;F8VVB5;E9PKT8;H0YH88;C9J6D1;C9JZI7;F8W543;A0A024RCC9;B7ZAK9;B7ZB83;B7ZAC7;B4DS05;Q99733 F8VRJ2 F8VRJ2 NAP1L1;NAP1L4 Nucleosome assembly protein 1-like 1;Nucleosome assembly protein 1-like 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 446.211 3 446.210453 1335.60953 91416.15 0.30928 0.00013801 0.25933 0.00011572 0.56861 0.00025372 446.210458939146 449.546668586835 94.763 0.85173 94.763 94.206 95.058 0 191 65 5 0 0 0 0.0062146 1 52787 47.559 39.992 1 1.0625 1.3368 0 46654000 24507000 22147000 1934 194 1009 1119 3114 3114 FYEEVHDLER 10 0 1 Unmodified _FYEEVHDLER_ 0 0 0 0 F8VRJ2;B7Z5H0;H0YHC3;F8W020;F8W118;F8VXI6;F8VUX1;F8VY35;F8VV59;B7Z9C2;A0A024RBE6;F8W0J6;F5H4R6;B7Z2V4;H0YIV4;A0A024RBB7;P55209;E9PNW0;E9PJJ2;E9PS34;E9PNJ7;A8MXH2;F8VVB5;E9PKT8;H0YH88;C9J6D1;C9JZI7;F8W543;A0A024RCC9;B7ZAK9;B7ZB83;B7ZAC7;B4DS05;Q99733 F8VRJ2 F8VRJ2 NAP1L1;NAP1L4 Nucleosome assembly protein 1-like 1;Nucleosome assembly protein 1-like 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 446.2112 3 446.210453 1335.60953 91389.43 0.41788 0.00018646 0.75575 0.00033722 1.1736 0.00052369 446.210708612591 449.546750525686 95.58 0.98335 95.58 95.058 96.041 -7.6294E-06 320 88 6 0 0 0 0.015818 1 53597 33.89 25.586 1 1.0651 1.3425 0 60174000 31160000 29015000 1935 194 1009 1119 3115 3115 FYEEVHDLER 10 0 1 Unmodified _FYEEVHDLER_ 0 0 0 0 F8VRJ2;B7Z5H0;H0YHC3;F8W020;F8W118;F8VXI6;F8VUX1;F8VY35;F8VV59;B7Z9C2;A0A024RBE6;F8W0J6;F5H4R6;B7Z2V4;H0YIV4;A0A024RBB7;P55209;E9PNW0;E9PJJ2;E9PS34;E9PNJ7;A8MXH2;F8VVB5;E9PKT8;H0YH88;C9J6D1;C9JZI7;F8W543;A0A024RCC9;B7ZAK9;B7ZB83;B7ZAC7;B4DS05;Q99733 F8VRJ2 F8VRJ2 NAP1L1;NAP1L4 Nucleosome assembly protein 1-like 1;Nucleosome assembly protein 1-like 4 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 668.8121 2 668.812042 1335.60953 NaN NaN NaN -0.18059 -0.00012078 NaN NaN NaN NaN 94.437 0.14856 94.437 94.358 94.507 0 0 0 0 0.00079455 1 52833 75.378 52.904 1 NaN NaN 0 6248800 6248800 0 1936 194 1009 1119 3116 3116 FYSPLPNDQLLK 12 1 0 Phospho (STY) _FYS(ph)PLPNDQLLK_ FYS(1)PLPNDQLLK FY(-62.33)S(62.33)PLPNDQLLK 0 0 1 0 Q9UIF8;Q8NC87 Q9UIF8 Q9UIF8 BAZ2B Bromodomain adjacent to zinc finger domain protein 2B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 757.8697 2 757.868175 1513.7218 69939.17 0.91743 0.00069529 0.16929 0.0001283 1.0867 0.00082359 757.868176874443 761.875213801764 116.24 0.65039 116.24 115.96 116.61 7.6294E-06 201 57 6 0 0 0 5.7122E-06 3 69370 95.417 86.083 2 0.41815 0.51121 0 19410000 12952000 6457700 1937 1231 1010 1120 3117;3118;3119 3118 2509 GAAEEAELEDSDDEEK 16 1 0 Phospho (STY) _GAAEEAELEDS(ph)DDEEK_ GAAEEAELEDS(1)DDEEK GAAEEAELEDS(205.68)DDEEK 0 0 1 0 F6XM96;B4DSX8;A0A024R1I7;Q9UBB9 F6XM96 F6XM96 TFIP11 Tuftelin-interacting protein 11 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 912.8441 2 908.835848 1815.65714 64258.62 0.77433 0.00070374 -0.69583 -0.0006324 0.078501 7.1345E-05 908.835801041276 912.842900409688 49.036 1.2443 49.036 48.423 49.667 0 488 92 7 0 0 0 1.5599E-132 1 19392 205.68 193.48 1 0.8673 1.0903 0 28707000 15648000 13058000 1938 45 1011 1121 3120 3120 54 GAAEEAELEDSDDEEKPVK 19 2 0 Phospho (STY) _GAAEEAELEDS(ph)DDEEKPVK_ GAAEEAELEDS(1)DDEEKPVK GAAEEAELEDS(93.77)DDEEKPVK 0 0 1 1 F6XM96;B4DSX8;A0A024R1I7;Q9UBB9 F6XM96 F6XM96 TFIP11 Tuftelin-interacting protein 11 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1078.9568 2 1070.94392 2139.87328 59372.95 0.35832 0.00038374 -0.056342 -6.0339E-05 0.30198 0.0003234 1071.4449964885 1078.95809875337 61.286 0.70826 61.286 60.937 61.645 0 326 53 9 0 0 0 2.4161E-17 1 28046 93.768 93.768 1 0.85919 1.0927 0 78247000 40887000 37360000 1939 45 1012 1122 3121 3121 54 GAAEEAELEDSDDEEKPVK 19 2 0 Phospho (STY) _GAAEEAELEDS(ph)DDEEKPVK_ GAAEEAELEDS(1)DDEEKPVK GAAEEAELEDS(95.67)DDEEKPVK 0 0 1 1 F6XM96;B4DSX8;A0A024R1I7;Q9UBB9 F6XM96 F6XM96 TFIP11 Tuftelin-interacting protein 11 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 719.9753 3 714.298371 2139.87328 72502.38 0.79748 0.00056964 -0.22259 -0.00015899 0.57489 0.00041065 714.298251466838 719.641054480771 61.258 0.75668 61.258 60.888 61.645 3.8147E-06 412 56 10 0 0 0 8.6608E-18 1 28107 95.666 87.172 1 0.87306 1.1198 0 105780000 52425000 53353000 1940 45 1012 1122 3122 3122 54 GAASQARGSDSEDGEFEIQAEDDAR 25 0 2 2 Phospho (STY) _GAAS(ph)QARGS(ph)DSEDGEFEIQAEDDAR_ GAAS(0.667)QARGS(0.667)DS(0.667)EDGEFEIQAEDDAR GAAS(0)QARGS(0)DS(0)EDGEFEIQAEDDAR 0 0 2 1 Q8TDD1;H0YHZ9 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 931.0266 3 924.3537 2770.03927 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.205 1 79.205 78.705 79.705 0 0 0 0 0.0018676 1 41702 40.669 33.308 3 1941 1162 1013 1123 3123 3123 2242;2243;2244 GAASQARGSDSEDGEFEIQAEDDAR 25 0 2 2 Phospho (STY) _GAAS(ph)QARGS(ph)DSEDGEFEIQAEDDAR_ GAAS(0.718)QARGS(0.641)DS(0.641)EDGEFEIQAEDDAR GAAS(1.06)QARGS(0)DS(0)EDGEFEIQAEDDAR 0 0 2 1 Q8TDD1;H0YHZ9 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 924.3555 3 924.3537 2770.03927 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.448 1 79.448 78.948 79.948 0 0 0 0 0.00070662 1 41879 43.162 35.45 3 1942 1162 1013 1123 3124 3124 2242;2243;2244 GAASQARGSDSEDGEFEIQAEDDAR 25 0 2 2 Phospho (STY) _GAAS(ph)QARGS(ph)DSEDGEFEIQAEDDAR_ GAAS(0.702)QARGS(0.649)DS(0.649)EDGEFEIQAEDDAR GAAS(0.71)QARGS(0)DS(0)EDGEFEIQAEDDAR 0 0 2 1 Q8TDD1;H0YHZ9 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 931.0287 3 924.3537 2770.03927 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.982 1 79.982 79.482 80.482 -7.6294E-06 0 0 0 0.00070662 1 42273 43.162 36.131 3 1943 1162 1013 1123 3125 3125 2242;2243;2244 GAASTLVPGVSETSASPGSPSVR 23 0 1 2 Phospho (STY) _GAASTLVPGVSETSAS(ph)PGS(ph)PSVR_ GAAS(0.045)T(0.219)LVPGVS(0.249)ET(0.257)S(0.267)AS(0.301)PGS(0.552)PS(0.11)VR GAAS(-10.7)T(-3.78)LVPGVS(-2.58)ET(-1.74)S(-1.17)AS(1.17)PGS(5.26)PS(-7.72)VR 0 0 2 0 A0A0A0MS59;Q6ZRS2;A0A0C4DFX4 A0A0A0MS59 A0A0A0MS59 SRCAP Helicase SRCAP MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1137.5079 2 1137.50617 2272.99779 57449.12 0.55599 0.00063245 0.77001 0.00087589 1.326 0.0015083 1138.0083375706 1142.51092778826 105.24 1.2674 105.24 104.75 106.02 -7.6294E-06 523 86 10 0 0 0 4.6488E-07 1 61116 50.358 40.825 28 0.5377 0.67893 0 100950000 62449000 38502000 1944 292 1014 1124 3126 3126 465;466 GADSELSTVPSVTK 14 1 0 Phospho (STY) _GADSELSTVPS(ph)VTK_ GADSELST(0.001)VPS(0.729)VT(0.27)K GADS(-63.6)ELS(-37.51)T(-30.04)VPS(4.32)VT(-4.32)K 0 0 1 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 740.3523 2 735.839811 1469.66507 70638.01 1.0935 0.00080465 2.7744 0.0020415 3.8679 0.0028461 736.34364117432 740.351164248321 80.981 1.2999 80.981 80.347 81.647 0 383 121 7 0 0 0 0.0014572 1 51762 67.579 60.889 5 1.2385 0.9609 0 12823000 6079500 6743300 1945 995 1015 1125 3127 3127 1798 GAEAFGDSEEDGEDVFEVEK 20 1 0 Phospho (STY) _GAEAFGDS(ph)EEDGEDVFEVEK_ GAEAFGDS(1)EEDGEDVFEVEK GAEAFGDS(77.08)EEDGEDVFEVEK 0 0 1 0 Q99549;B3KS10 Q99549 Q99549 MPHOSPH8 M-phase phosphoprotein 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1124.4436 2 1119.93355 2237.85255 57621.83 0.38636 0.0004327 0.29827 0.00033405 0.68463 0.00076674 1120.43524716914 1123.94086928272 107.17 1.1039 107.17 106.62 107.72 0 810 91 12 0 0 0 2.878E-10 3 62306 77.078 71.368 1 0.8743 1.0813 0 316690000 170150000 146530000 1946 1191 1016 1126 3128;3129;3130 3129 2355 GAEAFGDSEEDGEDVFEVEK 20 1 0 Phospho (STY) _GAEAFGDS(ph)EEDGEDVFEVEK_ GAEAFGDS(1)EEDGEDVFEVEK GAEAFGDS(181.14)EEDGEDVFEVEK 0 0 1 0 Q99549;B3KS10 Q99549 Q99549 MPHOSPH8 M-phase phosphoprotein 8 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1124.4429 2 1119.93355 2237.85255 57997.92 0.772 0.00086459 -0.015131 -1.6946E-05 0.75687 0.00084765 1120.43503672219 1123.94064314889 114.24 1.2206 114.24 113.84 115.06 0 947 115 12 0 0 0 2.9244E-99 1 73451 181.14 166.11 1 1.3354 0.89095 0 498720000 205880000 292850000 1947 1191 1016 1126 3131 3131 2355 GAEHITTYTFNTHK 14 1 0 Unmodified _GAEHITTYTFNTHK_ 0 0 0 0 Q7Z7K6 Q7Z7K6 Q7Z7K6 CENPV Centromere protein V MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 543.2698 3 540.5986 1618.77397 81747.02 0.60632 0.00032778 -0.019179 -1.0368E-05 0.58714 0.00031741 540.598592833985 543.269872161729 106.78 1.9191 106.78 105.46 107.38 0 708 142 7 0 0 0 4.0171E-42 6 61878 156.08 143.66 1 1.2438 1.5609 0 56854000 23319000 33536000 1948 1139 1017 1127 3132;3133;3134;3135;3136;3137 3135 GAFGKPQGTVAR 12 1 1 Unmodified _GAFGKPQGTVAR_ 0 0 0 1 F8W7C6;A0A087WV22;X1WI28;X5D2T3;P27635;H7C123;H7C2C5;Q96L21 F8W7C6 F8W7C6 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 603.8393 2 594.827829 1187.64111 79526.46 0.70359 0.00041852 0.15374 9.145E-05 0.85733 0.00050997 594.827741419632 603.839064759316 67.534 0.26004 67.534 67.414 67.674 0 61 21 5 0 0 0 0.016587 1 33241 62.463 50.973 1 1.0153 1.1344 0 16899000 8509200 8389900 1949 253 1018 1128 3138 3138 GAGDGSDEEVDGKADGAEAKPAE 23 2 0 Phospho (STY) _GAGDGS(ph)DEEVDGKADGAEAKPAE_ GAGDGS(1)DEEVDGKADGAEAKPAE GAGDGS(42.05)DEEVDGKADGAEAKPAE 0 0 1 2 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1128.4532 2 1127.95281 2253.89106 57969.57 0.59962 0.00067635 0.15228 0.00017177 0.7519 0.00084811 1128.45397406035 1135.96705458526 26.265 0.53442 26.265 26.089 26.623 0 130 24 9 0 0 0 9.8571E-06 1 12401 42.052 33.343 1 9.5454 7.1591 0 82369000 6296400 76073000 1950 49 1019 1129 3139 3139 59 GAGGSPVGVEEGLVNVGTGQK 21 1 0 Phospho (STY) _GAGGS(ph)PVGVEEGLVNVGTGQK_ GAGGS(1)PVGVEEGLVNVGTGQK GAGGS(179.28)PVGVEEGLVNVGT(-179.28)GQK 0 0 1 0 Q7Z5J4 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1000.4832 2 996.475326 1990.9361 61462.39 1.2495 0.0012451 0.46499 0.00046335 1.7145 0.0017085 996.977195465903 1000.48282767727 102.04 1.2797 102.04 101.49 102.77 0 806 102 10 0 0 0 1.9352E-161 4 58957 206.8 194.1 2 0.6399 0.79175 0 255120000 160820000 94297000 1951 1137 1020 1130 3140;3141;3142;3143 3143 2178 GAGGSPVGVEEGLVNVGTGQK 21 1 0 Phospho (STY) _GAGGS(ph)PVGVEEGLVNVGTGQK_ GAGGS(1)PVGVEEGLVNVGTGQK GAGGS(48.18)PVGVEEGLVNVGT(-48.18)GQK 0 0 1 0 Q7Z5J4 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1000.9845 2 996.475326 1990.9361 NaN NaN NaN 0.34452 0.00034331 NaN NaN NaN NaN 108.62 1.263 108.62 108.16 109.43 0 0 0 0 7.8148E-06 1 69720 48.824 36.263 2 NaN NaN 0 290280000 0 290280000 1952 1137 1020 1130 3144 3144 2178 GAGNCPECGTPLRK 14 1 1 Phospho (STY) _GAGNCPECGT(ph)PLRK_ GAGNCPECGT(1)PLRK GAGNCPECGT(62.94)PLRK 0 0 1 1 A0A024R669;A0A024R688;P51948 A0A024R669 A0A024R669 MNAT1 CDK-activating kinase assembly factor MAT1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 538.9011 3 532.893464 1595.65856 81636.59 0.539 0.00028723 0.12802 6.8222E-05 0.66702 0.00035545 532.893576410843 538.901161192874 21.215 0.57725 21.215 20.989 21.566 0 100 25 9 0 0 0 0.00057621 2 7979 62.94 55.231 1 0.68711 0.5251 0 22317000 13084000 9232900 1953 118 1021 1131 3145;3146 3146 2642 GAGNCPECGTPLRK 14 1 1 Phospho (STY) _GAGNCPECGT(ph)PLRK_ GAGNCPECGT(1)PLRK GAGNCPECGT(63.29)PLRK 0 0 1 1 A0A024R669;A0A024R688;P51948 A0A024R669 A0A024R669 MNAT1 CDK-activating kinase assembly factor MAT1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 798.8371 2 798.836557 1595.65856 67025.8 0.76599 0.0006119 0.028562 2.2816E-05 0.79455 0.00063472 798.836759555554 807.848126617819 21.221 0.53485 21.221 21.031 21.566 0 76 21 8 0 0 0 0.0039707 1 7980 63.29 50.73 1 0.65751 0.50198 0 18370000 10827000 7542400 1954 118 1021 1131 3147 3147 2642 GAGSVFR 7 0 1 Unmodified _GAGSVFR_ 0 0 0 0 E9PKZ0;P62917;G3V1A1;B4DVG7;E9PKU4;E9PP36 E9PKZ0 E9PKZ0 RPL8 60S ribosomal protein L8 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 352.192 2 347.187563 692.360573 NaN NaN NaN 0.10248 3.558E-05 NaN NaN NaN NaN 62.538 0.52365 62.538 62.293 62.816 0 0 0 0 0.020274 1 29097 57.463 16.543 1 NaN NaN 0 5961900 0 5961900 1955 811 1022 1132 3148 3148 GAPAAATAPAPTAHK 15 1 0 Unmodified _GAPAAATAPAPTAHK_ 0 0 0 0 Q92522 Q92522 Q92522 H1FX Histone H1x MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 666.357 2 666.356951 1330.69935 76242.48 0.71851 0.00047879 -0.057032 -3.8004E-05 0.66148 0.00044078 666.356919643644 670.363802877805 58.561 0.56949 58.561 58.219 58.788 3.8147E-06 189 45 6 0 0 0 1.4307E-17 1 25886 114.86 114.86 1 0.93683 1.1435 0 18792000 9755300 9036600 1956 1171 1023 1133 3149 3149 GAPSSPATGVLPSPQGK 17 1 0 Phospho (STY) _GAPSS(ph)PATGVLPSPQGK_ GAPS(0.269)S(0.724)PAT(0.007)GVLPSPQGK GAPS(-4.31)S(4.31)PAT(-20.22)GVLPS(-41.34)PQGK 0 0 1 0 Q5SRE5 Q5SRE5 Q5SRE5 NUP188 Nucleoporin NUP188 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 819.8478 2 815.895452 1629.77635 68989.92 0.84221 0.00068716 0.19588 0.00015982 1.0381 0.00084697 815.895418920202 819.902812609982 78.45 0.88214 78.45 78.042 78.925 0 194 78 5 0 0 0 5.9618E-05 2 41108 58.83 58.83 4 1.2285 1.5066 0 21032000 8167200 12865000 1957 1098 1024 1134 3150;3151 3150 2076;2077;2078 GAPSSPATGVLPSPQGK 17 1 0 Phospho (STY) _GAPS(ph)SPATGVLPSPQGK_ GAPS(0.407)S(0.407)PAT(0.186)GVLPSPQGK GAPS(0)S(0)PAT(-3.39)GVLPS(-30.11)PQGK 0 0 1 0 Q5SRE5 Q5SRE5 Q5SRE5 NUP188 Nucleoporin NUP188 homolog MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 819.904 2 815.895452 1629.77635 69574.03 1.1399 0.00093003 0.39412 0.00032156 1.534 0.0012516 816.397157795554 819.902391931573 80.308 0.74878 80.308 80.01 80.759 0 228 71 5 0 0 0 0.0002249 1 51405 47.189 47.189 4 0.86026 0.67107 0 13977000 6967100 7009700 1958 1098 1024 1134 3152 3152 2076;2077;2078 GAPSSPATGVLPSPQGK 17 1 0 2 Phospho (STY) _GAPSS(ph)PATGVLPS(ph)PQGK_ GAPS(0.13)S(0.862)PAT(0.031)GVLPS(0.978)PQGK GAPS(-8.27)S(8.27)PAT(-16.56)GVLPS(16.56)PQGK 0 0 2 0 Q5SRE5 Q5SRE5 Q5SRE5 NUP188 Nucleoporin NUP188 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 856.3795 2 855.878617 1709.74268 65934.66 0.71411 0.00061119 0.05519 4.7236E-05 0.7693 0.00065843 856.379659352337 859.886041369318 79.71 0.84576 79.71 79.32 80.165 0 189 77 4 0 0 0 4.2054E-05 2 42024 60.564 60.564 6 1.0065 1.2643 0 28323000 15901000 12422000 1959 1098 1024 1135 3153;3154 3154 2076;2077;2078 GAVDGGLSIPHSTK 14 1 0 Unmodified _GAVDGGLSIPHSTK_ 0 0 0 0 B3KTM6;A2RUM7;Q59GX9;P46777;Q5T7N0 B3KTM6 B3KTM6 RPL5 60S ribosomal protein L5 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 674.3631 2 669.854241 1337.69393 NaN NaN NaN 0.01737 1.1635E-05 NaN NaN NaN NaN 87.221 0.33613 87.221 87.151 87.488 0 0 0 0 0.0071783 1 47480 44.847 29.185 1 NaN NaN 0 5137300 0 5137300 1960 409 1025 1136 3155 3155 GAVDGGLSIPHSTK 14 1 0 Unmodified _GAVDGGLSIPHSTK_ 0 0 0 0 B3KTM6;A2RUM7;Q59GX9;P46777;Q5T7N0 B3KTM6 B3KTM6 RPL5 60S ribosomal protein L5 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 673.8621 2 669.854241 1337.69393 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.1 1 86.1 85.6 86.6 0 0 0 0 1.5947E-06 1 46604 67.385 44.744 1 1961 409 1025 1136 3156 3156 GAVDGGLSIPHSTK 14 1 0 Unmodified _GAVDGGLSIPHSTK_ 0 0 0 0 B3KTM6;A2RUM7;Q59GX9;P46777;Q5T7N0 B3KTM6 B3KTM6 RPL5 60S ribosomal protein L5 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 669.856 2 669.854241 1337.69393 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.873 1 86.873 86.373 87.373 0 0 0 0 0.003022 1 47148 45.911 27.643 1 1962 409 1025 1136 3157 3157 GAVDGGLSIPHSTK 14 1 0 Unmodified _GAVDGGLSIPHSTK_ 0 0 0 0 B3KTM6;A2RUM7;Q59GX9;P46777;Q5T7N0 B3KTM6 B3KTM6 RPL5 60S ribosomal protein L5 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 673.8631 2 669.854241 1337.69393 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.874 1 86.874 86.374 87.374 -7.6294E-06 0 0 0 0.0011138 1 47149 51.286 28.645 1 1963 409 1025 1136 3158 3158 GAVDGGLSIPHSTK 14 1 0 Unmodified _GAVDGGLSIPHSTK_ 0 0 0 0 B3KTM6;A2RUM7;Q59GX9;P46777;Q5T7N0 B3KTM6 B3KTM6 RPL5 60S ribosomal protein L5 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 669.8552 2 669.854241 1337.69393 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.964 1 86.964 86.464 87.464 0 0 0 0 0.0036399 1 47207 44.564 30.871 1 1964 409 1025 1136 3159 3159 GDALNLSSPK 10 1 0 Phospho (STY) _GDALNLS(ph)SPK_ GDALNLS(0.611)S(0.389)PK GDALNLS(1.97)S(-1.97)PK 0 0 1 0 K7EIX9;K7EMC4;A0A0C4DGQ1;A0A024R4S6;A6NJL1;Q9BUG6 K7EIX9 K7EIX9 ZSCAN5A;ZSCAN5;ZSCAN5B Zinc finger and SCAN domain-containing protein 5B;Zinc finger and SCAN domain-containing protein 5A MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 545.258 2 541.249904 1080.48525 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.136 1 62.136 61.636 62.636 3.8147E-06 0 0 0 0.003993 1 38613 58.172 25.649 2 1965 92 1026 1137 3160 3160 119 GDDEEWNEVLNK 12 1 0 Unmodified _GDDEEWNEVLNK_ 0 0 0 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 724.3341 2 724.320428 1446.6263 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.01 1 93.01 92.51 93.51 7.6294E-06 0 0 0 0.0057802 1 51724 49.35 36.823 1 1966 1202 1027 1138 3161 3161 GDEELDSLIK 10 1 0 Unmodified _GDEELDSLIK_ 0 0 0 0 Q71UI9;P0C0S5;C9J0D1;C9J386 Q71UI9 Q71UI9 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z;Histone H2A ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1118.5001 1 1118.55756 1117.55028 NaN NaN NaN 0.73603 0.00082329 NaN NaN NaN NaN 100.54 0.3582 100.54 100.35 100.71 -7.6294E-06 0 0 0 0.023432 1 57670 23.429 6.6525 1 NaN NaN 0 4382100 4382100 0 1967 961 1028 1139 3162 3162 GDEELDSLIK 10 1 0 Unmodified _GDEELDSLIK_ 0 0 0 0 Q71UI9;P0C0S5;C9J0D1;C9J386 Q71UI9 Q71UI9 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z;Histone H2A ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 563.7893 2 559.782418 1117.55028 NaN NaN NaN -4.0537 -0.0022692 NaN NaN NaN NaN 100.77 1.1406 100.77 99.896 101.04 0 0 0 0 0.0024302 1 57930 68.371 27.342 1 NaN NaN 0 182050000 0 182050000 1968 961 1028 1139 3163 3163 GDEELDSLIK 10 1 0 Unmodified _GDEELDSLIK_ 0 0 0 0 Q71UI9;P0C0S5;C9J0D1;C9J386 Q71UI9 Q71UI9 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z;Histone H2A MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 559.7836 2 559.782418 1117.55028 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.29 1 100.29 99.788 100.79 0 0 0 0 0.00088283 1 57384 106.6 75.987 1 1969 961 1028 1139 3164 3164 GDEELDSLIK 10 1 0 Unmodified _GDEELDSLIK_ 0 0 0 0 Q71UI9;P0C0S5;C9J0D1;C9J386 Q71UI9 Q71UI9 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z;Histone H2A MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 559.7827 2 559.782418 1117.55028 NaN NaN NaN NaN NaN NaN NaN NaN NaN 101.05 1 101.05 100.55 101.55 0 0 0 0 0.0018441 1 58024 100.98 66.16 1 1970 961 1028 1139 3165 3165 GDEELDSLIK 10 1 0 Unmodified _GDEELDSLIK_ 0 0 0 0 Q71UI9;P0C0S5;C9J0D1;C9J386 Q71UI9 Q71UI9 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z;Histone H2A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 559.7826 2 559.782418 1117.55028 81568.55 0.50011 0.00027995 0.22253 0.00012457 0.72264 0.00040452 559.78242044226 563.789657534943 93.719 0.21225 93.719 93.637 93.849 7.6294E-06 94 19 6 0 0 0 1.0779E-07 2 60347 128.12 95.281 1 0.83333 0.54991 0 30181000 15175000 15006000 1971 961 1028 1139 3166;3167 3167 GDFSYIGNLMTK 12 1 0 Oxidation (M),Phospho (STY) _GDFS(ph)YIGNLM(ox)TK_ GDFSYIGNLM(1)TK GDFS(1)YIGNLMTK GDFSYIGNLM(95.18)TK GDFS(44.73)Y(-44.73)IGNLMT(-72)K 0 1 1 0 Q6NUR1;Q9BPX3 Q6NUR1 Q6NUR1 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 721.307 2 721.307093 1440.59963 70967.48 0.78119 0.00056348 0.16232 0.00011708 0.94351 0.00068056 721.307315225472 725.314357086629 107.17 1.152 107.17 106.68 107.83 0 690 93 10 0 0 0 5.2266E-06 3 62790 95.183 79.568 3 0.83559 1.0336 0 286490000 158570000 127920000 1972 1119 1029 1140 3168;3169;3170 3169 316 2123 GDFSYIGNLMTK 12 1 0 Phospho (STY) _GDFS(ph)YIGNLMTK_ GDFS(1)YIGNLMTK GDFS(39.75)Y(-39.75)IGNLMT(-65.7)K 0 0 1 0 Q6NUR1;Q9BPX3 Q6NUR1 Q6NUR1 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 713.31 2 713.309635 1424.60472 72184.32 1.0181 0.00072625 -0.64779 -0.00046207 0.37036 0.00026418 713.309184018599 717.316418100406 134.57 0.23041 134.57 134.45 134.68 0 65 10 9 0 0 0 0.0010483 2 86837 78.529 67.378 3 1.6484 1.1067 0 27039000 10622000 16417000 1973 1119 1029 1141 3171;3172 3172 2123 GDQPAASGDSDDDEPPPLPR 20 0 1 Phospho (STY) _GDQPAASGDS(ph)DDDEPPPLPR_ GDQPAAS(0.002)GDS(0.998)DDDEPPPLPR GDQPAAS(-26.16)GDS(26.16)DDDEPPPLPR 0 0 1 0 Q6IB11;O00264 Q6IB11 Q6IB11 PGRMC1 Membrane-associated progesterone receptor component 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1063.9368 2 1058.42877 2114.84299 59824.06 0.39587 0.000419 0.02934 3.1054E-05 0.42521 0.00045005 1058.42886521635 1063.43303069833 77.24 1.1053 77.24 76.649 77.755 7.6294E-06 602 96 8 0 0 0 2.7335E-22 3 40458 104.84 96.972 2 1.3673 1.7273 0 133920000 53557000 80363000 1974 916 1030 1142 3173;3174;3175 3174 1538 GDQVLNFSDAEDLIDDSK 18 1 0 Phospho (STY) _GDQVLNFS(ph)DAEDLIDDSK_ GDQVLNFS(1)DAEDLIDDSK GDQVLNFS(66.26)DAEDLIDDS(-66.26)K 0 0 1 0 A0A024R134;F8W126;Q96EZ8 A0A024R134 A0A024R134 MCRS1 Microspherule protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1034.9453 2 1030.93844 2059.86233 59525.55 0.53973 0.00055643 -0.256 -0.00026392 0.28373 0.00029251 1030.93813644936 1034.94541425481 130.34 0.66547 130.34 130.03 130.69 0 460 62 10 0 0 0 8.8262E-14 1 79116 99.569 84.647 2 0.81044 1.0089 0 75474000 41463000 34011000 1975 36 1031 1143 3176 3176 44 GDRSPEPGQTWTR 13 0 2 Phospho (STY) _GDRS(ph)PEPGQTWTR_ GDRS(1)PEPGQTWTR GDRS(43.3)PEPGQT(-43.3)WT(-47.44)R 0 0 1 1 Q09666;B4DTV0;E9PJZ0;E9PKR9;E9PJC6;E9PLK4;Q96EC4;Q9BVU3 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 529.5671 3 522.894738 1565.66238 83132.72 0.56762 0.00029681 -0.27121 -0.00014182 0.29641 0.00015499 522.894647221053 529.566785604149 61.142 1.0718 61.142 60.627 61.698 3.8147E-06 380 79 6 0 0 0 0.0021438 1 27853 50.077 41.564 3 1.3982 1.7357 0 51081000 19813000 31269000 1976 1042 1032 1144 3177 3177 1940 GDSIEEILADSEDEEDNEEEERSR 24 0 2 Phospho (STY) _GDSIEEILADS(ph)EDEEDNEEEERSR_ GDSIEEILADS(0.994)EDEEDNEEEERS(0.006)R GDS(-47.59)IEEILADS(22.54)EDEEDNEEEERS(-22.54)R 0 0 1 1 B3KMR5;Q5JTH9;B3KPQ2;B3KY97 B3KMR5 B3KMR5 RRP12 RRP12-like protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 966.0553 3 959.04728 2874.12001 63450.82 0.85508 0.00082006 0.20705 0.00019857 1.0621 0.0010186 959.047675556257 966.053864190128 100.54 0.66643 100.54 100.21 100.88 -7.6294E-06 463 62 11 0 0 0 4.1467E-10 1 64547 56.46 56.46 3 1.1712 1.0086 0 20552000 8860100 11692000 1977 576 1033 1145 3178 3178 955 GDTPGHATPGHGGATSSAR 19 0 1 Unmodified _GDTPGHATPGHGGATSSAR_ 0 0 0 0 A0JLT9;Q32Q20;A0PJH5;Q7Z497;O75533 A0JLT9 A0JLT9 SF3B1 Splicing factor 3B subunit 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 581.9391 3 578.603184 1732.78772 79467.94 0.60793 0.00035175 -1.3609 -0.00078742 -0.75296 -0.00043566 578.602295084105 581.93856156072 62.589 0.3969 62.589 62.405 62.802 -3.8147E-06 149 31 6 0 0 0 4.9547E-18 1 29257 98.175 91.899 1 1.4434 1.8195 0 60750000 26031000 34719000 1978 398 1034 1146 3179 3179 GEAAAERPGEAAVASSPSK 19 1 1 Phospho (STY) _GEAAAERPGEAAVAS(ph)SPSK_ GEAAAERPGEAAVAS(0.417)S(0.417)PS(0.167)K GEAAAERPGEAAVAS(0)S(0)PS(-3.97)K 0 0 1 1 Q05C82;Q6NVI1;P29966 Q05C82 Q05C82 MARCKS Myristoylated alanine-rich C-kinase substrate MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 622.6212 3 622.286072 1863.83639 76510.74 0.94677 0.00058916 -0.08131 -5.0598E-05 0.86546 0.00053857 622.286301153104 628.293366300667 25.587 0.30908 25.587 25.423 25.732 0 81 17 7 0 0 0 5.0152E-06 1 11808 52.927 41.454 3 0.72477 0.55601 0 13916000 7713100 6202900 1979 981 1035 1147 3180 3180 1737;1738 GEAVLRPGLDAEPELSPEEQR 21 0 2 Phospho (STY) _GEAVLRPGLDAEPELS(ph)PEEQR_ GEAVLRPGLDAEPELS(1)PEEQR GEAVLRPGLDAEPELS(85.85)PEEQR 0 0 1 1 A0A024R836;C9JQV0;Q9BRJ6 A0A024R836 A0A024R836 MGC11257;C7orf50 Uncharacterized protein C7orf50 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 791.7133 3 791.375838 2371.10568 NaN NaN NaN 0.46557 0.00036844 NaN NaN NaN NaN 100.79 0.70725 100.79 100.36 101.07 0 0 0 0 1.9326E-14 1 57561 85.849 72.118 1 NaN NaN 0 27457000 27457000 0 1980 146 1036 1148 3181 3181 219 GEAVLRPGLDAEPELSPEEQR 21 0 2 Phospho (STY) _GEAVLRPGLDAEPELS(ph)PEEQR_ GEAVLRPGLDAEPELS(1)PEEQR GEAVLRPGLDAEPELS(51.96)PEEQR 0 0 1 1 A0A024R836;C9JQV0;Q9BRJ6 A0A024R836 A0A024R836 MGC11257;C7orf50 Uncharacterized protein C7orf50 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 798.3828 3 791.375838 2371.10568 68800.09 1.2175 0.0009635 -0.38285 -0.00030298 0.83465 0.00066052 791.709806824952 798.381828532402 100.04 1.0836 100.04 99.526 100.61 -7.6294E-06 779 103 10 0 0 0 3.4518E-07 1 64127 51.956 43.013 1 0.73156 0.63466 0 54730000 29451000 25279000 1981 146 1036 1148 3182 3182 219 GEFSASPMLK 10 1 0 Oxidation (M),Phospho (STY) _GEFSAS(ph)PM(ox)LK_ GEFSASPM(1)LK GEFS(0.006)AS(0.994)PMLK GEFSASPM(69.45)LK GEFS(-21.89)AS(21.89)PMLK 0 1 1 0 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 581.7469 2 581.74614 1161.47773 79931.59 0.60983 0.00035477 -0.035475 -2.0637E-05 0.57436 0.00033413 581.746081006765 585.753141433469 71.123 1.0781 71.123 70.562 71.641 0 359 105 5 0 0 0 0.0033115 1 35725 69.451 54.784 2 1.1098 1.4072 0 41699000 20604000 21094000 1982 383 1037 1149 3183 3183 93 607 GEGDAPFSEPGTTSTQRPSSPETATK 26 1 1 Phospho (STY) _GEGDAPFSEPGTTSTQRPS(ph)SPETATK_ GEGDAPFSEPGT(0.084)T(0.084)S(0.084)T(0.084)QRPS(0.251)S(0.251)PET(0.07)AT(0.092)K GEGDAPFS(-32.66)EPGT(-4.77)T(-4.77)S(-4.77)T(-4.77)QRPS(0)S(0)PET(-5.53)AT(-4.38)K 0 0 1 1 A0A140VK53;Q9UQ35;I3L4D8;I3L182;Q9UQ39;A0A087X1W1;I3L1I8 A0A140VK53 A0A140VK53 SRRM2 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 906.0659 3 905.730897 2714.17086 64191.16 0.69349 0.00062812 -0.26184 -0.00023715 0.43166 0.00039097 906.064916390969 912.072557540631 69.871 1.156 69.871 69.14 70.296 0 811 113 10 0 0 0 8.826E-23 2 34627 81.532 73.91 9 0.9795 1.1804 0 201940000 98033000 103910000 1983 383 1038 1150 3184;3185 3184 608;609 GEGIRTPLEK 10 1 1 Phospho (STY) _GEGIRT(ph)PLEK_ GEGIRT(1)PLEK GEGIRT(69.45)PLEK 0 0 1 1 Q12873;B4DLC6;B3KWV4;B4DKV1;Q2TAZ1 Q12873 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 590.2919 2 590.292103 1178.56965 NaN NaN NaN -0.30566 -0.00018043 NaN NaN NaN NaN 63.436 0.37072 63.436 63.186 63.557 0 0 0 0 0.0063238 1 29902 69.451 23.571 1 NaN NaN 0 5964700 5964700 0 1984 1045 1039 1151 3186 3186 2917 GEPNVSYICSR 11 0 1 Phospho (STY) _GEPNVSY(ph)ICSR_ GEPNVS(0.027)Y(0.936)ICS(0.037)R GEPNVS(-15.45)Y(14.04)ICS(-14.04)R 0 0 1 0 Q68D16;A8MT37;Q6FI27;B5BUC0;A0A024R0L5;P49841;P49840 Q68D16 Q68D16 DKFZp686D0638;GSK3A;GSK3B Glycogen synthase kinase-3 beta;Glycogen synthase kinase-3 alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 686.2872 2 681.281409 1360.54827 77332.46 0.51206 0.00034886 -0.056997 -3.8831E-05 0.45507 0.00031003 681.281290703966 686.285587729613 65.766 0.66573 65.766 65.421 66.086 0 120 51 4 0 0 0 0.0023962 2 31498 67.726 44.297 3 1.5457 1.8842 0 21163000 10047000 11116000 1985 31 1040 1152 3187;3188 3187 3015 GEPNVSYICSR 11 0 1 Phospho (STY) _GEPNVSY(ph)ICSR_ GEPNVS(0.237)Y(0.6)ICS(0.162)R GEPNVS(-4.03)Y(4.03)ICS(-5.68)R 0 0 1 0 Q68D16;A8MT37;Q6FI27;B5BUC0;A0A024R0L5;P49841;P49840 Q68D16 Q68D16 DKFZp686D0638;GSK3A;GSK3B Glycogen synthase kinase-3 beta;Glycogen synthase kinase-3 alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 681.2816 2 681.281409 1360.54827 73650.24 0.8803 0.00059973 -0.11957 -8.1461E-05 0.76073 0.00051827 681.281049506875 686.285886482696 62.852 1.1147 62.852 62.319 63.434 3.8147E-06 456 105 6 0 0 0 0.0059523 1 38927 49.189 36.963 3 1.0945 0.80488 0 24055000 10601000 13455000 1986 31 1040 1152 3189 3189 3015 GEQVSQNGLPAEQGSPR 17 0 1 Phospho (STY) _GEQVSQNGLPAEQGS(ph)PR_ GEQVSQNGLPAEQGS(1)PR GEQVS(-72.24)QNGLPAEQGS(72.24)PR 0 0 1 0 D6W5C0;K9MS24;B2ZZ89;A0A087WUZ3;Q01082;B4DIF8;Q8WYB3 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 922.9066 2 917.409986 1832.80542 60038.05 0.20766 0.00019051 -4.1868 -0.003841 -3.9792 -0.0036505 917.907513399458 922.911124860428 53.823 1.6957 53.823 53.135 54.831 3.8147E-06 858 135 10 0 0 0 2.7499E-17 3 22778 109.67 97.514 2 1.6007 2.0211 0 99293000 36763000 62530000 1987 250 1041 1153 3190;3191;3192 3192 398 GEQVSQNGLPAEQGSPR 17 0 1 Phospho (STY) _GEQVSQNGLPAEQGS(ph)PR_ GEQVSQNGLPAEQGS(1)PR GEQVS(-47.86)QNGLPAEQGS(47.86)PR 0 0 1 0 D6W5C0;K9MS24;B2ZZ89;A0A087WUZ3;Q01082;B4DIF8;Q8WYB3 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 922.416 2 917.409986 1832.80542 65221.07 0.77152 0.0007078 0.26657 0.00024456 1.0381 0.00095236 917.40990494604 922.414394961334 47.809 1.1393 47.809 47.259 48.398 0 503 106 7 0 0 0 1.9474E-09 1 28910 85.29 73.677 2 9.4075 6.3567 0 77059000 8141000 68918000 1988 250 1041 1153 3193 3193 398 GESDDFHMDFDSAVAPR 17 0 1 Oxidation (M),Phospho (STY) _GESDDFHM(ox)DFDS(ph)AVAPR_ GESDDFHM(1)DFDSAVAPR GESDDFHMDFDS(1)AVAPR GESDDFHM(114.88)DFDSAVAPR GES(-75.97)DDFHMDFDS(75.97)AVAPR 0 1 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 664.5876 3 664.587422 1990.74044 74463.02 0.99632 0.00066214 0.039823 2.6466E-05 1.0361 0.0006886 664.587574230076 667.923597322209 89.369 1.2901 89.369 88.721 90.011 -7.6294E-06 744 113 9 0 0 0 6.965E-22 2 49094 114.88 102.61 2 1.0488 1.3251 0 146670000 77456000 69217000 1989 962 1042 1154 3194;3195 3195 266 1690;1691 GESDDFHMDFDSAVAPR 17 0 1 Oxidation (M),Phospho (STY) _GESDDFHM(ox)DFDS(ph)AVAPR_ GESDDFHM(1)DFDSAVAPR GESDDFHMDFDS(1)AVAPR GESDDFHM(138.91)DFDSAVAPR GES(-96.94)DDFHMDFDS(96.94)AVAPR 0 1 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1001.3846 2 996.377495 1990.74044 61112.13 0.66089 0.00065849 0.27357 0.00027258 0.93446 0.00093108 996.377657367817 1001.38212469641 89.349 1.2191 89.349 88.825 90.044 0 717 107 10 0 0 0 3.7226E-43 2 49003 138.91 122.24 2 1.08 1.3646 0 151370000 72724000 78649000 1990 962 1042 1154 3196;3197 3196 266 1690;1691 GESDDFHMDFDSAVAPR 17 0 1 Oxidation (M),Phospho (STY) _GES(ph)DDFHM(ox)DFDSAVAPR_ GESDDFHM(1)DFDSAVAPR GES(1)DDFHMDFDSAVAPR GESDDFHM(95.35)DFDSAVAPR GES(64.16)DDFHMDFDS(-64.16)AVAPR 0 1 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 996.8802 2 996.377495 1990.74044 60906.38 1.1509 0.0011468 0.075251 7.4978E-05 1.2262 0.0012217 996.879306627913 1001.3819478029 91.107 1.2243 91.107 90.455 91.679 -7.6294E-06 690 105 8 0 0 0 3.8408E-12 4 50414 95.347 83.134 2 0.66394 0.83879 0 138760000 81895000 56865000 1991 962 1042 1154 3198;3199;3200;3201 3200 266 1690;1691 GESDDFHMDFDSAVAPR 17 0 1 Oxidation (M),Phospho (STY) _GES(ph)DDFHM(ox)DFDSAVAPR_ GESDDFHM(1)DFDSAVAPR GES(1)DDFHMDFDSAVAPR GESDDFHM(56.96)DFDSAVAPR GES(47.3)DDFHMDFDS(-47.3)AVAPR 0 1 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 996.8772 2 996.377495 1990.74044 61690.87 0.59304 0.00059089 -0.43403 -0.00043246 0.15901 0.00015843 996.377597259404 1001.38184232166 90.313 1.0345 90.313 89.721 90.756 0 627 98 10 0 0 0 5.5753E-05 1 57994 56.959 51.352 2 1.1638 0.78827 0 68293000 31157000 37136000 1992 962 1042 1154 3202 3202 266 1690;1691 GESDDFHMDFDSAVAPR 17 0 1 Oxidation (M) _GESDDFHM(ox)DFDSAVAPR_ GESDDFHM(1)DFDSAVAPR GESDDFHM(74.79)DFDSAVAPR 0 1 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 638.2669 3 637.931978 1910.77411 75827.08 1.0171 0.00064887 -0.29025 -0.00018516 0.72689 0.00046371 637.93117405624 641.268140454599 94.458 0.61068 94.458 94.085 94.695 0 225 48 6 0 0 0 4.803E-07 1 52686 74.786 64.301 1 0.93209 1.1733 0 50096000 27537000 22559000 1993 962 1042 1155 3203 3203 266 GESDDFHMDFDSAVAPR 17 0 1 Oxidation (M) _GESDDFHM(ox)DFDSAVAPR_ GESDDFHM(1)DFDSAVAPR GESDDFHM(85.62)DFDSAVAPR 0 1 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 637.931 3 637.931978 1910.77411 75827.12 1.0219 0.00065187 0.18814 0.00012002 1.21 0.0007719 638.266456278574 641.268142511546 95.226 1.1513 95.226 94.647 95.798 0 418 98 8 0 0 0 6.4252E-10 2 53263 85.619 78.863 1 0.8456 1.0673 0 81454000 41082000 40372000 1994 962 1042 1155 3204;3205 3204 266 GESDDFHMDFDSAVAPR 17 0 1 Oxidation (M) _GESDDFHM(ox)DFDSAVAPR_ GESDDFHM(1)DFDSAVAPR GESDDFHM(60.92)DFDSAVAPR 0 1 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 641.2689 3 637.931978 1910.77411 NaN NaN NaN -0.58436 -0.00037278 NaN NaN NaN NaN 94.779 0.64492 94.779 94.519 95.164 -7.6294E-06 0 0 0 4.3604E-07 1 53057 60.918 49.15 1 NaN NaN 0 30933000 0 30933000 1995 962 1042 1155 3206 3206 266 GESLDNLDSPR 11 0 1 Phospho (STY) _GESLDNLDS(ph)PR_ GESLDNLDS(1)PR GES(-69.19)LDNLDS(69.19)PR 0 0 1 0 E9PMS6;B7Z8W3;A0A1P7ZIM8;A0A0A0MTE2;E9PMT2;F8WD26;F8J2B5;J3KP06;Q8WWI1 E9PMS6 E9PMS6 LMO7 LIM domain only protein 7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 641.7695 2 641.769189 1281.52383 76725.91 0.8149 0.00052298 0.67065 0.0004304 1.4856 0.00095338 641.769340626676 646.773907509535 65.478 0.86166 65.478 65.052 65.913 0 155 64 4 0 0 0 3.2385E-09 2 31477 117.03 93.178 2 1.7459 2.1477 0 24863000 9330100 15533000 1996 391 1043 1156 3207;3208 3208 666 GESLDNLDSPR 11 0 1 Phospho (STY) _GESLDNLDS(ph)PR_ GESLDNLDS(1)PR GES(-76.52)LDNLDS(76.52)PR 0 0 1 0 E9PMS6;B7Z8W3;A0A1P7ZIM8;A0A0A0MTE2;E9PMT2;F8WD26;F8J2B5;J3KP06;Q8WWI1 E9PMS6 E9PMS6 LMO7 LIM domain only protein 7 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 646.774 2 641.769189 1281.52383 NaN NaN NaN -0.022538 -1.4464E-05 NaN NaN NaN NaN 60.417 1.2833 60.417 59.751 61.035 3.8147E-06 0 0 0 3.637E-15 2 37577 107.99 72.349 2 NaN NaN 0 34730000 0 34730000 1997 391 1043 1156 3209;3210 3210 666 GEVASDLVSPANQELHVEK 19 1 0 Phospho (STY) _GEVASDLVS(ph)PANQELHVEK_ GEVAS(0.023)DLVS(0.977)PANQELHVEK GEVAS(-16.26)DLVS(16.26)PANQELHVEK 0 0 1 0 W5ZR30;Q9UGU0 W5ZR30 W5ZR30 TCF20 Transcription factor 20 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1051.4946 2 1051.49372 2100.97288 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.769 1 95.769 95.269 96.269 -7.6294E-06 0 0 0 0.0015499 1 53856 48.883 35.903 2 1998 1227 1044 1157 3211 3211 2493 GFAFVQYVNER 11 0 1 Unmodified _GFAFVQYVNER_ 0 0 0 0 G3V576;G3V4W0;B4DY08;B2R5W2;G3V4C1;B2R603;G3V2Q1;A8K9A4;P07910;G3V4M8;G3V5X6;G3V3K6;G3V251;B4DMJ1;B4DSU6;G3V555;G3V575;B3KX96 G3V576 G3V576 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 670.337 2 665.332944 1328.65134 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.18 1 111.18 110.68 111.68 0 0 0 0 0.0044481 1 65748 93.649 75.829 1 1999 503 1045 1158 3212 3212 GFAFVQYVNER 11 0 1 Unmodified _GFAFVQYVNER_ 0 0 0 0 G3V576;G3V4W0;B4DY08;B2R5W2;G3V4C1;B2R603;G3V2Q1;A8K9A4;P07910;G3V4M8;G3V5X6;G3V3K6;G3V251;B4DMJ1;B4DSU6;G3V555;G3V575;B3KX96 G3V576 G3V576 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 665.3328 2 665.332944 1328.65134 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.56 1 111.56 111.06 112.06 0 0 0 0 0.0023891 1 66044 64.04 47.902 1 2000 503 1045 1158 3213 3213 GFAFVTFESPADAK 14 1 0 Phospho (STY) _GFAFVTFES(ph)PADAK_ GFAFVT(0.001)FES(0.999)PADAK GFAFVT(-32.33)FES(32.33)PADAK 0 0 1 0 H0Y6E7;H3BT71;B4E352;P38159;Q2VIN3;Q96E39;A0A1B0GUK8;H3BR27;A8K8A6;O75526;Q8N7X1 H0Y6E7 H0Y6E7 RBMX;RBMXL1;RBMXL2;RBMXL3 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1;RNA-binding motif protein, X-linked-like-2;RNA-binding motif protein, X-linked-like-3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 787.8558 2 783.847439 1565.68033 69552.59 0.80075 0.00062766 -0.40066 -0.00031406 0.40008 0.00031361 783.847078741514 787.854199122622 122.01 1.107 122.01 121.56 122.67 0 579 80 10 0 0 0 2.1719E-06 3 74094 89.466 79.235 2 1.438 1.7818 0 134810000 55256000 79558000 2001 684 1046 1159 3214;3215;3216 3215 1129 GFAFVTFESPADAK 14 1 0 Phospho (STY) _GFAFVTFES(ph)PADAK_ GFAFVT(0.002)FES(0.998)PADAK GFAFVT(-26.16)FES(26.16)PADAK 0 0 1 0 H0Y6E7;H3BT71;B4E352;P38159;Q2VIN3;Q96E39;A0A1B0GUK8;H3BR27;A8K8A6;O75526;Q8N7X1 H0Y6E7 H0Y6E7 RBMX;RBMXL1;RBMXL2;RBMXL3 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1;RNA-binding motif protein, X-linked-like-2;RNA-binding motif protein, X-linked-like-3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 787.8554 2 783.847439 1565.68033 68616.39 1.017 0.00079717 0.29937 0.00023466 1.3164 0.0010318 783.847734434125 787.854688910234 130.14 1.1973 130.14 129.59 130.79 0 863 113 10 0 0 0 0.00055238 2 84205 71.279 58.299 2 0.87657 0.58612 0 128700000 68256000 60441000 2002 684 1046 1159 3217;3218 3218 1129 GFAFVYFENVDDAK 14 1 0 Unmodified _GFAFVYFENVDDAK_ 0 0 0 0 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995;H7BXF3 Q8N1H4 Q8N1H4 DKFZp686F18120;TRA2B Transformer-2 protein homolog beta MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 811.3802 2 811.380288 1620.74602 NaN NaN NaN NaN NaN NaN NaN NaN NaN 124.8 1 124.8 124.3 125.3 7.6294E-06 0 0 0 8.4228E-05 1 75657 72.652 46.714 1 2003 556 1047 1160 3219 3219 GFGEYSRSPTF 11 0 1 Phospho (STY) _GFGEYS(ph)RSPTF_ GFGEY(0.004)S(0.619)RS(0.247)PT(0.13)F GFGEY(-21.94)S(3.99)RS(-3.99)PT(-6.77)F 0 0 1 1 D6REL5;Q6UWZ7 D6REL5 D6REL5 FAM175A BRCA1-A complex subunit Abraxas MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 664.2706 2 664.271368 1326.52818 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.432 1 94.432 93.932 94.932 0 0 0 0 0.0052895 1 52854 50.149 35.588 4 2004 776 1048 1161 3220 3220 1312;1313 GFGEYSRSPTF 11 0 1 Phospho (STY) _GFGEYS(ph)RSPTF_ GFGEY(0.004)S(0.446)RS(0.446)PT(0.103)F GFGEY(-20.57)S(0)RS(0)PT(-6.35)F 0 0 1 1 D6REL5;Q6UWZ7 D6REL5 D6REL5 FAM175A BRCA1-A complex subunit Abraxas MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 669.276 2 664.271368 1326.52818 76483.21 0.9581 0.00063644 0.032283 2.1445E-05 0.99038 0.00065788 664.271301864954 669.275480784598 96.29 1.1306 96.29 95.634 96.765 0 447 112 6 0 0 0 0.014872 1 61775 42.031 28.261 4 1.2159 0.90924 0 21505000 8612700 12893000 2005 776 1048 1161 3221 3221 1312;1313 GFGFVCFSSPEEATK 15 1 0 Phospho (STY) _GFGFVCFSS(ph)PEEATK_ GFGFVCFS(0.142)S(0.716)PEEAT(0.142)K GFGFVCFS(-7.03)S(7.03)PEEAT(-7.03)K 0 0 1 0 H0YB86;Q15164;H0YEU6;Q147Y3;Q3B867;H0YAR2;Q59GZ7;Q53GL4;A0A024R9E2;A0A087WTT1;H0Y5F5;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;B1ANR0;Q2VIP3;Q5VX58;Q3ZCS4;B3KT93;A0A024R9C1;Q6IQ30;Q4VXU2;Q9H361;P11940;Q13310 H0YB86 H0YB86 PABPC1;PABPC4;PABPC3;PABPC1L Polyadenylate-binding protein;Polyadenylate-binding protein 1-like;Polyadenylate-binding protein 3;Polyadenylate-binding protein 1;Polyadenylate-binding protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 871.8609 2 871.860221 1741.70589 68444.34 0.71728 0.00062536 -0.040666 -3.5455E-05 0.67661 0.00058991 871.860349516684 875.867275291144 119.89 0.45048 119.89 119.65 120.1 0 139 39 6 0 0 0 1.2986E-05 4 72102 80.96 75.419 3 1.6963 2.0117 0 8112300 3315800 4796500 2006 162 1049 1162 3222;3223;3224;3225 3224 253 GFGFVDFNSEEDAK 14 1 0 Phospho (STY) _GFGFVDFNS(ph)EEDAK_ GFGFVDFNS(1)EEDAK GFGFVDFNS(78.81)EEDAK 0 0 1 0 B3KM80;Q6ZS99;A0A024R4A0;P19338;H7BY16;Q9BQ02;B3KTP9 B3KM80 B3KM80 NCL Nucleolin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 821.3257 2 821.327068 1640.63958 67972.3 0.92994 0.00076379 0.33332 0.00027377 1.2633 0.0010376 821.326992425732 825.33526579996 116.49 0.68345 116.49 116.16 116.84 0 267 61 7 0 0 0 8.1017E-05 2 69470 78.814 61.788 1 0.65711 0.80724 0 21956000 13422000 8534200 2007 87 1050 1163 3226;3227 3226 114 GFGFVDFNSEEDAK 14 1 0 Phospho (STY) _GFGFVDFNS(ph)EEDAK_ GFGFVDFNS(1)EEDAK GFGFVDFNS(47.77)EEDAK 0 0 1 0 B3KM80;Q6ZS99;A0A024R4A0;P19338;H7BY16;Q9BQ02;B3KTP9 B3KM80 B3KM80 NCL Nucleolin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 825.3362 2 821.327068 1640.63958 67789.84 1.0909 0.00089597 0.19606 0.00016103 1.2869 0.001057 821.327317949031 825.33424127328 123.33 0.92345 123.33 122.83 123.75 0 371 86 6 0 0 0 0.0029785 1 79727 47.774 37.769 1 0.20835 0.16011 0 16679000 12770000 3909200 2008 87 1050 1163 3228 3228 114 GFGFVDFNSEEDAK 14 1 0 Unmodified _GFGFVDFNSEEDAK_ 0 0 0 0 B3KM80;Q6ZS99;A0A024R4A0;P19338;H7BY16;Q9BQ02;B3KTP9 B3KM80 B3KM80 NCL Nucleolin ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 785.3509 2 781.343903 1560.67325 NaN NaN NaN -0.45232 -0.00035342 NaN NaN NaN NaN 111.54 0.47177 111.54 111.27 111.75 -7.6294E-06 0 0 0 1.0554E-17 1 65898 108.7 79.97 1 NaN NaN 0 7754000 0 7754000 2009 87 1050 1164 3229 3229 GFSLEELR 8 0 1 Unmodified _GFSLEELR_ 0 0 0 0 J3QSB4;Q6NZ55;A8K4C8;P26373 J3QSB4 J3QSB4 RPL13 60S ribosomal protein L13 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 480.7552 2 475.750724 949.486896 91702.98 0.59346 0.00028234 0.011931 5.6761E-06 0.60539 0.00028801 475.75055892255 480.754754924535 105.86 0.74518 105.86 105.56 106.3 0 135 49 4 0 0 0 0.032461 1 61504 64.567 46.532 1 0.94639 1.0634 0 10347000 4699000 5648100 2010 459 1051 1165 3230 3230 GFSLLATEDK 10 1 0 Phospho (STY) _GFSLLAT(ph)EDK_ GFSLLAT(1)EDK GFS(-35.91)LLAT(35.91)EDK 0 0 1 0 B2R5W3;A0A024R3T8;P09874;B4E0E1;Q05D33;Q6PJL0;Q96P95 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 584.7728 2 580.765387 1159.51622 NaN NaN NaN NaN NaN NaN NaN NaN NaN 106.96 1 106.96 106.46 107.46 7.6294E-06 0 0 0 0.022319 1 68817 55.04 37.005 2 2011 81 1052 1166 3231 3231 2625 GFSSGSAVVSGGSR 14 0 1 Phospho (STY) _GFSSGS(ph)AVVSGGSR_ GFS(0.07)S(0.203)GS(0.725)AVVS(0.001)GGS(0.001)R GFS(-10.14)S(-5.52)GS(5.52)AVVS(-29.94)GGS(-29.41)R 0 0 1 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 667.7921 2 667.790456 1333.56636 NaN NaN NaN 0.47129 0.00031472 NaN NaN NaN NaN 51.706 0.95228 51.706 51.263 52.215 0 0 0 0 0.0064353 1 31151 41.967 33.054 5 NaN NaN 0 6709100 6709100 0 + 2012 758 1053 1167 3232 3232 1280 GGAAVDPDSGLEHSAHVLEK 20 1 0 Unmodified _GGAAVDPDSGLEHSAHVLEK_ 0 0 0 0 B2R5W3;A0A024R3T8;P09874;B4E0E1 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 498.2508 4 497.99726 1987.95993 85245.14 0.69631 0.00034676 -0.49852 -0.00024826 0.19779 9.8501E-05 497.997063946759 500.251270611343 107.99 1.6761 107.99 107.57 109.25 0 450 130 9 0 0 0 0.0070722 1 63568 23.196 13.408 1 0.64723 0.80516 0 80074000 43297000 36776000 2013 81 1054 1168 3233 3233 GGAAVDPDSGLEHSAHVLEK 20 1 0 Unmodified _GGAAVDPDSGLEHSAHVLEK_ 0 0 0 0 B2R5W3;A0A024R3T8;P09874;B4E0E1 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 666.9945 3 663.660587 1987.95993 74957.88 1.0727 0.00071192 -0.065402 -4.3405E-05 1.0073 0.00066852 663.994764361829 666.666085778293 107.99 1.2744 107.99 107.56 108.84 0 299 97 7 0 0 0 0.0059655 1 63831 24.594 24.594 1 0.68731 0.86022 0 62419000 39184000 23234000 2014 81 1054 1168 3234 3234 GGAAVDPDSGLEHSAHVLEK 20 1 0 Unmodified _GGAAVDPDSGLEHSAHVLEK_ 0 0 0 0 B2R5W3;A0A024R3T8;P09874;B4E0E1 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 663.6611 3 663.660587 1987.95993 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.16 1 108.16 107.66 108.66 7.6294E-06 0 0 0 5.5896E-05 1 63337 53.585 35.22 1 2015 81 1054 1168 3235 3235 GGDDHDDTSDSDSDGLTLK 19 1 0 Phospho (STY) _GGDDHDDTS(ph)DSDSDGLTLK_ GGDDHDDT(0.099)S(0.436)DS(0.436)DS(0.028)DGLT(0.001)LK GGDDHDDT(-6.43)S(0)DS(0)DS(-11.86)DGLT(-26.84)LK 0 0 1 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1015.881 2 1015.37894 2028.74333 60544.22 0.4831 0.00049053 0.070165 7.1244E-05 0.55326 0.00056177 1015.88047663368 1019.38596238857 52.06 1.65 52.06 51.462 53.112 0 870 150 8 0 0 0 0.00012334 1 31471 44.426 41.388 5 0.75954 0.49767 0 50833000 30084000 20748000 2016 1195 1055 1169 3236 3236 2367;2368 GGDLMAYDRR 10 0 2 Oxidation (M) _GGDLM(ox)AYDRR_ GGDLM(1)AYDRR GGDLM(51.35)AYDRR 0 1 0 1 Q5T6W2;B4DUQ1;B4DFF1;A0A024R228;Q5EC54;P61978;B3KU16 Q5T6W2 Q5T6W2 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 595.2808 2 585.272029 1168.52951 NaN NaN NaN -0.10887 -6.3719E-05 NaN NaN NaN NaN 66.627 0.3166 66.627 66.455 66.771 0 0 0 0 0.0049627 1 32507 51.346 23.172 1 NaN NaN 0 16628000 0 16628000 2017 56 1056 1170 3237 3237 12 GGEFDEFVNDDTDDDLPISK 20 1 0 Phospho (STY) _GGEFDEFVNDDT(ph)DDDLPISK_ GGEFDEFVNDDT(1)DDDLPISK GGEFDEFVNDDT(49.06)DDDLPIS(-49.06)K 0 0 1 0 A8K6X9;Q6PD62 A8K6X9 A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1154.4613 2 1154.46248 2306.9104 56057.89 0.38197 0.00044097 0.30505 0.00035217 0.68702 0.00079314 1154.96399767302 1158.97177938115 117.16 0.98814 117.16 116.7 117.69 0 657 88 11 0 0 0 1.9122E-46 2 70033 136.35 114.34 2 1.5283 1.8913 0 238060000 94955000 143100000 2018 486 1057 1171 3238;3239 3239 2749 GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR 31 0 1 Unmodified _GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR_ 0 0 0 0 H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRG2 H6VRG3;H6VRG2 H6VRG2 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1192.9807 2 1192.47956 2382.94457 NaN NaN NaN -0.1726 -0.00020582 NaN NaN NaN NaN 45.236 1.2966 45.236 44.583 45.88 0 0 0 0 4.4945E-06 1 17107 45.347 36.093 1 NaN NaN 0 26849000 26849000 0 + 2019 876;877 1058 1172 3240 3240 GGGHVAQIYAIR 12 0 1 Unmodified _GGGHVAQIYAIR_ 0 0 0 0 M0R210;P62249;M0QX76;M0R1M5;M0R3H0 M0R210 M0R210 RPS16 40S ribosomal protein S16 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 417.8994 3 414.563161 1240.66765 92592.54 1.2776 0.00052963 0.30831 0.00012781 1.5859 0.00065745 414.563215839466 417.899309052201 100.3 0.74664 100.3 99.775 100.52 0 206 58 5 0 0 0 0.0011585 2 57085 56.359 45.146 1 1.0344 1.3032 0 56438000 25657000 30781000 2020 914 1059 1173 3241;3242 3242 GGGHVAQIYAIR 12 0 1 Unmodified _GGGHVAQIYAIR_ 0 0 0 0 M0R210;P62249;M0QX76;M0R1M5;M0R3H0 M0R210 M0R210 RPS16 40S ribosomal protein S16 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 626.3464 2 621.341104 1240.66765 79405.13 1.8283 0.001136 0.16459 0.00010227 1.9929 0.0012382 621.341327682158 626.34525423931 100.41 0.5146 100.41 100.01 100.52 0 95 39 4 0 0 0 0.0038478 1 57357 77.732 68.544 1 0.90502 1.0712 0 14609000 6417300 8191400 2021 914 1059 1173 3243 3243 GGGHVAQIYAIR 12 0 1 Unmodified _GGGHVAQIYAIR_ 0 0 0 0 M0R210;P62249;M0QX76;M0R1M5;M0R3H0 M0R210 M0R210 RPS16 40S ribosomal protein S16 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 414.5636 3 414.563161 1240.66765 93139.35 1.0194 0.0004226 0.45236 0.00018753 1.4718 0.00061014 414.563263641353 417.89935893338 100.81 0.50694 100.81 100.5 101 7.6294E-06 197 36 8 0 0 0 0.00074318 2 57694 73.499 57.96 1 1.0188 1.2869 0 131090000 65043000 66047000 2022 914 1059 1173 3244;3245 3244 GGGHVAQIYAIR 12 0 1 Unmodified _GGGHVAQIYAIR_ 0 0 0 0 M0R210;P62249;M0QX76;M0R1M5;M0R3H0 M0R210 M0R210 RPS16 40S ribosomal protein S16 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 621.343 2 621.341104 1240.66765 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.17 1 100.17 99.675 100.67 7.6294E-06 0 0 0 0.00030853 1 57291 65.224 49.022 1 2023 914 1059 1173 3246 3246 GGHMDDGGYSMNFNMSSSR 19 0 1 3 Oxidation (M) _GGHM(ox)DDGGYSM(ox)NFNM(ox)SSSR_ GGHM(1)DDGGYSM(1)NFNM(1)SSSR GGHM(47.17)DDGGYSM(47.17)NFNM(47.17)SSSR 0 3 0 0 H0Y6E7;H3BT71;B4E352;P38159;Q2VIN3;Q96E39;A0A1B0GUK8 H0Y6E7 H0Y6E7 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 703.2646 3 699.928022 2096.76224 71558.65 0.83422 0.00058389 -0.71625 -0.00050132 0.11797 8.2572E-05 700.26198944137 703.264021524179 65.48 0.50154 65.48 65.219 65.721 0 216 37 9 0 0 0 7.4639E-05 1 31425 47.174 43.513 1 2.4395 3.0784 0 72365000 21409000 50956000 2024 684 1060 1174 3247 3247 176;177;178 GGLLTSEEDSGFSTSPK 17 1 0 Phospho (STY) _GGLLTSEEDSGFST(ph)SPK_ GGLLTSEEDS(0.002)GFS(0.141)T(0.572)S(0.285)PK GGLLT(-111.24)S(-89.44)EEDS(-24.13)GFS(-6.07)T(3.03)S(-3.03)PK 0 0 1 0 Q8IWK7;Q4FD37;Q8TDH4;B2RAI2;Q9UQR1 Q8IWK7 Q8IWK7 ZNF148 Zinc finger protein 148 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 900.3961 2 896.387854 1790.76115 NaN NaN NaN -0.30283 -0.00027145 NaN NaN NaN NaN 94.65 0.67038 94.65 94.185 94.855 0 0 0 0 6.03E-52 1 52817 137.79 104.78 6 NaN NaN 0 20004000 0 20004000 2025 546 1061 1175 3248 3248 905;2761 GGLLTSEEDSGFSTSPK 17 1 0 Phospho (STY) _GGLLTSEEDSGFS(ph)TSPK_ GGLLTSEEDS(0.001)GFS(0.383)T(0.383)S(0.232)PK GGLLT(-67.29)S(-53.76)EEDS(-24.23)GFS(0)T(0)S(-2.17)PK 0 0 1 0 Q8IWK7;Q4FD37;Q8TDH4;B2RAI2;Q9UQR1 Q8IWK7 Q8IWK7 ZNF148 Zinc finger protein 148 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 896.3896 2 896.387854 1790.76115 64618.65 1.2092 0.0010839 0.56812 0.00050926 1.7773 0.0015932 896.388538155281 900.395429864129 99.108 0.95267 99.108 98.604 99.556 0 529 90 8 0 0 0 2.1277E-09 1 63862 84.718 84.718 6 0.60056 0.39444 0 31101000 20031000 11070000 2026 546 1061 1175 3249 3249 905;2761 GGNLPPVSPNDSGAK 15 1 0 Phospho (STY) _GGNLPPVS(ph)PNDSGAK_ GGNLPPVS(0.929)PNDS(0.071)GAK GGNLPPVS(11.18)PNDS(-11.18)GAK 0 0 1 0 Q9UK61;A0A024R363;A0A087X0F1 Q9UK61 Q9UK61 FAM208A;C3orf63 Protein FAM208A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 749.3453 2 745.33777 1488.66099 70511.7 0.87597 0.00065289 0.058213 4.3388E-05 0.93418 0.00069628 745.33770644775 749.344939117515 60.138 1.6414 60.138 59.384 61.025 3.8147E-06 640 118 7 0 0 0 0.0010628 2 27105 59.709 42.683 2 0.92955 1.1612 0 66770000 34215000 32555000 2027 1234 1062 1176 3250;3251 3251 2519 GGNLPPVSPNDSGAK 15 1 0 Phospho (STY) _GGNLPPVS(ph)PNDSGAK_ GGNLPPVS(0.953)PNDS(0.047)GAK GGNLPPVS(13.05)PNDS(-13.05)GAK 0 0 1 0 Q9UK61;A0A024R363;A0A087X0F1 Q9UK61 Q9UK61 FAM208A;C3orf63 Protein FAM208A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 745.3382 2 745.33777 1488.66099 69815.38 1.1194 0.0008343 0.43169 0.00032176 1.5511 0.0011561 745.337802512769 749.846208572366 55.548 2.0871 55.548 54.476 56.563 0 993 181 7 0 0 0 0.00062853 1 33945 67.136 44.018 2 1.326 0.86301 0 40054000 21416000 18637000 2028 1234 1062 1176 3252 3252 2519 GGPASPGGLQGLETR 15 0 1 Phospho (STY) _GGPAS(ph)PGGLQGLETR_ GGPAS(1)PGGLQGLETR GGPAS(54.36)PGGLQGLET(-54.36)R 0 0 1 0 C9JWC4;Q8NCD3 C9JWC4 C9JWC4 HJURP Holliday junction recognition protein MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 743.8499 2 738.845762 1475.67697 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.741 1 83.741 83.241 84.241 0 0 0 0 3.5852E-07 1 44979 71.781 59.013 2 2029 748 1063 1177 3253 3253 1260 GGPASPGGLQGLETR 15 0 1 Phospho (STY) _GGPAS(ph)PGGLQGLETR_ GGPAS(0.999)PGGLQGLET(0.001)R GGPAS(31.04)PGGLQGLET(-31.04)R 0 0 1 0 C9JWC4;Q8NCD3 C9JWC4 C9JWC4 HJURP Holliday junction recognition protein MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 744.3384 2 738.845762 1475.67697 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.364 1 84.364 83.864 84.864 0 0 0 0 0.0038827 1 45403 42.813 32.505 2 2030 748 1063 1177 3254 3254 1260 GGPASPGGLQGLETR 15 0 1 Phospho (STY) _GGPAS(ph)PGGLQGLETR_ GGPAS(1)PGGLQGLETR GGPAS(45.08)PGGLQGLET(-45.08)R 0 0 1 0 C9JWC4;Q8NCD3 C9JWC4 C9JWC4 HJURP Holliday junction recognition protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 738.8472 2 738.845762 1475.67697 72475.38 1.017 0.00075144 0.94863 0.00070089 1.9657 0.0014523 738.846434801251 743.850261801604 86.564 0.61058 86.564 86.239 86.849 0 242 55 6 0 0 0 0.00096993 1 55580 63.681 54.492 2 1.1555 0.86598 0 21133000 9799900 11333000 2031 748 1063 1177 3255 3255 1260 GGPGSGGHGPLR 12 0 1 Phospho (STY) _GGPGS(ph)GGHGPLR_ GGPGS(1)GGHGPLR GGPGS(44.43)GGHGPLR 0 0 1 0 Q8N1G0 Q8N1G0 Q8N1G0 ZNF687 Zinc finger protein 687 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 564.7508 2 564.750937 1127.48732 NaN NaN NaN -0.32205 -0.00018188 NaN NaN NaN NaN 47.959 0.80037 47.959 47.498 48.298 3.8147E-06 0 0 0 0.012957 1 18603 44.426 32.695 1 NaN NaN 0 2934000 2934000 0 2032 1150 1064 1178 3256 3256 2216 GGPPFAFVEFEDPRDAEDAVYGR 23 0 2 Unmodified _GGPPFAFVEFEDPRDAEDAVYGR_ 0 0 0 1 J3KTL2;Q07955;Q59FA2 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 854.7344 3 847.727549 2540.16082 67808.59 0.87194 0.00073917 0.035228 2.9864E-05 0.90717 0.00076903 847.727196977192 854.733908488924 133.4 0.11394 133.4 133.33 133.45 0 19 5 5 0 0 0 1.3206E-07 1 81224 53.553 53.553 1 1.1302 1.3748 0 19264000 9444600 9819700 2033 895 1065 1179 3257 3257 GGPSPGDVEAIK 12 1 0 Phospho (STY) _GGPS(ph)PGDVEAIK_ GGPS(1)PGDVEAIK GGPS(57.43)PGDVEAIK 0 0 1 0 H0YLR3;H0YMA0;Q53G61;Q53G21;P09661 H0YLR3 H0YLR3 SNRPA1 U2 small nuclear ribonucleoprotein A ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 603.7731 2 603.773743 1205.53293 NaN NaN NaN 0.93571 0.00056496 NaN NaN NaN NaN 71.946 0.39364 71.946 71.761 72.155 0 0 0 0 0.0024718 1 36281 57.434 28.094 1 NaN NaN 0 7944500 7944500 0 2034 862 1066 1180 3258 3258 1468 GGPSPGDVEAIK 12 1 0 Phospho (STY) _GGPS(ph)PGDVEAIK_ GGPS(1)PGDVEAIK GGPS(45.28)PGDVEAIK 0 0 1 0 H0YLR3;H0YMA0;Q53G61;Q53G21;P09661 H0YLR3 H0YLR3 SNRPA1 U2 small nuclear ribonucleoprotein A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 608.2964 2 603.773743 1205.53293 82818.48 0.94098 0.00056814 0.31026 0.00018733 1.2512 0.00075547 603.773853674101 607.78090398443 72.109 0.71696 72.109 71.729 72.446 0 206 66 6 0 0 0 0.011119 1 45725 45.28 16.881 1 0.70226 0.5266 0 8271000 4898100 3372900 2035 862 1066 1180 3259 3259 1468 GGRGSPYRPDPGR 13 0 3 Phospho (STY) _GGRGS(ph)PYRPDPGR_ GGRGS(0.995)PY(0.005)RPDPGR GGRGS(22.86)PY(-22.86)RPDPGR 0 0 1 2 A0A0A8K8F0 A0A0A8K8F0 A0A0A8K8F0 URLC10 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 494.5648 3 484.556168 1450.64667 85368.82 0.6007 0.00029107 -0.4304 -0.00020855 0.1703 8.2521E-05 484.556030301289 494.564284705945 17.068 0.30545 17.068 16.877 17.182 0 43 10 7 0 0 0 0.001183 2 4317 64.507 41.705 2 0.65943 0.75825 0 23590000 13515000 10075000 2036 306 1067 1181 3260;3261 3260 488 GGRSPDEVTLTSIVPTR 17 0 2 Phospho (STY) _GGRS(ph)PDEVTLTSIVPTR_ GGRS(0.959)PDEVT(0.038)LT(0.002)S(0.001)IVPTR GGRS(14.05)PDEVT(-14.05)LT(-26.27)S(-31.42)IVPT(-40.51)R 0 0 1 1 A0A0C4DGG1;B4DUI2;D3DQR0;Q9UKS6;H0YDM6 A0A0C4DGG1 A0A0C4DGG1 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 622.645 3 622.310329 1863.90916 79312.57 0.68074 0.00042363 -0.47511 -0.00029567 0.20562 0.00012796 622.310243168371 628.982231746607 109.91 0.81149 109.91 109.55 110.36 0 304 64 7 0 0 0 0.00037696 1 64570 40.52 40.52 5 0.63689 0.78287 0 26697000 16162000 10535000 2037 322 1068 1182 3262 3262 505 GGSDDSSKDPIDVNYEK 17 2 0 Phospho (STY) _GGS(ph)DDSSKDPIDVNYEK_ GGS(0.994)DDS(0.006)SKDPIDVNYEK GGS(22.4)DDS(-22.4)S(-35.5)KDPIDVNY(-127.3)EK 0 0 1 1 B2R5W3;A0A024R3T8;P09874;B4E0E1 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 961.907 2 953.391125 1904.7677 62615.12 0.52596 0.00050145 -0.39287 -0.00037456 0.1331 0.00012689 953.389980651512 961.40528489064 70.972 1.371 70.972 70.112 71.483 0 666 134 7 0 0 0 2.2074E-43 2 35455 141.86 126.32 4 0.59223 0.76123 0 113980000 68844000 45140000 2038 81 1069 1183 3263;3264 3263 105 GGSDDSSKDPIDVNYEK 17 2 0 Phospho (STY) _GGS(ph)DDSSKDPIDVNYEK_ GGS(0.804)DDS(0.093)S(0.102)KDPIDVNYEK GGS(8.96)DDS(-9.36)S(-8.96)KDPIDVNY(-41.48)EK 0 0 1 1 B2R5W3;A0A024R3T8;P09874;B4E0E1 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 636.2645 3 635.929842 1904.7677 76186.16 1.1258 0.00071595 -0.24664 -0.00015684 0.8792 0.00055911 635.929800375839 641.27256298878 60.487 1.4177 60.487 59.707 61.124 0 752 133 8 0 0 0 0.00028249 1 37504 41.911 33.822 4 1.1148 0.86649 0 39864000 18025000 21839000 2039 81 1069 1183 3265 3265 105 GGSDDSSKDPIDVNYEK 17 2 0 Phospho (STY) _GGS(ph)DDSSKDPIDVNYEK_ GGS(0.991)DDS(0.009)SKDPIDVNYEK GGS(20.6)DDS(-20.6)S(-36.12)KDPIDVNY(-154.91)EK 0 0 1 1 B2R5W3;A0A024R3T8;P09874;B4E0E1 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 953.3932 2 953.391125 1904.7677 61786.3 0.80425 0.00076677 0.33925 0.00032344 1.1435 0.0010902 953.39132350063 961.405966477071 60.419 2.1702 60.419 59.429 61.599 0 1692 204 12 0 0 0 2.1392E-61 1 37610 159.26 150.22 4 1.1667 0.85916 0 323030000 150840000 172190000 2040 81 1069 1183 3266 3266 105 GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK 40 1 0 Unmodified _GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK_ 0 0 0 0 CON__P35527;P35527;K7EQQ3 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1075.4359 3 1075.09871 3222.2743 NaN NaN NaN -0.18181 -0.00019546 NaN NaN NaN NaN 63.491 1.1763 63.491 63.166 64.342 0 0 0 0 1.6579E-132 1 29780 147.43 138.85 1 NaN NaN 0 520860000 520860000 0 + 2041 757 1070 1184 3267 3267 GGSISVQVNSIKFDSE 16 1 0 Phospho (STY) _GGSISVQVNSIKFDS(ph)E_ GGSISVQVNSIKFDS(1)E GGS(-103.17)IS(-75.08)VQVNS(-39.11)IKFDS(39.11)E 0 0 1 1 B2RAU8;A0A0A0MRM9;Q14978;Q96J17 B2RAU8 B2RAU8 NOLC1 Nucleolar and coiled-body phosphoprotein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 873.9021 2 873.900931 1745.78731 64265.39 0.86687 0.00075756 0.69782 0.00060982 1.5647 0.0013674 873.900859693561 877.908079047374 108.29 0.62109 108.29 107.82 108.44 -7.6294E-06 305 47 11 0 0 0 2.3458E-30 1 63276 126.63 99.956 4 1.4873 1.8397 0 289580000 120240000 169340000 2042 287 1071 1185 3268 3268 454 GGSISVQVNSIKFDSE 16 1 0 Phospho (STY) _GGSISVQVNSIKFDS(ph)E_ GGSISVQVNS(0.035)IKFDS(0.965)E GGS(-49.44)IS(-42.61)VQVNS(-14.41)IKFDS(14.41)E 0 0 1 1 B2RAU8;A0A0A0MRM9;Q14978;Q96J17 B2RAU8 B2RAU8 NOLC1 Nucleolar and coiled-body phosphoprotein 1 MULTI-SECPEP 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 878.4272 2 873.900931 1745.78731 65645.16 1.0979 0.00095942 -0.12617 -0.00011026 0.97168 0.00084915 873.900927847366 877.908057678714 114.87 1.0733 114.87 114.45 115.53 7.6294E-06 666 100 10 0 0 0 0.0023124 1 73748 54.319 54.319 4 2.1918 1.4645 0 201490000 61461000 140030000 2043 287 1071 1185 3269 3269 454 GGTSQVGSPTLLSPAVPSK 19 1 0 Phospho (STY) _GGTSQVGS(ph)PTLLSPAVPSK_ GGT(0.002)S(0.007)QVGS(0.788)PT(0.191)LLS(0.012)PAVPSK GGT(-26.53)S(-20.48)QVGS(6.17)PT(-6.17)LLS(-18.07)PAVPS(-44.62)K 0 0 1 0 Q8IY92 Q8IY92 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 935.9758 2 931.966606 1861.91866 64995.87 1.4981 0.0013962 0.047836 4.4582E-05 1.546 0.0014408 931.966459518253 935.973843838729 100.92 0.68546 100.92 100.53 101.22 0 182 50 5 0 0 0 7.1382E-08 3 57832 63.691 55.281 6 1.1196 1.3699 0 19806000 11558000 8247700 2044 1148 1072 1186 3270;3271;3272 3271 2202;2203 GGTSQVGSPTLLSPAVPSK 19 1 0 2 Phospho (STY) _GGTSQVGS(ph)PTLLS(ph)PAVPSK_ GGT(0.043)S(0.29)QVGS(0.636)PT(0.031)LLS(1)PAVPSK GGT(-11.66)S(-3.4)QVGS(3.4)PT(-13.18)LLS(32.54)PAVPS(-46)K 0 0 2 0 Q8IY92 Q8IY92 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 975.959 2 971.949771 1941.88499 61864.11 1.2798 0.0012439 -0.82337 -0.00080028 0.45647 0.00044367 971.949499970368 975.95639684881 102.43 0.94498 102.43 101.89 102.83 0 311 72 6 0 0 0 5.9977E-19 2 59059 100.67 82.871 15 0.87376 1.1051 0 44822000 23108000 21713000 2045 1148 1072 1187 3273;3274 3273 2202;2203 GHAGSVDSIAVDGSGTK 17 1 0 Unmodified _GHAGSVDSIAVDGSGTK_ 0 0 0 0 Q53T99;Q9GZL7 Q53T99 Q53T99 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 522.593 3 519.921631 1556.74306 85919.8 0.4003 0.00020812 -0.22901 -0.00011907 0.17129 8.9059E-05 519.921598862903 522.592913627448 78.572 0.73707 78.572 78.247 78.984 0 214 65 5 0 0 0 2.073E-07 2 41206 79.471 68.837 1 0.95827 1.2088 0 30374000 11323000 19051000 2046 1091 1073 1188 3275;3276 3276 GHALLILRPEELGFLR 16 0 2 Unmodified _GHALLILRPEELGFLR_ 0 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 619.0358 3 612.028106 1833.06249 83994.72 0.87693 0.0005367 0.45268 0.00027705 1.3296 0.00081376 612.028014469619 619.035417356779 132.27 0.10132 132.27 132.2 132.3 0 24 9 4 0 0 0 0.029439 1 85340 29.341 29.341 1 0.76788 0.74072 0 1739200 912860 826340 2047 182 1074 1189 3277 3277 GHAVGDIPGVR 11 0 1 Unmodified _GHAVGDIPGVR_ 0 0 0 0 A8K517;P62266;D6RD47 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 544.2983 2 539.293622 1076.57269 81736.44 0.78864 0.00042531 0.15933 8.5925E-05 0.94797 0.00051123 539.293704359576 544.297776076082 94.162 1.6305 94.162 93.461 95.092 0 780 132 8 0 0 0 2.758E-34 4 52800 159.58 136.51 1 0.77664 0.9843 0 826640000 465150000 361490000 2048 469 1075 1190 3278;3279;3280;3281 3281 GHAVGDIPGVR 11 0 1 Unmodified _GHAVGDIPGVR_ 0 0 0 0 A8K517;P62266;D6RD47 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 363.201 3 359.86484 1076.57269 97086.12 0.16748 6.027E-05 0.3149 0.00011332 0.48238 0.00017359 359.864934255599 363.200980873947 94.181 1.4645 94.181 93.498 94.962 0 651 118 7 0 0 0 8.0557E-06 4 52299 70.552 62.327 1 0.78065 0.98805 0 388920000 222590000 166330000 2049 469 1075 1190 3282;3283;3284;3285 3283 GHAVGDIPGVR 11 0 1 Unmodified _GHAVGDIPGVR_ 0 0 0 0 A8K517;P62266;D6RD47 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 539.2941 2 539.293622 1076.57269 83631.23 1.0321 0.00055661 0.4197 0.00022634 1.4518 0.00078295 539.293783598036 544.297799177386 51.214 1.278 51.214 50.474 51.752 3.8147E-06 301 113 4 0 0 0 0.015579 2 31154 68.016 68.016 1 1.5242 1.2217 0 8424400 3867900 4556500 2050 469 1075 1190 3286;3287 3287 GHLENNPALEK 11 1 0 Unmodified _GHLENNPALEK_ 0 0 0 0 F8VPE8;F8VW21;F8VU65;Q53HW2;Q53HK9;A8K4Z4;A0A024RBS2;Q8NHW5;P05388;F8VWV4;F8VS58;F8VQY6;F8VRK7;G3V210;F8VZS0;Q6NSF2;F8VWS0 F8VPE8 F8VPE8 RPLP0;RPLP0P6 60S acidic ribosomal protein P0-like;60S acidic ribosomal protein P0 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 611.3151 2 611.314751 1220.61495 78527.86 0.5275 0.00032247 0.084786 5.1831E-05 0.61229 0.0003743 611.314707569746 615.321894038962 74.803 1.7734 74.803 73.539 75.313 0 626 156 5 0 0 0 6.9282E-45 4 38238 168.3 120.7 1 0.98848 1.2336 0 69083000 32433000 36650000 2051 203 1076 1191 3288;3289;3290;3291 3290 GHLENNPALEK 11 1 0 Unmodified _GHLENNPALEK_ 0 0 0 0 F8VPE8;F8VW21;F8VU65;Q53HW2;Q53HK9;A8K4Z4;A0A024RBS2;Q8NHW5;P05388;F8VWV4;F8VS58;F8VQY6;F8VRK7;G3V210;F8VZS0;Q6NSF2;F8VWS0 F8VPE8 F8VPE8 RPLP0;RPLP0P6 60S acidic ribosomal protein P0-like;60S acidic ribosomal protein P0 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 615.3225 2 611.314751 1220.61495 78887.29 0.45096 0.00027568 0.21657 0.00013239 0.66753 0.00040807 611.314762132603 615.321964670648 21.787 0.26511 21.787 21.658 21.923 0 60 13 6 0 0 0 7.2344E-15 1 8520 138.25 90.644 1 1.0148 0.78816 0 15166000 7761100 7404700 2052 203 1076 1191 3292 3292 GHLLGR 6 0 1 Unmodified _GHLLGR_ 0 0 0 0 Q9BSQ6;Q5QTS3;Q53H34;M0QYS1;P40429;M0QZU1;A0A096LPE0;B4DNC8 Q9BSQ6 Q9BSQ6 RPL13A 60S ribosomal protein L13a MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 326.6982 2 326.698098 651.381643 104737.1 -0.17596 -5.7484E-05 0.4758 0.00015544 0.29984 9.7957E-05 326.698156743041 331.702281163407 80.184 1.2203 80.184 79.673 80.893 0 480 112 6 0 0 0 0.020141 1 42382 96.839 10.212 1 0.89378 1.1309 0 333750000 161210000 172540000 2053 910 1077 1192 3293 3293 GHLSRPEAQSLSPYTTSANR 20 0 2 Phospho (STY) _GHLSRPEAQSLS(ph)PYTTSANR_ GHLSRPEAQS(0.003)LS(0.988)PYT(0.007)T(0.002)S(0.001)ANR GHLS(-49.84)RPEAQS(-25.64)LS(21.7)PY(-41.92)T(-21.7)T(-26.94)S(-32.09)ANR 0 0 1 1 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 758.3615 3 751.353368 2251.03827 69678.17 1.2751 0.00095804 -0.020372 -1.5307E-05 1.2547 0.00094273 751.687712850793 758.359869440165 93.216 1.1691 93.216 92.668 93.837 7.6294E-06 668 96 9 0 0 0 2.318E-18 3 52162 97.94 91.974 7 0.62062 0.77459 0 187630000 120460000 67168000 2054 101 1078 1193 3294;3295;3296 3295 135 GHLSRPEAQSLSPYTTSANR 20 0 2 Phospho (STY) _GHLSRPEAQSLS(ph)PYTTSANR_ GHLS(0.076)RPEAQS(0.183)LS(0.673)PY(0.047)T(0.014)T(0.005)S(0.002)ANR GHLS(-9.49)RPEAQS(-5.65)LS(5.65)PY(-11.58)T(-16.79)T(-21.15)S(-25.2)ANR 0 0 1 1 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 564.0167 4 563.766845 2251.03827 79796.27 1.1377 0.00064142 -0.34214 -0.00019289 0.79559 0.00044853 564.017523037536 569.021649912938 93.216 0.95412 93.216 92.801 93.755 0 365 78 7 0 0 0 5.7905E-05 1 51671 40.086 34.993 7 0.64004 0.79559 0 70698000 44361000 26336000 2055 101 1078 1193 3297 3297 135 GHLSRPEAQSLSPYTTSANR 20 0 2 Phospho (STY) _GHLSRPEAQSLS(ph)PYTTSANR_ GHLS(0.004)RPEAQS(0.009)LS(0.958)PY(0.001)T(0.018)T(0.005)S(0.006)ANR GHLS(-24.34)RPEAQS(-20.51)LS(17.34)PY(-31.59)T(-17.34)T(-22.73)S(-22.02)ANR 0 0 1 1 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 751.3548 3 751.353368 2251.03827 69015.09 0.97344 0.0007314 0.020742 1.5584E-05 0.99418 0.00074698 751.687609362069 758.025494312163 64.714 1.4392 64.714 64.072 65.511 0 910 128 9 0 0 0 1.0404E-07 2 40129 59.661 59.661 7 1.5807 1.3768 0 123140000 49925000 73212000 2056 101 1078 1193 3298;3299 3298 135 GHLSRPEAQSLSPYTTSANR 20 0 2 Unmodified _GHLSRPEAQSLSPYTTSANR_ 0 0 0 1 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 544.0256 4 543.775262 2171.07194 83684.95 0.59363 0.0003228 0.086714 4.7153E-05 0.68034 0.00036995 544.02580061707 548.779465606723 109.06 0.6045 109.06 108.76 109.36 7.6294E-06 136 48 4 0 0 0 0.00011632 1 63993 38.878 38.878 1 0.91416 1.1086 0 17995000 11028000 6966800 2057 101 1078 1194 3300 3300 GHSCYRPR 8 0 2 Unmodified _GHSCYRPR_ 0 0 0 1 Q96DV6;A2A3R6;P62753;A2A3R5;Q9BZU1;D3DRJ5 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 344.831 3 344.831254 1031.47193 100879 -0.16355 -5.6399E-05 0.11675 4.0259E-05 -0.046804 -1.614E-05 344.831264573702 351.503435438357 74.857 5.907 74.857 72.709 78.616 0 1738 519 4 0 0 0 0.00092984 5 38258 123.69 111.45 1 0.71749 0.89548 0 187500000 106540000 80960000 2058 405 1079 1195 3301;3302;3303;3304;3305 3303 GHVAHLEDDEGDDDESK 17 1 0 Unmodified _GHVAHLEDDEGDDDESK_ 0 0 0 0 F5H5A3;A8K602;Q8IVH8 F5H5A3 F5H5A3 MAP4K3 Mitogen-activated protein kinase kinase kinase kinase;Mitogen-activated protein kinase kinase kinase kinase 3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 625.9296 3 623.257408 1866.75039 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.414 1 79.414 78.914 79.914 0 0 0 0 0.015806 1 41853 39.531 34.817 1 2059 477 1080 1196 3306 3306 GHYTEGAELVDSVLDVVR 18 0 1 Unmodified _GHYTEGAELVDSVLDVVR_ 0 0 0 0 B7ZAF0;Q5JP53;Q6LC01;Q5SU16;P07437;Q5ST81;B7ZAK1;B4DMJ5;Q8N6N5;Q8IZ29;Q8IWP6;P68371;O43209;A0A024QZU2;B2R6L0;Q9BVA1;Q13885;A1L195;G3V2A3;A5D907;A5D906;Q3ZCR3;Q9BV28;Q2NKY5;Q53G92;B2RBD5;A0A0B4J269;Q13509 B7ZAF0 B7ZAF0 TUBB;TUBB2C;TUBB4B;TUBB2B;TUBB2A;TUBB3;TUBB6 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-3 chain MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 657.0026 3 653.66545 1957.97452 75954.51 1.2083 0.00078981 -0.4135 -0.00027029 0.79478 0.00051952 653.999571219046 657.335502665669 134.45 0.15833 134.45 134.36 134.51 0 47 9 8 0 0 0 4.8381E-05 2 86730 48.288 44.627 1 1.0751 0.85891 0 8831100 4120800 4710300 2060 718 1081 1197 3307;3308 3307 GIDSDDVQDNSQLK 14 1 0 Phospho (STY) _GIDSDDVQDNS(ph)QLK_ GIDS(0.001)DDVQDNS(0.999)QLK GIDS(-29.68)DDVQDNS(29.68)QLK 0 0 1 0 H0UIC2;A0A075B754;Q96QE3 H0UIC2 H0UIC2 ATAD5 ATPase family AAA domain-containing protein 5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 811.345 2 807.338164 1612.66178 69048.52 0.78673 0.00063516 -0.1374 -0.00011093 0.64934 0.00052423 807.338242910869 811.344807150221 55.723 0.85236 55.723 55.245 56.097 3.8147E-06 189 68 4 0 0 0 0.0049009 1 23881 41.743 30.913 2 0.7826 0.9282 0 8832400 4218900 4613500 2061 241 1082 1198 3309 3309 369 GIDSDDVQDNSQLK 14 1 0 Phospho (STY) _GIDSDDVQDNS(ph)QLK_ GIDSDDVQDNS(1)QLK GIDS(-42.65)DDVQDNS(42.65)QLK 0 0 1 0 H0UIC2;A0A075B754;Q96QE3 H0UIC2 H0UIC2 ATAD5 ATPase family AAA domain-containing protein 5 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 811.3464 2 807.338164 1612.66178 NaN NaN NaN 0.5119 0.00041328 NaN NaN NaN NaN 51.47 0.75164 51.47 51.161 51.913 0 0 0 0 0.0016996 1 31217 51.03 37.261 2 NaN NaN 0 6221700 0 6221700 2062 241 1082 1198 3310 3310 369 GIFTSPTNSQQLYR 14 0 1 Phospho (STY) _GIFT(ph)SPTNSQQLYR_ GIFT(0.489)S(0.489)PT(0.021)NS(0.001)QQLYR GIFT(0)S(0)PT(-13.58)NS(-25.85)QQLY(-49.46)R 0 0 1 0 Q14865 Q14865 Q14865 ARID5B AT-rich interactive domain-containing protein 5B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 846.8956 2 846.393077 1690.7716 66326.26 0.71132 0.00060206 -0.098307 -8.3206E-05 0.61302 0.00051885 846.894623393214 851.39731076205 103.83 1.0662 103.83 103.31 104.38 0 173 80 5 0 0 0 0.020772 1 60144 57.348 45.203 5 1.205 1.4458 0 17654000 5490500 12164000 2063 1065 1083 1199 3311 3311 2003;2929 GIGTPPNTTPIK 12 1 0 2 Phospho (STY) _GIGT(ph)PPNTT(ph)PIK_ GIGT(1)PPNT(0.26)T(0.74)PIK GIGT(63.2)PPNT(-4.55)T(4.55)PIK 0 0 2 0 O96028;Q05CW4;D6R9V2;D6RIS1 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 682.3111 2 678.304026 1354.5935 73651.47 0.71628 0.00048585 0.076814 5.2103E-05 0.79309 0.00053796 678.304040643111 682.311119106504 76.45 1.6666 76.45 75.606 77.273 7.6294E-06 867 145 8 0 0 0 7.8468E-15 4 39617 118.24 104.01 3 0.70129 0.86735 0 309060000 183410000 125650000 2064 953 1084 1200 3312;3313;3314;3315 3314 2862;2863;2864 GIGTPPNTTPIK 12 1 0 2 Phospho (STY) _GIGT(ph)PPNT(ph)TPIK_ GIGT(1)PPNT(0.555)T(0.445)PIK GIGT(42.67)PPNT(0.95)T(-0.95)PIK 0 0 2 0 O96028;Q05CW4;D6R9V2;D6RIS1 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 678.3049 2 678.304026 1354.5935 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.617 1 75.617 75.117 76.117 0 0 0 0 0.00069252 1 38976 61.11 36.685 3 2065 953 1084 1200 3316 3316 2862;2863;2864 GIGTPPNTTPIK 12 1 0 Phospho (STY) _GIGT(ph)PPNTTPIK_ GIGT(0.976)PPNT(0.012)T(0.012)PIK GIGT(19.15)PPNT(-19.15)T(-19.15)PIK 0 0 1 0 O96028;Q05CW4;D6R9V2;D6RIS1 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 638.3224 2 638.32086 1274.62717 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.063 1 76.063 75.563 76.563 0 0 0 0 0.0020436 1 39313 61.235 42.453 3 2066 953 1084 1201 3317 3317 2862;2863;2864 GIKKGGVTENTSYYIF 16 2 0 2 Phospho (STY) _GIKKGGVTENT(ph)S(ph)YYIF_ GIKKGGVT(0.126)ENT(0.551)S(0.548)Y(0.388)Y(0.388)IF GIKKGGVT(-6.8)ENT(0)S(0)Y(0)Y(0)IF 0 0 2 2 M0R0Z3 M0R0Z3 M0R0Z3 GTF2F1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 976.9407 2 968.928307 1935.84206 61167.92 0.588 0.00056973 -1.3247 -0.0012836 -0.73672 -0.00071382 969.428362194312 977.443015318603 115.47 4.4483 115.47 113.72 118.17 0 2602 395 10 0 0 0 0.00019871 1 68960 43.813 33.437 10 0.76311 1.0324 0 703510000 392890000 310620000 2067 913 1085 1202 3318 3318 1536;2842;3021;3022 GILHLSPDVYQEMEASR 17 0 1 Oxidation (M),Phospho (STY) _GILHLS(ph)PDVYQEM(ox)EASR_ GILHLSPDVYQEM(1)EASR GILHLS(0.988)PDVY(0.012)QEMEASR GILHLSPDVYQEM(42.38)EASR GILHLS(19.05)PDVY(-19.05)QEMEAS(-42.23)R 0 1 1 0 E5RJN7;A0A0A0MTC4;A0A0A0MTD1;Q2TBD5;F8VPI7;Q4LE57;E7EPX0;A0A0A0MTC6;E7EVJ4;E9PH62;A0A0A0MTC5;A0A024R7X7;Q9NUL3;E5RJ67;H0YBY0;G5EA18 E5RJN7 E5RJN7 STAU2;STAU2 variant protein Double-stranded RNA-binding protein Staufen homolog 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 681.6419 3 680.974729 2039.90236 74831.59 0.81232 0.00055317 0.051379 3.4988E-05 0.8637 0.00058816 681.309026692955 684.310994793666 107.98 0.67631 107.98 107.61 108.29 0 186 49 7 0 0 0 0.0023848 1 63230 42.382 35.733 3 1.2324 1.4932 0 19808000 9460200 10347000 2068 143 1086 1203 3319 3319 30 216 GIPHLVTHDAR 11 0 1 Unmodified _GIPHLVTHDAR_ 0 0 0 0 Q96IR1;C9JEH7;A4FU11;Q53HV1;Q496E4;B2R491;P62701;P22090;Q53HI6;Q8TD47 Q96IR1 Q96IR1 RPS4X;RPS4Y1;RPS4Y2 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1;40S ribosomal protein S4, Y isoform 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 405.8912 3 405.891278 1214.652 93752.85 -0.14353 -5.8258E-05 0.13539 5.4955E-05 -0.0081358 -3.3023E-06 405.891335798669 409.227337510089 114.99 4.3711 114.99 112.85 117.22 0 1629 390 7 0 0 0 2.7026E-11 9 68722 126.71 123.51 1 1.0617 1.3417 0 165170000 83153000 82019000 2069 421 1087 1204 3320;3321;3322;3323;3324;3325;3326;3327;3328 3325 GIPHLVTHDAR 11 0 1 Unmodified _GIPHLVTHDAR_ 0 0 0 0 Q96IR1;C9JEH7;A4FU11;Q53HV1;Q496E4;B2R491;P62701;P22090;Q53HI6;Q8TD47 Q96IR1 Q96IR1 RPS4X;RPS4Y1;RPS4Y2 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1;40S ribosomal protein S4, Y isoform 2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 608.3339 2 608.333279 1214.652 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.07 1 115.07 114.57 115.57 0 0 0 0 0.0049794 1 68605 64.297 42.834 1 2070 421 1087 1204 3329 3329 GIPHLVTHDAR 11 0 1 Unmodified _GIPHLVTHDAR_ 0 0 0 0 Q96IR1;C9JEH7;A4FU11;Q53HV1;Q496E4;B2R491;P62701;P22090;Q53HI6;Q8TD47 Q96IR1 Q96IR1 RPS4X;RPS4Y1;RPS4Y2 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1;40S ribosomal protein S4, Y isoform 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 409.2275 3 405.891278 1214.652 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.25 1 118.25 117.75 118.75 -7.6294E-06 0 0 0 0.027033 1 70937 45.915 37.402 1 2071 421 1087 1204 3330 3330 GIPHLVTHDAR 11 0 1 Unmodified _GIPHLVTHDAR_ 0 0 0 0 Q96IR1;C9JEH7;A4FU11;Q53HV1;Q496E4;B2R491;P62701;P22090;Q53HI6;Q8TD47 Q96IR1 Q96IR1 RPS4X;RPS4Y1;RPS4Y2 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1;40S ribosomal protein S4, Y isoform 2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 405.8911 3 405.891278 1214.652 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.38 1 118.38 117.88 118.88 0 0 0 0 0.027033 1 71034 45.915 37.186 1 2072 421 1087 1204 3331 3331 GIPVVEHK 8 1 0 Unmodified _GIPVVEHK_ 0 0 0 0 P11388;J3KTB7;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 439.7586 2 439.758352 877.502152 91925.38 0.12194 5.3624E-05 0.040499 1.781E-05 0.16244 7.1433E-05 439.758265060632 443.765366220676 77.092 0.92667 77.092 76.828 77.755 0 396 80 7 0 0 0 0.02075 2 39989 79.116 69.998 1 0.74636 0.92291 0 335970000 189550000 146420000 2073 962;1032 1088 1205 3332;3333 3332 GIPVVEHK 8 1 0 Unmodified _GIPVVEHK_ 0 0 0 0 P11388;J3KTB7;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 443.7655 2 439.758352 877.502152 91083.57 0.084698 3.7247E-05 0.19666 8.6482E-05 0.28136 0.00012373 439.758317794807 443.76545075205 27.317 0.54872 27.317 26.999 27.547 1.9073E-06 132 36 5 0 0 0 0.030621 1 13183 65.676 50.656 1 1.3163 1.0259 0 14202000 6441800 7760600 2074 962;1032 1088 1205 3334 3334 GISASSPLQTSLVR 14 0 1 Phospho (STY) _GISASS(ph)PLQTSLVR_ GIS(0.001)AS(0.198)S(0.8)PLQT(0.001)SLVR GIS(-30.46)AS(-6.05)S(6.05)PLQT(-29.48)S(-36.31)LVR 0 0 1 0 Q9NUK2;A0A024R9R7;Q9ULG1 Q9NUK2 Q9NUK2 INOC1;INO80 DNA helicase INO80 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 753.3844 2 748.379438 1494.74432 71503.89 1.5884 0.0011887 0.1686 0.00012618 1.757 0.0013149 748.880780591631 753.383904846069 101.01 0.91972 101.01 100.42 101.34 0 209 69 4 0 0 0 3.7192E-08 2 57710 96.464 69.161 5 0.64185 0.79607 0 35227000 18949000 16278000 2075 173 1089 1206 3335;3336 3336 271 GISATLHVTSNPVHAADSPAK 21 1 0 Phospho (STY) _GISATLHVTSNPVHAADS(ph)PAK_ GISATLHVTSNPVHAADS(1)PAK GIS(-72.55)AT(-72.39)LHVT(-65.53)S(-65.53)NPVHAADS(65.53)PAK 0 0 1 0 A0A024R3K9;A0A024R3N2;Q6P4R8 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 718.6862 3 718.351075 2152.0314 72148.27 1.1558 0.00083031 -0.1528 -0.00010976 1.003 0.00072054 718.350983136121 721.356670581388 97.23 0.6532 97.23 96.773 97.426 0 186 54 6 0 0 0 9.0535E-19 1 55045 83.317 83.317 5 0.71758 0.90157 0 28422000 14532000 13890000 2076 76 1090 1207 3337 3337 98 GISATLHVTSNPVHAADSPAK 21 1 0 Phospho (STY) _GISATLHVTSNPVHAADS(ph)PAK_ GISATLHVTSNPVHAADS(1)PAK GIS(-41.64)AT(-47.5)LHVT(-41.86)S(-41.86)NPVHAADS(41.64)PAK 0 0 1 0 A0A024R3K9;A0A024R3N2;Q6P4R8 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 721.0234 3 718.351075 2152.0314 73163.9 1.0406 0.00074748 0.15516 0.00011146 1.1957 0.00085894 718.350819990764 721.356987873114 97.506 0.53668 97.506 97.332 97.869 -7.6294E-06 159 44 7 0 0 0 1.5823E-12 1 55246 64.845 64.845 5 0.60562 0.75613 0 26139000 16147000 9991800 2077 76 1090 1207 3338 3338 98 GISATLHVTSNPVHAADSPAK 21 1 0 Phospho (STY) _GISATLHVTSNPVHAADS(ph)PAK_ GISATLHVT(0.001)S(0.001)NPVHAADS(0.999)PAK GIS(-75.05)AT(-65.57)LHVT(-32.49)S(-32.49)NPVHAADS(32.49)PAK 0 0 1 0 A0A024R3K9;A0A024R3N2;Q6P4R8 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 721.361 3 718.351075 2152.0314 71762.43 1.1455 0.00082284 0.16932 0.00012163 1.3148 0.00094447 718.351209246644 721.357293985751 79.547 2.0024 79.547 78.836 80.839 0 781 189 8 0 0 0 3.3048E-24 1 50613 93.596 85.308 5 2.0629 1.3392 0 35979000 12098000 23881000 2078 76 1090 1207 3339 3339 98 GISPIVFDR 9 0 1 Phospho (STY) _GIS(ph)PIVFDR_ GIS(1)PIVFDR GIS(97.81)PIVFDR 0 0 1 0 J3QR07;Q96MU7 J3QR07 J3QR07 YTHDC1 YTH domain-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 542.2657 2 542.265357 1082.51616 81969.13 0.53788 0.00029167 -0.10348 -5.6114E-05 0.43439 0.00023556 542.265261560543 547.269355191489 110.5 1.2724 110.5 109.83 111.1 0 596 109 7 0 0 0 4.8898E-05 4 65328 97.813 70.851 1 0.87915 1.1113 0 188800000 97196000 91602000 2079 897 1091 1208 3340;3341;3342;3343 3342 1523 GISPIVFDR 9 0 1 Phospho (STY) _GIS(ph)PIVFDR_ GIS(1)PIVFDR GIS(84.66)PIVFDR 0 0 1 0 J3QR07;Q96MU7 J3QR07 J3QR07 YTHDC1 YTH domain-containing protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 542.2656 2 542.265357 1082.51616 82066.66 1.0159 0.00055091 -0.18297 -9.922E-05 0.83297 0.00045169 542.265203843786 547.26928716141 116.12 1.3846 116.12 115.49 116.87 0 723 124 8 0 0 0 0.00027536 4 74990 84.658 55.702 1 0.63387 0.42729 0 86715000 52291000 34425000 2080 897 1091 1208 3344;3345;3346;3347 3346 1523 GITINAAHVEYSTAAR 16 0 1 Unmodified _GITINAAHVEYSTAAR_ 0 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 561.9619 3 558.625037 1672.85328 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.233 1 96.233 95.733 96.733 7.6294E-06 0 0 0 0.0012482 1 54200 53.328 35.528 1 2081 998 1092 1209 3348 3348 GKGSLGSQGAKDEPEEELQK 20 3 0 2 Phospho (STY) _GKGS(ph)LGS(ph)QGAKDEPEEELQK_ GKGS(1)LGS(1)QGAKDEPEEELQK GKGS(63.7)LGS(63.7)QGAKDEPEEELQK 0 0 2 2 J3KQ96;E7ETY2;Q13428;B4DRA2;Q9UFD4 J3KQ96 J3KQ96 TCOF1;DKFZp434G1035 Treacle protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 749.9925 3 749.657444 2245.9505 70051.34 0.81773 0.00061302 0.10754 8.062E-05 0.92527 0.00069364 749.991666962555 757.67184336635 63.105 0.696 63.105 62.816 63.512 0 378 60 9 0 0 0 1.154E-08 1 29514 63.701 63.701 1 0.30026 0.38029 0 96456000 71460000 24996000 2082 792 1093 1210 3349 3349 1345;1346 GKKEELLK 8 3 0 Unmodified _GKKEELLK_ 0 0 0 2 A4D2M5 A4D2M5 A4D2M5 LOC154880 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 315.5309 3 315.530687 943.570232 106675.7 -0.34418 -0.0001086 0.46415 0.00014645 0.11997 3.7855E-05 315.53074543295 323.544953323438 109.55 2.0753 109.55 108.43 110.5 0 643 167 5 0 0 0 0.014444 1 64387 40.021 2.2938 1 0.51461 0.65178 0 95244000 60548000 34695000 2083 418 1094 1211 3350 3350 GKKEELLK 8 3 0 Unmodified _GKKEELLK_ 0 0 0 2 A4D2M5 A4D2M5 A4D2M5 LOC154880 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 484.8137 2 472.792392 943.570232 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.58 1 109.58 109.08 110.08 7.6294E-06 0 0 0 0.021295 1 64484 51.193 19.889 1 2084 418 1094 1211 3351 3351 GKKEELLK 8 3 0 Unmodified _GKKEELLK_ 0 0 0 2 A4D2M5 A4D2M5 A4D2M5 LOC154880 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 484.8134 2 472.792392 943.570232 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.13 1 113.13 112.63 113.63 0 0 0 0 0.033611 1 67178 43.246 6.2257 1 2085 418 1094 1211 3352 3352 GKLEAIITPPPAK 13 2 0 Phospho (STY) _GKLEAIIT(ph)PPPAK_ GKLEAIIT(1)PPPAK GKLEAIIT(166.9)PPPAK 0 0 1 1 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 707.8911 2 707.88891 1413.76327 71736.48 1.1437 0.00080958 -0.039907 -2.825E-05 1.1038 0.00078133 707.888901194847 715.903080097221 95.593 3.2528 95.593 94.185 97.437 0 1921 274 10 0 0 0 6.2173E-53 9 54636 166.9 162.46 1 1.0907 1.5137 0 1741600000 833290000 908280000 2086 935 1095 1212 3353;3354;3355;3356;3357;3358;3359;3360;3361 3361 2854 GKLEAIITPPPAK 13 2 0 Phospho (STY) _GKLEAIIT(ph)PPPAK_ GKLEAIIT(1)PPPAK GKLEAIIT(46.34)PPPAK 0 0 1 1 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 472.2613 3 472.261699 1413.76327 86600.81 0.57031 0.00026933 -0.068262 -3.2238E-05 0.50204 0.0002371 472.261611905938 477.604401318927 95.565 3.0044 95.565 94.206 97.211 0 854 251 8 0 0 0 0.0025549 1 52970 46.337 39.135 1 1.1092 1.5111 0 900420000 443510000 456910000 2087 935 1095 1212 3362 3362 2854 GKLEAIITPPPAK 13 2 0 Phospho (STY) _GKLEAIIT(ph)PPPAK_ GKLEAIIT(1)PPPAK GKLEAIIT(108.63)PPPAK 0 0 1 1 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 715.9042 2 707.88891 1413.76327 NaN NaN NaN 0.53248 0.00037693 NaN NaN NaN NaN 97.45 0.53847 97.45 97.319 97.857 7.6294E-06 0 0 0 1.744E-15 1 55130 108.63 79.091 1 NaN NaN 0 14374000 0 14374000 2088 935 1095 1212 3363 3363 2854 GKLEAIITPPPAK 13 2 0 Phospho (STY) _GKLEAIIT(ph)PPPAK_ GKLEAIIT(1)PPPAK GKLEAIIT(49.08)PPPAK 0 0 1 1 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 707.8879 2 707.88891 1413.76327 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.063 1 98.063 97.563 98.563 0 0 0 0 0.0031734 1 55628 49.081 29.838 1 2089 935 1095 1212 3364 3364 2854 GKLEAIITPPPAK 13 2 0 Phospho (STY) _GKLEAIIT(ph)PPPAK_ GKLEAIIT(1)PPPAK GKLEAIIT(120.7)PPPAK 0 0 1 1 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 708.3907 2 707.88891 1413.76327 71407.42 0.97595 0.00069087 -0.026064 -1.845E-05 0.94989 0.00067242 707.889297048082 715.903018848268 86.102 5.6805 86.102 84.221 89.902 0 3696 536 10 0 0 0 5.6703E-16 12 54437 120.7 101.52 1 1.2122 0.87254 0 1774600000 789010000 985570000 2090 935 1095 1212 3365;3366;3367;3368;3369;3370;3371;3372;3373;3374;3375;3376 3365 2854 GKLEAIITPPPAK 13 2 0 Phospho (STY) _GKLEAIIT(ph)PPPAK_ GKLEAIIT(1)PPPAK GKLEAIIT(41.86)PPPAK 0 0 1 1 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 472.2621 3 472.261699 1413.76327 85859.77 0.56296 0.00026586 -0.33153 -0.00015657 0.23143 0.00010929 472.261737333604 477.604237577933 86.301 4.1041 86.301 84.588 88.692 0 2536 386 10 0 0 0 0.0038353 2 54829 41.86 38.539 1 1.1967 0.87348 0 625850000 288980000 336870000 2091 935 1095 1212 3377;3378 3377 2854 GKLEAIITPPPAK 13 2 0 Phospho (STY) _GKLEAIIT(ph)PPPAK_ GKLEAIIT(1)PPPAK GKLEAIIT(139.6)PPPAK 0 0 1 1 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 707.8899 2 707.88891 1413.76327 72289.09 1.1392 0.00080644 0.31662 0.00022413 1.4558 0.0010306 707.889270885004 715.903285910202 145.38 0.2569 145.38 145.32 145.58 0 28 12 6 0 0 0 2.2246E-25 1 89162 139.6 124.46 1 1.1553 0.9138 0 10911000 5024400 5886600 2092 935 1095 1212 3379 3379 2854 GKLEAIITPPPAK 13 2 0 Phospho (STY) _GKLEAIIT(ph)PPPAK_ GKLEAIIT(1)PPPAK GKLEAIIT(56.87)PPPAK 0 0 1 1 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 707.8897 2 707.88891 1413.76327 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.508 1 89.508 89.008 90.008 0 0 0 0 0.00057234 1 57635 56.872 40.931 1 2093 935 1095 1212 3380 3380 2854 GKLEAIITPPPAKK 14 3 0 Phospho (STY) _GKLEAIIT(ph)PPPAKK_ GKLEAIIT(1)PPPAKK GKLEAIIT(111.66)PPPAKK 0 0 1 2 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 514.9601 3 514.96002 1541.85823 82830.19 0.74058 0.00038137 -0.20581 -0.00010598 0.53477 0.00027539 514.960067597845 522.974077055343 71.157 4.4903 71.157 69.25 73.74 7.6294E-06 2913 403 10 0 0 0 4.7492E-18 5 45893 111.66 111.66 1 1.2411 1.0609 0 425660000 185670000 239990000 2094 935 1096 1213 3381;3382;3383;3384;3385 3383 2854 GKLSAEENPDDSEVPSSSGINSTK 24 2 0 Phospho (STY) _GKLS(ph)AEENPDDSEVPSSSGINSTK_ GKLS(0.99)AEENPDDS(0.01)EVPSSSGINSTK GKLS(20.02)AEENPDDS(-20.02)EVPS(-37.76)S(-39.32)S(-40.49)GINS(-41.86)T(-42.17)K 0 0 1 1 Q9Y5Q9 Q9Y5Q9 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 848.7165 3 843.37271 2527.0963 66740.38 0.59975 0.00050581 -0.13523 -0.00011405 0.46451 0.00039176 843.706800841663 848.715530082597 69.665 0.76067 69.665 69.223 69.984 0 349 74 6 0 0 0 4.881E-06 2 34820 42.341 41.139 7 0.76113 0.95684 0 51757000 24017000 27740000 2095 1256 1097 1214 3386;3387 3387 2588 GKVEQLSPEEEEK 13 2 0 Phospho (STY) _GKVEQLS(ph)PEEEEK_ GKVEQLS(1)PEEEEK GKVEQLS(161.94)PEEEEK 0 0 1 1 G3V5J9;Q6FG41;P01100 G3V5J9 G3V5J9 FOS Proto-oncogene c-Fos MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 791.3555 2 791.355825 1580.6971 69819.13 1.0487 0.00082988 -0.23667 -0.00018729 0.812 0.00064258 791.355891189338 799.369535614996 30.736 0.7956 30.736 30.436 31.231 1.9073E-06 276 51 8 0 0 0 1.4174E-42 1 16089 161.94 161.94 1 0.89971 0.68583 0 49374000 25870000 23504000 2096 842 1098 1215 3388 3388 1446 GLASPTAITPVASAICGK 18 1 0 Phospho (STY) _GLAS(ph)PTAITPVASAICGK_ GLAS(0.996)PT(0.004)AITPVASAICGK GLAS(24.02)PT(-24.02)AIT(-56.11)PVAS(-77.18)AICGK 0 0 1 0 Q659E9;B4E3H1;B4E3N7 Q659E9 Q659E9 DKFZp586H1823 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 901.4551 2 897.446995 1792.87944 NaN NaN NaN 0.049881 4.4766E-05 NaN NaN NaN NaN 118.96 0.4128 118.96 118.8 119.21 -7.6294E-06 0 0 0 5.44E-16 1 71417 100.41 81.199 4 NaN NaN 0 6253400 0 6253400 2097 686 1099 1216 3389 3389 1130 GLASPTAITPVASAICGK 18 1 0 Phospho (STY) _GLAS(ph)PTAITPVASAICGK_ GLAS(0.859)PT(0.141)AITPVASAICGK GLAS(7.85)PT(-7.85)AIT(-41.61)PVAS(-48.2)AICGK 0 0 1 0 Q659E9;B4E3H1;B4E3N7 Q659E9 Q659E9 DKFZp586H1823 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 897.4484 2 897.446995 1792.87944 NaN NaN NaN NaN NaN NaN NaN NaN NaN 119.14 1 119.14 118.64 119.64 0 0 0 0 0.0012906 1 71586 51.147 33.641 4 2098 686 1099 1216 3390 3390 1130 GLDIPEVDLVIQSSPPK 17 1 0 Phospho (STY) _GLDIPEVDLVIQS(ph)SPPK_ GLDIPEVDLVIQS(0.629)S(0.371)PPK GLDIPEVDLVIQS(2.29)S(-2.29)PPK 0 0 1 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 948.4911 2 943.979182 1885.94381 61918.37 0.61859 0.00058394 0.020878 1.9708E-05 0.63947 0.00060365 944.480682485293 947.98624356348 133.22 0.43932 133.22 132.99 133.43 0 244 32 10 0 0 0 4.601E-12 2 80954 95.067 85.221 2 1.315 1.6293 0 135490000 57211000 78274000 2099 1214 1100 1217 3391;3392 3391 2439 GLDIPEVDLVIQSSPPK 17 1 0 Phospho (STY) _GLDIPEVDLVIQS(ph)SPPK_ GLDIPEVDLVIQS(0.611)S(0.389)PPK GLDIPEVDLVIQS(1.95)S(-1.95)PPK 0 0 1 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 948.4893 2 943.979182 1885.94381 61335.91 0.85236 0.00080461 0.043281 4.0856E-05 0.89564 0.00084547 944.481019926313 947.986503500764 134.79 0.17838 134.79 134.68 134.86 0 23 4 8 0 0 0 1.8836E-09 2 87087 85.493 85.493 2 1.3952 1.0486 0 18651000 8091300 10560000 2100 1214 1100 1217 3393;3394 3393 2439 GLDVDSLVIEHIQVNK 16 1 0 Unmodified _GLDVDSLVIEHIQVNK_ 0 0 0 0 A0A087WXM6;J3QQT2;J3QLC8;J3KRX5;A0A024R261;A0A0A0MRF8;A0A0A6YYL6;P18621;A4D1R6;J3KRB3;A0A087WWH0;J3QS96;A4D1R5 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32;LOC402695;LOC202789 60S ribosomal protein L17 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 593.9938 3 593.659748 1777.95741 79177.18 0.4563 0.00027089 -0.13598 -8.0723E-05 0.32033 0.00019016 593.659632432021 596.330919741498 132.48 0.68373 132.48 132.1 132.79 0 188 56 6 0 0 0 0.001034 2 80514 36.193 36.193 1 0.63642 0.75475 0 8156400 4600600 3555700 2101 60 1101 1218 3395;3396 3395 GLDVDSLVIEHIQVNK 16 1 0 Unmodified _GLDVDSLVIEHIQVNK_ 0 0 0 0 A0A087WXM6;J3QQT2;J3QLC8;J3KRX5;A0A024R261;A0A0A0MRF8;A0A0A6YYL6;P18621;A4D1R6;J3KRB3;A0A087WWH0;J3QS96;A4D1R5 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32;LOC402695;LOC202789 60S ribosomal protein L17 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 889.9869 2 889.985983 1777.95741 65359.99 0.5942 0.00052883 0.092462 8.229E-05 0.68666 0.00061112 889.986031998417 893.993143648424 133.2 0.50899 133.2 132.79 133.29 0 221 41 10 0 0 0 1.8452E-85 2 80987 218.06 218.06 1 0.7295 0.90646 0 92804000 55092000 37712000 2102 60 1101 1218 3397;3398 3398 GLDVDSLVIEHIQVNK 16 1 0 Unmodified _GLDVDSLVIEHIQVNK_ 0 0 0 0 A0A087WXM6;J3QQT2;J3QLC8;J3KRX5;A0A024R261;A0A0A0MRF8;A0A0A6YYL6;P18621;A4D1R6;J3KRB3;A0A087WWH0;J3QS96;A4D1R5 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32;LOC402695;LOC202789 60S ribosomal protein L17 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 596.3318 3 593.659748 1777.95741 78804.95 0.41971 0.00024916 -0.0048044 -2.8522E-06 0.4149 0.00024631 593.65982409398 596.331198009995 133.21 0.70712 133.21 132.66 133.37 0 268 55 10 0 0 0 4.4099E-23 3 81004 118.33 118.33 1 0.71014 0.87941 0 172170000 103830000 68335000 2103 60 1101 1218 3399;3400;3401 3400 GLDVDSLVIEHIQVNK 16 1 0 Unmodified _GLDVDSLVIEHIQVNK_ 0 0 0 0 A0A087WXM6;J3QQT2;J3QLC8;J3KRX5;A0A024R261;A0A0A0MRF8;A0A0A6YYL6;P18621;A4D1R6;J3KRB3;A0A087WWH0;J3QS96;A4D1R5 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32;LOC402695;LOC202789 60S ribosomal protein L17 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 593.6594 3 593.659748 1777.95741 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.58 1 131.58 131.08 132.08 0 0 0 0 0.017283 1 80040 29.733 17.817 1 2104 60 1101 1218 3402 3402 GLDVDSLVIEHIQVNK 16 1 0 Unmodified _GLDVDSLVIEHIQVNK_ 0 0 0 0 A0A087WXM6;J3QQT2;J3QLC8;J3KRX5;A0A024R261;A0A0A0MRF8;A0A0A6YYL6;P18621;A4D1R6;J3KRB3;A0A087WWH0;J3QS96;A4D1R5 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32;LOC402695;LOC202789 60S ribosomal protein L17 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 893.9944 2 889.985983 1777.95741 NaN NaN NaN NaN NaN NaN NaN NaN NaN 132.26 1 132.26 131.76 132.76 -1.5259E-05 0 0 0 1.3842E-07 1 80465 72.652 55.627 1 2105 60 1101 1218 3403 3403 GLDVDSLVIEHIQVNK 16 1 0 Unmodified _GLDVDSLVIEHIQVNK_ 0 0 0 0 A0A087WXM6;J3QQT2;J3QLC8;J3KRX5;A0A024R261;A0A0A0MRF8;A0A0A6YYL6;P18621;A4D1R6;J3KRB3;A0A087WWH0;J3QS96;A4D1R5 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32;LOC402695;LOC202789 60S ribosomal protein L17 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 889.9861 2 889.985983 1777.95741 NaN NaN NaN NaN NaN NaN NaN NaN NaN 132.35 1 132.35 131.85 132.85 0 0 0 0 4.0757E-06 1 80523 68.069 56.963 1 2106 60 1101 1218 3404 3404 GLDVDSLVIEHIQVNK 16 1 0 Unmodified _GLDVDSLVIEHIQVNK_ 0 0 0 0 A0A087WXM6;J3QQT2;J3QLC8;J3KRX5;A0A024R261;A0A0A0MRF8;A0A0A6YYL6;P18621;A4D1R6;J3KRB3;A0A087WWH0;J3QS96;A4D1R5 A0A087WXM6 A0A087WXM6 RPL17;hCG_24487;RPL17-C18orf32;LOC402695;LOC202789 60S ribosomal protein L17 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 593.9944 3 593.659748 1777.95741 79457.97 1.09 0.00064707 -0.49756 -0.00029538 0.59241 0.00035169 593.99375358735 596.330795531816 121.31 0.53955 121.31 121.05 121.59 7.6294E-06 272 51 8 0 0 0 0.00023625 1 78349 43.791 43.791 1 0.87438 0.61003 0 23282000 12346000 10936000 2107 60 1101 1218 3405 3405 GLEGERENYSR 11 0 2 Phospho (STY) _GLEGERENYS(ph)R_ GLEGERENYS(1)R GLEGERENY(-35.52)S(35.52)R 0 0 1 1 B7ZLC8;Q15652 B7ZLC8 B7ZLC8 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 695.2969 2 695.293363 1388.57217 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.955 1 90.955 90.455 91.455 0 0 0 0 0.0010485 1 50144 66.595 43.855 2 2108 722 1102 1219 3406 3406 1192 GLEGERPAR 9 0 2 Unmodified _GLEGERPAR_ 0 0 0 1 Q59GE4;P46783;Q14489;F6U211;S4R435 Q59GE4 Q59GE4 RPS10;RPS10-NUDT3 40S ribosomal protein S10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 492.7646 2 492.764697 983.514842 84010.39 0.35694 0.00017589 -0.18481 -9.1068E-05 0.17213 8.4819E-05 492.764592060156 502.77278924926 62.03 0.32673 62.03 61.913 62.24 -3.8147E-06 86 20 6 0 0 0 0.01089 1 28829 67.169 39.915 1 1.196 1.4895 0 112310000 49613000 62692000 2109 996 1103 1220 3407 3407 GLGAGAGAGEESPATSLPR 19 0 1 Phospho (STY) _GLGAGAGAGEES(ph)PATSLPR_ GLGAGAGAGEES(0.963)PAT(0.031)S(0.006)LPR GLGAGAGAGEES(14.96)PAT(-14.96)S(-21.96)LPR 0 0 1 0 O15173 O15173 O15173 PGRMC2 Membrane-associated progesterone receptor component 2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 889.9127 2 889.409455 1776.80436 NaN NaN NaN -0.46733 -0.00041565 NaN NaN NaN NaN 79.882 0.81602 79.882 79.361 80.177 0 0 0 0 1.5478E-05 1 41931 53.779 40.799 3 NaN NaN 0 13674000 13674000 0 2110 923 1104 1221 3408 3408 1552 GLGHPPSSPLLK 12 1 0 Phospho (STY) _GLGHPPS(ph)SPLLK_ GLGHPPS(0.5)S(0.5)PLLK GLGHPPS(0)S(0)PLLK 0 0 1 0 B9EGQ5;M0QXA7;O95785 B9EGQ5 B9EGQ5 WIZ Protein Wiz MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 641.832 2 641.831395 1281.64824 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.262 1 87.262 86.762 87.762 0 0 0 0 0.005146 1 47412 45.433 21.09 2 2111 731 1105 1222 3409 3409 1207;1208 GLGPPSPPAPPR 12 0 1 Phospho (STY) _GLGPPS(ph)PPAPPR_ GLGPPS(1)PPAPPR GLGPPS(93.01)PPAPPR 0 0 1 0 A0A140TA73;A0A024R732;Q13425 A0A140TA73 A0A140TA73 SNTB2 Beta-2-syntrophin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 616.8069 2 611.802638 1221.59072 79769.06 0.63173 0.0003865 0.25859 0.0001582 0.89032 0.0005447 611.802624741235 616.806806439003 81.595 1.0325 81.595 80.926 81.959 0 208 93 5 0 0 0 8.2397E-06 1 43284 93.011 72.386 1 1.7963 2.2075 0 30631000 11700000 18931000 2112 127 1106 1223 3410 3410 190 GLGPPSPPAPPR 12 0 1 Phospho (STY) _GLGPPS(ph)PPAPPR_ GLGPPS(1)PPAPPR GLGPPS(71.24)PPAPPR 0 0 1 0 A0A140TA73;A0A024R732;Q13425 A0A140TA73 A0A140TA73 SNTB2 Beta-2-syntrophin ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 616.8077 2 611.802638 1221.59072 NaN NaN NaN 0.20124 0.00012312 NaN NaN NaN NaN 83.584 0.64793 83.584 83.348 83.996 0 0 0 0 0.0020743 1 53653 71.241 47.39 1 NaN NaN 0 6048400 0 6048400 2113 127 1106 1223 3411 3411 190 GLHQSIEEFR 10 0 1 Unmodified _GLHQSIEEFR_ 0 0 0 0 Q15149;E9PMV1 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 409.2117 3 405.875405 1214.60439 96411.2 0.52564 0.00021334 0.13696 5.5589E-05 0.6626 0.00026893 405.875454829635 409.211487040021 101.17 0.42345 101.17 100.99 101.41 7.6294E-06 101 34 5 0 0 0 0.0031 2 58140 52.79 42.266 1 1.4845 1.7894 0 18697000 6879000 11818000 2114 1070 1107 1224 3412;3413 3412 GLLSNHTGSPR 11 0 1 Phospho (STY) _GLLSNHTGS(ph)PR_ GLLSNHT(0.018)GS(0.982)PR GLLS(-74.73)NHT(-17.33)GS(17.33)PR 0 0 1 0 D6W625;Q13111 D6W625 D6W625 CHAF1A Chromatin assembly factor 1 subunit A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 609.7844 2 609.784976 1217.5554 78057.24 0.53296 0.00032499 -0.57446 -0.0003503 -0.041504 -2.5309E-05 609.784244839304 614.788923105365 64.88 0.32672 64.88 64.671 64.998 0 82 23 5 0 0 0 2.6994E-14 2 31036 135.94 118.84 3 0.47057 0.57883 0 25267000 15919000 9348500 2115 779 1108 1225 3414;3415 3415 1321 GLLSNHTGSPR 11 0 1 Phospho (STY) _GLLSNHTGS(ph)PR_ GLLSNHT(0.111)GS(0.889)PR GLLS(-36.16)NHT(-9.03)GS(9.03)PR 0 0 1 0 D6W625;Q13111 D6W625 D6W625 CHAF1A Chromatin assembly factor 1 subunit A MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 614.7898 2 609.784976 1217.5554 NaN NaN NaN NaN NaN NaN NaN NaN NaN 30.511 1 30.511 30.011 31.011 0 0 0 0 0.00020357 1 15968 75.736 50.599 3 2116 779 1108 1225 3416 3416 1321 GLLYDSDEEDEERPAR 16 0 2 Phospho (STY) _GLLYDS(ph)DEEDEERPAR_ GLLY(0.168)DS(0.832)DEEDEERPAR GLLY(-6.95)DS(6.95)DEEDEERPAR 0 0 1 1 B3KXZ4;B7Z8Z6;P49736 B3KXZ4 B3KXZ4 MCM2 DNA helicase;DNA replication licensing factor MCM2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 997.9212 2 987.409849 1972.80514 NaN NaN NaN 0.34272 0.0003384 NaN NaN NaN NaN 80.256 0.60513 80.256 79.849 80.454 0 0 0 0 0.0040745 1 42405 45.829 34.296 2 NaN NaN 0 12026000 0 12026000 2117 612 1109 1226 3417 3417 1010 GLPEAEDSPCR 11 0 1 Phospho (STY) _GLPEAEDS(ph)PCR_ GLPEAEDS(1)PCR GLPEAEDS(56.95)PCR 0 0 1 0 Q7Z5J4 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 660.7617 2 655.757767 1309.50098 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.153 1 49.153 48.653 49.653 0 0 0 0 0.0025957 1 19520 56.951 45.104 1 2118 1137 1110 1227 3418 3418 2179 GLPEAEDSPCRAPVLPK 17 1 1 Phospho (STY) _GLPEAEDS(ph)PCRAPVLPK_ GLPEAEDS(1)PCRAPVLPK GLPEAEDS(42.31)PCRAPVLPK 0 0 1 1 Q7Z5J4 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 639.6392 3 639.304298 1914.89106 75563.64 1.0579 0.00067631 -0.28291 -0.00018087 0.77497 0.00049544 639.304175613723 645.311634308705 86.278 1.4458 86.278 85.547 86.993 7.6294E-06 728 134 8 0 0 0 0.0002555 1 55326 42.309 31.039 1 2.0033 1.5443 0 44654000 15155000 29498000 2119 1137 1111 1228 3419 3419 2179 GLPFYAGLSPAGK 13 1 0 Phospho (STY) _GLPFYAGLS(ph)PAGK_ GLPFYAGLS(1)PAGK GLPFY(-54.16)AGLS(54.16)PAGK 0 0 1 0 B9EGR5;Q8IWI9 B9EGR5 B9EGR5 MGA MAX gene-associated protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 679.3315 2 679.331228 1356.6479 72935.99 0.78489 0.0005332 -0.011138 -7.5665E-06 0.77375 0.00052563 679.331194861762 683.338179391373 117.58 0.84898 117.58 117.22 118.07 -7.6294E-06 406 76 7 0 0 0 0.00011849 1 70380 85.45 68.083 2 0.66205 0.82896 0 61481000 37625000 23856000 2120 732 1112 1229 3420 3420 1219 GLPFYAGLSPAGK 13 1 0 Phospho (STY) _GLPFYAGLS(ph)PAGK_ GLPFYAGLS(1)PAGK GLPFY(-39.82)AGLS(39.82)PAGK 0 0 1 0 B9EGR5;Q8IWI9 B9EGR5 B9EGR5 MGA MAX gene-associated protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 683.3388 2 679.331228 1356.6479 74296.59 1.0141 0.00068892 0.13446 9.1346E-05 1.1486 0.00078026 679.331217619973 683.338331368578 124.6 1.0364 124.6 124.09 125.13 7.6294E-06 567 97 8 0 0 0 0.0038134 2 80751 64.675 53.185 2 1.8286 1.1868 0 35677000 11737000 23940000 2121 732 1112 1229 3421;3422 3422 1219 GLSEDTTEETLK 12 1 0 Unmodified _GLSEDTTEETLK_ 0 0 0 0 B3KM80;Q6ZS99;A0A024R4A0;P19338;H7BY16;Q9BQ02;B3KTP9 B3KM80 B3KM80 NCL Nucleolin MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 661.8198 2 661.819729 1321.62491 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.078 1 66.078 65.578 66.578 0 0 0 0 2.9442E-05 1 32041 73.887 38.618 1 2122 87 1113 1230 3423 3423 GLSPDQVLK 9 1 0 Phospho (STY) _GLS(ph)PDQVLK_ GLS(1)PDQVLK GLS(49.35)PDQVLK 0 0 1 0 REV__G3V4R0 REV__G3V4R0 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 522.7647 2 518.757365 1035.50018 84831.13 0.9358 0.00048545 -0.23895 -0.00012396 0.69685 0.00036149 518.757195820313 522.764254367864 90.536 0.92723 90.536 90.142 91.07 7.6294E-06 355 88 6 0 0 0 0.016459 1 58248 49.35 31.965 1 1.5762 1.0608 0 26626000 10005000 16622000 + 2123 1271 1114 1231 3424 3424 2607 GLSSAGGGSPHREDAQPEHSASAR 24 0 2 Phospho (STY) _GLSSAGGGS(ph)PHREDAQPEHSASAR_ GLSS(0.002)AGGGS(0.989)PHREDAQPEHS(0.004)AS(0.005)AR GLS(-35.56)S(-26.25)AGGGS(23.37)PHREDAQPEHS(-24.43)AS(-23.37)AR 0 0 1 1 A0A024R6P8;Q92994;Q6ZV39;B3KWA2 A0A024R6P8 A0A024R6P8 BRF1 Transcription factor IIIB 90 kDa subunit MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 611.2717 4 611.020199 2440.05169 77216.95 0.59673 0.00036462 0.59442 0.0003632 1.1912 0.00072782 611.271709177705 616.276084615116 64.198 0.20448 64.198 64.077 64.281 0 58 12 6 0 0 0 3.71E-15 1 30486 72.228 60.375 5 0.34351 0.42576 0 35149000 22126000 13022000 2124 125 1115 1232 3425 3425 188 GLSSAGGGSPHREDAQPEHSASAR 24 0 2 Phospho (STY) _GLSSAGGGS(ph)PHREDAQPEHSASAR_ GLSS(0.001)AGGGS(0.999)PHREDAQPEHSASAR GLS(-42.71)S(-32.09)AGGGS(32.09)PHREDAQPEHS(-65.68)AS(-64.74)AR 0 0 1 1 A0A024R6P8;Q92994;Q6ZV39;B3KWA2 A0A024R6P8 A0A024R6P8 BRF1 Transcription factor IIIB 90 kDa subunit MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 814.6931 3 814.35784 2440.05169 67211.35 0.90052 0.00073335 -0.029398 -2.3941E-05 0.87112 0.0007094 814.692096413268 821.03017493269 16.24 0.20908 16.24 16.122 16.332 0 50 6 10 0 0 0 2.9015E-37 2 3614 110.4 84.2 5 0.70889 0.61465 0 49022000 28361000 20660000 2125 125 1115 1232 3426;3427 3426 188 GLSSAGGGSPHREDAQPEHSASAR 24 0 2 Phospho (STY) _GLSSAGGGS(ph)PHREDAQPEHSASAR_ GLS(0.012)S(0.01)AGGGS(0.972)PHREDAQPEHS(0.002)AS(0.003)AR GLS(-18.91)S(-19.85)AGGGS(18.91)PHREDAQPEHS(-26.19)AS(-25.37)AR 0 0 1 1 A0A024R6P8;Q92994;Q6ZV39;B3KWA2 A0A024R6P8 A0A024R6P8 BRF1 Transcription factor IIIB 90 kDa subunit MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 611.2711 4 611.020199 2440.05169 76268.82 0.75368 0.00046051 -0.049117 -3.0012E-05 0.70456 0.0004305 611.270965714339 616.024281631056 16.238 0.29966 16.238 16.122 16.422 0 69 9 12 0 0 0 5.5172E-11 1 3631 61.738 43.178 5 0.7385 0.63925 0 34877000 19709000 15168000 2126 125 1115 1232 3428 3428 188 GLVAAYSGESDSEEEQER 18 0 1 2 Phospho (STY) _GLVAAYSGES(ph)DS(ph)EEEQER_ GLVAAY(0.097)S(0.549)GES(0.677)DS(0.677)EEEQER GLVAAY(-10.79)S(-1.76)GES(1.76)DS(1.76)EEEQER 0 0 2 0 A0A0S2Z4X1;A0A0S2Z4W4;Q7Z3D7;A0A0A0MR66;P98175 A0A0S2Z4X1 A0A0S2Z4X1 DKFZp686E2459;RBM10 RNA-binding protein 10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1063.3979 2 1058.39321 2114.77187 62486.37 0.4159 0.00044019 0.5174 0.00054761 0.9333 0.00098779 1058.39352394632 1063.3980316987 76.798 0.64502 76.798 76.452 77.097 0 166 55 4 0 0 0 0.00013987 1 39855 44.567 30.904 6 1.0299 1.267 0 24388000 9438700 14949000 2127 284 1116 1233 3429 3429 442;443 GLVRPHK 7 1 1 Unmodified _GLVRPHK_ 0 0 0 1 H7BZN7;Q53HB9;Q9NY93 H7BZN7 H7BZN7 DDX56 Probable ATP-dependent RNA helicase DDX56 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 403.7537 2 403.753404 805.492256 NaN NaN NaN 0.26648 0.00010759 NaN NaN NaN NaN 82.279 1.2621 82.279 81.633 82.895 0 0 0 0 0.011039 1 44114 78.994 48.55 1 NaN NaN 0 32570000 32570000 0 2128 880 1117 1234 3430 3430 GLWSTDSAEEDK 12 1 0 Phospho (STY) _GLWSTDS(ph)AEEDK_ GLWS(0.002)T(0.066)DS(0.932)AEEDK GLWS(-27.53)T(-11.5)DS(11.5)AEEDK 0 0 1 0 Q99549;A0A0A0MT47;B3KS10 Q99549 Q99549 MPHOSPH8 M-phase phosphoprotein 8 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 709.2806 2 709.279587 1416.54462 NaN NaN NaN -0.14175 -0.00010054 NaN NaN NaN NaN 75.028 0.58048 75.028 74.698 75.279 -7.6294E-06 0 0 0 7.5921E-06 1 38444 88.021 63.729 3 NaN NaN 0 8813900 8813900 0 2129 1191 1118 1235 3431 3431 2356 GLWSTDSAEEDK 12 1 0 Phospho (STY) _GLWSTDS(ph)AEEDK_ GLWS(0.014)T(0.193)DS(0.794)AEEDK GLWS(-17.63)T(-6.15)DS(6.15)AEEDK 0 0 1 0 Q99549;A0A0A0MT47;B3KS10 Q99549 Q99549 MPHOSPH8 M-phase phosphoprotein 8 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 713.2871 2 709.279587 1416.54462 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.856 1 74.856 74.356 75.356 0 0 0 0 0.0078096 1 38406 43.761 32.07 3 2130 1191 1118 1235 3432 3432 2356 GLWSTDSAEEDK 12 1 0 Phospho (STY) _GLWSTDS(ph)AEEDK_ GLWS(0.018)T(0.243)DS(0.739)AEEDK GLWS(-16.13)T(-4.83)DS(4.83)AEEDK 0 0 1 0 Q99549;A0A0A0MT47;B3KS10 Q99549 Q99549 MPHOSPH8 M-phase phosphoprotein 8 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 713.2871 2 709.279587 1416.54462 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.921 1 74.921 74.421 75.421 0 0 0 0 0.0026015 1 38452 50.897 41.116 3 2131 1191 1118 1235 3433 3433 2356 GLWSTDSAEEDK 12 1 0 Phospho (STY) _GLWSTDS(ph)AEEDK_ GLWS(0.035)T(0.099)DS(0.865)AEEDK GLWS(-13.91)T(-9.4)DS(9.4)AEEDK 0 0 1 0 Q99549;A0A0A0MT47;B3KS10 Q99549 Q99549 MPHOSPH8 M-phase phosphoprotein 8 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 713.2886 2 709.279587 1416.54462 76269.77 0.99177 0.00070344 -0.075768 -5.3741E-05 0.916 0.0006497 709.27948055888 713.28689728085 73.391 0.97507 73.391 72.836 73.811 0 221 85 4 0 0 0 0.0080797 1 46560 55.291 47.646 3 1.0675 0.85631 0 6461700 2908900 3552800 2132 1191 1118 1235 3434 3434 2356 GNDPLTSSPGR 11 0 1 Phospho (STY) _GNDPLTS(ph)SPGR_ GNDPLT(0.003)S(0.498)S(0.498)PGR GNDPLT(-21.83)S(0)S(0)PGR 0 0 1 0 B3KXZ4;B7Z8Z6;P49736;C9J013;C9JZ21;F8WDM3 B3KXZ4 B3KXZ4 MCM2 DNA helicase;DNA replication licensing factor MCM2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 590.754 2 590.753342 1179.49213 80228.48 0.74071 0.00043758 -0.38922 -0.00022993 0.3515 0.00020765 590.753421669426 595.75754092827 48.597 0.9132 48.597 48.099 49.012 -3.8147E-06 229 60 6 0 0 0 0.00059007 3 19133 84.169 73.938 3 1.1986 1.3151 0 7392900 2970700 4422200 2133 612 1119 1236 3435;3436;3437 3437 1011;1012;2784 GNLTPLTGR 9 0 1 Phospho (STY) _GNLT(ph)PLTGR_ GNLT(1)PLTGR GNLT(33.03)PLT(-33.03)GR 0 0 1 0 B3KNS8;O75683 B3KNS8 B3KNS8 SURF6 Surfeit locus protein 6 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 509.7519 2 504.747331 1007.48011 NaN NaN NaN 0.50975 0.0002573 NaN NaN NaN NaN 68.306 0.47495 68.306 67.913 68.388 0 0 0 0 0.024831 1 33691 51.841 30.095 2 NaN NaN 0 12073000 0 12073000 2134 588 1120 1237 3438 3438 2772 GNQSGRSPNNPFSR 14 0 2 Phospho (STY) _GNQSGRS(ph)PNNPFSR_ GNQS(0.203)GRS(0.797)PNNPFSR GNQS(-5.94)GRS(5.94)PNNPFS(-32.89)R 0 0 1 1 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 533.2339 3 533.233754 1596.67943 81864.7 0.61307 0.00032691 -0.27506 -0.00014667 0.33801 0.00018024 533.233510636854 539.905820827314 60.237 0.94482 60.237 59.902 60.847 -3.8147E-06 445 66 11 0 0 0 0.0010398 2 27209 56.121 45.84 3 0.65426 0.81906 0 390870000 237240000 153630000 2135 27 1121 1238 3439;3440 3440 33 GNQSGRSPNNPFSR 14 0 2 Phospho (STY) _GNQSGRS(ph)PNNPFSR_ GNQS(0.204)GRS(0.796)PNNPFSR GNQS(-5.9)GRS(5.9)PNNPFS(-39.59)R 0 0 1 1 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 799.3478 2 799.346992 1596.67943 67270.41 0.94182 0.00075284 0.2323 0.00018569 1.1741 0.00093853 799.346910122058 809.356308833603 60.289 0.97775 60.289 60.004 60.982 0 237 63 6 0 0 0 0.0026821 2 27226 43.897 35.665 3 0.87948 1.0952 0 109760000 63227000 46529000 2136 27 1121 1238 3441;3442 3442 33 GNSQLLLS 8 0 0 Phospho (STY) _GNSQLLLS(ph)_ GNSQLLLS(1) GNS(-60.25)QLLLS(60.25) 0 0 1 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase ISO-MSMS -1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 911.424 1 911.423389 910.416113 NaN NaN NaN -0.20682 -0.0001885 NaN NaN NaN NaN 99.884 2.9404 99.884 98.702 101.64 0 0 0 0 0.0041554 1 64842 71.342 37.09 2 2137 995 1122 1239 3443 3443 1799 GNTLKNIEKECNAK 14 3 0 Unmodified _GNTLKNIEKECNAK_ 0 0 0 2 A0A024R588;A0A024R566;A0A024R5D9;A0A024R572;Q15637;B4DX42;B4DSE4;B4DJU4 A0A024R588 A0A024R588 SF1 Splicing factor 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 821.9398 2 809.914504 1617.81445 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.46 1 118.46 117.96 118.96 7.6294E-06 0 0 0 0.032434 1 71086 35.511 2.9052 1 2138 103 1123 1240 3444 3444 GPAGEAGASPPVR 13 0 1 Phospho (STY) _GPAGEAGAS(ph)PPVR_ GPAGEAGAS(1)PPVR GPAGEAGAS(118.37)PPVR 0 0 1 0 A0A140TA73;A0A024R732;Q13425 A0A140TA73 A0A140TA73 SNTB2 Beta-2-syntrophin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 623.2856 2 623.284809 1244.55507 77134.38 0.86239 0.00053752 0.016331 1.0179E-05 0.87872 0.0005477 623.284773887879 628.28886231821 48.506 0.95481 48.506 47.946 48.901 0 228 64 5 0 0 0 6.4669E-15 3 19051 118.37 101.42 1 1.58 1.745 0 8161500 3210900 4950600 2139 127 1124 1241 3445;3446;3447 3447 191 GPAGEAGASPPVRR 14 0 2 Phospho (STY) _GPAGEAGAS(ph)PPVRR_ GPAGEAGAS(1)PPVRR GPAGEAGAS(54.28)PPVRR 0 0 1 1 A0A140TA73;A0A024R732;Q13425 A0A140TA73 A0A140TA73 SNTB2 Beta-2-syntrophin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 474.5651 3 467.892669 1400.65618 88169.63 0.28364 0.00013271 -0.15484 -7.2448E-05 0.1288 6.0265E-05 467.892542705063 474.564760826374 49.185 0.95412 49.185 48.737 49.691 0 360 74 6 0 0 0 0.00071841 1 19386 54.281 38.736 1 2.1634 2.6134 0 16765000 4766100 11999000 2140 127 1125 1242 3448 3448 191 GPEEEEIGSPEPMAAPASASQK 22 1 0 Oxidation (M),Phospho (STY) _GPEEEEIGS(ph)PEPM(ox)AAPASASQK_ GPEEEEIGSPEPM(1)AAPASASQK GPEEEEIGS(1)PEPMAAPASASQK GPEEEEIGSPEPM(120.31)AAPASASQK GPEEEEIGS(65.79)PEPMAAPAS(-65.79)AS(-73.12)QK 0 1 1 0 B7Z9T5;A0A024R632;Q14807;H3BRB3 B7Z9T5 B7Z9T5 KIF22 Kinesin-like protein;Kinesin-like protein KIF22 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1158.4967 2 1154.48797 2306.96139 57011.21 0.17963 0.00020738 0.27727 0.0003201 0.4569 0.00052749 1154.99028907424 1158.99681729087 61.861 1.2584 61.861 61.184 62.442 0 711 91 11 0 0 0 1.3491E-44 3 28935 120.31 120.31 3 0.92313 1.1434 0 155730000 81521000 74205000 2141 116 1126 1243 3449;3450;3451 3451 24 169 GPEEEEIGSPEPMAAPASASQKLSPLQK 28 2 0 Oxidation (M),2 Phospho (STY) _GPEEEEIGS(ph)PEPM(ox)AAPASASQKLS(ph)PLQK_ GPEEEEIGSPEPM(1)AAPASASQKLSPLQK GPEEEEIGS(0.999)PEPMAAPAS(0.31)AS(0.252)QKLS(0.439)PLQK GPEEEEIGSPEPM(51.71)AAPASASQKLSPLQK GPEEEEIGS(30.37)PEPMAAPAS(-1.51)AS(-2.42)QKLS(1.51)PLQK 0 1 2 1 B7Z9T5;A0A024R632;Q14807;H3BRB3 B7Z9T5 B7Z9T5 KIF22 Kinesin-like protein;Kinesin-like protein KIF22 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1019.1197 3 1018.78534 3053.33418 59878.27 0.20312 0.00020693 0.56783 0.0005785 0.77095 0.00078543 1019.1201704011 1024.46340331668 88.256 0.861 88.256 87.814 88.675 0 604 77 10 0 0 0 6.7254E-11 1 47937 51.715 51.715 6 0.9368 1.2152 0 157950000 81557000 76397000 2142 116 1127 1244 3452 3452 24 169;170 GPESESEDHRASGEVR 16 0 2 Phospho (STY) _GPESESEDHRAS(ph)GEVR_ GPESES(0.007)EDHRAS(0.993)GEVR GPES(-41.88)ES(-21.37)EDHRAS(21.37)GEVR 0 0 1 1 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 607.9182 3 607.918159 1820.73265 NaN NaN NaN 0.78534 0.00047742 NaN NaN NaN NaN 52.917 0.91463 52.917 52.338 53.253 0 0 0 0 8.7987E-11 1 21854 87.49 59.79 3 NaN NaN 0 3929000 3929000 0 2143 1027 1128 1245 3453 3453 1855 GPESESEDHRASGEVR 16 0 2 Phospho (STY) _GPESESEDHRAS(ph)GEVR_ GPES(0.002)ES(0.065)EDHRAS(0.933)GEVR GPES(-25.84)ES(-11.58)EDHRAS(11.58)GEVR 0 0 1 1 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 614.5909 3 607.918159 1820.73265 NaN NaN NaN NaN NaN NaN NaN NaN NaN 52.766 1 52.766 52.266 53.266 0 0 0 0 0.0013525 1 21901 42.068 32.011 3 2144 1027 1128 1245 3454 3454 1855 GPGEPDSPTPLHPPTPPILSTDR 23 0 1 Phospho (STY) _GPGEPDS(ph)PTPLHPPTPPILSTDR_ GPGEPDS(0.785)PT(0.213)PLHPPT(0.002)PPILSTDR GPGEPDS(5.66)PT(-5.66)PLHPPT(-26.56)PPILS(-35.24)T(-35.24)DR 0 0 1 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 823.3958 3 820.05985 2457.15772 67146.73 0.84542 0.0006933 0.018144 1.4879E-05 0.86357 0.00070818 820.394235927803 823.73039262422 114.01 0.96922 114.01 113.47 114.44 0 617 85 11 0 0 0 4.0071E-07 1 67542 48.759 43.494 5 1.026 1.2962 0 138350000 68492000 69854000 2145 1034 1129 1246 3455 3455 1880;2908 GPGEPDSPTPLHPPTPPILSTDR 23 0 1 2 Phospho (STY) _GPGEPDS(ph)PTPLHPPT(ph)PPILSTDR_ GPGEPDS(0.889)PT(0.147)PLHPPT(0.911)PPILS(0.027)T(0.025)DR GPGEPDS(8.8)PT(-8.8)PLHPPT(13.4)PPILS(-15.12)T(-15.51)DR 0 0 2 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 847.0505 3 846.715293 2537.12405 66329.95 0.84072 0.00071185 -0.076456 -6.4736E-05 0.76426 0.00064711 847.049546955102 850.385539303243 118.07 1.3354 118.07 117.42 118.75 0 1085 115 12 0 0 0 4.4953E-13 3 70983 63.427 63.427 10 0.76204 0.96496 0 511260000 290460000 220800000 2146 1034 1129 1247 3456;3457;3458 3457 1880;2908 GPGQPSSPQRLDR 13 0 2 Phospho (STY) _GPGQPS(ph)SPQRLDR_ GPGQPS(0.5)S(0.5)PQRLDR GPGQPS(0)S(0)PQRLDR 0 0 1 1 Q5QTR6;A0A024QZC1;O95400 Q5QTR6 Q5QTR6 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 498.9038 3 492.231461 1473.67256 85492.59 0.45284 0.0002229 -0.058444 -2.8768E-05 0.39439 0.00019413 492.23145321189 498.903586088597 46.626 0.91336 46.626 46.079 46.992 3.8147E-06 390 65 8 0 0 0 0.0021716 2 17873 49.482 43.64 2 0.68464 0.84494 0 30251000 17515000 12736000 2147 12 1130 1248 3459;3460 3460 13;14 GPGQPSSPQRLDR 13 0 2 Phospho (STY) _GPGQPS(ph)SPQRLDR_ GPGQPS(0.5)S(0.5)PQRLDR GPGQPS(0)S(0)PQRLDR 0 0 1 1 Q5QTR6;A0A024QZC1;O95400 Q5QTR6 Q5QTR6 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 737.8439 2 737.843554 1473.67256 71217.09 0.9727 0.0007177 0.23165 0.00017092 1.2044 0.00088863 737.843557018473 747.852575677534 46.568 0.9192 46.568 46.045 46.965 3.8147E-06 327 66 8 0 0 0 0.0045654 1 17656 48.112 34.927 2 0.60427 0.72714 0 15618000 9315800 6302500 2148 12 1130 1248 3461 3461 13;14 GPGQPSSPQRLDR 13 0 2 Phospho (STY) _GPGQPS(ph)SPQRLDR_ GPGQPS(0.5)S(0.5)PQRLDR GPGQPS(0)S(0)PQRLDR 0 0 1 1 Q5QTR6;A0A024QZC1;O95400 Q5QTR6 Q5QTR6 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 492.2318 3 492.231461 1473.67256 86175.89 0.020828 1.0252E-05 0.098587 4.8528E-05 0.11942 5.878E-05 492.231467757807 498.903801476445 22.091 0.53627 22.091 21.86 22.396 -1.9073E-06 176 27 9 0 0 0 0.0018763 1 8641 56.599 44.684 2 0.53279 0.46316 0 82833000 53256000 29577000 2149 12 1130 1248 3462 3462 13;14 GPGRPVSSPHELR 13 0 2 Phospho (STY) _GPGRPVS(ph)SPHELR_ GPGRPVS(0.584)S(0.416)PHELR GPGRPVS(1.47)S(-1.47)PHELR 0 0 1 1 B4E223;Q68D10 B4E223 B4E223 SPTY2D1 Protein SPT2 homolog MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 490.2403 3 490.240068 1467.69838 86170.26 -0.063778 -3.1266E-05 0.50924 0.00024965 0.44546 0.00021838 490.240252720263 496.912535966969 22.446 0.44252 22.446 22.243 22.686 0 146 23 10 0 0 0 0.0019044 1 9015 55.755 29.772 2 1.7541 1.5219 0 55745000 19458000 36287000 2150 681 1131 1249 3463 3463 1125 GPIHSPVELK 10 1 0 Phospho (STY) _GPIHS(ph)PVELK_ GPIHS(1)PVELK GPIHS(106.67)PVELK 0 0 1 0 D9IVD5;A0A024R241;Q16649 D9IVD5 D9IVD5 NFIL3 Nuclear factor interleukin-3-regulated protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 578.7916 2 578.791739 1155.56892 80806.8 0.65431 0.00037871 -0.050264 -2.9092E-05 0.60405 0.00034962 578.791728684188 582.798673899447 74.408 0.67184 74.408 74.074 74.746 0 186 57 4 0 0 0 4.0945E-06 2 37942 106.67 63.386 1 0.80876 1.0106 0 26370000 13716000 12654000 2151 58 1132 1250 3464;3465 3464 71 GPIHSPVELK 10 1 0 Phospho (STY) _GPIHS(ph)PVELK_ GPIHS(1)PVELK GPIHS(121.68)PVELK 0 0 1 0 D9IVD5;A0A024R241;Q16649 D9IVD5 D9IVD5 NFIL3 Nuclear factor interleukin-3-regulated protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 578.7925 2 578.791739 1155.56892 79700.3 0.79238 0.00045862 0.19379 0.00011216 0.98617 0.00057079 578.791836448267 582.798881794138 56.663 1.3344 56.663 55.766 57.1 0 456 113 6 0 0 0 2.5514E-07 3 34527 121.68 88.949 1 1.1487 0.74827 0 41486000 18218000 23268000 2152 58 1132 1250 3466;3467;3468 3466 71 GPIHSPVELK 10 1 0 Phospho (STY) _GPIHS(ph)PVELK_ GPIHS(1)PVELK GPIHS(46.48)PVELK 0 0 1 0 D9IVD5;A0A024R241;Q16649 D9IVD5 D9IVD5 NFIL3 Nuclear factor interleukin-3-regulated protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 388.8682 3 386.196918 1155.56892 95740.2 0.41727 0.00016115 -0.17921 -6.9209E-05 0.23807 9.1941E-05 386.19677574186 388.868193155678 56.666 1.3253 56.666 55.787 57.112 -3.8147E-06 500 112 6 0 0 0 0.0069829 1 34644 46.481 33.904 1 1.1845 0.76853 0 35300000 16074000 19226000 2153 58 1132 1250 3469 3469 71 GPKPEPPGSGSPAPPR 16 1 1 2 Phospho (STY) _GPKPEPPGS(ph)GS(ph)PAPPR_ GPKPEPPGS(1)GS(1)PAPPR GPKPEPPGS(69.48)GS(69.48)PAPPR 0 0 2 1 Q9UKJ3 Q9UKJ3 Q9UKJ3 GPATCH8 G patch domain-containing protein 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 844.8676 2 844.365677 1686.7168 66315.84 0.82605 0.00069748 -0.13588 -0.00011474 0.69016 0.00058275 844.365315413676 853.376950934082 47.439 1.0777 47.439 46.869 47.946 0 362 73 7 0 0 0 2.0013E-05 1 18254 69.485 69.485 1 0.60055 0.68549 0 23058000 14993000 8065200 2154 1235 1133 1251 3470 3470 2526;2527 GPKPEPPGSGSPAPPR 16 1 1 Phospho (STY) _GPKPEPPGSGS(ph)PAPPR_ GPKPEPPGS(0.018)GS(0.982)PAPPR GPKPEPPGS(-17.3)GS(17.3)PAPPR 0 0 1 1 Q9UKJ3 Q9UKJ3 Q9UKJ3 GPATCH8 G patch domain-containing protein 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 542.9332 3 536.590767 1606.75047 82409.12 0.34745 0.00018644 0.33559 0.00018008 0.68304 0.00036651 536.590760886964 542.598643532605 54.408 0.70679 54.408 54.081 54.788 -3.8147E-06 260 53 7 0 0 0 4.647E-10 2 23011 89.507 82.986 2 0.72806 0.84609 0 29867000 16639000 13228000 2155 1235 1133 1252 3471;3472 3472 2526;2527 GPKSDDDGFEIVPIEDPAK 19 2 0 Phospho (STY) _GPKS(ph)DDDGFEIVPIEDPAK_ GPKS(1)DDDGFEIVPIEDPAK GPKS(62.16)DDDGFEIVPIEDPAK 0 0 1 1 B4DKU3;Q8IY81 B4DKU3 B4DKU3 FTSJ3 pre-rRNA processing protein FTSJ3 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1063.4904 2 1054.97482 2107.9351 NaN NaN NaN -0.25716 -0.0002713 NaN NaN NaN NaN 115.69 0.80086 115.69 115.41 116.21 0 0 0 0 1.6663E-08 1 68943 62.162 50.641 1 NaN NaN 0 15976000 0 15976000 2156 632 1134 1253 3473 3473 1041 GPKSDDDGFEIVPIEDPAK 19 2 0 Phospho (STY) _GPKS(ph)DDDGFEIVPIEDPAK_ GPKS(1)DDDGFEIVPIEDPAK GPKS(61.48)DDDGFEIVPIEDPAK 0 0 1 1 B4DKU3;Q8IY81 B4DKU3 B4DKU3 FTSJ3 pre-rRNA processing protein FTSJ3 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1054.9796 2 1054.97482 2107.9351 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.98 1 115.98 115.48 116.48 0 0 0 0 0.00014716 1 69259 61.477 38.944 1 2157 632 1134 1253 3474 3474 1041 GPLSPFNSR 9 0 1 Phospho (STY) _GPLS(ph)PFNSR_ GPLS(0.944)PFNS(0.056)R GPLS(12.27)PFNS(-12.27)R 0 0 1 0 G3V3I3;G3V278;A0A0U1RR71;A1L390 G3V3I3 G3V3I3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 532.7441 2 527.739506 1053.46446 NaN NaN NaN -0.29107 -0.00015361 NaN NaN NaN NaN 91.882 1.0376 91.882 91.278 92.315 0 0 0 0 0.010175 2 58924 56.043 38.573 2 NaN NaN 0 6371400 0 6371400 2158 367 1135 1254 3475;3476 3475 575 GPPDFSSDEEREPTPVLGSGAAAAGR 26 0 2 Phospho (STY) _GPPDFS(ph)SDEEREPTPVLGSGAAAAGR_ GPPDFS(0.437)S(0.437)DEEREPT(0.123)PVLGS(0.003)GAAAAGR GPPDFS(0)S(0)DEEREPT(-5.49)PVLGS(-22.37)GAAAAGR 0 0 1 1 P42166;A0A024RBH7;Q59G12;A0A024RBE7;P42167;G5E972 P42166;A0A024RBE7 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 890.7359 3 884.064211 2649.1708 63807.14 0.91126 0.00080561 -0.25889 -0.00022888 0.65237 0.00057674 884.398248878877 891.070276291606 94.786 1.5021 94.786 93.921 95.423 0 700 122 8 0 0 0 4.4405E-09 1 52613 45.558 37.754 4 0.704 0.87694 0 117180000 64831000 52353000 2159 989;196 1136 1255 3477 3477 306;307;2657 GPPDFSSDEEREPTPVLGSGAAAAGR 26 0 2 Phospho (STY) _GPPDFS(ph)SDEEREPTPVLGSGAAAAGR_ GPPDFS(0.51)S(0.45)DEEREPT(0.04)PVLGSGAAAAGR GPPDFS(0.54)S(-0.54)DEEREPT(-11.01)PVLGS(-50.46)GAAAAGR 0 0 1 1 P42166;A0A024RBH7;Q59G12;A0A024RBE7;P42167;G5E972 P42166;A0A024RBE7 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 884.4016 3 884.064211 2649.1708 64003.25 0.93028 0.00082243 0.2494 0.00022049 1.1797 0.0010429 884.39874400418 891.070726347434 96.173 1.3757 96.173 95.46 96.836 0 1152 136 11 0 0 0 5.6492E-32 1 61665 91.942 91.942 4 1.032 0.90263 0 286590000 137570000 149010000 2160 989;196 1136 1255 3478 3478 306;307;2657 GPPDFSSDEEREPTPVLGSGAAAAGR 26 0 2 2 Phospho (STY) _GPPDFS(ph)S(ph)DEEREPTPVLGSGAAAAGR_ GPPDFS(0.966)S(0.968)DEEREPT(0.066)PVLGS(0.001)GAAAAGR GPPDFS(14.38)S(14.68)DEEREPT(-14.38)PVLGS(-36.23)GAAAAGR 0 0 2 1 P42166;A0A024RBH7;Q59G12;A0A024RBE7;P42167;G5E972 P42166;A0A024RBE7 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 917.7288 3 910.719654 2729.13713 63181.66 1.7633 0.0016058 0.25591 0.00023306 2.0192 0.0018389 911.054090206403 917.726548416064 100.3 1.4738 100.3 99.608 101.08 0 991 114 13 0 0 0 4.6586E-13 2 56963 59.598 53.756 6 0.48545 0.60872 0 578780000 391560000 187220000 2161 989;196 1136 1256 3479;3480 3479 306;307;2657 GPPDFSSDEEREPTPVLGSGAAAAGR 26 0 2 3 Phospho (STY) _GPPDFS(ph)S(ph)DEEREPT(ph)PVLGSGAAAAGR_ GPPDFS(0.999)S(0.999)DEEREPT(0.999)PVLGS(0.003)GAAAAGR GPPDFS(29.47)S(29.47)DEEREPT(29.47)PVLGS(-29.47)GAAAAGR 0 0 3 1 P42166;A0A024RBH7;Q59G12;A0A024RBE7;P42167;G5E972 P42166;A0A024RBE7 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 944.3851 3 937.375098 2809.10346 63003.53 1.4137 0.0013252 -0.12687 -0.00011892 1.2869 0.0012063 937.709317858139 944.381052246178 101.16 1.0021 101.16 100.66 101.66 0 508 79 10 0 0 0 8.7045E-06 1 57872 41.208 38.631 4 0.35525 0.44152 0 68006000 47103000 20903000 2162 989;196 1136 1257 3481 3481 306;307;2657 GPPGPALPATMNNSSSETR 19 0 1 Oxidation (M),Phospho (STY) _GPPGPALPATM(ox)NNS(ph)SSETR_ GPPGPALPATM(1)NNSSSETR GPPGPALPAT(0.167)MNNS(0.514)S(0.139)S(0.139)ET(0.042)R GPPGPALPATM(71.15)NNSSSETR GPPGPALPAT(-4.89)MNNS(4.89)S(-5.68)S(-5.68)ET(-10.91)R 0 1 1 0 A8K4T8;Q15003;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 990.4306 2 990.430061 1978.84557 61857.36 0.46946 0.00046497 -0.07724 -7.6501E-05 0.39222 0.00038847 990.430022885741 995.434357727454 67.688 0.92413 67.688 67.325 68.249 0 351 77 6 0 0 0 1.1324E-08 1 33220 71.153 61.365 5 0.70592 0.89012 0 63516000 31509000 32008000 2163 464 1137 1258 3482 3482 123 802 GPPQSPVFEGVYNNSR 16 0 1 Phospho (STY) _GPPQS(ph)PVFEGVYNNSR_ GPPQS(1)PVFEGVYNNSR GPPQS(75.29)PVFEGVY(-75.29)NNS(-77.94)R 0 0 1 0 H3BUF6;Q8WWM7;H3BSK9 H3BUF6 H3BUF6 ATXN2L Ataxin-2-like protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 919.4138 2 914.406715 1826.79888 65361.34 0.7433 0.00067968 -0.075146 -6.8714E-05 0.66816 0.00061097 914.406852935475 919.411133378898 92.622 0.95732 92.622 92.161 93.118 0 320 84 5 0 0 0 5.0556E-22 2 51229 113.29 101.26 3 1.4019 1.7423 0 36294000 15283000 21012000 2164 875 1138 1259 3483;3484 3483 1485 GPPQSPVFEGVYNNSR 16 0 1 Phospho (STY) _GPPQS(ph)PVFEGVYNNSR_ GPPQS(1)PVFEGVYNNSR GPPQS(47.78)PVFEGVY(-52.94)NNS(-47.78)R 0 0 1 0 H3BUF6;Q8WWM7;H3BSK9 H3BUF6 H3BUF6 ATXN2L Ataxin-2-like protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 919.9084 2 914.406715 1826.79888 63646.35 0.90908 0.00083127 -0.29614 -0.00027079 0.61294 0.00056048 914.406445478957 919.41000902585 96.403 0.95467 96.403 95.928 96.883 0 327 95 6 0 0 0 8.6114E-05 1 61920 64.52 52.497 3 1.3445 1.0573 0 14285000 6591700 7692800 2165 875 1138 1259 3485 3485 1485 GPPSPPAPVMHSPSR 15 0 1 Oxidation (M),Phospho (STY) _GPPS(ph)PPAPVM(ox)HSPSR_ GPPSPPAPVM(1)HSPSR GPPS(1)PPAPVMHSPSR GPPSPPAPVM(43.21)HSPSR GPPS(38.77)PPAPVMHS(-38.77)PS(-38.77)R 0 1 1 0 Q0D2M5;Q6P151;G3V4X8;B7Z9X2;B4DY36;A0A024R6E3;G3V3A4;B4DEG7;Q13573 Q0D2M5 Q0D2M5 SNW1 SNW domain-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 540.9139 3 537.244602 1608.71198 82555.3 0.38607 0.00020741 -0.090112 -4.8412E-05 0.29596 0.000159 537.244469826229 540.580848244418 58.097 0.9279 58.097 57.62 58.547 0 355 75 7 0 0 0 0.0070622 1 25384 43.208 31.833 3 1.6617 2.0583 0 34575000 14732000 19843000 2166 122 1139 1260 3486 3486 25 178;179 GPPSPPAPVMHSPSRK 16 1 1 Oxidation (M),2 Phospho (STY) _GPPS(ph)PPAPVM(ox)HS(ph)PSRK_ GPPSPPAPVM(1)HSPSRK GPPS(0.999)PPAPVMHS(0.829)PS(0.172)RK GPPSPPAPVM(46.35)HSPSRK GPPS(30.63)PPAPVMHS(6.85)PS(-6.85)RK 0 1 2 1 Q0D2M5;Q6P151;G3V4X8;B7Z9X2;B4DY36;A0A024R6E3;G3V3A4;B4DEG7;Q13573 Q0D2M5 Q0D2M5 SNW1 SNW domain-containing protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 606.5994 3 606.598367 1816.77327 76146.41 0.92921 0.00056366 -0.30156 -0.00018293 0.62765 0.00038073 606.59846475527 612.940067048235 31.724 1.1784 31.724 31.161 32.34 0 460 86 7 0 0 0 7.7821E-05 1 16915 46.353 34.731 3 1.3649 1.0522 0 44361000 18736000 25625000 2167 122 1140 1261 3487 3487 25 178;179 GPQGSPLLSR 10 0 1 Phospho (STY) _GPQGS(ph)PLLSR_ GPQGS(1)PLLSR GPQGS(47.5)PLLS(-47.5)R 0 0 1 0 B3KSV4;K7EPA2;Q9HCK3;H0Y966;A0A0A0MR42;K7ENP4;Q8TEP8 B3KSV4 B3KSV4 CEP192;KIAA1569 Centrosomal protein of 192 kDa MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 546.2656 2 546.265888 1090.51722 84408.01 0.55932 0.00030554 0.62581 0.00034186 1.1851 0.00064739 546.266171668867 551.270607541279 59.861 0.96103 59.861 59.25 60.211 0 182 73 4 0 0 0 3.0852E-06 1 26869 103.91 88.28 2 0.55404 0.63819 0 12079000 8127600 3950900 2168 281 1141 1262 3488 3488 441 GPQGSPLLSR 10 0 1 Phospho (STY) _GPQGS(ph)PLLSR_ GPQGS(0.994)PLLS(0.006)R GPQGS(22.55)PLLS(-22.55)R 0 0 1 0 B3KSV4;K7EPA2;Q9HCK3;H0Y966;A0A0A0MR42;K7ENP4;Q8TEP8 B3KSV4 B3KSV4 CEP192;KIAA1569 Centrosomal protein of 192 kDa MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 551.2712 2 546.265888 1090.51722 82494.51 0.88573 0.00048384 0.14507 7.9249E-05 1.0308 0.00056309 546.266130462076 551.27015188386 50.201 0.95226 50.201 49.736 50.689 0 330 89 5 0 0 0 0.0072573 1 30110 62.338 50.57 2 2.9125 2.3199 0 12806000 3853000 8953400 2169 281 1141 1262 3489 3489 441 GPQPPTVSPIR 11 0 1 Phospho (STY) _GPQPPTVS(ph)PIR_ GPQPPTVS(1)PIR GPQPPT(-41.16)VS(41.16)PIR 0 0 1 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 614.808 2 614.80792 1227.60129 77272.98 0.36893 0.00022682 -0.0040665 -2.5001E-06 0.36486 0.00022432 614.807998283169 619.811952800789 73.28 2.1401 73.28 72.349 74.489 0 1082 181 10 0 0 0 8.4725E-14 4 36750 130.56 104.63 2 0.77036 0.977 0 1212700000 675350000 537350000 2170 995 1142 1263 3490;3491;3492;3493 3491 1800 GPQPPTVSPIR 11 0 1 Phospho (STY) _GPQPPTVS(ph)PIR_ GPQPPT(0.03)VS(0.97)PIR GPQPPT(-15.14)VS(15.14)PIR 0 0 1 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 619.8126 2 614.80792 1227.60129 76619.42 0.85627 0.00052644 -0.050887 -3.1286E-05 0.80538 0.00049516 614.808339385244 619.81192218949 72.665 2.4724 72.665 71.716 74.189 0 1605 221 12 0 0 0 0.0010265 3 46558 80.318 54.38 2 0.95037 0.61622 0 598920000 301820000 297100000 2171 995 1142 1263 3494;3495;3496 3496 1800 GPRTPSPPPPIPEDIALGK 19 1 1 2 Phospho (STY) _GPRT(ph)PS(ph)PPPPIPEDIALGK_ GPRT(1)PS(1)PPPPIPEDIALGK GPRT(40.28)PS(40.28)PPPPIPEDIALGK 0 0 2 1 Q5T200;Q6PJ96;A0PJJ2 Q5T200 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 706.6797 3 700.337317 2097.99012 72381.35 0.90351 0.00063276 0.014566 1.0201E-05 0.91808 0.00064297 700.671667984935 706.344918160058 114.06 0.87968 114.06 113.7 114.58 0 466 77 8 0 0 0 0.00075467 1 67876 40.28 36.676 1 1.0903 1.3027 0 104730000 50544000 54190000 2172 1102 1143 1264 3497 3497 2085;2946 GPSPEGSSSTESSPEHPPK 19 1 0 Phospho (STY) _GPSPEGSSSTES(ph)SPEHPPK_ GPSPEGS(0.02)S(0.088)S(0.088)T(0.088)ES(0.358)S(0.358)PEHPPK GPS(-28.88)PEGS(-12.44)S(-6.11)S(-6.11)T(-6.11)ES(0)S(0)PEHPPK 0 0 1 0 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 661.2803 3 658.608991 1972.80514 75660.02 0.89965 0.00059252 -0.11931 -7.8579E-05 0.78034 0.00051394 658.943196889769 661.280204808038 41.058 1.1342 41.058 40.43 41.564 0 596 101 10 0 0 0 1.3835E-05 1 14692 51.526 40.226 7 2.3204 2.7689 0 12863000 4005100 8857900 2173 383 1144 1265 3498 3498 610;611 GPSPFSPVQLHQLR 14 0 1 Phospho (STY) _GPSPFS(ph)PVQLHQLR_ GPSPFS(1)PVQLHQLR GPS(-36.91)PFS(36.91)PVQLHQLR 0 0 1 0 P51531;A0A0U1RQZ9;F6VDE0;F6RS74;A0A0A0MT03;A0A1B0GWA8;A0A1B0GU54;Q56A76 P51531 P51531 SMARCA2 Probable global transcription activator SNF2L2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 548.2737 3 548.27489 1641.80284 84117.63 0.51013 0.00027969 0.22559 0.00012369 0.73573 0.00040338 548.609340018312 551.611079125382 109.53 0.68186 109.53 109.19 109.87 0 149 49 5 0 0 0 6.4539E-05 2 64280 75.911 69.473 2 0.62437 0.74734 0 17075000 9453300 7621900 2174 1004 1145 1266 3499;3500 3499 1831 GPSPSPVGSPASVAQSR 17 0 1 3 Phospho (STY) _GPS(ph)PS(ph)PVGS(ph)PASVAQSR_ GPS(1)PS(1)PVGS(0.966)PAS(0.034)VAQS(0.001)R GPS(47.73)PS(47.73)PVGS(14.58)PAS(-14.58)VAQS(-32.78)R 0 0 3 0 A0A0S2Q0B1;O14497;Q4LE49;H0Y488;A0A1B0GTU5;A0A087WUV6;Q96TA9 A0A0S2Q0B1 A0A0S2Q0B1 ARID1A;ARID1A variant protein AT-rich interactive domain-containing protein 1A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 915.8599 2 910.854489 1819.69442 65854.8 0.58043 0.00052869 0.21608 0.00019681 0.79651 0.0007255 910.854378725034 915.859081180592 65.571 0.72399 65.571 65.189 65.913 0 238 54 6 0 0 0 7.57E-05 2 31395 58.672 52.44 10 1.1927 1.4741 0 33484000 15829000 17655000 2175 344 1146 1267 3501;3502 3502 538;539;540 GPSPSPVGSPASVAQSR 17 0 1 2 Phospho (STY) _GPS(ph)PSPVGS(ph)PASVAQSR_ GPS(0.983)PS(0.021)PVGS(0.823)PAS(0.165)VAQS(0.008)R GPS(17.89)PS(-17.89)PVGS(7)PAS(-7)VAQS(-20.05)R 0 0 2 0 A0A0S2Q0B1;O14497;Q4LE49;H0Y488;A0A1B0GTU5;A0A087WUV6;Q96TA9 A0A0S2Q0B1 A0A0S2Q0B1 ARID1A;ARID1A variant protein AT-rich interactive domain-containing protein 1A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 875.8765 2 870.871324 1739.72809 66197.33 0.63714 0.00055487 0.56744 0.00049416 1.2046 0.001049 870.871333037599 875.876832679404 70.137 0.7438 70.137 69.702 70.446 0 238 72 5 0 0 0 7.4365E-05 1 34756 52.612 46.509 10 1.0767 1.3415 0 37659000 16452000 21207000 2176 344 1146 1268 3503 3503 538;539;540 GPSPSPVGSPASVAQSR 17 0 1 2 Phospho (STY) _GPS(ph)PSPVGS(ph)PASVAQSR_ GPS(0.98)PS(0.028)PVGS(0.938)PAS(0.053)VAQS(0.001)R GPS(16.73)PS(-16.73)PVGS(12.42)PAS(-12.42)VAQS(-29.61)R 0 0 2 0 A0A0S2Q0B1;O14497;Q4LE49;H0Y488;A0A1B0GTU5;A0A087WUV6;Q96TA9 A0A0S2Q0B1 A0A0S2Q0B1 ARID1A;ARID1A variant protein AT-rich interactive domain-containing protein 1A MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 870.8702 2 870.871324 1739.72809 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.81 1 69.81 69.31 70.31 7.6294E-06 0 0 0 5.7103E-06 1 34801 65.287 51.129 10 2177 344 1146 1268 3504 3504 538;539;540 GPSPSPVGSPASVAQSR 17 0 1 Phospho (STY) _GPS(ph)PSPVGSPASVAQSR_ GPS(0.963)PS(0.036)PVGS(0.001)PASVAQSR GPS(14.26)PS(-14.26)PVGS(-31.88)PAS(-37.57)VAQS(-37.44)R 0 0 1 0 A0A0S2Q0B1;O14497;Q4LE49;H0Y488;A0A1B0GTU5;A0A087WUV6;Q96TA9 A0A0S2Q0B1 A0A0S2Q0B1 ARID1A;ARID1A variant protein AT-rich interactive domain-containing protein 1A MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 836.3587 2 830.888158 1659.76176 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.604 1 66.604 66.104 67.104 0 0 0 0 0.0035615 1 32491 41.412 30.151 5 2178 344 1146 1269 3505 3505 538;539;540 GPSPSPVGSPASVAQSR 17 0 1 Phospho (STY) _GPS(ph)PSPVGSPASVAQSR_ GPS(0.909)PS(0.09)PVGS(0.001)PASVAQSR GPS(10.06)PS(-10.06)PVGS(-31.31)PAS(-36.39)VAQS(-37.86)R 0 0 1 0 A0A0S2Q0B1;O14497;Q4LE49;H0Y488;A0A1B0GTU5;A0A087WUV6;Q96TA9 A0A0S2Q0B1 A0A0S2Q0B1 ARID1A;ARID1A variant protein AT-rich interactive domain-containing protein 1A ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 835.895 2 830.888158 1659.76176 NaN NaN NaN -0.15549 -0.0001292 NaN NaN NaN NaN 66.039 0.58966 66.039 65.773 66.363 0 0 0 0 0.0028281 1 41326 41.577 29.964 5 NaN NaN 0 5985300 0 5985300 2179 344 1146 1269 3506 3506 538;539;540 GPSPTPEDVSMK 12 1 0 Oxidation (M),Phospho (STY) _GPS(ph)PTPEDVSM(ox)K_ GPSPTPEDVSM(1)K GPS(0.999)PT(0.001)PEDVSMK GPSPTPEDVSM(88.02)K GPS(32.76)PT(-32.76)PEDVS(-65.44)MK 0 1 1 0 Q7Z4Z4;Q5U0M0;Q53HG9;O95067;H1UBN3 Q7Z4Z4 Q7Z4Z4 CCNB2;CCNB2V G2/mitotic-specific cyclin-B2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 674.783 2 670.775625 1339.5367 73560.24 0.73544 0.00049332 0.048899 3.28E-05 0.78434 0.00052612 670.775680145987 674.782785391311 42.187 1.234 42.187 41.644 42.877 0 575 96 8 0 0 0 0.00018089 3 15329 88.021 74.212 3 0.9835 1.1964 0 18151000 8943300 9207600 2180 940 1147 1270 3507;3508;3509 3508 256 1609 GPSQEEEDNHSDEEDRASEPK 21 1 1 Phospho (STY) _GPSQEEEDNHS(ph)DEEDRASEPK_ GPSQEEEDNHS(0.979)DEEDRAS(0.021)EPK GPS(-94.7)QEEEDNHS(16.59)DEEDRAS(-16.59)EPK 0 0 1 1 E7ERS3;B4DTK7;Q86VM9;H3BPD0;B4DZ24 E7ERS3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 822.6525 3 822.317264 2463.92996 65838.23 0.64768 0.0005326 0.25838 0.00021247 0.90606 0.00074507 822.652071263614 828.32525357022 15.316 0.75856 15.316 15.078 15.836 -9.5367E-07 127 30 11 0 0 0 2.3364E-55 1 2947 131.32 118.47 3 1.0339 0.79752 0 65540000 28949000 36592000 2181 660 1148 1271 3510 3510 1096 GPSWDPFR 8 0 1 Phospho (STY) _GPS(ph)WDPFR_ GPS(1)WDPFR GPS(91.58)WDPFR 0 0 1 0 V9HW43;P04792;F8WE04 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 526.2174 2 521.213124 1040.4117 84950.49 0.37178 0.00019378 0.095762 4.9912E-05 0.46755 0.00024369 521.213117340096 526.217222799073 111.72 1.3841 111.72 111.06 112.44 -7.6294E-06 415 121 5 0 0 0 0.0051019 2 66059 91.584 58.355 1 1.3129 1.6524 0 48954000 23523000 25431000 2182 955 1149 1272 3511;3512 3512 1667 GPSWDPFR 8 0 1 Phospho (STY) _GPS(ph)WDPFR_ GPS(1)WDPFR GPS(51.34)WDPFR 0 0 1 0 V9HW43;P04792;F8WE04 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 526.2172 2 521.213124 1040.4117 87682.2 0.92852 0.00048396 -0.42167 -0.00021978 0.50685 0.00026418 521.212948777929 526.216852656153 116.96 0.57333 116.96 116.68 117.26 7.6294E-06 108 54 4 0 0 0 0.020084 2 75263 51.335 31.032 1 0.85144 0.70773 0 4144500 2470800 1673700 2183 955 1149 1272 3513;3514 3513 1667 GPYESGSGHSSGLGHQESR 19 0 1 Unmodified _GPYESGSGHSSGLGHQESR_ 0 0 0 0 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 CON__Q86YZ3 HRNR Hornerin ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 643.6215 3 643.620903 1927.84088 NaN NaN NaN -0.49489 -0.00031852 NaN NaN NaN NaN 67.756 0.3585 67.756 67.608 67.966 0 0 0 0 0.00010224 1 33436 50.957 39.001 1 NaN NaN 0 9153300 9153300 0 + 2184 761 1150 1273 3515 3515 GPYESGSGHSSGLGHR 16 0 1 Unmodified _GPYESGSGHSSGLGHR_ 0 0 0 0 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 CON__Q86YZ3 HRNR Hornerin ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 528.9089 3 528.909837 1583.70768 NaN NaN NaN -0.64115 -0.00033911 NaN NaN NaN NaN 71.916 0.24831 71.916 71.723 71.971 0 0 0 0 0.022554 1 36203 38.995 23.36 1 NaN NaN 0 6159600 6159600 0 + 2185 761 1151 1274 3516 3516 GPYESGSGHSSGLGHR 16 0 1 Unmodified _GPYESGSGHSSGLGHR_ 0 0 0 0 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 CON__Q86YZ3 HRNR Hornerin ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 528.9102 3 528.909837 1583.70768 NaN NaN NaN -0.96704 -0.00051147 NaN NaN NaN NaN 72.09 0.35483 72.09 71.98 72.335 0 0 0 0 0.0054533 2 36395 46.319 33.486 1 NaN NaN 0 15188000 15188000 0 + 2186 761 1151 1274 3517;3518 3517 GPYESGSGHSSGLGHR 16 0 1 Unmodified _GPYESGSGHSSGLGHR_ 0 0 0 0 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 CON__Q86YZ3 HRNR Hornerin ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 529.244 3 528.909837 1583.70768 NaN NaN NaN -0.14784 -7.8192E-05 NaN NaN NaN NaN 15.811 0.24726 15.811 15.689 15.936 -9.5367E-07 0 0 0 0.013116 1 3295 42.314 29.759 1 NaN NaN 0 5466100 5466100 0 + 2187 761 1151 1274 3519 3519 GQESSSDQEQVDVESIDFSK 20 1 0 2 Phospho (STY) _GQES(ph)S(ph)SDQEQVDVESIDFSK_ GQES(0.667)S(0.667)S(0.667)DQEQVDVESIDFSK GQES(0)S(0)S(0)DQEQVDVES(-46.99)IDFS(-63.55)K 0 0 2 0 Q96JM3 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1187.957 2 1187.454 2372.89344 56480.49 0.51815 0.00061527 -0.3898 -0.00046287 0.12834 0.0001524 1187.95533925426 1191.45933560212 105.28 0.77354 105.28 104.91 105.69 0 307 52 8 0 0 0 2.1631E-08 1 60935 65.092 57.89 10 0.58426 0.74128 0 40941000 24546000 16395000 2188 1180 1152 1275 3520 3520 2317;2318;2319 GQGASRPHAPGTPAGR 16 0 2 Unmodified _GQGASRPHAPGTPAGR_ 0 0 0 1 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 506.2626 3 506.262433 1515.76547 85641.24 0.25074 0.00012694 0.17535 8.8773E-05 0.42609 0.00021571 506.26236091675 512.934645705823 67.968 0.60766 67.968 67.792 68.399 0 165 49 5 0 0 0 1.1142E-21 2 33536 98.281 98.281 1 0.86491 1.0754 0 74938000 37257000 37681000 2189 1162 1153 1276 3521;3522 3522 GQGTPPSGPGVVR 13 0 1 Phospho (STY) _GQGT(ph)PPSGPGVVR_ GQGT(1)PPSGPGVVR GQGT(67.98)PPS(-67.98)GPGVVR 0 0 1 0 Q9UMN6 Q9UMN6 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 644.8064 2 644.805909 1287.59726 76495.3 0.67568 0.00043568 0.11534 7.437E-05 0.79101 0.00051005 644.805923064081 649.810091413182 51.489 1.1143 51.489 50.848 51.962 -3.8147E-06 451 89 7 0 0 0 5.6498E-10 2 20978 109.6 77.611 2 0.50895 0.61135 0 17935000 10421000 7514500 2190 1240 1154 1277 3523;3524 3523 3003 GQGTPPSGPGVVR 13 0 1 Phospho (STY) _GQGT(ph)PPSGPGVVR_ GQGT(1)PPSGPGVVR GQGT(39.05)PPS(-39.05)GPGVVR 0 0 1 0 Q9UMN6 Q9UMN6 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 644.8071 2 644.805909 1287.59726 76539.75 1.1443 0.00073782 -0.33768 -0.00021774 0.80657 0.00052008 644.805761938169 649.809791944253 41.931 1.1176 41.931 41.355 42.473 0 531 94 8 0 0 0 0.030265 1 24462 64.374 50.658 2 1.2729 0.86265 0 66483000 29832000 36651000 2191 1240 1154 1277 3525 3525 3003 GQHEPSKPPPAGETVTGGFGAK 22 2 0 Unmodified _GQHEPSKPPPAGETVTGGFGAK_ 0 0 0 1 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 717.3627 3 717.02727 2148.05998 73328.16 0.84035 0.00060255 0.34941 0.00025053 1.1898 0.00085308 717.361594974277 722.704863164337 98.163 0.95965 98.163 97.653 98.613 0 223 79 5 0 0 0 0.0048036 1 55419 30.882 30.882 1 0.64816 0.7465 0 20167000 8698600 11468000 2192 1207 1155 1278 3526 3526 GQHEPSKPPPAGETVTGGFGAK 22 2 0 Unmodified _GQHEPSKPPPAGETVTGGFGAK_ 0 0 0 1 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 538.0226 4 538.022272 2148.05998 81828.62 0.64701 0.00034811 0.094886 5.1051E-05 0.7419 0.00039916 538.272896546795 542.029552596826 98.034 1.2512 98.034 97.539 98.79 0 331 101 6 0 0 0 2.904E-05 3 55472 38.583 38.583 1 0.68218 0.85572 0 47913000 24912000 23000000 2193 1207 1155 1278 3527;3528;3529 3527 GQHEPSKPPPAGETVTGGFGAK 22 2 0 Unmodified _GQHEPSKPPPAGETVTGGFGAK_ 0 0 0 1 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 542.0287 4 538.022272 2148.05998 NaN NaN NaN -0.7224 -0.00038867 NaN NaN NaN NaN 98.43 0.54129 98.43 98.345 98.886 -7.6294E-06 0 0 0 0.030576 1 56058 17.998 7.6589 1 NaN NaN 0 14865000 0 14865000 2194 1207 1155 1278 3530 3530 GQNLLQTQDHAK 12 1 0 Unmodified _GQNLLQTQDHAK_ 0 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 680.8572 2 676.84949 1351.68443 NaN NaN NaN 0.39973 0.00027056 NaN NaN NaN NaN 69.213 0.30503 69.213 68.982 69.287 0 0 0 0 2.553E-57 2 34336 150.61 121.88 1 NaN NaN 0 11309000 0 11309000 2195 994 1156 1279 3531;3532 3531 GQNLLQTQDHAK 12 1 0 Unmodified _GQNLLQTQDHAK_ 0 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 680.8565 2 676.84949 1351.68443 NaN NaN NaN 0.13437 9.095E-05 NaN NaN NaN NaN 69.879 0.25145 69.879 69.796 70.048 0 0 0 0 1.1016E-05 1 34873 88.495 63.11 1 NaN NaN 0 4602200 0 4602200 2196 994 1156 1279 3533 3533 GQNLLQTQDHAK 12 1 0 Unmodified _GQNLLQTQDHAK_ 0 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 676.8492 2 676.84949 1351.68443 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.164 1 69.164 68.664 69.664 0 0 0 0 0.010732 1 34406 97.456 76.484 1 2197 994 1156 1279 3534 3534 GQNLLQTQDHAK 12 1 0 Unmodified _GQNLLQTQDHAK_ 0 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 676.8481 2 676.84949 1351.68443 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.064 1 70.064 69.564 70.564 0 0 0 0 0.0012099 1 34976 58.592 43.918 1 2198 994 1156 1279 3535 3535 GQNLLQTQDHAK 12 1 0 Unmodified _GQNLLQTQDHAK_ 0 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 680.8578 2 676.84949 1351.68443 73679.06 0.5078 0.0003437 -0.18377 -0.00012438 0.32404 0.00021932 676.8501972361 680.857143070549 24.216 0.51686 24.216 23.854 24.371 0 112 30 8 0 0 0 3.8899E-33 1 10593 182.64 182.64 1 3.6133 2.6977 0 18984000 3844200 15140000 2199 994 1156 1279 3536 3536 GQRASLEAAIADAEQR 16 0 2 Phospho (STY) _GQRAS(ph)LEAAIADAEQR_ GQRAS(1)LEAAIADAEQR GQRAS(57.83)LEAAIADAEQR 0 0 1 1 CON__P05787;P05787;Q969I0;Q7L4M3;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 595.9509 3 589.27914 1764.81559 79842.42 0.99025 0.00058353 -0.13573 -7.9983E-05 0.85452 0.00050355 589.279032869734 595.951459128614 95.661 0.73969 95.661 95.302 96.041 0 227 66 5 0 0 0 4.5798E-05 1 53829 57.826 30.49 1 0.39809 0.48923 0 26505000 17328000 9176700 + 2200 754 1157 1280 3537 3537 1267 GQRASLEAAIADAEQR 16 0 2 Phospho (STY) _GQRAS(ph)LEAAIADAEQR_ GQRAS(1)LEAAIADAEQR GQRAS(42.06)LEAAIADAEQR 0 0 1 1 CON__P05787;P05787;Q969I0;Q7L4M3;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 883.4167 2 883.415072 1764.81559 NaN NaN NaN 0.33653 0.0002973 NaN NaN NaN NaN 95.709 0.26048 95.709 95.594 95.855 -7.6294E-06 0 0 0 0.0086744 1 53809 42.059 27.94 1 NaN NaN 0 8334700 8334700 0 + 2201 754 1157 1280 3538 3538 1267 GQRASLEAAIADAEQR 16 0 2 Phospho (STY) _GQRAS(ph)LEAAIADAEQR_ GQRAS(1)LEAAIADAEQR GQRAS(44.86)LEAAIADAEQR 0 0 1 1 CON__P05787;P05787;Q969I0;Q7L4M3;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 589.2804 3 589.27914 1764.81559 78688.82 1.1292 0.0006654 -0.37988 -0.00022385 0.7493 0.00044155 589.278873114372 595.951147166257 90.13 0.70406 90.13 89.841 90.545 0 353 67 8 0 0 0 0.00014584 1 57937 44.863 35.7 1 0.84141 0.728 0 31801000 15882000 15919000 + 2202 754 1157 1280 3539 3539 1267 GQSLGYAFAEFQEHEHALK 19 1 0 Unmodified _GQSLGYAFAEFQEHEHALK_ 0 0 0 0 A0A024R753;Q9NW13 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 724.3553 3 721.348232 2161.02287 75404.68 1.1789 0.00085042 0.7614 0.00054923 1.9403 0.0013996 721.683239872988 724.354211594771 110.2 0.32418 110.2 110.04 110.36 0 78 27 5 0 0 0 0.026255 1 70843 18.058 18.058 1 0.84839 0.70572 0 5504900 2792000 2712900 2203 128 1158 1281 3540 3540 GQSPAGDGSPEPPTPR 16 0 1 Phospho (STY) _GQSPAGDGS(ph)PEPPTPR_ GQSPAGDGS(1)PEPPTPR GQS(-93.47)PAGDGS(43.63)PEPPT(-43.63)PR 0 0 1 0 A0A0A0MRW6;B4DF80;Q9H6R4 A0A0A0MRW6 A0A0A0MRW6 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 820.3538 2 815.348866 1628.68318 68579.24 0.94758 0.00077261 0.070165 5.7209E-05 1.0177 0.00082982 815.348819652634 820.353140606439 47.353 1.4135 47.353 46.369 47.782 0 463 97 8 0 0 0 8.6806E-43 2 18145 138.56 107.56 3 1.5195 1.869 0 25413000 7866800 17546000 2204 289 1159 1282 3541;3542 3541 458;459 GQSPAGDGSPEPPTPR 16 0 1 Phospho (STY) _GQS(ph)PAGDGSPEPPTPR_ GQS(1)PAGDGSPEPPTPR GQS(59.35)PAGDGS(-59.35)PEPPT(-74.93)PR 0 0 1 0 A0A0A0MRW6;B4DF80;Q9H6R4 A0A0A0MRW6 A0A0A0MRW6 NOL6 Nucleolar protein 6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 820.3535 2 815.348866 1628.68318 68039.16 0.87427 0.00071283 -0.029864 -2.4349E-05 0.84441 0.00068849 815.348849142857 820.352873330373 48.949 1.0917 48.949 48.376 49.467 0 503 78 8 0 0 0 3.665E-09 1 19163 85.563 66.319 3 1.0293 1.2953 0 48342000 23896000 24445000 2205 289 1159 1282 3543 3543 458;459 GQSPAGDGSPEPPTPR 16 0 1 Phospho (STY) _GQSPAGDGS(ph)PEPPTPR_ GQS(0.001)PAGDGS(0.97)PEPPT(0.029)PR GQS(-31.25)PAGDGS(15.24)PEPPT(-15.24)PR 0 0 1 0 A0A0A0MRW6;B4DF80;Q9H6R4 A0A0A0MRW6 A0A0A0MRW6 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 815.8517 2 815.348866 1628.68318 67951.67 0.99988 0.00081525 0.28318 0.00023089 1.2831 0.0010461 815.348892547848 820.353409812671 38.826 1.2864 38.826 38.178 39.464 3.8147E-06 574 112 8 0 0 0 0.00012742 1 22176 56.036 44.516 3 1.5226 1.038 0 52326000 21775000 30551000 2206 289 1159 1282 3544 3544 458;459 GQSPAGDGSPEPPTPR 16 0 1 Phospho (STY) _GQS(ph)PAGDGSPEPPTPR_ GQS(1)PAGDGSPEPPTPR GQS(60.8)PAGDGS(-60.8)PEPPT(-90.52)PR 0 0 1 0 A0A0A0MRW6;B4DF80;Q9H6R4 A0A0A0MRW6 A0A0A0MRW6 NOL6 Nucleolar protein 6 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 820.3541 2 815.348866 1628.68318 67974.68 1.0775 0.00087857 -0.2756 -0.00022471 0.80194 0.00065386 815.348687688936 820.353028327412 41.769 0.98807 41.769 41.282 42.27 -3.8147E-06 536 84 8 0 0 0 6.6893E-16 2 24360 103.04 77.593 3 1.3288 0.89537 0 88577000 39443000 49134000 2207 289 1159 1282 3545;3546 3545 458;459 GQVIIISDSDDDDDER 16 0 1 2 Phospho (STY) _GQVIIIS(ph)DS(ph)DDDDDER_ GQVIIIS(1)DS(1)DDDDDER GQVIIIS(54.23)DS(54.23)DDDDDER 0 0 2 0 A0A024R8E8;Q7Z333 A0A024R8E8 A0A024R8E8 SETX Probable helicase senataxin ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 976.3649 2 976.363922 1950.71329 NaN NaN NaN -0.17325 -0.00016916 NaN NaN NaN NaN 92.059 0.45942 92.059 91.848 92.307 -7.6294E-06 0 0 0 4.1393E-05 1 50894 54.234 40.076 1 NaN NaN 0 14361000 14361000 0 2208 151 1160 1283 3547 3547 232;233 GQVVENNSVTEFSEEK 16 1 0 Phospho (STY) _GQVVENNS(ph)VTEFSEEK_ GQVVENNS(0.709)VT(0.284)EFS(0.007)EEK GQVVENNS(3.98)VT(-3.98)EFS(-20.15)EEK 0 0 1 0 Q9NVB0;Q9BVS4;H0Y919 Q9NVB0 Q9NVB0 RIOK2 Serine/threonine-protein kinase RIO2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 942.4147 2 938.404035 1874.79352 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.856 1 72.856 72.356 73.356 0 0 0 0 0.00019088 1 36993 57.148 42.729 3 2209 1200 1161 1284 3548 3548 2390 GREVSPSDVR 10 0 2 Phospho (STY) _GREVS(ph)PSDVR_ GREVS(0.989)PS(0.011)DVR GREVS(19.48)PS(-19.48)DVR 0 0 1 1 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 601.2775 2 591.269159 1180.52377 79284.88 0.40388 0.0002388 0.34545 0.00020426 0.74934 0.00044306 591.269435004877 601.27756741614 52.73 1.1119 52.73 52.101 53.213 0 374 88 6 0 0 0 0.00097957 1 21822 78.903 67.055 2 1.1328 1.3919 0 26345000 12639000 13705000 2210 1170 1162 1285 3549 3549 2289 GREVSPSDVR 10 0 2 Phospho (STY) _GREVS(ph)PSDVR_ GREVS(0.913)PS(0.087)DVR GREVS(10.2)PS(-10.2)DVR 0 0 1 1 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 591.2697 2 591.269159 1180.52377 78477.66 0.23626 0.0001397 0.60204 0.00035597 0.83831 0.00049567 591.269450675499 601.277800310342 22.937 0.46783 22.937 22.716 23.184 0 143 24 9 0 0 0 0.018297 1 9558 40.767 32.427 2 1.6743 1.4565 0 95572000 34649000 60922000 2211 1170 1162 1285 3550 3550 2289 GRGPSPEGSSSTESSPEHPPK 21 1 1 2 Phospho (STY) _GRGPSPEGSSSTES(ph)S(ph)PEHPPK_ GRGPSPEGS(0.003)S(0.008)S(0.027)T(0.124)ES(0.918)S(0.919)PEHPPK GRGPS(-45.46)PEGS(-31.95)S(-26.35)S(-19.9)T(-11.73)ES(11.73)S(11.73)PEHPPK 0 0 2 1 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 756.6405 3 756.305293 2265.89405 69928.4 0.94327 0.0007134 0.08852 6.6948E-05 1.0318 0.00078035 756.639652145995 762.31312001969 47.138 1.6625 47.138 46.069 47.731 3.8147E-06 713 117 11 0 0 0 5.8755E-10 1 18218 62.605 55.411 21 1.2004 1.4298 0 82510000 33243000 49267000 2212 383 1163 1286 3551 3551 610;611 GRGPSPEGSSSTESSPEHPPK 21 1 1 Phospho (STY) _GRGPSPEGSSSTES(ph)SPEHPPK_ GRGPSPEGS(0.004)S(0.031)S(0.08)T(0.08)ES(0.436)S(0.369)PEHPPK GRGPS(-51.46)PEGS(-20.15)S(-11.48)S(-7.36)T(-7.36)ES(0.73)S(-0.73)PEHPPK 0 0 1 1 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 547.7404 4 547.489206 2185.92772 79924.89 0.76756 0.00042023 -0.17721 -9.7021E-05 0.59035 0.00032321 547.739893321441 552.245413784856 17.63 0.4989 17.63 17.374 17.873 0 123 19 10 0 0 0 3.6303E-09 1 4851 55.588 47.094 7 1.2563 0.96631 0 31509000 14318000 17191000 2213 383 1163 1287 3552 3552 610;611 GRHEVGALVR 10 0 2 Unmodified _GRHEVGALVR_ 0 0 0 1 B9A008;E7ENR5;B8ZZ47;H0Y714;Q96G21 B9A008 B9A008 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 365.2122 3 365.212351 1092.61522 NaN NaN NaN NaN NaN NaN NaN NaN NaN 127.71 1 127.71 127.21 128.21 7.6294E-06 0 0 0 0.0065151 1 77507 46.406 30.791 1 2214 727 1164 1288 3553 3553 GRHEVGALVR 10 0 2 Unmodified _GRHEVGALVR_ 0 0 0 1 B9A008;E7ENR5;B8ZZ47;H0Y714;Q96G21 B9A008 B9A008 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 371.8846 3 365.212351 1092.61522 NaN NaN NaN NaN NaN NaN NaN NaN NaN 145.59 1 145.59 145.09 146.09 0 0 0 0 0.023227 1 83951 33.961 21.384 1 2215 727 1164 1288 3554 3554 GRLSPVPVPR 10 0 2 Phospho (STY) _GRLS(ph)PVPVPR_ GRLS(1)PVPVPR GRLS(99.75)PVPVPR 0 0 1 1 A8K4T9;Q53GL6;Q5QPM1;Q5QPL9;Q9UKM9;Q5QPM0 A8K4T9 A8K4T9 RALY RNA-binding protein Raly MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 579.3131 2 579.313173 1156.61179 79157.69 0.41537 0.00024063 0.010751 6.228E-06 0.42612 0.00024686 579.313069771207 589.32145031084 83.102 2.6533 83.102 82.175 84.829 0 916 246 5 0 0 0 4.8236E-06 7 45287 99.752 77.759 1 0.84457 1.0535 0 165100000 89205000 75900000 2216 465 1165 1289 3555;3556;3557;3558;3559;3560;3561 3559 812 GRLSPVPVPR 10 0 2 Phospho (STY) _GRLS(ph)PVPVPR_ GRLS(1)PVPVPR GRLS(46.06)PVPVPR 0 0 1 1 A8K4T9;Q53GL6;Q5QPM1;Q5QPL9;Q9UKM9;Q5QPM0 A8K4T9 A8K4T9 RALY RNA-binding protein Raly MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 386.5444 3 386.544541 1156.61179 95763.63 -0.42472 -0.00016417 0.4941 0.00019099 0.069385 2.682E-05 386.544636933962 393.216919010245 83.257 2.4472 83.257 82.265 84.712 0 629 227 6 0 0 0 0.00609 1 44783 46.063 26.301 1 0.89975 1.1203 0 105200000 47772000 57423000 2217 465 1165 1289 3562 3562 812 GRLSPVPVPR 10 0 2 Phospho (STY) _GRLS(ph)PVPVPR_ GRLS(1)PVPVPR GRLS(62.34)PVPVPR 0 0 1 1 A8K4T9;Q53GL6;Q5QPM1;Q5QPL9;Q9UKM9;Q5QPM0 A8K4T9 A8K4T9 RALY RNA-binding protein Raly MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 579.314 2 579.313173 1156.61179 77580.8 0.76512 0.00044324 0.10005 5.7959E-05 0.86517 0.0005012 579.313279401032 589.321397469876 70.621 1.9813 70.621 69.486 71.468 7.6294E-06 940 173 8 0 0 0 0.005639 2 44409 62.338 50.175 1 0.7174 0.62594 0 174360000 101840000 72522000 2218 465 1165 1289 3563;3564 3563 812 GRLTPSPDIIVLSDNEASSPR 21 0 2 2 Phospho (STY) _GRLT(ph)PS(ph)PDIIVLSDNEASSPR_ GRLT(1)PS(1)PDIIVLSDNEASSPR GRLT(41.63)PS(42.12)PDIIVLS(-41.63)DNEAS(-58.54)S(-61.74)PR 0 0 2 1 A0A0U1RRM1;B3KSZ4;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 795.702 3 795.368005 2383.08219 68242.54 0.87203 0.00069358 -0.10701 -8.5116E-05 0.76502 0.00060847 795.7019896805 802.039919915508 115.35 0.70226 115.35 115 115.71 0 329 58 8 0 0 0 7.1632E-12 1 68685 63.491 56.459 10 0.7759 0.96198 0 37983000 19503000 18480000 2219 369 1166 1290 3565 3565 584;585;586;587;2696 GRLTPSPDIIVLSDNEASSPR 21 0 2 2 Phospho (STY) _GRLT(ph)PS(ph)PDIIVLSDNEASSPR_ GRLT(1)PS(1)PDIIVLSDNEASSPR GRLT(59.41)PS(59.02)PDIIVLS(-59.02)DNEAS(-64.08)S(-64.06)PR 0 0 2 1 A0A0U1RRM1;B3KSZ4;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 802.0424 3 795.368005 2383.08219 68149.51 1.223 0.00097275 0.47712 0.00037949 1.7001 0.0013522 795.368747526012 802.040604752482 122.58 0.7991 122.58 122.28 123.08 7.6294E-06 506 72 10 0 0 0 5.3952E-12 1 79346 65.765 65.765 10 1.9592 1.6958 0 34748000 11407000 23341000 2220 369 1166 1290 3566 3566 584;585;586;587;2696 GRLTPSPDIIVLSDNEASSPR 21 0 2 3 Phospho (STY) _GRLT(ph)PS(ph)PDIIVLSDNEASS(ph)PR_ GRLT(1)PS(1)PDIIVLSDNEAS(0.115)S(0.885)PR GRLT(61.39)PS(59.9)PDIIVLS(-35.26)DNEAS(-8.87)S(8.87)PR 0 0 3 1 A0A0U1RRM1;B3KSZ4;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 822.3582 3 822.023448 2463.04852 66563.61 0.78278 0.00064346 0.23673 0.0001946 1.0195 0.00083806 822.357978755179 828.695943325765 121.23 1.1079 121.23 120.79 121.9 0 730 85 12 0 0 0 1.661E-14 5 73483 74.45 65.518 10 0.67609 0.84625 0 375630000 221000000 154630000 2221 369 1166 1291 3567;3568;3569;3570;3571 3570 584;585;586;587;2696 GRLTPSPDIIVLSDNEASSPR 21 0 2 3 Phospho (STY) _GRLT(ph)PS(ph)PDIIVLSDNEAS(ph)SPR_ GRLT(1)PS(1)PDIIVLS(0.051)DNEAS(0.555)S(0.395)PR GRLT(45.76)PS(42.98)PDIIVLS(-10.38)DNEAS(1.48)S(-1.48)PR 0 0 3 1 A0A0U1RRM1;B3KSZ4;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 828.6974 3 822.023448 2463.04852 66500.45 0.99445 0.00081746 0.21484 0.00017661 1.2093 0.00099407 822.35808222017 829.03000460129 132.17 1.396 132.17 131.68 133.08 -1.5259E-05 1086 131 13 0 0 0 1.9286E-06 1 85451 49.567 45.691 10 2.1162 1.8481 0 208910000 69420000 139490000 2222 369 1166 1291 3572 3572 584;585;586;587;2696 GRPPAEKLSPNPPK 14 2 1 Phospho (STY) _GRPPAEKLS(ph)PNPPK_ GRPPAEKLS(1)PNPPK GRPPAEKLS(82.88)PNPPK 0 0 1 2 P51531;A0A0U1RQZ9;F6VDE0;A0A0U1RRG6;B4DSC8;A0A0U1RRD6;A0A0U1RRF8;A0A0A0MSS5;F6UH26;A0A0U1RQU0;A0A0U1RR09;F6XE55;A0A0U1RQW7;A0A0U1RRN2;B1ALG1;A0A0U1RR83;A0A0U1RQX3;F6T8Q0;B1ALG2;A0A0U1RR26;B4DNT1;Q8N9Q1;B1ALF6;A0A0U1RRJ4 P51531 P51531 SMARCA2 Probable global transcription activator SNF2L2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 531.9502 3 523.271257 1566.79194 83208.26 0.37051 0.00019388 -0.15193 -7.9501E-05 0.21858 0.00011438 523.27125766447 531.950016972338 72.022 0.67991 72.022 71.63 72.31 0 282 59 7 0 0 0 2.7798E-06 2 36231 82.877 68.623 1 0.58484 0.68751 0 67227000 43945000 23281000 2223 1004 1167 1292 3573;3574 3573 1832 GRPPAEKLSPNPPK 14 2 1 Phospho (STY) _GRPPAEKLS(ph)PNPPK_ GRPPAEKLS(1)PNPPK GRPPAEKLS(133.93)PNPPK 0 0 1 2 P51531;A0A0U1RQZ9;F6VDE0;A0A0U1RRG6;B4DSC8;A0A0U1RRD6;A0A0U1RRF8;A0A0A0MSS5;F6UH26;A0A0U1RQU0;A0A0U1RR09;F6XE55;A0A0U1RQW7;A0A0U1RRN2;B1ALG1;A0A0U1RR83;A0A0U1RQX3;F6T8Q0;B1ALG2;A0A0U1RR26;B4DNT1;Q8N9Q1;B1ALF6;A0A0U1RRJ4 P51531 P51531 SMARCA2 Probable global transcription activator SNF2L2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 523.2719 3 523.271257 1566.79194 83039.34 0.74768 0.00039124 -0.27514 -0.00014397 0.47254 0.00024727 523.271139303131 531.950007066012 26.708 1.8519 26.708 26.149 28.001 1.9073E-06 687 107 9 0 0 0 5.5036E-28 2 13222 133.93 116.44 1 1.6514 1.3394 0 145360000 51825000 93539000 2224 1004 1167 1292 3575;3576 3576 1832 GRPPAEKLSPNPPK 14 2 1 Phospho (STY) _GRPPAEKLS(ph)PNPPK_ GRPPAEKLS(1)PNPPK GRPPAEKLS(48.18)PNPPK 0 0 1 2 P51531;A0A0U1RQZ9;F6VDE0;A0A0U1RRG6;B4DSC8;A0A0U1RRD6;A0A0U1RRF8;A0A0A0MSS5;F6UH26;A0A0U1RQU0;A0A0U1RR09;F6XE55;A0A0U1RQW7;A0A0U1RRN2;B1ALG1;A0A0U1RR83;A0A0U1RQX3;F6T8Q0;B1ALG2;A0A0U1RR26;B4DNT1;Q8N9Q1;B1ALF6;A0A0U1RRJ4 P51531 P51531 SMARCA2 Probable global transcription activator SNF2L2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 797.4221 2 784.403247 1566.79194 70901.27 1.0049 0.00078827 -0.11273 -8.8423E-05 0.89221 0.00069985 784.403172884592 797.421418501489 26.806 1.1857 26.806 26.295 27.48 0 218 67 6 0 0 0 0.0012295 1 12763 48.177 38.895 1 1.9168 1.6103 0 15542000 5511000 10031000 2225 1004 1167 1292 3577 3577 1832 GRPPAEKLSPNPPNLTK 17 2 1 Phospho (STY) _GRPPAEKLS(ph)PNPPNLTK_ GRPPAEKLS(1)PNPPNLTK GRPPAEKLS(110.23)PNPPNLT(-110.23)K 0 0 1 2 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;B3KNW7;B4E0F1;B4DSI8 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 641.3425 3 632.662814 1894.96661 75353.69 0.71721 0.00045375 -0.035593 -2.2518E-05 0.68161 0.00043123 632.66276593047 641.341681586221 88.775 1.9313 88.775 87.651 89.582 0 868 172 6 0 0 0 1.8043E-62 5 48513 165.06 158 2 0.72656 0.85466 0 75988000 44656000 31332000 2226 434 1168 1293 3578;3579;3580;3581;3582 3581 753 GRPPAEKLSPNPPNLTK 17 2 1 Phospho (STY) _GRPPAEKLS(ph)PNPPNLTK_ GRPPAEKLS(1)PNPPNLTK GRPPAEKLS(38.02)PNPPNLT(-38.02)K 0 0 1 2 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;B3KNW7;B4E0F1;B4DSI8 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 632.6635 3 632.662814 1894.96661 74631.73 1.0738 0.00067937 -0.017261 -1.092E-05 1.0566 0.00066845 632.997110600275 641.341593617747 63.637 1.9563 63.637 62.732 64.689 3.8147E-06 1286 176 10 0 0 0 1.8656E-05 2 40152 58.107 58.107 2 2.0421 1.6312 0 384520000 131980000 252540000 2227 434 1168 1293 3583;3584 3584 753 GRPRPSPLVK 10 1 2 Phospho (STY) _GRPRPS(ph)PLVK_ GRPRPS(1)PLVK GRPRPS(48.11)PLVK 0 0 1 2 Q27J81 Q27J81 Q27J81 INF2 Inverted formin-2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 396.2192 3 396.220057 1185.63834 95254.12 -0.18958 -7.5116E-05 -0.24144 -9.5664E-05 -0.43102 -0.00017078 396.220103358717 405.563735155792 21.808 0.48816 21.808 21.517 22.006 0 85 23 6 0 0 0 0.0043547 1 8492 48.115 48.115 1 0.79692 0.80594 0 9891900 5924700 3967200 2228 1083 1169 1294 3585 3585 2040 GRSPPERPVPGTPK 14 1 2 Phospho (STY) _GRS(ph)PPERPVPGTPK_ GRS(1)PPERPVPGTPK GRS(55.99)PPERPVPGT(-55.99)PK 0 0 1 2 Q9Y4B5 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 518.9314 3 518.931123 1553.77154 83012.98 0.13719 7.1192E-05 0.3466 0.00017986 0.48379 0.00025105 518.93140636273 528.274679809149 22.557 0.53331 22.557 22.283 22.816 0 171 28 8 0 0 0 1.8957E-05 1 9135 79.676 63.792 2 0.71813 0.6554 0 60135000 34648000 25487000 2229 1253 1170 1295 3586 3586 2581 GSALAALHCGRPPESPVNYGSPPSIADTLFSR 32 0 2 2 Phospho (STY) _GSALAALHCGRPPES(ph)PVNYGS(ph)PPSIADTLFSR_ GS(0.412)ALAALHCGRPPES(0.475)PVNY(0.384)GS(0.716)PPS(0.013)IADTLFSR GS(-1.05)ALAALHCGRPPES(1.05)PVNY(-3.85)GS(4.08)PPS(-17.85)IADT(-34.61)LFS(-38.65)R 0 0 2 1 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 872.1511 4 871.899369 3483.56837 64713.86 0.77125 0.00067245 -0.14496 -0.00012639 0.62629 0.00054606 872.149835104403 877.404871459969 133.4 0.57112 133.4 132.92 133.49 0 239 41 11 0 0 0 6.5377E-08 2 81162 41.021 41.021 21 0.86692 1.0777 0 72772000 36316000 36456000 2230 1167 1171 1296 3587;3588 3588 2264;2265 GSAVDASVQEESPVTK 16 1 0 Phospho (STY) _GSAVDASVQEES(ph)PVTK_ GSAVDAS(0.019)VQEES(0.729)PVT(0.253)K GS(-41.77)AVDAS(-15.93)VQEES(4.6)PVT(-4.6)K 0 0 1 0 O95613;Q9H848;Q8IWJ7 O95613 O95613 PCNT Pericentrin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 846.3852 2 842.377289 1682.74003 68164.31 0.81213 0.00068412 0.5688 0.00047915 1.3809 0.0011633 842.378087921455 846.384737016544 56.258 0.67914 56.258 55.89 56.569 0 181 55 6 0 0 0 0.00030949 1 24187 47.548 34.129 4 0.85822 1.0294 0 14748000 8329100 6418400 2231 950 1172 1297 3589 3589 1647 GSDDAPYSPTAR 12 0 1 Phospho (STY) _GSDDAPYS(ph)PTAR_ GSDDAPY(0.008)S(0.803)PT(0.19)AR GS(-62.27)DDAPY(-20.28)S(6.26)PT(-6.26)AR 0 0 1 0 O75151;Q8N359;B4DH04;E7ET14;A0A087WW48;Q6P2C5 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 658.7622 2 658.761364 1315.50818 77166.51 0.89829 0.00059176 0.28752 0.00018941 1.1858 0.00078117 658.761385491673 663.766309622466 45.556 0.83398 45.556 45.077 45.911 0 173 59 5 0 0 0 0.0024297 1 17021 71.558 67.219 4 0.74246 0.80579 0 3650400 2095400 1555000 2232 934 1173 1298 3590 3590 1598;1599 GSDDAPYSPTAR 12 0 1 Phospho (STY) _GSDDAPYS(ph)PTAR_ GSDDAPYS(0.807)PT(0.192)AR GS(-70.81)DDAPY(-35.83)S(6.23)PT(-6.23)AR 0 0 1 0 O75151;Q8N359;B4DH04;E7ET14;A0A087WW48;Q6P2C5 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 663.7657 2 658.761364 1315.50818 75482.4 1.1012 0.0007254 -0.11413 -7.5186E-05 0.98703 0.00065022 658.761276408183 663.765319504204 35.496 0.57388 35.496 35.242 35.816 -3.8147E-06 251 47 8 0 0 0 1.9381E-06 2 19781 99.011 92.569 4 1.6374 1.1891 0 26165000 10087000 16078000 2233 934 1173 1298 3591;3592 3591 1598;1599 GSDSEDGEFEIQAEDDAR 18 0 1 Phospho (STY) _GS(ph)DSEDGEFEIQAEDDAR_ GS(0.92)DS(0.08)EDGEFEIQAEDDAR GS(10.62)DS(-10.62)EDGEFEIQAEDDAR 0 0 1 0 Q8TDD1;H0YHZ9 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1025.8823 2 1025.38149 2048.74842 61301.83 0.35735 0.00036642 0.11136 0.00011419 0.46871 0.00048061 1025.88273030342 1030.38592510251 82.618 1.508 82.618 81.895 83.403 -7.6294E-06 588 139 5 0 0 0 9.0024E-117 5 44251 195.6 175.95 2 0.87796 1.1053 0 51149000 27418000 23731000 2234 1162 1174 1299 3593;3594;3595;3596;3597 3595 2243;2244 GSDSEDGEFEIQAEDDAR 18 0 1 Phospho (STY) _GS(ph)DSEDGEFEIQAEDDAR_ GS(0.5)DS(0.5)EDGEFEIQAEDDAR GS(0)DS(0)EDGEFEIQAEDDAR 0 0 1 0 Q8TDD1;H0YHZ9 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1025.8849 2 1025.38149 2048.74842 61140.19 0.41627 0.00042683 0.54933 0.00056328 0.9656 0.00099011 1025.88355534251 1030.3861977308 86.727 1.2965 86.727 86.048 87.345 0 634 121 8 0 0 0 4.9252E-06 1 55584 61.962 56.356 2 1.1303 0.76765 0 59906000 24124000 35782000 2235 1162 1174 1299 3598 3598 2243;2244 GSEHQAIVQHLEK 13 1 0 Unmodified _GSEHQAIVQHLEK_ 0 0 0 0 Q14690;B4DH82 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 495.2628 3 492.591557 1474.75284 85597.12 0.29442 0.00014503 -0.47201 -0.00023251 -0.17759 -8.748E-05 492.59118750671 495.262556741383 99.014 1.8319 99.014 97.811 99.643 0 702 153 8 0 0 0 6.6225E-08 3 56093 100.4 79.813 1 1.0428 1.2938 0 112560000 56624000 55935000 2236 1061 1175 1300 3599;3600;3601 3601 GSFSDTGLGDGK 12 1 0 Phospho (STY) _GS(ph)FSDTGLGDGK_ GS(0.954)FS(0.044)DT(0.002)GLGDGK GS(13.32)FS(-13.32)DT(-27.77)GLGDGK 0 0 1 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 614.7521 2 610.745183 1219.47581 80618.87 0.47429 0.00028967 -0.1361 -8.3125E-05 0.33819 0.00020654 610.745103946197 614.752036296696 58.949 0.92131 58.949 58.424 59.345 0 223 74 4 0 0 0 0.017692 1 26055 40.725 27.371 3 1.24 1.4709 0 9201100 3576900 5624100 2237 1248 1176 1301 3602 3602 2566;2567 GSFSDTGLGDGK 12 1 0 Phospho (STY) _GSFS(ph)DTGLGDGK_ GSFS(0.999)DT(0.001)GLGDGK GS(-38.1)FS(31.83)DT(-31.83)GLGDGK 0 0 1 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 610.7451 2 610.745183 1219.47581 78997.15 0.57743 0.00035266 0.18658 0.00011395 0.76401 0.00046662 610.745300204851 614.752404664185 63.594 1.4776 63.594 62.924 64.402 3.8147E-06 511 114 6 0 0 0 1.0008E-20 3 30157 137.95 119.42 3 1.2473 1.5552 0 71189000 30093000 41095000 2238 1248 1176 1301 3603;3604;3605 3605 2566;2567 GSFSDTGLGDGK 12 1 0 Phospho (STY) _GSFS(ph)DTGLGDGK_ GS(0.001)FS(0.982)DT(0.017)GLGDGK GS(-32.45)FS(17.54)DT(-17.54)GLGDGK 0 0 1 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 610.7455 2 610.745183 1219.47581 76533.6 1.093 0.00066756 -0.17721 -0.00010823 0.91581 0.00055933 610.745027574603 614.752154333866 59.011 1.4398 59.011 58.267 59.707 0 616 135 7 0 0 0 5.9578E-06 2 36630 95.183 78.806 3 1.5042 0.98186 0 45170000 18095000 27075000 2239 1248 1176 1301 3606;3607 3606 2566;2567 GSGDISSDSIDHSPAK 16 1 0 Phospho (STY) _GSGDISSDSIDHS(ph)PAK_ GSGDISS(0.003)DS(0.008)IDHS(0.989)PAK GS(-62.32)GDIS(-36.6)S(-25.14)DS(-20.8)IDHS(20.8)PAK 0 0 1 0 Q5JSS2;H0Y306;Q9H5I1 Q5JSS2 Q5JSS2 SUV39H2 Histone-lysine N-methyltransferase SUV39H2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 830.8513 2 826.843614 1651.67267 68291.48 0.60031 0.00049636 0.82382 0.00068117 1.4241 0.0011775 826.843672832265 830.850999030584 51.201 0.80439 51.201 50.796 51.601 3.8147E-06 285 66 6 0 0 0 7.1666E-05 1 20987 65.943 52.824 5 1.7515 2.0932 0 13398000 4325200 9072400 2240 845 1177 1302 3608 3608 1451;1452;1453;1454 GSGDISSDSIDHSPAK 16 1 0 Phospho (STY) _GSGDISSDSIDHS(ph)PAK_ GSGDISSDSIDHS(1)PAK GS(-93.12)GDIS(-64.5)S(-47.38)DS(-34.24)IDHS(34.24)PAK 0 0 1 0 Q5JSS2;H0Y306;Q9H5I1 Q5JSS2 Q5JSS2 SUV39H2 Histone-lysine N-methyltransferase SUV39H2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 826.845 2 826.843614 1651.67267 66123.48 0.92618 0.00076581 0.045665 3.7758E-05 0.97185 0.00080357 826.843675679651 830.850787392568 30.189 0.84261 30.189 29.843 30.685 1.9073E-06 355 60 9 0 0 0 6.108E-16 2 15617 103.67 90.342 5 2.6807 1.7924 0 131310000 36488000 94827000 2241 845 1177 1302 3609;3610 3610 1451;1452;1453;1454 GSGDISSDSIDHSPAK 16 1 0 2 Phospho (STY) _GSGDIS(ph)SDSIDHS(ph)PAK_ GS(0.017)GDIS(0.536)S(0.189)DS(0.34)IDHS(0.918)PAK GS(-14.9)GDIS(2.22)S(-5.02)DS(-2.22)IDHS(10.66)PAK 0 0 2 0 Q5JSS2;H0Y306;Q9H5I1 Q5JSS2 Q5JSS2 SUV39H2 Histone-lysine N-methyltransferase SUV39H2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 871.3372 2 866.826779 1731.639 65565.3 0.96882 0.0008398 0.07464 6.47E-05 1.0435 0.0009045 866.82704515779 870.833896360468 39.066 0.82799 39.066 38.822 39.65 0 426 70 8 0 0 0 0.00069834 1 22434 42.309 32.305 10 1.8049 1.1724 0 33364000 11451000 21913000 2242 845 1177 1303 3611 3611 1451;1452;1453;1454 GSGDISSDSIDHSPAKK 17 2 0 Phospho (STY) _GSGDISS(ph)DSIDHSPAKK_ GSGDIS(0.071)S(0.351)DS(0.351)IDHS(0.227)PAKK GS(-42.76)GDIS(-6.92)S(0)DS(0)IDHS(-1.89)PAKK 0 0 1 1 Q5JSS2;H0Y306;Q9H5I1 Q5JSS2 Q5JSS2 SUV39H2 Histone-lysine N-methyltransferase SUV39H2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 599.6062 3 594.263156 1779.76764 78558.9 0.61972 0.00036828 0.064975 3.8612E-05 0.68469 0.00040689 594.263376679345 599.605999280745 21.49 0.60755 21.49 21.238 21.846 0 122 26 8 0 0 0 0.00011373 1 8312 43.598 30.75 5 2.6893 2.0046 0 130590000 38049000 92539000 2243 845 1178 1304 3612 3612 1451;1452;1453;1454 GSGTASDDEFENLR 14 0 1 Phospho (STY) _GSGTAS(ph)DDEFENLR_ GS(0.001)GT(0.006)AS(0.993)DDEFENLR GS(-29.35)GT(-22.37)AS(22.37)DDEFENLR 0 0 1 0 Q5H924;A0A024R9Y3;A0A024R9U8;A0A024R9W5;Q7Z6Z7 Q5H924 Q5H924 HUWE1 E3 ubiquitin-protein ligase HUWE1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 789.3106 2 789.309407 1576.60426 70736.3 0.93248 0.00073602 -0.026257 -2.0725E-05 0.90622 0.00071529 789.309490299594 794.313413693514 77.024 0.67243 77.024 76.704 77.377 0 171 57 5 0 0 0 1.9523E-05 1 39941 81.619 70.145 3 0.69004 0.84881 0 25161000 11672000 13488000 2244 174 1179 1305 3613 3613 274 GSISSTSEVHSPPNVGLR 18 0 1 Phospho (STY) _GSISSTSEVHS(ph)PPNVGLR_ GSISSTSEVHS(1)PPNVGLR GS(-90.28)IS(-68.84)S(-53.71)T(-48.52)S(-43.19)EVHS(43.19)PPNVGLR 0 0 1 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 638.6383 3 635.301833 1902.88367 74791.62 0.84559 0.0005372 -0.27337 -0.00017368 0.57222 0.00036353 635.301851526176 638.637794155523 80.887 2.4662 80.887 79.769 82.235 0 1863 226 11 0 0 0 3.4118E-18 8 42822 108.37 88.118 6 0.89879 1.1387 0 684380000 374120000 310260000 2245 1167 1180 1306 3614;3615;3616;3617;3618;3619;3620;3621 3618 2266;2267 GSISSTSEVHSPPNVGLR 18 0 1 Phospho (STY) _GSISSTSEVHS(ph)PPNVGLR_ GSIS(0.003)S(0.066)T(0.066)S(0.037)EVHS(0.828)PPNVGLR GS(-45.16)IS(-24.9)S(-10.99)T(-10.99)S(-13.5)EVHS(10.99)PPNVGLR 0 0 1 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 952.4509 2 952.449111 1902.88367 62095.06 0.7728 0.00073605 -0.12876 -0.00012264 0.64404 0.00061341 952.448881318297 957.453163175533 80.806 1.9813 80.806 79.903 81.884 0 1215 181 9 0 0 0 1.0944E-23 6 42394 116.51 116.51 6 0.9015 1.1401 0 243710000 126000000 117720000 2246 1167 1180 1306 3622;3623;3624;3625;3626;3627 3623 2266;2267 GSISSTSEVHSPPNVGLR 18 0 1 2 Phospho (STY) _GS(ph)ISSTSEVHS(ph)PPNVGLR_ GS(0.976)IS(0.023)S(0.001)T(0.001)S(0.01)EVHS(0.989)PPNVGLR GS(16.24)IS(-16.24)S(-32.85)T(-30.12)S(-20.09)EVHS(20.09)PPNVGLR 0 0 2 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 661.9578 3 661.957277 1982.85 74133.3 0.9144 0.00060529 -0.050772 -3.3609E-05 0.86363 0.00057169 661.957147133012 665.293596356376 82.415 1.021 82.415 81.884 82.905 7.6294E-06 414 98 7 0 0 0 1.1648E-10 3 44209 84.68 78.104 15 0.49837 0.62796 0 57494000 38409000 19084000 2247 1167 1180 1307 3628;3629;3630 3630 2266;2267 GSLDESSLGFGYPK 14 1 0 Phospho (STY) _GS(ph)LDESSLGFGYPK_ GS(1)LDESSLGFGYPK GS(49.15)LDES(-49.15)S(-61.67)LGFGY(-88.97)PK 0 0 1 0 Q2KJU5;Q2KJU6;Q2KJU3;A0A024QZ59;A0A024QZ19;Q9BUZ4 Q2KJU5 Q2KJU5 TRAF4 TNF receptor-associated factor 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 772.8423 2 768.834529 1535.6545 71185.75 0.8 0.00061507 -0.0010943 -8.4133E-07 0.79891 0.00061423 768.834106120574 772.841851326899 106.57 0.69049 106.57 106.19 106.88 7.6294E-06 197 49 6 0 0 0 4.4247E-08 3 61937 95.631 84.587 4 1.5997 1.9344 0 17062000 6365800 10696000 2248 5 1181 1308 3631;3632;3633 3632 2 GSLGSQGAKDEPEEELQK 18 2 0 Phospho (STY) _GSLGS(ph)QGAKDEPEEELQK_ GS(0.153)LGS(0.847)QGAKDEPEEELQK GS(-7.44)LGS(7.44)QGAKDEPEEELQK 0 0 1 1 J3KQ96;E7ETY2;Q13428;B4DRA2;Q9UFD4 J3KQ96 J3KQ96 TCOF1;DKFZp434G1035 Treacle protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 991.9424 2 991.441149 1980.86775 60503.15 0.53396 0.00052939 -0.58358 -0.00057858 -0.049618 -4.9194E-05 991.440728238457 999.454199343749 63.596 0.67824 63.596 63.36 64.038 0 171 52 5 0 0 0 1.0633E-10 1 29950 86.455 86.455 2 0.33049 0.40097 0 30546000 20066000 10481000 2249 792 1182 1309 3634 3634 1345;1346 GSLGSQGAKDEPEEELQK 18 2 0 Phospho (STY) _GSLGS(ph)QGAKDEPEEELQK_ GSLGS(1)QGAKDEPEEELQK GS(-63.01)LGS(63.01)QGAKDEPEEELQK 0 0 1 1 J3KQ96;E7ETY2;Q13428;B4DRA2;Q9UFD4 J3KQ96 J3KQ96 TCOF1;DKFZp434G1035 Treacle protein ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 661.2949 3 661.296525 1980.86775 NaN NaN NaN -2.0642 -0.001365 NaN NaN NaN NaN 63.529 1.201 63.529 62.851 64.052 0 0 0 0 1.2074E-31 1 30048 121.33 86.196 2 NaN NaN 0 42145000 42145000 0 2250 792 1182 1309 3635 3635 1345;1346 GSLSLSPPLNK 11 1 0 Phospho (STY) _GSLSLS(ph)PPLNK_ GS(0.012)LS(0.234)LS(0.754)PPLNK GS(-18.04)LS(-5.09)LS(5.09)PPLNK 0 0 1 0 A0A024QYT8;A8K889;A0A024QYV3;Q9H7X7 A0A024QYT8 A0A024QYT8 RABL5;IFT22 Intraflagellar transport protein 22 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 596.8023 2 596.802304 1191.59005 79435.52 1.1516 0.00068725 -0.79392 -0.00047381 0.35764 0.00021344 597.303101731179 601.310068434009 97.098 0.71754 97.098 96.637 97.355 0 230 59 6 0 0 0 0.02039 1 54877 41.339 15.234 3 0.82333 1.0445 0 37498000 19935000 17563000 2251 3 1183 1310 3636 3636 0 GSLTLTISGESPK 13 1 0 2 Phospho (STY) _GS(ph)LTLTISGES(ph)PK_ GS(0.913)LT(0.087)LT(0.007)IS(0.407)GES(0.586)PK GS(10.11)LT(-10.11)LT(-19.1)IS(-1.56)GES(1.56)PK 0 0 2 0 J3KPS2;Q6ZRV2 J3KPS2 J3KPS2 FAM83H Protein FAM83H ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 725.318 2 725.31733 1448.62011 NaN NaN NaN -0.085862 -6.2277E-05 NaN NaN NaN NaN 101.41 0.21759 101.41 101.35 101.57 -7.6294E-06 0 0 0 0.0010294 2 58289 55.546 38.604 10 NaN NaN 0 3222900 3222900 0 2252 890 1184 1311 3637;3638 3637 1506;1507;1508 GSLTLTISGESPK 13 1 0 2 Phospho (STY) _GS(ph)LTLTISGES(ph)PK_ GS(0.958)LT(0.042)LT(0.001)IS(0.306)GES(0.693)PK GS(13.5)LT(-13.5)LT(-29.66)IS(-3.55)GES(3.55)PK 0 0 2 0 J3KPS2;Q6ZRV2 J3KPS2 J3KPS2 FAM83H Protein FAM83H ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 725.3186 2 725.31733 1448.62011 NaN NaN NaN -0.96141 -0.00069733 NaN NaN NaN NaN 101.73 0.25642 101.73 101.57 101.82 0 0 0 0 0.00075205 1 58520 66.673 45.614 10 NaN NaN 0 3544000 3544000 0 2253 890 1184 1311 3639 3639 1506;1507;1508 GSLTLTISGESPK 13 1 0 Phospho (STY) _GSLTLTIS(ph)GESPK_ GSLTLT(0.046)IS(0.546)GES(0.407)PK GS(-31.66)LT(-31.58)LT(-10.77)IS(1.27)GES(-1.27)PK 0 0 1 0 J3KPS2;Q6ZRV2 J3KPS2 J3KPS2 FAM83H Protein FAM83H MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 689.3429 2 685.334165 1368.65378 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.74 1 96.74 96.24 97.24 0 0 0 0 0.0038525 1 54604 44.457 27.021 5 2254 890 1184 1312 3640 3640 1506;1507;1508 GSLTLTISGESPK 13 1 0 Phospho (STY) _GSLTLTISGES(ph)PK_ GSLTLT(0.001)IS(0.495)GES(0.504)PK GS(-59.45)LT(-51.38)LT(-29.25)IS(-0.08)GES(0.08)PK 0 0 1 0 J3KPS2;Q6ZRV2 J3KPS2 J3KPS2 FAM83H Protein FAM83H MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 685.3651 2 685.334165 1368.65378 75824.31 1.1484 0.00078702 -0.17831 -0.0001222 0.97006 0.00066481 685.33469145307 689.34117038915 96.459 0.50261 96.459 96.041 96.544 0 98 42 4 0 0 0 0.018645 1 54228 68.044 56.825 5 1.5668 1.9535 0 25783000 11737000 14046000 2255 890 1184 1312 3641 3641 1506;1507;1508 GSPDGSLQTGKPSAPK 16 2 0 Phospho (STY) _GS(ph)PDGSLQTGKPSAPK_ GS(0.917)PDGS(0.083)LQTGKPSAPK GS(10.46)PDGS(-10.46)LQT(-33.2)GKPS(-40.93)APK 0 0 1 1 E7EV54;B4DEX7;O15451;A8K548;C9JFV4;B4DR36;Q8IZL8 E7EV54 E7EV54 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 811.8923 2 803.877259 1605.73997 68366.25 0.74747 0.00060087 -0.48445 -0.00038944 0.26302 0.00021143 803.877312412445 811.890725516036 49.713 1.3329 49.713 49.027 50.36 0 562 112 8 0 0 0 0.00034626 1 19503 44.252 36.707 4 1.2116 1.5151 0 42875000 20069000 22806000 2256 470 1185 1313 3642 3642 818 GSPDGSLQTGKPSAPK 16 2 0 Phospho (STY) _GS(ph)PDGSLQTGKPSAPK_ GS(0.989)PDGS(0.011)LQTGKPSAPK GS(19.72)PDGS(-19.72)LQT(-34.36)GKPS(-40.18)APK 0 0 1 1 E7EV54;B4DEX7;O15451;A8K548;C9JFV4;B4DR36;Q8IZL8 E7EV54 E7EV54 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 536.2537 3 536.253932 1605.73997 87632.55 0.46106 0.00024724 0.18939 0.00010156 0.65045 0.00034881 536.253855862043 541.597090549084 49.687 0.66368 49.687 49.219 49.882 0 180 56 6 0 0 0 0.00010914 1 19862 48.371 38.713 4 1.0631 1.1261 0 8661500 4104000 4557500 2257 470 1185 1313 3643 3643 818 GSPDGSLQTGKPSAPK 16 2 0 Phospho (STY) _GS(ph)PDGSLQTGKPSAPK_ GS(0.996)PDGS(0.004)LQTGKPSAPK GS(23.71)PDGS(-23.71)LQT(-52.82)GKPS(-60.24)APK 0 0 1 1 E7EV54;B4DEX7;O15451;A8K548;C9JFV4;B4DR36;Q8IZL8 E7EV54 E7EV54 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 811.8922 2 803.877259 1605.73997 67088.59 0.97743 0.00078574 0.20736 0.00016669 1.1848 0.00095243 803.877428735001 811.891454838204 27.165 0.49569 27.165 26.951 27.447 0 194 33 9 0 0 0 5.5065E-05 1 13115 66.022 59.14 4 0.79291 0.59135 0 125580000 67594000 57987000 2258 470 1185 1313 3644 3644 818 GSPETNHLIR 10 0 1 Phospho (STY) _GS(ph)PETNHLIR_ GS(0.998)PET(0.002)NHLIR GS(27.86)PET(-27.86)NHLIR 0 0 1 0 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 602.2794 2 602.279527 1202.5445 80415.8 0.77152 0.00046467 -0.35175 -0.00021185 0.41977 0.00025282 602.279154821633 607.283683137816 63.734 1.6764 63.734 62.263 63.939 0 412 137 7 0 0 0 0.0045989 2 29759 67.879 50.512 2 0.57327 0.7244 0 156210000 101290000 54921000 2259 799 1186 1314 3645;3646 3645 1372 GSPETNHLIR 10 0 1 Phospho (STY) _GS(ph)PETNHLIR_ GS(0.981)PET(0.019)NHLIR GS(17.15)PET(-17.15)NHLIR 0 0 1 0 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 405.1915 3 401.855443 1202.5445 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.136 1 63.136 62.636 63.636 0 0 0 0 0.012468 1 29664 42.001 23.689 2 2260 799 1186 1314 3647 3647 1372 GSPETNHLIR 10 0 1 Phospho (STY) _GS(ph)PETNHLIR_ GS(1)PETNHLIR GS(52.2)PET(-52.2)NHLIR 0 0 1 0 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 602.2802 2 602.279527 1202.5445 77443.59 1.0357 0.00062375 0.191 0.00011503 1.2267 0.00073879 602.279612395848 607.283689929648 32.98 1.2522 32.98 32.562 33.815 0 625 94 10 0 0 0 1.8468E-06 2 17789 116.84 90.323 2 1.928 1.2576 0 445590000 152380000 293220000 2261 799 1186 1314 3648;3649 3649 1372 GSPETNHLIR 10 0 1 Phospho (STY) _GS(ph)PETNHLIR_ GS(0.96)PET(0.04)NHLIR GS(13.82)PET(-13.82)NHLIR 0 0 1 0 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 401.8555 3 401.855443 1202.5445 93080.98 0.3364 0.00013519 -0.093248 -3.7472E-05 0.24316 9.7713E-05 401.855409826432 405.191490886884 32.968 0.76923 32.968 32.669 33.438 0 375 60 9 0 0 0 0.00097146 1 17810 72.496 54.184 2 1.9406 1.2995 0 120730000 42643000 78083000 2262 799 1186 1314 3650 3650 1372 GSPGGPEFLK 10 1 0 Phospho (STY) _GS(ph)PGGPEFLK_ GS(1)PGGPEFLK GS(102.53)PGGPEFLK 0 0 1 0 Q4VC44;B3KRZ0;I3L188 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 534.7422 2 534.741715 1067.46888 83348.52 0.64346 0.00034408 0.038183 2.0418E-05 0.68164 0.0003645 534.741688058484 538.748725465796 80.521 2.0894 80.521 79.563 81.653 0 967 193 7 0 0 0 2.5807E-06 5 42643 102.53 47.937 1 0.99775 1.2341 0 302500000 143540000 158960000 2263 1086 1187 1315 3651;3652;3653;3654;3655 3654 2048 GSPGGPEFLK 10 1 0 Phospho (STY) _GS(ph)PGGPEFLK_ GS(1)PGGPEFLK GS(60.49)PGGPEFLK 0 0 1 0 Q4VC44;B3KRZ0;I3L188 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 534.7421 2 534.741715 1067.46888 82168.19 1.0586 0.00056608 -0.35351 -0.00018904 0.70509 0.00037704 534.741497052343 538.748524038786 78.747 3.2008 78.747 77.454 80.655 0 1619 303 8 0 0 0 0.0077275 6 50035 60.49 26.878 1 1.2254 0.81878 0 202360000 92670000 109690000 2264 1086 1187 1315 3656;3657;3658;3659;3660;3661 3656 2048 GSPHYFSPFRPY 12 0 1 Phospho (STY) _GS(ph)PHYFSPFRPY_ GS(0.983)PHY(0.011)FS(0.006)PFRPY GS(19.45)PHY(-19.45)FS(-22.45)PFRPY(-47.77) 0 0 1 1 A8K3M9;Q13242 A8K3M9 A8K3M9 SRSF9 Serine/arginine-rich splicing factor 9 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 515.8925 3 512.222015 1533.64421 85655.23 0.241 0.00012345 0.1678 8.5952E-05 0.40881 0.0002094 512.222174013957 515.558164555712 114.26 1.4265 114.26 113.7 115.12 0 379 126 5 0 0 0 0.0039246 1 68258 47.774 45.124 4 2.2664 2.7886 0 23847000 7858400 15988000 2265 454 1188 1316 3662 3662 788;789 GSPHYFSPFRPY 12 0 1 Phospho (STY) _GS(ph)PHYFSPFRPY_ GS(1)PHYFSPFRPY GS(38.15)PHY(-38.15)FS(-40.67)PFRPY(-54.09) 0 0 1 1 A8K3M9;Q13242 A8K3M9 A8K3M9 SRSF9 Serine/arginine-rich splicing factor 9 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 515.5585 3 512.222015 1533.64421 84830.77 0.82922 0.00042474 -0.17662 -9.0468E-05 0.6526 0.00033427 512.221869543655 515.558000634784 110.99 1.4926 110.99 110.33 111.82 0 499 143 5 0 0 0 0.003161 2 71500 54.09 48.811 4 1.115 0.87999 0 13850000 7522400 6327700 2266 454 1188 1316 3663;3664 3664 788;789 GSPHYFSPFRPY 12 0 1 Phospho (STY) _GS(ph)PHYFSPFRPY_ GS(1)PHYFSPFRPY GS(58.04)PHY(-58.04)FS(-65.43)PFRPY(-75.48) 0 0 1 1 A8K3M9;Q13242 A8K3M9 A8K3M9 SRSF9 Serine/arginine-rich splicing factor 9 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 768.3317 2 767.829384 1533.64421 NaN NaN NaN -0.038201 -2.9331E-05 NaN NaN NaN NaN 111 1.3263 111 110.28 111.61 0 0 0 0 0.0035905 1 71626 75.479 63.118 4 NaN NaN 0 7081000 7081000 0 2267 454 1188 1316 3665 3665 788;789 GSPHYFSPFRPY 12 0 1 Phospho (STY) _GS(ph)PHYFSPFRPY_ GS(1)PHYFSPFRPY GS(37.26)PHY(-37.26)FS(-56.07)PFRPY(-62.92) 0 0 1 1 A8K3M9;Q13242 A8K3M9 A8K3M9 SRSF9 Serine/arginine-rich splicing factor 9 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 772.8344 2 767.829384 1533.64421 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.19 1 111.19 110.69 111.69 0 0 0 0 0.00026242 1 71533 62.924 46.7 4 2268 454 1188 1316 3666 3666 788;789 GSPHYFSPFRPY 12 0 1 2 Phospho (STY) _GS(ph)PHYFS(ph)PFRPY_ GS(1)PHYFS(1)PFRPY GS(77.22)PHY(-44.25)FS(44.25)PFRPY(-54.68) 0 0 2 1 A8K3M9;Q13242 A8K3M9 A8K3M9 SRSF9 Serine/arginine-rich splicing factor 9 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 807.8132 2 807.812549 1613.61055 67429.38 0.95972 0.00077528 0.038157 3.0824E-05 0.99788 0.0008061 807.812561204583 812.816657632353 117.99 1.2695 117.99 117.5 118.77 7.6294E-06 788 110 10 0 0 0 9.6838E-20 4 71012 129.77 126.01 6 1.5445 1.9514 0 146530000 58480000 88047000 2269 454 1188 1317 3667;3668;3669;3670 3669 788;789 GSPHYFSPFRPY 12 0 1 2 Phospho (STY) _GS(ph)PHYFS(ph)PFRPY_ GS(0.999)PHY(0.004)FS(0.997)PFRPY GS(30.36)PHY(-25.7)FS(25.7)PFRPY(-45.97) 0 0 2 1 A8K3M9;Q13242 A8K3M9 A8K3M9 SRSF9 Serine/arginine-rich splicing factor 9 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 542.2139 3 538.877458 1613.61055 83024.2 0.68705 0.00037024 -0.15568 -8.389E-05 0.53137 0.00028635 538.877340528549 542.213414223595 118.03 1.1554 118.03 117.53 118.68 7.6294E-06 620 100 8 0 0 0 0.0028574 1 71013 62.861 62.861 6 1.6135 2.0368 0 87823000 32579000 55244000 2270 454 1188 1317 3671 3671 788;789 GSPHYFSPFRPY 12 0 1 2 Phospho (STY) _GS(ph)PHYFS(ph)PFRPY_ GS(1)PHYFS(1)PFRPY GS(37.07)PHY(-36)FS(36)PFRPY(-36.55) 0 0 2 1 A8K3M9;Q13242 A8K3M9 A8K3M9 SRSF9 Serine/arginine-rich splicing factor 9 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 813.3186 2 807.812549 1613.61055 67183.93 1.1247 0.00090853 0.38101 0.00030779 1.5057 0.0012163 807.812829852238 812.816901600866 124.73 1.0503 124.73 124.37 125.42 0 682 100 10 0 0 0 0.0042071 1 80469 58.32 54.557 6 1.4167 0.94815 0 123820000 52347000 71474000 2271 454 1188 1317 3672 3672 788;789 GSPLASISK 9 1 0 Phospho (STY) _GS(ph)PLASISK_ GS(1)PLASISK GS(35.18)PLAS(-35.18)IS(-40.11)K 0 0 1 0 B2RWP5;Q96L73;Q96MN8;Q8NB95 B2RWP5 B2RWP5 NSD1 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 470.2318 2 470.230983 938.447413 NaN NaN NaN 0.40851 0.00019209 NaN NaN NaN NaN 66.37 0.97021 66.37 65.827 66.797 0 0 0 0 0.01056 1 32126 54.784 28.738 3 NaN NaN 0 18418000 18418000 0 2272 565 1189 1318 3673 3673 935 GSPLASISK 9 1 0 Phospho (STY) _GS(ph)PLASISK_ GS(0.997)PLAS(0.003)ISK GS(25.1)PLAS(-25.1)IS(-38.1)K 0 0 1 0 B2RWP5;Q96L73;Q96MN8;Q8NB95 B2RWP5 B2RWP5 NSD1 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 474.2383 2 470.230983 938.447413 89860.46 0.78786 0.00037048 -1.1233 -0.00052822 -0.33545 -0.00015774 470.229843825185 474.23775629373 58.653 1.4024 58.653 57.974 59.376 3.8147E-06 496 130 7 0 0 0 0.028594 1 35919 41.109 21.846 3 2.2004 1.4502 0 60145000 20434000 39711000 2273 565 1189 1318 3674 3674 935 GSPNTASAEATLPR 14 0 1 Phospho (STY) _GS(ph)PNTASAEATLPR_ GS(0.997)PNT(0.003)ASAEATLPR GS(24.95)PNT(-24.95)AS(-51.23)AEAT(-60.43)LPR 0 0 1 0 Q6PJG6 Q6PJG6 Q6PJG6 BRAT1 BRCA1-associated ATM activator 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 726.3292 2 726.329945 1450.64534 NaN NaN NaN -0.071161 -5.1686E-05 NaN NaN NaN NaN 65.31 0.86716 65.31 64.882 65.749 0 0 0 0 0.00039827 1 31162 63.29 45.426 4 NaN NaN 0 11843000 11843000 0 2274 1123 1190 1319 3675 3675 2139 GSPQAGVDLSFATR 14 0 1 Phospho (STY) _GS(ph)PQAGVDLSFATR_ GS(1)PQAGVDLSFATR GS(56.65)PQAGVDLS(-56.65)FAT(-56.65)R 0 0 1 0 Q13884 Q13884 Q13884 SNTB1 Beta-1-syntrophin ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 743.8474 2 743.340313 1484.66607 NaN NaN NaN 3.066 0.002279 NaN NaN NaN NaN 100.79 0.14861 100.79 100.67 100.82 0 0 0 0 0.00044065 1 57814 56.648 28.016 3 NaN NaN 0 5357400 5357400 0 2275 1054 1191 1320 3676 3676 1965 GSPQAGVDLSFATR 14 0 1 Phospho (STY) _GS(ph)PQAGVDLSFATR_ GS(1)PQAGVDLSFATR GS(73.04)PQAGVDLS(-73.04)FAT(-73.04)R 0 0 1 0 Q13884 Q13884 Q13884 SNTB1 Beta-1-syntrophin MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 748.3467 2 743.340313 1484.66607 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.39 1 100.39 99.891 100.89 0 0 0 0 4.3836E-06 1 57471 74.789 54.693 3 2276 1054 1191 1320 3677 3677 1965 GSPSVAASSPPAIPK 15 1 0 2 Phospho (STY) _GS(ph)PSVAAS(ph)SPPAIPK_ GS(0.984)PS(0.016)VAAS(0.639)S(0.361)PPAIPK GS(18)PS(-18)VAAS(2.48)S(-2.48)PPAIPK 0 0 2 0 H0YM74;Q92610 H0YM74 H0YM74 ZNF592 Zinc finger protein 592 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 763.3376 2 763.338597 1524.66264 69358.69 0.8465 0.00064616 0.24217 0.00018486 1.0887 0.00083102 763.338489982507 767.345681565397 81.971 1.1281 81.971 81.418 82.546 -7.6294E-06 636 106 9 0 0 0 3.6534E-13 4 44071 109.07 95.89 6 0.6709 0.83161 0 126640000 73608000 53027000 2277 863 1192 1321 3678;3679;3680;3681 3681 1469;1470 GSPSVAASSPPAIPK 15 1 0 2 Phospho (STY) _GS(ph)PSVAAS(ph)SPPAIPK_ GS(0.949)PS(0.051)VAAS(0.556)S(0.444)PPAIPK GS(12.8)PS(-12.8)VAAS(0.98)S(-0.98)PPAIPK 0 0 2 0 H0YM74;Q92610 H0YM74 H0YM74 ZNF592 Zinc finger protein 592 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 763.3383 2 763.338597 1524.66264 68684.52 1.2679 0.00096783 -0.25839 -0.00019724 1.0095 0.00077059 763.338435606354 767.345321802465 89.914 1.4287 89.914 89.298 90.727 7.6294E-06 733 135 8 0 0 0 3.286E-05 3 58200 77.324 70.638 6 1.6283 1.0773 0 67306000 24718000 42588000 2278 863 1192 1321 3682;3683;3684 3683 1469;1470 GSPTGGAQLLK 11 1 0 Phospho (STY) _GS(ph)PTGGAQLLK_ GS(0.998)PT(0.002)GGAQLLK GS(26.04)PT(-26.04)GGAQLLK 0 0 1 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 554.7735 2 554.773546 1107.53254 80916.93 0.42861 0.00023778 0.016709 9.2695E-06 0.44532 0.00024705 554.773550842126 558.780576577586 69.231 1.8594 69.231 68.331 70.19 0 963 182 8 0 0 0 7.565E-09 6 34539 113.22 81.803 2 1.0418 1.2881 0 355350000 174250000 181100000 2279 1060 1193 1322 3685;3686;3687;3688;3689;3690 3688 1987 GSPTGGAQLLK 11 1 0 Phospho (STY) _GS(ph)PTGGAQLLK_ GS(0.932)PT(0.068)GGAQLLK GS(11.35)PT(-11.35)GGAQLLK 0 0 1 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 554.7741 2 554.773546 1107.53254 80559.34 0.75483 0.00041876 -0.14464 -8.0241E-05 0.61019 0.00033852 554.773650576883 558.780550307169 63.185 2.702 63.185 62.328 65.03 0 1545 248 9 0 0 0 3.7227E-10 5 39930 119.55 90.823 2 1.9552 1.304 0 618800000 200970000 417830000 2280 1060 1193 1322 3691;3692;3693;3694;3695 3695 1987 GSPTPGFSTR 10 0 1 Phospho (STY) _GS(ph)PTPGFSTR_ GS(0.993)PT(0.007)PGFSTR GS(21.36)PT(-21.36)PGFS(-47.91)T(-47.91)R 0 0 1 0 J3KPS2;Q6ZRV2 J3KPS2 J3KPS2 FAM83H Protein FAM83H MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 543.7348 2 543.734421 1085.45429 83425.43 0.29531 0.00016057 0.16726 9.0944E-05 0.46257 0.00025151 543.734444465789 548.738580707884 52.05 1.3104 52.05 51.357 52.667 0 414 104 5 0 0 0 0.010776 1 21357 52.247 42.853 4 0.7047 0.84029 0 16196000 8985700 7210100 2281 890 1194 1323 3696 3696 1509 GSVHSVSFSPDGRK 14 1 1 Unmodified _GSVHSVSFSPDGRK_ 0 0 0 1 A0A0B4J2E5;Q15269 A0A0B4J2E5 A0A0B4J2E5 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 493.2558 3 487.24779 1458.72154 87980.44 0.55529 0.00027056 0.17047 8.3061E-05 0.72576 0.00035363 487.248045317446 493.255418653718 95.363 0.43169 95.363 95.236 95.667 0 100 39 4 0 0 0 0.0093778 1 53606 29.355 29.355 1 1.0198 1.1401 0 17117000 9424700 7692100 2282 313 1195 1324 3697 3697 GSVPLSSSPPATHFPDETEITNPVPK 26 1 0 Phospho (STY) _GSVPLSSSPPAT(ph)HFPDETEITNPVPK_ GSVPLS(0.158)S(0.095)S(0.347)PPAT(0.383)HFPDET(0.007)EIT(0.009)NPVPK GS(-36.89)VPLS(-3.84)S(-6.07)S(-0.43)PPAT(0.43)HFPDET(-17.15)EIT(-16.47)NPVPK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 931.7824 3 928.775778 2783.30551 62431.93 0.83323 0.00077388 -0.1694 -0.00015733 0.66383 0.00061655 929.110727729589 931.780757871905 112.22 2.9813 112.22 111.29 114.27 -7.6294E-06 2384 268 14 0 0 0 7.3874E-13 3 66291 55.158 55.158 7 0.77477 0.95185 0 6565400000 3713100000 2852300000 2283 962 1196 1325 3698;3699;3700 3699 1692;1693;2873 GSVPLSSSPPATHFPDETEITNPVPK 26 1 0 2 Phospho (STY) _GSVPLS(ph)S(ph)SPPATHFPDETEITNPVPK_ GS(0.197)VPLS(0.586)S(0.636)S(0.535)PPAT(0.044)HFPDET(0.002)EITNPVPK GS(-5.36)VPLS(0.32)S(1.59)S(-0.32)PPAT(-12.03)HFPDET(-27.78)EIT(-36.61)NPVPK 0 0 2 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 955.7665 3 955.431222 2863.27184 61547.58 0.62262 0.00059487 -0.066723 -6.375E-05 0.55589 0.00053112 955.765637906989 958.436647341355 115.54 1.4224 115.54 115.07 116.49 0 1200 123 13 0 0 0 1.7138E-12 2 69206 54.05 54.05 21 0.66958 0.82486 0 1893400000 1113700000 779690000 2284 962 1196 1326 3701;3702 3702 1692;1693;2873 GSVPLSSSPPATHFPDETEITNPVPK 26 1 0 Unmodified _GSVPLSSSPPATHFPDETEITNPVPK_ 0 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 902.4556 3 902.120335 2703.33918 64827.56 1.2642 0.0011404 -0.17852 -0.00016105 1.0857 0.0009794 902.454427085705 905.12582172918 110.13 0.62181 110.13 109.78 110.4 0 394 56 10 0 0 0 0.00035579 1 70800 30.749 30.749 1 1.4964 0.99396 0 28949000 13080000 15869000 2285 962 1196 1327 3703 3703 GSYGDLGGPIITTQVTIPK 19 1 0 Phospho (STY) _GS(ph)YGDLGGPIITTQVTIPK_ GS(0.999)Y(0.001)GDLGGPIITTQVTIPK GS(29.46)Y(-29.46)GDLGGPIIT(-53.01)T(-53.01)QVT(-53.01)IPK 0 0 1 0 Q5T6W2;B4DUQ1;B4DFF1;A0A024R228;Q5EC54;P61978;B3KU16;S4R359 Q5T6W2 Q5T6W2 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1003.0106 2 999.003188 1995.99182 NaN NaN NaN -0.13211 -0.00013198 NaN NaN NaN NaN 123.76 0.28706 123.76 123.55 123.84 0 0 0 0 2.7304E-07 1 74866 58.09 44.427 5 NaN NaN 0 3115100 0 3115100 2286 56 1197 1328 3704 3704 67 GSYVSIHSSGFR 12 0 1 Unmodified _GSYVSIHSSGFR_ 0 0 0 0 K7EPJ3;K7EQN7;A0A024R7H0;B4DX78;O00148;K7ENP6;A0A0G2JHN7;K7EL56;K7EIL8;F6U6E2;K7EN69;F6S2B7;F6SXL5;B4DH55;Q7KYK3;B4DF34;F6QYI9;A0A0G2JJL7;F6R6M7;F6S4E6;A0A0A0MT12;F6TRA5;F6WLT2;Q59G92;Q5STU3;A0A024RCM3;Q13838 K7EPJ3 K7EPJ3 DDX39A;DDX39;DDX39B;BAT1;hCG_2005638 ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 654.3267 2 648.820201 1295.62585 NaN NaN NaN 0.56069 0.00036379 NaN NaN NaN NaN 93.725 0.55044 93.725 93.545 94.095 0 0 0 0 0.021842 1 52371 43.308 23.004 1 NaN NaN 0 12300000 0 12300000 2287 134 1198 1329 3705 3705 GTDTQTPAVLSPSK 14 1 0 Phospho (STY) _GTDTQTPAVLS(ph)PSK_ GTDTQTPAVLS(0.68)PS(0.32)K GT(-132.11)DT(-87.98)QT(-57.4)PAVLS(3.27)PS(-3.27)K 0 0 1 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 745.3561 2 741.347803 1480.68105 69715.03 0.69023 0.0005117 -0.066046 -4.8963E-05 0.62418 0.00046274 741.347903592767 745.354803031346 66.019 1.8957 66.019 65.137 67.033 0 1058 140 11 0 0 0 4.2739E-89 5 31589 190.44 177.88 5 0.98954 1.2189 0 2000800000 1009100000 991740000 2288 995 1199 1330 3706;3707;3708;3709;3710 3706 1801 GTDTQTPAVLSPSK 14 1 0 Phospho (STY) _GTDTQTPAVLS(ph)PSK_ GT(0.001)DT(0.001)QT(0.179)PAVLS(0.638)PS(0.181)K GT(-27.11)DT(-27.94)QT(-5.53)PAVLS(5.47)PS(-5.47)K 0 0 1 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 745.3555 2 741.347803 1480.68105 NaN NaN NaN 0.3732 0.00027667 NaN NaN NaN NaN 68.882 0.13025 68.882 68.83 68.96 0 0 0 0 0.0004257 1 34213 71.531 54.32 5 NaN NaN 0 13119000 0 13119000 2289 995 1199 1330 3711 3711 1801 GTDTQTPAVLSPSK 14 1 0 Phospho (STY) _GTDTQTPAVLS(ph)PSK_ GTDTQT(0.036)PAVLS(0.829)PS(0.135)K GT(-38.82)DT(-32.25)QT(-13.67)PAVLS(7.9)PS(-7.9)K 0 0 1 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 741.3489 2 741.347803 1480.68105 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.5 1 64.5 64 65 0 0 0 0 0.0016351 1 30728 46.408 33.428 5 2290 995 1199 1330 3712 3712 1801 GTDTQTPAVLSPSK 14 1 0 Phospho (STY) _GTDTQTPAVLS(ph)PSK_ GTDTQT(0.002)PAVLS(0.841)PS(0.157)K GT(-60.54)DT(-47.12)QT(-27.09)PAVLS(7.28)PS(-7.28)K 0 0 1 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 741.3494 2 741.347803 1480.68105 70331.05 0.90474 0.00067072 0.21687 0.00016078 1.1216 0.0008315 741.348149623227 745.35464401138 37.394 1.8172 37.394 36.833 38.651 0 922 160 8 0 0 0 5.9321E-05 1 21140 79.804 70.696 5 1.3065 0.86956 0 95267000 39534000 55734000 2291 995 1199 1330 3713 3713 1801 GTDTQTPAVLSPSK 14 1 0 Phospho (STY) _GTDTQTPAVLS(ph)PSK_ GTDTQTPAVLS(0.795)PS(0.204)K GT(-69.32)DT(-51.47)QT(-40.33)PAVLS(5.9)PS(-5.9)K 0 0 1 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 741.3489 2 741.347803 1480.68105 69332.31 0.92602 0.0006865 -0.81854 -0.00060683 0.10748 7.9677E-05 741.34806961205 745.35444761365 61.851 5.4031 61.851 59.215 64.618 0 2754 502 12 0 0 0 9.4037E-12 6 38895 101.75 92.528 5 1.2868 0.85654 0 2006400000 867250000 1139200000 2292 995 1199 1330 3714;3715;3716;3717;3718;3719 3718 1801 GTEASSGTEAATGLEGEEK 19 1 0 2 Phospho (STY) _GTEAS(ph)S(ph)GTEAATGLEGEEK_ GT(0.382)EAS(0.685)S(0.672)GT(0.261)EAAT(0.001)GLEGEEK GT(-5.06)EAS(5.58)S(5.06)GT(-6.34)EAAT(-33.38)GLEGEEK 0 0 2 0 B4DKU3;Q8IY81 B4DKU3 B4DKU3 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 992.3771 2 992.37703 1982.73951 62232.92 0.50986 0.00050597 0.33862 0.00033604 0.84848 0.00084201 992.377280211771 996.384343333972 59.839 0.83707 59.839 59.416 60.253 -3.8147E-06 268 61 6 0 0 0 4.5382E-08 2 26860 65.092 57.413 10 0.54507 0.67565 0 24324000 16037000 8287100 2293 632 1200 1331 3720;3721 3721 1042;1043 GTEASSGTEAATGLEGEEK 19 1 0 Phospho (STY) _GTEAS(ph)SGTEAATGLEGEEK_ GTEAS(0.876)S(0.115)GT(0.009)EAATGLEGEEK GT(-45.15)EAS(8.8)S(-8.8)GT(-19.94)EAAT(-43.41)GLEGEEK 0 0 1 0 B4DKU3;Q8IY81 B4DKU3 B4DKU3 FTSJ3 pre-rRNA processing protein FTSJ3 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 956.4045 2 952.393865 1902.77318 NaN NaN NaN -0.0058406 -5.5625E-06 NaN NaN NaN NaN 55.368 0.90871 55.368 55.106 56.015 0 0 0 0 2.8816E-27 1 23564 107.03 83.42 5 NaN NaN 0 22989000 0 22989000 2294 632 1200 1332 3722 3722 1042;1043 GTEASSGTEAATGLEGEEK 19 1 0 Phospho (STY) _GTEAS(ph)SGTEAATGLEGEEK_ GT(0.008)EAS(0.464)S(0.464)GT(0.064)EAATGLEGEEK GT(-17.54)EAS(0)S(0)GT(-8.62)EAAT(-32.38)GLEGEEK 0 0 1 0 B4DKU3;Q8IY81 B4DKU3 B4DKU3 FTSJ3 pre-rRNA processing protein FTSJ3 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 952.395 2 952.393865 1902.77318 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.029 1 55.029 54.529 55.529 0 0 0 0 0.00031836 1 23445 59.185 44.765 5 2295 632 1200 1332 3723 3723 1042;1043 GTEASSGTEAATGLEGEEK 19 1 0 Phospho (STY) _GTEASS(ph)GTEAATGLEGEEK_ GTEAS(0.175)S(0.784)GT(0.04)EAATGLEGEEK GT(-32.72)EAS(-6.5)S(6.5)GT(-12.9)EAAT(-37.26)GLEGEEK 0 0 1 0 B4DKU3;Q8IY81 B4DKU3 B4DKU3 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 956.4014 2 952.393865 1902.77318 62100.68 0.98341 0.0009366 0.20634 0.00019652 1.1898 0.0011331 952.394094432142 956.40143433466 51.463 1.2054 51.463 50.888 52.093 3.8147E-06 614 107 8 0 0 0 2.9598E-13 1 31137 82.877 77.56 5 0.63211 0.41648 0 59688000 36227000 23461000 2296 632 1200 1332 3724 3724 1042;1043 GTEPSPGGTPQPSRPVSPAGPPEGVPEEAQPPR 33 0 2 Phospho (STY) _GTEPSPGGTPQPSRPVS(ph)PAGPPEGVPEEAQPPR_ GTEPS(0.002)PGGT(0.061)PQPS(0.228)RPVS(0.709)PAGPPEGVPEEAQPPR GT(-32.01)EPS(-25.77)PGGT(-10.68)PQPS(-4.93)RPVS(4.93)PAGPPEGVPEEAQPPR 0 0 1 1 I3L1Q2;Q8WUZ0 I3L1Q2 I3L1Q2 BCL7C B-cell CLL/lymphoma 7 protein family member C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1114.5275 3 1113.85956 3338.55686 58793.31 0.080937 9.0153E-05 0.19115 0.00021291 0.27208 0.00030306 1114.1938681279 1120.8659458072 83.431 0.88665 83.431 82.954 83.84 0 513 81 9 0 0 0 8.4969E-13 1 44890 51.774 43.37 5 0.59774 0.74295 0 69305000 41180000 28125000 2297 885 1201 1333 3725 3725 1497 GTEPSTDGETSEAESNYSVSEHHDTILR 28 0 1 Phospho (STY) _GTEPS(ph)TDGETSEAESNYSVSEHHDTILR_ GT(0.011)EPS(0.245)T(0.245)DGET(0.245)S(0.245)EAES(0.005)NY(0.002)S(0.001)VSEHHDTILR GT(-13.59)EPS(0)T(0)DGET(0)S(0)EAES(-17.34)NY(-21.35)S(-24.53)VS(-32.41)EHHDT(-38.85)ILR 0 0 1 0 Q5QJE6;J3KP30;B7Z854;E9PRB3 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 783.3323 4 782.829562 3127.28914 NaN NaN NaN -0.012612 -9.8727E-06 NaN NaN NaN NaN 87.21 0.79498 87.21 86.92 87.715 7.6294E-06 0 0 0 9.9378E-06 2 47514 44.648 38.167 10 NaN NaN 0 31923000 31923000 0 2298 1097 1202 1334 3726;3727 3726 2067;2068;2939;2940 GTEPSTDGETSEAESNYSVSEHHDTILR 28 0 1 Unmodified _GTEPSTDGETSEAESNYSVSEHHDTILR_ 0 0 0 0 Q5QJE6;J3KP30;B7Z854;E9PRB3 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 765.5939 4 762.837979 3047.32281 NaN NaN NaN 1.1487 0.0008763 NaN NaN NaN NaN 94.28 0.20721 94.28 94.151 94.358 0 0 0 0 0.0010107 1 52764 31.37 16.666 1 NaN NaN 0 7483700 0 7483700 2299 1097 1202 1335 3728 3728 GTEPSTDGETSEAESNYSVSEHHDTILR 28 0 1 Unmodified _GTEPSTDGETSEAESNYSVSEHHDTILR_ 0 0 0 0 Q5QJE6;J3KP30;B7Z854;E9PRB3 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 765.5902 4 762.837979 3047.32281 NaN NaN NaN 0.064174 4.8954E-05 NaN NaN NaN NaN 95.276 0.33052 95.276 95.058 95.388 7.6294E-06 0 0 0 2.3924E-05 1 53350 40.819 30.836 1 NaN NaN 0 17031000 0 17031000 2300 1097 1202 1335 3729 3729 GTEPSTDGETSEAESNYSVSEHHDTILR 28 0 1 Unmodified _GTEPSTDGETSEAESNYSVSEHHDTILR_ 0 0 0 0 Q5QJE6;J3KP30;B7Z854;E9PRB3 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 763.0891 4 762.837979 3047.32281 68265.78 1.1289 0.00086116 -0.13634 -0.00010401 0.99255 0.00075716 763.08848969282 765.590644404665 68.381 2.1223 68.381 67.352 69.475 0 1186 186 10 0 0 0 2.5682E-27 3 42880 83.216 83.216 1 1.4592 0.99889 0 49251000 18554000 30697000 2301 1097 1202 1335 3730;3731;3732 3731 GTGASGSFK 9 1 0 Unmodified _GTGASGSFK_ 0 0 0 0 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402;A1L407;P22492;Q02539;P16401;P16403 Q4VB24;P16401;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1T;HIST1H1A;HIST1H1B;HIST1H1C Histone H1.4;Histone H1.3;Histone H1t;Histone H1.1;Histone H1.5;Histone H1.2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 410.2081 2 406.200867 810.387182 96011.94 -0.090705 -3.6845E-05 0.21626 8.7845E-05 0.12555 5.1E-05 406.20089274949 410.207893926627 43.092 1.1124 43.092 42.448 43.561 -3.8147E-06 293 78 5 0 0 0 0.026131 1 15536 60.91 30.242 1 0.85069 1.0088 0 8109700 4587800 3521900 2302 410;967;966 1203 1336 3733 3733 GTGQSDDSDIWDDTALIK 18 1 0 Phospho (STY) _GT(ph)GQSDDSDIWDDTALIK_ GT(0.466)GQS(0.466)DDS(0.068)DIWDDTALIK GT(0)GQS(0)DDS(-8.33)DIWDDT(-36.7)ALIK 0 0 1 0 B4DP61;E7EQZ4;Q16637 B4DP61 B4DP61 SMN2;SMN1 Survival motor neuron protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1008.9258 2 1008.92533 2015.83611 61899.72 0.23976 0.0002419 0.15972 0.00016114 0.39948 0.00040304 1008.92577095206 1013.43423051133 120.14 0.65875 120.14 119.78 120.44 0 303 61 6 0 0 0 0.0014275 1 72159 44.616 35.662 4 0.75867 0.93953 0 24091000 11551000 12540000 2303 649 1204 1337 3734 3734 1080;2790 GTGSADSIATLPK 13 1 0 Phospho (STY) _GTGS(ph)ADSIATLPK_ GTGS(1)ADSIATLPK GT(-36.41)GS(36.41)ADS(-70.06)IAT(-99.75)LPK 0 0 1 0 B5MDQ0;Q2NKX8 B5MDQ0 B5MDQ0 ERCC6L DNA excision repair protein ERCC-6-like MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 653.313 2 649.305407 1296.59626 76327.46 0.96454 0.00062628 -0.23876 -0.00015503 0.72578 0.00047126 649.305063731309 653.312329366346 80.956 1.2201 80.956 80.291 81.512 0 339 113 4 0 0 0 5.9139E-26 2 43021 143.94 124.96 4 1.2118 1.5381 0 40011000 18782000 21229000 2304 697 1205 1338 3735;3736 3736 1148 GTGSADSIATLPK 13 1 0 Phospho (STY) _GTGS(ph)ADSIATLPK_ GT(0.002)GS(0.998)ADSIATLPK GT(-26.41)GS(26.41)ADS(-45.93)IAT(-60.94)LPK 0 0 1 0 B5MDQ0;Q2NKX8 B5MDQ0 B5MDQ0 ERCC6L DNA excision repair protein ERCC-6-like MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 653.3129 2 649.305407 1296.59626 75835.2 1.1294 0.00073332 -0.13804 -8.9629E-05 0.99135 0.00064369 649.305365014134 653.312365305932 82.391 0.88878 82.391 82.025 82.914 0 382 80 7 0 0 0 4.4459E-10 2 52705 106.29 85.459 4 1.9253 1.2747 0 68614000 21766000 46847000 2305 697 1205 1338 3737;3738 3738 1148 GTHQLYSTSHDR 12 0 1 Unmodified _GTHQLYSTSHDR_ 0 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 351.1678 4 351.168099 1400.64329 104358.2 -0.045067 -1.5826E-05 -0.055824 -1.9604E-05 -0.10089 -3.543E-05 351.168098238585 353.670107145073 80.958 0.68595 80.958 80.695 81.381 0 183 62 5 0 0 0 0.012103 1 42983 31.708 20.495 1 0.85139 1.0451 0 22842000 13244000 9598700 2306 928 1206 1339 3739 3739 GTHQLYSTSHDR 12 0 1 Unmodified _GTHQLYSTSHDR_ 0 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 467.8881 3 467.888373 1400.64329 88651.85 0.33956 0.00015888 -0.02999 -1.4032E-05 0.30957 0.00014484 467.888318657921 471.558686416238 81 1.7392 81 80.271 82.01 0 621 160 7 0 0 0 0.0046978 1 43382 45.207 34.301 1 0.66197 0.83632 0 139230000 98973000 40262000 2307 928 1206 1339 3740 3740 GTIEILSDVQLIK 13 1 0 Unmodified _GTIEILSDVQLIK_ 0 0 0 0 F8VPE8;F8VW21;F8VU65;Q53HW2;Q53HK9;A8K4Z4;A0A024RBS2;Q8NHW5;P05388;B4E3D5 F8VPE8 F8VPE8 RPLP0;RPLP0P6 60S acidic ribosomal protein P0-like;60S acidic ribosomal protein P0 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 719.4282 2 714.919049 1427.82355 NaN NaN NaN 0.021544 1.5402E-05 NaN NaN NaN NaN 128.81 0.35861 128.81 128.53 128.89 0 0 0 0 0.0014914 1 78254 73.067 46.394 1 NaN NaN 0 2504600 0 2504600 2308 203 1207 1340 3741 3741 GTIEILSDVQLIK 13 1 0 Unmodified _GTIEILSDVQLIK_ 0 0 0 0 F8VPE8;F8VW21;F8VU65;Q53HW2;Q53HK9;A8K4Z4;A0A024RBS2;Q8NHW5;P05388;B4E3D5 F8VPE8 F8VPE8 RPLP0;RPLP0P6 60S acidic ribosomal protein P0-like;60S acidic ribosomal protein P0 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 714.9183 2 714.919049 1427.82355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.44 1 128.44 127.94 128.94 1.5259E-05 0 0 0 0.016417 1 77995 42.001 14.886 1 2309 203 1207 1340 3742 3742 GTNTSSPYDAGADYLR 16 0 1 Phospho (STY) _GTNTSS(ph)PYDAGADYLR_ GTNTS(0.007)S(0.993)PYDAGADYLR GT(-76.82)NT(-50.58)S(-21.38)S(21.38)PY(-57.83)DAGADY(-94.37)LR 0 0 1 0 Q8ND82;Q9UJJ2 Q8ND82 Q8ND82 ZNF280C Zinc finger protein 280C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 884.364 2 884.364713 1766.71487 65492.5 0.44957 0.00039759 0.010966 9.6984E-06 0.46054 0.00040729 884.364564290856 889.368651303545 83.914 1.7042 83.914 82.915 84.62 0 789 155 8 0 0 0 3.9884E-51 3 44919 151.59 135.34 6 0.7565 0.9554 0 114000000 68771000 45233000 2310 1159 1208 1341 3743;3744;3745 3743 2235 GTPPLTPSDSPQTR 14 0 1 2 Phospho (STY) _GT(ph)PPLTPSDS(ph)PQTR_ GT(0.989)PPLT(0.013)PS(0.29)DS(0.44)PQT(0.268)R GT(18.51)PPLT(-18.51)PS(-1.86)DS(1.86)PQT(-2.11)R 0 0 2 0 A8K559;Q6NZY4 A8K559 A8K559 ZCCHC8 Zinc finger CCHC domain-containing protein 8 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 812.34 2 807.334043 1612.65353 NaN NaN NaN -0.10395 -8.3919E-05 NaN NaN NaN NaN 58.985 0.45075 58.985 58.692 59.143 3.8147E-06 0 0 0 0.0019202 1 26394 46.156 31.466 10 NaN NaN 0 3224400 0 3224400 2311 472 1209 1342 3746 3746 822;2743 GTPPPVFTPPLPK 13 1 0 2 Phospho (STY) _GT(ph)PPPVFT(ph)PPLPK_ GT(1)PPPVFT(1)PPLPK GT(64.04)PPPVFT(64.04)PPLPK 0 0 2 0 A8K559;Q6NZY4 A8K559 A8K559 ZCCHC8 Zinc finger CCHC domain-containing protein 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 754.3524 2 754.353519 1506.69248 69755.53 0.79694 0.00060118 0.0038243 2.8849E-06 0.80077 0.00060406 754.35333183698 758.360411720604 121.54 1.0418 121.54 121.03 122.07 7.6294E-06 401 80 7 0 0 0 0.001436 3 73619 64.04 43.933 1 1.727 2.1871 0 43199000 14453000 28747000 2312 472 1210 1343 3747;3748;3749 3747 2744;2745 GTPPPVFTPPLPK 13 1 0 Phospho (STY) _GT(ph)PPPVFTPPLPK_ GT(0.999)PPPVFT(0.001)PPLPK GT(28.7)PPPVFT(-28.7)PPLPK 0 0 1 0 A8K559;Q6NZY4 A8K559 A8K559 ZCCHC8 Zinc finger CCHC domain-containing protein 8 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 718.3781 2 714.370353 1426.72615 NaN NaN NaN 0.15952 0.00011396 NaN NaN NaN NaN 117.8 0.34959 117.8 117.52 117.87 0 0 0 0 0.020134 1 70531 43.382 32.553 2 NaN NaN 0 4544700 0 4544700 2313 472 1210 1344 3750 3750 2744;2745 GTQEFSPLCLR 11 0 1 Phospho (STY) _GTQEFS(ph)PLCLR_ GT(0.027)QEFS(0.973)PLCLR GT(-15.55)QEFS(15.55)PLCLR 0 0 1 0 A6NHQ4 A6NHQ4 A6NHQ4 C17orf96 Uncharacterized protein C17orf96 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 699.3132 2 694.307427 1386.6003 NaN NaN NaN NaN NaN NaN NaN NaN NaN 106.45 1 106.45 105.95 106.95 -7.6294E-06 0 0 0 0.0029948 1 61959 54.7 41.646 2 2314 428 1211 1345 3751 3751 741 GVGSGPHPPDTQQPSPSK 18 1 0 Phospho (STY) _GVGSGPHPPDTQQPS(ph)PSK_ GVGS(0.001)GPHPPDT(0.05)QQPS(0.76)PS(0.19)K GVGS(-30.74)GPHPPDT(-11.82)QQPS(6.02)PS(-6.02)K 0 0 1 0 Q8NDL6;Q68CZ2;E9PCX8;Q59GW4 Q8NDL6 Q8NDL6 DKFZp434I2435;TNS3 Tensin-3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 620.95 3 618.279028 1851.81526 77173.78 0.52269 0.00032317 0.15673 9.6905E-05 0.67942 0.00042007 618.279078856682 620.950428800608 49.933 0.88425 49.933 49.432 50.316 0 411 76 7 0 0 0 6.3656E-05 1 19871 46.833 42.731 4 1.2049 1.5292 0 39443000 16270000 23173000 2315 1116 1212 1346 3752 3752 2114;2115 GVGSGPHPPDTQQPSPSK 18 1 0 Phospho (STY) _GVGSGPHPPDTQQPS(ph)PSK_ GVGSGPHPPDT(0.024)QQPS(0.92)PS(0.057)K GVGS(-45.2)GPHPPDT(-15.87)QQPS(12.12)PS(-12.12)K 0 0 1 0 Q8NDL6;Q68CZ2;E9PCX8;Q59GW4 Q8NDL6 Q8NDL6 DKFZp434I2435;TNS3 Tensin-3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 930.9238 2 926.914905 1851.81526 64420.56 0.57186 0.00053007 0.58367 0.00054101 1.1555 0.0010711 926.915486008403 930.922719308419 49.956 0.78467 49.956 49.494 50.279 0 416 68 11 0 0 0 5.3827E-05 2 19941 51.463 43.683 4 1.3034 1.6541 0 39178000 16223000 22956000 2316 1116 1212 1346 3753;3754 3754 2114;2115 GVGSGPHPPDTQQPSPSK 18 1 0 Phospho (STY) _GVGSGPHPPDTQQPSPS(ph)K_ GVGS(0.004)GPHPPDT(0.034)QQPS(0.434)PS(0.529)K GVGS(-21.33)GPHPPDT(-11.95)QQPS(-0.86)PS(0.86)K 0 0 1 0 Q8NDL6;Q68CZ2;E9PCX8;Q59GW4 Q8NDL6 Q8NDL6 DKFZp434I2435;TNS3 Tensin-3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 618.2791 3 618.279028 1851.81526 77203.83 0.83049 0.00051347 -0.56592 -0.0003499 0.26457 0.00016358 618.278412742967 621.284423652169 26.637 1.1967 26.637 26.167 27.364 0 233 58 8 0 0 0 0.0002878 1 12555 40.369 40.369 4 1.0994 0.83986 0 17490000 8923000 8567400 2317 1116 1212 1346 3755 3755 2114;2115 GVLHTFSPSPK 11 1 0 Phospho (STY) _GVLHTFS(ph)PSPK_ GVLHT(0.352)FS(0.645)PS(0.004)PK GVLHT(-2.64)FS(2.64)PS(-22.56)PK 0 0 1 0 A0A024R7K7;A0A024R7M6;Q86YP4;B4E0Q6;B4DKZ7 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 629.3091 2 625.302471 1248.59039 NaN NaN NaN -0.08038 -5.0262E-05 NaN NaN NaN NaN 82.826 0.18253 82.826 82.752 82.935 0 0 0 0 0.00069295 1 44287 77.597 61.219 3 NaN NaN 0 6441700 0 6441700 2318 136 1213 1347 3756 3756 202;203 GVLHTFSPSPK 11 1 0 Phospho (STY) _GVLHTFS(ph)PSPK_ GVLHT(0.001)FS(0.994)PS(0.005)PK GVLHT(-29.85)FS(22.96)PS(-22.96)PK 0 0 1 0 A0A024R7K7;A0A024R7M6;Q86YP4;B4E0Q6;B4DKZ7 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 625.3034 2 625.302471 1248.59039 NaN NaN NaN 0.2458 0.0001537 NaN NaN NaN NaN 83.11 0.30493 83.11 82.978 83.283 0 0 0 0 1.5426E-54 1 44532 145.14 113.95 3 NaN NaN 0 10630000 10630000 0 2319 136 1213 1347 3757 3757 202;203 GVLHTFSPSPK 11 1 0 Phospho (STY) _GVLHTFS(ph)PSPK_ GVLHT(0.271)FS(0.699)PS(0.03)PK GVLHT(-4.11)FS(4.11)PS(-13.68)PK 0 0 1 0 A0A024R7K7;A0A024R7M6;Q86YP4;B4E0Q6;B4DKZ7 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 625.3035 2 625.302471 1248.59039 75744.3 1.0691 0.00066851 0.15517 9.7029E-05 1.2243 0.00076554 625.302714301572 629.309542767442 70.045 1.5492 70.045 69.066 70.616 0 486 132 6 0 0 0 0.009586 2 43815 53.557 48.094 3 1.9504 1.4053 0 20881000 6738800 14142000 2320 136 1213 1347 3758;3759 3758 202;203 GVLHTFSPSPK 11 1 0 2 Phospho (STY) _GVLHTFS(ph)PS(ph)PK_ GVLHT(0.001)FS(0.999)PS(1)PK GVLHT(-30.62)FS(30.62)PS(54.74)PK 0 0 2 0 A0A024R7K7;A0A024R7M6;Q86YP4;B4E0Q6;B4DKZ7 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 669.293 2 665.285636 1328.55672 NaN NaN NaN -0.23584 -0.0001569 NaN NaN NaN NaN 84.089 2.0104 84.089 82.944 84.954 0 0 0 0 6.7174E-32 2 45094 125.89 110.99 3 NaN NaN 0 116280000 0 116280000 2321 136 1213 1348 3760;3761 3761 202;203 GVNTFSPEGR 10 0 1 Phospho (STY) _GVNTFS(ph)PEGR_ GVNTFS(1)PEGR GVNT(-49.97)FS(49.97)PEGR 0 0 1 0 Q5U0A0;A0A109NGN6;P28066 Q5U0A0 Q5U0A0 PSMA5 Proteasome subunit alpha type;Proteasome subunit alpha type-5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 572.2453 2 572.245153 1142.47575 79610.21 0.49154 0.00028128 0.72373 0.00041415 1.2153 0.00069543 572.245682268922 577.249629071675 55.608 1.4419 55.608 54.802 56.244 -3.8147E-06 573 117 6 0 0 0 9.9138E-08 2 23544 126.19 111.51 2 1.1762 1.4814 0 53801000 24251000 29550000 2322 371 1214 1349 3762;3763 3762 592 GVQVPASPDTVPQPSLR 17 0 1 Phospho (STY) _GVQVPAS(ph)PDTVPQPSLR_ GVQVPAS(0.978)PDT(0.022)VPQPSLR GVQVPAS(16.51)PDT(-16.51)VPQPS(-38.82)LR 0 0 1 0 A8K5A5;A0A024R1A2;Q92613;F2Z2B6;F2Z3N8 A8K5A5 A8K5A5 PHF16;JADE3 Protein Jade-3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 919.4583 2 914.453666 1826.89278 63706.57 0.80066 0.00073216 0.20663 0.00018896 1.0073 0.00092112 914.955255522064 919.458271748253 97.679 0.77308 97.679 97.289 98.062 0 335 63 7 0 0 0 1.409E-09 2 55112 87.001 69.192 3 0.62021 0.78234 0 66918000 41491000 25428000 2323 43 1215 1350 3764;3765 3765 51 GVQVPVSPGTIPQPVAR 17 0 1 Phospho (STY) _GVQVPVS(ph)PGTIPQPVAR_ GVQVPVS(0.906)PGT(0.094)IPQPVAR GVQVPVS(9.85)PGT(-9.85)IPQPVAR 0 0 1 0 D6RCS1;D6RC05;D6RBB3;D6RFK0;D6RGE7;B4DM93;Q6IE81 D6RCS1 D6RCS1 JADE1 Protein Jade-1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 891.9707 2 891.469119 1780.92368 67074.76 0.74321 0.00066255 0.00033455 2.9824E-07 0.74354 0.00066284 891.970786841653 896.473076308762 109.92 0.46316 109.92 109.69 110.15 7.6294E-06 125 35 5 0 0 0 5.9941E-05 1 64778 58.676 58.676 2 0.4878 0.58534 0 17681000 9685400 7995200 2324 641 1216 1351 3766 3766 1058 GVQVPVSPGTIPQPVAR 17 0 1 Phospho (STY) _GVQVPVS(ph)PGTIPQPVAR_ GVQVPVS(0.946)PGT(0.054)IPQPVAR GVQVPVS(12.46)PGT(-12.46)IPQPVAR 0 0 1 0 D6RCS1;D6RC05;D6RBB3;D6RFK0;D6RGE7;B4DM93;Q6IE81 D6RCS1 D6RCS1 JADE1 Protein Jade-1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 891.9714 2 891.469119 1780.92368 70994.72 1.2334 0.0010996 0.38957 0.00034729 1.623 0.0014468 891.468710696429 896.474229527105 117.18 0.42979 117.18 116.97 117.4 -7.6294E-06 128 39 5 0 0 0 0.00010745 2 75427 52.247 49.934 2 0.84419 0.68254 0 7352300 3739700 3612600 2325 641 1216 1351 3767;3768 3767 1058 GVSFTFGAEVVAK 13 1 0 Unmodified _GVSFTFGAEVVAK_ 0 0 0 0 E9PMD7;A0A140VJS9;B3KXM2;P62136;Q9UPN1;F8VYE8;F8VR82;B4DNE3;A0A024RBP2;F8W0W8;P36873 E9PMD7;B4DNE3 B4DNE3 PPP1CA;PPP1CC Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 660.3583 2 656.350803 1310.68705 NaN NaN NaN NaN NaN NaN NaN NaN NaN 132.67 1 132.67 132.17 133.17 -1.5259E-05 0 0 0 0.018241 1 80710 41.54 28.187 1 2326 201;378 1217 1352 3769 3769 GVTIASGGVLPNIHPELLAK 20 1 0 Unmodified _GVTIASGGVLPNIHPELLAK_ 0 0 0 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-SECPEP 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 665.3896 3 662.717597 1985.13096 75969.7 1.1589 0.00076802 -0.16112 -0.00010678 0.99778 0.00066125 662.717491405367 665.723208964391 123.71 0.3838 123.71 123.52 123.9 -7.6294E-06 154 37 7 0 0 0 0.0025735 1 79982 32.565 32.565 1 1.0493 0.80186 0 17444000 9609500 7834800 2327 935 1218 1353 3770 3770 GVTIPYRPK 9 1 1 Unmodified _GVTIPYRPK_ 0 0 0 1 H3BSS4;Q15366;B4DRD7;H3BRU6;B4DLC0;F8VRH0;F8VZX2 H3BSS4 H3BSS4 PCBP2 Poly(rC)-binding protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 524.8179 2 515.805834 1029.59712 85030.84 0.95031 0.00049017 0.15587 8.0399E-05 1.1062 0.00057057 515.805937930085 524.817009466137 91.508 0.61832 91.508 91.221 91.839 0 126 50 4 0 0 0 0.027947 1 50633 54.549 46.838 1 2.183 2.5826 0 48954000 13301000 35653000 2328 872 1219 1354 3771 3771 GYAFIEFASFEDAK 14 1 0 Unmodified _GYAFIEFASFEDAK_ 0 0 0 0 B3KM80;Q6ZS99;A0A024R4A0;P19338;H7BY16;Q9BQ02;B3KTP9 B3KM80 B3KM80 NCL Nucleolin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 797.8775 2 797.874839 1593.73512 70520.38 0.99894 0.00079703 0.0058974 4.7054E-06 1.0048 0.00080174 797.87446552254 801.882054189462 129.76 0.26178 129.76 129.62 129.88 0 58 23 4 0 0 0 0.0086156 1 78953 60.434 54.588 1 0.74448 0.88091 0 4093300 2385500 1707900 2329 87 1220 1355 3772 3772 GYAFIEFASFEDAK 14 1 0 Unmodified _GYAFIEFASFEDAK_ 0 0 0 0 B3KM80;Q6ZS99;A0A024R4A0;P19338;H7BY16;Q9BQ02;B3KTP9 B3KM80 B3KM80 NCL Nucleolin MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 801.8824 2 797.874839 1593.73512 NaN NaN NaN NaN NaN NaN NaN NaN NaN 130.16 1 130.16 129.66 130.66 0 0 0 0 0.00044715 1 79151 108.67 92.776 1 2330 87 1220 1355 3773 3773 GYAFIEFASFEDAK 14 1 0 Unmodified _GYAFIEFASFEDAK_ 0 0 0 0 B3KM80;Q6ZS99;A0A024R4A0;P19338;H7BY16;Q9BQ02;B3KTP9 B3KM80 B3KM80 NCL Nucleolin MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 797.8757 2 797.874839 1593.73512 NaN NaN NaN NaN NaN NaN NaN NaN NaN 130.33 1 130.33 129.83 130.83 0 0 0 0 0.0024358 1 79255 113.63 94.358 1 2331 87 1220 1355 3774 3774 GYAFIEFASFEDAK 14 1 0 Phospho (STY) _GYAFIEFAS(ph)FEDAK_ GYAFIEFAS(1)FEDAK GY(-62.57)AFIEFAS(62.57)FEDAK 0 0 1 0 B3KM80;Q6ZS99;A0A024R4A0;P19338;H7BY16;Q9BQ02;B3KTP9 B3KM80 B3KM80 NCL Nucleolin ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 837.8578 2 837.858004 1673.70146 NaN NaN NaN -0.14822 -0.00012419 NaN NaN NaN NaN 130.43 0.18439 130.43 130.31 130.49 0 0 0 0 0.00037509 1 79285 62.891 51.632 2 NaN NaN 0 1892600 1892600 0 2332 87 1220 1356 3775 3775 115 GYAFIEYEHER 11 0 1 Unmodified _GYAFIEYEHER_ 0 0 0 0 A8KAQ5;A0A024QZD5;P08621;M0QYR1 A8KAQ5 A8KAQ5 SNRP70;SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 707.3255 2 707.325316 1412.63608 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.61 1 105.61 105.11 106.11 0 0 0 0 0.0034167 1 61298 60.518 42.207 1 2333 14 1221 1357 3776 3776 GYFEYIEENK 10 1 0 Unmodified _GYFEYIEENK_ 0 0 0 0 Q96BA7;B3KX72;Q00839;B4DLR3;Q5RI18 Q96BA7 Q96BA7 HNRNPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 646.2963 2 646.295693 1290.57683 78338.98 0.79885 0.00051629 -0.24977 -0.00016143 0.54908 0.00035487 646.295205766477 650.302507729609 98.799 0.86692 98.799 98.203 99.07 0 144 70 4 0 0 0 9.9712E-05 1 56098 93.551 73.847 1 1.7048 2.0271 0 11678000 4397500 7280500 2334 610 1222 1358 3777 3777 GYGFVDFDSPAAAQK 15 1 0 Phospho (STY) _GYGFVDFDS(ph)PAAAQK_ GY(0.001)GFVDFDS(0.999)PAAAQK GY(-31.9)GFVDFDS(31.9)PAAAQK 0 0 1 0 E7EPF2;D3DPB2;C9J9B2;E7ETU5;F6Y5H0;A0A0S2Z499;B4DN88;A0A0S2Z4B3;C9JIJ9;A0A1B0GUW5;B4E2S3;P29558;Q6XE24 E7EPF2 E7EPF2 RBMS1;RBMS3 RNA-binding motif, single-stranded-interacting protein 1;RNA-binding motif, single-stranded-interacting protein 3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 830.8618 2 826.853253 1651.69195 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.21 1 110.21 109.71 110.71 0 0 0 0 0.00089983 1 65011 45.33 30.064 2 2335 352 1223 1359 3778 3778 549 GYSFTTTAER 10 0 1 Unmodified _GYSFTTTAER_ 0 0 0 0 B4E335;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;V9HVZ7;B4E3A4;P63261;B4DVQ0;I3L3I0;I3L1U9;I3L4N8 B4E335;B4E3A4 B4E3A4 PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 566.7672 2 566.767103 1131.51965 81031.34 0.27718 0.0001571 0.38677 0.00021921 0.66396 0.00037631 566.767104254514 571.771245025662 68.686 2.6762 68.686 67.814 70.49 0 595 254 5 0 0 0 1.3482E-05 4 34192 107.69 91.36 1 1.8273 2.2987 0 45892000 19165000 26727000 2336 683;685 1224 1360 3779;3780;3781;3782 3781 GYSFTTTAER 10 0 1 Unmodified _GYSFTTTAER_ 0 0 0 0 B4E335;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;V9HVZ7;B4E3A4;P63261;B4DVQ0;I3L3I0;I3L1U9;I3L4N8 B4E335;B4E3A4 B4E3A4 PS1TP5BP1;ACTB;ACTG1;HEL-176 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 566.7673 2 566.767103 1131.51965 NaN NaN NaN -0.1682 -9.5333E-05 NaN NaN NaN NaN 68.012 0.32433 68.012 67.814 68.138 0 0 0 0 3.5749E-05 2 33512 85.731 57.004 1 NaN NaN 0 9755000 9755000 0 2337 683;685 1224 1360 3783;3784 3784 GYYSPGIVSTR 11 0 1 Phospho (STY) _GYYS(ph)PGIVSTR_ GYY(0.003)S(0.993)PGIVST(0.003)R GY(-41.9)Y(-24.7)S(24.7)PGIVS(-33.6)T(-25.71)R 0 0 1 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 645.2946 2 640.28956 1278.56457 76443.89 1.0264 0.00065722 0.14449 9.2514E-05 1.1709 0.00074973 640.289652029898 645.293803470704 85.817 0.98506 85.817 85.334 86.319 0 488 91 8 0 0 0 0.0018601 1 54913 74.987 61.634 5 1.6824 1.1364 0 78517000 28271000 50245000 2338 1044 1225 1361 3785 3785 1949 GYYSPYSVSGSGSTAGSR 18 0 1 Phospho (STY) _GYYS(ph)PYSVSGSGSTAGSR_ GYY(0.001)S(0.999)PYSVSGSGSTAGSR GY(-44.93)Y(-29.82)S(29.82)PY(-47.75)S(-42.5)VS(-69.27)GS(-77.05)GS(-88.31)T(-88.31)AGS(-94.01)R 0 0 1 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 936.8876 2 931.88327 1861.75199 63755.15 0.66486 0.00061957 0.13896 0.0001295 0.80382 0.00074907 931.883361423265 936.887579497423 72.095 0.90517 72.095 71.697 72.602 0 269 75 5 0 0 0 2.936E-17 4 36475 103.04 89.379 10 1.1906 1.4769 0 35274000 15712000 19562000 2339 1070 1226 1362 3786;3787;3788;3789 3788 2015;2016;2017;2931 GYYSPYSVSGSGSTAGSR 18 0 1 Phospho (STY) _GYYSPYSVSGSGS(ph)TAGSR_ GYYSPYSVS(0.033)GS(0.069)GS(0.299)T(0.299)AGS(0.299)R GY(-68.35)Y(-63.6)S(-58.34)PY(-47.27)S(-28)VS(-9.53)GS(-6.36)GS(0)T(0)AGS(0)R 0 0 1 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 936.8878 2 931.88327 1861.75199 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.361 1 73.361 72.861 73.861 0 0 0 0 2.3634E-08 1 37364 75.548 64.761 10 2340 1070 1226 1362 3790 3790 2015;2016;2017;2931 GYYSPYSVSGSGSTAGSR 18 0 1 Phospho (STY) _GYYS(ph)PYSVSGSGSTAGSR_ GY(0.025)Y(0.106)S(0.861)PY(0.005)S(0.003)VSGSGSTAGSR GY(-15.32)Y(-9.08)S(9.08)PY(-22.65)S(-24.79)VS(-38.04)GS(-43.77)GS(-45.97)T(-47.78)AGS(-47.56)R 0 0 1 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 936.8876 2 931.88327 1861.75199 64346.8 0.8635 0.00080468 -0.015717 -1.4646E-05 0.84778 0.00079003 931.882813707081 936.887497729381 73.181 1.5656 73.181 72.509 74.074 0 513 137 6 0 0 0 1.4375E-05 2 46181 53.519 41.027 10 3.0555 2.0698 0 67998000 15920000 52079000 2341 1070 1226 1362 3791;3792 3791 2015;2016;2017;2931 HAASTVQILGAEK 13 1 0 Unmodified _HAASTVQILGAEK_ 0 0 0 0 B3KN82;Q9Y2X3 B3KN82 B3KN82 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 666.8721 2 662.864608 1323.71466 75720.88 1.5463 0.001025 -0.88949 -0.00058961 0.65678 0.00043535 662.863948377264 666.871164624054 102.32 1.2211 102.32 101.73 102.95 7.6294E-06 453 95 7 0 0 0 3.8105E-11 3 59230 110.15 77.932 1 0.76648 0.96641 0 49074000 26984000 22090000 2342 578 1227 1363 3793;3794;3795 3795 HAATAPPHSCPPDDTK 16 1 0 Unmodified _HAATAPPHSCPPDDTK_ 0 0 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 570.9322 3 567.926499 1700.75767 80197.17 0.59945 0.00034044 -0.074852 -4.251E-05 0.5246 0.00029793 568.260839276997 570.597987599176 67.553 0.59778 67.553 67.315 67.913 0 174 51 5 0 0 0 4.0185E-05 2 33185 63.614 52.67 1 0.55248 0.70099 0 40892000 22268000 18623000 2343 1035 1228 1364 3796;3797 3797 HADIVTTTTHK 11 1 0 Unmodified _HADIVTTTTHK_ 0 0 0 0 G3V2Y4;H0YIZ0;B4DJ63;B4DLV4;B4DW25;B4DP88;B4E1G2;Q5BJF5;Q5HYG8;B4DJQ3;A0A024RB99;V9HW06;Q53ET4;B4DWA7;P34897 G3V2Y4 G3V2Y4 SHMT2;DKFZp686P09201;HEL-S-51e Serine hydroxymethyltransferase;Serine hydroxymethyltransferase, mitochondrial MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 411.2219 3 408.55081 1222.6306 95703.84 -0.28195 -0.00011519 -0.07549 -3.0842E-05 -0.35744 -0.00014603 408.550892908605 411.222092889724 83.159 0.36235 83.159 83.052 83.414 0 116 28 7 0 0 0 0.01242 1 44579 36.32 36.32 1 2.8122 3.5425 0 50398000 14755000 35643000 2344 193 1229 1365 3798 3798 HAELSGSPLK 10 1 0 Phospho (STY) _HAELS(ph)GSPLK_ HAELS(0.696)GS(0.304)PLK HAELS(3.59)GS(-3.59)PLK 0 0 1 0 D6W5A2;E7EV10;Q9BTC8 D6W5A2 D6W5A2 MTA3 Metastasis-associated protein MTA3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 559.7657 2 559.765721 1117.51689 80462.7 0.82623 0.00046249 -0.42432 -0.00023752 0.4019 0.00022497 559.765433577915 563.77254621863 33.94 0.90964 33.94 33.612 34.522 0 236 72 5 0 0 0 1.0849E-21 1 18670 150.09 103.27 2 1.5053 0.98228 0 44633000 18737000 25896000 2345 778 1230 1366 3799 3799 1317 HAFSLK 6 1 0 Unmodified _HAFSLK_ 0 0 0 0 A0A140VJZ1;P45974 A0A140VJZ1 A0A140VJZ1 USP5 Ubiquitin carboxyl-terminal hydrolase 5 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 355.7074 2 351.700306 701.38606 NaN NaN NaN -0.33855 -0.00011907 NaN NaN NaN NaN 96.25 0.48167 96.25 95.979 96.461 0 0 0 0 0.00046771 1 54174 74.717 17.644 1 NaN NaN 0 10474000 0 10474000 2346 380 1231 1367 3800 3800 HAGSLLNHR 9 0 1 Unmodified _HAGSLLNHR_ 0 0 0 0 O15015 O15015 O15015 ZNF646 Zinc finger protein 646 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 335.5183 3 335.517663 1003.53116 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.827 1 96.827 96.327 97.327 0 0 0 0 0.013796 1 54674 60.589 0 1 2347 921 1232 1368 3801 3801 HAHSLGSLDASK 12 1 0 Unmodified _HAHSLGSLDASK_ 0 0 0 0 A0A1B0GUH9;A0PJI9;A0A1P0AZG4 A0A1B0GUH9 A0A1B0GUH9 C10orf12 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 410.8823 3 408.210676 1221.6102 96915.41 0.029596 1.2081E-05 -0.36685 -0.00014975 -0.33725 -0.00013767 408.210661164724 410.881918204518 116.06 0.81445 116.06 115.73 116.54 0 157 72 5 0 0 0 0.022629 1 69496 27.33 17.674 1 1.5552 1.8466 0 11240000 5302500 5937100 2348 385 1233 1369 3802 3802 HAIPIIK 7 1 0 Unmodified _HAIPIIK_ 0 0 0 0 A0A0D9SFB3;A0A0D9SG12;A0A024R9A4;B5BTY4;Q59GX6;A0A0D9SF53;O15523;O00571;B4DLU5;C9J8G5;C9J081;B4E3C4;B4E010 A0A0D9SFB3 A0A0D9SFB3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3Y;ATP-dependent RNA helicase DDX3X ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 400.2678 2 396.260531 790.506509 NaN NaN NaN 0.21325 8.4503E-05 NaN NaN NaN NaN 108.87 0.23503 108.87 108.72 108.95 -7.6294E-06 0 0 0 0.015361 1 63821 61.006 38.716 1 NaN NaN 0 4384700 0 4384700 2349 160 1234 1370 3803 3803 HAPINSAQHLDNVDQTGPK 19 1 0 Unmodified _HAPINSAQHLDNVDQTGPK_ 0 0 0 0 E9PPY3;O43159 E9PPY3 E9PPY3 RRP8 Ribosomal RNA-processing protein 8 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 681.3413 3 681.339848 2040.99772 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.861 1 93.861 93.361 94.361 0 0 0 0 0.00088243 1 52417 60.062 32.212 1 2350 815 1235 1371 3804 3804 HAQGTVLHR 9 0 1 Unmodified _HAQGTVLHR_ 0 0 0 0 E7EP81;B4E0F2;I3L167;B3KUH7;B3KSY4;B4DKU9;A0A0A6YYL4;P57737 E7EP81 E7EP81 CORO7;CORO7-PAM16;hCG_1787779 Coronin;Coronin-7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 343.5256 3 340.189547 1017.54681 104302.2 -0.53245 -0.00018113 0.43033 0.00014639 -0.10212 -3.4739E-05 340.189662955961 343.525780158999 83.371 0.4567 83.371 83.138 83.595 0 126 39 5 0 0 0 0.00040523 2 44689 76.064 59.861 1 2.1075 2.5931 0 23723000 8725400 14998000 2351 305 1236 1372 3805;3806 3806 HASPILPITEFSDIPR 16 0 1 Phospho (STY) _HAS(ph)PILPITEFSDIPR_ HAS(1)PILPITEFSDIPR HAS(69.63)PILPIT(-69.63)EFS(-70.22)DIPR 0 0 1 0 A0A024RBE7;P42167;G5E972;H0YJH7 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 937.4695 2 936.966409 1871.91826 62793.36 0.76637 0.00071806 0.00021046 1.9719E-07 0.76658 0.00071826 937.467440590204 942.472335496628 133.45 1.0739 133.45 132.53 133.6 0 322 78 7 0 0 0 1.1007E-11 3 81061 93.823 93.823 3 0.44801 0.55438 0 34077000 26275000 7802200 2352 196 1237 1373 3807;3808;3809 3809 308 HASPILPITEFSDIPR 16 0 1 Phospho (STY) _HAS(ph)PILPITEFSDIPR_ HAS(1)PILPITEFSDIPR HAS(48.82)PILPIT(-48.82)EFS(-70.71)DIPR 0 0 1 0 A0A024RBE7;P42167;G5E972;H0YJH7 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 625.3145 3 624.980031 1871.91826 76078.94 0.73872 0.00046169 -0.42904 -0.00026814 0.30968 0.00019355 624.97974829729 628.31591452404 133.37 0.96396 133.37 132.6 133.57 0 382 70 7 0 0 0 8.3718E-07 2 80978 77.031 77.031 3 0.46212 0.56814 0 28299000 19248000 9051200 2353 196 1237 1373 3810;3811 3811 308 HASPILPITEFSDIPR 16 0 1 Phospho (STY) _HAS(ph)PILPITEFSDIPR_ HAS(1)PILPITEFSDIPR HAS(40.47)PILPIT(-40.47)EFS(-40.47)DIPR 0 0 1 0 A0A024RBE7;P42167;G5E972;H0YJH7 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 936.9669 2 936.966409 1871.91826 NaN NaN NaN NaN NaN NaN NaN NaN NaN 132.48 1 132.48 131.98 132.98 0 0 0 0 0.001118 1 80599 46.318 27.722 3 2354 196 1237 1373 3812 3812 308 HASPILPITEFSDIPR 16 0 1 Phospho (STY) _HAS(ph)PILPITEFSDIPR_ HAS(1)PILPITEFSDIPR HAS(38.87)PILPIT(-38.87)EFS(-46.56)DIPR 0 0 1 0 A0A024RBE7;P42167;G5E972;H0YJH7 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 628.3176 3 624.980031 1871.91826 75830.38 1.001 0.00062561 -0.12658 -7.9113E-05 0.87443 0.0005465 624.98012375616 628.315994832836 133.68 0.74698 133.68 133.41 134.16 0 513 71 12 0 0 0 8.1127E-05 1 86109 52.19 45.62 3 0.92008 0.6139 0 144380000 71693000 72686000 2355 196 1237 1373 3813 3813 308 HASPILPITEFSDIPR 16 0 1 Phospho (STY) _HAS(ph)PILPITEFSDIPR_ HAS(1)PILPITEFSDIPR HAS(44.37)PILPIT(-44.37)EFS(-48.65)DIPR 0 0 1 0 A0A024RBE7;P42167;G5E972;H0YJH7 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 941.9718 2 936.966409 1871.91826 63230.02 0.87289 0.00081787 0.19076 0.00017874 1.0636 0.0009966 937.468199150302 941.970771113499 133.71 0.82898 133.71 133.3 134.13 0 563 79 11 0 0 0 0.00012802 1 86115 55.885 55.885 3 0.88432 0.58995 0 145510000 75786000 69719000 2356 196 1237 1373 3814 3814 308 HASSSPESPKPAPAPGSHR 19 1 1 Phospho (STY) _HASSSPES(ph)PKPAPAPGSHR_ HAS(0.067)S(0.061)S(0.061)PES(0.812)PKPAPAPGSHR HAS(-10.86)S(-11.27)S(-11.27)PES(10.86)PKPAPAPGS(-35.14)HR 0 0 1 1 A0A140VK53;Q9UQ35;I3L4D8;I3L182;Q9UQ39 A0A140VK53 A0A140VK53 SRRM2 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 665.6457 3 659.637327 1975.89015 76028.45 0.7025 0.00046339 -0.53399 -0.00035224 0.16851 0.00011115 659.971204879991 665.644184657617 66.821 0.29117 66.821 66.673 66.964 0 77 20 6 0 0 0 2.1471E-05 2 32712 49.528 39.247 5 0.81683 0.95291 0 33147000 17736000 15411000 2357 383 1238 1374 3815;3816 3816 612 HASSSPESPKPAPAPGSHR 19 1 1 Phospho (STY) _HASSSPES(ph)PKPAPAPGSHR_ HAS(0.008)S(0.033)S(0.03)PES(0.929)PKPAPAPGSHR HAS(-20.55)S(-14.45)S(-14.93)PES(14.45)PKPAPAPGS(-42.16)HR 0 0 1 1 A0A140VK53;Q9UQ35;I3L4D8;I3L182;Q9UQ39 A0A140VK53 A0A140VK53 SRRM2 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 666.3201 3 659.637327 1975.89015 73360.66 0.7501 0.00049479 0.048232 3.1816E-05 0.79833 0.00052661 659.971538928694 665.644789427456 15.262 0.33509 15.262 15.078 15.413 9.5367E-07 41 7 10 0 0 0 5.6612E-11 2 2850 80.83 72.23 5 0.67641 0.52213 0 97035000 58101000 38934000 2358 383 1238 1374 3817;3818 3817 612 HASSSPESPKPAPAPGSHR 19 1 1 Phospho (STY) _HASSSPES(ph)PKPAPAPGSHR_ HAS(0.02)S(0.013)S(0.013)PES(0.953)PKPAPAPGSHR HAS(-16.79)S(-18.51)S(-18.51)PES(16.79)PKPAPAPGS(-48.99)HR 0 0 1 1 A0A140VK53;Q9UQ35;I3L4D8;I3L182;Q9UQ39 A0A140VK53 A0A140VK53 SRRM2 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 989.3943 2 988.952353 1975.89015 61063.96 0.086666 8.5709E-05 0.33575 0.00033204 0.42242 0.00041775 988.952735947329 997.964303456538 15.262 0.13088 15.262 15.158 15.289 0 14 2 7 0 0 0 1.4795E-13 1 2891 85.937 73.17 5 0.64053 0.48917 0 21510000 13283000 8226500 2359 383 1238 1374 3819 3819 612 HASSSPESPKPAPAPGSHR 19 1 1 Phospho (STY) _HASSSPES(ph)PKPAPAPGSHR_ HAS(0.027)S(0.027)S(0.024)PES(0.921)PKPAPAPGSHR HAS(-15.27)S(-15.27)S(-15.83)PES(15.27)PKPAPAPGS(-74.39)HR 0 0 1 1 A0A140VK53;Q9UQ35;I3L4D8;I3L182;Q9UQ39 A0A140VK53 A0A140VK53 SRRM2 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 494.9801 4 494.979815 1975.89015 85560.4 0.12967 6.4185E-05 0.30363 0.00015029 0.4333 0.00021448 494.97996828466 499.485519070061 15.262 0.33274 15.262 15.117 15.45 9.5367E-07 38 7 10 0 0 0 6.4132E-14 1 2897 83.245 59.644 5 0.77147 0.59455 0 37813000 21113000 16700000 2360 383 1238 1374 3820 3820 612 HATAEEVEEEER 12 0 1 Unmodified _HATAEEVEEEER_ 0 0 0 0 Q8TDN6;Q9NUW4;B4E0B8 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 714.8152 2 714.81551 1427.61647 NaN NaN NaN -0.37349 -0.00026698 NaN NaN NaN NaN 67.808 0.29741 67.808 67.696 67.993 0 0 0 0 1.025E-71 1 33429 154.15 122.22 1 NaN NaN 0 16815000 16815000 0 2361 1163 1239 1375 3821 3821 HATAEEVEEEERDR 14 0 2 Unmodified _HATAEEVEEEERDR_ 0 0 0 1 Q8TDN6;Q9NUW4;B4E0B8 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 573.928 3 567.25545 1698.74452 79271.06 0.66766 0.00037873 0.03367 1.91E-05 0.70133 0.00039783 567.255705159169 573.927620875552 80.583 1.9907 80.583 79.633 81.624 0 1008 183 7 0 0 0 2.3044E-27 4 42766 135.81 117.08 1 0.83168 1.0383 0 201780000 104930000 96852000 2362 1163 1240 1376 3822;3823;3824;3825 3825 HAVSEGTK 8 1 0 Unmodified _HAVSEGTK_ 0 0 0 0 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;A8K9J7;P57053;Q96A08;L0R4T3;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257 B2R4S9;A0A024RCJ2 B2R4S9 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS;HIST1H2BA;ABCF2;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 414.7141 2 414.714142 827.413731 93516.99 0.18335 7.6038E-05 0.20418 8.4677E-05 0.38753 0.00016072 414.714028467767 418.721231134896 49.048 0.18397 49.048 48.942 49.126 0 36 12 5 0 0 0 1.369E-24 1 19452 157.58 117.92 1 0.89669 1.0629 0 5936800 3451800 2485000 2363 21;211 1241 1377 3826 3826 HAVSEGTK 8 1 0 Unmodified _HAVSEGTK_ 0 0 0 0 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;A8K9J7;P57053;Q96A08;L0R4T3;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257 B2R4S9;A0A024RCJ2 B2R4S9 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS;HIST1H2BA;ABCF2;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 414.714 2 414.714142 827.413731 94143.66 0.24699 0.00010243 0.033669 1.3963E-05 0.28066 0.00011639 414.71403831897 418.7211787964 56.546 1.2613 56.546 55.541 56.802 3.8147E-06 229 104 4 0 0 0 3.8685E-59 2 24376 191.63 146.9 1 0.84826 1.0338 0 18493000 10178000 8314700 2364 21;211 1241 1377 3827;3828 3827 HAVSEGTK 8 1 0 Unmodified _HAVSEGTK_ 0 0 0 0 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;A8K9J7;P57053;Q96A08;L0R4T3;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257 B2R4S9;A0A024RCJ2 B2R4S9 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS;HIST1H2BA;ABCF2;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 418.7221 2 414.714142 827.413731 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.629 1 55.629 55.129 56.129 0 0 0 0 0.018292 1 23883 54.611 23.308 1 2365 21;211 1241 1377 3829 3829 HAVSEGTK 8 1 0 Unmodified _HAVSEGTK_ 0 0 0 0 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;A8K9J7;P57053;Q96A08;L0R4T3;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257 B2R4S9;A0A024RCJ2 B2R4S9 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS;HIST1H2BA;ABCF2;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 414.7144 2 414.714142 827.413731 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.061 1 57.061 56.561 57.561 0 0 0 0 7.3389E-14 1 24921 130.22 88.919 1 2366 21;211 1241 1377 3830 3830 HCGLSLSSTPPGK 13 1 0 3 Phospho (STY) _HCGLS(ph)LSS(ph)T(ph)PPGK_ HCGLS(0.998)LS(0.594)S(0.657)T(0.751)PPGK HCGLS(23.18)LS(-0.73)S(0.73)T(2.12)PPGK 0 0 3 0 D6R9S4;Q09GN1;Q71F23;A5D8X7;A8K8D2 D6R9S4 D6R9S4 CENPU;MLF1IP Centromere protein U MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 794.7932 2 790.784489 1579.55443 70898.73 0.97838 0.00077369 0.41431 0.00032763 1.3927 0.0011013 790.784458189584 794.792600893301 76.228 1.0555 76.228 75.707 76.762 0 278 92 4 0 0 0 0.013205 1 39501 43.761 34.479 4 0.48881 0.61951 0 33582000 20792000 12790000 2367 772 1242 1378 3831 3831 1301;1302;2813 HDLDLICR 8 0 1 Unmodified _HDLDLICR_ 0 0 0 0 E9PMD7;A0A140VJS9;B3KXM2;P62136;Q9UPN1;B7ZB67;B4DJ75;F8VYE8;V9HW04;P62140;F8VR82;B4DNE3;A0A024RBP2;F8W0W8;P36873 E9PMD7;B4DNE3 B4DNE3 PPP1CA;PPP1CC;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 526.2653 2 521.260933 1040.50731 83274.15 0.63847 0.00033281 -0.099753 -5.1997E-05 0.53872 0.00028081 521.260817763315 526.265053157534 108.27 1.1306 108.27 107.55 108.68 0 281 85 5 0 0 0 0.021042 1 63148 89.752 70.238 1 1.2775 1.6119 0 70299000 29839000 40460000 2368 201;378 1243 1379 3832 3832 HDSPDLAPNVTYSLPR 16 0 1 Phospho (STY) _HDS(ph)PDLAPNVTYSLPR_ HDS(1)PDLAPNVTYSLPR HDS(37.36)PDLAPNVT(-37.36)Y(-42.79)S(-44.84)LPR 0 0 1 0 A8K4Z6;Q9BRD0;H7C462 A8K4Z6 A8K4Z6 BUD13 BUD13 homolog ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 624.624 3 621.287524 1860.84074 NaN NaN NaN 0.058946 3.6623E-05 NaN NaN NaN NaN 107.29 0.48636 107.29 107.1 107.59 0 0 0 0 0.00078816 1 62559 46.892 32.344 4 NaN NaN 0 3225800 0 3225800 2369 468 1244 1380 3833 3833 814 HDSPDLAPNVTYSLPR 16 0 1 Phospho (STY) _HDS(ph)PDLAPNVTYSLPR_ HDS(1)PDLAPNVTYSLPR HDS(60.64)PDLAPNVT(-60.64)Y(-60.75)S(-60.64)LPR 0 0 1 0 A8K4Z6;Q9BRD0;H7C462 A8K4Z6 A8K4Z6 BUD13 BUD13 homolog ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 936.4308 2 931.427648 1860.84074 NaN NaN NaN 0.13456 0.00012533 NaN NaN NaN NaN 107.26 0.37474 107.26 107.14 107.52 -7.6294E-06 0 0 0 2.7216E-06 1 62571 66.246 49.614 4 NaN NaN 0 5326900 0 5326900 2370 468 1244 1380 3834 3834 814 HDTPDPSPLR 10 0 1 2 Phospho (STY) _HDT(ph)PDPS(ph)PLR_ HDT(1)PDPS(1)PLR HDT(68.44)PDPS(68.44)PLR 0 0 2 0 A8K4Z6;Q9BRD0 A8K4Z6 A8K4Z6 BUD13 BUD13 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 652.7514 2 647.746875 1293.4792 77469.51 0.62979 0.00040794 0.12893 8.3516E-05 0.75872 0.00049146 647.746808045228 652.751111719187 53.804 0.90254 53.804 53.325 54.227 -3.8147E-06 243 73 5 0 0 0 0.0033192 2 22504 68.44 63.131 1 0.85301 1.0039 0 13802000 6679000 7122900 2371 468 1245 1381 3835;3836 3836 815;2741 HDTVTVSSDLDQFTK 15 1 0 Phospho (STY) _HDTVTVS(ph)SDLDQFTK_ HDTVT(0.008)VS(0.495)S(0.495)DLDQFT(0.001)K HDT(-61.39)VT(-17.67)VS(0)S(0)DLDQFT(-27.42)K 0 0 1 0 Q6M1B8;A0A087WYW3;A0A024R2N6;P30414 Q6M1B8 Q6M1B8 DKFZp686J06106;NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 886.892 2 886.890564 1771.76657 NaN NaN NaN 0.59683 0.00052932 NaN NaN NaN NaN 106.82 0.40524 106.82 106.67 107.08 0 0 0 0 6.1698E-36 2 62228 125.28 101.93 5 NaN NaN 0 12739000 12739000 0 2372 67 1246 1382 3837;3838 3837 87;88 HEAMITDLEER 11 0 1 Oxidation (M) _HEAM(ox)ITDLEER_ HEAM(1)ITDLEER HEAM(93.56)ITDLEER 0 1 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 685.3178 2 680.314091 1358.61363 NaN NaN NaN 0.52814 0.0003593 NaN NaN NaN NaN 91.763 0.25566 91.763 91.691 91.947 0 0 0 0 5.1399E-06 1 50766 93.556 61.621 1 NaN NaN 0 8459400 0 8459400 2373 49 1247 1383 3839 3839 10 HEAMITDLEER 11 0 1 Oxidation (M) _HEAM(ox)ITDLEER_ HEAM(1)ITDLEER HEAM(43.31)ITDLEER 0 1 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 685.3181 2 680.314091 1358.61363 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.841 1 87.841 87.341 88.341 0 0 0 0 0.015261 1 47842 43.308 27.646 1 2374 49 1247 1383 3840 3840 10 HEAMITDLEER 11 0 1 Oxidation (M) _HEAM(ox)ITDLEER_ HEAM(1)ITDLEER HEAM(71.35)ITDLEER 0 1 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 685.3188 2 680.314091 1358.61363 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.005 1 89.005 88.505 89.505 -7.6294E-06 0 0 0 0.00061129 1 48696 71.349 44.965 1 2375 49 1247 1383 3841 3841 10 HECQANGPEDLNR 13 0 1 Unmodified _HECQANGPEDLNR_ 0 0 0 0 B7Z9M9;V9HWA6;P60981 B7Z9M9 B7Z9M9 HEL32;DSTN Destrin ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 775.339 2 770.333878 1538.6532 NaN NaN NaN -0.35234 -0.00027142 NaN NaN NaN NaN 66.936 0.26551 66.936 66.823 67.089 0 0 0 0 0.0052092 1 32861 52.391 34.079 1 NaN NaN 0 21599000 0 21599000 2376 717 1248 1384 3842 3842 HEGVFICR 8 0 1 Unmodified _HEGVFICR_ 0 0 0 0 Q96BS4;P22087;M0R299;M0QXL5;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 514.2548 2 509.250369 1016.48618 NaN NaN NaN -0.10897 -5.5493E-05 NaN NaN NaN NaN 98.185 0.17146 98.185 98.134 98.305 0 0 0 0 0.023103 1 55809 51.787 28.359 1 NaN NaN 0 3104800 0 3104800 2377 974 1249 1385 3843 3843 HEGVFICR 8 0 1 Unmodified _HEGVFICR_ 0 0 0 0 Q96BS4;P22087;M0R299;M0QXL5;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 514.255 2 509.250369 1016.48618 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.945 1 99.945 99.445 100.45 0 0 0 0 1.9904E-05 1 57102 94.407 66.882 1 2378 974 1249 1385 3844 3844 HEGVFICR 8 0 1 Unmodified _HEGVFICR_ 0 0 0 0 Q96BS4;P22087;M0R299;M0QXL5;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 509.251 2 509.250369 1016.48618 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.01 1 100.01 99.511 100.51 0 0 0 0 7.6862E-10 1 57157 127.12 109.27 1 2379 974 1249 1385 3845 3845 HEILLSQSVR 10 0 1 Unmodified _HEILLSQSVR_ 0 0 0 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 596.3408 2 591.335487 1180.65642 NaN NaN NaN 1.1253 0.00066542 NaN NaN NaN NaN 105.24 0.15594 105.24 105.18 105.34 0 0 0 0 0.00045648 1 61048 76.827 54.087 1 NaN NaN 0 1593800 0 1593800 2380 1007 1250 1386 3846 3846 HELQANCYEEVK 12 1 0 Unmodified _HELQANCYEEVK_ 0 0 0 0 G3V1A4;E9PP50;V9HWI5;E9PK25;P23528 G3V1A4 G3V1A4 CFL1;HEL-S-15 Cofilin-1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 764.3546 2 760.345923 1518.67729 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.998 1 79.998 79.498 80.498 0 0 0 0 5.1265E-09 1 42287 128.85 69.866 1 2381 808 1251 1387 3847 3847 HELSTEYIPDPER 13 0 1 Unmodified _HELSTEYIPDPER_ 0 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 529.2545 3 529.25461 1584.742 83186.07 0.59408 0.00031442 -0.32494 -0.00017198 0.26914 0.00014244 529.254442142386 532.590476527604 107.4 0.59735 107.4 107.08 107.67 0 210 46 8 0 0 0 0.01201 1 62562 31.675 31.675 1 1.0392 1.3059 0 42610000 21168000 21442000 2382 1061 1252 1388 3848 3848 HELSTEYIPDPER 13 0 1 Unmodified _HELSTEYIPDPER_ 0 0 0 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 793.8495 2 793.378277 1584.742 68896.06 0.99348 0.0007882 -0.42223 -0.00033499 0.57125 0.00045322 793.378578350233 798.381748001429 107.4 0.34029 107.4 107.19 107.53 0 95 26 5 0 0 0 8.9745E-06 1 62593 82.417 82.417 1 0.85336 1.0113 0 14867000 6653400 8213100 2383 1061 1252 1388 3849 3849 HELTEISNVDVETQSGK 17 1 0 Unmodified _HELTEISNVDVETQSGK_ 0 0 0 0 Q09666 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 629.6439 3 629.309443 1884.9065 79401.41 1.1471 0.00072187 0.35061 0.00022064 1.4977 0.00094251 629.643856793617 631.981191237289 97.238 0.42152 97.238 97.07 97.491 0 113 37 6 0 0 0 8.6357E-05 1 55010 48.053 43.051 1 1.6724 2.0411 0 18773000 8031400 10742000 2384 1042 1253 1389 3850 3850 HELTEISNVDVETQSGK 17 1 0 Unmodified _HELTEISNVDVETQSGK_ 0 0 0 0 Q09666 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 631.9807 3 629.309443 1884.9065 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.932 1 96.932 96.432 97.432 0 0 0 0 0.0078202 1 54764 43.955 34.424 1 2385 1042 1253 1389 3851 3851 HEPVQPSAHHSAEPAEAGK 19 1 0 Unmodified _HEPVQPSAHHSAEPAEAGK_ 0 0 0 0 I6LM39;D6QZ43;A0A087X1U4;C6KG44;E1B2J3;E9LUH3;D9ZNA4;D3YJ43;D0UU70;A8K079;A0A140VKC4;E9LUH4;P51608;A0A087WVW7;C6KG45;A0A075BPH5;A0A0D9SFX7;D5L9I4;B5MCB4;A0A0S2Z3U3;A0A0S2Z401 I6LM39 I6LM39 MECP2 Methyl-CpG-binding protein 2 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 495.7405 4 495.489602 1977.9293 86343.84 0.52126 0.00025828 -0.18451 -9.1423E-05 0.33675 0.00016686 495.740207890864 497.743789428962 80.433 1.5558 80.433 79.707 81.263 7.6294E-06 433 141 5 0 0 0 0.0024823 1 42333 36.111 36.111 1 0.50811 0.63257 0 75242000 49080000 26162000 2386 272 1254 1390 3852 3852 HEPVQPSAHHSAEPAEAGK 19 1 0 Phospho (STY) _HEPVQPSAHHS(ph)AEPAEAGK_ HEPVQPSAHHS(1)AEPAEAGK HEPVQPS(-35.69)AHHS(35.69)AEPAEAGK 0 0 1 0 I6LM39;D6QZ43;A0A087X1U4;C6KG44;E1B2J3;E9LUH3;D9ZNA4;D3YJ43;D0UU70;A8K079;A0A140VKC4;E9LUH4;P51608;A0A087WVW7;C6KG45;A0A075BPH5;A0A0D9SFX7;D5L9I4;B5MCB4;A0A0S2Z3U3;A0A0S2Z401 I6LM39 I6LM39 MECP2 Methyl-CpG-binding protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 687.3076 3 686.972487 2057.89563 72911.22 0.78501 0.00053928 0.061445 4.2211E-05 0.84646 0.00058149 687.306790320905 689.978231803842 16.161 0.46388 16.161 15.898 16.362 0 73 17 10 0 0 0 2.8314E-22 1 3538 104.26 96.171 2 0.095329 0.062788 0 59081000 54239000 4842300 2387 272 1254 1391 3853 3853 432 HEYELNSTPDKK 12 2 0 Phospho (STY) _HEYELNS(ph)TPDKK_ HEY(0.001)ELNS(0.612)T(0.387)PDKK HEY(-29.09)ELNS(2)T(-2)PDKK 0 0 1 1 Q9UK61;A0A024R363;A0A087X0F1 Q9UK61 Q9UK61 FAM208A;C3orf63 Protein FAM208A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 778.853 2 770.837603 1539.66065 71526.13 0.82941 0.00063934 0.71908 0.00055429 1.5485 0.0011936 770.838119154547 778.852496089737 20.121 0.36436 20.121 19.973 20.337 0 56 18 6 0 0 0 0.0037521 2 7029 52.463 52.395 3 1.147 0.93762 0 14089000 6022900 8065700 2388 1234 1255 1392 3854;3855 3854 2520 HFEELETIMDR 11 0 1 Oxidation (M) _HFEELETIM(ox)DR_ HFEELETIM(1)DR HFEELETIM(63.08)DR 0 1 0 0 Q58EY4;Q92922;B4DYQ1;B4DYF9;B4DF22;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2 Q58EY4;B4DF22 Q58EY4 SMARCC1;SMARCC2 SWI/SNF complex subunit SMARCC1;SWI/SNF complex subunit SMARCC2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 723.3343 2 718.329741 1434.64493 73878.86 0.74513 0.00053525 0.26553 0.00019074 1.0107 0.00072599 718.329452718654 723.334024299104 106.64 0.70082 106.64 106.19 106.89 0 126 50 5 0 0 0 0.016278 1 61976 63.076 42.772 1 0.94785 1.1114 0 13491000 7443100 6047900 2389 1092;190 1256 1393 3856 3856 47 HFELGGDK 8 1 0 Unmodified _HFELGGDK_ 0 0 0 0 B2R4V2;H0Y5B4;H7BZ11;J3KQN4;Q969Q0;P83881;R4GN19 B2R4V2 B2R4V2 RPL36A;RPL36A-HNRNPH2;RPL36AL 60S ribosomal protein L36a-like;60S ribosomal protein L36a MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 455.7294 2 451.721967 901.429381 88885.78 0.24542 0.00011086 0.11798 5.3292E-05 0.36339 0.00016415 451.721988116714 455.728977884892 89.331 4.6883 89.331 86.358 91.046 0 1847 425 6 0 0 0 4.1529E-25 9 49795 163.9 101.18 1 0.7366 0.91043 0 414880000 237920000 176960000 2390 530 1257 1394 3857;3858;3859;3860;3861;3862;3863;3864;3865 3865 HFELGGDK 8 1 0 Unmodified _HFELGGDK_ 0 0 0 0 B2R4V2;H0Y5B4;H7BZ11;J3KQN4;Q969Q0;P83881;R4GN19 B2R4V2 B2R4V2 RPL36A;RPL36A-HNRNPH2;RPL36AL 60S ribosomal protein L36a-like;60S ribosomal protein L36a MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 455.7295 2 451.721967 901.429381 88885.8 0.82771 0.00037389 0.27186 0.00012281 1.0996 0.0004967 451.722019155965 455.729073950997 91.14 0.22974 91.14 91.046 91.276 0 108 19 6 0 0 0 3.0134E-10 1 50368 139.97 87.287 1 0.73856 0.91419 0 211640000 122730000 88908000 2391 530 1257 1394 3866 3866 HFELGGDK 8 1 0 Unmodified _HFELGGDK_ 0 0 0 0 B2R4V2;H0Y5B4;H7BZ11;J3KQN4;Q969Q0;P83881;R4GN19 B2R4V2 B2R4V2 RPL36A;RPL36A-HNRNPH2;RPL36AL 60S ribosomal protein L36a-like;60S ribosomal protein L36a MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 451.7218 2 451.721967 901.429381 89199.55 0.17581 7.9415E-05 -0.45559 -0.0002058 -0.27979 -0.00012639 451.721665223467 455.728725895432 91.754 0.16748 91.754 91.65 91.818 0 69 12 7 0 0 0 0.0082938 1 50768 117.4 47.966 1 0.7396 0.91554 0 205440000 115850000 89584000 2392 530 1257 1394 3867 3867 HFELGGDK 8 1 0 Unmodified _HFELGGDK_ 0 0 0 0 B2R4V2;H0Y5B4;H7BZ11;J3KQN4;Q969Q0;P83881;R4GN19 B2R4V2 B2R4V2 RPL36A;RPL36A-HNRNPH2;RPL36AL 60S ribosomal protein L36a-like;60S ribosomal protein L36a MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 451.7217 2 451.721967 901.429381 88885.77 -0.1112 -5.023E-05 0.041636 1.8808E-05 -0.069562 -3.1423E-05 451.721923171037 455.728933360566 92.152 1.3725 92.152 91.795 93.168 0 574 121 8 0 0 0 0.0068757 3 51354 108.46 63.85 1 0.72912 0.90152 0 349510000 204320000 145190000 2393 530 1257 1394 3868;3869;3870 3869 HFELGGDK 8 1 0 Unmodified _HFELGGDK_ 0 0 0 0 B2R4V2;H0Y5B4;H7BZ11;J3KQN4;Q969Q0;P83881;R4GN19 B2R4V2 B2R4V2 RPL36A;RPL36A-HNRNPH2;RPL36AL 60S ribosomal protein L36a-like;60S ribosomal protein L36a ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 451.7224 2 451.721967 901.429381 NaN NaN NaN 0.23566 0.00010645 NaN NaN NaN NaN 90.555 0.54149 90.555 90.505 91.046 0 0 0 0 5.4769E-23 1 50171 116.37 58.908 1 NaN NaN 0 194090000 194090000 0 2394 530 1257 1394 3871 3871 HFELGGDK 8 1 0 Unmodified _HFELGGDK_ 0 0 0 0 B2R4V2;H0Y5B4;H7BZ11;J3KQN4;Q969Q0;P83881;R4GN19 B2R4V2 B2R4V2 RPL36A;RPL36A-HNRNPH2;RPL36AL 60S ribosomal protein L36a-like;60S ribosomal protein L36a MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 451.722 2 451.721967 901.429381 NaN NaN NaN NaN NaN NaN NaN NaN NaN 147.26 1 147.26 146.76 147.76 0 0 0 0 0.021152 1 84875 62.659 27.766 1 2395 530 1257 1394 3872 3872 HFELGGDK 8 1 0 Unmodified _HFELGGDK_ 0 0 0 0 B2R4V2;H0Y5B4;H7BZ11;J3KQN4;Q969Q0;P83881;R4GN19 B2R4V2 B2R4V2 RPL36A;RPL36A-HNRNPH2;RPL36AL 60S ribosomal protein L36a-like;60S ribosomal protein L36a MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 455.7292 2 451.721967 901.429381 88332.98 0.39237 0.00017724 -0.098331 -4.4418E-05 0.29404 0.00013282 451.721902200602 455.728901456115 26.06 1.4162 26.06 25.849 27.265 0 299 78 8 0 0 0 1.8176E-34 2 12129 167.24 89.494 1 1.2725 0.85044 0 176890000 78384000 98505000 2396 530 1257 1394 3873;3874 3874 HFELGGDKK 9 2 0 Unmodified _HFELGGDKK_ 0 0 0 1 B2R4V2;H0Y5B4;H7BZ11;J3KQN4;Q969Q0;P83881;R4GN19 B2R4V2 B2R4V2 RPL36A;RPL36A-HNRNPH2;RPL36AL 60S ribosomal protein L36a-like;60S ribosomal protein L36a MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 344.1822 3 344.182058 1029.52434 101813.4 0.035304 1.2151E-05 -0.037278 -1.283E-05 -0.0019742 -6.7948E-07 344.182039145225 349.524862228105 104.83 1.9412 104.83 103.76 105.7 -7.6294E-06 306 132 3 0 0 0 0.012477 2 61075 37.191 23.238 1 0.84944 1.0076 0 25366000 13060000 12306000 2397 530 1258 1395 3875;3876 3876 HFELGGDKK 9 2 0 Unmodified _HFELGGDKK_ 0 0 0 1 B2R4V2;H0Y5B4;H7BZ11;J3KQN4;Q969Q0;P83881;R4GN19 B2R4V2 B2R4V2 RPL36A;RPL36A-HNRNPH2;RPL36AL 60S ribosomal protein L36a-like;60S ribosomal protein L36a MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 349.5248 3 344.182058 1029.52434 100238.9 -0.10819 -3.7236E-05 0.003126 1.0759E-06 -0.10506 -3.616E-05 344.182081469613 349.524800657753 109.39 4.9122 109.39 106.24 111.15 0 1977 392 8 0 0 0 0.0022567 12 62372 63.216 50.179 1 0.72552 0.97829 0 625340000 350330000 275010000 2398 530 1258 1395 3877;3878;3879;3880;3881;3882;3883;3884;3885;3886;3887;3888 3878 HFELGGDKK 9 2 0 Unmodified _HFELGGDKK_ 0 0 0 1 B2R4V2;H0Y5B4;H7BZ11;J3KQN4;Q969Q0;P83881;R4GN19 B2R4V2 B2R4V2 RPL36A;RPL36A-HNRNPH2;RPL36AL 60S ribosomal protein L36a-like;60S ribosomal protein L36a MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 523.7838 2 515.769448 1029.52434 84048.97 0.40986 0.0002114 0.0074529 3.844E-06 0.41732 0.00021524 515.769428844167 523.783485662222 108.73 3.3998 108.73 107.31 110.71 0 663 268 4 0 0 0 2.6286E-20 5 63696 166.16 135.55 1 0.68171 0.86648 0 76513000 40178000 36334000 2399 530 1258 1395 3889;3890;3891;3892;3893 3890 HFELGGDKK 9 2 0 Unmodified _HFELGGDKK_ 0 0 0 1 B2R4V2;H0Y5B4;H7BZ11;J3KQN4;Q969Q0;P83881;R4GN19 B2R4V2 B2R4V2 RPL36A;RPL36A-HNRNPH2;RPL36AL 60S ribosomal protein L36a-like;60S ribosomal protein L36a ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 515.772 2 515.769448 1029.52434 NaN NaN NaN 0.040971 2.1131E-05 NaN NaN NaN NaN 108.24 1.5078 108.24 106.93 108.44 0 0 0 0 3.4759E-85 3 63561 195.06 149.67 1 NaN NaN 0 43820000 43820000 0 2400 530 1258 1395 3894;3895;3896 3896 HFELGGDKK 9 2 0 Unmodified _HFELGGDKK_ 0 0 0 1 B2R4V2;H0Y5B4;H7BZ11;J3KQN4;Q969Q0;P83881;R4GN19 B2R4V2 B2R4V2 RPL36A;RPL36A-HNRNPH2;RPL36AL 60S ribosomal protein L36a-like;60S ribosomal protein L36a MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 523.7841 2 515.769448 1029.52434 NaN NaN NaN NaN NaN NaN NaN NaN NaN 107.04 1 107.04 106.54 107.54 -7.6294E-06 0 0 0 0.029737 1 62396 53.968 29.074 1 2401 530 1258 1395 3897 3897 HFELGGDKK 9 2 0 Unmodified _HFELGGDKK_ 0 0 0 1 B2R4V2;H0Y5B4;H7BZ11;J3KQN4;Q969Q0;P83881;R4GN19 B2R4V2 B2R4V2 RPL36A;RPL36A-HNRNPH2;RPL36AL 60S ribosomal protein L36a-like;60S ribosomal protein L36a MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 344.1819 3 344.182058 1029.52434 100151.7 0.13115 4.5138E-05 -0.40044 -0.00013782 -0.26929 -9.2686E-05 344.181837111019 349.524675474577 19.082 0.37107 19.082 18.941 19.312 1.9073E-06 72 14 8 0 0 0 0.009793 2 6114 40.994 36.087 1 1.349 1.0595 0 35554000 15033000 20520000 2402 530 1258 1395 3898;3899 3899 HFELGGDKK 9 2 0 Unmodified _HFELGGDKK_ 0 0 0 1 B2R4V2;H0Y5B4;H7BZ11;J3KQN4;Q969Q0;P83881;R4GN19 B2R4V2 B2R4V2 RPL36A;RPL36A-HNRNPH2;RPL36AL 60S ribosomal protein L36a-like;60S ribosomal protein L36a MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 523.7838 2 515.769448 1029.52434 83352.48 0.50435 0.00026013 -0.081023 -4.1789E-05 0.42333 0.00021834 515.769410334712 523.783538095548 19.069 0.34565 19.069 18.941 19.287 0 50 13 6 0 0 0 0.00016651 1 6113 128.38 102.49 1 1.289 1.067 0 17796000 7768600 10027000 2403 530 1258 1395 3900 3900 HFFLQGEK 8 1 0 Unmodified _HFFLQGEK_ 0 0 0 0 A8K0P8;Q68CQ4;B3KVX2 A8K0P8 A8K0P8 DIEXF Digestive organ expansion factor homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 507.7702 2 503.261259 1004.50797 88640.1 0.40955 0.00020611 0.38158 0.00019204 0.79114 0.00039815 503.261225556267 507.268589475008 109.51 0.22263 109.51 109.37 109.6 0 49 16 5 0 0 0 0.019281 2 64430 86.794 68.011 1 0.82053 0.97647 0 11944000 6134000 5810200 2404 442 1259 1396 3901;3902 3901 HFNAPSHIR 9 0 1 Unmodified _HFNAPSHIR_ 0 0 0 0 J3QRI7;J3QQQ9;J3QQV1;J3QRC4;Q6IBH6;P61254;J3KTJ8;A0A024RBF6;J3KSS0 J3QRI7 J3QRI7 RPL26;hCG_26523 60S ribosomal protein L26 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 363.5262 3 360.189547 1077.54681 98586.48 0.14547 5.2397E-05 0.52566 0.00018934 0.67113 0.00024174 360.189636179978 363.525782491139 103.49 1.5972 103.49 102.63 104.23 7.6294E-06 266 114 4 0 0 0 2.3931E-05 1 59638 96.331 77.088 1 0.81168 0.99126 0 21596000 11780000 9816600 2405 896 1260 1397 3903 3903 HFNAPSHIR 9 0 1 Unmodified _HFNAPSHIR_ 0 0 0 0 J3QRI7;J3QQQ9;J3QQV1;J3QRC4;Q6IBH6;P61254;J3KTJ8;A0A024RBF6;J3KSS0 J3QRI7 J3QRI7 RPL26;hCG_26523 60S ribosomal protein L26 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 360.1896 3 360.189547 1077.54681 98586.42 0.13535 4.8752E-05 -0.040129 -1.4454E-05 0.095223 3.4298E-05 360.189472271668 363.525565227727 104.95 2.9163 104.95 103.78 106.69 0 588 202 4 0 0 0 2.863E-09 8 60950 129.38 107.79 1 0.77215 0.96294 0 38147000 21993000 16154000 2406 896 1260 1397 3904;3905;3906;3907;3908;3909;3910;3911 3907 HFNAPSHIR 9 0 1 Unmodified _HFNAPSHIR_ 0 0 0 0 J3QRI7;J3QQQ9;J3QQV1;J3QRC4;Q6IBH6;P61254;J3KTJ8;A0A024RBF6;J3KSS0 J3QRI7 J3QRI7 RPL26;hCG_26523 60S ribosomal protein L26 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 363.5257 3 360.189547 1077.54681 98586.41 -0.068214 -2.457E-05 -0.2283 -8.2232E-05 -0.29652 -0.0001068 360.189537739785 363.525265506616 106.86 0.99535 106.86 106.66 107.66 0 198 78 4 0 0 0 0.0004545 2 62407 74.92 59.291 1 0.97569 1.1908 0 21448000 10482000 10966000 2407 896 1260 1397 3912;3913 3913 HFNAPSHIR 9 0 1 Unmodified _HFNAPSHIR_ 0 0 0 0 J3QRI7;J3QQQ9;J3QQV1;J3QRC4;Q6IBH6;P61254;J3KTJ8;A0A024RBF6;J3KSS0 J3QRI7 J3QRI7 RPL26;hCG_26523 60S ribosomal protein L26 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 360.1895 3 360.189547 1077.54681 NaN NaN NaN -0.071571 -2.5779E-05 NaN NaN NaN NaN 107.75 0.5303 107.75 107.35 107.88 7.6294E-06 0 0 0 9.0165E-10 1 62706 96.331 66.858 1 NaN NaN 0 7963600 7963600 0 2408 896 1260 1397 3914 3914 HFNAPSHIR 9 0 1 Unmodified _HFNAPSHIR_ 0 0 0 0 J3QRI7;J3QQQ9;J3QQV1;J3QRC4;Q6IBH6;P61254;J3KTJ8;A0A024RBF6;J3KSS0 J3QRI7 J3QRI7 RPL26;hCG_26523 60S ribosomal protein L26 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 360.1897 3 360.189547 1077.54681 NaN NaN NaN NaN NaN NaN NaN NaN NaN 102.82 1 102.82 102.32 103.32 0 0 0 0 0.010075 1 59303 66.962 50.124 1 2409 896 1260 1397 3915 3915 HFNAPSHIR 9 0 1 Unmodified _HFNAPSHIR_ 0 0 0 0 J3QRI7;J3QQQ9;J3QQV1;J3QRC4;Q6IBH6;P61254;J3KTJ8;A0A024RBF6;J3KSS0 J3QRI7 J3QRI7 RPL26;hCG_26523 60S ribosomal protein L26 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 363.5252 3 360.189547 1077.54681 NaN NaN NaN NaN NaN NaN NaN NaN NaN 107.82 1 107.82 107.32 108.32 0 0 0 0 0.00057923 1 63050 85.676 70.415 1 2410 896 1260 1397 3916 3916 HFNAPSHIR 9 0 1 Unmodified _HFNAPSHIR_ 0 0 0 0 J3QRI7;J3QQQ9;J3QQV1;J3QRC4;Q6IBH6;P61254;J3KTJ8;A0A024RBF6;J3KSS0 J3QRI7 J3QRI7 RPL26;hCG_26523 60S ribosomal protein L26 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 363.5258 3 360.189547 1077.54681 NaN NaN NaN NaN NaN NaN NaN NaN NaN 107.99 1 107.99 107.49 108.49 0 0 0 0 0.005837 1 63187 74.464 61.888 1 2411 896 1260 1397 3917 3917 HFNAPSHIR 9 0 1 Unmodified _HFNAPSHIR_ 0 0 0 0 J3QRI7;J3QQQ9;J3QQV1;J3QRC4;Q6IBH6;P61254;J3KTJ8;A0A024RBF6;J3KSS0 J3QRI7 J3QRI7 RPL26;hCG_26523 60S ribosomal protein L26 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 363.8601 3 360.189547 1077.54681 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.39 1 108.39 107.89 108.89 0 0 0 0 0.016556 1 63531 56.258 45.037 1 2412 896 1260 1397 3918 3918 HFNAPSHVR 9 0 1 Unmodified _HFNAPSHVR_ 0 0 0 0 E5RIT6;Q9UNX3;E5RHH1 E5RIT6 E5RIT6 RPL26L1 60S ribosomal protein L26-like 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 355.5177 3 355.517663 1063.53116 103142 0.044986 1.5993E-05 -0.10577 -3.7605E-05 -0.060789 -2.1611E-05 355.517594013254 358.853695109298 95.028 1.1555 95.028 94.329 95.485 0 198 92 4 0 0 0 2.9932E-05 1 53444 93.649 76.873 1 0.70374 0.86576 0 24560000 12488000 12072000 2413 786 1261 1398 3919 3919 HFNAPSHVR 9 0 1 Unmodified _HFNAPSHVR_ 0 0 0 0 E5RIT6;Q9UNX3;E5RHH1 E5RIT6 E5RIT6 RPL26L1 60S ribosomal protein L26-like 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 355.5179 3 355.517663 1063.53116 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.44 1 94.44 93.94 94.94 0 0 0 0 0.011294 1 52857 64.711 49.561 1 2414 786 1261 1398 3920 3920 HFNAPSHVR 9 0 1 Unmodified _HFNAPSHVR_ 0 0 0 0 E5RIT6;Q9UNX3;E5RHH1 E5RIT6 E5RIT6 RPL26L1 60S ribosomal protein L26-like 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 358.8539 3 355.517663 1063.53116 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.793 1 94.793 94.293 95.293 0 0 0 0 0.00068586 1 53135 84.213 62.912 1 2415 786 1261 1398 3921 3921 HFSTEDGIFQGQR 13 0 1 Unmodified _HFSTEDGIFQGQR_ 0 0 0 0 E9PS41;Q6RFH5;B4E018 E9PS41 E9PS41 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 511.2437 3 507.907545 1520.7008 85445.64 0.36962 0.00018773 -0.52524 -0.00026677 -0.15562 -7.904E-05 507.90731717833 511.243319964948 107.35 0.78786 107.35 106.93 107.72 0 188 63 5 0 0 0 0.00024862 1 62578 75.819 54.76 1 1.2287 1.5119 0 23605000 8922400 14682000 2416 816 1262 1399 3922 3922 HFSTEDGIFQGQR 13 0 1 Unmodified _HFSTEDGIFQGQR_ 0 0 0 0 E9PS41;Q6RFH5;B4E018 E9PS41 E9PS41 WDR74 WD repeat-containing protein 74 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 766.8621 2 761.357679 1520.7008 70246.2 0.89443 0.00068098 -0.103 -7.8423E-05 0.79142 0.00060256 761.358023787702 766.361830521922 107.41 0.57019 107.41 107.04 107.61 0 119 45 4 0 0 0 0.0028113 1 62570 75.294 57.43 1 0.95488 1.1391 0 16294000 7820800 8473400 2417 816 1262 1399 3923 3923 HFSVEGQLEFR 11 0 1 Unmodified _HFSVEGQLEFR_ 0 0 0 0 A0A024RD80;P08238;B4DMA2;B4DGL0;Q6PK50;Q58FF7;Q14568;Q58FG1;Q2VPJ6;K9JA46;P07900;Q8TBA7;Q86U12;O75322;Q96HX7 A0A024RD80;Q2VPJ6 A0A024RD80 HSP90AB1;HSP90AB3P;HSP90AA2P;HSP90AA4P;HSP90AA1;EL52 Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Heat shock protein HSP 90-alpha A2;Putative heat shock protein HSP 90-alpha A4;Heat shock protein HSP 90-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 679.8408 2 674.835851 1347.65715 74601.85 0.4994 0.00033701 0.95827 0.00064668 1.4577 0.00098369 674.836213737281 679.840351238967 146.62 0.30396 146.62 146.53 146.83 -1.5259E-05 56 29 4 0 0 0 0.018378 1 84575 66.435 25.447 1 2.0904 2.2708 0 3856700 1506600 2350000 2418 223;906 1263 1400 3924 3924 HFSVEGQLEFR 11 0 1 Unmodified _HFSVEGQLEFR_ 0 0 0 0 A0A024RD80;P08238;B4DMA2;B4DGL0;Q6PK50;Q58FF7;Q14568;Q58FG1;Q2VPJ6;K9JA46;P07900;Q8TBA7;Q86U12;O75322;Q96HX7 A0A024RD80;Q2VPJ6 A0A024RD80 HSP90AB1;HSP90AB3P;HSP90AA2P;HSP90AA4P;HSP90AA1;EL52 Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Heat shock protein HSP 90-alpha A2;Putative heat shock protein HSP 90-alpha A4;Heat shock protein HSP 90-alpha ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 679.8398 2 674.835851 1347.65715 NaN NaN NaN 0.32779 0.00022121 NaN NaN NaN NaN 147.44 1.0081 147.44 147.09 148.1 0 0 0 0 0.0064099 1 84940 64.04 30.244 1 NaN NaN 0 1753100 0 1753100 2419 223;906 1263 1400 3925 3925 HFSVEGQLEFR 11 0 1 Unmodified _HFSVEGQLEFR_ 0 0 0 0 A0A024RD80;P08238;B4DMA2;B4DGL0;Q6PK50;Q58FF7;Q14568;Q58FG1;Q2VPJ6;K9JA46;P07900;Q8TBA7;Q86U12;O75322;Q96HX7 A0A024RD80;Q2VPJ6 A0A024RD80 HSP90AB1;HSP90AB3P;HSP90AA2P;HSP90AA4P;HSP90AA1;EL52 Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Heat shock protein HSP 90-alpha A2;Putative heat shock protein HSP 90-alpha A4;Heat shock protein HSP 90-alpha MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 674.8359 2 674.835851 1347.65715 NaN NaN NaN NaN NaN NaN NaN NaN NaN 147.5 1 147.5 147 148 0 0 0 0 0.0049439 1 85004 55.567 24.997 1 2420 223;906 1263 1400 3926 3926 HFTEDIQTR 9 0 1 Unmodified _HFTEDIQTR_ 0 0 0 0 A0A024RCU9;A8K8B2;H3BLV9;Q96SB4;H7C2I2;H7C521;H7C5L6;A8MPP7;A8MPY5;E7ETV6;A0A024R704;Q59GF4;Q9UPE1;P78362 A0A024RCU9 A0A024RCU9 SRPK1;SRPK3;SRPK2 SRSF protein kinase 1;SRSF protein kinase 3;SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 578.785 2 573.780544 1145.54654 NaN NaN NaN 0.019453 1.1162E-05 NaN NaN NaN NaN 80.555 1.053 80.555 80.049 81.102 7.6294E-06 0 0 0 0.00023671 1 43022 79.474 40.452 1 NaN NaN 0 19168000 0 19168000 2421 218 1264 1401 3927 3927 HFVLDECDK 9 1 0 Unmodified _HFVLDECDK_ 0 0 0 0 K7EPJ3;K7EQN7;A0A024R7H0;B4DX78;O00148;A0A0D9SEM9 K7EPJ3 K7EPJ3 DDX39A;DDX39 ATP-dependent RNA helicase DDX39A ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 581.7645 2 581.763506 1161.51246 NaN NaN NaN 0.83122 0.00048357 NaN NaN NaN NaN 95.338 0.32021 95.338 95.092 95.412 -7.6294E-06 0 0 0 3.2243E-10 1 53445 96.948 74.456 1 NaN NaN 0 10760000 10760000 0 2422 134 1265 1402 3928 3928 HFVLDECDK 9 1 0 Unmodified _HFVLDECDK_ 0 0 0 0 K7EPJ3;K7EQN7;A0A024R7H0;B4DX78;O00148;A0A0D9SEM9 K7EPJ3 K7EPJ3 DDX39A;DDX39 ATP-dependent RNA helicase DDX39A MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 585.7708 2 581.763506 1161.51246 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.13 1 95.13 94.63 95.63 0 0 0 0 5.307E-05 1 53396 109.71 85.559 1 2423 134 1265 1402 3929 3929 HGATHVFASK 10 1 0 Unmodified _HGATHVFASK_ 0 0 0 0 B7ZAX9;B4DZC0;O60264;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;D7EZH4 B7ZAX9 B7ZAX9 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 352.1855 3 352.185802 1053.53558 100298.6 0.62083 0.00021865 0.066455 2.3404E-05 0.68728 0.00024205 352.185809332852 354.857151728163 100.29 3.7188 100.29 97.746 101.46 -7.6294E-06 907 302 5 0 0 0 0.00018059 8 57726 86.882 76.971 1 2.5909 3.2114 0 127000000 36300000 90699000 2424 672 1266 1403 3930;3931;3932;3933;3934;3935;3936;3937 3936 HGATHVFASK 10 1 0 Unmodified _HGATHVFASK_ 0 0 0 0 B7ZAX9;B4DZC0;O60264;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;D7EZH4 B7ZAX9 B7ZAX9 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 531.782 2 527.775065 1053.53558 84321.15 0.55486 0.00029284 -1.4319 -0.0007557 -0.87699 -0.00046285 527.774275584507 532.28247790907 98.3 0.15302 98.3 98.213 98.366 0 34 13 4 0 0 0 0.03147 1 55824 53.756 37.216 1 2.7607 3.2732 0 6635500 1929200 4706300 2425 672 1266 1403 3938 3938 HGATHVFASK 10 1 0 Unmodified _HGATHVFASK_ 0 0 0 0 B7ZAX9;B4DZC0;O60264;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;D7EZH4 B7ZAX9 B7ZAX9 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 531.7825 2 527.775065 1053.53558 84934.56 1.3376 0.00070595 -0.10992 -5.8015E-05 1.2277 0.00064794 527.775007312781 531.78202443421 100.17 3.0036 100.17 98.345 101.35 7.6294E-06 526 241 4 0 0 0 4.8773E-96 4 57014 213.53 170.66 1 2.5347 3.2031 0 31247000 9093300 22154000 2426 672 1266 1403 3939;3940;3941;3942 3941 HGATHVFASK 10 1 0 Unmodified _HGATHVFASK_ 0 0 0 0 B7ZAX9;B4DZC0;O60264;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;D7EZH4 B7ZAX9 B7ZAX9 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 354.8576 3 352.185802 1053.53558 101465.4 0.53871 0.00018973 -0.75408 -0.00026558 -0.21536 -7.5848E-05 352.185522455734 354.856944008292 101.49 0.61781 101.49 101.33 101.94 -7.6294E-06 166 53 5 0 0 0 0.0030844 2 58630 48.602 41.23 1 2.9569 3.6831 0 25534000 4993700 20540000 2427 672 1266 1403 3943;3944 3944 HGATHVFASK 10 1 0 Unmodified _HGATHVFASK_ 0 0 0 0 B7ZAX9;B4DZC0;O60264;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;D7EZH4 B7ZAX9 B7ZAX9 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 354.857 3 352.185802 1053.53558 101957.2 0.51127 0.00018006 -0.29576 -0.00010416 0.2155 7.5898E-05 352.185781964257 354.856987164144 102.59 1.1119 102.59 101.84 102.95 0 227 85 4 0 0 0 0.0025411 1 59171 60.064 56.171 1 2.6293 3.1295 0 11990000 3133000 8856600 2428 672 1266 1403 3945 3945 HGATHVFASK 10 1 0 Unmodified _HGATHVFASK_ 0 0 0 0 B7ZAX9;B4DZC0;O60264;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;D7EZH4 B7ZAX9 B7ZAX9 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 352.1858 3 352.185802 1053.53558 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.167 1 99.167 98.667 99.667 0 0 0 0 0.0015454 1 56490 61.765 46.123 1 2429 672 1266 1403 3946 3946 HGDEIITSTTSNYETQTFSSK 21 1 0 Unmodified _HGDEIITSTTSNYETQTFSSK_ 0 0 0 0 Q6P2Q9;Q53GM6;B4DK16 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 785.7026 3 782.695914 2345.06591 68723.13 1.0815 0.00084646 0.57974 0.00045376 1.6612 0.0013002 783.03059242775 785.368936942018 103.27 1.1065 103.27 102.73 103.84 0 381 79 8 0 0 0 2.0503E-09 1 59726 60.932 52.113 1 0.92014 1.1608 0 30387000 17176000 13211000 2430 1121 1267 1404 3947 3947 HGDLPDIQIK 10 1 0 Unmodified _HGDLPDIQIK_ 0 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 572.3157 2 568.308938 1134.60332 82941.2 0.48535 0.00027583 -0.20877 -0.00011865 0.27657 0.00015718 568.308688496959 572.315848790491 111.78 0.73205 111.78 111.46 112.2 0 170 62 5 0 0 0 0.030907 1 66095 54.191 38.529 1 0.78067 0.95937 0 22155000 12767000 9388200 2431 1027 1268 1405 3948 3948 HGDVITIIDR 10 0 1 Unmodified _HGDVITIIDR_ 0 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 574.8187 2 569.814387 1137.61422 81558.29 0.56195 0.00032021 -0.051228 -2.9191E-05 0.51072 0.00029102 569.814264183321 574.818435810168 119.39 2.1848 119.39 118.14 120.32 0 476 195 5 0 0 0 3.7174E-06 2 71927 118.18 101.4 1 1.766 2.2111 0 40422000 15152000 25270000 2432 994 1269 1406 3949;3950 3950 HGDVITIIDR 10 0 1 Unmodified _HGDVITIIDR_ 0 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 574.8188 2 569.814387 1137.61422 81558.3 0.49835 0.00028397 0.0060544 3.4499E-06 0.5044 0.00028742 569.81426687805 574.818490110933 120.66 1.643 120.66 120 121.64 0 381 138 5 0 0 0 1.4214E-15 2 72484 147.2 119.95 1 1.8193 2.2097 0 20332000 7191700 13140000 2433 994 1269 1406 3951;3952 3951 HGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGK 35 1 0 Phospho (STY) _HGGGGGGGSGPSAGSGGGGFGGSAAVAAATAS(ph)GGK_ HGGGGGGGSGPSAGSGGGGFGGSAAVAAAT(0.137)AS(0.862)GGK HGGGGGGGS(-54.8)GPS(-52.66)AGS(-48.4)GGGGFGGS(-38.92)AAVAAAT(-7.98)AS(7.98)GGK 0 0 1 0 J3QQW9;A8K1U9;Q15022 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 904.3925 3 904.05823 2709.15286 64722.75 0.8292 0.00074965 0.28513 0.00025778 1.1143 0.0010074 904.392543155763 907.399334467927 78.062 0.97017 78.062 77.492 78.462 -7.6294E-06 266 85 6 0 0 0 1.3184E-18 2 40590 55.258 55.258 6 0.77524 0.98335 0 36916000 18782000 18133000 2434 446 1270 1407 3953;3954 3953 777 HGGSPQPLATTPLSQEPVNPPSEASPTR 28 0 1 Phospho (STY) _HGGSPQPLATTPLSQEPVNPPSEAS(ph)PTR_ HGGSPQPLATTPLSQEPVNPPS(0.236)EAS(0.565)PT(0.198)R HGGS(-44.05)PQPLAT(-42.06)T(-42.26)PLS(-33.02)QEPVNPPS(-3.79)EAS(3.79)PT(-4.55)R 0 0 1 0 A0A140VK53;Q9UQ35;I3L4D8;I3L182;Q9UQ39 A0A140VK53 A0A140VK53 SRRM2 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 978.4682 3 978.132736 2931.37638 61626.08 0.86755 0.00084858 -0.086535 -8.4642E-05 0.78102 0.00076394 978.466910627764 981.803228902221 105.42 0.73972 105.42 105.01 105.75 0 414 50 12 0 0 0 1.9458E-10 1 61041 49.825 49.825 7 0.73783 0.93169 0 105590000 60513000 45075000 2435 383 1271 1408 3955 3955 613 HGLLVPNNTTDQELQHIR 18 0 1 Unmodified _HGLLVPNNTTDQELQHIR_ 0 0 0 0 P56537;B7ZBH1 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 695.7005 3 695.699376 2084.0763 76134.62 0.76568 0.00053269 0.02218 1.543E-05 0.78786 0.00054812 695.699494271641 699.369099026143 131.25 0.55331 131.25 130.85 131.41 0 100 47 6 0 0 0 2.6655E-06 1 79755 58.159 58.159 1 0.6561 0.71539 0 4835700 2965900 1869800 2436 1010 1272 1409 3956 3956 HGLLVPNNTTDQELQHIR 18 0 1 Unmodified _HGLLVPNNTTDQELQHIR_ 0 0 0 0 P56537;B7ZBH1 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 695.6993 3 695.699376 2084.0763 79251.63 0.69115 0.00048083 -0.044699 -3.1097E-05 0.64645 0.00044974 695.699473202714 699.369405610538 131.9 0.22153 131.9 131.81 132.03 0 53 20 5 0 0 0 4.5234E-08 1 80250 75.574 75.574 1 0.57625 0.62838 0 4867800 2672700 2195100 2437 1010 1272 1409 3957 3957 HGLLVPNNTTDQELQHIR 18 0 1 Unmodified _HGLLVPNNTTDQELQHIR_ 0 0 0 0 P56537;B7ZBH1 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 696.0337 3 695.699376 2084.0763 NaN NaN NaN -0.36474 -0.00025375 NaN NaN NaN NaN 129.02 0.32965 129.02 128.84 129.17 0 0 0 0 0.0090918 1 78413 40.962 30.328 1 NaN NaN 0 2473000 2473000 0 2438 1010 1272 1409 3958 3958 HGLLVPNNTTDQELQHIR 18 0 1 Unmodified _HGLLVPNNTTDQELQHIR_ 0 0 0 0 P56537;B7ZBH1 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 695.3754 3 695.699376 2084.0763 75136.04 0.95274 0.00066282 -0.14146 -9.8415E-05 0.81128 0.00056441 696.033743503527 699.369398254201 129.23 0.45827 129.23 128.94 129.4 0 78 39 4 0 0 0 0.00822 1 78532 30.107 30.107 1 0.77445 0.8482 0 6548300 4448900 2099400 2439 1010 1272 1409 3959 3959 HGLQLGAQSPGR 12 0 1 Phospho (STY) _HGLQLGAQS(ph)PGR_ HGLQLGAQS(1)PGR HGLQLGAQS(176.58)PGR 0 0 1 0 Q8N1G0;A6PVV7 Q8N1G0 Q8N1G0 ZNF687 Zinc finger protein 687 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 650.8121 2 650.811526 1299.6085 75063.41 0.7862 0.00051167 -0.12214 -7.9488E-05 0.66406 0.00043218 650.811429561606 655.815553382274 72.41 1.0591 72.41 71.944 73.003 0 275 89 6 0 0 0 1.8436E-65 2 36649 176.58 157.6 1 0.64951 0.81968 0 75661000 42832000 32829000 2440 1150 1273 1410 3960;3961 3961 2217 HGLTSGSASPPPPALPLYPDPVR 23 0 1 Phospho (STY) _HGLTSGSAS(ph)PPPPALPLYPDPVR_ HGLT(0.116)S(0.116)GS(0.129)AS(0.639)PPPPALPLYPDPVR HGLT(-7.4)S(-7.4)GS(-6.96)AS(6.96)PPPPALPLY(-54.83)PDPVR 0 0 1 0 H0YM74;Q92610 H0YM74 H0YM74 ZNF592 Zinc finger protein 592 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 803.0677 3 802.733297 2405.17806 68653.75 0.92604 0.00074336 0.010178 8.1698E-06 0.93622 0.00075153 803.067510963086 806.403707525867 123.76 1.2821 123.76 123.25 124.53 0 711 111 9 0 0 0 6.2637E-13 3 74875 64.315 64.315 5 0.61582 0.75881 0 32038000 18830000 13208000 2441 863 1274 1411 3962;3963;3964 3962 1471 HGLYLPTR 8 0 1 Unmodified _HGLYLPTR_ 0 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 483.7732 2 478.769252 955.52395 91608.62 0.31886 0.00015266 0.36669 0.00017556 0.68555 0.00032822 478.769359931881 483.773441271549 109.44 0.53467 109.44 109.32 109.86 0 88 37 6 0 0 0 0.020559 1 64355 84.097 67.171 1 1.9861 2.4502 0 32602000 10723000 21879000 2442 365 1275 1412 3965 3965 HGRPGIGATHSSR 13 0 2 Unmodified _HGRPGIGATHSSR_ 0 0 0 1 K7EM56;A0A0B4J2B4;S4R417;K7EQJ5;K7ELC2;P62841 K7EM56 K7EM56 RPS15 40S ribosomal protein S15 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 339.5299 4 333.927446 1331.68068 103893.2 -0.42051 -0.00014042 0.28938 9.6631E-05 -0.13113 -4.3788E-05 333.927482556764 338.931601847772 84.926 1.6627 84.926 83.87 85.533 -7.6294E-06 475 154 5 0 0 0 0.022574 1 45370 21.942 18.179 1 1.0319 1.2821 0 62501000 28083000 34418000 2443 312 1276 1413 3966 3966 HGSDPAFAPGPR 12 0 1 Phospho (STY) _HGS(ph)DPAFAPGPR_ HGS(1)DPAFAPGPR HGS(115.92)DPAFAPGPR 0 0 1 0 J3KPS2;Q6ZRV2 J3KPS2 J3KPS2 FAM83H Protein FAM83H MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 644.7773 2 644.777151 1287.53975 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.798 1 66.798 66.298 67.298 0 0 0 0 8.5174E-05 1 32658 115.92 92.802 1 2444 890 1277 1414 3967 3967 1510 HGSDPAFAPGPR 12 0 1 Phospho (STY) _HGS(ph)DPAFAPGPR_ HGS(1)DPAFAPGPR HGS(90.79)DPAFAPGPR 0 0 1 0 J3KPS2;Q6ZRV2 J3KPS2 J3KPS2 FAM83H Protein FAM83H MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 649.782 2 644.777151 1287.53975 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.873 1 66.873 66.373 67.373 0 0 0 0 0.0031467 1 32725 90.793 77.392 1 2445 890 1277 1414 3968 3968 1510 HGSLGFLPR 9 0 1 Phospho (STY) _HGS(ph)LGFLPR_ HGS(1)LGFLPR HGS(88.95)LGFLPR 0 0 1 0 B3KS36;P39023;Q96QL0;H7C3M2;H7C422;B4DN06;F8WCR1 B3KS36 B3KS36 RPL3 60S ribosomal protein L3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 537.2625 2 532.257866 1062.50118 83119.13 0.57306 0.00030502 -0.1832 -9.751E-05 0.38986 0.00020751 532.257728878896 537.261857433485 106.57 1.0057 106.57 105.97 106.98 0 295 74 6 0 0 0 0.00015369 2 61814 88.948 63.054 1 2.1144 2.6225 0 35246000 11066000 24179000 2446 597 1278 1415 3969;3970 3969 979 HGSLGFLPR 9 0 1 Phospho (STY) _HGS(ph)LGFLPR_ HGS(1)LGFLPR HGS(43.3)LGFLPR 0 0 1 0 B3KS36;P39023;Q96QL0;H7C3M2;H7C422;B4DN06;F8WCR1 B3KS36 B3KS36 RPL3 60S ribosomal protein L3 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 532.2581 2 532.257866 1062.50118 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.359 1 93.359 92.859 93.859 0 0 0 0 0.016873 1 60154 43.297 32.829 1 2447 597 1278 1415 3971 3971 979 HGSLGFLPR 9 0 1 Phospho (STY) _HGS(ph)LGFLPR_ HGS(1)LGFLPR HGS(49.47)LGFLPR 0 0 1 0 B3KS36;P39023;Q96QL0;H7C3M2;H7C422;B4DN06;F8WCR1 B3KS36 B3KS36 RPL3 60S ribosomal protein L3 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 537.2625 2 532.257866 1062.50118 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.06 1 94.06 93.56 94.56 0 0 0 0 0.0095302 1 60600 49.466 32.099 1 2448 597 1278 1415 3972 3972 979 HGSLGFLPR 9 0 1 Unmodified _HGSLGFLPR_ 0 0 0 0 B3KS36;P39023;Q96QL0;H7C3M2;H7C422;B4DN06;F8WCR1 B3KS36 B3KS36 RPL3 60S ribosomal protein L3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 497.2784 2 492.274701 982.534849 87359.55 0.57425 0.00028269 0.17255 8.494E-05 0.7468 0.00036763 492.275571918517 497.278547948859 126.22 0.47016 126.22 126.02 126.49 0 150 40 6 0 0 0 0.002032 1 76523 79.469 66.509 1 1.0834 1.2035 0 8849600 3984100 4865500 2449 597 1278 1416 3973 3973 HGSLGFLPR 9 0 1 Unmodified _HGSLGFLPR_ 0 0 0 0 B3KS36;P39023;Q96QL0;H7C3M2;H7C422;B4DN06;F8WCR1 B3KS36 B3KS36 RPL3 60S ribosomal protein L3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 492.275 2 492.274701 982.534849 87067.21 0.57272 0.00028194 -0.11424 -5.6238E-05 0.45848 0.0002257 492.274665100055 497.278591205339 127.7 3.6652 127.7 126.48 130.14 0 1222 327 5 0 0 0 3.154E-09 9 77783 137.18 106.57 1 0.95344 1.2 0 49139000 25409000 23730000 2450 597 1278 1416 3974;3975;3976;3977;3978;3979;3980;3981;3982 3977 HGSLGFLPR 9 0 1 Unmodified _HGSLGFLPR_ 0 0 0 0 B3KS36;P39023;Q96QL0;H7C3M2;H7C422;B4DN06;F8WCR1 B3KS36 B3KS36 RPL3 60S ribosomal protein L3 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 492.2755 2 492.274701 982.534849 NaN NaN NaN NaN NaN NaN NaN NaN NaN 130.39 1 130.39 129.89 130.89 0 0 0 0 0.029541 1 79295 43.246 11.957 1 2451 597 1278 1416 3983 3983 HGSLGFLPR 9 0 1 Unmodified _HGSLGFLPR_ 0 0 0 0 B3KS36;P39023;Q96QL0;H7C3M2;H7C422;B4DN06;F8WCR1 B3KS36 B3KS36 RPL3 60S ribosomal protein L3 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 497.2791 2 492.274701 982.534849 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.132 1 88.132 87.632 88.632 -7.6294E-06 0 0 0 0.022164 1 56737 46.129 20.235 1 2452 597 1278 1416 3984 3984 HGVVPLATYMR 11 0 1 Oxidation (M) _HGVVPLATYM(ox)R_ HGVVPLATYM(1)R HGVVPLATYM(41.7)R 0 1 0 0 G3V1B3;M0R181;Q6IAX2;Q59GK9;P46778 G3V1B3 G3V1B3 RPL21 60S ribosomal protein L21 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 423.8932 3 420.557019 1258.64923 95812.66 0.070158 2.9505E-05 -0.15599 -6.5604E-05 -0.085836 -3.6099E-05 420.556872836298 423.893075752099 106.85 0.57939 106.85 106.37 106.95 7.6294E-06 120 44 5 0 0 0 0.0068752 1 62245 41.704 27.351 1 2.4505 2.9059 0 14997000 2766500 12230000 2453 837 1279 1417 3985 3985 229 HGVVPLATYMR 11 0 1 Oxidation (M) _HGVVPLATYM(ox)R_ HGVVPLATYM(1)R HGVVPLATYM(68.02)R 0 1 0 0 G3V1B3;M0R181;Q6IAX2;Q59GK9;P46778 G3V1B3 G3V1B3 RPL21 60S ribosomal protein L21 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 635.3364 2 630.33189 1258.64923 77566.4 0.71615 0.00045141 0.028839 1.8178E-05 0.74499 0.00046959 630.331772809031 635.336085550262 106.78 1.1287 106.78 106.22 107.35 -7.6294E-06 327 88 5 0 0 0 0.010505 1 62421 68.016 59.058 1 2.0285 2.4947 0 26565000 9291400 17274000 2454 837 1279 1417 3986 3986 229 HHIPVVDR 8 0 1 Unmodified _HHIPVVDR_ 0 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 324.8507 3 324.850643 971.530098 106694.7 -0.39834 -0.0001294 0.27737 9.0102E-05 -0.12098 -3.9299E-05 324.850669745113 328.186797347419 145.59 0.539 145.59 145.27 145.81 0 55 16 6 0 0 0 0.010984 2 83955 45.972 34.461 1 0.93496 1.0175 0 4296700 2358900 1937800 2455 1062 1280 1418 3987;3988 3987 HHIPVVDR 8 0 1 Unmodified _HHIPVVDR_ 0 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 324.8507 3 324.850643 971.530098 106807.3 -0.44807 -0.00014555 0.41095 0.0001335 -0.037118 -1.2058E-05 324.850756462947 328.186804308469 146.69 0.58441 146.69 146.25 146.83 0 163 54 4 0 0 0 0.010233 2 84533 47.574 38.711 1 0.8703 0.93904 0 2558500 1420200 1138300 2456 1062 1280 1418 3989;3990 3989 HHYEQQQEDLAR 12 0 1 Unmodified _HHYEQQQEDLAR_ 0 0 0 0 Q12873;B4DLC6;B3KRD4;Q659F1;K7EMY3;Q659D0;B3KY63;F5GWX5;A0A0C4DGG9;Q14839;Q6ZU36;Q8TDI0 Q12873;B3KY63 B3KY63 CHD3;DKFZp434K213;CHD5;DKFZp434P202;CHD4 Chromodomain-helicase-DNA-binding protein 3;Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 518.5766 3 518.574566 1552.70187 86682.49 0.81497 0.00042262 -0.51901 -0.00026914 0.29596 0.00015348 518.574344234384 521.910345014317 96.172 0.65992 96.172 95.843 96.503 0 184 56 5 0 0 0 0.00046776 1 54010 72.29 64.039 1 0.62873 0.77349 0 24508000 15265000 9243300 2457 324;1045 1281 1419 3991 3991 HHYEQQQEDLAR 12 0 1 Unmodified _HHYEQQQEDLAR_ 0 0 0 0 Q12873;B4DLC6;B3KRD4;Q659F1;K7EMY3;Q659D0;B3KY63;F5GWX5;A0A0C4DGG9;Q14839;Q6ZU36;Q8TDI0 Q12873;B3KY63 B3KY63 CHD3;DKFZp434K213;CHD5;DKFZp434P202;CHD4 Chromodomain-helicase-DNA-binding protein 3;Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 518.5739 3 518.574566 1552.70187 84922.42 0.33009 0.00017118 -0.62113 -0.0003221 -0.29104 -0.00015092 518.574247397607 522.244501066163 98.544 1.0394 98.544 98.012 99.052 7.6294E-06 212 84 5 0 0 0 1.2452E-06 1 56153 88.338 75.505 1 0.67261 0.82743 0 24759000 13780000 10979000 2458 324;1045 1281 1419 3992 3992 HHYEQQQEDLAR 12 0 1 Unmodified _HHYEQQQEDLAR_ 0 0 0 0 Q12873;B4DLC6;B3KRD4;Q659F1;K7EMY3;Q659D0;B3KY63;F5GWX5;A0A0C4DGG9;Q14839;Q6ZU36;Q8TDI0 Q12873;B3KY63 B3KY63 CHD3;DKFZp434K213;CHD5;DKFZp434P202;CHD4 Chromodomain-helicase-DNA-binding protein 3;Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 5 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 518.5751 3 518.574566 1552.70187 NaN NaN NaN 0.92197 0.00047811 NaN NaN NaN NaN 97.97 0.24719 97.97 97.835 98.082 0 0 0 0 0.0098705 1 55559 60.301 52.39 1 NaN NaN 0 7091500 7091500 0 2459 324;1045 1281 1419 3993 3993 HHYEQQQEDLAR 12 0 1 Unmodified _HHYEQQQEDLAR_ 0 0 0 0 Q12873;B4DLC6;B3KRD4;Q659F1;K7EMY3;Q659D0;B3KY63;F5GWX5;A0A0C4DGG9;Q14839;Q6ZU36;Q8TDI0 Q12873;B3KY63 B3KY63 CHD3;DKFZp434K213;CHD5;DKFZp434P202;CHD4 Chromodomain-helicase-DNA-binding protein 3;Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 5 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 518.5754 3 518.574566 1552.70187 NaN NaN NaN 0.027323 1.4169E-05 NaN NaN NaN NaN 99.045 0.54437 99.045 98.966 99.511 -7.6294E-06 0 0 0 0.0085527 2 56389 71.153 58.793 1 NaN NaN 0 12158000 12158000 0 2460 324;1045 1281 1419 3994;3995 3994 HIDFSLR 7 0 1 Unmodified _HIDFSLR_ 0 0 0 0 A0A024R4M0;P46781;A5D904 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 449.2445 2 444.240327 886.466101 89941 0.23748 0.0001055 0.0058132 2.5825E-06 0.24329 0.00010808 444.240343243487 449.244297732249 117.82 6.3489 117.82 114.94 121.28 0 1278 558 4 0 0 0 0.016298 2 70203 101.69 26.38 1 0.8933 1.1248 0 52176000 24618000 27558000 2461 89 1282 1420 3996;3997 3996 HIDFSLR 7 0 1 Unmodified _HIDFSLR_ 0 0 0 0 A0A024R4M0;P46781;A5D904 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 444.2401 2 444.240327 886.466101 NaN NaN NaN 0.012516 5.56E-06 NaN NaN NaN NaN 118.91 1.971 118.91 118.66 120.63 0 0 0 0 0.016149 1 71341 60.294 6.5843 1 NaN NaN 0 26026000 26026000 0 2462 89 1282 1420 3998 3998 HIEIFTDLSSR 11 0 1 Unmodified _HIEIFTDLSSR_ 0 0 0 0 P13010;C9JZ81;Q53TC2 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 659.3442 2 659.343509 1316.67246 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.66 1 129.66 129.16 130.16 0 0 0 0 0.014337 1 78836 56.432 32.277 1 2463 963 1283 1421 3999 3999 HIEIFTDLSSR 11 0 1 Unmodified _HIEIFTDLSSR_ 0 0 0 0 P13010;C9JZ81;Q53TC2 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 659.3445 2 659.343509 1316.67246 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.81 1 129.81 129.31 130.31 0 0 0 0 0.0039849 1 78932 68.735 38.165 1 2464 963 1283 1421 4000 4000 HIELGVTGGGSPENGDGALLAITPPAVK 28 1 0 Phospho (STY) _HIELGVT(ph)GGGSPENGDGALLAITPPAVK_ HIELGVT(0.52)GGGS(0.48)PENGDGALLAITPPAVK HIELGVT(0.35)GGGS(-0.35)PENGDGALLAIT(-31.72)PPAVK 0 0 1 0 A0A0A0MS59;Q6ZRS2;A0A0C4DFX4 A0A0A0MS59 A0A0A0MS59 SRCAP Helicase SRCAP ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 917.7958 3 917.463535 2749.36877 NaN NaN NaN -2.6289 -0.0024119 NaN NaN NaN NaN 132.99 0.60867 132.99 132.67 133.28 0 0 0 0 6.8559E-06 1 80807 45.957 39.381 3 NaN NaN 0 5901200 5901200 0 2465 292 1284 1422 4001 4001 2683 HIKEEPLSEEEPCTSTAIASPEK 23 2 0 2 Phospho (STY) _HIKEEPLS(ph)EEEPCTSTAIAS(ph)PEK_ HIKEEPLS(0.994)EEEPCT(0.012)S(0.026)T(0.02)AIAS(0.949)PEK HIKEEPLS(24.84)EEEPCT(-20.85)S(-15.93)T(-17.19)AIAS(15.93)PEK 0 0 2 1 B3KN82;Q9Y2X3 B3KN82 B3KN82 NOP58 Nucleolar protein 58 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 915.062 3 914.725418 2741.15442 NaN NaN NaN 0.52851 0.00048344 NaN NaN NaN NaN 96.557 1.0639 96.557 95.947 97.011 -7.6294E-06 0 0 0 8.9272E-07 1 54530 49.988 38.884 10 NaN NaN 0 27967000 27967000 0 2466 578 1285 1423 4002 4002 958;959 HIKEEPLSEEEPCTSTAIASPEK 23 2 0 2 Phospho (STY) _HIKEEPLS(ph)EEEPCTSTAIAS(ph)PEK_ HIKEEPLS(0.996)EEEPCT(0.105)S(0.263)T(0.209)AIAS(0.427)PEK HIKEEPLS(24.83)EEEPCT(-6.21)S(-2.12)T(-3.11)AIAS(2.12)PEK 0 0 2 1 B3KN82;Q9Y2X3 B3KN82 B3KN82 NOP58 Nucleolar protein 58 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 920.0696 3 914.725418 2741.15442 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.543 1 96.543 96.043 97.043 -7.6294E-06 0 0 0 0.0028243 1 54445 40.129 27.191 10 2467 578 1285 1423 4003 4003 958;959 HIKEEPLSEEEPCTSTAIASPEK 23 2 0 Phospho (STY) _HIKEEPLS(ph)EEEPCTSTAIASPEK_ HIKEEPLS(1)EEEPCTSTAIASPEK HIKEEPLS(34.82)EEEPCT(-34.82)S(-42.33)T(-48.83)AIAS(-63.35)PEK 0 0 1 1 B3KN82;Q9Y2X3 B3KN82 B3KN82 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 888.4044 3 888.069974 2661.18809 63635.65 1.0681 0.00094857 -0.14913 -0.00013244 0.919 0.00081614 888.404357586224 893.747068889227 81.765 1.3788 81.765 81.417 82.796 0 995 128 12 0 0 0 1.2575E-24 1 52710 92.121 92.121 5 1.0264 0.7595 0 225940000 106910000 119040000 2468 578 1285 1424 4004 4004 958;959 HILACASASDKK 12 2 0 Phospho (STY) _HILACASAS(ph)DKK_ HILACAS(0.324)AS(0.676)DKK HILACAS(-3.18)AS(3.18)DKK 0 0 1 1 B4DU02;Q59H82;A0A024QZ73;A0A024QZ72;Q13029 B4DU02 B4DU02 PRDM2 PR domain zinc finger protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 466.2254 3 460.882893 1379.62685 87211.92 0.21542 9.9285E-05 -0.4923 -0.00022689 -0.27688 -0.00012761 460.882924512892 466.225487477094 19.306 0.26567 19.306 19.178 19.444 0 32 10 5 0 0 0 0.0024048 1 6316 50.806 42.762 2 1.1276 0.88073 0 9389100 4984900 4404100 2469 8 1286 1425 4005 4005 9 HILILQNK 8 1 0 Unmodified _HILILQNK_ 0 0 0 0 F8W810;Q2VIR3;P41091 F8W810 F8W810 EIF2S3L;EIF2S3 Putative eukaryotic translation initiation factor 2 subunit 3-like protein;Eukaryotic translation initiation factor 2 subunit 3 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 493.816 2 489.808377 977.6022 NaN NaN NaN 0.46276 0.00022666 NaN NaN NaN NaN 107.78 0.21825 107.78 107.61 107.83 -7.6294E-06 0 0 0 0.011825 1 63037 69.234 39.661 1 NaN NaN 0 3104800 0 3104800 2470 833 1287 1426 4006 4006 HIMGQNVADYMR 12 0 1 2 Oxidation (M) _HIM(ox)GQNVADYM(ox)R_ HIM(1)GQNVADYM(1)R HIM(82.42)GQNVADYM(82.42)R 0 2 0 0 B3KTM6;A2RUM7;Q59GX9;P46777 B3KTM6 B3KTM6 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 738.8339 2 733.829385 1465.64422 71385.94 0.96263 0.00070641 -0.54699 -0.0004014 0.41564 0.00030501 733.829366343965 738.833373221683 74.881 1.2601 74.881 74.088 75.348 0 317 112 5 0 0 0 0.00025368 1 38468 82.417 56.858 1 3.1337 3.9417 0 45280000 14727000 30553000 2471 409 1288 1427 4007 4007 104;105 HIMGQNVADYMR 12 0 1 2 Oxidation (M) _HIM(ox)GQNVADYM(ox)R_ HIM(1)GQNVADYM(1)R HIM(43.5)GQNVADYM(43.5)R 0 2 0 0 B3KTM6;A2RUM7;Q59GX9;P46777 B3KTM6 B3KTM6 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 492.8919 3 489.555349 1465.64422 87705.4 0.30812 0.00015084 -0.16362 -8.0099E-05 0.1445 7.0741E-05 489.555160896712 492.891388907401 74.841 0.94254 74.841 74.293 75.236 0 258 85 5 0 0 0 0.01085 1 38605 43.502 37.07 1 2.7599 3.3918 0 30842000 8430000 22412000 2472 409 1288 1427 4008 4008 104;105 HITSEADSDPGNPVELCK 18 1 0 Phospho (STY) _HITSEADS(ph)DPGNPVELCK_ HIT(0.027)S(0.03)EADS(0.943)DPGNPVELCK HIT(-15.37)S(-15.05)EADS(15.05)DPGNPVELCK 0 0 1 0 B7Z7S9;Q562F6 B7Z7S9 B7Z7S9 SGOL2 Shugoshin-like 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1024.9375 2 1024.93518 2047.8558 59403.16 0.46103 0.00047252 1.2155 0.0012458 1.6765 0.0017183 1025.43784988402 1029.44496786577 70.268 0.96402 70.268 69.794 70.758 0 446 85 8 0 0 0 0.0001063 1 44391 48.729 43.226 3 1.8794 1.2441 0 29581000 10815000 18765000 2473 713 1289 1428 4009 4009 1183 HITVVHK 7 1 0 Unmodified _HITVVHK_ 0 0 0 0 B7Z4V7;Q2TB10 B7Z4V7 B7Z4V7 ZNF800 Zinc finger protein 800 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 417.2533 2 417.253237 832.491922 94886.75 0.32689 0.0001364 0.057473 2.3981E-05 0.38437 0.00016038 417.253141579987 421.26034480291 95.089 1.4258 95.089 94.417 95.843 0 323 118 4 0 0 0 0.021042 1 53558 98.415 60.044 1 1.0324 1.3093 0 35949000 18179000 17770000 2474 705 1290 1429 4010 4010 HIVSNDSSDSDDESHEPK 18 1 0 Unmodified _HIVSNDSSDSDDESHEPK_ 0 0 0 0 B4DZI4;A8K2S1;P47712 B4DZI4 B4DZI4 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 669.2869 3 666.615483 1996.82462 NaN NaN NaN -0.13004 -8.6686E-05 NaN NaN NaN NaN 67.456 0.50984 67.456 67.245 67.754 7.6294E-06 0 0 0 4.7713E-06 1 33027 58.024 46.333 1 NaN NaN 0 32410000 0 32410000 2475 450 1291 1430 4011 4011 HIVSNDSSDSDDESHEPK 18 1 0 Phospho (STY) _HIVSNDSSDS(ph)DDESHEPK_ HIVSNDSS(0.052)DS(0.944)DDES(0.003)HEPK HIVS(-50.61)NDS(-33.28)S(-12.55)DS(12.55)DDES(-24.75)HEPK 0 0 1 0 B4DZI4;A8K2S1;P47712 B4DZI4 B4DZI4 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 693.2714 3 693.270927 2076.79095 72647.97 0.97679 0.00067718 -0.19479 -0.00013504 0.782 0.00054214 693.270998376595 695.942282893528 16.846 0.59931 16.846 16.64 17.239 -1.9073E-06 160 21 12 0 0 0 5.3435E-14 2 4112 99.11 95.506 5 1.563 1.0365 0 75532000 30322000 45210000 2476 450 1291 1431 4012;4013 4013 782 HIYYITGETK 10 1 0 Unmodified _HIYYITGETK_ 0 0 0 0 Q2VPJ6;K9JA46;P07900;Q8TBA7;Q86U12;O75322;Q96HX7;Q58FG0 Q2VPJ6 Q2VPJ6 HSP90AA1;EL52;HSP90AA5P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 612.8167 2 612.816596 1223.61864 NaN NaN NaN -0.97129 -0.00059522 NaN NaN NaN NaN 101.75 0.14995 101.75 101.64 101.79 0 0 0 0 0.021485 1 58556 53.493 20.653 1 NaN NaN 0 1848900 1848900 0 2477 906 1292 1432 4014 4014 HLAEQFAVGEIITDMAK 17 1 0 Oxidation (M) _HLAEQFAVGEIITDM(ox)AK_ HLAEQFAVGEIITDM(1)AK HLAEQFAVGEIITDM(48.88)AK 0 1 0 0 A8K245;Q99986 A8K245 A8K245 VRK1 Serine/threonine-protein kinase VRK1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 632.9933 3 630.320626 1887.94005 76981.55 0.60571 0.00038179 -0.062006 -3.9084E-05 0.5437 0.00034271 630.654960614904 632.992440429627 145.78 0.21996 145.78 145.67 145.89 0 38 10 6 0 0 0 6.4659E-05 1 84093 48.883 48.883 1 1.6963 1.9473 0 1868500 728560 1139900 2478 448 1293 1433 4015 4015 118 HLAESESLLTSPPK 14 1 0 Phospho (STY) _HLAESESLLTS(ph)PPK_ HLAES(0.002)ES(0.006)LLT(0.083)S(0.908)PPK HLAES(-26.04)ES(-21.47)LLT(-10.4)S(10.4)PPK 0 0 1 0 Q14669 Q14669 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 798.8916 2 794.884553 1587.75455 NaN NaN NaN -0.33753 -0.00026829 NaN NaN NaN NaN 97.941 1.2809 97.941 97.141 98.422 7.6294E-06 0 0 0 0.00040335 1 55281 71.933 28.551 4 NaN NaN 0 31922000 0 31922000 2479 1057 1294 1434 4016 4016 1971 HLDDINFDVR 10 0 1 Unmodified _HLDDINFDVR_ 0 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 622.3067 2 622.306926 1242.5993 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.4 1 116.4 115.9 116.9 0 0 0 0 0.0036316 1 69568 66.692 40.955 1 2480 938 1295 1435 4017 4017 HLDDINFDVR 10 0 1 Unmodified _HLDDINFDVR_ 0 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 627.3123 2 622.306926 1242.5993 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.43 1 116.43 115.93 116.93 0 0 0 0 0.015719 1 69588 48.283 16.911 1 2481 938 1295 1435 4018 4018 HLDDINFDVR 10 0 1 Unmodified _HLDDINFDVR_ 0 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 627.312 2 622.306926 1242.5993 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.41 1 117.41 116.91 117.91 0 0 0 0 0.0071811 1 70308 57.598 26.226 1 2482 938 1295 1435 4019 4019 HLDDINFDVR 10 0 1 Unmodified _HLDDINFDVR_ 0 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 622.3069 2 622.306926 1242.5993 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.03 1 118.03 117.53 118.53 0 0 0 0 0.0006285 1 70770 78.334 51.732 1 2483 938 1295 1435 4020 4020 HLDDINFDVR 10 0 1 Unmodified _HLDDINFDVR_ 0 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 627.3109 2 622.306926 1242.5993 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.2 1 118.2 117.7 118.7 -7.6294E-06 0 0 0 0.015545 1 70896 48.423 29.641 1 2484 938 1295 1435 4021 4021 HLEAILTK 8 1 0 Unmodified _HLEAILTK_ 0 0 0 0 A0A024R3R7;Q5T3Q7;B2RWN5;Q9H583 A0A024R3R7 A0A024R3R7 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 462.7795 2 462.779285 923.544017 NaN NaN NaN -0.021313 -9.8634E-06 NaN NaN NaN NaN 106.71 0.19812 106.71 106.56 106.75 0 0 0 0 0.0012822 1 62165 80.462 44.969 1 NaN NaN 0 2340900 2340900 0 2485 80 1296 1436 4022 4022 HLFGQPNSAYDFK 13 1 0 Unmodified _HLFGQPNSAYDFK_ 0 0 0 0 B7ZLZ7;A0A024R158;O95347;B3KMB1;B3KM27;A0A0C4DGE5 B7ZLZ7 B7ZLZ7 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 766.3754 2 762.367515 1522.72048 NaN NaN NaN -0.30736 -0.00023432 NaN NaN NaN NaN 115.47 0.097893 115.47 115.43 115.53 0 0 0 0 0.016845 1 68908 41.399 12.313 1 NaN NaN 0 4494300 0 4494300 2486 39 1297 1437 4023 4023 HLGLLEK 7 1 0 Unmodified _HLGLLEK_ 0 0 0 0 Q9Y3A2 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 405.2479 2 405.247621 808.480688 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.63 1 108.63 108.13 109.13 7.6294E-06 0 0 0 0.026431 1 63698 74.717 31.651 1 2487 1249 1298 1438 4024 4024 HLLAVHSK 8 1 0 Phospho (STY) _HLLAVHS(ph)K_ HLLAVHS(1)K HLLAVHS(59.43)K 0 0 1 0 Q8WWU0;Q8WXB7;E9PEP7;A0A024RC04;B7ZKJ5;P17010;B4DH67;B4DS73;Q9Y462;P08048 Q8WWU0 Q8WWU0 ZFX;ZNF711;ZFY Zinc finger X-chromosomal protein;Zinc finger protein 711;Zinc finger Y-chromosomal protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 492.7551 2 492.754959 983.495366 88343.06 0.12905 6.3591E-05 0.24828 0.00012234 0.37733 0.00018593 492.754975310581 496.762091131587 21.626 0.36617 21.626 21.48 21.846 0 63 16 6 0 0 0 0.013235 2 8387 59.426 51.78 1 1.042 0.78082 0 9821100 4657000 5164100 2488 204 1299 1439 4025;4026 4026 316 HLLTLK 6 1 0 Unmodified _HLLTLK_ 0 0 0 0 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 362.7393 2 362.739431 723.46431 101967 -0.11358 -4.12E-05 0.26426 9.5859E-05 0.15068 5.4659E-05 362.739465335237 366.74648511241 109.82 0.57294 109.82 109.61 110.18 0 111 43 4 0 0 0 0.027148 1 64716 106.29 8.6456 1 0.99623 1.2145 0 18554000 8588100 9966100 2489 1213 1300 1440 4027 4027 HLPGHPYVR 9 0 1 Unmodified _HLPGHPYVR_ 0 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 362.5332 3 359.198042 1074.5723 NaN NaN NaN -0.611 -0.00021947 NaN NaN NaN NaN 115.54 0.73763 115.54 115.38 116.11 -7.6294E-06 0 0 0 0.032209 1 69305 60.436 44.234 1 NaN NaN 0 11896000 0 11896000 2490 1232 1301 1441 4028 4028 HLPSTEPDPHVVR 13 0 1 Unmodified _HLPSTEPDPHVVR_ 0 0 0 0 M0QYM5;M0QYI8;M0QYZ0;M0R3F1;A8K3W4;A0A024R0J9;A0A0A0MRA5;B7Z4B8;A8K6U7;A8K5K0;Q9BUJ2 M0QYM5 M0QYM5 HNRNPUL1;HNRPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 498.5961 3 495.259918 1482.75793 NaN NaN NaN NaN NaN NaN NaN NaN NaN 102.65 1 102.65 102.15 103.15 0 0 0 0 0.0017881 1 59176 53.967 38.427 1 2491 30 1302 1442 4029 4029 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 0 A3KPC7;A0A024RAS2;Q08AJ9;B2R5B3;A4FTV9;A0A024R017;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q93077;Q7L7L0;Q6FI13;P20671;P0C0S8;P04908;H0YFX9;B4E0B3;B2R5B6;Q96QV6;P16104;Q71UI9;P0C0S5;C9J0D1;C9J386 A3KPC7;Q71UI9 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AB;HIST1H2AK;HIST1H2AC;HIST1H2AJ;HIST2H2AC;HIST3H2A;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AA;H2AFX;H2AFV;H2AFZ Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E;Histone H2A type 1-A;Histone H2AX;Histone H2A.V;Histone H2A.Z MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 425.7664 2 425.766512 849.518471 90618.17 -0.017125 -7.2913E-06 -0.47865 -0.00020379 -0.49577 -0.00021108 425.766631925632 430.77032601768 111.52 4.2086 111.52 109.23 113.44 0 1928 365 9 0 0 0 2.3459E-09 5 64456 146.21 45.538 1 0.73957 0.94011 0 4440200000 2554700000 1885500000 2492 961;22 1303 1443 4030;4031;4032;4033;4034 4030 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 0 A3KPC7;A0A024RAS2;Q08AJ9;B2R5B3;A4FTV9;A0A024R017;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q93077;Q7L7L0;Q6FI13;P20671;P0C0S8;P04908;H0YFX9;B4E0B3;B2R5B6;Q96QV6;P16104;Q71UI9;P0C0S5;C9J0D1;C9J386 A3KPC7;Q71UI9 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AB;HIST1H2AK;HIST1H2AC;HIST1H2AJ;HIST2H2AC;HIST3H2A;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AA;H2AFX;H2AFV;H2AFZ Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E;Histone H2A type 1-A;Histone H2AX;Histone H2A.V;Histone H2A.Z MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 425.7666 2 425.766512 849.518471 95714.73 0.13162 5.6038E-05 -0.32285 -0.00013746 -0.19124 -8.1422E-05 425.766407778271 430.77045222885 118.69 0.5974 118.69 118.38 118.97 7.6294E-06 114 53 4 0 0 0 0.024195 1 71163 97.596 22.764 1 0.63468 0.70834 0 9443100 5999800 3443300 2493 961;22 1303 1443 4035 4035 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 0 A3KPC7;A0A024RAS2;Q08AJ9;B2R5B3;A4FTV9;A0A024R017;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q93077;Q7L7L0;Q6FI13;P20671;P0C0S8;P04908;H0YFX9;B4E0B3;B2R5B6;Q96QV6;P16104;Q71UI9;P0C0S5;C9J0D1;C9J386 A3KPC7;Q71UI9 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AB;HIST1H2AK;HIST1H2AC;HIST1H2AJ;HIST2H2AC;HIST3H2A;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AA;H2AFX;H2AFV;H2AFZ Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E;Histone H2A type 1-A;Histone H2AX;Histone H2A.V;Histone H2A.Z ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 430.7707 2 425.766512 849.518471 NaN NaN NaN -0.082549 -3.5147E-05 NaN NaN NaN NaN 113.4 1.0671 113.4 113.1 114.17 -7.6294E-06 0 0 0 5.5775E-06 1 67318 88.734 19.345 1 NaN NaN 0 12865000 0 12865000 2494 961;22 1303 1443 4036 4036 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 0 A3KPC7;A0A024RAS2;Q08AJ9;B2R5B3;A4FTV9;A0A024R017;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q93077;Q7L7L0;Q6FI13;P20671;P0C0S8;P04908;H0YFX9;B4E0B3;B2R5B6;Q96QV6;P16104;Q71UI9;P0C0S5;C9J0D1;C9J386 A3KPC7;Q71UI9 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AB;HIST1H2AK;HIST1H2AC;HIST1H2AJ;HIST2H2AC;HIST3H2A;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AA;H2AFX;H2AFV;H2AFZ Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E;Histone H2A type 1-A;Histone H2AX;Histone H2A.V;Histone H2A.Z ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 425.7667 2 425.766512 849.518471 NaN NaN NaN -0.081957 -3.4895E-05 NaN NaN NaN NaN 128.47 0.38336 128.47 128.22 128.6 0 0 0 0 0.02268 1 77918 56.51 8.2684 1 NaN NaN 0 1916800 1916800 0 2495 961;22 1303 1443 4037 4037 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 0 A3KPC7;A0A024RAS2;Q08AJ9;B2R5B3;A4FTV9;A0A024R017;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q93077;Q7L7L0;Q6FI13;P20671;P0C0S8;P04908;H0YFX9;B4E0B3;B2R5B6;Q96QV6;P16104;Q71UI9;P0C0S5;C9J0D1;C9J386 A3KPC7;Q71UI9 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AB;HIST1H2AK;HIST1H2AC;HIST1H2AJ;HIST2H2AC;HIST3H2A;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AA;H2AFX;H2AFV;H2AFZ Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E;Histone H2A type 1-A;Histone H2AX;Histone H2A.V;Histone H2A.Z MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 425.7664 2 425.766512 849.518471 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.72 1 108.72 108.22 109.22 0 0 0 0 0.032028 1 63778 72.021 19.79 1 2496 961;22 1303 1443 4038 4038 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 0 A3KPC7;A0A024RAS2;Q08AJ9;B2R5B3;A4FTV9;A0A024R017;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q93077;Q7L7L0;Q6FI13;P20671;P0C0S8;P04908;H0YFX9;B4E0B3;B2R5B6;Q96QV6;P16104;Q71UI9;P0C0S5;C9J0D1;C9J386 A3KPC7;Q71UI9 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AB;HIST1H2AK;HIST1H2AC;HIST1H2AJ;HIST2H2AC;HIST3H2A;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AA;H2AFX;H2AFV;H2AFZ Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E;Histone H2A type 1-A;Histone H2AX;Histone H2A.V;Histone H2A.Z MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 425.7664 2 425.766512 849.518471 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.31 1 113.31 112.81 113.81 0 0 0 0 0.011227 1 67307 80.377 10.988 1 2497 961;22 1303 1443 4039 4039 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 0 A3KPC7;A0A024RAS2;Q08AJ9;B2R5B3;A4FTV9;A0A024R017;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q93077;Q7L7L0;Q6FI13;P20671;P0C0S8;P04908;H0YFX9;B4E0B3;B2R5B6;Q96QV6;P16104;Q71UI9;P0C0S5;C9J0D1;C9J386 A3KPC7;Q71UI9 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AB;HIST1H2AK;HIST1H2AC;HIST1H2AJ;HIST2H2AC;HIST3H2A;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AA;H2AFX;H2AFV;H2AFZ Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E;Histone H2A type 1-A;Histone H2AX;Histone H2A.V;Histone H2A.Z MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 425.7664 2 425.766512 849.518471 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.33 1 113.33 112.83 113.83 0 0 0 0 0.031668 1 67323 72.618 8.3423 1 2498 961;22 1303 1443 4040 4040 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 0 A3KPC7;A0A024RAS2;Q08AJ9;B2R5B3;A4FTV9;A0A024R017;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q93077;Q7L7L0;Q6FI13;P20671;P0C0S8;P04908;H0YFX9;B4E0B3;B2R5B6;Q96QV6;P16104;Q71UI9;P0C0S5;C9J0D1;C9J386 A3KPC7;Q71UI9 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AB;HIST1H2AK;HIST1H2AC;HIST1H2AJ;HIST2H2AC;HIST3H2A;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AA;H2AFX;H2AFV;H2AFZ Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E;Histone H2A type 1-A;Histone H2AX;Histone H2A.V;Histone H2A.Z MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 425.7664 2 425.766512 849.518471 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.74 1 117.74 117.24 118.24 0 0 0 0 1.1631E-12 1 70564 122.5 37.888 1 2499 961;22 1303 1443 4041 4041 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 0 A3KPC7;A0A024RAS2;Q08AJ9;B2R5B3;A4FTV9;A0A024R017;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q93077;Q7L7L0;Q6FI13;P20671;P0C0S8;P04908;H0YFX9;B4E0B3;B2R5B6;Q96QV6;P16104;Q71UI9;P0C0S5;C9J0D1;C9J386 A3KPC7;Q71UI9 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AB;HIST1H2AK;HIST1H2AC;HIST1H2AJ;HIST2H2AC;HIST3H2A;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AA;H2AFX;H2AFV;H2AFZ Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E;Histone H2A type 1-A;Histone H2AX;Histone H2A.V;Histone H2A.Z ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 425.7664 2 425.766512 849.518471 NaN NaN NaN 0.094847 4.0383E-05 NaN NaN NaN NaN 68.968 2.9108 68.968 68.472 71.383 0 0 0 0 2.5101E-43 3 43221 135.82 41.933 1 NaN NaN 0 51294000 51294000 0 2500 961;22 1303 1443 4042;4043;4044 4042 HLQLAIR 7 0 1 Unmodified _HLQLAIR_ 0 0 0 0 A3KPC7;A0A024RAS2;Q08AJ9;B2R5B3;A4FTV9;A0A024R017;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q93077;Q7L7L0;Q6FI13;P20671;P0C0S8;P04908;H0YFX9;B4E0B3;B2R5B6;Q96QV6;P16104;Q71UI9;P0C0S5;C9J0D1;C9J386 A3KPC7;Q71UI9 Q71UI9 HIST1H2AH;H2AFJ;HIST1H2AB;HIST1H2AK;HIST1H2AC;HIST1H2AJ;HIST2H2AC;HIST3H2A;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AA;H2AFX;H2AFV;H2AFZ Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E;Histone H2A type 1-A;Histone H2AX;Histone H2A.V;Histone H2A.Z MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 430.7707 2 425.766512 849.518471 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.719 1 68.719 68.219 69.219 0 0 0 0 0.033793 1 43166 69.093 22.291 1 2501 961;22 1303 1443 4045 4045 HLQLAVR 7 0 1 Unmodified _HLQLAVR_ 0 0 0 0 Q8IUE6;A2RUA4 Q8IUE6 Q8IUE6 HIST2H2AB Histone H2A type 2-B;Histone H2A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 418.7584 2 418.758687 835.502821 92921.34 0.7958 0.00033325 -0.39225 -0.00016426 0.40355 0.00016899 418.758425467711 423.762562604972 101.54 2.2592 101.54 100.48 102.74 -7.6294E-06 735 179 7 0 0 0 1.0978E-14 2 58531 150.07 52.428 1 0.90494 1.1453 0 384790000 204370000 180420000 2502 1142 1304 1444 4046;4047 4047 HLQTGENHTSVDPR 14 0 1 Unmodified _HLQTGENHTSVDPR_ 0 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 530.9257 3 530.925487 1589.75463 81011.17 0.61032 0.00032403 0.0188 9.9814E-06 0.62912 0.00033401 530.925330724653 534.261412335612 80.138 0.97923 80.138 79.726 80.705 0 345 89 6 0 0 0 3.4791E-06 2 42409 83.692 57.568 1 0.84616 1.0681 0 87304000 47442000 39862000 2503 939 1305 1445 4048;4049 4048 HLSPGITNTEDDDTLSTSSAEVK 23 1 0 Phospho (STY) _HLS(ph)PGITNTEDDDTLSTSSAEVK_ HLS(0.884)PGIT(0.105)NT(0.01)EDDDT(0.001)LSTSSAEVK HLS(9.27)PGIT(-9.27)NT(-19.55)EDDDT(-29.72)LS(-33.06)T(-35.75)S(-38.11)S(-40.1)AEVK 0 0 1 0 Q9NS39 Q9NS39 Q9NS39 ADARB2 Double-stranded RNA-specific editase B2 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 835.6494 3 833.037439 2496.09049 68682.86 0.71933 0.00059923 -0.077503 -6.4563E-05 0.64183 0.00053467 833.372447811599 836.043163748853 88.726 0.64481 88.726 88.41 89.055 0 156 57 6 0 0 0 1.0006E-05 1 48319 43.956 43.956 8 1.5882 1.964 0 23744000 10361000 13383000 2504 1217 1306 1446 4050 4050 2448 HLSPGITNTEDDDTLSTSSAEVK 23 1 0 Phospho (STY) _HLS(ph)PGITNTEDDDTLSTSSAEVK_ HLS(0.872)PGIT(0.101)NT(0.028)EDDDTLSTSSAEVK HLS(9.38)PGIT(-9.38)NT(-14.99)EDDDT(-50.47)LS(-64.64)T(-66.78)S(-69.92)S(-70.92)AEVK 0 0 1 0 Q9NS39 Q9NS39 Q9NS39 ADARB2 Double-stranded RNA-specific editase B2 MULTI-SECPEP 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 836.3768 3 833.037439 2496.09049 63727.72 1.0389 0.00086546 0.023085 1.923E-05 1.062 0.0008847 833.371582305559 836.043179866243 87.088 0.63322 87.088 86.829 87.462 0 180 58 4 0 0 0 1.3266E-14 1 55972 73.361 73.361 8 1.9327 1.2651 0 49364000 19162000 30202000 2505 1217 1306 1446 4051 4051 2448 HLTDAYFK 8 1 0 Unmodified _HLTDAYFK_ 0 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 501.7604 2 497.753267 993.491981 85404.52 0.78058 0.00038854 -0.21081 -0.00010493 0.56977 0.00028361 497.753127719799 501.760142043257 105.79 3.2357 105.79 103.7 106.93 0 992 229 7 0 0 0 0.0011453 8 61235 125.25 95.067 1 0.93683 1.16 0 182110000 97749000 84365000 2506 199 1307 1447 4052;4053;4054;4055;4056;4057;4058;4059 4056 HLTDAYFK 8 1 0 Unmodified _HLTDAYFK_ 0 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 501.7612 2 497.753267 993.491981 NaN NaN NaN NaN NaN NaN NaN NaN NaN 107.13 1 107.13 106.63 107.63 7.6294E-06 0 0 0 0.0052185 1 62470 81.784 53.272 1 2507 199 1307 1447 4060 4060 HLTDAYFK 8 1 0 Unmodified _HLTDAYFK_ 0 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B4DRX3 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 497.7531 2 497.753267 993.491981 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.551 1 62.551 62.051 63.051 0 0 0 0 0.019462 1 38893 69.998 48.845 1 2508 199 1307 1447 4061 4061 HLTHENVQR 9 0 1 Unmodified _HLTHENVQR_ 0 0 0 0 B4DW90;Q53HM6;B3KY12;A8K7V1;A8K566;Q12874 B4DW90 B4DW90 SF3A3 Splicing factor 3A subunit 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 378.5321 3 378.531861 1132.57375 98529.98 0.16814 6.3647E-05 0.10663 4.0363E-05 0.27477 0.00010401 378.531829809758 381.868009025494 80.435 1.2374 80.435 79.949 81.186 0 302 112 5 0 0 0 0.00012398 1 42483 83.998 52.577 1 1.4412 1.8094 0 42061000 17366000 24695000 2509 473 1308 1448 4062 4062 HLTHENVQR 9 0 1 Unmodified _HLTHENVQR_ 0 0 0 0 B4DW90;Q53HM6;B3KY12;A8K7V1;A8K566;Q12874 B4DW90 B4DW90 SF3A3 Splicing factor 3A subunit 3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 381.868 3 378.531861 1132.57375 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.156 1 80.156 79.656 80.656 0 0 0 0 0.00065656 1 42411 84.615 41.532 1 2510 473 1308 1448 4063 4063 HLTVPK 6 1 0 Unmodified _HLTVPK_ 0 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 347.7159 2 347.715956 693.41736 NaN NaN NaN 0.20213 7.0283E-05 NaN NaN NaN NaN 84.658 0.38369 84.658 84.35 84.734 0 0 0 0 0.034479 1 45459 59.287 0 1 NaN NaN 0 7489800 7489800 0 2511 1167 1309 1449 4064 4064 HLTYNDFINK 10 1 0 Unmodified _HLTYNDFINK_ 0 0 0 0 Q71UH4;Q02880;Q59H80;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 637.3301 2 632.81967 1263.62479 76705.8 0.61568 0.00038961 -0.026204 -1.6582E-05 0.58948 0.00037303 632.819698615501 636.826809121318 111.66 0.74416 111.66 111.46 112.21 0 194 63 7 0 0 0 8.2253E-15 3 66081 144.09 125.11 1 0.56203 0.7123 0 33532000 21460000 12072000 2512 1032 1310 1450 4065;4066;4067 4066 HMLPSGFR 8 0 1 Oxidation (M) _HM(ox)LPSGFR_ HM(1)LPSGFR HM(42.91)LPSGFR 0 1 0 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 480.7404 2 480.739637 959.464721 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.436 1 89.436 88.936 89.936 0 0 0 0 0.02615 1 49007 42.914 24.249 1 2513 64 1311 1451 4068 4068 15 HMLPSGFR 8 0 1 Oxidation (M) _HM(ox)LPSGFR_ HM(1)LPSGFR HM(50.13)LPSGFR 0 1 0 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 480.7399 2 480.739637 959.464721 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.195 1 90.195 89.695 90.695 0 0 0 0 0.016969 1 49585 50.127 22.81 1 2514 64 1311 1451 4069 4069 15 HMLPSGFR 8 0 1 Oxidation (M) _HM(ox)LPSGFR_ HM(1)LPSGFR HM(40.1)LPSGFR 0 1 0 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 485.7442 2 480.739637 959.464721 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.966 1 90.966 90.466 91.466 0 0 0 0 0.033332 1 50153 40.098 17.808 1 2515 64 1311 1451 4070 4070 15 HMLPSGFR 8 0 1 Oxidation (M) _HM(ox)LPSGFR_ HM(1)LPSGFR HM(67.03)LPSGFR 0 1 0 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 480.7402 2 480.739637 959.464721 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.967 1 90.967 90.467 91.467 0 0 0 0 0.015249 1 50154 67.032 39.715 1 2516 64 1311 1451 4071 4071 15 HMLPSGFRK 9 1 1 Oxidation (M) _HM(ox)LPSGFRK_ HM(1)LPSGFRK HM(41.43)LPSGFRK 0 1 0 1 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 369.5345 3 363.527171 1087.55968 NaN NaN NaN NaN NaN NaN NaN NaN NaN 102.69 1 102.69 102.19 103.19 0 0 0 0 0.007017 1 59206 41.427 33.86 1 2517 64 1312 1452 4072 4072 15 HNAVIEHLK 9 1 0 Unmodified _HNAVIEHLK_ 0 0 0 0 E7ETD6;Q12830;J3KSK9;E9PE19;B4DJV8;Q9H5E0 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 354.2012 3 354.201452 1059.58253 105070.4 -0.17114 -6.0617E-05 0.039461 1.3977E-05 -0.13168 -4.664E-05 354.201432784292 356.872871723991 121.31 0.84717 121.31 120.78 121.63 7.6294E-06 132 67 4 0 0 0 0.016611 2 72809 35.908 32.508 1 0.68798 0.81585 0 7793300 3410300 4383000 2518 791 1313 1453 4073;4074 4073 HNDDEQYAWESSAGGSFTVR 20 0 1 Unmodified _HNDDEQYAWESSAGGSFTVR_ 0 0 0 0 A0A024RD80;P08238;B4DGL0;Q6PK50;Q14568;Q2VPJ6;K9JA46;P07900;Q8TBA7 A0A024RD80;Q2VPJ6 A0A024RD80 HSP90AB1;HSP90AA2P;HSP90AA1;EL52 Heat shock protein HSP 90-beta;Heat shock protein HSP 90-alpha A2;Heat shock protein HSP 90-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 752.9934 3 752.657794 2254.95155 70262.51 0.69831 0.00052559 0.28492 0.00021445 0.98323 0.00074004 752.9923085042 755.994087090402 146.49 0.26917 146.49 146.35 146.62 0 138 23 8 0 0 0 1.0714E-10 3 84492 77.66 77.66 1 2.0223 2.2548 0 9314200 3590500 5723700 2519 223;906 1314 1454 4075;4076;4077 4076 HNDIVDSDSDAEDR 14 0 1 Phospho (STY) _HNDIVDS(ph)DSDAEDR_ HNDIVDS(0.991)DS(0.009)DAEDR HNDIVDS(20.53)DS(-20.53)DAEDR 0 0 1 0 E9PFK5;A8KA74;P78316 E9PFK5 E9PFK5 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 839.3168 2 834.312678 1666.6108 67960.25 0.80111 0.00066838 -0.099515 -8.3026E-05 0.7016 0.00058535 834.31248030469 839.316859880459 57.113 0.73145 57.113 56.781 57.512 0 200 61 5 0 0 0 2.1802E-08 2 25060 98.281 85.654 2 1.0671 1.2787 0 17350000 8575900 8773700 2520 507 1315 1455 4078;4079 4079 872 HNDIVDSDSDAEDR 14 0 1 Phospho (STY) _HNDIVDS(ph)DSDAEDR_ HNDIVDS(0.984)DS(0.016)DAEDR HNDIVDS(17.96)DS(-17.96)DAEDR 0 0 1 0 E9PFK5;A8KA74;P78316 E9PFK5 E9PFK5 NOP14 Nucleolar protein 14 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 839.3174 2 834.312678 1666.6108 66941.55 0.90606 0.00075594 0.14489 0.00012088 1.0509 0.00087682 834.313188357161 839.316742171513 27.481 0.49746 27.481 27.194 27.691 0 154 30 8 0 0 0 2.1161E-12 1 13387 108.34 96.726 2 1.2668 0.87531 0 42941000 19439000 23502000 2521 507 1315 1455 4080 4080 872 HNDIVDSDSDAEDR 14 0 1 Unmodified _HNDIVDSDSDAEDR_ 0 0 0 0 E9PFK5;A8KA74;P78316 E9PFK5 E9PFK5 NOP14 Nucleolar protein 14 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 794.3312 2 794.329512 1586.64447 NaN NaN NaN 0.7842 0.00062291 NaN NaN NaN NaN 67.917 0.12216 67.917 67.859 67.981 0 0 0 0 2.5804E-07 1 33544 91.914 66.697 1 NaN NaN 0 3664000 3664000 0 2522 507 1315 1456 4081 4081 HNDLDDVGK 9 1 0 Unmodified _HNDLDDVGK_ 0 0 0 0 P49588 P49588 P49588 AARS Alanine--tRNA ligase, cytoplasmic MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 510.746 2 506.738345 1011.46214 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.183 1 76.183 75.683 76.683 0 0 0 0 0.0020517 1 39398 77.14 22.983 1 2523 1000 1316 1457 4082 4082 HNKPEVEVR 9 1 1 Unmodified _HNKPEVEVR_ 0 0 0 1 F8WE39;F8WDD7;Q9H7Z5;H7C0A3;F8WCF6;A0A0A6YYG9;P59998 F8WE39 F8WE39 ARPC4-TTLL3;ARPC4 Actin-related protein 2/3 complex subunit 4 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 375.8766 3 369.868362 1106.58326 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.286 1 95.286 94.786 95.786 0 0 0 0 0.0092981 1 53514 44.318 31.741 1 2524 302 1317 1458 4083 4083 HNKPEVEVR 9 1 1 Unmodified _HNKPEVEVR_ 0 0 0 1 F8WE39;F8WDD7;Q9H7Z5;H7C0A3;F8WCF6;A0A0A6YYG9;P59998 F8WE39 F8WE39 ARPC4-TTLL3;ARPC4 Actin-related protein 2/3 complex subunit 4 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 375.8758 3 369.868362 1106.58326 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.105 1 96.105 95.605 96.605 0 0 0 0 0.02057 1 54111 35.511 26.297 1 2525 302 1317 1458 4084 4084 HNTAVSQLTK 10 1 0 Unmodified _HNTAVSQLTK_ 0 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 549.7996 2 549.798737 1097.58292 80726.6 0.62031 0.00034105 -0.043156 -2.3727E-05 0.57716 0.00031732 549.79867779561 553.805770389879 79.616 1.1366 79.616 79.041 80.177 0 451 90 6 0 0 0 5.0057E-65 3 42316 188.99 188.99 1 0.84068 1.0418 0 130360000 70667000 59691000 2526 1220 1318 1459 4085;4086;4087 4087 HNTAVSQLTK 10 1 0 Unmodified _HNTAVSQLTK_ 0 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 553.8058 2 549.798737 1097.58292 82027.71 0.53382 0.00029349 0.25485 0.00014012 0.78867 0.00043361 549.798854581847 553.805905607857 20.435 0.36182 20.435 20.3 20.662 -1.9073E-06 70 16 7 0 0 0 0.0035857 2 7273 80.24 70.846 1 2.0893 1.5912 0 11468000 4088200 7379500 2527 1220 1318 1459 4088;4089 4088 HPAKPDPSGECNPDLR 16 1 1 Unmodified _HPAKPDPSGECNPDLR_ 0 0 0 1 E9PC52;Q6FHQ0;Q16576;Q5JP01 E9PC52 E9PC52 RBBP7 Histone-binding protein RBBP7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 603.2893 3 597.281053 1788.82133 77076.18 0.75794 0.0004527 -0.13221 -7.8965E-05 0.62573 0.00037374 597.281021614412 603.288885276847 82.347 1.0001 82.347 81.682 82.683 0 480 94 8 0 0 0 1.2464E-11 1 43892 97.214 85.774 1 0.84175 1.0099 0 143480000 75496000 67982000 2528 798 1319 1460 4090 4090 HPDASVNFSEFSK 13 1 0 Unmodified _HPDASVNFSEFSK_ 0 0 0 0 Q9NYD7;Q5T7C4;B7Z965;Q59GW1;Q75MM1;A0A024RDR0;P09429 Q9NYD7 Q9NYD7 HMG1;HMGB1;WUGSC:H_NH0244E06.1 High mobility group protein B1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 733.3441 2 732.84133 1463.66811 NaN NaN NaN -0.043059 -3.1556E-05 NaN NaN NaN NaN 107.36 0.44988 107.36 107.05 107.5 0 0 0 0 0.010172 2 62531 46.73 11.077 1 NaN NaN 0 5637900 5637900 0 2529 231 1320 1461 4091;4092 4092 HPDVEVDGFSELR 13 0 1 Unmodified _HPDVEVDGFSELR_ 0 0 0 0 B2R5W3;A0A024R3T8;P09874;B4E0E1;Q05D33;Q6PJL0;Q5VX84;Q5VX85 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 755.3657 2 750.359887 1498.70522 71881.86 0.8296 0.0006225 -0.050252 -3.7707E-05 0.77935 0.00058479 750.360079258598 755.36409130101 115.61 1.1403 115.61 115.01 116.16 0 204 97 5 0 0 0 0.01998 1 68648 46.844 39.277 1 0.84811 0.98144 0 12430000 8140700 4289600 2530 81 1321 1462 4093 4093 HPDVEVDGFSELR 13 0 1 Unmodified _HPDVEVDGFSELR_ 0 0 0 0 B2R5W3;A0A024R3T8;P09874;B4E0E1;Q05D33;Q6PJL0;Q5VX84;Q5VX85 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 755.3634 2 750.359887 1498.70522 71874.29 0.90702 0.00068059 0.021278 1.5966E-05 0.9283 0.00069656 750.359808186803 755.364419239628 116.36 0.41804 116.36 116.11 116.53 0 99 37 4 0 0 0 0.016394 1 69467 56.404 56.404 1 0.54691 0.65072 0 15712000 10902000 4810000 2531 81 1321 1462 4094 4094 HPDVEVDGFSELR 13 0 1 Unmodified _HPDVEVDGFSELR_ 0 0 0 0 B2R5W3;A0A024R3T8;P09874;B4E0E1;Q05D33;Q6PJL0;Q5VX84;Q5VX85 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 500.5749 3 500.575684 1498.70522 NaN NaN NaN -0.28347 -0.0001419 NaN NaN NaN NaN 116.75 0.43472 116.75 116.65 117.09 0 0 0 0 0.014638 1 69926 38.189 29.805 1 NaN NaN 0 3946400 3946400 0 2532 81 1321 1462 4095 4095 HPDVEVDGFSELR 13 0 1 Unmodified _HPDVEVDGFSELR_ 0 0 0 0 B2R5W3;A0A024R3T8;P09874;B4E0E1;Q05D33;Q6PJL0;Q5VX84;Q5VX85 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 750.8621 2 750.359887 1498.70522 NaN NaN NaN -0.34334 -0.00025763 NaN NaN NaN NaN 116.55 0.98898 116.55 116.33 117.32 0 0 0 0 0.0031885 1 69994 55.426 20.012 1 NaN NaN 0 12072000 12072000 0 2533 81 1321 1462 4096 4096 HPEHAEQNIR 10 0 1 Unmodified _HPEHAEQNIR_ 0 0 0 0 A8KAG1;Q5T3I0;F8W895;A0A0A0MRK1;E9PAV9 A8KAG1 A8KAG1 GPATCH4 G patch domain-containing protein 4 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 414.2071 3 410.870654 1229.59013 NaN NaN NaN -0.33122 -0.00013609 NaN NaN NaN NaN 75.075 0.20317 75.075 74.938 75.141 0 0 0 0 0.0061474 1 38509 68.657 51.258 1 NaN NaN 0 7318600 0 7318600 2534 509 1322 1463 4097 4097 HPEHAEQNIR 10 0 1 Unmodified _HPEHAEQNIR_ 0 0 0 0 A8KAG1;Q5T3I0;F8W895;A0A0A0MRK1;E9PAV9 A8KAG1 A8KAG1 GPATCH4 G patch domain-containing protein 4 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 414.2067 3 410.870654 1229.59013 NaN NaN NaN -0.047143 -1.937E-05 NaN NaN NaN NaN 77.78 3.4379 77.78 75.3 78.738 0 0 0 0 6.7605E-15 1 39122 112.36 88.506 1 NaN NaN 0 56099000 0 56099000 2535 509 1322 1463 4098 4098 HPELNISEEGITK 13 1 0 Unmodified _HPELNISEEGITK_ 0 0 0 0 B4DNQ1;E9PKP7;A8K962;P17480;O00164;B4DLB0;Q05BZ1 B4DNQ1 B4DNQ1 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 737.8872 2 733.877913 1465.74127 71391.53 1.5989 0.0011734 0.24694 0.00018122 1.8459 0.0013546 733.87789213945 737.885067576475 101.29 1.1322 101.29 101.07 102.2 0 395 95 7 0 0 0 1.4453E-53 2 58185 174.9 120.49 1 0.61536 0.76536 0 82204000 50707000 31497000 2536 501 1323 1464 4099;4100 4100 HPELNISEEGITK 13 1 0 Phospho (STY) _HPELNIS(ph)EEGITK_ HPELNIS(1)EEGITK HPELNIS(34.03)EEGIT(-34.03)K 0 0 1 0 B4DNQ1;E9PKP7;A8K962;P17480;O00164;B4DLB0;Q05BZ1 B4DNQ1 B4DNQ1 UBTF Nucleolar transcription factor 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 773.8599 2 773.861078 1545.7076 NaN NaN NaN 0.27077 0.00020954 NaN NaN NaN NaN 90.491 1.2146 90.491 89.832 91.046 0 0 0 0 0.00017473 1 49389 75.669 51.598 2 NaN NaN 0 36893000 36893000 0 2537 501 1323 1465 4101 4101 859 HPELNISEEGITK 13 1 0 Phospho (STY) _HPELNIS(ph)EEGITK_ HPELNIS(0.976)EEGIT(0.024)K HPELNIS(16.04)EEGIT(-16.04)K 0 0 1 0 B4DNQ1;E9PKP7;A8K962;P17480;O00164;B4DLB0;Q05BZ1 B4DNQ1 B4DNQ1 UBTF Nucleolar transcription factor 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 777.8686 2 773.861078 1545.7076 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.956 1 89.956 89.456 90.456 0 0 0 0 0.00028803 1 49398 58.831 36.958 2 2538 501 1323 1465 4102 4102 859 HPELNISEEGITK 13 1 0 Phospho (STY) _HPELNIS(ph)EEGITK_ HPELNIS(1)EEGITK HPELNIS(44.28)EEGIT(-44.28)K 0 0 1 0 B4DNQ1;E9PKP7;A8K962;P17480;O00164;B4DLB0;Q05BZ1 B4DNQ1 B4DNQ1 UBTF Nucleolar transcription factor 1 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 777.8693 2 773.861078 1545.7076 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.497 1 80.497 79.997 80.997 0 0 0 0 0.0022335 1 51517 91.076 62.793 2 2539 501 1323 1465 4103 4103 859 HPGSFDVVHVK 11 1 0 Unmodified _HPGSFDVVHVK_ 0 0 0 0 Q96IR1;C9JEH7;A4FU11;Q53HV1;Q496E4;B2R491;P62701;P22090 Q96IR1 Q96IR1 RPS4X;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 410.5551 3 407.884012 1220.63021 93187.84 -0.15347 -6.2597E-05 0.1518 6.1917E-05 -0.0016663 -6.7964E-07 407.884043756838 410.555312882407 145.49 0.83165 145.49 145.27 146.1 0 185 37 7 0 0 0 2.9653E-05 2 83823 90.827 86.361 1 1.0966 1.3463 0 21625000 9713600 11911000 2540 421 1324 1466 4104;4105 4104 HPGSFDVVHVK 11 1 0 Unmodified _HPGSFDVVHVK_ 0 0 0 0 Q96IR1;C9JEH7;A4FU11;Q53HV1;Q496E4;B2R491;P62701;P22090 Q96IR1 Q96IR1 RPS4X;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 410.5554 3 407.884012 1220.63021 93347.68 -0.21698 -8.8501E-05 0.15095 6.1571E-05 -0.066022 -2.693E-05 407.884081121242 410.555357520431 146.91 1.6663 146.91 146.82 148.49 0 549 139 5 0 0 0 0.0051373 1 84758 48.981 46.8 1 1.1095 1.3251 0 13163000 6815100 6347800 2541 421 1324 1466 4106 4106 HPHDIIDDINSGAVECPAS 19 0 0 Unmodified _HPHDIIDDINSGAVECPAS_ 0 0 0 0 Q59FI9;P30050 Q59FI9 Q59FI9 RPL12 60S ribosomal protein L12 ISO-MSMS -1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 683.3135 3 682.977699 2045.91127 NaN NaN NaN -0.15413 -0.00010527 NaN NaN NaN NaN 145.34 0.53915 145.34 145.25 145.79 0 0 0 0 9.3808E-20 1 83788 101.39 89.535 1 2542 982 1325 1467 4107 4107 HPHDIIDDINSGAVECPAS 19 0 0 Unmodified _HPHDIIDDINSGAVECPAS_ 0 0 0 0 Q59FI9;P30050 Q59FI9 Q59FI9 RPL12 60S ribosomal protein L12 ISO-MSMS -1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 682.978 3 682.977699 2045.91127 NaN NaN NaN 0.22698 0.00015502 NaN NaN NaN NaN 146.6 1.1047 146.6 145.73 146.83 1.5259E-05 0 0 0 2.2034E-46 1 84351 128.9 107.23 1 2543 982 1325 1467 4108 4108 HPHDIIDDINSGAVECPAS 19 0 0 Unmodified _HPHDIIDDINSGAVECPAS_ 0 0 0 0 Q59FI9;P30050 Q59FI9 Q59FI9 RPL12 60S ribosomal protein L12 ISO-MSMS -1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 683.313 3 682.977699 2045.91127 NaN NaN NaN 0.12103 8.266E-05 NaN NaN NaN NaN 146.86 1.3169 146.86 146.82 148.14 0 0 0 0 2.0038E-11 1 84735 83.37 61.703 1 2544 982 1325 1467 4109 4109 HPNYSPPGSPIEK 13 1 0 2 Phospho (STY) _HPNYS(ph)PPGS(ph)PIEK_ HPNY(0.009)S(0.991)PPGS(1)PIEK HPNY(-20.47)S(20.47)PPGS(36.67)PIEK 0 0 2 0 Q9UHF7;E5RFF3;H0YAV4 Q9UHF7 Q9UHF7 TRPS1 Zinc finger transcription factor Trps1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 791.8216 2 791.820571 1581.62659 68213.48 1.1588 0.00091757 -0.020587 -1.6302E-05 1.1382 0.00090126 791.820504238731 795.827703633649 55.083 1.7033 55.083 54.313 56.016 0 956 149 9 0 0 0 5.7324E-17 1 33831 127.05 106.76 3 1.5413 1.0175 0 63117000 23889000 39228000 2545 1229 1326 1468 4110 4110 2506;2507 HQALQAEIAGHEPR 14 0 1 Unmodified _HQALQAEIAGHEPR_ 0 0 0 0 B4DTV8;B4DGT1;A0A024R889;A0A0D9SF54;A0A0D9SGF6;Q13813 B4DTV8 B4DTV8 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 519.602 3 519.602456 1555.78554 83569.35 0.36964 0.00019207 0.1295 6.7288E-05 0.49914 0.00025936 519.602475940303 522.93876278928 109.44 0.56159 109.44 109.02 109.58 0 126 44 4 0 0 0 0.0011058 1 64311 59.705 59.705 1 1.6279 2.0096 0 32931000 12048000 20884000 2546 148 1327 1469 4111 4111 HQDVPSQDDSKPTQR 15 1 1 Unmodified _HQDVPSQDDSKPTQR_ 0 0 0 1 Q9NRN7 Q9NRN7 Q9NRN7 AASDHPPT L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 585.9506 3 579.943206 1736.80779 NaN NaN NaN -0.83984 -0.00048706 NaN NaN NaN NaN 65.285 0.27153 65.285 65.149 65.421 0 0 0 0 0.0016065 1 31431 53.861 35.448 1 NaN NaN 0 21053000 0 21053000 2547 1216 1328 1470 4112 4112 HQEEESETEEDEEDTPGHK 19 1 0 Unmodified _HQEEESETEEDEEDTPGHK_ 0 0 0 0 CON__Q5D862;Q5D862 CON__Q5D862 CON__Q5D862 FLG2 Filaggrin-2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 752.633 3 752.300001 2253.87817 NaN NaN NaN -0.26893 -0.00020232 NaN NaN NaN NaN 65.178 0.26102 65.178 65.052 65.313 0 0 0 0 5.3295E-73 2 31245 150.68 125.89 1 NaN NaN 0 21391000 21391000 0 + 2548 760 1329 1471 4113;4114 4113 HQEGEIFDTEK 11 1 0 Unmodified _HQEGEIFDTEK_ 0 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B4DRX3;B2R4K7 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 666.8075 2 666.806956 1331.59936 74357.58 0.71134 0.00047432 0.15951 0.00010636 0.87085 0.00058069 666.80692544337 670.814152039153 88.544 1.3053 88.544 87.593 88.898 0 435 117 5 0 0 0 3.1709E-85 3 48245 196.88 123.63 1 0.96669 1.2148 0 54136000 28805000 25330000 2549 199 1330 1472 4115;4116;4117 4116 HQEGEIFDTEK 11 1 0 Unmodified _HQEGEIFDTEK_ 0 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B4DRX3;B2R4K7 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 670.8147 2 666.806956 1331.59936 74255.98 1.1768 0.00078473 0.011882 7.9229E-06 1.1887 0.00079265 666.806856675692 670.814037418838 90.582 2.4369 90.582 88.864 91.301 0 1084 216 6 0 0 0 4.0773E-119 6 49979 213.81 145.58 1 0.91589 1.1341 0 180900000 83169000 97727000 2550 199 1330 1472 4118;4119;4120;4121;4122;4123 4122 HQEGEIFDTEK 11 1 0 Unmodified _HQEGEIFDTEK_ 0 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B4DRX3;B2R4K7 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 670.8145 2 666.806956 1331.59936 74255.98 1.3963 0.00093103 0.085004 5.6681E-05 1.4813 0.00098771 666.806841195325 670.814082610094 91.174 0.84774 91.174 90.831 91.679 0 239 72 6 0 0 0 2.2256E-85 1 50557 199.08 137.4 1 1.018 1.2623 0 121600000 47714000 73885000 2551 199 1330 1472 4124 4124 HQEGEIFDTEK 11 1 0 Unmodified _HQEGEIFDTEK_ 0 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B4DRX3;B2R4K7 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 670.814 2 666.806956 1331.59936 74357.57 0.4578 0.00030526 0.021815 1.4546E-05 0.47961 0.00031981 666.80684295008 670.813920316834 92.032 0.69738 92.032 91.65 92.348 -7.6294E-06 331 61 7 0 0 0 3.1709E-85 2 51151 196.88 136.44 1 0.95273 1.1828 0 104240000 52423000 51819000 2552 199 1330 1472 4125;4126 4126 HQEGEIFDTEK 11 1 0 Unmodified _HQEGEIFDTEK_ 0 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B4DRX3;B2R4K7 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 666.8076 2 666.806956 1331.59936 74255.97 1.1855 0.00079047 -0.16461 -0.00010976 1.0208 0.0006807 666.806731027527 670.813922468984 92.946 1.1646 92.946 92.257 93.421 0 525 99 6 0 0 0 3.1709E-85 2 51500 196.88 138.28 1 0.92863 1.1503 0 153350000 83574000 69777000 2553 199 1330 1472 4127;4128 4127 HQEGEIFDTEK 11 1 0 Unmodified _HQEGEIFDTEK_ 0 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B4DRX3;B2R4K7 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 666.8072 2 666.806956 1331.59936 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.631 1 87.631 87.131 88.131 0 0 0 0 0.00039392 1 47688 74.944 43.01 1 2554 199 1330 1472 4129 4129 HQEGEIFDTEK 11 1 0 Unmodified _HQEGEIFDTEK_ 0 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B4DRX3;B2R4K7 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 666.808 2 666.806956 1331.59936 NaN NaN NaN -0.57153 -0.0003811 NaN NaN NaN NaN 34.591 1.3443 34.591 33.991 35.336 0 0 0 0 0.00058446 1 18991 81.625 50.203 1 NaN NaN 0 4999300 4999300 0 2555 199 1330 1472 4130 4130 HQEHILR 7 0 1 Unmodified _HQEHILR_ 0 0 0 0 B2R8R5;Q13263 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 314.8427 3 311.506876 931.498798 110008 -0.37068 -0.00011547 0.85007 0.0002648 0.47939 0.00014933 311.506922014089 314.84302706227 114.31 2.2159 114.31 113.19 115.41 0 476 194 4 0 0 0 0.017067 1 67268 50.632 24.03 1 1.7584 2.1591 0 22922000 8141100 14781000 2556 542 1331 1473 4131 4131 HQEHILR 7 0 1 Unmodified _HQEHILR_ 0 0 0 0 B2R8R5;Q13263 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 314.8426 3 311.506876 931.498798 108823.2 -0.27634 -8.6083E-05 0.26285 8.1879E-05 -0.013495 -4.2039E-06 311.50691622236 314.842965282714 116.16 1.7055 116.16 115.57 117.27 0 419 153 5 0 0 0 0.016018 1 68981 52.636 33.906 1 1.519 1.8688 0 24398000 9825500 14573000 2557 542 1331 1473 4132 4132 HQGVMVGMGQK 11 1 0 2 Oxidation (M) _HQGVM(ox)VGM(ox)GQK_ HQGVM(1)VGM(1)GQK HQGVM(52.55)VGM(52.55)GQK 0 2 0 0 B4E335;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;Q562R1;C9JUM1;B4E3A4;P63261;B4DVQ0;I3L3I0;I3L1U9;K7EM38;I3L3R2;J3KT65;A1E282;B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;Q13707;B3KW67;A8K3K1;Q7Z7J6;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1 B4E335;B4E3A4;B7Z6P1 B4E3A4 PS1TP5BP1;ACTB;ACTBL2;ACTG1;ACTA2;ACTG2;ACTA1;ACTC1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Beta-actin-like protein 2;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 606.291 2 602.284082 1202.55361 NaN NaN NaN -0.23628 -0.00014231 NaN NaN NaN NaN 62.116 0.28767 62.116 61.964 62.252 0 0 0 0 0.0035401 1 28866 52.549 31.602 1 NaN NaN 0 19939000 0 19939000 2558 683;685;711 1332 1474 4133 4133 174;175 HQGVMVGMGQK 11 1 0 2 Oxidation (M) _HQGVM(ox)VGM(ox)GQK_ HQGVM(1)VGM(1)GQK HQGVM(62.97)VGM(62.97)GQK 0 2 0 0 B4E335;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;Q562R1;C9JUM1;B4E3A4;P63261;B4DVQ0;I3L3I0;I3L1U9;K7EM38;I3L3R2;J3KT65;A1E282;B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;Q13707;B3KW67;A8K3K1;Q7Z7J6;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1 B4E335;B4E3A4;B7Z6P1 B4E3A4 PS1TP5BP1;ACTB;ACTBL2;ACTG1;ACTA2;ACTG2;ACTA1;ACTC1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Beta-actin-like protein 2;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 602.2842 2 602.284082 1202.55361 NaN NaN NaN -3.3043 -0.0019901 NaN NaN NaN NaN 62.123 0.40915 62.123 61.854 62.263 0 0 0 0 0.0015745 1 28884 62.969 33.16 1 NaN NaN 0 15217000 15217000 0 2559 683;685;711 1332 1474 4134 4134 174;175 HQLGPSLRSPPR 12 0 2 Phospho (STY) _HQLGPSLRS(ph)PPR_ HQLGPS(0.008)LRS(0.992)PPR HQLGPS(-21.01)LRS(21.01)PPR 0 0 1 1 A0A0C4DGG3;B7ZB05;B4DSN4;Q8NHM5 A0A0C4DGG3 A0A0C4DGG3 KDM2B Lysine-specific demethylase 2B MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 482.2494 3 475.576792 1423.70855 NaN NaN NaN NaN NaN NaN NaN NaN NaN 52.13 1 52.13 51.63 52.63 0 0 0 0 0.00050903 1 31628 53.828 40.394 2 2560 323 1333 1475 4135 4135 506 HQLGPSLRSPPR 12 0 2 Phospho (STY) _HQLGPSLRS(ph)PPR_ HQLGPS(0.197)LRS(0.803)PPR HQLGPS(-6.1)LRS(6.1)PPR 0 0 1 1 A0A0C4DGG3;B7ZB05;B4DSN4;Q8NHM5 A0A0C4DGG3 A0A0C4DGG3 KDM2B Lysine-specific demethylase 2B MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 482.2492 3 475.576792 1423.70855 NaN NaN NaN NaN NaN NaN NaN NaN NaN 52.898 1 52.898 52.398 53.398 0 0 0 0 0.0010456 1 32149 51.03 40.677 2 2561 323 1333 1475 4136 4136 506 HQLNELGSESAK 12 1 0 Unmodified _HQLNELGSESAK_ 0 0 0 0 Q6IEH8;Q6KC79 Q6IEH8 Q6IEH8 NIPBL Nipped-B-like protein MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 656.8289 2 656.828223 1311.64189 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.261 1 76.261 75.761 76.761 0 0 0 0 0.0015963 1 39457 56.359 15.33 1 2562 1118 1334 1476 4137 4137 HQPASASSTAASPAHPAK 18 1 0 Unmodified _HQPASASSTAASPAHPAK_ 0 0 0 0 Q96L91 Q96L91 Q96L91 EP400 E1A-binding protein p400 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 575.2921 3 572.620175 1714.8387 88557.36 0.32386 0.00018545 0.087221 4.9945E-05 0.41108 0.00023539 572.954522445813 575.291639135826 65.962 0.21226 65.962 65.838 66.05 0 41 16 4 0 0 0 0.00028061 1 31933 40.186 40.186 1 0.85527 1.0259 0 14729000 7915800 6813500 2563 1184 1335 1477 4138 4138 HQQIPLHSPPSK 12 1 0 Phospho (STY) _HQQIPLHS(ph)PPSK_ HQQIPLHS(0.997)PPS(0.003)K HQQIPLHS(25.68)PPS(-25.68)K 0 0 1 0 E7EX82;Q8NDX5;B4E2T1;C9JAU4;B4DYD1 E7EX82 E7EX82 PHC3 Polyhomeotic-like protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 486.2449 3 483.573048 1447.69731 86870.63 0.35075 0.00016962 -0.16026 -7.7496E-05 0.1905 9.212E-05 483.572802110856 486.244273933122 78.737 1.0095 78.737 78.168 79.178 0 374 88 7 0 0 0 0.001339 1 41065 70.41 65.293 2 1.1543 1.4458 0 60587000 29663000 30924000 2564 796 1336 1478 4139 4139 1367 HQQIPLHSPPSK 12 1 0 Phospho (STY) _HQQIPLHS(ph)PPSK_ HQQIPLHS(0.93)PPS(0.07)K HQQIPLHS(11.23)PPS(-11.23)K 0 0 1 0 E7EX82;Q8NDX5;B4E2T1;C9JAU4;B4DYD1 E7EX82 E7EX82 PHC3 Polyhomeotic-like protein 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 483.5732 3 483.573048 1447.69731 86992.13 0.64311 0.00031099 -0.16049 -7.761E-05 0.48262 0.00023338 483.572961029939 486.244318108085 31.018 2.7174 31.018 30.203 32.92 0 787 204 8 0 0 0 0.0032366 2 16654 59.634 49.041 2 1.8158 1.2063 0 28925000 9332900 19592000 2565 796 1336 1478 4140;4141 4141 1367 HQQIPLHSPPSK 12 1 0 Phospho (STY) _HQQIPLHS(ph)PPSK_ HQQIPLHS(0.985)PPS(0.015)K HQQIPLHS(18.32)PPS(-18.32)K 0 0 1 0 E7EX82;Q8NDX5;B4E2T1;C9JAU4;B4DYD1 E7EX82 E7EX82 PHC3 Polyhomeotic-like protein 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 483.5735 3 483.573048 1447.69731 86813.48 0.56802 0.00027468 -0.015853 -7.6659E-06 0.55217 0.00026702 483.57298851925 486.244419360439 37.884 4.0739 37.884 35.66 39.734 0 1476 353 7 0 0 0 0.0030984 2 22130 61.265 50.984 2 1.7832 1.158 0 36616000 13643000 22973000 2566 796 1336 1478 4142;4143 4143 1367 HQQIPLHSPPSK 12 1 0 Phospho (STY) _HQQIPLHS(ph)PPSK_ HQQIPLHS(0.954)PPS(0.046)K HQQIPLHS(13.17)PPS(-13.17)K 0 0 1 0 E7EX82;Q8NDX5;B4E2T1;C9JAU4;B4DYD1 E7EX82 E7EX82 PHC3 Polyhomeotic-like protein 3 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 483.5732 3 483.573048 1447.69731 NaN NaN NaN -0.039912 -1.93E-05 NaN NaN NaN NaN 32.247 0.55111 32.247 31.953 32.504 0 0 0 0 0.0048677 1 17258 51.265 40.411 2 NaN NaN 0 4184200 4184200 0 2567 796 1336 1478 4144 4144 1367 HQQIPLHSPPSK 12 1 0 Phospho (STY) _HQQIPLHS(ph)PPSK_ HQQIPLHS(0.957)PPS(0.043)K HQQIPLHS(13.52)PPS(-13.52)K 0 0 1 0 E7EX82;Q8NDX5;B4E2T1;C9JAU4;B4DYD1 E7EX82 E7EX82 PHC3 Polyhomeotic-like protein 3 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 483.5736 3 483.573048 1447.69731 NaN NaN NaN NaN NaN NaN NaN NaN NaN 32.87 1 32.87 32.37 33.37 0 0 0 0 0.0019797 1 17859 50.608 33.942 2 2568 796 1336 1478 4145 4145 1367 HQQIPLHSPPSK 12 1 0 Phospho (STY) _HQQIPLHS(ph)PPSK_ HQQIPLHS(0.964)PPS(0.036)K HQQIPLHS(14.23)PPS(-14.23)K 0 0 1 0 E7EX82;Q8NDX5;B4E2T1;C9JAU4;B4DYD1 E7EX82 E7EX82 PHC3 Polyhomeotic-like protein 3 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 483.5734 3 483.573048 1447.69731 NaN NaN NaN NaN NaN NaN NaN NaN NaN 37.015 1 37.015 36.515 37.515 0 0 0 0 0.0023331 1 21034 49.559 38.901 2 2569 796 1336 1478 4146 4146 1367 HQSFVLVGETGSGK 14 1 0 Unmodified _HQSFVLVGETGSGK_ 0 0 0 0 B4E0S6;O43143 B4E0S6 B4E0S6 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 727.3812 2 723.372798 1444.73104 70949.6 0.93214 0.00067429 0.25718 0.00018603 1.1893 0.00086032 723.373780489268 727.379870366105 107.79 0.69143 107.79 107.46 108.15 0 187 50 5 0 0 0 1.5593E-17 2 62915 117.7 117.7 1 0.99091 1.2485 0 29774000 15181000 14593000 2570 677 1337 1479 4147;4148 4147 HQSSPDLSSEESETEK 16 1 0 Phospho (STY) _HQS(ph)SPDLSSEESETEK_ HQS(0.565)S(0.434)PDLS(0.001)S(0.001)EESETEK HQS(1.15)S(-1.15)PDLS(-30.07)S(-29.41)EES(-38.35)ET(-37.26)EK 0 0 1 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 935.3746 2 935.372932 1868.73131 63564.49 0.81761 0.00076477 0.096605 9.0362E-05 0.91421 0.00085513 935.372952786766 939.380176581571 26.606 0.41548 26.606 26.414 26.83 0 124 19 9 0 0 0 0.00025682 1 12647 49.463 49.463 6 1.5704 1.0245 0 44095000 16586000 27509000 2571 1120 1338 1480 4149 4149 2128 HQVEYLGLK 9 1 0 Unmodified _HQVEYLGLK_ 0 0 0 0 B0I1T1;Q6ZNI9;Q4KMR3;Q4LE34;O00160;Q12965 B0I1T1 B0I1T1 FLJ00395;MYO1E;MYO1F variant protein;MYO1F Unconventional myosin-If;Unconventional myosin-Ie MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 543.8018 2 543.800749 1085.58694 90897.96 0.506 0.00027516 0.01916 1.0419E-05 0.52516 0.00028558 544.302446533762 547.807784326756 110 0.48907 110 109.77 110.25 0 101 40 4 0 0 0 0.0075894 2 64788 70.919 38.078 1 0.92659 1.0993 0 10394000 5806200 4587600 2572 515 1339 1481 4150;4151 4151 HQVIQTVHPVEK 12 1 0 Unmodified _HQVIQTVHPVEK_ 0 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 472.2651 3 472.264892 1413.77285 NaN NaN NaN 0.20653 9.7535E-05 NaN NaN NaN NaN 98.009 0.47157 98.009 97.798 98.27 0 0 0 0 5.4991E-16 1 55591 104.17 80.425 1 NaN NaN 0 17927000 17927000 0 2573 552 1340 1482 4152 4152 HQVIQTVHPVEK 12 1 0 Unmodified _HQVIQTVHPVEK_ 0 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 472.265 3 472.264892 1413.77285 NaN NaN NaN -0.42389 -0.00020019 NaN NaN NaN NaN 98.619 1.0107 98.619 98.223 99.234 0 0 0 0 0.0036411 1 56202 68.463 46.232 1 NaN NaN 0 13969000 13969000 0 2574 552 1340 1482 4153 4153 HQVIQTVHPVEK 12 1 0 Unmodified _HQVIQTVHPVEK_ 0 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 474.9368 3 472.264892 1413.77285 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.477 1 97.477 96.977 97.977 0 0 0 0 0.013693 1 55170 48.044 38.557 1 2575 552 1340 1482 4154 4154 HQVIQTVHPVEK 12 1 0 Unmodified _HQVIQTVHPVEK_ 0 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 474.9371 3 472.264892 1413.77285 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.629 1 97.629 97.129 98.129 0 0 0 0 0.00033466 1 55288 69.03 56.022 1 2576 552 1340 1482 4155 4155 HQVIQTVHPVEK 12 1 0 Unmodified _HQVIQTVHPVEK_ 0 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 474.9369 3 472.264892 1413.77285 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.11 1 98.11 97.61 98.61 0 0 0 0 0.00069214 1 55665 64.224 47.847 1 2577 552 1340 1482 4156 4156 HQVIQTVHPVEK 12 1 0 Unmodified _HQVIQTVHPVEK_ 0 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 474.9361 3 472.264892 1413.77285 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.259 1 98.259 97.759 98.759 0 0 0 0 0.0215 1 55778 97.463 83.017 1 2578 552 1340 1482 4157 4157 HRDFVAEPMGEK 12 1 1 Oxidation (M) _HRDFVAEPM(ox)GEK_ HRDFVAEPM(1)GEK HRDFVAEPM(54.87)GEK 0 1 0 1 A0A024R5H0;O75531;E9PJJ8 A0A024R5H0 A0A024R5H0 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 477.8958 3 477.894359 1430.66125 86321.17 0.57233 0.00027351 -0.32182 -0.0001538 0.25051 0.00011972 477.894250223421 483.901722448369 104.92 4.4837 104.92 102.09 106.57 0 1255 317 7 0 0 0 0.015874 3 59554 54.871 40.841 1 1.0096 1.2045 0 93387000 47089000 46297000 2579 107 1341 1483 4158;4159;4160 4158 21 HRDFVAEPMGEK 12 1 1 Oxidation (M) _HRDFVAEPM(ox)GEK_ HRDFVAEPM(1)GEK HRDFVAEPM(49.48)GEK 0 1 0 1 A0A024R5H0;O75531;E9PJJ8 A0A024R5H0 A0A024R5H0 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 483.9019 3 477.894359 1430.66125 86399.72 0.424 0.00020263 -0.32393 -0.0001548 0.10008 4.7826E-05 477.894193121109 483.901629429472 107.06 2.4907 107.06 106.16 108.65 0 848 192 6 0 0 0 0.018995 2 62431 49.482 33.866 1 1.0032 1.1909 0 63543000 32301000 31242000 2580 107 1341 1483 4161;4162 4162 21 HRDFVAEPMGEK 12 1 1 Oxidation (M) _HRDFVAEPM(ox)GEK_ HRDFVAEPM(1)GEK HRDFVAEPM(45.79)GEK 0 1 0 1 A0A024R5H0;O75531;E9PJJ8 A0A024R5H0 A0A024R5H0 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 483.9018 3 477.894359 1430.66125 NaN NaN NaN -0.11892 -5.6829E-05 NaN NaN NaN NaN 103.1 1.3786 103.1 101.93 103.31 0 0 0 0 0.0069924 1 59616 45.79 30.251 1 NaN NaN 0 33431000 0 33431000 2581 107 1341 1483 4163 4163 21 HRPSPPATPPPK 12 1 1 2 Phospho (STY) _HRPS(ph)PPAT(ph)PPPK_ HRPS(1)PPAT(1)PPPK HRPS(58.98)PPAT(58.98)PPPK 0 0 2 1 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3;E9PCT1;M0R088 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 481.2179 3 481.217815 1440.63162 86798.02 0.44316 0.00021325 -0.090359 -4.3482E-05 0.3528 0.00016977 481.217732599763 487.225264208486 56.692 1.6177 56.692 56.084 57.702 0 686 133 6 0 0 0 0.012712 2 24588 58.98 52.947 1 0.87618 1.0391 0 59045000 35119000 23926000 2582 353 1342 1484 4164;4165 4165 550;2693 HRPSPPATPPPK 12 1 1 2 Phospho (STY) _HRPS(ph)PPAT(ph)PPPK_ HRPS(1)PPAT(1)PPPK HRPS(55.59)PPAT(55.59)PPPK 0 0 2 1 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3;E9PCT1;M0R088 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 487.2254 3 481.217815 1440.63162 86303.62 0.41372 0.00019909 -0.16893 -8.1292E-05 0.24479 0.0001178 481.21771419561 487.225220628717 19.221 1.3187 19.221 18.677 19.996 1.9073E-06 365 61 9 0 0 0 0.013821 1 6188 55.589 52.167 1 0.40509 0.31273 0 103010000 72830000 30177000 2583 353 1342 1484 4166 4166 550;2693 HRPSPPATPPPK 12 1 1 2 Phospho (STY) _HRPS(ph)PPAT(ph)PPPK_ HRPS(1)PPAT(1)PPPK HRPS(65.81)PPAT(65.81)PPPK 0 0 2 1 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3;E9PCT1;M0R088 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 721.3229 2 721.323084 1440.63162 NaN NaN NaN -0.067024 -4.8346E-05 NaN NaN NaN NaN 19.226 1.0651 19.226 18.741 19.806 1.9073E-06 0 0 0 0.0090392 1 6396 65.805 41.954 1 NaN NaN 0 20019000 20019000 0 2584 353 1342 1484 4167 4167 550;2693 HRPSPPATPPPK 12 1 1 Phospho (STY) _HRPS(ph)PPATPPPK_ HRPS(1)PPATPPPK HRPS(45.32)PPAT(-45.32)PPPK 0 0 1 1 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3;E9PCT1;M0R088 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 460.57 3 454.562371 1360.66528 89779.31 0.0026787 1.2177E-06 0.074083 3.3675E-05 0.076762 3.4893E-05 454.562355679939 460.569895499633 66.344 0.63713 66.344 66.061 66.699 0 213 45 7 0 0 0 0.0001105 2 32284 86.548 78.035 2 0.79442 0.94283 0 62469000 34088000 28381000 2585 353 1342 1485 4168;4169 4169 550;2693 HRPSPPATPPPK 12 1 1 Phospho (STY) _HRPSPPAT(ph)PPPK_ HRPSPPAT(1)PPPK HRPS(-35.22)PPAT(35.22)PPPK 0 0 1 1 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3;E9PCT1;M0R088 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 460.5699 3 454.562371 1360.66528 88001.73 0.34379 0.00015627 0.12888 5.8585E-05 0.47267 0.00021486 454.562391411874 460.569882327964 17.245 0.84628 17.245 16.81 17.656 0 169 31 9 0 0 0 0.0016617 2 4401 68.481 59.862 2 0.65363 0.50215 0 29589000 17647000 11942000 2586 353 1342 1485 4170;4171 4171 550;2693 HRPSPPATPPPK 12 1 1 Phospho (STY) _HRPS(ph)PPATPPPK_ HRPS(0.998)PPAT(0.002)PPPK HRPS(26.16)PPAT(-26.16)PPPK 0 0 1 1 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3;E9PCT1;M0R088 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 460.5699 3 454.562371 1360.66528 87335.88 0.1538 6.9909E-05 -0.20398 -9.2721E-05 -0.050184 -2.2812E-05 454.562360611915 460.569712828556 19.009 0.87787 19.009 18.566 19.444 0 256 39 10 0 0 0 0.0025854 2 5968 62.055 58.753 2 0.4368 0.33763 0 213220000 148110000 65115000 2587 353 1342 1485 4172;4173 4173 550;2693 HRPSPPATPPPK 12 1 1 Phospho (STY) _HRPS(ph)PPATPPPK_ HRPS(0.959)PPAT(0.041)PPPK HRPS(13.72)PPAT(-13.72)PPPK 0 0 1 1 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3;E9PCT1;M0R088 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 681.3408 2 681.339919 1360.66528 73257.73 0.74025 0.00050436 0.028735 1.9579E-05 0.76899 0.00052394 681.339883851556 690.351189960254 19.011 0.63913 19.011 18.697 19.336 0 166 28 9 0 0 0 0.0042094 2 5995 65.563 61.111 2 0.42247 0.32583 0 58751000 40417000 18334000 2588 353 1342 1485 4174;4175 4174 550;2693 HRPSPPATPPPK 12 1 1 Unmodified _HRPSPPATPPPK_ 0 0 0 1 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3;E9PCT1;M0R088 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 434.5577 3 427.906928 1280.69895 93208.88 -0.011857 -5.0738E-06 -0.13233 -5.6626E-05 -0.14419 -6.17E-05 427.906984906811 433.914334777921 82.702 0.52869 82.702 82.376 82.905 0 119 51 4 0 0 0 0.032744 1 44185 34.183 34.183 1 1.4136 1.6273 0 25760000 8282500 17477000 2589 353 1342 1486 4176 4176 HSGPNSADSANDGFVR 16 0 1 Unmodified _HSGPNSADSANDGFVR_ 0 0 0 0 B4DKS8;A0A024R7T3;P52597 B4DKS8 B4DKS8 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 544.5798 3 544.244997 1629.71316 81713.31 0.58288 0.00031723 0.054044 2.9413E-05 0.63692 0.00034664 544.244981956524 547.58106177395 77.671 0.71223 77.671 77.413 78.126 0 288 63 6 0 0 0 7.2789E-37 2 40507 112.03 103.86 1 1.644 2.0739 0 67671000 23158000 44513000 2590 140 1343 1487 4177;4178 4178 HSGPNSADSANDGFVR 16 0 1 Unmodified _HSGPNSADSANDGFVR_ 0 0 0 0 B4DKS8;A0A024R7T3;P52597 B4DKS8 B4DKS8 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 821.3685 2 815.863857 1629.71316 70116.23 0.86535 0.00070601 -0.3892 -0.00031754 0.47615 0.00038847 816.364002692257 820.868208510699 77.699 0.63538 77.699 77.433 78.068 0 174 56 5 0 0 0 0.0025808 1 40414 56.122 48.477 1 1.7138 2.1122 0 32150000 9979100 22170000 2591 140 1343 1487 4179 4179 HSGPNSADSANDGFVR 16 0 1 Unmodified _HSGPNSADSANDGFVR_ 0 0 0 0 B4DKS8;A0A024R7T3;P52597 B4DKS8 B4DKS8 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 815.8631 2 815.863857 1629.71316 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.594 1 77.594 77.094 78.094 0 0 0 0 4.1374E-06 1 40484 67.997 51.365 1 2592 140 1343 1487 4180 4180 HSIAQLDPEALGNIK 15 1 0 Phospho (STY) _HS(ph)IAQLDPEALGNIK_ HS(1)IAQLDPEALGNIK HS(77.59)IAQLDPEALGNIK 0 0 1 0 Q53HL2;A8K7A2 Q53HL2 Q53HL2 CDCA8 Borealin MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 847.4239 2 843.416552 1684.81855 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.21 1 109.21 108.71 109.71 0 0 0 0 4.9642E-06 1 64177 77.593 60.568 1 2593 1090 1344 1488 4181 4181 2054 HSLYTAELITVPFDSESPIR 20 0 1 Phospho (STY) _HSLYTAELITVPFDSES(ph)PIR_ HSLYTAELITVPFDS(0.183)ES(0.817)PIR HS(-98.79)LY(-104.95)T(-93.74)AELIT(-57.14)VPFDS(-6.5)ES(6.5)PIR 0 0 1 0 H0UIC2;A0A075B754;Q96QE3 H0UIC2 H0UIC2 ATAD5 ATPase family AAA domain-containing protein 5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 789.3848 3 785.713791 2354.11954 68899.41 0.7452 0.00058551 0.333 0.00026164 1.0782 0.00084716 786.048253335419 789.384508607904 145.52 0.29547 145.52 145.31 145.61 0 50 7 10 0 0 0 6.085E-29 2 83898 112.85 104.14 6 1.7767 2.2076 0 36157000 13737000 22420000 2594 241 1345 1489 4182;4183 4182 370;371 HSLYTAELITVPFDSESPIR 20 0 1 Phospho (STY) _HSLYTAELITVPFDS(ph)ESPIR_ HSLYTAELIT(0.001)VPFDS(0.499)ES(0.499)PIR HS(-49.56)LY(-55.7)T(-49.95)AELIT(-25.63)VPFDS(0)ES(0)PIR 0 0 1 0 H0UIC2;A0A075B754;Q96QE3 H0UIC2 H0UIC2 ATAD5 ATPase family AAA domain-containing protein 5 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 789.0508 3 785.713791 2354.11954 68004.21 1.0609 0.00083354 -0.19207 -0.00015092 0.8688 0.00068263 786.048144191615 789.384090454459 134.52 0.26318 134.52 134.42 134.68 0 90 12 13 0 0 0 1.2886E-07 2 86779 59.429 50.72 6 4.0487 2.728 0 88696000 14958000 73738000 2595 241 1345 1489 4184;4185 4184 370;371 HSLYTAELITVPFDSESPIR 20 0 1 Phospho (STY) _HSLYTAELITVPFDS(ph)ESPIR_ HSLYTAELIT(0.005)VPFDS(0.587)ES(0.408)PIR HS(-71.5)LY(-80.28)T(-63.06)AELIT(-21)VPFDS(1.58)ES(-1.58)PIR 0 0 1 0 H0UIC2;A0A075B754;Q96QE3 H0UIC2 H0UIC2 ATAD5 ATPase family AAA domain-containing protein 5 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1183.574 2 1178.06705 2354.11954 55254.94 0.50857 0.00059913 0.37064 0.00043664 0.87921 0.0010358 1178.56932940611 1183.57291618123 134.52 0.19847 134.52 134.43 134.63 0 55 9 11 0 0 0 1.0896E-13 2 86821 84.829 84.829 6 3.6186 2.4525 0 66214000 14346000 51868000 2596 241 1345 1489 4186;4187 4186 370;371 HSPIAPSSPSPQVLAQK 17 1 0 2 Phospho (STY) _HS(ph)PIAPS(ph)SPSPQVLAQK_ HS(1)PIAPS(0.606)S(0.394)PSPQVLAQK HS(91.45)PIAPS(1.87)S(-1.87)PS(-32.6)PQVLAQK 0 0 2 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 956.4475 2 952.439373 1902.86419 62425.56 0.68861 0.00065586 -0.064858 -6.1773E-05 0.62375 0.00059408 952.439214754136 956.446439548027 79.421 1.6031 79.421 78.749 80.352 0 1022 144 10 0 0 0 5.8817E-116 4 42032 197.75 157.6 6 1.0735 1.3254 0 684270000 339990000 344270000 2597 1212 1346 1490 4188;4189;4190;4191 4191 2422;2423;2424;2425 HSPIAPSSPSPQVLAQK 17 1 0 2 Phospho (STY) _HS(ph)PIAPSS(ph)PSPQVLAQK_ HS(0.998)PIAPS(0.287)S(0.648)PS(0.067)PQVLAQK HS(28.76)PIAPS(-3.55)S(3.55)PS(-9.92)PQVLAQK 0 0 2 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 637.9666 3 635.295341 1902.86419 75857.32 0.74645 0.00047422 -0.12764 -8.1088E-05 0.61881 0.00039313 635.295265946154 637.966686073288 79.424 1.1997 79.424 78.85 80.049 0 455 107 8 0 0 0 3.7595E-05 2 41666 58.755 48.474 6 1.1134 1.3792 0 149530000 74190000 75338000 2598 1212 1346 1490 4192;4193 4192 2422;2423;2424;2425 HSPIAPSSPSPQVLAQK 17 1 0 2 Phospho (STY) _HSPIAPSS(ph)PS(ph)PQVLAQK_ HSPIAPS(0.011)S(0.989)PS(1)PQVLAQK HS(-116.74)PIAPS(-19.54)S(19.54)PS(36.28)PQVLAQK 0 0 2 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 952.4404 2 952.439373 1902.86419 62551.89 0.63035 0.00060037 0.071581 6.8176E-05 0.70193 0.00066854 952.439246590633 956.446646387148 87.52 1.8365 87.52 86.574 88.41 0 1063 169 8 0 0 0 1.342E-195 6 47538 234.04 203.83 6 1.1943 1.4788 0 185310000 82209000 103100000 2599 1212 1346 1490 4194;4195;4196;4197;4198;4199 4196 2422;2423;2424;2425 HSPIAPSSPSPQVLAQK 17 1 0 2 Phospho (STY) _HSPIAPS(ph)S(ph)PSPQVLAQK_ HS(0.002)PIAPS(0.695)S(0.695)PS(0.608)PQVLAQK HS(-28.22)PIAPS(1.09)S(1.09)PS(-1.09)PQVLAQK 0 0 2 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 635.2957 3 635.295341 1902.86419 75913.63 0.72705 0.00046189 -0.010229 -6.4986E-06 0.71682 0.00045539 635.629585873123 637.966793903106 87.145 0.58337 87.145 86.689 87.272 0 129 55 4 0 0 0 0.00065479 1 47186 40.237 31.194 6 1.1989 1.5204 0 36032000 14863000 21169000 2600 1212 1346 1490 4200 4200 2422;2423;2424;2425 HSPIAPSSPSPQVLAQK 17 1 0 2 Phospho (STY) _HS(ph)PIAPSS(ph)PSPQVLAQK_ HS(1)PIAPS(0.012)S(0.988)PS(0.001)PQVLAQK HS(84.85)PIAPS(-19.34)S(19.34)PS(-30.73)PQVLAQK 0 0 2 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 956.447 2 952.439373 1902.86419 62136.87 0.83037 0.00079087 0.13173 0.00012546 0.9621 0.00091634 952.439664130456 956.446592616639 81.371 1.56 81.371 80.896 82.456 0 1110 144 13 0 0 0 6.9414E-173 3 52364 224.15 189.05 6 1.7983 1.1995 0 573590000 207010000 366580000 2601 1212 1346 1490 4201;4202;4203 4203 2422;2423;2424;2425 HSPIAPSSPSPQVLAQK 17 1 0 2 Phospho (STY) _HSPIAPSS(ph)PS(ph)PQVLAQK_ HSPIAPS(0.013)S(0.987)PS(1)PQVLAQK HS(-121.2)PIAPS(-18.72)S(18.72)PS(53.99)PQVLAQK 0 0 2 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 956.4477 2 952.439373 1902.86419 61160.95 0.97109 0.0009249 0.23892 0.00022756 1.21 0.0011525 952.440202408295 956.44658217683 89.764 2.4749 89.764 88.877 91.351 7.6294E-06 1723 237 11 0 0 0 2.3755E-100 2 57886 186.43 162.24 6 2.6353 1.7588 0 403650000 111910000 291740000 2602 1212 1346 1490 4204;4205 4204 2422;2423;2424;2425 HSPIAPSSPSPQVLAQK 17 1 0 Phospho (STY) _HS(ph)PIAPSSPSPQVLAQK_ HS(1)PIAPSSPSPQVLAQK HS(60.52)PIAPS(-60.52)S(-66.45)PS(-78.86)PQVLAQK 0 0 1 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 916.4642 2 912.456208 1822.89786 65484.23 0.70869 0.00064665 0.23417 0.00021367 0.94287 0.00086032 912.957904580571 916.463381102881 81.015 1.3553 81.015 80.412 81.767 -7.6294E-06 495 125 7 0 0 0 6.5991E-37 4 43224 132.84 106.43 4 1.2184 1.5413 0 44531000 18011000 26520000 2603 1212 1346 1491 4206;4207;4208;4209 4208 2422;2423;2424;2425 HSPIAPSSPSPQVLAQK 17 1 0 Phospho (STY) _HS(ph)PIAPSSPSPQVLAQK_ HS(1)PIAPSSPSPQVLAQK HS(36.3)PIAPS(-36.3)S(-42.58)PS(-66.46)PQVLAQK 0 0 1 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 611.3116 3 608.639898 1822.89786 77138.98 0.72072 0.00043866 -0.056621 -3.4462E-05 0.6641 0.0004042 608.639870063663 611.311186491144 81.031 1.8733 81.031 80.261 82.135 0 880 172 7 0 0 0 1.2233E-09 3 43058 82.765 73.108 4 1.1311 1.4037 0 109010000 51345000 57664000 2604 1212 1346 1491 4210;4211;4212 4210 2422;2423;2424;2425 HSPIAPSSPSPQVLAQK 17 1 0 Phospho (STY) _HSPIAPSS(ph)PSPQVLAQK_ HSPIAPS(0.136)S(0.846)PS(0.018)PQVLAQK HS(-70.21)PIAPS(-7.95)S(7.95)PS(-16.71)PQVLAQK 0 0 1 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 912.9587 2 912.456208 1822.89786 64828.5 0.53758 0.00049052 0.074563 6.8036E-05 0.61215 0.00055856 912.456188480733 916.463400972074 87.869 1.3431 87.869 87.114 88.457 0 547 122 8 0 0 0 2.7324E-12 2 47900 97.417 88.904 4 1.2446 1.5512 0 72321000 33219000 39102000 2605 1212 1346 1491 4213;4214 4214 2422;2423;2424;2425 HSPIAPSSPSPQVLAQK 17 1 0 Phospho (STY) _HSPIAPSS(ph)PSPQVLAQK_ HS(0.002)PIAPS(0.341)S(0.653)PS(0.004)PQVLAQK HS(-24.86)PIAPS(-2.82)S(2.82)PS(-22.63)PQVLAQK 0 0 1 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 611.3116 3 608.639898 1822.89786 77390.7 0.5529 0.00033651 0.17981 0.00010944 0.73271 0.00044596 608.639787407846 611.64567326733 87.861 1.5264 87.861 86.951 88.477 0 459 140 6 0 0 0 9.3432E-06 2 47816 68.944 57.301 4 1.2481 1.5634 0 60552000 28408000 32144000 2606 1212 1346 1491 4215;4216 4215 2422;2423;2424;2425 HSPIAPSSPSPQVLAQK 17 1 0 Phospho (STY) _HSPIAPS(ph)SPSPQVLAQK_ HSPIAPS(0.458)S(0.458)PS(0.083)PQVLAQK HS(-50.64)PIAPS(0)S(0)PS(-7.42)PQVLAQK 0 0 1 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 916.4625 2 912.456208 1822.89786 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.254 1 87.254 86.754 87.754 0 0 0 0 2.0393E-06 1 47407 84.479 59.688 4 2607 1212 1346 1491 4217 4217 2422;2423;2424;2425 HSPIAPSSPSPQVLAQK 17 1 0 Phospho (STY) _HS(ph)PIAPSSPSPQVLAQK_ HS(1)PIAPSSPSPQVLAQK HS(55.37)PIAPS(-55.37)S(-60.19)PS(-70.09)PQVLAQK 0 0 1 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 916.4632 2 912.456208 1822.89786 65025.35 1.0269 0.00093696 -0.24139 -0.00022026 0.78547 0.0007167 912.455672249848 916.462921776063 74.48 1.4402 74.48 74.009 75.449 0 723 128 9 0 0 0 3.4127E-16 1 47156 103.01 86.854 4 2.3164 1.5366 0 77210000 25152000 52058000 2608 1212 1346 1491 4218 4218 2422;2423;2424;2425 HSPIAPSSPSPQVLAQK 17 1 0 Phospho (STY) _HS(ph)PIAPSSPSPQVLAQK_ HS(0.985)PIAPS(0.013)S(0.002)PSPQVLAQK HS(18.72)PIAPS(-18.72)S(-27.11)PS(-42.95)PQVLAQK 0 0 1 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 611.3119 3 608.639898 1822.89786 78016.89 0.94021 0.00057225 -0.042163 -2.5662E-05 0.89805 0.00054659 608.639958547072 611.311226777991 74.433 1.8461 74.433 73.936 75.782 7.6294E-06 990 160 10 0 0 0 0.00010539 1 47562 46.701 42.53 4 2.1136 1.4132 0 132780000 41693000 91091000 2609 1212 1346 1491 4219 4219 2422;2423;2424;2425 HSPIAPSSPSPQVLAQK 17 1 0 Phospho (STY) _HSPIAPSS(ph)PSPQVLAQK_ HSPIAPS(0.2)S(0.795)PS(0.005)PQVLAQK HS(-86.55)PIAPS(-5.99)S(5.99)PS(-21.92)PQVLAQK 0 0 1 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 912.4594 2 912.456208 1822.89786 64097.18 1.1426 0.0010426 0.12388 0.00011303 1.2665 0.0011557 912.95763883316 916.463424193269 79.453 2.1395 79.453 78.809 80.948 0 1153 203 8 0 0 0 1.9805E-31 2 50715 128.74 113.4 4 2.4658 1.6483 0 124650000 34770000 89884000 2610 1212 1346 1491 4220;4221 4221 2422;2423;2424;2425 HSPIAPSSPSPQVLAQK 17 1 0 3 Phospho (STY) _HS(ph)PIAPSS(ph)PS(ph)PQVLAQK_ HS(1)PIAPS(0.16)S(0.84)PS(1)PQVLAQK HS(62.46)PIAPS(-7.21)S(7.21)PS(35.06)PQVLAQK 0 0 3 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 996.4302 2 992.422539 1982.83052 60851.3 0.58755 0.0005831 0.025135 2.4945E-05 0.61269 0.00060805 992.923914340128 996.429578367455 81.238 1.4042 81.238 80.64 82.044 0 990 128 10 0 0 0 9.727E-31 3 43427 127.83 105.74 4 0.84091 1.0375 0 945120000 524180000 420940000 2611 1212 1346 1492 4222;4223;4224 4224 2422;2423;2424;2425 HSPIAPSSPSPQVLAQK 17 1 0 3 Phospho (STY) _HS(ph)PIAPSS(ph)PS(ph)PQVLAQK_ HS(1)PIAPS(0.183)S(0.82)PS(0.997)PQVLAQK HS(61.02)PIAPS(-6.58)S(6.58)PS(24.93)PQVLAQK 0 0 3 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 996.4301 2 992.422539 1982.83052 60059.85 0.53593 0.00053187 0.47463 0.00047103 1.0106 0.0010029 992.423748968244 996.429930329163 88.475 2.259 88.475 87.894 90.153 0 1519 217 12 0 0 0 2.7122E-09 1 57179 84.653 68.534 4 1.7222 1.148 0 852050000 309830000 542220000 2612 1212 1346 1492 4225 4225 2422;2423;2424;2425 HSPSPPPPTPTESR 14 0 1 2 Phospho (STY) _HS(ph)PS(ph)PPPPTPTESR_ HS(0.999)PS(0.999)PPPPT(0.001)PT(0.001)ES(0.001)R HS(36.31)PS(36.31)PPPPT(-36.31)PT(-36.31)ES(-36.31)R 0 0 2 0 Q58EY4;Q92922;Q05BW5;Q05CR1;B4DYQ1 Q58EY4 Q58EY4 SMARCC1 SWI/SNF complex subunit SMARCC1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 552.8953 3 549.558565 1645.65387 82352.45 0.59835 0.00032883 -0.034003 -1.8687E-05 0.56435 0.00031014 549.558462193218 552.89462416243 41.871 0.83014 41.871 41.485 42.315 0 375 69 7 0 0 0 0.0018737 1 14912 47.754 43.81 10 0.79413 0.86777 0 5605400 3375900 2229400 2613 1092 1347 1493 4226 4226 2056;2057 HSPSPPPPTPTESR 14 0 1 Phospho (STY) _HSPS(ph)PPPPTPTESR_ HS(0.256)PS(0.742)PPPPT(0.001)PTESR HS(-4.62)PS(4.62)PPPPT(-28.99)PT(-35.4)ES(-35.09)R 0 0 1 0 Q58EY4;Q92922;Q05BW5;Q05CR1;B4DYQ1 Q58EY4 Q58EY4 SMARCC1 SWI/SNF complex subunit SMARCC1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 522.9041 3 522.903122 1565.68754 83757.52 0.69479 0.00036331 0.092511 4.8374E-05 0.7873 0.00041168 522.903119858517 526.239332608228 25.353 0.59286 25.353 25.058 25.651 0 153 30 7 0 0 0 0.0022991 1 11612 41.367 36.566 5 2.3185 1.7561 0 19412000 5938400 13474000 2614 1092 1347 1494 4227 4227 2056;2057 HSQAVEELAEQLEQTK 16 1 0 Unmodified _HSQAVEELAEQLEQTK_ 0 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 616.6459 3 613.974283 1838.90102 NaN NaN NaN -0.37318 -0.00022912 NaN NaN NaN NaN 132.48 0.31017 132.48 132.32 132.63 0 0 0 0 9.3731E-06 1 80627 69.805 58.43 1 NaN NaN 0 1940000 0 1940000 2615 49 1348 1495 4228 4228 HSQAVEELAEQLEQTK 16 1 0 Unmodified _HSQAVEELAEQLEQTK_ 0 0 0 0 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 616.6464 3 613.974283 1838.90102 NaN NaN NaN -1.1929 -0.00073244 NaN NaN NaN NaN 146.68 0.22636 146.68 146.55 146.77 0 0 0 0 6.2703E-06 1 84598 72.433 61.84 1 NaN NaN 0 2905700 0 2905700 2616 49 1348 1495 4229 4229 HSQELPAILDDTTLSGSDR 19 0 1 Unmodified _HSQELPAILDDTTLSGSDR_ 0 0 0 0 Q15021;B4E0B7;B3KMS0;F5GZK7;A0PJ76 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 689.3426 3 685.671152 2053.99163 74461.82 0.99802 0.00068431 1.1881 0.00081465 2.1861 0.001499 686.006826382082 689.007444127073 133.58 0.40181 133.58 133.24 133.64 0 69 19 6 0 0 0 3.7161E-10 2 81404 69.361 54.666 1 0.84203 1.0355 0 26460000 15822000 10639000 2617 1067 1349 1496 4230;4231 4231 HSQELPAILDDTTLSGSDR 19 0 1 Unmodified _HSQELPAILDDTTLSGSDR_ 0 0 0 0 Q15021;B4E0B7;B3KMS0;F5GZK7;A0PJ76 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 689.0068 3 685.671152 2053.99163 69068.16 0.53454 0.00036652 -0.59813 -0.00041012 -0.063597 -4.3607E-05 686.005568231619 689.340239146058 145.97 0.27817 145.97 145.81 146.09 0 65 19 5 0 0 0 3.2663E-10 3 84216 64.83 64.83 1 0.53377 0.5755 0 2365700 1392100 973540 2618 1067 1349 1496 4232;4233;4234 4232 HSQELPAILDDTTLSGSDR 19 0 1 Unmodified _HSQELPAILDDTTLSGSDR_ 0 0 0 0 Q15021;B4E0B7;B3KMS0;F5GZK7;A0PJ76 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 686.0057 3 685.671152 2053.99163 71741.77 1.1208 0.00076851 -0.3242 -0.0002223 0.79662 0.00054622 686.00470554806 689.007215479903 111.35 0.49554 111.35 111.12 111.62 0 141 47 5 0 0 0 0.0023028 1 71634 30.21 30.21 1 1.6173 1.2904 0 12633000 5002600 7630700 2619 1067 1349 1496 4235 4235 HSQYHVDGSLEK 12 1 0 Unmodified _HSQYHVDGSLEK_ 0 0 0 0 Q96HS1 Q96HS1 Q96HS1 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 469.8973 3 467.224874 1398.65279 94017.3 0.87696 0.00040974 -0.08917 -4.1662E-05 0.78779 0.00036807 467.224698901623 469.896160317843 99.727 1.0718 99.727 99.099 100.17 0 192 90 4 0 0 0 0.018338 1 56678 30.308 24.806 1 1.8594 2.2938 0 23170000 5153600 18017000 2620 1178 1350 1497 4236 4236 HSQYHVDGSLEK 12 1 0 Unmodified _HSQYHVDGSLEK_ 0 0 0 0 Q96HS1 Q96HS1 Q96HS1 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 469.896 3 467.224874 1398.65279 90142.98 0.89016 0.00041591 -0.29387 -0.0001373 0.5963 0.00027861 467.224608119641 469.896139803095 102.39 1.0547 102.39 101.9 102.95 0 201 80 5 0 0 0 0.0013329 2 59280 70.089 52.878 1 1.8156 2.2048 0 17826000 7910800 9915100 2621 1178 1350 1497 4237;4238 4238 HSVDSVLTALQDSSK 15 1 0 Phospho (STY) _HSVDSVLTALQDS(ph)SK_ HSVDSVLTALQDS(0.835)S(0.165)K HS(-204.09)VDS(-152.03)VLT(-94.19)ALQDS(7.03)S(-7.03)K 0 0 1 0 Q5T5X7 Q5T5X7 Q5T5X7 BEND3 BEN domain-containing protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 833.8892 2 833.887824 1665.7611 68740.54 0.79395 0.00066206 -0.012491 -1.0416E-05 0.78146 0.00065165 833.888005309043 837.894648225845 110.36 1.0864 110.36 109.93 111.01 -7.6294E-06 239 93 5 0 0 0 2.1856E-160 1 65365 227 213.59 5 0.50826 0.61918 0 18423000 11520000 6903600 2622 1104 1351 1498 4239 4239 2092 HTGPNSPDTANDGFVR 16 0 1 Phospho (STY) _HTGPNS(ph)PDTANDGFVR_ HT(0.058)GPNS(0.94)PDT(0.002)ANDGFVR HT(-12.06)GPNS(12.06)PDT(-27.76)ANDGFVR 0 0 1 0 G8JLB6;P31943;E9PCY7;D6RIU0;D6RBM0;P55795;E5RGH4;E7EQJ0;D6RAM1;E5RGV0;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;H0YAQ2 G8JLB6 G8JLB6 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 588.9161 3 588.91609 1763.72644 77993.03 0.58891 0.00034682 0.033896 1.9962E-05 0.62281 0.00036678 588.916036389755 592.252270843924 64.881 0.4884 64.881 64.563 65.052 0 201 35 8 0 0 0 1.2521E-07 2 30944 81.316 70.891 3 1.6814 2.1234 0 109800000 42942000 66858000 2623 844 1352 1499 4240;4241 4241 1449 HTGPNSPDTANDGFVR 16 0 1 Phospho (STY) _HTGPNS(ph)PDTANDGFVR_ HT(0.009)GPNS(0.984)PDT(0.007)ANDGFVR HT(-20.35)GPNS(20.35)PDT(-21.3)ANDGFVR 0 0 1 0 G8JLB6;P31943;E9PCY7;D6RIU0;D6RBM0;P55795;E5RGH4;E7EQJ0;D6RAM1;E5RGV0;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;H0YAQ2 G8JLB6 G8JLB6 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 882.8709 2 882.870497 1763.72644 64477.64 0.67486 0.00059582 0.090236 7.9667E-05 0.7651 0.00067549 882.870347130375 887.874698700944 64.88 0.48907 64.88 64.536 65.025 0 187 35 8 0 0 0 0.00034328 1 30911 46.319 34.453 3 1.5772 1.9918 0 112100000 41583000 70519000 2624 844 1352 1499 4242 4242 1449 HTGPNSPDTANDGFVR 16 0 1 Phospho (STY) _HTGPNS(ph)PDTANDGFVR_ HTGPNS(1)PDTANDGFVR HT(-84.5)GPNS(47.65)PDT(-47.65)ANDGFVR 0 0 1 0 G8JLB6;P31943;E9PCY7;D6RIU0;D6RBM0;P55795;E5RGH4;E7EQJ0;D6RAM1;E5RGV0;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;H0YAQ2 G8JLB6 G8JLB6 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 882.8719 2 882.870497 1763.72644 63868.23 0.62926 0.00055555 -0.22825 -0.00020152 0.401 0.00035403 882.870541163925 887.874617732591 67.227 1.4167 67.227 66.442 67.859 0 841 113 10 0 0 0 5.2985E-51 4 32611 149.73 103.42 3 1.3676 1.7334 0 840710000 355440000 485280000 2625 844 1352 1499 4243;4244;4245;4246 4244 1449 HTGPNSPDTANDGFVR 16 0 1 Phospho (STY) _HTGPNS(ph)PDTANDGFVR_ HT(0.032)GPNS(0.968)PDTANDGFVR HT(-14.75)GPNS(14.75)PDT(-42.14)ANDGFVR 0 0 1 0 G8JLB6;P31943;E9PCY7;D6RIU0;D6RBM0;P55795;E5RGH4;E7EQJ0;D6RAM1;E5RGV0;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;H0YAQ2 G8JLB6 G8JLB6 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 592.2522 3 588.91609 1763.72644 79254.57 0.55128 0.00032466 -0.13149 -7.7437E-05 0.41979 0.00024722 588.91606584575 592.252149007182 67.301 1.0722 67.301 66.657 67.73 0 651 88 10 0 0 0 1.8707E-12 3 33032 98.175 87.184 3 1.3845 1.7527 0 424610000 169890000 254720000 2626 844 1352 1499 4247;4248;4249 4248 1449 HTGPNSPDTANDGFVR 16 0 1 Phospho (STY) _HTGPNS(ph)PDTANDGFVR_ HT(0.212)GPNS(0.752)PDT(0.035)ANDGFVR HT(-5.49)GPNS(5.49)PDT(-13.29)ANDGFVR 0 0 1 0 G8JLB6;P31943;E9PCY7;D6RIU0;D6RBM0;P55795;E5RGH4;E7EQJ0;D6RAM1;E5RGV0;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;H0YAQ2 G8JLB6 G8JLB6 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 588.9165 3 588.91609 1763.72644 78622.05 0.86546 0.00050968 0.059987 3.5327E-05 0.92545 0.00054501 588.91612275315 592.252235066435 38.562 1.6991 38.562 38.057 39.756 0 759 149 8 0 0 0 0.00012064 1 22024 48.968 35.868 3 1.188 0.87394 0 23995000 11062000 12932000 2627 844 1352 1499 4250 4250 1449 HTGPNSPDTANDGFVR 16 0 1 Phospho (STY) _HTGPNS(ph)PDTANDGFVR_ HT(0.004)GPNS(0.983)PDT(0.013)ANDGFVR HT(-23.78)GPNS(18.84)PDT(-18.84)ANDGFVR 0 0 1 0 G8JLB6;P31943;E9PCY7;D6RIU0;D6RBM0;P55795;E5RGH4;E7EQJ0;D6RAM1;E5RGV0;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;H0YAQ2 G8JLB6 G8JLB6 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 887.8754 2 882.870497 1763.72644 65686.02 0.95745 0.0008453 0.20136 0.00017777 1.1588 0.0010231 882.870501976189 887.874914122351 38.521 1.9474 38.521 38.107 40.055 0 817 172 7 0 0 0 0.00019367 1 22430 51.76 39.546 3 1.2039 0.84198 0 35924000 16713000 19212000 2628 844 1352 1499 4251 4251 1449 HTGPNSPDTANDGFVR 16 0 1 Phospho (STY) _HTGPNS(ph)PDTANDGFVR_ HTGPNS(0.999)PDT(0.001)ANDGFVR HT(-77.8)GPNS(31.09)PDT(-31.09)ANDGFVR 0 0 1 0 G8JLB6;P31943;E9PCY7;D6RIU0;D6RBM0;P55795;E5RGH4;E7EQJ0;D6RAM1;E5RGV0;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;H0YAQ2 G8JLB6 G8JLB6 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 887.8756 2 882.870497 1763.72644 64494.59 1.0069 0.00088893 -0.050663 -4.4729E-05 0.9562 0.0008442 882.87060573667 887.874707193536 42.457 3.9447 42.457 41.481 45.426 0 2568 353 11 0 0 0 5.2487E-86 6 25415 176.82 126.83 3 1.0886 0.7064 0 576990000 279900000 297100000 2629 844 1352 1499 4252;4253;4254;4255;4256;4257 4254 1449 HTGPNSPDTANDGFVR 16 0 1 Phospho (STY) _HTGPNS(ph)PDTANDGFVR_ HT(0.015)GPNS(0.984)PDT(0.001)ANDGFVR HT(-18.03)GPNS(18.03)PDT(-31.84)ANDGFVR 0 0 1 0 G8JLB6;P31943;E9PCY7;D6RIU0;D6RBM0;P55795;E5RGH4;E7EQJ0;D6RAM1;E5RGV0;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;H0YAQ2 G8JLB6 G8JLB6 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 592.2526 3 588.91609 1763.72644 78564.34 0.9225 0.00054328 0.20056 0.00011812 1.1231 0.00066139 588.916255125278 592.252250829825 42.44 3.4991 42.44 41.578 45.077 0 1757 315 10 0 0 0 1.6221E-09 4 25491 85.61 77.83 3 1.1079 0.73812 0 155760000 71673000 84083000 2630 844 1352 1499 4258;4259;4260;4261 4259 1449 HTGPNSPDTANDGFVR 16 0 1 Unmodified _HTGPNSPDTANDGFVR_ 0 0 0 0 G8JLB6;P31943;E9PCY7;D6RIU0;D6RBM0;P55795;E5RGH4;E7EQJ0;D6RAM1;E5RGV0;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;H0YAQ2 G8JLB6 G8JLB6 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 562.5956 3 562.260647 1683.76011 81423.77 0.7315 0.0004113 -0.18155 -0.00010208 0.54996 0.00030922 562.260282506534 565.596799989231 79.433 0.82856 79.433 79.074 79.903 0 321 75 7 0 0 0 2.2757E-05 2 41719 67.685 67.685 1 1.5688 1.9756 0 52809000 17845000 34965000 2631 844 1352 1500 4262;4263 4263 HTGPNSPDTANDGFVR 16 0 1 Unmodified _HTGPNSPDTANDGFVR_ 0 0 0 0 G8JLB6;P31943;E9PCY7;D6RIU0;D6RBM0;P55795;E5RGH4;E7EQJ0;D6RAM1;E5RGV0;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;H0YAQ2 G8JLB6 G8JLB6 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 848.3934 2 842.887332 1683.76011 NaN NaN NaN -0.20651 -0.00017406 NaN NaN NaN NaN 79.387 0.41407 79.387 79.19 79.604 0 0 0 0 0.017131 1 41776 36.847 20.957 1 NaN NaN 0 6321400 0 6321400 2632 844 1352 1500 4264 4264 HVDYVADQIVTK 12 1 0 Unmodified _HVDYVADQIVTK_ 0 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 698.3722 2 694.364441 1386.71433 72721.72 1.4636 0.0010163 0.16082 0.00011167 1.6244 0.0011279 694.364531402991 698.371512595303 101.99 2.3373 101.99 101.4 103.74 0 1005 180 8 0 0 0 1.1276E-148 6 58932 230.41 200.92 1 0.75601 0.93553 0 240840000 135290000 105550000 2633 962 1353 1501 4265;4266;4267;4268;4269;4270 4268 HVDYVVDQVVGK 12 1 0 Unmodified _HVDYVVDQVVGK_ 0 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 679.361 2 679.359159 1356.70376 NaN NaN NaN 0.43906 0.00029828 NaN NaN NaN NaN 111.2 0.42743 111.2 110.97 111.4 0 0 0 0 1.4244E-88 1 65776 164.65 131.27 1 NaN NaN 0 12094000 12094000 0 2634 1032 1354 1502 4271 4271 HVDYVVDQVVGK 12 1 0 Unmodified _HVDYVVDQVVGK_ 0 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 679.3596 2 679.359159 1356.70376 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.42 1 110.42 109.92 110.92 -7.6294E-06 0 0 0 3.7024E-20 1 65170 141.88 106.37 1 2635 1032 1354 1502 4272 4272 HVDYVVDQVVGK 12 1 0 Unmodified _HVDYVVDQVVGK_ 0 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 679.3596 2 679.359159 1356.70376 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.52 1 110.52 110.02 111.02 0 0 0 0 5.4567E-13 1 65240 129.89 99.319 1 2636 1032 1354 1502 4273 4273 HVFFFDTK 8 1 0 Unmodified _HVFFFDTK_ 0 0 0 0 Q9Y3A2 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 524.7706 2 520.763635 1039.51272 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.68 1 131.68 131.18 132.18 0 0 0 0 0.02967 1 80106 44.447 6.209 1 2637 1249 1355 1503 4274 4274 HVFHPK 6 1 0 Unmodified _HVFHPK_ 0 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 382.7132 2 382.713748 763.412943 NaN NaN NaN -0.0048354 -1.8506E-06 NaN NaN NaN NaN 98.504 1.3965 98.504 97.596 98.993 0 0 0 0 0.00024024 2 55966 76.553 18.297 1 NaN NaN 0 14609000 14609000 0 2638 1027 1356 1504 4275;4276 4276 HVFHPK 6 1 0 Unmodified _HVFHPK_ 0 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 382.7141 2 382.713748 763.412943 NaN NaN NaN 0.10299 3.9417E-05 NaN NaN NaN NaN 99.835 0.49217 99.835 99.693 100.19 0 0 0 0 0.0004514 1 57174 74.849 22.259 1 NaN NaN 0 8028500 8028500 0 2639 1027 1356 1504 4277 4277 HVLEGHDR 8 0 1 Unmodified _HVLEGHDR_ 0 0 0 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 324.8343 3 321.498269 961.472977 105222.3 -0.50804 -0.00016334 0.64559 0.00020756 0.13755 4.4221E-05 321.498408647052 324.834485915728 83.134 0.88137 83.134 82.51 83.392 7.6294E-06 326 78 6 0 0 0 0.0031055 2 44272 69.423 59.009 1 1.385 1.7499 0 142990000 53879000 89107000 2640 1006 1357 1505 4278;4279 4278 HVTLPSSPR 9 0 1 Phospho (STY) _HVTLPS(ph)SPR_ HVT(0.063)LPS(0.469)S(0.469)PR HVT(-8.72)LPS(0)S(0)PR 0 0 1 0 X6RE05;A0A0A0MSW0;A0A024RAC9;Q5T4S7 X6RE05 X6RE05 UBR4;ZUBR1 E3 ubiquitin-protein ligase UBR4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 542.2658 2 537.260606 1072.50666 82779.59 0.88208 0.00047391 -0.19297 -0.00010368 0.68911 0.00037023 537.260411129851 542.264666804794 34.919 1.1803 34.919 34.461 35.641 0 330 91 5 0 0 0 0.0077247 1 19228 61.213 52.988 3 0.94288 0.75049 0 11699000 6113200 5586200 2641 181 1358 1506 4280 4280 289;290 HVTNPAFTK 9 1 0 Unmodified _HVTNPAFTK_ 0 0 0 0 Q58EY4;Q92922;Q05BW5;Q05CR1;F8WE13 Q58EY4 Q58EY4 SMARCC1 SWI/SNF complex subunit SMARCC1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 511.7791 2 507.771991 1013.52943 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.154 1 79.154 78.654 79.654 0 0 0 0 0.0038443 1 41658 71.349 42.2 1 2642 1092 1359 1507 4281 4281 HVVFIAQR 8 0 1 Unmodified _HVVFIAQR_ 0 0 0 0 B5MCP9;P62081 B5MCP9 B5MCP9 RPS7 40S ribosomal protein S7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 490.2892 2 485.285069 968.555585 87699.88 0.98894 0.00047992 0.19916 9.6649E-05 1.1881 0.00057657 485.284922959525 490.289457645601 101.67 1.0567 101.67 101.11 102.16 7.6294E-06 304 89 4 0 0 0 0.0207 2 58453 83.801 73.387 1 0.92877 1.1475 0 33307000 17020000 16288000 2643 693 1360 1508 4282;4283 4282 HVVSPEQIATSDK 13 1 0 Phospho (STY) _HVVS(ph)PEQIATSDK_ HVVS(1)PEQIATSDK HVVS(51.03)PEQIAT(-51.03)S(-56.4)DK 0 0 1 0 A7E234;Q9H582;Q9NVH8;Q9NZF0;A0A087WZL9 A7E234 A7E234 ZNF644 Zinc finger protein 644 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 749.8556 2 745.847971 1489.68139 71330.69 0.89552 0.00066792 0.23024 0.00017172 1.1258 0.00083965 745.847883116028 749.855116042226 75.881 1.1797 75.881 75.397 76.577 0 505 102 7 0 0 0 6.4122E-05 3 39080 88.282 66.05 3 0.53067 0.65966 0 88412000 55755000 32658000 2644 432 1361 1509 4284;4285;4286 4285 750 HVVSPEQIATSDK 13 1 0 Phospho (STY) _HVVS(ph)PEQIATSDK_ HVVS(1)PEQIATSDK HVVS(52.98)PEQIAT(-52.98)S(-53.21)DK 0 0 1 0 A7E234;Q9H582;Q9NVH8;Q9NZF0;A0A087WZL9 A7E234 A7E234 ZNF644 Zinc finger protein 644 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 749.8548 2 745.847971 1489.68139 NaN NaN NaN -0.47737 -0.00035605 NaN NaN NaN NaN 61.675 2.6599 61.675 60.828 63.488 0 0 0 0 0.00042283 2 38341 79.337 55.961 3 NaN NaN 0 50084000 0 50084000 2645 432 1361 1509 4287;4288 4287 750 HWGGNVLGPK 10 1 0 Unmodified _HWGGNVLGPK_ 0 0 0 0 P62424;Q9BY74;Q5T8U2 P62424 P62424 RPL7A;RP-L7a 60S ribosomal protein L7a MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 532.786 2 532.785433 1063.55631 83169.51 0.74689 0.00039793 -0.019469 -1.0373E-05 0.72742 0.00038756 532.785313502291 536.792387211666 105.89 1.6069 105.89 105.05 106.65 0 434 108 5 0 0 0 1.3041E-09 2 61409 129.47 100.95 1 0.71507 0.90633 0 33796000 17720000 16076000 2646 1019 1362 1510 4289;4290 4289 HYVYGPLPQSFDK 13 1 0 Unmodified _HYVYGPLPQSFDK_ 0 0 0 0 H3BPG0;P13073 H3BPG0 H3BPG0 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 775.8878 2 775.885541 1549.75653 NaN NaN NaN NaN NaN NaN NaN NaN NaN 120.91 1 120.91 120.41 121.41 0 0 0 0 2.8684E-05 1 72897 77.677 52.292 1 2647 868 1363 1511 4291 4291 IACEEEFSDSEEEGEGGR 18 0 1 Phospho (STY) _IACEEEFS(ph)DSEEEGEGGR_ IACEEEFS(0.964)DS(0.036)EEEGEGGR IACEEEFS(14.34)DS(-14.34)EEEGEGGR 0 0 1 0 Q6IT96;B5BU61;Q13547;B4DRG0;Q5HYD4 Q6IT96 Q6IT96 HDAC1;DKFZp686H12203 Histone deacetylase;Histone deacetylase 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1060.3895 2 1055.38317 2108.75179 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.549 1 59.549 59.049 60.049 -3.8147E-06 0 0 0 1.5576E-06 1 26757 95.767 78.881 2 2648 690 1364 1512 4292 4292 1136 IACKSPPPESMDTPTSTR 18 1 1 Oxidation (M),Phospho (STY) _IACKS(ph)PPPESM(ox)DTPTSTR_ IACKSPPPESM(1)DTPTSTR IACKS(0.998)PPPES(0.002)MDTPTSTR IACKSPPPESM(59.81)DTPTSTR IACKS(28.01)PPPES(-28.01)MDT(-43.87)PT(-50.72)S(-50.72)T(-50.72)R 0 1 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 690.9677 3 690.967245 2069.87991 72678 0.89936 0.00062143 -0.020441 -1.4124E-05 0.87892 0.0006073 691.301710338249 696.974561717432 47.449 0.92577 47.449 46.965 47.89 0 414 63 8 0 0 0 2.2911E-06 1 18197 59.814 50.399 6 1.9702 2.3253 0 45508000 14580000 30928000 2649 994 1365 1513 4293 4293 281 1777;2892 IACKSPPPESMDTPTSTR 18 1 1 Oxidation (M),Phospho (STY) _IACKSPPPESM(ox)DTPT(ph)STR_ IACKSPPPESM(1)DTPTSTR IACKS(0.012)PPPES(0.063)MDT(0.306)PT(0.443)S(0.088)T(0.088)R IACKSPPPESM(47.39)DTPTSTR IACKS(-15.63)PPPES(-8.46)MDT(-1.61)PT(1.61)S(-7.01)T(-7.01)R 0 1 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 690.9676 3 690.967245 2069.87991 72354.73 0.87091 0.00060177 -0.37345 -0.00025804 0.49747 0.00034373 690.967433411364 696.974759369782 17.978 0.8957 17.978 17.531 18.427 0 226 38 11 0 0 0 0.00010708 1 5089 47.392 41.732 6 2.9368 2.2657 0 70666000 14158000 56508000 2650 994 1365 1513 4294 4294 281 1777;2892 IACKSPPPESMDTPTSTR 18 1 1 Oxidation (M),Phospho (STY) _IACKS(ph)PPPESM(ox)DTPTSTR_ IACKSPPPESM(1)DTPTSTR IACKS(1)PPPESMDTPTSTR IACKSPPPESM(107.21)DTPTSTR IACKS(63.37)PPPES(-63.37)MDT(-78.15)PT(-87.52)S(-87.52)T(-83.34)R 0 1 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 696.9749 3 690.967245 2069.87991 71145.63 0.71581 0.0004946 0.1635 0.00011298 0.87932 0.00060758 690.967457267681 696.974833729705 19.757 1.0929 19.757 19.207 20.3 0 207 52 6 0 0 0 4.9635E-18 2 6663 107.21 91.328 6 3.0366 2.3249 0 24593000 5929700 18664000 2651 994 1365 1513 4295;4296 4295 281 1777;2892 IACKSPPPESMDTPTSTR 18 1 1 Oxidation (M),Phospho (STY) _IACKS(ph)PPPESM(ox)DTPTSTR_ IACKSPPPESM(1)DTPTSTR IACKS(0.995)PPPES(0.002)MDT(0.001)PT(0.001)S(0.001)T(0.001)R IACKSPPPESM(41.32)DTPTSTR IACKS(26.38)PPPES(-26.38)MDT(-31.76)PT(-31.91)S(-31.57)T(-31.57)R 0 1 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1045.4603 2 1035.94723 2069.87991 59216.78 0.43469 0.00045032 -0.20609 -0.0002135 0.2286 0.00023682 1036.44914341996 1044.95865548664 27.338 1.4088 27.338 26.77 28.179 0 748 92 15 0 0 0 0.00074947 1 13034 41.323 35.663 6 2.9794 2.307 0 604490000 151150000 453340000 2652 994 1365 1513 4297 4297 281 1777;2892 IACKSPPPESMDTPTSTR 18 1 1 Oxidation (M),Phospho (STY) _IACKS(ph)PPPESM(ox)DTPTSTR_ IACKSPPPESM(1)DTPTSTR IACKS(0.999)PPPES(0.001)MDTPTSTR IACKSPPPESM(56.48)DTPTSTR IACKS(30.07)PPPES(-30.07)MDT(-42.85)PT(-50.21)S(-49.88)T(-49.88)R 0 1 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 696.975 3 690.967245 2069.87991 71041.46 0.86284 0.00059619 -0.56728 -0.00039197 0.29556 0.00020422 690.967762241914 696.974902008607 27.438 1.6986 27.438 26.578 28.277 0 975 108 15 0 0 0 2.7822E-06 1 13939 56.48 46.558 6 2.994 2.3206 0 1055900000 281700000 774170000 2653 994 1365 1513 4298 4298 281 1777;2892 IACKSPPPESMDTPTSTR 18 1 1 Oxidation (M),Phospho (STY) _IACKS(ph)PPPESM(ox)DTPTSTR_ IACKSPPPESM(1)DTPTSTR IACKS(0.998)PPPES(0.001)MDTPTSTR IACKSPPPESM(44.58)DTPTSTR IACKS(28.57)PPPES(-28.57)MDT(-35.07)PT(-37.54)S(-37.14)T(-37.14)R 0 1 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 696.9755 3 690.967245 2069.87991 NaN NaN NaN 0.073817 5.1005E-05 NaN NaN NaN NaN 45.25 1.4842 45.25 44.458 45.942 -3.8147E-06 0 0 0 0.0021517 1 26694 44.582 34.795 6 NaN NaN 0 13190000 0 13190000 2654 994 1365 1513 4299 4299 281 1777;2892 IACKSPPPESMDTPTSTR 18 1 1 Phospho (STY) _IACKS(ph)PPPESMDTPTSTR_ IACKS(1)PPPESMDTPTSTR IACKS(58.35)PPPES(-58.35)MDT(-107.9)PT(-118.53)S(-118.53)T(-118.53)R 0 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 691.9784 3 685.635607 2053.88499 73076.13 0.88409 0.00060617 -0.19067 -0.00013073 0.69342 0.00047543 685.635655101789 691.643163571039 45.324 2.0043 45.324 44.211 46.216 0 955 185 9 0 0 0 9.1213E-63 1 26862 159.2 159.2 6 4.3375 3.3445 0 51149000 7673200 43475000 2655 994 1365 1514 4300 4300 1777;2892 IACKSPPPESMDTPTSTR 18 1 1 Phospho (STY) _IACKS(ph)PPPESMDTPTSTR_ IACKS(1)PPPESMDTPTSTR IACKS(40.12)PPPES(-40.12)MDT(-44.88)PT(-52.79)S(-52.06)T(-52.06)R 0 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1037.4645 2 1027.94977 2053.88499 60279.03 0.41401 0.00042558 0.60548 0.0006224 1.0195 0.001048 1028.4518515918 1036.96176769496 45.322 1.607 45.322 44.407 46.014 -3.8147E-06 609 148 7 0 0 0 1.8372E-08 1 26982 80.638 63.56 6 5.1073 3.9225 0 29094000 5900900 23194000 2656 994 1365 1514 4301 4301 1777;2892 IACKSPPPESVDTPTSTK 18 2 0 Phospho (STY) _IACKS(ph)PPPESVDTPTSTK_ IACKS(0.999)PPPESVDTPTSTK IACKS(33.16)PPPES(-33.16)VDT(-45.82)PT(-51.52)S(-56.21)T(-56.21)K 0 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 670.9861 3 665.642868 1993.90677 74666.18 0.91346 0.00060804 -0.058361 -3.8848E-05 0.8551 0.00056919 665.642728775174 670.985679451695 56.549 1.2277 56.549 56.121 57.349 -3.8147E-06 356 103 6 0 0 0 1.1349E-06 2 24354 66.467 60.051 6 1.6516 2.0632 0 41362000 18240000 23122000 2657 994 1366 1515 4302;4303 4302 1778 IACKSPPPESVDTPTSTK 18 2 0 Phospho (STY) _IACKS(ph)PPPESVDTPTSTK_ IACKS(0.998)PPPES(0.002)VDTPTSTK IACKS(28.22)PPPES(-28.22)VDT(-37.2)PT(-38)S(-38)T(-38)K 0 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 997.9615 2 997.960663 1993.90677 62328.36 0.56762 0.00056646 -0.28227 -0.00028169 0.28535 0.00028477 998.461401411683 1006.47611604206 56.482 1.0717 56.482 56.133 57.204 0 163 90 4 0 0 0 0.00014465 2 24417 44.567 39.025 6 1.3218 1.5796 0 26971000 12515000 14456000 2658 994 1366 1515 4304;4305 4304 1778 IACKSPPPESVDTPTSTK 18 2 0 Phospho (STY) _IACKS(ph)PPPESVDTPTSTK_ IACKS(0.998)PPPES(0.001)VDTPTSTK IACKS(28.32)PPPES(-28.32)VDT(-39.36)PT(-44.12)S(-44.12)T(-44.12)K 0 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1005.9753 2 997.960663 1993.90677 NaN NaN NaN 0.022573 2.2527E-05 NaN NaN NaN NaN 56.617 1.0717 56.617 56.148 57.219 0 0 0 0 7.0866E-05 2 24430 54.281 36.58 6 NaN NaN 0 17498000 0 17498000 2659 994 1366 1515 4306;4307 4306 1778 IACKSPPPESVDTPTSTK 18 2 0 Phospho (STY) _IACKS(ph)PPPESVDTPTSTK_ IACKS(1)PPPESVDTPTSTK IACKS(46.56)PPPES(-46.56)VDT(-52.14)PT(-57.44)S(-57.44)T(-57.44)K 0 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 670.9871 3 665.642868 1993.90677 72884.73 0.39968 0.00026605 0.65587 0.00043657 1.0555 0.00070262 665.643223582738 670.986262880275 23.752 0.77544 23.752 23.362 24.137 0 229 45 7 0 0 0 7.4244E-08 1 10061 72.568 72.568 6 3.8184 3.0869 0 26273000 6675600 19597000 2660 994 1366 1515 4308 4308 1778 IACKSPPPESVDTPTSTK 18 2 0 Phospho (STY) _IACKS(ph)PPPESVDTPTSTK_ IACKS(0.841)PPPES(0.008)VDT(0.013)PT(0.05)S(0.05)T(0.038)K IACKS(12.24)PPPES(-20.43)VDT(-18.15)PT(-12.24)S(-12.24)T(-13.41)K 0 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 670.986 3 665.642868 1993.90677 74673.02 0.88786 0.000591 0.15918 0.00010596 1.047 0.00069696 665.643265958315 670.985849906912 27.91 1.3671 27.91 27.43 28.797 0 297 92 6 0 0 0 2.5839E-06 1 13684 56.882 56.882 6 3.9857 3.173 0 30691000 7800300 22891000 2661 994 1366 1515 4309 4309 1778 IACKSPPPESVDTPTSTK 18 2 0 Phospho (STY) _IACKS(ph)PPPESVDTPTSTK_ IACKS(1)PPPESVDTPTSTK IACKS(78.99)PPPES(-78.99)VDT(-115.28)PT(-122.25)S(-127.82)T(-126.67)K 0 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 670.9865 3 665.642868 1993.90677 72519.59 1.0699 0.00071219 0.069629 4.6348E-05 1.1396 0.00075854 665.977455829405 670.985950998656 40.033 3.5976 40.033 39.086 42.683 0 2426 320 11 0 0 0 1.1389E-101 4 23961 185.62 185.62 6 3.9211 2.8594 0 671690000 134570000 537120000 2662 994 1366 1515 4310;4311;4312;4313 4313 1778 IACKSPPPESVDTPTSTK 18 2 0 Phospho (STY) _IACKS(ph)PPPESVDTPTSTK_ IACKS(1)PPPESVDTPTSTK IACKS(47.83)PPPES(-47.83)VDT(-62.87)PT(-68.26)S(-67.23)T(-66.16)K 0 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 998.4635 2 997.960663 1993.90677 59736.58 0.38755 0.00038676 0.2137 0.00021326 0.60125 0.00060002 998.462602839355 1005.97534492291 39.952 3.7155 39.952 39.099 42.814 -3.8147E-06 2420 330 12 0 0 0 1.8569E-17 4 23737 104.38 97.013 6 3.9452 2.8718 0 769610000 160490000 609120000 2663 994 1366 1515 4314;4315;4316;4317 4315 1778 IACKSPPPESVDTPTSTK 18 2 0 Phospho (STY) _IACKS(ph)PPPESVDTPTSTK_ IACKS(1)PPPESVDTPTSTK IACKS(57.83)PPPES(-57.83)VDT(-76.13)PT(-76.55)S(-74.09)T(-74.09)K 0 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 671.3204 3 665.642868 1993.90677 NaN NaN NaN 0.29933 0.00019924 NaN NaN NaN NaN 26.391 0.74965 26.391 26.02 26.77 -1.9073E-06 0 0 0 5.0329E-12 1 12505 93.006 78.236 6 NaN NaN 0 11928000 0 11928000 2664 994 1366 1515 4318 4318 1778 IACKSPQPDPVDTPASTK 18 2 0 Phospho (STY) _IACKS(ph)PQPDPVDTPASTK_ IACKS(0.999)PQPDPVDTPASTK IACKS(34.01)PQPDPVDT(-34.01)PAS(-34.15)T(-34.15)K 0 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 669.9865 3 664.642979 1990.90711 72361.85 1.0019 0.00066588 -0.18367 -0.00012208 0.81819 0.00054381 664.976959515146 669.986011191557 43.761 2.8335 43.761 42.336 45.169 0 1220 257 7 0 0 0 0.00012516 1 25727 43.198 43.198 4 2.1607 1.6263 0 63141000 20363000 42778000 2665 994 1367 1516 4319 4319 1779 IACKSPQPDPVDTPASTK 18 2 0 Phospho (STY) _IACKS(ph)PQPDPVDTPASTK_ IACKS(1)PQPDPVDTPASTK IACKS(88.74)PQPDPVDT(-88.74)PAS(-103.78)T(-103.78)K 0 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1004.977 2 996.46083 1990.90711 60812.62 0.33134 0.00033017 0.20177 0.00020106 0.53311 0.00053123 996.962820761459 1004.47586042574 43.79 2.3533 43.79 42.578 44.931 0 1104 215 9 0 0 0 1.8963E-52 3 25754 149.36 149.36 4 2.3841 1.7991 0 55161000 17415000 37746000 2666 994 1367 1516 4320;4321;4322 4320 1779 IACRSPQPDPVGTPTIFK 18 1 1 Phospho (STY) _IACRS(ph)PQPDPVGTPTIFK_ IACRS(1)PQPDPVGTPTIFK IACRS(47.36)PQPDPVGT(-47.36)PT(-50.24)IFK 0 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 688.6712 3 688.67098 2062.99111 72841.48 0.84588 0.00058253 -1.2758 -0.00087859 -0.42989 -0.00029605 689.004660072704 694.678083248772 104.48 0.9475 104.48 103.97 104.91 0 418 67 8 0 0 0 1.9603E-06 2 60245 61.345 52.905 3 1.46 1.729 0 52684000 21773000 30910000 2667 994 1368 1517 4323;4324 4324 1780 IACRSPQPDPVGTPTIFK 18 1 1 Phospho (STY) _IACRS(ph)PQPDPVGTPTIFK_ IACRS(0.999)PQPDPVGT(0.001)PTIFK IACRS(31.53)PQPDPVGT(-31.53)PT(-34.93)IFK 0 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1032.5046 2 1032.50283 2062.99111 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.29 1 104.29 103.79 104.79 0 0 0 0 0.0030528 1 60358 42.382 27.227 3 2668 994 1368 1517 4325 4325 1780 IACRSPQPDPVGTPTIFK 18 1 1 Phospho (STY) _IACRS(ph)PQPDPVGTPTIFK_ IACRS(1)PQPDPVGTPTIFK IACRS(44)PQPDPVGT(-44)PT(-47.15)IFK 0 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 695.014 3 688.67098 2062.99111 72419.38 1.0519 0.0007244 -0.058594 -4.0352E-05 0.99329 0.00068405 689.005152629025 694.678541014772 101.61 1.2414 101.61 101.1 102.34 0 726 115 9 0 0 0 7.3195E-06 1 65603 53.266 43.982 3 3.2218 2.485 0 60494000 13536000 46958000 2669 994 1368 1517 4326 4326 1780 IACRSPQPDPVGTPTIFKPQSK 22 2 1 Phospho (STY) _IACRS(ph)PQPDPVGTPTIFKPQSK_ IACRS(0.999)PQPDPVGTPTIFKPQSK IACRS(34.02)PQPDPVGT(-34.02)PT(-39.92)IFKPQS(-40.81)K 0 0 1 2 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 844.0973 3 835.417091 2503.22944 NaN NaN NaN NaN NaN NaN NaN NaN NaN 102.87 1 102.87 102.37 103.37 -7.6294E-06 0 0 0 0.0042689 1 59341 40.819 32.632 4 2670 994 1369 1518 4327 4327 1780 IACRSPQPDPVGTPTIFKPQSK 22 2 1 Phospho (STY) _IACRS(ph)PQPDPVGTPTIFKPQSK_ IACRS(1)PQPDPVGTPTIFKPQSK IACRS(47.68)PQPDPVGT(-47.68)PT(-56.88)IFKPQS(-70.63)K 0 0 1 2 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 627.0663 4 626.814638 2503.22944 74802.6 1.1915 0.00074687 -0.30961 -0.00019407 0.88192 0.0005528 627.065339081382 633.574372343066 88.317 1.8143 88.317 87.747 89.561 0 1271 177 10 0 0 0 4.8667E-19 3 57108 82.089 82.089 4 3.2644 2.6467 0 148710000 36771000 111940000 2671 994 1369 1518 4328;4329;4330 4329 1780 IACRSPQPDPVGTPTIFKPQSK 22 2 1 Phospho (STY) _IACRS(ph)PQPDPVGTPTIFKPQSK_ IACRS(1)PQPDPVGTPTIFKPQSK IACRS(60.37)PQPDPVGT(-60.37)PT(-65.77)IFKPQS(-71.42)K 0 0 1 2 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 835.7528 3 835.417091 2503.22944 65866.84 1.1422 0.00095419 -0.28289 -0.00023633 0.85928 0.00071786 835.751498318822 844.095936339362 88.302 2.0221 88.302 87.672 89.694 0 1469 196 11 0 0 0 1.2975E-14 1 57093 72.564 65.118 4 3.1871 2.5752 0 185330000 42785000 142550000 2672 994 1369 1518 4331 4331 1780 IAISPLKSPNK 11 2 0 2 Phospho (STY) _IAIS(ph)PLKS(ph)PNK_ IAIS(1)PLKS(1)PNK IAIS(59.29)PLKS(59.29)PNK 0 0 2 1 Q7Z3G2;B4DFU0;A0A024RDD8;Q6MZP7 Q7Z3G2 Q7Z3G2 DKFZp686L18142;DKFZp686L1814;LIN54 Protein lin-54 homolog MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 672.3395 2 664.324761 1326.63497 75315.12 1.1532 0.00076612 0.74196 0.0004929 1.8952 0.001259 664.325531059082 672.338923157121 80.254 0.76834 80.254 79.897 80.665 0 266 73 5 0 0 0 0.0045749 1 51361 59.294 59.294 1 0.83312 0.68639 0 21374000 10438000 10935000 2673 226 1370 1519 4332 4332 354;355 IALTDNALIAR 11 0 1 Unmodified _IALTDNALIAR_ 0 0 0 0 A8MUD9;O95036;A0A024R814;P18124 A8MUD9 A8MUD9 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 585.8466 2 585.845687 1169.67682 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.01 1 104.01 103.51 104.51 0 0 0 0 0.006107 1 60156 53.327 28.404 1 2674 145 1371 1520 4333 4333 IANPVEGSTDR 11 0 1 Unmodified _IANPVEGSTDR_ 0 0 0 0 H3BSS4;Q15366;B4DRD7;H3BRU6;F8VRH0;F8VZX2 H3BSS4 H3BSS4 PCBP2 Poly(rC)-binding protein 2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 584.7951 2 579.791109 1157.56767 NaN NaN NaN -0.14416 -8.358E-05 NaN NaN NaN NaN 58.595 0.62991 58.595 58.266 58.895 3.8147E-06 0 0 0 0.018574 1 25939 50.292 10.291 1 NaN NaN 0 4041200 0 4041200 2675 872 1372 1521 4334 4334 IAQLSESPVILTPNAK 16 1 0 Phospho (STY) _IAQLSES(ph)PVILTPNAK_ IAQLS(0.007)ES(0.993)PVILTPNAK IAQLS(-21.6)ES(21.6)PVILT(-45.7)PNAK 0 0 1 0 Q6P4F7;H3BQ41;H3BR51 Q6P4F7 Q6P4F7 ARHGAP11A Rho GTPase-activating protein 11A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 884.9714 2 880.963335 1759.91212 66358.01 0.84482 0.00074425 -0.2155 -0.00018985 0.62931 0.0005544 881.464268658303 884.970386921287 107.78 0.52997 107.78 107.5 108.03 0 137 38 5 0 0 0 2.7028E-16 3 62820 107.34 90.27 3 1.6165 1.9495 0 16605000 6947100 9658000 2676 1122 1373 1522 4335;4336;4337 4335 2135;2136;2956 IAQLSESPVILTPNAK 16 1 0 Phospho (STY) _IAQLSES(ph)PVILTPNAK_ IAQLS(0.048)ES(0.912)PVILT(0.04)PNAK IAQLS(-12.79)ES(12.79)PVILT(-13.61)PNAK 0 0 1 0 Q6P4F7;H3BQ41;H3BR51 Q6P4F7 Q6P4F7 ARHGAP11A Rho GTPase-activating protein 11A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 884.9713 2 880.963335 1759.91212 65549.87 1.1391 0.0010035 -1.133 -0.00099814 0.006049 5.3289E-06 880.960142870783 884.968846188811 114.13 1.4443 114.13 113.44 114.88 -7.6294E-06 417 136 6 0 0 0 0.0010824 1 73459 41.695 35.397 3 1.2127 0.81112 0 27700000 11398000 16302000 2677 1122 1373 1522 4338 4338 2135;2136;2956 IAQLSESPVILTPNAK 16 1 0 2 Phospho (STY) _IAQLSES(ph)PVILT(ph)PNAK_ IAQLS(0.078)ES(0.922)PVILT(1)PNAK IAQLS(-10.7)ES(10.7)PVILT(73.91)PNAK 0 0 2 0 Q6P4F7;H3BQ41;H3BR51 Q6P4F7 Q6P4F7 ARHGAP11A Rho GTPase-activating protein 11A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 920.9487 2 920.9465 1839.87845 65462.88 0.6658 0.00061316 0.50729 0.00046719 1.1731 0.0010804 921.447823942963 924.954384111071 108.1 0.69627 108.1 107.82 108.52 7.6294E-06 195 52 6 0 0 0 4.1471E-16 3 63470 104.45 104.45 3 1.7526 2.1913 0 26514000 9718500 16796000 2678 1122 1373 1523 4339;4340;4341 4340 2135;2136;2956 IAQLSESPVILTPNAK 16 1 0 2 Phospho (STY) _IAQLS(ph)ES(ph)PVILTPNAK_ IAQLS(1)ES(1)PVILTPNAK IAQLS(43.59)ES(36.15)PVILT(-36.15)PNAK 0 0 2 0 Q6P4F7;H3BQ41;H3BR51 Q6P4F7 Q6P4F7 ARHGAP11A Rho GTPase-activating protein 11A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 924.9536 2 920.9465 1839.87845 67462.56 0.39627 0.00036494 0.57943 0.00053362 0.9757 0.00089856 920.947084833426 924.954023953705 114.3 0.53735 114.3 114.03 114.56 7.6294E-06 145 47 4 0 0 0 8.7017E-05 1 68073 58.98 51.37 3 1.5282 1.873 0 20681000 9262600 11418000 2679 1122 1373 1523 4342 4342 2135;2136;2956 IAQLSESPVILTPNAK 16 1 0 2 Phospho (STY) _IAQLSES(ph)PVILT(ph)PNAK_ IAQLS(0.211)ES(0.789)PVILT(1)PNAK IAQLS(-5.72)ES(5.72)PVILT(58.08)PNAK 0 0 2 0 Q6P4F7;H3BQ41;H3BR51 Q6P4F7 Q6P4F7 ARHGAP11A Rho GTPase-activating protein 11A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 924.9549 2 920.9465 1839.87845 64022.42 1.0898 0.0010037 0.32672 0.00030089 1.4165 0.0013046 920.947263571683 924.954573319895 117.68 0.68075 117.68 117.44 118.13 -7.6294E-06 233 62 6 0 0 0 5.2617E-07 1 75834 80.238 80.238 3 6.1755 4.41 0 21432000 3290200 18142000 2680 1122 1373 1523 4343 4343 2135;2136;2956 IAQLSESPVILTPNAK 16 1 0 2 Phospho (STY) _IAQLS(ph)ES(ph)PVILTPNAK_ IAQLS(1)ES(1)PVILTPNAK IAQLS(44.24)ES(38.09)PVILT(-38.09)PNAK 0 0 2 0 Q6P4F7;H3BQ41;H3BR51 Q6P4F7 Q6P4F7 ARHGAP11A Rho GTPase-activating protein 11A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 925.4547 2 920.9465 1839.87845 63188.89 1.0049 0.00092547 0.32928 0.00030325 1.3342 0.0012287 920.947104141633 924.953880763691 123.82 0.8758 123.82 123.48 124.36 0 382 83 7 0 0 0 0.00013344 1 79955 52.344 52.344 3 4.0221 2.7195 0 26028000 4800000 21228000 2681 1122 1373 1523 4344 4344 2135;2136;2956 IAQVSPGPR 9 0 1 Phospho (STY) _IAQVS(ph)PGPR_ IAQVS(1)PGPR IAQVS(89.8)PGPR 0 0 1 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 507.7539 2 502.749874 1003.4852 85409.29 0.47511 0.00023886 -0.11119 -5.5898E-05 0.36393 0.00018296 502.749724491671 507.753864175908 44.438 0.96496 44.438 43.95 44.915 0 326 70 6 0 0 0 0.00012941 2 16391 89.805 38.61 1 0.88648 0.99429 0 10117000 5144400 4972900 2682 1212 1374 1524 4345;4346 4345 2426 IAQVSPGPR 9 0 1 Phospho (STY) _IAQVS(ph)PGPR_ IAQVS(1)PGPR IAQVS(99.22)PGPR 0 0 1 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 507.7544 2 502.749874 1003.4852 85360.95 0.58323 0.00029322 0.35946 0.00018072 0.9427 0.00047394 502.750050079858 507.754115649718 32.157 0.4833 32.157 31.925 32.409 0 172 38 6 0 0 0 4.146E-05 2 17313 104.79 57.608 1 1.3859 1.0073 0 26023000 10088000 15935000 2683 1212 1374 1524 4347;4348 4347 2426 IAQVSPGPRDSPAFPDSPWR 20 0 2 2 Phospho (STY) _IAQVSPGPRDS(ph)PAFPDS(ph)PWR_ IAQVS(0.157)PGPRDS(0.845)PAFPDS(0.999)PWR IAQVS(-7.35)PGPRDS(7.35)PAFPDS(27.74)PWR 0 0 2 1 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 780.6784 3 780.678514 2339.01371 68868.8 0.77963 0.00060864 -0.057559 -4.4935E-05 0.72207 0.0005637 781.01272554255 787.684885088788 106.77 0.80502 106.77 106.36 107.16 -7.6294E-06 333 64 7 0 0 0 1.0606E-05 1 62077 50.055 41.665 3 0.61486 0.76241 0 38992000 20754000 18238000 2684 1212 1375 1525 4349 4349 2420;2421;2426 IAQVSPGPRDSPAFPDSPWR 20 0 2 2 Phospho (STY) _IAQVS(ph)PGPRDS(ph)PAFPDSPWR_ IAQVS(1)PGPRDS(0.999)PAFPDS(0.001)PWR IAQVS(55.39)PGPRDS(30.05)PAFPDS(-30.05)PWR 0 0 2 1 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 787.6866 3 780.678514 2339.01371 67191.34 0.75537 0.0005897 0.049536 3.8672E-05 0.80491 0.00062837 781.012911909701 787.684880838723 109.96 2.2605 109.96 109.24 111.5 -7.6294E-06 941 187 11 0 0 0 4.7488E-09 4 64554 69.845 61.656 3 0.74396 0.93381 0 734680000 404120000 330560000 2685 1212 1375 1525 4350;4351;4352;4353 4350 2420;2421;2426 IAQVSPGPRDSPAFPDSPWR 20 0 2 2 Phospho (STY) _IAQVS(ph)PGPRDS(ph)PAFPDSPWR_ IAQVS(1)PGPRDS(1)PAFPDSPWR IAQVS(56.54)PGPRDS(39)PAFPDS(-39)PWR 0 0 2 1 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1171.0168 2 1170.51413 2339.01371 56060.27 0.19128 0.0002239 0.25345 0.00029666 0.44473 0.00052056 1171.01566359681 1180.52269861235 109.99 0.8766 109.99 109.61 110.49 0 493 71 9 0 0 0 1.2862E-10 1 64665 78.088 65.728 3 0.81337 1.0164 0 250630000 127200000 123430000 2686 1212 1375 1525 4354 4354 2420;2421;2426 IAQVSPGPRDSPAFPDSPWR 20 0 2 3 Phospho (STY) _IAQVS(ph)PGPRDS(ph)PAFPDS(ph)PWR_ IAQVS(1)PGPRDS(1)PAFPDS(1)PWR IAQVS(43.96)PGPRDS(43.96)PAFPDS(43.96)PWR 0 0 3 1 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 807.3341 3 807.333957 2418.98004 67051.42 0.85575 0.00069088 0.00028584 2.3077E-07 0.85604 0.00069111 807.668296151266 814.340644894373 112.09 0.89827 112.09 111.66 112.56 0 602 79 10 0 0 0 1.8591E-05 1 66218 43.955 39.517 1 0.52665 0.65698 0 166560000 108580000 57972000 2687 1212 1375 1526 4355 4355 2420;2421;2426 IAQVSPGPRDSPAFPDSPWRER 22 0 3 3 Phospho (STY) _IAQVS(ph)PGPRDS(ph)PAFPDS(ph)PWRER_ IAQVS(1)PGPRDS(1)PAFPDS(1)PWRER IAQVS(49.97)PGPRDS(49.97)PAFPDS(49.97)PWRER 0 0 3 2 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 902.7177 3 902.381859 2704.12375 62712.48 1.4825 0.0013378 0.87651 0.00079095 2.359 0.0021287 902.716910905014 912.725495931326 101.95 0.91336 101.95 101.53 102.44 0 496 75 9 0 0 0 2.8114E-07 1 58540 49.968 49.968 1 0.50424 0.58526 0 60107000 37847000 22260000 2688 1212 1376 1527 4356 4356 2420;2421;2426 ICNEILTSPCSPEIR 15 0 1 Phospho (STY) _ICNEILTS(ph)PCSPEIR_ ICNEILT(0.394)S(0.516)PCS(0.091)PEIR ICNEILT(-1.17)S(1.17)PCS(-7.56)PEIR 0 0 1 0 Q6NUR1;Q9BPX3 Q6NUR1 Q6NUR1 NCAPG Condensin complex subunit 3 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 935.4185 2 934.917744 1867.82094 NaN NaN NaN 0.22747 0.00021266 NaN NaN NaN NaN 104.6 0.5696 104.6 104.38 104.95 0 0 0 0 0.0054648 1 67310 40.857 27.656 3 NaN NaN 0 4391500 4391500 0 2689 1119 1377 1528 4357 4357 2124 IDEAESLNDEELEEK 15 1 0 Unmodified _IDEAESLNDEELEEK_ 0 0 0 0 B7ZAX9;B4DZC0;O60264 B7ZAX9 B7ZAX9 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 886.4058 2 881.896893 1761.77923 66632.04 0.97888 0.00086327 0.42858 0.00037796 1.4075 0.0012412 882.39980696513 885.904435024119 72.633 0.55842 72.633 72.352 72.91 0 153 53 6 0 0 0 0.0013972 1 45969 69.229 60.716 1 3.4896 2.6324 0 10371000 2166000 8204500 2690 672 1378 1529 4358 4358 IDISPSTFR 9 0 1 Phospho (STY) _IDIS(ph)PSTFR_ IDIS(1)PSTFR IDIS(39.07)PS(-39.07)T(-45.46)FR 0 0 1 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 563.2649 2 558.260272 1114.50599 80470.41 1.4028 0.00078313 -0.38851 -0.00021689 1.0143 0.00056624 558.260136857098 563.264084907806 101.63 2.3217 101.63 100.85 103.17 7.6294E-06 1019 181 8 0 0 0 4.9092E-14 6 58591 143.5 90.923 3 1.1014 1.396 0 857570000 402840000 454740000 2691 1248 1379 1530 4359;4360;4361;4362;4363;4364 4361 2568 IDISPSTFR 9 0 1 Phospho (STY) _IDIS(ph)PSTFR_ IDIS(0.98)PS(0.009)T(0.011)FR IDIS(19.41)PS(-20.43)T(-19.41)FR 0 0 1 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 563.2648 2 558.260272 1114.50599 80024.12 0.88829 0.0004959 -0.20552 -0.00011473 0.68278 0.00038117 558.260176489222 563.264176264718 106.76 2.1048 106.76 106.06 108.16 0 1110 200 8 0 0 0 0.0042886 5 68792 67.385 38.236 3 1.352 0.89161 0 258350000 111990000 146360000 2692 1248 1379 1530 4365;4366;4367;4368;4369 4367 2568 IDISPSTFR 9 0 1 Phospho (STY) _IDIS(ph)PSTFR_ IDIS(0.916)PS(0.042)T(0.042)FR IDIS(13.41)PS(-13.41)T(-13.41)FR 0 0 1 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 563.2653 2 558.260272 1114.50599 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.47 1 108.47 107.97 108.97 7.6294E-06 0 0 0 0.0055897 1 69792 53.567 32.039 3 2693 1248 1379 1530 4370 4370 2568 IDISPSTLR 9 0 1 Phospho (STY) _IDIS(ph)PSTLR_ IDIS(0.998)PS(0.001)TLR IDIS(28.51)PS(-28.51)T(-36.2)LR 0 0 1 0 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 546.2722 2 541.268097 1080.52164 81119.77 0.71905 0.0003892 -0.21761 -0.00011778 0.50144 0.00027142 541.268039686803 546.272088858313 95.124 2.0146 95.124 94.095 96.11 0 973 170 8 0 0 0 5.3112E-06 3 53453 120.06 82.506 3 0.91517 1.1601 0 948190000 481500000 466700000 2694 809 1380 1531 4371;4372;4373 4372 1396 IDISPSTLR 9 0 1 Phospho (STY) _IDIS(ph)PSTLR_ IDIS(0.939)PS(0.031)T(0.031)LR IDIS(14.85)PS(-14.85)T(-14.85)LR 0 0 1 0 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 546.2726 2 541.268097 1080.52164 81726.9 0.97042 0.00052526 -0.4364 -0.00023621 0.53402 0.00028905 541.26788868624 546.271865939962 99.247 1.8496 99.247 98.54 100.39 7.6294E-06 952 175 8 0 0 0 0.0070802 3 63937 62.408 40.658 3 1.0523 0.70187 0 146670000 71149000 75520000 2695 809 1380 1531 4374;4375;4376 4375 1396 IDISPSTLR 9 0 1 Phospho (STY) _IDIS(ph)PSTLR_ IDIS(0.658)PS(0.171)T(0.171)LR IDIS(5.84)PS(-5.84)T(-5.84)LR 0 0 1 0 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 541.2689 2 541.268097 1080.52164 NaN NaN NaN NaN NaN NaN NaN NaN NaN 101.09 1 101.09 100.59 101.59 0 0 0 0 0.022333 1 65011 40.616 8.2012 3 2696 809 1380 1531 4377 4377 1396 IDISPSTLRK 10 1 1 Phospho (STY) _IDIS(ph)PSTLRK_ IDIS(0.964)PS(0.018)T(0.018)LRK IDIS(17.23)PS(-17.23)T(-17.23)LRK 0 0 1 1 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 614.2789 2 605.315578 1208.6166 82163.54 0.30331 0.0001836 0.46686 0.0002826 0.77017 0.00046619 605.315663739601 614.327249842784 83.358 0.35935 83.358 83.226 83.586 0 70 31 4 0 0 0 0.010076 1 44733 51.727 28.501 3 1.0731 1.1934 0 15263000 6286100 8976700 2697 809 1381 1532 4378 4378 1396 IDISPSTLRK 10 1 1 Phospho (STY) _IDIS(ph)PSTLRK_ IDIS(0.993)PS(0.003)T(0.003)LRK IDIS(24.56)PS(-24.56)T(-24.56)LRK 0 0 1 1 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 614.3277 2 605.315578 1208.6166 77272.16 0.99742 0.00060376 -0.23147 -0.00014011 0.76595 0.00046364 605.315494574211 614.326737106835 75.705 1.1657 75.705 75.291 76.457 0 612 101 9 0 0 0 0.003394 2 48069 59.57 36.344 3 1.1611 0.89567 0 65993000 30223000 35770000 2698 809 1381 1532 4379;4380 4380 1396 IDLPEVQIEHDPELEKESPGLK 22 2 0 Phospho (STY) _IDLPEVQIEHDPELEKES(ph)PGLK_ IDLPEVQIEHDPELEKES(1)PGLK IDLPEVQIEHDPELEKES(58.88)PGLK 0 0 1 1 Q14966;D6W5H1;A8K583;B4E187 Q14966 Q14966 ZNF638 Zinc finger protein 638 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 866.0933 3 865.757836 2594.25168 66469.59 1.1456 0.00099179 0.08358 7.236E-05 1.2292 0.0010642 865.757872367732 871.100942315368 112.95 0.42963 112.95 112.73 113.16 0 253 38 10 0 0 0 2.3638E-09 1 72663 58.877 58.877 1 0.77976 0.5995 0 44933000 25190000 19744000 2699 1066 1382 1533 4381 4381 2006 IDRTDAISEEK 11 1 1 Phospho (STY) _IDRT(ph)DAISEEK_ IDRT(0.999)DAIS(0.001)EEK IDRT(29.57)DAIS(-29.57)EEK 0 0 1 1 H0Y5E8;Q8NG23;Q5SQT9;Q9NR31;Q6FID4 H0Y5E8 H0Y5E8 SAR1A;SARA1 GTP-binding protein SAR1a ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 458.8803 3 452.87294 1355.59699 NaN NaN NaN 0.34023 0.00015408 NaN NaN NaN NaN 51.867 0.71497 51.867 51.612 52.327 0 0 0 0 0.018329 1 21228 40.941 22.926 2 NaN NaN 0 4235500 0 4235500 2700 851 1383 1534 4382 4382 2835 IDTHPSPSHSSTVK 14 1 0 Phospho (STY) _IDTHPS(ph)PSHSSTVK_ IDT(0.006)HPS(0.85)PS(0.027)HS(0.039)S(0.039)T(0.039)VK IDT(-21.27)HPS(13.39)PS(-14.91)HS(-13.39)S(-13.39)T(-13.39)VK 0 0 1 0 H7C477;B7ZBA0;H0Y594;H0Y7U4;A0A0C4DG98;Q8NI27 H7C477 H7C477 THOC2 THO complex subunit 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 524.9069 3 524.906643 1571.6981 82374.67 0.69176 0.00036311 0.078864 4.1396E-05 0.77063 0.00040451 524.906495378113 527.578098639565 18.012 0.2091 18.012 17.897 18.106 0 50 8 8 0 0 0 0.0013376 1 5162 47.09 30.425 6 1.3756 0.95823 0 23410000 9537400 13873000 2701 319 1384 1535 4383 4383 502 IDTIEIITDR 10 0 1 Unmodified _IDTIEIITDR_ 0 0 0 0 I6L957;A0A087WUI2;A0A024RA28;P22626 I6L957 I6L957 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 599.8306 2 594.82716 1187.63977 NaN NaN NaN -0.31464 -0.00018716 NaN NaN NaN NaN 107.38 0.59024 107.38 107.17 107.76 0 0 0 0 1.7331E-22 2 62917 120.12 78.01 1 NaN NaN 0 8076700 0 8076700 2702 177 1385 1536 4384;4385 4385 IDTIEIITDR 10 0 1 Unmodified _IDTIEIITDR_ 0 0 0 0 I6L957;A0A087WUI2;A0A024RA28;P22626 I6L957 I6L957 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 594.8275 2 594.82716 1187.63977 NaN NaN NaN NaN NaN NaN NaN NaN NaN 107.52 1 107.52 107.02 108.02 0 0 0 0 0.0011701 1 62788 96.331 70.594 1 2703 177 1385 1536 4386 4386 IDYQGRPSGGFVISGVLSPDTISSK 25 1 1 2 Phospho (STY) _IDYQGRPS(ph)GGFVISGVLS(ph)PDTISSK_ IDY(0.013)QGRPS(0.987)GGFVISGVLS(0.928)PDT(0.064)IS(0.006)S(0.002)K IDY(-18.91)QGRPS(18.91)GGFVIS(-41.85)GVLS(11.64)PDT(-11.64)IS(-21.95)S(-26.69)K 0 0 2 1 Q03188;H0Y8J2;H0Y9W1 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 920.435 3 914.092541 2739.25579 63220.26 0.75534 0.00069045 0.10663 9.747E-05 0.86197 0.00078792 914.426861277292 920.434689943168 126.2 1.1672 126.2 125.7 126.87 0 661 102 11 0 0 0 9.9879E-32 1 76436 91.594 81.443 21 0.56495 0.67608 0 118170000 76214000 41958000 2704 1035 1386 1537 4387 4387 1912;1913 IEALQNHENESVYK 14 1 0 Unmodified _IEALQNHENESVYK_ 0 0 0 0 Q7Z726;A8K7D9;P52292 Q7Z726 Q7Z726 KPNA2 Importin subunit alpha;Importin subunit alpha-1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 558.6099 3 558.609164 1672.80566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.694 1 75.694 75.194 76.194 0 0 0 0 3.8285E-06 1 39034 66.285 21.669 1 2705 488 1387 1538 4388 4388 IEDNNTLVFIVDVK 14 1 0 Unmodified _IEDNNTLVFIVDVK_ 0 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 813.9463 2 809.93797 1617.86139 71654.99 0.88849 0.00071963 0.059904 4.8518E-05 0.9484 0.00076814 810.439406496209 814.446413745874 133.36 0.26648 133.36 133.14 133.41 0 58 18 7 0 0 0 1.2223E-32 1 81169 138.75 138.75 1 0.67816 0.81266 0 14374000 7738000 6636200 2706 511 1388 1539 4389 4389 IEDNNTLVFIVDVK 14 1 0 Unmodified _IEDNNTLVFIVDVK_ 0 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 809.9386 2 809.93797 1617.86139 NaN NaN NaN 0.17594 0.0001425 NaN NaN NaN NaN 131.48 0.14633 131.48 131.41 131.55 0 0 0 0 0.00026957 1 79986 57.836 40.4 1 NaN NaN 0 1089100 1089100 0 2707 511 1388 1539 4390 4390 IEDNNTLVFIVDVK 14 1 0 Unmodified _IEDNNTLVFIVDVK_ 0 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 809.938 2 809.93797 1617.86139 NaN NaN NaN -0.20315 -0.00016454 NaN NaN NaN NaN 132.7 0.46126 132.7 132.41 132.87 0 0 0 0 0.0041438 1 80595 48.004 32.414 1 NaN NaN 0 2248900 2248900 0 2708 511 1388 1539 4391 4391 IEDVTPIPSDSTR 13 0 1 Phospho (STY) _IEDVTPIPS(ph)DSTR_ IEDVTPIPS(0.858)DS(0.071)T(0.071)R IEDVT(-38.6)PIPS(10.84)DS(-10.84)T(-10.84)R 0 0 1 0 P62263 P62263 P62263 RPS14 40S ribosomal protein S14 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 760.3501 2 755.345261 1508.67597 69592.13 0.92103 0.00069569 -0.17167 -0.00012967 0.74936 0.00056602 755.345630352037 760.348726669493 82.368 1.0206 82.368 81.925 82.946 0 401 92 6 0 0 0 0.0041718 1 52933 63.727 56.448 4 1.8054 1.2684 0 33610000 14108000 19502000 2709 1017 1389 1540 4392 4392 1849;1850;2903 IEDVTPIPSDSTR 13 0 1 Phospho (STY) _IEDVTPIPS(ph)DSTR_ IEDVTPIPS(0.333)DS(0.333)T(0.333)R IEDVT(-33.29)PIPS(0)DS(0)T(0)R 0 0 1 0 P62263 P62263 P62263 RPS14 40S ribosomal protein S14 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 755.3465 2 755.345261 1508.67597 69564.42 0.87443 0.0006605 -0.72143 -0.00054493 0.153 0.00011557 755.345567942962 760.349247672376 83.239 0.9306 83.239 82.816 83.747 7.6294E-06 295 86 5 0 0 0 0.0058611 1 53336 48.229 41.846 4 1.5399 1.0907 0 30922000 11613000 19308000 2710 1017 1389 1540 4393 4393 1849;1850;2903 IEENSLKEEESIEGEK 16 2 0 2 Phospho (STY) _IEENS(ph)LKEEES(ph)IEGEK_ IEENS(1)LKEEES(1)IEGEK IEENS(109.72)LKEEES(109.72)IEGEK 0 0 2 1 B3KY63;F5GWX5;A0A0C4DGG9;Q14839 B3KY63 B3KY63 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1011.9147 2 1011.91325 2021.81194 60289.51 0.25282 0.00025583 -0.037775 -3.8225E-05 0.21504 0.00021761 1012.41504024329 1019.92672717562 63.516 1.5722 63.516 62.95 64.523 0 569 122 9 0 0 0 2.7833E-17 1 30261 109.72 99.062 1 0.37158 0.48184 0 155890000 117330000 38566000 2711 324 1390 1541 4394 4394 509;510 IEENSLKEEESIEGEK 16 2 0 Phospho (STY) _IEENS(ph)LKEEESIEGEK_ IEENS(1)LKEEESIEGEK IEENS(42.41)LKEEES(-42.41)IEGEK 0 0 1 1 B3KY63;F5GWX5;A0A0C4DGG9;Q14839 B3KY63 B3KY63 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 653.6323 3 648.289147 1941.84561 75439.12 0.80884 0.00052436 0.15023 9.7391E-05 0.95907 0.00062175 648.623588949805 653.631973948377 67.657 1.5071 67.657 66.964 68.471 0 600 129 6 0 0 0 3.331E-38 2 33617 138.07 98.415 2 0.44987 0.57236 0 79203000 53039000 26164000 2712 324 1390 1542 4395;4396 4396 509;510 IEENSLKEEESIEGEK 16 2 0 Phospho (STY) _IEENSLKEEES(ph)IEGEK_ IEENSLKEEES(1)IEGEK IEENS(-67.88)LKEEES(67.88)IEGEK 0 0 1 1 B3KY63;F5GWX5;A0A0C4DGG9;Q14839 B3KY63 B3KY63 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 971.9302 2 971.930083 1941.84561 62373.13 0.32858 0.00031936 0.14339 0.00013937 0.47197 0.00045873 972.431707211017 979.944362040153 68.525 2.2324 68.525 66.991 69.223 0 692 201 7 0 0 0 3.8133E-152 2 33990 220.82 191.1 2 0.48522 0.61568 0 72054000 48437000 23616000 2713 324 1390 1542 4397;4398 4397 509;510 IEENSLKEEESIEGEK 16 2 0 Phospho (STY) _IEENS(ph)LKEEESIEGEK_ IEENS(0.644)LKEEES(0.356)IEGEK IEENS(2.57)LKEEES(-2.57)IEGEK 0 0 1 1 B3KY63;F5GWX5;A0A0C4DGG9;Q14839 B3KY63 B3KY63 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 648.2894 3 648.289147 1941.84561 75439.15 0.52377 0.00033956 0.61522 0.00039884 1.139 0.0007384 648.289023465015 653.631797506818 68.557 0.37976 68.557 68.462 68.842 0 108 37 6 0 0 0 4.2442E-05 1 34070 60.062 34.864 2 0.47033 0.57535 0 32691000 24171000 8519600 2714 324 1390 1542 4399 4399 509;510 IEENSLKEEESIEGEK 16 2 0 Phospho (STY) _IEENSLKEEES(ph)IEGEK_ IEENSLKEEES(1)IEGEK IEENS(-44.78)LKEEES(44.78)IEGEK 0 0 1 1 B3KY63;F5GWX5;A0A0C4DGG9;Q14839 B3KY63 B3KY63 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 653.6328 3 648.289147 1941.84561 76104.7 1.2722 0.00082477 -0.20866 -0.00013527 1.0636 0.0006895 648.623606956083 653.631593854138 56.387 1.1147 56.387 55.766 56.88 3.8147E-06 589 94 9 0 0 0 1.262E-32 1 34477 129.02 88.18 2 1.7321 1.3383 0 42547000 15680000 26867000 2715 324 1390 1542 4400 4400 509;510 IEENSLKEEESIEGEK 16 2 0 Phospho (STY) _IEENS(ph)LKEEESIEGEK_ IEENS(1)LKEEESIEGEK IEENS(35.22)LKEEES(-35.22)IEGEK 0 0 1 1 B3KY63;F5GWX5;A0A0C4DGG9;Q14839 B3KY63 B3KY63 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 972.4309 2 971.930083 1941.84561 60639.94 0.81359 0.00079075 -0.30955 -0.00030086 0.50404 0.00048989 971.929983895347 979.944085604672 57.567 1.3916 57.567 56.925 58.316 3.8147E-06 647 124 8 0 0 0 6.6558E-05 4 35572 64.565 50.886 2 1.0984 0.823 0 88458000 42958000 45500000 2716 324 1390 1542 4401;4402;4403;4404 4403 509;510 IEENSLKEEESIEGEK 16 2 0 Phospho (STY) _IEENS(ph)LKEEESIEGEK_ IEENS(0.779)LKEEES(0.221)IEGEK IEENS(5.47)LKEEES(-5.47)IEGEK 0 0 1 1 B3KY63;F5GWX5;A0A0C4DGG9;Q14839 B3KY63 B3KY63 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 648.6241 3 648.289147 1941.84561 74967.88 1.32 0.00085575 -0.59961 -0.00038872 0.7204 0.00046703 648.288825805551 653.631208039773 57.616 1.8495 57.616 56.936 58.785 0 739 166 6 0 0 0 0.00031551 1 35842 42.711 10.893 2 0.92924 0.70901 0 48862000 19561000 29301000 2717 324 1390 1542 4405 4405 509;510 IEEVPELPLVVEDK 14 1 0 Unmodified _IEEVPELPLVVEDK_ 0 0 0 0 H3BM89;Q59GY2;P36578;B4DMJ2;Q53G74;B4DFI6 H3BM89 H3BM89 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 804.9412 2 804.940179 1607.8658 69369.7 0.84933 0.00068366 0.019136 1.5403E-05 0.86847 0.00069906 804.940144800875 808.947238506871 123.33 0.78868 123.33 122.85 123.64 7.6294E-06 355 71 6 0 0 0 0.00020455 1 74482 79.693 66.03 1 0.94103 1.1585 0 22706000 10821000 11885000 2718 866 1391 1543 4406 4406 IEIHEQEAILHNFSSTNPTQVNGSVIDEPVR 31 0 1 Unmodified _IEIHEQEAILHNFSSTNPTQVNGSVIDEPVR_ 0 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 872.1891 4 869.187845 3472.72228 63328.09 0.66211 0.0005755 -3.1769 -0.0027613 -2.5148 -0.0021858 869.686044929357 872.188522382528 145.49 0.26479 145.49 145.31 145.57 -1.5259E-05 65 6 16 0 0 0 0.0049839 1 83897 19.144 19.144 1 1.7257 2.142 0 35637000 13237000 22400000 2719 994 1392 1544 4407 4407 IEISELNR 8 0 1 Unmodified _IEISELNR_ 0 0 0 0 H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRG2;CON__P35908;P35908 H6VRG3;H6VRG2;CON__P35908 H6VRG2 KRT1;KRT2 Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 487.2692 2 487.269281 972.52401 NaN NaN NaN -0.015661 -7.6309E-06 NaN NaN NaN NaN 79.564 1.0325 79.564 79.041 80.073 0 0 0 0 0.0067269 1 41668 73.26 6.228 1 NaN NaN 0 16614000 16614000 0 + 2720 876;877;758 1393 1545 4408 4408 IEISELNR 8 0 1 Unmodified _IEISELNR_ 0 0 0 0 H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRG2;CON__P35908;P35908 H6VRG3;H6VRG2;CON__P35908 H6VRG2 KRT1;KRT2 Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 487.2697 2 487.269281 972.52401 NaN NaN NaN -0.2694 -0.00013127 NaN NaN NaN NaN 66.283 0.64384 66.283 65.839 66.483 -7.6294E-06 0 0 0 0.019442 1 41161 58.917 7.13 1 NaN NaN 0 6749500 6749500 0 + 2721 876;877;758 1393 1545 4409 4409 IEISELNR 8 0 1 Unmodified _IEISELNR_ 0 0 0 0 H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRG2;CON__P35908;P35908 H6VRG3;H6VRG2;CON__P35908 H6VRG2 KRT1;KRT2 Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 2 epidermal MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 487.2689 2 487.269281 972.52401 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.691 1 66.691 66.191 67.191 0 0 0 0 0.01813 1 41710 54.157 6.3086 1 + 2722 876;877;758 1393 1545 4410 4410 IEISELNR 8 0 1 Unmodified _IEISELNR_ 0 0 0 0 H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRG2;CON__P35908;P35908 H6VRG3;H6VRG2;CON__P35908 H6VRG2 KRT1;KRT2 Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 2 epidermal MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 487.2701 2 487.269281 972.52401 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.748 1 67.748 67.248 68.248 7.6294E-06 0 0 0 0.022637 1 42455 50.127 4.4086 1 + 2723 876;877;758 1393 1545 4411 4411 IELRATLFMKNK 12 2 1 Oxidation (M),Phospho (STY) _IELRAT(ph)LFM(ox)KNK_ IELRATLFM(1)KNK IELRAT(1)LFMKNK IELRATLFM(43.9)KNK IELRAT(43.9)LFMKNK 0 1 1 2 REV__E5RJN9 REV__E5RJN9 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 520.9401 3 520.60536 1558.79425 84914.13 0.2321 0.00012083 0.50059 0.00026061 0.73269 0.00038144 520.605794606521 529.284293718048 73.216 0.67978 73.216 72.896 73.576 0 127 59 4 0 0 0 0.034885 1 37300 43.897 24.255 1 1.1885 1.3924 0 35334000 14162000 21172000 + 2724 1260 1394 1546 4412 4412 365 3010 IELSPPIEVVQK 12 1 0 Phospho (STY) _IELS(ph)PPIEVVQK_ IELS(1)PPIEVVQK IELS(66.5)PPIEVVQK 0 0 1 0 Q13127 Q13127 Q13127 REST RE1-silencing transcription factor MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 716.3785 2 716.378375 1430.7422 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.88 1 115.88 115.38 116.38 -7.6294E-06 0 0 0 0.00015011 1 69187 66.498 44.266 1 2725 1047 1395 1547 4413 4413 1955 IEQVDKEDEITEK 13 2 0 Unmodified _IEQVDKEDEITEK_ 0 0 0 1 B3KN82;Q9Y2X3 B3KN82 B3KN82 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 525.9294 3 525.929792 1574.76755 83703.42 0.4693 0.00024682 -0.084988 -4.4698E-05 0.38431 0.00020212 525.929636417261 531.272385610801 67.432 1.0065 67.432 67.158 68.164 0 386 86 7 0 0 0 0.00021647 2 33094 86.467 52.685 1 0.83181 1.0641 0 96129000 49419000 46710000 2726 578 1396 1548 4414;4415 4415 IEQVDKEDEITEK 13 2 0 Unmodified _IEQVDKEDEITEK_ 0 0 0 1 B3KN82;Q9Y2X3 B3KN82 B3KN82 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 788.3912 2 788.39105 1574.76755 70443.17 0.87786 0.00069209 -0.10271 -8.0972E-05 0.77515 0.00061112 788.390945566938 796.404927960094 67.466 0.61062 67.466 67.286 67.897 0 145 53 5 0 0 0 7.4424E-06 2 33104 93.959 57.642 1 0.7795 0.91787 0 23872000 11572000 12300000 2727 578 1396 1548 4416;4417 4416 IERPGEGSPMVDNPMR 16 0 2 2 Oxidation (M),Phospho (STY) _IERPGEGS(ph)PM(ox)VDNPM(ox)R_ IERPGEGSPM(1)VDNPM(1)R IERPGEGS(1)PMVDNPMR IERPGEGSPM(88.87)VDNPM(88.87)R IERPGEGS(88.87)PMVDNPMR 0 2 1 1 A0A087WVR3;A0A087WTW0;Q96T88 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 632.9377 3 632.937509 1895.7907 75753.98 0.67848 0.00042943 -0.61044 -0.00038637 0.068041 4.3066E-05 632.937252226799 639.609693789462 55.356 1.3892 55.356 54.649 56.038 -3.8147E-06 802 110 13 0 0 0 4.6419E-10 3 23619 88.872 76.956 1 0.84098 1.051 0 257030000 134560000 122470000 2728 246 1397 1549 4418;4419;4420 4419 59;60 388 IESDEEEDFENVGK 14 1 0 Phospho (STY) _IES(ph)DEEEDFENVGK_ IES(1)DEEEDFENVGK IES(278.73)DEEEDFENVGK 0 0 1 0 Q96T23 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 860.8375 2 860.335287 1718.65602 66198.66 0.71992 0.00061938 1.2337E-05 1.0614E-08 0.71994 0.00061939 860.335355255137 864.342375206903 78.408 1.5546 78.408 77.647 79.202 0 946 137 9 0 0 0 1.1243E-290 4 41378 278.73 245.12 1 0.46365 0.57321 0 372820000 259980000 112850000 2729 1188 1398 1550 4421;4422;4423;4424 4423 2343 IESDEEEDFENVGK 14 1 0 Phospho (STY) _IES(ph)DEEEDFENVGK_ IES(1)DEEEDFENVGK IES(90.71)DEEEDFENVGK 0 0 1 0 Q96T23 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 864.8451 2 860.335287 1718.65602 66332.39 0.99687 0.00085764 -0.060887 -5.2383E-05 0.93599 0.00080526 860.335241586175 864.342323801426 82.351 1.0844 82.351 81.915 83 0 704 98 10 0 0 0 8.6564E-07 4 53051 90.707 77.294 1 1.0145 0.67719 0 372040000 186680000 185360000 2730 1188 1398 1550 4425;4426;4427;4428 4427 2343 IESPKLER 8 1 1 Phospho (STY) _IES(ph)PKLER_ IES(1)PKLER IES(50.29)PKLER 0 0 1 1 Q5TBM3;B4DY72;B4DF68;A0A0A0MSM0;A0A024RDQ0;A0A024RDS1;Q92598 Q5TBM3 Q5TBM3 HSPH1 Heat shock protein 105 kDa MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 535.275 2 526.262814 1050.51108 84948.27 0.42109 0.0002216 -0.069632 -3.6645E-05 0.35146 0.00018496 526.262077435391 535.274090681013 58.828 0.73212 58.828 58.282 59.014 0 177 59 4 0 0 0 0.016508 1 26259 50.292 6.0892 1 2.0937 2.3393 0 16921000 5380700 11541000 2731 230 1399 1551 4429 4429 359 IETDEEESCDNAHGDANQPAR 21 0 1 Phospho (STY) _IET(ph)DEEESCDNAHGDANQPAR_ IET(0.999)DEEES(0.001)CDNAHGDANQPAR IET(29.25)DEEES(-29.25)CDNAHGDANQPAR 0 0 1 0 Q96T23 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 813.6465 3 813.311456 2436.91254 67041.93 0.8643 0.00070295 -0.22264 -0.00018108 0.64166 0.00052187 813.645858721276 816.981513952082 40.05 0.97404 40.05 39.518 40.492 0 649 87 11 0 0 0 2.5252E-19 1 13880 88.168 79.729 2 0.41405 0.48662 0 13689000 9345400 4343600 2732 1188 1400 1552 4430 4430 2344;2976 IETDEEESCDNAHGDANQPAR 21 0 1 Phospho (STY) _IETDEEES(ph)CDNAHGDANQPAR_ IET(0.004)DEEES(0.996)CDNAHGDANQPAR IET(-23.52)DEEES(23.52)CDNAHGDANQPAR 0 0 1 0 Q96T23 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 813.6454 3 813.311456 2436.91254 66376.01 0.72683 0.00059114 -1.0652 -0.00086635 -0.33838 -0.00027521 813.645529042161 816.980684813117 20.842 0.69939 20.842 20.539 21.238 0 161 33 9 0 0 0 2.4001E-05 1 7651 41.423 38.185 2 1.1979 0.87995 0 24229000 10810000 13419000 2733 1188 1400 1552 4431 4431 2344;2976 IETDEEESCDNAHGDANQPAR 21 0 1 Phospho (STY) _IET(ph)DEEESCDNAHGDANQPAR_ IET(1)DEEESCDNAHGDANQPAR IET(46.22)DEEES(-46.22)CDNAHGDANQPAR 0 0 1 0 Q96T23 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 816.9821 3 813.311456 2436.91254 67226.03 0.63087 0.0005131 -0.23528 -0.00019136 0.39559 0.00032174 813.645723344429 816.981739371249 21.7 0.5932 21.7 21.48 22.073 0 217 28 12 0 0 0 1.8818E-29 2 8346 100.88 86.471 2 0.65907 0.44228 0 108500000 64634000 43871000 2734 1188 1400 1552 4432;4433 4433 2344;2976 IFDEILVNAADNK 13 1 0 Unmodified _IFDEILVNAADNK_ 0 0 0 0 P11388;J3KTB7;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 735.3914 2 731.382831 1460.75111 NaN NaN NaN -0.22704 -0.00016605 NaN NaN NaN NaN 112.56 0.32997 112.56 112.44 112.77 -7.6294E-06 0 0 0 0.00036318 2 66912 82.489 60.403 1 NaN NaN 0 7412100 0 7412100 2735 962;1032 1401 1553 4434;4435 4435 IFDEILVNAADNK 13 1 0 Unmodified _IFDEILVNAADNK_ 0 0 0 0 P11388;J3KTB7;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 735.3915 2 731.382831 1460.75111 71874.55 1.172 0.00085718 0.49433 0.00036154 1.6663 0.0012187 731.383151883784 735.390231241727 114.87 1.3909 114.87 114.3 115.69 0 619 126 8 0 0 0 0.00099896 3 74187 80.245 58.781 1 1.392 0.96006 0 24254000 11421000 12833000 2736 962;1032 1401 1553 4436;4437;4438 4438 IFPPETSASVAATPPPSTASAPAAVNSSASADK 33 1 0 Phospho (STY) _IFPPETSASVAAT(ph)PPPSTASAPAAVNSSASADK_ IFPPET(0.236)S(0.236)AS(0.236)VAAT(0.276)PPPS(0.007)T(0.007)AS(0.002)APAAVNSSASADK IFPPET(-0.68)S(-0.68)AS(-0.68)VAAT(0.68)PPPS(-15.87)T(-15.87)AS(-22.49)APAAVNS(-45.21)S(-45.06)AS(-44.9)ADK 0 0 1 0 B2R5W3;A0A024R3T8;P09874;B4E0E1 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1060.173 3 1059.83777 3176.49147 59749.1 1.2065 0.0012787 0.13719 0.0001454 1.3437 0.0014241 1060.17210444256 1062.84366433497 99.92 1.4175 99.92 99.252 100.67 0 816 113 11 0 0 0 1.2757E-18 1 57371 56.22 44.017 10 0.52333 0.64932 0 112000000 70956000 41048000 2737 81 1402 1554 4439 4439 2626 IGDEYAEDSSDEEDIR 16 0 1 Phospho (STY) _IGDEYAEDSS(ph)DEEDIR_ IGDEYAEDS(0.202)S(0.798)DEEDIR IGDEY(-84.11)AEDS(-5.97)S(5.97)DEEDIR 0 0 1 0 A0A075B729;B4DEN9;B2RDN4;A8K3R2;Q14137 A0A075B729 A0A075B729 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 966.8668 2 961.862397 1921.71024 62561.35 0.28833 0.00027734 0.22007 0.00021168 0.5084 0.00048901 962.363818888914 966.866723330341 66.342 0.88835 66.342 65.967 66.856 0 209 64 4 0 0 0 4.7645E-22 1 32048 113.65 98.115 3 1.1155 1.3709 0 30736000 15281000 15455000 2738 240 1403 1555 4440 4440 367;368 IGDEYAEDSSDEEDIR 16 0 1 Phospho (STY) _IGDEYAEDS(ph)SDEEDIR_ IGDEYAEDS(0.5)S(0.5)DEEDIR IGDEY(-48.29)AEDS(0)S(0)DEEDIR 0 0 1 0 A0A075B729;B4DEN9;B2RDN4;A8K3R2;Q14137 A0A075B729 A0A075B729 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 967.3688 2 961.862397 1921.71024 63357.08 0.81513 0.00078404 0.11567 0.00011126 0.9308 0.0008953 961.862429625284 966.866787361321 67.251 1.1169 67.251 66.86 67.977 0 485 99 7 0 0 0 9.4624E-05 1 42064 63.682 55.506 3 1.8154 1.345 0 22881000 7966300 14915000 2739 240 1403 1555 4441 4441 367;368 IGDEYAEDSSDEEDIR 16 0 1 2 Phospho (STY) _IGDEYAEDS(ph)S(ph)DEEDIR_ IGDEY(0.328)AEDS(0.836)S(0.836)DEEDIR IGDEY(-6.13)AEDS(6.13)S(6.13)DEEDIR 0 0 2 0 A0A075B729;B4DEN9;B2RDN4;A8K3R2;Q14137 A0A075B729 A0A075B729 BOP1 Ribosome biogenesis protein BOP1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1006.8498 2 1001.84556 2001.67657 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.262 1 68.262 67.762 68.762 0 0 0 0 0.0034624 1 33802 42.976 28.004 3 2740 240 1403 1556 4442 4442 367;368 IGDEYAEDSSDEEDIR 16 0 1 2 Phospho (STY) _IGDEYAEDS(ph)S(ph)DEEDIR_ IGDEY(0.023)AEDS(0.988)S(0.988)DEEDIR IGDEY(-19.23)AEDS(19.23)S(19.23)DEEDIR 0 0 2 0 A0A075B729;B4DEN9;B2RDN4;A8K3R2;Q14137 A0A075B729 A0A075B729 BOP1 Ribosome biogenesis protein BOP1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1006.8499 2 1001.84556 2001.67657 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.562 1 69.562 69.062 70.062 0 0 0 0 0.00032037 1 34641 55.546 40.574 3 2741 240 1403 1556 4443 4443 367;368 IGDEYAEDSSDEEDIR 16 0 1 2 Phospho (STY) _IGDEYAEDS(ph)S(ph)DEEDIR_ IGDEYAEDS(1)S(1)DEEDIR IGDEY(-74.63)AEDS(74.63)S(80.36)DEEDIR 0 0 2 0 A0A075B729;B4DEN9;B2RDN4;A8K3R2;Q14137 A0A075B729 A0A075B729 BOP1 Ribosome biogenesis protein BOP1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1001.8461 2 1001.84556 2001.67657 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.224 1 70.224 69.724 70.724 0 0 0 0 4.3965E-19 1 35077 135.55 117.63 3 2742 240 1403 1556 4444 4444 367;368 IGDEYAEDSSDEEDIR 16 0 1 2 Phospho (STY) _IGDEYAEDS(ph)S(ph)DEEDIR_ IGDEYAEDS(1)S(1)DEEDIR IGDEY(-79.15)AEDS(79.15)S(85.09)DEEDIR 0 0 2 0 A0A075B729;B4DEN9;B2RDN4;A8K3R2;Q14137 A0A075B729 A0A075B729 BOP1 Ribosome biogenesis protein BOP1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1006.8501 2 1001.84556 2001.67657 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.651 1 70.651 70.151 71.151 0 0 0 0 4.8503E-19 1 35353 135.23 115.51 3 2743 240 1403 1556 4445 4445 367;368 IGDEYAEDSSDEEDIR 16 0 1 2 Phospho (STY) _IGDEYAEDS(ph)S(ph)DEEDIR_ IGDEY(0.056)AEDS(0.972)S(0.972)DEEDIR IGDEY(-15.27)AEDS(15.27)S(15.27)DEEDIR 0 0 2 0 A0A075B729;B4DEN9;B2RDN4;A8K3R2;Q14137 A0A075B729 A0A075B729 BOP1 Ribosome biogenesis protein BOP1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1006.8511 2 1001.84556 2001.67657 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.424 1 71.424 70.924 71.924 0 0 0 0 0.00015967 1 35875 59.57 48.58 3 2744 240 1403 1556 4446 4446 367;368 IGDEYAEDSSDEEDIR 16 0 1 2 Phospho (STY) _IGDEYAEDS(ph)S(ph)DEEDIR_ IGDEYAEDS(1)S(1)DEEDIR IGDEY(-66.57)AEDS(66.79)S(66.57)DEEDIR 0 0 2 0 A0A075B729;B4DEN9;B2RDN4;A8K3R2;Q14137 A0A075B729 A0A075B729 BOP1 Ribosome biogenesis protein BOP1 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1001.8478 2 1001.84556 2001.67657 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.912 1 77.912 77.412 78.412 0 0 0 0 1.1688E-05 1 49763 97.129 79.429 3 2745 240 1403 1556 4447 4447 367;368 IGDEYAEDSSDEEDIR 16 0 1 2 Phospho (STY) _IGDEYAEDS(ph)S(ph)DEEDIR_ IGDEYAEDS(1)S(1)DEEDIR IGDEY(-40.05)AEDS(40.05)S(40.05)DEEDIR 0 0 2 0 A0A075B729;B4DEN9;B2RDN4;A8K3R2;Q14137 A0A075B729 A0A075B729 BOP1 Ribosome biogenesis protein BOP1 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1006.8505 2 1001.84556 2001.67657 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.312 1 78.312 77.812 78.812 0 0 0 0 6.3033E-07 1 50047 81.594 66.622 3 2746 240 1403 1556 4448 4448 367;368 IGEEQSAEDAEDGPPELLFIHGGHTAK 27 1 0 Unmodified _IGEEQSAEDAEDGPPELLFIHGGHTAK_ 0 0 0 0 E9PC52;Q6FHQ0;Q16576;A8K6A2;Q5JNZ6 E9PC52 E9PC52 RBBP7 Histone-binding protein RBBP7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 713.0937 4 712.591247 2846.33588 70835.73 1.1961 0.00085235 -0.28431 -0.0002026 0.91182 0.00064975 712.841765678417 714.845601548125 133.54 0.15239 133.54 133.45 133.6 0 36 5 10 0 0 0 0.015346 1 81361 14.854 14.854 1 0.91966 1.1652 0 32610000 16928000 15682000 2747 798 1404 1557 4449 4449 IGEEQSAEDAEDGPPELLFIHGGHTAK 27 1 0 Unmodified _IGEEQSAEDAEDGPPELLFIHGGHTAK_ 0 0 0 0 E9PC52;Q6FHQ0;Q16576;A8K6A2;Q5JNZ6 E9PC52 E9PC52 RBBP7 Histone-binding protein RBBP7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 714.8466 4 712.591247 2846.33588 70704.8 0.64814 0.00046186 0.3628 0.00025853 1.0109 0.00072039 713.09282950526 714.845933086711 145.78 0.39157 145.78 145.57 145.97 -1.5259E-05 145 18 12 0 0 0 1.7109E-13 2 84062 59.661 59.661 1 0.99688 1.2632 0 32872000 15878000 16994000 2748 798 1404 1557 4450;4451 4451 IGEEQSAEDAEDGPPELLFIHGGHTAK 27 1 0 Unmodified _IGEEQSAEDAEDGPPELLFIHGGHTAK_ 0 0 0 0 E9PC52;Q6FHQ0;Q16576;A8K6A2;Q5JNZ6 E9PC52 E9PC52 RBBP7 Histone-binding protein RBBP7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 952.4597 3 949.785904 2846.33588 61598.11 0.60971 0.0005791 -0.096206 -9.1375E-05 0.51351 0.00048772 950.120092315081 952.791438036015 145.77 0.25061 145.77 145.64 145.89 0 77 11 10 0 0 0 0.031046 1 84071 12.939 12.939 1 0.91822 1.0871 0 4555700 2379800 2175900 2749 798 1404 1557 4452 4452 IGEEQSPEDAEDGPPELLFIHGGHTAK 27 1 0 Unmodified _IGEEQSPEDAEDGPPELLFIHGGHTAK_ 0 0 0 0 H0YEU5;B4DRT0;H0YCT5;H0YF10;H0YDK2;Q09028 H0YEU5 H0YEU5 RBBP4 Histone-binding protein RBBP4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 719.346 4 719.095159 2872.35153 70248.23 1.1423 0.00082142 -0.26506 -0.0001906 0.87724 0.00063082 719.345649631608 721.348939697474 133.52 0.19191 133.52 133.41 133.6 0 40 7 10 0 0 0 0.0055537 1 81358 20.455 20.455 1 0.79092 1.0022 0 32757000 17894000 14863000 2750 655 1405 1558 4453 4453 IGEEQSPEDAEDGPPELLFIHGGHTAK 27 1 0 Unmodified _IGEEQSPEDAEDGPPELLFIHGGHTAK_ 0 0 0 0 H0YEU5;B4DRT0;H0YCT5;H0YF10;H0YDK2;Q09028 H0YEU5 H0YEU5 RBBP4 Histone-binding protein RBBP4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 721.0988 4 719.095159 2872.35153 70305.65 0.62334 0.00044824 0.12691 9.1258E-05 0.75024 0.0005395 719.346129365096 721.349665209564 145.66 0.41093 145.66 145.44 145.85 0 110 15 12 0 0 0 1.44E-17 2 83981 63.701 63.701 1 0.67377 0.81081 0 16034000 8484400 7550100 2751 655 1405 1558 4454;4455 4454 IGEGTYGVVYK 11 1 0 Phospho (STY) _IGEGTY(ph)GVVYK_ IGEGT(0.122)Y(0.877)GVVY(0.001)K IGEGT(-8.56)Y(8.56)GVVY(-29.39)K 0 0 1 0 G3V317;B7Z3D6;K7ELV5;E5RIU6;A0A087WZZ9;I6L9I5;E7ESI2;B4DDL9;A0A024QZJ8;A0A024RB10;A0A024QZP7;A0A024RB77;Q5H9N4;A0A024R8R3;G3V5T9;P06493;P24941;Q00526 G3V317 G3V317 CDK2;CDK3;CDK1;CDC2;DKFZp686L20222 Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 633.295 2 633.294311 1264.57407 76487.29 0.61431 0.00038904 0.93867 0.00059446 1.553 0.0009835 633.294205171354 637.30136658556 71.062 1.4446 71.062 70.394 71.838 0 615 136 7 0 0 0 6.9306E-06 3 35858 94.692 24.195 3 0.69329 0.86523 0 69040000 38366000 30673000 2752 16 1406 1559 4456;4457;4458 4457 2615;3013 IGEGTYGVVYK 11 1 0 Phospho (STY) _IGEGTY(ph)GVVYK_ IGEGT(0.149)Y(0.849)GVVY(0.002)K IGEGT(-7.56)Y(7.56)GVVY(-25.51)K 0 0 1 0 G3V317;B7Z3D6;K7ELV5;E5RIU6;A0A087WZZ9;I6L9I5;E7ESI2;B4DDL9;A0A024QZJ8;A0A024RB10;A0A024QZP7;A0A024RB77;Q5H9N4;A0A024R8R3;G3V5T9;P06493;P24941;Q00526 G3V317 G3V317 CDK2;CDK3;CDK1;CDC2;DKFZp686L20222 Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 633.295 2 633.294311 1264.57407 76952.63 1.1642 0.00073728 0.23374 0.00014803 1.3979 0.00088531 633.294485016089 637.301384467137 69.934 1.4794 69.934 68.971 70.451 0 442 126 6 0 0 0 0.0034263 1 44369 63.816 19.499 3 0.60861 0.46139 0 10926000 6974800 3951300 2753 16 1406 1559 4459 4459 2615;3013 IGEGTYGVVYK 11 1 0 2 Phospho (STY) _IGEGT(ph)Y(ph)GVVYK_ IGEGT(0.999)Y(0.967)GVVY(0.034)K IGEGT(29.68)Y(14.61)GVVY(-14.61)K 0 0 2 0 G3V317;B7Z3D6;K7ELV5;E5RIU6;A0A087WZZ9;I6L9I5;E7ESI2;B4DDL9;A0A024QZJ8;A0A024RB10;A0A024QZP7;A0A024RB77;Q5H9N4;A0A024R8R3;G3V5T9;P06493;P24941;Q00526 G3V317 G3V317 CDK2;CDK3;CDK1;CDC2;DKFZp686L20222 Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 672.9664 2 673.277477 1344.5404 74457.41 0.77119 0.00051922 0.19041 0.0001282 0.9616 0.00064742 673.277566176464 677.284756981404 76.221 1.2419 76.221 75.473 76.715 0 381 108 5 0 0 0 0.027759 1 39739 41.317 15.612 3 0.59948 0.75754 0 46006000 28553000 17453000 2754 16 1406 1560 4460 4460 2615;3013 IGKPHTVPCK 10 2 0 Unmodified _IGKPHTVPCK_ 0 0 0 1 H0YEN5;Q8J014;Q8N5L9;Q3KQT6;P15880;I3L404;E9PPT0;Q8NI61;E9PM36;E9PMM9;Q6IPX5 H0YEN5 H0YEN5 RPS2;rps2;OK/KNS-cl.7 40S ribosomal protein S2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 379.5464 3 379.546343 1135.6172 96661.89 -0.034189 -1.2976E-05 0.067175 2.5496E-05 0.032986 1.252E-05 379.546295935767 384.889151384557 15.468 0.26369 15.468 15.336 15.599 0 46 8 7 0 0 0 0.010685 1 3092 67.334 52.66 1 0.79464 0.65616 0 15072000 8370800 6701000 2755 858 1407 1561 4461 4461 IGPLGLSPK 9 1 0 Phospho (STY) _IGPLGLS(ph)PK_ IGPLGLS(1)PK IGPLGLS(91.31)PK 0 0 1 0 Q59FI9;P30050;D3DS95;Q76P68 Q59FI9 Q59FI9 RPL12;hCG_21173;cICK0721Q.2 60S ribosomal protein L12 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 481.26 2 481.259543 960.504534 87006.17 1.2207 0.00058746 0.20054 9.6512E-05 1.4212 0.00068397 481.259540660958 485.266650443172 100.81 1.6356 100.81 99.956 101.59 0 535 127 6 0 0 0 8.6624E-05 4 57320 91.313 48.42 1 1.412 1.7476 0 216690000 87199000 129490000 2756 982 1408 1562 4462;4463;4464;4465 4462 1739 IGPLGLSPK 9 1 0 Phospho (STY) _IGPLGLS(ph)PK_ IGPLGLS(1)PK IGPLGLS(93.35)PK 0 0 1 0 Q59FI9;P30050;D3DS95;Q76P68 Q59FI9 Q59FI9 RPL12;hCG_21173;cICK0721Q.2 60S ribosomal protein L12 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 481.2596 2 481.259543 960.504534 86922.27 0.68928 0.00033172 -0.16815 -8.0923E-05 0.52113 0.0002508 481.259374924456 485.26646008889 103.37 1.49 103.37 102.65 104.14 0 701 144 7 0 0 0 7.2608E-05 4 66652 93.345 50.628 1 0.92821 0.60325 0 37750000 19072000 18677000 2757 982 1408 1562 4466;4467;4468;4469 4469 1739 IGPLGLSPKK 10 2 0 Phospho (STY) _IGPLGLS(ph)PKK_ IGPLGLS(1)PKK IGPLGLS(51.36)PKK 0 0 1 1 Q59FI9;P30050;D3DS95;Q76P68 Q59FI9 Q59FI9 RPL12;hCG_21173;cICK0721Q.2 60S ribosomal protein L12 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 553.3221 2 545.307025 1088.5995 83145.65 0.90071 0.00049116 -0.10504 -5.7277E-05 0.79567 0.00043388 545.306899534292 553.321099226966 75.144 1.0298 75.144 74.589 75.619 0 368 90 6 0 0 0 0.0049138 2 48004 51.359 28.718 1 0.89561 0.72232 0 26906000 14254000 12652000 2758 982 1409 1563 4470;4471 4471 1739 IGVPSATEIIK 11 1 0 Phospho (STY) _IGVPS(ph)ATEIIK_ IGVPS(0.869)AT(0.131)EIIK IGVPS(8.2)AT(-8.2)EIIK 0 0 1 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 608.3281 2 604.320329 1206.62611 78743.48 0.92223 0.00055732 -0.28061 -0.00016958 0.64162 0.00038775 604.319946634028 608.327282160828 112.39 0.58862 112.39 112.12 112.71 -7.6294E-06 193 54 5 0 0 0 0.0012808 1 66513 78.692 47.618 2 0.89095 1.098 0 22945000 11738000 11207000 2759 1214 1410 1564 4472 4472 2440 IGVPSATEIIK 11 1 0 Phospho (STY) _IGVPS(ph)ATEIIK_ IGVPS(0.793)AT(0.207)EIIK IGVPS(5.83)AT(-5.83)EIIK 0 0 1 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 608.3281 2 604.320329 1206.62611 78626.57 1.0906 0.00065906 0.096114 5.8083E-05 1.1867 0.00071714 604.320241824925 608.327439034582 119.48 0.93573 119.48 118.99 119.93 -7.6294E-06 296 81 5 0 0 0 0.017432 1 76830 42.976 24.196 2 1.5319 1.1249 0 19848000 7910400 11937000 2760 1214 1410 1564 4473 4473 2440 IHAESLLLDSPAVAK 15 1 0 Phospho (STY) _IHAESLLLDS(ph)PAVAK_ IHAESLLLDS(1)PAVAK IHAES(-64.75)LLLDS(64.75)PAVAK 0 0 1 0 Q9H4L5 Q9H4L5 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 822.4245 2 822.423845 1642.83314 69208.41 0.76944 0.0006328 0.1181 9.7126E-05 0.88754 0.00072993 822.423290260781 826.431255718333 111.23 0.79662 111.23 111.01 111.81 -7.6294E-06 260 68 6 0 0 0 2.4529E-41 2 65724 149.22 133.68 2 0.98237 1.2466 0 38701000 15711000 22990000 2761 1205 1411 1565 4474;4475 4475 2399 IHAESLLLDSPAVAK 15 1 0 Phospho (STY) _IHAESLLLDS(ph)PAVAK_ IHAESLLLDS(1)PAVAK IHAES(-44.92)LLLDS(44.92)PAVAK 0 0 1 0 Q9H4L5 Q9H4L5 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 548.618 3 548.618322 1642.83314 83898.63 0.5278 0.00028956 -0.025087 -1.3763E-05 0.50271 0.0002758 548.952831950257 551.289601476544 111.23 0.74877 111.23 110.96 111.71 -7.6294E-06 169 65 5 0 0 0 0.00045818 2 65746 62.203 62.203 2 1.407 1.7799 0 31806000 15986000 15821000 2762 1205 1411 1565 4476;4477 4477 2399 IHAESLLLDSPAVAK 15 1 0 Phospho (STY) _IHAESLLLDS(ph)PAVAK_ IHAESLLLDS(1)PAVAK IHAES(-40.8)LLLDS(40.8)PAVAK 0 0 1 0 Q9H4L5 Q9H4L5 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 548.6187 3 548.618322 1642.83314 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.94 1 105.94 105.44 106.44 0 0 0 0 0.00048493 1 68126 50.722 35.622 2 2763 1205 1411 1565 4478 4478 2399 IHFSPSEPK 9 1 0 Phospho (STY) _IHFS(ph)PSEPK_ IHFS(0.947)PS(0.053)EPK IHFS(12.5)PS(-12.5)EPK 0 0 1 0 B3KWI2;Q8IZT6 B3KWI2 B3KWI2 ASPM Abnormal spindle-like microcephaly-associated protein MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 561.256 2 561.254989 1120.49543 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.739 1 73.739 73.239 74.239 0 0 0 0 0.003099 1 37644 65.627 38.655 2 2764 606 1412 1566 4479 4479 997 IHFSPSEPK 9 1 0 Phospho (STY) _IHFS(ph)PSEPK_ IHFS(0.743)PS(0.257)EPK IHFS(4.62)PS(-4.62)EPK 0 0 1 0 B3KWI2;Q8IZT6 B3KWI2 B3KWI2 ASPM Abnormal spindle-like microcephaly-associated protein MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 561.254 2 561.254989 1120.49543 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.788 1 73.788 73.288 74.288 0 0 0 0 0.0034602 1 37674 63.32 29.43 2 2765 606 1412 1566 4480 4480 997 IHGVGFK 7 1 0 Unmodified _IHGVGFK_ 0 0 0 0 H7C2W9;C9JU56;B7Z4E3;B2R4C1;B7Z4C8;P62899;B8ZZK4 H7C2W9 H7C2W9 RPL31 60S ribosomal protein L31 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 383.2281 2 379.221406 756.428259 NaN NaN NaN -0.092872 -3.5219E-05 NaN NaN NaN NaN 93.057 1.4757 93.057 92.279 93.755 -7.6294E-06 0 0 0 0.00016772 1 51356 85.306 48.719 1 NaN NaN 0 76584000 0 76584000 2766 526 1413 1567 4481 4481 IHGVGFK 7 1 0 Unmodified _IHGVGFK_ 0 0 0 0 H7C2W9;C9JU56;B7Z4E3;B2R4C1;B7Z4C8;P62899;B8ZZK4 H7C2W9 H7C2W9 RPL31 60S ribosomal protein L31 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 383.2281 2 379.221406 756.428259 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.929 1 90.929 90.429 91.429 7.6294E-06 0 0 0 0.032028 1 50122 72.021 32.046 1 2767 526 1413 1567 4482 4482 IHIPGGLSPESK 12 1 0 Phospho (STY) _IHIPGGLS(ph)PESK_ IHIPGGLS(0.837)PES(0.163)K IHIPGGLS(7.1)PES(-7.1)K 0 0 1 0 P57772 P57772 P57772 EEFSEC Selenocysteine-specific elongation factor MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 661.836 2 657.82631 1313.63807 80459.45 1.3893 0.00091393 0.27491 0.00018084 1.6642 0.0010948 657.826136232943 661.834148729511 96.858 0.55859 96.858 96.544 97.103 0 91 44 4 0 0 0 0.013201 1 54823 43.382 43.382 2 1.4909 1.7962 0 16434000 8663900 7770100 2768 1012 1414 1568 4483 4483 1843 IHIPGGLSPESK 12 1 0 Phospho (STY) _IHIPGGLS(ph)PESK_ IHIPGGLS(0.932)PES(0.068)K IHIPGGLS(11.39)PES(-11.39)K 0 0 1 0 P57772 P57772 P57772 EEFSEC Selenocysteine-specific elongation factor MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 657.8281 2 657.82631 1313.63807 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.672 1 96.672 96.172 97.172 0 0 0 0 0.0011496 1 54552 54.023 33.816 2 2769 1012 1414 1568 4484 4484 1843 IHIPGGLSPESK 12 1 0 Phospho (STY) _IHIPGGLS(ph)PESK_ IHIPGGLS(0.801)PES(0.199)K IHIPGGLS(6.04)PES(-6.04)K 0 0 1 0 P57772 P57772 P57772 EEFSEC Selenocysteine-specific elongation factor MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 657.8295 2 657.82631 1313.63807 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.711 1 96.711 96.211 97.211 0 0 0 0 8.7068E-05 1 54578 69.451 46.225 2 2770 1012 1414 1568 4485 4485 1843 IHNVGSPLK 9 1 0 Phospho (STY) _IHNVGS(ph)PLK_ IHNVGS(1)PLK IHNVGS(113.38)PLK 0 0 1 0 A0A087WWJ1;Q1L838;P52701 A0A087WWJ1 A0A087WWJ1 MSH6;GTBP DNA mismatch repair protein Msh6 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 522.7654 2 522.765524 1043.5165 84279.41 0.71548 0.00037403 -0.14164 -7.4044E-05 0.57384 0.00029998 522.765404937079 526.772538579151 30.416 0.49895 30.416 30.186 30.685 1.9073E-06 183 37 7 0 0 0 6.3271E-05 2 15794 113.38 82.692 1 0.46332 0.33766 0 20254000 14247000 6006900 2771 259 1415 1569 4486;4487 4486 415 IHQEGDALPGHSK 13 1 0 Unmodified _IHQEGDALPGHSK_ 0 0 0 0 Q1ED39;H3BPL4 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 463.5684 3 463.568752 1387.68443 87338.7 0.30846 0.00014299 -0.28892 -0.00013393 0.019543 9.0594E-06 463.568455565937 466.240062010984 80.134 0.82597 80.134 79.685 80.511 7.6294E-06 336 75 6 0 0 0 0.0054423 2 42154 38.399 29.292 1 0.85646 1.0643 0 92189000 52715000 39474000 2772 1082 1416 1570 4488;4489 4488 IHSPIIR 7 0 1 Phospho (STY) _IHS(ph)PIIR_ IHS(1)PIIR IHS(43.73)PIIR 0 0 1 0 O60885 O60885 O60885 BRD4 Bromodomain-containing protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 305.8318 3 305.831911 914.473902 110574.8 -0.31135 -9.5222E-05 0.26177 8.0056E-05 -0.049587 -1.5165E-05 305.831964715171 309.168030006581 67.677 0.43729 67.677 67.516 67.953 0 85 35 4 0 0 0 0.022702 1 33292 43.734 18.48 1 0.5097 0.61833 0 20068000 12392000 7676000 2773 932 1417 1571 4490 4490 1587 IHVIDHSGAR 10 0 1 Unmodified _IHVIDHSGAR_ 0 0 0 0 K7EP07;K7EK42;Q99426 K7EP07 K7EP07 TBCB Tubulin-folding cofactor B MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 372.2045 3 368.868473 1103.58359 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.033 1 95.033 94.533 95.533 7.6294E-06 0 0 0 0.014227 1 53318 57.785 23.398 1 2774 903 1418 1572 4491 4491 IIAPPERK 8 1 1 Unmodified _IIAPPERK_ 0 0 0 1 B4E335;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;V9HVZ7;Q562R1;Q96DE1;Q96FU6;F1BXA6;A4UCT3;A5GZ75;B3KPP5;B4E3A4;P63261;B4DVQ0;B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;Q7Z7J6;A6NL76;B4DUI8 B4E335;B4E3A4;B7Z6P1 B4E3A4 PS1TP5BP1;ACTB;ACTG1;HEL-176;ACTBL2;ACTA2;ACTG2;ACTA1;ACTC1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Beta-actin-like protein 2;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 314.5349 3 308.527277 922.560001 107658.6 -0.41577 -0.00012828 0.57046 0.000176 0.15469 4.7726E-05 308.527387799966 314.534884814083 67.826 1.3161 67.826 67.634 68.95 0 306 119 7 0 0 0 0.010979 2 33426 37.727 17.102 1 2.3715 2.8629 0 231890000 67134000 164760000 2775 683;685;711 1419 1573 4492;4493 4493 IIAPPERK 8 1 1 Unmodified _IIAPPERK_ 0 0 0 1 B4E335;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;V9HVZ7;Q562R1;Q96DE1;Q96FU6;F1BXA6;A4UCT3;A5GZ75;B3KPP5;B4E3A4;P63261;B4DVQ0;B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B3KW67;Q7Z7J6;A6NL76;B4DUI8 B4E335;B4E3A4;B7Z6P1 B4E3A4 PS1TP5BP1;ACTB;ACTG1;HEL-176;ACTBL2;ACTA2;ACTG2;ACTA1;ACTC1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Beta-actin-like protein 2;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 471.2985 2 462.287277 922.560001 90355.94 0.21237 9.8177E-05 0.026721 1.2353E-05 0.23909 0.00011053 462.287218239193 471.298423560834 67.822 0.51283 67.822 67.674 68.187 0 119 41 4 0 0 0 0.019363 1 33468 79.116 55.144 1 2.0594 2.436 0 48304000 15046000 33258000 2776 683;685;711 1419 1573 4494 4494 IIDVVYNASNNELVR 15 0 1 Unmodified _IIDVVYNASNNELVR_ 0 0 0 0 Q5JR95;Q5JR94;P62241 Q5JR95 Q5JR95 RPS8 40S ribosomal protein S8 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 859.958 2 859.957226 1717.8999 NaN NaN NaN NaN NaN NaN NaN NaN NaN 107.32 1 107.32 106.82 107.82 0 0 0 0 0.0010656 1 62624 100.55 75.168 1 2777 1016 1420 1574 4495 4495 IIDVVYNASNNELVR 15 0 1 Unmodified _IIDVVYNASNNELVR_ 0 0 0 0 Q5JR95;Q5JR94;P62241 Q5JR95 Q5JR95 RPS8 40S ribosomal protein S8 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 860.4603 2 859.957226 1717.8999 NaN NaN NaN 0.12168 0.00010464 NaN NaN NaN NaN 109.04 0.26195 109.04 108.99 109.25 0 0 0 0 0.00025192 1 70173 57.164 45.298 1 NaN NaN 0 2688200 2688200 0 2778 1016 1420 1574 4496 4496 IIEQLSPQAATSR 13 0 1 Phospho (STY) _IIEQLS(ph)PQAATSR_ IIEQLS(1)PQAATSR IIEQLS(38.14)PQAAT(-38.14)S(-45.64)R 0 0 1 0 A0JP10;Q03468;D6R9X7;A8K4Q3 A0JP10;A8K4Q3 A0JP10 ERCC6;hCG_32740 DNA excision repair protein ERCC-6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 747.3725 2 747.371613 1492.72867 70516.52 0.83752 0.00062594 -0.17974 -0.00013433 0.65779 0.00049161 747.371484962139 752.375615407717 74.852 1.235 74.852 74.359 75.594 0 547 108 6 0 0 0 8.267E-26 4 38645 142.38 111.65 3 0.80545 1.0168 0 90393000 51290000 39102000 2779 399;463 1421 1575 4497;4498;4499;4500 4499 679 IIEQLSPQAATSR 13 0 1 Phospho (STY) _IIEQLS(ph)PQAATSR_ IIEQLS(1)PQAATSR IIEQLS(39.95)PQAAT(-41.79)S(-39.95)R 0 0 1 0 A0JP10;Q03468;D6R9X7;A8K4Q3 A0JP10;A8K4Q3 A0JP10 ERCC6;hCG_32740 DNA excision repair protein ERCC-6 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 747.3727 2 747.371613 1492.72867 69533.55 1.0944 0.00081789 0.019877 1.4855E-05 1.1142 0.00083274 747.371844540518 752.375468087187 76.317 1.2628 76.317 75.747 77.01 0 692 118 9 0 0 0 2.5508E-07 2 48536 100.11 76.994 3 1.7155 1.1486 0 121370000 48019000 73346000 2780 399;463 1421 1575 4501;4502 4502 679 IIIENKPK 8 2 0 Unmodified _IIIENKPK_ 0 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 477.8028 2 477.80276 953.590967 90269.63 0.27293 0.0001304 -0.10575 -5.053E-05 0.16717 7.9875E-05 477.802665213183 485.816783798956 72.177 0.71523 72.177 71.66 72.375 0 224 61 6 0 0 0 0.015181 1 36432 77.674 30.607 1 0.7258 0.9195 0 68141000 39992000 28149000 2781 962 1422 1576 4503 4503 IILDLISESPIK 12 1 0 Phospho (STY) _IILDLISES(ph)PIK_ IILDLIS(0.045)ES(0.955)PIK IILDLIS(-13.22)ES(13.22)PIK 0 0 1 0 Q5T6W2;B4DUQ1;B4DFF1;A0A024R228;Q5EC54;P61978 Q5T6W2 Q5T6W2 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 714.8956 2 710.888576 1419.7626 72409.14 0.79491 0.00056509 -0.011292 -8.0274E-06 0.78361 0.00055706 710.888555953085 714.895618413032 130.44 1.1918 130.44 130.08 131.27 0 683 110 10 0 0 0 2.9932E-25 4 79637 141.54 131.23 2 1.882 2.3294 0 219450000 76451000 143000000 2782 56 1423 1577 4504;4505;4506;4507 4506 68;69 IILDLISESPIK 12 1 0 Phospho (STY) _IILDLISES(ph)PIK_ IILDLIS(0.132)ES(0.868)PIK IILDLIS(-8.19)ES(8.19)PIK 0 0 1 0 Q5T6W2;B4DUQ1;B4DFF1;A0A024R228;Q5EC54;P61978 Q5T6W2 Q5T6W2 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 714.8962 2 710.888576 1419.7626 72745.27 0.67419 0.00047927 -0.025121 -1.7858E-05 0.64906 0.00046141 710.889142628266 714.895532713347 145.27 0.11497 145.27 145.25 145.37 0 13 3 6 0 0 0 5.1202E-05 1 83660 90.731 90.731 2 1.9937 2.372 0 11870000 4090500 7779300 2783 56 1423 1577 4508 4508 68;69 IILDLISESPIK 12 1 0 Phospho (STY) _IILDLIS(ph)ESPIK_ IILDLIS(0.5)ES(0.5)PIK IILDLIS(0)ES(0)PIK 0 0 1 0 Q5T6W2;B4DUQ1;B4DFF1;A0A024R228;Q5EC54;P61978 Q5T6W2 Q5T6W2 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 714.8327 2 710.888576 1419.7626 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.42 1 131.42 130.92 131.92 0 0 0 0 0.00015011 1 79945 66.498 29.804 2 2784 56 1423 1577 4509 4509 68;69 IILDLISESPIK 12 1 0 Phospho (STY) _IILDLIS(ph)ESPIK_ IILDLIS(0.5)ES(0.5)PIK IILDLIS(0)ES(0)PIK 0 0 1 0 Q5T6W2;B4DUQ1;B4DFF1;A0A024R228;Q5EC54;P61978 Q5T6W2 Q5T6W2 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 714.8953 2 710.888576 1419.7626 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.69 1 131.69 131.19 132.19 0 0 0 0 0.0015048 1 80113 53.252 16.558 2 2785 56 1423 1577 4510 4510 68;69 IILDLISESPIK 12 1 0 Phospho (STY) _IILDLISES(ph)PIK_ IILDLISES(1)PIK IILDLIS(-55.77)ES(55.77)PIK 0 0 1 0 Q5T6W2;B4DUQ1;B4DFF1;A0A024R228;Q5EC54;P61978 Q5T6W2 Q5T6W2 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 714.8965 2 710.888576 1419.7626 71786.13 1.0241 0.00072801 -0.0019802 -1.4077E-06 1.0221 0.0007266 710.888552081136 714.895637988824 134.79 0.22229 134.79 134.68 134.9 0 26 5 8 0 0 0 6.613E-111 2 87072 211.77 199.16 2 1.4032 0.91904 0 50198000 20920000 29279000 2786 56 1423 1577 4511;4512 4511 68;69 IIPELVGSPTQSTSSR 16 0 1 Phospho (STY) _IIPELVGS(ph)PTQSTSSR_ IIPELVGS(0.994)PT(0.006)QSTSSR IIPELVGS(22.26)PT(-22.26)QS(-37.12)T(-44.09)S(-41.89)S(-49.28)R 0 0 1 0 Q9NSI6;Q5R2U7;H7C409 Q9NSI6 Q9NSI6 BRWD1;WDR9 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 876.4332 2 876.432399 1750.85024 64911.07 1.58 0.0013848 0.33955 0.00029759 1.9196 0.0016824 876.432616470323 881.436834590259 100.75 1.5858 100.75 99.933 101.52 7.6294E-06 819 123 10 0 0 0 5.3407E-73 4 57981 171.26 124.08 6 0.77135 0.97574 0 285060000 158040000 127020000 2787 1218 1424 1578 4513;4514;4515;4516 4516 2454 IIPELVGSPTQSTSSR 16 0 1 Phospho (STY) _IIPELVGS(ph)PTQSTSSR_ IIPELVGS(0.831)PT(0.125)QS(0.007)T(0.01)S(0.014)S(0.014)R IIPELVGS(8.24)PT(-8.24)QS(-20.86)T(-19.35)S(-17.78)S(-17.78)R 0 0 1 0 Q9NSI6;Q5R2U7;H7C409 Q9NSI6 Q9NSI6 BRWD1;WDR9 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 881.4374 2 876.432399 1750.85024 65275.62 1.0494 0.00091972 0.093164 8.1652E-05 1.1426 0.0010014 876.432467768531 881.436622289004 105.85 2.2237 105.85 105.08 107.3 0 1291 208 10 0 0 0 8.3172E-07 4 68170 79.837 59.827 6 1.56 1.0338 0 202950000 79869000 123080000 2788 1218 1424 1578 4517;4518;4519;4520 4520 2454 IIYDSDSESEETLQVK 16 1 0 2 Phospho (STY) _IIYDS(ph)DS(ph)ESEETLQVK_ IIY(0.043)DS(0.953)DS(0.806)ES(0.191)EET(0.007)LQVK IIY(-15.88)DS(15.37)DS(6.65)ES(-6.65)EET(-21.87)LQVK 0 0 2 0 P35251;D6RAD2;E0CX09 P35251 P35251 RFC1 Replication factor C subunit 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1008.9122 2 1008.41034 2014.80613 59954.32 0.17554 0.00017701 -0.65889 -0.00066443 -0.48335 -0.00048742 1008.91156068497 1012.41735772224 98.909 1.4507 98.909 98.146 99.597 0 971 122 12 0 0 0 2.5663E-06 2 56060 72.898 59.697 10 0.32222 0.39841 0 351060000 266670000 84387000 2789 986 1425 1579 4521;4522 4521 1744;1745;1746;3023 IIYDSDSESEETLQVK 16 1 0 Phospho (STY) _IIYDS(ph)DSESEETLQVK_ IIY(0.033)DS(0.935)DS(0.03)ES(0.002)EETLQVK IIY(-14.51)DS(14.51)DS(-14.87)ES(-27.12)EET(-44.89)LQVK 0 0 1 0 P35251;D6RAD2;E0CX09 P35251 P35251 RFC1 Replication factor C subunit 1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 972.4356 2 968.427176 1934.8398 NaN NaN NaN 0.50426 0.00048834 NaN NaN NaN NaN 90.931 0.97456 90.931 90.236 91.21 0 0 0 0 2.4945E-15 1 49959 101.42 81.214 5 NaN NaN 0 15755000 0 15755000 2790 986 1425 1580 4523 4523 1744;1745;1746;3023 IIYDSDSESEETLQVK 16 1 0 Phospho (STY) _IIYDS(ph)DSESEETLQVK_ IIY(0.002)DS(0.975)DS(0.023)ESEETLQVK IIY(-27.63)DS(16.34)DS(-16.34)ES(-34.2)EET(-56.98)LQVK 0 0 1 0 P35251;D6RAD2;E0CX09 P35251 P35251 RFC1 Replication factor C subunit 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 972.9366 2 968.427176 1934.8398 61141.18 0.58661 0.00056809 -0.58925 -0.00057064 -0.0026367 -2.5535E-06 968.929036480196 972.432026981026 96.181 1.2573 96.181 95.451 96.708 0 476 124 7 0 0 0 3.0471E-22 1 61864 115.82 97.452 5 0.73239 0.47691 0 40849000 17771000 23078000 2791 986 1425 1580 4524 4524 1744;1745;1746;3023 IIYDSDSESEETLQVK 16 1 0 3 Phospho (STY) _IIY(ph)DS(ph)DSES(ph)EETLQVK_ IIY(0.678)DS(0.678)DS(0.678)ES(0.953)EET(0.014)LQVK IIY(0)DS(0)DS(0)ES(9.55)EET(-18.89)LQVK 0 0 3 0 P35251;D6RAD2;E0CX09 P35251 P35251 RFC1 Replication factor C subunit 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1048.8953 2 1048.39351 2094.77246 NaN NaN NaN 0.08992 9.4271E-05 NaN NaN NaN NaN 105.51 0.62711 105.51 105.13 105.76 -7.6294E-06 0 0 0 5.8008E-07 2 61167 69.979 54.44 10 NaN NaN 0 8607400 8607400 0 2792 986 1425 1581 4525;4526 4526 1744;1745;1746;3023 IKGSSPGIQDTLEAEDGAFETDEAPEDR 28 1 1 2 Phospho (STY) _IKGS(ph)S(ph)PGIQDTLEAEDGAFETDEAPEDR_ IKGS(0.842)S(0.842)PGIQDT(0.314)LEAEDGAFET(0.003)DEAPEDR IKGS(6.41)S(6.41)PGIQDT(-6.41)LEAEDGAFET(-28.17)DEAPEDR 0 0 2 1 Q5TDG3;Q9UNX4 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1052.7765 3 1046.43391 3136.27989 59241.72 0.60099 0.00062889 -0.42205 -0.00044165 0.17893 0.00018724 1046.7675229903 1052.77509987568 110.17 0.53671 110.17 109.86 110.39 0 250 46 8 0 0 0 1.2275E-10 2 64916 51.22 43.624 6 0.32922 0.3889 0 46540000 34192000 12349000 2793 1107 1426 1582 4527;4528 4527 2096;2097 IKNENTEGSPQEDGVELEGLK 21 2 0 Phospho (STY) _IKNENTEGS(ph)PQEDGVELEGLK_ IKNENTEGS(1)PQEDGVELEGLK IKNENT(-34.56)EGS(34.56)PQEDGVELEGLK 0 0 1 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 789.6983 3 789.363486 2365.06863 67421.94 0.85541 0.00067523 -0.41088 -0.00032434 0.44453 0.0003509 789.697279974659 794.70634143397 87.385 1.2253 87.385 86.804 88.029 0 348 114 6 0 0 0 4.3613E-30 3 47455 108.49 99.435 2 0.73636 0.924 0 48476000 30758000 17717000 2794 962 1427 1583 4529;4530;4531 4530 1694;2874 IKNENTEGSPQEDGVELEGLK 21 2 0 Phospho (STY) _IKNENTEGS(ph)PQEDGVELEGLK_ IKNENTEGS(1)PQEDGVELEGLK IKNENT(-57.26)EGS(57.26)PQEDGVELEGLK 0 0 1 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 789.6987 3 789.363486 2365.06863 66069.3 0.70437 0.00055601 -1.6447 -0.0012983 -0.94035 -0.00074228 789.696753869118 795.038924381776 92.038 2.7827 92.038 90.727 93.51 0 1713 239 14 0 0 0 8.005E-88 6 50640 164.83 154.29 2 0.81912 1.1578 0 3342700000 1844800000 1497900000 2795 962 1427 1583 4532;4533;4534;4535;4536;4537 4533 1694;2874 IKNENTEGSPQEDGVELEGLK 21 2 0 Phospho (STY) _IKNENTEGS(ph)PQEDGVELEGLK_ IKNENT(0.116)EGS(0.884)PQEDGVELEGLK IKNENT(-8.82)EGS(8.82)PQEDGVELEGLK 0 0 1 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1192.5514 2 1183.54159 2365.06863 54730.8 0.011076 1.3109E-05 -1.124 -0.0013303 -1.1129 -0.0013172 1184.04206064321 1192.05569268346 92.028 1.4507 92.028 91.301 92.751 7.6294E-06 1097 126 11 0 0 0 1.4493E-14 3 51501 73.91 53.447 2 0.80882 1.1001 0 852030000 457800000 394240000 2796 962 1427 1583 4538;4539;4540 4540 1694;2874 IKNENTEGSPQEDGVELEGLK 21 2 0 Phospho (STY) _IKNENTEGS(ph)PQEDGVELEGLK_ IKNENT(0.207)EGS(0.793)PQEDGVELEGLK IKNENT(-5.84)EGS(5.84)PQEDGVELEGLK 0 0 1 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 794.7068 3 789.363486 2365.06863 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.972 1 87.972 87.472 88.472 0 0 0 0 0.0012201 1 47935 41.257 33.419 2 2797 962 1427 1583 4541 4541 1694;2874 IKNENTEGSPQEDGVELEGLK 21 2 0 Phospho (STY) _IKNENTEGS(ph)PQEDGVELEGLK_ IKNENTEGS(1)PQEDGVELEGLK IKNENT(-49.94)EGS(49.94)PQEDGVELEGLK 0 0 1 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 789.3645 3 789.363486 2365.06863 67488.39 1.2543 0.00099013 -0.12789 -0.00010095 1.1265 0.00088918 789.697736820797 795.040347442669 78.329 1.8129 78.329 77.848 79.661 0 1375 169 14 0 0 0 1.4174E-76 2 50422 153.27 133.95 2 1.4758 1.082 0 448590000 179350000 269240000 2798 962 1427 1583 4542;4543 4542 1694;2874 IKNENTEGSPQEDGVELEGLK 21 2 0 Phospho (STY) _IKNENTEGS(ph)PQEDGVELEGLK_ IKNENTEGS(1)PQEDGVELEGLK IKNENT(-64.83)EGS(64.83)PQEDGVELEGLK 0 0 1 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1184.0432 2 1183.54159 2365.06863 54715.83 0.42301 0.00050066 -0.24339 -0.00028806 0.17962 0.00021259 1184.04296545674 1192.05655786365 82.645 2.9984 82.645 82.096 85.095 0 2717 271 12 0 0 0 0 3 52753 325.24 270.96 2 1.5081 1.0827 0 2152100000 851410000 1300700000 2799 962 1427 1583 4544;4545;4546 4544 1694;2874 IKNENTEGSPQEDGVELEGLK 21 2 0 2 Phospho (STY) _IKNENT(ph)EGS(ph)PQEDGVELEGLK_ IKNENT(1)EGS(1)PQEDGVELEGLK IKNENT(65.95)EGS(65.95)PQEDGVELEGLK 0 0 2 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 821.697 3 816.01893 2445.03496 66949.37 0.76914 0.00062763 -0.45461 -0.00037097 0.31453 0.00025666 816.352259778779 821.361542557017 91.721 0.83512 91.721 91.37 92.205 0 486 70 9 0 0 0 5.2481E-12 2 50981 65.954 57.459 1 0.75687 0.97328 0 115790000 65521000 50268000 2800 962 1427 1584 4547;4548 4548 1694;2874 IKPAATSHVEGSGGVSAK 18 2 0 Phospho (STY) _IKPAATSHVEGS(ph)GGVSAK_ IKPAATS(0.001)HVEGS(0.777)GGVS(0.222)AK IKPAAT(-36.32)S(-30.53)HVEGS(5.45)GGVS(-5.45)AK 0 0 1 1 B4DES6;B7Z9P6;G3XAG1;Q96ME7 B4DES6 B4DES6 ZNF512 Zinc finger protein 512 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 592.6283 3 592.627769 1774.86148 81811.77 0.43303 0.00025663 -0.10241 -6.069E-05 0.33062 0.00019594 592.962128887427 597.970648106799 66.254 0.50842 66.254 66.086 66.595 0 116 36 5 0 0 0 4.7077E-08 1 32135 74.579 74.579 4 0.30219 0.37066 0 33424000 23137000 10287000 2801 618 1428 1585 4549 4549 1020 IKPAATSHVEGSGGVSAK 18 2 0 Phospho (STY) _IKPAATSHVEGS(ph)GGVSAK_ IKPAATS(0.001)HVEGS(0.896)GGVS(0.103)AK IKPAAT(-40.46)S(-31.15)HVEGS(9.38)GGVS(-9.38)AK 0 0 1 1 B4DES6;B7Z9P6;G3XAG1;Q96ME7 B4DES6 B4DES6 ZNF512 Zinc finger protein 512 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 592.6284 3 592.627769 1774.86148 78152.15 0.51726 0.00030654 0.085007 5.0377E-05 0.60227 0.00035692 592.628195266321 597.970573462998 21.723 0.94484 21.723 21.544 22.489 0 312 47 12 0 0 0 1.3264E-06 1 8383 65.365 65.365 4 0.58631 0.43061 0 395000000 244930000 150070000 2802 618 1428 1585 4550 4550 1020 IKPAATSHVEGSGGVSAK 18 2 0 Phospho (STY) _IKPAATSHVEGS(ph)GGVSAK_ IKPAATS(0.002)HVEGS(0.971)GGVS(0.027)AK IKPAAT(-45.56)S(-27.42)HVEGS(15.48)GGVS(-15.48)AK 0 0 1 1 B4DES6;B7Z9P6;G3XAG1;Q96ME7 B4DES6 B4DES6 ZNF512 Zinc finger protein 512 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 888.9403 2 888.438015 1774.86148 63493.7 0.62228 0.00055285 0.059912 5.3228E-05 0.68219 0.00060608 888.438256996541 896.452297609292 21.743 0.46486 21.743 21.566 22.031 0 134 22 9 0 0 0 4.0465E-08 1 8389 78.917 69.728 4 0.54917 0.4187 0 49273000 32099000 17175000 2803 618 1428 1585 4551 4551 1020 IKPNLSSSPR 10 1 1 Phospho (STY) _IKPNLSS(ph)SPR_ IKPNLS(0.016)S(0.492)S(0.492)PR IKPNLS(-14.82)S(0)S(0)PR 0 0 1 1 A0A1B0GUH9;A0PJI9;A0A1P0AZG4 A0A1B0GUH9 A0A1B0GUH9 C10orf12 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 589.8011 2 589.800095 1177.58564 79476.64 0.71393 0.00042107 0.17832 0.00010517 0.89225 0.00052625 589.80030747283 598.811164316836 61.383 0.68297 61.383 61.064 61.747 -3.8147E-06 238 50 7 0 0 0 1.3826E-05 1 28199 96.745 71.271 3 1.3594 1.6218 0 93628000 42185000 51443000 2804 385 1429 1586 4552 4552 653;654;655 IKPNLSSSPR 10 1 1 Phospho (STY) _IKPNLS(ph)SSPR_ IKPNLS(0.418)S(0.291)S(0.291)PR IKPNLS(1.58)S(-1.58)S(-1.58)PR 0 0 1 1 A0A1B0GUH9;A0PJI9;A0A1P0AZG4 A0A1B0GUH9 A0A1B0GUH9 C10orf12 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 598.8118 2 589.800095 1177.58564 78218.07 0.85883 0.00050654 -0.19481 -0.0001149 0.66403 0.00039164 589.800059481286 598.81116272672 27.073 0.89304 27.073 26.845 27.738 0 320 56 9 0 0 0 0.012557 1 13060 45.879 28.937 3 3.0018 2.3195 0 179200000 46939000 132260000 2805 385 1429 1586 4553 4553 653;654;655 IKPNLSSSPR 10 1 1 2 Phospho (STY) _IKPNLSS(ph)S(ph)PR_ IKPNLS(0.556)S(0.747)S(0.697)PR IKPNLS(-1.65)S(2.44)S(1.65)PR 0 0 2 1 A0A1B0GUH9;A0PJI9;A0A1P0AZG4 A0A1B0GUH9 A0A1B0GUH9 C10orf12 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 638.7947 2 629.78326 1257.55197 77868.19 1.061 0.00066823 -0.58679 -0.00036955 0.47426 0.00029868 629.783049277978 638.794040217686 35.467 0.67736 35.467 35.128 35.805 0 148 54 4 0 0 0 0.010465 1 19831 43.68 38.521 3 3.4226 2.7094 0 10626000 3243000 7383200 2806 385 1429 1587 4554 4554 653;654;655 IKSPESVPVDSNK 13 2 0 Phospho (STY) _IKS(ph)PESVPVDSNK_ IKS(1)PESVPVDSNK IKS(39.41)PES(-39.41)VPVDS(-79.26)NK 0 0 1 1 H0UIC2;A0A075B754;Q96QE3 H0UIC2 H0UIC2 ATAD5 ATPase family AAA domain-containing protein 5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 748.3734 2 740.358171 1478.70179 71820.04 0.69588 0.0005152 -0.021931 -1.6237E-05 0.67395 0.00049897 740.358164220301 748.372329412221 58.091 1.012 58.091 57.512 58.524 -3.8147E-06 444 81 8 0 0 0 1.2983E-06 1 25764 95.981 79.362 3 1.5938 2.0497 0 116060000 44174000 71887000 2807 241 1430 1588 4555 4555 372 IKSPESVPVDSNK 13 2 0 Phospho (STY) _IKS(ph)PESVPVDSNK_ IKS(0.964)PES(0.035)VPVDSNK IKS(14.38)PES(-14.38)VPVDS(-34.35)NK 0 0 1 1 H0UIC2;A0A075B754;Q96QE3 H0UIC2 H0UIC2 ATAD5 ATPase family AAA domain-containing protein 5 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 740.3603 2 740.358171 1478.70179 70482.22 1.0723 0.00079388 0.1931 0.00014296 1.2654 0.00093684 740.358519249185 748.372492171179 32.251 1.4468 32.251 31.898 33.345 0 538 114 10 0 0 0 0.0032546 2 17209 63.682 42.431 3 4.2076 3.102 0 297150000 56623000 240530000 2808 241 1430 1588 4556;4557 4556 372 IKTPPKRPGGR 11 2 2 Phospho (STY) _IKT(ph)PPKRPGGR_ IKT(1)PPKRPGGR IKT(40.77)PPKRPGGR 0 0 1 3 Q75MP9;F2YMM1;Q75MQ0;S4S3R8;A0A090N8E9;Q15910;B7Z8K5 Q75MP9 Q75MP9 EZH2 Histone-lysine N-methyltransferase EZH2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 322.4326 4 322.432778 1285.702 104010.3 -0.41014 -0.00013224 0.1661 5.3556E-05 -0.24403 -7.8685E-05 322.432753457448 331.444094764202 65.719 0.46341 65.719 65.492 65.956 0 180 35 7 0 0 0 0.018509 1 31622 40.767 40.767 1 0.92789 0.93883 0 92211000 49370000 42841000 2809 278 1431 1589 4558 4558 2677 IKTPPKRPGGR 11 2 2 Phospho (STY) _IKT(ph)PPKRPGGR_ IKT(1)PPKRPGGR IKT(60.2)PPKRPGGR 0 0 1 3 Q75MP9;F2YMM1;Q75MQ0;S4S3R8;A0A090N8E9;Q15910;B7Z8K5 Q75MP9 Q75MP9 EZH2 Histone-lysine N-methyltransferase EZH2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 441.2235 3 429.574611 1285.702 91188.53 -0.26803 -0.00011514 0.1 4.2958E-05 -0.16803 -7.2181E-05 429.574778318245 441.589620343056 14.897 0.29892 14.897 14.739 15.038 0 26 6 6 0 0 0 0.0016966 2 2603 60.196 60.196 1 1.9026 1.8719 0 56307000 20690000 35618000 2810 278 1431 1589 4559;4560 4559 2677 ILATDVSSKNTPDSK 15 2 0 2 Phospho (STY) _ILATDVSSKNT(ph)PDS(ph)K_ ILAT(0.002)DVS(0.039)S(0.173)KNT(0.788)PDS(0.998)K ILAT(-27.02)DVS(-13.03)S(-6.61)KNT(6.61)PDS(27.78)K 0 0 2 1 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 876.3953 2 868.38119 1734.74783 68365.61 0.5271 0.00045772 0.14535 0.00012622 0.67245 0.00058395 868.380965355096 876.395426541529 53.791 0.80756 53.791 53.345 54.153 0 218 65 5 0 0 0 0.00020286 2 22555 68.576 55.223 10 0.31579 0.34258 0 12282000 8645200 3636500 2811 1035 1432 1590 4561;4562 4562 1914;2913 ILDPEGLALGAVIASSK 17 1 0 Phospho (STY) _ILDPEGLALGAVIAS(ph)SK_ ILDPEGLALGAVIAS(0.779)S(0.221)K ILDPEGLALGAVIAS(5.47)S(-5.47)K 0 0 1 0 B4DKU3;Q8IY81 B4DKU3 B4DKU3 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 871.4654 2 867.457885 1732.90122 65803.41 0.79341 0.00068825 -0.38626 -0.00033506 0.40715 0.00035319 867.457595293999 871.464804426991 130.56 0.90475 130.56 130.21 131.12 0 419 84 8 0 0 0 2.5629E-16 2 79301 104.81 104.81 2 1.3835 1.742 0 51072000 23699000 27373000 2812 632 1433 1591 4563;4564 4564 1044;1045 ILDPEGLALGAVIASSK 17 1 0 Phospho (STY) _ILDPEGLALGAVIASS(ph)K_ ILDPEGLALGAVIAS(0.397)S(0.603)K ILDPEGLALGAVIAS(-1.81)S(1.81)K 0 0 1 0 B4DKU3;Q8IY81 B4DKU3 B4DKU3 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-SECPEP 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 871.4218 2 867.457885 1732.90122 65809.04 0.99078 0.00085946 -0.54665 -0.00047419 0.44413 0.00038526 867.457453746615 871.464056241174 134.79 0.17838 134.79 134.68 134.86 0 17 4 6 0 0 0 1.812E-28 1 87041 111.66 111.66 2 1.9293 1.3097 0 25659000 8473500 17185000 2813 632 1433 1591 4565 4565 1044;1045 ILESITVSSLMATPQDPK 18 1 0 Oxidation (M),Phospho (STY) _ILESITVS(ph)SLM(ox)ATPQDPK_ ILESITVSSLM(1)ATPQDPK ILES(0.001)IT(0.049)VS(0.346)S(0.346)LMAT(0.257)PQDPK ILESITVSSLM(45.92)ATPQDPK ILES(-24.07)IT(-8.49)VS(0)S(0)LMAT(-1.3)PQDPK 0 1 1 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1013.4951 2 1013.49434 2024.97412 64844 0.20761 0.00021041 -0.044996 -4.5603E-05 0.16262 0.00016481 1013.99574089881 1017.50153822005 110.27 0.59418 110.27 109.95 110.54 7.6294E-06 224 52 6 0 0 0 0.00014062 1 65034 45.915 36.593 5 0.66679 0.84587 0 37304000 20754000 16550000 2814 1212 1434 1592 4566 4566 342 2427;2428 ILIPSDIESSK 11 1 0 Phospho (STY) _ILIPS(ph)DIESSK_ ILIPS(0.986)DIES(0.005)S(0.009)K ILIPS(20.52)DIES(-22.64)S(-20.52)K 0 0 1 0 Q6M1B8;A0A087WYW3;A0A024R2N6;P30414;Q6N014 Q6M1B8 Q6M1B8 DKFZp686J06106;NKTR;DKFZp686N24126 NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 645.3285 2 641.320526 1280.6265 77792.16 1.0619 0.000681 -0.052994 -3.3986E-05 1.0089 0.00064701 641.320399149189 645.327551708449 106.19 0.82774 106.19 105.79 106.62 0 214 54 6 0 0 0 0.0051109 2 61560 67.252 48.97 3 0.91402 1.1548 0 31145000 18672000 12473000 2815 67 1435 1593 4567;4568 4567 89 ILIPSDIESSK 11 1 0 Phospho (STY) _ILIPS(ph)DIESSK_ ILIPS(0.557)DIES(0.222)S(0.222)K ILIPS(4)DIES(-4)S(-4)K 0 0 1 0 Q6M1B8;A0A087WYW3;A0A024R2N6;P30414;Q6N014 Q6M1B8 Q6M1B8 DKFZp686J06106;NKTR;DKFZp686N24126 NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 645.3276 2 641.320526 1280.6265 77063.38 1.2573 0.00080632 -0.35997 -0.00023086 0.89731 0.00057546 641.320176904338 645.327322434378 112.03 0.77599 112.03 111.69 112.47 7.6294E-06 308 77 5 0 0 0 0.004476 1 72196 68.44 48.111 3 1.1067 0.86369 0 13871000 6625500 7245800 2816 67 1435 1593 4569 4569 89 ILKSPEIQR 9 1 1 Phospho (STY) _ILKS(ph)PEIQR_ ILKS(1)PEIQR ILKS(117.14)PEIQR 0 0 1 1 H3BM89;Q59GY2;P36578;B4DMJ2;B4DMJ6;Q53G74 H3BM89 H3BM89 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 582.3133 2 582.312838 1162.61112 81131.8 0.70826 0.00041243 -0.041527 -2.4182E-05 0.66674 0.00038825 582.31250541317 591.324056409779 63.879 0.50341 63.879 63.653 64.156 0 132 36 6 0 0 0 2.2302E-05 1 30223 117.14 89.654 1 1.3431 1.5709 0 35517000 14812000 20706000 2817 866 1436 1594 4570 4570 1476 ILKSPEIQR 9 1 1 Phospho (STY) _ILKS(ph)PEIQR_ ILKS(1)PEIQR ILKS(78.14)PEIQR 0 0 1 1 H3BM89;Q59GY2;P36578;B4DMJ2;B4DMJ6;Q53G74 H3BM89 H3BM89 RPL4 60S ribosomal protein L4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 582.3138 2 582.312838 1162.61112 79048.02 0.70876 0.00041272 0.11474 6.6812E-05 0.82349 0.00047953 582.313100771832 591.32405894252 37.787 2.9325 37.787 37.151 40.084 0 1562 260 10 0 0 0 0.00058233 6 21801 78.136 44.176 1 1.0844 0.83934 0 465470000 222810000 242660000 2818 866 1436 1594 4571;4572;4573;4574;4575;4576 4574 1476 ILLEDQSK 8 1 0 Phospho (STY) _ILLEDQS(ph)K_ ILLEDQS(1)K ILLEDQS(66.06)K 0 0 1 0 Q9ULI0;B3KWS5;H7BYF1 Q9ULI0 Q9ULI0 ATAD2B ATPase family AAA domain-containing protein 2B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 517.2563 2 513.249373 1024.48419 87334.2 0.88045 0.00045189 -0.58128 -0.00029834 0.29917 0.00015355 513.248915439072 517.25610582897 58.363 0.60894 58.363 58.112 58.721 0 133 55 4 0 0 0 0.0090527 1 35952 66.056 35.492 1 1.227 1.0102 0 5809300 3254300 2555100 2819 1237 1437 1595 4577 4577 2533 ILMEHIHK 8 1 0 Oxidation (M) _ILM(ox)EHIHK_ ILM(1)EHIHK ILM(104.37)EHIHK 0 1 0 0 Q8IWR8;J3QR09;J3KTE4;Q53G49;P84098 Q8IWR8 Q8IWR8 RPL19 Ribosomal protein L19;60S ribosomal protein L19 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 522.7909 2 518.784044 1035.55354 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.624 1 91.624 91.124 92.124 0 0 0 0 2.342E-06 1 50662 104.37 55.61 1 2820 894 1438 1596 4578 4578 247 ILMEHIHK 8 1 0 Oxidation (M) _ILM(ox)EHIHK_ ILM(1)EHIHK ILM(56.01)EHIHK 0 1 0 0 Q8IWR8;J3QR09;J3KTE4;Q53G49;P84098 Q8IWR8 Q8IWR8 RPL19 Ribosomal protein L19;60S ribosomal protein L19 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 522.791 2 518.784044 1035.55354 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.437 1 92.437 91.937 92.937 -7.6294E-06 0 0 0 0.014085 1 51279 56.014 10.296 1 2821 894 1438 1596 4579 4579 247 ILSPDSFIK 9 1 0 Phospho (STY) _ILS(ph)PDSFIK_ ILS(1)PDSFIK ILS(35.54)PDS(-35.54)FIK 0 0 1 0 B3KWI2;Q8IZT6 B3KWI2 B3KWI2 ASPM Abnormal spindle-like microcephaly-associated protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 550.2753 2 550.27539 1098.53623 82773.16 0.58151 0.00031999 0.12075 6.6443E-05 0.70226 0.00038644 550.275424804918 554.282383389128 120.58 1.0351 120.58 120.01 121.04 0 363 88 6 0 0 0 8.2138E-05 2 72876 91.549 45.548 2 1.1261 1.4208 0 30465000 14480000 15985000 2822 606 1439 1597 4580;4581 4581 998 ILSPDSFIK 9 1 0 Phospho (STY) _ILS(ph)PDSFIK_ ILS(0.997)PDS(0.003)FIK ILS(24.81)PDS(-24.81)FIK 0 0 1 0 B3KWI2;Q8IZT6 B3KWI2 B3KWI2 ASPM Abnormal spindle-like microcephaly-associated protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 550.2759 2 550.27539 1098.53623 82126.89 0.79235 0.00043601 -0.28936 -0.00015923 0.50299 0.00027678 550.275210045721 554.282220534988 128.34 1.1577 128.34 127.92 129.08 0 462 101 6 0 0 0 0.0021199 3 82736 71.221 33.665 2 1.9806 1.4592 0 19672000 6154700 13517000 2823 606 1439 1597 4582;4583;4584 4583 998 ILTFDQLALDSPK 13 1 0 Phospho (STY) _ILTFDQLALDS(ph)PK_ ILTFDQLALDS(1)PK ILT(-136.44)FDQLALDS(136.44)PK 0 0 1 0 F8VUA6;Q0QEW2;G3V203;H0YHA7;A0A024QZD1;J3QQ67;Q07020 F8VUA6 F8VUA6 RPL18 60S ribosomal protein L18 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 774.8943 2 770.886564 1539.75858 69011.95 0.85921 0.00066236 0.18723 0.00014433 1.0464 0.00080669 770.886678822048 774.893764544777 124.1 1.1634 124.1 123.67 124.83 0 653 102 10 0 0 0 6.0551E-66 3 75438 176.32 139.8 2 2.105 2.6075 0 152370000 48605000 103770000 2824 13 1440 1598 4585;4586;4587 4586 15 ILTFDQLALDSPK 13 1 0 Phospho (STY) _ILTFDQLALDS(ph)PK_ ILTFDQLALDS(1)PK ILT(-43.14)FDQLALDS(43.14)PK 0 0 1 0 F8VUA6;Q0QEW2;G3V203;H0YHA7;A0A024QZD1;J3QQ67;Q07020 F8VUA6 F8VUA6 RPL18 60S ribosomal protein L18 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 770.8882 2 770.886564 1539.75858 69623.62 1.1292 0.00087048 -0.082665 -6.3725E-05 1.0465 0.00080676 770.886469485875 774.893532842381 132.89 1.4208 132.89 132.56 133.99 0 793 134 10 0 0 0 0.0020791 2 85593 69.261 43.602 2 1.5271 1.02 0 118370000 44696000 73675000 2825 13 1440 1598 4588;4589 4589 15 ILVEDELSSPVVVFR 15 0 1 Phospho (STY) _ILVEDELSS(ph)PVVVFR_ ILVEDELS(0.141)S(0.859)PVVVFR ILVEDELS(-7.86)S(7.86)PVVVFR 0 0 1 0 Q6XYB5;Q86XE2;B4DHL7;H3BND4;Q6P474;Q6P996 Q6XYB5 Q6XYB5 PDXDC1;PDXDC2P Putative pyridoxal-dependent decarboxylase domain-containing protein 2;Pyridoxal-dependent decarboxylase domain-containing protein 1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 896.4631 2 891.457885 1780.90122 NaN NaN NaN 0.0002713 2.4185E-07 NaN NaN NaN NaN 129.06 0.26874 129.06 128.99 129.26 0 0 0 0 4.8403E-05 1 78473 78.486 65.133 2 NaN NaN 0 2795500 0 2795500 2826 623 1441 1599 4590 4590 1029 ILVPKSPVK 9 2 0 Phospho (STY) _ILVPKS(ph)PVK_ ILVPKS(1)PVK ILVPKS(66.66)PVK 0 0 1 1 Q9Y232 Q9Y232 Q9Y232 CDYL Chromodomain Y-like protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 538.8265 2 530.811943 1059.60933 83924.58 1.0355 0.00054963 -0.48009 -0.00025484 0.55537 0.00029479 530.81171197077 538.825924030094 57.105 0.9057 57.105 56.798 57.703 0 230 79 5 0 0 0 0.0036488 1 35040 66.664 56.677 1 1.0075 0.82774 0 14570000 6218000 8351900 2827 1245 1442 1600 4591 4591 2552 IMIMTDQDQDGSHIK 15 1 0 2 Oxidation (M) _IM(ox)IM(ox)TDQDQDGSHIK_ IM(1)IM(1)TDQDQDGSHIK IM(102.52)IM(102.52)TDQDQDGSHIK 0 2 0 0 P11388;Q71UH4;Q02880;B4DKD0;E9PCY5 P11388;Q71UH4 P11388 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 591.2753 3 588.602805 1762.78658 79655.68 0.35149 0.00020689 -0.027568 -1.6226E-05 0.32392 0.00019066 588.602385799668 591.27445965481 68.774 1.1547 68.774 68.164 69.319 7.6294E-06 284 110 4 0 0 0 2.6651E-12 2 34378 102.52 92.448 1 1.8159 2.3036 0 37228000 16165000 21063000 2828 962;1032 1443 1601 4592;4593 4593 267;268 IMNTFSVVPSPK 12 1 0 Oxidation (M),Phospho (STY) _IM(ox)NTFSVVPS(ph)PK_ IM(1)NTFSVVPSPK IMNTFS(0.008)VVPS(0.991)PK IM(62.89)NTFSVVPSPK IMNT(-34.69)FS(-20.8)VVPS(20.8)PK 0 1 1 0 B7ZAF0;Q5JP53;Q6LC01;Q5SU16;P07437;Q5ST81;B7ZAK1;B4DY90;Q9BUU9;B4E052;B4DQN9;Q8N6N5;Q8IZ29;Q8IWP6;P68371;Q1KSF8;B3KML9;G3V2A3;Q3ZCR3;Q9BV28;Q53G92;B2RBD5;A0A0B4J269;Q13509;M0R042;M0R2D3;M0QYM7;B4DE77;P04350 B7ZAF0 B7ZAF0 TUBB;TUBB2C;TUBB4B;XTP3TPATP1;TUBB3;TUBB4A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-3 chain;Tubulin beta-4A chain MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 712.343 2 708.335653 1414.65675 75443.07 0.89784 0.00063597 -0.69331 -0.0004911 0.20453 0.00014487 708.335425910538 712.342466343199 99.099 0.83587 99.099 98.75 99.585 0 249 71 6 0 0 0 0.0058218 1 56245 62.891 49.212 3 1.0944 1.3169 0 16000000 7637400 8362300 2829 718 1444 1602 4594 4594 185 1189 INSSGESGDESDEFLQSR 18 0 1 Phospho (STY) _INSSGESGDES(ph)DEFLQSR_ INS(0.002)S(0.002)GES(0.016)GDES(0.979)DEFLQS(0.001)R INS(-26.07)S(-27.17)GES(-17.85)GDES(17.85)DEFLQS(-30.61)R 0 0 1 0 A0JLR8;Q05CQ1;Q8N5A0;A0A087WUT6;O60841 A0JLR8 A0JLR8 EIF5B Eukaryotic translation initiation factor 5B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1023.9116 2 1018.90767 2035.80079 61349.23 0.25687 0.00026172 -0.56512 -0.0005758 -0.30825 -0.00031408 1018.90657674502 1023.91086294651 72.473 0.4666 72.473 72.19 72.657 0 85 35 4 0 0 0 6.1262E-06 2 36548 58.693 46.333 5 0.80707 0.96734 0 17398000 10118000 7280200 2830 248 1445 1603 4595;4596 4596 391 IPCDSPQSDPVDTPTSTK 18 1 0 Phospho (STY) _IPCDS(ph)PQSDPVDTPTSTK_ IPCDS(1)PQSDPVDTPTSTK IPCDS(42.03)PQS(-42.03)DPVDT(-119.43)PT(-148.23)S(-154.08)T(-159.74)K 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1012.9308 2 1012.92956 2023.84457 60129.07 0.18319 0.00018556 0.16197 0.00016406 0.34516 0.00034963 1012.92998284147 1016.93704238292 64.932 1.5396 64.932 64.125 65.664 0 920 112 12 0 0 0 8.8261E-117 4 31305 195.77 183.91 6 1.586 1.9587 0 601790000 240560000 361230000 2831 994 1446 1604 4597;4598;4599;4600 4599 1781;1782 IPCDSPQSDPVDTPTSTK 18 1 0 Phospho (STY) _IPCDS(ph)PQSDPVDTPTSTK_ IPCDS(1)PQSDPVDTPTSTK IPCDS(48.62)PQS(-48.62)DPVDT(-131.14)PT(-166.86)S(-173.52)T(-181.52)K 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1016.938 2 1012.92956 2023.84457 59842.72 0.36099 0.00036565 0.053693 5.4388E-05 0.41468 0.00042004 1012.93060144253 1016.93720019048 64.89 3.9956 64.89 64.156 68.151 0 2298 360 14 0 0 0 7.4691E-276 5 40891 264.92 247.92 6 3.712 2.4701 0 2436800000 499440000 1937400000 2832 994 1446 1604 4601;4602;4603;4604;4605 4604 1781;1782 IPCDSPQSDPVDTPTSTK 18 1 0 2 Phospho (STY) _IPCDS(ph)PQS(ph)DPVDTPTSTK_ IPCDS(1)PQS(1)DPVDTPTSTK IPCDS(105.65)PQS(61.29)DPVDT(-61.29)PT(-96.79)S(-105.15)T(-113.04)K 0 0 2 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1056.9208 2 1052.91273 2103.8109 59892.33 0.29724 0.00031297 -0.027039 -2.8469E-05 0.2702 0.0002845 1052.9130213476 1056.92014887521 68.149 1.2506 68.149 67.559 68.81 0 742 111 10 0 0 0 2.0659E-117 2 33898 201.61 186.06 15 1.5718 1.946 0 192110000 75389000 116720000 2833 994 1446 1605 4606;4607 4607 1781;1782 IPCDSPQSDPVDTPTSTK 18 1 0 2 Phospho (STY) _IPCDS(ph)PQS(ph)DPVDTPTSTK_ IPCDS(0.999)PQS(0.998)DPVDT(0.002)PT(0.001)STK IPCDS(33.12)PQS(30.73)DPVDT(-30.73)PT(-36.11)S(-39.22)T(-39.65)K 0 0 2 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1052.9126 2 1052.91273 2103.8109 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.613 1 67.613 67.113 68.113 0 0 0 0 0.0025557 1 33294 47.754 35.589 15 2834 994 1446 1605 4608 4608 1781;1782 IPCDSPQSDPVDTPTSTK 18 1 0 2 Phospho (STY) _IPCDS(ph)PQS(ph)DPVDTPTSTK_ IPCDS(0.998)PQS(0.998)DPVDT(0.002)PT(0.001)S(0.001)T(0.001)K IPCDS(32.9)PQS(30.47)DPVDT(-30.47)PT(-34.77)S(-35.79)T(-35.66)K 0 0 2 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1056.921 2 1052.91273 2103.8109 58400.66 0.71822 0.00075622 -0.094886 -9.9906E-05 0.62333 0.00065632 1052.91318849528 1056.92007297515 74.712 2.0852 74.712 73.921 76.007 0 1351 182 13 0 0 0 0.00029403 1 47637 42.64 38.114 15 4.0455 2.6968 0 809840000 175530000 634310000 2835 994 1446 1605 4609 4609 1781;1782 IPCESPPLEVVDTTASTK 18 1 0 Phospho (STY) _IPCES(ph)PPLEVVDTTASTK_ IPCES(1)PPLEVVDTTASTK IPCES(102.48)PPLEVVDT(-102.48)T(-109.03)AS(-121.82)T(-129.45)K 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1016.9776 2 1012.46832 2022.92209 59734.39 0.50783 0.00051416 0.058023 5.8746E-05 0.56585 0.00057291 1012.4687130037 1016.47562652277 105.62 1.655 105.62 104.66 106.32 0 838 112 12 0 0 0 8.3675E-88 3 61473 182.31 182.31 5 2.0993 2.5933 0 527220000 170030000 357190000 2836 994 1447 1606 4610;4611;4612 4611 1783 IPCESPPLEVVDTTASTK 18 1 0 Phospho (STY) _IPCES(ph)PPLEVVDTTASTK_ IPCES(1)PPLEVVDTTASTK IPCES(63.29)PPLEVVDT(-63.29)T(-67.11)AS(-68.95)T(-68.52)K 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 677.9868 3 675.314639 2022.92209 73699.36 0.76918 0.00051944 -0.076792 -5.1858E-05 0.69239 0.00046758 675.649094011875 677.985995770915 94.306 1.3296 94.306 93.724 95.054 0 383 121 6 0 0 0 9.7075E-09 1 60662 80.752 80.752 5 4.7336 3.1069 0 31230000 8631900 22598000 2837 994 1447 1606 4613 4613 1783 IPCESPPLEVVDTTASTK 18 1 0 Phospho (STY) _IPCES(ph)PPLEVVDTTASTK_ IPCES(1)PPLEVVDTTASTK IPCES(95.8)PPLEVVDT(-95.8)T(-102.55)AS(-108.01)T(-108.01)K 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1016.4764 2 1012.46832 2022.92209 59497.27 0.47968 0.00048566 -0.26787 -0.00027121 0.2118 0.00021445 1012.46910204003 1016.47595072426 112.03 2.7285 112.03 111.37 114.1 7.6294E-06 2017 263 14 0 0 0 1.6204E-52 1 72214 152.01 152.01 5 4.1606 2.7677 0 2978200000 563510000 2414700000 2838 994 1447 1606 4614 4614 1783 IPCESPPLEVVDTTASTK 18 1 0 Phospho (STY) _IPCES(ph)PPLEVVDTTASTK_ IPCES(1)PPLEVVDTTASTK IPCES(62.05)PPLEVVDT(-62.05)T(-63.71)AS(-62.35)T(-62.35)K 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 677.9867 3 675.314639 2022.92209 NaN NaN NaN -0.37729 -0.00025479 NaN NaN NaN NaN 98.631 1.1103 98.631 98.06 99.171 7.6294E-06 0 0 0 2.8144E-07 1 63628 70.072 56.2 5 NaN NaN 0 5413100 0 5413100 2839 994 1447 1606 4615 4615 1783 IPCKSPPPELTDTATSTK 18 2 0 Phospho (STY) _IPCKS(ph)PPPELTDTATSTK_ IPCKS(0.997)PPPELT(0.002)DTATSTK IPCKS(27.3)PPPELT(-27.3)DT(-35.07)AT(-35.07)S(-34.84)T(-34.84)K 0 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 680.3303 3 674.986634 2021.93807 74303.09 0.56028 0.00037818 -0.17514 -0.00011822 0.38515 0.00025997 674.986576785379 680.663734616213 72.662 0.8201 72.662 72.252 73.073 0 341 67 7 0 0 0 9.5829E-05 1 36525 43.888 27.946 6 1.7003 2.1467 0 60276000 25903000 34373000 2840 994 1448 1607 4616 4616 1784 IPCKSPPPELTDTATSTK 18 2 0 Phospho (STY) _IPCKS(ph)PPPELTDTATSTK_ IPCKS(1)PPPELTDTATSTK IPCKS(47.49)PPPELT(-51.52)DT(-49.16)AT(-48.62)S(-48.06)T(-47.49)K 0 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 680.3304 3 674.986634 2021.93807 73587.4 0.85705 0.00057849 0.46278 0.00031237 1.3198 0.00089087 674.98713120644 680.329789378373 46.213 1.7624 46.213 45.676 47.438 3.8147E-06 554 164 6 0 0 0 1.0615E-06 1 27491 66.889 50.793 6 3.7928 3.1162 0 14572000 3411700 11161000 2841 994 1448 1607 4617 4617 1784 IPCKSPPPELTDTATSTK 18 2 0 Phospho (STY) _IPCKS(ph)PPPELTDTATSTK_ IPCKS(0.914)PPPELT(0.011)DT(0.004)AT(0.024)S(0.024)T(0.024)K IPCKS(15.87)PPPELT(-19.23)DT(-24.13)AT(-15.87)S(-15.87)T(-15.87)K 0 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 680.6652 3 674.986634 2021.93807 NaN NaN NaN 0.2519 0.00017003 NaN NaN NaN NaN 55.921 1.95 55.921 55.018 56.968 -3.8147E-06 0 0 0 2.3275E-05 1 34478 49.662 31.745 6 NaN NaN 0 17517000 0 17517000 2842 994 1448 1607 4618 4618 1784 IPNYQLSPTK 10 1 0 Phospho (STY) _IPNYQLS(ph)PTK_ IPNYQLS(0.671)PT(0.329)K IPNY(-31.58)QLS(3.09)PT(-3.09)K 0 0 1 0 V9PAJ5;A0PJ71;A0A0C4DG07;A6H8Y5;O60934 V9PAJ5 V9PAJ5 NBS1;NBN Nibrin ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 620.8027 2 620.802304 1239.59005 NaN NaN NaN 0.42487 0.00026376 NaN NaN NaN NaN 74.232 0.46061 74.232 73.875 74.336 0 0 0 0 0.0124 1 37918 57.434 30.131 3 NaN NaN 0 9344800 9344800 0 2843 316 1449 1608 4619 4619 498 IPNYQLSPTK 10 1 0 Phospho (STY) _IPNYQLS(ph)PTK_ IPNYQLS(0.635)PT(0.365)K IPNY(-47.67)QLS(2.4)PT(-2.4)K 0 0 1 0 V9PAJ5;A0PJ71;A0A0C4DG07;A6H8Y5;O60934 V9PAJ5 V9PAJ5 NBS1;NBN Nibrin MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 620.804 2 620.802304 1239.59005 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.294 1 74.294 73.794 74.794 0 0 0 0 0.00017086 1 38025 87.216 58.985 3 2844 316 1449 1608 4620 4620 498 IPNYQLSPTK 10 1 0 Phospho (STY) _IPNYQLS(ph)PTK_ IPNY(0.001)QLS(0.725)PT(0.274)K IPNY(-29.93)QLS(4.22)PT(-4.22)K 0 0 1 0 V9PAJ5;A0PJ71;A0A0C4DG07;A6H8Y5;O60934 V9PAJ5 V9PAJ5 NBS1;NBN Nibrin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 620.8036 2 620.802304 1239.59005 79118.68 0.91396 0.00056739 -0.0436 -2.7067E-05 0.87036 0.00054032 620.802198235502 624.80938211519 73.976 0.97386 73.976 73.505 74.479 0 297 80 6 0 0 0 0.015515 1 46846 46.643 30.111 3 0.59805 0.46139 0 12420000 8291600 4128500 2845 316 1449 1608 4621 4621 498 IPPIIEESSSPPYR 14 0 1 Phospho (STY) _IPPIIEES(ph)SSPPYR_ IPPIIEES(0.324)S(0.324)S(0.324)PPY(0.028)R IPPIIEES(0)S(0)S(0)PPY(-10.6)R 0 0 1 0 C9IZX4;Q6P9H4 C9IZX4 C9IZX4 CNKSR3 Connector enhancer of kinase suppressor of ras 3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 837.9072 2 832.900203 1663.78585 NaN NaN NaN NaN NaN NaN NaN NaN NaN 106.59 1 106.59 106.09 107.09 0 0 0 0 0.0018945 1 62070 45.137 9.9127 4 2846 735 1450 1609 4622 4622 1238;1239;1240 IPYPGRSPQDLASTSR 16 0 2 Phospho (STY) _IPYPGRS(ph)PQDLASTSR_ IPY(0.435)PGRS(0.565)PQDLASTSR IPY(-1.13)PGRS(1.13)PQDLAS(-36.32)T(-40.03)S(-39.15)R 0 0 1 1 Q9HC52;C9JM54;C9J6K3 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 615.6328 3 608.959519 1823.85673 75775.39 0.65648 0.00039977 -0.22526 -0.00013718 0.43121 0.00026259 608.959043058233 615.63171135781 79.896 1.6727 79.896 78.937 80.61 0 724 152 7 0 0 0 7.6027E-07 2 42151 76.704 55.306 5 0.85716 1.0675 0 112250000 65925000 46324000 2847 1210 1451 1610 4623;4624 4624 2412 IPYPGRSPQDLASTSR 16 0 2 Phospho (STY) _IPYPGRS(ph)PQDLASTSR_ IPY(0.077)PGRS(0.907)PQDLAS(0.006)T(0.006)S(0.006)R IPY(-10.72)PGRS(10.72)PQDLAS(-22.16)T(-22.16)S(-22.16)R 0 0 1 1 Q9HC52;C9JM54;C9J6K3 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 615.9667 3 608.959519 1823.85673 76846.19 0.92407 0.00056272 0.014625 8.9057E-06 0.9387 0.00057163 608.959634503193 615.631640671302 74.271 1.6081 74.271 73.782 75.39 0 988 140 10 0 0 0 9.3513E-05 1 46936 49.865 32.786 5 1.1744 1.0246 0 173060000 77679000 95384000 2848 1210 1451 1610 4625 4625 2412 IQAQFGPLAQLSPQER 16 0 1 Phospho (STY) _IQAQFGPLAQLS(ph)PQER_ IQAQFGPLAQLS(1)PQER IQAQFGPLAQLS(110.12)PQER 0 0 1 0 Q8WW55;Q59H39;P51692 Q8WW55 Q8WW55 STAT5B Signal transducer and activator of transcription;Signal transducer and activator of transcription 5B ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 936.9664 2 931.961658 1861.90876 NaN NaN NaN 0.26529 0.00024724 NaN NaN NaN NaN 114.06 0.61179 114.06 113.76 114.37 -7.6294E-06 0 0 0 7.2594E-22 2 67810 110.12 85.27 1 NaN NaN 0 16615000 0 16615000 2849 1005 1452 1611 4626;4627 4626 1834 IQDPTEDAEAEDTPR 15 0 1 Phospho (STY) _IQDPTEDAEAEDT(ph)PR_ IQDPT(0.003)EDAEAEDT(0.997)PR IQDPT(-24.79)EDAEAEDT(24.79)PR 0 0 1 0 O96028;Q05CW4;H0Y9L4 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 883.8602 2 883.859461 1765.70437 65819.17 0.49736 0.00043959 0.41855 0.00036994 0.91591 0.00080954 883.860181150678 888.864066562594 51.61 1.0153 51.61 51.098 52.114 0 469 81 8 0 0 0 0.0087917 1 20905 54.281 54.281 2 0.68273 0.84177 0 32323000 19175000 13148000 2850 953 1453 1612 4628 4628 2865 IQEHFNK 7 1 0 Unmodified _IQEHFNK_ 0 0 0 0 I3L0H8;Q2NL95;Q9HBZ9;Q7Z4W5;Q53G16;F6QDS0;A0A0U4B4U6;H3BQK0;Q9NUU7;Q9UMR2;Q59FQ9;Q68DY7;B4DL69;Q69YM2;A0A024QZ90;I3L352;B4DS24 I3L0H8 I3L0H8 DDX19A;DDX19B;DKFZp686C21137;hCG_1998531;DKFZp762C1313 ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 462.2457 2 458.237784 914.461016 NaN NaN NaN 0.90591 0.00041512 NaN NaN NaN NaN 65.708 0.19998 65.708 65.602 65.802 0 0 0 0 0.0070166 2 31735 69.093 17.637 1 NaN NaN 0 7085100 0 7085100 2851 370 1454 1613 4629;4630 4630 IQFKPDDGISPER 13 1 1 Phospho (STY) _IQFKPDDGIS(ph)PER_ IQFKPDDGIS(1)PER IQFKPDDGIS(40.94)PER 0 0 1 1 A0A024R8A7;Q96I24 A0A024R8A7 A0A024R8A7 hCG_31253;FUBP3 Far upstream element-binding protein 3 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 791.8713 2 791.36907 1580.72359 NaN NaN NaN -0.54416 -0.00043063 NaN NaN NaN NaN 76.347 0.65955 76.347 76.085 76.745 0 0 0 0 0.028889 1 48684 40.941 26.38 1 NaN NaN 0 5780400 5780400 0 2852 149 1455 1614 4631 4631 222 IQIISTDSAVASPQR 15 0 1 Phospho (STY) _IQIISTDSAVAS(ph)PQR_ IQIISTDS(0.139)AVAS(0.861)PQR IQIIS(-47.68)T(-36.39)DS(-7.93)AVAS(7.93)PQR 0 0 1 0 C9JKS0;F2YGU2;P49116;C9JMI6;Q6PHZ7;C9J2Y1 C9JKS0 C9JKS0 NR2C2 Nuclear receptor subfamily 2 group C member 2 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 833.8649 2 833.414009 1664.81347 70087.46 1.4184 0.0011821 0.14332 0.00011944 1.5617 0.0013015 833.915348670881 838.418568923679 91.443 0.87061 91.443 90.765 91.636 0 162 75 5 0 0 0 1.4311E-06 1 50522 83.894 83.894 4 0.40877 0.50269 0 23314000 16658000 6656800 2853 742 1456 1615 4632 4632 1249;1250 IQIISTDSAVASPQR 15 0 1 Phospho (STY) _IQIISTDS(ph)AVASPQR_ IQIIS(0.017)T(0.029)DS(0.555)AVAS(0.399)PQR IQIIS(-15.23)T(-12.82)DS(1.43)AVAS(-1.43)PQR 0 0 1 0 C9JKS0;F2YGU2;P49116;C9JMI6;Q6PHZ7;C9J2Y1 C9JKS0 C9JKS0 NR2C2 Nuclear receptor subfamily 2 group C member 2 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 838.4196 2 833.414009 1664.81347 NaN NaN NaN 0.31437 0.000262 NaN NaN NaN NaN 94.969 1.0018 94.969 94.336 95.338 -7.6294E-06 0 0 0 0.0001418 1 61049 61.641 28.437 4 NaN NaN 0 9616600 0 9616600 2854 742 1456 1615 4633 4633 1249;1250 IQIVTAVDASGSPK 14 1 0 Phospho (STY) _IQIVTAVDAS(ph)GSPK_ IQIVT(0.006)AVDAS(0.497)GS(0.497)PK IQIVT(-19.1)AVDAS(0)GS(0)PK 0 0 1 0 C9JKS0;F2YGU2;P49116;C9JMI6;Q6PHZ7 C9JKS0 C9JKS0 NR2C2 Nuclear receptor subfamily 2 group C member 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 737.3758 2 733.368539 1464.72252 73902.97 0.91684 0.00067238 0.13442 9.8576E-05 1.0513 0.00077096 733.368594823636 737.375603969849 96.075 1.2625 96.075 95.23 96.492 0 458 125 6 0 0 0 0.0025262 1 61881 62.861 37.202 3 0.96687 0.74921 0 15594000 7555400 8038700 2855 742 1457 1616 4634 4634 1251;1252 IRAEEEDLAAVPFLASDNEEEEDEK 25 1 1 Phospho (STY) _IRAEEEDLAAVPFLAS(ph)DNEEEEDEK_ IRAEEEDLAAVPFLAS(1)DNEEEEDEK IRAEEEDLAAVPFLAS(73.77)DNEEEEDEK 0 0 1 1 O95714;A8KAQ8;A0A0J9YVP0 O95714 O95714 HERC2 E3 ubiquitin-protein ligase HERC2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 983.1033 3 976.760522 2927.25974 61363.09 0.74878 0.00073138 -0.10944 -0.0001069 0.63934 0.00062448 977.093897293251 983.102696810361 124.68 1.5368 124.68 123.85 125.39 0 713 140 8 0 0 0 2.1047E-21 2 75471 73.771 66.411 1 0.98238 1.1504 0 36729000 16555000 20174000 2856 951 1458 1617 4635;4636 4635 1649 IREEYPDR 8 0 2 Unmodified _IREEYPDR_ 0 0 0 1 B7ZAF0;Q5JP53;Q6LC01;Q5SU16;P07437;Q5ST81;B7ZAK1;B4DY90;Q9BUU9;B4E052;B4DQN9;Q8N6N5;Q8IZ29;Q8IWP6;P68371;Q1KSF8;O43209;A0A024QZU2;B3KML9;B2R6L0;Q9BVA1;Q13885;A1L195;A5D907;A5D906;Q9UGA2;B7Z4N1;Q2NKY5;A1L196;A0A075B736;Q5SQY0;A0A183YE00;CON__ENSEMBL:ENSBTAP00000025008;Q3ZCM7;A6NNZ2;Q9H4B7 B7ZAF0 B7ZAF0 TUBB;TUBB2C;TUBB4B;XTP3TPATP1;TUBB2B;TUBB2A;DKFZp566F223;TUBB6;TUBB8;TUBB1 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-8 chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 359.8489 3 359.848967 1076.52507 97339.45 -0.2676 -9.6297E-05 0.35614 0.00012816 0.088535 3.1859E-05 359.849063465765 366.521241827629 68.105 1.4365 68.105 67.872 69.309 0 602 132 8 0 0 0 0.015921 2 33613 69.598 45.443 1 1.5336 1.924 0 659890000 255720000 404170000 2857 718 1459 1618 4637;4638 4638 IREEYPDR 8 0 2 Unmodified _IREEYPDR_ 0 0 0 1 B7ZAF0;Q5JP53;Q6LC01;Q5SU16;P07437;Q5ST81;B7ZAK1;B4DY90;Q9BUU9;B4E052;B4DQN9;Q8N6N5;Q8IZ29;Q8IWP6;P68371;Q1KSF8;O43209;A0A024QZU2;B3KML9;B2R6L0;Q9BVA1;Q13885;A1L195;A5D907;A5D906;Q9UGA2;B7Z4N1;Q2NKY5;A1L196;A0A075B736;Q5SQY0;A0A183YE00;CON__ENSEMBL:ENSBTAP00000025008;Q3ZCM7;A6NNZ2;Q9H4B7 B7ZAF0 B7ZAF0 TUBB;TUBB2C;TUBB4B;XTP3TPATP1;TUBB2B;TUBB2A;DKFZp566F223;TUBB6;TUBB8;TUBB1 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-8 chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 549.2778 2 539.269813 1076.52507 81705.35 0.35267 0.00019018 0.271 0.00014614 0.62367 0.00033632 539.269939626284 549.278144209834 68.081 1.3837 68.081 67.859 69.242 0 484 127 7 0 0 0 0.012324 3 34146 91.087 52.125 1 1.4565 1.821 0 282810000 110460000 172340000 2858 718 1459 1618 4639;4640;4641 4641 IREHLEK 7 1 1 Unmodified _IREHLEK_ 0 0 0 1 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__P05784 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 471.7777 2 462.766709 923.518865 87963.33 0.060349 2.7928E-05 -0.13877 -6.4216E-05 -0.078416 -3.6288E-05 462.766519898659 471.777824884197 84.772 1.8171 84.772 84.072 85.889 0 545 167 6 0 0 0 0.011083 1 46365 100.02 19.788 1 1.0686 1.2825 0 147870000 71780000 76090000 2859 186 1460 1619 4642 4642 IREHLEK 7 1 1 Unmodified _IREHLEK_ 0 0 0 1 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__P05784 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 462.7666 2 462.766709 923.518865 NaN NaN NaN -0.27356 -0.00012659 NaN NaN NaN NaN 85.645 1.1701 85.645 85.114 86.284 0 0 0 0 6.9489E-05 1 46351 86.833 0.74641 1 NaN NaN 0 61213000 61213000 0 2860 186 1460 1619 4643 4643 IREHLEK 7 1 1 Unmodified _IREHLEK_ 0 0 0 1 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__P05784 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 314.8543 3 308.846898 923.518865 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.737 1 85.737 85.237 86.237 0 0 0 0 0.022761 1 46335 40.103 7.6327 1 2861 186 1460 1619 4644 4644 IREHLEK 7 1 1 Unmodified _IREHLEK_ 0 0 0 1 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__P05784 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 314.8543 3 308.846898 923.518865 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.493 1 86.493 85.993 86.993 -7.6294E-06 0 0 0 0.01718 1 46875 47.849 7.7455 1 2862 186 1460 1619 4645 4645 IREHLEK 7 1 1 Unmodified _IREHLEK_ 0 0 0 1 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__P05784 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 314.8542 3 308.846898 923.518865 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.266 1 87.266 86.766 87.766 0 0 0 0 0.028362 1 47416 34.824 2.3537 1 2863 186 1460 1619 4646 4646 IREHLEK 7 1 1 Unmodified _IREHLEK_ 0 0 0 1 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__P05784 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 314.8543 3 308.846898 923.518865 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.836 1 87.836 87.336 88.336 -7.6294E-06 0 0 0 0.01813 1 47836 45.081 7.523 1 2864 186 1460 1619 4647 4647 IREHLEK 7 1 1 Unmodified _IREHLEK_ 0 0 0 1 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__P05784 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 314.854 3 308.846898 923.518865 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.812 1 88.812 88.312 89.312 0 0 0 0 0.025283 1 48541 37.558 7.3733 1 2865 186 1460 1619 4648 4648 IRELESQISELQEDLESER 19 0 2 Unmodified _IRELESQISELQEDLESER_ 0 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 769.3469 3 768.383559 2302.12885 70213.91 0.64666 0.00049688 0.28127 0.00021612 0.92793 0.000713 768.717743320518 775.055909818635 145.43 0.2336 145.43 145.27 145.5 0 35 5 9 0 0 0 2.5706E-17 2 83809 98.175 93.175 1 1.3808 1.7115 0 35398000 14577000 20821000 2866 49 1461 1620 4649;4650 4649 IRELESQISELQEDLESER 19 0 2 Unmodified _IRELESQISELQEDLESER_ 0 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 774.6749 3 768.383559 2302.12885 NaN NaN NaN -0.07199 -5.5316E-05 NaN NaN NaN NaN 133.51 0.11809 133.51 133.45 133.57 0 0 0 0 0.0025133 1 81292 44.788 29.196 1 NaN NaN 0 6509700 0 6509700 2867 49 1461 1620 4651 4651 IREQEPARR 9 0 3 Unmodified _IREQEPARR_ 0 0 0 2 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 385.5512 3 385.551144 1153.6316 NaN NaN NaN -0.077744 -2.9974E-05 NaN NaN NaN NaN 67.246 0.62573 67.246 67.06 67.686 0 0 0 0 0.014867 1 32984 45.368 32.578 1 NaN NaN 0 27117000 27117000 0 2868 994;1130 1462 1621 4652 4652 IRLENEIQTYR 11 0 2 Unmodified _IRLENEIQTYR_ 0 0 0 1 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 478.9279 3 478.928169 1433.76268 NaN NaN NaN -0.21503 -0.00010299 NaN NaN NaN NaN 105.44 1.456 105.44 104.79 106.24 0 0 0 0 0.0058425 1 61065 67.879 47.022 1 NaN NaN 0 64573000 64573000 0 + 2869 755 1463 1622 4653 4653 IRRDEEGNEIK 11 1 2 Unmodified _IRRDEEGNEIK_ 0 0 0 2 Q8WVC0;B4DNM0 Q8WVC0 Q8WVC0 LEO1 RNA polymerase-associated protein LEO1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 462.9159 3 453.572274 1357.69499 90506.49 0.27552 0.00012497 0.011556 5.2413E-06 0.28708 0.00013021 453.572276931946 462.91576054673 81.485 1.1738 81.485 80.785 81.959 0 399 106 6 0 0 0 0.014943 1 43158 31.431 31.431 1 1.4102 1.6228 0 43701000 16855000 26846000 2870 1166 1464 1623 4654 4654 IRTPSYSPTQR 11 0 2 3 Phospho (STY) _IRT(ph)PS(ph)YS(ph)PTQR_ IRT(1)PS(0.804)Y(0.203)S(0.982)PT(0.012)QR IRT(41.55)PS(6.1)Y(-6.1)S(19.26)PT(-19.26)QR 0 0 3 1 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 773.2996 2 773.298621 1544.58269 68734.09 0.8528 0.00065947 0.40889 0.00031619 1.2617 0.00097566 773.298743481048 783.307064874888 46.802 1.4776 46.802 46.092 47.57 0 618 103 8 0 0 0 3.3477E-07 3 17738 100.22 89.317 10 1.0317 1.2816 0 60063000 30411000 29652000 2871 1034 1465 1624 4655;4656;4657 4655 1881;1882;2909 IRTSPTFR 8 0 2 Phospho (STY) _IRTS(ph)PTFR_ IRT(0.093)S(0.906)PTFR IRT(-9.87)S(9.87)PT(-42.06)FR 0 0 1 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 529.2632 2 529.263149 1056.51174 81251.05 0.31789 0.00016825 -0.080168 -4.243E-05 0.23772 0.00012582 529.26312918938 539.271393740111 66.23 1.2045 66.23 65.943 67.147 0 473 88 9 0 0 0 0.0030905 2 31999 115.39 65.916 3 0.76426 0.96191 0 1419300000 801220000 618100000 2872 511 1466 1625 4658;4659 4659 876 IRTSPTFR 8 0 2 Phospho (STY) _IRTS(ph)PTFR_ IRT(0.131)S(0.866)PT(0.003)FR IRT(-8.21)S(8.21)PT(-25.08)FR 0 0 1 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 539.2719 2 529.263149 1056.51174 81421.47 0.94193 0.00049853 -0.68775 -0.000364 0.25418 0.00013453 529.263254495995 539.270902256291 33.967 3.649 33.967 33.597 37.246 0 1333 297 11 0 0 0 0.0026131 3 19041 103.69 61.355 3 0.63114 0.55694 0 1725900000 1028700000 697130000 2873 511 1466 1625 4660;4661;4662 4662 876 IRVDYSITK 9 1 1 Unmodified _IRVDYSITK_ 0 0 0 1 Q549U1;Q13595 Q549U1 Q549U1 HSU53209;TRA2A Transformer-2 protein homolog alpha ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 556.8251 2 547.813856 1093.61316 NaN NaN NaN -0.73639 -0.00040341 NaN NaN NaN NaN 98.533 0.69096 98.533 98.234 98.924 0 0 0 0 0.016866 1 56014 74.173 22.318 1 NaN NaN 0 7313200 0 7313200 2874 1052 1467 1626 4663 4663 IRYESLTDPSK 11 1 1 Unmodified _IRYESLTDPSK_ 0 0 0 1 A0A024RD80;P08238;B4DMA2;Q6PK50;Q58FF7;Q58FF6;G3V2J8;Q58FF8;O14942;B4DTA5;Q86SX1;Q2VPJ6;K9JA46;P07900 A0A024RD80;Q2VPJ6 A0A024RD80 HSP90AB1;HSP90AB3P;HSP90AB4P;HSP90AA1;HSP90AB2P;EL52 Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4;Putative heat shock protein HSP 90-beta 2;Heat shock protein HSP 90-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 436.8983 3 436.897987 1307.67213 89591.72 -0.13894 -6.0702E-05 0.049813 2.1763E-05 -0.089126 -3.8939E-05 436.898108039067 442.905388788231 91.79 1.0198 91.79 91.417 92.437 0 352 88 8 0 0 0 0.029852 1 50677 35.774 28.23 1 2.2658 2.7015 0 89051000 23943000 65107000 2875 223;906 1468 1627 4664 4664 IRYESLTDPSK 11 1 1 Unmodified _IRYESLTDPSK_ 0 0 0 1 A0A024RD80;P08238;B4DMA2;Q6PK50;Q58FF7;Q58FF6;G3V2J8;Q58FF8;O14942;B4DTA5;Q86SX1;Q2VPJ6;K9JA46;P07900 A0A024RD80;Q2VPJ6 A0A024RD80 HSP90AB1;HSP90AB3P;HSP90AB4P;HSP90AA1;HSP90AB2P;EL52 Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4;Putative heat shock protein HSP 90-beta 2;Heat shock protein HSP 90-alpha ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 663.8553 2 654.843342 1307.67213 NaN NaN NaN -0.29043 -0.00019019 NaN NaN NaN NaN 91.758 0.82603 91.758 91.453 92.279 0 0 0 0 0.015421 1 50651 74.944 36.858 1 NaN NaN 0 58489000 0 58489000 2876 223;906 1468 1627 4665 4665 ISELEFHTDK 10 1 0 Unmodified _ISELEFHTDK_ 0 0 0 0 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 409.5431 3 406.871549 1217.59282 93861.91 0.40312 0.00016402 0.45193 0.00018388 0.85506 0.0003479 406.871710271662 409.542950069146 91.53 0.81453 91.53 91.067 91.882 0 288 67 6 0 0 0 0.0099559 2 50353 40.727 35.669 1 0.86954 1.0792 0 108240000 59432000 48806000 2877 1167 1469 1628 4666;4667 4666 ISELEIINSSFENILQEK 18 1 0 Phospho (STY) _ISELEIINSS(ph)FENILQEK_ ISELEIINS(0.039)S(0.961)FENILQEK IS(-151.34)ELEIINS(-13.88)S(13.88)FENILQEK 0 0 1 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1093.5359 2 1093.53505 2185.05555 53821.76 0.84147 0.00092018 -0.67641 -0.00073968 0.16506 0.0001805 1094.53848865101 1098.04160696847 133.55 0.11185 133.55 133.49 133.6 0 19 3 8 0 0 0 9.232E-117 1 81377 195.38 173.33 3 1.0627 1.3463 0 42746000 20271000 22474000 2878 999 1470 1629 4668 4668 1810 ISGDLSSEEER 11 0 1 Phospho (STY) _ISGDLS(ph)SEEER_ IS(0.001)GDLS(0.798)S(0.201)EEER IS(-29.33)GDLS(5.98)S(-5.98)EEER 0 0 1 0 Q9NSI6;Q5R2U8;H0Y5I9;Q5R2U6;H0Y463;Q5R2U5;H0Y4A7;Q5R2U4;H0Y4R9;Q5R2U9;H0Y500 Q9NSI6 Q9NSI6 BRWD1;WDR9 Bromodomain and WD repeat-containing protein 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 656.2709 2 651.266479 1300.51841 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.69 1 47.69 47.19 48.19 -3.8147E-06 0 0 0 0.0031147 1 18513 54.023 28.011 3 2879 1218 1471 1630 4669 4669 2455;2456 ISGDLSSEEER 11 0 1 Phospho (STY) _ISGDLSS(ph)EEER_ ISGDLS(0.393)S(0.607)EEER IS(-57.4)GDLS(-1.89)S(1.89)EEER 0 0 1 0 Q9NSI6;Q5R2U8;H0Y5I9;Q5R2U6;H0Y463;Q5R2U5;H0Y4A7;Q5R2U4;H0Y4R9;Q5R2U9;H0Y500 Q9NSI6 Q9NSI6 BRWD1;WDR9 Bromodomain and WD repeat-containing protein 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 656.2699 2 651.266479 1300.51841 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.814 1 47.814 47.314 48.314 0 0 0 0 0.00095023 1 18595 67.456 35.86 3 2880 1218 1471 1630 4670 4670 2455;2456 ISGDLSSEEER 11 0 1 Phospho (STY) _ISGDLS(ph)SEEER_ ISGDLS(0.788)S(0.212)EEER IS(-60.48)GDLS(5.71)S(-5.71)EEER 0 0 1 0 Q9NSI6;Q5R2U8;H0Y5I9;Q5R2U6;H0Y463;Q5R2U5;H0Y4A7;Q5R2U4;H0Y4R9;Q5R2U9;H0Y500 Q9NSI6 Q9NSI6 BRWD1;WDR9 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 656.2717 2 651.266479 1300.51841 78437.9 1.1802 0.00076865 0.59547 0.00038781 1.7757 0.0011565 651.267460445222 656.270832767172 39.323 0.4997 39.323 39.024 39.524 0 164 42 6 0 0 0 0.0020337 1 22686 73.877 39.104 3 1.2994 0.9958 0 17669000 6901600 10767000 2881 1218 1471 1630 4671 4671 2455;2456 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 595.8187 2 590.814053 1179.61355 78610.23 1.1278 0.00066635 0.08223 4.8583E-05 1.2101 0.00071493 590.814052500015 595.818167456471 90.557 2.6787 90.557 89.16 91.839 0 981 232 8 0 0 0 6.6761E-52 7 49414 179.37 149.71 1 0.69648 0.88241 0 688120000 384910000 303210000 2882 528 1472 1631 4672;4673;4674;4675;4676;4677;4678 4675 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 595.8195 2 590.814053 1179.61355 80320.23 1.3245 0.00078255 0.12018 7.1004E-05 1.4447 0.00085355 590.814113387108 595.818185775657 102.3 1.0059 102.3 101.81 102.82 0 228 78 4 0 0 0 1.4138E-29 3 58828 158.76 129.09 1 0.78025 0.96002 0 23886000 11893000 11993000 2883 528 1472 1631 4679;4680;4681 4681 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 595.8183 2 590.814053 1179.61355 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.211 1 89.211 88.711 89.711 0 0 0 0 0.0019384 1 48836 71.349 34.158 1 2884 528 1472 1631 4682 4682 ISGLIYEETR 10 0 1 Unmodified _ISGLIYEETR_ 0 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 595.8184 2 590.814053 1179.61355 78469 1.1218 0.00066279 -0.15534 -9.1775E-05 0.96649 0.00057102 590.81392465067 595.818038129365 79.002 1.4614 79.002 78.378 79.839 0 623 139 8 0 0 0 0.00096278 2 50681 88.495 78.655 1 0.76946 0.51632 0 108890000 58876000 50015000 2885 528 1472 1631 4683;4684 4684 ISLEQPPNGSDTPNPEK 17 1 0 Phospho (STY) _ISLEQPPNGS(ph)DTPNPEK_ ISLEQPPNGS(0.756)DT(0.244)PNPEK IS(-40.69)LEQPPNGS(4.91)DT(-4.91)PNPEK 0 0 1 0 E9PJ60;Q8TDR3;Q8NEH0;Q8IYV2;Q9UHI6 E9PJ60 E9PJ60 DDX20 Probable ATP-dependent RNA helicase DDX20 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 955.9361 2 951.927678 1901.8408 NaN NaN NaN -0.028841 -2.7455E-05 NaN NaN NaN NaN 78.333 0.56837 78.333 78.007 78.575 0 0 0 0 3.9789E-05 1 40939 55.261 39.889 3 NaN NaN 0 10712000 0 10712000 2886 805 1473 1632 4685 4685 1385 ISLHPIEDNPIEEISVLSPEDLEAIK 26 1 0 Phospho (STY) _ISLHPIEDNPIEEIS(ph)VLSPEDLEAIK_ ISLHPIEDNPIEEIS(0.986)VLS(0.014)PEDLEAIK IS(-60.42)LHPIEDNPIEEIS(18.4)VLS(-18.4)PEDLEAIK 0 0 1 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 994.5004 3 994.164932 2979.47297 59941.16 0.98561 0.00097986 -0.0040941 -4.0702E-06 0.98152 0.00097579 994.499295797716 997.170499487853 133.58 0.28983 133.58 133.35 133.64 0 57 11 14 0 0 0 1.5988E-26 1 81383 89.805 89.805 3 0.79974 0.98777 0 572030000 311150000 260870000 2887 1220 1474 1633 4686 4686 2467 ISLHPIEDNPIEEISVLSPEDLEAIK 26 1 0 Phospho (STY) _ISLHPIEDNPIEEIS(ph)VLSPEDLEAIK_ IS(0.003)LHPIEDNPIEEIS(0.901)VLS(0.096)PEDLEAIK IS(-24.66)LHPIEDNPIEEIS(9.75)VLS(-9.75)PEDLEAIK 0 0 1 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 997.4957 3 994.164932 2979.47297 60252.5 0.4409 0.00043833 0.18693 0.00018584 0.62783 0.00062417 994.499986007749 997.170769450759 134.76 0.27039 134.76 134.63 134.9 0 68 7 14 0 0 0 4.0967E-06 1 86993 41.188 41.188 3 1.9626 1.31 0 365180000 122480000 242700000 2888 1220 1474 1633 4687 4687 2467 ISPDLNIK 8 1 0 Phospho (STY) _IS(ph)PDLNIK_ IS(1)PDLNIK IS(77.66)PDLNIK 0 0 1 0 E9PEI0;Q69YH5;B3KRS8 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 490.2465 2 490.246633 978.478713 86501.67 0.31816 0.00015598 -0.026527 -1.3005E-05 0.29163 0.00014297 490.246539340216 494.253648894186 85.951 1.8379 85.951 85.336 87.174 -7.6294E-06 808 176 6 0 0 0 0.0061474 3 46722 108.15 50.439 1 0.54539 0.67488 0 242090000 154460000 87634000 2889 799 1475 1634 4688;4689;4690 4689 1373 ISPDLNIK 8 1 0 Phospho (STY) _IS(ph)PDLNIK_ IS(1)PDLNIK IS(52.71)PDLNIK 0 0 1 0 E9PEI0;Q69YH5;B3KRS8 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 494.2535 2 490.246633 978.478713 86055.92 0.64129 0.00031439 -0.14657 -7.1854E-05 0.49473 0.00024254 490.246617636755 494.253575037903 88.051 2.3822 88.051 87.312 89.694 0 1095 228 8 0 0 0 0.018559 4 56772 52.705 20.61 1 1.6115 1.0757 0 359080000 137990000 221090000 2890 799 1475 1634 4691;4692;4693;4694 4692 1373 ISPIQKPQGLDPVEILQER 19 1 1 Phospho (STY) _IS(ph)PIQKPQGLDPVEILQER_ IS(1)PIQKPQGLDPVEILQER IS(40.4)PIQKPQGLDPVEILQER 0 0 1 1 P51531;A0A0U1RQZ9;F6VDE0;A0A0U1RRJ8 P51531 P51531 SMARCA2 Probable global transcription activator SNF2L2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 748.0638 3 747.394393 2239.16135 70744.91 0.80146 0.00059901 -0.43643 -0.00032618 0.36503 0.00027282 747.728597765228 753.400623607507 122.46 0.5847 122.46 122.16 122.75 0 177 42 6 0 0 0 0.00016311 1 73940 40.404 31.695 1 0.6614 0.72776 0 12054000 8582700 3471200 2891 1004 1476 1635 4695 4695 1833 ISSLLEEQFQQGK 13 1 0 Unmodified _ISSLLEEQFQQGK_ 0 0 0 0 Q5JR95;Q5JR94;P62241;Q9BS10 Q5JR95 Q5JR95 RPS8 40S ribosomal protein S8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 757.901 2 753.893563 1505.77257 72882.43 0.7239 0.00054575 -0.54601 -0.00041163 0.1779 0.00013412 754.394882683731 757.900340565912 99.056 0.30146 99.056 98.899 99.2 -7.6294E-06 59 27 4 0 0 0 0.018619 1 56361 50.194 35.775 1 1.0167 1.213 0 12784000 8317600 4466900 2892 1016 1477 1636 4696 4696 ISSLLEEQFQQGK 13 1 0 Unmodified _ISSLLEEQFQQGK_ 0 0 0 0 Q5JR95;Q5JR94;P62241;Q9BS10 Q5JR95 Q5JR95 RPS8 40S ribosomal protein S8 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 753.6555 2 753.893563 1505.77257 72493.92 1.4025 0.0010573 -0.072807 -5.4888E-05 1.3297 0.0010024 753.893273587477 758.402259390423 99.615 0.33445 99.615 99.476 99.811 7.6294E-06 57 27 4 0 0 0 1.2633E-06 1 56791 88.056 69.722 1 0.69581 0.83553 0 15167000 8443300 6723700 2893 1016 1477 1636 4697 4697 ISSLLEEQFQQGK 13 1 0 Unmodified _ISSLLEEQFQQGK_ 0 0 0 0 Q5JR95;Q5JR94;P62241;Q9BS10 Q5JR95 Q5JR95 RPS8 40S ribosomal protein S8 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 754.3954 2 753.893563 1505.77257 73818.04 0.78221 0.0005897 0.13756 0.00010371 0.91977 0.00069341 754.394859024931 757.901043525152 95.243 0.57996 95.243 94.935 95.515 -7.6294E-06 159 55 4 0 0 0 0.015964 1 61398 57.888 50.625 1 0.85261 0.63024 0 8904700 5234400 3670300 2894 1016 1477 1636 4698 4698 ISSLLEEQFQQGK 13 1 0 Phospho (STY) _ISS(ph)LLEEQFQQGK_ IS(0.002)S(0.998)LLEEQFQQGK IS(-26.14)S(26.14)LLEEQFQQGK 0 0 1 0 Q5JR95;Q5JR94;P62241;Q9BS10 Q5JR95 Q5JR95 RPS8 40S ribosomal protein S8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 797.8846 2 793.876728 1585.7389 68954.34 0.90975 0.00072223 0.11938 9.4774E-05 1.0291 0.00081701 793.876691726834 797.883761511668 109.32 0.72953 109.32 108.91 109.64 0 256 56 6 0 0 0 4.4793E-14 2 64138 110.31 96.188 2 1.1383 1.4278 0 27669000 13042000 14627000 2895 1016 1477 1637 4699;4700 4700 1848 ISSSSFSR 8 0 1 Phospho (STY) _IS(ph)SSSFSR_ IS(0.807)S(0.16)S(0.027)S(0.005)FSR IS(7.02)S(-7.02)S(-14.7)S(-22.09)FS(-35.65)R 0 0 1 0 CON__P05787;P05787;F8VUG2;F8VQY3;F8W1U3 CON__P05787;F8W1U3 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 475.7025 2 475.70259 949.390626 90284.6 0.5143 0.00024466 -0.50496 -0.00024021 0.0093412 4.4436E-06 475.702347832669 480.706588990198 48.24 0.85307 48.24 47.825 48.678 0 157 56 4 0 0 0 0.022219 1 18820 49.418 7.0821 5 1.0399 1.1381 0 6235600 3201900 3033700 + 2896 754;832 1478 1638 4701 4701 1272 ISSSSFSR 8 0 1 Unmodified _ISSSSFSR_ 0 0 0 0 CON__P05787;P05787;F8VUG2;F8VQY3;F8W1U3 CON__P05787;F8W1U3 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 440.7236 2 435.719424 869.424296 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.084 1 54.084 53.584 54.584 0 0 0 0 0.020956 1 22817 62.107 5.3864 1 + 2897 754;832 1478 1639 4702 4702 ISSSSFSR 8 0 1 Unmodified _ISSSSFSR_ 0 0 0 0 CON__P05787;P05787;F8VUG2;F8VQY3;F8W1U3 CON__P05787;F8W1U3 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 435.7188 2 435.719424 869.424296 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.213 1 54.213 53.713 54.713 0 0 0 0 0.027854 1 22903 45.68 6.7176 1 + 2898 754;832 1478 1639 4703 4703 ISVYYNEATGGK 12 1 0 Unmodified _ISVYYNEATGGK_ 0 0 0 0 B7ZAF0;Q5JP53;Q6LC01;Q5SU16;P07437;B4DY90;B4DMJ5;B4DMU8 B7ZAF0 B7ZAF0 TUBB Tubulin beta chain ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 655.3295 2 651.322242 1300.62993 NaN NaN NaN -0.32671 -0.0002128 NaN NaN NaN NaN 73.597 0.46207 73.597 73.264 73.726 0 0 0 0 0.0037571 1 37374 64.439 34.966 1 NaN NaN 0 9971800 0 9971800 2899 718 1479 1640 4704 4704 ISYIPDEEVSSPSPPQR 17 0 1 Phospho (STY) _ISYIPDEEVS(ph)SPSPPQR_ IS(0.001)Y(0.001)IPDEEVS(0.444)S(0.444)PS(0.111)PPQR IS(-28.65)Y(-29.11)IPDEEVS(0)S(0)PS(-6.04)PPQR 0 0 1 0 F8W930;Q9Y6M1 F8W930 F8W930 IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 990.9551 2 990.951153 1979.88775 63986.02 0.97917 0.00097031 0.5749 0.0005697 1.5541 0.00154 990.951899265548 996.456552585247 93.068 0.5378 93.068 92.715 93.253 0 118 44 5 0 0 0 0.00024513 2 51662 46.318 46.318 5 0.43795 0.52354 0 16773000 8331600 8441100 2900 834 1480 1641 4705;4706 4705 1439;1440;1441 ISYIPDEEVSSPSPPQR 17 0 1 2 Phospho (STY) _ISYIPDEEVS(ph)SPS(ph)PPQR_ ISYIPDEEVS(0.648)S(0.399)PS(0.953)PPQR IS(-38.96)Y(-44.77)IPDEEVS(2.33)S(-2.33)PS(11.03)PPQR 0 0 2 0 F8W930;Q9Y6M1 F8W930 F8W930 IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1030.9354 2 1030.93432 2059.85408 60488.18 0.41759 0.00043051 -0.25545 -0.00026335 0.16214 0.00016716 1030.93422365498 1036.43923469289 98.697 1.0092 98.697 98.213 99.222 0 495 84 10 0 0 0 3.9698E-05 2 56012 62.055 62.055 10 0.69589 0.87578 0 48610000 27504000 21107000 2901 834 1480 1642 4707;4708 4708 1439;1440;1441 ISYIPDEEVSSPSPPQR 17 0 1 2 Phospho (STY) _ISYIPDEEVSS(ph)PS(ph)PPQR_ ISYIPDEEVS(0.477)S(0.539)PS(0.984)PPQR IS(-36.77)Y(-38.9)IPDEEVS(-0.55)S(0.55)PS(15.06)PPQR 0 0 2 0 F8W930;Q9Y6M1 F8W930 F8W930 IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1035.9395 2 1030.93432 2059.85408 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.532 1 98.532 98.032 99.032 0 0 0 0 0.0011727 1 55984 51.695 41.037 10 2902 834 1480 1642 4709 4709 1439;1440;1441 ISYQRDSDENLTDAEGK 17 1 1 Phospho (STY) _ISYQRDS(ph)DENLTDAEGK_ IS(0.015)Y(0.222)QRDS(0.743)DENLT(0.02)DAEGK IS(-16.97)Y(-5.26)QRDS(5.26)DENLT(-15.62)DAEGK 0 0 1 1 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 674.2887 3 674.288029 2019.84226 NaN NaN NaN 0.66565 0.00044884 NaN NaN NaN NaN 63.508 0.67624 63.508 63.176 63.853 0 0 0 0 0.001193 1 29837 40.88 19.68 4 NaN NaN 0 24322000 24322000 0 2903 799 1481 1643 4710 4710 1374 ISYQRDSDENLTDAEGK 17 1 1 Phospho (STY) _ISYQRDS(ph)DENLTDAEGK_ IS(0.013)Y(0.014)QRDS(0.967)DENLT(0.005)DAEGK IS(-18.71)Y(-18.27)QRDS(18.27)DENLT(-22.7)DAEGK 0 0 1 1 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 680.3068 3 674.288029 2019.84226 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.327 1 63.327 62.827 63.827 0 0 0 0 0.00030882 1 29797 52.541 24.339 4 2904 799 1481 1643 4711 4711 1374 ISYQRDSDENLTDAEGK 17 1 1 Phospho (STY) _ISYQRDS(ph)DENLTDAEGK_ IS(0.025)Y(0.011)QRDS(0.963)DENLT(0.001)DAEGK IS(-15.88)Y(-19.43)QRDS(15.88)DENLT(-29.71)DAEGK 0 0 1 1 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 680.2981 3 674.288029 2019.84226 73109.94 1.0494 0.00070758 0.16398 0.00011057 1.2134 0.00081815 674.288314740508 680.295735920817 50.413 1.1717 50.413 49.846 51.017 0 586 105 8 0 0 0 1.1572E-05 1 30540 67.11 43.081 4 2.4176 1.857 0 29332000 9514000 19818000 2905 799 1481 1643 4712 4712 1374 ITDGLHALQEASNK 14 1 0 Unmodified _ITDGLHALQEASNK_ 0 0 0 0 B7ZLZ7;A0A024R158;O95347;Q05BV1;A8K984;Q2KQ72;B3KMB1 B7ZLZ7 B7ZLZ7 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 752.8954 2 748.888812 1495.76307 72138.8 1.1289 0.00084541 -0.015008 -1.1239E-05 1.1139 0.00083417 748.88885772639 752.895735050183 92.606 0.48642 92.606 92.325 92.812 0 117 42 5 0 0 0 1.8896E-07 1 51449 94.122 73.915 1 0.88828 1.0866 0 19685000 10490000 9195500 2906 39 1482 1644 4713 4713 ITERNLLSK 9 1 1 Phospho (STY) _ITERNLLS(ph)K_ ITERNLLS(1)K IT(-58.51)ERNLLS(58.51)K 0 0 1 1 A0A126LAY3 A0A126LAY3 A0A126LAY3 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 577.3021 2 577.302471 1152.59039 NaN NaN NaN NaN NaN NaN NaN NaN NaN 107.24 1 107.24 106.74 107.74 0 0 0 0 0.0017684 1 62554 73.887 8.6453 2 2907 373 1483 1645 4714 4714 594 ITEVSCKSPQPDPVK 15 2 0 Phospho (STY) _ITEVSCKS(ph)PQPDPVK_ ITEVS(0.001)CKS(0.999)PQPDPVK IT(-70.22)EVS(-32.5)CKS(32.5)PQPDPVK 0 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 588.9464 3 588.94611 1763.8165 77023.2 0.85934 0.0005061 -0.19724 -0.00011617 0.6621 0.00038994 589.280435838074 594.288883080786 45.49 3.0926 45.49 43.763 46.855 0 1602 288 8 0 0 0 4.3982E-13 5 26932 107.45 77.873 3 2.8024 2.0868 0 141160000 35806000 105360000 2908 994 1484 1646 4715;4716;4717;4718;4719 4717 1785 ITEVSCKSPQPDPVK 15 2 0 Phospho (STY) _ITEVSCKS(ph)PQPDPVK_ ITEVSCKS(1)PQPDPVK IT(-105.05)EVS(-49.42)CKS(49.42)PQPDPVK 0 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 890.9307 2 882.915527 1763.8165 64382.5 0.9579 0.00084575 -0.16313 -0.00014403 0.79477 0.00070172 882.915598392083 890.929715689758 45.382 3.1812 45.382 43.753 46.934 -3.8147E-06 1727 296 10 0 0 0 1.1644E-62 3 26424 170.09 138.02 3 3.0898 2.2937 0 177640000 46379000 131260000 2909 994 1484 1646 4720;4721;4722 4720 1785 ITEVSCKSPQPESFK 15 2 0 Phospho (STY) _ITEVSCKS(ph)PQPESFK_ ITEVS(0.011)CKS(0.959)PQPES(0.03)FK IT(-74.31)EVS(-19.32)CKS(15.12)PQPES(-15.12)FK 0 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 611.6214 3 606.277749 1815.81142 73587.57 1.0667 0.00064671 -0.19856 -0.00012038 0.86812 0.00052632 606.277926723419 611.620615101873 52.383 1.8052 52.383 51.583 53.388 0 1045 161 11 0 0 0 7.0359E-13 3 31963 105.77 74.776 4 2.1222 1.5727 0 201720000 63518000 138200000 2910 994 1485 1647 4723;4724;4725 4724 1786 ITEVSCKSPQPESFK 15 2 0 Phospho (STY) _ITEVSCKS(ph)PQPESFK_ ITEVSCKS(0.999)PQPESFK IT(-58.49)EVS(-35.25)CKS(33.91)PQPES(-33.91)FK 0 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 908.9137 2 908.912985 1815.81142 63257.78 1.1569 0.0010515 -0.035169 -3.1966E-05 1.1218 0.0010196 909.414549327548 916.927197294555 52.343 1.25 52.343 51.839 53.089 0 674 114 8 0 0 0 1.1499E-06 2 31687 87.767 79.254 4 2.1414 1.6049 0 87296000 28552000 58744000 2911 994 1485 1647 4726;4727 4726 1786 ITEVSCKSPQPESFK 15 2 0 Phospho (STY) _ITEVSCKS(ph)PQPESFK_ ITEVS(0.263)CKS(0.682)PQPES(0.055)FK IT(-35.48)EVS(-4.14)CKS(4.14)PQPES(-10.94)FK 0 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 611.6203 3 606.277749 1815.81142 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.578 1 53.578 53.078 54.078 0 0 0 0 0.0010829 1 32638 43.794 30.564 4 2912 994 1485 1647 4728 4728 1786 ITSPLMEPSSIEK 13 1 0 Oxidation (M),Phospho (STY) _ITS(ph)PLM(ox)EPSSIEK_ ITSPLM(1)EPSSIEK IT(0.114)S(0.886)PLMEPSSIEK ITSPLM(76.23)EPSSIEK IT(-8.89)S(8.89)PLMEPS(-49.13)S(-49.13)IEK 0 1 1 0 Q5U0A0;A0A109NGN6;P28066 Q5U0A0 Q5U0A0 PSMA5 Proteasome subunit alpha type;Proteasome subunit alpha type-5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 768.3618 2 764.35424 1526.69393 70323.26 0.91054 0.00069597 0.1218 9.3095E-05 1.0323 0.00078907 764.355276542591 768.361163419395 80.748 0.95187 80.748 80.281 81.233 0 284 86 5 0 0 0 0.00049401 2 42590 76.228 62.021 4 1.8057 2.2891 0 34492000 12947000 21545000 2913 371 1486 1648 4729;4730 4729 89 593 ITVTSEVPFSK 11 1 0 Unmodified _ITVTSEVPFSK_ 0 0 0 0 K7EJT5;K7EP65;K7EKS7;K7ELC4;K7EMH1;K7ERI7;Q7Z4W8;P35268 K7EJT5 K7EJT5 RPL22 60S ribosomal protein L22 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 608.3392 2 604.332079 1206.6496 NaN NaN NaN -0.50493 -0.00030515 NaN NaN NaN NaN 96.922 0.12849 96.922 96.882 97.011 0 0 0 0 0.015636 1 54753 53.751 27.646 1 NaN NaN 0 3647000 0 3647000 2914 902 1487 1649 4731 4731 ITVTSEVPFSK 11 1 0 Unmodified _ITVTSEVPFSK_ 0 0 0 0 K7EJT5;K7EP65;K7EKS7;K7ELC4;K7EMH1;K7ERI7;Q7Z4W8;P35268 K7EJT5 K7EJT5 RPL22 60S ribosomal protein L22 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 604.3339 2 604.332079 1206.6496 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.728 1 96.728 96.228 97.228 0 0 0 0 0.0032184 1 54594 61.161 32.012 1 2915 902 1487 1649 4732 4732 ITVTSEVPFSK 11 1 0 Unmodified _ITVTSEVPFSK_ 0 0 0 0 K7EJT5;K7EP65;K7EKS7;K7ELC4;K7EMH1;K7ERI7;Q7Z4W8;P35268 K7EJT5 K7EJT5 RPL22 60S ribosomal protein L22 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 604.3323 2 604.332079 1206.6496 NaN NaN NaN 0.057175 3.4553E-05 NaN NaN NaN NaN 92.847 0.19418 92.847 92.679 92.873 -7.6294E-06 0 0 0 0.015694 1 59791 53.683 20.842 1 NaN NaN 0 1931000 1931000 0 2916 902 1487 1649 4733 4733 IVEPEVVGESDSEVEGDAWR 20 0 1 2 Phospho (STY) _IVEPEVVGES(ph)DS(ph)EVEGDAWR_ IVEPEVVGES(1)DS(1)EVEGDAWR IVEPEVVGES(41.35)DS(41.35)EVEGDAWR 0 0 2 0 P55081 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1181.4811 2 1181.47982 2360.94508 56814.08 0.1849 0.00021845 0.62041 0.000733 0.80531 0.00095145 1182.48441648145 1186.48408601814 114.28 0.65858 114.28 113.96 114.62 0 309 57 7 0 0 0 0.00014972 1 67865 41.348 41.348 1 0.81778 1.0274 0 42473000 18409000 24064000 2917 1008 1488 1650 4734 4734 1836;1837 IVEYSPPSAPR 11 0 1 Phospho (STY) _IVEYS(ph)PPSAPR_ IVEYS(1)PPSAPR IVEY(-42.86)S(37.94)PPS(-37.94)APR 0 0 1 0 Q86X06;A0A024R4V5;A0A024R4W4;O95696;B4E3L9 Q86X06 Q86X06 BRD1 Bromodomain-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 653.3098 2 648.30521 1294.59587 75408 0.78547 0.00050923 0.20393 0.00013221 0.9894 0.00064144 648.305254620709 653.309307882493 72.54 1.5137 72.54 71.761 73.275 0 618 129 7 0 0 0 4.7555E-19 2 36793 140.91 98.905 3 0.97082 1.2262 0 123090000 66711000 56384000 2918 94 1489 1651 4735;4736 4736 122;123 IVEYSPPSAPR 11 0 1 Phospho (STY) _IVEYS(ph)PPSAPR_ IVEY(0.064)S(0.931)PPS(0.005)APR IVEY(-11.64)S(11.64)PPS(-22.62)APR 0 0 1 0 Q86X06;A0A024R4V5;A0A024R4W4;O95696;B4E3L9 Q86X06 Q86X06 BRD1 Bromodomain-containing protein 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 648.3055 2 648.30521 1294.59587 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.844 1 71.844 71.344 72.344 0 0 0 0 0.0002403 1 36190 74.46 42.452 3 2919 94 1489 1651 4737 4737 122;123 IVEYSPPSAPR 11 0 1 Phospho (STY) _IVEYS(ph)PPSAPR_ IVEY(0.001)S(0.994)PPS(0.005)APR IVEY(-32.56)S(22.95)PPS(-22.95)APR 0 0 1 0 Q86X06;A0A024R4V5;A0A024R4W4;O95696;B4E3L9 Q86X06 Q86X06 BRD1 Bromodomain-containing protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 653.3107 2 648.30521 1294.59587 75328.7 1.1237 0.0007285 -0.091834 -5.9537E-05 1.0319 0.00066896 648.305372903005 653.309234687766 73.033 2.0811 73.033 72.108 74.189 7.6294E-06 1032 184 8 0 0 0 1.5348E-05 4 46608 94.122 60.893 3 1.9649 1.3003 0 217390000 70603000 146790000 2920 94 1489 1651 4738;4739;4740;4741 4740 122;123 IVEYSPPSAPR 11 0 1 2 Phospho (STY) _IVEYS(ph)PPS(ph)APR_ IVEY(0.315)S(0.688)PPS(0.997)APR IVEY(-3.41)S(3.41)PPS(24.03)APR 0 0 2 0 Q86X06;A0A024R4V5;A0A024R4W4;O95696;B4E3L9 Q86X06 Q86X06 BRD1 Bromodomain-containing protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 693.2936 2 688.288376 1374.5622 73522.1 0.93303 0.0006422 0.38414 0.0002644 1.3172 0.0009066 688.288563941819 693.292578952683 82.593 1.2184 82.593 81.993 83.211 0 452 112 6 0 0 0 0.0057985 2 52698 61.212 38.738 3 1.8408 1.28 0 39098000 14038000 25060000 2921 94 1489 1652 4742;4743 4742 122;123 IVLHPDTEHSK 11 1 0 Unmodified _IVLHPDTEHSK_ 0 0 0 0 A0A024R753;Q9NW13;H7C5G8;B4DJ90 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 425.8944 3 425.894577 1274.6619 93850.98 0.010061 4.285E-06 0.67753 0.00028856 0.68759 0.00029284 425.89460364946 428.566089332013 86.871 0.5172 86.871 86.497 87.014 0 122 48 6 0 0 0 0.015625 1 46945 33.542 22.932 1 0.83138 1.0248 0 22987000 11848000 11138000 2922 128 1490 1653 4744 4744 IVLHPDTEHSK 11 1 0 Unmodified _IVLHPDTEHSK_ 0 0 0 0 A0A024R753;Q9NW13;H7C5G8;B4DJ90 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 428.5662 3 425.894577 1274.6619 94293.88 -0.085622 -3.6466E-05 1.3344 0.0005683 1.2488 0.00053184 425.894628794662 428.566033064491 87.959 0.91022 87.959 87.602 88.512 7.6294E-06 208 82 6 0 0 0 0.024742 1 48046 27.378 18.488 1 0.83179 1.0556 0 38937000 24914000 14023000 2923 128 1490 1653 4745 4745 IVLHPDTEHSK 11 1 0 Unmodified _IVLHPDTEHSK_ 0 0 0 0 A0A024R753;Q9NW13;H7C5G8;B4DJ90 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 428.5657 3 425.894577 1274.6619 92663.03 -0.058359 -2.4855E-05 -0.30682 -0.00013067 -0.36518 -0.00015553 425.894501308494 428.565892367582 19.687 0.18922 19.687 19.574 19.763 0 32 7 6 0 0 0 0.025156 1 6643 27.098 27.098 1 1.232 1.0464 0 4452200 1938100 2514200 2924 128 1490 1653 4746 4746 IVPQSQVPNPESPGK 15 1 0 Phospho (STY) _IVPQSQVPNPES(ph)PGK_ IVPQSQVPNPES(1)PGK IVPQS(-38.7)QVPNPES(38.7)PGK 0 0 1 0 Q9ULM3 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 828.9042 2 828.903277 1655.792 68596.08 0.48374 0.00040098 0.23862 0.00019779 0.72236 0.00059877 828.903618525008 832.910671970233 68.521 0.89275 68.521 68.152 69.045 0 342 85 6 0 0 0 0.00024876 3 33775 70.98 63.717 2 0.71703 0.91011 0 39783000 20091000 19692000 2925 1239 1491 1654 4747;4748;4749 4747 2536 IVPQSQVPNPESPGK 15 1 0 Phospho (STY) _IVPQSQVPNPES(ph)PGK_ IVPQS(0.002)QVPNPES(0.998)PGK IVPQS(-28.11)QVPNPES(28.11)PGK 0 0 1 0 Q9ULM3 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 828.9044 2 828.903277 1655.792 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.1 1 69.1 68.6 69.6 0 0 0 0 0.0014773 1 34358 45.33 32.374 2 2926 1239 1491 1654 4750 4750 2536 IVSDGEDEDDSFK 13 1 0 Phospho (STY) _IVS(ph)DGEDEDDSFK_ IVS(1)DGEDEDDSFK IVS(76.27)DGEDEDDS(-76.27)FK 0 0 1 0 B5MDQ0;Q2NKX8 B5MDQ0 B5MDQ0 ERCC6L DNA excision repair protein ERCC-6-like MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 772.3015 2 768.292891 1534.57123 69283.47 0.66898 0.00051397 -0.62953 -0.00048366 0.039447 3.0307E-05 768.293704800166 772.300161779765 62.088 0.99734 62.088 61.546 62.544 0 177 70 5 0 0 0 2.7153E-06 2 28763 92.935 62.931 2 1.2243 1.5047 0 22186000 8375900 13810000 2927 697 1492 1655 4751;4752 4751 1149;1150 IVSDGEDEDDSFK 13 1 0 Phospho (STY) _IVS(ph)DGEDEDDSFK_ IVS(1)DGEDEDDSFK IVS(38.71)DGEDEDDS(-38.71)FK 0 0 1 0 B5MDQ0;Q2NKX8 B5MDQ0 B5MDQ0 ERCC6L DNA excision repair protein ERCC-6-like MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 772.2994 2 768.292891 1534.57123 70719.21 1.1696 0.00089857 -1.2642 -0.00097131 -0.094682 -7.2744E-05 768.291832370346 772.298988432343 60.415 1.0457 60.415 59.931 60.977 0 335 97 6 0 0 0 0.0047458 1 37336 58.723 37.174 2 1.9883 1.5184 0 17534000 6127500 11407000 2928 697 1492 1655 4753 4753 1149;1150 IVSDGEDEDDSFK 13 1 0 2 Phospho (STY) _IVS(ph)DGEDEDDS(ph)FK_ IVS(1)DGEDEDDS(1)FK IVS(57.33)DGEDEDDS(57.33)FK 0 0 2 0 B5MDQ0;Q2NKX8 B5MDQ0 B5MDQ0 ERCC6L DNA excision repair protein ERCC-6-like ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 812.2843 2 808.276056 1614.53756 NaN NaN NaN -0.03684 -2.9777E-05 NaN NaN NaN NaN 61.056 0.81475 61.056 60.502 61.317 -3.8147E-06 0 0 0 0.0006366 1 27738 57.328 29.664 1 NaN NaN 0 9004000 0 9004000 2929 697 1492 1656 4754 4754 1149;1150 IVSGSPISTPSPSPLPR 17 0 1 2 Phospho (STY) _IVSGS(ph)PISTPSPS(ph)PLPR_ IVS(0.42)GS(0.577)PIS(0.002)T(0.005)PS(0.052)PS(0.943)PLPR IVS(-1.39)GS(1.39)PIS(-27.61)T(-24.38)PS(-12.67)PS(12.67)PLPR 0 0 2 0 Q9ULM3 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 926.434 2 926.436299 1850.85805 67964.45 1.2797 0.0011855 -0.50277 -0.00046579 0.7769 0.00071975 926.435650634724 931.940977067972 102.58 0.51236 102.58 102.33 102.84 0 91 37 5 0 0 0 1.3493E-05 1 59049 69.522 55.616 15 0.87674 0.96085 0 6839700 3576900 3262800 2930 1239 1493 1657 4755 4755 2537;2538;2539;2540;3002 IVSGSPISTPSPSPLPR 17 0 1 3 Phospho (STY) _IVSGS(ph)PIS(ph)TPS(ph)PSPLPR_ IVS(0.352)GS(0.648)PIS(0.501)T(0.501)PS(0.894)PS(0.105)PLPR IVS(-2.68)GS(2.68)PIS(0)T(0)PS(9.42)PS(-9.42)PLPR 0 0 3 0 Q9ULM3 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 971.4272 2 966.419465 1930.82438 62835.92 0.62133 0.00060047 0.28135 0.0002719 0.90268 0.00087237 966.419772887049 971.423087350907 107.54 0.88993 107.54 107.07 107.95 -7.6294E-06 286 67 7 0 0 0 1.922E-09 3 62614 86.641 69.013 20 0.55867 0.68727 0 24733000 15928000 8804400 2931 1239 1493 1658 4756;4757;4758 4757 2537;2538;2539;2540;3002 IYHLPDAESDEDEDFK 16 1 0 Phospho (STY) _IYHLPDAES(ph)DEDEDFK_ IY(0.001)HLPDAES(0.999)DEDEDFK IY(-32.67)HLPDAES(32.67)DEDEDFK 0 0 1 0 H7C2Y0;B5MCX3;Q15019 H7C2Y0 H7C2Y0 SEPT2 Septin-2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1001.9021 2 1001.90133 2001.7881 61510.56 0.93409 0.00093587 -1.0825 -0.0010846 -0.14842 -0.0001487 1001.90131742179 1006.40763035196 96.825 1.0295 96.825 96.397 97.426 0 458 85 8 0 0 0 0.00036759 1 54391 45.434 34.49 2 1.912 2.3888 0 66439000 26220000 40220000 2932 695 1494 1659 4759 4759 1143 IYHLPDAESDEDEDFK 16 1 0 Phospho (STY) _IYHLPDAES(ph)DEDEDFK_ IYHLPDAES(1)DEDEDFK IY(-34.36)HLPDAES(34.36)DEDEDFK 0 0 1 0 H7C2Y0;B5MCX3;Q15019 H7C2Y0 H7C2Y0 SEPT2 Septin-2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1006.4125 2 1001.90133 2001.7881 61421.75 0.13688 0.00013714 1.1332 0.0011353 1.2701 0.0012725 1002.40394102222 1005.90971357536 93.333 0.9091 93.333 93.006 93.915 7.6294E-06 550 89 9 0 0 0 0.00092232 1 60073 42.338 25.458 2 0.9477 0.61763 0 42289000 19903000 22386000 2933 695 1494 1659 4760 4760 1143 IYISNTFSPSK 11 1 0 Phospho (STY) _IYISNTFS(ph)PSK_ IYISNT(0.034)FS(0.878)PS(0.088)K IY(-113.94)IS(-33.25)NT(-14.11)FS(10.01)PS(-10.01)K 0 0 1 0 J3KMX2;B9EGA3;Q92925 J3KMX2 J3KMX2 SMARCD2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 672.8193 2 668.812868 1335.61118 NaN NaN NaN 0.044479 2.9748E-05 NaN NaN NaN NaN 91.741 0.71242 91.741 91.417 92.129 0 0 0 0 9.9204E-32 1 50721 127.71 81.289 5 NaN NaN 0 12786000 0 12786000 2934 730 1495 1660 4761 4761 1205 IYISNTFSPSK 11 1 0 Phospho (STY) _IYISNTFS(ph)PSK_ IYISNT(0.017)FS(0.77)PS(0.213)K IY(-89.38)IS(-43.82)NT(-16.66)FS(5.58)PS(-5.58)K 0 0 1 0 J3KMX2;B9EGA3;Q92925 J3KMX2 J3KMX2 SMARCD2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 673.3223 2 668.812868 1335.61118 75767.01 0.84907 0.00056787 0.10343 6.9175E-05 0.9525 0.00063705 668.812836519471 672.819894431076 93.059 0.90483 93.059 92.638 93.542 0 416 89 8 0 0 0 2.1851E-08 1 59812 102.33 69.491 5 1.5603 1.0732 0 24483000 9288100 15195000 2935 730 1495 1660 4762 4762 1205 IYNISGNGSPLADSK 15 1 0 Phospho (STY) _IYNISGNGS(ph)PLADSK_ IYNISGNGS(1)PLADSK IY(-140.31)NIS(-51.47)GNGS(40.39)PLADS(-40.39)K 0 0 1 0 Q53HL2 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 808.8743 2 808.37181 1614.72907 66987.54 0.86618 0.00070019 -0.054888 -4.437E-05 0.81129 0.00065582 808.371889786481 812.378797128379 81.572 2.7572 81.572 80.6 83.357 0 1750 254 12 0 0 0 5.5102E-90 5 43929 193.32 157.38 4 1.0058 1.2389 0 1980800000 973430000 1007300000 2936 1090 1496 1661 4763;4764;4765;4766;4767 4767 2055 IYNISGNGSPLADSK 15 1 0 Phospho (STY) _IYNISGNGS(ph)PLADSK_ IYNIS(0.001)GNGS(0.97)PLADS(0.03)K IY(-71.56)NIS(-31.15)GNGS(15.16)PLADS(-15.16)K 0 0 1 0 Q53HL2 Q53HL2 Q53HL2 CDCA8 Borealin MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 812.379 2 808.37181 1614.72907 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.581 1 80.581 80.081 81.081 0 0 0 0 8.1131E-06 1 42714 80.632 51.674 4 2937 1090 1496 1661 4768 4768 2055 IYNISGNGSPLADSK 15 1 0 Phospho (STY) _IYNISGNGS(ph)PLADSK_ IYNISGNGS(0.998)PLADS(0.002)K IY(-128.53)NIS(-46.56)GNGS(27.44)PLADS(-27.44)K 0 0 1 0 Q53HL2 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 812.3792 2 808.37181 1614.72907 66726.4 0.97898 0.00079138 -0.70102 -0.00056668 0.27796 0.0002247 808.371826528032 812.378538266629 83.788 3.6732 83.788 82.956 86.63 0 1441 339 10 0 0 0 8.036E-34 2 53519 142.54 105.43 4 1.5541 1.0337 0 3192100000 1226900000 1965200000 2938 1090 1496 1661 4769;4770 4769 2055 IYPTFLHLHGK 11 1 0 Unmodified _IYPTFLHLHGK_ 0 0 0 0 A0A024R4Z6;Q08945;E9PMD4 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 442.5831 3 442.583674 1324.72919 91858.26 0.31911 0.00014123 -0.0040242 -1.7811E-06 0.31509 0.00013945 442.583597113997 445.255041942424 101.28 0.16458 101.28 101.19 101.36 0 53 14 5 0 0 0 0.0030724 2 65114 63.073 63.073 1 1.049 0.87808 0 5159000 2330000 2829000 2939 99 1497 1662 4771;4772 4771 IYQYIQSR 8 0 1 Phospho (STY) _IYQY(ph)IQSR_ IYQY(0.966)IQS(0.033)R IY(-36.63)QY(14.62)IQS(-14.62)R 0 0 1 0 Q15446;B4DXU2;B4DX02;A0A024R0J6;A0A024R0M8;B3KQI0;A0A024R0I0;Q9Y463;Q13627 Q15446 Q15446 DYRK1B;DYRK1A Dual specificity tyrosine-phosphorylation-regulated kinase 1B;Dual specificity tyrosine-phosphorylation-regulated kinase 1A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 575.7689 2 575.768264 1149.52197 81287.77 0.46871 0.00026987 0.33179 0.00019104 0.8005 0.0004609 575.768519064149 581.273456785986 45.693 1.0275 45.693 45.253 46.281 0 211 94 5 0 0 0 0.010957 2 27019 49.423 43.941 3 0.68069 0.55322 0 6804900 4977600 1827300 2940 29 1498 1663 4773;4774 4774 3014 IYQYIQSR 8 0 1 Phospho (STY) _IYQY(ph)IQSR_ IYQY(0.974)IQS(0.026)R IY(-51.01)QY(15.69)IQS(-15.69)R 0 0 1 0 Q15446;B4DXU2;B4DX02;A0A024R0J6;A0A024R0M8;B3KQI0;A0A024R0I0;Q9Y463;Q13627 Q15446 Q15446 DYRK1B;DYRK1A Dual specificity tyrosine-phosphorylation-regulated kinase 1B;Dual specificity tyrosine-phosphorylation-regulated kinase 1A MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 580.7726 2 575.768264 1149.52197 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.708 1 45.708 45.208 46.208 3.8147E-06 0 0 0 0.0046086 1 27212 73.248 26.181 3 2941 29 1498 1663 4775 4775 3014 IYSYMSPNK 9 1 0 Oxidation (M),Phospho (STY) _IYSYM(ox)S(ph)PNK_ IYSYM(1)SPNK IYSYMS(1)PNK IYSYM(106.62)SPNK IY(-78.44)S(-41.96)Y(-53.45)MS(41.96)PNK 0 1 1 0 E3VVS3;A0A0C4DFR3;Q9NQR1;C9JKQ0 E3VVS3 E3VVS3 SETD8 N-lysine methyltransferase SETD8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 603.7536 2 599.74614 1197.47773 77824.51 0.91 0.00054577 -0.32599 -0.00019551 0.58401 0.00035025 599.746078413695 603.752990781401 48.208 1.5964 48.208 47.362 48.958 0 508 111 7 0 0 0 6.0643E-05 3 19000 110.38 83.493 4 2.5177 3.0953 0 22404000 6499600 15905000 2942 314 1499 1664 4776;4777;4778 4778 76 497 IYSYMSPNK 9 1 0 Oxidation (M),Phospho (STY) _IYSYM(ox)S(ph)PNK_ IYSYM(1)SPNK IYS(0.005)Y(0.001)MS(0.994)PNK IYSYM(72.53)SPNK IY(-53.44)S(-23.37)Y(-29.93)MS(23.37)PNK 0 1 1 0 E3VVS3;A0A0C4DFR3;Q9NQR1;C9JKQ0 E3VVS3 E3VVS3 SETD8 N-lysine methyltransferase SETD8 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 599.747 2 599.74614 1197.47773 78216.52 0.81748 0.00049028 0.23303 0.00013976 1.0505 0.00063004 599.74626543869 603.753364570054 37.195 0.54076 37.195 36.915 37.455 0 273 46 7 0 0 0 0.0012102 2 21173 72.531 57.714 4 1.8317 1.1941 0 42823000 15676000 27147000 2943 314 1499 1664 4779;4780 4780 76 497 IYSYMSPNK 9 1 0 Oxidation (M),Phospho (STY) _IYSYM(ox)S(ph)PNK_ IYSYM(1)SPNK IYS(0.006)Y(0.004)MS(0.99)PNK IYSYM(61.96)SPNK IY(-38)S(-22.11)Y(-24.23)MS(22.11)PNK 0 1 1 0 E3VVS3;A0A0C4DFR3;Q9NQR1;C9JKQ0 E3VVS3 E3VVS3 SETD8 N-lysine methyltransferase SETD8 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 603.7537 2 599.74614 1197.47773 78216.49 0.85402 0.0005122 -0.19712 -0.00011822 0.6569 0.00039397 599.745954778445 603.753132344993 37.681 0.70259 37.681 37.414 38.117 3.8147E-06 339 61 7 0 0 0 0.0064239 1 21618 61.958 53.559 4 1.8125 1.1832 0 45223000 15978000 29245000 2944 314 1499 1664 4781 4781 76 497 KADVEEEFLAFR 12 1 1 Unmodified _KADVEEEFLAFR_ 0 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 491.2562 3 485.248908 1452.72489 88701.3 0.11844 5.7474E-05 0.76791 0.00037263 0.88635 0.0004301 485.249950278048 491.256428035196 146.89 0.53891 146.89 146.83 147.37 0 170 52 6 0 0 0 0.00046707 1 84715 62.088 42.249 1 1.3832 1.4852 0 4751100 1851900 2899200 2945 994 1500 1665 4782 4782 KADVEEEFLAFR 12 1 1 Unmodified _KADVEEEFLAFR_ 0 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 491.5911 3 485.248908 1452.72489 NaN NaN NaN 0.28553 0.00013855 NaN NaN NaN NaN 146.13 0.37459 146.13 145.95 146.33 0 0 0 0 0.0062298 1 84325 45.257 31.829 1 NaN NaN 0 748790 0 748790 2946 994 1500 1665 4783 4783 KADVEEEFLAFRK 13 2 1 Unmodified _KADVEEEFLAFRK_ 0 0 0 2 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 536.6262 3 527.947229 1580.81986 83933.54 0.96851 0.00051132 -0.2629 -0.0001388 0.7056 0.00037252 527.946932684951 536.625982773923 101.4 0.18489 101.4 101.3 101.49 0 62 15 6 0 0 0 0.0019677 2 65186 48.277 43.428 1 4.1444 3.5519 0 9626300 1393500 8232800 2947 994 1501 1666 4784;4785 4784 KADVEEEFLALR 12 1 1 Unmodified _KADVEEEFLALR_ 0 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 479.593 3 473.920791 1418.74054 96825.36 0.22219 0.0001053 -0.011693 -5.5416E-06 0.2105 9.9761E-05 473.921226854364 479.928105283644 146.49 0.2328 146.49 146.41 146.65 0 46 20 4 0 0 0 0.019046 1 84556 26.627 22.657 1 3.9075 4.1821 0 1529800 444180 1085600 2948 994 1502 1667 4786 4786 KADVEEEFLALRK 13 2 1 Unmodified _KADVEEEFLALRK_ 0 0 0 2 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 525.2979 3 516.619112 1546.83551 NaN NaN NaN -0.48363 -0.00024985 NaN NaN NaN NaN 100.92 0.2801 100.92 100.79 101.07 0 0 0 0 0.00087285 1 64851 62.732 50.172 1 NaN NaN 0 5323900 0 5323900 2949 994 1503 1668 4787 4787 KAEAGAGSATEFQFR 15 1 1 Unmodified _KAEAGAGSATEFQFR_ 0 0 0 1 Q59GE4;P46783;Q9NQ39 Q59GE4 Q59GE4 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 529.934 3 523.926716 1568.75832 84418.11 1.1819 0.00061925 -0.2853 -0.00014947 0.89664 0.00046977 523.926532618764 529.93404875817 101.07 0.6193 101.07 100.64 101.26 0 133 46 5 0 0 0 0.00010223 1 57961 70.451 62.668 1 1.4562 1.7016 0 34689000 9840900 24849000 2950 996 1504 1669 4788 4788 KAEAGAGSATEFQFR 15 1 1 Unmodified _KAEAGAGSATEFQFR_ 0 0 0 1 Q59GE4;P46783;Q9NQ39 Q59GE4 Q59GE4 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 523.9274 3 523.926716 1568.75832 NaN NaN NaN 0.35049 0.00018363 NaN NaN NaN NaN 100.31 0.22892 100.31 100.14 100.37 0 0 0 0 0.0022658 1 57322 32.341 19.714 1 NaN NaN 0 10486000 10486000 0 2951 996 1504 1669 4789 4789 KAEAVVNTVDISER 14 1 1 Unmodified _KAEAVVNTVDISER_ 0 0 0 1 B4DKU3;Q8IY81 B4DKU3 B4DKU3 FTSJ3 pre-rRNA processing protein FTSJ3 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 510.9426 3 510.942255 1529.80494 NaN NaN NaN 0.22493 0.00011493 NaN NaN NaN NaN 94.179 0.82879 94.179 93.909 94.738 -7.6294E-06 0 0 0 0.00024265 1 52572 56.514 44.456 1 NaN NaN 0 27872000 27872000 0 2952 632 1505 1670 4790 4790 KAEAVVNTVDISER 14 1 1 Unmodified _KAEAVVNTVDISER_ 0 0 0 1 B4DKU3;Q8IY81 B4DKU3 B4DKU3 FTSJ3 pre-rRNA processing protein FTSJ3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 516.9504 3 510.942255 1529.80494 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.163 1 94.163 93.663 94.663 0 0 0 0 0.00079548 1 52655 86.539 70.783 1 2953 632 1505 1670 4791 4791 KAEDSDSEPEPEDNVR 16 1 1 2 Phospho (STY) _KAEDS(ph)DS(ph)EPEPEDNVR_ KAEDS(1)DS(1)EPEPEDNVR KAEDS(63.69)DS(63.69)EPEPEDNVR 0 0 2 1 B4E0B9;B4DZC3;B3KMC9;Q9H0D6 B4E0B9 B4E0B9 XRN2 5-3 exoribonuclease 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 988.8621 2 988.861547 1975.70854 60976.04 0.49845 0.00049289 -1.9043 -0.001883 -1.4058 -0.0013902 988.861872153637 997.872993370541 43.103 1.7773 43.103 42.096 43.874 0 662 131 9 0 0 0 2.7349E-05 2 15601 63.691 53.352 1 0.7069 0.78374 0 14255000 8209400 6045100 2954 572 1506 1671 4792;4793 4793 950;951 KAEDSDSEPEPEDNVR 16 1 1 2 Phospho (STY) _KAEDS(ph)DS(ph)EPEPEDNVR_ KAEDS(1)DS(1)EPEPEDNVR KAEDS(50.94)DS(50.94)EPEPEDNVR 0 0 2 1 B4E0B9;B4DZC3;B3KMC9;Q9H0D6 B4E0B9 B4E0B9 XRN2 5-3 exoribonuclease 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 989.3636 2 988.861547 1975.70854 61525.82 0.37716 0.00037296 0.40122 0.00039675 0.77838 0.00076971 988.861813594851 997.873232876122 30.085 0.49911 30.085 29.827 30.326 0 163 33 7 0 0 0 6.2519E-05 1 15575 50.944 45.284 1 0.81285 0.62175 0 23417000 11946000 11472000 2955 572 1506 1671 4794 4794 950;951 KAEEATEAQEVVEATPEGACTEPR 24 1 1 Phospho (STY) _KAEEATEAQEVVEAT(ph)PEGACTEPR_ KAEEAT(0.001)EAQEVVEAT(0.985)PEGACT(0.015)EPR KAEEAT(-31.95)EAQEVVEAT(18.23)PEGACT(-18.23)EPR 0 0 1 1 B3KNS8;O75683 B3KNS8 B3KNS8 SURF6 Surfeit locus protein 6 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 901.0671 3 894.724867 2681.15277 63714.25 1.1804 0.0010562 -0.49451 -0.00044245 0.68594 0.00061372 895.058952900183 900.732246563217 68.555 0.70772 68.555 68.211 68.919 0 574 64 13 0 0 0 1.8335E-06 1 42923 43.155 33.774 3 0.98344 0.75886 0 78834000 40429000 38404000 2956 588 1507 1672 4795 4795 2773 KAEEDPEAADSGEPQNKR 18 2 1 Unmodified _KAEEDPEAADSGEPQNKR_ 0 0 0 2 Q9NYB0 Q9NYB0 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 657.6401 3 657.639852 1969.89773 76472.51 0.80972 0.0005325 0.36569 0.0002405 1.1754 0.000773 657.974378325508 666.319464497339 64.934 0.26234 64.934 64.804 65.066 0 47 18 4 0 0 0 4.4113E-14 2 31085 100.97 100.97 1 1.9173 2.2406 0 21831000 7263300 14567000 2957 1224 1508 1673 4796;4797 4796 KAEGEPQEESPLK 13 2 0 Phospho (STY) _KAEGEPQEES(ph)PLK_ KAEGEPQEES(1)PLK KAEGEPQEES(115.38)PLK 0 0 1 1 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09;E9PJA7 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 761.3448 2 761.345261 1520.67597 69511.57 0.69913 0.00053228 -0.01302 -9.913E-06 0.68611 0.00052237 761.345265619955 769.359445642807 58.572 1.3846 58.572 58.069 59.454 3.8147E-06 750 110 9 0 0 0 8.8018E-15 4 25752 115.38 94.344 1 1.1568 1.5498 0 496790000 233760000 263030000 2958 809 1509 1674 4798;4799;4800;4801 4799 1389 KAEGEPQEESPLK 13 2 0 Phospho (STY) _KAEGEPQEES(ph)PLK_ KAEGEPQEES(1)PLK KAEGEPQEES(105.28)PLK 0 0 1 1 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09;E9PJA7 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 507.8989 3 507.899266 1520.67597 84495.06 0.22007 0.00011177 0.0080641 4.0957E-06 0.22814 0.00011587 507.899176010985 513.242055189839 58.545 1.1682 58.545 58.069 59.237 3.8147E-06 443 91 8 0 0 0 1.4388E-10 2 25842 105.28 105.28 1 1.2139 1.5564 0 104350000 48260000 56088000 2959 809 1509 1674 4802;4803 4803 1389 KAEGEPQEESPLK 13 2 0 Phospho (STY) _KAEGEPQEES(ph)PLK_ KAEGEPQEES(1)PLK KAEGEPQEES(125.61)PLK 0 0 1 1 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09;E9PJA7 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 761.3443 2 761.345261 1520.67597 68773.02 0.86756 0.00066051 -1.1479 -0.00087393 -0.28033 -0.00021343 761.34437139171 769.358634551935 24.929 1.2313 24.929 24.517 25.748 0 409 64 12 0 0 0 5.5941E-17 2 11150 125.61 96.62 1 1.1998 0.86731 0 1294900000 552190000 742710000 2960 809 1509 1674 4804;4805 4805 1389 KAEGEPQEESPLK 13 2 0 Phospho (STY) _KAEGEPQEES(ph)PLK_ KAEGEPQEES(1)PLK KAEGEPQEES(145.46)PLK 0 0 1 1 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09;E9PJA7 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 508.2339 3 507.899266 1520.67597 84595.55 0.40163 0.00020399 -0.027514 -1.3974E-05 0.37412 0.00019001 507.8993021073 513.242011317668 24.955 0.65803 24.955 24.683 25.341 0 215 32 10 0 0 0 9.3153E-27 2 11157 145.46 137.41 1 1.2837 0.95856 0 114540000 48600000 65938000 2961 809 1509 1674 4806;4807 4807 1389 KAEGGGGGGRPGAPAAGDGK 20 2 1 Unmodified _KAEGGGGGGRPGAPAAGDGK_ 0 0 0 2 Q96BA7;B3KX72;Q00839 Q96BA7 Q96BA7 HNRNPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 556.2817 3 556.280041 1665.81829 80072.45 0.69517 0.00038671 -0.12827 -7.1354E-05 0.5669 0.00031536 556.279921109327 564.958902754564 64.096 0.3134 64.096 63.986 64.299 0 39 20 3 0 0 0 0.019926 1 30492 17.146 9.7375 1 1.5236 1.7806 0 21908000 8139800 13768000 2962 610 1510 1675 4808 4808 KAEPSEVDMNSPK 13 2 0 Oxidation (M),Phospho (STY) _KAEPSEVDM(ox)NS(ph)PK_ KAEPSEVDM(1)NSPK KAEPS(0.012)EVDMNS(0.988)PK KAEPSEVDM(40.48)NSPK KAEPS(-19.23)EVDMNS(19.23)PK 0 1 1 1 Q9NR30;Q3SWU7 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 764.3235 2 764.323471 1526.63239 70029.66 0.8502 0.00064983 -0.21549 -0.0001647 0.63471 0.00048512 764.323480808194 772.337557931923 46.243 0.72329 46.243 45.88 46.603 0 234 55 5 0 0 0 0.015242 1 17483 40.477 34.094 2 0.55139 0.57863 0 7550800 4961200 2589700 2963 1214 1511 1676 4809 4809 343 2438 KAEPSEVDMNSPK 13 2 0 Phospho (STY) _KAEPSEVDMNS(ph)PK_ KAEPSEVDMNS(1)PK KAEPS(-53.49)EVDMNS(53.49)PK 0 0 1 1 Q9NR30;Q3SWU7 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 756.3274 2 756.326014 1510.63747 68267.09 0.88912 0.00067246 0.10506 7.9459E-05 0.99418 0.00075192 756.326359140983 764.340340096317 26.938 0.8064 26.938 26.602 27.408 0 352 49 11 0 0 0 1.2347E-16 3 13041 121.45 71.094 2 1.5201 1.1238 0 241210000 95659000 145560000 2964 1214 1511 1677 4810;4811;4812 4811 2438 KAEQGSEEEGEGEEEEEEGGESK 23 2 0 Unmodified _KAEQGSEEEGEGEEEEEEGGESK_ 0 0 0 1 Q5STZ8;B4DNU2;Q8NE71 Q5STZ8 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 828.0009 3 828.000168 2480.97867 68480.03 0.61527 0.00050944 0.35685 0.00029547 0.97212 0.00080491 828.334872511753 833.677652496477 50.891 0.8061 50.891 50.451 51.257 0 347 64 8 0 0 0 0.0072462 1 20415 21.647 18.206 1 1.2245 1.3311 0 12650000 4721400 7928900 2965 648 1512 1678 4813 4813 KAEQGSEEEGEGEEEEEEGGESK 23 2 0 Unmodified _KAEQGSEEEGEGEEEEEEGGESK_ 0 0 0 1 Q5STZ8;B4DNU2;Q8NE71 Q5STZ8 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 833.3433 3 828.000168 2480.97867 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.672 1 50.672 50.172 51.172 0 0 0 0 0.00034184 1 20498 46.839 36.51 1 2966 648 1512 1678 4814 4814 KAEQGSEEEGEGEEEEEEGGESK 23 2 0 Unmodified _KAEQGSEEEGEGEEEEEEGGESK_ 0 0 0 1 Q5STZ8;B4DNU2;Q8NE71 Q5STZ8 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 833.3435 3 828.000168 2480.97867 67631.2 0.80223 0.00066424 -0.0087227 -7.2224E-06 0.7935 0.00065702 828.000898251551 833.343002963427 15.979 0.1672 15.979 15.88 16.047 0 32 7 6 0 0 0 0.00098743 1 3431 28.091 28.091 1 0.85959 0.76107 0 3314900 1933400 1381500 2967 648 1512 1678 4815 4815 KAHLGTALK 9 2 0 Unmodified _KAHLGTALK_ 0 0 0 1 A8K517;P62266;D6RD47;D6RDJ2;D6RIX0;D6R9I7 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 477.8073 2 469.792727 937.5709 93515.02 0.34137 0.00016037 -0.20198 -9.4889E-05 0.13939 6.5483E-05 469.792594546863 477.806798397055 116.06 0.97758 116.06 115.66 116.64 -7.6294E-06 207 87 4 0 0 0 0.019494 1 69287 63.816 42.516 1 0.64746 0.67976 0 7601800 4448600 3153200 2968 469 1513 1679 4816 4816 KAHLGTALK 9 2 0 Unmodified _KAHLGTALK_ 0 0 0 1 A8K517;P62266;D6RD47;D6RDJ2;D6RIX0;D6R9I7 A8K517 A8K517 RPS23 40S ribosomal protein S23 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 313.5308 3 313.53091 937.5709 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.35 1 116.35 115.85 116.85 0 0 0 0 0.004126 1 69535 54.066 33.441 1 2969 469 1513 1679 4817 4817 KASGPPVSELITK 13 2 0 Phospho (STY) _KAS(ph)GPPVSELITK_ KAS(1)GPPVSELITK KAS(75.54)GPPVS(-75.54)ELIT(-144.26)K 0 0 1 1 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 711.883 2 703.868175 1405.7218 71831.74 1.1248 0.00079172 -0.042271 -2.9753E-05 1.0825 0.00076196 703.868444286268 711.882244138478 94.148 1.8696 94.148 93.594 95.463 -7.6294E-06 1136 154 11 0 0 0 3.5453E-111 6 52969 206.27 186.51 3 0.76679 1.0906 0 4160300000 2346300000 1814000000 2970 410;967 1514 1680 4818;4819;4820;4821;4822;4823 4821 702;703;1714;1715 KASGPPVSELITK 13 2 0 Phospho (STY) _KAS(ph)GPPVSELITK_ KAS(1)GPPVSELITK KAS(48.48)GPPVS(-48.48)ELIT(-64.95)K 0 0 1 1 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 469.5814 3 469.581209 1405.7218 87501.18 0.5241 0.00024611 0.14848 6.9724E-05 0.67258 0.00031583 469.581180542932 474.924025564798 94.16 0.97713 94.16 93.802 94.779 0 330 78 7 0 0 0 0.00076621 1 52514 66.893 60.415 3 0.77876 0.99479 0 91410000 49985000 41424000 2971 410;967 1514 1680 4824 4824 702;703;1714;1715 KASGPPVSELITK 13 2 0 Phospho (STY) _KAS(ph)GPPVSELITK_ KAS(0.999)GPPVS(0.001)ELITK KAS(28.33)GPPVS(-28.33)ELIT(-71.49)K 0 0 1 1 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 711.8828 2 703.868175 1405.7218 72461.84 0.9683 0.00068155 -0.16522 -0.00011629 0.80308 0.00056526 703.868306301711 711.882107225966 83.002 2.0555 83.002 82.432 84.487 -7.6294E-06 1290 189 11 0 0 0 1.3502E-06 4 53430 91.616 63.649 3 0.42169 0.30419 0 1510300000 1062400000 447920000 2972 410;967 1514 1680 4825;4826;4827;4828 4827 702;703;1714;1715 KASGPPVSELITK 13 2 0 2 Phospho (STY) _KAS(ph)GPPVS(ph)ELITK_ KAS(1)GPPVS(0.997)ELIT(0.003)K KAS(37.48)GPPVS(25.35)ELIT(-25.35)K 0 0 2 1 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 743.8513 2 743.85134 1485.68813 71967.26 1.2698 0.00094452 -0.5946 -0.00044229 0.67518 0.00050223 743.851019093244 751.865163116564 96.073 0.715 96.073 95.775 96.49 0 206 61 4 0 0 0 0.0017939 1 54186 45.458 32.054 3 0.54188 0.64923 0 27541000 18795000 8745900 2973 410;967 1514 1681 4829 4829 702;703;1714;1715 KASPPSGLWSPAYASH 16 1 0 Phospho (STY) _KAS(ph)PPSGLWSPAYASH_ KAS(0.788)PPS(0.196)GLWS(0.016)PAYASH KAS(6.05)PPS(-6.05)GLWS(-17)PAY(-32.68)AS(-47.3)H 0 0 1 1 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 868.8998 2 868.395619 1734.77669 NaN NaN NaN 0.65612 0.00056977 NaN NaN NaN NaN 99.63 0.87105 99.63 99.136 100.01 -7.6294E-06 0 0 0 0.00010451 2 56771 55.401 41.738 5 NaN NaN 0 15982000 15982000 0 2974 1164 1515 1682 4830;4831 4831 2248 KDDEVQVVR 9 1 1 Unmodified _KDDEVQVVR_ 0 0 0 1 E5RIT6;Q9UNX3;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;Q6IBH6;P61254;J3KTJ8;A0A024RBF6 E5RIT6;J3QRI7 J3QRI7 RPL26L1;RPL26;hCG_26523 60S ribosomal protein L26-like 1;60S ribosomal protein L26 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 544.2926 2 544.290745 1086.56694 82206.31 0.64056 0.00034865 -0.04413 -2.402E-05 0.59643 0.00032463 544.290658510864 553.301899847815 76.34 0.66702 76.34 75.971 76.638 0 218 58 5 0 0 0 0.0040689 1 39362 72.643 59.265 1 0.70731 0.842 0 78794000 45716000 33078000 2975 786;896 1516 1683 4832 4832 KDDFLGAAEGK 11 2 0 Unmodified _KDDFLGAAEGK_ 0 0 0 1 E9PEI0;Q69YH5;A8K8Z0;B3KRS8 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 575.7919 2 575.790578 1149.5666 NaN NaN NaN 0.31949 0.00018396 NaN NaN NaN NaN 95.384 0.40925 95.384 95.175 95.584 0 0 0 0 0.0048026 2 53668 62.633 44.371 1 NaN NaN 0 9911100 9911100 0 2976 799 1517 1684 4833;4834 4833 KDDINLLPSK 10 2 0 Unmodified _KDDINLLPSK_ 0 0 0 1 B3KM90;Q643R0;Q9ULW0 B3KM90 B3KM90 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 579.8391 2 571.824421 1141.63429 80936.99 0.5477 0.00031319 0.18465 0.00010559 0.73235 0.00041878 571.824348812049 579.838455607733 106.75 0.92185 106.75 106.37 107.29 -7.6294E-06 274 73 5 0 0 0 8.7973E-06 2 62043 103.26 89.048 1 0.68807 0.82237 0 26990000 15321000 11669000 2977 571 1518 1685 4835;4836 4835 KDEDLFR 7 1 1 Unmodified _KDEDLFR_ 0 0 0 1 A0A024R5H0;O75531;B2R4V4 A0A024R5H0 A0A024R5H0 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 461.735 2 461.735074 921.455596 88011.55 0.65154 0.00030084 -0.37642 -0.0001738 0.27512 0.00012703 461.734985513407 470.746084503176 95.931 2.0876 95.931 95.474 97.562 0 778 180 9 0 0 0 5.2442E-43 2 53928 178.84 61.143 1 0.85708 1.0667 0 2412100000 1290900000 1121200000 2978 107 1519 1686 4837;4838 4837 KDEIENSIVHR 11 1 1 Unmodified _KDEIENSIVHR_ 0 0 0 1 B4DSL9;B3KQ21;Q9NYH9;B7Z9G4 B4DSL9 B4DSL9 UTP6 U3 small nucleolar RNA-associated protein 6 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 447.2368 3 447.237002 1338.68918 90479.27 0.21397 9.5697E-05 -0.22766 -0.00010182 -0.013685 -6.1203E-06 447.236834160642 453.244434442998 106.64 1.9113 106.64 105.7 107.61 0 476 145 5 0 0 0 8.9886E-05 2 62226 88.338 88.338 1 0.88114 1.0242 0 30054000 18245000 11809000 2979 591 1520 1687 4839;4840 4839 KEDALLYQSK 10 2 0 Unmodified _KEDALLYQSK_ 0 0 0 1 P50402;Q5HY57 P50402 P50402 EMD Emerin MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 597.8227 2 597.821878 1193.6292 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.834 1 86.834 86.334 87.334 0 0 0 0 0.00020173 1 47121 117.25 63.757 1 2980 1002 1521 1688 4841 4841 KEDGFEDGVEDNK 13 2 0 Unmodified _KEDGFEDGVEDNK_ 0 0 0 1 Q14191 Q14191 Q14191 WRN Werner syndrome ATP-dependent helicase MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 741.3239 2 741.323167 1480.63178 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.12 1 73.12 72.62 73.62 0 0 0 0 0.033866 1 37181 43.544 23.554 1 2981 1055 1522 1689 4842 4842 KEDINLSVR 9 1 1 Unmodified _KEDINLSVR_ 0 0 0 1 H0YAL2;Q15645 H0YAL2 H0YAL2 TRIP13 Pachytene checkpoint protein 2 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 537.3018 2 537.301113 1072.58767 84424.16 0.93327 0.00050145 0.58774 0.00031579 1.521 0.00081724 537.301339762684 546.312668254072 93.489 0.45608 93.489 93.216 93.672 -7.6294E-06 89 36 4 0 0 0 0.0041319 2 52177 72.607 49.536 1 1.7757 2.0632 0 29696000 8661900 21034000 2982 855 1523 1690 4843;4844 4844 KEDLEFQAK 9 2 0 Unmodified _KEDLEFQAK_ 0 0 0 1 X5DRB1;A8K146;A0A024R2M8;Q01831;D9I4E1;D2CPJ3;D2CPJ1;D2CPI8 X5DRB1;D2CPI8 X5DRB1 XPC DNA repair protein complementing XP-C cells MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 562.3019 2 554.287671 1106.56079 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.207 1 82.207 81.707 82.707 0 0 0 0 0.0042471 1 43897 79.489 44.133 1 2983 66;763 1524 1691 4845 4845 KEEASSPGAGEGPAEEGTR 19 1 1 Phospho (STY) _KEEAS(ph)SPGAGEGPAEEGTR_ KEEAS(0.5)S(0.5)PGAGEGPAEEGTR KEEAS(0)S(0)PGAGEGPAEEGT(-48.54)R 0 0 1 1 J3KPS2;Q6ZRV2 J3KPS2 J3KPS2 FAM83H Protein FAM83H MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 646.9415 3 646.940741 1937.80039 76225.74 0.89185 0.00057697 -0.35064 -0.00022684 0.54121 0.00035013 646.940681063292 652.948146418876 45.41 0.86615 45.41 44.976 45.843 0 371 61 9 0 0 0 1.5652E-05 2 16947 49.188 41 3 0.83419 0.91641 0 11630000 6283700 5345900 2984 890 1525 1692 4846;4847 4846 1511;1512 KEEELQAALAR 11 1 1 Unmodified _KEEELQAALAR_ 0 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529;Q7Z7R0;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;A0A0C4DFM8;Q7Z406 A0A024R1N1 A0A024R1N1 MYH9;MYH11;MYH14 Myosin-9;Myosin-11;Myosin-14 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 425.9057 3 419.898098 1256.67246 NaN NaN NaN 0.84623 0.00035533 NaN NaN NaN NaN 95.551 0.31478 95.551 95.423 95.738 0 0 0 0 0.0010169 1 53701 67.93 52.391 1 NaN NaN 0 11953000 0 11953000 2985 49 1526 1693 4848 4848 KEEELQAALAR 11 1 1 Unmodified _KEEELQAALAR_ 0 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529;Q7Z7R0;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;A0A0C4DFM8;Q7Z406 A0A024R1N1 A0A024R1N1 MYH9;MYH11;MYH14 Myosin-9;Myosin-11;Myosin-14 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 419.8986 3 419.898098 1256.67246 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.564 1 95.564 95.064 96.064 -7.6294E-06 0 0 0 0.010197 1 53708 44.612 29.712 1 2986 49 1526 1693 4849 4849 KEELTLEGIR 10 1 1 Unmodified _KEELTLEGIR_ 0 0 0 1 B4DNH2;J3KSZ0;J3KT12;A8K7F6;A8K088;P60842;J3KTN0;B4DKP9;J3QS69;Q59F68;J3KTB5 B4DNH2 B4DNH2 EIF4A1 Eukaryotic initiation factor 4A-I MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 603.3478 2 594.335153 1186.65575 80204.95 0.62962 0.0003742 0.25781 0.00015323 0.88743 0.00052743 594.335435880151 603.346541570676 111.69 1.1484 111.69 110.84 111.99 0 333 99 6 0 0 0 1.3863E-07 4 65968 127.76 110.54 1 2.0022 2.3784 0 66980000 22871000 44109000 2987 439 1527 1694 4850;4851;4852;4853 4850 KEESEESDDDMGFGLF 16 1 0 Oxidation (M),2 Phospho (STY) _KEES(ph)EES(ph)DDDM(ox)GFGLF_ KEESEESDDDM(1)GFGLF KEES(1)EES(1)DDDMGFGLF KEESEESDDDM(56.34)GFGLF KEES(56.34)EES(56.34)DDDMGFGLF 0 1 2 1 Q7Z612 Q7Z612 Q7Z612 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1005.8346 2 1005.83361 2009.65267 NaN NaN NaN NaN NaN NaN NaN NaN NaN 130.99 1 130.99 130.49 131.49 0 0 0 0 6.3491E-05 1 79681 56.339 46.417 1 2988 1138 1528 1695 4854 4854 322 2182;2183 KEESEESDDDMGFGLFD 17 1 0 Oxidation (M),Phospho (STY) _KEES(ph)EESDDDM(ox)GFGLFD_ KEESEESDDDM(1)GFGLFD KEES(0.744)EES(0.256)DDDMGFGLFD KEESEESDDDM(56.82)GFGLFD KEES(4.64)EES(-4.64)DDDMGFGLFD 0 1 1 1 A0A024RCA7;P05387;H0YDD8;Q6ICQ4;Q6FG99;A0A024R608;P05386 A0A024RCA7 A0A024RCA7 RPLP2;RPLP1 60S acidic ribosomal protein P2;60S acidic ribosomal protein P1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1027.3708 2 1023.36392 2044.71328 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.94 1 116.94 116.44 117.44 0 0 0 0 0.00018879 1 69979 56.817 43.836 2 2989 208 1529 1696 4855 4855 49 321 KEFSAENVTFWK 12 2 0 Phospho (STY) _KEFSAENVT(ph)FWK_ KEFS(0.006)AENVT(0.994)FWK KEFS(-22.07)AENVT(22.07)FWK 0 0 1 1 A0A024R7N4;O43566 A0A024R7N4 A0A024R7N4 RGS14 Regulator of G-protein signaling 14 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 783.3555 2 783.355432 1564.69631 NaN NaN NaN -1.2763 -0.00099976 NaN NaN NaN NaN 79.093 0.046638 79.093 79.052 79.099 0 0 0 0 0.012834 1 41605 44.299 20.55 2 NaN NaN 0 6561400 6561400 0 2990 138 1530 1697 4856 4856 2644 KEKTPELPEPSVK 13 3 0 Phospho (STY) _KEKT(ph)PELPEPSVK_ KEKT(1)PELPEPSVK KEKT(106.97)PELPEPS(-106.97)VK 0 0 1 2 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3;E9PCT1;M0R088;B4DED5 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 521.2674 3 521.26729 1560.78004 83825.24 0.9935 0.00051788 -0.43301 -0.00022572 0.56049 0.00029217 521.267057643254 529.281188116618 58.775 1.7781 58.775 58.085 59.863 0 717 167 8 0 0 0 1.1244E-20 1 36393 131.25 110.79 2 0.48828 0.43378 0 51824000 33366000 18458000 2991 353 1531 1698 4857 4857 2692 KEPLYVGVDDDK 12 2 0 Unmodified _KEPLYVGVDDDK_ 0 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;H7C452;Q59FR7 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 689.3476 2 689.348457 1376.68236 73712.17 0.88274 0.00060852 -0.24289 -0.00016744 0.63985 0.00044108 689.348116811177 697.362676281836 94.998 0.55833 94.998 94.766 95.325 -7.6294E-06 179 46 5 0 0 0 1.3104E-05 2 53184 96.82 59.476 1 0.96575 1.2206 0 62656000 34682000 27974000 2992 182 1532 1699 4858;4859 4858 KESESEDSSDDEPLIK 16 2 0 2 Phospho (STY) _KESES(ph)EDS(ph)SDDEPLIK_ KES(0.305)ES(0.682)EDS(0.557)S(0.456)DDEPLIK KES(-3.57)ES(3.57)EDS(0.92)S(-0.92)DDEPLIK 0 0 2 1 B4DFG0;P35659;H0Y993;B4DNW3 B4DFG0 B4DFG0 DEK Protein DEK MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 984.8757 2 984.373956 1966.73336 63690.95 0.14084 0.00013864 0.10393 0.00010231 0.24477 0.00024095 984.374399137126 992.889055542864 68.549 0.96096 68.549 68.104 69.065 0 228 91 5 0 0 0 1.9428E-05 1 34256 66.387 56.434 6 0.53482 0.64936 0 30735000 19615000 11120000 2993 619 1533 1700 4860 4860 1021;1022;1023;1024 KESESEDSSDDEPLIK 16 2 0 2 Phospho (STY) _KESESEDS(ph)S(ph)DDEPLIK_ KESESEDS(1)S(1)DDEPLIK KES(-92.77)ES(-57.16)EDS(57.16)S(75.96)DDEPLIK 0 0 2 1 B4DFG0;P35659;H0Y993;B4DNW3 B4DFG0 B4DFG0 DEK Protein DEK MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 984.3749 2 984.373956 1966.73336 60867.55 0.34406 0.00033869 0.16061 0.0001581 0.50467 0.00049679 984.37400443022 992.388479589643 71.167 1.871 71.167 70.265 72.136 0 917 177 9 0 0 0 1.1455E-246 3 35693 251.35 230.32 6 0.80191 1.0405 0 159550000 90287000 69258000 2994 619 1533 1700 4861;4862;4863 4861 1021;1022;1023;1024 KESESEDSSDDEPLIK 16 2 0 2 Phospho (STY) _KESESEDS(ph)S(ph)DDEPLIK_ KES(0.261)ES(0.295)EDS(0.763)S(0.681)DDEPLIK KES(-6.64)ES(-6.64)EDS(6.64)S(6.64)DDEPLIK 0 0 2 1 B4DFG0;P35659;H0Y993;B4DNW3 B4DFG0 B4DFG0 DEK Protein DEK MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 984.3751 2 984.373956 1966.73336 61720.32 0.40762 0.00040125 0.12904 0.00012702 0.53666 0.00052828 984.374087574041 992.388192067981 61.575 2.7658 61.575 60.611 63.377 -3.8147E-06 1823 259 9 0 0 0 3.726E-05 2 38298 55.688 43.061 6 0.89219 0.66106 0 204410000 99641000 104770000 2995 619 1533 1700 4864;4865 4864 1021;1022;1023;1024 KESESEDSSDDEPLIK 16 2 0 Phospho (STY) _KESESEDS(ph)SDDEPLIK_ KES(0.003)ES(0.002)EDS(0.497)S(0.497)DDEPLIK KES(-22.18)ES(-23.62)EDS(0)S(0)DDEPLIK 0 0 1 1 B4DFG0;P35659;H0Y993;B4DNW3 B4DFG0 B4DFG0 DEK Protein DEK MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 952.4048 2 944.39079 1886.76703 63004.64 0.68283 0.00064486 -0.10904 -0.00010298 0.57379 0.00054188 944.3912229183 952.405062727187 46.864 2.1209 46.864 45.895 48.016 0 990 198 9 0 0 0 1.7017E-05 1 28246 69.069 50.237 4 1.199 0.93396 0 38902000 15962000 22940000 2996 619 1533 1701 4866 4866 1021;1022;1023;1024 KESESEDSSDDEPLIK 16 2 0 3 Phospho (STY) _KES(ph)ESEDS(ph)S(ph)DDEPLIK_ KES(0.531)ES(0.531)EDS(0.97)S(0.967)DDEPLIK KES(0)ES(0)EDS(11.96)S(11.53)DDEPLIK 0 0 3 1 B4DFG0;P35659;H0Y993;B4DNW3 B4DFG0 B4DFG0 DEK Protein DEK MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1032.3723 2 1024.35712 2046.69969 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.261 1 77.261 76.761 77.761 0 0 0 0 0.0014911 1 49311 42.068 31.013 4 2997 619 1533 1702 4867 4867 1021;1022;1023;1024 KESESEDSSDDEPLIK 16 2 0 3 Phospho (STY) _KES(ph)ES(ph)EDS(ph)SDDEPLIK_ KES(0.994)ES(0.99)EDS(0.544)S(0.472)DDEPLIK KES(19.24)ES(17.31)EDS(0.63)S(-0.63)DDEPLIK 0 0 3 1 B4DFG0;P35659;H0Y993;B4DNW3 B4DFG0 B4DFG0 DEK Protein DEK MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1032.3717 2 1024.35712 2046.69969 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.456 1 79.456 78.956 79.956 0 0 0 0 0.0006039 1 50817 44.577 38.544 4 2998 619 1533 1702 4868 4868 1021;1022;1023;1024 KESYSIYVYK 10 2 0 Unmodified _KESYSIYVYK_ 0 0 0 1 A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257;Q6DRA6;Q6DN03 A0A024RCJ2 A0A024RCJ2 HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 640.8344 2 640.332079 1278.6496 77206.94 1.0402 0.00066605 0.061345 3.9281E-05 1.1015 0.00070533 640.332008027722 648.346411764723 108.04 0.91417 108.04 107.52 108.43 0 195 68 6 0 0 0 1.844E-05 2 63120 99.815 76.047 1 1.0449 1.2482 0 26867000 13066000 13801000 2999 211 1534 1703 4869;4870 4869 KESYSIYVYK 10 2 0 Unmodified _KESYSIYVYK_ 0 0 0 1 A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257;Q6DRA6;Q6DN03 A0A024RCJ2 A0A024RCJ2 HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 640.8345 2 640.332079 1278.6496 NaN NaN NaN 0.11223 7.1867E-05 NaN NaN NaN NaN 108.31 0.23241 108.31 108.22 108.45 0 0 0 0 0.009272 1 63437 60.398 19.674 1 NaN NaN 0 6139500 6139500 0 3000 211 1534 1703 4871 4871 KESYSVYVYK 10 2 0 Unmodified _KESYSVYVYK_ 0 0 0 1 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;P57053 B2R4S9 B2R4S9 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 633.3246 2 633.324254 1264.63395 77923.74 1.5105 0.00095666 0.069314 4.3898E-05 1.5799 0.0010006 633.324200792957 641.338345289414 101.07 1.1675 101.07 100.22 101.39 0 439 89 7 0 0 0 5.8301E-30 3 58103 163.16 111.81 1 0.63821 0.8175 0 100800000 62914000 37884000 3001 21 1535 1704 4872;4873;4874 4874 KESYSVYVYK 10 2 0 Phospho (STY) _KES(ph)YSVYVYK_ KES(0.927)Y(0.002)S(0.07)VYVYK KES(11.22)Y(-25.82)S(-11.22)VY(-38.5)VY(-59.71)K 0 0 1 1 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;P57053 B2R4S9 B2R4S9 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 673.3073 2 673.307419 1344.60028 73639.98 1.0492 0.00070641 -0.050899 -3.4271E-05 0.99826 0.00067214 673.307186253855 681.320542702575 69.411 0.51223 69.411 69.181 69.693 0 177 41 6 0 0 0 0.0018953 1 43674 68.171 48.856 5 0.84055 0.65873 0 8532200 4906700 3625500 3002 21 1535 1705 4875 4875 29 KETESEAEDNLDDLEK 16 2 0 2 Phospho (STY) _KET(ph)ES(ph)EAEDNLDDLEK_ KET(1)ES(1)EAEDNLDDLEK KET(106.93)ES(106.93)EAEDNLDDLEK 0 0 2 1 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1021.4006 2 1012.88469 2023.75482 61605.4 0.38186 0.00038678 0.56019 0.00056741 0.94205 0.00095419 1012.88459142638 1020.89976194546 80.641 1.0543 80.641 80.038 81.092 0 349 96 6 0 0 0 1.0031E-16 2 42790 106.93 90.676 1 1.3062 1.6325 0 42119000 22450000 19670000 3003 353 1536 1706 4876;4877 4877 551;2694 KETESEAEDNLDDLEK 16 2 0 2 Phospho (STY) _KET(ph)ES(ph)EAEDNLDDLEK_ KET(1)ES(1)EAEDNLDDLEK KET(56.82)ES(56.82)EAEDNLDDLEK 0 0 2 1 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1020.9001 2 1012.88469 2023.75482 61551.43 0.24336 0.0002465 0.34366 0.00034808 0.58701 0.00059458 1012.88499231953 1020.899263474 83.201 0.57739 83.201 82.924 83.502 0 302 54 7 0 0 0 4.0457E-05 1 53346 56.819 48.409 1 0.38127 0.29029 0 50025000 35976000 14049000 3004 353 1536 1706 4878 4878 551;2694 KETESEAEDNLDDLEK 16 2 0 Phospho (STY) _KETES(ph)EAEDNLDDLEK_ KET(0.237)ES(0.763)EAEDNLDDLEK KET(-5.07)ES(5.07)EAEDNLDDLEK 0 0 1 1 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 980.9156 2 972.901522 1943.78849 NaN NaN NaN 2.7666 0.0026917 NaN NaN NaN NaN 81.654 0.66547 81.654 81.08 81.746 0 0 0 0 4.5961E-06 1 43147 65.231 46.606 2 NaN NaN 0 33719000 0 33719000 3005 353 1536 1707 4879 4879 551;2694 KETESEAEDNLDDLEK 16 2 0 Phospho (STY) _KETES(ph)EAEDNLDDLEK_ KET(0.005)ES(0.995)EAEDNLDDLEK KET(-23.36)ES(23.36)EAEDNLDDLEK 0 0 1 1 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 973.4038 2 972.901522 1943.78849 NaN NaN NaN -0.1649 -0.00016043 NaN NaN NaN NaN 81.558 1.3592 81.558 80.825 82.184 0 0 0 0 7.2409E-30 1 43531 118.24 94.048 2 NaN NaN 0 28867000 28867000 0 3006 353 1536 1707 4880 4880 551;2694 KETESEAEDNLDDLEK 16 2 0 Unmodified _KETESEAEDNLDDLEK_ 0 0 0 1 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 627.6249 3 622.28133 1863.82216 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.488 1 91.488 90.988 91.988 0 0 0 0 0.00026204 1 50551 56.215 45.876 1 3007 353 1536 1708 4881 4881 KETVNSPAIYK 11 2 0 Phospho (STY) _KETVNS(ph)PAIYK_ KET(0.001)VNS(0.999)PAIYK KET(-32.09)VNS(32.09)PAIY(-85.04)K 0 0 1 1 Q9Y3A2 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 673.3405 2 665.326143 1328.63773 76733.33 0.65558 0.00043617 -0.10846 -7.2164E-05 0.54711 0.00036401 665.32638206046 673.340110782248 65.991 0.62719 65.991 65.872 66.5 0 113 47 6 0 0 0 2.2781E-14 2 31961 133.48 86.597 3 0.64995 0.80136 0 34880000 19919000 14961000 3008 1249 1537 1709 4882;4883 4883 2573 KETVNSPAIYK 11 2 0 Phospho (STY) _KETVNS(ph)PAIYK_ KET(0.039)VNS(0.961)PAIYK KET(-13.95)VNS(13.95)PAIY(-36.64)K 0 0 1 1 Q9Y3A2 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 673.3406 2 665.326143 1328.63773 75009.23 0.99391 0.00066127 0.022344 1.4866E-05 1.0163 0.00067614 665.326142865449 673.340205086323 35.573 0.77136 35.573 35.145 35.916 0 318 62 8 0 0 0 0.0046835 1 19861 51.092 37.688 3 0.74504 0.59315 0 30671000 16110000 14561000 3009 1249 1537 1709 4884 4884 2573 KFDQLLAEEK 10 2 0 Unmodified _KFDQLLAEEK_ 0 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q7Z7R0;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;A0A0C4DFM8;P35580;Q7Z406;Q68D89;O14729;O14794;B4E177;A1L2Z2 A0A024R1N1 A0A024R1N1 MYH9;MYH11;MYH14;MYH10;DKFZp686D10126 Myosin-9;Myosin-11;Myosin-10;Myosin-14 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 610.8304 2 610.829703 1219.64485 78057.27 0.70376 0.00042988 0.074824 4.5705E-05 0.77858 0.00047558 610.829665714157 618.843816871167 106.59 1.2574 106.59 105.76 107.02 0 385 93 6 0 0 0 8.9968E-40 4 61616 167.12 93.45 1 1.7682 2.1789 0 34733000 12242000 22490000 3010 49 1538 1710 4885;4886;4887;4888 4885 KFELLPTPPLSPSR 14 1 1 2 Phospho (STY) _KFELLPT(ph)PPLS(ph)PSR_ KFELLPT(0.999)PPLS(0.962)PS(0.039)R KFELLPT(29.58)PPLS(14)PS(-14)R 0 0 2 1 H0YBG3;B3CJD8;B3CJD2;B3CJB9;B3CJB2;B3CJB0;B3CJA9;B3CJA3;B3CJ74;B3CJ73;B3CJ66;B3CJ65;B3CJ63;A0A0B4J1R1;B3CJD3;B3CJD1;B3CJC0;B3CJB8;B3CJB1;B3CJA1;B3CJ82;B3CJ64;B4E1N7;A0A024R9L7;H0YBT0;A0A087WUS5;P01106;B3CJ92;B3CJ91;B4DRZ1;P04198 H0YBG3 H0YBG3 MYC;MYCN Myc proto-oncogene protein;N-myc proto-oncogene protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 871.4205 2 871.419921 1740.82529 65895.86 0.78794 0.00068663 0.31264 0.00027244 1.1006 0.00095907 871.42015514413 880.431219264544 130.05 1.2187 130.05 129.46 130.67 0 632 112 8 0 0 0 1.5142E-05 3 79198 80.387 55.451 3 0.39798 0.4666 0 37942000 26527000 11415000 3011 169 1539 1711 4889;4890;4891 4890 264;2650 KGAAEEAELEDSDDEEK 17 2 0 Phospho (STY) _KGAAEEAELEDS(ph)DDEEK_ KGAAEEAELEDS(1)DDEEK KGAAEEAELEDS(90.39)DDEEK 0 0 1 1 F6XM96;B4DSX8;A0A024R1I7;Q9UBB9 F6XM96 F6XM96 TFIP11 Tuftelin-interacting protein 11 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 980.8995 2 972.88333 1943.75211 NaN NaN NaN 0.46278 0.00045023 NaN NaN NaN NaN 60.428 0.32333 60.428 60.277 60.6 -3.8147E-06 0 0 0 1.5528E-10 1 27442 90.385 76.15 1 NaN NaN 0 8938700 0 8938700 3012 45 1540 1712 4892 4892 54 KGAGDGSDEEVDGKADGAEAKPAE 24 3 0 Phospho (STY) _KGAGDGS(ph)DEEVDGKADGAEAKPAE_ KGAGDGS(1)DEEVDGKADGAEAKPAE KGAGDGS(41.6)DEEVDGKADGAEAKPAE 0 0 1 3 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 803.0172 3 795.002617 2381.98602 NaN NaN NaN 0.86824 0.00069025 NaN NaN NaN NaN 22.664 0.54262 22.664 22.506 23.049 0 0 0 0 0.00011414 1 9271 41.601 29.046 1 NaN NaN 0 9965500 0 9965500 3013 49 1541 1713 4893 4893 59 KGDECELLGHSK 12 2 0 Unmodified _KGDECELLGHSK_ 0 0 0 1 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 458.2222 3 458.222364 1371.64526 90677.7 0.3718 0.00017036 0.17051 7.8129E-05 0.5423 0.00024849 458.222655565011 463.565288626869 98.04 0.65891 98.04 97.584 98.243 0 175 53 6 0 0 0 0.015153 1 55421 29.981 24.033 1 1.8177 2.1853 0 28338000 7761600 20577000 3014 998 1542 1714 4894 4894 KGDECELLGHSK 12 2 0 Unmodified _KGDECELLGHSK_ 0 0 0 1 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 458.2227 3 458.222364 1371.64526 90677.63 0.16342 7.4881E-05 -0.64857 -0.00029719 -0.48516 -0.00022231 458.222095860112 463.564785965305 98.57 1.2938 98.57 98.146 99.44 0 200 109 4 0 0 0 0.0058848 1 56145 40.941 32.837 1 1.8745 2.3255 0 36710000 13340000 23370000 3015 998 1542 1714 4895 4895 KGDECELLGHSK 12 2 0 Unmodified _KGDECELLGHSK_ 0 0 0 1 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 463.5648 3 458.222364 1371.64526 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.11 1 99.11 98.61 99.61 0 0 0 0 0.0035697 1 56453 50.088 37.82 1 3016 998 1542 1714 4896 4896 KGDEVDGVDEVAK 13 2 0 Unmodified _KGDEVDGVDEVAK_ 0 0 0 1 B2R5W3;A0A024R3T8;P09874;B4E0E1;Q05D33;Q6PJL0;Q96P95 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 680.8354 2 680.833171 1359.65179 73716.98 0.69436 0.00047274 0.11821 8.0481E-05 0.81256 0.00055322 680.833039627758 688.847580604601 77.292 0.4696 77.292 77.085 77.554 0 156 41 5 0 0 0 1.7829E-19 2 40177 129.37 101.16 1 0.55392 0.67919 0 33327000 19319000 14008000 3017 81 1543 1715 4897;4898 4898 KGDGGGASGGGGGGGGSGGGGSGGGGGGGSSRPPAPQENTTSEAGLPQGEAR 52 1 2 Unmodified _KGDGGGASGGGGGGGGSGGGGSGGGGGGGSSRPPAPQENTTSEAGLPQGEAR_ 0 0 0 2 A8K4T9;Q53GL6 A8K4T9 A8K4T9 RALY MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1074.989 4 1067.47984 4265.89025 58013.51 0.1872 0.00019983 0.14012 0.00014958 0.32732 0.00034941 1067.98130161201 1074.98977371155 71.858 0.7767 71.858 71.359 72.136 -7.6294E-06 566 70 11 0 0 0 1.0254E-48 6 36181 76.822 68.131 1 0.83995 0.98982 0 167200000 92616000 74580000 3018 465 1544 1716 4899;4900;4901;4902;4903;4904 4903 KGDIDNVKSPEETEK 15 3 0 Phospho (STY) _KGDIDNVKS(ph)PEETEK_ KGDIDNVKS(1)PEETEK KGDIDNVKS(33.84)PEET(-33.84)EK 0 0 1 2 E7ETD6;Q12830;F5GXF5;A0A0A0MR81;B4DDK2;B4DM40 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 884.9006 2 884.903671 1767.79279 65876.69 0.69522 0.0006152 -0.33796 -0.00029906 0.35726 0.00031614 885.40480111211 896.924600083955 65.042 0.23734 65.042 64.924 65.161 0 64 16 6 0 0 0 0.00043747 2 31151 60.209 55.011 2 0.60623 0.76781 0 25259000 15337000 9921400 3019 791 1545 1717 4905;4906 4905 1336 KGDIDNVKSPEETEK 15 3 0 Phospho (STY) _KGDIDNVKS(ph)PEETEK_ KGDIDNVKS(1)PEETEK KGDIDNVKS(51.46)PEET(-51.46)EK 0 0 1 2 E7ETD6;Q12830;F5GXF5;A0A0A0MR81;B4DDK2;B4DM40 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 598.286 3 590.27154 1767.79279 77757.62 0.61225 0.00036139 -0.29331 -0.00017313 0.31893 0.00018826 590.271416997278 598.285565271045 65.05 0.61998 65.05 64.706 65.326 0 211 42 10 0 0 0 3.04E-90 2 31157 192.09 192.09 2 0.65488 0.82942 0 332770000 199070000 133700000 3020 791 1545 1717 4907;4908 4907 1336 KGDIDNVKSPEETEK 15 3 0 Phospho (STY) _KGDIDNVKS(ph)PEETEK_ KGDIDNVKS(1)PEETEK KGDIDNVKS(50.41)PEET(-50.41)EK 0 0 1 2 E7ETD6;Q12830;F5GXF5;A0A0A0MR81;B4DDK2;B4DM40 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 590.6063 3 590.27154 1767.79279 77974.98 0.67908 0.00040084 0.31774 0.00018755 0.99683 0.0005884 590.272179998798 598.286093329245 20.095 1.271 20.095 19.821 21.092 0 398 60 13 0 0 0 1.7824E-51 1 6932 157.28 134.45 2 1.8967 1.6033 0 782860000 269720000 513130000 3021 791 1545 1717 4909 4909 1336 KGDIDNVKSPEETEK 15 3 0 Phospho (STY) _KGDIDNVKS(ph)PEETEK_ KGDIDNVKS(1)PEETEK KGDIDNVKS(46.05)PEET(-46.05)EK 0 0 1 2 E7ETD6;Q12830;F5GXF5;A0A0A0MR81;B4DDK2;B4DM40 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 884.9043 2 884.903671 1767.79279 64365.89 0.78562 0.0006952 0.45602 0.00040354 1.2416 0.0010987 884.904205237269 896.925372340717 20.101 0.62029 20.101 19.919 20.539 0 199 30 10 0 0 0 2.5623E-13 1 6963 108.75 108.75 2 1.9867 1.7169 0 234000000 84554000 149450000 3022 791 1545 1717 4910 4910 1336 KGEFQEVVR 9 1 1 Unmodified _KGEFQEVVR_ 0 0 0 1 B4DY59;E9PF19;B4DY50;Q96E41;A0A0S2Z5F3;Q8N2L6;B2RB52;Q9Y4P3 B4DY59 B4DY59 TBL2 Transducin beta-like protein 2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 546.297 2 546.29583 1090.57711 NaN NaN NaN 0.13126 7.1706E-05 NaN NaN NaN NaN 92.476 0.53871 92.476 92.237 92.776 0 0 0 0 0.006923 1 51232 61.65 28.809 1 NaN NaN 0 9981800 9981800 0 3023 360 1546 1718 4911 4911 KGESGQSWPR 10 1 1 Unmodified _KGESGQSWPR_ 0 0 0 1 B4DDC6;A0A024RB32;A0A087WYT3;B3KUY2;Q15185 B4DDC6 B4DDC6 PTGES3 Prostaglandin E synthase 3 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 575.2923 2 566.280712 1130.54687 NaN NaN NaN 0.028819 1.632E-05 NaN NaN NaN NaN 76.19 0.78603 76.19 75.707 76.493 0 0 0 0 0.016574 2 39296 48.028 27.468 1 NaN NaN 0 12169000 0 12169000 3024 191 1547 1719 4912;4913 4913 KGGEFDEFVNDDTDDDLPISK 21 2 0 Phospho (STY) _KGGEFDEFVNDDT(ph)DDDLPISK_ KGGEFDEFVNDDT(1)DDDLPISK KGGEFDEFVNDDT(44.02)DDDLPIS(-44.02)K 0 0 1 1 A8K6X9;Q6PD62 A8K6X9 A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 813.0115 3 812.67573 2435.00536 66658.91 0.91762 0.00074573 -0.086281 -7.0119E-05 0.83134 0.00067561 813.009971976472 818.352702256053 116.42 2.4924 116.42 115.22 117.72 0 1690 221 11 0 0 0 2.6888E-19 4 70014 86.732 82.463 2 1.6446 2.1765 0 322180000 125320000 196860000 3025 486 1548 1720 4914;4915;4916;4917 4917 2749 KGHAVGDIPGVR 12 1 1 Unmodified _KGHAVGDIPGVR_ 0 0 0 1 A8K517;P62266;D6RD47 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 402.5631 3 402.563161 1204.66765 92641.48 -0.34224 -0.00013777 0.11511 4.6338E-05 -0.22713 -9.1434E-05 402.563204333359 408.570585849804 132.66 2.0232 132.66 131.62 133.64 0 729 159 6 0 0 0 0.00013095 4 80573 84.884 76.883 1 0.70958 0.83914 0 47981000 25634000 22347000 3026 469 1549 1721 4918;4919;4920;4921 4919 KGHAVGDIPGVR 12 1 1 Unmodified _KGHAVGDIPGVR_ 0 0 0 1 A8K517;P62266;D6RD47 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 302.1736 4 302.17419 1204.66765 105447.5 -0.51395 -0.0001553 0.13241 4.0012E-05 -0.38154 -0.00011529 302.174150677854 306.680025054457 132.55 1.3114 132.55 132.04 133.35 0 284 108 4 0 0 0 0.0046822 1 80494 38.238 31.349 1 0.6844 0.74862 0 10162000 5482300 4679600 3027 469 1549 1721 4922 4922 KGHAVGDIPGVR 12 1 1 Unmodified _KGHAVGDIPGVR_ 0 0 0 1 A8K517;P62266;D6RD47 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 402.5631 3 402.563161 1204.66765 92532.04 -0.33097 -0.00013324 0.37336 0.0001503 0.042393 1.7066E-05 402.563319954578 408.570677371378 145.52 0.63658 145.52 145.27 145.91 0 79 22 6 0 0 0 0.0022667 2 83787 62.694 57.8 1 0.6897 0.80195 0 30303000 18380000 11923000 3028 469 1549 1721 4923;4924 4923 KGHAVGDIPGVR 12 1 1 Unmodified _KGHAVGDIPGVR_ 0 0 0 1 A8K517;P62266;D6RD47 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 306.6797 4 302.17419 1204.66765 110016.8 -0.45034 -0.00013608 0.37309 0.00011274 -0.077241 -2.334E-05 302.1742512332 306.679862526863 145.52 0.72491 145.52 145.27 145.99 0 102 28 6 0 0 0 0.0091152 2 83883 30.563 20.876 1 0.65887 0.71356 0 7223500 4795500 2428100 3029 469 1549 1721 4925;4926 4926 KGHAVGDIPGVR 12 1 1 Unmodified _KGHAVGDIPGVR_ 0 0 0 1 A8K517;P62266;D6RD47 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 402.5633 3 402.563161 1204.66765 93100.38 -0.38664 -0.00015565 0.47658 0.00019185 0.089937 3.6205E-05 402.563353865118 408.570724248436 146.57 1.0612 146.57 145.77 146.83 0 366 87 5 0 0 0 0.0013367 2 84336 68.536 68.536 1 0.69005 0.8172 0 52934000 23200000 29734000 3030 469 1549 1721 4927;4928 4927 KGHAVGDIPGVR 12 1 1 Unmodified _KGHAVGDIPGVR_ 0 0 0 1 A8K517;P62266;D6RD47 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 302.1741 4 302.17419 1204.66765 107379.5 -0.47617 -0.00014389 0.41325 0.00012487 -0.062917 -1.9012E-05 302.174266529811 306.679943691193 146.15 0.43649 146.15 145.82 146.26 0 81 30 4 0 0 0 0.012668 1 84364 25.701 25.701 1 0.69093 0.74057 0 2568800 1681100 887710 3031 469 1549 1721 4929 4929 KGHAVGDIPGVR 12 1 1 Unmodified _KGHAVGDIPGVR_ 0 0 0 1 A8K517;P62266;D6RD47 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 402.563 3 402.563161 1204.66765 93100.38 -0.37262 -0.00015 0.38576 0.00015529 0.013142 5.2903E-06 402.563304980995 408.570707627803 146.92 6.7354 146.92 145.27 152 0 1292 551 7 0 0 0 0.00034816 4 84724 78.692 78.692 1 0.71081 0.83032 0 34364000 19579000 14785000 3032 469 1549 1721 4930;4931;4932;4933 4930 KGHAVGDIPGVR 12 1 1 Unmodified _KGHAVGDIPGVR_ 0 0 0 1 A8K517;P62266;D6RD47 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 306.6797 4 302.17419 1204.66765 108272.8 -0.51562 -0.00015581 0.47193 0.00014261 -0.043684 -1.32E-05 302.174294424102 306.679910003258 146.97 0.4496 146.97 146.84 147.29 0 167 44 6 0 0 0 0.0051847 2 84769 36.847 36.847 1 0.61691 0.66502 0 6159700 3885100 2274600 3033 469 1549 1721 4934;4935 4935 KGHAVGDIPGVR 12 1 1 Unmodified _KGHAVGDIPGVR_ 0 0 0 1 A8K517;P62266;D6RD47 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 302.1743 4 302.17419 1204.66765 107879.7 -0.51741 -0.00015635 0.41455 0.00012527 -0.10286 -3.1081E-05 302.174283407828 306.679917187154 147.39 1.0948 147.39 147.17 148.26 0 201 85 4 0 0 0 0.0073353 1 85159 32.999 32.999 1 0.63908 0.69006 0 6521600 2845400 3676200 3034 469 1549 1721 4936 4936 KGHAVGDIPGVR 12 1 1 Unmodified _KGHAVGDIPGVR_ 0 0 0 1 A8K517;P62266;D6RD47 A8K517 A8K517 RPS23 40S ribosomal protein S23 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 603.34 2 603.341104 1204.66765 NaN NaN NaN -0.12332 -7.4404E-05 NaN NaN NaN NaN 132.54 1.1081 132.54 132.13 133.24 0 0 0 0 0.0010705 1 80906 77.379 60.603 1 NaN NaN 0 2702500 2702500 0 3035 469 1549 1721 4937 4937 KGHAVGDIPGVR 12 1 1 Unmodified _KGHAVGDIPGVR_ 0 0 0 1 A8K517;P62266;D6RD47 A8K517 A8K517 RPS23 40S ribosomal protein S23 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 306.6799 4 302.17419 1204.66765 NaN NaN NaN 0.55869 0.00016882 NaN NaN NaN NaN 147.81 0.15785 147.81 147.78 147.94 0 0 0 0 0.015188 1 85182 28.764 19.332 1 NaN NaN 0 1381100 0 1381100 3036 469 1549 1721 4938 4938 KGHAVGDIPGVR 12 1 1 Unmodified _KGHAVGDIPGVR_ 0 0 0 1 A8K517;P62266;D6RD47 A8K517 A8K517 RPS23 40S ribosomal protein S23 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 603.3409 2 603.341104 1204.66765 NaN NaN NaN NaN NaN NaN NaN NaN NaN 146.36 1 146.36 145.86 146.86 0 0 0 0 0.018978 1 84436 49.35 40.136 1 3037 469 1549 1721 4939 4939 KGHAVGDIPGVR 12 1 1 Unmodified _KGHAVGDIPGVR_ 0 0 0 1 A8K517;P62266;D6RD47 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 408.5704 3 402.563161 1204.66765 96099.82 0.17104 6.8855E-05 -0.20536 -8.2669E-05 -0.034315 -1.3814E-05 402.563009614251 408.570534952191 61.333 0.55293 61.333 61.046 61.599 3.8147E-06 135 50 4 0 0 0 0.0033199 2 37957 49.448 49.448 1 1.8263 1.5152 0 8495600 3883500 4612100 3038 469 1549 1721 4940;4941 4941 KGPQSLFNAPR 11 1 1 Unmodified _KGPQSLFNAPR_ 0 0 0 1 P46087;F5H5X6;F5GWB7;F5H709 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 411.567 3 405.559528 1213.65676 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.04 1 105.04 104.54 105.54 0 0 0 0 0.0030271 1 60892 57.347 33.623 1 3039 995 1550 1722 4942 4942 KGPQSLFNAPR 11 1 1 Unmodified _KGPQSLFNAPR_ 0 0 0 1 P46087;F5H5X6;F5GWB7;F5H709 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 411.5669 3 405.559528 1213.65676 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.14 1 105.14 104.64 105.64 0 0 0 0 0.0031969 1 60959 56.548 35.152 1 3040 995 1550 1722 4943 4943 KGPQSLFNAPR 11 1 1 Unmodified _KGPQSLFNAPR_ 0 0 0 1 P46087;F5H5X6;F5GWB7;F5H709 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 405.5593 3 405.559528 1213.65676 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.48 1 105.48 104.98 105.98 0 0 0 0 0.015324 1 61198 31.068 17.634 1 3041 995 1550 1722 4944 4944 KGQEADLEAGGEEVPEANGSAGK 23 2 0 Phospho (STY) _KGQEADLEAGGEEVPEANGS(ph)AGK_ KGQEADLEAGGEEVPEANGS(1)AGK KGQEADLEAGGEEVPEANGS(45.19)AGK 0 0 1 1 Q9NX58 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 775.3417 3 775.007703 2322.00128 68128.16 0.64413 0.0004992 0.076382 5.9197E-05 0.72051 0.0005584 775.007971073929 780.351027872381 72.671 0.5747 72.671 72.321 72.896 0 125 44 5 0 0 0 3.9187E-07 1 36772 45.193 45.193 1 0.5466 0.65163 0 26432000 16583000 9848800 3042 1222 1551 1723 4945 4945 2477 KGSLAALYDLAVLK 14 2 0 Phospho (STY) _KGS(ph)LAALYDLAVLK_ KGS(1)LAALYDLAVLK KGS(64.75)LAALY(-64.75)DLAVLK 0 0 1 1 A0A024R3K9;A0A024R3N2;Q6P4R8;E9PQ59;B4DSL1 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 779.4358 2 771.420574 1540.8266 69724.23 1.1277 0.00086989 -0.28684 -0.00022128 0.84081 0.00064861 771.419746510361 779.4347569518 134.64 0.14767 134.64 134.56 134.71 0 31 6 7 0 0 0 7.1176E-18 1 86915 112.74 89.381 2 1.6475 1.354 0 14601000 5306400 9294800 3043 76 1552 1724 4946 4946 99 KGSLLPTSPR 10 1 1 Phospho (STY) _KGSLLPT(ph)SPR_ KGSLLPT(0.5)S(0.5)PR KGS(-30.52)LLPT(0)S(0)PR 0 0 1 1 B4DSD6;H7C128;H7C179;H7C127;B2R5V7;A8K1N6 B4DSD6 B4DSD6 BRD8 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 577.3093 2 568.297188 1134.57982 81553.15 0.72277 0.00041075 0.016384 9.3109E-06 0.73915 0.00042006 568.297056810268 577.308437513445 59.289 1.7725 59.289 58.712 60.485 0 463 167 4 0 0 0 0.016635 2 36660 52.576 35.662 3 1.564 1.1983 0 14955000 6013200 8941900 3044 445 1553 1725 4947;4948 4947 773;2732 KGSPTPGFSTR 11 1 1 Phospho (STY) _KGS(ph)PTPGFSTR_ KGS(0.997)PT(0.003)PGFSTR KGS(25.82)PT(-25.82)PGFS(-40.64)T(-40.64)R 0 0 1 1 J3KPS2;Q6ZRV2 J3KPS2 J3KPS2 FAM83H Protein FAM83H MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 616.7944 2 607.781902 1213.54925 76353.31 0.77113 0.00046868 -0.044009 -2.6748E-05 0.72712 0.00044193 607.78188271685 616.793075376387 27.754 0.46432 27.754 27.547 28.012 1.9073E-06 162 29 8 0 0 0 0.0028956 1 13620 64.104 56.537 4 2.3696 1.8294 0 106870000 32753000 74117000 3045 890 1554 1726 4949 4949 1509 KHELLNSTR 9 1 1 Unmodified _KHELLNSTR_ 0 0 0 1 X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347 X5D2J9 X5D2J9 GTF2I General transcription factor II-I ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 372.548 3 366.540245 1096.59891 NaN NaN NaN -0.13053 -4.7843E-05 NaN NaN NaN NaN 109.18 0.86033 109.18 108.6 109.46 0 0 0 0 0.0059198 2 64254 51.762 37.317 1 NaN NaN 0 8094800 0 8094800 3046 506 1555 1727 4950;4951 4951 KHSPSPPPPTPTESR 15 1 1 2 Phospho (STY) _KHS(ph)PS(ph)PPPPTPTESR_ KHS(1)PS(1)PPPPTPTESR KHS(52.77)PS(49.67)PPPPT(-49.67)PT(-63.78)ES(-66.51)R 0 0 2 1 Q58EY4;Q92922;Q05BW5;Q05CR1;B4DYQ1 Q58EY4 Q58EY4 SMARCC1 SWI/SNF complex subunit SMARCC1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 592.2574 3 592.256886 1773.74883 78787.74 0.3808 0.00022553 0.28131 0.00016661 0.66211 0.00039214 592.257089362694 598.264513566121 51.995 1.5338 51.995 51.348 52.881 0 447 121 4 0 0 0 3.3274E-05 1 21332 72.801 67.722 10 0.70989 0.84434 0 73787000 45936000 27851000 3047 1092 1556 1728 4952 4952 2056;2057 KIDDPIDEEEEFEELK 16 2 0 Unmodified _KIDDPIDEEEEFEELK_ 0 0 0 1 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 665.3203 3 659.977359 1976.91025 79492.1 0.85633 0.00056516 0.16158 0.00010664 1.0179 0.0006718 660.311949145047 665.320499625561 121.18 0.39276 121.18 120.98 121.37 7.6294E-06 62 31 4 0 0 0 2.5735E-16 2 73111 102.08 91.269 1 0.8463 0.88702 0 7321700 4048200 3273500 3048 1167 1557 1729 4953;4954 4954 KIDDPIDEEEEFEELK 16 2 0 Unmodified _KIDDPIDEEEEFEELK_ 0 0 0 1 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 659.9771 3 659.977359 1976.91025 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.97 1 121.97 121.47 122.47 -7.6294E-06 0 0 0 0.0003741 1 73701 41.348 26.875 1 3049 1167 1557 1729 4955 4955 KIDDPIDEEEEFEELK 16 2 0 Unmodified _KIDDPIDEEEEFEELK_ 0 0 0 1 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 665.32 3 659.977359 1976.91025 NaN NaN NaN NaN NaN NaN NaN NaN NaN 122.32 1 122.32 121.82 122.82 0 0 0 0 0.034192 1 73948 31.41 20.751 1 3050 1167 1557 1729 4956 4956 KIEDNNTLVFIVDVK 15 2 0 Unmodified _KIEDNNTLVFIVDVK_ 0 0 0 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 583.3265 3 582.992727 1745.95635 81642.13 0.90904 0.00052996 -0.10211 -5.953E-05 0.80693 0.00047043 583.327020576945 588.335256188137 122.53 0.30592 122.53 122.36 122.66 0 62 27 4 0 0 0 0.00239 2 79227 34.395 34.395 1 0.74085 0.65927 0 2967800 1239400 1728400 3051 511 1558 1730 4957;4958 4958 KIEHDVVMK 9 2 0 Oxidation (M) _KIEHDVVM(ox)K_ KIEHDVVM(1)K KIEHDVVM(46.82)K 0 1 0 1 K7ESE5;A0A0A0MQS3;Q9UNZ5 K7ESE5 K7ESE5 C19orf53 Leydig cell tumor 10 kDa protein homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 557.7993 2 557.799891 1113.58523 85621.55 0.41308 0.00023041 -0.00026294 -1.4667E-07 0.41281 0.00023027 557.799936204594 565.814243501816 83.184 0.22025 83.184 83.075 83.295 0 38 16 4 0 0 0 0.0058165 2 44550 46.819 31.157 1 0.6988 0.76812 0 14391000 7724400 6666200 3052 280 1559 1731 4959;4960 4959 69 KIEHDVVMK 9 2 0 Oxidation (M) _KIEHDVVM(ox)K_ KIEHDVVM(1)K KIEHDVVM(42.34)K 0 1 0 1 K7ESE5;A0A0A0MQS3;Q9UNZ5 K7ESE5 K7ESE5 C19orf53 Leydig cell tumor 10 kDa protein homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 372.2022 3 372.202353 1113.58523 97599.27 -0.26526 -9.8729E-05 -0.23778 -8.8501E-05 -0.50303 -0.00018723 372.202356281071 377.544948371646 83.991 0.68752 83.991 83.787 84.475 0 132 61 5 0 0 0 0.0063513 1 45051 42.338 27.439 1 0.61966 0.77001 0 37201000 20647000 16554000 3053 280 1559 1731 4961 4961 69 KIEIDNKVSDEEDK 14 3 0 Phospho (STY) _KIEIDNKVS(ph)DEEDK_ KIEIDNKVS(1)DEEDK KIEIDNKVS(119.66)DEEDK 0 0 1 2 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 581.2682 3 581.267907 1740.78189 77927.23 0.78975 0.00045906 -0.12394 -7.2043E-05 0.66581 0.00038701 581.267926210925 589.282034609883 75.966 0.96124 75.966 75.615 76.577 0 527 84 9 0 0 0 1.8165E-23 2 39072 119.66 94.295 1 0.61807 0.78281 0 494210000 286230000 207980000 3054 1035 1560 1732 4962;4963 4962 1915 KIEIDNKVSDEEDK 14 3 0 Phospho (STY) _KIEIDNKVS(ph)DEEDK_ KIEIDNKVS(1)DEEDK KIEIDNKVS(83.11)DEEDK 0 0 1 2 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 883.4188 2 871.398222 1740.78189 65319.76 0.82777 0.00072132 -0.63299 -0.00055159 0.19478 0.00016973 871.397841835452 883.418952876072 75.969 0.56384 75.969 75.729 76.292 0 209 50 6 0 0 0 3.6755E-06 3 39215 83.106 69.076 1 0.61058 0.77332 0 36227000 22061000 14165000 3055 1035 1560 1732 4964;4965;4966 4966 1915 KIEIDNKVSDEEDK 14 3 0 Phospho (STY) _KIEIDNKVS(ph)DEEDK_ KIEIDNKVS(1)DEEDK KIEIDNKVS(59.61)DEEDK 0 0 1 2 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 871.9004 2 871.398222 1740.78189 65871.52 1.0275 0.00089534 0.045023 3.9233E-05 1.0725 0.00093457 871.398234905866 883.419784188138 32.168 2.1029 32.168 31.63 33.733 0 822 162 9 0 0 0 0.0010882 1 17743 59.606 46.979 1 1.1726 1.0427 0 49240000 20877000 28363000 3056 1035 1560 1732 4967 4967 1915 KIEISQHAK 9 2 0 Unmodified _KIEISQHAK_ 0 0 0 1 G5E9R3;M0R0A1;C9J4Z3;Q6P4E4;E9PEL3;M0R2L6;P61513 G5E9R3 G5E9R3 RPL37A 60S ribosomal protein L37a MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 351.8732 3 351.873224 1052.59784 96429.33 0.26181 9.2125E-05 0.052195 1.8366E-05 0.31401 0.00011049 351.873147265502 357.2160349847 16.464 0.28038 16.464 16.332 16.612 0 48 9 8 0 0 0 0.007918 1 3838 43.651 9.4782 1 0.7989 0.62914 0 34507000 19989000 14517000 3057 737 1561 1733 4968 4968 KIEPGTAADSQQIHEEK 17 2 0 Unmodified _KIEPGTAADSQQIHEEK_ 0 0 0 1 A0A024R2G2;Q9BXW9 A0A024R2G2 A0A024R2G2 FANCD2 Fanconi anemia group D2 protein MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 632.9926 3 627.6498 1879.92757 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.169 1 77.169 76.669 77.669 0 0 0 0 0.0021132 1 40166 45.577 28.892 1 3058 63 1562 1734 4969 4969 KIEQVDKEDEITEK 14 3 0 Unmodified _KIEQVDKEDEITEK_ 0 0 0 2 B3KN82;Q9Y2X3 B3KN82 B3KN82 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 568.9632 3 568.628113 1702.86251 80922.74 0.52112 0.00029632 0.11752 6.6823E-05 0.63864 0.00036315 568.628327284366 576.642199343141 87.819 1.2108 87.819 86.92 88.131 0 222 111 4 0 0 0 8.703E-09 1 47587 97.797 76.022 1 0.7581 0.96016 0 44601000 24344000 20257000 3059 578 1563 1735 4970 4970 KIEQVDKEDEITEK 14 3 0 Unmodified _KIEQVDKEDEITEK_ 0 0 0 2 B3KN82;Q9Y2X3 B3KN82 B3KN82 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 568.9631 3 568.628113 1702.86251 83185.65 0.81297 0.00046228 0.56376 0.00032057 1.3767 0.00078285 568.962423207175 576.642491252077 89.805 0.33501 89.805 89.593 89.928 0 64 29 4 0 0 0 0.010637 1 49318 28.089 16.616 1 0.90596 1.1474 0 14304000 4977700 9326500 3060 578 1563 1735 4971 4971 KIEQVDKEDEITEK 14 3 0 Unmodified _KIEQVDKEDEITEK_ 0 0 0 2 B3KN82;Q9Y2X3 B3KN82 B3KN82 NOP58 Nucleolar protein 58 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 576.6422 3 568.628113 1702.86251 NaN NaN NaN -0.23955 -0.00013621 NaN NaN NaN NaN 88.19 0.7384 88.19 87.774 88.512 -7.6294E-06 0 0 0 0.00024566 3 48217 62.237 42.842 1 NaN NaN 0 22264000 0 22264000 3061 578 1563 1735 4972;4973;4974 4974 KIEQVDKEDEITEK 14 3 0 Unmodified _KIEQVDKEDEITEK_ 0 0 0 2 B3KN82;Q9Y2X3 B3KN82 B3KN82 NOP58 Nucleolar protein 58 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 576.9766 3 568.628113 1702.86251 NaN NaN NaN -0.34708 -0.00019736 NaN NaN NaN NaN 89.014 0.30151 89.014 88.85 89.151 0 0 0 0 0.00044562 1 48639 55.885 35.459 1 NaN NaN 0 9942900 0 9942900 3062 578 1563 1735 4975 4975 KIEQVDKEDEITEK 14 3 0 Unmodified _KIEQVDKEDEITEK_ 0 0 0 2 B3KN82;Q9Y2X3 B3KN82 B3KN82 NOP58 Nucleolar protein 58 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 576.6423 3 568.628113 1702.86251 NaN NaN NaN 0.77269 0.00043938 NaN NaN NaN NaN 89.407 0.22749 89.407 89.227 89.454 0 0 0 0 0.021589 1 48845 31.42 17.336 1 NaN NaN 0 5578300 0 5578300 3063 578 1563 1735 4976 4976 KIEQVDKEDEITEK 14 3 0 Unmodified _KIEQVDKEDEITEK_ 0 0 0 2 B3KN82;Q9Y2X3 B3KN82 B3KN82 NOP58 Nucleolar protein 58 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 568.6295 3 568.628113 1702.86251 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.783 1 86.783 86.283 87.283 0 0 0 0 1.6249E-05 1 47084 52.599 39.181 1 3064 578 1563 1735 4977 4977 KIEQVDKEDEITEK 14 3 0 Unmodified _KIEQVDKEDEITEK_ 0 0 0 2 B3KN82;Q9Y2X3 B3KN82 B3KN82 NOP58 Nucleolar protein 58 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 568.6293 3 568.628113 1702.86251 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.71 1 88.71 88.21 89.21 -7.6294E-06 0 0 0 0.0024279 1 48468 38.661 27.187 1 3065 578 1563 1735 4978 4978 KIEQVDKEDEITEK 14 3 0 Unmodified _KIEQVDKEDEITEK_ 0 0 0 2 B3KN82;Q9Y2X3 B3KN82 B3KN82 NOP58 Nucleolar protein 58 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 576.642 3 568.628113 1702.86251 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.32 1 90.32 89.82 90.82 0 0 0 0 0.029948 1 49671 35.037 15.962 1 3066 578 1563 1735 4979 4979 KIMIER 6 1 1 Unmodified _KIMIER_ 0 0 0 1 H0YGG4;F5H0D0;Q14232 H0YGG4 H0YGG4 EIF2B1 Translation initiation factor eIF-2B subunit alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 395.2338 2 395.236199 788.457844 92171.08 0.14454 5.7127E-05 -3.7682 -0.0014893 -3.6237 -0.0014322 395.234651741798 404.245847114226 103.1 3.3943 103.1 101.01 104.41 7.6294E-06 1064 261 7 0 0 0 0.014044 1 59102 98.513 0 1 0.75946 0.92504 0 459460000 255130000 204330000 3067 825 1564 1736 4980 4980 KIMIER 6 1 1 Unmodified _KIMIER_ 0 0 0 1 H0YGG4;F5H0D0;Q14232 H0YGG4 H0YGG4 EIF2B1 Translation initiation factor eIF-2B subunit alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 395.2345 2 395.236199 788.457844 93501.19 -0.21024 -8.3096E-05 -3.6933 -0.0014597 -3.9035 -0.0015428 395.234658367658 404.245865566785 103.83 2.2454 103.83 103.76 106.01 0 564 156 6 0 0 0 0.020837 1 60751 96.119 0 1 0.74858 0.90704 0 307610000 168820000 138790000 3068 825 1564 1736 4981 4981 KIPDPDSDDVSEVDAR 16 1 1 Phospho (STY) _KIPDPDS(ph)DDVSEVDAR_ KIPDPDS(0.991)DDVS(0.009)EVDAR KIPDPDS(20.61)DDVS(-20.61)EVDAR 0 0 1 1 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 928.4074 2 919.39621 1836.77787 64477.7 0.59913 0.00055084 0.24351 0.00022388 0.84264 0.00077472 919.396546745563 928.407233014834 76.644 1.05 76.644 76.024 77.074 0 316 91 5 0 0 0 1.1069E-09 1 39750 87.287 74.732 2 0.6722 0.79222 0 43716000 27452000 16264000 3069 434 1565 1737 4982 4982 754 KIPDPDSDDVSEVDAR 16 1 1 Unmodified _KIPDPDSDDVSEVDAR_ 0 0 0 1 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;Q59FZ6 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 586.6115 3 586.611122 1756.81154 NaN NaN NaN 1.155 0.00067751 NaN NaN NaN NaN 83.209 0.17017 83.209 83.125 83.295 0 0 0 0 0.0047067 1 44588 26.837 16.641 1 NaN NaN 0 4224300 4224300 0 3070 434 1565 1738 4983 4983 KIPDTVLEK 9 2 0 Unmodified _KIPDTVLEK_ 0 0 0 1 P78527;B4DL41 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 521.811 2 521.810782 1041.60701 84550.51 0.58296 0.0003042 -0.1437 -7.4986E-05 0.43926 0.00022921 521.810724462994 529.824799799641 94.881 0.47092 94.881 94.665 95.136 0 118 36 5 0 0 0 0.034051 1 53115 55.112 22.502 1 0.64296 0.79034 0 34020000 21036000 12984000 3071 1027 1566 1739 4984 4984 KISENSYSLDDLEIGPGQLSSSTFDSEK 28 2 0 Phospho (STY) _KIS(ph)ENSYSLDDLEIGPGQLSSSTFDSEK_ KIS(0.254)ENS(0.254)Y(0.238)S(0.254)LDDLEIGPGQLSSSTFDSEK KIS(0)ENS(0)Y(-0.28)S(0)LDDLEIGPGQLS(-41.96)S(-45.56)S(-46.52)T(-46.41)FDS(-51.35)EK 0 0 1 1 B4DN52;Q53GG0;Q9UHB6;F8VQE1;F8VRN8 B4DN52 B4DN52 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1048.8179 3 1042.80613 3125.39657 58471.2 0.75824 0.0007907 -0.43452 -0.00045312 0.32372 0.00033758 1043.47379219812 1048.48293606024 123.92 1.605 123.92 123.29 124.9 0 1047 141 11 0 0 0 5.611E-11 1 75368 51.844 51.844 9 2.1182 2.6947 0 78980000 23833000 55147000 3072 644 1567 1740 4985 4985 1065;1066;1067 KISLPIEDYFNK 12 2 0 Phospho (STY) _KIS(ph)LPIEDYFNK_ KIS(1)LPIEDYFNK KIS(82.87)LPIEDY(-82.87)FNK 0 0 1 1 B7Z8A5;B7ZAI3;Q9UBD5;B4E014 B7Z8A5 B7Z8A5 ORC3 Origin recognition complex subunit 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 781.8965 2 773.881282 1545.74801 69157.53 0.97555 0.00075496 -0.36912 -0.00028565 0.60643 0.0004693 773.881162332478 781.894777194531 125.53 1.6277 125.53 124.95 126.57 0 393 147 4 0 0 0 3.0294E-06 3 76457 94.09 69.899 2 1.6273 1.9134 0 23588000 8600000 14988000 3073 715 1568 1741 4986;4987;4988 4987 1187 KITDGLHALQEASNK 15 2 0 Unmodified _KITDGLHALQEASNK_ 0 0 0 1 B7ZLZ7;A0A024R158;O95347;Q05BV1;A8K984;Q2KQ72;B3KMB1 B7ZLZ7 B7ZLZ7 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 542.2938 3 542.293288 1623.85803 NaN NaN NaN -0.46381 -0.00025152 NaN NaN NaN NaN 126.27 0.3239 126.27 126.02 126.34 0 0 0 0 0.015831 1 76511 30.133 17.153 1 NaN NaN 0 4316400 4316400 0 3074 39 1569 1742 4989 4989 KITDGLHALQEASNK 15 2 0 Unmodified _KITDGLHALQEASNK_ 0 0 0 1 B7ZLZ7;A0A024R158;O95347;Q05BV1;A8K984;Q2KQ72;B3KMB1 B7ZLZ7 B7ZLZ7 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 547.636 3 542.293288 1623.85803 82737.88 0.76359 0.00041409 -0.6095 -0.00033053 0.15409 8.356E-05 542.293616736837 547.969640054836 126.42 0.15723 126.42 126.34 126.5 -7.6294E-06 38 13 5 0 0 0 0.025199 1 76655 21.272 21.272 1 0.65083 0.67992 0 4779900 3030900 1749000 3075 39 1569 1742 4990 4990 KKDELER 7 2 1 Unmodified _KKDELER_ 0 0 0 2 M0R0F0;A0A024R4Q8;M0R0R2;P46782;M0QZN2 M0R0F0 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 306.5065 3 306.506541 916.497795 108546 -0.52492 -0.00016089 0.44363 0.00013598 -0.081282 -2.4913E-05 306.506648562058 315.185501302034 83.107 1.4415 83.107 82.144 83.586 0 357 134 4 0 0 0 0.01214 2 44539 54.205 22.269 1 1.0382 1.2196 0 58377000 26480000 31897000 3076 91 1570 1743 4991;4992 4992 KKDELSDYAEK 11 3 0 Phospho (STY) _KKDELS(ph)DYAEK_ KKDELS(0.999)DY(0.001)AEK KKDELS(30.8)DY(-30.8)AEK 0 0 1 2 A4LAA3;P46100;A0A096LNL9;B7Z1D8;A0A096LP59 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 715.3369 2 703.315972 1404.61739 73029.93 0.89018 0.00062608 -0.070992 -4.993E-05 0.81919 0.00057615 703.315704243305 715.337234829501 79.722 0.84816 79.722 79.165 80.014 0 235 78 5 0 0 0 0.0038936 1 41840 53.946 39.07 2 0.625 0.79159 0 31548000 18446000 13102000 3077 422 1571 1744 4993 4993 723 KKDELSDYAEK 11 3 0 Phospho (STY) _KKDELS(ph)DYAEK_ KKDELS(1)DYAEK KKDELS(41.41)DY(-41.41)AEK 0 0 1 2 A4LAA3;P46100;A0A096LNL9;B7Z1D8;A0A096LP59 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 703.3179 2 703.315972 1404.61739 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.247 1 79.247 78.747 79.747 -7.6294E-06 0 0 0 0.030062 1 41732 47.712 30.501 2 3078 422 1571 1744 4994 4994 723 KKDELSDYAEK 11 3 0 Phospho (STY) _KKDELS(ph)DYAEK_ KKDELS(1)DYAEK KKDELS(43.55)DY(-43.55)AEK 0 0 1 2 A4LAA3;P46100;A0A096LNL9;B7Z1D8;A0A096LP59 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 715.3384 2 703.315972 1404.61739 71743.97 0.64091 0.00045076 0.67475 0.00047456 1.3157 0.00092532 703.316259571991 715.33769914392 24.45 0.44868 24.45 24.278 24.727 -1.9073E-06 134 23 8 0 0 0 0.0031154 1 10704 62.077 62.077 2 1.0248 0.90917 0 55671000 27323000 28348000 3079 422 1571 1744 4995 4995 723 KKEELLK 7 3 0 Unmodified _KKEELLK_ 0 0 0 2 P42766;F2Z388;A0A024R866 P42766 P42766 RPL35 60S ribosomal protein L35 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 444.2814 2 444.28166 886.548768 89674.33 0.2324 0.00010325 -0.13093 -5.817E-05 0.10147 4.508E-05 444.281540632068 456.302799743717 116.43 7.3824 116.43 114.99 122.38 7.6294E-06 2434 636 6 0 0 0 0.0057651 10 71117 123.69 18.682 1 0.52313 0.66256 0 257720000 167290000 90428000 3080 992 1572 1745 4996;4997;4998;4999;5000;5001;5002;5003;5004;5005 5000 KKEEPSQNDISPK 13 3 0 Phospho (STY) _KKEEPSQNDIS(ph)PK_ KKEEPSQNDIS(1)PK KKEEPS(-91.75)QNDIS(91.75)PK 0 0 1 2 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 527.251 3 527.250299 1578.72907 81395.78 0.2088 0.00011009 0.017181 9.0588E-06 0.22598 0.00011915 527.250400038459 535.264533843649 68.344 1.2538 68.344 68.152 69.406 7.6294E-06 378 120 10 0 0 0 1.6355E-20 1 33780 130.01 114.77 2 0.77351 0.97968 0 439960000 236390000 203570000 3081 1214 1573 1746 5006 5006 2441 KKEEPSQNDISPK 13 3 0 Phospho (STY) _KKEEPSQNDIS(ph)PK_ KKEEPSQNDIS(1)PK KKEEPS(-44.05)QNDIS(44.05)PK 0 0 1 2 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 790.3715 2 790.37181 1578.72907 69176.47 0.58183 0.00045986 0.13698 0.00010826 0.71881 0.00056813 790.371812988852 802.393187413875 68.34 0.34052 68.34 68.187 68.527 0 144 31 6 0 0 0 1.3089E-20 2 33809 133.48 111.72 2 0.78644 0.99606 0 54156000 25639000 28517000 3082 1214 1573 1746 5007;5008 5007 2441 KKEEPSQNDISPK 13 3 0 Phospho (STY) _KKEEPSQNDIS(ph)PK_ KKEEPSQNDIS(1)PK KKEEPS(-76.14)QNDIS(76.14)PK 0 0 1 2 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 527.5845 3 527.250299 1578.72907 82778.39 0.76688 0.00040434 -0.30269 -0.00015959 0.46419 0.00024474 527.250238045667 535.26424381935 16.407 0.81571 16.407 16.237 17.053 0 111 29 9 0 0 0 1.248E-07 1 3771 99.663 99.663 2 1.2698 1.1277 0 52754000 21674000 31080000 3083 1214 1573 1746 5009 5009 2441 KKEEPSQNDISPK 13 3 0 Phospho (STY) _KKEEPSQNDIS(ph)PK_ KKEEPS(0.003)QNDIS(0.997)PK KKEEPS(-25.6)QNDIS(25.6)PK 0 0 1 2 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 790.3723 2 790.37181 1578.72907 67204.73 1.0123 0.00080007 -0.078396 -6.1962E-05 0.93388 0.00073811 790.371571207365 802.393023797055 16.429 0.44822 16.429 16.27 16.718 0 66 15 8 0 0 0 6.203E-07 1 3791 96.489 74.434 2 1.2258 1.1015 0 27702000 12381000 15321000 3084 1214 1573 1746 5010 5010 2441 KKEEPSQNDISPK 13 3 0 Unmodified _KKEEPSQNDISPK_ 0 0 0 2 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 508.61 3 500.594855 1498.76274 86032.37 0.28846 0.0001444 0.17544 8.7823E-05 0.4639 0.00023222 500.595120202737 508.609103744652 15.737 0.41276 15.737 15.485 15.898 9.5367E-07 88 24 5 0 0 0 0.013942 1 3208 27.993 25.878 1 3.1941 3.0445 0 3606500 1105900 2500600 3085 1214 1573 1747 5011 5011 KKEGEEEQAINR 12 2 1 Unmodified _KKEGEEEQAINR_ 0 0 0 2 A0A024R3R7;Q5T3Q7;B2RWN5;Q9H583;B7ZAU8;B4E263;B3KWS1;A2VDI1;Q8N7L7 A0A024R3R7 A0A024R3R7 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 477.5794 3 477.579317 1429.71612 88458.13 0.38025 0.0001816 -0.29207 -0.00013949 0.088179 4.2113E-05 477.579070152434 486.258163564698 79.561 1.5151 79.561 78.639 80.154 0 347 136 4 0 0 0 0.0026968 3 41993 55.578 42.789 1 0.89668 1.0527 0 52748000 24924000 27824000 3086 80 1574 1748 5012;5013;5014 5013 KKEPAITSQNSPEAR 15 2 1 Phospho (STY) _KKEPAITSQNS(ph)PEAR_ KKEPAITSQNS(1)PEAR KKEPAIT(-63.31)S(-39.48)QNS(39.48)PEAR 0 0 1 2 E5RIS7;B7Z4W0;P23193 E5RIS7 E5RIS7 TCEA1 Transcription elongation factor A protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 587.9634 3 579.284002 1734.83018 78757.23 0.61287 0.00035502 0.10903 6.3157E-05 0.72189 0.00041818 579.284046231771 587.962917526217 17.69 0.31597 17.69 17.557 17.873 0 77 12 9 0 0 0 4.672E-09 2 4890 96.012 96.012 3 0.46724 0.38808 0 32106000 20612000 11495000 3087 706 1575 1749 5015;5016 5016 1171 KKPAPGPHSSPPEEK 15 3 0 Phospho (STY) _KKPAPGPHS(ph)SPPEEK_ KKPAPGPHS(0.5)S(0.5)PPEEK KKPAPGPHS(0)S(0)PPEEK 0 0 1 2 M0QYC5;B7Z392;O75182 M0QYC5 M0QYC5 SIN3B Paired amphipathic helix protein Sin3b MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 555.9384 3 555.938055 1664.79234 79920.44 0.28328 0.00015748 0.43266 0.00024053 0.71593 0.00039801 555.93810293328 563.952535906211 14.812 0.32899 14.812 14.67 14.999 9.5367E-07 36 8 11 0 0 0 8.0692E-09 1 2569 92.492 77.299 2 1.0582 0.94805 0 32688000 15846000 16843000 3088 703 1576 1750 5017 5017 1160;1161 KKPEEEGSAHQDTAEK 16 3 0 Unmodified _KKPEEEGSAHQDTAEK_ 0 0 0 2 B3KM90;Q643R0;Q9ULW0 B3KM90 B3KM90 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 446.9675 4 446.716882 1782.83842 89314.91 -0.024836 -1.1095E-05 -0.16502 -7.3716E-05 -0.18985 -8.4811E-05 446.967563201687 452.727506773808 65.99 0.56068 65.99 65.721 66.281 0 238 43 8 0 0 0 0.00042075 1 31883 38.661 38.661 1 0.70843 0.89724 0 76336000 38360000 37976000 3089 571 1577 1751 5018 5018 KKPNATRPVTPPR 13 2 2 Unmodified _KKPNATRPVTPPR_ 0 0 0 3 B4DNE3;A0A024RBP2;F8W0W8;P36873 B4DNE3 B4DNE3 PPP1CC Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 375.2322 4 366.221672 1460.85758 NaN NaN NaN -0.71222 -0.00026083 NaN NaN NaN NaN 98.395 1.9705 98.395 97.046 99.016 -7.6294E-06 0 0 0 0.0019952 2 55206 48.14 26.267 1 NaN NaN 0 42528000 0 42528000 3090 201 1578 1752 5019;5020 5019 KKPNPVEEEPSR 12 2 1 Unmodified _KKPNPVEEEPSR_ 0 0 0 2 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 479.2636 3 470.584291 1408.73104 86840.2 0.45384 0.00021357 -0.3134 -0.00014748 0.14044 6.6091E-05 470.584286564207 479.262952146269 80.526 2.1875 80.526 79.707 81.895 0 1076 200 10 0 0 0 0.0014928 4 42517 67.519 59.214 1 1.5948 1.9025 0 1093600000 440770000 652820000 3091 994 1579 1753 5021;5022;5023;5024 5023 KKPNPVEEEPSR 12 2 1 Unmodified _KKPNPVEEEPSR_ 0 0 0 2 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 353.1909 4 353.190037 1408.73104 99233.21 -0.0039506 -1.3953E-06 0.11732 4.1436E-05 0.11337 4.0041E-05 353.190209631049 359.699194666922 80.304 0.30119 80.304 80.111 80.412 0 73 28 4 0 0 0 0.021258 2 42493 22.055 13.645 1 1.8578 2.176 0 33622000 10044000 23578000 3092 994 1579 1753 5025;5026 5026 KKPNPVEEEPSR 12 2 1 Unmodified _KKPNPVEEEPSR_ 0 0 0 2 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 718.392 2 705.372798 1408.73104 70695.63 0.73825 0.00052074 0.023473 1.6558E-05 0.76173 0.0005373 705.37267953797 718.391139066259 15.69 0.44839 15.69 15.45 15.898 0 136 25 8 0 0 0 0.019451 1 3174 58.274 47.902 1 3.2752 2.7428 0 19012000 4248000 14764000 3093 994 1579 1753 5027 5027 KKPNPVEEEPSR 12 2 1 Unmodified _KKPNPVEEEPSR_ 0 0 0 2 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 470.5841 3 470.584291 1408.73104 86574.31 0.35287 0.00016605 -0.29082 -0.00013686 0.062048 2.9199E-05 470.584303495797 479.263023814491 15.694 0.62116 15.694 15.45 16.071 0 211 33 10 0 0 0 0.0035459 1 3185 47.039 42.698 1 3.5103 2.8789 0 71658000 16435000 55223000 3094 994 1579 1753 5028 5028 KKSTPKEETVNDPEEAGHR 19 3 1 2 Phospho (STY) _KKS(ph)T(ph)PKEETVNDPEEAGHR_ KKS(0.762)T(0.762)PKEET(0.477)VNDPEEAGHR KKS(3.42)T(3.42)PKEET(-3.42)VNDPEEAGHR 0 0 2 3 A8K9K6;O00567;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 579.0057 4 578.754348 2310.98828 77999.31 0.66327 0.00038387 0.22797 0.00013194 0.89124 0.00051581 579.005400730636 587.267207226386 16.543 0.97491 16.543 16.149 17.124 0 141 34 12 0 0 0 8.9216E-29 1 3883 114.15 114.15 3 0.99447 1.0632 0 98264000 44824000 53440000 3095 504 1580 1754 5029 5029 865;2753 KKSTPKEETVNDPEEAGHR 19 3 1 2 Phospho (STY) _KKS(ph)T(ph)PKEETVNDPEEAGHR_ KKS(0.816)T(0.873)PKEET(0.311)VNDPEEAGHR KKS(5.72)T(7.34)PKEET(-5.72)VNDPEEAGHR 0 0 2 3 A8K9K6;O00567;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 771.6716 3 771.336705 2310.98828 68550.45 1.0473 0.00080779 -0.015761 -1.2157E-05 1.0315 0.00079563 771.670803230507 782.687033679565 16.569 0.68365 16.569 16.149 16.833 0 125 23 11 0 0 0 1.0436E-17 1 3904 92.275 92.275 3 0.9715 1.0387 0 86488000 43795000 42693000 3096 504 1580 1754 5030 5030 865;2753 KLDAEDVIGSR 11 1 1 Unmodified _KLDAEDVIGSR_ 0 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 610.8333 2 601.822409 1201.63027 79380.88 1.1637 0.00070035 0.67115 0.00040391 1.8349 0.0011043 601.822961419437 610.834048224585 96.609 0.84053 96.609 95.947 96.787 0 132 70 4 0 0 0 0.033622 2 54297 51.286 40.065 1 1.669 1.8911 0 20963000 5462900 15501000 3097 994 1581 1755 5031;5032 5031 KLDAEDVIGSR 11 1 1 Unmodified _KLDAEDVIGSR_ 0 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 601.8228 2 601.822409 1201.63027 NaN NaN NaN -0.10093 -6.0744E-05 NaN NaN NaN NaN 95.599 0.59129 95.599 95.292 95.883 0 0 0 0 0.00048454 3 53783 80.014 60.743 1 NaN NaN 0 7283800 7283800 0 3098 994 1581 1755 5033;5034;5035 5034 KLDAEDVIGSR 11 1 1 Unmodified _KLDAEDVIGSR_ 0 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 610.834 2 601.822409 1201.63027 NaN NaN NaN 0.14276 8.5916E-05 NaN NaN NaN NaN 97.626 1.3224 97.626 96.787 98.11 0 0 0 0 1.2966E-15 2 55471 112.13 74.039 1 NaN NaN 0 45774000 0 45774000 3099 994 1581 1755 5036;5037 5037 KLDAEDVIGSR 11 1 1 Unmodified _KLDAEDVIGSR_ 0 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 407.5571 3 401.550698 1201.63027 NaN NaN NaN -2.2153 -0.00088954 NaN NaN NaN NaN 97.273 0.064583 97.273 97.243 97.307 0 0 0 0 0.028801 1 55035 32.254 20.388 1 NaN NaN 0 1783200 0 1783200 3100 994 1581 1755 5038 5038 KLDAEDVIGSR 11 1 1 Unmodified _KLDAEDVIGSR_ 0 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 601.8234 2 601.822409 1201.63027 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.156 1 97.156 96.656 97.656 -7.6294E-06 0 0 0 0.033703 1 54936 49.159 27.696 1 3101 994 1581 1755 5039 5039 KLDAEDVIGSR 11 1 1 Unmodified _KLDAEDVIGSR_ 0 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 601.3094 2 601.822409 1201.63027 80034.02 0.93157 0.00056064 0.65731 0.00039558 1.5889 0.00095622 601.823028663898 611.335102105539 97.733 0.72678 97.733 97.369 98.095 0 144 59 5 0 0 0 0.012766 1 55166 49.448 29.661 1 1.3914 1.6248 0 34043000 19888000 14155000 3102 994 1581 1755 5040 5040 KLDDDSDSPSFFEEKPEEPVVLALDPK 27 3 0 Phospho (STY) _KLDDDSDS(ph)PSFFEEKPEEPVVLALDPK_ KLDDDS(0.205)DS(0.662)PS(0.133)FFEEKPEEPVVLALDPK KLDDDS(-5.08)DS(5.08)PS(-6.98)FFEEKPEEPVVLALDPK 0 0 1 2 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1051.5024 3 1042.8196 3125.43697 60755.34 0.56519 0.00058939 -0.40057 -0.00041772 0.16462 0.00017167 1043.15311093558 1051.16791288737 145.35 0.15581 145.35 145.25 145.41 0 17 4 8 0 0 0 1.7067E-09 1 83715 46.351 46.351 3 NaN NaN 0 37435000 23024000 14411000 3103 552 1582 1756 5041 5041 911;912 KLDEAVAEAHLGK 13 2 0 Unmodified _KLDEAVAEAHLGK_ 0 0 0 1 Q1RMG2;P23526 Q1RMG2 Q1RMG2 AHCY Adenosylhomocysteinase MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 466.2638 3 460.920903 1379.74088 90993.83 0.29311 0.0001351 -0.23545 -0.00010852 0.057662 2.6578E-05 460.92069527936 466.263626640664 108.99 0.90079 108.99 108.54 109.44 7.6294E-06 234 73 5 0 0 0 0.0020504 1 64056 46.797 46.797 1 1.4233 1.6484 0 20995000 8257500 12737000 3104 975 1583 1757 5042 5042 KLDELYGTWR 10 1 1 Unmodified _KLDELYGTWR_ 0 0 0 1 H3BM89;Q59GY2;P36578;B4DMJ2;B4DMJ6;Q53G74 H3BM89 H3BM89 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 649.8474 2 640.83532 1279.65609 76621.78 0.80894 0.0005184 -0.080623 -5.1666E-05 0.72832 0.00046673 640.835172281556 649.846518552281 121.68 2.3274 121.68 120.56 122.89 -7.6294E-06 534 178 6 0 0 0 1.0557E-09 4 73338 130.66 70.856 1 0.6962 0.81109 0 31964000 18490000 13474000 3105 866 1584 1758 5043;5044;5045;5046 5044 KLDELYGTWR 10 1 1 Unmodified _KLDELYGTWR_ 0 0 0 1 H3BM89;Q59GY2;P36578;B4DMJ2;B4DMJ6;Q53G74 H3BM89 H3BM89 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 640.8352 2 640.83532 1279.65609 77000.77 0.91926 0.00058909 -0.55484 -0.00035556 0.36442 0.00023353 640.834892538918 649.846241462776 123.47 0.31899 123.47 123.37 123.69 7.6294E-06 83 27 5 0 0 0 0.018323 1 74759 65.347 38.833 1 0.68735 0.75168 0 10089000 5373700 4715400 3106 866 1584 1758 5047 5047 KLDELYGTWR 10 1 1 Unmodified _KLDELYGTWR_ 0 0 0 1 H3BM89;Q59GY2;P36578;B4DMJ2;B4DMJ6;Q53G74 H3BM89 H3BM89 RPL4 60S ribosomal protein L4 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 649.8481 2 640.83532 1279.65609 NaN NaN NaN NaN NaN NaN NaN NaN NaN 120.71 1 120.71 120.21 121.21 0 0 0 0 0.029689 1 72726 53.683 31.597 1 3107 866 1584 1758 5048 5048 KLDELYGTWR 10 1 1 Unmodified _KLDELYGTWR_ 0 0 0 1 H3BM89;Q59GY2;P36578;B4DMJ2;B4DMJ6;Q53G74 H3BM89 H3BM89 RPL4 60S ribosomal protein L4 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 649.8476 2 640.83532 1279.65609 NaN NaN NaN NaN NaN NaN NaN NaN NaN 123.08 1 123.08 122.58 123.58 7.6294E-06 0 0 0 0.0045011 1 74488 73.067 46.552 1 3108 866 1584 1758 5049 5049 KLDVEEPDSANSSFYSTR 18 1 1 Unmodified _KLDVEEPDSANSSFYSTR_ 0 0 0 1 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q96HN5;H0YFY6;Q7Z757;Q59HB8;Q9UNL7 A0A087WY61 A0A087WY61 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 688.6617 3 682.320119 2043.93853 NaN NaN NaN -1.3609 -0.00092855 NaN NaN NaN NaN 97.037 0.21183 97.037 96.929 97.141 0 0 0 0 0.001028 1 54824 41.912 30.612 1 NaN NaN 0 9927100 0 9927100 3109 110 1585 1759 5050 5050 KLDVEEPDSANSSFYSTR 18 1 1 Phospho (STY) _KLDVEEPDS(ph)ANSSFYSTR_ KLDVEEPDS(0.925)ANS(0.056)S(0.016)FY(0.001)S(0.001)T(0.001)R KLDVEEPDS(12.21)ANS(-12.21)S(-17.59)FY(-30.5)S(-28.4)T(-28.4)R 0 0 1 1 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q96HN5;H0YFY6;Q7Z757;Q59HB8;Q9UNL7 A0A087WY61 A0A087WY61 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 709.311 3 708.975563 2123.90486 71083.05 0.90745 0.00064336 0.28168 0.0001997 1.1891 0.00084306 709.310181759845 714.983090700614 83.872 0.93779 83.872 83.511 84.449 0 495 84 10 0 0 0 9.602E-05 1 53713 42.806 42.806 6 1.2631 0.97376 0 45822000 18745000 27078000 3110 110 1585 1760 5051 5051 145 KLDYGQHVVAGTPGR 15 1 1 Unmodified _KLDYGQHVVAGTPGR_ 0 0 0 1 A0A024R8W0;P38919 A0A024R8W0 A0A024R8W0 DDX48;EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 533.2871 3 533.286356 1596.83724 82628.47 1.1817 0.00063017 -0.18719 -9.9825E-05 0.99449 0.00053035 533.286213322285 539.293641168858 101.42 0.73553 101.42 100.88 101.62 0 221 59 6 0 0 0 0.0017254 1 58216 35.832 30.714 1 1.9247 2.2457 0 33308000 11160000 22148000 3111 158 1586 1761 5052 5052 KLEEEQIILEDQNCK 15 2 0 Unmodified _KLEEEQIILEDQNCK_ 0 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q99529 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 635.9944 3 630.315541 1887.92479 78127.73 0.7703 0.00048553 0.26109 0.00016457 1.0314 0.0006501 630.315949043186 635.658595156696 104.17 0.57017 104.17 103.82 104.39 0 130 41 5 0 0 0 0.000458 2 60411 46.926 44.691 1 1.5359 1.7119 0 15911000 6670700 9240400 3112 49 1587 1762 5053;5054 5054 KLEKEEEEGISQESSEEEQ 19 2 0 2 Phospho (STY) _KLEKEEEEGIS(ph)QES(ph)SEEEQ_ KLEKEEEEGIS(1)QES(0.815)S(0.185)EEEQ KLEKEEEEGIS(36.75)QES(6.45)S(-6.45)EEEQ 0 0 2 2 P17096;Q6ZP45;Q5T6U8 P17096;Q5T6U8 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1198.9672 2 1198.96694 2395.91932 NaN NaN NaN 0.27481 0.00032949 NaN NaN NaN NaN 37.688 1.6607 37.688 36.703 38.364 0 0 0 0 9.7017E-20 2 21520 99.343 76.697 3 NaN NaN 0 41006000 41006000 0 3113 968;1105 1588 1763 5055;5056 5056 1717;1718;1719 KLEKEEEEGISQESSEEEQ 19 2 0 2 Phospho (STY) _KLEKEEEEGISQES(ph)S(ph)EEEQ_ KLEKEEEEGISQES(1)S(1)EEEQ KLEKEEEEGIS(-46.98)QES(46.98)S(55.02)EEEQ 0 0 2 2 P17096;Q6ZP45;Q5T6U8 P17096;Q5T6U8 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1199.4686 2 1198.96694 2395.91932 NaN NaN NaN 0.20852 0.00025001 NaN NaN NaN NaN 39.444 2.8629 39.444 38.223 41.086 3.8147E-06 0 0 0 2.0967E-58 3 22611 136.81 99.699 3 NaN NaN 0 130460000 130460000 0 3114 968;1105 1588 1763 5057;5058;5059 5058 1717;1718;1719 KLELEEDSEMDLPAFADSDDDLER 24 1 1 Oxidation (M),Phospho (STY) _KLELEEDSEM(ox)DLPAFADS(ph)DDDLER_ KLELEEDSEM(1)DLPAFADSDDDLER KLELEEDSEMDLPAFADS(1)DDDLER KLELEEDSEM(42.32)DLPAFADSDDDLER KLELEEDS(-33.23)EMDLPAFADS(33.23)DDDLER 0 1 1 1 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 966.4078 3 960.066847 2877.17871 62616.04 0.62884 0.00060373 0.56805 0.00054537 1.1969 0.0011491 960.401974953216 966.408738537223 118.59 0.85259 118.59 118.01 118.86 0 262 73 6 0 0 0 4.0947E-06 1 70952 42.319 35.52 2 0.78987 0.89694 0 21557000 13158000 8399100 3115 1062 1589 1764 5060 5060 305 1998 KLESLDALEPEEK 13 2 0 Phospho (STY) _KLES(ph)LDALEPEEK_ KLES(1)LDALEPEEK KLES(57.7)LDALEPEEK 0 0 1 1 B7Z9T5;A0A024R632;Q14807;Q14985;O60846 B7Z9T5 B7Z9T5 KIF22;OBP-2;A-328A3.5 Kinesin-like protein;Kinesin-like protein KIF22 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 798.8912 2 790.876394 1579.73823 70831.06 0.9726 0.00076921 0.13354 0.00010561 1.1061 0.00087482 790.876354194269 798.890828589116 92.775 0.94975 92.775 92.315 93.265 0 402 93 7 0 0 0 0.0020611 1 59747 57.703 46.817 1 0.74362 0.60955 0 14348000 8445300 5902900 3116 116 1590 1765 5061 5061 171 KLGAGEGGEASVSPEK 16 2 0 2 Phospho (STY) _KLGAGEGGEAS(ph)VS(ph)PEK_ KLGAGEGGEAS(1)VS(1)PEK KLGAGEGGEAS(103.66)VS(103.66)PEK 0 0 2 1 J3KQ96;E7ETY2;Q13428;B4DRA2;Q9UFD4 J3KQ96 J3KQ96 TCOF1;DKFZp434G1035 Treacle protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 846.3683 2 838.352432 1674.69031 66672.76 0.61082 0.00051208 0.52387 0.00043919 1.1347 0.00095127 838.352729742708 846.367549730092 50.217 1.1278 50.217 49.577 50.705 0 384 98 5 0 0 0 1.7691E-16 2 20244 103.66 96.398 1 0.43452 0.54424 0 45411000 30875000 14535000 3117 792 1591 1766 5062;5063 5062 1347;1348 KLGAGEGGEASVSPEK 16 2 0 Phospho (STY) _KLGAGEGGEASVS(ph)PEK_ KLGAGEGGEAS(0.001)VS(0.999)PEK KLGAGEGGEAS(-28.55)VS(28.55)PEK 0 0 1 1 J3KQ96;E7ETY2;Q13428;B4DRA2;Q9UFD4 J3KQ96 J3KQ96 TCOF1;DKFZp434G1035 Treacle protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 806.3853 2 798.369267 1594.72398 68088.5 0.84436 0.00067411 0.021419 1.71E-05 0.86578 0.00069121 798.369376400316 806.383520626459 59.299 1.31 59.299 58.967 60.277 0 671 99 11 0 0 0 8.3594E-37 3 26384 135.26 109.54 2 0.5434 0.74266 0 1009300000 651110000 358230000 3118 792 1591 1767 5064;5065;5066 5065 1347;1348 KLGAGEGGEASVSPEK 16 2 0 Phospho (STY) _KLGAGEGGEASVS(ph)PEK_ KLGAGEGGEAS(0.001)VS(0.999)PEK KLGAGEGGEAS(-30.73)VS(30.73)PEK 0 0 1 1 J3KQ96;E7ETY2;Q13428;B4DRA2;Q9UFD4 J3KQ96 J3KQ96 TCOF1;DKFZp434G1035 Treacle protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 537.925 3 532.581937 1594.72398 81696.07 0.49747 0.00026495 -0.032318 -1.7212E-05 0.46516 0.00024773 532.581990906397 537.92467344011 59.303 1.0617 59.303 58.943 60.004 0 462 81 9 0 0 0 1.3265E-09 2 26479 83.167 71.577 2 0.56088 0.73523 0 229160000 149450000 79707000 3119 792 1591 1767 5067;5068 5068 1347;1348 KLGAGEGGEASVSPEK 16 2 0 Phospho (STY) _KLGAGEGGEASVS(ph)PEK_ KLGAGEGGEAS(0.001)VS(0.999)PEK KLGAGEGGEAS(-32.72)VS(32.72)PEK 0 0 1 1 J3KQ96;E7ETY2;Q13428;B4DRA2;Q9UFD4 J3KQ96 J3KQ96 TCOF1;DKFZp434G1035 Treacle protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 532.5825 3 532.581937 1594.72398 82373.23 0.75704 0.00040319 -0.28454 -0.00015154 0.47251 0.00025165 532.581939522733 537.924474201026 27.633 1.614 27.633 27.375 28.989 0 606 110 11 0 0 0 1.8525E-44 1 13508 147.08 128.76 2 0.56061 0.41151 0 411830000 253560000 158270000 3120 792 1591 1767 5069 5069 1347;1348 KLGAGEGGEASVSPEK 16 2 0 Phospho (STY) _KLGAGEGGEASVS(ph)PEK_ KLGAGEGGEAS(0.023)VS(0.977)PEK KLGAGEGGEAS(-16.24)VS(16.24)PEK 0 0 1 1 J3KQ96;E7ETY2;Q13428;B4DRA2;Q9UFD4 J3KQ96 J3KQ96 TCOF1;DKFZp434G1035 Treacle protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 798.3699 2 798.369267 1594.72398 67756 0.98697 0.00078797 -0.50355 -0.00040202 0.48342 0.00038595 798.370036688178 806.382892035449 27.614 4.4847 27.614 27.348 31.833 1.9073E-06 1462 316 14 0 0 0 4.1373E-05 2 14883 63.443 50.325 2 0.57522 0.41057 0 3336300000 2038000000 1298300000 3121 792 1591 1767 5070;5071 5071 1347;1348 KLGVSVSPSR 10 1 1 Phospho (STY) _KLGVS(ph)VSPSR_ KLGVS(0.595)VS(0.389)PS(0.017)R KLGVS(1.85)VS(-1.85)PS(-15.48)R 0 0 1 1 E7ERS3;B4DTK7;Q86VM9;Q86YU5;H3BP01 E7ERS3 E7ERS3 ZC3H18;FLJ00419 Zinc finger CCCH domain-containing protein 18 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 564.3005 2 555.289363 1108.56417 79983.16 0.56766 0.00031522 0.51437 0.00028562 1.082 0.00060084 555.289877985702 564.300936072747 68.005 0.81799 68.005 67.662 68.48 0 152 69 4 0 0 0 0.0022695 1 33884 66.498 47.255 3 0.69641 0.81561 0 36853000 23474000 13379000 3122 660 1592 1768 5072 5072 1097;1098 KLGVSVSPSR 10 1 1 Phospho (STY) _KLGVS(ph)VSPSR_ KLGVS(0.639)VS(0.345)PS(0.016)R KLGVS(2.67)VS(-2.67)PS(-15.97)R 0 0 1 1 E7ERS3;B4DTK7;Q86VM9;Q86YU5;H3BP01 E7ERS3 E7ERS3 ZC3H18;FLJ00419 Zinc finger CCCH domain-containing protein 18 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 564.3018 2 555.289363 1108.56417 80824.59 0.78307 0.00043483 -0.0056278 -3.1251E-06 0.77744 0.0004317 555.289248953154 564.300616196057 39.017 2.175 39.017 38.522 40.697 0 800 196 6 0 0 0 0.0090895 2 22301 42.095 34.529 3 0.58809 0.45343 0 49494000 30851000 18643000 3123 660 1592 1768 5073;5074 5073 1097;1098 KLPFQR 6 1 1 Unmodified _KLPFQR_ 0 0 0 1 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;A8K4Y7;Q6TXQ4;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 394.7423 2 394.742505 787.470458 94780.58 0.21562 8.5116E-05 -0.86405 -0.00034108 -0.64842 -0.00025596 394.742052422317 403.75358601059 96.514 1.6755 96.514 95.657 97.332 7.6294E-06 638 142 8 0 0 0 0.013967 1 54465 98.54 22.6 1 0.80438 1.01 0 4752500000 2567300000 2185100000 3124 527;1108 1593 1769 5075 5075 KLPFQR 6 1 1 Unmodified _KLPFQR_ 0 0 0 1 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;A8K4Y7;Q6TXQ4;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 394.7428 2 394.742505 787.470458 94695.23 -0.19319 -7.6259E-05 -1.3926 -0.00054972 -1.5858 -0.00062598 394.741888769453 403.753363753128 98.37 2.7922 98.37 98.234 101.03 0 1025 225 9 0 0 0 0.010276 1 57453 101.72 25.17 1 0.81783 1.0293 0 5709900000 3173900000 2536000000 3125 527;1108 1593 1769 5076 5076 KLPFQR 6 1 1 Unmodified _KLPFQR_ 0 0 0 1 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;A8K4Y7;Q6TXQ4;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 394.7425 2 394.742505 787.470458 NaN NaN NaN 0.18275 7.2139E-05 NaN NaN NaN NaN 104.94 0.82407 104.94 104.68 105.5 0 0 0 0 0.00055056 1 60916 71.348 15.891 1 NaN NaN 0 9096400 9096400 0 3126 527;1108 1593 1769 5077 5077 KLPPPPGSPLGHSPTASPPPTAR 23 1 1 3 Phospho (STY) _KLPPPPGS(ph)PLGHS(ph)PTAS(ph)PPPTAR_ KLPPPPGS(0.998)PLGHS(0.985)PT(0.473)AS(0.538)PPPT(0.005)AR KLPPPPGS(24.72)PLGHS(15.87)PT(-0.58)AS(0.58)PPPT(-20.9)AR 0 0 3 1 B9EGQ5;M0QXA7;O95785;B3KR89 B9EGQ5 B9EGQ5 WIZ Protein Wiz MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 834.0475 3 833.712657 2498.11614 65875.87 0.59489 0.00049596 -0.03733 -3.1123E-05 0.55756 0.00046484 834.047009425474 840.054500583563 84.773 1.5994 84.773 84.011 85.61 0 895 149 9 0 0 0 3.533E-07 1 46000 44.893 44.893 10 0.59411 0.71384 0 161170000 87908000 73260000 3127 731 1594 1770 5078 5078 1209;1210;1211 KLQLEETMPSPYGR 14 1 1 Oxidation (M),Phospho (STY) _KLQLEETM(ox)PS(ph)PYGR_ KLQLEETM(1)PSPYGR KLQLEET(0.003)MPS(0.957)PY(0.04)GR KLQLEETM(47.04)PSPYGR KLQLEET(-25.36)MPS(13.77)PY(-13.77)GR 0 1 1 1 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B4DKD0;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 582.2705 3 582.270705 1743.79029 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.482 1 81.482 80.982 81.982 0 0 0 0 0.00043192 1 43360 47.037 30.915 3 3128 1032 1595 1771 5079 5079 295 1866 KLQLEETMPSPYGR 14 1 1 Oxidation (M),Phospho (STY) _KLQLEETM(ox)PS(ph)PYGR_ KLQLEETM(1)PSPYGR KLQLEET(0.001)MPS(0.828)PY(0.172)GR KLQLEETM(47.77)PSPYGR KLQLEET(-30.85)MPS(6.83)PY(-6.83)GR 0 1 1 1 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B4DKD0;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 582.2706 3 582.270705 1743.79029 79126.6 0.85555 0.00049816 -0.29486 -0.00017169 0.56069 0.00032647 582.270677727108 588.277592073974 68.836 1.3559 68.836 68.057 69.413 0 689 120 7 0 0 0 0.00094102 1 43334 47.774 31.651 3 0.95191 0.73241 0 32078000 15406000 16672000 3129 1032 1595 1771 5080 5080 295 1866 KLSPIIEDSR 10 1 1 Phospho (STY) _KLS(ph)PIIEDSR_ KLS(1)PIIEDSR KLS(71.35)PIIEDS(-71.35)R 0 0 1 1 O60566 O60566 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 619.3133 2 619.313035 1236.61152 76714.51 0.752 0.00046573 -0.13706 -8.4882E-05 0.61494 0.00038084 619.312520714833 628.324293456065 80.067 2.1383 80.067 78.687 80.825 0 780 195 6 0 0 0 6.4055E-06 4 42362 97.463 80.096 2 0.89172 1.0702 0 147050000 80881000 66170000 3130 930 1596 1772 5081;5082;5083;5084 5083 1579 KLSPIIEDSR 10 1 1 Phospho (STY) _KLS(ph)PIIEDSR_ KLS(1)PIIEDSR KLS(60.11)PIIEDS(-60.11)R 0 0 1 1 O60566 O60566 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 619.3138 2 619.313035 1236.61152 78014.12 0.97822 0.00060582 0.263 0.00016288 1.2412 0.0007687 619.313022840111 628.324384727258 64.628 2.297 64.628 63.057 65.354 0 927 208 7 0 0 0 0.00037251 3 40042 81.803 68.848 2 1.3679 1.0551 0 62177000 26819000 35358000 3131 930 1596 1772 5085;5086;5087 5085 1579 KLSPIIEDSR 10 1 1 Phospho (STY) _KLS(ph)PIIEDSR_ KLS(1)PIIEDSR KLS(41.27)PIIEDS(-41.27)R 0 0 1 1 O60566 O60566 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 628.3248 2 619.313035 1236.61152 78014.1 1.0454 0.00064743 0.080494 4.9851E-05 1.1259 0.00069728 619.312949681659 628.324137456762 65.543 1.8324 65.543 65.15 66.982 0 590 167 7 0 0 0 0.0033039 2 41157 60.401 49.495 2 1.3067 1.0074 0 47684000 21467000 26217000 3132 930 1596 1772 5088;5089 5089 1579 KLSVPTSDEEDEVPAPK 17 2 0 Phospho (STY) _KLSVPT(ph)SDEEDEVPAPK_ KLS(0.006)VPT(0.497)S(0.497)DEEDEVPAPK KLS(-19.08)VPT(0)S(0)DEEDEVPAPK 0 0 1 1 Q5STZ8;B4DNU2;Q8NE71;Q2L6I2;F5GYK6;A0PJ72 Q5STZ8 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 960.9463 2 960.945536 1919.87652 63140.85 0.52708 0.00050649 0.18153 0.00017444 0.7086 0.00068093 960.945653541576 968.960858126297 86.797 1.0482 86.797 86.103 87.151 0 236 100 6 0 0 0 0.00024173 1 47062 50.305 35.626 3 0.34457 0.43005 0 40044000 28481000 11563000 3133 648 1597 1773 5090 5090 1078;2789 KLSVPTSDEEDEVPAPK 17 2 0 Phospho (STY) _KLSVPT(ph)SDEEDEVPAPK_ KLS(0.072)VPT(0.464)S(0.464)DEEDEVPAPK KLS(-8.11)VPT(0)S(0)DEEDEVPAPK 0 0 1 1 Q5STZ8;B4DNU2;Q8NE71;Q2L6I2;F5GYK6;A0PJ72 Q5STZ8 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 646.6433 3 640.966116 1919.87652 75903.59 0.86156 0.00055223 -0.18704 -0.00011989 0.67452 0.00043234 640.965968435031 646.643463369741 86.728 1.0289 86.728 86.094 87.123 0 252 98 5 0 0 0 0.00022727 1 47069 40.493 36.391 3 0.29683 0.36753 0 36121000 22871000 13249000 3134 648 1597 1773 5091 5091 1078;2789 KLTQTSGETTHTDK 14 2 0 Unmodified _KLTQTSGETTHTDK_ 0 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 521.9086 3 516.261765 1545.76346 84870.65 0.17017 8.7853E-05 0.0017881 9.2312E-07 0.17196 8.8776E-05 516.261534641444 521.604499197995 66.562 0.30325 66.562 66.395 66.699 0 70 19 6 0 0 0 0.033612 1 32393 16.327 3.1904 1 2.0961 2.5608 0 32346000 9634500 22711000 3135 994 1598 1774 5092 5092 KLTQTSGETTHTDKVPGGEDK 21 3 0 Unmodified _KLTQTSGETTHTDKVPGGEDK_ 0 0 0 2 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 558.0302 4 558.030294 2228.09207 79435.49 0.6804 0.00037968 -0.18737 -0.00010456 0.49303 0.00027513 558.280843251296 564.040954545496 17.334 0.26515 17.334 17.239 17.504 0 52 9 9 0 0 0 0.0010746 1 4583 27.408 15.785 1 4.0616 3.6634 0 22620000 4291300 18328000 3136 994 1599 1775 5093 5093 KMGSDEFDISPR 12 1 1 Oxidation (M),2 Phospho (STY) _KM(ox)GS(ph)DEFDIS(ph)PR_ KM(1)GSDEFDISPR KMGS(1)DEFDIS(1)PR KM(51.24)GSDEFDISPR KMGS(51.24)DEFDIS(51.24)PR 0 1 2 1 B9EGR5;Q8IWI9 B9EGR5 B9EGR5 MGA MAX gene-associated protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 788.2997 2 779.288247 1556.56194 69870.44 0.84662 0.00065976 1.073 0.00083616 1.9196 0.0014959 779.288439096364 788.299566151122 77.437 0.96613 77.437 76.879 77.845 0 234 85 5 0 0 0 0.0079468 1 40188 51.235 44.546 1 0.85002 0.9762 0 24974000 11604000 13371000 3137 732 1600 1776 5094 5094 190 1220;1221 KMSPQNIGAARPIK 14 2 1 Oxidation (M),Phospho (STY) _KM(ox)S(ph)PQNIGAARPIK_ KM(1)SPQNIGAARPIK KMS(1)PQNIGAARPIK KM(50.09)SPQNIGAARPIK KMS(50.09)PQNIGAARPIK 0 1 1 2 Q14865 Q14865 Q14865 ARID5B AT-rich interactive domain-containing protein 5B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 544.955 3 536.276014 1605.80621 81459.14 0.84189 0.00045149 -0.035373 -1.8969E-05 0.80652 0.00043252 536.275539865302 544.954884428281 26.474 0.45786 26.474 26.27 26.727 0 97 20 7 0 0 0 0.0010347 1 12513 50.088 43.812 1 2.3739 1.996 0 14724000 3765300 10959000 3138 1065 1601 1777 5095 5095 306 2004 KNKKEPK 7 4 0 Unmodified _KNKKEPK_ 0 0 0 3 A0A087WYS3;H7C4X9;A0A087WVZ6;Q9ULU4;Q5JV90 A0A087WYS3 A0A087WYS3 ZMYND8;DKFZp564P1772 Protein kinase C-binding protein 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 436.2715 2 436.271627 870.528701 NaN NaN NaN 0.35887 0.00015656 NaN NaN NaN NaN 69.297 0.59162 69.297 69.171 69.763 0 0 0 0 0.026896 1 34501 48.115 0 1 NaN NaN 0 9415800 9415800 0 3139 258 1602 1778 5096 5096 KPATPAEDDEDDDIDLFGSDNEEEDK 26 2 0 Phospho (STY) _KPATPAEDDEDDDIDLFGS(ph)DNEEEDK_ KPATPAEDDEDDDIDLFGS(1)DNEEEDK KPAT(-99.86)PAEDDEDDDIDLFGS(99.86)DNEEEDK 0 0 1 1 H0YE72;E9PL71;E9PQ49;E9PI39;E9PQZ1;E9PK01;Q9BW34;A0A087X1X7;Q71RH4;Q9H7G6;D3DWK1;B2RAR6;E9PRY8;P29692 H0YE72 H0YE72 EEF1D Elongation factor 1-delta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1002.7365 3 997.059185 2988.15573 60485.65 0.78105 0.00077875 -0.13194 -0.00013156 0.6491 0.00064719 997.393376265739 1002.73625258218 105.03 1.1326 105.03 104.55 105.69 0 560 76 10 0 0 0 2.9543E-46 1 61015 116.45 109.8 2 0.94091 1.2092 0 113150000 56089000 57066000 3140 274 1603 1779 5097 5097 437 KPDAKPENFITQIETTPTETASR 23 2 1 Phospho (STY) _KPDAKPENFITQIETT(ph)PTETASR_ KPDAKPENFITQIET(0.225)T(0.552)PT(0.161)ET(0.048)AS(0.015)R KPDAKPENFIT(-47.25)QIET(-3.9)T(3.9)PT(-5.36)ET(-10.59)AS(-15.69)R 0 0 1 2 B4E071;Q53FM2;B2R9C5;Q96IY1 B4E071 B4E071 C1orf48;NSL1 Kinetochore-associated protein NSL1 homolog MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 885.4304 3 885.42849 2653.26364 66734.92 0.81731 0.00072367 -0.035253 -3.1214E-05 0.78205 0.00069245 885.763086146517 894.441584453028 123.46 0.69959 123.46 123.26 123.96 0 118 61 5 0 0 0 1.0342E-12 1 74655 65.248 57.972 6 0.52757 0.61516 0 11609000 8211100 3397800 3141 545 1604 1780 5098 5098 2760 KPEDRPNTSEILR 13 1 2 Unmodified _KPEDRPNTSEILR_ 0 0 0 2 B7ZKK7;P19525 B7ZKK7 B7ZKK7 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 528.6054 3 518.945999 1553.81617 85770.62 0.3695 0.00019175 -0.24741 -0.00012839 0.12209 6.3359E-05 518.945967363734 528.289343753441 111.47 1.0952 111.47 110.83 111.92 0 233 95 4 0 0 0 0.030383 1 65505 20.381 20.381 1 1.388 1.5831 0 26317000 11272000 15045000 3142 720 1605 1781 5099 5099 KPEEEEEEELEETAQEK 17 2 0 Unmodified _KPEEEEEEELEETAQEK_ 0 0 0 1 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 692.6434 3 692.642816 2074.90662 73417.97 0.56681 0.0003926 0.16155 0.0001119 0.72836 0.0005045 692.977194111182 697.98568556301 83.048 1.4013 83.048 82.356 83.757 0 505 131 6 0 0 0 5.1862E-23 2 44162 115.87 96.861 1 0.84988 1.0737 0 61780000 32344000 29436000 3143 928 1606 1782 5100;5101 5100 KPEEEEEEELEETAQEK 17 2 0 Unmodified _KPEEEEEEELEETAQEK_ 0 0 0 1 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 698.3208 3 692.642816 2074.90662 72958.48 1.1742 0.00081328 0.063321 4.3859E-05 1.2375 0.00085714 692.977087436571 697.985777798592 59.047 0.9638 59.047 58.663 59.627 0 439 91 7 0 0 0 4.0042E-13 2 36415 99.371 79.707 1 1.1028 0.88186 0 29323000 13756000 15567000 3144 928 1606 1782 5102;5103 5103 KPFRPEASGSSR 12 1 2 Unmodified _KPFRPEASGSSR_ 0 0 0 2 O14647;A0A024RC75 O14647 O14647 CHD2 Chromodomain-helicase-DNA-binding protein 2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 449.5771 3 440.233592 1317.67895 NaN NaN NaN -0.069972 -3.0804E-05 NaN NaN NaN NaN 80.895 0.72137 80.895 80.433 81.154 0 0 0 0 0.0037883 1 42958 53.448 28.594 1 NaN NaN 0 20345000 0 20345000 3145 920 1607 1783 5104 5104 KPFSQHVR 8 1 1 Unmodified _KPFSQHVR_ 0 0 0 1 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B4DRX3;B2R4K7;F8VR69;F8VZ45;U3KQR5 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 339.5299 3 333.522526 997.545748 102291.5 -0.43838 -0.00014621 0.33563 0.00011194 -0.10275 -3.4269E-05 333.522594668188 339.530042576773 84.959 0.96418 84.959 84.159 85.123 0 455 85 7 0 0 0 0.0054558 2 45370 55.531 46.316 1 0.93702 1.1312 0 231230000 125040000 106190000 3146 199 1608 1784 5105;5106 5105 KPFSQHVR 8 1 1 Unmodified _KPFSQHVR_ 0 0 0 1 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B4DRX3;B2R4K7;F8VR69;F8VZ45;U3KQR5 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 339.5298 3 333.522526 997.545748 102658 -0.24978 -8.3307E-05 0.20125 6.7122E-05 -0.048528 -1.6185E-05 333.522589357 339.529986390002 86.219 4.2629 86.219 85.114 89.376 0 1013 398 6 0 0 0 0.0025402 7 46434 69.198 57.976 1 0.88517 1.0702 0 259310000 137260000 122050000 3147 199 1608 1784 5107;5108;5109;5110;5111;5112;5113 5108 KPFSQHVR 8 1 1 Unmodified _KPFSQHVR_ 0 0 0 1 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B4DRX3;B2R4K7;F8VR69;F8VZ45;U3KQR5 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 339.5301 3 333.522526 997.545748 102905.7 0.11743 3.9165E-05 0.35784 0.00011935 0.47527 0.00015851 333.522592458628 339.530052060255 90.044 2.3003 90.044 89.365 91.665 0 547 200 5 0 0 0 0.001951 5 49238 87.323 70.546 1 0.89276 1.0654 0 95389000 44701000 50688000 3148 199 1608 1784 5114;5115;5116;5117;5118 5114 KPGPPLSPEIR 11 1 1 Phospho (STY) _KPGPPLS(ph)PEIR_ KPGPPLS(1)PEIR KPGPPLS(45.12)PEIR 0 0 1 1 Q96JM3 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 635.8327 2 635.831395 1269.64824 77506.8 1.1449 0.00072797 0.38669 0.00024587 1.5316 0.00097384 635.831538698986 644.842882512744 70.156 0.7898 70.156 69.785 70.575 0 298 69 6 0 0 0 0.0061305 1 44294 45.115 21.366 1 1.3793 1.0885 0 10872000 4777900 6094000 3149 1180 1609 1785 5119 5119 2320 KPGPPLSPEIRSPAGSPELR 20 1 2 3 Phospho (STY) _KPGPPLS(ph)PEIRS(ph)PAGS(ph)PELR_ KPGPPLS(1)PEIRS(1)PAGS(1)PELR KPGPPLS(103.88)PEIRS(103.88)PAGS(103.88)PELR 0 0 3 2 Q96JM3 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 776.0211 3 775.686219 2324.03683 69010.37 1.0469 0.00081206 0.20129 0.00015614 1.2482 0.0009682 776.020626731706 785.030075840641 95.589 1.6501 95.589 94.695 96.346 0 928 143 10 0 0 0 7.2482E-23 1 53764 103.88 88.723 1 0.58324 0.69081 0 223140000 144400000 78740000 3150 1180 1610 1786 5120 5120 2320;2321;2322 KPLPDHVSIVEPK 13 2 0 Unmodified _KPLPDHVSIVEPK_ 0 0 0 1 E9PPU1;H0YEU2;E9PL09;Q53G83;P23396;E9PSF4;Q9NQS8 E9PPU1 E9PPU1 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 492.2914 3 486.948681 1457.82421 85471.27 0.37902 0.00018457 -0.10956 -5.3348E-05 0.26947 0.00013122 486.948554551046 492.291390375083 123.45 2.4406 123.45 122.48 124.92 0 986 212 7 0 0 0 4.5751E-27 6 75230 146.96 136.89 1 1.1335 1.4481 0 91954000 39035000 52919000 3151 812 1611 1787 5121;5122;5123;5124;5125;5126 5125 KPLPDHVSIVEPK 13 2 0 Unmodified _KPLPDHVSIVEPK_ 0 0 0 1 E9PPU1;H0YEU2;E9PL09;Q53G83;P23396;E9PSF4;Q9NQS8 E9PPU1 E9PPU1 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 492.2913 3 486.948681 1457.82421 85360.04 0.49906 0.00024302 -0.27026 -0.00013161 0.22879 0.00011141 486.94847796973 492.291348372718 125.17 0.67725 125.17 124.6 125.27 0 256 64 6 0 0 0 4.0163E-26 2 75709 140.03 140.03 1 1.1589 1.4183 0 32813000 13502000 19311000 3152 812 1611 1787 5127;5128 5127 KPLPDHVSIVEPK 13 2 0 Unmodified _KPLPDHVSIVEPK_ 0 0 0 1 E9PPU1;H0YEU2;E9PL09;Q53G83;P23396;E9PSF4;Q9NQS8 E9PPU1 E9PPU1 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 492.2916 3 486.948681 1457.82421 86104.3 0.51046 0.00024857 -0.20458 -9.962E-05 0.30588 0.00014895 486.948528636914 492.291338106741 125.77 0.83151 125.77 125.24 126.07 0 419 73 8 0 0 0 1.4096E-05 2 76182 89.46 89.46 1 1.0818 1.3591 0 50512000 20712000 29800000 3153 812 1611 1787 5129;5130 5129 KPLPDHVSIVEPK 13 2 0 Unmodified _KPLPDHVSIVEPK_ 0 0 0 1 E9PPU1;H0YEU2;E9PL09;Q53G83;P23396;E9PSF4;Q9NQS8 E9PPU1 E9PPU1 RPS3 40S ribosomal protein S3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 492.2918 3 486.948681 1457.82421 86104.29 0.51785 0.00025216 -0.27061 -0.00013177 0.24724 0.00012039 486.948509098321 492.291246605146 126.2 2.3027 126.2 126.04 128.34 0 652 207 6 0 0 0 5.6753E-07 3 76659 95.981 95.981 1 1.0899 1.3706 0 52338000 24037000 28301000 3154 812 1611 1787 5131;5132;5133 5131 KPLTPYFR 8 1 1 Unmodified _KPLTPYFR_ 0 0 0 1 B4DNQ1;E9PKP7;A8K962;P17480;Q05BZ1;Q9BQR2;E9PMM2 B4DNQ1 B4DNQ1 UBTF Nucleolar transcription factor 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 341.1989 3 341.19916 1020.57565 NaN NaN NaN 0.64795 0.00022108 NaN NaN NaN NaN 109.09 0.60242 109.09 108.73 109.34 0 0 0 0 0.0077259 1 63995 51.662 35.509 1 NaN NaN 0 7334900 7334900 0 3155 501 1612 1788 5134 5134 KPMKTSPEMDIQNPDDGAR 19 2 1 2 Oxidation (M),Phospho (STY) _KPM(ox)KT(ph)SPEM(ox)DIQNPDDGAR_ KPM(1)KTSPEM(1)DIQNPDDGAR KPMKT(0.5)S(0.5)PEMDIQNPDDGAR KPM(67.19)KTSPEM(67.19)DIQNPDDGAR KPMKT(0)S(0)PEMDIQNPDDGAR 0 2 1 2 P46013;B4DRH3 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 756.6678 3 747.988709 2240.9443 68883.37 0.63852 0.00047761 -0.53032 -0.00039668 0.1082 8.0932E-05 747.988682793891 756.667539789562 66.463 0.66042 66.463 66.18 66.84 0 368 46 12 0 0 0 7.9346E-09 2 32174 67.194 67.194 2 3.0504 3.6329 0 796690000 202460000 594230000 3156 994 1613 1789 5135;5136 5135 282;283 1787;2893 KPMKTSPEMDIQNPDDGAR 19 2 1 2 Oxidation (M),Phospho (STY) _KPM(ox)KT(ph)SPEM(ox)DIQNPDDGAR_ KPM(1)KTSPEM(1)DIQNPDDGAR KPMKT(0.5)S(0.5)PEMDIQNPDDGAR KPM(63.27)KTSPEM(63.27)DIQNPDDGAR KPMKT(0)S(0)PEMDIQNPDDGAR 0 2 1 2 P46013;B4DRH3 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 757.0029 3 747.988709 2240.9443 70633.75 0.19924 0.00014903 -0.029661 -2.2186E-05 0.16958 0.00012684 748.32311222613 756.667928457531 23.126 0.76456 23.126 22.839 23.603 0 200 42 9 0 0 0 1.3485E-08 1 9672 63.272 57.913 2 1.4959 1.2414 0 33777000 12021000 21757000 3157 994 1613 1789 5137 5137 282;283 1787;2893 KPMKTSPEMDIQNPDDGAR 19 2 1 2 Oxidation (M),Phospho (STY) _KPM(ox)KT(ph)SPEM(ox)DIQNPDDGAR_ KPM(1)KTSPEM(1)DIQNPDDGAR KPMKT(0.5)S(0.5)PEMDIQNPDDGAR KPM(82.27)KTSPEM(82.27)DIQNPDDGAR KPMKT(0)S(0)PEMDIQNPDDGAR 0 2 1 2 P46013;B4DRH3 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 561.4946 4 561.243351 2240.9443 79102.57 0.45703 0.00025651 -0.15895 -8.921E-05 0.29808 0.0001673 561.243392068162 567.752664222351 24.874 0.71883 24.874 24.683 25.402 0 233 35 10 0 0 0 2.7392E-13 1 11135 82.267 82.267 2 1.5172 1.2452 0 68685000 23976000 44709000 3158 994 1613 1789 5138 5138 282;283 1787;2893 KPNATRPVTPPR 12 1 2 Unmodified _KPNATRPVTPPR_ 0 0 0 2 B4DNE3;A0A024RBP2;F8W0W8;P36873 B4DNE3 B4DNE3 PPP1CC Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 445.2827 3 445.261482 1332.76262 91607.56 0.26352 0.00011734 0.23933 0.00010657 0.50286 0.0002239 445.261668930472 454.605105405758 80.317 0.77684 80.317 79.938 80.715 0 176 71 4 0 0 0 0.034631 1 42384 19.394 19.394 1 1.9916 2.2752 0 28894000 11031000 17864000 3159 201 1614 1790 5139 5139 KPNEGADGQWK 11 2 0 Unmodified _KPNEGADGQWK_ 0 0 0 1 Q63HR1;Q5VU21;D3DQ69;D3DQ70;Q8NC51 Q63HR1 Q63HR1 DKFZp686P17171;SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 623.7762 2 615.299101 1228.58365 79971.07 0.46115 0.00028375 -0.34581 -0.00021278 0.11534 7.0966E-05 615.299594917176 623.312467343088 66.72 0.22847 66.72 66.612 66.84 0 38 15 4 0 0 0 0.0052637 1 32607 74.849 59.984 1 1.2336 1.3539 0 14229000 7571900 6657100 3160 765 1615 1791 5140 5140 KPNPVEEEPSR 11 1 1 Unmodified _KPNPVEEEPSR_ 0 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 433.8929 3 427.88597 1280.63608 92119.28 0.03119 1.3346E-05 -0.19284 -8.2514E-05 -0.16165 -6.9168E-05 427.885916625266 433.893318675033 63.981 0.31857 63.981 63.774 64.093 -3.8147E-06 87 22 6 0 0 0 3.1851E-09 1 30304 111.63 97.372 1 1.6882 1.997 0 48410000 19205000 29205000 3161 994 1616 1792 5141 5141 KPNPVEEEPSR 11 1 1 Unmodified _KPNPVEEEPSR_ 0 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 650.3371 2 641.325316 1280.63608 NaN NaN NaN 0.25572 0.000164 NaN NaN NaN NaN 63.981 0.20069 63.981 63.837 64.038 0 0 0 0 7.9687E-10 1 30280 99.283 80.503 1 NaN NaN 0 7768600 0 7768600 3162 994 1616 1792 5142 5142 KPNPVEEEPSRR 12 1 2 Unmodified _KPNPVEEEPSRR_ 0 0 0 2 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 489.2638 3 479.919673 1436.73719 88389.78 0.089662 4.3031E-05 -0.087768 -4.2121E-05 0.0018943 9.091E-07 479.919464600447 489.263301093778 73.342 0.57605 73.342 73.025 73.601 0 150 49 4 0 0 0 0.0066838 1 37379 39.424 24.738 1 1.4636 1.6679 0 25138000 7366400 17772000 3163 994 1617 1793 5143 5143 KPPLLNNADSVQAK 14 2 0 Unmodified _KPPLLNNADSVQAK_ 0 0 0 1 B2R5W3;A0A024R3T8;P09874;B4E0E1 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 498.9467 3 498.94734 1493.82019 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.359 1 83.359 82.859 83.859 0 0 0 0 0.01295 1 44722 39.82 30.656 1 3164 81 1618 1794 5144 5144 KPPTDEELK 9 2 0 Unmodified _KPPTDEELK_ 0 0 0 1 B4DFG0;P35659;H0Y993;B4DNW3 B4DFG0 B4DFG0 DEK Protein DEK MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 528.7825 2 528.782222 1055.54989 83220.93 0.45206 0.00023904 -0.15223 -8.0498E-05 0.29983 0.00015855 528.782075890043 536.79628464553 67.352 0.63296 67.352 67.147 67.78 0 258 56 7 0 0 0 0.00075051 2 33015 85.807 33.331 1 0.61019 0.79931 0 223460000 138670000 84789000 3165 619 1619 1795 5145;5146 5146 KPQLDVTR 8 1 1 Unmodified _KPQLDVTR_ 0 0 0 1 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 487.7912 2 478.779816 955.545079 88608.45 0.39544 0.00018933 -0.33371 -0.00015977 0.061731 2.9555E-05 478.77958680584 487.790804387331 75.35 1.5174 75.35 74.238 75.756 7.6294E-06 276 133 4 0 0 0 0.021482 1 38475 70.256 29.029 1 0.88971 1.0489 0 44142000 20841000 23301000 3166 1068 1620 1796 5147 5147 KPQLDVTR 8 1 1 Unmodified _KPQLDVTR_ 0 0 0 1 Q15050 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 478.7799 2 478.779816 955.545079 NaN NaN NaN -0.41166 -0.0001971 NaN NaN NaN NaN 74.975 1.352 74.975 73.938 75.29 0 0 0 0 0.015068 1 38419 49.536 12.377 1 NaN NaN 0 13958000 13958000 0 3167 1068 1620 1796 5148 5148 KPRPSEGDEDCLPASK 16 2 1 Unmodified _KPRPSEGDEDCLPASK_ 0 0 0 2 Q5VU10;P78346 Q5VU10 Q5VU10 RPP30 Ribonuclease P protein subunit p30 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 596.2869 3 595.952714 1784.83631 79649.97 0.62168 0.00037049 -0.32075 -0.00019115 0.30093 0.00017934 596.287065943011 604.631158057536 82.864 0.28416 82.864 82.726 83.01 0 68 26 4 0 0 0 0.0023839 1 44339 39.338 19.499 1 1.5931 1.8642 0 27905000 9993400 17912000 3168 1026 1621 1797 5149 5149 KPRPSEGDEDCLPASK 16 2 1 Phospho (STY) _KPRPS(ph)EGDEDCLPASK_ KPRPS(1)EGDEDCLPASK KPRPS(62.84)EGDEDCLPAS(-62.84)K 0 0 1 2 Q5VU10;P78346 Q5VU10 Q5VU10 RPP30 Ribonuclease P protein subunit p30 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 622.6097 3 622.608157 1864.80264 75862.37 0.36356 0.00022635 -0.067921 -4.2288E-05 0.29564 0.00018407 622.6088852363 631.28692326338 22.617 0.65012 22.617 22.189 22.839 0 203 34 10 0 0 0 9.0072E-06 1 9189 70.094 61.092 2 1.0525 0.86979 0 44114000 20540000 23574000 3169 1026 1621 1798 5150 5150 1853 KPSAPSPPDQTPEEDLVIVK 20 2 0 Phospho (STY) _KPSAPS(ph)PPDQTPEEDLVIVK_ KPS(0.232)APS(0.764)PPDQT(0.004)PEEDLVIVK KPS(-5.18)APS(5.18)PPDQT(-22.96)PEEDLVIVK 0 0 1 1 A0A024RCK7;Q15776 A0A024RCK7 A0A024RCK7 ZNF192;ZKSCAN8 Zinc finger protein with KRAB and SCAN domains 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 743.3693 3 743.034641 2226.0821 70329.53 1.0567 0.0007852 -0.073268 -5.4441E-05 0.98347 0.00073076 743.368862154151 748.711683029365 106.03 0.65481 106.03 105.69 106.34 0 308 44 9 0 0 0 1.0776E-10 2 61452 74.819 74.819 3 0.33777 0.43103 0 88193000 65002000 23192000 3170 212 1622 1799 5151;5152 5151 330 KPSAPSPPDQTPEEDLVIVK 20 2 0 Phospho (STY) _KPSAPS(ph)PPDQTPEEDLVIVK_ KPS(0.187)APS(0.74)PPDQT(0.072)PEEDLVIVK KPS(-5.96)APS(5.96)PPDQT(-10.09)PEEDLVIVK 0 0 1 1 A0A024RCK7;Q15776 A0A024RCK7 A0A024RCK7 ZNF192;ZKSCAN8 Zinc finger protein with KRAB and SCAN domains 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1114.551 2 1114.04832 2226.0821 60219.7 0.6153 0.00068548 0.050444 5.6197E-05 0.66575 0.00074168 1114.04824081659 1122.06175068366 106.04 0.48009 106.04 105.76 106.24 0 110 32 6 0 0 0 7.973E-05 1 61546 41.621 41.621 3 0.35825 0.3937 0 14367000 9394100 4973100 3171 212 1622 1799 5153 5153 330 KPSDSVHITNDDER 14 1 1 Unmodified _KPSDSVHITNDDER_ 0 0 0 1 A6NHR9 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 544.2665 3 538.256902 1611.74888 82914.85 0.64868 0.00034916 0.87738 0.00047225 1.5261 0.00082141 538.257256303407 544.265277886116 80.314 0.624 80.314 80.061 80.685 0 181 57 6 0 0 0 0.00092037 1 42497 56.872 40.209 1 0.87792 1.0287 0 37400000 17820000 19580000 3172 429 1623 1800 5154 5154 KPSTSDDSDSNFEK 14 2 0 Unmodified _KPSTSDDSDSNFEK_ 0 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 519.8964 3 519.56188 1555.66381 86173.57 0.31171 0.00016195 -0.060102 -3.1227E-05 0.25161 0.00013073 519.561864338434 524.904652888191 61.777 0.30024 61.777 61.645 61.945 0 81 18 7 0 0 0 2.0705E-06 2 28646 85.739 77.14 1 0.83399 0.99626 0 26878000 16830000 10048000 3173 962 1624 1801 5155;5156 5156 KPSTSDDSDSNFEK 14 2 0 Unmodified _KPSTSDDSDSNFEK_ 0 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 778.84 2 778.839182 1555.66381 NaN NaN NaN 0.20083 0.00015641 NaN NaN NaN NaN 61.791 0.2514 61.791 61.662 61.913 0 0 0 0 6.8417E-08 1 28625 94.122 75.342 1 NaN NaN 0 6707700 6707700 0 3174 962 1624 1801 5157 5157 KPSVSEEVQATPNK 14 2 0 Phospho (STY) _KPS(ph)VSEEVQATPNK_ KPS(0.936)VS(0.064)EEVQATPNK KPS(11.67)VS(-11.67)EEVQAT(-35.8)PNK 0 0 1 1 Q9UKJ3 Q9UKJ3 Q9UKJ3 GPATCH8 G patch domain-containing protein 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 797.3795 2 797.379635 1592.74472 68113.93 0.88981 0.00070952 0.24549 0.00019575 1.1353 0.00090527 797.379779064664 805.393830812508 55.893 0.57283 55.893 55.612 56.185 0 179 47 6 0 0 0 0.00064758 2 23956 67.326 51.188 3 0.94079 1.1652 0 36203000 16171000 20032000 3175 1235 1625 1802 5158;5159 5158 2528 KPVDFKK 7 3 0 Unmodified _KPVDFKK_ 0 0 0 2 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;B3KNW7;B4E0F1;B4DSI8;A0A0U1RRF5;P51531;F6VDE0;A0A0U1RRG6;A0A0U1RRD6;A0A0U1RRF8;A0A0A0MSS5;F6UH26;A0A0U1RQU0;A0A0U1RR09;F6XE55;A0A0U1RQW7;A0A0U1RRN2;B1ALG1;A0A0U1RR83;A0A0U1RQX3;F6T8Q0;B1ALG2;A0A0U1RR26;B4DNT1;Q8N9Q1;B1ALF6 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 443.2841 2 431.263271 860.511988 91803.54 -0.12162 -5.2449E-05 0.00060606 2.6137E-07 -0.12101 -5.2188E-05 431.263255129232 443.284506267582 83.056 0.69257 83.056 82.546 83.239 0 193 62 4 0 0 0 0.034739 1 44293 71.877 18.526 1 0.76619 0.9704 0 87252000 50409000 36843000 3176 434;1004 1626 1803 5160 5160 KQEDFMTTMDANEEK 15 2 0 2 Oxidation (M) _KQEDFM(ox)TTM(ox)DANEEK_ KQEDFM(1)TTM(1)DANEEK KQEDFM(67.65)TTM(67.65)DANEEK 0 2 0 1 D6W5C0;K9MS24;B2ZZ89;A0A087WUZ3;Q01082 D6W5C0 D6W5C0 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 622.2683 3 616.925725 1847.75534 78857.14 0.6999 0.00043179 -0.52956 -0.0003267 0.17034 0.00010509 616.925427667322 622.268078295176 63.993 0.27438 63.993 63.867 64.142 0 49 18 5 0 0 0 0.00049951 1 30332 67.646 67.646 1 3.4633 3.9771 0 19743000 6465100 13278000 3177 250 1627 1804 5161 5161 62;63 KQEEGAEIQCEAETGGTHK 19 2 0 Unmodified _KQEEGAEIQCEAETGGTHK_ 0 0 0 1 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 701.6539 3 701.320013 2100.93821 72761.71 0.97549 0.00068413 -0.31082 -0.00021799 0.66467 0.00046614 701.654009556058 706.662714072816 76.399 0.72289 76.399 76.156 76.879 0 245 61 7 0 0 0 3.7173E-14 2 39454 88.283 83.666 1 0.66857 0.82059 0 33600000 21508000 12092000 3178 27 1628 1805 5162;5163 5162 KQEGPATQVDSAVGTLPATSPQSTSVQAK 29 2 0 Phospho (STY) _KQEGPATQVDSAVGTLPATS(ph)PQSTSVQAK_ KQEGPATQVDS(0.001)AVGT(0.003)LPAT(0.232)S(0.546)PQS(0.111)T(0.054)S(0.054)VQAK KQEGPAT(-32.75)QVDS(-30.22)AVGT(-23.25)LPAT(-3.71)S(3.71)PQS(-6.93)T(-10.06)S(-10.06)VQAK 0 0 1 1 J3KQ96;E7ETY2;B4DRA2 J3KQ96 J3KQ96 TCOF1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 994.1642 3 988.483435 2962.42847 61028.34 0.67738 0.00066958 -0.24131 -0.00023853 0.43607 0.00043104 988.817838101401 994.160250093474 94.322 1.5498 94.322 93.742 95.292 0 894 126 11 0 0 0 3.9012E-08 1 52547 43.835 43.835 8 0.70703 0.93015 0 260410000 144640000 115770000 3179 792 1629 1806 5164 5164 1349 KQELLEALTK 10 2 0 Unmodified _KQELLEALTK_ 0 0 0 1 B4DE32;B1AHC9;B2RDN9;A0A024R1N4;P12956;B4E356;Q6IC76 B4DE32 B4DE32 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 586.8484 2 586.847896 1171.68124 81218.89 0.9082 0.00053298 -0.22604 -0.00013265 0.68216 0.00040033 586.847685293896 594.861974369643 125.64 1.2551 125.64 125.26 126.51 0 304 111 4 0 0 0 1.7508E-07 1 76279 127.42 127.42 1 0.37342 0.41402 0 15318000 10424000 4893500 3180 50 1630 1807 5165 5165 KQELLEALTK 10 2 0 Unmodified _KQELLEALTK_ 0 0 0 1 B4DE32;B1AHC9;B2RDN9;A0A024R1N4;P12956;B4E356;Q6IC76 B4DE32 B4DE32 XRCC6;G22P1 X-ray repair cross-complementing protein 6 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 586.8493 2 586.847896 1171.68124 NaN NaN NaN 0.090058 5.285E-05 NaN NaN NaN NaN 124.23 0.44138 124.23 123.96 124.4 7.6294E-06 0 0 0 0.009331 1 75334 60.342 30.176 1 NaN NaN 0 4111400 4111400 0 3181 50 1630 1807 5166 5166 KQELLEALTK 10 2 0 Unmodified _KQELLEALTK_ 0 0 0 1 B4DE32;B1AHC9;B2RDN9;A0A024R1N4;P12956;B4E356;Q6IC76 B4DE32 B4DE32 XRCC6;G22P1 X-ray repair cross-complementing protein 6 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 586.8483 2 586.847896 1171.68124 NaN NaN NaN 0.016837 9.8806E-06 NaN NaN NaN NaN 125.22 0.85391 125.22 124.4 125.26 0 0 0 0 2.0995E-06 1 75800 91.658 55.263 1 NaN NaN 0 5679400 5679400 0 3182 50 1630 1807 5167 5167 KQELLEALTK 10 2 0 Unmodified _KQELLEALTK_ 0 0 0 1 B4DE32;B1AHC9;B2RDN9;A0A024R1N4;P12956;B4E356;Q6IC76 B4DE32 B4DE32 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 594.8625 2 586.847896 1171.68124 NaN NaN NaN NaN NaN NaN NaN NaN NaN 124.46 1 124.46 123.96 124.96 -7.6294E-06 0 0 0 0.018835 1 75448 61.161 21.857 1 3183 50 1630 1807 5168 5168 KQEQLTPGVVYVR 13 1 1 Unmodified _KQEQLTPGVVYVR_ 0 0 0 1 Q9BYG3;B4DSM4 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 506.2876 3 506.287586 1515.84093 NaN NaN NaN -0.32422 -0.00016415 NaN NaN NaN NaN 108.68 0.79394 108.68 108.28 109.07 0 0 0 0 0.0024944 1 63462 46.481 34.504 1 NaN NaN 0 14487000 14487000 0 3184 1201 1631 1808 5169 5169 KQEQLTPGVVYVR 13 1 1 Unmodified _KQEQLTPGVVYVR_ 0 0 0 1 Q9BYG3;B4DSM4 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 758.9272 2 758.92774 1515.84093 NaN NaN NaN -0.4822 -0.00036596 NaN NaN NaN NaN 108.5 0.21709 108.5 108.4 108.61 7.6294E-06 0 0 0 0.028529 1 63632 33.866 22 1 NaN NaN 0 3349100 3349100 0 3185 1201 1631 1808 5170 5170 KQISNLQQSISDAEQR 16 1 1 Unmodified _KQISNLQQSISDAEQR_ 0 0 0 1 H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRG2 H6VRG3;H6VRG2 H6VRG2 KRT1 Keratin, type II cytoskeletal 1 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 615.6557 3 615.653544 1843.9388 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.476 1 66.476 65.976 66.976 0 0 0 0 0.025108 1 41561 32.858 25.801 1 + 3186 876;877 1632 1809 5171 5171 KQPPKEPSEVPTPK 14 3 0 Phospho (STY) _KQPPKEPSEVPT(ph)PK_ KQPPKEPS(0.047)EVPT(0.953)PK KQPPKEPS(-13.07)EVPT(13.07)PK 0 0 1 2 Q5T6U8;Q6IPL9 Q5T6U8 Q5T6U8 HMGA1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 547.9465 3 547.946439 1640.81749 82116.7 0.3262 0.00017874 -0.010011 -5.4853E-06 0.31619 0.00017326 547.946423154063 555.96062021871 73.488 0.81949 73.488 73.108 73.927 0 239 70 5 0 0 0 5.2334E-05 2 37377 72.801 72.801 2 0.34446 0.43627 0 51478000 32333000 19145000 3187 1105 1633 1810 5172;5173 5173 2947 KQPPKEPSEVPTPK 14 3 0 Phospho (STY) _KQPPKEPSEVPT(ph)PK_ KQPPKEPS(0.022)EVPT(0.978)PK KQPPKEPS(-16.47)EVPT(16.47)PK 0 0 1 2 Q5T6U8;Q6IPL9 Q5T6U8 Q5T6U8 HMGA1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 547.9468 3 547.946439 1640.81749 81928.77 0.36234 0.00019854 0.42832 0.00023469 0.79066 0.00043324 547.946683041716 555.960688578994 24.108 1.2342 24.108 23.603 24.838 0 354 68 8 0 0 0 4.8757E-18 1 10484 111.45 111.45 2 0.13736 0.12325 0 30068000 26354000 3714500 3188 1105 1633 1810 5174 5174 2947 KQPPKEPSEVPTPK 14 3 0 Unmodified _KQPPKEPSEVPTPK_ 0 0 0 2 Q5T6U8;Q6IPL9 Q5T6U8 Q5T6U8 HMGA1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 529.305 3 521.290996 1560.85116 82115.08 0.37548 0.00019574 -0.0079098 -4.1233E-06 0.36757 0.00019161 521.290947885982 529.305124065489 86.191 4.4632 86.191 83.32 87.783 0 1245 421 5 0 0 0 1.1163E-33 5 46389 139.66 125.94 1 0.78012 0.98805 0 168950000 96525000 72420000 3189 1105 1633 1811 5175;5176;5177;5178;5179 5178 KQPPKEPSEVPTPK 14 3 0 Unmodified _KQPPKEPSEVPTPK_ 0 0 0 2 Q5T6U8;Q6IPL9 Q5T6U8 Q5T6U8 HMGA1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 521.291 3 521.290996 1560.85116 82753.95 0.20681 0.00010781 0.21031 0.00010963 0.41712 0.00021744 521.625393765327 529.305269952595 22.231 1.1578 22.231 21.815 22.973 -1.9073E-06 317 63 7 0 0 0 0.00059916 2 8736 66.246 66.246 1 0.40161 0.36079 0 28155000 20874000 7281500 3190 1105 1633 1811 5180;5181 5181 KQPPVSPGTALVGSQK 16 2 0 Phospho (STY) _KQPPVS(ph)PGTALVGSQK_ KQPPVS(1)PGTALVGSQK KQPPVS(36.2)PGT(-36.2)ALVGS(-131.06)QK 0 0 1 1 P17096;B4DWA0;A0A024RCT9 P17096 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 558.6259 3 558.625588 1672.85494 80101.23 0.81223 0.00045373 -0.17084 -9.5433E-05 0.64139 0.0003583 558.625475232206 563.968284305058 80.445 1.7302 80.445 79.633 81.363 -7.6294E-06 814 158 8 0 0 0 2.7072E-102 2 42601 194.7 183.44 3 0.28367 0.36965 0 185740000 137880000 47864000 3191 968 1634 1812 5182;5183 5182 1720 KQPPVSPGTALVGSQK 16 2 0 Phospho (STY) _KQPPVS(ph)PGTALVGSQK_ KQPPVS(0.984)PGT(0.015)ALVGS(0.001)QK KQPPVS(18.24)PGT(-18.24)ALVGS(-30.48)QK 0 0 1 1 P17096;B4DWA0;A0A024RCT9 P17096 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 837.4354 2 837.434744 1672.85494 67144.73 0.89466 0.00074922 -0.14848 -0.00012434 0.74618 0.00062488 837.434549379897 845.448861203226 80.488 1.4101 80.488 79.812 81.222 0 531 127 5 0 0 0 0.00012455 1 42872 48.177 48.177 3 0.25468 0.32422 0 80934000 62831000 18103000 3192 968 1634 1812 5184 5184 1720 KQPPVSPGTALVGSQK 16 2 0 Unmodified _KQPPVSPGTALVGSQK_ 0 0 0 1 P17096;B4DWA0;A0A024RCT9 P17096 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 537.3134 3 531.970145 1592.88861 83166.87 1.0352 0.00055068 -0.1423 -7.57E-05 0.89287 0.00047498 531.970041495568 537.312765155842 91.524 0.80199 91.524 91.046 91.848 0 314 66 9 0 0 0 2.1166E-51 2 50641 148.41 148.41 1 0.78457 1.0269 0 217260000 124250000 93005000 3193 968 1634 1813 5185;5186 5185 KQPPVSPGTALVGSQK 16 2 0 Unmodified _KQPPVSPGTALVGSQK_ 0 0 0 1 P17096;B4DWA0;A0A024RCT9 P17096 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 537.3125 3 531.970145 1592.88861 NaN NaN NaN -0.2756 -0.00014661 NaN NaN NaN NaN 90.948 0.28065 90.948 90.765 91.046 0 0 0 0 1.1523E-07 1 50033 77.191 62.839 1 NaN NaN 0 10850000 0 10850000 3194 968 1634 1813 5187 5187 KQPPVSPGTALVGSQK 16 2 0 Unmodified _KQPPVSPGTALVGSQK_ 0 0 0 1 P17096;B4DWA0;A0A024RCT9 P17096 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 537.3118 3 531.970145 1592.88861 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.239 1 89.239 88.739 89.739 0 0 0 0 0.0054074 1 48853 40.493 29.388 1 3195 968 1634 1813 5188 5188 KQPPVSPGTALVGSQK 16 2 0 Unmodified _KQPPVSPGTALVGSQK_ 0 0 0 1 P17096;B4DWA0;A0A024RCT9 P17096 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 531.9703 3 531.970145 1592.88861 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.906 1 90.906 90.406 91.406 0 0 0 0 6.4876E-06 1 50104 101.08 86.818 1 3196 968 1634 1813 5189 5189 KQPPVSPGTALVGSQK 16 2 0 Unmodified _KQPPVSPGTALVGSQK_ 0 0 0 1 P17096;B4DWA0;A0A024RCT9 P17096 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 531.9705 3 531.970145 1592.88861 84918.67 1.0917 0.00058078 -0.46051 -0.00024498 0.63124 0.0003358 531.969867442092 537.312788997189 58.744 1.1213 58.744 58.186 59.307 -3.8147E-06 301 102 5 0 0 0 4.6922E-05 3 36526 53.779 53.779 1 0.36212 0.29607 0 14103000 9009600 5093700 3197 968 1634 1813 5190;5191;5192 5192 KQSEELQSVQAQEGALGTK 19 2 0 Phospho (STY) _KQS(ph)EELQSVQAQEGALGTK_ KQS(1)EELQSVQAQEGALGTK KQS(46.17)EELQS(-46.17)VQAQEGALGT(-95.73)K 0 0 1 1 Q9BU64 Q9BU64 Q9BU64 CENPO Centromere protein O MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1064.0183 2 1056.00445 2109.99434 60513.38 0.46306 0.00048899 0.11288 0.0001192 0.57594 0.00060819 1056.50581194662 1064.52061271195 76.585 0.76884 76.585 76.233 77.002 0 299 64 6 0 0 0 4.516E-18 2 39521 98.439 89.152 3 0.69071 0.86444 0 44147000 27263000 16884000 3198 1196 1635 1814 5193;5194 5194 2375 KQSEELQSVQAQEGALGTK 19 2 0 Phospho (STY) _KQS(ph)EELQSVQAQEGALGTK_ KQS(0.999)EELQS(0.001)VQAQEGALGTK KQS(28.48)EELQS(-28.48)VQAQEGALGT(-72.74)K 0 0 1 1 Q9BU64 Q9BU64 Q9BU64 CENPO Centromere protein O MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 704.6734 3 704.338724 2109.99434 75111.22 0.97097 0.00068389 -0.18668 -0.00013149 0.78429 0.00055241 704.672883836929 709.681457091002 76.627 0.44342 76.627 76.328 76.771 0 88 37 4 0 0 0 2.8115E-10 1 39610 73.057 68.18 3 0.5772 0.68048 0 24112000 12331000 11781000 3199 1196 1635 1814 5195 5195 2375 KQSFDDNDSEELEDK 15 2 0 Phospho (STY) _KQSFDDNDS(ph)EELEDK_ KQS(0.001)FDDNDS(0.999)EELEDK KQS(-32.95)FDDNDS(32.95)EELEDK 0 0 1 1 A0JLR8;Q05CQ1;Q8N5A0;A0A087WUT6;O60841 A0JLR8 A0JLR8 EIF5B Eukaryotic translation initiation factor 5B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 947.8832 2 939.867483 1877.72041 64303.26 0.73782 0.00069345 -0.19855 -0.00018661 0.53927 0.00050685 939.867059397745 947.881382482689 64.367 0.40666 64.367 64.156 64.563 0 103 28 5 0 0 0 1.6945E-05 2 30566 77.795 69.454 2 0.80688 0.91448 0 17953000 10983000 6970000 3200 248 1636 1815 5196;5197 5197 392 KQSSDYEELIQVLK 14 2 0 Phospho (STY) _KQS(ph)SDYEELIQVLK_ KQS(0.784)S(0.19)DY(0.026)EELIQVLK KQS(6.15)S(-6.15)DY(-14.72)EELIQVLK 0 0 1 1 Q6MZT4;Q7Z3M0;A0A0A0MRG9;Q5CZA0;B7ZLE9;A6H8X1;B9EG74;Q66GT8;B3KVI2;A0A0C4ZLW1;Q96SN8;F8WCI3 Q6MZT4 Q6MZT4 DKFZp686E2242;DKFZp686M1993;CDK5RAP2;DKFZp686D1070 CDK5 regulatory subunit-associated protein 2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 888.4445 2 880.429325 1758.8441 NaN NaN NaN 0.17102 0.00015057 NaN NaN NaN NaN 126.98 0.93195 126.98 126.48 127.41 0 0 0 0 0.0051605 1 77048 47.774 33.539 3 NaN NaN 0 4233300 0 4233300 3201 286 1637 1816 5198 5198 447 KQSSDYEELIQVLK 14 2 0 Phospho (STY) _KQS(ph)SDYEELIQVLK_ KQS(0.737)S(0.145)DY(0.119)EELIQVLK KQS(7.06)S(-7.06)DY(-7.93)EELIQVLK 0 0 1 1 Q6MZT4;Q7Z3M0;A0A0A0MRG9;Q5CZA0;B7ZLE9;A6H8X1;B9EG74;Q66GT8;B3KVI2;A0A0C4ZLW1;Q96SN8;F8WCI3 Q6MZT4 Q6MZT4 DKFZp686E2242;DKFZp686M1993;CDK5RAP2;DKFZp686D1070 CDK5 regulatory subunit-associated protein 2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 880.4296 2 880.429325 1758.8441 NaN NaN NaN NaN NaN NaN NaN NaN NaN 127.6 1 127.6 127.1 128.1 -7.6294E-06 0 0 0 0.0014839 1 77432 47.559 33.401 3 3202 286 1637 1816 5199 5199 447 KREDSAPPSSVAR 13 1 2 Unmodified _KREDSAPPSSVAR_ 0 0 0 2 Q53GS0;D2CFK9;Q9BZE4;Q8N4P8;B4DHR2 Q53GS0 Q53GS0 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 467.2479 3 467.24779 1398.72154 86455.28 0.42239 0.00019736 -0.015628 -7.3022E-06 0.40676 0.00019006 467.581484914021 476.59155177468 80.514 1.3742 80.514 79.812 81.186 0 551 124 7 0 0 0 0.0053009 1 42557 35.763 35.763 1 1.9084 2.2466 0 157870000 63040000 94829000 3203 762 1638 1817 5200 5200 KRESESESDETPPAAPQLIK 20 2 1 2 Phospho (STY) _KRES(ph)ES(ph)ESDETPPAAPQLIK_ KRES(0.848)ES(0.831)ES(0.319)DET(0.002)PPAAPQLIK KRES(6.52)ES(6.08)ES(-6.08)DET(-30.02)PPAAPQLIK 0 0 2 2 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 800.0323 3 791.352132 2371.03457 67598.92 1.0539 0.00083404 -0.25151 -0.00019903 0.80243 0.00063501 791.686335714568 800.030707463004 94.934 1.3194 94.934 94.647 95.966 -7.6294E-06 806 113 11 0 0 0 2.5791E-08 3 53588 62.646 55.036 6 0.48586 0.57696 0 459790000 302020000 157770000 3204 931 1639 1818 5201;5202;5203 5202 1582;1583;1584;2848 KRESESESDETPPAAPQLIK 20 2 1 2 Phospho (STY) _KRES(ph)ESESDET(ph)PPAAPQLIK_ KRES(0.56)ES(0.298)ES(0.367)DET(0.775)PPAAPQLIK KRES(2.34)ES(-3.26)ES(-2.34)DET(5.55)PPAAPQLIK 0 0 2 2 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1199.5447 2 1186.52456 2371.03457 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.854 1 94.854 94.354 95.354 0 0 0 0 0.0025194 1 53181 41.257 28.766 6 3205 931 1639 1818 5204 5204 1582;1583;1584;2848 KRPEDTAASALQEGQTQR 18 1 2 Unmodified _KRPEDTAASALQEGQTQR_ 0 0 0 2 A0A075B784;A0A024R8V6;Q9P275 A0A075B784 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 497.5773 4 497.255434 1984.99263 85763.09 0.94694 0.00047087 -0.73509 -0.00036553 0.21185 0.00010534 497.505914749026 504.262831753569 96.135 0.56503 96.135 95.979 96.544 -7.6294E-06 151 47 6 0 0 0 0.032766 1 54096 8.9866 2.0423 1 1.1776 1.3474 0 31602000 13079000 18523000 3206 157 1640 1819 5205 5205 KSDFEFTLK 9 2 0 Unmodified _KSDFEFTLK_ 0 0 0 1 Q59HG1;O95239;Q2VIQ3;B4DYE2;Q6PKB2 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 565.8076 2 557.792589 1113.57063 83548.59 0.65894 0.00036755 -0.15322 -8.5466E-05 0.50572 0.00028208 557.792328917283 565.806633723372 122.22 1.6546 122.22 121.35 123 0 350 126 4 0 0 0 0.0007902 1 73675 85.355 28.923 1 0.85778 0.92014 0 10419000 4912800 5506200 3207 944 1641 1820 5206 5206 KSDVEAIFSK 10 2 0 Unmodified _KSDVEAIFSK_ 0 0 0 1 G3V576;G3V4W0;B4DY08;B2R5W2;G3V4C1;B2R603;G3V2Q1;A8K9A4;P07910;G3V4M8;G3V5X6;G3V3K6;G3V251;B4DMJ1;B4DSU6;G3V555;G3V575;Q6PKD2;B3KX96;A0A0G2JPF8;A0A0G2JNQ3;P0DMR1;O60812;B7ZW38;B2RXH8;G3V2H6;Q569J8;D3DPI2 G3V576 G3V576 HNRNPC;HNRPCL1;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2;HNRPC;hCG_1641229 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 562.3036 2 562.303321 1122.59209 81138.93 0.75221 0.00042297 -0.17919 -0.00010076 0.57301 0.00032221 562.303100980585 570.317375484715 108.68 1.506 108.68 108.02 109.53 7.6294E-06 677 119 8 0 0 0 3.86E-40 4 64090 172.21 93.445 1 1.0945 1.4309 0 208290000 95893000 112400000 3208 503 1642 1821 5207;5208;5209;5210 5210 KSDVETIFSK 10 2 0 Unmodified _KSDVETIFSK_ 0 0 0 1 A8K4T9;Q53GL6;Q5QPM1;Q5QPL9;Q9UKM9;Q5QPM2;B4DSJ1 A8K4T9 A8K4T9 RALY RNA-binding protein Raly MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 577.2932 2 577.308603 1152.60265 81144.46 0.66146 0.00038187 -0.27804 -0.00016052 0.38342 0.00022135 577.308525435794 585.322318805681 106.82 1.0362 106.82 106.32 107.35 0 254 82 4 0 0 0 0.012316 1 62408 47.894 5.5453 1 0.97271 1.1851 0 31610000 14548000 17062000 3209 465 1643 1822 5211 5211 KSPEGLISR 9 1 1 Phospho (STY) _KS(ph)PEGLISR_ KS(1)PEGLISR KS(42.29)PEGLIS(-42.29)R 0 0 1 1 A0A075B784;A0A024R8V6;Q9P275;B3KMW2;K7EMM6;Q9H9C5;E9PEW0 A0A075B784 A0A075B784 USP36;DUB1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 533.768 2 533.768264 1065.52197 81754.88 0.78805 0.00042064 -0.040652 -2.1699E-05 0.7474 0.00039894 533.768233198008 542.779478167317 36.181 1.3397 36.181 35.78 37.119 0 596 110 8 0 0 0 0.0026768 1 20229 63.864 13.412 2 1.3609 1.0524 0 276060000 114230000 161830000 3210 157 1644 1823 5212 5212 242 KSPQEPTPSVIK 12 2 0 Phospho (STY) _KS(ph)PQEPTPSVIK_ KS(1)PQEPTPSVIK KS(46.93)PQEPT(-46.93)PS(-57.04)VIK 0 0 1 1 A0A024R997;A0A024R9C2;Q8IXL1;P28324 A0A024R997 A0A024R997 ELK4 ETS domain-containing protein Elk-4 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 695.8538 2 695.852525 1389.6905 NaN NaN NaN 0.16794 0.00011686 NaN NaN NaN NaN 67.605 0.29721 67.605 67.446 67.743 0 0 0 0 0.0017124 1 33234 78.814 53.961 3 NaN NaN 0 7865200 7865200 0 3211 159 1645 1824 5213 5213 250 KSPVGKSPPSTGSTYGSSQK 20 3 0 2 Phospho (STY) _KS(ph)PVGKS(ph)PPSTGSTYGSSQK_ KS(1)PVGKS(0.998)PPS(0.002)TGSTYGSSQK KS(64.78)PVGKS(27.46)PPS(-27.46)T(-33.66)GS(-45.33)T(-50.76)Y(-50.53)GS(-55.9)S(-59.96)QK 0 0 2 2 Q9Y2W1;Q7Z5U1;Q05D20;Q6P0P7;Q6PJV4 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 721.9982 3 713.983491 2138.92864 71599.64 0.8085 0.00057726 0.040827 2.9149E-05 0.84933 0.0006064 714.317762557773 721.997748488232 46.209 1.1181 46.209 45.736 46.854 0 607 81 10 0 0 0 3.9591E-14 1 17600 84.365 74.707 36 1.2241 1.5504 0 86613000 37597000 49016000 3212 1248 1646 1825 5214 5214 2569;2570 KSPVGKSPPSTGSTYGSSQK 20 3 0 Phospho (STY) _KSPVGKS(ph)PPSTGSTYGSSQK_ KSPVGKS(0.964)PPS(0.015)T(0.004)GS(0.005)T(0.007)YGS(0.002)S(0.002)QK KS(-41.43)PVGKS(18.03)PPS(-18.03)T(-23.69)GS(-22.9)T(-21.25)Y(-36.58)GS(-26.9)S(-26.11)QK 0 0 1 2 Q9Y2W1;Q7Z5U1;Q05D20;Q6P0P7;Q6PJV4 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 695.6771 3 687.328048 2058.96231 72806.54 0.37748 0.00025945 0.50141 0.00034463 0.87889 0.00060408 687.328512122871 695.342645638586 22.418 0.93098 22.418 21.846 22.777 1.9073E-06 324 50 10 0 0 0 6.8469E-09 1 8951 66.793 55.136 9 0.95158 0.84536 0 51841000 26224000 25617000 3213 1248 1646 1826 5215 5215 2569;2570 KSTPKEETVNDPEEAGHR 18 2 1 Phospho (STY) _KST(ph)PKEETVNDPEEAGHR_ KS(0.006)T(0.994)PKEETVNDPEEAGHR KS(-22.06)T(22.06)PKEET(-37.17)VNDPEEAGHR 0 0 1 2 A8K9K6;O00567;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 702.3178 3 701.98294 2102.92699 71549.41 0.99613 0.00069926 0.36881 0.0002589 1.3649 0.00095816 701.983016454565 710.662030566343 17.141 0.37864 17.141 16.996 17.374 0 53 12 9 0 0 0 1.1726E-53 2 4397 155.71 145.09 3 0.73694 0.60571 0 62409000 35289000 27121000 3214 504 1647 1827 5216;5217 5217 865;2753 KSTPKEETVNDPEEAGHR 18 2 1 Phospho (STY) _KST(ph)PKEETVNDPEEAGHR_ KS(0.046)T(0.93)PKEET(0.025)VNDPEEAGHR KS(-13.1)T(13.1)PKEET(-15.79)VNDPEEAGHR 0 0 1 2 A8K9K6;O00567;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 533.2489 4 526.739024 2102.92699 81982.53 0.81944 0.00043163 0.50474 0.00026587 1.3242 0.0006975 526.739179287474 533.248743763478 17.158 0.32969 17.158 16.969 17.298 -1.9073E-06 60 10 10 0 0 0 8.2153E-24 1 4370 112.91 91.381 3 0.77174 0.63866 0 40432000 22641000 17792000 3215 504 1647 1827 5218 5218 865;2753 KTDAPQPDVKEEEEEK 16 3 0 Unmodified _KTDAPQPDVKEEEEEK_ 0 0 0 2 P27824 P27824 P27824 CANX Calnexin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 632.6485 3 624.633815 1870.87962 78365.71 0.69296 0.00043284 -0.23151 -0.00014461 0.46144 0.00028823 624.633617572646 632.647827574918 72.29 0.28967 72.29 72.136 72.426 0 78 23 5 0 0 0 1.2316E-09 2 36504 85.563 73.362 1 0.79114 1.002 0 32472000 16827000 15645000 3216 979 1648 1828 5219;5220 5220 KTDAPQPDVKEEEEEKEEEK 20 4 0 Unmodified _KTDAPQPDVKEEEEEKEEEK_ 0 0 0 3 P27824 P27824 P27824 CANX Calnexin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 597.7841 4 597.532866 2386.10236 76406.48 0.72592 0.00043376 0.36931 0.00022067 1.0952 0.00065444 597.783342874285 605.546767263315 79.141 1.4884 79.141 78.372 79.86 0 793 134 8 0 0 0 1.0341E-36 6 41737 123.39 110.72 1 1.0503 1.4165 0 117220000 56776000 60440000 3217 979 1649 1829 5221;5222;5223;5224;5225;5226 5223 KTESPIKLSPATPSR 15 2 1 2 Phospho (STY) _KT(ph)ESPIKLS(ph)PATPSR_ KT(0.572)ES(0.428)PIKLS(0.982)PAT(0.014)PS(0.004)R KT(1.28)ES(-1.28)PIKLS(18.53)PAT(-18.53)PS(-23.26)R 0 0 2 2 Q9Y6X9 Q9Y6X9 Q9Y6X9 MORC2 MORC family CW-type zinc finger protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 591.2854 3 591.284554 1770.83183 77462.56 0.84836 0.00050162 -0.075182 -4.4454E-05 0.77318 0.00045717 591.284526128221 599.963463227077 61.782 1.9904 61.782 61.035 63.025 0 991 185 7 0 0 0 0.00048572 1 38753 50.776 42.801 10 1.0439 0.8553 0 76274000 34824000 41450000 3218 1257 1650 1830 5227 5227 2591;2592;3009 KTPLALAGSPTPK 13 2 0 Phospho (STY) _KTPLALAGS(ph)PTPK_ KTPLALAGS(0.967)PT(0.033)PK KT(-51.74)PLALAGS(14.69)PT(-14.69)PK 0 0 1 1 B9EGQ5;M0QXA7;O95785 B9EGQ5 B9EGQ5 WIZ Protein Wiz ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 688.8798 2 680.865435 1359.71632 NaN NaN NaN 0.17141 0.00011671 NaN NaN NaN NaN 86.065 0.14311 86.065 85.97 86.113 0 0 0 0 0.0019673 1 46554 71.98 51.676 3 NaN NaN 0 6525500 0 6525500 3219 731 1651 1831 5228 5228 1212 KTPLALAGSPTPK 13 2 0 Phospho (STY) _KTPLALAGS(ph)PTPK_ KTPLALAGS(0.944)PT(0.056)PK KT(-47.33)PLALAGS(12.31)PT(-12.31)PK 0 0 1 1 B9EGQ5;M0QXA7;O95785 B9EGQ5 B9EGQ5 WIZ Protein Wiz MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 688.8799 2 680.865435 1359.71632 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.794 1 86.794 86.294 87.294 0 0 0 0 0.00022064 1 47093 60.657 43.221 3 3220 731 1651 1831 5229 5229 1212 KTPLALAGSPTPK 13 2 0 Phospho (STY) _KTPLALAGS(ph)PTPK_ KTPLALAGS(0.941)PT(0.059)PK KT(-56.81)PLALAGS(12.05)PT(-12.05)PK 0 0 1 1 B9EGQ5;M0QXA7;O95785 B9EGQ5 B9EGQ5 WIZ Protein Wiz MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 681.3664 2 680.865435 1359.71632 73603.61 0.95386 0.00064945 -0.061476 -4.1857E-05 0.89238 0.00060759 680.865309674538 688.879627494996 71.996 1.0475 71.996 71.439 72.486 0 588 97 9 0 0 0 0.00048018 3 45392 71.781 59.734 3 1.7117 1.2803 0 100570000 36268000 64300000 3221 731 1651 1831 5230;5231;5232 5231 1212 KTPPAPSPFDLPELK 15 2 0 2 Phospho (STY) _KT(ph)PPAPS(ph)PFDLPELK_ KT(1)PPAPS(1)PFDLPELK KT(63.58)PPAPS(63.58)PFDLPELK 0 0 2 1 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 599.6143 3 599.6139 1795.81987 77720.74 0.69032 0.00041393 -0.00012532 -7.5144E-08 0.6902 0.00041385 599.613916625931 604.956578356422 121.31 1.1214 121.31 120.83 121.95 7.6294E-06 573 86 10 0 0 0 0.00093768 4 72954 63.578 51.899 1 0.55719 0.7252 0 177730000 114950000 62783000 3222 944 1652 1832 5233;5234;5235;5236 5234 1631;2859 KTPPAPSPFDLPELK 15 2 0 2 Phospho (STY) _KT(ph)PPAPS(ph)PFDLPELK_ KT(1)PPAPS(1)PFDLPELK KT(67.87)PPAPS(67.87)PFDLPELK 0 0 2 1 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 604.9575 3 599.6139 1795.81987 78493.32 0.93746 0.00056211 -0.2197 -0.00013174 0.71776 0.00043038 599.613633171464 604.956612991496 129.01 1.0573 129.01 128.43 129.48 0 567 93 8 0 0 0 0.00053236 1 83454 67.866 60.327 1 0.90024 0.73486 0 13952000 8023900 5928100 3223 944 1652 1832 5237 5237 1631;2859 KTPPAPSPFDLPELK 15 2 0 Phospho (STY) _KT(ph)PPAPSPFDLPELK_ KT(1)PPAPSPFDLPELK KT(61.81)PPAPS(-61.81)PFDLPELK 0 0 1 1 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 858.9347 2 858.934046 1715.85354 65326.55 0.68836 0.00059125 -0.036755 -3.157E-05 0.6516 0.00055968 858.934098543172 866.948265649082 121.63 1.8755 121.63 121.01 122.88 0 931 143 9 0 0 0 2.8752E-41 5 73645 151.31 103.69 2 0.93463 1.2094 0 144590000 77543000 67043000 3224 944 1652 1833 5238;5239;5240;5241;5242 5241 1631;2859 KTPPAPSPFDLPELK 15 2 0 Phospho (STY) _KT(ph)PPAPSPFDLPELK_ KT(0.696)PPAPS(0.304)PFDLPELK KT(3.59)PPAPS(-3.59)PFDLPELK 0 0 1 1 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 572.9589 3 572.958456 1715.85354 79504.1 0.48661 0.00027881 -0.047974 -2.7487E-05 0.43864 0.00025132 572.958461768703 578.301129493021 121.68 2.2589 121.68 120.95 123.21 0 1263 178 10 0 0 0 0.00023198 5 73664 62.966 53.684 2 0.89908 1.185 0 277720000 147440000 130280000 3225 944 1652 1833 5243;5244;5245;5246;5247 5245 1631;2859 KTPPAPSPFDLPELK 15 2 0 Phospho (STY) _KT(ph)PPAPSPFDLPELK_ KT(1)PPAPSPFDLPELK KT(40.88)PPAPS(-40.88)PFDLPELK 0 0 1 1 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 866.9498 2 858.934046 1715.85354 66348.31 1.129 0.00096977 0.39969 0.0003433 1.5287 0.0013131 858.934283555912 866.948527133896 121.93 0.81052 121.93 121.67 122.48 0 644 74 12 0 0 0 0.0017195 1 78687 58.159 30.823 2 0.98422 0.73589 0 103780000 51440000 52338000 3226 944 1652 1833 5248 5248 1631;2859 KTPSKPPAQLSPSVPK 16 3 0 Phospho (STY) _KTPSKPPAQLS(ph)PSVPK_ KTPS(0.002)KPPAQLS(0.836)PS(0.162)VPK KT(-33.02)PS(-25.48)KPPAQLS(7.13)PS(-7.13)VPK 0 0 1 2 F5H8D7;B4DTD3;B2RCY5;A0A024R0S8;Q59HH7;P18887;M0QYS5;B4DEB2 F5H8D7 F5H8D7 XRCC1 DNA repair protein XRCC1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 581.3132 3 581.313122 1740.91754 NaN NaN NaN -0.1397 -8.1207E-05 NaN NaN NaN NaN 86.842 1.9831 86.842 86.134 88.117 -7.6294E-06 0 0 0 0.00017745 2 47781 48.656 34.042 4 NaN NaN 0 24860000 24860000 0 3227 33 1653 1834 5249;5250 5250 39;40 KTPSKPPAQLSPSVPK 16 3 0 Phospho (STY) _KTPSKPPAQLS(ph)PSVPK_ KTPSKPPAQLS(0.933)PS(0.067)VPK KT(-97.58)PS(-80.09)KPPAQLS(11.43)PS(-11.43)VPK 0 0 1 2 F5H8D7;B4DTD3;B2RCY5;A0A024R0S8;Q59HH7;P18887;M0QYS5;B4DEB2 F5H8D7 F5H8D7 XRCC1 DNA repair protein XRCC1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 581.314 3 581.313122 1740.91754 78736.72 0.91951 0.00053452 -0.036464 -2.1197E-05 0.88305 0.00051333 581.313211407667 589.327221411715 56.951 2.3005 56.951 55.706 58.007 0 1278 199 9 0 0 0 2.7564E-30 2 34731 121.81 121.81 4 0.7177 0.62868 0 111800000 63854000 47941000 3228 33 1653 1834 5251;5252 5251 39;40 KTPTVIHK 8 2 0 Unmodified _KTPTVIHK_ 0 0 0 1 Q53GS0;D2CFK9;Q9BZE4;Q8N4P8;O60747 Q53GS0 Q53GS0 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 470.3015 2 462.287277 922.560001 88815.91 -0.053411 -2.4691E-05 0.39226 0.00018134 0.33885 0.00015665 462.287321066178 470.301568167257 83.186 0.33862 83.186 83.085 83.424 0 100 26 6 0 0 0 0.019554 2 44645 71.501 41.316 1 0.91012 1.1551 0 72704000 36625000 36079000 3229 762 1654 1835 5253;5254 5254 KTQMAEVLPSPR 12 1 1 Oxidation (M),Phospho (STY) _KTQM(ox)AEVLPS(ph)PR_ KTQM(1)AEVLPSPR KTQMAEVLPS(1)PR KTQM(64.33)AEVLPSPR KT(-56.42)QMAEVLPS(56.42)PR 0 1 1 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 490.9096 3 484.902065 1451.68437 85046.97 0.16862 8.1764E-05 -0.23281 -0.00011289 -0.064188 -3.1125E-05 484.901978170538 490.90960430317 72.868 1.2093 72.868 72.252 73.462 0 578 100 7 0 0 0 0.0019061 1 37055 64.327 48.691 2 0.8568 1.0304 0 172290000 88974000 83314000 3230 962 1655 1836 5255 5255 269 1695 KTQMAEVLPSPR 12 1 1 Oxidation (M),Phospho (STY) _KTQM(ox)AEVLPS(ph)PR_ KTQM(1)AEVLPSPR KTQMAEVLPS(1)PR KTQM(121.13)AEVLPSPR KT(-104.78)QMAEVLPS(104.78)PR 0 1 1 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 735.8607 2 726.849459 1451.68437 NaN NaN NaN -0.31044 -0.00022564 NaN NaN NaN NaN 72.835 1.3376 72.835 72.263 73.601 0 0 0 0 3.2376E-24 1 36957 121.13 68.549 2 NaN NaN 0 129240000 0 129240000 3231 962 1655 1836 5256 5256 269 1695 KTQMAEVLPSPR 12 1 1 Oxidation (M),Phospho (STY) _KTQM(ox)AEVLPS(ph)PR_ KTQM(1)AEVLPSPR KTQMAEVLPS(1)PR KTQM(172.9)AEVLPSPR KT(-147)QMAEVLPS(147)PR 0 1 1 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 726.8502 2 726.849459 1451.68437 68725.6 0.86694 0.00063014 -0.091707 -6.6657E-05 0.77524 0.00056348 726.849624914202 735.860778507771 47.529 3.8029 47.529 44.657 48.46 0 2833 351 11 0 0 0 5.3735E-53 7 28849 172.9 150.26 2 1.2222 0.94587 0 449050000 197980000 251070000 3232 962 1655 1836 5257;5258;5259;5260;5261;5262;5263 5263 269 1695 KTQMAEVLPSPR 12 1 1 Oxidation (M),Phospho (STY) _KTQM(ox)AEVLPS(ph)PR_ KTQM(1)AEVLPSPR KTQMAEVLPS(1)PR KTQM(66.81)AEVLPSPR KT(-60.8)QMAEVLPS(60.8)PR 0 1 1 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 484.9025 3 484.902065 1451.68437 83667.83 0.47461 0.00023014 -0.19839 -9.6202E-05 0.27622 0.00013394 484.902025567208 490.909539259081 47.586 3.7241 47.586 44.761 48.485 0 2237 343 9 0 0 0 0.0015152 9 27396 66.809 45.58 2 1.2286 0.94927 0 170700000 75409000 95292000 3233 962 1655 1836 5264;5265;5266;5267;5268;5269;5270;5271;5272 5266 269 1695 KTQMAEVLPSPR 12 1 1 Oxidation (M),Phospho (STY) _KTQM(ox)AEVLPS(ph)PR_ KTQM(1)AEVLPSPR KTQMAEVLPS(1)PR KTQM(50.04)AEVLPSPR KT(-40.25)QMAEVLPS(40.25)PR 0 1 1 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 726.8505 2 726.849459 1451.68437 68725.61 0.86185 0.00062643 0.01893 1.376E-05 0.88078 0.00064019 726.849798648576 735.860710277726 48.876 2.4559 48.876 48.183 50.639 3.8147E-06 1409 233 11 0 0 0 0.013716 1 29382 50.04 50.04 2 1.1756 0.90904 0 273730000 127150000 146570000 3234 962 1655 1836 5273 5273 269 1695 KTQMAEVLPSPR 12 1 1 Oxidation (M),Phospho (STY) _KTQM(ox)AEVLPS(ph)PR_ KTQM(1)AEVLPSPR KTQMAEVLPS(1)PR KTQM(41.11)AEVLPSPR KT(-35.83)QMAEVLPS(35.83)PR 0 1 1 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 490.9093 3 484.902065 1451.68437 NaN NaN NaN NaN NaN NaN NaN NaN NaN 48.52 1 48.52 48.02 49.02 0 0 0 0 0.0042763 1 29177 41.107 20.444 2 3235 962 1655 1836 5274 5274 269 1695 KTQMAEVLPSPR 12 1 1 Oxidation (M),Phospho (STY) _KTQM(ox)AEVLPS(ph)PR_ KTQM(1)AEVLPSPR KTQMAEVLPS(1)PR KTQM(42.06)AEVLPSPR KT(-36.88)QMAEVLPS(36.88)PR 0 1 1 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 490.9096 3 484.902065 1451.68437 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.316 1 49.316 48.816 49.816 3.8147E-06 0 0 0 0.0035459 1 29710 42.059 10.258 2 3236 962 1655 1836 5275 5275 269 1695 KTQMAEVLPSPR 12 1 1 Phospho (STY) _KTQMAEVLPS(ph)PR_ KTQMAEVLPS(1)PR KT(-80.69)QMAEVLPS(80.69)PR 0 0 1 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 727.8641 2 718.852002 1435.68945 70271.39 1.0522 0.00075639 -0.060677 -4.3618E-05 0.99154 0.00071277 718.851818550209 727.863481792833 74.873 1.9161 74.873 74.294 76.21 7.6294E-06 889 170 8 0 0 0 1.9243E-07 2 47843 100.43 87.023 2 1.7692 1.3651 0 77085000 28146000 48939000 3237 962 1655 1837 5276;5277 5277 1695 KTSFDQDSDVDIFPSDFPTEPPSLPR 26 1 1 Phospho (STY) _KTS(ph)FDQDSDVDIFPSDFPTEPPSLPR_ KT(0.412)S(0.525)FDQDS(0.063)DVDIFPSDFPTEPPSLPR KT(-1.05)S(1.05)FDQDS(-9.23)DVDIFPS(-46.66)DFPT(-66.3)EPPS(-74.07)LPR 0 0 1 1 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1006.788 3 1006.45325 3016.33793 60342.05 0.18128 0.00018245 -0.13215 -0.000133 0.049135 4.9452E-05 1006.78784095391 1012.79438640059 131.98 1.7469 131.98 131.15 132.89 -1.5259E-05 1015 149 10 0 0 0 8.2803E-22 2 80462 74.81 74.81 6 0.52203 0.61274 0 39149000 24906000 14244000 3238 1032 1656 1838 5278;5279 5279 1867;1868;2907 KTSFDQDSDVDIFPSDFPTEPPSLPR 26 1 1 Phospho (STY) _KT(ph)SFDQDSDVDIFPSDFPTEPPSLPR_ KT(0.333)S(0.333)FDQDS(0.333)DVDIFPSDFPTEPPSLPR KT(0)S(0)FDQDS(0)DVDIFPS(-34.8)DFPT(-45.99)EPPS(-51.95)LPR 0 0 1 1 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1012.7964 3 1006.45325 3016.33793 59448.6 0.30876 0.00031075 0.45807 0.00046103 0.76683 0.00077177 1006.78823193413 1012.7954504543 134.4 0.40485 134.4 134.27 134.68 0 196 23 15 0 0 0 6.1079E-10 1 86688 51.956 46.95 6 0.9261 0.71607 0 257460000 130500000 126960000 3239 1032 1656 1838 5280 5280 1867;1868;2907 KTSPASLDFPESQK 14 2 0 Phospho (STY) _KTS(ph)PASLDFPESQK_ KT(0.392)S(0.607)PAS(0.001)LDFPESQK KT(-1.89)S(1.89)PAS(-27.04)LDFPES(-66.46)QK 0 0 1 1 Q96JM3 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 815.8873 2 807.874185 1613.73382 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.028 1 79.028 78.528 79.528 0 0 0 0 2.756E-07 1 41555 71.344 53.535 4 3240 1180 1657 1839 5281 5281 2323;2974 KTSPASLDFPESQK 14 2 0 Phospho (STY) _KTS(ph)PASLDFPESQK_ KT(0.234)S(0.757)PAS(0.01)LDFPESQK KT(-5.1)S(5.1)PAS(-18.98)LDFPES(-50.49)QK 0 0 1 1 Q96JM3 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 815.8881 2 807.874185 1613.73382 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.792 1 79.792 79.292 80.292 0 0 0 0 7.0765E-05 1 42127 55.975 43.019 4 3241 1180 1657 1839 5282 5282 2323;2974 KTSPASLDFPESQK 14 2 0 Phospho (STY) _KTS(ph)PASLDFPESQK_ KT(0.003)S(0.997)PASLDFPESQK KT(-25.32)S(25.32)PAS(-53.3)LDFPES(-137.24)QK 0 0 1 1 Q96JM3 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 815.8893 2 807.874185 1613.73382 66652.86 1.153 0.00093147 -0.095292 -7.6984E-05 1.0577 0.00085448 807.874186334934 815.888391739131 68.544 2.2216 68.544 67.676 69.897 0 1190 194 10 0 0 0 7.1479E-42 2 42769 155.2 130.91 4 1.6337 1.2095 0 217650000 85339000 132310000 3242 1180 1657 1839 5283;5284 5283 2323;2974 KTSPASLDFPESQK 14 2 0 Phospho (STY) _KT(ph)SPASLDFPESQK_ KT(0.654)S(0.28)PAS(0.066)LDFPESQK KT(3.68)S(-3.68)PAS(-9.99)LDFPES(-61.04)QK 0 0 1 1 Q96JM3 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 544.2618 3 538.918549 1613.73382 82435.51 0.94991 0.00051192 -0.24633 -0.00013275 0.70358 0.00037917 538.918390892879 544.261227564277 68.547 1.0697 68.547 68.046 69.116 0 466 96 7 0 0 0 0.00058449 1 43267 61.757 56.383 4 1.5698 1.2269 0 37493000 14876000 22617000 3243 1180 1657 1839 5285 5285 2323;2974 KTSSDDESEEDEDDLLQR 18 1 1 2 Phospho (STY) _KTSS(ph)DDES(ph)EEDEDDLLQR_ KT(0.329)S(0.37)S(0.419)DDES(0.882)EEDEDDLLQR KT(-1.33)S(-0.67)S(0.67)DDES(9.37)EEDEDDLLQR 0 0 2 1 Q9Y5J1;B2RAX6 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1144.9255 2 1135.9147 2269.81486 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.343 1 73.343 72.843 73.843 0 0 0 0 0.00034637 1 37347 55.437 43.271 6 3244 1255 1658 1840 5286 5286 2583;2584;2585;3008 KTSSDDESEEDEDDLLQR 18 1 1 3 Phospho (STY) _KTS(ph)S(ph)DDES(ph)EEDEDDLLQR_ KT(0.535)S(0.603)S(0.885)DDES(0.977)EEDEDDLLQR KT(-0.68)S(0.68)S(6.08)DDES(12.98)EEDEDDLLQR 0 0 3 1 Q9Y5J1;B2RAX6 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1175.8966 2 1175.89787 2349.78119 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.146 1 78.146 77.646 78.646 0 0 0 0 1.5129E-08 1 40897 76.704 63.937 4 3245 1255 1658 1841 5287 5287 2583;2584;2585;3008 KTSSDDESEEDEDDLLQR 18 1 1 3 Phospho (STY) _KTS(ph)S(ph)DDES(ph)EEDEDDLLQR_ KT(0.338)S(0.719)S(0.943)DDES(1)EEDEDDLLQR KT(-3.72)S(3.72)S(10.66)DDES(35.88)EEDEDDLLQR 0 0 3 1 Q9Y5J1;B2RAX6 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1184.9086 2 1175.89787 2349.78119 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.867 1 78.867 78.367 79.367 0 0 0 0 2.0395E-08 1 41428 78.088 65.527 4 3246 1255 1658 1841 5288 5288 2583;2584;2585;3008 KVDLTLLSPK 10 2 0 Phospho (STY) _KVDLTLLS(ph)PK_ KVDLT(0.008)LLS(0.992)PK KVDLT(-20.82)LLS(20.82)PK 0 0 1 1 E7EVA0;B5MEG9;Q86Y04 E7EVA0 E7EVA0 MAP4 Microtubule-associated protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 597.3306 2 597.330697 1192.64684 81820.28 0.6856 0.00040953 -0.088357 -5.2778E-05 0.59724 0.00035675 597.330629572868 605.344762290072 111.08 0.54939 111.08 110.79 111.34 0 96 48 4 0 0 0 0.00060152 3 65707 77.776 67.697 2 0.63 0.71305 0 17778000 10730000 7047700 3247 793 1659 1842 5289;5290;5291 5290 1360 KVDWLTEK 8 2 0 Unmodified _KVDWLTEK_ 0 0 0 1 B4DNH2;J3KSZ0;J3KT12;A8K7F6;A8K088;P60842;J3KTN0;B4DKP9;J3QS69;Q59F68;J3QL52;J3QL43;Q96B07;B4DJX6;Q9NZE6;E7EQG2;Q14240;A0A024R8W0;P38919 B4DNH2;A0A024R8W0 B4DNH2 EIF4A1;EIF4A2;DDX48;EIF4A3 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed;Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 517.7962 2 509.782025 1017.5495 86475.21 0.33416 0.00017035 -0.18663 -9.5139E-05 0.14754 7.5212E-05 509.781826134552 517.795984458847 106.69 1.1315 106.69 106.26 107.39 -7.6294E-06 270 89 4 0 0 0 0.013332 1 61987 93.598 36.877 1 1.6514 1.9268 0 22152000 8161800 13990000 3248 439;158 1660 1843 5292 5292 KVEAPETNIDK 11 2 0 Unmodified _KVEAPETNIDK_ 0 0 0 1 Q0D2N5;E9PBY7;E9PQ61;B4DLG2;O75152 Q0D2N5 Q0D2N5 ZC3H11A Zinc finger CCCH domain-containing protein 11A MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 630.345 2 622.330067 1242.64558 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.535 1 72.535 72.035 73.035 0 0 0 0 0.01645 1 36725 55.353 20.966 1 3249 638 1661 1844 5293 5293 KVEEAEPEEFVVEK 14 2 0 Unmodified _KVEEAEPEEFVVEK_ 0 0 0 1 A4D177;Q13185;C9JMM0;B8ZZ43;S4R2Y4 A4D177 A4D177 CBX3 Chromobox protein homolog 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 554.6158 3 554.613804 1660.81958 81861.49 1.3487 0.00074801 -0.4733 -0.0002625 0.8754 0.00048551 554.613620100674 559.956225511957 101.53 1.0279 101.53 101.29 102.31 0 433 86 8 0 0 0 2.6678E-09 2 58867 99.927 90.877 1 0.99578 1.2587 0 62905000 28647000 34258000 3250 411 1662 1845 5294;5295 5295 KVEEAEPEEFVVEK 14 2 0 Unmodified _KVEEAEPEEFVVEK_ 0 0 0 1 A4D177;Q13185;C9JMM0;B8ZZ43;S4R2Y4 A4D177 A4D177 CBX3 Chromobox protein homolog 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 831.4187 2 831.417068 1660.81958 66797.59 1.478 0.0012289 -0.45487 -0.00037819 1.0232 0.00085069 831.416693507595 839.430891031854 101.54 1.1991 101.54 101.29 102.48 0 546 99 8 0 0 0 2.1884E-50 3 58338 185.87 146.25 1 1.0751 1.3707 0 85380000 41479000 43901000 3251 411 1662 1845 5296;5297;5298 5297 KVEEEGSPGDPDHEASTQGR 20 1 1 Unmodified _KVEEEGSPGDPDHEASTQGR_ 0 0 0 1 V9H0E3;Q6PK21;A0A0A0MRN5;Q05BV5;B3KMQ6;Q9NZT2 V9H0E3 V9H0E3 OGFR Opioid growth factor receptor MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 715.328 3 708.985799 2123.93557 72428.66 0.72775 0.00051597 0.18673 0.00013239 0.91448 0.00064835 709.319897978862 714.993353474199 65.493 0.28836 65.493 65.351 65.64 0 93 21 7 0 0 0 5.1645E-18 2 31564 93.583 84.213 1 1.4124 1.6644 0 43558000 19419000 24139000 3252 288 1663 1846 5299;5300 5300 KVEEEGSPGDPDHEASTQGR 20 1 1 Unmodified _KVEEEGSPGDPDHEASTQGR_ 0 0 0 1 V9H0E3;Q6PK21;A0A0A0MRN5;Q05BV5;B3KMQ6;Q9NZT2 V9H0E3 V9H0E3 OGFR Opioid growth factor receptor MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 536.912 4 531.991169 2123.93557 85145.11 0.45363 0.00024133 0.26562 0.00014131 0.71925 0.00038263 531.991292787508 536.496917301787 65.495 0.26335 65.495 65.339 65.602 0 75 19 7 0 0 0 0.026463 1 31493 19.322 16.399 1 1.5506 1.767 0 22577000 12838000 9739900 3253 288 1663 1846 5301 5301 KVEEEGSPGDPDHEASTQGR 20 1 1 Phospho (STY) _KVEEEGS(ph)PGDPDHEASTQGR_ KVEEEGS(1)PGDPDHEASTQGR KVEEEGS(71.32)PGDPDHEAS(-71.32)T(-73.17)QGR 0 0 1 1 V9H0E3;Q6PK21;A0A0A0MRN5;Q05BV5;B3KMQ6;Q9NZT2 V9H0E3 V9H0E3 OGFR Opioid growth factor receptor MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 735.976 3 735.641243 2203.9019 70771.23 0.96924 0.00071302 0.069478 5.1111E-05 1.0387 0.00076413 735.975585771111 741.648842572039 17.433 0.42473 17.433 17.298 17.723 0 94 16 12 0 0 0 9.7337E-64 1 4621 149.97 138.58 3 0.76171 0.58866 0 191910000 111370000 80545000 3254 288 1663 1847 5302 5302 455 KVEEEGSPGDPDHEASTQGR 20 1 1 Phospho (STY) _KVEEEGS(ph)PGDPDHEASTQGR_ KVEEEGS(0.996)PGDPDHEAS(0.002)T(0.002)QGR KVEEEGS(27.14)PGDPDHEAS(-27.14)T(-27.14)QGR 0 0 1 1 V9H0E3;Q6PK21;A0A0A0MRN5;Q05BV5;B3KMQ6;Q9NZT2 V9H0E3 V9H0E3 OGFR Opioid growth factor receptor MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1111.9705 2 1102.95823 2203.9019 56923.5 0.59004 0.00065079 -0.27159 -0.00029956 0.31845 0.00035124 1103.45927833504 1111.9695026141 17.435 0.23303 17.435 17.298 17.531 0 46 8 9 0 0 0 7.4302E-05 1 4645 41.905 32.247 3 0.71748 0.55103 0 29104000 17629000 11476000 3255 288 1663 1847 5303 5303 455 KVEELEGEITTLNHK 15 2 0 Unmodified _KVEELEGEITTLNHK_ 0 0 0 1 A0A024R7H5;B4E0Z6;Q10589 A0A024R7H5 A0A024R7H5 BST2 Bone marrow stromal antigen 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 580.6445 3 580.643986 1738.91013 81647.75 0.69848 0.00040557 -0.2218 -0.00012879 0.47669 0.00027678 580.643594109639 585.986593647995 122.16 0.42208 122.16 121.95 122.38 7.6294E-06 83 31 4 0 0 0 0.00038303 1 73861 55.186 47.594 1 1.7522 1.8365 0 7307200 3150400 4156800 3256 135 1664 1848 5304 5304 KVEELEGEITTLNHK 15 2 0 Unmodified _KVEELEGEITTLNHK_ 0 0 0 1 A0A024R7H5;B4E0Z6;Q10589 A0A024R7H5 A0A024R7H5 BST2 Bone marrow stromal antigen 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 585.9868 3 580.643986 1738.91013 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.86 1 121.86 121.36 122.36 0 0 0 0 0.00048016 1 73626 52.522 41.049 1 3257 135 1664 1848 5305 5305 KVEELEGEITTLNHK 15 2 0 Unmodified _KVEELEGEITTLNHK_ 0 0 0 1 A0A024R7H5;B4E0Z6;Q10589 A0A024R7H5 A0A024R7H5 BST2 Bone marrow stromal antigen 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 585.9871 3 580.643986 1738.91013 NaN NaN NaN NaN NaN NaN NaN NaN NaN 122.7 1 122.7 122.2 123.2 0 0 0 0 0.0068503 1 74215 41.378 30.59 1 3258 135 1664 1848 5306 5306 KVEETQDEDDDELIFVGEISSSK 23 2 0 Unmodified _KVEETQDEDDDELIFVGEISSSK_ 0 0 0 1 Q8ND82;Q9UJJ2 Q8ND82 Q8ND82 ZNF280C Zinc finger protein 280C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 877.0858 3 871.408099 2611.20247 64494.33 0.59455 0.0005181 -0.27303 -0.00023792 0.32152 0.00028017 871.407957616291 877.084976466667 145.45 0.17368 145.45 145.37 145.54 -1.5259E-05 23 4 7 0 0 0 1.1834E-06 1 83876 44.258 38.639 1 0.9899 1.0343 0 4873300 2194100 2679300 3259 1159 1665 1849 5307 5307 KVEETQDEDDDELIFVGEISSSK 23 2 0 Unmodified _KVEETQDEDDDELIFVGEISSSK_ 0 0 0 1 Q8ND82;Q9UJJ2 Q8ND82 Q8ND82 ZNF280C Zinc finger protein 280C ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 877.4211 3 871.408099 2611.20247 NaN NaN NaN 0.45715 0.00039836 NaN NaN NaN NaN 133.54 0.097778 133.54 133.47 133.57 0 0 0 0 0.0049368 1 81343 29.47 13.164 1 NaN NaN 0 4912200 0 4912200 3260 1159 1665 1849 5308 5308 KVEETQDEDDDELIFVGEISSSK 23 2 0 Unmodified _KVEETQDEDDDELIFVGEISSSK_ 0 0 0 1 Q8ND82;Q9UJJ2 Q8ND82 Q8ND82 ZNF280C Zinc finger protein 280C MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 876.7537 3 871.408099 2611.20247 65781.57 1.1084 0.00096587 0.42964 0.0003744 1.538 0.0013403 871.742997035347 877.085365718632 115.86 0.55232 115.86 115.58 116.13 0 181 46 7 0 0 0 0.0039002 3 74584 23.913 20.385 1 2.1367 1.6945 0 11251000 4609100 6642200 3261 1159 1665 1849 5309;5310;5311 5310 KVEEVLEEEEEEYVVEK 17 2 0 Unmodified _KVEEVLEEEEEEYVVEK_ 0 0 0 1 C9JWS9;K7ELA4;B5MD17;J3KS05;Q6IBN6;P83916 C9JWS9 C9JWS9 CBX1 Chromobox protein homolog 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 709.0201 3 703.675569 2108.00488 73750.16 0.95819 0.00067425 -0.059146 -4.162E-05 0.89904 0.00063263 703.675497525406 709.018584848589 119.34 0.41548 119.34 119.12 119.54 0 98 35 5 0 0 0 7.3306E-06 1 71695 68.82 59.566 1 1.2618 1.4532 0 20155000 6690700 13464000 3262 696 1666 1850 5312 5312 KVEEVLEEEEEEYVVEK 17 2 0 Unmodified _KVEEVLEEEEEEYVVEK_ 0 0 0 1 C9JWS9;K7ELA4;B5MD17;J3KS05;Q6IBN6;P83916 C9JWS9 C9JWS9 CBX1 Chromobox protein homolog 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 709.3533 3 703.675569 2108.00488 73268.76 0.90329 0.00063562 0.26063 0.0001834 1.1639 0.00081902 704.34531082472 709.35285486662 120.53 1.3835 120.53 119.92 121.31 0 261 118 5 0 0 0 2.2303E-08 1 72878 81.723 70.603 1 1.0522 1.1887 0 17538000 5711700 11826000 3263 696 1666 1850 5313 5313 KVEEVLEEEEEEYVVEK 17 2 0 Unmodified _KVEEVLEEEEEEYVVEK_ 0 0 0 1 C9JWS9;K7ELA4;B5MD17;J3KS05;Q6IBN6;P83916 C9JWS9 C9JWS9 CBX1 Chromobox protein homolog 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 709.0187 3 703.675569 2108.00488 73449.5 0.8759 0.00061635 -0.39279 -0.00027639 0.48312 0.00033996 704.009225264408 709.018287587905 122.01 1.0653 122.01 121.64 122.71 7.6294E-06 144 77 4 0 0 0 4.2904E-17 2 73499 107.57 96.451 1 1.0607 1.1516 0 12445000 5406500 7038100 3264 696 1666 1850 5314;5315 5314 KVEEVLEEEEEEYVVEK 17 2 0 Unmodified _KVEEVLEEEEEEYVVEK_ 0 0 0 1 C9JWS9;K7ELA4;B5MD17;J3KS05;Q6IBN6;P83916 C9JWS9 C9JWS9 CBX1 Chromobox protein homolog 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 704.0096 3 703.675569 2108.00488 76354.27 0.96728 0.00068065 -0.019716 -1.3874E-05 0.94757 0.00066678 704.009798878688 709.018327935842 123.49 0.48185 123.49 123.16 123.64 0 80 42 4 0 0 0 0.0080716 1 74781 24.714 17.655 1 0.96375 1.0205 0 8620700 3254100 5366500 3265 696 1666 1850 5316 5316 KVEEVLEEEEEEYVVEK 17 2 0 Unmodified _KVEEVLEEEEEEYVVEK_ 0 0 0 1 C9JWS9;K7ELA4;B5MD17;J3KS05;Q6IBN6;P83916 C9JWS9 C9JWS9 CBX1 Chromobox protein homolog 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 704.0121 3 703.675569 2108.00488 NaN NaN NaN 0.020156 1.4184E-05 NaN NaN NaN NaN 118.53 0.59467 118.53 118.13 118.72 0 0 0 0 3.3477E-08 1 71061 81.723 71.558 1 NaN NaN 0 6507300 6507300 0 3266 696 1666 1850 5317 5317 KVEEVLEEEEEEYVVEK 17 2 0 Unmodified _KVEEVLEEEEEEYVVEK_ 0 0 0 1 C9JWS9;K7ELA4;B5MD17;J3KS05;Q6IBN6;P83916 C9JWS9 C9JWS9 CBX1 Chromobox protein homolog 1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 709.0194 3 703.675569 2108.00488 NaN NaN NaN 0.49131 0.00034572 NaN NaN NaN NaN 118.66 0.26173 118.66 118.49 118.75 7.6294E-06 0 0 0 7.7502E-07 1 71143 68.82 53.898 1 NaN NaN 0 9790800 0 9790800 3267 696 1666 1850 5318 5318 KVEEVLEEEEEEYVVEK 17 2 0 Unmodified _KVEEVLEEEEEEYVVEK_ 0 0 0 1 C9JWS9;K7ELA4;B5MD17;J3KS05;Q6IBN6;P83916 C9JWS9 C9JWS9 CBX1 Chromobox protein homolog 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 703.6756 3 703.675569 2108.00488 NaN NaN NaN -0.29049 -0.00020441 NaN NaN NaN NaN 119.21 0.21434 119.21 119.1 119.31 -7.6294E-06 0 0 0 3.141E-08 2 71622 82.01 65.517 1 NaN NaN 0 4887500 4887500 0 3268 696 1666 1850 5319;5320 5320 KVEEVLEEEEEEYVVEK 17 2 0 Unmodified _KVEEVLEEEEEEYVVEK_ 0 0 0 1 C9JWS9;K7ELA4;B5MD17;J3KS05;Q6IBN6;P83916 C9JWS9 C9JWS9 CBX1 Chromobox protein homolog 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 704.0101 3 703.675569 2108.00488 NaN NaN NaN -0.47246 -0.00033246 NaN NaN NaN NaN 120.42 0.32925 120.42 120.3 120.63 0 0 0 0 8.7704E-07 1 72592 67.645 55.727 1 NaN NaN 0 4877600 4877600 0 3269 696 1666 1850 5321 5321 KVEEVLEEEEEEYVVEK 17 2 0 Unmodified _KVEEVLEEEEEEYVVEK_ 0 0 0 1 C9JWS9;K7ELA4;B5MD17;J3KS05;Q6IBN6;P83916 C9JWS9 C9JWS9 CBX1 Chromobox protein homolog 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 703.6758 3 703.675569 2108.00488 NaN NaN NaN -0.59205 -0.00041661 NaN NaN NaN NaN 120.87 0.87586 120.87 120.51 121.38 0 0 0 0 4.354E-07 2 72728 60.062 49.559 1 NaN NaN 0 6739100 6739100 0 3270 696 1666 1850 5322;5323 5322 KVEEVLEEEEEEYVVEK 17 2 0 Unmodified _KVEEVLEEEEEEYVVEK_ 0 0 0 1 C9JWS9;K7ELA4;B5MD17;J3KS05;Q6IBN6;P83916 C9JWS9 C9JWS9 CBX1 Chromobox protein homolog 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 703.6755 3 703.675569 2108.00488 NaN NaN NaN -1.545 -0.0010872 NaN NaN NaN NaN 121.58 0.39754 121.58 121.38 121.78 0 0 0 0 0.0017899 1 73372 39.863 33.134 1 NaN NaN 0 4520200 4520200 0 3271 696 1666 1850 5324 5324 KVEEVLEEEEEEYVVEK 17 2 0 Unmodified _KVEEVLEEEEEEYVVEK_ 0 0 0 1 C9JWS9;K7ELA4;B5MD17;J3KS05;Q6IBN6;P83916 C9JWS9 C9JWS9 CBX1 Chromobox protein homolog 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 709.0193 3 703.675569 2108.00488 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.77 1 117.77 117.27 118.27 0 0 0 0 1.2665E-06 1 70586 70.942 55.307 1 3272 696 1666 1850 5325 5325 KVEEVLEEEEEEYVVEK 17 2 0 Unmodified _KVEEVLEEEEEEYVVEK_ 0 0 0 1 C9JWS9;K7ELA4;B5MD17;J3KS05;Q6IBN6;P83916 C9JWS9 C9JWS9 CBX1 Chromobox protein homolog 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 703.6761 3 703.675569 2108.00488 NaN NaN NaN NaN NaN NaN NaN NaN NaN 119.95 1 119.95 119.45 120.45 0 0 0 0 0.00023302 1 72181 60.062 48.013 1 3273 696 1666 1850 5326 5326 KVEEVLEEEEEEYVVEK 17 2 0 Unmodified _KVEEVLEEEEEEYVVEK_ 0 0 0 1 C9JWS9;K7ELA4;B5MD17;J3KS05;Q6IBN6;P83916 C9JWS9 C9JWS9 CBX1 Chromobox protein homolog 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 709.0195 3 703.675569 2108.00488 NaN NaN NaN NaN NaN NaN NaN NaN NaN 120.1 1 120.1 119.6 120.6 0 0 0 0 0.00063632 1 72285 54.103 43.729 1 3274 696 1666 1850 5327 5327 KVEEVLEEEEEEYVVEK 17 2 0 Unmodified _KVEEVLEEEEEEYVVEK_ 0 0 0 1 C9JWS9;K7ELA4;B5MD17;J3KS05;Q6IBN6;P83916 C9JWS9 C9JWS9 CBX1 Chromobox protein homolog 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 703.6749 3 703.675569 2108.00488 NaN NaN NaN NaN NaN NaN NaN NaN NaN 122.29 1 122.29 121.79 122.79 0 0 0 0 3.653E-06 1 73925 67.418 56.298 1 3275 696 1666 1850 5328 5328 KVEEVLEEEEEEYVVEK 17 2 0 Unmodified _KVEEVLEEEEEEYVVEK_ 0 0 0 1 C9JWS9;K7ELA4;B5MD17;J3KS05;Q6IBN6;P83916 C9JWS9 C9JWS9 CBX1 Chromobox protein homolog 1 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 704.0098 3 703.675569 2108.00488 73953.47 0.93282 0.0006564 -0.13617 -9.582E-05 0.79665 0.00056058 704.009574950511 709.352756906032 119.68 0.62659 119.68 119.43 120.05 0 115 54 4 0 0 0 0.00054544 1 71942 45.257 28.572 1 1.1329 1.223 0 11436000 5356100 6080200 3276 696 1666 1850 5329 5329 KVEEVLEEEEEEYVVEK 17 2 0 Unmodified _KVEEVLEEEEEEYVVEK_ 0 0 0 1 C9JWS9;K7ELA4;B5MD17;J3KS05;Q6IBN6;P83916 C9JWS9 C9JWS9 CBX1 Chromobox protein homolog 1 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 708.8276 3 703.675569 2108.00488 74136.73 0.98544 0.00069343 0.27991 0.00019696 1.2654 0.0008904 704.009796428333 709.018479064862 118.96 0.36181 118.96 118.83 119.19 0 66 33 4 0 0 0 0.00084589 1 71405 40.432 35.993 1 1.5784 1.8548 0 23475000 8562400 14912000 3277 696 1666 1850 5330 5330 KVEEVLEEEEEEYVVEK 17 2 0 Unmodified _KVEEVLEEEEEEYVVEK_ 0 0 0 1 C9JWS9;K7ELA4;B5MD17;J3KS05;Q6IBN6;P83916 C9JWS9 C9JWS9 CBX1 Chromobox protein homolog 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 704.0106 3 703.675569 2108.00488 72303.52 1.1149 0.00078454 0.16312 0.00011479 1.278 0.00089932 704.009950930382 709.018555721378 101.21 0.93102 101.21 100.83 101.76 -7.6294E-06 561 85 9 0 0 0 1.1777E-07 2 64963 80.238 70.242 1 0.87022 0.69671 0 28980000 14571000 14409000 3278 696 1666 1850 5331;5332 5332 KVEFLK 6 2 0 Unmodified _KVEFLK_ 0 0 0 1 Q9Y5B9;Q0VGA3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 382.2386 2 382.239264 762.463976 96850.63 0.51977 0.00019868 -0.089939 -3.4378E-05 0.42983 0.0001643 382.239144431258 390.253537786302 102.84 2.1128 102.84 101.71 103.82 0 514 160 5 0 0 0 0.025759 1 59103 106.42 19.481 1 0.72288 0.90882 0 51907000 28388000 23518000 3279 1254 1667 1851 5333 5333 KVEVDGSLSDSHVSPPAK 18 2 0 Phospho (STY) _KVEVDGSLSDSHVS(ph)PPAK_ KVEVDGS(0.009)LS(0.007)DS(0.029)HVS(0.955)PPAK KVEVDGS(-20.04)LS(-21.41)DS(-15.24)HVS(15.24)PPAK 0 0 1 1 Q9ULI0;C9JG15 Q9ULI0 Q9ULI0 ATAD2B ATPase family AAA domain-containing protein 2B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 649.985 3 644.641855 1930.90374 74854.24 1.033 0.00066594 -0.12151 -7.8332E-05 0.91153 0.00058761 644.975870305406 649.984640708277 62.751 1.3386 62.751 62.095 63.434 0 678 126 9 0 0 0 0.00014322 1 39174 41.166 36.362 4 2.8453 2.154 0 53278000 13949000 39329000 3280 1237 1668 1852 5334 5334 2534 KVPWFDQQNGR 11 1 1 Unmodified _KVPWFDQQNGR_ 0 0 0 1 Q92522 Q92522 Q92522 H1FX Histone H1x ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 458.9017 3 458.901954 1373.68403 NaN NaN NaN 0.19699 9.04E-05 NaN NaN NaN NaN 107.29 0.43713 107.29 107.15 107.59 -7.6294E-06 0 0 0 0.022173 1 62658 35.496 24.395 1 NaN NaN 0 6346800 6346800 0 3281 1171 1669 1853 5335 5335 KVQTEVLQK 9 2 0 Unmodified _KVQTEVLQK_ 0 0 0 1 Q6IB29;H7C2Q8;Q99848 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 544.8366 2 536.821681 1071.62881 85330.65 0.6249 0.00033546 -0.18307 -9.8277E-05 0.44183 0.00023718 536.821542923892 544.835798797862 75.581 0.4053 75.581 75.313 75.718 -7.6294E-06 78 32 4 0 0 0 0.0001923 2 38930 105.52 52.804 1 1.0458 1.1458 0 14063000 6332700 7729900 3282 883 1670 1854 5336;5337 5337 KVVEAVNSDSDSEFGIPK 18 2 0 2 Phospho (STY) _KVVEAVNS(ph)DS(ph)DSEFGIPK_ KVVEAVNS(1)DS(0.988)DS(0.012)EFGIPK KVVEAVNS(47.55)DS(19.24)DS(-19.24)EFGIPK 0 0 2 1 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1041.45 2 1040.94743 2079.8803 59870.78 1.3366 0.0013913 0.12325 0.0001283 1.4598 0.0015196 1040.94744336908 1048.96165964875 102.04 1.4005 102.04 101.44 102.84 0 741 111 10 0 0 0 1.1462E-24 3 58885 118.52 108.46 3 0.52661 0.679 0 127390000 85964000 41427000 3283 1032 1671 1855 5338;5339;5340 5339 1869;1870;1871 KVVEAVNSDSDSEFGIPK 18 2 0 Phospho (STY) _KVVEAVNS(ph)DSDSEFGIPK_ KVVEAVNS(0.783)DS(0.17)DS(0.048)EFGIPK KVVEAVNS(6.64)DS(-6.64)DS(-12.15)EFGIPK 0 0 1 1 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1001.4651 2 1000.96426 1999.91397 61133.54 0.10676 0.00010686 0.77844 0.00077919 0.8852 0.00088606 1001.46592868004 1008.97954398885 93.629 1.0429 93.629 93.207 94.25 0 507 100 6 0 0 0 1.3774E-06 1 60271 65.924 49.391 3 0.79461 0.62157 0 37152000 19398000 17754000 3284 1032 1671 1856 5341 5341 1869;1870;1871 KWGVPIEK 8 2 0 Unmodified _KWGVPIEK_ 0 0 0 1 B9EG90;P11387;Q9BVT2 B9EG90 B9EG90 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 478.782 2 478.781828 955.549102 88013.29 0.48678 0.00023306 -0.1163 -5.5684E-05 0.37047 0.00017738 478.781610378265 486.79583045347 107.67 0.94217 107.67 107.17 108.12 0 277 70 6 0 0 0 0.019743 1 62838 71.379 33.734 1 0.81839 1.0385 0 72260000 36947000 35314000 3285 729 1672 1857 5342 5342 KYDAFLASESLIK 13 2 0 Unmodified _KYDAFLASESLIK_ 0 0 0 1 P62906;Q1JQ76;A0A024RCW3 P62906 P62906 RPL10A 60S ribosomal protein L10a;Ribosomal protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 742.9043 2 742.903399 1483.79225 70630.3 0.67886 0.00050432 0.12983 9.6455E-05 0.80869 0.00060078 742.903492660179 750.917609614139 146.82 0.21329 146.82 146.63 146.84 0 78 21 4 0 0 0 0.00044236 1 84621 84.169 59.825 1 0.89147 0.96706 0 12278000 6103700 6174500 3286 1020 1673 1858 5343 5343 KYEDICPSTHNMDVPNIK 18 2 0 Oxidation (M) _KYEDICPSTHNM(ox)DVPNIK_ KYEDICPSTHNM(1)DVPNIK KYEDICPSTHNM(92.44)DVPNIK 0 1 0 1 I3L397;I3L504;P63241;F8WCJ1;C9J7B5;C9J4W5;Q9GZV4;Q6IS14 I3L397 I3L397 EIF5A;EIF5A2;EIF5AL1 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-2;Eukaryotic translation initiation factor 5A-1-like MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 732.0157 3 726.338239 2175.99289 70886.93 1.0651 0.00077361 -0.3091 -0.00022451 0.75599 0.0005491 726.339538959111 732.015170002116 106.24 1.1151 106.24 105.49 106.6 0 242 73 6 0 0 0 1.4103E-13 2 61905 92.439 82.878 1 5.5421 6.6922 0 29377000 6196700 23180000 3287 886 1674 1859 5344;5345 5344 243 KYELGRPAANTK 12 2 1 Unmodified _KYELGRPAANTK_ 0 0 0 2 Q5JR95;Q5JR94;P62241 Q5JR95 Q5JR95 RPS8 40S ribosomal protein S8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 458.5967 3 449.917493 1346.73065 90621.51 0.041194 1.8534E-05 -0.27783 -0.000125 -0.23664 -0.00010647 449.917260285015 458.596253139363 91.746 1.0481 91.746 91.241 92.289 0 224 89 6 0 0 0 0.0016572 1 50673 66.538 58.128 1 0.68001 0.79901 0 61425000 30392000 31033000 3288 1016 1675 1860 5346 5346 KYELGRPAANTK 12 2 1 Unmodified _KYELGRPAANTK_ 0 0 0 2 Q5JR95;Q5JR94;P62241 Q5JR95 Q5JR95 RPS8 40S ribosomal protein S8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 458.5965 3 449.917493 1346.73065 90224.68 0.59255 0.0002666 -0.19311 -8.6884E-05 0.39944 0.00017972 449.917420345961 458.596230385609 93.04 1.3769 93.04 92.181 93.558 0 366 117 5 0 0 0 0.00029609 2 51630 79.705 64.756 1 0.67695 0.79669 0 83207000 49101000 34107000 3289 1016 1675 1860 5347;5348 5348 KYELGRPAANTK 12 2 1 Unmodified _KYELGRPAANTK_ 0 0 0 2 Q5JR95;Q5JR94;P62241 Q5JR95 Q5JR95 RPS8 40S ribosomal protein S8 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 458.5964 3 449.917493 1346.73065 NaN NaN NaN 0.17747 7.9846E-05 NaN NaN NaN NaN 91.145 0.55885 91.145 90.682 91.241 0 0 0 0 0.0097741 1 50064 43.991 27.738 1 NaN NaN 0 18232000 0 18232000 3290 1016 1675 1860 5349 5349 KYEPPVPTR 9 1 1 Unmodified _KYEPPVPTR_ 0 0 0 1 Q53XL8;Q53HB3;P62191 Q53XL8 Q53XL8 PSMC1 26S protease regulatory subunit 4 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 552.8124 2 543.800749 1085.58694 NaN NaN NaN 0.13458 7.3185E-05 NaN NaN NaN NaN 80.334 0.47267 80.334 80.061 80.534 0 0 0 0 0.0095809 2 42513 56.729 36.209 1 NaN NaN 0 7566300 0 7566300 3291 1015 1676 1861 5350;5351 5351 KYEQGFITDPVVLSPK 16 2 0 Phospho (STY) _KYEQGFITDPVVLS(ph)PK_ KYEQGFITDPVVLS(1)PK KY(-52.06)EQGFIT(-38.1)DPVVLS(38.1)PK 0 0 1 1 H0Y4R1;P12268;Q6QE17;B7Z1G4 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 634.3206 3 634.320054 1899.93833 NaN NaN NaN NaN NaN NaN NaN NaN NaN 120.78 1 120.78 120.28 121.28 0 0 0 0 0.00051163 1 72790 53.059 31.072 3 3292 850 1677 1862 5352 5352 1461 KYEQGFITDPVVLSPK 16 2 0 Phospho (STY) _KYEQGFITDPVVLS(ph)PK_ KYEQGFIT(0.001)DPVVLS(0.999)PK KY(-53.77)EQGFIT(-28.4)DPVVLS(28.4)PK 0 0 1 1 H0Y4R1;P12268;Q6QE17;B7Z1G4 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 958.9909 2 950.976442 1899.93833 NaN NaN NaN 0.91412 0.00086931 NaN NaN NaN NaN 116.6 0.7724 116.6 116.05 116.83 0 0 0 0 2.4189E-06 1 75133 59.372 45.408 3 NaN NaN 0 9178400 0 9178400 3293 850 1677 1862 5353 5353 1461 KYETVQDILK 10 2 0 Unmodified _KYETVQDILK_ 0 0 0 1 Q71UH4;Q02880;Q59H80;B4DKD0;E9PCY5;Q6W6M6;H7BZ82 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 618.8453 2 618.845353 1235.67615 NaN NaN NaN -0.12926 -7.9992E-05 NaN NaN NaN NaN 118.85 0.63041 118.85 118.56 119.19 0 0 0 0 0.00067075 1 71185 74.162 34.858 1 NaN NaN 0 5620300 5620300 0 3294 1032 1678 1863 5354 5354 KYETVQDILK 10 2 0 Unmodified _KYETVQDILK_ 0 0 0 1 Q71UH4;Q02880;Q59H80;B4DKD0;E9PCY5;Q6W6M6;H7BZ82 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 618.8458 2 618.845353 1235.67615 NaN NaN NaN -0.43496 -0.00026918 NaN NaN NaN NaN 119.34 0.090958 119.34 119.3 119.39 7.6294E-06 0 0 0 0.034208 1 71758 39.305 16.564 1 NaN NaN 0 3513300 3513300 0 3295 1032 1678 1863 5355 5355 KYETVQDILK 10 2 0 Unmodified _KYETVQDILK_ 0 0 0 1 Q71UH4;Q02880;Q59H80;B4DKD0;E9PCY5;Q6W6M6;H7BZ82 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 627.3109 2 618.845353 1235.67615 81392.95 0.83753 0.0005183 -0.039646 -2.4535E-05 0.79789 0.00049377 618.845423971396 626.859440120876 118.03 0.42328 118.03 117.85 118.28 0 102 37 4 0 0 0 0.019178 1 70896 31.494 12.516 1 0.51229 0.5361 0 5981400 3151300 2830100 3296 1032 1678 1863 5356 5356 KYPLTVFESR 10 1 1 Phospho (STY) _KYPLTVFES(ph)R_ KYPLT(0.003)VFES(0.997)R KY(-66.82)PLT(-25.35)VFES(25.35)R 0 0 1 1 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 660.3211 2 660.323403 1318.63225 75669.17 1.038 0.00068542 -0.48979 -0.00032342 0.54822 0.000362 660.322627158501 669.334462348483 108.09 0.92068 108.09 107.71 108.63 0 279 70 6 0 0 0 0.0017032 2 63162 69.03 60.498 3 1.1323 1.3298 0 39741000 18422000 21319000 3297 953 1679 1864 5357;5358 5357 1655 KYPLTVFESR 10 1 1 Phospho (STY) _KYPLTVFES(ph)R_ KYPLT(0.022)VFES(0.978)R KY(-64.55)PLT(-16.55)VFES(16.55)R 0 0 1 1 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 660.325 2 660.323403 1318.63225 74921.72 1.1322 0.00074763 0.032541 2.1487E-05 1.1648 0.00076912 660.323325486515 669.334616169437 98.293 1.6511 98.293 97.823 99.474 0 646 153 6 0 0 0 0.0027049 3 63537 64.55 52.703 3 1.8075 1.3797 0 20914000 7041200 13873000 3298 953 1679 1864 5359;5360;5361 5361 1655 KYSDSSLPPSNSGK 14 2 0 Phospho (STY) _KYS(ph)DSSLPPSNSGK_ KY(0.002)S(0.989)DS(0.006)S(0.002)LPPSNSGK KY(-26.3)S(22.39)DS(-22.39)S(-26.03)LPPS(-50.76)NS(-50.36)GK 0 0 1 1 Q8NBP1;F8W108;F8WCU9;Q68CP9 Q8NBP1 Q8NBP1 ARID2 AT-rich interactive domain-containing protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 781.8582 2 773.842885 1545.67122 69527.74 1.0237 0.00079219 -0.45652 -0.00035328 0.56719 0.00043892 773.841909853915 781.85704377555 26.804 1.4829 26.804 25.865 27.348 1.9073E-06 284 83 6 0 0 0 0.0011565 1 13015 56.768 47.41 6 1.8234 1.5142 0 15708000 6366700 9341400 3299 831 1680 1865 5362 5362 1435 KYSEVDDSLPSGGEK 15 2 0 Phospho (STY) _KYS(ph)EVDDSLPSGGEK_ KY(0.001)S(0.999)EVDDSLPSGGEK KY(-31.13)S(31.13)EVDDS(-37.7)LPS(-62.01)GGEK 0 0 1 1 A0A024R5Q8;Q05D32;H0YMH7;H0YNU2;H0YNW9 A0A024R5Q8 A0A024R5Q8 CTDSPL2 CTD small phosphatase-like protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 846.3667 2 845.864015 1689.71348 67101.93 0.57327 0.00048491 -0.067276 -5.6906E-05 0.50599 0.000428 846.365551937413 853.87822560971 71.072 0.88695 71.072 70.562 71.449 0 332 87 5 0 0 0 1.0162E-06 3 35434 85.469 70.789 4 1.1642 1.4365 0 35104000 17692000 17411000 3300 111 1681 1866 5363;5364;5365 5364 155 KYVISDEEEEDDD 13 1 0 Phospho (STY) _KYVIS(ph)DEEEEDDD_ KYVIS(1)DEEEEDDD KY(-113.19)VIS(113.19)DEEEEDDD 0 0 1 1 Q8WVC0;B4DNM0 Q8WVC0 Q8WVC0 LEO1 RNA polymerase-associated protein LEO1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 837.3138 2 833.306195 1664.59784 66149.67 0.72489 0.00060405 -0.0039539 -3.2948E-06 0.72093 0.00060076 833.306167145485 837.313200669348 67.228 1.4658 67.228 66.626 68.092 0 684 119 7 0 0 0 5.468E-95 5 33170 199.38 181.49 2 1.659 2.0529 0 240570000 102970000 137600000 3301 1166 1682 1867 5366;5367;5368;5369;5370 5369 2250 KYVISDEEEEDDD 13 1 0 Phospho (STY) _KYVIS(ph)DEEEEDDD_ KYVIS(1)DEEEEDDD KY(-57.41)VIS(57.41)DEEEEDDD 0 0 1 1 Q8WVC0;B4DNM0 Q8WVC0 Q8WVC0 LEO1 RNA polymerase-associated protein LEO1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 837.3147 2 833.306195 1664.59784 66777.01 1.0219 0.00085158 0.099991 8.3323E-05 1.1219 0.0009349 833.306271182044 837.313190430886 64.075 1.9676 64.075 63.121 65.088 0 1159 177 9 0 0 0 9.8871E-07 5 39960 94.09 87.986 2 1.8165 1.214 0 171710000 61359000 110360000 3302 1166 1682 1867 5371;5372;5373;5374;5375 5374 2250 LAAAEETAVSPR 12 0 1 Phospho (STY) _LAAAEETAVS(ph)PR_ LAAAEETAVS(1)PR LAAAEET(-50.96)AVS(50.96)PR 0 0 1 0 Q9BUH6 Q9BUH6 Q9BUH6 C9orf142 Protein PAXX MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 647.8062 2 647.805575 1293.5966 75708.14 0.78249 0.0005069 0.051818 3.3568E-05 0.83431 0.00054047 647.805484409099 652.809563440585 55.206 1.5703 55.206 54.514 56.084 0 449 125 6 0 0 0 7.1354E-66 4 23356 182.02 156.58 2 0.26851 0.33848 0 61387000 45802000 15584000 3303 1198 1683 1868 5376;5377;5378;5379 5376 2378 LAAAEETAVSPR 12 0 1 Phospho (STY) _LAAAEETAVS(ph)PR_ LAAAEET(0.002)AVS(0.998)PR LAAAEET(-27.2)AVS(27.2)PR 0 0 1 0 Q9BUH6 Q9BUH6 Q9BUH6 C9orf142 Protein PAXX MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 647.8062 2 647.805575 1293.5966 75986.45 0.92466 0.000599 0.26444 0.0001713 1.1891 0.0007703 647.805578112888 652.809199065501 47.787 1.3508 47.787 47.24 48.591 0 410 124 5 0 0 0 5.0522E-20 5 28937 135.91 111.57 2 0.19239 0.13403 0 38022000 31013000 7009800 3304 1198 1683 1868 5380;5381;5382;5383;5384 5383 2378 LAAAEETAVSPRK 13 1 1 Phospho (STY) _LAAAEETAVS(ph)PRK_ LAAAEET(0.03)AVS(0.97)PRK LAAAEET(-15.08)AVS(15.08)PRK 0 0 1 1 Q9BUH6 Q9BUH6 Q9BUH6 C9orf142 Protein PAXX ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 711.8537 2 711.853056 1421.69156 NaN NaN NaN 0.65974 0.00046964 NaN NaN NaN NaN 54.945 0.32972 54.945 54.688 55.017 0 0 0 0 0.0053818 1 23335 53.377 38.711 2 NaN NaN 0 3173800 3173800 0 3305 1198 1684 1869 5385 5385 2378 LAAAEETAVSPRK 13 1 1 Phospho (STY) _LAAAEETAVS(ph)PRK_ LAAAEET(0.005)AVS(0.995)PRK LAAAEET(-23.44)AVS(23.44)PRK 0 0 1 1 Q9BUH6 Q9BUH6 Q9BUH6 C9orf142 Protein PAXX MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 711.8538 2 711.853056 1421.69156 71945.62 0.97096 0.00069118 0.24347 0.00017331 1.2144 0.0008645 711.853118366254 720.864679415136 30.927 0.66098 30.927 30.618 31.279 -1.9073E-06 223 47 7 0 0 0 6.5384E-05 1 16220 83.633 66.422 2 0.18236 0.14041 0 33271000 27201000 6069900 3306 1198 1684 1869 5386 5386 2378 LAAQSLDTSGLR 12 0 1 Phospho (STY) _LAAQSLDT(ph)SGLR_ LAAQSLDT(0.638)S(0.362)GLR LAAQS(-35.88)LDT(2.45)S(-2.45)GLR 0 0 1 0 P07199 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 661.3232 2 656.318849 1310.62315 75006.59 0.92889 0.00060965 -0.25356 -0.00016642 0.67533 0.00044323 656.318689017535 661.322743642657 81.378 0.8215 81.378 80.905 81.726 0 249 75 4 0 0 0 7.1169E-13 1 43383 113.53 39.576 3 1.1127 1.3679 0 31006000 13508000 17498000 3307 958 1685 1870 5387 5387 1676;2872 LAAQSLDTSGLR 12 0 1 Phospho (STY) _LAAQSLDTS(ph)GLR_ LAAQSLDT(0.088)S(0.912)GLR LAAQS(-60.5)LDT(-10.15)S(10.15)GLR 0 0 1 0 P07199 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 661.3231 2 656.318849 1310.62315 74940.13 1.0983 0.00072083 -0.068221 -4.4775E-05 1.0301 0.00067605 656.318618378747 661.322995253496 83.307 0.79253 83.307 82.914 83.707 0 360 74 6 0 0 0 6.4158E-16 1 53275 123.68 66.512 3 2.0372 1.3911 0 51067000 15895000 35172000 3308 958 1685 1870 5388 5388 1676;2872 LAASASTQQLQEVK 14 1 0 Phospho (STY) _LAASAST(ph)QQLQEVK_ LAAS(0.034)AS(0.385)T(0.58)QQLQEVK LAAS(-12.28)AS(-1.78)T(1.78)QQLQEVK 0 0 1 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 777.3813 2 777.382178 1552.7498 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.764 1 66.764 66.264 67.264 0 0 0 0 0.00038603 1 32632 54.276 34.881 3 3309 943 1686 1871 5389 5389 1619;1620;2857 LAASASTQQLQEVK 14 1 0 Phospho (STY) _LAASAS(ph)TQQLQEVK_ LAAS(0.008)AS(0.775)T(0.217)QQLQEVK LAAS(-19.87)AS(5.54)T(-5.54)QQLQEVK 0 0 1 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 781.8911 2 777.382178 1552.7498 70076.97 1.1884 0.0009238 -0.31251 -0.00024294 0.87584 0.00068087 777.883608323799 781.389027841378 65.95 0.60521 65.95 65.709 66.314 0 188 54 5 0 0 0 0.00011929 1 41149 77.068 77.068 3 0.93953 0.71468 0 11322000 5040100 6281800 3310 943 1686 1871 5390 5390 1619;1620;2857 LAASASTQQLQEVK 14 1 0 Phospho (STY) _LAAS(ph)ASTQQLQEVK_ LAAS(0.954)AS(0.034)T(0.011)QQLQEVK LAAS(14.45)AS(-14.45)T(-19.22)QQLQEVK 0 0 1 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-SECPEP 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 781.9182 2 777.382178 1552.7498 71798.24 1.0672 0.00082959 0.07268 5.65E-05 1.1398 0.00088609 777.382268566535 781.389310508185 73.277 0.65754 73.277 72.91 73.568 0 149 59 4 0 0 0 0.026442 1 46422 49.149 49.149 3 1.0969 0.87841 0 6505400 2897400 3608000 3311 943 1686 1871 5391 5391 1619;1620;2857 LAEDEGDSEPEAVGQSR 17 0 1 Phospho (STY) _LAEDEGDS(ph)EPEAVGQSR_ LAEDEGDS(1)EPEAVGQSR LAEDEGDS(92.01)EPEAVGQS(-92.01)R 0 0 1 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 939.886 2 934.880924 1867.7473 63143.27 0.61772 0.0005775 0.097158 9.0832E-05 0.71488 0.00066833 934.881604221268 939.885460072969 50.108 3.4177 50.108 48.544 51.962 0 1511 279 12 0 0 0 4.8307E-53 5 20351 157.11 142.96 2 23.364 29.629 0 1159600000 43669000 1116000000 3312 1232 1687 1872 5392;5393;5394;5395;5396 5394 2512 LAEDEGDSEPEAVGQSR 17 0 1 Phospho (STY) _LAEDEGDS(ph)EPEAVGQSR_ LAEDEGDS(1)EPEAVGQSR LAEDEGDS(74.67)EPEAVGQS(-74.67)R 0 0 1 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 626.9269 3 623.589708 1867.7473 NaN NaN NaN 0.24977 0.00015576 NaN NaN NaN NaN 50.079 0.79879 50.079 49.745 50.543 0 0 0 0 6.7865E-11 1 19940 89.859 73.365 2 NaN NaN 0 37972000 0 37972000 3313 1232 1687 1872 5397 5397 2512 LAEDEGDSEPEAVGQSR 17 0 1 Phospho (STY) _LAEDEGDS(ph)EPEAVGQSR_ LAEDEGDS(1)EPEAVGQSR LAEDEGDS(50.09)EPEAVGQS(-50.09)R 0 0 1 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 939.8868 2 934.880924 1867.7473 61872.48 0.78447 0.00073338 -0.17755 -0.00016599 0.60691 0.00056739 934.882004786965 939.885772298863 45.375 3.7724 45.375 44.487 48.26 0 1798 349 12 0 0 0 2.541E-09 2 27425 83.404 73.483 2 25.445 16.012 0 2656500000 104630000 2551800000 3314 1232 1687 1872 5398;5399 5399 2512 LAEDEGDSEPEAVGQSR 17 0 1 Phospho (STY) _LAEDEGDS(ph)EPEAVGQSR_ LAEDEGDS(1)EPEAVGQSR LAEDEGDS(59.31)EPEAVGQS(-59.31)R 0 0 1 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 627.2606 3 623.589708 1867.7473 NaN NaN NaN 0.09313 5.8075E-05 NaN NaN NaN NaN 31.601 0.69918 31.601 31.294 31.993 0 0 0 0 1.0565E-06 1 16783 69.122 53.53 2 NaN NaN 0 18337000 0 18337000 3315 1232 1687 1872 5400 5400 2512 LAGLTVSSPLK 11 1 0 Phospho (STY) _LAGLTVS(ph)SPLK_ LAGLT(0.011)VS(0.494)S(0.494)PLK LAGLT(-16.53)VS(0)S(0)PLK 0 0 1 0 Q8WYL5 Q8WYL5 Q8WYL5 SSH1 Protein phosphatase Slingshot homolog 1 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 587.3223 2 583.315047 1164.61554 NaN NaN NaN -0.10995 -6.4138E-05 NaN NaN NaN NaN 107.34 0.73877 107.34 107.1 107.84 0 0 0 0 0.0091267 1 69014 55.549 28.947 3 NaN NaN 0 2406500 0 2406500 3316 1169 1688 1873 5401 5401 2280;2281 LAHCSVCSHPGSPK 14 1 0 Phospho (STY) _LAHCSVCSHPGS(ph)PK_ LAHCS(0.016)VCS(0.036)HPGS(0.947)PK LAHCS(-17.69)VCS(-14.15)HPGS(14.15)PK 0 0 1 0 Q17RS7 Q17RS7 Q17RS7 GEN1 Flap endonuclease GEN homolog 1 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 812.8474 2 808.8391 1615.66365 NaN NaN NaN -2.2654 -0.0018324 NaN NaN NaN NaN 16.902 0.24338 16.902 16.81 17.053 0 0 0 0 0.0035038 1 4205 46.68 29.907 3 NaN NaN 0 2023700 0 2023700 3317 1081 1689 1874 5402 5402 2036 LAHEVGWK 8 1 0 Unmodified _LAHEVGWK_ 0 0 0 0 Q9BSQ6;Q5QTS3;Q53H34;M0QYS1;P40429;Q8J015;Q0VGL3 Q9BSQ6 Q9BSQ6 RPL13A;RPL13a 60S ribosomal protein L13a MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 316.511 3 313.839743 938.497401 111661.8 -0.57228 -0.0001796 0.21936 6.8845E-05 -0.35292 -0.00011076 313.839793206241 316.51110575036 84.694 0.63901 84.694 84.218 84.857 0 133 55 4 0 0 0 0.02684 1 45479 34.173 34.173 1 0.75362 0.92219 0 19874000 11627000 8246600 3318 910 1690 1875 5403 5403 LAHYNK 6 1 0 Unmodified _LAHYNK_ 0 0 0 0 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257;Q6DRA6;Q6DN03 B2R4S9;A0A024RCJ2 B2R4S9 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 377.2101 2 373.203213 744.391873 97358.63 -0.050141 -1.8713E-05 0.17234 6.4317E-05 0.1222 4.5604E-05 373.20318556827 377.210258670148 62.551 1.3365 62.551 62.002 63.338 0 370 107 7 0 0 0 0.025471 1 29166 116.49 116.49 1 0.81589 1.0104 0 170760000 92141000 78622000 3319 21;211 1691 1876 5404 5404 LAIQGPEDSPSR 12 0 1 Phospho (STY) _LAIQGPEDS(ph)PSR_ LAIQGPEDS(0.848)PS(0.152)R LAIQGPEDS(7.47)PS(-7.47)R 0 0 1 0 Q5U0N1;A8K1F4;Q15773 Q5U0N1 Q5U0N1 MLF2 Myeloid leukemia factor 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 675.3088 2 675.308481 1348.60241 74446.09 0.59452 0.00040149 0.15763 0.00010645 0.75216 0.00050794 675.308408164178 680.3128645663 65.277 1.1028 65.277 64.659 65.762 0 291 81 5 0 0 0 0.0092696 1 31703 51.013 38.787 2 0.76955 0.97041 0 64050000 32958000 31092000 3320 444 1692 1877 5405 5405 771;772 LAIQGPEDSPSR 12 0 1 Phospho (STY) _LAIQGPEDS(ph)PSR_ LAIQGPEDS(0.5)PS(0.5)R LAIQGPEDS(0)PS(0)R 0 0 1 0 Q5U0N1;A8K1F4;Q15773 Q5U0N1 Q5U0N1 MLF2 Myeloid leukemia factor 2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 675.309 2 675.308481 1348.60241 NaN NaN NaN 1.883 0.0012716 NaN NaN NaN NaN 64.843 0.361 64.843 64.563 64.924 0 0 0 0 0.0022183 1 30969 61.532 19.29 2 NaN NaN 0 9386200 9386200 0 3321 444 1692 1877 5406 5406 771;772 LAIQGPEDSPSR 12 0 1 Phospho (STY) _LAIQGPEDS(ph)PSR_ LAIQGPEDS(0.87)PS(0.13)R LAIQGPEDS(8.27)PS(-8.27)R 0 0 1 0 Q5U0N1;A8K1F4;Q15773 Q5U0N1 Q5U0N1 MLF2 Myeloid leukemia factor 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 675.3086 2 675.308481 1348.60241 73220.59 0.98946 0.00066819 0.53649 0.0003623 1.5259 0.0010305 675.308454810628 680.313952282923 60.619 1.7567 60.619 59.469 61.226 0 613 166 6 0 0 0 9.1425E-06 2 37458 92.151 81.286 2 0.98985 0.67698 0 49911000 24635000 25276000 3322 444 1692 1877 5407;5408 5407 771;772 LALDLEIATYR 11 0 1 Unmodified _LALDLEIATYR_ 0 0 0 0 H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRG2 H6VRG3;H6VRG2 H6VRG2 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 639.8608 2 639.358628 1276.7027 NaN NaN NaN -0.15761 -0.00010077 NaN NaN NaN NaN 124 0.29255 124 123.8 124.09 0 0 0 0 0.0021912 1 80200 72.006 0 1 NaN NaN 0 1458700 1458700 0 + 3323 876;877 1693 1878 5409 5409 LALSPLSLGK 10 1 0 Phospho (STY) _LALS(ph)PLSLGK_ LALS(0.998)PLS(0.002)LGK LALS(27.99)PLS(-27.99)LGK 0 0 1 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 539.799 2 539.799033 1077.58351 84166.28 0.66171 0.00035719 -0.1592 -8.5934E-05 0.50251 0.00027126 539.798939776493 543.805988992325 116.91 0.74984 116.91 116.47 117.22 0 259 66 6 0 0 0 0.0001789 3 70048 89.805 81.223 2 0.85082 1.0427 0 20674000 10710000 9964300 3324 999 1694 1879 5410;5411;5412 5412 1811 LALSPLSLGK 10 1 0 Phospho (STY) _LALS(ph)PLSLGK_ LALS(1)PLSLGK LALS(33.21)PLS(-33.21)LGK 0 0 1 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 543.8068 2 539.799033 1077.58351 82858.52 0.92925 0.00050161 -0.025987 -1.4028E-05 0.90326 0.00048758 539.798898572717 543.806013965907 123.98 0.90666 123.98 123.59 124.49 0 364 85 6 0 0 0 0.0001252 2 79972 90.434 90.434 2 1.7127 1.3225 0 12484000 4655000 7829500 3325 999 1694 1879 5413;5414 5413 1811 LAPDYDALDVANK 13 1 0 Unmodified _LAPDYDALDVANK_ 0 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7;B9EJE3 H7BY10 H7BY10 RPL23A;RPL23AL 60S ribosomal protein L23a MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 706.8639 2 702.853906 1403.69326 71931.96 1.2321 0.00086599 -0.24585 -0.00017279 0.98626 0.0006932 702.854126900359 706.860978401968 93.747 1.1511 93.747 93.368 94.519 0 348 97 6 0 0 0 0.01422 1 52091 63.408 46.776 1 0.56877 0.70674 0 92829000 57623000 35206000 3326 511 1695 1880 5415 5415 LAPDYDALDVANK 13 1 0 Unmodified _LAPDYDALDVANK_ 0 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7;B9EJE3 H7BY10 H7BY10 RPL23A;RPL23AL 60S ribosomal protein L23a MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 706.8613 2 702.853906 1403.69326 73283.53 1.1073 0.00077825 0.038774 2.7252E-05 1.146 0.0008055 702.853919109067 706.86096740955 91.37 1.3469 91.37 90.695 92.042 0 651 129 7 0 0 0 5.4974E-06 4 59073 96.015 96.015 1 0.81828 0.53269 0 40423000 21533000 18890000 3327 511 1695 1880 5416;5417;5418;5419 5417 LAPVPSPEPQK 11 1 0 Phospho (STY) _LAPVPS(ph)PEPQK_ LAPVPS(1)PEPQK LAPVPS(45.92)PEPQK 0 0 1 0 Q96JM3 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 621.8109 2 621.810129 1241.6057 77450.67 0.53866 0.00033494 -0.24611 -0.00015304 0.29254 0.00018191 621.810232890191 625.816839338937 66.324 0.92631 66.324 65.815 66.741 0 201 68 4 0 0 0 0.013926 1 32013 45.915 33.996 1 0.71859 0.91045 0 32618000 15889000 16729000 3328 1180 1696 1881 5420 5420 2324 LASASLLDTDK 11 1 0 Phospho (STY) _LASASLLDT(ph)DK_ LASAS(0.004)LLDT(0.995)DK LAS(-38.6)AS(-23.55)LLDT(23.55)DK 0 0 1 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 611.2969 2 607.289226 1212.5639 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.607 1 78.607 78.107 79.107 0 0 0 0 0.0036997 1 41244 68.809 27.526 3 3329 1223 1697 1882 5421 5421 2479;2996 LASASLLDTDK 11 1 0 Phospho (STY) _LASAS(ph)LLDTDK_ LAS(0.066)AS(0.932)LLDT(0.003)DK LAS(-11.52)AS(11.52)LLDT(-25.48)DK 0 0 1 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 611.2968 2 607.289226 1212.5639 79475.38 1.0552 0.00064079 -0.13189 -8.0095E-05 0.92327 0.00056069 607.289215555329 611.296185673724 89.074 0.7949 89.074 88.651 89.446 0 260 77 5 0 0 0 0.0081757 1 57385 59.227 59.227 3 0.9719 0.71932 0 8986000 4474400 4511600 3330 1223 1697 1882 5422 5422 2479;2996 LASDDRPSPPR 11 0 2 Phospho (STY) _LASDDRPS(ph)PPR_ LAS(0.002)DDRPS(0.998)PPR LAS(-26.6)DDRPS(26.6)PPR 0 0 1 1 A0A0S2Z4X1;A0A0S2Z4W4;Q7Z3D7;A0A0A0MR66;P98175 A0A0S2Z4X1 A0A0S2Z4X1 DKFZp686E2459;RBM10 RNA-binding protein 10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 437.5383 3 430.86612 1289.57653 90482.81 -0.040102 -1.7279E-05 0.01436 6.1873E-06 -0.025742 -1.1091E-05 430.866059784275 437.538280965276 49.714 1.0046 49.714 49.043 50.048 0 409 85 6 0 0 0 0.0016281 2 19979 68.809 48.685 2 1.472 1.8054 0 24909000 9661700 15247000 3331 284 1698 1883 5423;5424 5423 444 LASLGDTASPLVK 13 1 0 Phospho (STY) _LASLGDTAS(ph)PLVK_ LASLGDT(0.245)AS(0.755)PLVK LAS(-51.16)LGDT(-4.88)AS(4.88)PLVK 0 0 1 0 Q6P4F7 Q6P4F7 Q6P4F7 ARHGAP11A Rho GTPase-activating protein 11A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 680.3548 2 676.347075 1350.6796 75448.91 1.7794 0.0012035 0.22527 0.00015236 2.0047 0.0013559 676.347262043737 680.354453266887 100.19 0.61414 100.19 99.921 100.53 7.6294E-06 104 47 4 0 0 0 0.00013187 1 57486 84.753 84.753 3 2.6295 3.1731 0 16706000 5855800 10850000 3332 1122 1699 1884 5425 5425 2137 LASLGDTASPLVK 13 1 0 Phospho (STY) _LASLGDTAS(ph)PLVK_ LASLGDT(0.008)AS(0.992)PLVK LAS(-61.72)LGDT(-21.04)AS(21.04)PLVK 0 0 1 0 Q6P4F7 Q6P4F7 Q6P4F7 ARHGAP11A Rho GTPase-activating protein 11A ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 680.3547 2 676.347075 1350.6796 NaN NaN NaN -0.013267 -8.9733E-06 NaN NaN NaN NaN 105.24 1.1395 105.24 104.73 105.87 7.6294E-06 0 0 0 5.7034E-07 1 67625 94.45 51.641 3 NaN NaN 0 13412000 0 13412000 3333 1122 1699 1884 5426 5426 2137 LASPELER 8 0 1 Phospho (STY) _LAS(ph)PELER_ LAS(1)PELER LAS(96.34)PELER 0 0 1 0 P05412;Q6FHK0;P17535 P05412;P17535 P05412 JUN;JUND Transcription factor AP-1;Transcription factor jun-D MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 497.7339 2 497.73389 993.453226 84114.3 0.51743 0.00025754 -0.066187 -3.2943E-05 0.45124 0.0002246 497.733868254811 502.737895046289 59.896 1.8533 59.896 58.92 60.773 0 786 138 8 0 0 0 0.0032369 4 26566 112.75 65.145 1 0.71732 0.9081 0 441690000 257680000 184010000 3334 957;970 1700 1885 5427;5428;5429;5430 5428 1672 LASPELER 8 0 1 Phospho (STY) _LAS(ph)PELER_ LAS(1)PELER LAS(91.55)PELER 0 0 1 0 P05412;Q6FHK0;P17535 P05412;P17535 P05412 JUN;JUND Transcription factor AP-1;Transcription factor jun-D MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 502.739 2 497.73389 993.453226 84395.74 0.65965 0.00032833 -0.06181 -3.0765E-05 0.59784 0.00029757 497.733958145453 502.737868732451 52.133 2.713 52.133 51.522 54.235 -3.8147E-06 1200 235 10 0 0 0 0.0051155 7 31800 91.549 38.722 1 0.99412 0.6473 0 486240000 240340000 245900000 3335 957;970 1700 1885 5431;5432;5433;5434;5435;5436;5437 5433 1672 LASPQPSYAADANDSK 16 1 0 Phospho (STY) _LAS(ph)PQPSYAADANDSK_ LAS(1)PQPSYAADANDSK LAS(38.78)PQPS(-38.78)Y(-60.9)AADANDS(-61.76)K 0 0 1 0 Q5TGY3 Q5TGY3 Q5TGY3 AHDC1 AT-hook DNA-binding motif-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 857.8705 2 857.869631 1713.72471 67725.85 0.416 0.00035687 0.34558 0.00029646 0.76157 0.00065333 857.870054102537 861.87663899551 53.648 0.77562 53.648 53.195 53.97 -3.8147E-06 277 65 5 0 0 0 3.2736E-06 1 22321 73.279 61.066 4 0.34578 0.41441 0 14421000 10265000 4156800 3336 1109 1701 1886 5438 5438 2100 LASPQPSYAADANDSK 16 1 0 Phospho (STY) _LAS(ph)PQPSYAADANDSK_ LAS(0.991)PQPS(0.009)YAADANDSK LAS(20.56)PQPS(-20.56)Y(-35.18)AADANDS(-44.02)K 0 0 1 0 Q5TGY3 Q5TGY3 Q5TGY3 AHDC1 AT-hook DNA-binding motif-containing protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 857.8697 2 857.869631 1713.72471 65421.86 0.94039 0.00080673 0.062769 5.3848E-05 1.0032 0.00086058 858.370671004179 861.876672193393 49.367 0.96042 49.367 48.867 49.827 -3.8147E-06 497 93 8 0 0 0 0.00029559 1 29586 48.053 38.731 4 0.9613 0.69178 0 20951000 11307000 9644500 3337 1109 1701 1886 5439 5439 2100 LATQSNEITIPVTFESR 17 0 1 Phospho (STY) _LAT(ph)QSNEITIPVTFESR_ LAT(0.842)QS(0.156)NEIT(0.002)IPVTFESR LAT(7.32)QS(-7.32)NEIT(-26.17)IPVT(-38.61)FES(-40.51)R 0 0 1 0 V9HW43;P04792;B4DL87;C9J3N8 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 993.459 2 993.48262 1984.95069 63094.5 0.53393 0.00053045 0.53008 0.00052662 1.064 0.0010571 993.98554547364 998.486400685145 120.46 0.44418 120.46 120.25 120.69 0 92 39 5 0 0 0 0.0019907 1 72556 40.52 40.52 5 2.2931 2.5961 0 10846000 3617100 7229000 3338 955 1702 1887 5440 5440 2867 LATVVGENGSVLR 13 0 1 Phospho (STY) _LATVVGENGS(ph)VLR_ LATVVGENGS(1)VLR LAT(-137.65)VVGENGS(137.65)VLR 0 0 1 0 Q9NQS7;B3KPD3;E9PM67 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 697.8566 2 697.855599 1393.69664 72545.49 1.3428 0.00093709 -0.11656 -8.1343E-05 1.2262 0.00085574 697.855333908844 702.859444687282 93.026 1.359 93.026 92.246 93.605 0 555 115 8 0 0 0 1.2057E-276 5 51792 270.79 228.6 2 0.67077 0.84846 0 276570000 164910000 111650000 3339 1212 1703 1888 5441;5442;5443;5444;5445 5443 2429 LATVVGENGSVLR 13 0 1 Phospho (STY) _LATVVGENGS(ph)VLR_ LATVVGENGS(1)VLR LAT(-53.34)VVGENGS(53.34)VLR 0 0 1 0 Q9NQS7;B3KPD3;E9PM67 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 702.8604 2 697.855599 1393.69664 73422.96 0.94982 0.00066284 0.10802 7.538E-05 1.0578 0.00073822 697.855684874197 702.859786318219 96.489 1.444 96.489 95.709 97.153 -7.6294E-06 724 141 8 0 0 0 1.0485E-06 3 62213 97.797 69.033 2 1.4734 0.99403 0 83145000 33671000 49474000 3340 1212 1703 1888 5446;5447;5448 5447 2429 LATVVGENGSVLRR 14 0 2 Phospho (STY) _LATVVGENGS(ph)VLRR_ LATVVGENGS(1)VLRR LAT(-38.61)VVGENGS(38.61)VLRR 0 0 1 1 Q9NQS7;B3KPD3;E9PM67 Q9NQS7 Q9NQS7 INCENP Inner centromere protein ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 517.6068 3 517.606528 1549.79776 NaN NaN NaN -0.39047 -0.00020211 NaN NaN NaN NaN 78.155 0.38164 78.155 77.882 78.263 0 0 0 0 7.7867E-05 1 49840 59.261 31.926 2 NaN NaN 0 3930500 3930500 0 3341 1212 1704 1889 5449 5449 2429 LAVISDSGEK 10 1 0 Phospho (STY) _LAVISDS(ph)GEK_ LAVIS(0.029)DS(0.971)GEK LAVIS(-15.22)DS(15.22)GEK 0 0 1 0 Q03164;B4E012 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 553.7648 2 549.757562 1097.50057 83033.69 0.40299 0.00022155 0.047313 2.6011E-05 0.4503 0.00024756 549.757548318517 553.76461121141 66.178 1.1226 66.178 65.602 66.725 0 381 83 6 0 0 0 2.5329E-06 2 31960 102.4 76.927 2 0.67048 0.83245 0 102800000 60063000 42732000 3342 1034 1705 1890 5450;5451 5451 1883 LAVISDSGEK 10 1 0 Phospho (STY) _LAVISDS(ph)GEK_ LAVIS(0.001)DS(0.999)GEK LAVIS(-29.65)DS(29.65)GEK 0 0 1 0 Q03164;B4E012 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 549.7579 2 549.757562 1097.50057 81346.43 0.94231 0.00051804 -0.29241 -0.00016075 0.6499 0.00035729 549.757412139305 553.764449675706 59.844 2.0329 59.844 58.959 60.992 3.8147E-06 1072 192 8 0 0 0 1.7321E-15 5 37025 145.23 103.83 2 1.5983 1.0684 0 158290000 61364000 96924000 3343 1034 1705 1890 5452;5453;5454;5455;5456 5455 1883 LAYIAHPK 8 1 0 Unmodified _LAYIAHPK_ 0 0 0 0 A0A024R326;Q6IPI1;P47914 A0A024R326 A0A024R326 RPL29 60S ribosomal protein L29 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 460.7766 2 456.76872 911.522887 90219.29 0.27721 0.00012662 0.25627 0.00011705 0.53348 0.00024367 456.768628187642 460.775961364166 80.098 1.3594 80.098 79.3 80.66 0 488 126 5 0 0 0 0.032069 2 41921 64.803 37.841 1 0.72729 0.90349 0 95916000 53385000 42531000 3344 72 1706 1891 5457;5458 5457 LAYIAHPK 8 1 0 Unmodified _LAYIAHPK_ 0 0 0 0 A0A024R326;Q6IPI1;P47914 A0A024R326 A0A024R326 RPL29 60S ribosomal protein L29 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 307.5198 3 304.848239 911.522887 111210.5 -0.28028 -8.5442E-05 0.364 0.00011097 0.083726 2.5524E-05 304.848292058489 307.519722340965 80.134 1.1302 80.134 79.381 80.511 0 312 104 4 0 0 0 0.031818 1 42158 27.254 23.844 1 0.73306 0.92924 0 34261000 21909000 12352000 3345 72 1706 1891 5459 5459 LCNLEEGSPGSGTYTR 16 0 1 Phospho (STY) _LCNLEEGS(ph)PGSGTYTR_ LCNLEEGS(0.893)PGS(0.067)GT(0.016)Y(0.001)T(0.022)R LCNLEEGS(11.22)PGS(-11.22)GT(-17.52)Y(-30.44)T(-15.99)R 0 0 1 0 R4GNH9;R4GMQ7;B1AMU7;B1AMU3;B1AMU4;Q9Y3B2 R4GNH9 R4GNH9 EXOSC1 Exosome complex component CSL4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 916.3854 2 910.879673 1819.74479 64176.84 1.063 0.00096825 0.083576 7.6128E-05 1.1466 0.0010444 910.879383083627 915.884317450917 65.004 0.91594 65.004 64.584 65.5 0 493 83 8 0 0 0 3.2736E-06 1 40403 73.279 56.535 5 0.72155 0.4957 0 46719000 26781000 19938000 3346 519 1707 1892 5460 5460 885 LDADLLVPASVK 12 1 0 Phospho (STY) _LDADLLVPAS(ph)VK_ LDADLLVPAS(1)VK LDADLLVPAS(106.42)VK 0 0 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 664.8523 2 660.844168 1319.67378 75751.3 0.95276 0.00062962 -0.014976 -9.8971E-06 0.93778 0.00061973 660.844115233379 664.851153076441 116.12 0.69061 116.12 115.79 116.48 7.6294E-06 214 61 5 0 0 0 1.3353E-09 3 69339 106.42 87.153 1 0.91695 1.0968 0 13716000 7908200 5807500 3347 1167 1708 1893 5461;5462;5463 5463 2268 LDDDSDSPSFFEEKPEEPVVLALDPK 26 2 0 Phospho (STY) _LDDDSDS(ph)PSFFEEKPEEPVVLALDPK_ LDDDS(0.173)DS(0.708)PS(0.119)FFEEKPEEPVVLALDPK LDDDS(-6.12)DS(6.12)PS(-7.73)FFEEKPEEPVVLALDPK 0 0 1 1 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1000.4569 3 1000.12128 2997.34201 60937.27 0.58349 0.00058356 0.53326 0.00053333 1.1167 0.0011169 1000.45770432525 1005.79897445087 129.86 1.715 129.86 129.13 130.84 0 1075 156 10 0 0 0 3.1793E-06 1 78936 41.483 35.322 3 0.54859 0.68981 0 52165000 29793000 22372000 3348 552 1709 1894 5464 5464 911;912 LDDDSDSPSFFEEKPEEPVVLALDPK 26 2 0 2 Phospho (STY) _LDDDS(ph)DS(ph)PSFFEEKPEEPVVLALDPK_ LDDDS(0.981)DS(0.912)PS(0.107)FFEEKPEEPVVLALDPK LDDDS(16.7)DS(10.06)PS(-10.06)FFEEKPEEPVVLALDPK 0 0 2 1 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1027.4453 3 1026.77672 3077.30834 58488.93 0.78356 0.00080454 -0.64722 -0.00066455 0.13634 0.00013999 1027.11078648244 1032.45274310303 133.5 0.13779 133.5 133.43 133.57 0 36 5 9 0 0 0 1.5638E-18 1 81301 72.292 66.132 3 0.54999 0.69088 0 50364000 33217000 17147000 3349 552 1709 1895 5465 5465 911;912 LDDHALTGASDSR 13 0 1 Unmodified _LDDHALTGASDSR_ 0 0 0 0 A0JLS5;J3KNP2;Q12788 A0JLS5 A0JLS5 TBL3 Transducin beta-like protein 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 453.2166 3 453.216267 1356.62697 91357.76 0.26299 0.00011919 0.40946 0.00018558 0.67245 0.00030477 453.21626448338 456.552408013026 29.87 0.52013 29.87 29.599 30.119 0 145 35 6 0 0 0 0.013695 1 15388 30.543 30.543 1 1.2277 1.0088 0 6065500 3332400 2733100 3350 397 1710 1896 5466 5466 LDDQESPVYAAQQR 14 0 1 Phospho (STY) _LDDQES(ph)PVYAAQQR_ LDDQES(1)PVYAAQQR LDDQES(36.79)PVY(-36.79)AAQQR 0 0 1 0 Q96ST3;H3BMA2;H3BT34;H3BQ76;H3BQ88;H3BNA0;H3BNZ3;H3BQL7;H3BP90 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 850.8717 2 850.369799 1698.72504 66882.79 0.77324 0.00065754 0.1948 0.00016566 0.96804 0.00082319 850.370794237044 855.373209596923 56.606 1.0637 56.606 56.084 57.148 3.8147E-06 362 85 6 0 0 0 8.4545E-06 2 24526 83.499 73.448 2 0.47391 0.57286 0 19291000 10898000 8393500 3351 1187 1711 1897 5467;5468 5468 2338 LDGERPGPNR 10 0 2 Unmodified _LDGERPGPNR_ 0 0 0 1 Q59FW1;H0Y4T7;A0A024R6P5;E7ESY4;Q13330 Q59FW1 Q59FW1 MTA1 Metastasis-associated protein MTA1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 370.8598 3 370.859866 1109.55777 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.369 1 57.369 56.869 57.869 3.8147E-06 0 0 0 0.018331 1 25138 36.424 17.694 1 3352 124 1712 1898 5469 5469 LDGLVETPTGYIESLPR 17 0 1 Phospho (STY) _LDGLVET(ph)PTGYIESLPR_ LDGLVET(1)PTGYIESLPR LDGLVET(33.63)PT(-33.63)GY(-58.21)IES(-58.27)LPR 0 0 1 0 F8VRJ2;B7Z5H0;H0YHC3;F8W020;F8W118;F8VXI6;F8VUX1;F8VY35;F8VV59;B7Z9C2;A0A024RBE6;F8W0J6;F5H4R6;B7Z2V4;H0YIV4;A0A024RBB7;P55209 F8VRJ2 F8VRJ2 NAP1L1 Nucleosome assembly protein 1-like 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 970.4744 2 970.474264 1938.93397 62109.52 0.71828 0.00069708 0.22655 0.00021986 0.94483 0.00091694 970.474616922062 975.47852007115 129.82 0.99423 129.82 129.44 130.44 0 677 91 11 0 0 0 3.2704E-42 3 78784 138.91 125.1 4 1.208 1.5266 0 162230000 70208000 92025000 3353 194 1713 1899 5470;5471;5472 5471 305;2656 LDGLVETPTGYIESLPR 17 0 1 Phospho (STY) _LDGLVET(ph)PTGYIESLPR_ LDGLVET(0.993)PT(0.007)GYIESLPR LDGLVET(21.61)PT(-21.61)GY(-49.85)IES(-53.89)LPR 0 0 1 0 F8VRJ2;B7Z5H0;H0YHC3;F8W020;F8W118;F8VXI6;F8VUX1;F8VY35;F8VV59;B7Z9C2;A0A024RBE6;F8W0J6;F5H4R6;B7Z2V4;H0YIV4;A0A024RBB7;P55209 F8VRJ2 F8VRJ2 NAP1L1 Nucleosome assembly protein 1-like 1 MULTI-SECPEP 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 970.4408 2 970.474264 1938.93397 61645.56 0.67292 0.00065305 0.21276 0.00020648 0.88568 0.00085953 970.475460136698 975.478121130567 134.73 0.32956 134.73 134.63 134.96 1.5259E-05 52 9 11 0 0 0 9.7129E-20 1 86983 104.2 93.856 4 2.4456 1.6476 0 89245000 29690000 59555000 3354 194 1713 1899 5473 5473 305;2656 LDGLVETPTGYIESLPR 17 0 1 2 Phospho (STY) _LDGLVET(ph)PTGYIES(ph)LPR_ LDGLVET(0.976)PT(0.024)GY(0.01)IES(0.99)LPR LDGLVET(17.68)PT(-17.68)GY(-20.98)IES(20.94)LPR 0 0 2 0 F8VRJ2;B7Z5H0;H0YHC3;F8W020;F8W118;F8VXI6;F8VUX1;F8VY35;F8VV59;B7Z9C2;A0A024RBE6;F8W0J6;F5H4R6;B7Z2V4;H0YIV4;A0A024RBB7;P55209 F8VRJ2 F8VRJ2 NAP1L1 Nucleosome assembly protein 1-like 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1010.4575 2 1010.45743 2018.9003 61101.75 0.11114 0.0001123 0.6683 0.00067529 0.77944 0.00078759 1010.95945027375 1015.46201100651 131.93 0.6526 131.93 131.67 132.32 0 332 57 8 0 0 0 3.093E-05 2 80230 65.231 54.573 6 1.1329 1.394 0 23807000 10278000 13529000 3355 194 1713 1900 5474;5475 5475 305;2656 LDGSIPPGQR 10 0 1 Phospho (STY) _LDGS(ph)IPPGQR_ LDGS(1)IPPGQR LDGS(49.35)IPPGQR 0 0 1 0 Q8N6J1;Q59HB6;Q2M1V9;A0A0A0MTH9;O14981 Q8N6J1 Q8N6J1 BTAF1 TATA-binding protein-associated factor 172 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 565.2681 2 560.263346 1118.51214 81234.13 0.70761 0.00039645 -0.15012 -8.4106E-05 0.55749 0.00031234 560.263138770112 565.267361631558 44.98 1.7081 44.98 44.523 46.231 0 439 124 6 0 0 0 0.013225 1 17034 49.35 14.63 1 0.7997 0.9225 0 12189000 6874700 5314000 3356 298 1714 1901 5476 5476 475 LDHYAIIK 8 1 0 Unmodified _LDHYAIIK_ 0 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;Q53RC5 H7BY10 H7BY10 RPL23A;DKFZp547I014 60S ribosomal protein L23a MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 490.7855 2 486.779285 971.544017 89233.09 0.66398 0.00032321 -0.19976 -9.7238E-05 0.46422 0.00022597 486.779028778447 490.786177943014 95.81 0.30836 95.81 95.638 95.947 0 54 27 4 0 0 0 0.02128 1 53903 81.119 44.144 1 0.58329 0.70641 0 17335000 12575000 4760600 3357 511 1715 1902 5477 5477 LDHYAIIK 8 1 0 Unmodified _LDHYAIIK_ 0 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;Q53RC5 H7BY10 H7BY10 RPL23A;DKFZp547I014 60S ribosomal protein L23a MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 486.7799 2 486.779285 971.544017 86304.77 0.19699 9.5892E-05 -0.38067 -0.0001853 -0.18368 -8.9411E-05 486.779092422204 490.786205315567 99.002 1.0354 99.002 98.025 99.061 0 378 84 7 0 0 0 0.00058686 2 55870 127.12 45.736 1 0.58622 0.72523 0 272430000 168180000 104250000 3358 511 1715 1902 5478;5479 5478 LDHYAIIK 8 1 0 Unmodified _LDHYAIIK_ 0 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;Q53RC5 H7BY10 H7BY10 RPL23A;DKFZp547I014 60S ribosomal protein L23a MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 486.779 2 486.779285 971.544017 86281.98 0.69115 0.00033644 -0.22013 -0.00010716 0.47101 0.00022928 486.779103509679 490.786214987277 99.4 1.5576 99.4 99.061 100.62 0 554 128 6 0 0 0 0.0095442 4 56475 116.88 38.352 1 0.61436 0.75946 0 385080000 241890000 143190000 3359 511 1715 1902 5480;5481;5482;5483 5480 LDHYAIIK 8 1 0 Unmodified _LDHYAIIK_ 0 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;Q53RC5 H7BY10 H7BY10 RPL23A;DKFZp547I014 60S ribosomal protein L23a MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 490.7867 2 486.779285 971.544017 87668.63 1.1342 0.00055212 0.77957 0.00037948 1.9138 0.0009316 486.779684039314 490.786504479516 100.79 0.45505 100.79 100.55 101 0 82 32 4 0 0 0 0.028952 1 57772 66.682 26.579 1 0.62598 0.76586 0 19780000 11287000 8493700 3360 511 1715 1902 5484 5484 LDHYAIIK 8 1 0 Unmodified _LDHYAIIK_ 0 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;Q53RC5 H7BY10 H7BY10 RPL23A;DKFZp547I014 60S ribosomal protein L23a MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 490.786 2 486.779285 971.544017 87438.54 0.19657 9.5687E-05 0.33446 0.00016281 0.53103 0.00025849 486.779382992529 490.786327307386 145.52 0.29547 145.52 145.31 145.61 0 31 7 6 0 0 0 0.028952 1 83903 66.682 29.661 1 0.52627 0.62393 0 6353600 4185900 2167700 3361 511 1715 1902 5485 5485 LDHYAIIK 8 1 0 Unmodified _LDHYAIIK_ 0 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;Q53RC5 H7BY10 H7BY10 RPL23A;DKFZp547I014 60S ribosomal protein L23a ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 486.7796 2 486.779285 971.544017 NaN NaN NaN 0.0051396 2.5019E-06 NaN NaN NaN NaN 96.922 0.60648 96.922 96.748 97.355 7.6294E-06 0 0 0 0.018174 1 54685 67.981 23.289 1 NaN NaN 0 11356000 11356000 0 3362 511 1715 1902 5486 5486 LDHYAIIK 8 1 0 Unmodified _LDHYAIIK_ 0 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;Q53RC5 H7BY10 H7BY10 RPL23A;DKFZp547I014 60S ribosomal protein L23a MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 486.7799 2 486.779285 971.544017 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.625 1 97.625 97.125 98.125 -7.6294E-06 0 0 0 0.0019228 1 55283 99.375 39.081 1 3363 511 1715 1902 5487 5487 LDIDSPPITAR 11 0 1 Phospho (STY) _LDIDS(ph)PPITAR_ LDIDS(1)PPITAR LDIDS(40.78)PPIT(-40.78)AR 0 0 1 0 H3BN34;H3BQZ3;H3BU13;H3BT25;H3BUW1;H3BTJ2;H3BQ34;A0A024R609;B4DNK4;H3BTN5;B4DRT3;V9HWB8;A0A024R5Z9;P14618 H3BN34 H3BN34 PKM;PKM2;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 644.3151 2 639.310493 1276.60643 NaN NaN NaN -0.044107 -2.8198E-05 NaN NaN NaN NaN 98.115 1.2282 98.115 97.562 98.79 0 0 0 0 2.244E-11 2 55871 105 50.531 2 NaN NaN 0 37450000 0 37450000 3364 115 1716 1903 5488;5489 5489 167 LDIPTGTTPQRK 12 1 1 Phospho (STY) _LDIPTGTT(ph)PQRK_ LDIPT(0.397)GT(0.195)T(0.408)PQRK LDIPT(-0.12)GT(-3.22)T(0.12)PQRK 0 0 1 1 Q59GZ5;B2RAM6;P52732 Q59GZ5 Q59GZ5 KIF11 Kinesin-like protein;Kinesin-like protein KIF11 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 712.8672 2 703.855599 1405.69664 75665.99 0.74496 0.00052435 -0.16529 -0.00011634 0.57967 0.00040801 703.85520217959 712.866820069027 74.235 0.84253 74.235 73.647 74.489 7.6294E-06 162 72 4 0 0 0 0.014627 1 38061 51.135 30.831 3 2.3357 2.6222 0 18575000 5333200 13242000 3365 548 1717 1904 5490 5490 2762 LDLAGR 6 0 1 Unmodified _LDLAGR_ 0 0 0 0 B4E335;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;V9HVZ7;Q562R1;P0CG38;L0R5C4;P0CG39;K4EQ44;K4EP00;K4ENJ5;Q9BYX7;Q562Z7;Q562Z4;Q562X9;Q562V5;Q562U2;Q562S0;Q562R8;Q562P0;Q562N6;Q562N0;Q562L9;Q562L5;A0AUL6;G8FSY7;Q562Z6;Q562Y8;Q562X7;Q562X4;Q562X2;Q562X1;Q562W9;Q562T6;Q562T5;Q562T4;Q562T3;Q562T0;Q562S2;Q562R6;Q562R4;Q562R0;Q562Q9;Q562Q8;Q562Q6;Q562Q5;Q562Q4;Q562Q3;Q562Q1;Q562Q0;Q562N2;Q562M5;Q562M3;Q562L3;B4E3A4;P63261;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;Q6S8J3;A5A3E0;B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;Q13707;B3KW67;A8K3K1;B4DUI8 B4E335;B4E3A4;B7Z6P1 B4E3A4 PS1TP5BP1;ACTB;ACTG1;HEL-176;ACTBL2;POTEI;POTEM;POTEJ;POTEKP;ACT;POTEE;POTEF;ACTA2;ACTG2;ACTA1;ACTC1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Beta-actin-like protein 2;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 327.6939 2 322.689939 643.365324 NaN NaN NaN 0.46106 0.00014878 NaN NaN NaN NaN 62.341 1.1143 62.341 62.062 63.176 0 0 0 0 0.023632 1 28988 61.997 0 1 NaN NaN 0 18645000 0 18645000 3366 683;685;711 1718 1905 5491 5491 LDLAGR 6 0 1 Unmodified _LDLAGR_ 0 0 0 0 B4E335;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;V9HVZ7;Q562R1;P0CG38;L0R5C4;P0CG39;K4EQ44;K4EP00;K4ENJ5;Q9BYX7;Q562Z7;Q562Z4;Q562X9;Q562V5;Q562U2;Q562S0;Q562R8;Q562P0;Q562N6;Q562N0;Q562L9;Q562L5;A0AUL6;G8FSY7;Q562Z6;Q562Y8;Q562X7;Q562X4;Q562X2;Q562X1;Q562W9;Q562T6;Q562T5;Q562T4;Q562T3;Q562T0;Q562S2;Q562R6;Q562R4;Q562R0;Q562Q9;Q562Q8;Q562Q6;Q562Q5;Q562Q4;Q562Q3;Q562Q1;Q562Q0;Q562N2;Q562M5;Q562M3;Q562L3;B4E3A4;P63261;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;Q6S8J3;A5A3E0;B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;Q13707;B3KW67;A8K3K1;B4DUI8 B4E335;B4E3A4;B7Z6P1 B4E3A4 PS1TP5BP1;ACTB;ACTG1;HEL-176;ACTBL2;POTEI;POTEM;POTEJ;POTEKP;ACT;POTEE;POTEF;ACTA2;ACTG2;ACTA1;ACTC1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Beta-actin-like protein 2;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 322.6899 2 322.689939 643.365324 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.833 1 62.833 62.333 63.333 0 0 0 0 0.0020371 1 29450 87.839 0 1 3367 683;685;711 1718 1905 5492 5492 LDLEDSYTLR 10 0 1 Phospho (STY) _LDLEDS(ph)YTLR_ LDLEDS(0.939)YT(0.061)LR LDLEDS(11.89)Y(-33.62)T(-11.89)LR 0 0 1 0 Q5VWN6;Q6IPC8 Q5VWN6 Q5VWN6 FAM208B;C10orf18 Protein FAM208B ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 652.7925 2 652.792133 1303.56971 NaN NaN NaN -0.05323 -3.4748E-05 NaN NaN NaN NaN 99.176 0.99728 99.176 98.778 99.775 0 0 0 0 0.00013854 1 56274 81.709 39.498 3 NaN NaN 0 13492000 13492000 0 3368 1113 1719 1906 5493 5493 2108 LDLEDSYTLR 10 0 1 Phospho (STY) _LDLEDS(ph)YTLR_ LDLEDS(0.973)YT(0.027)LR LDLEDS(15.54)Y(-54.53)T(-15.54)LR 0 0 1 0 Q5VWN6;Q6IPC8 Q5VWN6 Q5VWN6 FAM208B;C10orf18 Protein FAM208B MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 657.7979 2 652.792133 1303.56971 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.281 1 99.281 98.781 99.781 0 0 0 0 1.758E-08 1 56572 127.17 66.655 3 3369 1113 1719 1906 5494 5494 2108 LDLEDSYTLR 10 0 1 Phospho (STY) _LDLEDS(ph)YTLR_ LDLEDS(0.664)Y(0.001)T(0.335)LR LDLEDS(2.97)Y(-26.91)T(-2.97)LR 0 0 1 0 Q5VWN6;Q6IPC8 Q5VWN6 Q5VWN6 FAM208B;C10orf18 Protein FAM208B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 657.7974 2 652.792133 1303.56971 78299.96 1.2258 0.00080018 -0.26374 -0.00017217 0.96204 0.00062801 652.79204566255 657.796047108847 104.43 1.1734 104.43 103.87 105.05 -7.6294E-06 373 114 5 0 0 0 0.0011821 2 66930 79.492 39.575 3 1.169 0.93003 0 12942000 5767900 7174200 3370 1113 1719 1906 5495;5496 5495 2108 LDLLGNLPGSK 11 1 0 Phospho (STY) _LDLLGNLPGS(ph)K_ LDLLGNLPGS(1)K LDLLGNLPGS(60.35)K 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 607.817 2 603.810129 1205.6057 81550.8 0.7686 0.00046409 -0.052893 -3.1937E-05 0.7157 0.00043215 603.809919797698 607.817084721678 115.83 0.62533 115.83 115.55 116.18 0 143 55 4 0 0 0 0.0079176 2 68993 60.345 46.536 1 1.3674 1.6225 0 11026000 5161800 5864200 3371 994 1720 1907 5497;5498 5498 1788 LDLSVVENGGLK 12 1 0 Phospho (STY) _LDLS(ph)VVENGGLK_ LDLS(1)VVENGGLK LDLS(63.76)VVENGGLK 0 0 1 0 A8K245;Q99986;H0YJJ9;H0YJ50 A8K245 A8K245 VRK1 Serine/threonine-protein kinase VRK1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 666.3392 2 662.331425 1322.6483 NaN NaN NaN 0.45242 0.00029965 NaN NaN NaN NaN 113.05 0.26772 113.05 112.87 113.14 0 0 0 0 0.0023811 1 67125 63.76 32.575 1 NaN NaN 0 3839700 0 3839700 3372 448 1721 1908 5499 5499 779 LDLSVVENGGLK 12 1 0 Phospho (STY) _LDLS(ph)VVENGGLK_ LDLS(1)VVENGGLK LDLS(79.47)VVENGGLK 0 0 1 0 A8K245;Q99986;H0YJJ9;H0YJ50 A8K245 A8K245 VRK1 Serine/threonine-protein kinase VRK1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 662.3318 2 662.331425 1322.6483 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.96 1 112.96 112.46 113.46 0 0 0 0 2.5144E-05 1 67073 79.466 60.842 1 3373 448 1721 1908 5500 5500 779 LDLSVVENGGLK 12 1 0 Phospho (STY) _LDLS(ph)VVENGGLK_ LDLS(1)VVENGGLK LDLS(49.93)VVENGGLK 0 0 1 0 A8K245;Q99986;H0YJJ9;H0YJ50 A8K245 A8K245 VRK1 Serine/threonine-protein kinase VRK1 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 666.3398 2 662.331425 1322.6483 NaN NaN NaN NaN NaN NaN NaN NaN NaN 120.3 1 120.3 119.8 120.8 0 0 0 0 0.0030522 1 77675 49.929 30.142 1 3374 448 1721 1908 5501 5501 779 LDLTENLTGSK 11 1 0 Unmodified _LDLTENLTGSK_ 0 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 599.8245 2 595.816793 1189.61903 NaN NaN NaN 0.016253 9.684E-06 NaN NaN NaN NaN 83.921 0.78336 83.921 83.694 84.478 0 0 0 0 0.0056832 1 53801 64.82 23.372 1 NaN NaN 0 6848000 0 6848000 3375 994 1722 1909 5502 5502 LDLTENLTGSK 11 1 0 Unmodified _LDLTENLTGSK_ 0 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 599.825 2 595.816793 1189.61903 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.623 1 84.623 84.123 85.123 0 0 0 0 0.0090737 1 54292 50.353 16.101 1 3376 994 1722 1909 5503 5503 LDPAASVTGSK 11 1 0 Unmodified _LDPAASVTGSK_ 0 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-SECPEP 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 527.2878 2 523.279846 1044.54514 87431.71 0.82626 0.00043236 0.19807 0.00010365 1.0243 0.00053601 523.280075572108 527.286904304466 39.481 0.39767 39.481 39.316 39.714 0 83 32 4 0 0 0 0.030747 1 22809 49.35 16.51 1 4.3121 3.2115 0 8482700 1635600 6847200 3377 994 1723 1910 5504 5504 LDPAASVTGSKR 12 1 1 Unmodified _LDPAASVTGSKR_ 0 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 609.8239 2 601.330402 1200.64625 80298.63 0.74834 0.00045 -0.18778 -0.00011292 0.56056 0.00033708 601.330203034269 610.341543868065 76.567 0.48753 76.567 76.304 76.792 0 140 41 4 0 0 0 0.029664 1 39632 23.354 7.7387 1 0.89995 1.049 0 32431000 14542000 17889000 3378 994 1724 1911 5505 5505 LDQPGNLPGSNRR 13 0 2 Unmodified _LDQPGNLPGSNRR_ 0 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 481.9066 3 475.251534 1422.73277 97705.05 0.28395 0.00013495 -0.20237 -9.6175E-05 0.081586 3.8774E-05 475.58580780656 481.923390122147 70.42 0.63814 70.42 70.03 70.668 0 106 62 4 0 0 0 0.0078563 1 34984 33.192 33.192 1 1.9045 2.3292 0 22797000 9498900 13298000 3379 994 1725 1912 5506 5506 LDSPDPFK 8 1 0 Phospho (STY) _LDS(ph)PDPFK_ LDS(1)PDPFK LDS(66.27)PDPFK 0 0 1 0 B3KR37;B7Z240;Q7Z5V0;B1AUU8;P42566 B3KR37 B3KR37 EPS15 Epidermal growth factor receptor substrate 15 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 499.7144 2 499.715166 997.415778 NaN NaN NaN -1.2994 -0.00064935 NaN NaN NaN NaN 65.998 1.4224 65.998 65.449 66.871 0 0 0 0 0.0095506 2 41457 66.27 9.8387 1 NaN NaN 0 6596500 6596500 0 3380 524 1726 1913 5507;5508 5508 890 LDSSPSVSSTLAAK 14 1 0 Phospho (STY) _LDSS(ph)PSVSSTLAAK_ LDS(0.04)S(0.96)PSVSSTLAAK LDS(-13.77)S(13.77)PS(-46.36)VS(-62.54)S(-69.38)T(-76.11)LAAK 0 0 1 0 J3KQ96;E7ETY2;Q13428;B4DRA2 J3KQ96 J3KQ96 TCOF1 Treacle protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 725.8499 2 721.842354 1441.67015 71463.55 0.6701 0.00048371 -0.40766 -0.00029427 0.26244 0.00018944 721.842423071041 725.849459196343 72.454 2.0645 72.454 71.549 73.613 0 1326 176 11 0 0 0 3.4703E-33 5 36108 139.3 123.54 6 0.8851 1.0921 0 919000000 493720000 425280000 3381 792 1727 1914 5509;5510;5511;5512;5513 5509 1350;1351 LDSSPSVSSTLAAK 14 1 0 Phospho (STY) _LDSS(ph)PSVSSTLAAK_ LDS(0.14)S(0.856)PS(0.003)VSSTLAAK LDS(-7.86)S(7.86)PS(-23.96)VS(-38.42)S(-43.8)T(-43.8)LAAK 0 0 1 0 J3KQ96;E7ETY2;Q13428;B4DRA2 J3KQ96 J3KQ96 TCOF1 Treacle protein MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 721.8423 2 721.842354 1441.67015 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.489 1 73.489 72.989 73.989 0 0 0 0 1.2542E-05 1 37461 78.486 53.631 6 3382 792 1727 1914 5514 5514 1350;1351 LDSSPSVSSTLAAK 14 1 0 Phospho (STY) _LDSS(ph)PSVSSTLAAK_ LDS(0.236)S(0.701)PS(0.044)VS(0.005)S(0.007)T(0.007)LAAK LDS(-4.72)S(4.72)PS(-12)VS(-21.49)S(-20.09)T(-20.09)LAAK 0 0 1 0 J3KQ96;E7ETY2;Q13428;B4DRA2 J3KQ96 J3KQ96 TCOF1 Treacle protein MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 725.8503 2 721.842354 1441.67015 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.555 1 73.555 73.055 74.055 0 0 0 0 0.0015068 1 37511 47.037 17.228 6 3383 792 1727 1914 5515 5515 1350;1351 LDSSPSVSSTLAAK 14 1 0 Phospho (STY) _LDSS(ph)PSVSSTLAAK_ LDS(0.202)S(0.73)PS(0.058)VS(0.005)S(0.002)T(0.002)LAAK LDS(-5.57)S(5.57)PS(-10.99)VS(-21.27)S(-26.06)T(-24.85)LAAK 0 0 1 0 J3KQ96;E7ETY2;Q13428;B4DRA2 J3KQ96 J3KQ96 TCOF1 Treacle protein MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 725.8513 2 721.842354 1441.67015 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.35 1 74.35 73.85 74.85 0 0 0 0 0.0015558 1 38063 46.797 23.421 6 3384 792 1727 1914 5516 5516 1350;1351 LDSSPSVSSTLAAK 14 1 0 Phospho (STY) _LDSS(ph)PSVSSTLAAK_ LDS(0.064)S(0.934)PS(0.002)VSSTLAAK LDS(-11.67)S(11.67)PS(-26.51)VS(-37.44)S(-42.77)T(-48.01)LAAK 0 0 1 0 J3KQ96;E7ETY2;Q13428;B4DRA2 J3KQ96 J3KQ96 TCOF1 Treacle protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 725.8495 2 721.842354 1441.67015 71450.16 0.97842 0.00070626 0.014733 1.0635E-05 0.99315 0.0007169 721.842804805035 725.849516031314 72.552 3.132 72.552 71.935 75.068 0 1715 282 13 0 0 0 2.3451E-07 4 46684 91.307 87.447 6 2.0013 1.3333 0 1166700000 371950000 794770000 3385 792 1727 1914 5517;5518;5519;5520 5520 1350;1351 LDSSPSVSSTLAAK 14 1 0 2 Phospho (STY) _LDS(ph)S(ph)PSVSSTLAAK_ LDS(0.892)S(0.892)PS(0.099)VS(0.093)S(0.02)T(0.004)LAAK LDS(14.32)S(14.32)PS(-14.32)VS(-14.32)S(-21.29)T(-28.08)LAAK 0 0 2 0 J3KQ96;E7ETY2;Q13428;B4DRA2 J3KQ96 J3KQ96 TCOF1 Treacle protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 765.8323 2 761.825519 1521.63649 71230.7 0.86776 0.00066108 -0.29703 -0.00022628 0.57074 0.0004348 761.824990819888 765.83215273704 79.831 0.7695 79.831 79.492 80.261 0 208 70 4 0 0 0 0.0018213 1 41996 63.624 47.4 15 1.0285 1.2905 0 27800000 12479000 15320000 3386 792 1727 1915 5521 5521 1350;1351 LDSSPSVSSTLAAK 14 1 0 2 Phospho (STY) _LDS(ph)S(ph)PSVSSTLAAK_ LDS(0.973)S(0.911)PS(0.094)VS(0.012)S(0.005)T(0.005)LAAK LDS(16.94)S(10.88)PS(-10.88)VS(-21.19)S(-26.05)T(-26.05)LAAK 0 0 2 0 J3KQ96;E7ETY2;Q13428;B4DRA2 J3KQ96 J3KQ96 TCOF1 Treacle protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 762.3284 2 761.825519 1521.63649 70296.96 1.0854 0.00082685 0.81004 0.00061711 1.8954 0.001444 761.825537485875 765.833324344671 87.47 0.83087 87.47 87.063 87.894 7.6294E-06 243 78 5 0 0 0 0.0022841 1 56257 45.653 31.535 15 2.3081 1.7951 0 14784000 5028900 9754600 3387 792 1727 1915 5522 5522 1350;1351 LDVTILSPSR 10 0 1 Phospho (STY) _LDVTILS(ph)PSR_ LDVT(0.001)ILS(0.797)PS(0.202)R LDVT(-28.16)ILS(5.97)PS(-5.97)R 0 0 1 0 Q68CT4;E7EN95;A0A024R321;O75369 Q68CT4 Q68CT4 DKFZp686A1668;FLNB Filamin-B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 591.3041 2 590.802304 1179.59005 80168.09 0.74525 0.00044029 -0.9461 -0.00055896 -0.20086 -0.00011867 590.801999137477 595.806208857453 106.46 0.70512 106.46 106.05 106.75 0 144 48 4 0 0 0 0.013566 2 61757 48.948 31.139 3 0.85736 0.95588 0 9308200 5127000 4181200 3388 71 1728 1916 5523;5524 5523 91 LDVTILSPSR 10 0 1 Phospho (STY) _LDVTILS(ph)PSR_ LDVT(0.002)ILS(0.749)PS(0.25)R LDVT(-26.96)ILS(4.77)PS(-4.77)R 0 0 1 0 Q68CT4;E7EN95;A0A024R321;O75369 Q68CT4 Q68CT4 DKFZp686A1668;FLNB Filamin-B MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 595.8065 2 590.802304 1179.59005 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.44 1 111.44 110.94 111.94 -7.6294E-06 0 0 0 0.003773 1 71697 59.116 27.695 3 3389 71 1728 1916 5525 5525 91 LDVTILSPSR 10 0 1 Phospho (STY) _LDVTILS(ph)PSR_ LDVT(0.006)ILS(0.756)PS(0.238)R LDVT(-21.36)ILS(5.01)PS(-5.01)R 0 0 1 0 Q68CT4;E7EN95;A0A024R321;O75369 Q68CT4 Q68CT4 DKFZp686A1668;FLNB Filamin-B MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 590.8031 2 590.802304 1179.59005 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.76 1 111.76 111.26 112.26 7.6294E-06 0 0 0 0.0088693 1 71904 48.513 28.516 3 3390 71 1728 1916 5526 5526 91 LDVTILSPSRK 11 1 1 Phospho (STY) _LDVTILS(ph)PSRK_ LDVT(0.021)ILS(0.737)PS(0.242)RK LDVT(-15.35)ILS(4.84)PS(-4.84)RK 0 0 1 1 Q68CT4;E7EN95;A0A024R321;O75369 Q68CT4 Q68CT4 DKFZp686A1668;FLNB Filamin-B MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 654.8514 2 654.849785 1307.68502 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.418 1 97.418 96.918 97.918 0 0 0 0 0.00856 1 55123 45.357 29.476 3 3391 71 1729 1917 5527 5527 91 LEAIITPPPAK 11 1 0 Phospho (STY) _LEAIIT(ph)PPPAK_ LEAIIT(1)PPPAK LEAIIT(184.34)PPPAK 0 0 1 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 619.338 2 615.330697 1228.64684 76671 0.79507 0.00048923 0.050049 3.0796E-05 0.84512 0.00052003 615.330958829807 619.337660932079 94.329 2.8729 94.329 93.093 95.966 0 1554 241 10 0 0 0 9.5278E-58 5 53002 184.34 151.29 1 1.0613 1.3065 0 2588900000 1251100000 1337900000 3392 935 1730 1918 5528;5529;5530;5531;5532 5531 2854 LEAIITPPPAK 11 1 0 Phospho (STY) _LEAIIT(ph)PPPAK_ LEAIIT(1)PPPAK LEAIIT(68.68)PPPAK 0 0 1 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 615.3309 2 615.330697 1228.64684 77938.08 0.48357 0.00029755 0.18808 0.00011573 0.67165 0.00041328 615.3302697468 619.338034070261 145.27 0.11497 145.27 145.25 145.37 0 15 3 7 0 0 0 0.033528 1 83666 68.676 48.346 1 0.91106 1.0834 0 11720000 5688400 6031600 3393 935 1730 1918 5533 5533 2854 LEAIITPPPAK 11 1 0 Phospho (STY) _LEAIIT(ph)PPPAK_ LEAIIT(1)PPPAK LEAIIT(52.07)PPPAK 0 0 1 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 619.34 2 615.330697 1228.64684 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.126 1 97.126 96.626 97.626 7.6294E-06 0 0 0 0.019987 1 54910 52.071 26.133 1 3394 935 1730 1918 5534 5534 2854 LEAIITPPPAK 11 1 0 Phospho (STY) _LEAIIT(ph)PPPAK_ LEAIIT(1)PPPAK LEAIIT(65.35)PPPAK 0 0 1 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 615.3317 2 615.330697 1228.64684 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.655 1 97.655 97.155 98.155 0 0 0 0 0.0057241 1 55309 65.347 24.36 1 3395 935 1730 1918 5535 5535 2854 LEAIITPPPAK 11 1 0 Phospho (STY) _LEAIIT(ph)PPPAK_ LEAIIT(1)PPPAK LEAIIT(47.82)PPPAK 0 0 1 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 619.3383 2 615.330697 1228.64684 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.917 1 98.917 98.417 99.417 7.6294E-06 0 0 0 0.031496 1 56310 47.823 21.885 1 3396 935 1730 1918 5536 5536 2854 LEAIITPPPAK 11 1 0 Phospho (STY) _LEAIIT(ph)PPPAK_ LEAIIT(1)PPPAK LEAIIT(59.8)PPPAK 0 0 1 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 615.2936 2 615.330697 1228.64684 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.49 1 99.49 98.99 99.99 0 0 0 0 0.009881 1 56737 59.8 29.99 1 3397 935 1730 1918 5537 5537 2854 LEAIITPPPAK 11 1 0 Phospho (STY) _LEAIIT(ph)PPPAK_ LEAIIT(1)PPPAK LEAIIT(125.82)PPPAK 0 0 1 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 619.3383 2 615.330697 1228.64684 77461.37 0.87501 0.00053842 -0.071779 -4.4168E-05 0.80323 0.00049425 615.330729938054 619.337679124655 97.601 3.7394 97.601 96.041 99.781 0 2135 358 10 0 0 0 6.8129E-10 5 62262 125.82 85.773 1 1.1768 0.78546 0 392210000 188640000 203570000 3398 935 1730 1918 5538;5539;5540;5541;5542 5538 2854 LEAIITPPPAK 11 1 0 Phospho (STY) _LEAIIT(ph)PPPAK_ LEAIIT(1)PPPAK LEAIIT(67.52)PPPAK 0 0 1 0 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 615.3308 2 615.330697 1228.64684 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.09 1 100.09 99.593 100.59 0 0 0 0 0.004454 1 64341 67.519 16.912 1 3399 935 1730 1918 5543 5543 2854 LEAIITPPPAKK 12 2 0 Phospho (STY) _LEAIIT(ph)PPPAKK_ LEAIIT(1)PPPAKK LEAIIT(78.66)PPPAKK 0 0 1 1 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 679.3788 2 679.378178 1356.7418 77771.71 0.63229 0.00042956 -0.021568 -1.4653E-05 0.61072 0.00041491 679.378171213577 687.392437901142 85.611 0.36475 85.611 85.427 85.792 0 59 34 4 0 0 0 0.0016327 1 46274 78.655 58.352 1 1.6069 1.8415 0 19457000 9590300 9866400 3400 935 1731 1919 5544 5544 2854 LEAIITPPPAKK 12 2 0 Phospho (STY) _LEAIIT(ph)PPPAKK_ LEAIIT(1)PPPAKK LEAIIT(69.6)PPPAKK 0 0 1 1 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 687.3934 2 679.378178 1356.7418 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.281 1 85.281 84.781 85.781 0 0 0 0 0.00050543 1 46042 69.602 47.97 1 3401 935 1731 1919 5545 5545 2854 LEAIITPPPAKK 12 2 0 Phospho (STY) _LEAIIT(ph)PPPAKK_ LEAIIT(1)PPPAKK LEAIIT(72.5)PPPAKK 0 0 1 1 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 687.3926 2 679.378178 1356.7418 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.041 1 86.041 85.541 86.541 0 0 0 0 0.00013294 1 46560 72.496 48.242 1 3402 935 1731 1919 5546 5546 2854 LEAIITPPPAKK 12 2 0 Phospho (STY) _LEAIIT(ph)PPPAKK_ LEAIIT(1)PPPAKK LEAIIT(93.35)PPPAKK 0 0 1 1 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 687.3937 2 679.378178 1356.7418 73675.38 1.0736 0.00072937 -0.09192 -6.2449E-05 0.98167 0.00066692 679.377984453441 687.392284571756 76.552 2.2351 76.552 75.493 77.728 0 957 206 7 0 0 0 1.2496E-05 4 48844 93.348 71.884 1 1.2732 0.98531 0 41803000 17776000 24027000 3403 935 1731 1919 5547;5548;5549;5550 5549 2854 LEAIITPPPAKK 12 2 0 Phospho (STY) _LEAIIT(ph)PPPAKK_ LEAIIT(1)PPPAKK LEAIIT(68.17)PPPAKK 0 0 1 1 O75367;D6RCF2 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 458.5977 3 453.254544 1356.7418 89197.1 0.47742 0.00021639 -0.1231 -5.5797E-05 0.35432 0.0001606 453.254425733782 458.597214338223 76.556 2.1941 76.556 75.534 77.728 0 761 203 6 0 0 0 0.00094044 4 48730 68.168 60.257 1 1.2474 0.96003 0 44414000 18418000 25996000 3404 935 1731 1919 5551;5552;5553;5554 5551 2854 LECVEPNCR 9 0 1 Unmodified _LECVEPNCR_ 0 0 0 0 B2R4V2;H0Y5B4;H7BZ11;J3KQN4;Q969Q0;P83881 B2R4V2 B2R4V2 RPL36A;RPL36A-HNRNPH2;RPL36AL 60S ribosomal protein L36a-like;60S ribosomal protein L36a MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 588.7602 2 588.76044 1175.50633 78506.53 0.7944 0.00046771 -0.23737 -0.00013976 0.55703 0.00032796 588.760454027177 593.764636092635 27.612 0.3215 27.612 27.447 27.768 -1.9073E-06 92 18 7 0 0 0 0.00023714 2 13546 107.01 59.159 1 1.0846 0.74216 0 49516000 23887000 25629000 3405 530 1732 1920 5555;5556 5555 LEDAFIVISDSDGEEPK 17 1 0 2 Phospho (STY) _LEDAFIVIS(ph)DS(ph)DGEEPK_ LEDAFIVIS(1)DS(1)DGEEPK LEDAFIVIS(42.91)DS(42.91)DGEEPK 0 0 2 0 D6RC40;D6RCQ3;A0A024R7R0;Q96RL1;D6RDZ5 D6RC40 D6RC40 UIMC1;RAP80 BRCA1-A complex subunit RAP80 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1012.915 2 1012.41288 2022.81121 61012.93 0.34703 0.00035133 0.95638 0.00096825 1.3034 0.0013196 1012.91529541149 1016.42035402695 124.14 0.77544 124.14 123.78 124.56 -7.6294E-06 466 66 10 0 0 0 0.00042359 1 75037 42.913 36.481 1 0.59505 0.74561 0 27198000 16884000 10314000 3406 139 1733 1921 5557 5557 210;211 LEDIFQQEFSTPSR 14 0 1 Phospho (STY) _LEDIFQQEFST(ph)PSR_ LEDIFQQEFS(0.152)T(0.696)PS(0.152)R LEDIFQQEFS(-6.6)T(6.6)PS(-6.6)R 0 0 1 0 J3QL36;A0A087X0R7;Q9H4L4 J3QL36 J3QL36 SENP3;SENP3-EIF4A1 Sentrin-specific protease 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 893.8995 2 888.895649 1775.77675 65956.24 0.78457 0.0006974 0.073821 6.5619E-05 0.85839 0.00076302 889.397157375406 893.899369749973 114.05 0.51475 114.05 113.85 114.36 0 195 44 8 0 0 0 1.716E-16 2 67821 110.44 91.306 3 1.178 1.4144 0 17823000 7959000 9864300 3407 270 1734 1922 5558;5559 5558 429;2669 LEDIFQQEFSTPSRK 15 1 1 Phospho (STY) _LEDIFQQEFS(ph)TPSRK_ LEDIFQQEFS(0.476)T(0.476)PS(0.049)RK LEDIFQQEFS(0)T(0)PS(-9.91)RK 0 0 1 1 J3QL36;A0A087X0R7;Q9H4L4 J3QL36 J3QL36 SENP3;SENP3-EIF4A1 Sentrin-specific protease 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 635.6322 3 635.631179 1903.87171 77955.35 0.95188 0.00060504 0.064328 4.0889E-05 1.0162 0.00064593 635.631081871052 641.638406785247 107.78 0.62328 107.78 107.49 108.12 7.6294E-06 138 45 5 0 0 0 0.00035201 1 62907 46.3 27.468 3 1.0799 1.2088 0 17611000 8964900 8646500 3408 270 1735 1923 5560 5560 429;2669 LEDNPSSGSPPR 12 0 1 Phospho (STY) _LEDNPSSGS(ph)PPR_ LEDNPSS(0.01)GS(0.99)PPR LEDNPS(-35.17)S(-19.94)GS(19.94)PPR 0 0 1 0 A0A024R5Q8;Q05D32;H0YMH7 A0A024R5Q8 A0A024R5Q8 CTDSPL2 CTD small phosphatase-like protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 673.2869 2 668.282464 1334.55037 74263.95 0.82087 0.00054857 0.16422 0.00010975 0.98509 0.00065832 668.282606651692 673.286675197026 38.83 1.5718 38.83 38.194 39.766 0 892 141 10 0 0 0 4.222E-26 3 13567 146.96 106.46 3 0.93401 1.1755 0 48741000 25501000 23240000 3409 111 1736 1924 5561;5562;5563 5563 156 LEDNPSSGSPPR 12 0 1 Phospho (STY) _LEDNPSSGS(ph)PPR_ LEDNPS(0.001)S(0.039)GS(0.96)PPR LEDNPS(-28.77)S(-13.95)GS(13.95)PPR 0 0 1 0 A0A024R5Q8;Q05D32;H0YMH7 A0A024R5Q8 A0A024R5Q8 CTDSPL2 CTD small phosphatase-like protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 673.287 2 668.282464 1334.55037 74862.38 0.87472 0.00058456 0.083053 5.5503E-05 0.95777 0.00064006 668.282666750053 673.286548896662 27.777 1.0963 27.777 27.125 28.221 -1.9073E-06 283 73 7 0 0 0 1.5996E-16 2 13577 127.71 93.837 3 1.4736 0.98506 0 131770000 55577000 76189000 3410 111 1736 1924 5564;5565 5564 156 LEDQLSEGRNSPEK 14 1 1 Phospho (STY) _LEDQLSEGRNS(ph)PEK_ LEDQLS(0.064)EGRNS(0.936)PEK LEDQLS(-11.64)EGRNS(11.64)PEK 0 0 1 1 Q5VUA4 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 850.3864 2 841.375081 1680.73561 66312.94 0.92223 0.00077594 -1.1588 -0.00097499 -0.23658 -0.00019905 841.373174418399 850.386002194563 29.041 0.5047 29.041 28.808 29.312 0 168 34 7 0 0 0 0.0022633 1 14666 50.04 42.761 2 1.1776 0.90235 0 25745000 12258000 13487000 3411 1111 1737 1925 5566 5566 2102 LEDVLPLAFTR 11 0 1 Unmodified _LEDVLPLAFTR_ 0 0 0 0 X6RGJ2;Q5SSJ5;Q5SWC8;B0QZK4 X6RGJ2 X6RGJ2 HP1BP3 Heterochromatin protein 1-binding protein 3 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 637.8638 2 637.36117 1272.70779 NaN NaN NaN -0.15842 -0.00010097 NaN NaN NaN NaN 130.1 0.33284 130.1 129.93 130.27 0 0 0 0 0.017595 1 83964 51.445 36.67 1 NaN NaN 0 931060 931060 0 3412 1099 1738 1926 5567 5567 LEEFSPR 7 0 1 Phospho (STY) _LEEFS(ph)PR_ LEEFS(1)PR LEEFS(87.81)PR 0 0 1 0 W5ZR30;Q9UGU0;I3L1M7 W5ZR30 W5ZR30 TCF20 Transcription factor 20 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 484.2119 2 479.207508 956.400462 87398.36 0.76006 0.00036423 -0.088071 -4.2204E-05 0.67199 0.00032202 479.20738919836 484.211520782474 55.541 1.4673 55.541 54.87 56.338 3.8147E-06 548 125 6 0 0 0 0.016379 3 34202 87.806 12.338 1 2.0365 1.4661 0 27728000 9545400 18182000 3413 1227 1739 1927 5568;5569;5570 5570 2494 LEETKLEAVR 10 1 1 Unmodified _LEETKLEAVR_ 0 0 0 1 E5RFN8;A0A087X0C7;E5RK50;E5RJK0;E5RK44;E5RI32;E5RIU3;A0A087WVY2;E5RI47;B4DS08;B4DZ84;D3DX48;B4DRL7;A0A0A0MRU0;A0A0D9SFF8;D3DX49;A0A0C4DH75;Q14168 E5RFN8 E5RFN8 MPP2 MAGUK p55 subfamily member 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 402.5666 3 396.559194 1186.65575 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.62 1 111.62 111.12 112.12 0 0 0 0 0.0098309 1 66097 42.743 3.8687 1 3414 257 1740 1928 5571 5571 LEETKLEAVR 10 1 1 Unmodified _LEETKLEAVR_ 0 0 0 1 E5RFN8;A0A087X0C7;E5RK50;E5RJK0;E5RK44;E5RI32;E5RIU3;A0A087WVY2;E5RI47;B4DS08;B4DZ84;D3DX48;B4DRL7;A0A0A0MRU0;A0A0D9SFF8;D3DX49;A0A0C4DH75;Q14168 E5RFN8 E5RFN8 MPP2 MAGUK p55 subfamily member 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 402.2348 3 396.559194 1186.65575 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.67 1 111.67 111.17 112.17 0 0 0 0 0.0098309 1 66131 42.743 3.8687 1 3415 257 1740 1928 5572 5572 LEIYVVTAEGLRPVK 15 1 1 Unmodified _LEIYVVTAEGLRPVK_ 0 0 0 1 B4DZP5;B4DSA8;Q16531;F5GY55;B7Z2A1;F5GYG8;F5GZY8;F5H198 B4DZP5 B4DZP5 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 562.9986 3 562.997812 1685.97161 81931.16 1.01 0.00056861 -0.81492 -0.0004588 0.19505 0.00010981 563.331348606923 569.339207550647 133.47 0.1013 133.47 133.41 133.51 0 19 4 5 0 0 0 0.0022641 1 81264 61.641 56.84 1 0.62024 0.68667 0 13808000 8407600 5400900 3416 656 1741 1929 5573 5573 LEKPETQSSPITVQSSK 17 2 0 Phospho (STY) _LEKPETQS(ph)SPITVQSSK_ LEKPET(0.046)QS(0.475)S(0.475)PIT(0.003)VQSSK LEKPET(-10.19)QS(0)S(0)PIT(-22.37)VQS(-31.04)S(-30.59)K 0 0 1 1 E9PGI3;A0A087WXN4;A0A024RDK4;Q96CB8 E9PGI3 E9PGI3 INTS12 Integrator complex subunit 12 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 646.9871 3 646.985511 1937.9347 77001.23 0.80078 0.0005181 0.16726 0.00010822 0.96805 0.00062631 646.986177265933 652.327879866574 62.341 0.5863 62.341 62.048 62.634 0 241 45 7 0 0 0 0.0001017 2 28962 45.363 42.908 6 0.67482 0.83212 0 34909000 23225000 11684000 3417 229 1742 1930 5574;5575 5574 357;358 LELQGPRGSPNAR 13 0 2 Phospho (STY) _LELQGPRGS(ph)PNAR_ LELQGPRGS(1)PNAR LELQGPRGS(131.96)PNAR 0 0 1 1 B3KM80;Q6ZS99;A0A024R4A0;P19338;H7BY16;Q9BQ02 B3KM80 B3KM80 NCL Nucleolin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 492.2435 3 492.24359 1473.70894 85522.45 0.39653 0.00019519 -0.057728 -2.8416E-05 0.33881 0.00016678 492.243530197955 498.915728295364 64.346 0.85007 64.346 63.939 64.789 0 298 60 7 0 0 0 1.5686E-20 2 30526 131.96 101.23 1 1.1877 1.4785 0 99905000 45751000 54154000 3418 87 1743 1931 5576;5577 5577 116 LELQGPRGSPNAR 13 0 2 Phospho (STY) _LELQGPRGS(ph)PNAR_ LELQGPRGS(1)PNAR LELQGPRGS(95.57)PNAR 0 0 1 1 B3KM80;Q6ZS99;A0A024R4A0;P19338;H7BY16;Q9BQ02 B3KM80 B3KM80 NCL Nucleolin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 492.2441 3 492.24359 1473.70894 84882.05 0.59953 0.00029512 -0.14153 -6.9665E-05 0.45801 0.00022545 492.243550171486 498.915726469671 41.165 2.1855 41.165 40.383 42.569 0 1202 190 9 0 0 0 6.8943E-07 5 24020 95.57 66.026 1 0.5672 0.49525 0 202570000 125420000 77146000 3419 87 1743 1931 5578;5579;5580;5581;5582 5580 116 LELQGPRGSPNAR 13 0 2 Phospho (STY) _LELQGPRGS(ph)PNAR_ LELQGPRGS(1)PNAR LELQGPRGS(41.82)PNAR 0 0 1 1 B3KM80;Q6ZS99;A0A024R4A0;P19338;H7BY16;Q9BQ02 B3KM80 B3KM80 NCL Nucleolin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 737.8628 2 737.861747 1473.70894 70999.45 1.087 0.00080206 0.24768 0.00018275 1.3347 0.00098482 737.861853624675 747.87043307076 41.204 1.6132 41.204 40.479 42.092 0 708 140 7 0 0 0 0.007137 1 24195 41.825 25.687 1 0.5755 0.49932 0 55964000 34037000 21927000 3420 87 1743 1931 5583 5583 116 LELSSSASPQEER 13 0 1 Phospho (STY) _LELSSSAS(ph)PQEER_ LELSS(0.014)S(0.054)AS(0.932)PQEER LELS(-34.04)S(-18.33)S(-12.34)AS(12.34)PQEER 0 0 1 0 A0A075B6T1;B4DZ97;Q9C0C7 A0A075B6T1 A0A075B6T1 AMBRA1 Activating molecule in BECN1-regulated autophagy protein 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 756.8322 2 756.832518 1511.65048 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.133 1 59.133 58.633 59.633 -3.8147E-06 0 0 0 0.0034925 1 26452 97.797 53.488 4 3421 238 1744 1932 5584 5584 366 LENSPVENVTAASTLLSQAK 20 1 0 Phospho (STY) _LENS(ph)PVENVTAASTLLSQAK_ LENS(1)PVENVTAASTLLSQAK LENS(43.22)PVENVT(-43.22)AAS(-60)T(-61.03)LLS(-75.33)QAK 0 0 1 0 A0A024RC19;Q5FWF5 A0A024RC19 A0A024RC19 ESCO1 N-acetyltransferase ESCO1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1081.0369 2 1076.5303 2151.04604 60829.21 0.33821 0.00036409 0.59742 0.00064314 0.93563 0.0010072 1077.03247314003 1081.0397570357 119.46 0.55531 119.46 119.21 119.77 0 215 47 7 0 0 0 1.0517E-10 1 71832 80.238 71.187 5 1.0085 1.2472 0 23756000 11269000 12487000 3422 206 1745 1933 5585 5585 318 LEPASPPEDTSAEVSR 16 0 1 Phospho (STY) _LEPAS(ph)PPEDTSAEVSR_ LEPAS(0.999)PPEDT(0.001)SAEVSR LEPAS(30.28)PPEDT(-30.28)S(-34.7)AEVS(-46.69)R 0 0 1 0 Q75MX6;E9PFE2;Q59FS0;Q9UHL9 Q75MX6 Q75MX6 GTF2IRD1 General transcription factor II-I repeat domain-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 882.8881 2 882.888021 1763.76149 65370.56 0.58139 0.00051331 0.24268 0.00021426 0.82407 0.00072756 882.888234377126 887.892510938833 65.905 0.98999 65.905 65.377 66.367 0 360 76 6 0 0 0 9.3155E-05 1 32168 63.827 47.428 4 1.0007 1.2599 0 51211000 25258000 25953000 3423 800 1746 1934 5586 5586 1378 LEPASPPEDTSAEVSR 16 0 1 Phospho (STY) _LEPAS(ph)PPEDTSAEVSR_ LEPAS(0.989)PPEDT(0.003)S(0.004)AEVS(0.004)R LEPAS(24.17)PPEDT(-24.59)S(-24.17)AEVS(-24.17)R 0 0 1 0 Q75MX6;E9PFE2;Q59FS0;Q9UHL9 Q75MX6 Q75MX6 GTF2IRD1 General transcription factor II-I repeat domain-containing protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 887.8933 2 882.888021 1763.76149 65443.7 1.1099 0.00097991 -0.054083 -4.7749E-05 1.0558 0.00093216 882.8879254623 887.891932370913 66.203 1.7033 66.203 65.574 67.278 0 758 156 6 0 0 0 0.0010386 1 41571 41.871 31.017 4 1.8105 1.229 0 61128000 22998000 38131000 3424 800 1746 1934 5587 5587 1378 LEPTNVQTVTCSPR 14 0 1 Phospho (STY) _LEPTNVQTVT(ph)CSPR_ LEPTNVQT(0.017)VT(0.819)CS(0.164)PR LEPT(-92.89)NVQT(-16.91)VT(6.99)CS(-6.99)PR 0 0 1 0 B2R935;A0A024R1S2;Q99741;J3KTI7;J3QR52;J3QLN7 B2R935 B2R935 CDC6 Cell division control protein 6 homolog MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 846.3904 2 841.384394 1680.75424 65471.97 1.1332 0.00095342 0.20872 0.00017562 1.3419 0.001129 841.384716997269 846.388652473502 67.995 1.1195 67.995 67.352 68.472 0 441 96 6 0 0 0 2.6848E-17 2 42504 118.21 98.887 4 1.6413 1.2342 0 20572000 8037800 12535000 3425 52 1747 1935 5588;5589 5588 2620 LEQIDGHIAEHNSK 14 1 0 Unmodified _LEQIDGHIAEHNSK_ 0 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 533.6054 3 530.933871 1589.77978 83052.63 0.31119 0.00016522 0.09048 4.8039E-05 0.40167 0.00021326 530.933835896436 533.605202047018 84.763 2.3477 84.763 83.541 85.889 0 698 220 5 0 0 0 1.5897E-33 4 45672 138.55 111.46 1 0.84008 1.0419 0 117840000 58025000 59816000 3426 1220 1748 1936 5590;5591;5592;5593 5591 LEQIDGHIAEHNSK 14 1 0 Unmodified _LEQIDGHIAEHNSK_ 0 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 533.9398 3 530.933871 1589.77978 82652.87 0.82526 0.00043816 -0.60242 -0.00031985 0.22284 0.00011831 531.601758452117 533.605038089544 25.47 0.41468 25.47 25.255 25.67 -1.9073E-06 102 21 7 0 0 0 0.0035258 1 11663 36.597 22.244 1 1.2421 0.95182 0 17063000 6737000 10326000 3427 1220 1748 1936 5594 5594 LEQIDGHIAEHNSK 14 1 0 Unmodified _LEQIDGHIAEHNSK_ 0 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 530.9344 3 530.933871 1589.77978 NaN NaN NaN NaN NaN NaN NaN NaN NaN 25.402 1 25.402 24.902 25.902 0 0 0 0 0.0061842 1 11650 45.723 12.038 1 3428 1220 1748 1936 5595 5595 LESFADIFLTPNK 13 1 0 Phospho (STY) _LESFADIFLT(ph)PNK_ LESFADIFLT(1)PNK LES(-52.3)FADIFLT(52.3)PNK 0 0 1 0 A0A024QZF0;Q96D88;A0A024QZB5;Q9BWN1 A0A024QZF0 A0A024QZF0 MGC3121;PRR14 Proline-rich protein 14 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 788.3807 2 787.878739 1573.74293 NaN NaN NaN -0.070349 -5.5426E-05 NaN NaN NaN NaN 132.61 0.37628 132.61 132.45 132.82 0 0 0 0 0.0009838 1 80744 78.814 51.072 2 NaN NaN 0 2818800 2818800 0 3429 11 1749 1937 5596 5596 2614 LESPSFTGTGDTEIAHATEDLENNGSK 27 1 0 Phospho (STY) _LES(ph)PSFTGTGDTEIAHATEDLENNGSK_ LES(0.978)PS(0.018)FT(0.002)GTGDTEIAHATEDLENNGSK LES(17.3)PS(-17.3)FT(-25.95)GT(-33.22)GDT(-33.22)EIAHAT(-43.5)EDLENNGS(-43.21)K 0 0 1 0 Q08J23 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 967.4238 3 967.4205 2899.23967 61345.39 0.50436 0.00048793 0.39523 0.00038235 0.89958 0.00087028 967.422465615341 970.426754775281 106.9 0.76388 106.9 106.45 107.21 0 335 60 9 0 0 0 1.5643E-09 2 62204 49.152 49.152 7 0.67598 0.8564 0 42716000 23997000 18719000 3430 1041 1750 1938 5597;5598 5597 1936 LESPTVSTLTPSSPGK 16 1 0 Phospho (STY) _LESPTVSTLTPS(ph)SPGK_ LESPTVS(0.002)T(0.008)LT(0.031)PS(0.479)S(0.479)PGK LES(-55.17)PT(-42.13)VS(-24.42)T(-17.56)LT(-11.89)PS(0)S(0)PGK 0 0 1 0 Q8NCZ0;B3KMB7;A0A087WTV6;A0A024R3Q9;Q4W8W1;A0A087WZR9;A0A0S2Z5U6;Q96C36 Q8NCZ0 Q8NCZ0 DKFZp434J218;PYCR2;P5CR2 Pyrroline-5-carboxylate reductase;Pyrroline-5-carboxylate reductase 2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 840.8732 2 840.908225 1679.8019 NaN NaN NaN 1.1095 0.00093301 NaN NaN NaN NaN 87.197 0.11444 87.197 87.114 87.228 0 0 0 0 2.7502E-06 2 47348 66.387 42.044 7 NaN NaN 0 4218500 4218500 0 3431 78 1751 1939 5599;5600 5599 102;103 LESPTVSTLTPSSPGK 16 1 0 Phospho (STY) _LESPTVSTLTPS(ph)SPGK_ LESPTVS(0.001)T(0.004)LT(0.012)PS(0.492)S(0.492)PGK LES(-46.57)PT(-40.85)VS(-27.58)T(-21.37)LT(-16.1)PS(0)S(0)PGK 0 0 1 0 Q8NCZ0;B3KMB7;A0A087WTV6;A0A024R3Q9;Q4W8W1;A0A087WZR9;A0A0S2Z5U6;Q96C36 Q8NCZ0 Q8NCZ0 DKFZp434J218;PYCR2;P5CR2 Pyrroline-5-carboxylate reductase;Pyrroline-5-carboxylate reductase 2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 840.9103 2 840.908225 1679.8019 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.351 1 87.351 86.851 87.851 0 0 0 0 0.00017186 1 47486 57.788 40.762 7 3432 78 1751 1939 5601 5601 102;103 LESPTVSTLTPSSPGK 16 1 0 Phospho (STY) _LESPTVSTLTPSS(ph)PGK_ LESPTVST(0.001)LT(0.004)PS(0.224)S(0.771)PGK LES(-67.37)PT(-59.38)VS(-35.92)T(-31.07)LT(-22.71)PS(-5.37)S(5.37)PGK 0 0 1 0 Q8NCZ0;B3KMB7;A0A087WTV6;A0A024R3Q9;Q4W8W1;A0A087WZR9;A0A0S2Z5U6;Q96C36 Q8NCZ0 Q8NCZ0 DKFZp434J218;PYCR2;P5CR2 Pyrroline-5-carboxylate reductase;Pyrroline-5-carboxylate reductase 2 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 840.9078 2 840.908225 1679.8019 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.277 1 91.277 90.777 91.777 0 0 0 0 1.7961E-07 1 58824 76.158 52.782 7 3433 78 1751 1939 5602 5602 102;103 LESTVGSPEKPLSDLGK 17 2 0 Phospho (STY) _LESTVGS(ph)PEKPLSDLGK_ LES(0.182)T(0.182)VGS(0.636)PEKPLS(0.001)DLGK LES(-5.45)T(-5.45)VGS(5.45)PEKPLS(-30.82)DLGK 0 0 1 1 H3BMX5;Q9H7Z6 H3BMX5 H3BMX5 KAT8 Histone acetyltransferase;Histone acetyltransferase KAT8 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 927.6 2 918.953164 1835.89178 66194.61 1.1402 0.0010478 0.1638 0.00015053 1.304 0.0011983 918.95369671367 926.967689331737 91.454 0.54442 91.454 91.067 91.611 7.6294E-06 132 45 5 0 0 0 0.00082843 1 50408 59.728 42.785 4 0.74126 0.90227 0 31371000 17626000 13745000 3434 867 1752 1940 5603 5603 1477;1478 LESTVGSPEKPLSDLGK 17 2 0 Phospho (STY) _LES(ph)TVGSPEKPLSDLGK_ LES(0.457)T(0.361)VGS(0.182)PEKPLSDLGK LES(1.03)T(-1.03)VGS(-4)PEKPLS(-38.22)DLGK 0 0 1 1 H3BMX5;Q9H7Z6 H3BMX5 H3BMX5 KAT8 Histone acetyltransferase;Histone acetyltransferase KAT8 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 918.954 2 918.953164 1835.89178 64494.8 1.0678 0.00098122 0.11356 0.00010436 1.1813 0.0010856 918.953256602344 926.967518359546 88.827 0.99631 88.827 88.322 89.318 0 589 98 8 0 0 0 1.8741E-05 1 57125 68.329 56.06 4 0.99636 0.77215 0 41165000 20552000 20613000 3435 867 1752 1940 5604 5604 1477;1478 LETDSRPVSR 10 0 2 Unmodified _LETDSRPVSR_ 0 0 0 1 B3KRQ2;Q86XI2;B4DHE5;B4DXB7;Q9NXD3;H0Y6U5 B3KRQ2 B3KRQ2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 387.2072 3 387.207043 1158.5993 98761.43 -0.16848 -6.5238E-05 0.064695 2.505E-05 -0.10379 -4.0188E-05 387.20702049427 393.879249595159 59.843 0.29765 59.843 59.678 59.975 0 65 21 4 0 0 0 0.027073 1 26998 50.353 17.091 1 1.0693 1.2809 0 14358000 6791700 7566600 3436 593 1753 1941 5605 5605 LETSEFFELTSEEK 14 1 0 Unmodified _LETSEFFELTSEEK_ 0 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 848.907 2 844.898708 1687.78286 NaN NaN NaN -0.070471 -5.9541E-05 NaN NaN NaN NaN 116.72 0.37984 116.72 116.44 116.82 0 0 0 0 4.2642E-07 1 69657 89.403 43.431 1 NaN NaN 0 7715900 0 7715900 3437 1232 1754 1942 5606 5606 LETSEFFELTSEEK 14 1 0 Unmodified _LETSEFFELTSEEK_ 0 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 848.9208 2 844.898708 1687.78286 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.04 1 117.04 116.54 117.54 0 0 0 0 3.757E-06 1 70059 73.781 37.822 1 3438 1232 1754 1942 5607 5607 LETSEFFELTSEEK 14 1 0 Unmodified _LETSEFFELTSEEK_ 0 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 848.9064 2 844.898708 1687.78286 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.3 1 117.3 116.8 117.8 0 0 0 0 2.6462E-05 1 70238 79.693 44.806 1 3439 1232 1754 1942 5608 5608 LETSEFFELTSEEK 14 1 0 Unmodified _LETSEFFELTSEEK_ 0 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 849.4087 2 844.898708 1687.78286 NaN NaN NaN -0.07538 -6.3689E-05 NaN NaN NaN NaN 118.8 0.43797 118.8 118.58 119.02 0 0 0 0 0.00080445 1 76557 65.395 32.17 1 NaN NaN 0 4547300 0 4547300 3440 1232 1754 1942 5609 5609 LEVQAEEERK 10 1 1 Unmodified _LEVQAEEERK_ 0 0 0 1 A8K964;Q9H307 A8K964 A8K964 PNN Pinin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 411.2164 3 410.882337 1229.62518 99155.83 0.057824 2.3759E-05 0.11286 4.637E-05 0.17068 7.0129E-05 410.882482464473 416.889873600768 64.846 0.28841 64.846 64.696 64.984 0 64 20 5 0 0 0 0.0084819 1 31002 39.917 24.773 1 1.3986 1.5854 0 21070000 9424900 11645000 3441 502 1755 1943 5610 5610 LEVQATDREENK 12 1 1 Unmodified _LEVQATDREENK_ 0 0 0 1 B9EG90;P11387;Q9BVT2 B9EG90 B9EG90 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 478.2413 3 477.907322 1430.70014 86848.08 0.27433 0.0001311 0.00025891 1.2374E-07 0.27459 0.00013123 477.907256048608 483.914838634983 61.912 0.38279 61.912 61.762 62.145 3.8147E-06 122 23 8 0 0 0 0.0038558 2 28677 60.157 37.683 1 1.1072 1.3162 0 70815000 31086000 39730000 3442 729 1756 1944 5611;5612 5611 LEVQATDREENK 12 1 1 Unmodified _LEVQATDREENK_ 0 0 0 1 B9EG90;P11387;Q9BVT2 B9EG90 B9EG90 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 716.3577 2 716.357345 1430.70014 74526.2 0.64714 0.00046358 -0.03701 -2.6512E-05 0.61013 0.00043707 716.357381357848 725.36843875389 61.9 0.33364 61.9 61.792 62.126 3.8147E-06 69 20 6 0 0 0 0.0023524 2 28759 79.201 42.645 1 1.1968 1.3365 0 16725000 6487600 10238000 3443 729 1756 1944 5613;5614 5613 LEVQATDREENK 12 1 1 Unmodified _LEVQATDREENK_ 0 0 0 1 B9EG90;P11387;Q9BVT2 B9EG90 B9EG90 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 483.9148 3 477.907322 1430.70014 86848.08 0.32152 0.00015366 -0.035592 -1.701E-05 0.28593 0.00013665 477.907281343808 483.914754930633 62.985 1.4338 62.985 62.021 63.455 0 683 117 8 0 0 0 6.2483E-09 2 29401 96.64 65.21 1 1.0572 1.2731 0 191290000 95062000 96228000 3444 729 1756 1944 5615;5616 5616 LEVQATDREENK 12 1 1 Unmodified _LEVQATDREENK_ 0 0 0 1 B9EG90;P11387;Q9BVT2 B9EG90 B9EG90 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 725.3689 2 716.357345 1430.70014 73824.58 0.69816 0.00050013 -0.16465 -0.00011795 0.5335 0.00038218 716.357372302854 725.368208577097 62.887 1.287 62.887 62.062 63.349 3.8147E-06 371 104 6 0 0 0 1.9091E-19 2 29364 134.57 106.82 1 1.1527 1.3368 0 28354000 13612000 14742000 3445 729 1756 1944 5617;5618 5618 LEVQATDREENK 12 1 1 Unmodified _LEVQATDREENK_ 0 0 0 1 B9EG90;P11387;Q9BVT2 B9EG90 B9EG90 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 477.9074 3 477.907322 1430.70014 85968.96 0.37323 0.00017837 0.32129 0.00015355 0.69452 0.00033192 477.90749469416 483.914933959353 20.088 0.31393 20.088 19.973 20.287 0 91 15 10 0 0 0 1.0895E-05 2 7003 87.641 54.552 1 1.4892 1.1491 0 80095000 31012000 49083000 3446 729 1756 1944 5619;5620 5619 LEVQATDREENK 12 1 1 Unmodified _LEVQATDREENK_ 0 0 0 1 B9EG90;P11387;Q9BVT2 B9EG90 B9EG90 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 716.358 2 716.357345 1430.70014 71630.78 0.71355 0.00051116 0.7123 0.00051026 1.4259 0.0010214 716.357717726183 725.36911663975 20.093 0.30091 20.093 19.973 20.274 0 67 14 8 0 0 0 5.077E-06 1 7043 98.898 58.547 1 1.4309 1.1035 0 55129000 21724000 33405000 3447 729 1756 1944 5621 5621 LFDDSDER 8 0 1 Phospho (STY) _LFDDS(ph)DER_ LFDDS(1)DER LFDDS(104.22)DER 0 0 1 0 O43719;B4DRS4 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 538.7 2 538.700244 1075.38593 NaN NaN NaN 0.040603 2.1873E-05 NaN NaN NaN NaN 56.795 1.2894 56.795 56.121 57.411 -3.8147E-06 0 0 0 4.1869E-11 2 24714 104.22 35.998 1 NaN NaN 0 8668600 8668600 0 3448 927 1757 1945 5622;5623 5622 1562 LFDDSDER 8 0 1 Phospho (STY) _LFDDS(ph)DER_ LFDDS(1)DER LFDDS(82.42)DER 0 0 1 0 O43719;B4DRS4 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 543.7046 2 538.700244 1075.38593 NaN NaN NaN NaN NaN NaN NaN NaN NaN 56.642 1 56.642 56.142 57.142 0 0 0 0 0.0025754 1 24628 82.417 34.814 1 3449 927 1757 1945 5624 5624 1562 LFDEEEDSSEK 11 1 0 Phospho (STY) _LFDEEEDS(ph)SEK_ LFDEEEDS(0.842)S(0.158)EK LFDEEEDS(7.28)S(-7.28)EK 0 0 1 0 O43719;B4DRS4 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 704.2643 2 704.263602 1406.51265 72545.54 0.98686 0.00069501 -0.23509 -0.00016556 0.75177 0.00052944 704.263461180194 708.270504371993 56.802 2.1515 56.802 55.624 57.776 0 786 179 6 0 0 0 7.4077E-140 5 24775 230.59 213.97 2 1.0771 1.3465 0 65067000 27848000 37219000 3450 927 1758 1946 5625;5626;5627;5628;5629 5629 1563;1564 LFDEEEDSSEK 11 1 0 Phospho (STY) _LFDEEEDS(ph)SEK_ LFDEEEDS(0.793)S(0.207)EK LFDEEEDS(5.83)S(-5.83)EK 0 0 1 0 O43719;B4DRS4 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 708.2717 2 704.263602 1406.51265 72637.86 0.94855 0.00066803 0.046292 3.2602E-05 0.99484 0.00070063 704.263585822407 708.270739107738 49.444 1.3076 49.444 48.843 50.151 3.8147E-06 697 126 8 0 0 0 1.3805E-19 2 29668 145.83 138.11 2 0.62511 0.41208 0 60567000 36787000 23780000 3451 927 1758 1946 5630;5631 5631 1563;1564 LFDEEEDSSEK 11 1 0 2 Phospho (STY) _LFDEEEDS(ph)S(ph)EK_ LFDEEEDS(1)S(1)EK LFDEEEDS(124.47)S(124.47)EK 0 0 2 0 O43719;B4DRS4 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 744.2472 2 744.246767 1486.47898 71421.38 0.8037 0.00059815 0.25436 0.00018931 1.0581 0.00078746 744.246940576136 748.253993387344 59.715 1.849 59.715 58.713 60.562 0 720 138 7 0 0 0 9.4097E-11 2 26770 124.47 111.33 1 1.3426 1.6804 0 62468000 24949000 37519000 3452 927 1758 1947 5632;5633 5633 1563;1564 LFDVCGSQDFESDLDR 16 0 1 Phospho (STY) _LFDVCGS(ph)QDFESDLDR_ LFDVCGS(0.999)QDFES(0.001)DLDR LFDVCGS(32.81)QDFES(-32.81)DLDR 0 0 1 0 E7EN38;Q32P42;Q92878 E7EN38 E7EN38 RAD50 DNA repair protein RAD50 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 992.3971 2 991.89552 1981.77649 64145.42 0.63101 0.0006259 0.45779 0.00045408 1.0888 0.00108 992.396959318554 996.899433811324 116.98 0.53134 116.98 116.7 117.23 0 174 47 6 0 0 0 8.561E-07 2 70041 79.771 69.49 2 0.647 0.76689 0 14903000 9667100 5235700 3453 787 1759 1948 5634;5635 5635 1327 LFEDDDSNEK 10 1 0 Phospho (STY) _LFEDDDS(ph)NEK_ LFEDDDS(1)NEK LFEDDDS(101.89)NEK 0 0 1 0 O43719;B4DRS4 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 646.2405 2 646.23993 1290.46531 76948.57 0.67856 0.00043852 0.17376 0.00011229 0.85232 0.0005508 646.239974288678 650.247136757675 51.148 1.7037 51.148 50.258 51.962 3.8147E-06 783 140 8 0 0 0 2.3455E-06 3 20530 113.24 88.948 1 1.2625 1.5882 0 52365000 23844000 28521000 3454 927 1760 1949 5636;5637;5638 5636 1565 LFEESDDKEDEDADGK 16 2 0 Phospho (STY) _LFEES(ph)DDKEDEDADGK_ LFEES(1)DDKEDEDADGK LFEES(44.79)DDKEDEDADGK 0 0 1 1 O43719 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 646.5892 3 641.245607 1920.71499 75525.38 0.83522 0.00053558 -0.2478 -0.0001589 0.58742 0.00037668 641.245517993807 646.588163867501 59.145 1.0515 59.145 58.515 59.566 0 463 86 9 0 0 0 0.00014662 1 26446 44.788 36.796 1 1.2831 1.6375 0 88479000 37653000 50826000 3455 927 1761 1950 5639 5639 1566 LFEESDDKEDEDADGK 16 2 0 Phospho (STY) _LFEES(ph)DDKEDEDADGK_ LFEES(1)DDKEDEDADGK LFEES(136.35)DDKEDEDADGK 0 0 1 1 O43719 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 961.3643 2 961.364773 1920.71499 61659.95 0.48264 0.00046399 0.087657 8.4271E-05 0.5703 0.00054826 961.364869712685 969.379032233508 59.136 1.5038 59.136 58.219 59.723 0 758 120 10 0 0 0 3.782E-37 2 26669 136.35 113.74 1 1.2634 1.6631 0 266130000 120430000 145710000 3456 927 1761 1950 5640;5641 5640 1566 LFEESDDKEDEDADGK 16 2 0 Phospho (STY) _LFEES(ph)DDKEDEDADGK_ LFEES(1)DDKEDEDADGK LFEES(42.12)DDKEDEDADGK 0 0 1 1 O43719 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 641.2468 3 641.245607 1920.71499 76164.34 1.1475 0.00073581 0.077977 5.0002E-05 1.2254 0.00078581 641.24563172438 646.588567942 41.198 0.89902 41.198 40.798 41.697 0 353 77 6 0 0 0 0.00037124 1 23872 42.123 25.824 1 0.5982 0.49293 0 21230000 12924000 8305800 3457 927 1761 1950 5642 5642 1566 LFFVDTGSK 9 1 0 Phospho (STY) _LFFVDT(ph)GSK_ LFFVDT(0.5)GS(0.5)K LFFVDT(0)GS(0)K 0 0 1 0 B4DVK1;B4E013;B4DND9;Q7L4X7;Q96CS0;Q53YP0;B4E1N4;Q9NZM5 B4DVK1 B4DVK1 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 547.2524 2 547.251915 1092.48928 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.27 1 117.27 116.77 117.77 0 0 0 0 0.016276 1 75575 63.408 25.322 2 3458 646 1762 1951 5643 5643 1074;2788 LFLINEQSPR 10 0 1 Phospho (STY) _LFLINEQS(ph)PR_ LFLINEQS(1)PR LFLINEQS(169.52)PR 0 0 1 0 E9PFF8;B4DDJ6;B4DJ73;B4DVN9;B4DHL5;B4E228;Q6NW34 E9PFF8 E9PFF8 C3orf17 Uncharacterized protein C3orf17 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 648.8221 2 648.821028 1295.6275 76636.48 0.82666 0.00053636 0.089277 5.7925E-05 0.91594 0.00059428 648.820937307301 653.825170377267 109.44 0.94386 109.44 108.91 109.86 0 322 70 6 0 0 0 2.1273E-40 3 64534 169.52 169.52 1 1.6007 2.0174 0 59470000 23716000 35754000 3459 615 1763 1952 5644;5645;5646 5645 1017 LFLINEQSPR 10 0 1 Phospho (STY) _LFLINEQS(ph)PR_ LFLINEQS(1)PR LFLINEQS(56.36)PR 0 0 1 0 E9PFF8;B4DDJ6;B4DJ73;B4DVN9;B4DHL5;B4E228;Q6NW34 E9PFF8 E9PFF8 C3orf17 Uncharacterized protein C3orf17 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 648.8213 2 648.821028 1295.6275 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.87 1 108.87 108.37 109.37 0 0 0 0 0.0044154 1 63894 56.359 25.809 1 3460 615 1763 1952 5647 5647 1017 LFLINEQSPR 10 0 1 Phospho (STY) _LFLINEQS(ph)PR_ LFLINEQS(1)PR LFLINEQS(103.43)PR 0 0 1 0 E9PFF8;B4DDJ6;B4DJ73;B4DVN9;B4DHL5;B4E228;Q6NW34 E9PFF8 E9PFF8 C3orf17 Uncharacterized protein C3orf17 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 653.8262 2 648.821028 1295.6275 76979.14 1.3035 0.00084575 -0.2135 -0.00013853 1.09 0.00070723 648.820762048881 653.824972170175 114.32 1.1276 114.32 113.8 114.92 -7.6294E-06 450 106 6 0 0 0 2.9108E-06 4 73831 103.43 98.468 1 1.2133 0.95516 0 14144000 6297600 7846700 3461 615 1763 1952 5648;5649;5650;5651 5651 1017 LFNLSK 6 1 0 Unmodified _LFNLSK_ 0 0 0 0 Q96DV6;A2A3R6;P62753;A2A3R5;D3DRJ5 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 365.223 2 361.215789 720.417025 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.956 1 65.956 65.456 66.456 0 0 0 0 0.033173 1 41216 77.374 8.9757 1 3462 405 1764 1953 5652 5652 LFPADTSPSTATK 13 1 0 Phospho (STY) _LFPADTS(ph)PSTATK_ LFPADT(0.178)S(0.69)PS(0.099)T(0.026)AT(0.007)K LFPADT(-5.89)S(5.89)PS(-8.45)T(-14.22)AT(-19.92)K 0 0 1 0 A8K559;Q6NZY4 A8K559 A8K559 ZCCHC8 Zinc finger CCHC domain-containing protein 8 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 712.8357 2 708.32634 1414.63813 NaN NaN NaN 0.85395 0.00060487 NaN NaN NaN NaN 77.063 0.68355 77.063 76.693 77.377 0 0 0 0 3.3343E-06 2 39994 88.092 45.375 5 NaN NaN 0 15540000 0 15540000 3463 472 1765 1954 5653;5654 5653 823 LFPADTSPSTATK 13 1 0 Phospho (STY) _LFPADTS(ph)PSTATK_ LFPADT(0.187)S(0.42)PS(0.131)T(0.131)AT(0.131)K LFPADT(-3.51)S(3.51)PS(-5.07)T(-5.07)AT(-5.07)K 0 0 1 0 A8K559;Q6NZY4 A8K559 A8K559 ZCCHC8 Zinc finger CCHC domain-containing protein 8 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 708.327 2 708.32634 1414.63813 NaN NaN NaN 1.7462 0.0012369 NaN NaN NaN NaN 77.269 0.21251 77.269 77.12 77.333 0 0 0 0 0.0073129 1 40252 45.825 22.754 5 NaN NaN 0 7192400 7192400 0 3464 472 1765 1954 5655 5655 823 LFPGSPAIYK 10 1 0 Phospho (STY) _LFPGS(ph)PAIYK_ LFPGS(0.999)PAIY(0.001)K LFPGS(31.9)PAIY(-31.9)K 0 0 1 0 D3DX73;P49792;J3KNE0;Q7Z3J3;A6NKT7;H0YBN8;C9J1W9;C9JF75;C9J6W1;F8W705;J3KQ37;F8VYC4;B4DYH0;V9HWE4;P0DJD0;P0DJD1;Q99666;O14715 D3DX73 D3DX73 hCG_1994636;RANBP2;RGPD3;RGPD4;RGPD8;RGPD5;RGPD6;RGPD1;HEL161;RGPD2 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 590.7991 2 586.791208 1171.56786 81792.21 0.83262 0.00048857 0.032832 1.9266E-05 0.86545 0.00050784 586.791282503398 591.299519861284 108.73 0.70453 108.73 108.37 109.07 0 117 55 4 0 0 0 0.013995 1 63591 48.44 27.885 2 1.7075 2.0465 0 14431000 4593900 9837100 3465 769 1766 1955 5656 5656 1296 LFQLGPPSPVK 11 1 0 Phospho (STY) _LFQLGPPS(ph)PVK_ LFQLGPPS(1)PVK LFQLGPPS(80.24)PVK 0 0 1 0 Q2VPE7;O95211;Q6IAL9;Q9NZH5;O95997 Q2VPE7 Q2VPE7 PTTG1;PTTG;PTTG2 Securin-2;Securin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 635.8381 2 631.830864 1261.64718 77396.7 0.80737 0.00051012 0.25631 0.00016195 1.0637 0.00067207 631.830843406751 635.837770142432 113.54 0.72816 113.54 113.17 113.9 -7.6294E-06 277 65 7 0 0 0 0.001038 2 67302 80.245 61.372 1 0.7163 0.89702 0 26940000 12128000 14812000 3466 941 1767 1956 5657;5658 5657 1610 LFSPLHSGTR 10 0 1 2 Phospho (STY) _LFS(ph)PLHS(ph)GTR_ LFS(1)PLHS(0.793)GT(0.207)R LFS(36.11)PLHS(5.84)GT(-5.84)R 0 0 2 0 Q03164;E9PR05 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 642.7762 2 637.770153 1273.52575 NaN NaN NaN 0.54433 0.00034715 NaN NaN NaN NaN 90.982 0.29913 90.982 90.727 91.026 0 0 0 0 0.012585 1 50114 44.511 27.299 3 NaN NaN 0 7311700 0 7311700 3467 1034 1768 1957 5659 5659 1884;1885 LFSPLHSGTR 10 0 1 2 Phospho (STY) _LFS(ph)PLHS(ph)GTR_ LFS(1)PLHS(0.791)GT(0.209)R LFS(35.7)PLHS(5.78)GT(-5.78)R 0 0 2 0 Q03164;E9PR05 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 642.7744 2 637.770153 1273.52575 NaN NaN NaN -0.4533 -0.0002891 NaN NaN NaN NaN 91.748 0.43723 91.748 91.665 92.102 0 0 0 0 0.0076205 1 50756 50.897 28.665 3 NaN NaN 0 10768000 0 10768000 3468 1034 1768 1957 5660 5660 1884;1885 LFSPLHSGTR 10 0 1 2 Phospho (STY) _LFS(ph)PLHS(ph)GTR_ LFS(1)PLHS(0.796)GT(0.205)R LFS(33.14)PLHS(5.9)GT(-5.9)R 0 0 2 0 Q03164;E9PR05 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 637.7697 2 637.770153 1273.52575 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.808 1 90.808 90.308 91.308 0 0 0 0 0.017269 1 50034 44.045 14.109 3 3469 1034 1768 1957 5661 5661 1884;1885 LFSPLHSGTR 10 0 1 2 Phospho (STY) _LFS(ph)PLHS(ph)GTR_ LFS(1)PLHS(0.959)GT(0.041)R LFS(63.1)PLHS(13.67)GT(-13.67)R 0 0 2 0 Q03164;E9PR05 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 637.7703 2 637.770153 1273.52575 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.631 1 91.631 91.131 92.131 0 0 0 0 0.00041665 1 50670 78.964 32.612 3 3470 1034 1768 1957 5662 5662 1884;1885 LFSPLHSGTR 10 0 1 Phospho (STY) _LFS(ph)PLHSGTR_ LFS(0.999)PLHS(0.001)GTR LFS(32.32)PLHS(-32.32)GT(-34.25)R 0 0 1 0 Q03164;E9PR05 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 602.7907 2 597.786988 1193.55942 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.936 1 91.936 91.436 92.436 0 0 0 0 0.015144 1 50911 42.976 9.1096 3 3471 1034 1768 1958 5663 5663 1884;1885 LFTNAVESLDEEEK 14 1 0 Phospho (STY) _LFTNAVES(ph)LDEEEK_ LFTNAVES(1)LDEEEK LFT(-128.11)NAVES(128.11)LDEEEK 0 0 1 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 852.3752 2 852.374215 1702.73388 66426.66 1.3244 0.0011289 -0.1156 -9.8536E-05 1.2088 0.0010304 852.374190867528 856.381402560347 101.27 1.2157 101.27 100.67 101.89 0 540 98 8 0 0 0 2.8002E-139 5 58368 215.48 193.14 2 0.47939 0.59478 0 112530000 75727000 36803000 3472 1120 1769 1959 5664;5665;5666;5667;5668 5667 2129 LFTNAVESLDEEEK 14 1 0 Phospho (STY) _LFTNAVES(ph)LDEEEK_ LFTNAVES(1)LDEEEK LFT(-63.99)NAVES(63.99)LDEEEK 0 0 1 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 856.3824 2 852.374215 1702.73388 65822.1 1.2041 0.0010264 0.078013 6.6496E-05 1.2821 0.0010929 852.37428912706 856.381388314005 107.24 1.2707 107.24 106.78 108.05 7.6294E-06 798 120 10 0 0 0 3.903E-08 4 69246 96.247 88.143 2 1.2006 0.80274 0 136060000 64166000 71893000 3473 1120 1769 1959 5669;5670;5671;5672 5670 2129 LFVLLPEQSPVSYSK 15 1 0 Phospho (STY) _LFVLLPEQS(ph)PVSYSK_ LFVLLPEQS(0.961)PVS(0.014)Y(0.012)S(0.014)K LFVLLPEQS(18.46)PVS(-18.46)Y(-19.15)S(-18.46)K 0 0 1 0 Q9H3L7;Q96K76 Q9H3L7 Q9H3L7 USP47 Ubiquitin carboxyl-terminal hydrolase 47 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 894.4587 2 893.954978 1785.8954 65674.39 0.93395 0.00083491 0.080268 7.1756E-05 1.0142 0.00090667 893.95500524461 897.962028092241 129.39 0.58142 129.39 129.11 129.69 0 196 49 6 0 0 0 0.0011519 3 78605 53.683 43.451 4 1.6395 1.9449 0 9770000 3548400 6221600 3474 1182 1770 1960 5673;5674;5675 5674 2330 LGAGEGGEASVSPEK 15 1 0 Phospho (STY) _LGAGEGGEASVS(ph)PEK_ LGAGEGGEAS(0.005)VS(0.995)PEK LGAGEGGEAS(-23.4)VS(23.4)PEK 0 0 1 0 J3KQ96;E7ETY2;Q13428;B4DRA2;Q9UFD4 J3KQ96 J3KQ96 TCOF1;DKFZp434G1035 Treacle protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 738.3293 2 734.321786 1466.62902 70383.04 1.0725 0.00078754 -0.2822 -0.00020723 0.79027 0.00058031 734.321855930379 738.328549027847 47.482 2.3827 47.482 46.755 49.137 0 1000 163 10 0 0 0 0 5 18517 352.27 317 2 0.55046 0.67991 0 564290000 366340000 197950000 3475 792 1771 1961 5676;5677;5678;5679;5680 5679 1347;1348 LGAGEGGEASVSPEK 15 1 0 Phospho (STY) _LGAGEGGEASVS(ph)PEK_ LGAGEGGEAS(0.01)VS(0.99)PEK LGAGEGGEAS(-19.97)VS(19.97)PEK 0 0 1 0 J3KQ96;E7ETY2;Q13428;B4DRA2;Q9UFD4 J3KQ96 J3KQ96 TCOF1;DKFZp434G1035 Treacle protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 738.3309 2 734.321786 1466.62902 70368.93 1.008 0.00074017 -0.15629 -0.00011477 0.85168 0.00062541 734.322505046742 738.328500945723 39.079 2.4722 39.079 38.479 40.951 0 1167 223 12 0 0 0 1.7999E-75 4 22337 177.04 155.13 2 0.57847 0.38518 0 1632900000 1030200000 602710000 3476 792 1771 1961 5681;5682;5683;5684 5682 1347;1348 LGAGGGSPEKSPSAQELK 18 2 0 2 Phospho (STY) _LGAGGGS(ph)PEKS(ph)PSAQELK_ LGAGGGS(1)PEKS(0.995)PS(0.005)AQELK LGAGGGS(62.33)PEKS(23.01)PS(-23.01)AQELK 0 0 2 1 Q9UNE7;H3BS86 Q9UNE7 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 945.4266 2 936.910646 1871.80674 63229.04 0.55012 0.00051541 0.15005 0.00014058 0.70017 0.00065599 936.911026311856 944.925028067867 54.229 1.9213 54.229 53.239 55.161 0 882 155 10 0 0 0 1.2571E-11 3 23242 90.654 79.171 3 1.6613 2.1635 0 181440000 68348000 113090000 3477 1241 1772 1962 5685;5686;5687 5687 2543;2544 LGAGGGSPEKSPSAQELK 18 2 0 2 Phospho (STY) _LGAGGGS(ph)PEKS(ph)PSAQELK_ LGAGGGS(0.987)PEKS(0.935)PS(0.078)AQELK LGAGGGS(18.66)PEKS(11.52)PS(-11.52)AQELK 0 0 2 1 Q9UNE7;H3BS86 Q9UNE7 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 630.286 3 624.942856 1871.80674 75821.43 0.55394 0.00034618 -0.031338 -1.9584E-05 0.5226 0.0003266 624.942935914833 630.285771716144 54.267 1.2603 54.267 53.72 54.981 0 314 98 6 0 0 0 0.00016525 1 23178 42.705 33.168 3 1.6982 2.1367 0 53342000 16623000 36719000 3478 1241 1772 1962 5688 5688 2543;2544 LGAMDIDTHK 10 1 0 Oxidation (M) _LGAM(ox)DIDTHK_ LGAM(1)DIDTHK LGAM(55.08)DIDTHK 0 1 0 0 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 375.5216 3 372.849979 1115.52811 97453.66 -0.035421 -1.3207E-05 -0.61503 -0.00022931 -0.65045 -0.00024252 372.849873613794 375.521170970573 65.262 0.21481 65.262 65.149 65.364 0 51 15 5 0 0 0 0.0031718 1 31357 55.084 32.504 1 1.0425 1.2759 0 19934000 10502000 9431700 3479 1069 1773 1963 5689 5689 309 LGEHNIDVLEGNEQFINAAK 20 1 0 Unmodified _LGEHNIDVLEGNEQFINAAK_ 0 0 0 0 CON__P00761 CON__P00761 CON__P00761 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 737.7065 3 737.706197 2210.09676 NaN NaN NaN -0.18273 -0.0001348 NaN NaN NaN NaN 119.44 2.116 119.44 118.85 120.97 0 0 0 0 2.1634E-59 4 71960 141.6 124.58 1 NaN NaN 0 26540000 26540000 0 + 3480 750 1774 1964 5690;5691;5692;5693 5691 LGEHNIDVLEGNEQFINAAK 20 1 0 Unmodified _LGEHNIDVLEGNEQFINAAK_ 0 0 0 0 CON__P00761 CON__P00761 CON__P00761 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 738.0403 3 737.706197 2210.09676 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.85 1 118.85 118.35 119.35 0 0 0 0 0.0077281 1 71385 43.164 33.107 1 + 3481 750 1774 1964 5694 5694 LGEHNIDVLEGNEQFINAAK 20 1 0 Unmodified _LGEHNIDVLEGNEQFINAAK_ 0 0 0 0 CON__P00761 CON__P00761 CON__P00761 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 738.0422 3 737.706197 2210.09676 NaN NaN NaN -0.031007 -2.2874E-05 NaN NaN NaN NaN 109.59 0.82541 109.59 109.25 110.08 0 0 0 0 0.0030362 1 70361 43.696 34.443 1 NaN NaN 0 13917000 13917000 0 + 3482 750 1774 1964 5695 5695 LGELTMQLHPVADSSPAGAK 20 1 0 Oxidation (M),Phospho (STY) _LGELTM(ox)QLHPVADS(ph)SPAGAK_ LGELTM(1)QLHPVADSSPAGAK LGELT(0.004)MQLHPVADS(0.498)S(0.498)PAGAK LGELTM(53.09)QLHPVADSSPAGAK LGELT(-20.82)MQLHPVADS(0)S(0)PAGAK 0 1 1 0 F8W038;H0YIS7;Q8IXM2 F8W038 F8W038 C17orf49;RNASEK-C17orf49;BAP18 Chromatin complexes subunit BAP18 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 709.3422 3 706.669417 2116.98642 73773.12 0.79763 0.00056366 -0.0032493 -2.2961E-06 0.79438 0.00056137 707.003628039675 709.340867857869 88.623 0.93481 88.623 88.131 89.066 -7.6294E-06 437 83 9 0 0 0 1.9927E-05 2 48274 53.089 53.089 3 0.9773 1.2275 0 55106000 27663000 27443000 3483 830 1775 1965 5696;5697 5696 226 1432;1433 LGFKSPTSK 9 2 0 Phospho (STY) _LGFKS(ph)PTSK_ LGFKS(0.826)PT(0.146)S(0.028)K LGFKS(7.54)PT(-7.54)S(-14.68)K 0 0 1 1 Q6IEH8;Q6KC79;A8K2T2;A6QL62 Q6IEH8 Q6IEH8 NIPBL Nipped-B-like protein ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 522.759 2 522.759907 1043.50526 NaN NaN NaN 0.095623 4.9988E-05 NaN NaN NaN NaN 31.539 0.51044 31.539 31.279 31.79 -1.9073E-06 0 0 0 0.016493 1 16679 62.799 40.113 3 NaN NaN 0 7333200 7333200 0 3484 1118 1776 1966 5698 5698 2121 LGFSLTPSK 9 1 0 2 Phospho (STY) _LGFS(ph)LT(ph)PSK_ LGFS(0.989)LT(0.821)PS(0.19)K LGFS(18.65)LT(6.55)PS(-6.55)K 0 0 2 0 P38432 P38432 P38432 COIL Coilin MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 555.2374 2 555.237623 1108.46069 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.78 1 109.78 109.28 110.28 0 0 0 0 0.020781 1 64667 43.501 34.179 3 3485 987 1777 1967 5699 5699 1748;2883 LGFSLTPSK 9 1 0 Phospho (STY) _LGFSLT(ph)PSK_ LGFS(0.031)LT(0.812)PS(0.157)K LGFS(-14.18)LT(7.15)PS(-7.15)K 0 0 1 0 P38432 P38432 P38432 COIL Coilin MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 515.2551 2 515.254458 1028.49436 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.28 1 104.28 103.78 104.78 0 0 0 0 0.01709 1 67115 62.466 31.902 3 3486 987 1777 1968 5700 5700 1748;2883 LGGLRPESPESLTSVSR 17 0 2 Phospho (STY) _LGGLRPES(ph)PESLTSVSR_ LGGLRPES(0.996)PES(0.002)LT(0.002)SVSR LGGLRPES(27.28)PES(-27.28)LT(-28.11)S(-36.01)VS(-43.61)R 0 0 1 1 Q6ZW18;Q9H6F5;H0YG79 Q6ZW18;Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 932.9628 2 932.961855 1863.90916 62604.21 1.1444 0.0010677 -0.21053 -0.00019642 0.93385 0.00087124 932.961774710529 942.969910345515 95.98 1.8585 95.98 95.071 96.929 0 1090 160 11 0 0 0 3.3303E-07 3 53966 79.805 66.142 5 0.70344 0.88428 0 1059700000 620800000 438880000 3487 1207;1129 1778 1969 5701;5702;5703 5702 2156;2157 LGGLRPESPESLTSVSR 17 0 2 Phospho (STY) _LGGLRPES(ph)PESLTSVSR_ LGGLRPES(1)PESLTSVSR LGGLRPES(33.06)PES(-33.06)LT(-54.52)S(-60.35)VS(-60.46)R 0 0 1 1 Q6ZW18;Q9H6F5;H0YG79 Q6ZW18;Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 622.6453 3 622.310329 1863.90916 76308.6 1.1241 0.00069954 -0.61327 -0.00038164 0.51083 0.0003179 622.310157154667 628.982252745106 95.884 1.8851 95.884 95.125 97.011 0 1052 162 11 0 0 0 2.1326E-12 2 54483 93.804 72.406 5 0.64356 0.80832 0 863650000 519530000 344120000 3488 1207;1129 1778 1969 5704;5705 5705 2156;2157 LGGLRPESPESLTSVSR 17 0 2 Phospho (STY) _LGGLRPES(ph)PESLTSVSR_ LGGLRPES(0.994)PES(0.006)LTSVSR LGGLRPES(22.36)PES(-22.36)LT(-48.01)S(-53.18)VS(-52.44)R 0 0 1 1 Q6ZW18;Q9H6F5;H0YG79 Q6ZW18;Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 629.3173 3 622.310329 1863.90916 76043.26 0.76486 0.00047598 0.076698 4.773E-05 0.84156 0.00052371 622.31062451014 628.982488034682 93.291 1.4941 93.291 92.765 94.259 7.6294E-06 1178 144 13 0 0 0 1.0294E-05 2 60441 67.76 60.249 5 0.54036 0.47404 0 523360000 337460000 185910000 3489 1207;1129 1778 1969 5706;5707 5707 2156;2157 LGGLRPESPESLTSVSR 17 0 2 2 Phospho (STY) _LGGLRPES(ph)PES(ph)LTSVSR_ LGGLRPES(1)PES(0.993)LT(0.006)S(0.001)VSR LGGLRPES(53.6)PES(22.19)LT(-22.19)S(-30.04)VS(-44.98)R 0 0 2 1 Q6ZW18;Q9H6F5;H0YG79 Q6ZW18;Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 972.9449 2 972.94502 1943.87549 61295.66 0.609 0.00059252 -0.3233 -0.00031455 0.2857 0.00027797 972.944817548796 982.953070354721 99.024 1.9266 99.024 98.422 100.35 0 1207 158 13 0 0 0 1.1986E-12 4 56119 98.165 82.027 10 0.59267 0.74652 0 1705600000 1059300000 646280000 3490 1207;1129 1778 1970 5708;5709;5710;5711 5709 2156;2157 LGGLRPESPESLTSVSR 17 0 2 2 Phospho (STY) _LGGLRPES(ph)PES(ph)LTSVSR_ LGGLRPES(0.999)PES(0.973)LT(0.017)S(0.005)VS(0.006)R LGGLRPES(34.07)PES(17.79)LT(-17.79)S(-22.98)VS(-22.18)R 0 0 2 1 Q6ZW18;Q9H6F5;H0YG79 Q6ZW18;Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 648.9664 3 648.965772 1943.87549 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.83 1 104.83 104.33 105.33 0 0 0 0 0.00045777 1 67450 54.728 41.101 10 3491 1207;1129 1778 1970 5712 5712 2156;2157 LGHVVMGNNAVSPYQQVIEK 20 1 0 Oxidation (M),Phospho (STY) _LGHVVM(ox)GNNAVS(ph)PYQQVIEK_ LGHVVM(1)GNNAVSPYQQVIEK LGHVVMGNNAVS(0.991)PY(0.009)QQVIEK LGHVVM(73.14)GNNAVSPYQQVIEK LGHVVMGNNAVS(20.32)PY(-20.32)QQVIEK 0 1 1 0 H0YAW4;E5RGA2;B3KW56;Q6IAX5;P60228 H0YAW4 H0YAW4 EIF3E Eukaryotic translation initiation factor 3 subunit E ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 763.3742 3 760.367849 2278.08172 NaN NaN NaN -0.054162 -4.1183E-05 NaN NaN NaN NaN 93.953 0.42849 93.953 93.767 94.195 0 0 0 0 3.1811E-11 3 52409 73.138 60.474 2 NaN NaN 0 8911700 0 8911700 3492 605 1779 1971 5713;5714;5715 5713 158 994 LGIHEDSQNR 10 0 1 Unmodified _LGIHEDSQNR_ 0 0 0 0 Q2VPJ6;K9JA46;P07900;Q8TBA7;Q86U12;O75322;Q96HX7 Q2VPJ6 Q2VPJ6 HSP90AA1;EL52 Heat shock protein HSP 90-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 390.195 3 390.195026 1167.56325 95885 -0.39732 -0.00015503 1.5007 0.00058557 1.1034 0.00043054 390.194852950387 393.531153644613 66.873 0.32173 66.873 66.725 67.047 0 78 22 7 0 0 0 0.017992 1 32724 32.523 24.878 1 2.9998 3.7639 0 41682000 11046000 30635000 3493 906 1780 1972 5716 5716 LGIHEDSQNRK 11 1 1 Unmodified _LGIHEDSQNRK_ 0 0 0 1 Q2VPJ6;K9JA46;P07900;Q8TBA7;Q86U12;O75322;Q96HX7 Q2VPJ6 Q2VPJ6 HSP90AA1;EL52 Heat shock protein HSP 90-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 432.8927 3 432.893347 1295.65821 90381.39 0.11931 5.1647E-05 0.13044 5.6465E-05 0.24974 0.00010811 432.89319872049 438.900788896638 80.115 0.8879 80.115 79.524 80.412 0 259 82 5 0 0 0 0.016727 1 42256 30.068 24.035 1 3.6687 4.3636 0 73839000 16137000 57702000 3494 906 1781 1973 5717 5717 LGIHEDSTNR 10 0 1 Unmodified _LGIHEDSTNR_ 0 0 0 0 A0A024RD80;P08238;B4DMA2;B4DGL0;Q9H6X9;A8K3W9 A0A024RD80 A0A024RD80 HSP90AB1 Heat shock protein HSP 90-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 381.191 3 381.191393 1140.55235 95551.8 0.035448 1.3512E-05 0.047343 1.8047E-05 0.08279 3.1559E-05 381.191301349758 384.527535927648 67.706 0.7272 67.706 67.286 68.014 0 278 62 9 0 0 0 0.00011586 1 33299 88.681 74.014 1 2.2759 2.8805 0 386070000 129710000 256360000 3495 223 1782 1974 5718 5718 LGKEIIYMK 9 2 0 Oxidation (M) _LGKEIIYM(ox)K_ LGKEIIYM(1)K LGKEIIYM(47.96)K 0 1 0 1 REV__Q16280 REV__Q16280 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 370.8804 3 370.879099 1109.61547 97598.14 -0.0032682 -1.2121E-06 3.3197 0.0012312 3.3164 0.00123 370.880325516399 376.223004131928 82.551 1.8934 82.55 81.767 83.661 -7.6294E-06 617 175 7 0 0 0 0.034885 1 43873 47.96 40.809 1 0.88561 1.1698 0 300550000 157030000 143520000 + 3496 1267 1783 1975 5719 5719 367 LGLHVTPSNVDQVSTPPAAK 20 1 0 Phospho (STY) _LGLHVTPSNVDQVS(ph)TPPAAK_ LGLHVTPSNVDQVS(0.5)T(0.5)PPAAK LGLHVT(-54.45)PS(-51.53)NVDQVS(0)T(0)PPAAK 0 0 1 0 B3KND8;D3DS96;Q9NRL2 B3KND8 B3KND8 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 707.3621 3 704.355938 2110.04598 NaN NaN NaN 0.013275 9.3503E-06 NaN NaN NaN NaN 97.143 1.0823 97.143 96.592 97.674 0 0 0 0 2.0474E-09 1 54774 63.578 53.79 4 NaN NaN 0 113040000 0 113040000 3497 582 1784 1976 5720 5720 965;2769 LGLLDTQTSQVLTAVDK 17 1 0 Phospho (STY) _LGLLDT(ph)QTSQVLTAVDK_ LGLLDT(0.329)QT(0.329)S(0.329)QVLT(0.013)AVDK LGLLDT(0)QT(0)S(0)QVLT(-14.05)AVDK 0 0 1 0 A0A087X1U6;P58107;A0A075B730 A0A087X1U6 A0A087X1U6 EPPK1 Epiplakin ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 945.4891 2 941.482089 1880.94962 NaN NaN NaN 0.23856 0.0002246 NaN NaN NaN NaN 127.1 0.32764 127.1 126.9 127.23 0 0 0 0 0.005125 1 77078 42.809 28.652 4 NaN NaN 0 3378400 0 3378400 3498 273 1785 1977 5721 5721 436;2673;2674 LGLQEGSNNSSPVDFVNNK 19 1 0 Phospho (STY) _LGLQEGSNNS(ph)SPVDFVNNK_ LGLQEGS(0.087)NNS(0.456)S(0.456)PVDFVNNK LGLQEGS(-7.19)NNS(0)S(0)PVDFVNNK 0 0 1 0 A8K8N3;Q96R06 A8K8N3 A8K8N3 SPAG5 Sperm-associated antigen 5 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1049.9766 2 1049.97569 2097.93683 NaN NaN NaN 0.2529 0.00026554 NaN NaN NaN NaN 100.37 0.24957 100.37 100.31 100.56 0 0 0 0 0.00020815 1 57485 47.915 28.879 3 NaN NaN 0 5547300 5547300 0 3499 496 1786 1978 5722 5722 850;851 LGNDFHTNK 9 1 0 Unmodified _LGNDFHTNK_ 0 0 0 0 H0YN73;H0YN88;A0A075B716;H3BNC9;P08708 H0YN73 H0YN73 RPS17 40S ribosomal protein S17 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 349.1735 3 349.173562 1044.49886 101457.4 -0.31816 -0.00011109 0.54205 0.00018927 0.22389 7.8177E-05 349.174189355704 351.844858169633 65.997 1.1479 65.997 65.161 66.309 0 234 87 8 0 0 0 0.00896 2 31926 44.82 34.732 1 1.0676 1.3214 0 214420000 98035000 116380000 3500 239 1787 1979 5723;5724 5724 LGNDFHTNK 9 1 0 Unmodified _LGNDFHTNK_ 0 0 0 0 H0YN73;H0YN88;A0A075B716;H3BNC9;P08708 H0YN73 H0YN73 RPS17 40S ribosomal protein S17 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 527.2637 2 523.256705 1044.49886 86044.04 0.28584 0.00014957 -0.022896 -1.198E-05 0.26295 0.00013759 523.256314096376 527.263219485585 65.987 0.35043 65.987 65.762 66.113 0 117 27 7 0 0 0 1.793E-08 1 31969 131.22 67.66 1 1.0878 1.3707 0 49954000 23113000 26842000 3501 239 1787 1979 5725 5725 LGPGRPLPTFPTSECTSDVEPDTR 24 0 2 Phospho (STY) _LGPGRPLPTFPTSECTS(ph)DVEPDTR_ LGPGRPLPT(0.003)FPT(0.03)S(0.026)ECT(0.246)S(0.692)DVEPDT(0.003)R LGPGRPLPT(-23.74)FPT(-13.65)S(-14.2)ECT(-4.48)S(4.48)DVEPDT(-24.11)R 0 0 1 1 Q8TDD1;H0YHZ9 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 904.0809 3 903.745713 2708.21531 64052.12 1.2477 0.0011276 -0.010325 -9.3307E-06 1.2374 0.0011183 904.080103353312 910.752226686857 109.23 1.0988 109.23 108.71 109.81 7.6294E-06 981 110 13 0 0 0 6.0265E-06 1 70150 41.83 34.027 6 1.1554 1.0042 0 78412000 35337000 43075000 3502 1162 1788 1980 5726 5726 2245 LGPQNFIDETSDIENLLK 18 1 0 Phospho (STY) _LGPQNFIDETS(ph)DIENLLK_ LGPQNFIDET(0.051)S(0.949)DIENLLK LGPQNFIDET(-12.7)S(12.7)DIENLLK 0 0 1 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1064.0093 2 1063.50629 2124.99803 56184.07 0.76406 0.00081258 -0.45542 -0.00048434 0.30864 0.00032824 1064.00756464486 1067.51368605387 133.62 0.10434 133.62 133.54 133.64 0 16 2 8 0 0 0 7.1478E-174 3 81431 225.01 225.01 2 0.65663 0.81615 0 89581000 52882000 36699000 3503 1062 1789 1981 5727;5728;5729 5728 1999 LGSGAAAAAAAAEAAEAR 18 0 1 Phospho (STY) _LGS(ph)GAAAAAAAAEAAEAR_ LGS(1)GAAAAAAAAEAAEAR LGS(46.87)GAAAAAAAAEAAEAR 0 0 1 0 REV__E9PJD7 REV__E9PJD7 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 804.8748 2 804.872508 1607.73046 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.288 1 87.288 86.788 87.788 0 0 0 0 0.0020618 1 47434 46.873 22.581 1 + 3504 1270 1790 1982 5730 5730 2606 LGSPDYGNSALLSLPGYR 18 0 1 Phospho (STY) _LGS(ph)PDYGNSALLSLPGYR_ LGS(0.68)PDY(0.289)GNS(0.032)ALLSLPGYR LGS(3.72)PDY(-3.72)GNS(-13.32)ALLS(-38.07)LPGY(-43.38)R 0 0 1 0 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q96HN5;H0YFY6;Q7Z757;Q59HB8;Q9UNL7 A0A087WY61 A0A087WY61 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 985.9724 2 980.46423 1958.91391 NaN NaN NaN 0.4434 0.00043473 NaN NaN NaN NaN 124.71 0.25063 124.71 124.65 124.9 0 0 0 0 0.0014093 1 75667 43.382 35.078 5 NaN NaN 0 1965700 0 1965700 3505 110 1791 1983 5731 5731 146 LGSPDYGNSALLSLPGYRPTTR 22 0 2 Phospho (STY) _LGS(ph)PDYGNSALLSLPGYRPTTR_ LGS(0.999)PDYGNSALLSLPGYRPTTR LGS(33.15)PDY(-33.15)GNS(-41.12)ALLS(-50.93)LPGY(-52.82)RPT(-50.88)T(-50.88)R 0 0 1 1 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q96HN5;H0YFY6;Q7Z757;Q59HB8;Q9UNL7 A0A087WY61 A0A087WY61 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 806.3985 3 805.728323 2414.16314 67200.55 0.84703 0.00068247 -0.055 -4.4315E-05 0.79203 0.00063816 805.728293502766 812.734680667361 119.48 0.88895 119.48 119.1 119.99 0 480 77 9 0 0 0 1.195E-07 2 72089 52.909 52.909 7 0.67617 0.83962 0 54815000 29758000 25057000 3506 110 1792 1984 5732;5733 5733 146 LGSPDYGNSALLSLPGYRPTTR 22 0 2 Phospho (STY) _LGS(ph)PDYGNSALLSLPGYRPTTR_ LGS(0.996)PDY(0.003)GNS(0.001)ALLSLPGYRPTTR LGS(25.1)PDY(-25.1)GNS(-30.96)ALLS(-47.5)LPGY(-57.8)RPT(-55.44)T(-55.44)R 0 0 1 1 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q96HN5;H0YFY6;Q7Z757;Q59HB8;Q9UNL7 A0A087WY61 A0A087WY61 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 806.0643 3 805.728323 2414.16314 67306.78 1.1868 0.0009562 0.10508 8.4667E-05 1.2918 0.0010409 806.062840496979 812.734821140868 122.63 1.3134 122.63 121.88 123.19 0 838 121 14 0 0 0 2.9435E-09 2 79125 57.803 49.811 7 1.4855 1.2985 0 252190000 102800000 149390000 3507 110 1792 1984 5734;5735 5734 146 LGSVSLDLCDGDTGEPR 17 0 1 Phospho (STY) _LGS(ph)VSLDLCDGDTGEPR_ LGS(0.993)VS(0.007)LDLCDGDTGEPR LGS(21.48)VS(-21.48)LDLCDGDT(-75.63)GEPR 0 0 1 0 B3KNM8;B4E2X3;C4B4C6;B3KNI0;Q8N6R0 B3KNM8 B3KNM8 feat;METTL13 Methyltransferase-like protein 13 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 940.9019 2 935.898063 1869.78157 NaN NaN NaN -0.62569 -0.00058559 NaN NaN NaN NaN 106.57 0.36378 106.57 106.33 106.69 0 0 0 0 3.9563E-08 1 61957 83.54 61.443 3 NaN NaN 0 4864800 0 4864800 3508 583 1793 1985 5736 5736 967 LGVSVSPSR 9 0 1 Phospho (STY) _LGVSVS(ph)PSR_ LGVS(0.001)VS(0.851)PS(0.148)R LGVS(-29.95)VS(7.58)PS(-7.58)R 0 0 1 0 E7ERS3;B4DTK7;Q86VM9;Q86YU5;H3BP01 E7ERS3 E7ERS3 ZC3H18;FLJ00419 Zinc finger CCCH domain-containing protein 18 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 496.2459 2 491.241882 980.469211 86356.34 0.25297 0.00012427 0.20637 0.00010138 0.45934 0.00022565 491.241891416314 496.24609789644 62.342 1.2838 62.342 61.679 62.963 0 410 94 6 0 0 0 6.5062E-05 3 29365 94.767 36.596 3 0.91234 1.1525 0 133290000 65043000 68249000 3509 660 1794 1986 5737;5738;5739 5739 1097;1098 LGVSVSPSR 9 0 1 Phospho (STY) _LGVSVS(ph)PSR_ LGVS(0.004)VS(0.808)PS(0.188)R LGVS(-23.55)VS(6.32)PS(-6.32)R 0 0 1 0 E7ERS3;B4DTK7;Q86VM9;Q86YU5;H3BP01 E7ERS3 E7ERS3 ZC3H18;FLJ00419 Zinc finger CCCH domain-containing protein 18 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 491.2423 2 491.241882 980.469211 87007.41 0.66625 0.00032729 -0.037888 -1.8612E-05 0.62836 0.00030868 491.241768274649 496.245990237189 55.918 1.6385 55.918 55.058 56.697 3.8147E-06 595 138 6 0 0 0 3.3652E-05 4 34259 116.55 45.096 3 0.59268 0.41739 0 32441000 20346000 12095000 3510 660 1794 1986 5740;5741;5742;5743 5742 1097;1098 LGVTNTIISHYDGR 14 0 1 Unmodified _LGVTNTIISHYDGR_ 0 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 519.275 3 515.938845 1544.79471 84606.07 0.56189 0.0002899 -0.5594 -0.00028861 0.002489 1.2842E-06 515.938338039093 519.274979644719 105.88 0.72749 105.88 105.54 106.27 7.6294E-06 188 48 6 0 0 0 3.9859E-06 1 61518 82.55 52.112 1 0.74962 0.91661 0 21894000 13919000 7975100 3511 995 1795 1987 5744 5744 LGYLVSPPQQIR 12 0 1 Phospho (STY) _LGYLVS(ph)PPQQIR_ LGY(0.001)LVS(0.999)PPQQIR LGY(-30.27)LVS(30.27)PPQQIR 0 0 1 0 H3BSK8;B4DZQ0;Q7Z6E9 H3BSK8 H3BSK8 RBBP6 E3 ubiquitin-protein ligase RBBP6 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 725.876 2 725.876334 1449.73812 NaN NaN NaN -0.48437 -0.00035159 NaN NaN NaN NaN 110.01 0.6277 110.01 109.61 110.24 -7.6294E-06 0 0 0 0.01027 1 64572 46.985 33.849 2 NaN NaN 0 7631600 7631600 0 3512 675 1796 1988 5745 5745 1119 LGYLVSPPQQIR 12 0 1 Phospho (STY) _LGYLVS(ph)PPQQIR_ LGY(0.001)LVS(0.999)PPQQIR LGY(-30.14)LVS(30.14)PPQQIR 0 0 1 0 H3BSK8;B4DZQ0;Q7Z6E9 H3BSK8 H3BSK8 RBBP6 E3 ubiquitin-protein ligase RBBP6 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 731.3799 2 725.876334 1449.73812 NaN NaN NaN -3.1687 -0.0023001 NaN NaN NaN NaN 110.08 0.53075 110.08 109.71 110.24 0 0 0 0 0.017062 1 64846 40.516 23.285 2 NaN NaN 0 9646300 0 9646300 3513 675 1796 1988 5746 5746 1119 LGYLVSPPQQIR 12 0 1 Phospho (STY) _LGYLVS(ph)PPQQIR_ LGYLVS(1)PPQQIR LGY(-34.4)LVS(34.4)PPQQIR 0 0 1 0 H3BSK8;B4DZQ0;Q7Z6E9 H3BSK8 H3BSK8 RBBP6 E3 ubiquitin-protein ligase RBBP6 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 730.8809 2 725.876334 1449.73812 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.77 1 109.77 109.27 110.27 0 0 0 0 0.0039545 1 64651 47.991 39.033 2 3514 675 1796 1988 5747 5747 1119 LHDFLAHSSEESEETSSPPR 20 0 1 Phospho (STY) _LHDFLAHSSEESEETS(ph)SPPR_ LHDFLAHSSEESEET(0.057)S(0.472)S(0.472)PPR LHDFLAHS(-59.57)S(-54.04)EES(-41.69)EET(-9.22)S(0)S(0)PPR 0 0 1 0 A4LAA3;P46100;A0A096LNL9;A0A096LNW1;Q86U63;A0A087WWG0 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 782.6723 3 779.00066 2333.98015 68912.49 1.5132 0.0011788 0.037923 2.9542E-05 1.5511 0.0012083 779.334981541469 782.33676134254 100.9 0.77522 100.9 100.39 101.16 0 298 57 9 0 0 0 6.6729E-15 2 57821 90.545 84.839 6 0.61349 0.77456 0 96795000 57712000 39083000 3515 422 1797 1989 5748;5749 5749 724;725 LHDFLAHSSEESEETSSPPR 20 0 1 Phospho (STY) _LHDFLAHSSEESEETSS(ph)PPR_ LHDFLAHSSEESEET(0.003)S(0.091)S(0.906)PPR LHDFLAHS(-58.85)S(-58.85)EES(-51.38)EET(-24.54)S(-9.96)S(9.96)PPR 0 0 1 0 A4LAA3;P46100;A0A096LNL9;A0A096LNW1;Q86U63;A0A087WWG0 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 587.0054 4 584.502314 2333.98015 79253.8 1.5143 0.00088508 -0.12747 -7.4507E-05 1.3868 0.00081058 584.752939587018 587.255009898102 100.91 0.54475 100.91 100.55 101.09 7.6294E-06 191 40 9 0 0 0 1.8065E-09 1 57931 70.699 70.699 6 0.62915 0.79115 0 43379000 29622000 13757000 3516 422 1797 1989 5750 5750 724;725 LHDFLAHSSEESEETSSPPR 20 0 1 Phospho (STY) _LHDFLAHSSEESEETSS(ph)PPR_ LHDFLAHSSEESEET(0.01)S(0.262)S(0.729)PPR LHDFLAHS(-51.35)S(-51.35)EES(-37.94)EET(-18.8)S(-4.45)S(4.45)PPR 0 0 1 0 A4LAA3;P46100;A0A096LNL9;A0A096LNW1;Q86U63;A0A087WWG0 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 782.338 3 779.00066 2333.98015 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.462 1 70.462 69.962 70.962 0 0 0 0 1.7879E-10 1 44464 73.153 63.747 6 3517 422 1797 1989 5751 5751 724;725 LHEAHFK 7 1 0 Unmodified _LHEAHFK_ 0 0 0 0 A8K4B4;Q9BXS6;H0YMD2 A8K4B4 A8K4B4 NUSAP1 Nucleolar and spindle-associated protein 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 441.2347 2 441.235045 880.455536 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.169 1 98.169 97.669 98.669 0 0 0 0 0.020711 1 55711 76.847 36.161 1 3518 458 1798 1990 5752 5752 LHEDHLER 8 0 1 Unmodified _LHEDHLER_ 0 0 0 0 E9PI41;Q9NPD3 E9PI41 E9PI41 EXOSC4 Exosome complex component RRP41 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 350.1768 3 350.177195 1047.50976 105138.3 -0.41613 -0.00014572 0.62654 0.0002194 0.21041 7.368E-05 350.177316381563 353.513315184495 84.174 0.30086 84.174 84.049 84.35 7.6294E-06 62 25 4 0 0 0 0.0039751 1 45232 65.305 36.144 1 0.9316 1.1079 0 15615000 8694700 6920000 3519 802 1799 1991 5753 5753 LHGELQDR 8 0 1 Unmodified _LHGELQDR_ 0 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 323.17 3 323.170041 966.488293 105763.8 -0.49473 -0.00015988 0.72264 0.00023354 0.22792 7.3655E-05 323.17020877243 326.506299200764 68.14 0.3739 68.14 68.014 68.388 0 123 30 6 0 0 0 0.0025714 3 33717 77.058 39.499 1 1.1429 1.439 0 51789000 23801000 27988000 3520 1214 1800 1992 5754;5755;5756 5754 LHGELQDR 8 0 1 Unmodified _LHGELQDR_ 0 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 489.2561 2 484.251423 966.488293 NaN NaN NaN 0.21707 0.00010512 NaN NaN NaN NaN 68.16 0.54427 68.16 67.993 68.537 0 0 0 0 0.03192 1 33663 46.426 12.687 1 NaN NaN 0 47719000 0 47719000 3521 1214 1800 1992 5757 5757 LHGELQDRK 9 1 1 Unmodified _LHGELQDRK_ 0 0 0 1 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 371.8764 3 365.868362 1094.58326 100638.5 0.032373 1.1844E-05 0.1945 7.1161E-05 0.22687 8.3005E-05 365.868320319153 371.876014709378 79.879 0.88152 79.879 79.47 80.352 0 256 81 5 0 0 0 0.0013614 1 42142 67.881 45.542 1 1.1864 1.3888 0 36362000 16400000 19962000 3522 1214 1801 1993 5758 5758 LHHYSDF 7 0 0 Unmodified _LHHYSDF_ 0 0 0 0 Q9Y5J1 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog ISO-MSMS -1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 459.7088 2 459.70886 917.403166 NaN NaN NaN 0.062294 2.8637E-05 NaN NaN NaN NaN 109.04 1.7517 109.04 108.42 110.17 0 0 0 0 0.020302 1 63989 57.453 42.677 1 3523 1255 1802 1994 5759 5759 LHIFNAK 7 1 0 Unmodified _LHIFNAK_ 0 0 0 0 A0A0D9SGE8;Q5JRC6;Q8IWS0 A0A0D9SGE8;Q8IWS0 Q8IWS0 PHF6 PHD finger protein 6 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 421.7473 2 421.747788 841.481023 NaN NaN NaN NaN NaN NaN NaN NaN NaN 107.4 1 107.4 106.9 107.9 0 0 0 0 0.0042466 1 62686 85.306 4.0094 1 3524 335;1145 1803 1995 5760 5760 LHNQQALSSSIEEGLR 16 0 1 Phospho (STY) _LHNQQALSSS(ph)IEEGLR_ LHNQQALS(0.013)S(0.207)S(0.781)IEEGLR LHNQQALS(-17.83)S(-5.77)S(5.77)IEEGLR 0 0 1 0 B4DVB5;Q06587;A0A024RCR9;B4DW57 B4DVB5 B4DVB5 RING1 E3 ubiquitin-protein ligase RING1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 624.6353 3 621.298312 1860.87311 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.92 1 90.92 90.42 91.42 7.6294E-06 0 0 0 0.00024942 1 50117 53.453 42.968 3 3525 665 1804 1996 5761 5761 1109;1110 LHNQQALSSSIEEGLR 16 0 1 Phospho (STY) _LHNQQALSS(ph)SIEEGLR_ LHNQQALS(0.152)S(0.424)S(0.424)IEEGLR LHNQQALS(-4.46)S(0)S(0)IEEGLR 0 0 1 0 B4DVB5;Q06587;A0A024RCR9;B4DW57 B4DVB5 B4DVB5 RING1 E3 ubiquitin-protein ligase RING1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 624.3035 3 621.298312 1860.87311 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.945 1 90.945 90.445 91.445 -7.6294E-06 0 0 0 0.00044513 1 50137 50.957 39.902 3 3526 665 1804 1996 5762 5762 1109;1110 LHNTIVEINNHK 12 1 0 Unmodified _LHNTIVEINNHK_ 0 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 480.601 3 477.92828 1430.76301 87511.48 0.35113 0.00016781 0.18534 8.8578E-05 0.53647 0.00025639 477.928304967313 480.599721324007 109.51 0.92398 109.51 108.73 109.66 -7.6294E-06 332 72 7 0 0 0 0.00060903 2 64103 75.739 69.506 1 0.88683 1.101 0 104120000 52854000 51265000 3527 1220 1805 1997 5763;5764 5764 LHSFESHK 8 1 0 Unmodified _LHSFESHK_ 0 0 0 0 H0YEU5;B4DRT0;H0YCT5;H0YF10;H0YDK2;Q09028 H0YEU5 H0YEU5 RBBP4 Histone-binding protein RBBP4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 492.7487 2 492.748516 983.482479 90115.38 0.35284 0.00017386 0.098233 4.8404E-05 0.45108 0.00022227 492.74858216653 496.755481009756 86.741 0.4316 86.741 86.553 86.984 7.6294E-06 100 40 4 0 0 0 0.021299 1 47114 81.191 69.822 1 0.74563 0.89777 0 16257000 9593200 6663900 3528 655 1806 1998 5765 5765 LHSFESHK 8 1 0 Unmodified _LHSFESHK_ 0 0 0 0 H0YEU5;B4DRT0;H0YCT5;H0YF10;H0YDK2;Q09028 H0YEU5 H0YEU5 RBBP4 Histone-binding protein RBBP4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 328.8347 3 328.83477 983.482479 107889.8 -0.32213 -0.00010593 0.21608 7.1055E-05 -0.10605 -3.4874E-05 328.834890745667 331.506122025065 88.72 0.53168 88.72 88.593 89.124 0 102 46 4 0 0 0 0.03332 1 48686 24.944 24.944 1 0.71271 0.86201 0 17102000 12222000 4879400 3529 655 1806 1998 5766 5766 LHSFESHK 8 1 0 Unmodified _LHSFESHK_ 0 0 0 0 H0YEU5;B4DRT0;H0YCT5;H0YF10;H0YDK2;Q09028 H0YEU5 H0YEU5 RBBP4 Histone-binding protein RBBP4 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 492.7487 2 492.748516 983.482479 NaN NaN NaN 0.51018 0.00025139 NaN NaN NaN NaN 87.497 0.52597 87.497 87.392 87.918 -7.6294E-06 0 0 0 0.0016478 1 47664 78.77 28.731 1 NaN NaN 0 9594100 9594100 0 3530 655 1806 1998 5767 5767 LHSFESHK 8 1 0 Unmodified _LHSFESHK_ 0 0 0 0 H0YEU5;B4DRT0;H0YCT5;H0YF10;H0YDK2;Q09028 H0YEU5 H0YEU5 RBBP4 Histone-binding protein RBBP4 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 492.7477 2 492.748516 983.482479 NaN NaN NaN 0.48232 0.00023766 NaN NaN NaN NaN 89.284 0.18354 89.284 89.193 89.376 0 0 0 0 0.022323 1 48859 53.351 22.633 1 NaN NaN 0 5303500 5303500 0 3531 655 1806 1998 5768 5768 LHSFESHK 8 1 0 Unmodified _LHSFESHK_ 0 0 0 0 H0YEU5;B4DRT0;H0YCT5;H0YF10;H0YDK2;Q09028 H0YEU5 H0YEU5 RBBP4 Histone-binding protein RBBP4 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 492.7491 2 492.748516 983.482479 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.705 1 84.705 84.205 85.205 7.6294E-06 0 0 0 0.026525 1 45639 46.813 5.5107 1 3532 655 1806 1998 5769 5769 LHSFESHK 8 1 0 Unmodified _LHSFESHK_ 0 0 0 0 H0YEU5;B4DRT0;H0YCT5;H0YF10;H0YDK2;Q09028 H0YEU5 H0YEU5 RBBP4 Histone-binding protein RBBP4 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 492.75 2 492.748516 983.482479 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.459 1 88.459 87.959 88.959 0 0 0 0 0.014079 1 48287 75.854 25.815 1 3533 655 1806 1998 5770 5770 LHSFESHK 8 1 0 Unmodified _LHSFESHK_ 0 0 0 0 H0YEU5;B4DRT0;H0YCT5;H0YF10;H0YDK2;Q09028 H0YEU5 H0YEU5 RBBP4 Histone-binding protein RBBP4 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 492.7493 2 492.748516 983.482479 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.986 1 90.986 90.486 91.486 0 0 0 0 0.019042 1 50167 56.721 17.699 1 3534 655 1806 1998 5771 5771 LHTFESHK 8 1 0 Unmodified _LHTFESHK_ 0 0 0 0 E9PC52;Q6FHQ0;Q16576;A8K6A2;Q5JP02 E9PC52 E9PC52 RBBP7 Histone-binding protein RBBP7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 499.7565 2 499.756341 997.498129 85510.8 1.0965 0.00054797 0.44328 0.00022153 1.5398 0.0007695 499.756490246274 503.763648529053 91.533 0.84545 91.533 90.82 91.665 7.6294E-06 140 72 4 0 0 0 0.021327 1 50653 89.55 28.589 1 1.2443 1.5689 0 30110000 14035000 16075000 3535 798 1807 1999 5772 5772 LHTFESHK 8 1 0 Unmodified _LHTFESHK_ 0 0 0 0 E9PC52;Q6FHQ0;Q16576;A8K6A2;Q5JP02 E9PC52 E9PC52 RBBP7 Histone-binding protein RBBP7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 503.7631 2 499.756341 997.498129 85708.63 0.21324 0.00010657 -0.1564 -7.8161E-05 0.056843 2.8407E-05 499.756182363388 503.763365910678 91.976 0.74712 91.976 91.611 92.359 0 196 58 5 0 0 0 0.020648 1 50735 78.728 41.634 1 1.1818 1.4897 0 49502000 19708000 29794000 3536 798 1807 1999 5773 5773 LHTFESHK 8 1 0 Unmodified _LHTFESHK_ 0 0 0 0 E9PC52;Q6FHQ0;Q16576;A8K6A2;Q5JP02 E9PC52 E9PC52 RBBP7 Histone-binding protein RBBP7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 333.5067 3 333.506653 997.498129 104481.6 0.10223 3.4093E-05 0.45768 0.00015264 0.55991 0.00018673 333.506726121031 336.178167400074 92.663 1.9548 92.663 92.279 94.234 0 471 166 4 0 0 0 0.026817 1 51288 34.186 19.512 1 1.1055 1.3787 0 70848000 34758000 36090000 3537 798 1807 1999 5774 5774 LHTFESHK 8 1 0 Unmodified _LHTFESHK_ 0 0 0 0 E9PC52;Q6FHQ0;Q16576;A8K6A2;Q5JP02 E9PC52 E9PC52 RBBP7 Histone-binding protein RBBP7 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 499.7576 2 499.756341 997.498129 NaN NaN NaN 0.73684 0.00036824 NaN NaN NaN NaN 90.937 0.95886 90.937 90.306 91.265 -7.6294E-06 0 0 0 5.3574E-06 3 50317 89.046 38.08 1 NaN NaN 0 9495200 9495200 0 3538 798 1807 1999 5775;5776;5777 5777 LHTFESHK 8 1 0 Unmodified _LHTFESHK_ 0 0 0 0 E9PC52;Q6FHQ0;Q16576;A8K6A2;Q5JP02 E9PC52 E9PC52 RBBP7 Histone-binding protein RBBP7 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 503.7634 2 499.756341 997.498129 NaN NaN NaN -0.025815 -1.2901E-05 NaN NaN NaN NaN 92.681 0.70027 92.681 92.279 92.98 0 0 0 0 0.017061 1 51320 62.659 12.619 1 NaN NaN 0 30327000 0 30327000 3539 798 1807 1999 5778 5778 LHTFESHK 8 1 0 Unmodified _LHTFESHK_ 0 0 0 0 E9PC52;Q6FHQ0;Q16576;A8K6A2;Q5JP02 E9PC52 E9PC52 RBBP7 Histone-binding protein RBBP7 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 499.7568 2 499.756341 997.498129 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.014 1 90.014 89.514 90.514 0 0 0 0 0.024474 1 49444 48.561 12.376 1 3540 798 1807 1999 5779 5779 LHTFESHK 8 1 0 Unmodified _LHTFESHK_ 0 0 0 0 E9PC52;Q6FHQ0;Q16576;A8K6A2;Q5JP02 E9PC52 E9PC52 RBBP7 Histone-binding protein RBBP7 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 499.7571 2 499.756341 997.498129 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.388 1 92.388 91.888 92.888 -7.6294E-06 0 0 0 4.2255E-06 1 51243 101.64 55.273 1 3541 798 1807 1999 5780 5780 LHTFESHK 8 1 0 Unmodified _LHTFESHK_ 0 0 0 0 E9PC52;Q6FHQ0;Q16576;A8K6A2;Q5JP02 E9PC52 E9PC52 RBBP7 Histone-binding protein RBBP7 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 499.7565 2 499.756341 997.498129 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.941 1 92.941 92.441 93.441 0 0 0 0 0.019241 1 51670 57.281 8.7773 1 3542 798 1807 1999 5781 5781 LHTFESHK 8 1 0 Unmodified _LHTFESHK_ 0 0 0 0 E9PC52;Q6FHQ0;Q16576;A8K6A2;Q5JP02 E9PC52 E9PC52 RBBP7 Histone-binding protein RBBP7 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 499.7563 2 499.756341 997.498129 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.155 1 93.155 92.655 93.655 0 0 0 0 0.0020496 1 51842 87.435 36.469 1 3543 798 1807 1999 5782 5782 LHTFESHK 8 1 0 Unmodified _LHTFESHK_ 0 0 0 0 E9PC52;Q6FHQ0;Q16576;A8K6A2;Q5JP02 E9PC52 E9PC52 RBBP7 Histone-binding protein RBBP7 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 503.7635 2 499.756341 997.498129 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.793 1 93.793 93.293 94.293 0 0 0 0 0.019822 1 52362 58.917 10.414 1 3544 798 1807 1999 5783 5783 LHTFESHK 8 1 0 Unmodified _LHTFESHK_ 0 0 0 0 E9PC52;Q6FHQ0;Q16576;A8K6A2;Q5JP02 E9PC52 E9PC52 RBBP7 Histone-binding protein RBBP7 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 503.7638 2 499.756341 997.498129 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.064 1 94.064 93.564 94.564 -7.6294E-06 0 0 0 0.022864 1 52579 49.933 12.912 1 3545 798 1807 1999 5784 5784 LHTLEEEK 8 1 0 Unmodified _LHTLEEEK_ 0 0 0 0 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 499.7611 2 499.761289 997.508025 86786.29 0.26063 0.00013025 1.0864 0.00054295 1.347 0.0006732 499.761612172496 503.768076464064 73.54 0.43094 73.54 73.285 73.716 0 84 36 4 0 0 0 0.017585 1 37499 90.37 60.145 1 0.81255 0.9788 0 16403000 7685800 8717300 3546 514 1808 2000 5785 5785 LHVDPENFR 9 0 1 Unmodified _LHVDPENFR_ 0 0 0 0 Q5XTR9;Q3Y9I8;Q4TZM4;Q9BWU5;Q8IZI0;Q8IUL9;Q6V0K9;Q6J1Z7;Q670S4;Q52MT0;Q4TWB7;Q4JLR8;Q4F786;Q3LR79;Q0Z944;E9NGZ5;D1MGQ0;B3VL05;B2M1S8;B2M1S6;A1YZ08;A0A1B4WRL5;Q9BWV6;Q9GZL9;Q9UK54;B3VL86;E9PFT6;D9YZU5;C8C504;A0N071;Q14473;CON__Q3SX09;P68871;P02042 Q5XTR9 Q5XTR9 HBD/HBB;HBB;HBD Hemoglobin subunit beta;LVV-hemorphin-7;Spinorphin;Hemoglobin subunit delta ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 563.79 2 563.78563 1125.55671 NaN NaN NaN 2.8548 0.0016095 NaN NaN NaN NaN 100.77 1.1406 100.77 99.896 101.04 0 0 0 0 0.0086649 1 57286 72.485 13.332 1 NaN NaN 0 182050000 182050000 0 + 3547 388 1809 2001 5786 5786 LHVGNISPTCTNK 13 1 0 Phospho (STY) _LHVGNIS(ph)PTCTNK_ LHVGNIS(0.883)PT(0.11)CT(0.006)NK LHVGNIS(9.03)PT(-9.03)CT(-21.46)NK 0 0 1 0 D6R9K7;J3QRR5;E9PB51;Q9BWF3 D6R9K7 D6R9K7 RBM4 RNA-binding protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 764.8574 2 760.84999 1519.68543 70283.64 0.57047 0.00043404 -0.12642 -9.6183E-05 0.44405 0.00033786 760.849809245875 764.857132768175 73.5 1.1778 73.5 72.896 74.074 0 370 102 6 0 0 0 9.8437E-26 2 37392 141.34 88.707 3 1.7447 2.1809 0 65336000 22554000 42782000 3548 771 1810 2002 5787;5788 5787 1299 LHVGNISPTCTNK 13 1 0 Phospho (STY) _LHVGNIS(ph)PTCTNK_ LHVGNIS(0.843)PT(0.106)CT(0.05)NK LHVGNIS(8.99)PT(-8.99)CT(-12.26)NK 0 0 1 0 D6R9K7;J3QRR5;E9PB51;Q9BWF3 D6R9K7 D6R9K7 RBM4 RNA-binding protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 510.2402 3 507.569086 1519.68543 85881.03 0.075899 3.8524E-05 0.088678 4.501E-05 0.16458 8.3534E-05 507.568969061516 510.24051030611 73.619 0.82457 73.619 73.138 73.963 0 235 70 6 0 0 0 0.0024973 1 37395 50.376 31.09 3 1.9301 2.449 0 38283000 16200000 22083000 3549 771 1810 2002 5789 5789 1299 LHVGNISPTCTNK 13 1 0 Phospho (STY) _LHVGNIS(ph)PTCTNK_ LHVGNIS(0.927)PT(0.052)CT(0.021)NK LHVGNIS(12.47)PT(-12.47)CT(-16.52)NK 0 0 1 0 D6R9K7;J3QRR5;E9PB51;Q9BWF3 D6R9K7 D6R9K7 RBM4 RNA-binding protein 4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 764.8582 2 760.84999 1519.68543 68326.02 1.0966 0.00083433 1.0449 0.00079501 2.1415 0.0016293 760.850832129846 764.857918493157 55.323 1.9541 55.323 54.282 56.236 3.8147E-06 894 169 7 0 0 0 0.00026887 2 33914 80.746 52.419 3 1.1756 0.77332 0 56967000 24520000 32447000 3550 771 1810 2002 5790;5791 5790 1299 LHYCVSCAIHSK 12 1 0 Unmodified _LHYCVSCAIHSK_ 0 0 0 0 A0A024RB14;P62854;Q5JNZ5;Q76N56 A0A024RB14 A0A024RB14 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 492.5707 3 492.235839 1473.68569 87718.09 0.49973 0.00024599 -0.4736 -0.00023312 0.026131 1.2863E-05 492.235598511809 494.907131796886 108.08 0.86098 108.08 107.69 108.55 0 195 64 7 0 0 0 0.00074704 2 63049 73.435 67.531 1 0.58649 0.74387 0 36556000 25074000 11482000 3551 189 1811 2003 5792;5793 5792 LHYCVSCAIHSK 12 1 0 Unmodified _LHYCVSCAIHSK_ 0 0 0 0 A0A024RB14;P62854;Q5JNZ5;Q76N56 A0A024RB14 A0A024RB14 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 492.2361 3 492.235839 1473.68569 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.05 1 111.05 110.55 111.55 0 0 0 0 0.0040056 1 65656 54.023 37.645 1 3552 189 1811 2003 5794 5794 LHYCVSCAIHSK 12 1 0 Unmodified _LHYCVSCAIHSK_ 0 0 0 0 A0A024RB14;P62854;Q5JNZ5;Q76N56 A0A024RB14 A0A024RB14 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 492.2368 3 492.235839 1473.68569 89272.57 0.2881 0.00014181 -0.091919 -4.5246E-05 0.19618 9.6568E-05 492.570261870195 494.907050572403 110.37 0.45148 110.37 110.02 110.48 0 61 40 5 0 0 0 0.024577 1 65008 40.377 40.377 1 0.463 0.55504 0 14518000 9068500 5449300 3553 189 1811 2003 5795 5795 LIEDEFIIDESDQSFASR 18 0 1 Phospho (STY) _LIEDEFIIDES(ph)DQSFASR_ LIEDEFIIDES(0.889)DQS(0.096)FAS(0.015)R LIEDEFIIDES(9.69)DQS(-9.69)FAS(-17.69)R 0 0 1 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1097.4844 2 1097.48301 2192.95147 NaN NaN NaN -0.019507 -2.1408E-05 NaN NaN NaN NaN 121.72 1.3925 121.72 121.18 122.57 -7.6294E-06 0 0 0 7.9678E-31 2 73266 117.26 89.289 3 NaN NaN 0 58739000 58739000 0 3554 1035 1812 2004 5796;5797 5796 1916 LIEDEFIIDESDQSFASR 18 0 1 Phospho (STY) _LIEDEFIIDES(ph)DQSFASR_ LIEDEFIIDES(0.564)DQS(0.168)FAS(0.268)R LIEDEFIIDES(3.23)DQS(-5.26)FAS(-3.23)R 0 0 1 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1102.9902 2 1097.48301 2192.95147 57057.22 0.63483 0.00069672 0.59184 0.00064953 1.2267 0.0013463 1097.98481798458 1102.98892385011 130.67 1.1763 130.67 130.09 131.27 0 755 113 10 0 0 0 0.00016618 2 84568 45.608 41.06 3 1.4838 0.99 0 144490000 59838000 84657000 3555 1035 1812 2004 5798;5799 5799 1916 LIEVDDER 8 0 1 Unmodified _LIEVDDER_ 0 0 0 0 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 499.7548 2 494.750921 987.48729 NaN NaN NaN -0.3002 -0.00014853 NaN NaN NaN NaN 42.013 0.71856 42.013 41.697 42.416 3.8147E-06 0 0 0 0.0096913 1 24553 70.919 26.472 1 NaN NaN 0 4839300 0 4839300 3556 405 1813 2005 5800 5800 LIEVDDER 8 0 1 Unmodified _LIEVDDER_ 0 0 0 0 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 494.751 2 494.750921 987.48729 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.835 1 41.835 41.335 42.335 0 0 0 0 0.018561 1 24497 55.37 17.132 1 3557 405 1813 2005 5801 5801 LIEVDDER 8 0 1 Unmodified _LIEVDDER_ 0 0 0 0 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 494.7507 2 494.750921 987.48729 NaN NaN NaN NaN NaN NaN NaN NaN NaN 41.909 1 41.909 41.409 42.409 -3.8147E-06 0 0 0 0.021374 1 24541 63.565 31.095 1 3558 405 1813 2005 5802 5802 LIEVDDERK 9 1 1 Unmodified _LIEVDDERK_ 0 0 0 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 558.7989 2 558.798403 1115.58225 79896.44 0.54553 0.00030484 -0.085616 -4.7842E-05 0.45991 0.000257 558.798347971911 567.809535006066 72.747 1.1523 72.747 72.263 73.416 0 514 95 7 0 0 0 0.00023932 3 37003 92.439 68.284 1 0.80509 0.97334 0 259170000 142640000 116520000 3559 405 1814 2006 5803;5804;5805 5804 LIEVDDERK 9 1 1 Unmodified _LIEVDDERK_ 0 0 0 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 372.8679 3 372.868027 1115.58225 96819.22 -0.093018 -3.4683E-05 0.19069 7.1102E-05 0.097672 3.6419E-05 372.86817801664 378.875485878709 72.75 1.9643 72.75 71.66 73.624 0 817 166 9 0 0 0 0.011185 2 36673 33.961 14.199 1 0.80713 0.99377 0 1053700000 596050000 457620000 3560 405 1814 2006 5806;5807 5807 LIEVDDERK 9 1 1 Unmodified _LIEVDDERK_ 0 0 0 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 372.868 3 372.868027 1115.58225 96884.77 0.21187 7.8999E-05 0.2912 0.00010858 0.50307 0.00018758 372.868087245706 378.875627961304 26.798 0.38868 26.798 26.643 27.032 0 107 20 9 0 0 0 1.5329E-05 2 12836 95.358 66.4 1 1.3894 1.0732 0 145560000 61883000 83674000 3561 405 1814 2006 5808;5809 5808 LIEVDDERK 9 1 1 Unmodified _LIEVDDERK_ 0 0 0 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 567.8104 2 558.798403 1115.58225 79315.69 0.62197 0.00034756 0.45811 0.00025599 1.0801 0.00060355 558.798503171549 567.809852393146 26.802 0.32311 26.802 26.643 26.966 0 95 16 8 0 0 0 0.00016995 2 12866 96.668 63.856 1 1.3361 1.0311 0 85026000 36538000 48487000 3562 405 1814 2006 5810;5811 5810 LIFSNSK 7 1 0 Phospho (STY) _LIFS(ph)NSK_ LIFS(0.944)NS(0.056)K LIFS(12.31)NS(-12.31)K 0 0 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 448.7222 2 444.714969 887.415384 90331.85 0.11671 5.1904E-05 0.021934 9.7544E-06 0.13865 6.1658E-05 444.71494775525 448.72203744286 78.646 1.9123 78.646 77.66 79.573 0 578 171 5 0 0 0 0.024161 1 41058 66.273 10.401 2 0.60981 0.75628 0 118420000 70996000 47429000 3563 1167 1815 2007 5812 5812 2269 LILSPDMQAR 10 0 1 Oxidation (M),Phospho (STY) _LILS(ph)PDM(ox)QAR_ LILSPDM(1)QAR LILS(1)PDMQAR LILSPDM(44.56)QAR LILS(44.56)PDMQAR 0 1 1 0 A0A0A0MS59;Q6ZRS2;B3KN63;A0A087X0E3;G1UI29 A0A0A0MS59 A0A0A0MS59 SRCAP Helicase SRCAP MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 625.2985 2 620.293788 1238.57302 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.015 1 81.015 80.515 81.515 0 0 0 0 0.011096 1 43032 44.564 16.882 1 3564 292 1816 2008 5813 5813 71 467 LIPGPLSPVAR 11 0 1 Phospho (STY) _LIPGPLS(ph)PVAR_ LIPGPLS(1)PVAR LIPGPLS(62.92)PVAR 0 0 1 0 P48634;B4DLY2 P48634 P48634 PRRC2A Protein PRRC2A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 605.3351 2 600.331031 1198.64751 79253.9 0.85323 0.00051222 -0.20136 -0.00012089 0.65187 0.00039134 600.330769273156 605.33512571342 108.82 0.70464 108.82 108.47 109.18 0 207 56 5 0 0 0 0.007322 3 63745 62.924 40.094 1 1.6267 1.9592 0 18533000 7207900 11325000 3565 997 1817 2009 5814;5815;5816 5815 1803 LIPGPLSPVAR 11 0 1 Phospho (STY) _LIPGPLS(ph)PVAR_ LIPGPLS(1)PVAR LIPGPLS(47.71)PVAR 0 0 1 0 P48634;B4DLY2 P48634 P48634 PRRC2A Protein PRRC2A ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 605.8378 2 600.331031 1198.64751 NaN NaN NaN -0.39923 -0.00023967 NaN NaN NaN NaN 114.6 0.881 114.6 114.2 115.08 7.6294E-06 0 0 0 0.014515 1 74058 47.712 22.858 1 NaN NaN 0 7228300 0 7228300 3566 997 1817 2009 5817 5817 1803 LIPITGGNARSPEDQLGK 18 1 1 Phospho (STY) _LIPIT(ph)GGNARSPEDQLGK_ LIPIT(0.5)GGNARS(0.5)PEDQLGK LIPIT(0)GGNARS(0)PEDQLGK 0 0 1 1 Q9UK61;A0A024R363 Q9UK61 Q9UK61 FAM208A;C3orf63 Protein FAM208A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 973.4922 2 973.490779 1944.96701 63545.79 1.0588 0.0010308 -0.27335 -0.0002661 0.78548 0.00076465 973.490435821181 982.501826036818 93.099 0.32609 93.099 92.927 93.253 0 56 26 4 0 0 0 0.00066364 1 51683 42.813 18.827 2 0.9765 1.1313 0 27985000 12658000 15327000 3567 1234 1818 2010 5818 5818 2521;3000 LIPITGGNARSPEDQLGK 18 1 1 Phospho (STY) _LIPITGGNARS(ph)PEDQLGK_ LIPIT(0.231)GGNARS(0.769)PEDQLGK LIPIT(-5.22)GGNARS(5.22)PEDQLGK 0 0 1 1 Q9UK61;A0A024R363 Q9UK61 Q9UK61 FAM208A;C3orf63 Protein FAM208A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 649.3324 3 649.329612 1944.96701 75299.03 1.2664 0.00082234 0.24993 0.00016229 1.5164 0.00098462 649.664158776616 655.671544696822 93.388 1.0592 93.388 92.801 93.86 7.6294E-06 440 87 7 0 0 0 1.2611E-05 1 52241 52.541 35.875 2 1.137 1.3544 0 83173000 37995000 45178000 3568 1234 1818 2010 5819 5819 2521;3000 LIQESPTVELK 11 1 0 Phospho (STY) _LIQES(ph)PTVELK_ LIQES(0.793)PT(0.207)VELK LIQES(5.83)PT(-5.83)VELK 0 0 1 0 H0YFT8;A0A024R3B1;F5GYW0;A0A024R3D1;A0A024R3A1;Q86XR8 H0YFT8 H0YFT8 CEP57 Centrosomal protein of 57 kDa ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 672.8491 2 668.841626 1335.6687 NaN NaN NaN -0.07605 -5.0866E-05 NaN NaN NaN NaN 89.296 0.74117 89.296 88.924 89.665 0 0 0 0 0.021974 1 57456 42.976 16.19 2 NaN NaN 0 2824200 0 2824200 3569 74 1819 2011 5820 5820 94 LISEMHSFIQIK 12 1 0 Oxidation (M),Phospho (STY) _LISEM(ox)HS(ph)FIQIK_ LISEM(1)HSFIQIK LIS(0.012)EMHS(0.988)FIQIK LISEM(59.25)HSFIQIK LIS(-19.24)EMHS(19.24)FIQIK 0 1 1 0 D3DUZ3;Q16666 D3DUZ3 D3DUZ3 IFI16 Gamma-interferon-inducible protein 16 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 775.3854 2 771.37531 1540.73607 68191.59 1.1422 0.00088106 3.4689 0.0026758 4.6111 0.0035569 771.377757096026 775.385295788216 134.59 0.39638 134.59 134.34 134.74 0 95 20 9 0 0 0 0.0064293 1 86863 59.245 21.159 2 1.544 1.0405 0 26403000 10845000 15558000 3570 768 1820 2012 5821 5821 208 1295 LISKSNPTPK 10 2 0 Phospho (STY) _LIS(ph)KSNPTPK_ LIS(0.915)KS(0.042)NPT(0.042)PK LIS(13.36)KS(-13.36)NPT(-13.36)PK 0 0 1 1 Q6ZU65 Q6ZU65 Q6ZU65 UBN2 Ubinuclein-2 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 582.8055 2 582.804846 1163.59514 NaN NaN NaN NaN NaN NaN NaN NaN NaN 43.952 1 43.952 43.452 44.452 0 0 0 0 0.010656 1 25964 45.879 11.158 3 3571 1128 1821 2013 5822 5822 2150 LISPLASPADGVK 13 1 0 Phospho (STY) _LISPLAS(ph)PADGVK_ LISPLAS(1)PADGVK LIS(-68.65)PLAS(68.65)PADGVK 0 0 1 0 Q8WYP5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 678.3575 2 674.349618 1346.68468 74459.49 1.3164 0.00088769 -0.15141 -0.0001021 1.165 0.00078559 674.349890386522 678.356386014128 101.34 1.1105 101.34 100.89 102 7.6294E-06 397 92 5 0 0 0 7.1849E-10 2 58127 103.85 80.936 2 1.0767 1.3503 0 58185000 28487000 29697000 3572 1170 1822 2014 5823;5824 5823 2290;2291 LISPLASPADGVK 13 1 0 Phospho (STY) _LIS(ph)PLASPADGVK_ LIS(1)PLASPADGVK LIS(50.02)PLAS(-50.02)PADGVK 0 0 1 0 Q8WYP5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 674.351 2 674.349618 1346.68468 73917.21 0.95196 0.00064196 0.084817 5.7196E-05 1.0368 0.00069915 674.349752806804 678.3567613815 105.29 1.2297 105.29 104.6 105.83 0 468 83 9 0 0 0 0.00039471 3 60752 78.814 58.661 2 1.4985 1.8576 0 125510000 52360000 73153000 3573 1170 1822 2014 5825;5826;5827 5825 2290;2291 LISPLASPADGVK 13 1 0 Phospho (STY) _LISPLAS(ph)PADGVK_ LISPLAS(1)PADGVK LIS(-59.05)PLAS(59.05)PADGVK 0 0 1 0 Q8WYP5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 678.3574 2 674.349618 1346.68468 74533.04 1.0874 0.0007333 -0.012845 -8.662E-06 1.0746 0.00072464 674.349559915639 678.356650952137 106.07 1.5247 106.07 105.35 106.88 7.6294E-06 740 145 7 0 0 0 2.5356E-10 4 68417 107.99 72.342 2 1.7703 1.1557 0 45304000 16958000 28346000 3574 1170 1822 2014 5828;5829;5830;5831 5830 2290;2291 LISPLASPADGVK 13 1 0 Phospho (STY) _LIS(ph)PLASPADGVK_ LIS(1)PLASPADGVK LIS(57.16)PLAS(-57.16)PADGVK 0 0 1 0 Q8WYP5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 674.3505 2 674.349618 1346.68468 74412.83 1.1582 0.00078105 0.53254 0.00035912 1.6908 0.0011402 674.350407315019 678.357944351672 111.07 1.7561 111.07 110.22 111.98 0 943 167 10 0 0 0 3.1354E-07 2 71567 99.941 68.756 2 2.4091 1.6099 0 186530000 51847000 134680000 3575 1170 1822 2014 5832;5833 5833 2290;2291 LISPLASPADGVK 13 1 0 Phospho (STY) _LIS(ph)PLASPADGVK_ LIS(1)PLASPADGVK LIS(33.52)PLAS(-33.52)PADGVK 0 0 1 0 Q8WYP5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 678.3576 2 674.349618 1346.68468 NaN NaN NaN 0.077022 5.194E-05 NaN NaN NaN NaN 107.32 1.0431 107.32 106.88 107.92 7.6294E-06 0 0 0 0.0010045 1 68935 72.681 35 2 NaN NaN 0 6687200 0 6687200 3576 1170 1822 2014 5834 5834 2290;2291 LISPLASPADGVK 13 1 0 2 Phospho (STY) _LIS(ph)PLAS(ph)PADGVK_ LIS(1)PLAS(1)PADGVK LIS(139.58)PLAS(139.58)PADGVK 0 0 2 0 Q8WYP5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 718.3404 2 714.332783 1426.65101 69068.32 0.92256 0.00065901 0.19657 0.00014042 1.1191 0.00079943 714.333050531054 718.339784083623 108.35 0.93236 108.35 107.96 108.89 7.6294E-06 319 73 7 0 0 0 9.3954E-26 1 63388 139.58 106.52 1 1.1341 1.4157 0 68373000 25071000 43303000 3577 1170 1822 2015 5835 5835 2290;2291 LISPLASPADGVK 13 1 0 2 Phospho (STY) _LIS(ph)PLAS(ph)PADGVK_ LIS(1)PLAS(1)PADGVK LIS(147.56)PLAS(147.56)PADGVK 0 0 2 0 Q8WYP5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 718.3403 2 714.332783 1426.65101 72114.34 0.70845 0.00050607 -0.08718 -6.2275E-05 0.62127 0.00044379 714.333039709274 718.339718781299 110.16 1.8636 110.16 109.57 111.43 0 1185 156 13 0 0 0 3.278E-27 5 65172 147.56 108.14 1 1.0241 1.2605 0 2863200000 1396300000 1466900000 3578 1170 1822 2015 5836;5837;5838;5839;5840 5839 2290;2291 LISPLASPADGVK 13 1 0 2 Phospho (STY) _LIS(ph)PLAS(ph)PADGVK_ LIS(1)PLAS(1)PADGVK LIS(91.81)PLAS(91.81)PADGVK 0 0 2 0 Q8WYP5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 718.3353 2 714.332783 1426.65101 72863.19 0.63378 0.00045273 0.15011 0.00010723 0.78389 0.00055996 714.332603230804 718.340250124368 111.61 0.44362 111.61 111.4 111.84 -7.6294E-06 91 36 4 0 0 0 2.3293E-06 1 66148 91.812 72.541 1 1.1801 1.4106 0 13442000 7109300 6333000 3579 1170 1822 2015 5841 5841 2290;2291 LISPLASPADGVK 13 1 0 2 Phospho (STY) _LIS(ph)PLAS(ph)PADGVK_ LIS(1)PLAS(1)PADGVK LIS(112.96)PLAS(112.96)PADGVK 0 0 2 0 Q8WYP5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 714.3336 2 714.332783 1426.65101 NaN NaN NaN -0.081051 -5.7897E-05 NaN NaN NaN NaN 106.02 0.89371 106.02 105.61 106.5 0 0 0 0 5.3577E-17 1 61490 112.96 80.71 1 NaN NaN 0 23113000 23113000 0 3580 1170 1822 2015 5842 5842 2290;2291 LISPLASPADGVK 13 1 0 2 Phospho (STY) _LIS(ph)PLAS(ph)PADGVK_ LIS(1)PLAS(1)PADGVK LIS(108.71)PLAS(108.71)PADGVK 0 0 2 0 Q8WYP5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 718.3403 2 714.332783 1426.65101 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.28 1 111.28 110.78 111.78 0 0 0 0 0.0010886 1 65829 108.71 56.02 1 3581 1170 1822 2015 5843 5843 2290;2291 LISPLASPADGVK 13 1 0 2 Phospho (STY) _LIS(ph)PLAS(ph)PADGVK_ LIS(1)PLAS(1)PADGVK LIS(52.27)PLAS(52.27)PADGVK 0 0 2 0 Q8WYP5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 718.3379 2 714.332783 1426.65101 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.2 1 112.2 111.7 112.7 7.6294E-06 0 0 0 0.0014182 1 66527 52.265 30.965 1 3582 1170 1822 2015 5844 5844 2290;2291 LISPLASPADGVK 13 1 0 2 Phospho (STY) _LIS(ph)PLAS(ph)PADGVK_ LIS(1)PLAS(1)PADGVK LIS(58.83)PLAS(58.83)PADGVK 0 0 2 0 Q8WYP5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 718.3415 2 714.332783 1426.65101 72280.27 1.1574 0.00082675 0.25755 0.00018398 1.4149 0.0010107 714.332761386709 718.339928060786 116.23 1.1575 116.23 115.75 116.91 -7.6294E-06 606 107 8 0 0 0 0.0035588 2 74669 58.83 44.8 1 1.8836 1.2356 0 52520000 17618000 34901000 3583 1170 1822 2015 5845;5846 5845 2290;2291 LISPLASPADGVK 13 1 0 2 Phospho (STY) _LIS(ph)PLAS(ph)PADGVK_ LIS(1)PLAS(1)PADGVK LIS(67.33)PLAS(67.33)PADGVK 0 0 2 0 Q8WYP5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 718.3407 2 714.332783 1426.65101 71063.69 1.1519 0.00082281 -0.37003 -0.00026432 0.78183 0.00055848 714.334133291456 718.340062624839 120.18 5.0676 120.18 119.46 124.53 0 2397 468 14 0 0 0 0.0021121 7 77770 67.326 49.918 1 1.8892 1.2568 0 2887600000 993830000 1893800000 3584 1170 1822 2015 5847;5848;5849;5850;5851;5852;5853 5849 2290;2291 LITPPPPPPSPER 13 0 1 2 Phospho (STY) _LIT(ph)PPPPPPS(ph)PER_ LIT(1)PPPPPPS(1)PER LIT(84.41)PPPPPPS(84.41)PER 0 0 2 0 J3QKY4;J3QR53;D2SNZ4;Q96HE9 J3QKY4 J3QKY4 PRR11 Proline-rich protein 11 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 779.3601 2 779.359332 1556.70411 69294.51 0.44226 0.00034468 0.68404 0.00053311 1.1263 0.00087779 779.359476105085 784.363619191876 92.044 1.3152 92.044 91.611 92.927 -7.6294E-06 228 115 5 0 0 0 0.00010677 2 51322 84.41 74.179 1 0.34905 0.43077 0 32770000 23618000 9152400 3585 764 1823 2016 5854;5855 5855 1289;2809 LITPPPPPPSPER 13 0 1 2 Phospho (STY) _LIT(ph)PPPPPPS(ph)PER_ LIT(1)PPPPPPS(1)PER LIT(50.3)PPPPPPS(50.3)PER 0 0 2 0 J3QKY4;J3QR53;D2SNZ4;Q96HE9 J3QKY4 J3QKY4 PRR11 Proline-rich protein 11 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 784.3647 2 779.359332 1556.70411 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.322 1 92.322 91.822 92.822 7.6294E-06 0 0 0 0.002123 1 51196 50.305 32.869 1 3586 764 1823 2016 5856 5856 1289;2809 LITPPPPPPSPER 13 0 1 Phospho (STY) _LITPPPPPPS(ph)PER_ LITPPPPPPS(1)PER LIT(-36.29)PPPPPPS(36.29)PER 0 0 1 0 J3QKY4;J3QR53;D2SNZ4;Q96HE9 J3QKY4 J3QKY4 PRR11 Proline-rich protein 11 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 739.3782 2 739.376167 1476.73778 72247.38 0.91215 0.00067442 0.52878 0.00039096 1.4409 0.0010654 739.376466774105 744.380786036204 84.295 1.2668 84.295 83.783 85.05 0 464 115 6 0 0 0 0.0060073 1 54283 47.037 38.574 2 0.72736 0.56162 0 16628000 9103600 7524800 3587 764 1823 2017 5857 5857 1289;2809 LIVENLSSR 9 0 1 Phospho (STY) _LIVENLS(ph)SR_ LIVENLS(0.5)S(0.5)R LIVENLS(0)S(0)R 0 0 1 0 V9HVZ0;A8K588;Q13247;Q59GY3;A0A0D9SEM4;Q53F45;B4DEM8;A8K644;Q08170;Q59EF5;B4DJK0;B4DUA4;A0A024R6D8;Q59EK7;Q13243 V9HVZ0;A8K644;B4DJK0 V9HVZ0 HEL-S-91;SRSF6;SRSF4;SFRS4;SRSF5;SFRS5 Serine/arginine-rich splicing factor 6;Serine/arginine-rich splicing factor 4;Serine/arginine-rich splicing factor 5 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 560.7859 2 555.781371 1109.54819 NaN NaN NaN -0.38854 -0.00021594 NaN NaN NaN NaN 81.841 0.57861 81.841 81.637 82.216 0 0 0 0 0.007874 2 52350 60.641 32.628 2 NaN NaN 0 3762000 0 3762000 3588 474;478;121 1824 2018 5858;5859 5858 176;177 LIVENLSSR 9 0 1 Phospho (STY) _LIVENLS(ph)SR_ LIVENLS(0.5)S(0.5)R LIVENLS(0)S(0)R 0 0 1 0 V9HVZ0;A8K588;Q13247;Q59GY3;A0A0D9SEM4;Q53F45;B4DEM8;A8K644;Q08170;Q59EF5;B4DJK0;B4DUA4;A0A024R6D8;Q59EK7;Q13243 V9HVZ0;A8K644;B4DJK0 V9HVZ0 HEL-S-91;SRSF6;SRSF4;SFRS4;SRSF5;SFRS5 Serine/arginine-rich splicing factor 6;Serine/arginine-rich splicing factor 4;Serine/arginine-rich splicing factor 5 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 555.7819 2 555.781371 1109.54819 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.948 1 81.948 81.448 82.448 0 0 0 0 0.0025911 1 52488 68.893 37.819 2 3589 474;478;121 1824 2018 5860 5860 176;177 LIVPSPDVLK 10 1 0 Phospho (STY) _LIVPS(ph)PDVLK_ LIVPS(1)PDVLK LIVPS(82.42)PDVLK 0 0 1 0 Q9UIF8;Q6MZK7;Q3B7K5;A0A0A0MR97 Q9UIF8 Q9UIF8 BAZ2B;DKFZp686H10114 Bromodomain adjacent to zinc finger domain protein 2B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 584.8271 2 580.819965 1159.62538 79876.52 0.86949 0.00050502 -0.26584 -0.00015441 0.60365 0.00035061 580.819788369876 584.82686982961 118.04 0.72411 118.04 117.7 118.42 0 318 63 7 0 0 0 0.00080936 2 70699 82.417 60.286 1 0.50706 0.64042 0 46707000 28835000 17872000 3590 1231 1825 2019 5861;5862 5862 2510 LKAESISEEADSEPGR 16 1 1 3 Phospho (STY) _LKAES(ph)IS(ph)EEADS(ph)EPGR_ LKAES(1)IS(1)EEADS(1)EPGR LKAES(59.28)IS(59.28)EEADS(59.28)EPGR 0 0 3 1 Q9NSI6 Q9NSI6 Q9NSI6 BRWD1 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 988.3762 2 979.365083 1956.71561 61498.17 0.40092 0.00039265 0.03359 3.2897E-05 0.43451 0.00042554 979.365130121978 988.376090718495 57.871 1.142 57.871 57.25 58.392 0 500 90 7 0 0 0 2.8948E-05 1 25278 59.281 47.761 1 0.64143 0.75921 0 50753000 30125000 20628000 3591 1218 1826 2020 5863 5863 2450;2451;2452 LKAESISEEADSEPGR 16 1 1 2 Phospho (STY) _LKAES(ph)IS(ph)EEADSEPGR_ LKAES(1)IS(0.989)EEADS(0.012)EPGR LKAES(35.38)IS(19.41)EEADS(-19.41)EPGR 0 0 2 1 Q9NSI6 Q9NSI6 Q9NSI6 BRWD1 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 948.3938 2 939.381918 1876.74928 63030.64 0.6678 0.00062732 -0.00088948 -8.3556E-07 0.66691 0.00062648 939.381760144048 948.39307375549 62.508 1.0322 62.508 61.869 62.901 0 425 77 7 0 0 0 0.00036118 1 28838 43.454 37.338 3 0.94387 1.1168 0 49507000 25632000 23875000 3592 1218 1826 2021 5864 5864 2450;2451;2452 LKAESISEEADSEPGR 16 1 1 2 Phospho (STY) _LKAES(ph)IS(ph)EEADSEPGR_ LKAES(1)IS(0.998)EEADS(0.002)EPGR LKAES(53.18)IS(27.76)EEADS(-27.76)EPGR 0 0 2 1 Q9NSI6 Q9NSI6 Q9NSI6 BRWD1 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 948.3952 2 939.381918 1876.74928 62516.72 1.0529 0.00098905 0.052179 4.9016E-05 1.1051 0.0010381 939.382084122285 948.393169204218 58.348 1.4775 58.348 57.737 59.215 0 856 134 10 0 0 0 5.6173E-05 1 35720 62.94 45.644 3 2.0749 1.6034 0 186890000 57138000 129760000 3593 1218 1826 2021 5865 5865 2450;2451;2452 LKLSPSPSSR 10 1 1 2 Phospho (STY) _LKLS(ph)PS(ph)PSSR_ LKLS(0.999)PS(0.813)PS(0.102)S(0.086)R LKLS(34.72)PS(9.04)PS(-9.04)S(-9.76)R 0 0 2 1 P20700;B4DZT3;A0A0A7M1X5;Q03252 P20700;Q03252 P20700 LMNB1;LMNB2 Lamin-B1;Lamin-B2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 616.2776 2 616.277811 1230.54107 75630.06 0.79339 0.00048895 -0.26867 -0.00016558 0.52472 0.00032337 616.277836325515 625.288692557039 60.681 1.3733 60.681 60.019 61.393 0 491 99 6 0 0 0 0.0048367 4 27965 56.951 40.32 6 0.61252 0.74968 0 667260000 420620000 246640000 3594 972;1036 1827 2022 5866;5867;5868;5869 5868 1725;1726 LKLSPSPSSR 10 1 1 2 Phospho (STY) _LKLS(ph)PS(ph)PSSR_ LKLS(0.998)PS(0.874)PS(0.058)S(0.069)R LKLS(30.44)PS(11.08)PS(-11.87)S(-11.08)R 0 0 2 1 P20700;B4DZT3;A0A0A7M1X5;Q03252 P20700;Q03252 P20700 LMNB1;LMNB2 Lamin-B1;Lamin-B2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 616.2782 2 616.277811 1230.54107 75775.68 1.0307 0.00063521 -0.023936 -1.4751E-05 1.0068 0.00062046 616.277822810484 625.289009711962 50.697 2.0966 50.697 49.882 51.979 0 1228 190 9 0 0 0 0.0042356 3 31172 61.167 42.728 6 0.77944 0.60263 0 249460000 142210000 107250000 3595 972;1036 1827 2022 5870;5871;5872 5872 1725;1726 LKLSPSPSSR 10 1 1 Phospho (STY) _LKLS(ph)PSPSSR_ LKLS(0.882)PS(0.032)PS(0.043)S(0.043)R LKLS(13.11)PS(-14.36)PS(-13.11)S(-13.11)R 0 0 1 1 P20700;B4DZT3;A0A0A7M1X5;Q03252 P20700;Q03252 P20700 LMNB1;LMNB2 Lamin-B1;Lamin-B2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 576.2944 2 576.294646 1150.57474 80630.15 0.4528 0.00026094 -0.072037 -4.1514E-05 0.38076 0.00021943 576.294705325403 585.305660197684 66.175 0.74655 66.175 65.926 66.673 0 219 54 6 0 0 0 0.013697 1 31991 44.299 32.767 4 0.81004 0.96469 0 81402000 43448000 37953000 3596 972;1036 1827 2023 5873 5873 1725;1726 LKLSPSPSSR 10 1 1 Phospho (STY) _LKLS(ph)PSPSSR_ LKLS(0.995)PS(0.003)PS(0.001)S(0.001)R LKLS(25.12)PS(-25.12)PS(-30.49)S(-30.49)R 0 0 1 1 P20700;B4DZT3;A0A0A7M1X5;Q03252 P20700;Q03252 P20700 LMNB1;LMNB2 Lamin-B1;Lamin-B2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 585.3068 2 576.294646 1150.57474 79584.63 0.65888 0.00037971 0.31304 0.0001804 0.97191 0.00056011 576.294813429828 585.305968399654 39.189 1.4522 39.189 38.88 40.332 0 586 131 8 0 0 0 0.0062757 3 22989 59.116 40.98 4 1.0001 0.77216 0 109070000 54707000 54368000 3597 972;1036 1827 2023 5874;5875;5876 5874 1725;1726 LKSEDGVEGDLGETQSR 17 1 1 Phospho (STY) _LKS(ph)EDGVEGDLGETQSR_ LKS(1)EDGVEGDLGETQSR LKS(89.9)EDGVEGDLGET(-90.86)QS(-89.9)R 0 0 1 1 Q09666;B4DTV0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 959.4318 2 950.420217 1898.82588 62574.58 0.43732 0.00041564 0.025986 2.4698E-05 0.46331 0.00044034 950.41986281459 959.431508877363 66.576 0.84098 66.576 66.206 67.047 0 329 59 8 0 0 0 1.635E-16 2 32235 105.79 94.524 3 1.3288 1.5891 0 112220000 45405000 66811000 3598 1042 1828 2024 5877;5878 5878 1941 LKSEDGVEGDLGETQSR 17 1 1 Phospho (STY) _LKS(ph)EDGVEGDLGETQSR_ LKS(1)EDGVEGDLGETQSR LKS(60.29)EDGVEGDLGET(-60.29)QS(-63.03)R 0 0 1 1 Q09666;B4DTV0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 639.9567 3 633.949237 1898.82588 76103.52 0.56865 0.0003605 -0.25156 -0.00015947 0.3171 0.00020102 633.949135597074 639.956610061767 66.589 0.68443 66.589 66.24 66.925 0 202 47 6 0 0 0 1.2005E-05 2 32332 66.889 56.074 3 1.3757 1.6289 0 52094000 22027000 30067000 3599 1042 1828 2024 5879;5880 5879 1941 LKSEDGVEGDLGETQSR 17 1 1 Phospho (STY) _LKS(ph)EDGVEGDLGETQSR_ LKS(1)EDGVEGDLGETQSR LKS(52.58)EDGVEGDLGET(-52.58)QS(-52.58)R 0 0 1 1 Q09666;B4DTV0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 959.4325 2 950.420217 1898.82588 61877.68 0.96539 0.00091753 -0.032389 -3.0783E-05 0.93301 0.00088675 950.420173077294 959.431416494896 52.001 2.096 52.001 50.814 52.91 3.8147E-06 954 190 7 0 0 0 4.7478E-05 3 30991 58.123 45.242 3 0.86515 0.66693 0 44502000 22013000 22489000 3600 1042 1828 2024 5881;5882;5883 5881 1941 LKSPVLSNTTTEPASTMSPPPAK 23 2 0 Oxidation (M),2 Phospho (STY) _LKS(ph)PVLSNTTTEPASTM(ox)S(ph)PPPAK_ LKSPVLSNTTTEPASTM(1)SPPPAK LKS(0.819)PVLS(0.067)NT(0.038)T(0.042)T(0.035)EPAS(0.052)T(0.116)MS(0.831)PPPAK LKSPVLSNTTTEPASTM(48.55)SPPPAK LKS(11.13)PVLS(-11.13)NT(-13.84)T(-13.42)T(-15.01)EPAS(-12.38)T(-9.26)MS(9.26)PPPAK 0 1 2 1 A0A075B784;A0A024R8V6;Q9P275;B3KMW2 A0A075B784 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 849.3995 3 844.056439 2529.14749 65848.9 0.59689 0.00050381 -0.17764 -0.00014994 0.41925 0.00035387 844.39071035884 849.733452211053 71.896 1.2464 71.896 71.286 72.532 0 822 109 12 0 0 0 2.7119E-07 2 36460 48.551 48.551 28 1.1897 1.5565 0 213980000 97006000 116980000 3601 157 1829 2025 5884;5885 5884 36 243;244;2648 LLADQAEAR 9 0 1 Unmodified _LLADQAEAR_ 0 0 0 0 Q8IWR8;J3QR09;J3KTE4;Q53G49;P84098 Q8IWR8 Q8IWR8 RPL19 Ribosomal protein L19;60S ribosomal protein L19 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 493.7672 2 493.766906 985.519259 NaN NaN NaN 0.22934 0.00011324 NaN NaN NaN NaN 55.907 0.88374 55.907 55.289 56.173 0 0 0 0 0.015404 1 23861 56.729 14.62 1 NaN NaN 0 5552000 5552000 0 3602 894 1830 2026 5886 5886 LLADQAEAR 9 0 1 Unmodified _LLADQAEAR_ 0 0 0 0 Q8IWR8;J3QR09;J3KTE4;Q53G49;P84098 Q8IWR8 Q8IWR8 RPL19 Ribosomal protein L19;60S ribosomal protein L19 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 498.7715 2 493.766906 985.519259 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.472 1 55.472 54.972 55.972 0 0 0 0 0.0039608 1 23763 70.919 25.201 1 3603 894 1830 2026 5887 5887 LLADQAEAR 9 0 1 Unmodified _LLADQAEAR_ 0 0 0 0 Q8IWR8;J3QR09;J3KTE4;Q53G49;P84098 Q8IWR8 Q8IWR8 RPL19 Ribosomal protein L19;60S ribosomal protein L19 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 493.7671 2 493.766906 985.519259 NaN NaN NaN -0.12176 -6.012E-05 NaN NaN NaN NaN 28.329 0.19967 28.329 28.236 28.436 0 0 0 0 0.014998 1 14153 57.59 17.486 1 NaN NaN 0 6231200 6231200 0 3604 894 1830 2026 5888 5888 LLALNSLYSPK 11 1 0 Phospho (STY) _LLALNSLYS(ph)PK_ LLALNS(0.059)LYS(0.941)PK LLALNS(-12.04)LY(-34.65)S(12.04)PK 0 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 649.8419 2 649.841429 1297.6683 NaN NaN NaN 0.07864 5.1104E-05 NaN NaN NaN NaN 118.39 0.42681 118.39 118.21 118.63 0 0 0 0 5.1004E-06 1 70955 89.629 54.405 3 NaN NaN 0 3624000 3624000 0 3605 1027 1831 2027 5889 5889 1856;1857 LLALNSLYSPK 11 1 0 Phospho (STY) _LLALNSLYS(ph)PK_ LLALNS(0.045)LY(0.01)S(0.946)PK LLALNS(-13.27)LY(-19.95)S(13.27)PK 0 0 1 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 649.842 2 649.841429 1297.6683 NaN NaN NaN 0.078352 5.0916E-05 NaN NaN NaN NaN 125.73 0.63078 125.73 125.41 126.04 -7.6294E-06 0 0 0 4.0767E-06 1 81242 90.861 58.506 3 NaN NaN 0 4940800 4940800 0 3606 1027 1831 2027 5890 5890 1856;1857 LLALNSLYSPK 11 1 0 2 Phospho (STY) _LLALNS(ph)LYS(ph)PK_ LLALNS(0.939)LY(0.151)S(0.91)PK LLALNS(11.46)LY(-9.74)S(9.74)PK 0 0 2 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 689.8253 2 689.824594 1377.63463 NaN NaN NaN -0.10401 -7.1749E-05 NaN NaN NaN NaN 128.11 0.46984 128.11 127.84 128.31 0 0 0 0 0.0023864 1 77742 63.185 38.332 3 NaN NaN 0 2653800 2653800 0 3607 1027 1831 2028 5891 5891 1856;1857 LLASANLEEVTMK 13 1 0 Oxidation (M),Phospho (STY) _LLAS(ph)ANLEEVTM(ox)K_ LLASANLEEVTM(1)K LLAS(0.995)ANLEEVT(0.005)MK LLASANLEEVTM(43.81)K LLAS(23.39)ANLEEVT(-23.39)MK 0 1 1 0 B4DFG0;P35659;H0Y993;B4DNW3 B4DFG0 B4DFG0 DEK Protein DEK MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 757.8639 2 757.862232 1513.70991 71678.57 1.104 0.00083671 -0.03655 -2.77E-05 1.0675 0.00080901 757.862732970817 761.868951688334 111.3 0.79564 111.3 110.99 111.78 0 205 77 5 0 0 0 0.0061622 1 71515 43.813 32.323 2 0.57376 0.43671 0 11392000 7928400 3463600 3608 619 1832 2029 5892 5892 159 1025 LLASPSSR 8 0 1 Phospho (STY) _LLAS(ph)PSSR_ LLAS(0.954)PS(0.023)S(0.023)R LLAS(16.15)PS(-16.15)S(-16.15)R 0 0 1 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 460.7274 2 455.723325 909.432097 89754.91 0.35579 0.00016214 -0.054286 -2.4739E-05 0.3015 0.0001374 455.723205016842 460.727321449419 48.031 1.166 48.031 47.544 48.71 0 336 79 6 0 0 0 0.018701 2 19084 52.579 14.275 3 0.77906 0.95123 0 21550000 11902000 9647900 3609 464 1833 2030 5893;5894 5894 803 LLASTLVHSVK 11 1 0 Phospho (STY) _LLASTLVHS(ph)VK_ LLAS(0.012)T(0.012)LVHS(0.976)VK LLAS(-19.17)T(-19.17)LVHS(19.17)VK 0 0 1 0 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09;E9PJA7 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 624.343 2 624.341596 1246.66864 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.137 1 93.137 92.637 93.637 -7.6294E-06 0 0 0 0.016367 1 51829 41.401 16.104 3 3610 809 1834 2031 5895 5895 1397 LLDESESAASSR 12 0 1 Phospho (STY) _LLDESES(ph)AASSR_ LLDES(0.076)ES(0.809)AAS(0.046)S(0.069)R LLDES(-10.25)ES(10.25)AAS(-12.43)S(-10.72)R 0 0 1 0 Q8N108 Q8N108 Q8N108 MIER1 Mesoderm induction early response protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 678.295 2 672.787579 1343.5606 75725.2 1.0476 0.0007048 0.16842 0.00011331 1.216 0.00081811 672.787447475901 677.791888691455 40.109 0.68602 40.109 39.793 40.479 0 268 66 6 0 0 0 0.0016241 2 23151 74.475 46.271 4 1.912 1.423 0 22204000 5690200 16514000 3611 1149 1835 2032 5896;5897 5897 2212 LLEAISSLDGK 11 1 0 Phospho (STY) _LLEAISS(ph)LDGK_ LLEAISS(1)LDGK LLEAIS(-37.07)S(37.07)LDGK 0 0 1 0 Q9BVJ6;O60531 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 613.3088 2 613.307419 1224.60028 77870.74 1.4436 0.00088535 0.28863 0.00017702 1.7322 0.0010624 613.307538938848 617.31461316971 100.59 0.66661 100.59 100.48 101.15 0 125 49 4 0 0 0 1.2687E-58 2 57736 184.31 141.6 2 0.40374 0.5096 0 47568000 33679000 13889000 3612 1199 1836 2033 5898;5899 5898 2383;2384 LLEAISSLDGK 11 1 0 Phospho (STY) _LLEAIS(ph)SLDGK_ LLEAIS(0.5)S(0.5)LDGK LLEAIS(0)S(0)LDGK 0 0 1 0 Q9BVJ6;O60531 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 613.3078 2 613.307419 1224.60028 NaN NaN NaN 0.37857 0.00023218 NaN NaN NaN NaN 99.945 0.06015 99.945 99.921 99.981 0 0 0 0 0.0051311 1 57097 62.408 24.104 2 NaN NaN 0 5304600 5304600 0 3613 1199 1836 2033 5900 5900 2383;2384 LLEAISSLDGK 11 1 0 Phospho (STY) _LLEAISS(ph)LDGK_ LLEAIS(0.304)S(0.696)LDGK LLEAIS(-3.59)S(3.59)LDGK 0 0 1 0 Q9BVJ6;O60531 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 613.3076 2 613.307419 1224.60028 78292.28 0.97678 0.00059906 -0.081297 -4.986E-05 0.89548 0.0005492 613.307337655824 617.31446674593 105.65 1.3354 105.65 105.19 106.52 0 455 123 6 0 0 0 1.8013E-10 4 68198 122.46 78.947 2 0.7019 0.49863 0 21831000 12717000 9114400 3614 1199 1836 2033 5901;5902;5903;5904 5903 2383;2384 LLEAISSLDGK 11 1 0 Phospho (STY) _LLEAIS(ph)SLDGK_ LLEAIS(0.623)S(0.377)LDGK LLEAIS(2.18)S(-2.18)LDGK 0 0 1 0 Q9BVJ6;O60531 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 613.3083 2 613.307419 1224.60028 NaN NaN NaN NaN NaN NaN NaN NaN NaN 102.95 1 102.95 102.45 103.45 0 0 0 0 0.0016409 1 66263 62.338 29.218 2 3615 1199 1836 2033 5905 5905 2383;2384 LLEEEIQAPTSSK 13 1 0 Phospho (STY) _LLEEEIQAPTSS(ph)K_ LLEEEIQAPT(0.036)S(0.242)S(0.722)K LLEEEIQAPT(-13)S(-4.76)S(4.76)K 0 0 1 0 B4DGJ5;A0A024R0H6;Q8N7H5 B4DGJ5 B4DGJ5 PAF1 RNA polymerase II-associated factor 1 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 766.8732 2 762.863286 1523.71202 70520.87 0.85895 0.00065526 -0.13777 -0.0001051 0.72118 0.00055016 762.863587825032 766.870311178362 81.58 1.2286 81.58 80.947 82.175 0 361 111 5 0 0 0 2.2753E-33 1 43119 153.85 122.32 3 4.9147 6.1157 0 77230000 13834000 63396000 3616 28 1837 2034 5906 5906 36 LLEGEDAHLSSSQFSSGSQSSR 22 0 1 Unmodified _LLEGEDAHLSSSQFSSGSQSSR_ 0 0 0 0 Q13092;A0A024R1X6;CON__P02533;P02533;CON__Q61782 Q13092 Q13092 K14;KRT14 Keratin, type I cytoskeletal 14 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 770.6949 3 770.359525 2308.05675 NaN NaN NaN -0.050595 -3.8976E-05 NaN NaN NaN NaN 69.96 1.1417 69.96 69.464 70.605 0 0 0 0 0.015262 1 44056 34.914 20.144 1 NaN NaN 0 5514600 5514600 0 + 3617 54 1838 2035 5907 5907 LLEGEDAHLSSSQFSSGSQSSR 22 0 1 Phospho (STY) _LLEGEDAHLSSSQFSSGS(ph)QSSR_ LLEGEDAHLS(0.001)S(0.001)S(0.001)QFS(0.036)S(0.095)GS(0.343)QS(0.24)S(0.282)R LLEGEDAHLS(-24.11)S(-24.11)S(-24.11)QFS(-9.83)S(-5.57)GS(0.85)QS(-1.55)S(-0.85)R 0 0 1 0 Q13092;A0A024R1X6;CON__P02533;P02533;CON__Q61782 Q13092 Q13092 K14;KRT14 Keratin, type I cytoskeletal 14 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 797.3501 3 797.014969 2388.02308 NaN NaN NaN -0.19002 -0.00015145 NaN NaN NaN NaN 76.627 1.1046 76.627 76.153 77.258 0 0 0 0 5.7877E-05 1 49133 47.507 27.068 8 NaN NaN 0 27343000 27343000 0 + 3618 54 1838 2036 5908 5908 65 LLEGEEER 8 0 1 Unmodified _LLEGEEER_ 0 0 0 0 P20700;B4DZT3;E9PBF6;A0A0A7M1X5;Q03252;P02545;W8QEH3;Q5TCI8;Q5I6Y5;Q3BDU5;Q8N519;A0A0C4DGC5;B4DFR3 P20700;Q03252;P02545 P02545 LMNB1;LMNB2;LMNA Lamin-B1;Lamin-B2;Prelamin-A/C;Lamin-A/C MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 492.7473 2 487.743096 973.47164 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.297 1 53.297 52.797 53.797 0 0 0 0 0.020448 1 22262 66.682 19.615 1 3619 954;972;1036 1839 2037 5909 5909 LLEGEESR 8 0 1 Unmodified _LLEGEESR_ 0 0 0 0 CON__P05787;P05787;Q969I0;Q7L4M3;CON__Q9H552;H7C5W5;Q96GE1;B0YJC5;CON__Q9DCV7;B3KWQ6;CON__Q9NSB2;CON__Q6ISB0;P41219;Q9NSB2;B3KY79;CON__P08729;CON__Q3KNV1;P08729;V9HWE1;Q53HU8;P08670;B3KRK8;B0YJC4;Q9H319;Q53SB5;Q45VM8;Q45VM7;Q45VM6;L7RDA5;A5Z217;P17661 CON__P05787;B3KY79;V9HWE1 CON__P05787 KRT8;PRPH;VIM;KRT84;KRT7;HEL113;tmp_locus_29;DES Keratin, type II cytoskeletal 8;Peripherin;Keratin, type II cuticular Hb4;Keratin, type II cytoskeletal 7;Vimentin;Desmin MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 466.7377 2 466.737814 931.461075 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.102 1 51.102 50.602 51.602 0 0 0 0 0.026979 1 20785 46.426 12.687 1 + 3620 754;960;613 1840 2038 5910 5910 LLELTSSYSPDVSDYK 16 1 0 Phospho (STY) _LLELTSSYS(ph)PDVSDYK_ LLELTS(0.002)S(0.012)Y(0.002)S(0.976)PDVS(0.007)DYK LLELT(-38.85)S(-26.19)S(-19.06)Y(-27.58)S(19.06)PDVS(-21.28)DY(-62.98)K 0 0 1 0 P38432 P38432 P38432 COIL Coilin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 953.4387 2 948.929355 1895.84416 62793.38 0.64057 0.00060785 -0.015609 -1.4811E-05 0.62496 0.00059304 948.92926840345 952.936932778924 111.43 0.89871 111.43 110.98 111.88 0 373 78 7 0 0 0 2.2518E-16 1 65925 107.82 88.247 7 0.6102 0.75804 0 95522000 59337000 36185000 3621 987 1841 2039 5911 5911 1749 LLELTSSYSPDVSDYK 16 1 0 Phospho (STY) _LLELTSSYS(ph)PDVSDYK_ LLELTSS(0.007)YS(0.988)PDVS(0.004)DYK LLELT(-56.92)S(-35.17)S(-21.31)Y(-33.88)S(21.31)PDVS(-23.42)DY(-62.23)K 0 0 1 0 P38432 P38432 P38432 COIL Coilin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 953.4395 2 948.929355 1895.84416 62269.75 0.96599 0.00091665 0.50557 0.00047975 1.4716 0.0013964 949.431009260214 952.936991507084 118.71 1.0761 118.71 118.23 119.31 0 655 94 10 0 0 0 3.0588E-22 2 76317 115.8 91.419 7 0.80697 0.53958 0 129400000 70176000 59222000 3622 987 1841 2039 5912;5913 5912 1749 LLGLTPPEGGAGDR 14 0 1 Phospho (STY) _LLGLT(ph)PPEGGAGDR_ LLGLT(1)PPEGGAGDR LLGLT(58.49)PPEGGAGDR 0 0 1 0 B4DGP7;V9GYY5;A0A024R1M6;Q9UGY1 B4DGP7 B4DGP7 MGC3731;NOL12 Nucleolar protein 12 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 721.8514 2 716.845231 1431.67591 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.97 1 112.97 112.47 113.47 0 0 0 0 0.00021153 1 67084 58.487 28.281 1 3623 48 1842 2040 5914 5914 2619 LLGLTPPEGGAGDR 14 0 1 Phospho (STY) _LLGLT(ph)PPEGGAGDR_ LLGLT(1)PPEGGAGDR LLGLT(55.84)PPEGGAGDR 0 0 1 0 B4DGP7;V9GYY5;A0A024R1M6;Q9UGY1 B4DGP7 B4DGP7 MGC3731;NOL12 Nucleolar protein 12 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 721.8499 2 716.845231 1431.67591 70997.34 1.1515 0.00082542 0.32132 0.00023034 1.4728 0.0010558 716.845630683264 721.849460897075 119.56 1.3438 119.56 118.85 120.19 0 369 117 5 0 0 0 0.021128 1 77360 55.841 28.159 1 1.2843 0.98819 0 17099000 7254800 9844300 3624 48 1842 2040 5915 5915 2619 LLGSTLTSEEK 11 1 0 Phospho (STY) _LLGSTLTS(ph)EEK_ LLGSTLT(0.325)S(0.675)EEK LLGS(-49.32)T(-33.49)LT(-3.17)S(3.17)EEK 0 0 1 0 Q9H9F9 Q9H9F9 Q9H9F9 ACTR5 Actin-related protein 5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 629.3031 2 629.302333 1256.59011 77886.23 0.75388 0.00047442 0.24241 0.00015255 0.99629 0.00062697 629.302398457246 633.309523368684 78.001 0.87859 78.001 77.462 78.341 0 229 77 4 0 0 0 3.0498E-26 2 40626 152.4 78.512 4 0.66307 0.8414 0 38595000 21130000 17465000 3625 1208 1843 2041 5916;5917 5917 2411 LLGSTLTSEEK 11 1 0 Phospho (STY) _LLGSTLTS(ph)EEK_ LLGST(0.003)LT(0.197)S(0.8)EEK LLGS(-42.58)T(-24.12)LT(-6.08)S(6.08)EEK 0 0 1 0 Q9H9F9 Q9H9F9 Q9H9F9 ACTR5 Actin-related protein 5 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 633.31 2 629.302333 1256.59011 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.181 1 78.181 77.681 78.681 7.6294E-06 0 0 0 0.0030447 1 40920 95.273 38.914 4 3626 1208 1843 2041 5918 5918 2411 LLGSTLTSEEK 11 1 0 Phospho (STY) _LLGSTLTS(ph)EEK_ LLGS(0.001)T(0.003)LT(0.203)S(0.794)EEK LLGS(-30.87)T(-24.11)LT(-5.93)S(5.93)EEK 0 0 1 0 Q9H9F9 Q9H9F9 Q9H9F9 ACTR5 Actin-related protein 5 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 633.3096 2 629.302333 1256.59011 77535.16 1.2627 0.00079462 -0.22134 -0.00013929 1.0414 0.00065532 629.302184456769 633.309213181212 78.315 1.1919 78.315 77.655 78.846 0 436 112 5 0 0 0 0.0010265 1 49788 80.318 24.275 4 1.3259 0.88281 0 28509000 12240000 16269000 3627 1208 1843 2041 5919 5919 2411 LLHNSEDEQSLK 12 1 0 2 Phospho (STY) _LLHNS(ph)EDEQS(ph)LK_ LLHNS(1)EDEQS(1)LK LLHNS(72.52)EDEQS(72.52)LK 0 0 2 0 Q9NSI6 Q9NSI6 Q9NSI6 BRWD1 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 790.8284 2 786.820768 1571.62698 69823.08 0.55351 0.00043551 0.48135 0.00037874 1.0349 0.00081425 786.821023180523 790.828051045581 53.067 1.0108 53.067 52.429 53.44 0 396 83 7 0 0 0 0.001464 1 22156 72.523 60.14 1 0.68805 0.84531 0 21995000 13048000 8946900 3628 1218 1844 2042 5920 5920 2457;2458 LLHNSEDEQSLK 12 1 0 Phospho (STY) _LLHNS(ph)EDEQSLK_ LLHNS(1)EDEQSLK LLHNS(33.24)EDEQS(-33.24)LK 0 0 1 0 Q9NSI6 Q9NSI6 Q9NSI6 BRWD1 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 750.8458 2 746.837603 1491.66065 70869.89 0.93869 0.00070105 0.52243 0.00039017 1.4611 0.0010912 746.837567205904 750.844628940621 60.858 1.1398 60.858 60.306 61.446 0 390 83 7 0 0 0 2.9641E-09 2 27662 101.75 82.43 2 0.78769 0.98893 0 55921000 32021000 23900000 3629 1218 1844 2043 5921;5922 5922 2457;2458 LLHNSEDEQSLK 12 1 0 Phospho (STY) _LLHNS(ph)EDEQSLK_ LLHNS(0.986)EDEQS(0.014)LK LLHNS(18.47)EDEQS(-18.47)LK 0 0 1 0 Q9NSI6 Q9NSI6 Q9NSI6 BRWD1 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 750.8446 2 746.837603 1491.66065 70848.88 1.0449 0.00078037 0.050501 3.7716E-05 1.0954 0.00081808 746.837647684573 750.84468630213 34.589 1.1083 34.589 34.214 35.322 0 515 86 8 0 0 0 4.9609E-05 1 19069 90.759 71.93 2 1.3773 0.919 0 111200000 44396000 66799000 3630 1218 1844 2043 5923 5923 2457;2458 LLHNSEDEQSLKSEIEEEELK 21 2 0 3 Phospho (STY) _LLHNS(ph)EDEQS(ph)LKS(ph)EIEEEELK_ LLHNS(1)EDEQS(1)LKS(1)EIEEEELK LLHNS(42.88)EDEQS(42.88)LKS(42.88)EIEEEELK 0 0 3 1 Q9NSI6 Q9NSI6 Q9NSI6 BRWD1 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 914.3762 3 913.707743 2738.1014 63702.77 0.8446 0.00077172 -0.019414 -1.7739E-05 0.82519 0.00075398 914.041834892412 919.385028743792 105.16 0.88544 105.16 104.74 105.62 0 501 60 11 0 0 0 6.763E-06 1 60780 42.885 35.081 1 0.66468 0.85575 0 120800000 72056000 48740000 3631 1218 1845 2044 5924 5924 2457;2458;2459 LLITSSPKPQTSDRPTDK 18 2 1 Phospho (STY) _LLITSS(ph)PKPQTSDRPTDK_ LLIT(0.1)S(0.1)S(0.529)PKPQT(0.121)S(0.121)DRPT(0.03)DK LLIT(-7.24)S(-7.24)S(6.42)PKPQT(-6.42)S(-6.42)DRPT(-12.51)DK 0 0 1 2 B2RWP5;Q96L73;Q9H6H8;Q658U6;Q9H6B5;A0A1D8GZ55;A0A1D8GZ56 B2RWP5 B2RWP5 NSD1;DKFZp666C163 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 689.0195 3 688.683943 2063.03 NaN NaN NaN 0.11261 7.7552E-05 NaN NaN NaN NaN 78.521 0.65919 78.521 78.191 78.85 0 0 0 0 2.0402E-05 1 41115 54.223 17.111 6 NaN NaN 0 17427000 17427000 0 3632 565 1846 2045 5925 5925 936 LLITSSPKPQTSDRPTDK 18 2 1 Phospho (STY) _LLITSS(ph)PKPQTSDRPTDK_ LLIT(0.026)S(0.08)S(0.753)PKPQT(0.048)S(0.065)DRPT(0.027)DK LLIT(-14.55)S(-9.75)S(9.75)PKPQT(-11.98)S(-10.61)DRPT(-14.44)DK 0 0 1 2 B2RWP5;Q96L73;Q9H6H8;Q658U6;Q9H6B5;A0A1D8GZ55;A0A1D8GZ56 B2RWP5 B2RWP5 NSD1;DKFZp666C163 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 697.363 3 688.683943 2063.03 72704.95 1.0686 0.0007359 -0.21008 -0.00014468 0.85848 0.00059122 689.018069023517 697.697065416225 53.989 2.5882 53.989 52.492 55.081 0 1232 223 8 0 0 0 4.6139E-08 3 32390 72.916 43.44 6 1.7657 1.4603 0 42214000 14766000 27448000 3633 565 1846 2045 5926;5927;5928 5926 936 LLKPGEEPSEYTDEEDTK 18 2 0 Phospho (STY) _LLKPGEEPSEYT(ph)DEEDTK_ LLKPGEEPS(0.022)EY(0.029)T(0.918)DEEDT(0.032)K LLKPGEEPS(-16.19)EY(-15.07)T(14.63)DEEDT(-14.63)K 0 0 1 1 O15173;D3DNX8;U3KQM0 O15173 O15173 PGRMC2 Membrane-associated progesterone receptor component 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 725.9906 3 720.647112 2158.91951 70958.09 0.61694 0.0004446 0.25202 0.00018162 0.86896 0.00062621 720.98159647652 725.989963295116 71.163 0.8317 71.163 70.75 71.581 0 460 80 7 0 0 0 2.1184E-06 3 35637 61.616 55.04 4 0.59405 0.75194 0 66080000 41808000 24273000 3634 923 1847 2046 5929;5930;5931 5930 2843 LLLAEDSEEEVDFLSER 17 0 1 Phospho (STY) _LLLAEDS(ph)EEEVDFLSER_ LLLAEDS(1)EEEVDFLSER LLLAEDS(66.68)EEEVDFLS(-66.68)ER 0 0 1 0 Q14676;B4DYH4;A1Z5I7;A1Z5I6 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1037.4684 2 1037.46683 2072.91911 59962.57 0.85335 0.00088532 -0.038072 -3.9498E-05 0.81528 0.00084582 1037.46683079128 1042.4708343485 126.99 1.4002 126.99 126.59 127.99 0 906 127 11 0 0 0 1.6746E-22 5 77328 115.5 115.5 2 0.58529 0.73992 0 201520000 126020000 75507000 3635 1059 1848 2047 5932;5933;5934;5935;5936 5935 1978 LLLAEDSEEEVDFLSER 17 0 1 Phospho (STY) _LLLAEDS(ph)EEEVDFLSER_ LLLAEDS(1)EEEVDFLSER LLLAEDS(59.43)EEEVDFLS(-59.43)ER 0 0 1 0 Q14676;B4DYH4;A1Z5I7;A1Z5I6 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1037.9697 2 1037.46683 2072.91911 58951.93 0.54778 0.00056831 0.53567 0.00055574 1.0835 0.0011241 1037.46783112094 1042.47135122786 134.64 0.3644 134.64 134.54 134.9 0 79 12 11 0 0 0 1.8356E-16 2 86907 106.36 106.36 2 0.9732 0.64225 0 249210000 127500000 121710000 3636 1059 1848 2047 5937;5938 5937 1978 LLLDDSFETK 10 1 0 Phospho (STY) _LLLDDS(ph)FETK_ LLLDDS(0.849)FET(0.151)K LLLDDS(7.48)FET(-7.48)K 0 0 1 0 E9PPP3;A0A0C4DGF9;B4DRX6;L7RRS0;O00443 E9PPP3 E9PPP3 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 630.7922 2 630.791601 1259.56865 NaN NaN NaN NaN NaN NaN NaN NaN NaN 107.68 1 107.68 107.18 108.18 0 0 0 0 0.0044466 1 62925 56.225 17.591 2 3637 321 1849 2048 5939 5939 503 LLLDPSSPPTK 11 1 0 Phospho (STY) _LLLDPS(ph)SPPTK_ LLLDPS(0.584)S(0.36)PPT(0.057)K LLLDPS(2.1)S(-2.1)PPT(-10.12)K 0 0 1 0 H0YFI1;F5H479;F5GX19;F5H3Y3;Q6IAA8 H0YFI1 H0YFI1 LAMTOR1 Ragulator complex protein LAMTOR1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 624.3231 2 624.317786 1246.62102 75979.42 1.3188 0.00082335 2.002 0.0012499 3.3208 0.0020733 624.820926972206 628.325753058625 96.715 0.36781 96.715 96.514 96.882 7.6294E-06 58 27 4 0 0 0 0.0028123 1 54433 71.555 53.293 3 1.7878 2.1369 0 13446000 5606300 7839700 3638 824 1850 2049 5940 5940 1419;1420 LLLDPSSPPTK 11 1 0 Phospho (STY) _LLLDPSS(ph)PPTK_ LLLDPS(0.241)S(0.609)PPT(0.15)K LLLDPS(-4.03)S(4.03)PPT(-6.09)K 0 0 1 0 H0YFI1;F5H479;F5GX19;F5H3Y3;Q6IAA8 H0YFI1 H0YFI1 LAMTOR1 Ragulator complex protein LAMTOR1 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 628.3257 2 624.317786 1246.62102 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.561 1 99.561 99.061 100.06 0 0 0 0 0.0029344 1 64038 55.04 33.534 3 3639 824 1850 2049 5941 5941 1419;1420 LLLEFTDTSYEEK 13 1 0 Unmodified _LLLEFTDTSYEEK_ 0 0 0 0 A4UJ43;A0A0A0MTN3;Q6FGJ9;Q59EJ5;P21266 A4UJ43 A4UJ43 GSTM3 Glutathione S-transferase Mu 3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 798.3995 2 794.393061 1586.77157 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.98 1 113.98 113.48 114.48 0 0 0 0 0.0015463 1 67806 52.79 21.562 1 3640 299 1851 2050 5942 5942 LLLETHLPSK 10 1 0 Unmodified _LLLETHLPSK_ 0 0 0 0 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 384.5664 3 384.23253 1149.67576 99775.09 0.031014 1.1916E-05 -0.6079 -0.00023358 -0.57689 -0.00022166 384.232292791241 386.903766090601 106.53 0.35069 106.53 106.3 106.65 0 73 22 5 0 0 0 0.022107 1 61981 29.936 23.276 1 0.70415 0.83687 0 11528000 6302800 5224700 3641 504 1852 2051 5943 5943 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 0 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;P57053;Q96A08;L0R4T3;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257 B2R4S9;A0A024RCJ2 B2R4S9 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS;HIST1H2BA;ABCF2;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 481.3147 2 477.305136 952.595718 86415.18 0.57515 0.00027452 -0.31535 -0.00015052 0.2598 0.000124 477.304953754128 481.31194914453 108.09 2.3144 108.09 107.25 109.57 0 825 180 8 0 0 0 0.00086026 3 63567 85.212 6.2978 1 0.83913 1.0352 0 991360000 543400000 447960000 3642 21;211 1853 2052 5944;5945;5946 5946 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 0 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;P57053;Q96A08;L0R4T3;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257 B2R4S9;A0A024RCJ2 B2R4S9 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS;HIST1H2BA;ABCF2;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 481.3122 2 477.305136 952.595718 87227.94 0.28913 0.000138 -0.16031 -7.6518E-05 0.12881 6.1483E-05 477.304964655541 481.312009335759 145.27 0.25912 145.27 145.11 145.37 0 39 18 8 0 0 0 0.00087414 2 83654 85.064 18.382 1 0.49855 0.6193 0 96427000 52938000 43488000 3643 21;211 1853 2052 5947;5948 5948 LLLPGELAK 9 1 0 Unmodified _LLLPGELAK_ 0 0 0 0 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;P57053;Q96A08;L0R4T3;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257 B2R4S9;A0A024RCJ2 B2R4S9 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS;HIST1H2BA;ABCF2;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 481.3126 2 477.305136 952.595718 86716.32 0.70085 0.00033452 -0.2697 -0.00012873 0.43115 0.00020579 477.304940785212 481.311971651432 104.8 2.5071 104.8 103.81 106.32 -7.6294E-06 1118 239 7 0 0 0 0.024252 1 67519 61.962 4.6814 1 0.8407 0.56194 0 159180000 86325000 72853000 3644 21;211 1853 2052 5949 5949 LLMADQDSPLDLTVR 15 0 1 Oxidation (M),Phospho (STY) _LLM(ox)ADQDS(ph)PLDLTVR_ LLM(1)ADQDSPLDLTVR LLMADQDS(0.999)PLDLT(0.001)VR LLM(106.14)ADQDSPLDLTVR LLMADQDS(28.36)PLDLT(-28.36)VR 0 1 1 0 A0A1B0GUH9;A2VCT1;Q96JN0 A0A1B0GUH9 A0A1B0GUH9 LCOR Ligand-dependent corepressor MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 896.925 2 891.92081 1781.82707 64001.54 0.87179 0.00077757 -0.25248 -0.00022519 0.61931 0.00055238 892.421958536199 896.924830891339 113.56 0.86969 113.56 113.18 114.05 0 464 76 8 0 0 0 1.4897E-12 2 67311 106.14 91.721 2 1.6303 2.0577 0 82526000 31028000 51497000 3645 385 1854 2053 5950;5951 5950 97 656 LLMADQDSPLDLTVR 15 0 1 Oxidation (M),Phospho (STY) _LLM(ox)ADQDS(ph)PLDLTVR_ LLM(1)ADQDSPLDLTVR LLMADQDS(0.991)PLDLT(0.009)VR LLM(90.75)ADQDSPLDLTVR LLMADQDS(20.56)PLDLT(-20.56)VR 0 1 1 0 A0A1B0GUH9;A2VCT1;Q96JN0 A0A1B0GUH9 A0A1B0GUH9 LCOR Ligand-dependent corepressor MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 896.9264 2 891.92081 1781.82707 63487.01 1.2396 0.0011057 -0.063804 -5.6908E-05 1.1758 0.0010488 891.920939337932 896.924949287764 121.14 0.91783 121.14 120.61 121.53 0 489 85 8 0 0 0 2.6755E-07 2 78052 90.754 90.754 2 2.5657 1.7445 0 56549000 15935000 40615000 3646 385 1854 2053 5952;5953 5952 97 656 LLPQGLAVYASPENK 15 1 0 Phospho (STY) _LLPQGLAVYAS(ph)PENK_ LLPQGLAVY(0.028)AS(0.972)PENK LLPQGLAVY(-15.46)AS(15.46)PENK 0 0 1 0 B4DDZ7;B4DUJ1;Q5SZR1;Q9BYD2 B4DDZ7 B4DDZ7 MRPL9 39S ribosomal protein L9, mitochondrial ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 840.4232 2 840.423845 1678.83314 NaN NaN NaN 0.16857 0.00014167 NaN NaN NaN NaN 110.57 0.43709 110.57 110.44 110.87 7.6294E-06 0 0 0 0.00015304 1 65264 62.055 41.215 2 NaN NaN 0 5412600 5412600 0 3647 616 1855 2054 5954 5954 1018 LLPSVWSESEDGAGSPPPYR 20 0 1 Phospho (STY) _LLPSVWSESEDGAGS(ph)PPPYR_ LLPSVWS(0.002)ES(0.005)EDGAGS(0.993)PPPYR LLPS(-42.06)VWS(-26.53)ES(-23.21)EDGAGS(23.21)PPPY(-39.12)R 0 0 1 0 K7EN65;K7EMA9;Q59EP6;K7EPZ6;B4DUR3;A0A0A0MS90;A8K654;B4DI41;Q9UIS9 K7EN65 K7EN65 MBD1 Methyl-CpG-binding domain protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1118.0068 2 1112.50154 2222.98853 57475.45 0.75618 0.00084125 -0.43669 -0.00048582 0.31949 0.00035543 1113.0033251752 1118.00681186821 121.5 0.59383 121.5 121.18 121.77 7.6294E-06 399 56 10 0 0 0 4.1762E-07 1 78451 57.482 43.441 5 1.7612 1.3001 0 23449000 7973200 15476000 3648 293 1856 2055 5955 5955 470 LLSASEEDENMGGEDK 16 1 0 Oxidation (M),2 Phospho (STY) _LLS(ph)AS(ph)EEDENM(ox)GGEDK_ LLSASEEDENM(1)GGEDK LLS(1)AS(1)EEDENMGGEDK LLSASEEDENM(52.58)GGEDK LLS(52.58)AS(52.58)EEDENMGGEDK 0 1 2 0 Q6RI45 Q6RI45 Q6RI45 BRWD3 Bromodomain and WD repeat-containing protein 3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 954.3414 2 950.333776 1898.653 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.453 1 62.453 61.953 62.953 0 0 0 0 0.00013678 1 29167 52.576 38.157 1 3649 1125 1857 2056 5956 5956 318 2142;2143 LLSSESEDEEEFIPLAQR 18 0 1 2 Phospho (STY) _LLS(ph)S(ph)ESEDEEEFIPLAQR_ LLS(0.667)S(0.667)ES(0.667)EDEEEFIPLAQR LLS(0)S(0)ES(0)EDEEEFIPLAQR 0 0 2 0 D6RIT8;F8W714;Q96AY2 D6RIT8 D6RIT8 EME1 Crossover junction endonuclease EME1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1131.9811 2 1126.474 2250.93346 57495.68 0.24226 0.0002729 0.61516 0.00069296 0.85742 0.00096586 1126.97619447142 1131.47866400249 131.66 0.6264 131.66 131.35 131.98 0 223 55 5 0 0 0 1.5637E-06 2 80099 68.44 60.53 3 0.49299 0.60312 0 22019000 16024000 5995000 3650 777 1858 2057 5957;5958 5958 1314;1315;1316 LLSSESEDEEEFIPLAQR 18 0 1 3 Phospho (STY) _LLS(ph)S(ph)ES(ph)EDEEEFIPLAQR_ LLS(1)S(1)ES(1)EDEEEFIPLAQR LLS(72.96)S(72.96)ES(72.96)EDEEEFIPLAQR 0 0 3 0 D6RIT8;F8W714;Q96AY2 D6RIT8 D6RIT8 EME1 Crossover junction endonuclease EME1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1166.9608 2 1166.45717 2330.89979 55227.82 0.64543 0.00075287 0.04491 5.2386E-05 0.69034 0.00080526 1166.95874756217 1171.46153650096 146.74 2.3081 146.74 145.71 148.02 0 1797 228 11 0 0 0 1.9005E-07 2 89725 72.958 72.958 1 1.197 0.89598 0 21342000 9441600 11901000 3651 777 1858 2058 5959;5960 5959 1314;1315;1316 LLSTCGLVQSVELQEKPDLAESPK 24 2 0 Phospho (STY) _LLSTCGLVQSVELQEKPDLAES(ph)PK_ LLSTCGLVQSVELQEKPDLAES(1)PK LLS(-62.09)T(-62.57)CGLVQS(-42.91)VELQEKPDLAES(42.91)PK 0 0 1 1 Q9Y3A4 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 908.1198 3 907.785398 2720.33436 65255.86 0.89741 0.00081465 0.26701 0.00024238 1.1644 0.001057 908.120393390573 913.462504481244 118.01 0.7334 118.01 117.7 118.43 7.6294E-06 473 64 10 0 0 0 2.8795E-16 1 70825 77.731 61.066 4 1.2974 1.594 0 33892000 14795000 19097000 3652 1250 1859 2059 5961 5961 2574 LLVDVDESTLSPEEQK 16 1 0 Phospho (STY) _LLVDVDESTLS(ph)PEEQK_ LLVDVDES(0.001)T(0.01)LS(0.989)PEEQK LLVDVDES(-32.72)T(-19.75)LS(19.75)PEEQK 0 0 1 0 A0JLT9;Q32Q20;A0PJH5;Q7Z497;O75533 A0JLT9 A0JLT9 SF3B1 Splicing factor 3B subunit 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 941.4421 2 941.440086 1880.86562 62996.45 0.99522 0.00093694 -0.20612 -0.00019405 0.7891 0.00074289 941.440118838839 945.446942823032 104.98 0.91606 104.98 104.57 105.48 -7.6294E-06 388 62 8 0 0 0 1.6328E-36 1 60681 131.4 115.02 3 1.3308 1.6638 0 64915000 28967000 35948000 3653 398 1860 2060 5962 5962 678 LLVDVDESTLSPEEQK 16 1 0 Phospho (STY) _LLVDVDESTLS(ph)PEEQK_ LLVDVDES(0.007)T(0.034)LS(0.959)PEEQK LLVDVDES(-21.63)T(-14.44)LS(14.44)PEEQK 0 0 1 0 A0JLT9;Q32Q20;A0PJH5;Q7Z497;O75533 A0JLT9 A0JLT9 SF3B1 Splicing factor 3B subunit 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 945.4474 2 941.440086 1880.86562 63815.85 1.022 0.00096216 0.33572 0.00031606 1.3577 0.0012782 941.440369769826 945.447496524562 111.48 0.90224 111.48 111.07 111.97 0 449 87 8 0 0 0 1.9551E-06 1 71761 76.82 62.662 3 0.54931 0.35731 0 39103000 25757000 13346000 3654 398 1860 2060 5963 5963 678 LMAEDEEGYRK 11 1 1 Oxidation (M) _LM(ox)AEDEEGYRK_ LM(1)AEDEEGYRK LM(45.65)AEDEEGYRK 0 1 0 1 A7E2E1;Q9HBD4;B9EGQ8;P51532;Q59FZ6;B4DK35;A5D6X0;P51531;A0A0U1RQZ9;F6VDE0 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 452.8748 3 452.874853 1355.60273 93971.94 0.37315 0.00016899 -0.50637 -0.00022932 -0.13322 -6.0332E-05 452.874794862312 458.881947005739 60.85 0.47845 60.85 60.733 61.212 3.8147E-06 90 32 5 0 0 0 0.0034331 1 27994 45.653 35.7 1 1.318 1.4608 0 14163000 4825900 9336600 3655 434;1004 1861 2061 5964 5964 110 LMEEDELPSWIIK 13 1 0 Oxidation (M),Phospho (STY) _LM(ox)EEDELPS(ph)WIIK_ LM(1)EEDELPSWIIK LMEEDELPS(1)WIIK LM(66.99)EEDELPSWIIK LMEEDELPS(66.99)WIIK 0 1 1 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;B3KNW7;B4E0F1;B4DSI8;B4DK35;P51531;A0A0U1RQZ9;F6VDE0;A0A0U1RRG6;B4DSC8 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 849.8884 2 849.888447 1697.76234 71584.62 0.74691 0.00063479 -0.028106 -2.3887E-05 0.7188 0.0006109 850.389846152625 853.895320697435 130.06 0.34634 130.06 129.85 130.2 1.5259E-05 95 33 5 0 0 0 0.0025778 1 79041 66.989 41.603 1 0.74024 0.87651 0 4710000 2422000 2288000 3656 434;1004 1862 2062 5965 5965 111 755 LMELHGEGSSSGK 13 1 0 Oxidation (M) _LM(ox)ELHGEGSSSGK_ LM(1)ELHGEGSSSGK LM(58.83)ELHGEGSSSGK 0 1 0 0 D6R9B6;H0Y9Y4;D6RG13;D6RAT0;Q6NXR8;A8K4W0;P61247 D6R9B6 D6R9B6 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 452.5505 3 449.878486 1346.61363 88276.26 0.33827 0.00015218 0.14762 6.6413E-05 0.48589 0.00021859 449.878397132556 452.549712188513 60.81 0.62321 60.81 60.402 61.025 0 196 43 10 0 0 0 0.0016505 1 27743 58.831 51.774 1 1.3141 1.6275 0 161160000 69490000 91669000 3657 467 1863 2063 5966 5966 126 LMELHGEGSSSGK 13 1 0 Oxidation (M) _LM(ox)ELHGEGSSSGK_ LM(1)ELHGEGSSSGK LM(68.54)ELHGEGSSSGK 0 1 0 0 D6R9B6;H0Y9Y4;D6RG13;D6RAT0;Q6NXR8;A8K4W0;P61247 D6R9B6 D6R9B6 RPS3A 40S ribosomal protein S3a MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 678.3218 2 674.314091 1346.61363 75301.88 0.8439 0.00056905 -1.1786 -0.00079474 -0.33469 -0.00022569 674.313519788005 678.321055899782 60.796 0.29073 60.796 60.674 60.965 0 67 20 5 0 0 0 0.0052571 3 27771 68.536 56.581 1 1.0741 1.3181 0 21390000 10320000 11070000 3658 467 1863 2063 5967;5968;5969 5968 126 LMLSTSEYSQSPK 13 1 0 Oxidation (M),2 Phospho (STY) _LM(ox)LSTS(ph)EYS(ph)QSPK_ LM(1)LSTSEYSQSPK LMLS(0.024)T(0.121)S(0.706)EY(0.201)S(0.516)QS(0.431)PK LM(40.55)LSTSEYSQSPK LMLS(-15.99)T(-8.28)S(7.82)EY(-6.87)S(1.04)QS(-1.04)PK 0 1 2 0 B7Z3E7;A6NNK5;Q12888;C9JXV0;A8KA50 B7Z3E7 B7Z3E7 TP53BP1 Tumor suppressor p53-binding protein 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 827.8306 2 823.824662 1645.63477 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.814 1 74.814 74.314 75.314 0 0 0 0 0.0039588 1 38378 40.552 26.873 15 3659 430 1864 2064 5970 5970 108 743;744 LMPVSLSVQSPAALTAEK 18 1 0 Oxidation (M),Phospho (STY) _LM(ox)PVSLSVQS(ph)PAALTAEK_ LM(1)PVSLSVQSPAALTAEK LMPVS(0.001)LS(0.012)VQS(0.977)PAALT(0.01)AEK LM(72.77)PVSLSVQSPAALTAEK LMPVS(-29.98)LS(-18.99)VQS(18.99)PAALT(-20.04)AEK 0 1 1 0 B7Z830;B4DSW6;A8K194;P54198 B7Z830 B7Z830 HIRA Protein HIRA MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 973.4944 2 969.486317 1936.95808 64641.07 0.68735 0.00066638 -0.31579 -0.00030615 0.37157 0.00036023 969.987213502583 973.494432587403 112.25 0.43915 112.25 112.02 112.46 0 136 39 5 0 0 0 1.3472E-07 1 66506 72.772 63.115 4 0.41221 0.51587 0 26765000 18109000 8655200 3660 443 1865 2065 5971 5971 116 769 LNDLEDALQQAK 12 1 0 Unmodified _LNDLEDALQQAK_ 0 0 0 0 H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRG2 H6VRG3;H6VRG2 H6VRG2 KRT1 Keratin, type II cytoskeletal 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 679.3507 2 679.351531 1356.68851 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.644 1 94.644 94.144 95.144 0 0 0 0 0.0017772 1 53018 66.595 43.167 1 + 3661 876;877 1866 2066 5972 5972 LNDLEDALQQAK 12 1 0 Unmodified _LNDLEDALQQAK_ 0 0 0 0 H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRG2 H6VRG3;H6VRG2 H6VRG2 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 679.3525 2 679.351531 1356.68851 NaN NaN NaN 0.056075 3.8094E-05 NaN NaN NaN NaN 92.007 1.3452 92.007 91.205 92.551 0 0 0 0 1.6831E-88 1 59260 192.38 150.93 1 NaN NaN 0 12828000 12828000 0 + 3662 876;877 1866 2066 5973 5973 LNFDMTASPK 10 1 0 Oxidation (M),Phospho (STY) _LNFDM(ox)TAS(ph)PK_ LNFDM(1)TASPK LNFDMT(0.008)AS(0.992)PK LNFDM(128.54)TASPK LNFDMT(-20.69)AS(20.69)PK 0 1 1 0 A0A087WYS3;H7C4X9;A0A087WVZ6;Q9ULU4;A0A087WV57;A6H8Y8 A0A087WYS3 A0A087WYS3 ZMYND8 Protein kinase C-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 614.2642 2 610.256872 1218.49919 78111.8 0.44587 0.0002721 -0.051165 -3.1224E-05 0.39471 0.00024087 610.256832071821 614.263990856701 66.983 1.4442 66.983 66.38 67.824 0 558 114 7 0 0 0 1.581E-08 4 33083 128.54 27.61 2 0.71581 0.88627 0 187180000 113060000 74123000 3663 258 1867 2067 5974;5975;5976;5977 5977 64 409;2668 LNFDMTASPK 10 1 0 Oxidation (M),Phospho (STY) _LNFDM(ox)TAS(ph)PK_ LNFDM(1)TASPK LNFDMT(0.001)AS(0.999)PK LNFDM(152.4)TASPK LNFDMT(-28.27)AS(28.27)PK 0 1 1 0 A0A087WYS3;H7C4X9;A0A087WVZ6;Q9ULU4;A0A087WV57;A6H8Y8 A0A087WYS3 A0A087WYS3 ZMYND8 Protein kinase C-binding protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 614.2645 2 610.256872 1218.49919 76735.7 0.79368 0.00048435 -0.056379 -3.4405E-05 0.73731 0.00044995 610.256841922191 614.263973319712 61.827 2.4636 61.827 60.677 63.14 0 1147 230 7 0 0 0 6.4514E-22 3 38377 152.4 24.531 2 1.2773 0.84646 0 72481000 30888000 41593000 3664 258 1867 2067 5978;5979;5980 5979 64 409;2668 LNFDMTASPK 10 1 0 Phospho (STY) _LNFDMTAS(ph)PK_ LNFDMT(0.334)AS(0.666)PK LNFDMT(-2.99)AS(2.99)PK 0 0 1 0 A0A087WYS3;H7C4X9;A0A087WVZ6;Q9ULU4;A0A087WV57;A6H8Y8 A0A087WYS3 A0A087WYS3 ZMYND8 Protein kinase C-binding protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 602.2603 2 602.259414 1202.50428 79688.61 0.77249 0.00046524 -0.12246 -7.3754E-05 0.65002 0.00039148 602.259366357977 606.266358280555 94.793 0.57814 94.793 94.384 94.962 0 175 50 5 0 0 0 0.0059367 2 60935 76.522 51.6 2 1.7916 1.3985 0 13804000 5720000 8083800 3665 258 1867 2068 5981;5982 5982 409;2668 LNISFPATGCQK 12 1 0 Unmodified _LNISFPATGCQK_ 0 0 0 0 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 668.3409 2 668.339912 1334.66527 76054.73 0.8701 0.00058152 0.37614 0.00025139 1.2462 0.00083291 668.340283660022 672.347177080176 95.583 0.60583 95.583 95.239 95.845 0 228 61 5 0 0 0 0.03254 1 61443 49.3 49.3 1 1.5373 1.1912 0 12725000 5508700 7216500 3666 405 1868 2069 5983 5983 LNLTLSPAK 9 1 0 Phospho (STY) _LNLTLS(ph)PAK_ LNLT(0.106)LS(0.894)PAK LNLT(-9.24)LS(9.24)PAK 0 0 1 0 A0A087WTW5;A7E2C0;Q9UKL3 A0A087WTW5 A0A087WTW5 CASP8AP2 CASP8-associated protein 2 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 522.7825 2 518.775557 1035.53656 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.256 1 99.256 98.756 99.756 0 0 0 0 0.010828 1 63850 48.115 30.129 2 3667 247 1869 2070 5984 5984 389 LNMLHPMSQKK 11 2 0 Phospho (STY) _LNMLHPMS(ph)QKK_ LNMLHPMS(1)QKK LNMLHPMS(46.59)QKK 0 0 1 1 Q9UI78 Q9UI78 Q9UI78 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 711.8499 2 703.83784 1405.66113 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.29 1 117.29 116.79 117.79 7.6294E-06 0 0 0 0.00781 1 70236 46.592 22.249 1 3668 1230 1870 2071 5985 5985 2508 LNQDVLLVNESK 12 1 0 Phospho (STY) _LNQDVLLVNES(ph)K_ LNQDVLLVNES(1)K LNQDVLLVNES(105.46)K 0 0 1 0 B3KNC8;Q9UPZ3 B3KNC8 B3KNC8 HPS5 Hermansky-Pudlak syndrome 5 protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 730.3696 2 726.360714 1450.70687 68720 1.3666 0.00099265 -0.50545 -0.00036714 0.86115 0.00062551 726.360852762789 730.367517149635 102.91 1.3579 102.91 102.23 103.59 0 539 97 8 0 0 0 1.6713E-09 3 59434 105.46 75.917 1 1.1869 1.4701 0 159540000 75057000 84486000 3669 580 1871 2072 5986;5987;5988 5988 963 LNQDVLLVNESK 12 1 0 Phospho (STY) _LNQDVLLVNES(ph)K_ LNQDVLLVNES(1)K LNQDVLLVNES(86.31)K 0 0 1 0 B3KNC8;Q9UPZ3 B3KNC8 B3KNC8 HPS5 Hermansky-Pudlak syndrome 5 protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 730.368 2 726.360714 1450.70687 71304 0.99355 0.00072168 0.11567 8.4016E-05 1.1092 0.00080569 726.360627988352 730.367694928007 106.21 1.332 106.21 105.48 106.82 -7.6294E-06 516 92 8 0 0 0 0.00030387 4 61579 86.313 46.396 1 1.2981 1.6152 0 77959000 35639000 42320000 3670 580 1871 2072 5989;5990;5991;5992 5990 963 LNQDVLLVNESK 12 1 0 Phospho (STY) _LNQDVLLVNES(ph)K_ LNQDVLLVNES(1)K LNQDVLLVNES(84.48)K 0 0 1 0 B3KNC8;Q9UPZ3 B3KNC8 B3KNC8 HPS5 Hermansky-Pudlak syndrome 5 protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 730.3681 2 726.360714 1450.70687 71804.93 0.86697 0.00062973 0.008988 6.5286E-06 0.87596 0.00063626 726.360545811725 730.367835392379 107.33 1.0595 107.33 106.72 107.78 0 455 86 8 0 0 0 0.0004087 3 62763 84.479 52.882 1 1.2181 1.5153 0 80819000 36744000 44075000 3671 580 1871 2072 5993;5994;5995 5995 963 LNQDVLLVNESK 12 1 0 Phospho (STY) _LNQDVLLVNES(ph)K_ LNQDVLLVNES(1)K LNQDVLLVNES(96.64)K 0 0 1 0 B3KNC8;Q9UPZ3 B3KNC8 B3KNC8 HPS5 Hermansky-Pudlak syndrome 5 protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 726.3591 2 726.360714 1450.70687 71139.23 1.1979 0.00087008 -0.0070328 -5.1083E-06 1.1908 0.00086497 726.360727687643 730.367757132485 109.11 1.9707 109.11 108.64 110.61 0 1078 190 10 0 0 0 4.4276E-06 5 70005 96.64 67.835 1 1.6468 1.0999 0 258890000 92144000 166750000 3672 580 1871 2072 5996;5997;5998;5999;6000 5997 963 LNQDVLLVNESK 12 1 0 Phospho (STY) _LNQDVLLVNES(ph)K_ LNQDVLLVNES(1)K LNQDVLLVNES(91.96)K 0 0 1 0 B3KNC8;Q9UPZ3 B3KNC8 B3KNC8 HPS5 Hermansky-Pudlak syndrome 5 protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 730.3683 2 726.360714 1450.70687 70704.93 1.1724 0.00085159 -0.046238 -3.3585E-05 1.1262 0.000818 726.36064190631 730.367738946337 112.17 1.4816 112.17 111.63 113.11 7.6294E-06 937 144 8 0 0 0 9.342E-06 4 72459 91.961 52.044 1 1.836 1.224 0 105410000 33013000 72393000 3673 580 1871 2072 6001;6002;6003;6004 6003 963 LNQDVLLVNESK 12 1 0 Phospho (STY) _LNQDVLLVNES(ph)K_ LNQDVLLVNES(1)K LNQDVLLVNES(58.67)K 0 0 1 0 B3KNC8;Q9UPZ3 B3KNC8 B3KNC8 HPS5 Hermansky-Pudlak syndrome 5 protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 730.3683 2 726.360714 1450.70687 70192.56 1.1639 0.00084544 0.4003 0.00029076 1.5642 0.0011362 726.360567275543 730.367645034558 113.61 1.9246 113.61 112.94 114.86 0 851 179 8 0 0 0 0.0074372 3 73086 58.674 34.42 1 1.6813 1.1167 0 83442000 32102000 51340000 3674 580 1871 2072 6005;6006;6007 6005 963 LNQSPSLAPVK 11 1 0 Phospho (STY) _LNQS(ph)PSLAPVK_ LNQS(0.999)PS(0.001)LAPVK LNQS(32.86)PS(-32.86)LAPVK 0 0 1 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 617.3156 2 617.315578 1232.6166 75801.59 0.50444 0.0003114 0.018133 1.1194E-05 0.52257 0.00032259 617.315547609645 621.322689647166 70.936 1.7149 70.936 70.158 71.873 0 870 163 7 0 0 0 6.8534E-86 5 35579 198.97 152.96 2 0.58498 0.72296 0 433940000 267230000 166720000 3675 552 1872 2073 6008;6009;6010;6011;6012 6010 913 LNQSPSLAPVK 11 1 0 Phospho (STY) _LNQS(ph)PSLAPVK_ LNQS(0.979)PS(0.021)LAPVK LNQS(16.65)PS(-16.65)LAPVK 0 0 1 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 617.3164 2 617.315578 1232.6166 77592.91 0.9708 0.00059929 -0.13114 -8.0957E-05 0.83965 0.00051833 617.315551598329 621.322544693545 68.224 2.7406 68.224 67.296 70.037 0 1291 239 9 0 0 0 1.4092E-08 3 42867 107.97 70.408 2 1.5516 1.0367 0 210980000 78696000 132290000 3676 552 1872 2073 6013;6014;6015 6015 913 LNSGGGLSEELGSAR 15 0 1 Phospho (STY) _LNS(ph)GGGLSEELGSAR_ LNS(0.998)GGGLS(0.002)EELGSAR LNS(26.88)GGGLS(-26.88)EELGS(-43.25)AR 0 0 1 0 A0A0G2JIS2;A0A024RCN9;B7Z852;A2ABF8;A0A0G2JIR1;A2ABF9;A0A0G2JK64;Q96KQ7;Q59FM7 A0A0G2JIS2 A0A0G2JIS2 EHMT2 Histone-lysine N-methyltransferase EHMT2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 763.8465 2 763.845959 1525.67737 70566.8 0.97163 0.00074218 0.30579 0.00023358 1.2774 0.00097575 763.846211980135 768.850212434748 84.348 0.68328 84.348 84.053 84.736 -7.6294E-06 240 58 6 0 0 0 0.0011995 1 54146 52.045 29.128 3 1.1339 0.89913 0 13309000 6814900 6494000 3677 213 1873 2074 6016 6016 331 LNSPPSSIYK 10 1 0 Phospho (STY) _LNS(ph)PPSSIYK_ LNS(0.987)PPS(0.005)S(0.007)IYK LNS(21.44)PPS(-22.81)S(-21.44)IY(-35.69)K 0 0 1 0 C9JKH7;Q53EP0 C9JKH7 C9JKH7 FNDC3B Fibronectin type III domain-containing protein 3B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 597.29 2 593.281204 1184.54785 79836.11 0.86279 0.00051188 0.54772 0.00032495 1.4105 0.00083683 593.281486041197 597.28880193585 62.327 1.0256 62.327 61.956 62.981 -3.8147E-06 252 97 4 0 0 0 0.0080768 1 38771 59.116 13.237 4 1.3698 1.0925 0 6614700 3156300 3458400 3678 741 1874 2075 6017 6017 1248 LNVSQDDVLYALK 13 1 0 Phospho (STY) _LNVS(ph)QDDVLYALK_ LNVS(1)QDDVLYALK LNVS(56.15)QDDVLY(-56.15)ALK 0 0 1 0 B7Z8H0;Q96F82;A8K794;Q13415 B7Z8H0 B7Z8H0 ORC1L;ORC1 Origin recognition complex subunit 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 779.3817 2 779.381646 1556.74874 75210.09 0.7844 0.00061134 -0.11512 -8.9722E-05 0.66928 0.00052162 779.381272512483 783.388846588483 119.87 0.32922 119.87 119.68 120.01 0 81 29 4 0 0 0 0.00047853 3 72107 77.527 56.864 2 0.88339 1.0467 0 5461400 2804800 2656600 3679 487 1875 2076 6018;6019;6020 6020 839 LNYLDPR 7 0 1 Phospho (STY) _LNY(ph)LDPR_ LNY(1)LDPR LNY(105.12)LDPR 0 0 1 0 B9EG90;P11387;Q9BVT2;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;Q8TBP3;H0YAR3;B4E061 B9EG90 B9EG90 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 490.7276 2 485.723325 969.432097 88936.93 0.31412 0.00015257 0.23252 0.00011294 0.54664 0.00026551 485.723275867207 490.727407859477 63.661 2.2784 63.661 62.646 64.924 3.8147E-06 516 176 7 0 0 0 0.005255 1 30026 105.12 45.911 1 0.9838 1.2415 0 75146000 31800000 43347000 3680 729 1876 2077 6021 6021 3019 LNYLDPR 7 0 1 Phospho (STY) _LNY(ph)LDPR_ LNY(1)LDPR LNY(97.03)LDPR 0 0 1 0 B9EG90;P11387;Q9BVT2;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;Q8TBP3;H0YAR3;B4E061 B9EG90 B9EG90 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 485.7237 2 485.723325 969.432097 86655.97 0.75972 0.00036901 -0.0075283 -3.6567E-06 0.75219 0.00036536 485.723222816268 490.727392232704 56.369 2.0345 56.369 55.507 57.541 -3.8147E-06 763 174 6 0 0 0 0.0039257 4 34250 116.9 61.399 1 0.66816 0.45665 0 50425000 30134000 20291000 3681 729 1876 2077 6022;6023;6024;6025 6022 3019 LNYLDPR 7 0 1 Phospho (STY) _LNY(ph)LDPR_ LNY(1)LDPR LNY(56.27)LDPR 0 0 1 0 B9EG90;P11387;Q9BVT2;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;Q8TBP3;H0YAR3;B4E061 B9EG90 B9EG90 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 490.7283 2 485.723325 969.432097 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.639 1 57.639 57.139 58.139 0 0 0 0 0.01042 1 35486 56.27 25.212 1 3682 729 1876 2077 6026 6026 3019 LNYLDPR 7 0 1 Phospho (STY) _LNY(ph)LDPR_ LNY(1)LDPR LNY(66.07)LDPR 0 0 1 0 B9EG90;P11387;Q9BVT2;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;Q8TBP3;H0YAR3;B4E061 B9EG90 B9EG90 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 490.7278 2 485.723325 969.432097 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.704 1 58.704 58.204 59.204 0 0 0 0 0.0091321 1 36224 66.073 35.888 1 3683 729 1876 2077 6027 6027 3019 LPDIFSVYFR 10 0 1 Phospho (STY) _LPDIFS(ph)VYFR_ LPDIFS(0.899)VY(0.101)FR LPDIFS(9.52)VY(-9.52)FR 0 0 1 0 Q14669 Q14669 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 668.822 2 668.820496 1335.62644 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.157 1 76.157 75.657 76.657 0 0 0 0 0.020252 1 39381 40.589 9.1674 2 3684 1057 1877 2078 6028 6028 1972 LPDLSPVENK 10 1 0 Phospho (STY) _LPDLS(ph)PVENK_ LPDLS(1)PVENK LPDLS(183.37)PVENK 0 0 1 0 H7C5N8;E7EPN9;Q9Y520 H7C5N8 H7C5N8 PRRC2C Protein PRRC2C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 596.2865 2 596.286486 1190.55842 78091.77 0.60003 0.00035779 0.070345 4.1946E-05 0.67038 0.00039974 596.286455648594 600.293533079523 88.012 1.4761 88.012 87.209 88.685 -7.6294E-06 506 134 5 0 0 0 6.8724E-53 4 48054 183.37 143.53 1 1.174 1.457 0 107850000 50899000 56949000 3685 789 1878 2079 6029;6030;6031;6032 6032 1331 LPDLSPVENK 10 1 0 Phospho (STY) _LPDLS(ph)PVENK_ LPDLS(1)PVENK LPDLS(100.02)PVENK 0 0 1 0 H7C5N8;E7EPN9;Q9Y520 H7C5N8 H7C5N8 PRRC2C Protein PRRC2C MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 596.2866 2 596.286486 1190.55842 78680.68 1.1229 0.00066955 -0.14032 -8.3673E-05 0.98255 0.00058588 596.286338515905 600.293422166712 90.931 1.3887 90.931 90.39 91.779 0 668 133 6 0 0 0 5.168E-06 4 58843 100.02 69.704 1 2.6842 1.7737 0 64904000 17786000 47118000 3686 789 1878 2079 6033;6034;6035;6036 6036 1331 LPEASQSPLVLK 12 1 0 Phospho (STY) _LPEASQS(ph)PLVLK_ LPEAS(0.164)QS(0.836)PLVLK LPEAS(-7.08)QS(7.08)PLVLK 0 0 1 0 Q59FW1;H0Y4T7;A0A024R6P5;E7ESY4;Q13330;Q9BRL8;F8W9Y9 Q59FW1 Q59FW1 MTA1 Metastasis-associated protein MTA1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 681.3594 2 681.357443 1360.70033 74044.59 1.1608 0.00079093 0.64676 0.00044068 1.8076 0.0012316 681.357822369922 685.364899463121 96.762 1.3737 96.762 96.064 97.437 0 688 115 9 0 0 0 1.1304E-41 4 54733 157.35 87.534 2 0.76606 0.9473 0 331870000 190950000 140920000 3687 124 1879 2080 6037;6038;6039;6040 6039 184 LPEASQSPLVLK 12 1 0 Phospho (STY) _LPEASQS(ph)PLVLK_ LPEASQS(1)PLVLK LPEAS(-50.84)QS(50.84)PLVLK 0 0 1 0 Q59FW1;H0Y4T7;A0A024R6P5;E7ESY4;Q13330;Q9BRL8;F8W9Y9 Q59FW1 Q59FW1 MTA1 Metastasis-associated protein MTA1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 685.3649 2 681.357443 1360.70033 73630.1 1.0627 0.00072407 -0.052897 -3.6042E-05 1.0098 0.00068802 681.357403746269 685.364471629919 100.96 1.4265 100.96 100.3 101.73 0 939 133 10 0 0 0 5.7217E-66 3 65098 182.7 126.57 2 1.6346 1.0923 0 183410000 70564000 112850000 3688 124 1879 2080 6041;6042;6043 6043 184 LPEHPEGGEPEDDEAPAK 18 1 0 Unmodified _LPEHPEGGEPEDDEAPAK_ 0 0 0 0 Q9NX58;A8K3Y5 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 639.957 3 639.621798 1915.84357 76705.69 0.84927 0.00054321 0.18151 0.0001161 1.0308 0.00065931 639.622196550977 642.29310873116 63.25 0.38833 63.25 63.066 63.455 3.8147E-06 167 34 7 0 0 0 2.7685E-07 2 29692 71.558 63.985 1 0.85058 1.0734 0 30572000 16957000 13616000 3689 1222 1880 2081 6044;6045 6045 LPIPSPQR 8 0 1 Phospho (STY) _LPIPS(ph)PQR_ LPIPS(1)PQR LPIPS(52.49)PQR 0 0 1 0 B7Z830;B4DSW6;A8K194;P54198 B7Z830 B7Z830 HIRA Protein HIRA MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 499.2593 2 494.254792 986.495032 87508.06 0.58895 0.00029109 -0.25073 -0.00012393 0.33822 0.00016717 494.254491258761 499.258855492434 75.658 0.79111 75.658 75.329 76.12 0 170 67 4 0 0 0 0.0188 1 48049 52.49 20.019 1 1.2943 1.0503 0 6941600 3237800 3703700 3690 443 1881 2082 6046 6046 770 LPISDSPPDTQEIHVIEQEK 20 1 0 Phospho (STY) _LPISDS(ph)PPDTQEIHVIEQEK_ LPISDS(0.999)PPDT(0.001)QEIHVIEQEK LPIS(-35.61)DS(31.19)PPDT(-31.19)QEIHVIEQEK 0 0 1 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 788.3816 3 785.708705 2354.10429 67772.48 0.89551 0.00070361 -0.029064 -2.2836E-05 0.86644 0.00068077 786.043152314233 788.714263692886 107.28 1.4059 107.28 106.74 108.15 7.6294E-06 986 111 13 0 0 0 3.8588E-74 6 62899 161.68 140.79 3 1.35 1.6648 0 1175000000 492020000 682970000 3691 1170 1882 2083 6047;6048;6049;6050;6051;6052 6051 2292;2293;2973 LPISDSPPDTQEIHVIEQEK 20 1 0 Phospho (STY) _LPISDS(ph)PPDTQEIHVIEQEK_ LPISDS(1)PPDTQEIHVIEQEK LPIS(-42.06)DS(36.44)PPDT(-36.44)QEIHVIEQEK 0 0 1 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 786.0445 3 785.708705 2354.10429 67887.2 1.2133 0.00095331 -0.11189 -8.7912E-05 1.1014 0.0008654 786.04397221647 788.713897524679 111.42 2.0966 111.42 110.75 112.85 0 1524 205 12 0 0 0 7.671E-75 2 71514 165.66 140.04 3 2.6599 1.7708 0 1821000000 501020000 1320000000 3692 1170 1882 2083 6053;6054 6053 2292;2293;2973 LPISDSPPDTQEIHVIEQEK 20 1 0 Phospho (STY) _LPIS(ph)DSPPDTQEIHVIEQEK_ LPIS(0.503)DS(0.491)PPDT(0.006)QEIHVIEQEK LPIS(0.11)DS(-0.11)PPDT(-19.13)QEIHVIEQEK 0 0 1 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1178.5612 2 1178.05942 2354.10429 56092.45 0.66865 0.00078771 -0.038043 -4.4817E-05 0.63061 0.0007429 1178.56063929387 1182.56788641128 111.46 1.0463 111.46 110.92 111.97 0 923 101 12 0 0 0 0.00018703 1 71598 41.621 32.912 3 2.7201 1.8156 0 376160000 109670000 266490000 3693 1170 1882 2083 6055 6055 2292;2293;2973 LPISDSPPDTQEIHVIEQEK 20 1 0 2 Phospho (STY) _LPISDS(ph)PPDT(ph)QEIHVIEQEK_ LPIS(0.48)DS(0.564)PPDT(0.956)QEIHVIEQEK LPIS(-0.77)DS(0.77)PPDT(10.72)QEIHVIEQEK 0 0 2 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 812.6983 3 812.364149 2434.07062 68253 0.75825 0.00061598 -0.25123 -0.00020409 0.50702 0.00041188 812.698356877748 815.369545825637 111.32 0.52116 111.32 111.08 111.6 0 152 45 6 0 0 0 7.9012E-06 1 65758 49.638 43.671 3 0.57186 0.70002 0 20051000 11698000 8353200 3694 1170 1882 2084 6056 6056 2292;2293;2973 LPIVNEDDELVAIIAR 16 0 1 Unmodified _LPIVNEDDELVAIIAR_ 0 0 0 0 H0Y4R1;P12268;Q6QE17;B7Z1G4;E7ETK5;Q6RUP9 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 890.4968 2 890.496184 1778.97781 65309.58 1.1989 0.0010676 1.0269 0.00091442 2.2258 0.001982 890.496530787467 896.003479855806 133.52 0.097778 133.52 133.47 133.57 0 12 3 4 0 0 0 2.9325E-06 2 81339 79.693 36.181 1 1.3894 1.52 0 6081900 2594600 3487300 3695 850 1883 2085 6057;6058 6057 LPLQDVYK 8 1 0 Unmodified _LPLQDVYK_ 0 0 0 0 A0A087WV01;Q9H2I7;Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q53GE9;Q53GA1;Q5VTE0;P68104;A9X7H1;Q96RE1;B4DV42;Q9NZS6;A0A087WVQ9;Q53G85;A8K9C4;Q8IUB0;Q53HR1;B4DNE0;Q05639;Q504Z0;B4E2C5;Q59GP5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q6P4C9 A0A087WV01 A0A087WV01 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 492.7483 2 488.279118 974.543683 90688.81 0.64883 0.00031681 -0.14368 -7.0158E-05 0.50514 0.00024665 488.278954951148 492.286180231814 90.226 0.67308 90.226 89.832 90.505 0 103 58 4 0 0 0 0.019201 1 49592 73.26 20.094 1 3.3032 3.9522 0 13815000 3510300 10305000 3696 252 1884 2086 6059 6059 LPLQDVYK 8 1 0 Unmodified _LPLQDVYK_ 0 0 0 0 A0A087WV01;Q9H2I7;Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q53GE9;Q53GA1;Q5VTE0;P68104;A9X7H1;Q96RE1;B4DV42;Q9NZS6;A0A087WVQ9;Q53G85;A8K9C4;Q8IUB0;Q53HR1;B4DNE0;Q05639;Q504Z0;B4E2C5;Q59GP5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q6P4C9 A0A087WV01 A0A087WV01 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 492.287 2 488.279118 974.543683 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.833 1 89.833 89.333 90.333 0 0 0 0 0.028258 1 49304 45.335 17.81 1 3697 252 1884 2086 6060 6060 LPLQDVYK 8 1 0 Unmodified _LPLQDVYK_ 0 0 0 0 A0A087WV01;Q9H2I7;Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q53GE9;Q53GA1;Q5VTE0;P68104;A9X7H1;Q96RE1;B4DV42;Q9NZS6;A0A087WVQ9;Q53G85;A8K9C4;Q8IUB0;Q53HR1;B4DNE0;Q05639;Q504Z0;B4E2C5;Q59GP5;Q96C29;Q8TBL1;Q6P082;Q96CD8;Q6P4C9 A0A087WV01 A0A087WV01 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 492.2865 2 488.279118 974.543683 92689.13 0.78007 0.00038089 -0.048998 -2.3925E-05 0.73108 0.00035697 488.279128112973 492.286110234751 79.021 0.49036 79.021 78.836 79.327 0 76 45 4 0 0 0 0.031324 1 50456 65.252 20.171 1 1.5128 1.3184 0 3343300 1207600 2135700 3698 252 1884 2086 6061 6061 LPLVPESPR 9 0 1 Phospho (STY) _LPLVPES(ph)PR_ LPLVPES(1)PR LPLVPES(70.1)PR 0 0 1 0 C9J0I9;A4D1L4;Q86WB0 C9J0I9 C9J0I9 ZC3HC1;NIPA Nuclear-interacting partner of ALK MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 544.2818 2 544.281007 1086.54746 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.582 1 97.582 97.082 98.082 -7.6294E-06 0 0 0 0.0024034 1 62782 70.1 25.653 1 3699 413 1885 2087 6062 6062 707 LPNNSSRPSTPTINVLESK 19 1 1 Phospho (STY) _LPNNSSRPST(ph)PTINVLESK_ LPNNS(0.034)S(0.161)RPS(0.161)T(0.6)PT(0.044)INVLESK LPNNS(-12.47)S(-5.72)RPS(-5.72)T(5.72)PT(-11.33)INVLES(-41.78)K 0 0 1 1 Q75MP9;F2YMM1;Q75MQ0;S4S3R8;A0A090N8E9;Q15910;B7Z8K5 Q75MP9 Q75MP9 EZH2 Histone-lysine N-methyltransferase EZH2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 712.0233 3 712.022847 2133.04671 72973.57 1.0945 0.00077929 0.079662 5.6721E-05 1.1741 0.00083601 712.357335158603 718.030425112448 93.752 0.69995 93.752 93.342 94.042 0 192 57 6 0 0 0 1.0175E-08 1 52301 69.704 59.721 6 0.68825 0.80214 0 32287000 15296000 16990000 3700 278 1886 2088 6063 6063 2678 LPQSSSSESSPPSPQPTK 18 1 0 Phospho (STY) _LPQSSSSESSPPS(ph)PQPTK_ LPQSSSSES(0.003)S(0.005)PPS(0.986)PQPT(0.005)K LPQS(-60.68)S(-51.45)S(-39.84)S(-34.47)ES(-25.03)S(-22.69)PPS(22.69)PQPT(-22.69)K 0 0 1 0 A0A140VK53;Q9UQ35;I3L4D8;I3L182;Q9UQ39 A0A140VK53 A0A140VK53 SRRM2 Serine/arginine repetitive matrix protein 2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 960.9336 2 960.93296 1919.85137 NaN NaN NaN 0.23521 0.00022602 NaN NaN NaN NaN 43.481 1.1429 43.481 42.912 44.055 0 0 0 0 1.9499E-11 1 15665 91.64 70.903 8 NaN NaN 0 27471000 27471000 0 3701 383 1887 2089 6064 6064 614 LPSDPQESTKKSPR 14 2 1 Phospho (STY) _LPSDPQES(ph)TKKSPR_ LPS(0.006)DPQES(0.331)T(0.331)KKS(0.331)PR LPS(-17.67)DPQES(0)T(0)KKS(0)PR 0 0 1 2 H7C4B2;A0A075B6Q3;Q5H9F3 H7C4B2 H7C4B2 BCORL1 BCL-6 corepressor-like protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 550.6016 3 550.601331 1648.78217 80717.89 0.75123 0.00041363 -0.1619 -8.9142E-05 0.58933 0.00032448 550.601174871821 559.280119606984 17.549 0.23336 17.549 17.423 17.656 0 43 8 8 0 0 0 0.00086999 1 4788 52.172 52.172 4 0.55539 0.4665 0 15720000 9523200 6196400 3702 237 1888 2090 6065 6065 364;365;2664 LPSGSGAASPTGSAVDIR 18 0 1 Phospho (STY) _LPSGSGAAS(ph)PTGSAVDIR_ LPSGSGAAS(0.981)PT(0.018)GS(0.001)AVDIR LPS(-89.07)GS(-77.91)GAAS(17.42)PT(-17.42)GS(-30.45)AVDIR 0 0 1 0 Q09666;B4DTV0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 866.9122 2 861.906548 1721.79854 66699.99 0.79961 0.00068919 -0.10503 -9.0526E-05 0.69458 0.00059866 861.906460127809 866.910620150502 77.33 1.0922 77.33 76.891 77.984 0 526 97 7 0 0 0 3.244E-74 3 40534 169.43 141.22 5 1.2266 1.5491 0 111610000 51426000 60188000 3703 1042 1889 2091 6066;6067;6068 6067 1942;1943 LPSGSGAASPTGSAVDIR 18 0 1 Phospho (STY) _LPSGSGAAS(ph)PTGSAVDIR_ LPSGSGAAS(0.944)PT(0.042)GS(0.014)AVDIR LPS(-46.95)GS(-43.2)GAAS(13.56)PT(-13.56)GS(-18.27)AVDIR 0 0 1 0 Q09666;B4DTV0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 866.9119 2 861.906548 1721.79854 66052.73 1.1586 0.00099861 0.042007 3.6206E-05 1.2006 0.0010348 862.409183291515 866.910323701417 79.464 1.2581 79.464 78.731 79.989 0 407 119 8 0 0 0 4.4104E-11 1 50721 89.859 69.002 5 1.4754 0.99735 0 75339000 33202000 42138000 3704 1042 1889 2091 6069 6069 1942;1943 LPSGSGAASPTGSAVDIR 18 0 1 2 Phospho (STY) _LPS(ph)GSGAAS(ph)PTGSAVDIR_ LPS(0.989)GS(0.011)GAAS(0.976)PT(0.02)GS(0.004)AVDIR LPS(19.74)GS(-19.74)GAAS(16.92)PT(-16.92)GS(-23.68)AVDIR 0 0 2 0 Q09666;B4DTV0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 906.8938 2 901.889713 1801.76487 65073.1 0.58503 0.00052763 0.13869 0.00012508 0.72372 0.00065271 901.889643599426 906.893887125345 84.644 0.86189 84.644 84.231 85.093 0 378 76 6 0 0 0 3.1774E-38 3 45754 134.29 112.29 10 1.3196 1.6653 0 74760000 33529000 41232000 3705 1042 1889 2092 6070;6071;6072 6072 1942;1943 LPSPTSPFSSLSQDQAATSK 20 1 0 2 Phospho (STY) _LPS(ph)PT(ph)SPFSSLSQDQAATSK_ LPS(0.896)PT(0.658)S(0.404)PFS(0.017)S(0.017)LS(0.006)QDQAAT(0.001)SK LPS(8.11)PT(2.6)S(-2.6)PFS(-18.06)S(-18.06)LS(-23.1)QDQAAT(-32.69)S(-36.81)K 0 0 2 0 E9PMS6;B7Z8W3;A0A1P7ZIM8;A0A0A0MTE2;E9PMT2;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMP7;H0Y424;H0YDG6 E9PMS6 E9PMS6 LMO7 LIM domain only protein 7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1105.4767 2 1104.97671 2207.93887 58106.85 0.4969 0.00054906 -1.2911 -0.0014266 -0.79419 -0.00087756 1105.47285653559 1108.98379676303 116.15 0.70616 116.15 115.8 116.51 0 375 62 8 0 0 0 0.00014794 1 69328 41.513 33.921 28 1.7067 2.1646 0 36546000 13030000 23516000 3706 391 1890 2093 6073 6073 664;665;2708 LPSSPVYEDAASFK 14 1 0 Phospho (STY) _LPSS(ph)PVYEDAASFK_ LPS(0.23)S(0.77)PVYEDAASFK LPS(-5.25)S(5.25)PVY(-59.38)EDAAS(-83.01)FK 0 0 1 0 H0YEV2;B3KRK4;H0YCD9;B4E358;A0A024R5M3;Q53HG7;Q14247 H0YEV2 H0YEV2 CTTN Src substrate cortactin ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 795.8589 2 795.858004 1589.70146 NaN NaN NaN 0.29245 0.00023275 NaN NaN NaN NaN 99.329 0.75266 99.329 98.979 99.732 0 0 0 0 1.3357E-35 1 56616 125.22 91.435 4 NaN NaN 0 15230000 15230000 0 3707 109 1891 2094 6074 6074 143 LPTSLKK 7 2 0 Phospho (STY) _LPTS(ph)LKK_ LPT(0.189)S(0.811)LKK LPT(-6.32)S(6.32)LKK 0 0 1 1 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 441.7552 2 433.740986 865.46742 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.151 1 58.151 57.651 58.651 0 0 0 0 0.029809 1 25696 46.39 21.571 2 3708 1232 1892 2095 6075 6075 2513 LQDGTPQAALSPLTPAR 17 0 1 Phospho (STY) _LQDGTPQAALS(ph)PLTPAR_ LQDGTPQAALS(0.888)PLT(0.112)PAR LQDGT(-34.55)PQAALS(9)PLT(-9)PAR 0 0 1 0 Q59F18;B3KY54;B3KUD6;B3KY41;B4E229;B4DI56;A0A087WVP4;A0A087X1R1;P53814 Q59F18 Q59F18 SMTN Smoothelin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 913.9597 2 908.453666 1814.89278 66421.13 1.1522 0.0010467 -0.014604 -1.3267E-05 1.1376 0.0010334 908.453434266623 913.457790868992 106.75 0.74306 106.75 106.4 107.14 0 247 69 5 0 0 0 0.0005018 1 68518 43.261 39.218 3 5.9047 4.6113 0 15142000 3339400 11802000 3709 255 1893 2096 6076 6076 401 LQEELSENDK 10 1 0 Unmodified _LQEELSENDK_ 0 0 0 0 B7ZLZ7;A0A024R158;O95347;Q05BV1;A8K984;Q2KQ72;Q7Z2X1;Q6IPS5;Q5T821;A0JLM9;Q05D74;Q32Q15 B7ZLZ7 B7ZLZ7 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 606.7966 2 602.788232 1203.56191 80234.3 0.82624 0.00049805 0.24395 0.00014705 1.0702 0.0006451 602.788374469738 606.795456315713 28.11 0.25729 28.11 27.979 28.236 0 58 19 4 0 0 0 0.00096278 2 13972 88.495 54.243 1 2.0262 1.5715 0 7306800 2293500 5013300 3710 39 1894 2097 6077;6078 6077 LQEELSENDKK 11 2 0 Unmodified _LQEELSENDKK_ 0 0 0 1 B7ZLZ7;A0A024R158;O95347;Q05BV1;A8K984;Q2KQ72;Q7Z2X1;Q6IPS5;Q5T821;A0JLM9;Q05D74;Q32Q15 B7ZLZ7 B7ZLZ7 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 444.8929 3 444.892901 1331.65687 93271.21 0.029609 1.3173E-05 0.21694 9.6513E-05 0.24654 0.00010969 444.892951864974 450.235703467098 61.86 0.45554 61.86 61.762 62.217 0 108 28 8 0 0 0 0.00030771 2 28690 81.09 73.026 1 0.8724 1.0908 0 42766000 22834000 19932000 3711 39 1895 2098 6079;6080 6079 LQEKLSPPYSSPQEFAQDVGR 21 1 1 2 Phospho (STY) _LQEKLS(ph)PPYS(ph)SPQEFAQDVGR_ LQEKLS(0.982)PPY(0.023)S(0.519)S(0.475)PQEFAQDVGR LQEKLS(18.22)PPY(-18.04)S(0.39)S(-0.39)PQEFAQDVGR 0 0 2 1 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 852.3843 3 846.04341 2535.1084 67115.2 0.62154 0.00052585 0.74114 0.00062704 1.3627 0.0011529 846.378405243472 852.386617990959 109.57 0.65131 109.57 109.25 109.9 7.6294E-06 187 46 6 0 0 0 5.0102E-09 3 64335 57.688 47.429 6 1.9324 2.2554 0 33547000 13173000 20374000 3712 542 1896 2099 6081;6082;6083 6081 901;902 LQLDLSSINISAK 13 1 0 Phospho (STY) _LQLDLS(ph)SINISAK_ LQLDLS(0.488)S(0.488)INIS(0.025)AK LQLDLS(0)S(0)INIS(-12.92)AK 0 0 1 0 A0A024R9G7;Q6PL18 A0A024R9G7 A0A024R9G7 ATAD2 ATPase family AAA domain-containing protein 2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 741.3849 2 741.384189 1480.75383 NaN NaN NaN NaN NaN NaN NaN NaN NaN 125.79 1 125.79 125.29 126.29 0 0 0 0 0.00034907 1 76266 57.434 14.591 3 3713 166 1897 2100 6084 6084 256;257 LQLDLSSINISAK 13 1 0 Phospho (STY) _LQLDLS(ph)SINISAK_ LQLDLS(0.877)S(0.12)INIS(0.003)AK LQLDLS(8.62)S(-8.62)INIS(-25.01)AK 0 0 1 0 A0A024R9G7;Q6PL18 A0A024R9G7 A0A024R9G7 ATAD2 ATPase family AAA domain-containing protein 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 745.3917 2 741.384189 1480.75383 NaN NaN NaN NaN NaN NaN NaN NaN NaN 125.81 1 125.81 125.31 126.31 7.6294E-06 0 0 0 0.00027259 1 76281 59.185 37.934 3 3714 166 1897 2100 6085 6085 256;257 LQLEETMPSPYGR 13 0 1 Oxidation (M),Phospho (STY) _LQLEETM(ox)PS(ph)PYGR_ LQLEETM(1)PSPYGR LQLEETMPS(1)PYGR LQLEETM(174.59)PSPYGR LQLEET(-47.02)MPS(46.72)PY(-46.72)GR 0 1 1 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B4DKD0;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 813.8596 2 808.854938 1615.69532 67141.97 0.81582 0.00065988 -0.012608 -1.0198E-05 0.80322 0.00064968 808.855195457034 813.859283482237 78.42 1.7956 78.42 77.514 79.31 0 929 158 9 0 0 0 4.877E-54 6 41159 174.59 140.59 3 0.67111 0.84826 0 182440000 107860000 74581000 3715 1032 1898 2101 6086;6087;6088;6089;6090;6091 6089 295 1866 LQLEETMPSPYGR 13 0 1 Oxidation (M),Phospho (STY) _LQLEETM(ox)PS(ph)PYGR_ LQLEETM(1)PSPYGR LQLEET(0.025)MPS(0.958)PY(0.017)GR LQLEETM(48.11)PSPYGR LQLEET(-15.84)MPS(15.84)PY(-17.56)GR 0 1 1 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B4DKD0;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 813.8594 2 808.854938 1615.69532 66789.9 1.1831 0.00095696 -0.27032 -0.00021865 0.91278 0.00073831 808.8550413379 813.858928803243 80.197 1.8064 80.197 79.277 81.083 -7.6294E-06 767 172 7 0 0 0 0.0051545 2 51039 48.112 48.112 3 1.0212 0.7133 0 36591000 17916000 18675000 3716 1032 1898 2101 6092;6093 6093 295 1866 LQLQGLDLSSR 11 0 1 Phospho (STY) _LQLQGLDLS(ph)SR_ LQLQGLDLS(0.835)S(0.165)R LQLQGLDLS(7.03)S(-7.03)R 0 0 1 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 655.33 2 655.329217 1308.64388 74297.84 0.79269 0.00051947 0.051037 3.3446E-05 0.84373 0.00055292 655.329220510975 660.333379302019 109.95 0.88428 109.95 109.47 110.36 0 367 69 7 0 0 0 5.4286E-26 2 64552 148.62 49.673 2 0.88889 1.1218 0 75752000 41088000 34664000 3717 999 1899 2102 6094;6095 6095 1812;1813 LQLQGLDLSSR 11 0 1 Phospho (STY) _LQLQGLDLS(ph)SR_ LQLQGLDLS(0.5)S(0.5)R LQLQGLDLS(0)S(0)R 0 0 1 0 P49454 P49454 P49454 CENPF Centromere protein F MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 660.3344 2 655.329217 1308.64388 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.38 1 110.38 109.88 110.88 -7.6294E-06 0 0 0 0.0052141 1 65140 50.354 10.729 2 3718 999 1899 2102 6096 6096 1812;1813 LQLQGLDLSSR 11 0 1 Phospho (STY) _LQLQGLDLSS(ph)R_ LQLQGLDLS(0.416)S(0.584)R LQLQGLDLS(-1.48)S(1.48)R 0 0 1 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 655.3301 2 655.329217 1308.64388 74003.06 1.3345 0.00087453 -0.25708 -0.00016847 1.0774 0.00070606 655.329111431824 660.333066454412 116.38 0.88916 116.38 115.96 116.85 7.6294E-06 422 83 8 0 0 0 0.0076797 2 74798 61.375 12.634 2 1.2474 0.88834 0 29808000 12757000 17051000 3719 999 1899 2102 6097;6098 6098 1812;1813 LQLSFQDDDSISR 13 0 1 2 Phospho (STY) _LQLS(ph)FQDDDS(ph)ISR_ LQLS(1)FQDDDS(0.5)IS(0.5)R LQLS(36.48)FQDDDS(0)IS(0)R 0 0 2 0 K7ELX0 K7ELX0 K7ELX0 CEP192 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 842.3395 2 842.336782 1682.65901 68382.99 0.75728 0.00063788 0.45613 0.00038422 1.2134 0.0010221 842.337020045693 847.341791126803 107.13 0.64905 107.13 106.8 107.44 0 114 54 5 0 0 0 0.0030871 1 62367 63.894 49.636 3 0.56221 0.64075 0 11305000 7275700 4029600 3720 904 1900 2103 6099 6099 1528;1529;1530 LQQEQDLRR 9 0 2 Unmodified _LQQEQDLRR_ 0 0 0 1 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 395.8824 3 395.882671 1184.62618 95590.4 -0.15022 -5.9469E-05 -0.018741 -7.4194E-06 -0.16896 -6.6888E-05 395.882575894462 402.554821229259 60.905 0.56343 60.905 60.787 61.35 0 128 40 5 0 0 0 0.0015897 2 27856 66.692 38.487 1 0.86694 1.0594 0 22183000 12286000 9896800 3721 1167 1901 2104 6100;6101 6101 LQQGAGLESPQGQPEPGAASPQR 23 0 1 Phospho (STY) _LQQGAGLES(ph)PQGQPEPGAASPQR_ LQQGAGLES(1)PQGQPEPGAASPQR LQQGAGLES(88.45)PQGQPEPGAAS(-88.45)PQR 0 0 1 0 Q6ZW18;Q9H6F5 Q6ZW18;Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1192.0562 2 1192.05553 2382.09652 56154.18 0.21298 0.00025389 0.0062951 7.5041E-06 0.21928 0.00026139 1192.55697708508 1197.56116892799 63.126 1.0588 63.126 62.581 63.64 -3.8147E-06 695 87 10 0 0 0 2.5805E-56 3 29811 137.64 137.64 2 0.86239 1.0899 0 169570000 93226000 76349000 3722 1207;1129 1902 2105 6102;6103;6104 6103 2158;2159 LQQGAGLESPQGQPEPGAASPQR 23 0 1 Phospho (STY) _LQQGAGLESPQGQPEPGAAS(ph)PQR_ LQQGAGLESPQGQPEPGAAS(1)PQR LQQGAGLES(-95.61)PQGQPEPGAAS(95.61)PQR 0 0 1 0 Q6ZW18;Q9H6F5 Q6ZW18;Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1192.0541 2 1192.05553 2382.09652 56061.13 0.1962 0.00023388 0.035551 4.2379E-05 0.23175 0.00027626 1192.55694882518 1197.56115878799 64.488 1.28 64.488 63.909 65.189 7.6294E-06 804 91 13 0 0 0 6.6277E-144 3 30421 195.03 178.15 2 0.68032 0.86179 0 627280000 376990000 250300000 3723 1207;1129 1902 2105 6105;6106;6107 6105 2158;2159 LQQGAGLESPQGQPEPGAASPQR 23 0 1 Phospho (STY) _LQQGAGLES(ph)PQGQPEPGAASPQR_ LQQGAGLES(1)PQGQPEPGAASPQR LQQGAGLES(94.84)PQGQPEPGAAS(-94.84)PQR 0 0 1 0 Q6ZW18;Q9H6F5 Q6ZW18;Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1192.5576 2 1192.05553 2382.09652 55272.8 0.36857 0.00043936 1.1868 0.0014147 1.5554 0.0018541 1192.55761785889 1197.56377299032 62.522 1.2486 62.522 62.016 63.264 3.8147E-06 991 118 11 0 0 0 1.2114E-55 1 39084 134.66 124.86 2 0.85376 0.56304 0 257750000 138850000 118890000 3724 1207;1129 1902 2105 6108 6108 2158;2159 LQQGAGLESPQGQPEPGAASPQR 23 0 1 Phospho (STY) _LQQGAGLESPQGQPEPGAAS(ph)PQR_ LQQGAGLESPQGQPEPGAAS(1)PQR LQQGAGLES(-86.87)PQGQPEPGAAS(86.87)PQR 0 0 1 0 Q6ZW18;Q9H6F5 Q6ZW18;Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1192.5575 2 1192.05553 2382.09652 55525.7 0.45456 0.00054187 0.097719 0.00011649 0.55228 0.00065835 1192.55707390031 1197.56125237502 63.905 1.7263 63.905 63.264 64.991 0 1219 154 12 0 0 0 7.5039E-162 3 39614 206.49 181.43 2 0.39236 0.25644 0 403190000 292310000 110880000 3725 1207;1129 1902 2105 6109;6110;6111 6109 2158;2159 LQQQAALSPTTAPAVSSVSK 20 1 0 Phospho (STY) _LQQQAALS(ph)PTTAPAVSSVSK_ LQQQAALS(0.954)PT(0.038)T(0.008)APAVSSVSK LQQQAALS(13.99)PT(-13.99)T(-20.91)APAVS(-56.11)S(-54.51)VS(-58.86)K 0 0 1 0 A0A0U1RRM1;B3KSZ4;Q8WXI9;A0A0U1RR30 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1032.5228 2 1032.52228 2063.03 60257.31 0.4625 0.00047754 -0.18314 -0.0001891 0.27936 0.00028845 1033.02364041782 1036.52921390222 85.442 1.111 85.442 84.983 86.094 0 811 106 10 0 0 0 1.0072E-54 4 45938 141.31 141.31 6 0.69325 0.85682 0 421090000 251040000 170050000 3726 369 1903 2106 6112;6113;6114;6115 6113 588 LQQQAALSPTTAPAVSSVSK 20 1 0 Phospho (STY) _LQQQAALS(ph)PTTAPAVSSVSK_ LQQQAALS(0.995)PT(0.004)T(0.001)APAVSSVSK LQQQAALS(23.86)PT(-23.86)T(-30.91)APAVS(-56.57)S(-63.39)VS(-72.01)K 0 0 1 0 A0A0U1RRM1;B3KSZ4;Q8WXI9;A0A0U1RR30 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1033.0243 2 1032.52228 2063.03 60140.77 0.68029 0.00070241 0.40243 0.00041551 1.0827 0.0011179 1032.52274815641 1037.0311626063 89.952 1.3298 89.952 89.456 90.786 0 1045 126 11 0 0 0 6.2713E-75 2 58209 166.29 154.37 6 2.0876 1.394 0 293490000 93545000 199950000 3727 369 1903 2106 6116;6117 6117 588 LQQQQRPEDAEDGAEGGGKR 20 1 2 Unmodified _LQQQQRPEDAEDGAEGGGKR_ 0 0 0 2 Q08J23;A0A140T9Y7 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 543.2637 4 543.012435 2168.02064 80856.21 0.51777 0.00028115 -0.3759 -0.00020412 0.14186 7.7033E-05 543.262784088084 550.019996402971 61.615 0.3832 61.615 61.423 61.807 3.8147E-06 128 25 7 0 0 0 0.00018194 2 28389 34.649 25.069 1 0.92198 1.0559 0 33267000 15528000 17739000 3728 1041 1904 2107 6118;6119 6119 LQQTVPADASPDSK 14 1 0 Phospho (STY) _LQQTVPADASPDS(ph)K_ LQQT(0.001)VPADAS(0.383)PDS(0.616)K LQQT(-28.31)VPADAS(-2.07)PDS(2.07)K 0 0 1 0 A0A0F6QNT9;Q9NS56 A0A0F6QNT9 A0A0F6QNT9 TOPORS E3 ubiquitin-protein ligase Topors ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 772.8582 2 768.85071 1535.68687 NaN NaN NaN -0.12796 -9.8384E-05 NaN NaN NaN NaN 48.132 0.57315 48.132 47.744 48.317 0 0 0 0 0.0004236 1 18737 63.727 37.129 3 NaN NaN 0 2342200 0 2342200 3729 337 1905 2108 6120 6120 531 LQSEDSAKTEEVDEEKK 17 3 0 Phospho (STY) _LQS(ph)EDSAKTEEVDEEKK_ LQS(0.995)EDS(0.004)AKT(0.001)EEVDEEKK LQS(23.53)EDS(-23.53)AKT(-29.84)EEVDEEKK 0 0 1 2 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 690.3177 3 682.303457 2043.88854 NaN NaN NaN 0.32265 0.00022015 NaN NaN NaN NaN 19.315 0.35666 19.315 19.068 19.425 0 0 0 0 7.2243E-07 1 6321 61.345 48.446 3 NaN NaN 0 19347000 0 19347000 3730 1232 1906 2109 6121 6121 2514 LQSFDSPERK 10 1 1 Phospho (STY) _LQSFDS(ph)PERK_ LQS(0.001)FDS(0.999)PERK LQS(-31.16)FDS(31.16)PERK 0 0 1 1 B4DNY1;B3KSK6;E9PGM9;A8K6Q4;P78332 B4DNY1 B4DNY1 RBM6 RNA-binding protein 6 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 652.8042 2 643.792467 1285.57038 NaN NaN NaN -0.13129 -8.4527E-05 NaN NaN NaN NaN 29.021 0.45399 29.021 28.786 29.24 0 0 0 0 0.025889 1 14665 52.79 22.983 2 NaN NaN 0 9368700 0 9368700 3731 482 1907 2110 6122 6122 834 LQTLSPALK 9 1 0 Phospho (STY) _LQTLS(ph)PALK_ LQT(0.001)LS(0.999)PALK LQT(-30.64)LS(30.64)PALK 0 0 1 0 B7Z8H0;Q96F82;A8K794;Q13415 B7Z8H0 B7Z8H0 ORC1L;ORC1 Origin recognition complex subunit 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 525.7839 2 525.783383 1049.55221 84406.33 0.79055 0.00041566 -0.18494 -9.7237E-05 0.60561 0.00031842 525.78322152483 529.790282054893 86.199 1.1525 86.199 85.644 86.797 0 528 106 7 0 0 0 0.0059541 1 55167 64.439 37.11 2 1.4623 0.97062 0 80170000 34134000 46036000 3732 487 1908 2111 6123 6123 840 LQTPNTFPK 9 1 0 2 Phospho (STY) _LQT(ph)PNT(ph)FPK_ LQT(1)PNT(1)FPK LQT(88.6)PNT(88.6)FPK 0 0 2 0 B2RAU8;A0A0A0MRM9;Q14978;Q96J17 B2RAU8 B2RAU8 NOLC1 Nucleolar and coiled-body phosphoprotein 1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 607.2611 2 603.253804 1204.49306 NaN NaN NaN 0.39538 0.00023851 NaN NaN NaN NaN 68.709 0.95646 68.709 68.237 69.193 0 0 0 0 5.0514E-07 1 34362 88.596 22.54 1 NaN NaN 0 36029000 0 36029000 3733 287 1909 2112 6124 6124 2680;2681 LQTPNTFPK 9 1 0 2 Phospho (STY) _LQT(ph)PNT(ph)FPK_ LQT(1)PNT(1)FPK LQT(64.22)PNT(64.22)FPK 0 0 2 0 B2RAU8;A0A0A0MRM9;Q14978;Q96J17 B2RAU8 B2RAU8 NOLC1 Nucleolar and coiled-body phosphoprotein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 607.261 2 603.253804 1204.49306 79345 0.9359 0.00056458 -0.059879 -3.6122E-05 0.87602 0.00052846 603.253714904777 607.260728056838 73.5 1.2105 73.5 72.957 74.168 0 502 102 7 0 0 0 0.0021522 2 46460 64.224 19.584 1 1.4701 0.956 0 33133000 13815000 19319000 3734 287 1909 2112 6125;6126 6125 2680;2681 LQVYEGGGQPPPQDLPGSPK 20 1 0 Phospho (STY) _LQVYEGGGQPPPQDLPGS(ph)PK_ LQVYEGGGQPPPQDLPGS(1)PK LQVY(-37.7)EGGGQPPPQDLPGS(37.7)PK 0 0 1 0 A0A0C4DGP2;A0A0C4DGP5;Q86Y91 A0A0C4DGP2 A0A0C4DGP2 KIF18B Kinesin-like protein;Kinesin-like protein KIF18B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1077.0142 2 1072.50663 2142.9987 60295.79 0.20742 0.00022246 0.26893 0.00028842 0.47635 0.00051089 1073.00802427692 1076.51418779311 88.06 1.0225 88.06 87.511 88.533 0 418 93 6 0 0 0 1.4108E-05 2 47746 51.726 40.143 2 0.643 0.81442 0 43023000 24538000 18485000 3735 326 1910 2113 6127;6128 6127 516 LRDPAQQVR 9 0 2 Unmodified _LRDPAQQVR_ 0 0 0 1 Q15021;B4E0B7;B3KMS0;B3KY03 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 361.5403 3 361.540357 1081.59924 97946.85 -0.12046 -4.3553E-05 0.056348 2.0372E-05 -0.064116 -2.3181E-05 361.540316379771 368.212522270961 72.294 0.61936 72.294 72.008 72.628 0 195 50 7 0 0 0 0.012967 1 36486 64.485 47.708 1 0.79738 0.99379 0 133450000 73812000 59639000 3736 1067 1911 2114 6129 6129 LREDLER 7 0 2 Unmodified _LREDLER_ 0 0 0 1 P62269;J3JS69 P62269 P62269 RPS18 40S ribosomal protein S18 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 317.5103 3 310.838291 929.493044 104738.7 -0.52817 -0.00016417 0.39683 0.00012335 -0.13134 -4.0826E-05 310.838371028541 317.510474219538 73.646 1.3876 73.646 73.416 74.803 0 395 120 6 0 0 0 0.034278 1 37749 84.568 25.587 1 0.95249 1.183 0 58112000 27720000 30393000 3737 1018 1912 2115 6130 6130 LREQVEER 8 0 2 Unmodified _LREQVEER_ 0 0 0 1 A8K9K6;O00567;A0PJ92;H0Y653;H0YDU4 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 353.5244 3 353.524484 1057.55162 101722.4 -0.16881 -5.9678E-05 -0.067733 -2.3945E-05 -0.23654 -8.3624E-05 353.524449403226 360.196539213732 65.335 0.29067 65.335 65.189 65.48 0 100 20 6 0 0 0 0.014321 2 31360 99.442 42.161 1 0.73311 0.91189 0 82870000 48575000 34296000 3738 504 1913 2116 6131;6132 6131 LREVIEIEDASPTK 14 1 1 Phospho (STY) _LREVIEIEDAS(ph)PTK_ LREVIEIEDAS(0.946)PT(0.054)K LREVIEIEDAS(12.46)PT(-12.46)K 0 0 1 1 A4LAA3;P46100 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 849.4282 2 840.416217 1678.81788 66054.87 0.87184 0.00073271 0.78427 0.00065911 1.6561 0.0013918 840.416642182376 849.428227650216 98.115 0.50463 98.115 97.642 98.146 0 235 40 8 0 0 0 0.0020768 2 55420 58.079 50.95 2 0.83868 1.0147 0 275110000 154950000 120160000 3739 422 1914 2117 6133;6134 6134 722 LREVIEIEDASPTK 14 1 1 Phospho (STY) _LREVIEIEDAS(ph)PTK_ LREVIEIEDAS(0.715)PT(0.285)K LREVIEIEDAS(4)PT(-4)K 0 0 1 1 A4LAA3;P46100 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 560.948 3 560.613237 1678.81788 82287.69 0.71239 0.00039938 -0.33207 -0.00018616 0.38032 0.00021321 560.947160644246 566.620505630983 98.374 0.22608 98.374 98.27 98.496 0 87 19 6 0 0 0 8.1031E-07 1 55872 89.507 77.341 2 0.74237 0.87202 0 39955000 21295000 18661000 3740 422 1914 2117 6135 6135 722 LREVIEIEDASPTK 14 1 1 Phospho (STY) _LREVIEIEDAS(ph)PTK_ LREVIEIEDAS(0.956)PT(0.044)K LREVIEIEDAS(13.36)PT(-13.36)K 0 0 1 1 A4LAA3;P46100 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 840.4156 2 840.416217 1678.81788 66275.18 0.75851 0.00063747 -0.20426 -0.00017166 0.55425 0.0004658 840.415957649031 849.427297880775 98.378 0.54729 98.378 98.134 98.681 0 136 31 7 0 0 0 0.0023053 1 55951 48.177 48.177 2 0.79328 0.95848 0 247330000 132420000 114910000 3741 422 1914 2117 6136 6136 722 LREVIEIEDASPTK 14 1 1 Phospho (STY) _LREVIEIEDAS(ph)PTK_ LREVIEIEDAS(0.985)PT(0.015)K LREVIEIEDAS(18.17)PT(-18.17)K 0 0 1 1 A4LAA3;P46100 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 849.427 2 840.416217 1678.81788 66172.5 0.65313 0.0005489 -0.49323 -0.00041452 0.1599 0.00013438 840.415753654484 849.427139774173 98.526 0.73967 98.526 98.483 99.222 0 276 60 6 0 0 0 1.766E-19 1 55975 119.56 94.172 2 0.82162 0.98513 0 137060000 71914000 65145000 3742 422 1914 2117 6137 6137 722 LREVIEIEDASPTK 14 1 1 Phospho (STY) _LREVIEIEDAS(ph)PTK_ LREVIEIEDAS(0.806)PT(0.194)K LREVIEIEDAS(6.18)PT(-6.18)K 0 0 1 1 A4LAA3;P46100 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 560.9483 3 560.613237 1678.81788 82273.24 0.65145 0.00036521 -0.97759 -0.00054805 -0.32613 -0.00018283 560.946955492309 566.620160638529 98.57 0.29319 98.57 98.471 98.764 0 75 21 5 0 0 0 0.00086879 1 56085 64.2 52.929 2 0.71911 0.79953 0 15176000 7995500 7180000 3743 422 1914 2117 6138 6138 722 LREVIEIEDASPTK 14 1 1 Phospho (STY) _LREVIEIEDAS(ph)PTK_ LREVIEIEDAS(0.759)PT(0.241)K LREVIEIEDAS(4.99)PT(-4.99)K 0 0 1 1 A4LAA3;P46100 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 560.6136 3 560.613237 1678.81788 80122.14 0.83692 0.00046919 -0.1732 -9.7096E-05 0.66372 0.00037209 560.612985127843 566.620666822588 89.046 1.0018 89.046 88.586 89.588 0 520 97 7 0 0 0 0.00070839 2 57180 65.924 60.029 2 1.4407 1.1088 0 32514000 12428000 20086000 3744 422 1914 2117 6139;6140 6140 722 LREVIEIEDASPTK 14 1 1 Phospho (STY) _LREVIEIEDAS(ph)PTK_ LREVIEIEDAS(0.98)PT(0.02)K LREVIEIEDAS(16.89)PT(-16.89)K 0 0 1 1 A4LAA3;P46100 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 849.4282 2 840.416217 1678.81788 66526.79 1.184 0.00099507 -0.24279 -0.00020404 0.94123 0.00079103 840.415990471698 849.427178225816 89.048 2.4675 89.048 88.018 90.486 0 1326 237 9 0 0 0 1.3542E-17 2 57107 112.44 112.44 2 1.4175 1.0964 0 326850000 133680000 193180000 3745 422 1914 2117 6141;6142 6141 722 LRHDLER 7 0 2 Unmodified _LRHDLER_ 0 0 0 1 P55201;H0Y7B4;Q8N4T7;F6XDC4;E9PSF3;Q86X06;A0A024R4V5;Q9Y4Q3;B7Z926;A0A024R4W4;O95696;B4DZ41;B4E3L9;Q59G93;J3KQ61;E9PI60;A0A024RCX0;Q9ULD4 P55201;Q86X06;E9PI60 Q86X06 BRPF1;BRPF3;BRD1;DKFZp434B094 Peregrin;Bromodomain-containing protein 1;Bromodomain and PHD finger-containing protein 3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 320.1833 3 313.510397 937.509363 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.465 1 91.465 90.965 91.965 7.6294E-06 0 0 0 0.015356 1 50533 53.166 21.232 1 3746 1009;94;219 1915 2118 6143 6143 LRHDLER 7 0 2 Unmodified _LRHDLER_ 0 0 0 1 P55201;H0Y7B4;Q8N4T7;F6XDC4;E9PSF3;Q86X06;A0A024R4V5;Q9Y4Q3;B7Z926;A0A024R4W4;O95696;B4DZ41;B4E3L9;Q59G93;J3KQ61;E9PI60;A0A024RCX0;Q9ULD4 P55201;Q86X06;E9PI60 Q86X06 BRPF1;BRPF3;BRD1;DKFZp434B094 Peregrin;Bromodomain-containing protein 1;Bromodomain and PHD finger-containing protein 3 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 313.5104 3 313.510397 937.509363 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.196 1 92.196 91.696 92.696 0 0 0 0 0.033958 1 51110 31.934 13.204 1 3747 1009;94;219 1915 2118 6144 6144 LRHDLER 7 0 2 Unmodified _LRHDLER_ 0 0 0 1 P55201;H0Y7B4;Q8N4T7;F6XDC4;E9PSF3;Q86X06;A0A024R4V5;Q9Y4Q3;B7Z926;A0A024R4W4;O95696;B4DZ41;B4E3L9;Q59G93;J3KQ61;E9PI60;A0A024RCX0;Q9ULD4 P55201;Q86X06;E9PI60 Q86X06 BRPF1;BRPF3;BRD1;DKFZp434B094 Peregrin;Bromodomain-containing protein 1;Bromodomain and PHD finger-containing protein 3 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 313.51 3 313.510397 937.509363 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.207 1 92.207 91.707 92.707 -7.6294E-06 0 0 0 0.029786 1 51118 34.089 15.11 1 3748 1009;94;219 1915 2118 6145 6145 LRHDLER 7 0 2 Unmodified _LRHDLER_ 0 0 0 1 P55201;H0Y7B4;Q8N4T7;F6XDC4;E9PSF3;Q86X06;A0A024R4V5;Q9Y4Q3;B7Z926;A0A024R4W4;O95696;B4DZ41;B4E3L9;Q59G93;J3KQ61;E9PI60;A0A024RCX0;Q9ULD4 P55201;Q86X06;E9PI60 Q86X06 BRPF1;BRPF3;BRD1;DKFZp434B094 Peregrin;Bromodomain-containing protein 1;Bromodomain and PHD finger-containing protein 3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 320.1823 3 313.510397 937.509363 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.272 1 92.272 91.772 92.772 0 0 0 0 0.019088 1 51166 43.808 9.5551 1 3749 1009;94;219 1915 2118 6146 6146 LRHDLER 7 0 2 Unmodified _LRHDLER_ 0 0 0 1 P55201;H0Y7B4;Q8N4T7;F6XDC4;E9PSF3;Q86X06;A0A024R4V5;Q9Y4Q3;B7Z926;A0A024R4W4;O95696;B4DZ41;B4E3L9;Q59G93;J3KQ61;E9PI60;A0A024RCX0;Q9ULD4 P55201;Q86X06;E9PI60 Q86X06 BRPF1;BRPF3;BRD1;DKFZp434B094 Peregrin;Bromodomain-containing protein 1;Bromodomain and PHD finger-containing protein 3 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 313.5097 3 313.510397 937.509363 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.118 1 93.118 92.618 93.618 0 0 0 0 0.014963 1 51812 54.611 27.474 1 3750 1009;94;219 1915 2118 6147 6147 LRLEEDKPAVER 12 1 2 Unmodified _LRLEEDKPAVER_ 0 0 0 2 Q9Y5J1;B2RAX6 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 485.9166 3 485.603574 1453.78889 88216.23 1.0015 0.00048632 -0.56476 -0.00027425 0.43671 0.00021207 485.603435636408 494.946901929615 102.36 1.6581 102.36 101.8 103.46 0 352 123 6 0 0 0 0.023956 1 59343 26.969 19.767 1 0.85375 0.97455 0 27599000 14446000 13153000 3751 1255 1916 2119 6148 6148 LRLSPSPTSQR 11 0 2 2 Phospho (STY) _LRLS(ph)PS(ph)PTSQR_ LRLS(1)PS(0.941)PT(0.053)S(0.007)QR LRLS(34.34)PS(12.54)PT(-12.54)S(-21.46)QR 0 0 2 1 P02545;W8QEH3;Q5TCI8;Q5I6Y5;Q3BDU5;Q8N519;A0A0C4DGC5;B4DFR3 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 701.3184 2 701.317999 1400.62144 71172.34 0.83658 0.00058671 -0.30504 -0.00021393 0.53154 0.00037278 701.318080890024 711.326131327236 64.387 2.9673 64.387 63.287 66.254 0 1274 223 10 0 0 0 1.0022E-05 4 30673 93.011 68.667 6 0.70483 0.88881 0 2246400000 1272900000 973520000 3752 954 1917 2120 6149;6150;6151;6152 6149 1659;1660 LRLSPSPTSQR 11 0 2 2 Phospho (STY) _LRLS(ph)PS(ph)PTSQR_ LRLS(0.969)PS(0.963)PT(0.054)S(0.014)QR LRLS(15.75)PS(15.3)PT(-15.3)S(-20.9)QR 0 0 2 1 P02545;W8QEH3;Q5TCI8;Q5I6Y5;Q3BDU5;Q8N519;A0A0C4DGC5;B4DFR3 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 467.8814 3 467.881091 1400.62144 88076.55 0.24985 0.0001169 -0.18889 -8.8376E-05 0.060966 2.8525E-05 467.881094758262 474.553138551728 64.514 1.3071 64.514 63.801 65.108 0 286 93 7 0 0 0 0.0045916 1 30806 51.643 34.207 6 0.75876 0.94659 0 169640000 110320000 59324000 3753 954 1917 2120 6153 6153 1659;1660 LRLSPSPTSQR 11 0 2 2 Phospho (STY) _LRLS(ph)PS(ph)PTSQR_ LRLS(0.997)PS(0.98)PT(0.02)S(0.003)QR LRLS(27.01)PS(17.51)PT(-17.51)S(-26.33)QR 0 0 2 1 P02545;W8QEH3;Q5TCI8;Q5I6Y5;Q3BDU5;Q8N519;A0A0C4DGC5;B4DFR3 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 712.8329 2 701.317999 1400.62144 71473.85 1.1621 0.00081503 -0.048692 -3.4149E-05 1.1135 0.00078089 701.318305752834 711.326128006976 56.698 3.7584 56.698 54.818 58.577 -3.8147E-06 1666 328 10 0 0 0 0.0020156 3 34769 70.089 53.313 6 1.0162 0.89507 0 1173100000 581800000 591260000 3754 954 1917 2120 6154;6155;6156 6155 1659;1660 LRLSPSPTSQR 11 0 2 Phospho (STY) _LRLS(ph)PSPTSQR_ LRLS(0.997)PS(0.002)PTSQR LRLS(26.51)PS(-26.51)PT(-34.31)S(-34.31)QR 0 0 1 1 P02545;W8QEH3;Q5TCI8;Q5I6Y5;Q3BDU5;Q8N519;A0A0C4DGC5;B4DFR3 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 671.3431 2 661.334833 1320.65511 75118 0.72944 0.0004824 -0.026558 -1.7564E-05 0.70288 0.00046484 661.334846225241 671.343003170436 70.641 1.266 70.641 69.702 70.968 0 436 122 6 0 0 0 0.00028671 2 35380 87.001 53.776 4 1.0199 1.2699 0 106050000 51738000 54309000 3755 954 1917 2121 6157;6158 6158 1659;1660 LRPEREPR 8 0 3 Unmodified _LRPEREPR_ 0 0 0 2 B2R8R5;Q13263 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 351.5367 3 351.536835 1051.58868 103951.5 -0.062505 -2.1973E-05 0.14675 5.1589E-05 0.084248 2.9616E-05 351.536819901981 361.545147001108 79.852 1.288 79.852 79.052 80.34 0 333 117 5 0 0 0 0.030846 1 42132 27.303 12.637 1 1.5822 1.8408 0 40879000 13586000 27293000 3756 542 1918 2122 6159 6159 LRPHVSPR 8 0 2 Phospho (STY) _LRPHVS(ph)PR_ LRPHVS(1)PR LRPHVS(47.3)PR 0 0 1 1 D6R992;A8K3H9;Q01201 D6R992 D6R992 RELB Transcription factor RelB MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 354.5221 3 347.849964 1040.52806 103292.4 0.19213 6.6833E-05 -0.18395 -6.3989E-05 0.0081769 2.8443E-06 347.849901137105 354.522014424497 18.426 0.27547 18.426 18.268 18.543 0 31 12 4 0 0 0 0.0093501 1 5537 47.302 47.302 1 1.524 1.3816 0 6171400 2341000 3830400 3757 453 1919 2123 6160 6160 787 LRPISDDSESIEESDTR 17 0 2 2 Phospho (STY) _LRPISDDS(ph)ES(ph)IEESDTR_ LRPIS(0.001)DDS(0.999)ES(0.996)IEES(0.004)DTR LRPIS(-29.36)DDS(29.36)ES(24.3)IEES(-24.3)DT(-37.64)R 0 0 2 1 D6R9S4;Q09GN1;Q71F23;A5D8X7;A8K8D2 D6R9S4 D6R9S4 CENPU;MLF1IP Centromere protein U MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1054.9247 2 1054.92468 2107.8348 59282.34 0.32225 0.00033995 0.19326 0.00020388 0.51551 0.00054382 1054.92480281843 1064.93313968205 72.484 1.3071 72.484 71.736 73.043 7.6294E-06 569 110 7 0 0 0 1.807E-10 3 36770 90.453 90.453 10 0.91003 1.1319 0 82435000 41564000 40872000 3758 772 1920 2124 6161;6162;6163 6162 1303;1304;1305 LRPISDDSESIEESDTR 17 0 2 3 Phospho (STY) _LRPIS(ph)DDS(ph)ES(ph)IEESDTR_ LRPIS(0.972)DDS(0.979)ES(0.96)IEES(0.059)DT(0.031)R LRPIS(18.21)DDS(20.14)ES(16.16)IEES(-16.16)DT(-20.14)R 0 0 3 1 D6R9S4;Q09GN1;Q71F23;A5D8X7;A8K8D2 D6R9S4 D6R9S4 CENPU;MLF1IP Centromere protein U MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1104.9149 2 1094.90784 2187.80113 58343.63 0.40547 0.00044396 -0.35515 -0.00038886 0.050323 5.5099E-05 1095.4090988974 1104.91579778001 74.706 1.2232 74.706 74.102 75.325 0 619 109 8 0 0 0 6.0872E-05 2 38077 46.494 40.864 10 0.53424 0.66565 0 124750000 85275000 39475000 3759 772 1920 2125 6164;6165 6164 1303;1304;1305 LRPISDDSESIEESDTR 17 0 2 3 Phospho (STY) _LRPIS(ph)DDS(ph)ES(ph)IEESDTR_ LRPIS(1)DDS(1)ES(0.997)IEES(0.002)DT(0.001)R LRPIS(64.94)DDS(42.52)ES(27.01)IEES(-27.01)DT(-32.3)R 0 0 3 1 D6R9S4;Q09GN1;Q71F23;A5D8X7;A8K8D2 D6R9S4 D6R9S4 CENPU;MLF1IP Centromere protein U MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1094.9076 2 1094.90784 2187.80113 58962.16 0.67723 0.00074151 -0.23581 -0.00025819 0.44142 0.00048332 1094.90737789622 1104.91602704036 81.804 1.3914 81.804 81.021 82.412 0 926 128 10 0 0 0 1.9601E-10 1 52415 89.011 78.244 10 1.0758 0.93811 0 154440000 73012000 81432000 3760 772 1920 2125 6166 6166 1303;1304;1305 LRSEIDNVKK 10 2 1 Unmodified _LRSEIDNVKK_ 0 0 0 2 H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRG2 H6VRG3;H6VRG2 H6VRG2 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 401.2353 3 401.234822 1200.68264 NaN NaN NaN 0.51022 0.00020472 NaN NaN NaN NaN 83.132 0.43346 83.132 83.01 83.444 -7.6294E-06 0 0 0 0.011751 1 44495 48.561 25.545 1 NaN NaN 0 30335000 30335000 0 + 3761 876;877 1921 2126 6167 6167 LRSEIDNVKK 10 2 1 Unmodified _LRSEIDNVKK_ 0 0 0 2 H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRG2 H6VRG3;H6VRG2 H6VRG2 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 401.5692 3 401.234822 1200.68264 NaN NaN NaN 0.1161 4.6585E-05 NaN NaN NaN NaN 85.587 1.8665 85.587 85.237 87.103 7.6294E-06 0 0 0 0.0063689 1 46352 61.213 38.2 1 NaN NaN 0 25769000 25769000 0 + 3762 876;877 1921 2126 6168 6168 LRSEIDNVKK 10 2 1 Unmodified _LRSEIDNVKK_ 0 0 0 2 H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRG2 H6VRG3;H6VRG2 H6VRG2 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 401.2348 3 401.234822 1200.68264 NaN NaN NaN -0.097882 -3.9274E-05 NaN NaN NaN NaN 17.859 0.23726 17.859 17.747 17.985 0 0 0 0 1.3699E-22 1 5021 117.52 68.539 1 NaN NaN 0 40591000 40591000 0 + 3763 876;877 1921 2126 6169 6169 LRSPPEALVQGR 12 0 2 Phospho (STY) _LRS(ph)PPEALVQGR_ LRS(1)PPEALVQGR LRS(47.55)PPEALVQGR 0 0 1 1 B4DN52;Q53GG0;Q9UHB6;F8VRN8 B4DN52 B4DN52 LIMA1 LIM domain and actin-binding protein 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 468.2454 3 468.244931 1401.71296 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.66 1 77.66 77.16 78.16 0 0 0 0 0.0017134 1 40536 47.548 36.938 1 3764 644 1922 2127 6170 6170 1068 LRSPPEALVQGR 12 0 2 Phospho (STY) _LRS(ph)PPEALVQGR_ LRS(1)PPEALVQGR LRS(66.67)PPEALVQGR 0 0 1 1 B4DN52;Q53GG0;Q9UHB6;F8VRN8 B4DN52 B4DN52 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 474.9177 3 468.244931 1401.71296 86911.26 0.64096 0.00030013 -0.33155 -0.00015525 0.30941 0.00014488 468.244823372365 474.916915173102 65.168 1.2394 65.168 64.469 65.709 0 355 112 5 0 0 0 0.0018506 2 40429 66.673 51.286 1 4.0887 3.5144 0 18709000 4143500 14566000 3765 644 1922 2127 6171;6172 6171 1068 LSAGFDFK 8 1 0 Phospho (STY) _LS(ph)AGFDFK_ LS(1)AGFDFK LS(48.98)AGFDFK 0 0 1 0 B7Z4V7;Q2TB10 B7Z4V7 B7Z4V7 ZNF800 Zinc finger protein 800 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 486.7196 2 482.712426 963.410299 88364.02 0.68762 0.00033192 -0.18246 -8.8075E-05 0.50516 0.00024385 482.712250419776 486.719329308694 103.85 1.2836 103.85 103.37 104.65 0 543 125 6 0 0 0 0.022705 1 67255 48.981 26.953 1 0.88462 0.61285 0 23871000 12647000 11224000 3766 705 1923 2128 6173 6173 1166 LSASTASELSPK 12 1 0 Phospho (STY) _LSASTASELS(ph)PK_ LSAST(0.001)AS(0.095)ELS(0.904)PK LS(-53.13)AS(-37.63)T(-29.78)AS(-9.8)ELS(9.8)PK 0 0 1 0 H0YF21;B3KU03;Q6NX58;D3DPS3;Q3KQU3 H0YF21 H0YF21 MAP7D1;RPRC1 MAP7 domain-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 635.799 2 635.799958 1269.58536 71844.03 0.68476 0.00043537 -0.54166 -0.00034438 0.14311 9.0986E-05 635.799171452209 639.807298985423 61.806 0.51772 61.806 61.503 62.021 0 97 32 5 0 0 0 0.0069112 1 28583 61.444 40.048 5 1.1406 1.3675 0 14555000 6671800 7883100 3767 599 1924 2129 6174 6174 986 LSDDFDSPVK 10 1 0 Phospho (STY) _LSDDFDS(ph)PVK_ LSDDFDS(1)PVK LS(-130.96)DDFDS(130.96)PVK 0 0 1 0 Q96T23;H0YER1;H0YCN2 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 605.7595 2 601.752476 1201.4904 79274.26 0.54207 0.00032619 0.17186 0.00010342 0.71393 0.00042961 601.752492993186 605.759595909294 73.3 1.7047 73.3 72.465 74.17 0 763 143 8 0 0 0 4.9014E-54 4 37546 185.3 144.77 2 0.44624 0.55201 0 280310000 189020000 91287000 3768 1188 1925 2130 6175;6176;6177;6178 6178 2341;2342 LSDDFDSPVK 10 1 0 Phospho (STY) _LSDDFDS(ph)PVK_ LSDDFDS(1)PVK LS(-40.63)DDFDS(40.63)PVK 0 0 1 0 Q96T23;H0YER1;H0YCN2 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 602.2858 2 601.752476 1201.4904 NaN NaN NaN -0.17018 -0.00010241 NaN NaN NaN NaN 74.177 0.10921 74.177 74.129 74.238 0 0 0 0 0.019257 1 37967 47.062 14.539 2 NaN NaN 0 4049800 4049800 0 3769 1188 1925 2130 6179 6179 2341;2342 LSDDFDSPVK 10 1 0 Phospho (STY) _LSDDFDS(ph)PVK_ LSDDFDS(1)PVK LS(-63.94)DDFDS(63.94)PVK 0 0 1 0 Q96T23;H0YER1;H0YCN2 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 601.7531 2 601.752476 1201.4904 78603.05 0.94532 0.00056885 0.39821 0.00023962 1.3435 0.00080847 601.752652226396 605.759810010788 72.563 2.0804 72.563 71.578 73.658 0 1183 193 9 0 0 0 3.6621E-05 4 45932 91.858 69.696 2 1.0812 0.72244 0 198790000 100410000 98386000 3770 1188 1925 2130 6180;6181;6182;6183 6181 2341;2342 LSELLPEEVEAEVK 14 1 0 Unmodified _LSELLPEEVEAEVK_ 0 0 0 0 B3KN82;Q9Y2X3;H7BZ72 B3KN82 B3KN82 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 797.431 2 792.921986 1583.82942 70774.08 1.2389 0.00098232 0.27257 0.00021613 1.5114 0.0011984 792.922336606112 796.929160121681 118.59 0.41655 118.59 118.39 118.81 0 124 36 6 0 0 0 0.032939 1 76460 34.887 8.7686 1 0.93819 0.7796 0 5564000 3041000 2523000 3771 578 1926 2131 6184 6184 LSETEDSVIIIDSSPTALK 19 1 0 Phospho (STY) _LSETEDSVIIIDS(ph)SPTALK_ LSETEDSVIIIDS(0.45)S(0.45)PT(0.099)ALK LS(-119.8)ET(-114.97)EDS(-99.55)VIIIDS(0)S(0)PT(-6.57)ALK 0 0 1 0 H0UIC2;A0A075B754;Q96QE3 H0UIC2 H0UIC2 ATAD5 ATPase family AAA domain-containing protein 5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1053.5212 2 1049.51378 2097.01301 59817.09 0.67739 0.00071093 -0.1663 -0.00017453 0.51109 0.0005364 1049.5127429777 1054.0224425804 118.4 1.0143 118.4 117.9 118.91 0 454 89 7 0 0 0 2.8328E-54 2 70965 139.08 139.08 6 1.6468 2.09 0 39238000 16031000 23208000 3772 241 1927 2132 6185;6186 6185 373;374 LSETEDSVIIIDSSPTALK 19 1 0 Phospho (STY) _LSETEDSVIIIDS(ph)SPTALK_ LSETEDSVIIIDS(0.441)S(0.441)PT(0.119)ALK LS(-63.76)ET(-63.57)EDS(-60.89)VIIIDS(0)S(0)PT(-5.7)ALK 0 0 1 0 H0UIC2;A0A075B754;Q96QE3 H0UIC2 H0UIC2 ATAD5 ATPase family AAA domain-containing protein 5 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1054.0237 2 1049.51378 2097.01301 NaN NaN NaN 0.265 0.00027813 NaN NaN NaN NaN 126.43 1.0252 126.43 126 127.02 0 0 0 0 1.415E-10 1 81589 70.802 49.962 6 NaN NaN 0 55626000 0 55626000 3773 241 1927 2132 6187 6187 373;374 LSGEHSESSTPRPR 14 0 2 Unmodified _LSGEHSESSTPRPR_ 0 0 0 1 Q7Z3K3;B4DSK8 Q7Z3K3 Q7Z3K3 POGZ Pogo transposable element with ZNF domain MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 385.9436 4 385.69321 1538.74373 96743.99 -0.2939 -0.00011335 0.078148 3.0141E-05 -0.21575 -8.3214E-05 385.693073842195 390.697434825002 66.715 0.38004 66.715 66.545 66.925 0 137 25 8 0 0 0 3.3109E-05 2 32537 78.486 62.349 1 0.63826 0.79355 0 74346000 38998000 35348000 3774 1134 1928 2133 6188;6189 6189 LSIFDANESGFESYEALPQHK 21 1 0 Phospho (STY) _LSIFDANES(ph)GFESYEALPQHK_ LSIFDANES(0.963)GFES(0.035)Y(0.002)EALPQHK LS(-39.75)IFDANES(14.39)GFES(-14.39)Y(-27.17)EALPQHK 0 0 1 0 Q59FP7;A0A024R7E3;P26358;I6L9H2 Q59FP7 Q59FP7 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 821.7026 3 821.368572 2461.08389 68317.34 0.80518 0.00066135 0.36298 0.00029814 1.1682 0.00095949 821.70317194792 824.707902842157 122.07 1.1357 122.07 121.6 122.73 7.6294E-06 367 82 7 0 0 0 1.7469E-12 2 73604 64.028 52.062 4 0.33805 0.41578 0 22494000 16335000 6158300 3775 133 1929 2134 6190;6191 6190 199 LSLDIQSPPNIGLR 14 0 1 Phospho (STY) _LSLDIQS(ph)PPNIGLR_ LSLDIQS(1)PPNIGLR LS(-121.99)LDIQS(121.99)PPNIGLR 0 0 1 0 Q9NSI6;Q5R2U8;H0Y5I9;Q5R2U6;H0Y463;H7BZR9 Q9NSI6 Q9NSI6 BRWD1;WDR9 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 801.9165 2 801.916188 1601.81782 68420.78 0.96176 0.00077125 0.14915 0.0001196 1.1109 0.00089086 801.916185261207 806.920423852307 124.19 0.72643 124.19 123.84 124.57 0 310 62 6 0 0 0 3.4837E-41 3 75285 152.99 152.99 2 0.8892 1.0936 0 26177000 13549000 12628000 3776 1218 1930 2135 6192;6193;6194 6193 2460;2461 LSLFPASPR 9 0 1 Phospho (STY) _LSLFPAS(ph)PR_ LSLFPAS(1)PR LS(-57.47)LFPAS(57.47)PR 0 0 1 0 Q53GA4 Q53GA4 Q53GA4 PHLDA2 Pleckstrin homology-like domain family A member 2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 539.2728 2 534.2679 1066.52125 NaN NaN NaN 0.034749 1.8565E-05 NaN NaN NaN NaN 112.52 0.98534 112.52 112.12 113.1 0 0 0 0 0.00020502 2 66587 77.124 42.538 2 NaN NaN 0 12596000 0 12596000 3777 1088 1931 2136 6195;6196 6195 2052 LSLFPASPR 9 0 1 Phospho (STY) _LSLFPAS(ph)PR_ LSLFPAS(1)PR LS(-42.5)LFPAS(42.5)PR 0 0 1 0 Q53GA4 Q53GA4 Q53GA4 PHLDA2 Pleckstrin homology-like domain family A member 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 534.2684 2 534.2679 1066.52125 83366.51 1.0343 0.00055259 -0.19939 -0.00010653 0.8349 0.00044606 534.267677711057 539.271848646982 118.14 0.86514 118.14 117.7 118.57 0 263 77 5 0 0 0 0.013243 2 75944 52.391 29.524 2 1.4432 1.1961 0 5541200 2452900 3088300 3778 1088 1931 2136 6197;6198 6198 2052 LSLIRSESMQR 11 0 2 Oxidation (M),2 Phospho (STY) _LSLIRS(ph)ES(ph)M(ox)QR_ LSLIRSESM(1)QR LS(0.001)LIRS(1)ES(1)MQR LSLIRSESM(43.68)QR LS(-33.04)LIRS(33.04)ES(36.14)MQR 0 1 2 1 REV__K7EMC0 REV__K7EMC0 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 758.3392 2 748.322424 1494.63029 NaN NaN NaN 4.3269 0.0032379 NaN NaN NaN NaN 67.738 0.20154 67.738 67.696 67.897 0 0 0 0 0.034885 1 33380 43.68 22.13 3 NaN NaN 0 11027000 0 11027000 + 3779 1266 1932 2137 6199 6199 366 2601;2602 LSLLSSTSK 9 1 0 Phospho (STY) _LSLLS(ph)STSK_ LSLLS(0.618)S(0.287)T(0.048)S(0.048)K LS(-90.18)LLS(3.33)S(-3.33)T(-11.1)S(-11.1)K 0 0 1 0 C9JXZ2;H7C5E5;C1K3N0;Q96SH1;A8K557;B2RAN6;P05549;Q6VUC0;Q92754;Q7Z6R9;Q92481 C9JXZ2 C9JXZ2 TFAP2A;TFAP2E;TFAP2C;TFAP2D;TFAP2B Transcription factor AP-2-alpha;Transcription factor AP-2-epsilon;Transcription factor AP-2 gamma;Transcription factor AP-2-delta;Transcription factor AP-2-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 508.2572 2 508.257198 1014.49984 87569.2 0.012009 6.1037E-06 0.53627 0.00027256 0.54828 0.00027867 508.257249965726 512.264422282245 83.543 1.4212 83.543 83.085 84.507 0 298 128 5 0 0 0 9.0798E-05 2 44822 110.39 67.141 5 0.46235 0.58628 0 35556000 22552000 13004000 3780 471 1933 2138 6200;6201 6200 819;820;821;2742 LSLLSSTSK 9 1 0 Phospho (STY) _LSLLSS(ph)TSK_ LSLLS(0.007)S(0.488)T(0.125)S(0.379)K LS(-110.04)LLS(-18.24)S(1.1)T(-5.91)S(-1.1)K 0 0 1 0 C9JXZ2;H7C5E5;C1K3N0;Q96SH1;A8K557;B2RAN6;P05549;Q6VUC0;Q92754;Q7Z6R9;Q92481 C9JXZ2 C9JXZ2 TFAP2A;TFAP2E;TFAP2C;TFAP2D;TFAP2B Transcription factor AP-2-alpha;Transcription factor AP-2-epsilon;Transcription factor AP-2 gamma;Transcription factor AP-2-delta;Transcription factor AP-2-beta MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 512.2647 2 508.257198 1014.49984 86413.14 0.51637 0.00026245 -0.056835 -2.8887E-05 0.45953 0.00023356 508.257126452854 512.264170219539 83.537 1.5155 83.537 82.637 84.152 0 429 142 5 0 0 0 3.7683E-09 4 53766 133.42 72.621 5 0.68449 0.45969 0 26992000 15964000 11027000 3781 471 1933 2138 6202;6203;6204;6205 6205 819;820;821;2742 LSLLSSTSK 9 1 0 Phospho (STY) _LSLLS(ph)STSK_ LSLLS(0.25)S(0.25)T(0.25)S(0.25)K LS(-62.84)LLS(0)S(0)T(0)S(0)K 0 0 1 0 C9JXZ2;H7C5E5;C1K3N0;Q96SH1;A8K557;B2RAN6;P05549;Q6VUC0;Q92754;Q7Z6R9;Q92481 C9JXZ2 C9JXZ2 TFAP2A;TFAP2E;TFAP2C;TFAP2D;TFAP2B Transcription factor AP-2-alpha;Transcription factor AP-2-epsilon;Transcription factor AP-2 gamma;Transcription factor AP-2-delta;Transcription factor AP-2-beta MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 508.2573 2 508.257198 1014.49984 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.049 1 82.049 81.549 82.549 0 0 0 0 0.0022726 1 52562 70.942 15.392 5 3782 471 1933 2138 6206 6206 819;820;821;2742 LSLVIRSPSLLQSGAK 16 1 1 Phospho (STY) _LSLVIRS(ph)PSLLQSGAK_ LSLVIRS(0.976)PS(0.023)LLQS(0.001)GAK LS(-40.71)LVIRS(16.35)PS(-16.35)LLQS(-30.61)GAK 0 0 1 1 Q9BQG0;I3L1L3;B4DE42;I3L2H8 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 589.6685 3 583.660522 1747.95974 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.3 1 117.3 116.8 117.8 0 0 0 0 1.0626E-07 1 75591 77.631 51.483 4 3783 1192 1934 2139 6207 6207 2360 LSPATPTSEGPK 12 1 0 Phospho (STY) _LS(ph)PATPTSEGPK_ LS(0.996)PAT(0.003)PTSEGPK LS(24.91)PAT(-24.91)PT(-37.89)S(-37.89)EGPK 0 0 1 0 Q8N1G0;F8WCX2 Q8N1G0 Q8N1G0 ZNF687 Zinc finger protein 687 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 636.8015 2 632.794675 1263.5748 77447.45 0.54338 0.00034385 0.12687 8.0282E-05 0.67025 0.00042413 632.794654923467 636.801881825619 50.564 1.3984 50.564 49.977 51.376 3.8147E-06 595 115 8 0 0 0 0.016072 1 20145 41.684 29.157 4 0.86663 1.0863 0 59115000 30723000 28392000 3784 1150 1935 2140 6208 6208 2218 LSPATPTSEGPK 12 1 0 Phospho (STY) _LS(ph)PATPTSEGPK_ LS(0.999)PAT(0.001)PTSEGPK LS(30.32)PAT(-30.32)PT(-42.07)S(-42.07)EGPK 0 0 1 0 Q8N1G0;F8WCX2 Q8N1G0 Q8N1G0 ZNF687 Zinc finger protein 687 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 632.7928 2 632.794675 1263.5748 76054.66 1.1088 0.00070164 -0.79202 -0.00050119 0.31678 0.00020045 632.793806561491 636.801253815384 43.021 1.1099 43.021 42.712 43.822 0 415 95 7 0 0 0 0.010569 1 25295 46.985 33.582 4 2.3601 1.5461 0 50582000 13816000 36766000 3785 1150 1935 2140 6209 6209 2218 LSPENNQVLTK 11 1 0 Phospho (STY) _LS(ph)PENNQVLTK_ LS(1)PENNQVLTK LS(34.5)PENNQVLT(-34.5)K 0 0 1 0 Q16514 Q16514 Q16514 TAF12 Transcription initiation factor TFIID subunit 12 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 666.3303 2 661.821225 1321.6279 75737.08 0.80871 0.00053522 -0.21558 -0.00014267 0.59313 0.00039255 661.821278076617 665.828015988475 62.267 0.99275 62.267 61.945 62.938 0 259 75 6 0 0 0 0.020858 1 28999 41.08 12.681 2 0.6301 0.77375 0 21737000 11394000 10343000 3786 1079 1936 2141 6210 6210 2035 LSPNPPNLTK 10 1 0 Phospho (STY) _LS(ph)PNPPNLTK_ LS(1)PNPPNLTK LS(114.43)PNPPNLT(-114.43)K 0 0 1 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;B3KNW7;B4E0F1;B4DSI8 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 584.7965 2 580.789196 1159.56384 78309.69 0.64624 0.00037533 -0.24547 -0.00014257 0.40077 0.00023276 580.789110034723 584.795959538445 72.397 1.9345 72.397 71.217 73.152 0 927 169 9 0 0 0 7.1214E-11 3 36748 136.82 94.022 2 0.75501 0.93218 0 682460000 395990000 286470000 3787 434 1937 2142 6211;6212;6213 6213 753 LSPPVASGGIPHQSPPTK 18 1 0 2 Phospho (STY) _LS(ph)PPVASGGIPHQS(ph)PPTK_ LS(1)PPVASGGIPHQS(0.864)PPT(0.136)K LS(37.69)PPVAS(-37.69)GGIPHQS(8.02)PPT(-8.02)K 0 0 2 0 Q96T58 Q96T58 Q96T58 SPEN Msx2-interacting protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 965.4495 2 965.447198 1928.87984 62926.23 0.34606 0.0003341 0.081884 7.9055E-05 0.42795 0.00041316 965.948982686197 969.454303912961 85.123 0.70388 85.123 84.78 85.484 0 300 68 6 0 0 0 1.4954E-06 1 45825 68.639 59.91 6 0.72477 0.91538 0 46696000 23922000 22774000 3788 1189 1938 2143 6214 6214 2351;2352 LSPPYSSPQEFAQDVGR 17 0 1 Phospho (STY) _LS(ph)PPYSSPQEFAQDVGR_ LS(1)PPYSSPQEFAQDVGR LS(49.42)PPY(-60.23)S(-49.42)S(-68.07)PQEFAQDVGR 0 0 1 0 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 984.4431 2 979.438212 1956.86187 61397.37 0.44236 0.00043326 -0.0010153 -9.9443E-07 0.44134 0.00043227 979.939607519551 984.442517468305 109.92 1.0408 109.92 109.4 110.45 0 560 82 10 0 0 0 6.9998E-17 2 65013 108.77 100.04 4 2.2199 2.8069 0 221830000 68918000 152910000 3789 542 1939 2144 6215;6216 6216 901;902 LSPPYSSPQEFAQDVGR 17 0 1 2 Phospho (STY) _LS(ph)PPYS(ph)SPQEFAQDVGR_ LS(0.983)PPY(0.121)S(0.473)S(0.423)PQEFAQDVGR LS(18.47)PPY(-6.34)S(0.49)S(-0.49)PQEFAQDVGR 0 0 2 0 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1019.9236 2 1019.42138 2036.8282 60259.25 0.35244 0.00035928 0.36589 0.00037299 0.71833 0.00073228 1019.42156666465 1024.42590296165 113.93 0.96593 113.93 113.44 114.4 0 563 85 9 0 0 0 0.00014529 1 67501 48.547 42.599 6 1.9547 2.4726 0 285070000 90894000 194180000 3790 542 1939 2145 6217 6217 901;902 LSPQQAFPR 9 0 1 Phospho (STY) _LS(ph)PQQAFPR_ LS(1)PQQAFPR LS(40.27)PQQAFPR 0 0 1 0 G3V3R5;A0A1B0GTT1;A0A1B0GVM0;Q9BUH8 G3V3R5 G3V3R5 BEGAIN Brain-enriched guanylate kinase-associated protein MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 567.2739 2 562.268431 1122.52231 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.192 1 81.192 80.692 81.692 0 0 0 0 0.023041 1 51968 40.268 14.531 1 3791 384 1940 2146 6218 6218 646 LSPSASPPR 9 0 1 Phospho (STY) _LSPSAS(ph)PPR_ LSPS(0.052)AS(0.948)PPR LS(-42.13)PS(-12.65)AS(12.65)PPR 0 0 1 0 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3;E9PCT1;M0R088 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 496.233 2 496.234057 990.453561 87212.7 0.4538 0.00022519 0.25327 0.00012568 0.70707 0.00035087 496.234081562733 501.238245204821 35.733 1.0374 35.733 35.172 36.21 0 339 83 6 0 0 0 0.020132 1 19773 45.879 27.844 3 0.70958 0.52938 0 21844000 11834000 10010000 3792 353 1941 2147 6219 6219 552;553;554 LSPSPTTEDPR 11 0 1 Phospho (STY) _LS(ph)PSPTTEDPR_ LS(0.98)PS(0.02)PTTEDPR LS(16.96)PS(-16.96)PT(-34.46)T(-34.46)EDPR 0 0 1 0 D6W5A2;E7EV10;Q9BTC8;Q53QZ9;E7EQY4 D6W5A2 D6W5A2 MTA3;tmp_locus_6 Metastasis-associated protein MTA3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 640.2822 2 640.281932 1278.54931 76661.45 1.0031 0.0006423 -0.52835 -0.0003383 0.47479 0.000304 640.281895219828 645.284910797203 48.281 0.83768 48.281 47.872 48.71 -3.8147E-06 223 55 6 0 0 0 0.017432 1 18831 42.976 34.247 4 0.58922 0.65101 0 8211300 5321700 2889600 3793 778 1942 2148 6220 6220 1318;1319 LSPTQLR 7 0 1 Phospho (STY) _LS(ph)PTQLR_ LS(0.996)PT(0.004)QLR LS(23.57)PT(-23.57)QLR 0 0 1 0 Q9UNS1;B3KMU4;B4DL70 Q9UNS1 Q9UNS1 TIMELESS Protein timeless homolog MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 452.7305 2 447.725868 893.437182 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.087 1 63.087 62.587 63.587 0 0 0 0 0.02747 1 29632 47.603 8.2982 2 3794 1242 1943 2149 6221 6221 2546 LSRGSISSTSEVHSPPNVGLR 21 0 2 3 Phospho (STY) _LS(ph)RGS(ph)ISSTSEVHS(ph)PPNVGLR_ LS(0.616)RGS(0.42)IS(0.243)S(0.25)T(0.237)S(0.237)EVHS(0.997)PPNVGLR LS(7.44)RGS(5.33)IS(-5.33)S(-5.33)T(-6.02)S(-6.02)EVHS(29.36)PPNVGLR 0 0 3 1 Q8WWQ0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 807.6868 3 807.351788 2419.03353 67812.73 0.68175 0.00055041 0.27123 0.00021898 0.95298 0.00076939 807.686372023773 814.024236487682 88.313 1.2249 88.313 87.727 88.952 0 646 109 8 0 0 0 1.3308E-06 1 48393 44.365 35.784 35 0.44788 0.55822 0 134830000 96790000 38039000 3795 1167 1944 2150 6222 6222 2266;2267;2270 LSSAGPRSPYCK 12 1 1 Phospho (STY) _LSSAGPRS(ph)PYCK_ LS(0.016)S(0.216)AGPRS(0.766)PY(0.002)CK LS(-16.82)S(-5.5)AGPRS(5.5)PY(-26.5)CK 0 0 1 1 A0A024R9G7;Q6PL18 A0A024R9G7 A0A024R9G7 ATAD2 ATPase family AAA domain-containing protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 710.8244 2 701.812877 1401.6112 71932.88 0.46919 0.00032929 0.73829 0.00051814 1.2075 0.00084743 702.315308591168 710.82423876244 22.223 0.68964 22.223 21.942 22.632 0 125 36 7 0 0 0 0.0078258 1 8881 48.527 26.534 4 0.57381 0.43925 0 24402000 14831000 9570500 3796 166 1945 2151 6223 6223 258 LSSEDEEEDEAEDDQSEASGKK 22 2 0 Phospho (STY) _LSS(ph)EDEEEDEAEDDQSEASGKK_ LS(0.066)S(0.934)EDEEEDEAEDDQSEASGKK LS(-11.52)S(11.52)EDEEEDEAEDDQS(-54.37)EAS(-63.44)GKK 0 0 1 1 Q8NEJ9;G3V4G1 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 836.6553 3 836.32034 2505.93919 66941.66 0.77634 0.00064927 -0.085178 -7.1236E-05 0.69117 0.00057804 836.654557136312 841.662974784871 43.999 1.1388 43.999 43.444 44.583 3.8147E-06 580 84 11 0 0 0 2.7328E-15 2 16121 75.224 75.224 4 1.1095 1.3045 0 23577000 9918700 13658000 3797 1161 1946 2152 6224;6225 6224 2240 LSSEDEEEDEAEDDQSEASGKK 22 2 0 Phospho (STY) _LSS(ph)EDEEEDEAEDDQSEASGKK_ LS(0.003)S(0.997)EDEEEDEAEDDQSEASGKK LS(-25.92)S(25.92)EDEEEDEAEDDQS(-63.07)EAS(-68.6)GKK 0 0 1 1 Q8NEJ9;G3V4G1 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 836.6554 3 836.32034 2505.93919 66648.32 0.91345 0.00076393 -0.13473 -0.00011267 0.77872 0.00065126 836.654617188564 841.997273770092 27.073 0.62868 27.073 26.88 27.509 0 330 41 11 0 0 0 1.1686E-16 1 13090 81.763 81.763 4 1.451 1.084 0 110070000 40474000 69596000 3798 1161 1946 2152 6226 6226 2240 LSSLWWAPLSR 11 0 1 Phospho (STY) _LSS(ph)LWWAPLSR_ LS(0.083)S(0.906)LWWAPLS(0.01)R LS(-10.37)S(10.37)LWWAPLS(-19.39)R 0 0 1 0 REV__B4E073 REV__B4E073 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 703.3526 2 698.34467 1394.67479 73136.3 1.1365 0.00079366 4.0216 0.0028084 5.1581 0.0036021 698.347371161233 703.351550952455 99.402 1.4601 99.402 98.632 100.09 -7.6294E-06 833 141 8 0 0 0 0.011445 1 63665 50.284 21.212 3 1.4158 0.96523 0 52301000 21141000 31160000 + 3799 1268 1947 2153 6227 6227 2603 LSSLWWAPLSR 11 0 1 Phospho (STY) _LSS(ph)LWWAPLSR_ LS(0.018)S(0.979)LWWAPLS(0.003)R LS(-17.35)S(17.35)LWWAPLS(-24.76)R 0 0 1 0 REV__B4E073 REV__B4E073 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 703.8535 2 698.34467 1394.67479 NaN NaN NaN 3.7552 0.0026225 NaN NaN NaN NaN 100.73 1.0298 100.73 100.12 101.15 0 0 0 0 0.009256 1 64594 55.314 23.472 3 NaN NaN 0 11479000 0 11479000 + 3800 1268 1947 2153 6228 6228 2603 LSSPATLNSR 10 0 1 Unmodified _LSSPATLNSR_ 0 0 0 0 CON__P00761 CON__P00761 CON__P00761 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 523.2855 2 523.285463 1044.55637 NaN NaN NaN 0.06537 3.4207E-05 NaN NaN NaN NaN 60.729 0.89398 60.729 60.29 61.184 -3.8147E-06 0 0 0 0.0079778 1 27588 73.985 36.891 1 NaN NaN 0 13099000 13099000 0 + 3801 750 1948 2154 6229 6229 LSSPVLHR 8 0 1 Phospho (STY) _LSS(ph)PVLHR_ LSS(1)PVLHR LS(-49.88)S(49.88)PVLHR 0 0 1 0 B3KSQ7;Q16643;D6R9W4;D6RCR4 B3KSQ7 B3KSQ7 DBN1 Drebrin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 499.7566 2 494.752417 987.490281 86552.17 0.61414 0.00030385 -0.010375 -5.133E-06 0.60377 0.00029871 494.752403357682 499.756403102343 60.73 0.83866 60.73 60.533 61.371 0 285 62 7 0 0 0 0.0004715 2 27673 123.86 83.508 2 0.91771 1.1587 0 98076000 50797000 47279000 3802 598 1949 2155 6230;6231 6231 980;981 LSSPVLHR 8 0 1 Phospho (STY) _LSS(ph)PVLHR_ LSS(1)PVLHR LS(-40.28)S(40.28)PVLHR 0 0 1 0 B3KSQ7;Q16643;D6R9W4;D6RCR4 B3KSQ7 B3KSQ7 DBN1 Drebrin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 494.7527 2 494.752417 987.490281 86047.53 0.53797 0.00026616 0.40854 0.00020213 0.94651 0.00046829 494.752570249101 499.756733469689 32.212 0.94009 32.212 31.938 32.878 0 286 69 8 0 0 0 0.0038837 1 17269 94.692 56.605 2 2.3565 1.5802 0 112340000 23669000 88675000 3803 598 1949 2155 6232 6232 980;981 LSSPVLHR 8 0 1 Phospho (STY) _LS(ph)SPVLHR_ LS(0.5)S(0.5)PVLHR LS(0)S(0)PVLHR 0 0 1 0 B3KSQ7;Q16643;D6R9W4;D6RCR4 B3KSQ7 B3KSQ7 DBN1 Drebrin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 330.1706 3 330.170703 987.490281 105239.1 0.42729 0.00014108 -0.012426 -4.1026E-06 0.41487 0.00013698 330.170633797456 333.506723288458 32.212 0.60964 32.212 31.953 32.562 0 211 48 7 0 0 0 0.012765 1 17276 44.203 25.472 2 2.3918 1.6763 0 34820000 9428200 25392000 3804 598 1949 2155 6233 6233 980;981 LSTPSTGGSVDIISVK 16 1 0 Phospho (STY) _LS(ph)TPSTGGSVDIISVK_ LS(0.555)T(0.442)PS(0.002)T(0.001)GGSVDIISVK LS(0.99)T(-0.99)PS(-24.87)T(-29.31)GGS(-37.72)VDIIS(-53.12)VK 0 0 1 0 E7ETD6;Q12830;F5GXF5 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 820.9121 2 820.910768 1639.80698 67868.54 1.0704 0.00087868 -0.39303 -0.00032264 0.67735 0.00055604 820.910086654421 824.917778671764 104.97 0.74124 104.97 104.57 105.31 0 261 50 7 0 0 0 0.00011929 2 60598 58.098 58.098 6 0.54647 0.69245 0 32771000 19100000 13671000 3805 791 1950 2156 6234;6235 6234 1337;2821 LSTPSTGGSVDIISVK 16 1 0 Phospho (STY) _LST(ph)PSTGGSVDIISVK_ LS(0.178)T(0.818)PS(0.003)T(0.001)GGSVDIISVK LS(-6.63)T(6.63)PS(-24.35)T(-28.98)GGS(-41.7)VDIIS(-51.47)VK 0 0 1 0 E7ETD6;Q12830;F5GXF5 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 820.9122 2 820.910768 1639.80698 68000.09 1.1824 0.00097061 -0.20631 -0.00016937 0.97604 0.00080124 820.910730796586 824.917625982521 110.89 0.88736 110.89 110.45 111.34 0 472 83 8 0 0 0 0.00078476 2 71289 62.528 49.124 6 1.412 0.93222 0 30081000 12512000 17570000 3806 791 1950 2156 6236;6237 6237 1337;2821 LSVLIHNSDEHK 12 1 0 Unmodified _LSVLIHNSDEHK_ 0 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JWF0;C9IYK2;C9JJ64;C9JVD8;C9J578;C9J9E4 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 464.5809 3 464.580769 1390.72048 88150.61 0.36529 0.00016971 0.54893 0.00025502 0.91422 0.00042473 464.580662693211 467.252167134484 108.68 1.4628 108.68 107.96 109.42 0 487 116 7 0 0 0 0.00017538 4 64010 84.352 84.352 1 0.87882 1.0988 0 64675000 33873000 30802000 3807 1220 1951 2157 6238;6239;6240;6241 6241 LSVPTSDEEDEVPAPK 16 1 0 Phospho (STY) _LSVPTS(ph)DEEDEVPAPK_ LSVPT(0.026)S(0.974)DEEDEVPAPK LS(-51.55)VPT(-15.82)S(15.82)DEEDEVPAPK 0 0 1 0 Q5STZ8;B4DNU2;Q8NE71;Q2L6I2;F5GYK6;A0PJ72 Q5STZ8 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 896.8984 2 896.898054 1791.78156 64753.78 0.72789 0.00065284 0.057916 5.1945E-05 0.78581 0.00070479 896.897980149135 900.905005815298 87.879 1.6899 87.879 87.064 88.754 0 958 154 8 0 0 0 6.3684E-16 4 47943 103.39 88.415 3 0.37061 0.4582 0 362590000 257100000 105480000 3808 648 1952 2158 6242;6243;6244;6245 6244 1078;2789 LSVPTSDEEDEVPAPK 16 1 0 Phospho (STY) _LSVPTS(ph)DEEDEVPAPK_ LSVPT(0.027)S(0.973)DEEDEVPAPK LS(-52.92)VPT(-15.53)S(15.53)DEEDEVPAPK 0 0 1 0 Q5STZ8;B4DNU2;Q8NE71;Q2L6I2;F5GYK6;A0PJ72 Q5STZ8 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 896.8987 2 896.898054 1791.78156 64205.95 0.89625 0.00080384 0.37566 0.00033693 1.2719 0.0011408 896.898329348972 900.90525677366 93.501 1.125 93.501 93.006 94.131 0 751 109 10 0 0 0 1.0009E-11 1 60078 94.461 79.488 3 0.44825 0.29932 0 292220000 199180000 93044000 3809 648 1952 2158 6246 6246 1078;2789 LSVPTSDEEDEVPAPKPR 18 1 1 Phospho (STY) _LSVPTS(ph)DEEDEVPAPKPR_ LSVPT(0.041)S(0.959)DEEDEVPAPKPR LS(-51.2)VPT(-13.66)S(13.66)DEEDEVPAPKPR 0 0 1 1 Q5STZ8;B4DNU2;Q8NE71;Q2L6I2;F5GYK6;A0PJ72 Q5STZ8 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 682.6531 3 682.65242 2044.93543 72703.24 0.85161 0.00058136 -0.041892 -2.8598E-05 0.80972 0.00055276 682.652451250716 688.659811059749 83.929 1.2326 83.929 83.441 84.674 0 773 111 10 0 0 0 7.1583E-11 2 53712 84.573 73.757 3 0.4582 0.35398 0 156160000 111400000 44766000 3810 648 1953 2159 6247;6248 6247 1078;2789 LSVQSNPSPQLR 12 0 1 Phospho (STY) _LSVQSNPS(ph)PQLR_ LSVQS(0.004)NPS(0.996)PQLR LS(-92.47)VQS(-23.81)NPS(23.81)PQLR 0 0 1 0 Q0D2N5;E9PBY7;E9PQ61;B4DLG2;O75152;B4DYM8 Q0D2N5 Q0D2N5 ZC3H11A Zinc finger CCCH domain-containing protein 11A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 703.3463 2 703.345398 1404.67624 72992.73 0.65376 0.00045982 0.33553 0.00023599 0.98929 0.00069581 703.345813297441 708.349933778054 68.32 0.90269 68.32 67.872 68.775 0 325 81 6 0 0 0 1.0946E-15 2 33680 119.88 98.417 3 1.3038 1.6385 0 42640000 16333000 26306000 3811 638 1954 2160 6249;6250 6250 1054 LSVQSNPSPQLR 12 0 1 Phospho (STY) _LSVQSNPS(ph)PQLR_ LSVQS(0.027)NPS(0.973)PQLR LS(-36.23)VQS(-15.57)NPS(15.57)PQLR 0 0 1 0 Q0D2N5;E9PBY7;E9PQ61;B4DLG2;O75152;B4DYM8 Q0D2N5 Q0D2N5 ZC3H11A Zinc finger CCCH domain-containing protein 11A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 708.351 2 703.345398 1404.67624 71954.68 1.1207 0.00078827 0.30733 0.00021616 1.4281 0.0010044 703.345219257198 708.349578506057 66.769 1.5273 66.769 66.096 67.624 0 676 140 8 0 0 0 0.011172 1 41505 45.115 35.334 3 2.8667 1.9606 0 49917000 14150000 35767000 3812 638 1954 2160 6251 6251 1054 LTFDSSFSPNTGK 13 1 0 Phospho (STY) _LTFDSSFS(ph)PNTGK_ LTFDSS(0.003)FS(0.994)PNT(0.003)GK LT(-123.9)FDS(-37.51)S(-25.08)FS(25.08)PNT(-25.47)GK 0 0 1 0 A0A1L1UHR1;P21796;C9JI87 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 740.8218 2 740.821422 1479.62829 70530.46 1.0691 0.00079198 0.39247 0.00029075 1.4615 0.0010827 740.821562971669 744.828751317978 95.276 1.3761 95.276 94.665 96.041 0 649 118 8 0 0 0 8.6898E-26 3 53736 142.1 121.9 5 1.7747 2.196 0 243010000 79764000 163240000 3813 390 1955 2161 6252;6253;6254 6254 662;663 LTFDSSFSPNTGK 13 1 0 Phospho (STY) _LTFDSSFS(ph)PNTGK_ LTFDSS(0.014)FS(0.968)PNT(0.017)GK LT(-147.02)FDS(-39.98)S(-18.27)FS(17.45)PNT(-17.45)GK 0 0 1 0 A0A1L1UHR1;P21796;C9JI87 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 744.8295 2 740.821422 1479.62829 70584.66 1.1744 0.00087005 -0.024527 -1.817E-05 1.1499 0.00085188 740.821286706189 744.828409508719 99.74 2.0247 99.74 98.566 100.59 0 758 192 6 0 0 0 4.99E-66 4 63899 177.93 150.01 5 2.4045 1.5638 0 38841000 11812000 27029000 3814 390 1955 2161 6255;6256;6257;6258 6256 662;663 LTFDSSFSPNTGKK 14 2 0 Phospho (STY) _LTFDSSFS(ph)PNTGKK_ LTFDS(0.031)S(0.031)FS(0.726)PNT(0.212)GKK LT(-37.72)FDS(-13.71)S(-13.71)FS(5.35)PNT(-5.35)GKK 0 0 1 1 A0A1L1UHR1;P21796;C9JI87 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 804.8705 2 804.868903 1607.72325 NaN NaN NaN 0.3176 0.00025563 NaN NaN NaN NaN 88.914 0.30098 88.914 88.754 89.055 0 0 0 0 0.0098011 1 48666 43.69 27.553 5 NaN NaN 0 6101000 6101000 0 3815 390 1956 2162 6259 6259 662;663 LTFDSSFSPNTGKK 14 2 0 Phospho (STY) _LTFDSSFS(ph)PNTGKK_ LTFDS(0.007)S(0.179)FS(0.688)PNT(0.127)GKK LT(-58.7)FDS(-20.22)S(-5.84)FS(5.84)PNT(-7.35)GKK 0 0 1 1 A0A1L1UHR1;P21796;C9JI87 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 804.8687 2 804.868903 1607.72325 NaN NaN NaN 0.32274 0.00025977 NaN NaN NaN NaN 89.382 0.45719 89.382 89.227 89.684 -7.6294E-06 0 0 0 0.00087462 1 48903 64.675 43.615 5 NaN NaN 0 10682000 10682000 0 3816 390 1956 2162 6260 6260 662;663 LTFDSSFSPNTGKK 14 2 0 Phospho (STY) _LTFDSS(ph)FSPNTGKK_ LTFDS(0.239)S(0.557)FS(0.163)PNT(0.041)GKK LT(-53.04)FDS(-3.67)S(3.67)FS(-5.32)PNT(-11.34)GKK 0 0 1 1 A0A1L1UHR1;P21796;C9JI87 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 804.8704 2 804.868903 1607.72325 67596.82 1.1138 0.00089643 -0.10364 -8.3417E-05 1.0101 0.00081301 804.868917995385 812.882493136065 81.461 1.5246 81.461 81.061 82.586 0 515 139 6 0 0 0 0.0011289 1 52060 58.885 46.259 5 2.5634 1.9978 0 38701000 10923000 27778000 3817 390 1956 2162 6261 6261 662;663 LTFDSSFSPNTGKK 14 2 0 Phospho (STY) _LTFDSSFS(ph)PNTGKK_ LTFDS(0.022)S(0.076)FS(0.696)PNT(0.206)GKK LT(-42.96)FDS(-14.94)S(-9.61)FS(5.3)PNT(-5.3)GKK 0 0 1 1 A0A1L1UHR1;P21796;C9JI87 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 542.2582 3 536.915028 1607.72325 82831.95 0.90409 0.00048542 -0.18597 -9.9848E-05 0.71813 0.00038557 536.914890422054 542.257675205727 81.407 1.2046 81.407 80.999 82.204 0 564 112 8 0 0 0 0.00073174 1 52436 52.52 35.031 5 2.6676 2.0897 0 36577000 9012200 27565000 3818 390 1956 2162 6262 6262 662;663 LTFDTTFSPNTGK 13 1 0 Phospho (STY) _LTFDTTFS(ph)PNTGK_ LTFDTTFS(1)PNTGK LT(-180.77)FDT(-78.69)T(-44.49)FS(35.73)PNT(-35.73)GK 0 0 1 0 Q5JSD2;Q5JSD1;B4DKM5;A0A0A0MR02;A0A024QZT0;A0A024QZN9;P45880 Q5JSD2 Q5JSD2 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 758.847 2 754.837072 1507.65959 68740.85 1.3671 0.001032 0.061406 4.6351E-05 1.4285 0.0010783 754.836988370679 758.844171187779 102.89 1.5258 102.89 102.28 103.81 0 642 110 8 0 0 0 2.1724E-149 3 59542 228.38 203.04 5 2.5164 3.1158 0 182290000 53696000 128600000 3819 18 1957 2163 6263;6264;6265 6265 21 LTFDTTFSPNTGK 13 1 0 Phospho (STY) _LTFDTTFS(ph)PNTGK_ LTFDT(0.007)T(0.03)FS(0.763)PNT(0.201)GK LT(-66.23)FDT(-20.63)T(-14.07)FS(5.8)PNT(-5.8)GK 0 0 1 0 Q5JSD2;Q5JSD1;B4DKM5;A0A0A0MR02;A0A024QZT0;A0A024QZN9;P45880 Q5JSD2 Q5JSD2 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 759.3458 2 754.837072 1507.65959 69776.26 1.1129 0.00084007 -0.041715 -3.1488E-05 1.0712 0.00080859 754.837036526253 758.844252499707 108.36 1.3094 108.36 107.68 108.99 0 700 128 8 0 0 0 0.00077997 3 70022 72.898 50.666 5 4.1466 2.7495 0 75283000 13859000 61424000 3820 18 1957 2163 6266;6267;6268 6268 21 LTFDTTFSPNTGKK 14 2 0 Phospho (STY) _LTFDTTFS(ph)PNTGKK_ LTFDT(0.001)T(0.05)FS(0.913)PNT(0.035)GKK LT(-64.03)FDT(-27.91)T(-12.6)FS(12.6)PNT(-14.18)GKK 0 0 1 1 Q5JSD2;Q5JSD1;B4DKM5;A0A0A0MR02;A0A024QZT0;A0A024QZN9;P45880 Q5JSD2 Q5JSD2 VDAC2 Voltage-dependent anion-selective channel protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 826.8996 2 818.884553 1635.75455 68020.55 1.1507 0.00094226 0.69802 0.0005716 1.8487 0.0015139 819.386334196435 826.89891956707 90.865 1.4081 90.865 90.047 91.455 7.6294E-06 512 135 9 0 0 0 4.1498E-05 2 58413 78.069 64.656 5 4.546 3.6408 0 28884000 6063600 22820000 3821 18 1958 2164 6269;6270 6269 21 LTLLQVASR 9 0 1 Phospho (STY) _LTLLQVAS(ph)R_ LTLLQVAS(1)R LT(-52.44)LLQVAS(52.44)R 0 0 1 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 545.799 2 540.794282 1079.57401 84122.91 0.59487 0.0003217 -0.20702 -0.00011196 0.38785 0.00020975 540.794044421729 545.79838552326 106.61 1.0837 106.61 105.93 107.01 0 301 80 5 0 0 0 0.0073365 2 61699 61.932 26.781 2 1.2086 1.486 0 27719000 13957000 13762000 3822 944 1959 2165 6271;6272 6271 1632 LTLSALLDGK 10 1 0 Unmodified _LTLSALLDGK_ 0 0 0 0 A0A1L1UHR1;P21796;B4DEI3;B3KTS5 A0A1L1UHR1 A0A1L1UHR1 VDAC1 Voltage-dependent anion-selective channel protein 1 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 519.8182 2 515.810782 1029.60701 NaN NaN NaN NaN NaN NaN NaN NaN NaN 122.83 1 122.83 122.33 123.33 7.6294E-06 0 0 0 0.028517 1 79410 42.395 0 1 3823 390 1960 2166 6273 6273 LTPEEEEILNK 11 1 0 Unmodified _LTPEEEEILNK_ 0 0 0 0 Q5JR95;Q5JR94;P62241;Q9BS10 Q5JR95 Q5JR95 RPS8 40S ribosomal protein S8 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 657.8434 2 657.843007 1313.67146 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.219 1 83.219 82.719 83.719 0 0 0 0 0.00041796 1 44608 74.464 54.135 1 3824 1016 1961 2167 6274 6274 LTPEEEEILNK 11 1 0 Phospho (STY) _LT(ph)PEEEEILNK_ LT(1)PEEEEILNK LT(67.46)PEEEEILNK 0 0 1 0 Q5JR95;Q5JR94;P62241;Q9BS10 Q5JR95 Q5JR95 RPS8 40S ribosomal protein S8 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 697.827 2 697.826173 1393.63779 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.294 1 84.294 83.794 84.794 0 0 0 0 0.0044906 1 45357 67.456 50.245 1 3825 1016 1961 2168 6275 6275 2902 LTPSPDIIVLSDNEASSPR 19 0 1 Phospho (STY) _LTPSPDIIVLSDNEAS(ph)SPR_ LTPSPDIIVLS(0.029)DNEAS(0.485)S(0.485)PR LT(-58.61)PS(-48.66)PDIIVLS(-12.2)DNEAS(0)S(0)PR 0 0 1 0 A0A0U1RRM1;B3KSZ4;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1051.0087 2 1046.00392 2089.99328 59578.76 0.77974 0.00081561 -0.26479 -0.00027697 0.51495 0.00053864 1046.50502019992 1051.00792196962 117.96 1.1802 117.96 117.56 118.74 0 775 102 11 0 0 0 7.1382E-08 2 70615 63.691 63.691 5 0.78418 0.99286 0 473820000 268580000 205240000 3826 369 1962 2169 6276;6277 6276 584;585;586;587;2696 LTPSPDIIVLSDNEASSPR 19 0 1 Phospho (STY) _LTPSPDIIVLSDNEAS(ph)SPR_ LTPSPDIIVLSDNEAS(0.644)S(0.356)PR LT(-144.38)PS(-134.67)PDIIVLS(-33.63)DNEAS(2.58)S(-2.58)PR 0 0 1 0 A0A0U1RRM1;B3KSZ4;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1051.0098 2 1046.00392 2089.99328 59657.13 0.63756 0.00066689 0.40525 0.0004239 1.0428 0.0010908 1046.50614433256 1051.00850318609 125.67 1.379 125.67 125.23 126.61 0 946 127 14 0 0 0 8.5923E-63 2 81251 149.36 149.36 5 2.2031 1.4258 0 656440000 200680000 455760000 3827 369 1962 2169 6278;6279 6279 584;585;586;587;2696 LTPSPDIIVLSDNEASSPR 19 0 1 2 Phospho (STY) _LTPSPDIIVLS(ph)DNEAS(ph)SPR_ LTPSPDIIVLS(1)DNEAS(0.559)S(0.441)PR LT(-68.19)PS(-58.28)PDIIVLS(34.67)DNEAS(1.02)S(-1.02)PR 0 0 2 0 A0A0U1RRM1;B3KSZ4;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1086.4885 2 1085.98708 2169.95961 57675.97 0.29614 0.0003216 0.18774 0.00020389 0.48388 0.00052549 1085.98728763534 1090.99155192134 121.76 0.98074 121.76 121.27 122.25 -7.6294E-06 573 74 11 0 0 0 2.2642E-14 2 73808 90.581 81.298 10 0.54845 0.69359 0 244190000 158550000 85648000 3828 369 1962 2170 6280;6281 6281 584;585;586;587;2696 LTPSPDIIVLSDNEASSPR 19 0 1 2 Phospho (STY) _LTPS(ph)PDIIVLSDNEAS(ph)SPR_ LT(0.007)PS(0.993)PDIIVLS(0.296)DNEAS(0.377)S(0.327)PR LT(-21.66)PS(21.66)PDIIVLS(-1.04)DNEAS(0.62)S(-0.62)PR 0 0 2 0 A0A0U1RRM1;B3KSZ4;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1085.9871 2 1085.98708 2169.95961 58592.04 0.44473 0.00048297 0.022137 2.4041E-05 0.46686 0.00050701 1086.48866457166 1090.99131461852 123.86 0.88715 123.86 123.44 124.33 7.6294E-06 589 77 11 0 0 0 2.538E-08 2 74874 68.49 68.49 10 0.80282 1.0143 0 142190000 80428000 61766000 3829 369 1962 2170 6282;6283 6282 584;585;586;587;2696 LTPSPDIIVLSDNEASSPR 19 0 1 2 Phospho (STY) _LTPS(ph)PDIIVLSDNEAS(ph)SPR_ LT(0.016)PS(0.984)PDIIVLS(0.022)DNEAS(0.509)S(0.469)PR LT(-17)PS(17)PDIIVLS(-13.49)DNEAS(0.32)S(-0.32)PR 0 0 2 0 A0A0U1RRM1;B3KSZ4;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1091.4927 2 1085.98708 2169.95961 57827.68 0.69717 0.00075712 -0.63188 -0.00068621 0.065292 7.0907E-05 1086.48791138801 1090.99054474434 134.57 0.44505 134.57 134.37 134.81 0 139 20 11 0 0 0 2.3486E-17 2 86822 93.73 93.73 10 2.5859 1.7345 0 111010000 31701000 79308000 3830 369 1962 2170 6284;6285 6285 584;585;586;587;2696 LTPTSVLDYFGTGSVQR 17 0 1 Phospho (STY) _LT(ph)PTSVLDYFGTGSVQR_ LT(0.776)PT(0.174)S(0.05)VLDYFGTGSVQR LT(6.5)PT(-6.5)S(-11.93)VLDY(-37.14)FGT(-51.94)GS(-52.71)VQR 0 0 1 0 P35251;Q14756 P35251 P35251 RFC1;LLDBP Replication factor C subunit 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 965.9641 2 960.958781 1919.90301 63065.61 0.49305 0.00047381 -0.96352 -0.0009259 -0.47046 -0.0004521 961.459342932664 965.96364377772 133.33 0.43419 133.33 133.01 133.45 0 85 31 5 0 0 0 0.00047146 2 81154 58.09 45.14 6 0.19333 0.22835 0 14198000 10713000 3484900 3831 986 1963 2171 6286;6287 6287 2882 LTPVRPAAASPIVSGAR 17 0 2 Phospho (STY) _LTPVRPAAAS(ph)PIVSGAR_ LT(0.063)PVRPAAAS(0.934)PIVS(0.002)GAR LT(-11.7)PVRPAAAS(11.7)PIVS(-25.75)GAR 0 0 1 1 I3VM54;I3VM53;Q9Y2K7;B4DSG1 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 581.6484 3 581.648616 1741.92402 80103.81 0.73725 0.00042882 -0.45789 -0.00026633 0.27937 0.00016249 581.648221058026 588.320776779072 86.063 1.0748 86.063 85.364 86.438 -7.6294E-06 202 103 5 0 0 0 0.00020047 1 46598 43.12 28.648 3 0.31534 0.39132 0 47031000 32308000 14724000 3832 888 1964 2172 6288 6288 1499;2838 LTPVRPAAASPIVSGAR 17 0 2 Phospho (STY) _LTPVRPAAAS(ph)PIVSGAR_ LT(0.043)PVRPAAAS(0.953)PIVS(0.003)GAR LT(-13.42)PVRPAAAS(13.42)PIVS(-24.84)GAR 0 0 1 1 I3VM54;I3VM53;Q9Y2K7;B4DSG1 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 581.6487 3 581.648616 1741.92402 79376.84 0.86759 0.00050463 -0.13681 -7.9578E-05 0.73077 0.00042505 581.648519484864 588.320695378608 80.148 1.4039 80.148 79.596 80.999 0 674 134 8 0 0 0 0.00033512 1 51447 41.136 23.078 3 0.64975 0.56208 0 30720000 17262000 13457000 3833 888 1964 2172 6289 6289 1499;2838 LTPVRPAAASPIVSGAR 17 0 2 2 Phospho (STY) _LT(ph)PVRPAAAS(ph)PIVSGAR_ LT(1)PVRPAAAS(0.996)PIVS(0.004)GAR LT(55.22)PVRPAAAS(23.73)PIVS(-23.73)GAR 0 0 2 1 I3VM54;I3VM53;Q9Y2K7;B4DSG1 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 608.3045 3 608.304059 1821.89035 76627.28 0.61343 0.00037315 -0.054795 -3.3332E-05 0.55863 0.00033982 608.304133728327 615.310377411589 89.151 1.3451 89.151 88.339 89.684 7.6294E-06 370 119 5 0 0 0 9.7677E-05 1 48729 60.218 45.78 3 0.57828 0.71855 0 64686000 38585000 26101000 3834 888 1964 2173 6290 6290 1499;2838 LTPVSLSNSPIK 12 1 0 Phospho (STY) _LTPVSLSNS(ph)PIK_ LTPVSLS(0.011)NS(0.989)PIK LT(-116.16)PVS(-59.57)LS(-19.59)NS(19.59)PIK 0 0 1 0 A4LAA3;P46100 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 672.3573 2 668.349618 1334.68468 73967.34 1.0313 0.00068924 0.50539 0.00033778 1.5367 0.001027 668.34987405607 672.357043137611 95.458 1.3971 95.458 94.779 96.176 0 728 122 9 0 0 0 8.3807E-42 5 53763 159.75 111.47 4 0.93677 1.1557 0 957260000 509720000 447540000 3835 422 1965 2174 6291;6292;6293;6294;6295 6293 717;718;719;2722 LTPVSLSNSPIK 12 1 0 Phospho (STY) _LTPVSLSNS(ph)PIK_ LTPVSLS(0.058)NS(0.942)PIK LT(-83.33)PVS(-40.26)LS(-12.1)NS(12.1)PIK 0 0 1 0 A4LAA3;P46100 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 672.3575 2 668.349618 1334.68468 74801.72 1.1219 0.00074985 -0.19641 -0.00013127 0.92554 0.00061858 668.349591430457 672.356545754027 99.492 2.9715 99.492 98.617 101.59 0 1460 282 10 0 0 0 4.6128E-06 4 63956 96.464 58.496 4 1.6146 1.0785 0 237340000 89071000 148270000 3836 422 1965 2174 6296;6297;6298;6299 6297 717;718;719;2722 LTPVSLSNSPIK 12 1 0 2 Phospho (STY) _LT(ph)PVSLSNS(ph)PIK_ LT(1)PVSLS(0.083)NS(0.917)PIK LT(66.23)PVS(-52.75)LS(-10.43)NS(10.43)PIK 0 0 2 0 A4LAA3;P46100 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 708.3344 2 708.332783 1414.65101 72544.01 1.5459 0.001095 0.26171 0.00018538 1.8076 0.0012804 708.333024169864 712.340136532979 102.02 1.1924 102.02 101.46 102.66 0 535 96 8 0 0 0 5.8879E-10 4 58563 108.06 83.979 6 1.038 1.2853 0 179390000 90471000 88916000 3837 422 1965 2175 6300;6301;6302;6303 6301 717;718;719;2722 LTPVSLSNSPIK 12 1 0 2 Phospho (STY) _LTPVS(ph)LSNS(ph)PIK_ LTPVS(0.987)LS(0.443)NS(0.571)PIK LT(-41.31)PVS(16.24)LS(-1.13)NS(1.13)PIK 0 0 2 0 A4LAA3;P46100 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 712.34 2 708.332783 1414.65101 71752.72 1.0499 0.00074366 -0.063996 -4.533E-05 0.98587 0.00069833 708.332697231221 712.339841042223 106.1 1.0653 106.1 105.61 106.67 7.6294E-06 406 71 8 0 0 0 0.0034812 3 61544 67.136 37.796 6 0.67112 0.83317 0 104090000 60943000 43148000 3838 422 1965 2175 6304;6305;6306 6305 717;718;719;2722 LTPVSLSNSPIK 12 1 0 2 Phospho (STY) _LTPVS(ph)LSNS(ph)PIK_ LT(0.005)PVS(0.874)LS(0.371)NS(0.75)PIK LT(-22.85)PVS(7.13)LS(-4.02)NS(4.02)PIK 0 0 2 0 A4LAA3;P46100 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 712.3404 2 708.332783 1414.65101 72898.87 1.1675 0.00082696 0.046152 3.2691E-05 1.2136 0.00085965 708.332839123926 712.339929604953 115.66 1.0505 115.66 115.26 116.31 0 512 88 8 0 0 0 0.0068119 1 74296 51.643 19.389 6 1.1755 0.7771 0 65694000 30122000 35572000 3839 422 1965 2175 6307 6307 717;718;719;2722 LTPVSLSNSPIK 12 1 0 3 Phospho (STY) _LT(ph)PVS(ph)LS(ph)NSPIK_ LT(1)PVS(0.993)LS(0.728)NS(0.28)PIK LT(54.27)PVS(19.85)LS(4.22)NS(-4.22)PIK 0 0 3 0 A4LAA3;P46100 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 748.3167 2 748.315948 1494.61734 70208.19 0.94696 0.00070863 -0.23834 -0.00017835 0.70862 0.00053027 748.315745237868 752.322759474234 106.29 1.0417 106.29 106.03 107.08 0 356 79 10 0 0 0 0.0084343 2 61731 67.358 46.107 4 0.77378 0.9576 0 231610000 126270000 105350000 3840 422 1965 2176 6308;6309 6309 717;718;719;2722 LTPVSPESSSTEEK 14 1 0 Phospho (STY) _LTPVS(ph)PESSSTEEK_ LTPVS(1)PESSSTEEK LT(-77.56)PVS(35.75)PES(-35.75)S(-42.5)S(-49.21)T(-55.88)EEK 0 0 1 0 B4E3V2;E7EMC7;Q13501 B4E3V2 B4E3V2 SQSTM1 Sequestosome-1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 785.848 2 785.847833 1569.68111 68580.73 0.69494 0.00054611 0.68139 0.00053547 1.3763 0.0010816 785.848032856438 789.85491393036 54.683 1.9281 54.683 53.528 55.456 -3.8147E-06 735 151 8 0 0 0 3.9463E-43 2 23241 157.2 128.9 6 1.477 1.8415 0 71469000 27842000 43627000 3841 687 1966 2177 6310;6311 6311 1133;2796 LTPVSPESSSTEEK 14 1 0 Phospho (STY) _LTPVS(ph)PESSSTEEK_ LTPVS(0.716)PES(0.151)S(0.034)S(0.043)T(0.056)EEK LT(-36.27)PVS(6.74)PES(-6.74)S(-13.24)S(-12.2)T(-11.1)EEK 0 0 1 0 B4E3V2;E7EMC7;Q13501 B4E3V2 B4E3V2 SQSTM1 Sequestosome-1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 785.8488 2 785.847833 1569.68111 67934.91 0.87924 0.00069095 -0.086495 -6.7972E-05 0.79275 0.00062298 785.847847846354 789.854786194684 48.753 1.1759 48.753 48.239 49.415 0 739 110 10 0 0 0 0.0029852 1 29105 47.545 33.776 6 1.2116 0.80772 0 105350000 48327000 57022000 3842 687 1966 2177 6312 6312 1133;2796 LTQEETNFK 9 1 0 Unmodified _LTQEETNFK_ 0 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 559.2848 2 555.277303 1108.54005 84270.45 0.7425 0.0004123 -0.19904 -0.00011052 0.54347 0.00030178 555.277208074612 559.284560015809 56.183 0.6245 56.183 55.99 56.614 0 137 51 4 0 0 0 0.0011195 1 24309 82.452 38.005 1 0.82028 0.97182 0 5318400 3093800 2224500 3843 1220 1967 2178 6313 6313 LTQSKAESEASLLNVSTPK 19 2 0 2 Phospho (STY) _LTQS(ph)KAES(ph)EASLLNVSTPK_ LTQS(0.708)KAES(0.323)EAS(0.323)LLNVS(0.323)T(0.323)PK LT(-38.51)QS(5.61)KAES(0)EAS(0)LLNVS(0)T(0)PK 0 0 2 1 H0UIC2;A0A075B754;Q96QE3 H0UIC2 H0UIC2 ATAD5 ATPase family AAA domain-containing protein 5 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 721.6734 3 721.670913 2161.99091 NaN NaN NaN 2.6933 0.0019437 NaN NaN NaN NaN 61.91 0.78979 61.91 61.258 62.048 -3.8147E-06 0 0 0 0.00048076 1 28703 44.391 7.7941 15 NaN NaN 0 40433000 40433000 0 3844 241 1968 2179 6314 6314 375;376;377;378;2665 LTQTSGETTHTDKEPVGEGK 20 2 0 Unmodified _LTQTSGETTHTDKEPVGEGK_ 0 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 529.5103 4 529.510465 2114.01276 81684.69 0.46557 0.00024652 -0.30923 -0.00016374 0.15633 8.278E-05 529.761181528929 533.517435701323 65.184 0.58176 65.184 64.939 65.521 0 298 41 12 0 0 0 0.00016044 2 31181 36.253 32.565 1 1.7729 2.4009 0 728800000 254150000 474650000 3845 994 1969 2180 6315;6316 6315 LTQTSGETTHTDKEPVGEGK 20 2 0 Unmodified _LTQTSGETTHTDKEPVGEGK_ 0 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 706.0137 3 705.678195 2114.01276 72371.69 0.82192 0.00058001 -0.38353 -0.00027065 0.43839 0.00030936 706.012319206424 711.020890498187 65.186 0.39261 65.186 64.984 65.377 0 205 28 10 0 0 0 4.9103E-37 2 31211 127.32 95.441 1 1.7077 2.2323 0 207690000 68343000 139350000 3846 994 1969 2180 6317;6318 6317 LTQTSGETTHTDKEPVGEGK 20 2 0 Unmodified _LTQTSGETTHTDKEPVGEGK_ 0 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 705.6791 3 705.678195 2114.01276 71950.29 0.97466 0.0006878 0.10488 7.4014E-05 1.0795 0.00076181 706.012592278569 711.021072464237 17.282 0.32348 17.282 17.155 17.479 0 69 11 11 0 0 0 2.4702E-28 1 4507 114.02 78.691 1 3.2064 2.4077 0 75224000 18397000 56828000 3847 994 1969 2180 6319 6319 LTQTSGETTHTDKEPVGEGK 20 2 0 Unmodified _LTQTSGETTHTDKEPVGEGK_ 0 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1066.0287 2 1058.01365 2114.01276 59777.09 0.68512 0.00072487 0.068451 7.2423E-05 0.75357 0.00079729 1058.01277897196 1066.02816898342 17.27 0.16859 17.27 17.182 17.351 0 23 5 6 0 0 0 1.5868E-08 1 4529 71.08 71.08 1 3.3182 2.6068 0 8040600 1983500 6057100 3848 994 1969 2180 6320 6320 LTQTSGETTHTHTEPTGDGK 20 1 0 Unmodified _LTQTSGETTHTHTEPTGDGK_ 0 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 700.3305 3 699.994295 2096.96105 73160.59 0.80186 0.0005613 -0.091483 -6.4037E-05 0.71038 0.00049726 700.328331307831 702.9998990895 61.997 0.32052 61.997 61.869 62.189 3.8147E-06 87 19 8 0 0 0 3.4083E-14 2 28798 86.539 86.539 1 1.6782 2.1189 0 47084000 19157000 27927000 3849 994 1970 2181 6321;6322 6322 LTQTSGETTHTHTEPTGDGK 20 1 0 Unmodified _LTQTSGETTHTHTEPTGDGK_ 0 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 527.5026 4 525.24754 2096.96105 82177.38 0.37137 0.00019506 -0.63125 -0.00033156 -0.25988 -0.0001365 525.498181031251 527.250233647281 62.002 0.52184 62.002 61.718 62.24 3.8147E-06 142 33 9 0 0 0 0.02655 1 28791 14.46 10.022 1 1.9139 2.3738 0 117680000 40796000 76886000 3850 994 1970 2181 6323 6323 LTQTSGETTHTHTEPTGDGK 20 1 0 Unmodified _LTQTSGETTHTHTEPTGDGK_ 0 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 699.9948 3 699.994295 2096.96105 72257.48 0.87989 0.00061592 -0.20676 -0.00014473 0.67312 0.00047118 700.328372904793 702.665593255469 62.918 1.6327 62.918 62.43 64.063 -3.8147E-06 839 132 10 0 0 0 6.4355E-74 2 29383 157.88 157.88 1 1.826 2.2614 0 165670000 60807000 104870000 3851 994 1970 2181 6324;6325 6324 LTQTSGETTHTHTEPTGDGK 20 1 0 Unmodified _LTQTSGETTHTHTEPTGDGK_ 0 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 527.2516 4 525.24754 2096.96105 82291.9 0.44569 0.0002341 -0.02232 -1.1723E-05 0.42337 0.00022237 525.498367946291 527.501708453934 62.965 1.9166 62.965 62.24 64.156 0 1175 154 12 0 0 0 1.4401E-05 1 29578 46.663 42.046 1 1.7884 2.2091 0 547150000 193360000 353790000 3852 994 1970 2181 6326 6326 LTQTSGETTHTHTEPTGDGK 20 1 0 Unmodified _LTQTSGETTHTHTEPTGDGK_ 0 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-SECPEP 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1053.4941 2 1049.4878 2096.96105 59384.16 0.27093 0.00028434 0.3036 0.00031863 0.57454 0.00060297 1049.98867831398 1053.49557353521 15.262 0.17794 15.262 15.158 15.336 0 13 3 6 0 0 0 7.3134E-13 1 2919 87.566 87.566 1 3.8794 2.7391 0 22312000 4892900 17419000 3853 994 1970 2181 6327 6327 LTQTSGQSTHTHKEPASGDEGIK 23 2 0 Unmodified _LTQTSGQSTHTHKEPASGDEGIK_ 0 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 607.0539 4 603.046475 2408.15679 79312.77 0.74995 0.00045226 0.14387 8.6761E-05 0.89382 0.00053902 603.04670512908 607.304497154628 16.018 0.27938 16.018 15.898 16.177 0 48 11 9 0 0 0 0.013147 1 3473 18.497 11.051 1 3.7649 3.3033 0 3984700 845630 3139100 3854 994 1971 2182 6328 6328 LTQTSGQSTHTHKEPASGDEGIK 23 2 0 Phospho (STY) _LTQTSGQSTHTHKEPAS(ph)GDEGIK_ LTQTSGQS(0.001)T(0.001)HT(0.001)HKEPAS(0.997)GDEGIK LT(-73.33)QT(-48.83)S(-40.35)GQS(-29.56)T(-29.56)HT(-29.56)HKEPAS(29.56)GDEGIK 0 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 835.7253 3 830.381651 2488.12312 67517.51 0.95974 0.00079695 -0.082419 -6.8439E-05 0.87732 0.00072851 830.716149199771 836.058602941411 17.419 0.23523 17.419 17.269 17.504 0 50 8 9 0 0 0 2.8915E-19 1 4643 83.236 71.791 7 0.97959 0.80072 0 23499000 11336000 12163000 3855 994 1971 2183 6329 6329 1789 LTRTSGETTQTHTEPTGDSK 20 1 1 Phospho (STY) _LTRT(ph)SGETTQTHTEPTGDSK_ LT(0.194)RT(0.476)S(0.329)GETTQTHTEPTGDSK LT(-3.9)RT(1.61)S(-1.61)GET(-30.33)T(-30.33)QT(-35.33)HT(-70.07)EPT(-108.21)GDS(-118.9)K 0 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 743.3362 3 743.00066 2225.98015 69324.54 0.9164 0.00068089 -0.49146 -0.00036516 0.42494 0.00031573 743.335161180956 749.008227227473 16.377 1.0774 16.377 16.047 17.124 0 265 38 15 0 0 0 3.5382E-37 2 3691 122.53 104.08 9 1.9549 1.514 0 669750000 227910000 441840000 3856 994 1972 2184 6330;6331 6330 2894 LTRTSGETTQTHTEPTGDSK 20 1 1 Phospho (STY) _LTRT(ph)SGETTQTHTEPTGDSK_ LT(0.299)RT(0.392)S(0.277)GET(0.01)T(0.01)QT(0.012)HTEPTGDSK LT(-1.17)RT(1.17)S(-1.5)GET(-16.02)T(-16.02)QT(-14.97)HT(-31.15)EPT(-45.49)GDS(-59.22)K 0 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1114.4996 2 1113.99735 2225.98015 57012.23 0.50934 0.0005674 -0.15812 -0.00017614 0.35122 0.00039126 1114.49884488704 1123.00843888508 16.351 0.37448 16.351 16.237 16.612 0 71 12 11 0 0 0 6.728E-10 1 3722 75.533 58.044 9 1.9944 1.5386 0 67290000 21770000 45520000 3857 994 1972 2184 6332 6332 2894 LTSPVTSISPIQASEK 16 1 0 2 Phospho (STY) _LTS(ph)PVTSIS(ph)PIQASEK_ LT(0.016)S(0.984)PVTSIS(0.999)PIQASEK LT(-17.76)S(17.76)PVT(-48.31)S(-35.53)IS(33.78)PIQAS(-33.78)EK 0 0 2 0 E9PMC9;B3KWI5;Q7Z589;B4E1Z2;B4E247 E9PMC9 E9PMC9 C11orf30;EMSY Protein EMSY MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 909.4238 2 909.420315 1816.82608 64973.4 1.5106 0.0013737 0.02824 2.5682E-05 1.5388 0.0013994 909.420315216893 913.42741604224 100.88 0.88465 100.88 100.47 101.36 -7.6294E-06 359 67 7 0 0 0 6.4503E-43 2 57805 138.66 129.47 15 0.55823 0.69631 0 70308000 39839000 30469000 3858 607 1973 2185 6333;6334 6334 999;1000;2783 LTSPVTSISPIQASEK 16 1 0 2 Phospho (STY) _LTS(ph)PVTSIS(ph)PIQASEK_ LT(0.044)S(0.954)PVT(0.077)S(0.164)IS(0.76)PIQAS(0.002)EK LT(-13.56)S(13.56)PVT(-10.06)S(-6.7)IS(6.7)PIQAS(-27.07)EK 0 0 2 0 E9PMC9;B3KWI5;Q7Z589;B4E1Z2;B4E247 E9PMC9 E9PMC9 C11orf30;EMSY Protein EMSY ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 909.9227 2 909.420315 1816.82608 NaN NaN NaN -0.41957 -0.00038157 NaN NaN NaN NaN 111.4 0.76652 111.4 111.13 111.9 -7.6294E-06 0 0 0 3.0888E-08 2 71791 83.894 66.816 15 NaN NaN 0 21632000 21632000 0 3859 607 1973 2185 6335;6336 6336 999;1000;2783 LTSPVTSISPIQASEK 16 1 0 Phospho (STY) _LT(ph)SPVTSISPIQASEK_ LT(0.545)S(0.452)PVT(0.003)S(0.001)ISPIQASEK LT(0.81)S(-0.81)PVT(-23.23)S(-29.12)IS(-35.54)PIQAS(-39.49)EK 0 0 1 0 E9PMC9;B3KWI5;Q7Z589;B4E1Z2;B4E247 E9PMC9 E9PMC9 C11orf30;EMSY Protein EMSY MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 869.4391 2 869.43715 1736.85975 NaN NaN NaN NaN NaN NaN NaN NaN NaN 102.09 1 102.09 101.59 102.59 0 0 0 0 0.0099058 1 58785 43.594 27.341 6 3860 607 1973 2186 6337 6337 999;1000;2783 LTSSCPDLPSQTDKKCS 17 2 0 Unmodified _LTSSCPDLPSQTDKKCS_ 0 0 0 2 Q8N3G0;Q2TAB5;P56962 Q8N3G0 Q8N3G0 DKFZp762D1813;STX17 Syntaxin-17 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 642.2984 3 641.964402 1922.87138 75031.27 0.85245 0.00054724 -1.6285 -0.0010454 -0.77605 -0.0004982 641.963367781523 647.306032357286 64.606 0.56796 64.606 64.25 64.818 0 228 41 8 0 0 0 0.0062232 1 30723 25.365 0.58079 1 1.4502 1.8392 0 70755000 24942000 45812000 3861 1011 1974 2187 6338 6338 LTTTGQVTSPVK 12 1 0 Phospho (STY) _LTTTGQVTS(ph)PVK_ LTTTGQVT(0.039)S(0.961)PVK LT(-114.35)T(-63.59)T(-57.44)GQVT(-13.88)S(13.88)PVK 0 0 1 0 K7ENR9;Q96DF0;K7ERZ5;P49916 K7ENR9 K7ENR9 LIG3 DNA ligase 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 656.3318 2 656.331425 1310.6483 75577.4 0.94444 0.00061987 -0.072076 -4.7306E-05 0.87237 0.00057256 656.331373759895 660.338421744362 56.485 1.5561 56.485 55.741 57.297 3.8147E-06 644 131 8 0 0 0 2.181E-25 3 24144 143.25 100.65 5 0.55255 0.6841 0 190850000 122130000 68716000 3862 905 1975 2188 6339;6340;6341 6339 1531 LTTTGQVTSPVK 12 1 0 Phospho (STY) _LTTTGQVTS(ph)PVK_ LTTTGQVT(0.115)S(0.885)PVK LT(-97.93)T(-65.2)T(-58.34)GQVT(-8.88)S(8.88)PVK 0 0 1 0 K7ENR9;Q96DF0;K7ERZ5;P49916 K7ENR9 K7ENR9 LIG3 DNA ligase 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 656.3325 2 656.331425 1310.6483 75399.94 1.187 0.00077904 -0.028205 -1.8512E-05 1.1588 0.00076053 656.331356107685 660.338470871393 49.873 1.6801 49.873 49.208 50.888 -3.8147E-06 887 159 8 0 0 0 6.5236E-14 3 29847 115.35 85.093 5 0.76763 0.51293 0 121770000 64405000 57369000 3863 905 1975 2188 6342;6343;6344 6342 1531 LTWHSCPEDEAQ 12 0 0 Phospho (STY) _LTWHS(ph)CPEDEAQ_ LT(0.008)WHS(0.992)CPEDEAQ LT(-20.91)WHS(20.91)CPEDEAQ 0 0 1 0 A4D177;Q13185 A4D177 A4D177 CBX3 Chromobox protein homolog 3 ISO-MSMS -1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 776.7928 2 776.792338 1551.57012 NaN NaN NaN 0.19093 0.00014831 NaN NaN NaN NaN 68.614 1.3901 68.614 68.003 69.393 0 0 0 0 9.1729E-174 2 34170 202.31 181.35 2 3864 411 1976 2189 6345;6346 6346 705 LTWHSCPEDEAQ 12 0 0 Phospho (STY) _LTWHS(ph)CPEDEAQ_ LT(0.147)WHS(0.853)CPEDEAQ LT(-7.63)WHS(7.63)CPEDEAQ 0 0 1 0 A4D177;Q13185 A4D177 A4D177 CBX3 Chromobox protein homolog 3 ISO-MSMS -1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 776.7925 2 776.792338 1551.57012 NaN NaN NaN -0.3094 -0.00024034 NaN NaN NaN NaN 66.48 1.7617 66.48 65.819 67.58 0 0 0 0 2.6936E-10 1 41454 102.4 89.523 2 3865 411 1976 2189 6347 6347 705 LTWHSCPEDEAQ 12 0 0 Unmodified _LTWHSCPEDEAQ_ 0 0 0 0 A4D177;Q13185 A4D177 A4D177 CBX3 Chromobox protein homolog 3 ISO-MSMS -1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 736.8102 2 736.809173 1471.60379 NaN NaN NaN 0.21213 0.0001563 NaN NaN NaN NaN 73.604 0.17036 73.604 73.495 73.665 0 0 0 0 0.011983 1 37539 49.715 31.896 1 3866 411 1976 2190 6348 6348 LVAIVDVIDQNR 12 0 1 Unmodified _LVAIVDVIDQNR_ 0 0 0 0 A8K7N0;Q6IPH7;P50914;E7EPB3;A0PJ62;B7Z6S8;A8K3Q9 A8K7N0 A8K7N0 RPL14 60S ribosomal protein L14 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 677.8882 2 677.888084 1353.76161 75056.44 0.79619 0.00053973 -0.037484 -2.541E-05 0.75871 0.00051432 677.88793393495 682.892155090119 117.99 1.1341 117.99 117.43 118.56 0 303 99 4 0 0 0 1.4125E-15 2 70834 125.48 105.15 1 0.91848 1.1037 0 18028000 9316400 8711500 3867 489 1977 2191 6349;6350 6349 LVAIVDVIDQNR 12 0 1 Unmodified _LVAIVDVIDQNR_ 0 0 0 0 A8K7N0;Q6IPH7;P50914;E7EPB3;A0PJ62;B7Z6S8;A8K3Q9 A8K7N0 A8K7N0 RPL14 60S ribosomal protein L14 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 682.8925 2 677.888084 1353.76161 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.84 1 117.84 117.34 118.34 -7.6294E-06 0 0 0 0.0041407 1 70636 88.681 47.652 1 3868 489 1977 2191 6351 6351 LVAIVDVIDQNR 12 0 1 Unmodified _LVAIVDVIDQNR_ 0 0 0 0 A8K7N0;Q6IPH7;P50914;E7EPB3;A0PJ62;B7Z6S8;A8K3Q9 A8K7N0 A8K7N0 RPL14 60S ribosomal protein L14 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 682.8933 2 677.888084 1353.76161 75788.75 1.1217 0.0007604 0.064386 4.3646E-05 1.1861 0.00080404 677.888044101276 682.89219598955 120.47 0.52226 120.47 120.21 120.73 0 203 46 6 0 0 0 0.0027926 2 77664 79.974 59.645 1 0.89783 0.71279 0 9667000 4977100 4689900 3869 489 1977 2191 6352;6353 6352 LVDVSPDRGSPPSR 14 0 2 Phospho (STY) _LVDVSPDRGS(ph)PPSR_ LVDVS(0.062)PDRGS(0.78)PPS(0.158)R LVDVS(-11.02)PDRGS(6.93)PPS(-6.93)R 0 0 1 1 A0A024R4V8;B4DZT6;Q9NYZ3 A0A024R4V8 A0A024R4V8 GTSE1 G2 and S phase-expressed protein 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 521.2515 3 521.250522 1560.72974 NaN NaN NaN 0.47163 0.00024584 NaN NaN NaN NaN 62.691 0.6665 62.691 62.327 62.994 -3.8147E-06 0 0 0 0.0017285 1 29110 45.115 22.016 3 NaN NaN 0 11678000 11678000 0 3870 95 1978 2192 6354 6354 128 LVETDFSTPTPR 12 0 1 2 Phospho (STY) _LVETDFST(ph)PT(ph)PR_ LVETDFS(0.261)T(0.78)PT(0.959)PR LVET(-66.19)DFS(-5.25)T(5.25)PT(12.57)PR 0 0 2 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 761.8154 2 761.814954 1521.61536 70585.95 0.8667 0.00066027 0.11259 8.5771E-05 0.97929 0.00074604 761.814782453729 766.819350412527 81.772 0.8875 81.772 81.316 82.203 0 267 82 5 0 0 0 2.4152E-20 1 43411 135.02 114.15 6 0.5341 0.66577 0 37897000 21125000 16772000 3871 1120 1979 2193 6355 6355 2954;2955 LVISHEEELIPLHK 14 1 0 Unmodified _LVISHEEELIPLHK_ 0 0 0 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 555.9875 3 552.982162 1655.92466 82927.95 0.47398 0.0002621 0.041367 2.2875E-05 0.51535 0.00028498 552.982318390994 555.653701659521 146.36 0.3129 146.36 146.17 146.48 0 103 25 6 0 0 0 0.015429 1 84379 26.541 19.66 1 0.79758 0.94535 0 5842800 2588700 3254100 3872 919 1980 2194 6356 6356 LVLPSNTPNVR 11 0 1 Phospho (STY) _LVLPS(ph)NTPNVR_ LVLPS(0.5)NT(0.5)PNVR LVLPS(0)NT(0)PNVR 0 0 1 0 Q03188;H0Y8J2;H0Y9W1 Q03188 Q03188 CENPC Centromere protein C ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 645.3356 2 645.334302 1288.65405 NaN NaN NaN 0.44268 0.00028567 NaN NaN NaN NaN 84.582 0.091957 84.582 84.537 84.629 0 0 0 0 0.01228 1 45581 49.813 7.8339 2 NaN NaN 0 6997600 6997600 0 3873 1035 1981 2195 6357 6357 1917;2914 LVLPSNTPNVR 11 0 1 Phospho (STY) _LVLPS(ph)NTPNVR_ LVLPS(0.574)NT(0.426)PNVR LVLPS(1.3)NT(-1.3)PNVR 0 0 1 0 Q03188;H0Y8J2;H0Y9W1 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 650.3398 2 645.334302 1288.65405 78005.05 1.0819 0.0006982 -0.013423 -8.6625E-06 1.0685 0.00068954 645.333588807615 650.338494140999 86.4 0.78221 86.4 86.1 86.882 0 283 71 6 0 0 0 0.013926 1 55419 45.915 15.98 2 0.94455 0.74335 0 14186000 6875400 7310900 3874 1035 1981 2195 6358 6358 1917;2914 LVNTTITPEPEPK 13 1 0 2 Phospho (STY) _LVNTT(ph)IT(ph)PEPEPK_ LVNT(0.306)T(0.721)IT(0.973)PEPEPK LVNT(-3.96)T(3.96)IT(14.04)PEPEPK 0 0 2 0 A0A024RAC0;Q86V48 A0A024RAC0 A0A024RAC0 LUZP1 Leucine zipper protein 1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 803.8658 2 799.859362 1597.70417 NaN NaN NaN 0.24152 0.00019318 NaN NaN NaN NaN 78.108 0.41119 78.108 77.823 78.234 0 0 0 0 0.002618 1 40690 50.562 32.698 3 NaN NaN 0 15690000 0 15690000 3875 180 1982 2196 6359 6359 2653;2654 LVNTTITPEPEPK 13 1 0 2 Phospho (STY) _LVNTT(ph)IT(ph)PEPEPK_ LVNT(0.18)T(0.821)IT(0.999)PEPEPK LVNT(-6.6)T(6.6)IT(29.94)PEPEPK 0 0 2 0 A0A024RAC0;Q86V48 A0A024RAC0 A0A024RAC0 LUZP1 Leucine zipper protein 1 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 804.3699 2 799.859362 1597.70417 NaN NaN NaN 0.65805 0.00052635 NaN NaN NaN NaN 84.869 0.62396 84.869 84.459 85.083 0 0 0 0 0.00089148 1 54418 65.895 47.584 3 NaN NaN 0 7875800 0 7875800 3876 180 1982 2196 6360 6360 2653;2654 LVNTTITPEPEPKPQPNSREK 21 2 1 2 Phospho (STY) _LVNTTIT(ph)PEPEPKPQPNS(ph)REK_ LVNT(0.052)T(0.185)IT(0.765)PEPEPKPQPNS(0.998)REK LVNT(-11.77)T(-6.19)IT(6.19)PEPEPKPQPNS(30.43)REK 0 0 2 2 A0A024RAC0;Q86V48 A0A024RAC0 A0A024RAC0 LUZP1 Leucine zipper protein 1 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 854.415 3 845.734576 2534.1819 NaN NaN NaN -0.27134 -0.00022948 NaN NaN NaN NaN 64.749 1.1574 64.749 64.278 65.435 0 0 0 0 3.0414E-06 1 40517 49.445 30.726 6 NaN NaN 0 32930000 0 32930000 3877 180 1983 2197 6361 6361 282;2653;2654 LVQSPNSYFMDVK 13 1 0 Oxidation (M),Phospho (STY) _LVQS(ph)PNSYFM(ox)DVK_ LVQSPNSYFM(1)DVK LVQS(0.98)PNS(0.019)Y(0.001)FMDVK LVQSPNSYFM(55.2)DVK LVQS(17.02)PNS(-17.02)Y(-29.96)FMDVK 0 1 1 0 Q5T4L4;P42677;A4D1G5;C9JLI6;H0YMV8;Q71UM5 Q5T4L4;C9JLI6 Q5T4L4 RPS27;LOC392748;RPS27L 40S ribosomal protein S27;40S ribosomal protein S27-like ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 816.3655 2 812.359857 1622.70516 NaN NaN NaN -0.28195 -0.00022905 NaN NaN NaN NaN 99.778 0.67609 99.778 99.522 100.2 -7.6294E-06 0 0 0 0.0014348 1 56806 55.196 38.846 3 NaN NaN 0 13693000 0 13693000 3878 990;743 1984 2198 6362 6362 196 1255 LVSESSDVLPK 11 1 0 2 Phospho (STY) _LVS(ph)ESS(ph)DVLPK_ LVS(0.997)ES(0.433)S(0.57)DVLPK LVS(22.69)ES(-1.19)S(1.19)DVLPK 0 0 2 0 CON__P05787;P05787;Q969I0;Q7L4M3 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 671.2954 2 667.288041 1332.56153 74614.48 0.70036 0.00046734 -0.081556 -5.4421E-05 0.61881 0.00041292 667.287803593247 671.294955146657 98.843 1.0284 98.843 98.326 99.354 0 380 86 6 0 0 0 1.7402E-08 2 56480 101.38 80.478 3 1.4166 1.7715 0 64344000 26704000 37640000 + 3879 754 1985 2199 6363;6364 6364 1273;1274;1275 LVSESSDVLPK 11 1 0 2 Phospho (STY) _LVS(ph)ES(ph)SDVLPK_ LVS(0.991)ES(0.576)S(0.434)DVLPK LVS(17.78)ES(1.25)S(-1.25)DVLPK 0 0 2 0 CON__P05787;P05787;Q969I0;Q7L4M3 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 671.2953 2 667.288041 1332.56153 75851.91 1.1992 0.0008002 -0.025927 -1.7301E-05 1.1732 0.00078289 667.288008291864 671.295083004288 109.34 0.89382 109.34 109.02 109.92 0 345 89 6 0 0 0 0.0092231 1 70218 48.822 44.21 3 1.6128 1.1605 0 20955000 8580500 12375000 + 3880 754 1985 2199 6365 6365 1273;1274;1275 LVSESSDVLPK 11 1 0 Phospho (STY) _LVSESS(ph)DVLPK_ LVS(0.007)ES(0.233)S(0.759)DVLPK LVS(-20.1)ES(-5.13)S(5.13)DVLPK 0 0 1 0 CON__P05787;P05787;Q969I0;Q7L4M3 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 631.3121 2 627.304876 1252.5952 NaN NaN NaN 0.39464 0.00024756 NaN NaN NaN NaN 81.646 1.0324 81.646 81.143 82.175 0 0 0 0 0.0018901 1 43351 68.536 40.331 3 NaN NaN 0 33485000 0 33485000 + 3881 754 1985 2200 6366 6366 1273;1274;1275 LVSESSDVLPK 11 1 0 Phospho (STY) _LVSES(ph)SDVLPK_ LVS(0.112)ES(0.444)S(0.444)DVLPK LVS(-5.96)ES(0)S(0)DVLPK 0 0 1 0 CON__P05787;P05787;Q969I0;Q7L4M3 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 631.8145 2 627.304876 1252.5952 NaN NaN NaN 0.11624 7.292E-05 NaN NaN NaN NaN 83.512 0.94582 83.512 83.089 84.035 0 0 0 0 0.0099968 2 53360 53.967 21.36 3 NaN NaN 0 17973000 0 17973000 + 3882 754 1985 2200 6367;6368 6368 1273;1274;1275 LVSLSINELR 10 0 1 Phospho (STY) _LVS(ph)LSINELR_ LVS(0.977)LS(0.023)INELR LVS(16.37)LS(-16.37)INELR 0 0 1 0 REV__Q5VVD7 REV__Q5VVD7 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 612.3248 2 612.323403 1222.63225 NaN NaN NaN 3.1022 0.0018996 NaN NaN NaN NaN 94.872 0.66855 94.872 94.519 95.188 0 0 0 0 0.032515 1 53083 40.715 8.1915 2 NaN NaN 0 7910500 7910500 0 + 3883 1275 1986 2201 6369 6369 2612 LVSPEPPPK 9 1 0 Phospho (STY) _LVS(ph)PEPPPK_ LVS(1)PEPPPK LVS(44.86)PEPPPK 0 0 1 0 B3KUB6;B7Z653;A0A0C4DH22;Q9H4G0 B3KUB6 B3KUB6 EPB41L1 Band 4.1-like protein 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 522.2626 2 522.262283 1042.51001 NaN NaN NaN 0.34692 0.00018118 NaN NaN NaN NaN 54.877 0.32931 54.877 54.661 54.99 0 0 0 0 0.021591 1 23365 44.863 11.486 1 NaN NaN 0 1483000 1483000 0 3884 329 1987 2202 6370 6370 519 LVSPEPPPK 9 1 0 Phospho (STY) _LVS(ph)PEPPPK_ LVS(1)PEPPPK LVS(44.64)PEPPPK 0 0 1 0 B3KUB6;B7Z653;A0A0C4DH22;Q9H4G0 B3KUB6 B3KUB6 EPB41L1 Band 4.1-like protein 1 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 522.2624 2 522.262283 1042.51001 NaN NaN NaN 0.3009 0.00015715 NaN NaN NaN NaN 47.121 0.60783 47.121 46.787 47.395 0 0 0 0 0.022118 1 28089 44.639 12.225 1 NaN NaN 0 2233600 2233600 0 3885 329 1987 2202 6371 6371 519 LVSPGSANETSSILVESVTR 20 0 1 Phospho (STY) _LVS(ph)PGSANETSSILVESVTR_ LVS(0.795)PGS(0.205)ANETSSILVESVTR LVS(5.89)PGS(-5.89)ANET(-38.45)S(-45.39)S(-44.77)ILVES(-65.57)VT(-65.57)R 0 0 1 0 Q68CT4;E7EN95;A0A024R321;O75369;A0A0A0MT44 Q68CT4 Q68CT4 DKFZp686A1668;FLNB Filamin-B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1068.5286 2 1063.52247 2125.03039 59944.61 0.27463 0.00029208 0.80568 0.00085686 1.0803 0.0011489 1063.52330874219 1068.52778666152 120.91 0.41418 120.91 120.71 121.12 0 119 31 6 0 0 0 9.412E-09 1 72955 70.281 61.768 7 1.4371 1.6915 0 13816000 4244300 9571900 3886 71 1988 2203 6372 6372 92 LVVGNGPEGPGLSSTGK 17 1 0 Phospho (STY) _LVVGNGPEGPGLS(ph)STGK_ LVVGNGPEGPGLS(0.426)S(0.426)T(0.147)GK LVVGNGPEGPGLS(0)S(0)T(-4.62)GK 0 0 1 0 A0PJ70;A8K9K0;Q8TF76 A0PJ70 A0PJ70 GSG2 Serine/threonine-protein kinase haspin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 824.9007 2 824.900734 1647.78692 68780.27 0.94392 0.00077864 -0.0076697 -6.3267E-06 0.93625 0.00077231 824.900586429183 828.907888348215 80.684 0.68655 80.684 80.382 81.068 0 212 62 5 0 0 0 1.6039E-06 3 42975 73.593 66.465 3 0.82971 1.0245 0 23406000 13215000 10191000 3887 400 1989 2204 6373;6374;6375 6375 685;686;2716 LVVGNGPEGPGLSSTGK 17 1 0 Phospho (STY) _LVVGNGPEGPGLSS(ph)TGK_ LVVGNGPEGPGLS(0.166)S(0.611)T(0.223)GK LVVGNGPEGPGLS(-5.65)S(4.38)T(-4.38)GK 0 0 1 0 A0PJ70;A8K9K0;Q8TF76 A0PJ70 A0PJ70 GSG2 Serine/threonine-protein kinase haspin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 829.41 2 824.900734 1647.78692 68177.23 0.93242 0.00076915 0.43127 0.00035576 1.3637 0.0011249 824.900815440122 828.907699182848 83.164 0.68513 83.164 82.865 83.55 7.6294E-06 403 64 9 0 0 0 9.08E-10 1 53216 88.593 88.593 3 2.1541 1.3985 0 33487000 11495000 21993000 3888 400 1989 2204 6376 6376 685;686;2716 LVVGNGPEGPGLSSTGK 17 1 0 2 Phospho (STY) _LVVGNGPEGPGLSS(ph)T(ph)GK_ LVVGNGPEGPGLS(0.374)S(0.829)T(0.797)GK LVVGNGPEGPGLS(-4.89)S(5.63)T(4.89)GK 0 0 2 0 A0PJ70;A8K9K0;Q8TF76 A0PJ70 A0PJ70 GSG2 Serine/threonine-protein kinase haspin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 868.8911 2 864.8839 1727.75325 64706.42 0.79629 0.0006887 0.021866 1.8912E-05 0.81816 0.00070761 864.883981832988 868.890980584488 86.663 0.77335 86.663 86.241 87.014 -7.6294E-06 232 72 5 0 0 0 0.00019697 1 47143 45.873 39.49 3 0.97313 1.2326 0 42951000 23649000 19303000 3889 400 1989 2205 6377 6377 685;686;2716 LVVSHGSIDLDVGGEEL 17 0 0 Phospho (STY) _LVVS(ph)HGSIDLDVGGEEL_ LVVS(0.5)HGS(0.5)IDLDVGGEEL LVVS(0)HGS(0)IDLDVGGEEL 0 0 1 0 A0A0D9SF94;Q86Y97 A0A0D9SF94 A0A0D9SF94 SUV420H2 Histone-lysine N-methyltransferase SUV420H2 ISO-MSMS -1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 909.9323 2 909.929689 1817.84482 NaN NaN NaN 0.79442 0.00072287 NaN NaN NaN NaN 123.47 0.27809 123.47 123.3 123.58 0 0 0 0 1.0105E-15 1 74757 102.52 84.424 2 3890 332 1990 2206 6378 6378 522;523 LVVSHGSIDLDVGGEEL 17 0 0 Phospho (STY) _LVVS(ph)HGSIDLDVGGEEL_ LVVS(0.5)HGS(0.5)IDLDVGGEEL LVVS(0)HGS(0)IDLDVGGEEL 0 0 1 0 A0A0D9SF94;Q86Y97 A0A0D9SF94 A0A0D9SF94 SUV420H2 Histone-lysine N-methyltransferase SUV420H2 MSMS -1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 909.9296 2 909.929689 1817.84482 NaN NaN NaN NaN NaN NaN NaN NaN NaN 123.63 1 123.63 123.13 124.13 7.6294E-06 0 0 0 3.2185E-06 1 74865 67.115 47.904 2 3891 332 1990 2206 6379 6379 522;523 LYDIDVAK 8 1 0 Unmodified _LYDIDVAK_ 0 0 0 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 468.7552 2 468.755475 935.496398 NaN NaN NaN -0.19724 -9.2458E-05 NaN NaN NaN NaN 84.086 0.34653 84.086 83.778 84.125 0 0 0 0 0.029871 1 45046 47.082 16.662 1 NaN NaN 0 13277000 13277000 0 3892 511 1991 2207 6380 6380 LYPLRK 6 1 1 Unmodified _LYPLRK_ 0 0 0 1 P42766 P42766 P42766 RPL35 60S ribosomal protein L35 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 395.2528 2 395.252706 788.490859 NaN NaN NaN 0.54361 0.00021486 NaN NaN NaN NaN 83.109 1.0221 83.109 82.783 83.805 7.6294E-06 0 0 0 7.6202E-05 1 44787 80.317 13.027 1 NaN NaN 0 29749000 29749000 0 3893 992 1992 2208 6381 6381 LYPLRK 6 1 1 Unmodified _LYPLRK_ 0 0 0 1 P42766 P42766 P42766 RPL35 60S ribosomal protein L35 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 395.2527 2 395.252706 788.490859 NaN NaN NaN 0.9175 0.00036264 NaN NaN NaN NaN 85.051 0.52582 85.051 84.847 85.372 0 0 0 0 0.0015225 1 45826 67.29 5.9655 1 NaN NaN 0 18047000 18047000 0 3894 992 1992 2208 6382 6382 LYPLRK 6 1 1 Unmodified _LYPLRK_ 0 0 0 1 P42766 P42766 P42766 RPL35 60S ribosomal protein L35 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 395.2531 2 395.252706 788.490859 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.217 1 84.217 83.717 84.717 0 0 0 0 0.010858 1 45304 85.446 8.8937 1 3895 992 1992 2208 6383 6383 LYSILQGDSPTK 12 1 0 Phospho (STY) _LYSILQGDS(ph)PTK_ LYSILQGDS(0.69)PT(0.31)K LY(-67.19)S(-40.13)ILQGDS(3.47)PT(-3.47)K 0 0 1 0 O15042 O15042 O15042 U2SURP U2 snRNP-associated SURP motif-containing protein MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 701.3384 2 701.336707 1400.65886 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.275 1 99.275 98.775 99.775 0 0 0 0 9.6047E-05 1 56566 69.03 34.777 4 3896 922 1993 2209 6384 6384 1551 LYTLVTYVPVTTFK 14 1 0 Unmodified _LYTLVTYVPVTTFK_ 0 0 0 0 H7C2W9;C9JU56;B7Z4E3;B2R4C1;B7Z4C8;P62899;Q76N53 H7C2W9 H7C2W9 RPL31 60S ribosomal protein L31 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 823.4688 2 822.966 1643.91745 67938.59 1.01 0.00083118 0.37013 0.00030461 1.3801 0.0011358 822.966155455346 826.97352010742 134.31 0.17239 134.31 134.22 134.39 0 62 13 8 0 0 0 1.9433E-05 2 86627 85.958 85.958 1 0.84866 0.63817 0 10074000 5459800 4613700 3897 526 1994 2210 6385;6386 6385 LYTSAPNTSQGK 12 1 0 Phospho (STY) _LYTSAPNT(ph)SQGK_ LYTSAPNT(0.5)S(0.5)QGK LY(-79.12)T(-46.16)S(-32.35)APNT(0)S(0)QGK 0 0 1 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 673.8033 2 673.803032 1345.59151 75600.95 0.68181 0.00045941 0.13665 9.2075E-05 0.81846 0.00055148 673.803042581563 677.810146783195 43.632 0.839 43.632 43.195 44.034 3.8147E-06 271 61 6 0 0 0 0.0037414 1 15825 83.137 77.822 5 0.48019 0.5693 0 6315500 3866800 2448700 3898 1097 1995 2211 6387 6387 2069;2941 MADFHKEEMDDQDK 14 2 0 2 Oxidation (M) _M(ox)ADFHKEEM(ox)DDQDK_ M(1)ADFHKEEM(1)DDQDK M(92.27)ADFHKEEM(92.27)DDQDK 0 2 0 1 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 596.2469 3 590.903031 1769.68726 83187.72 0.43411 0.00025652 -0.24993 -0.00014769 0.18418 0.00010883 590.902793210521 596.245811507433 66.467 0.3196 66.467 66.323 66.642 0 72 21 5 0 0 0 9.0509E-08 1 32334 92.265 83.666 1 1.9297 2.2331 0 20870000 7509500 13361000 3899 1248 1996 2212 6388 6388 359;360 MAIMVQSPMFDGK 13 1 0 3 Oxidation (M),Phospho (STY) _M(ox)AIM(ox)VQS(ph)PM(ox)FDGK_ M(1)AIM(1)VQSPM(1)FDGK MAIMVQS(1)PMFDGK M(110.38)AIM(110.38)VQSPM(110.38)FDGK MAIMVQS(110.38)PMFDGK 0 3 1 0 B2R5W3;A0A024R3T8;P09874;B4E0E1;Q05D33;Q6PJL0;Q5VX84;Q5VX85 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 795.8284 2 791.821195 1581.62784 70500.76 0.95324 0.0007548 0.093116 7.3731E-05 1.0464 0.00082853 791.821338956061 795.828315363161 77.257 0.96918 77.257 76.814 77.783 0 187 84 4 0 0 0 1.0584E-14 1 40020 110.38 100.15 1 1.6263 2.0505 0 30111000 11726000 18385000 3900 81 1997 2213 6389 6389 17;18;19 106 MAIMVQSPMFDGK 13 1 0 3 Oxidation (M),Phospho (STY) _M(ox)AIM(ox)VQS(ph)PM(ox)FDGK_ M(1)AIM(1)VQSPM(1)FDGK MAIMVQS(1)PMFDGK M(101.53)AIM(101.53)VQSPM(101.53)FDGK MAIMVQS(101.53)PMFDGK 0 3 1 0 B2R5W3;A0A024R3T8;P09874;B4E0E1;Q05D33;Q6PJL0;Q5VX84;Q5VX85 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 795.8287 2 791.821195 1581.62784 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.748 1 77.748 77.248 78.248 0 0 0 0 0.0017812 1 40606 101.53 81.106 1 3901 81 1997 2213 6390 6390 17;18;19 106 MAIMVQSPMFDGK 13 1 0 3 Oxidation (M),Phospho (STY) _M(ox)AIM(ox)VQS(ph)PM(ox)FDGK_ M(1)AIM(1)VQSPM(1)FDGK MAIMVQS(1)PMFDGK M(68.83)AIM(68.83)VQSPM(68.83)FDGK MAIMVQS(68.83)PMFDGK 0 3 1 0 B2R5W3;A0A024R3T8;P09874;B4E0E1;Q05D33;Q6PJL0;Q5VX84;Q5VX85 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 792.3229 2 791.821195 1581.62784 70486.05 1.2437 0.00098477 -1.1519 -0.00091209 0.091793 7.2683E-05 791.820923113811 795.828199131928 79.372 0.94273 79.372 78.799 79.741 0 403 88 8 0 0 0 0.00053392 3 50539 68.83 58.186 1 0.77208 0.60317 0 13597000 7865600 5731300 3902 81 1997 2213 6391;6392;6393 6391 17;18;19 106 MALPPQEDATASPPR 15 0 1 Oxidation (M),Phospho (STY) _M(ox)ALPPQEDATAS(ph)PPR_ M(1)ALPPQEDATASPPR MALPPQEDAT(0.099)AS(0.901)PPR M(114.01)ALPPQEDATASPPR MALPPQEDAT(-9.6)AS(9.6)PPR 0 1 1 0 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 838.8718 2 838.87112 1675.72769 NaN NaN NaN -0.13332 -0.00011184 NaN NaN NaN NaN 63.871 2.1007 63.871 62.924 65.025 -3.8147E-06 0 0 0 1.9666E-19 2 30196 114.01 80.147 2 NaN NaN 0 44292000 44292000 0 3903 383 1998 2214 6394;6395 6394 94 615 MAPALSGANLTSPR 14 0 1 Oxidation (M),Phospho (STY) _M(ox)APALSGANLTS(ph)PR_ M(1)APALSGANLTSPR MAPALSGANLT(0.202)S(0.798)PR M(113.65)APALSGANLTSPR MAPALS(-40.19)GANLT(-5.97)S(5.97)PR 0 1 1 0 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 741.345 2 741.344541 1480.67453 69432.58 0.8524 0.00063192 0.21585 0.00016002 1.0683 0.00079195 741.344761582004 746.348858762159 78.789 1.108 78.789 78.159 79.267 7.6294E-06 383 97 5 0 0 0 1.2715E-17 3 41672 113.65 99.496 3 0.75854 0.95518 0 52684000 28678000 24006000 3904 383 1999 2215 6396;6397;6398 6398 95 616;2700 MAPALSGANLTSPR 14 0 1 Oxidation (M),Phospho (STY) _M(ox)APALSGANLT(ph)SPR_ M(1)APALSGANLTSPR MAPALS(0.068)GANLT(0.806)S(0.126)PR M(85.27)APALSGANLTSPR MAPALS(-10.73)GANLT(8.07)S(-8.07)PR 0 1 1 0 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 746.3474 2 741.344541 1480.67453 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.192 1 78.192 77.692 78.692 0 0 0 0 0.0002785 1 40928 85.271 60.418 3 3905 383 1999 2215 6399 6399 95 616;2700 MAPALSGANLTSPR 14 0 1 Oxidation (M),Phospho (STY) _M(ox)APALSGANLT(ph)SPR_ M(1)APALSGANLTSPR MAPALS(0.087)GANLT(0.735)S(0.178)PR M(73.39)APALSGANLTSPR MAPALS(-9.28)GANLT(6.15)S(-6.15)PR 0 1 1 0 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 746.35 2 741.344541 1480.67453 NaN NaN NaN -0.23142 -0.00017156 NaN NaN NaN NaN 79.936 0.70927 79.936 79.671 80.381 0 0 0 0 0.00043155 1 51200 73.386 52.135 3 NaN NaN 0 7318000 0 7318000 3906 383 1999 2215 6400 6400 95 616;2700 MAPTPIPTRSPSDSSTASTPVAEQIER 27 0 2 Oxidation (M),Phospho (STY) _M(ox)APTPIPTRSPS(ph)DSSTASTPVAEQIER_ M(1)APTPIPTRSPSDSSTASTPVAEQIER MAPT(0.001)PIPT(0.035)RS(0.035)PS(0.218)DS(0.218)S(0.218)T(0.218)AS(0.049)T(0.009)PVAEQIER M(64.95)APTPIPTRSPSDSSTASTPVAEQIER MAPT(-25.33)PIPT(-8)RS(-8)PS(0)DS(0)S(0)T(0)AS(-6.5)T(-13.72)PVAEQIER 0 1 1 1 B3KSQ7;Q16643;B7Z2Z0;D6R9Q9 B3KSQ7 B3KSQ7 DBN1 Drebrin MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 981.4631 3 974.78987 2921.34778 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.186 1 91.186 90.686 91.686 -7.6294E-06 0 0 0 1.2508E-10 1 50318 64.954 52.64 9 3907 598 2000 2216 6401 6401 152 982;983;984;985;2779 MATEVAADALGEEWK 15 1 0 Oxidation (M) _M(ox)ATEVAADALGEEWK_ M(1)ATEVAADALGEEWK M(153.63)ATEVAADALGEEWK 0 1 0 0 Q96DV6;A2A3R6;P62753;A2A3R7;A2A3R5 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 822.889 2 818.879795 1635.74504 NaN NaN NaN NaN NaN NaN NaN NaN NaN 101.8 1 101.8 101.3 102.3 -7.6294E-06 0 0 0 4.0123E-32 1 58587 153.63 110.12 1 3908 405 2001 2217 6402 6402 103 MAVTFIGNSTAIQELFK 17 1 0 Oxidation (M) _M(ox)AVTFIGNSTAIQELFK_ M(1)AVTFIGNSTAIQELFK M(69.45)AVTFIGNSTAIQELFK 0 1 0 0 B7ZAF0;Q5JP53;Q6LC01;Q5SU16;P07437;Q5ST81;B7ZAK1;B4DY90;B4DMJ5;Q9BUU9;B4E052;B4DQN9;B4DMU8;Q6P602;Q96B85;B4DXZ5;A4UCU2 B7ZAF0 B7ZAF0 TUBB Tubulin beta chain ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 947.4972 2 943.490044 1884.96554 NaN NaN NaN -0.47513 -0.00044828 NaN NaN NaN NaN 133.5 0.13208 133.5 133.47 133.6 0 0 0 0 3.9122E-06 1 81327 69.451 46.918 1 NaN NaN 0 7014800 0 7014800 3909 718 2002 2218 6403 6403 186 MDPQRSPLLEVK 12 1 1 Acetyl (Protein N-term),Oxidation (M),Phospho (STY) _(ac)M(ox)DPQRS(ph)PLLEVK_ M(1)DPQRSPLLEVK MDPQRS(1)PLLEVK M(92.27)DPQRSPLLEVK MDPQRS(92.27)PLLEVK 1 1 1 1 A2AB20;A0A140T9E6;B4E063;A0A024RCS7;Q9BW19 A2AB20 A2AB20 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 775.8687 2 775.867849 1549.72114 69766.09 0.67532 0.00052396 0.27701 0.00021493 0.95233 0.00073888 775.868153201714 784.87926199307 87.91 1.1264 87.91 87.248 88.374 0 404 101 5 0 0 0 1.7188E-06 3 48030 92.265 56.613 1 0.63295 0.74868 0 48269000 26965000 21304000 3910 216 2003 2219 6404;6405;6406 6406 53 338 MDPQRSPLLEVK 12 1 1 Acetyl (Protein N-term),Oxidation (M),Phospho (STY) _(ac)M(ox)DPQRS(ph)PLLEVK_ M(1)DPQRSPLLEVK MDPQRS(1)PLLEVK M(82.92)DPQRSPLLEVK MDPQRS(82.92)PLLEVK 1 1 1 1 A2AB20;A0A140T9E6;B4E063;A0A024RCS7;Q9BW19 A2AB20 A2AB20 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 784.88 2 775.867849 1549.72114 68863.94 1.2587 0.00097656 -0.11298 -8.7661E-05 1.1457 0.0008889 776.368745433797 784.879226282961 90.594 1.2078 90.594 90.123 91.331 0 555 116 7 0 0 0 9.4792E-05 2 58258 82.925 54.748 1 1.5558 1.189 0 22275000 9326700 12948000 3911 216 2003 2219 6407;6408 6407 53 338 MDRTPPPPTLSPAAITVGR 19 0 2 Oxidation (M),2 Phospho (STY) _M(ox)DRT(ph)PPPPTLS(ph)PAAITVGR_ M(1)DRTPPPPTLSPAAITVGR MDRT(1)PPPPT(0.009)LS(0.991)PAAITVGR M(83.88)DRTPPPPTLSPAAITVGR MDRT(42.89)PPPPT(-20.51)LS(20.51)PAAIT(-38.52)VGR 0 1 2 1 E7EX82;Q8NDX5;B4E2T1;A5YM43;H7C4H9 E7EX82 E7EX82 PHC3 Polyhomeotic-like protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 718.6677 3 718.333578 2151.97891 70625.22 1.0033 0.00072071 0.15009 0.00010781 1.1534 0.00082853 718.335518157485 725.005695468362 105.67 1.2712 105.67 105.19 106.47 0 580 85 11 0 0 0 7.4977E-14 2 61179 83.879 83.879 6 1.0988 1.3702 0 152330000 74716000 77617000 3912 796 2004 2220 6409;6410 6410 216 1368;2826 MDRTPPPPTLSPAAITVGR 19 0 2 Oxidation (M),2 Phospho (STY) _M(ox)DRT(ph)PPPPTLS(ph)PAAITVGR_ M(1)DRTPPPPTLSPAAITVGR MDRT(0.999)PPPPT(0.289)LS(0.706)PAAIT(0.007)VGR M(40.82)DRTPPPPTLSPAAITVGR MDRT(29.51)PPPPT(-3.89)LS(3.89)PAAIT(-20.32)VGR 0 1 2 1 E7EX82;Q8NDX5;B4E2T1;A5YM43;H7C4H9 E7EX82 E7EX82 PHC3 Polyhomeotic-like protein 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 725.3411 3 718.333578 2151.97891 71243.27 1.1759 0.00084468 -0.21972 -0.00015783 0.95616 0.00068684 718.333479587242 725.00569358077 111.3 1.1188 111.3 110.75 111.87 7.6294E-06 897 108 11 0 0 0 0.00011392 1 71839 40.819 40.819 6 1.3886 1.2096 0 124800000 53464000 71336000 3913 796 2004 2220 6411 6411 216 1368;2826 MDSFDEDLAR 10 0 1 Oxidation (M),Phospho (STY) _M(ox)DS(ph)FDEDLAR_ M(1)DSFDEDLAR MDS(1)FDEDLAR M(127.87)DSFDEDLAR MDS(127.87)FDEDLAR 0 1 1 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 652.7408 2 647.7365 1293.45845 74670.27 0.89496 0.0005797 -0.22078 -0.00014301 0.67418 0.00043669 647.736251608861 652.740583407344 74.886 1.2822 74.886 74.249 75.531 0 448 113 5 0 0 0 3.6225E-08 2 38486 127.87 110.06 1 1.0091 1.2698 0 47863000 24024000 23840000 3914 1248 2005 2221 6412;6413 6412 361 2571 MDSFDEDLAR 10 0 1 Oxidation (M),Phospho (STY) _M(ox)DS(ph)FDEDLAR_ M(1)DSFDEDLAR MDS(1)FDEDLAR M(42.1)DSFDEDLAR MDS(42.1)FDEDLAR 0 1 1 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 652.741 2 647.7365 1293.45845 78136.7 1.1965 0.00077501 0.020245 1.3113E-05 1.2167 0.00078812 647.736521379055 652.740550762912 75.439 0.86507 75.439 74.976 75.841 -7.6294E-06 176 72 4 0 0 0 0.018705 1 48124 42.095 26.206 1 1.3584 1.1002 0 7152200 3159700 3992500 3915 1248 2005 2221 6414 6414 361 2571 MDSFDEDLARPSGLLAQER 19 0 2 Oxidation (M),Phospho (STY) _M(ox)DS(ph)FDEDLARPSGLLAQER_ M(1)DSFDEDLARPSGLLAQER MDS(1)FDEDLARPSGLLAQER M(56.77)DSFDEDLARPSGLLAQER MDS(44.08)FDEDLARPS(-44.08)GLLAQER 0 1 1 1 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 749.6663 3 749.331352 2244.97223 69070.2 0.80207 0.00060102 -0.32331 -0.00024226 0.47877 0.00035875 749.665556421851 756.003436488939 110.16 1.0632 110.16 109.71 110.77 0 681 88 11 0 0 0 3.851E-07 1 64706 56.766 49.876 2 1.0411 1.3009 0 249470000 115110000 134370000 3916 1248 2006 2222 6415 6415 361 2571 MDSNFGLAGLPGSPK 15 1 0 Oxidation (M),Phospho (STY) _M(ox)DSNFGLAGLPGS(ph)PK_ M(1)DSNFGLAGLPGSPK MDSNFGLAGLPGS(1)PK M(233.2)DSNFGLAGLPGSPK MDS(-184.88)NFGLAGLPGS(184.88)PK 0 1 1 0 O43463 O43463 O43463 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 793.8505 2 793.849656 1585.68476 67316.51 1.0769 0.00085486 -0.21291 -0.00016902 0.86394 0.00068584 793.84964159931 797.856530432094 107.78 1.4914 107.78 107.16 108.65 -7.6294E-06 837 114 11 0 0 0 1.3614E-182 4 63212 233.2 221.27 2 1.2048 1.4871 0 764000000 361190000 402810000 3917 925 2007 2223 6416;6417;6418;6419 6419 250 1555 MDSNFGLAGLPGSPK 15 1 0 Oxidation (M),Phospho (STY) _M(ox)DSNFGLAGLPGS(ph)PK_ M(1)DSNFGLAGLPGSPK MDSNFGLAGLPGS(1)PK M(156.08)DSNFGLAGLPGSPK MDS(-133.16)NFGLAGLPGS(133.16)PK 0 1 1 0 O43463 O43463 O43463 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 797.8575 2 793.849656 1585.68476 67257.7 1.2563 0.0009973 -0.3393 -0.00026935 0.91698 0.00072795 793.849766536712 797.856609974602 113.8 1.739 113.8 113.21 114.94 -7.6294E-06 1122 165 11 0 0 0 3.1409E-42 4 73003 156.08 146.25 2 1.5132 1.0096 0 482110000 196710000 285400000 3918 925 2007 2223 6420;6421;6422;6423 6421 250 1555 MDSNFGLAGLPGSPK 15 1 0 Phospho (STY) _MDSNFGLAGLPGS(ph)PK_ MDSNFGLAGLPGS(1)PK MDS(-48.45)NFGLAGLPGS(48.45)PK 0 0 1 0 O43463 O43463 O43463 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 790.3618 2 785.852199 1569.68984 67762.93 1.2012 0.00094393 -0.011732 -9.2194E-06 1.1894 0.00093472 785.852192924913 789.859195370255 120.19 0.959 120.19 119.71 120.67 7.6294E-06 438 83 7 0 0 0 0.0012274 2 77392 51.089 44.705 2 2.183 1.4179 0 36828000 10289000 26540000 3919 925 2007 2224 6424;6425 6424 1555 MDSNFGLAGLPGSPKK 16 2 0 Oxidation (M),Phospho (STY) _M(ox)DSNFGLAGLPGS(ph)PKK_ M(1)DSNFGLAGLPGSPKK MDSNFGLAGLPGS(1)PKK M(90.45)DSNFGLAGLPGSPKK MDS(-84.82)NFGLAGLPGS(84.82)PKK 0 1 1 1 O43463 O43463 O43463 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 572.2667 3 572.267184 1713.77972 79059.58 0.66116 0.00037836 0.049305 2.8216E-05 0.71046 0.00040658 572.267312329465 577.610027136949 98.064 1.8015 98.064 96.977 98.778 0 923 150 10 0 0 0 2.0049E-10 3 55438 90.453 82.973 2 1.3091 1.7265 0 284650000 120250000 164400000 3920 925 2008 2225 6426;6427;6428 6427 250 1555 MDSNFGLAGLPGSPKK 16 2 0 Oxidation (M),Phospho (STY) _M(ox)DSNFGLAGLPGS(ph)PKK_ M(1)DSNFGLAGLPGSPKK MDSNFGLAGLPGS(1)PKK M(132.79)DSNFGLAGLPGSPKK MDS(-107.2)NFGLAGLPGS(107.2)PKK 0 1 1 1 O43463 O43463 O43463 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 865.9117 2 857.897138 1713.77972 65235.11 0.85747 0.00073563 0.043964 3.7717E-05 0.90144 0.00077334 857.897467899891 865.911418946935 98.058 1.5109 98.058 97.211 98.722 7.6294E-06 654 126 8 0 0 0 1.8749E-36 3 55806 132.79 126.76 2 1.2952 1.682 0 164150000 70904000 93246000 3921 925 2008 2225 6429;6430;6431 6431 250 1555 MDSNFGLAGLPGSPKK 16 2 0 Oxidation (M),Phospho (STY) _M(ox)DSNFGLAGLPGS(ph)PKK_ M(1)DSNFGLAGLPGSPKK MDSNFGLAGLPGS(1)PKK M(48.2)DSNFGLAGLPGSPKK MDS(-48.09)NFGLAGLPGS(48.09)PKK 0 1 1 1 O43463 O43463 O43463 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 572.2676 3 572.267184 1713.77972 78259.63 0.34239 0.00019594 0.17004 9.731E-05 0.51243 0.00029325 572.601670599902 577.61013735197 94.186 1.7731 94.186 93.323 95.096 -7.6294E-06 982 166 9 0 0 0 9.2147E-05 3 60185 48.196 42.616 2 1.4796 1.0983 0 179250000 79560000 99691000 3922 925 2008 2225 6432;6433;6434 6432 250 1555 MDSNFGLAGLPGSPKK 16 2 0 Oxidation (M),Phospho (STY) _M(ox)DSNFGLAGLPGS(ph)PKK_ M(1)DSNFGLAGLPGSPKK MDSNFGLAGLPGS(1)PKK M(58.69)DSNFGLAGLPGSPKK MDS(-54.81)NFGLAGLPGS(54.81)PKK 0 1 1 1 O43463 O43463 O43463 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 857.8979 2 857.897138 1713.77972 65290.92 0.79133 0.00067888 0.70927 0.00060848 1.5006 0.0012874 857.897644459076 865.912118917063 94.092 1.4683 94.092 93.333 94.801 0 849 137 9 0 0 0 0.0001674 2 60319 58.688 46.629 2 1.4809 1.1064 0 109980000 46133000 63851000 3923 925 2008 2225 6435;6436 6435 250 1555 MEDISPVQTDALDSVR 16 0 1 Oxidation (M),Phospho (STY) _M(ox)EDIS(ph)PVQTDALDSVR_ M(1)EDISPVQTDALDSVR MEDIS(1)PVQTDALDSVR M(86.38)EDISPVQTDALDSVR MEDIS(34.12)PVQT(-34.12)DALDS(-63.24)VR 0 1 1 0 B9EGR5;Q8IWI9 B9EGR5 B9EGR5 MGA MAX gene-associated protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 936.9136 2 936.408263 1870.80197 63596.82 0.75526 0.00070723 -0.23187 -0.00021712 0.5234 0.00049011 936.407783844187 941.411316552282 98.416 0.62617 98.416 98.095 98.721 0 221 51 5 0 0 0 2.7725E-09 3 55790 86.378 78.273 3 0.57734 0.71029 0 24334000 14690000 9644000 3924 732 2009 2226 6437;6438;6439 6439 191 1222 MEIGDTLSTAEESSPPK 17 1 0 Oxidation (M),Phospho (STY) _M(ox)EIGDTLS(ph)TAEESSPPK_ M(1)EIGDTLSTAEESSPPK MEIGDT(0.008)LS(0.437)T(0.437)AEES(0.059)S(0.059)PPK M(53.97)EIGDTLSTAEESSPPK MEIGDT(-17.12)LS(0)T(0)AEES(-8.71)S(-8.71)PPK 0 1 1 0 C9JG86;Q9BYW2 C9JG86 C9JG86 SETD2 Histone-lysine N-methyltransferase SETD2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 948.4085 2 944.400104 1886.78566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.869 1 76.869 76.369 77.369 0 0 0 0 0.00051267 1 39932 53.967 44.778 5 3925 740 2010 2227 6440 6440 195 1247;2807 MEIYRPHK 8 1 1 Oxidation (M) _M(ox)EIYRPHK_ M(1)EIYRPHK M(70.52)EIYRPHK 0 1 0 1 B3KUJ5;Q92769;E5RFI6;E5RJ04;E5RGV4;E5RHE7;E5RH52;E5RG37;E5RFP9;H3BM24;E5RK19;Q6IT96;B5BU61;Q13547;Q5TEE2;B4DSK9 B3KUJ5;Q6IT96 B3KUJ5 HDAC2;HDAC1 Histone deacetylase;Histone deacetylase 2;Histone deacetylase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 545.2797 2 545.279126 1088.5437 79791.06 0.61717 0.00033653 -0.82139 -0.00044789 -0.20422 -0.00011136 545.279067612946 554.289610126822 82.495 1.548 82.495 81.418 82.966 7.6294E-06 486 146 6 0 0 0 0.0078872 3 44061 70.525 54.052 1 1.5213 1.8091 0 72690000 31710000 40980000 3926 601;690 2011 2228 6441;6442;6443 6443 153 MELAGSNTTASSPAR 15 0 1 Oxidation (M),Phospho (STY) _M(ox)ELAGSNTTAS(ph)SPAR_ M(1)ELAGSNTTASSPAR MELAGS(0.002)NT(0.009)T(0.016)AS(0.634)S(0.338)PAR M(103.77)ELAGSNTTASSPAR MELAGS(-24.13)NT(-18.6)T(-15.94)AS(2.73)S(-2.73)PAR 0 1 1 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 799.842 2 794.837277 1587.66 67711.14 0.99379 0.0007899 0.97197 0.00077256 1.9658 0.0015625 794.837397800184 799.841492618064 27.337 0.40346 27.337 27.125 27.528 0 148 26 8 0 0 0 2.3492E-12 2 13312 103.77 87.629 5 2.4253 1.7173 0 30986000 7512900 23474000 3927 829 2012 2229 6444;6445 6444 225 1430 METEADAPSPAPSLGER 17 0 1 Oxidation (M),Phospho (STY) _M(ox)ETEADAPS(ph)PAPSLGER_ M(1)ETEADAPSPAPSLGER METEADAPS(0.966)PAPS(0.034)LGER M(215.45)ETEADAPSPAPSLGER MET(-106.31)EADAPS(14.51)PAPS(-14.51)LGER 0 1 1 0 Q12873;B4DLC6;B3KWV4;B4DKV1;Q2TAZ1 Q12873 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 927.3854 2 927.384788 1852.75502 62786.85 0.52743 0.00048913 -0.23717 -0.00021995 0.29026 0.00026918 927.384825775084 932.388688407036 65.94 1.0063 65.94 65.339 66.345 0 510 77 9 0 0 0 7.4621E-152 3 31779 215.45 190.6 3 0.56874 0.71837 0 122330000 76079000 46251000 3928 1045 2013 2230 6446;6447;6448 6447 299 1952 METEADAPSPAPSLGER 17 0 1 Oxidation (M),Phospho (STY) _M(ox)ETEADAPS(ph)PAPSLGER_ M(1)ETEADAPSPAPSLGER METEADAPS(0.858)PAPS(0.142)LGER M(55.3)ETEADAPSPAPSLGER MET(-34.34)EADAPS(7.82)PAPS(-7.82)LGER 0 1 1 0 Q12873;B4DLC6;B3KWV4;B4DKV1;Q2TAZ1 Q12873 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 927.3865 2 927.384788 1852.75502 62886.79 0.95542 0.00088605 -0.22621 -0.00020978 0.72921 0.00067626 927.886247116367 932.388948872425 64.98 1.1409 64.98 64.448 65.589 0 707 103 10 0 0 0 5.8819E-05 2 40349 55.297 49.598 3 1.7214 1.1516 0 126520000 44388000 82136000 3929 1045 2013 2230 6449;6450 6449 299 1952 MEVAEPSSPTEEEEEEEEHSAEPRPR 26 0 2 Acetyl (Protein N-term),Oxidation (M),Phospho (STY) _(ac)M(ox)EVAEPSS(ph)PTEEEEEEEEHSAEPRPR_ M(1)EVAEPSSPTEEEEEEEEHSAEPRPR MEVAEPS(0.146)S(0.597)PT(0.129)EEEEEEEEHS(0.129)AEPRPR M(42.04)EVAEPSSPTEEEEEEEEHSAEPRPR MEVAEPS(-6.12)S(6.12)PT(-6.66)EEEEEEEEHS(-6.66)AEPRPR 1 1 1 1 M0R3H9;M0QXG9;M0R3F4;M0R2A4;M0R2K3;M0R193;M0R0I0;J3KQS6;A0A024R7L2;Q9NWV8 M0R3H9 M0R3H9 BABAM1;HSPC142 BRISC and BRCA1-A complex member 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1057.4327 3 1050.0906 3147.24998 61375.28 0.34012 0.00035715 0.043173 4.5335E-05 0.38329 0.00040249 1050.42503634444 1057.09727444707 73.094 0.66546 73.094 72.737 73.402 -7.6294E-06 304 58 8 0 0 0 1.3357E-06 1 37285 42.039 37.887 4 0.84881 1.0529 0 42667000 25458000 17209000 3930 137 2014 2231 6451 6451 29 208 MEVSPLQPVNENMQVNK 17 1 0 2 Oxidation (M),Phospho (STY) _M(ox)EVS(ph)PLQPVNENM(ox)QVNK_ M(1)EVSPLQPVNENM(1)QVNK MEVS(1)PLQPVNENMQVNK M(103.5)EVSPLQPVNENM(103.5)QVNK MEVS(103.5)PLQPVNENMQVNK 0 2 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1038.9652 2 1034.9576 2067.90064 58742.03 0.54295 0.00056193 0.21436 0.00022186 0.75732 0.00078379 1035.45927813251 1038.96470474657 74.337 1.3355 74.337 73.862 75.198 -7.6294E-06 580 116 8 0 0 0 9.8668E-17 2 38218 103.5 93.578 1 1.1525 1.4335 0 82104000 33785000 48319000 3931 962 2015 2232 6452;6453 6453 264;270 1688 MEVSPLQPVNENMQVNK 17 1 0 2 Oxidation (M),Phospho (STY) _M(ox)EVS(ph)PLQPVNENM(ox)QVNK_ M(1)EVSPLQPVNENM(1)QVNK MEVS(1)PLQPVNENMQVNK M(43.79)EVSPLQPVNENM(43.79)QVNK MEVS(43.79)PLQPVNENMQVNK 0 2 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1035.4609 2 1034.9576 2067.90064 58489.75 0.60009 0.00062107 0.30095 0.00031147 0.90104 0.00093254 1034.95801143189 1038.96529262396 76.304 1.0509 76.304 75.782 76.833 0 761 97 11 0 0 0 0.00012629 1 48558 43.791 33.324 1 0.94038 0.62865 0 147290000 77737000 69551000 3932 962 2015 2232 6454 6454 264;270 1688 MEVSPLQPVNENMQVNK 17 1 0 Acetyl (Protein N-term),2 Oxidation (M),Phospho (STY) _(ac)M(ox)EVS(ph)PLQPVNENM(ox)QVNK_ M(1)EVSPLQPVNENM(1)QVNK MEVS(1)PLQPVNENMQVNK M(96.41)EVSPLQPVNENM(96.41)QVNK MEVS(96.41)PLQPVNENMQVNK 1 2 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1060.473 2 1055.96288 2109.91121 58182.36 0.42961 0.00045365 -0.28497 -0.00030092 0.14463 0.00015273 1056.46453669518 1059.97022020991 89.018 1.5333 89.018 88.361 89.894 0 1250 136 12 0 0 0 6.5222E-13 4 48928 96.414 96.414 1 1.2325 1.5169 0 2935600000 1317500000 1618100000 3933 962 2015 2233 6455;6456;6457;6458 6458 264;270 1688 MEVSPLQPVNENMQVNK 17 1 0 Acetyl (Protein N-term),2 Oxidation (M),Phospho (STY) _(ac)M(ox)EVS(ph)PLQPVNENM(ox)QVNK_ M(1)EVSPLQPVNENM(1)QVNK MEVS(1)PLQPVNENMQVNK M(62.1)EVSPLQPVNENM(62.1)QVNK MEVS(62.1)PLQPVNENMQVNK 1 2 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1056.4655 2 1055.96288 2109.91121 57360.81 0.76009 0.00080263 0.98314 0.0010382 1.7432 0.0018408 1056.46525137136 1059.97159003569 98.554 2.1438 98.554 97.662 99.806 0 884 200 5 0 0 0 9.7429E-06 1 63603 62.104 62.104 1 0.91413 0.60977 0 556480000 358990000 197490000 3934 962 2015 2233 6459 6459 264;270 1688 MEVSPLQPVNENMQVNK 17 1 0 Acetyl (Protein N-term),2 Oxidation (M) _(ac)M(ox)EVSPLQPVNENM(ox)QVNK_ M(1)EVSPLQPVNENM(1)QVNK M(45.08)EVSPLQPVNENM(45.08)QVNK 1 2 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1015.9813 2 1015.97971 2029.94488 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.637 1 73.637 73.137 74.137 0 0 0 0 0.00084822 1 37576 45.077 15.27 1 3935 962 2015 2234 6460 6460 264;270 MEVSPLQPVNENMQVNK 17 1 0 Acetyl (Protein N-term),2 Oxidation (M) _(ac)M(ox)EVSPLQPVNENM(ox)QVNK_ M(1)EVSPLQPVNENM(1)QVNK M(60.26)EVSPLQPVNENM(60.26)QVNK 1 2 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1020.0781 2 1015.97971 2029.94488 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.698 1 73.698 73.198 74.198 0 0 0 0 8.4805E-05 1 37615 60.255 17.446 1 3936 962 2015 2234 6461 6461 264;270 MEVSPLQPVNENMQVNK 17 1 0 Acetyl (Protein N-term),Oxidation (M),Phospho (STY) _(ac)M(ox)EVS(ph)PLQPVNENMQVNK_ M(1)EVSPLQPVNENMQVNK MEVS(1)PLQPVNENMQVNK M(54.6)EVSPLQPVNENM(-54.6)QVNK MEVS(60.55)PLQPVNENMQVNK 1 1 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1048.4678 2 1047.96542 2093.91629 57790.54 0.78359 0.00082118 -0.036811 -3.8577E-05 0.74678 0.0007826 1048.46734080359 1051.97278791257 115.14 1.0303 115.14 114.69 115.72 -7.6294E-06 811 91 12 0 0 0 1.3002E-05 1 74116 60.549 52.361 2 1.4476 0.96626 0 368270000 153180000 215090000 3937 962 2015 2235 6462 6462 264;270 1688 MEVSPLQPVNENMQVNK 17 1 0 Acetyl (Protein N-term),Oxidation (M),Phospho (STY) _(ac)MEVS(ph)PLQPVNENM(ox)QVNK_ MEVSPLQPVNENM(1)QVNK MEVS(1)PLQPVNENMQVNK M(-83.56)EVSPLQPVNENM(83.56)QVNK MEVS(86.87)PLQPVNENMQVNK 1 1 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1048.4689 2 1047.96542 2093.91629 NaN NaN NaN 0.88436 0.00092678 NaN NaN NaN NaN 120.93 1.0553 120.93 120.55 121.6 0 0 0 0 1.2612E-10 1 77966 86.873 73.643 2 NaN NaN 0 139300000 139300000 0 3938 962 2015 2235 6463 6463 264;270 1688 MGSDEFDISPR 11 0 1 Oxidation (M),Phospho (STY) _M(ox)GSDEFDIS(ph)PR_ M(1)GSDEFDISPR MGSDEFDIS(1)PR M(116.9)GSDEFDISPR MGS(-84.85)DEFDIS(84.85)PR 0 1 1 0 B9EGR5;Q8IWI9 B9EGR5 B9EGR5 MGA MAX gene-associated protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 680.2601 2 675.2576 1348.50065 76610.91 0.749 0.00050577 -0.88507 -0.00059765 -0.13607 -9.1881E-05 675.25747834202 680.260147100083 80.295 1.2931 80.295 79.542 80.836 0 338 120 4 0 0 0 2.968E-09 2 42317 116.9 103.22 2 0.46027 0.57878 0 43367000 29837000 13530000 3939 732 2016 2236 6464;6465 6464 190 1220;1221 MGSDEFDISPR 11 0 1 Oxidation (M),Phospho (STY) _M(ox)GSDEFDIS(ph)PR_ M(1)GSDEFDISPR MGSDEFDIS(1)PR M(113.8)GSDEFDISPR MGS(-80.94)DEFDIS(80.94)PR 0 1 1 0 B9EGR5;Q8IWI9 B9EGR5 B9EGR5 MGA MAX gene-associated protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 680.2623 2 675.2576 1348.50065 74614.01 1.0087 0.00068113 -0.094189 -6.3602E-05 0.9145 0.00061752 675.257654486415 680.261685816701 81.564 0.88622 81.564 81.139 82.025 0 426 82 7 0 0 0 6.0643E-09 2 52069 113.8 108.8 2 1.1426 0.80427 0 32689000 15606000 17083000 3940 732 2016 2236 6466;6467 6467 190 1220;1221 MGSSLVIEISEEEVNK 16 1 0 Oxidation (M) _M(ox)GSSLVIEISEEEVNK_ M(1)GSSLVIEISEEEVNK M(43.54)GSSLVIEISEEEVNK 0 1 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 890.4396 2 890.437674 1778.8608 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.1 1 112.1 111.6 112.6 0 0 0 0 0.0027856 1 66462 43.544 27.011 1 3941 1220 2017 2237 6468 6468 344 MHDLNTDQENLVGTHDAPIR 20 0 1 Oxidation (M) _M(ox)HDLNTDQENLVGTHDAPIR_ M(1)HDLNTDQENLVGTHDAPIR M(47.09)HDLNTDQENLVGTHDAPIR 0 1 0 0 J3QSX4;B4DDM6;J3QT28;A0A140VJF3;O43684 J3QSX4 J3QSX4 BUB3 Mitotic checkpoint protein BUB3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 768.0325 3 764.693962 2291.06006 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.2 1 108.2 107.7 108.7 0 0 0 0 0.00043031 1 63374 47.09 33.664 1 3942 376 2018 2238 6469 6469 91 MHRDSCPLDCK 11 1 1 Acetyl (Protein N-term),Oxidation (M),Phospho (STY) _(ac)M(ox)HRDS(ph)CPLDCK_ M(1)HRDSCPLDCK MHRDS(1)CPLDCK M(50.1)HRDSCPLDCK MHRDS(50.1)CPLDCK 1 1 1 1 A0A087X2D0;B2R6F3;P84103 A0A087X2D0 A0A087X2D0 SRSF3;SFRS3 Serine/arginine-rich splicing factor 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 778.7881 2 778.788218 1555.56188 68697.3 0.32937 0.00025651 0.21843 0.00017011 0.5478 0.00042662 778.788637053442 787.800133776372 23.321 0.36695 23.321 23.153 23.52 -1.9073E-06 99 20 8 0 0 0 0.0022 1 9847 50.102 34.53 1 0.49998 0.38164 0 20934000 13198000 7736100 3943 276 2019 2239 6470 6470 68 438 MIGFPSSAGSVSPR 14 0 1 Oxidation (M),Phospho (STY) _M(ox)IGFPSS(ph)AGSVSPR_ M(1)IGFPSSAGSVSPR MIGFPS(0.077)S(0.308)AGS(0.308)VS(0.308)PR M(58.1)IGFPSSAGSVSPR MIGFPS(-6.03)S(0)AGS(0)VS(0)PR 0 1 1 0 CON__P13646-1;A8K2H9;A1A4E9;P13646 CON__P13646-1 CON__P13646-1 KRT13 Keratin, type I cytoskeletal 13 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 744.832 2 744.831266 1487.64798 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.019 1 88.019 87.519 88.519 0 0 0 0 4.5502E-05 1 47973 58.098 36.635 4 + 3944 401 2020 2240 6471 6471 101 688;689;690 MKEPSSPPPAPTSSTFGLQDGNLR 24 1 1 Oxidation (M),Phospho (STY) _M(ox)KEPS(ph)SPPPAPTSSTFGLQDGNLR_ M(1)KEPSSPPPAPTSSTFGLQDGNLR MKEPS(0.497)S(0.497)PPPAPT(0.003)S(0.001)S(0.001)TFGLQDGNLR M(45.97)KEPSSPPPAPTSSTFGLQDGNLR MKEPS(0)S(0)PPPAPT(-21.9)S(-26.48)S(-25.99)T(-30.29)FGLQDGNLR 0 1 1 1 J3QTB2;J3QTA6;Q9BRQ6 J3QTB2 J3QTB2 CHCHD6 MICOS complex subunit MIC25 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 877.0763 3 870.735037 2609.18328 NaN NaN NaN 1.2443 0.0010835 NaN NaN NaN NaN 99.503 0.39052 99.503 99.252 99.643 7.6294E-06 0 0 0 0.0002072 2 56835 45.972 39.202 6 NaN NaN 0 13043000 0 13043000 3945 899 2021 2241 6472;6473 6473 248 1525;1526 MKLPEHPEGGEPEDDEAPAK 20 2 0 Oxidation (M) _M(ox)KLPEHPEGGEPEDDEAPAK_ M(1)KLPEHPEGGEPEDDEAPAK M(99.06)KLPEHPEGGEPEDDEAPAK 0 1 0 1 Q9NX58;A8K3Y5 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 731.6671 3 731.331919 2190.97393 70802.11 0.95325 0.00069714 -0.1212 -8.864E-05 0.83204 0.0006085 731.331701727647 737.344043929488 78.356 1.1529 78.356 77.697 78.85 0 578 104 8 0 0 0 7.2998E-18 3 40917 99.059 89.776 1 1.2233 1.5588 0 83749000 47313000 36436000 3946 1222 2022 2242 6474;6475;6476 6475 349 MKLPEHPEGGEPEDDEAPAK 20 2 0 Oxidation (M) _M(ox)KLPEHPEGGEPEDDEAPAK_ M(1)KLPEHPEGGEPEDDEAPAK M(71.07)KLPEHPEGGEPEDDEAPAK 0 1 0 1 Q9NX58;A8K3Y5 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 552.7579 4 548.750758 2190.97393 81188.23 0.58743 0.00032235 -0.22497 -0.00012345 0.36246 0.0001989 549.001374684893 552.757844607778 78.378 0.72122 78.378 77.996 78.717 0 297 64 7 0 0 0 2.653E-09 1 41031 71.073 64.275 1 1.1502 1.4464 0 52244000 22182000 30062000 3947 1222 2022 2242 6477 6477 349 MKPILLQGHER 11 1 1 Oxidation (M) _M(ox)KPILLQGHER_ M(1)KPILLQGHER M(40.45)KPILLQGHER 0 1 0 1 Q5TFK1;Q5U0F4;Q53HU7;Q13347 Q5TFK1 Q5TFK1 EIF3I Eukaryotic translation initiation factor 3 subunit I ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 452.5909 3 446.583456 1336.72854 NaN NaN NaN -0.35071 -0.00015662 NaN NaN NaN NaN 110.33 0.64015 110.33 109.92 110.56 0 0 0 0 0.015746 1 64815 40.449 29.23 1 NaN NaN 0 12018000 0 12018000 3948 1050 2023 2243 6478 6478 301 MLDHEYTTK 9 1 0 Oxidation (M) _M(ox)LDHEYTTK_ M(1)LDHEYTTK M(139.74)LDHEYTTK 0 1 0 0 B9EG90;P11387;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;E5RJ33;H0YBR3;H0YC03;E5RGE7;E5RGR4;E5RFE3;E5RGR2;E5RJ95;E5RFS0;D3DWJ7;E5RIC7 B9EG90 B9EG90 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 577.2636 2 577.263339 1152.51212 78955.45 0.64327 0.00037134 -0.034643 -1.9998E-05 0.60863 0.00035134 577.263396646038 581.270322267333 64.201 0.63346 64.201 64.038 64.671 0 200 44 6 0 0 0 2.0457E-13 2 30475 139.74 104.29 1 1.491 1.8518 0 98008000 39266000 58742000 3949 729 2024 2244 6479;6480 6480 189 MLDHEYTTK 9 1 0 Oxidation (M) _M(ox)LDHEYTTK_ M(1)LDHEYTTK M(64.71)LDHEYTTK 0 1 0 0 B9EG90;P11387;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;E5RJ33;H0YBR3;H0YC03;E5RGE7;E5RGR4;E5RFE3;E5RGR2;E5RJ95;E5RFS0;D3DWJ7;E5RIC7 B9EG90 B9EG90 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 385.1781 3 385.177985 1152.51212 95875.48 -0.075327 -2.9014E-05 0.71925 0.00027704 0.64393 0.00024803 385.178138588335 387.849663891548 64.218 0.55486 64.218 64.063 64.618 0 165 38 6 0 0 0 0.0020211 2 30563 64.711 47.784 1 1.6477 2.0615 0 63213000 25014000 38198000 3950 729 2024 2244 6481;6482 6482 189 MLEPPPSAKPFTIDVDK 17 2 0 Oxidation (M),Phospho (STY) _M(ox)LEPPPS(ph)AKPFTIDVDK_ M(1)LEPPPSAKPFTIDVDK MLEPPPS(0.968)AKPFT(0.032)IDVDK M(73.78)LEPPPSAKPFTIDVDK MLEPPPS(14.79)AKPFT(-14.79)IDVDK 0 1 1 1 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 661.3185 3 660.984454 1979.93153 76404.65 1.1522 0.00076161 -0.2624 -0.00017344 0.88983 0.00058817 660.984592194734 666.327580666709 105.1 0.58292 105.1 104.8 105.38 0 188 40 8 0 0 0 6.2868E-07 1 60830 73.783 55.246 2 0.84663 0.96266 0 18381000 9367300 9014000 3951 943 2025 2245 6483 6483 258 1621 MLESGLPEMNDPYVLSPEDDDDHQK 25 1 0 2 Oxidation (M),Phospho (STY) _M(ox)LESGLPEM(ox)NDPYVLS(ph)PEDDDDHQK_ M(1)LESGLPEM(1)NDPYVLSPEDDDDHQK MLESGLPEMNDPY(0.018)VLS(0.982)PEDDDDHQK M(65.9)LESGLPEM(65.9)NDPYVLSPEDDDDHQK MLES(-42.46)GLPEMNDPY(-17.41)VLS(17.41)PEDDDDHQK 0 2 1 0 A9X425;A9X424;F5H8L7;E9PHB3;B4DQU6;D3DUR9;Q8TF68 A9X425 A9X425 ZNF384 Zinc finger protein 384 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 999.0786 3 996.071715 2985.19331 60945.57 0.81704 0.00081383 -0.27944 -0.00027835 0.53759 0.00053548 996.739933169901 999.077468952436 99.331 0.84464 99.331 98.993 99.838 0 397 73 7 0 0 0 2.2473E-17 1 56725 65.899 59.25 3 1.417 1.7628 0 79657000 34642000 45016000 3952 513 2026 2246 6484 6484 133;134 879 MLPHAPGVQMQAIPEDAIPEESGDEDEDDPDKR 33 1 1 2 Oxidation (M),Phospho (STY) _M(ox)LPHAPGVQM(ox)QAIPEDAIPEES(ph)GDEDEDDPDKR_ M(1)LPHAPGVQM(1)QAIPEDAIPEESGDEDEDDPDKR MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR M(43.57)LPHAPGVQM(43.57)QAIPEDAIPEESGDEDEDDPDKR MLPHAPGVQMQAIPEDAIPEES(43.57)GDEDEDDPDKR 0 2 1 1 Q6IT96;B5BU61;Q13547;B4DRG0;Q5HYD4 Q6IT96 Q6IT96 HDAC1;DKFZp686H12203 Histone deacetylase;Histone deacetylase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 937.1495 4 936.648572 3742.56518 62579.51 1.4429 0.0013515 -0.010918 -1.0226E-05 1.432 0.0013413 936.898472657326 941.655764592667 102.04 1.2456 102.04 101.44 102.69 0 663 100 10 0 0 0 3.4732E-08 1 58579 43.566 36.807 1 1.0447 1.2365 0 50704000 23631000 27073000 3953 690 2027 2247 6485 6485 181;182 1137 MLPHAPGVQMQAIPEDAIPEESGDEDEDDPDKR 33 1 1 2 Oxidation (M),Phospho (STY) _M(ox)LPHAPGVQM(ox)QAIPEDAIPEES(ph)GDEDEDDPDKR_ M(1)LPHAPGVQM(1)QAIPEDAIPEESGDEDEDDPDKR MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR M(40.84)LPHAPGVQM(40.84)QAIPEDAIPEESGDEDEDDPDKR MLPHAPGVQMQAIPEDAIPEES(40.84)GDEDEDDPDKR 0 2 1 1 Q6IT96;B5BU61;Q13547;B4DRG0;Q5HYD4 Q6IT96 Q6IT96 HDAC1;DKFZp686H12203 Histone deacetylase;Histone deacetylase 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 937.1505 4 936.648572 3742.56518 62087.6 0.85049 0.00079661 0.035674 3.3414E-05 0.88617 0.00083003 936.899448141075 941.405754741487 97.249 1.4537 97.249 96.718 98.172 0 1328 136 15 0 0 0 1.4102E-07 1 62387 40.837 29.749 1 0.88403 0.68278 0 135180000 70746000 64430000 3954 690 2027 2247 6486 6486 181;182 1137 MLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDK 32 1 0 2 Oxidation (M),Phospho (STY) _M(ox)LPHAPGVQM(ox)QAIPEDAVHEDS(ph)GDEDGEDPDK_ M(1)LPHAPGVQM(1)QAIPEDAVHEDSGDEDGEDPDK MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDK M(61.03)LPHAPGVQM(61.03)QAIPEDAVHEDSGDEDGEDPDK MLPHAPGVQMQAIPEDAVHEDS(61.03)GDEDGEDPDK 0 2 1 0 B3KUJ5;Q92769;Q59GB9 B3KUJ5 B3KUJ5 HDAC2 Histone deacetylase;Histone deacetylase 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1184.1593 3 1181.15176 3540.43344 55269.99 0.77852 0.00091954 0.0020005 2.3629E-06 0.78052 0.00092191 1181.82043492451 1184.49159915684 91.142 1.8055 91.142 90.422 92.227 0 1535 156 15 0 0 0 8.3768E-18 2 49966 61.03 51.729 1 1.0584 1.3062 0 802820000 403690000 399140000 3955 601 2028 2248 6487;6488 6488 154;155 988 MLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDK 32 1 0 2 Oxidation (M),Phospho (STY) _M(ox)LPHAPGVQM(ox)QAIPEDAVHEDS(ph)GDEDGEDPDK_ M(1)LPHAPGVQM(1)QAIPEDAVHEDSGDEDGEDPDK MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDK M(69.75)LPHAPGVQM(69.75)QAIPEDAVHEDSGDEDGEDPDK MLPHAPGVQMQAIPEDAVHEDS(69.75)GDEDGEDPDK 0 2 1 0 B3KUJ5;Q92769;Q59GB9 B3KUJ5 B3KUJ5 HDAC2 Histone deacetylase;Histone deacetylase 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 886.3676 4 886.115636 3540.43344 63820.02 1.2905 0.0011435 -0.1458 -0.00012919 1.1447 0.0010143 886.617002327867 888.370216021051 91.334 1.7841 91.334 90.377 92.161 7.6294E-06 1571 154 15 0 0 0 3.6219E-24 2 49980 69.755 63.575 1 1.0593 1.3084 0 577790000 279900000 297880000 3956 601 2028 2248 6489;6490 6489 154;155 988 MLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDK 32 1 0 2 Oxidation (M),Phospho (STY) _M(ox)LPHAPGVQM(ox)QAIPEDAVHEDS(ph)GDEDGEDPDK_ M(1)LPHAPGVQM(1)QAIPEDAVHEDSGDEDGEDPDK MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDK M(80.14)LPHAPGVQM(80.14)QAIPEDAVHEDSGDEDGEDPDK MLPHAPGVQMQAIPEDAVHEDS(80.14)GDEDGEDPDK 0 2 1 0 B3KUJ5;Q92769;Q59GB9 B3KUJ5 B3KUJ5 HDAC2 Histone deacetylase;Histone deacetylase 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 886.6174 4 886.115636 3540.43344 64144.18 0.88511 0.00078431 -0.077949 -6.9072E-05 0.80716 0.00071524 886.36660880509 888.370124774755 84.522 1.2201 84.522 84.026 85.246 0 1179 110 15 0 0 0 5.9613E-31 2 54498 80.139 75.849 1 0.86425 0.5776 0 173470000 102890000 70580000 3957 601 2028 2248 6491;6492 6492 154;155 988 MLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDK 32 1 0 2 Oxidation (M),Phospho (STY) _M(ox)LPHAPGVQM(ox)QAIPEDAVHEDS(ph)GDEDGEDPDK_ M(1)LPHAPGVQM(1)QAIPEDAVHEDSGDEDGEDPDK MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDK M(71.66)LPHAPGVQM(71.66)QAIPEDAVHEDSGDEDGEDPDK MLPHAPGVQMQAIPEDAVHEDS(71.66)GDEDGEDPDK 0 2 1 0 B3KUJ5;Q92769;Q59GB9 B3KUJ5 B3KUJ5 HDAC2 Histone deacetylase;Histone deacetylase 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1184.4916 3 1181.15176 3540.43344 54865.34 0.36209 0.00042769 -0.11664 -0.00013777 0.24545 0.00028991 1181.8203880096 1184.49108999816 84.565 1.2642 84.565 84.035 85.299 0 1231 114 14 0 0 0 1.4089E-24 1 54160 71.656 65.562 1 0.93641 0.62538 0 268730000 138710000 130020000 3958 601 2028 2248 6493 6493 154;155 988 MLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDK 32 1 0 Oxidation (M),Phospho (STY) _M(ox)LPHAPGVQMQAIPEDAVHEDS(ph)GDEDGEDPDK_ M(0.993)LPHAPGVQM(0.007)QAIPEDAVHEDSGDEDGEDPDK MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDK M(21.65)LPHAPGVQM(-21.65)QAIPEDAVHEDSGDEDGEDPDK MLPHAPGVQMQAIPEDAVHEDS(44.32)GDEDGEDPDK 0 1 1 0 B3KUJ5;Q92769;Q59GB9 B3KUJ5 B3KUJ5 HDAC2 Histone deacetylase;Histone deacetylase 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 884.6226 4 882.116907 3524.43852 63474.87 1.0939 0.00096498 0.031255 2.757E-05 1.1252 0.00099255 882.618778843011 884.621868240514 100.43 1.0123 100.43 99.897 100.91 0 515 96 8 0 0 0 3.5952E-09 1 64486 44.319 42.116 2 1.1935 0.79398 0 28663000 12601000 16062000 3959 601 2028 2249 6494 6494 154;155 988 MLQPSSSPLWGK 12 1 0 Oxidation (M),Phospho (STY) _M(ox)LQPS(ph)SSPLWGK_ M(1)LQPSSSPLWGK MLQPS(0.333)S(0.333)S(0.333)PLWGK M(57.84)LQPSSSPLWGK MLQPS(0)S(0)S(0)PLWGK 0 1 1 0 Q9Y3T9;Q9H9J5;B3KNC3 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 717.8327 2 713.825453 1425.63635 72421.02 1.2364 0.00088258 -0.28308 -0.00020207 0.95333 0.00068051 713.824811134546 717.83210816773 93.069 0.76645 93.069 92.548 93.314 0 172 64 4 0 0 0 0.0066641 2 51517 57.836 16.553 3 1.161 1.4273 0 22363000 8828200 13534000 3960 1252 2029 2250 6495;6496 6496 362 2577;2578;2579 MNEEISSDSESESLAPR 17 0 1 Oxidation (M),Phospho (STY) _M(ox)NEEISS(ph)DSESESLAPR_ M(1)NEEISSDSESESLAPR MNEEIS(0.038)S(0.906)DS(0.038)ES(0.017)ES(0.001)LAPR M(172.91)NEEISSDSESESLAPR MNEEIS(-13.74)S(13.74)DS(-13.74)ES(-17.34)ES(-31.06)LAPR 0 1 1 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 989.3965 2 988.893174 1975.7718 61348.94 0.33195 0.00032827 0.049397 4.8849E-05 0.38135 0.00037712 989.394972042497 993.897265831661 66.936 1.3048 66.936 66.281 67.586 0 567 101 7 0 0 0 1.5594E-73 3 32551 172.91 163.13 5 1.2578 1.5882 0 101290000 41848000 59439000 3961 928 2030 2251 6497;6498;6499 6497 251 1569;1570;1571 MNEEISSDSESESLAPR 17 0 1 Oxidation (M),Phospho (STY) _M(ox)NEEISS(ph)DSESESLAPR_ M(1)NEEISSDSESESLAPR MNEEIS(0.022)S(0.478)DS(0.478)ES(0.022)ES(0.001)LAPR M(89.36)NEEISSDSESESLAPR MNEEIS(-13.45)S(0)DS(0)ES(-13.45)ES(-26.5)LAPR 0 1 1 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 993.8986 2 988.893174 1975.7718 60702.71 0.56996 0.00056363 0.30521 0.00030182 0.87517 0.00086545 988.893736093362 993.897785532574 67.001 1.5638 67.001 66.504 68.067 0 1090 141 10 0 0 0 5.852E-10 4 42141 89.358 85.344 5 1.0571 0.70385 0 160470000 82855000 77614000 3962 928 2030 2251 6500;6501;6502;6503 6500 251 1569;1570;1571 MNEEISSDSESESLAPR 17 0 1 Oxidation (M),2 Phospho (STY) _M(ox)NEEIS(ph)S(ph)DSESESLAPR_ M(1)NEEISSDSESESLAPR MNEEIS(0.993)S(0.98)DS(0.027)ES(0.001)ESLAPR M(135.55)NEEISSDSESESLAPR MNEEIS(21.28)S(17.05)DS(-17.05)ES(-33.19)ES(-46.05)LAPR 0 1 2 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1033.8802 2 1028.87634 2055.73813 60767.43 0.39471 0.00040611 -0.34637 -0.00035638 0.048338 4.9734E-05 1028.87554819342 1033.8802369188 70.285 1.6487 70.285 69.265 70.914 0 802 160 7 0 0 0 2.0265E-37 4 34944 135.55 126.82 10 1.0909 1.3776 0 109020000 53049000 55974000 3963 928 2030 2252 6504;6505;6506;6507 6505 251 1569;1570;1571 MNEEISSDSESESLAPR 17 0 1 Oxidation (M),2 Phospho (STY) _M(ox)NEEIS(ph)S(ph)DSESESLAPR_ M(1)NEEISSDSESESLAPR MNEEIS(0.843)S(0.495)DS(0.495)ES(0.152)ES(0.016)LAPR M(52.07)NEEISSDSESESLAPR MNEEIS(5.91)S(0)DS(0)ES(-5.91)ES(-16.48)LAPR 0 1 2 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1033.8804 2 1028.87634 2055.73813 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.245 1 69.245 68.745 69.745 0 0 0 0 0.00025453 1 34458 52.071 45.013 10 3964 928 2030 2252 6508 6508 251 1569;1570;1571 MNEEISSDSESESLAPR 17 0 1 Oxidation (M),2 Phospho (STY) _M(ox)NEEISS(ph)DS(ph)ESESLAPR_ M(1)NEEISSDSESESLAPR MNEEIS(0.204)S(0.82)DS(0.762)ES(0.166)ES(0.048)LAPR M(83.89)NEEISSDSESESLAPR MNEEIS(-7.18)S(7.18)DS(7.31)ES(-7.31)ES(-13.09)LAPR 0 1 2 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1028.8778 2 1028.87634 2055.73813 59079.22 0.57293 0.00058948 0.22755 0.00023412 0.80048 0.00082359 1028.87629815613 1033.88068461086 76.794 1.9575 76.794 76.273 78.23 7.6294E-06 791 184 9 0 0 0 1.4187E-09 2 49310 83.894 77.196 10 0.94668 0.63722 0 93282000 45039000 48243000 3965 928 2030 2252 6509;6510 6510 251 1569;1570;1571 MNEEISSDSESESLAPR 17 0 1 Oxidation (M),3 Phospho (STY) _M(ox)NEEIS(ph)S(ph)DS(ph)ESESLAPR_ M(1)NEEISSDSESESLAPR MNEEIS(0.821)S(0.821)DS(0.821)ES(0.389)ES(0.148)LAPR M(43.38)NEEISSDSESESLAPR MNEEIS(7.1)S(7.1)DS(7.1)ES(-7.1)ES(-13.38)LAPR 0 1 3 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1073.8641 2 1068.8595 2135.70446 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.849 1 72.849 72.349 73.349 0 0 0 0 0.00074479 1 36989 43.382 37.659 10 3966 928 2030 2253 6511 6511 251 1569;1570;1571 MNEEISSDSESESLAPR 17 0 1 Oxidation (M),3 Phospho (STY) _M(ox)NEEIS(ph)S(ph)DS(ph)ESESLAPR_ M(1)NEEISSDSESESLAPR MNEEIS(1)S(1)DS(0.972)ES(0.027)ES(0.001)LAPR M(132.51)NEEISSDSESESLAPR MNEEIS(39.65)S(39.65)DS(15.56)ES(-15.56)ES(-30.62)LAPR 0 1 3 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1068.8597 2 1068.8595 2135.70446 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.643 1 73.643 73.143 74.143 0 0 0 0 1.0842E-19 1 37583 132.51 116.02 10 3967 928 2030 2253 6512 6512 251 1569;1570;1571 MNEEISSDSESESLAPR 17 0 1 Oxidation (M),3 Phospho (STY) _M(ox)NEEIS(ph)S(ph)DS(ph)ESESLAPR_ M(1)NEEISSDSESESLAPR MNEEIS(0.991)S(0.991)DS(0.951)ES(0.059)ES(0.007)LAPR M(62.2)NEEISSDSESESLAPR MNEEIS(21.44)S(21.44)DS(13.3)ES(-13.3)ES(-24.15)LAPR 0 1 3 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1068.86 2 1068.8595 2135.70446 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.254 1 84.254 83.754 84.754 -7.6294E-06 0 0 0 2.1561E-05 1 54066 62.203 53.384 10 3968 928 2030 2253 6513 6513 251 1569;1570;1571 MNEEISSDSESESLAPR 17 0 1 Oxidation (M),3 Phospho (STY) _M(ox)NEEIS(ph)S(ph)DS(ph)ESESLAPR_ M(1)NEEISSDSESESLAPR MNEEIS(0.764)S(0.764)DS(0.764)ES(0.481)ES(0.226)LAPR M(55.98)NEEISSDSESESLAPR MNEEIS(5.19)S(5.19)DS(5.19)ES(-5.19)ES(-10.32)LAPR 0 1 3 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1073.865 2 1068.8595 2135.70446 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.694 1 84.694 84.194 85.194 0 0 0 0 0.00012456 1 54343 55.98 46.021 10 3969 928 2030 2253 6514 6514 251 1569;1570;1571 MNVEEDVQEEQSK 13 1 0 Oxidation (M),Phospho (STY) _M(ox)NVEEDVQEEQS(ph)K_ M(1)NVEEDVQEEQSK MNVEEDVQEEQS(1)K M(65.29)NVEEDVQEEQSK MNVEEDVQEEQS(65.29)K 0 1 1 0 E9PFK5;A8KA74;P78316;Q96GC8 E9PFK5 E9PFK5 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 834.8323 2 830.824032 1659.63351 68129.16 0.80449 0.00066839 0.043099 3.5808E-05 0.84759 0.0007042 830.824136928048 834.83108251785 44.542 0.84938 44.542 44.078 44.927 0 255 61 6 0 0 0 0.0031397 2 16443 65.295 42.717 1 0.81484 0.96432 0 4185000 2345400 1839600 3970 507 2031 2254 6515;6516 6515 131 873 MPCESSPPESADTPTSTR 18 0 1 Oxidation (M),Phospho (STY) _M(ox)PCESS(ph)PPESADTPTSTR_ M(1)PCESSPPESADTPTSTR MPCES(0.026)S(0.974)PPESADTPTSTR M(229.16)PCESSPPESADTPTSTR MPCES(-15.67)S(15.67)PPES(-85.48)ADT(-109.7)PT(-115.68)S(-115.68)T(-122.78)R 0 1 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1023.3973 2 1023.39503 2044.7755 59645.01 0.39739 0.00040668 -0.11475 -0.00011744 0.28263 0.00028925 1023.89718566831 1028.39958643299 43.095 3.1597 43.095 41.804 44.964 0 1756 234 15 0 0 0 2.7745E-174 5 15522 229.16 219.1 7 1.8346 2.3221 0 406040000 145580000 260460000 3971 994 2032 2255 6517;6518;6519;6520;6521 6518 284 1790;1791 MPCESSPPESADTPTSTR 18 0 1 Oxidation (M),Phospho (STY) _M(ox)PCES(ph)SPPESADTPTSTR_ M(1)PCESSPPESADTPTSTR MPCES(0.498)S(0.498)PPES(0.002)ADTPTSTR M(41.86)PCESSPPESADTPTSTR MPCES(0)S(0)PPES(-23.1)ADT(-31.9)PT(-35.74)S(-35.74)T(-35.74)R 0 1 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1028.9014 2 1023.39503 2044.7755 59350.38 0.36582 0.00037438 0.065522 6.7055E-05 0.43134 0.00044144 1023.39488326468 1028.90101672109 25.509 0.35825 25.509 25.275 25.633 0 76 18 6 0 0 0 0.00041979 1 11705 41.86 36.706 7 3.7394 2.8667 0 17616000 3238700 14378000 3972 994 2032 2255 6522 6522 284 1790;1791 MPCESSPPESADTPTSTR 18 0 1 Oxidation (M),Phospho (STY) _M(ox)PCES(ph)SPPESADTPTSTR_ M(1)PCESSPPESADTPTSTR MPCES(0.5)S(0.5)PPESADTPTSTR M(46.97)PCESSPPESADTPTSTR MPCES(0)S(0)PPES(-34.67)ADT(-42.08)PT(-43.46)S(-43.24)T(-43.24)R 0 1 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 685.936 3 682.59911 2044.7755 73786.09 0.90254 0.00061607 -0.051032 -3.4834E-05 0.85151 0.00058124 682.933330540995 685.935313203043 25.466 0.36252 25.466 25.255 25.617 0 106 18 8 0 0 0 0.00050708 1 11776 46.971 43.31 7 3.4472 2.5621 0 22406000 5956500 16449000 3973 994 2032 2255 6523 6523 284 1790;1791 MPCESSPPESADTPTSTR 18 0 1 Oxidation (M),Phospho (STY) _M(ox)PCESS(ph)PPESADTPTSTR_ M(1)PCESSPPESADTPTSTR MPCES(0.014)S(0.986)PPESADTPTSTR M(120.39)PCESSPPESADTPTSTR MPCES(-18.61)S(18.61)PPES(-49.13)ADT(-70.2)PT(-73.52)S(-79.7)T(-78.29)R 0 1 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1023.3956 2 1023.39503 2044.7755 58767.55 0.40074 0.00041012 -0.65874 -0.00067415 -0.258 -0.00026404 1023.39576300711 1028.39923762357 35.339 1.0522 35.339 34.477 35.53 0 854 81 15 0 0 0 4.158E-31 2 19889 120.39 115.72 7 3.0972 1.9571 0 2161900000 537970000 1623900000 3974 994 2032 2255 6524;6525 6525 284 1790;1791 MPCESSPPESADTPTSTR 18 0 1 Oxidation (M),Phospho (STY) _M(ox)PCESS(ph)PPESADTPTSTR_ M(1)PCESSPPESADTPTSTR MPCES(0.019)S(0.981)PPESADTPTSTR M(86)PCESSPPESADTPTSTR MPCES(-17.16)S(17.16)PPES(-34.24)ADT(-48.57)PT(-54.3)S(-53.09)T(-51.81)R 0 1 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1028.4005 2 1023.39503 2044.7755 58907.97 0.35773 0.00036609 -0.038683 -3.9588E-05 0.31904 0.00032651 1023.39633806165 1028.39984640441 35.743 2.2308 35.743 35.517 37.748 3.8147E-06 1340 189 14 0 0 0 1.3081E-10 2 20187 86.005 80.926 7 3.0543 1.9324 0 2030500000 506520000 1523900000 3975 994 2032 2255 6526;6527 6526 284 1790;1791 MPCESSPPESADTPTSTR 18 0 1 Phospho (STY) _MPCES(ph)SPPESADTPTSTR_ MPCES(0.629)S(0.371)PPESADTPTSTR MPCES(2.29)S(-2.29)PPES(-35.18)ADT(-54.38)PT(-59.95)S(-59.95)T(-59.3)R 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1020.9041 2 1015.39757 2028.78059 59554.77 0.49366 0.00050126 -0.083483 -8.4769E-05 0.41018 0.0004165 1015.39709188161 1020.40214988242 50.96 1.3499 50.96 50.297 51.647 0 987 120 11 0 0 0 1.3357E-07 2 31076 73.983 69.955 7 4.2571 2.7984 0 303220000 59417000 243800000 3976 994 2032 2256 6528;6529 6529 1790;1791 MPDEPEEPVVAVSSPAVPPPTK 22 1 0 Oxidation (M),Phospho (STY) _M(ox)PDEPEEPVVAVS(ph)SPAVPPPTK_ M(1)PDEPEEPVVAVSSPAVPPPTK MPDEPEEPVVAVS(0.5)S(0.5)PAVPPPTK M(52.27)PDEPEEPVVAVSSPAVPPPTK MPDEPEEPVVAVS(0)S(0)PAVPPPT(-33.81)K 0 1 1 0 O60885;W8JJB1;Q6PIS5;Q6NXE4;Q05BM2;Q5BJ26;M0QZD9;A0A024R7H8 O60885 O60885 BRD4 Bromodomain-containing protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1185.5553 2 1185.05275 2368.09095 57173.43 0.29566 0.00035037 -0.33246 -0.00039398 -0.036795 -4.3604E-05 1185.55436044634 1189.56081905101 99.211 0.97195 99.211 98.694 99.666 -7.6294E-06 548 82 9 0 0 0 4.5491E-07 2 56739 52.265 45.758 3 0.65917 0.82354 0 66420000 41052000 25368000 3977 932 2033 2257 6530;6531 6531 252 1588;1589 MPFQTSPGGK 10 1 0 Oxidation (M),Phospho (STY) _M(ox)PFQTS(ph)PGGK_ M(1)PFQTSPGGK MPFQT(0.08)S(0.92)PGGK M(112.64)PFQTSPGGK MPFQT(-10.6)S(10.6)PGGK 0 1 1 0 I6LM39;D6QZ43;A0A087X1U4;C6KG44;E1B2J3;E9LUH3;D9ZNA4;D3YJ43;D0UU70;A8K079;A0A140VKC4;E9LUH4;P51608;D5L9I5;C6KG45;A0A075BPP5 I6LM39 I6LM39 MECP2 Methyl-CpG-binding protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 573.2386 2 573.238482 1144.46241 79950.35 0.4924 0.00028226 -0.042166 -2.4171E-05 0.45024 0.00025809 573.238489739331 577.245516414537 44.262 1.0665 44.262 43.676 44.742 0 377 78 6 0 0 0 3.6083E-06 2 16521 112.64 81.916 2 0.54971 0.65701 0 13425000 8458200 4966600 3978 272 2034 2258 6532;6533 6532 66 433;2670 MPFQTSPGGK 10 1 0 Oxidation (M),Phospho (STY) _M(ox)PFQTS(ph)PGGK_ M(1)PFQTSPGGK MPFQT(0.382)S(0.618)PGGK M(99.54)PFQTSPGGK MPFQT(-2.09)S(2.09)PGGK 0 1 1 0 I6LM39;D6QZ43;A0A087X1U4;C6KG44;E1B2J3;E9LUH3;D9ZNA4;D3YJ43;D0UU70;A8K079;A0A140VKC4;E9LUH4;P51608;D5L9I5;C6KG45;A0A075BPP5 I6LM39 I6LM39 MECP2 Methyl-CpG-binding protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 573.2391 2 573.238482 1144.46241 78902.83 0.49989 0.00028656 -0.087925 -5.0402E-05 0.41197 0.00023616 573.238501707191 577.245553748297 45.225 1.0516 45.225 44.698 45.749 0 392 75 7 0 0 0 6.1673E-06 2 16983 99.539 76.511 2 0.52682 0.6476 0 22320000 14438000 7882400 3979 272 2034 2258 6534;6535 6534 66 433;2670 MPFQTSPGGK 10 1 0 Phospho (STY) _MPFQT(ph)SPGGK_ MPFQT(0.5)S(0.5)PGGK MPFQT(0)S(0)PGGK 0 0 1 0 I6LM39;D6QZ43;A0A087X1U4;C6KG44;E1B2J3;E9LUH3;D9ZNA4;D3YJ43;D0UU70;A8K079;A0A140VKC4;E9LUH4;P51608;D5L9I5;C6KG45;A0A075BPP5 I6LM39 I6LM39 MECP2 Methyl-CpG-binding protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 569.2488 2 565.241025 1128.4675 80041.45 0.77482 0.00043796 -0.1705 -9.6371E-05 0.60432 0.00034159 565.240894604049 569.248040437353 59.692 1.3899 59.692 59.041 60.431 0 572 132 6 0 0 0 1.6157E-05 2 36644 100.82 70.893 2 1.0349 0.75948 0 19879000 10279000 9599500 3980 272 2034 2259 6536;6537 6536 433;2670 MPTQSEEEKLSPSPTTEDPR 20 1 1 Oxidation (M),2 Phospho (STY) _M(ox)PTQS(ph)EEEKLSPS(ph)PTTEDPR_ M(1)PTQSEEEKLSPSPTTEDPR MPT(0.022)QS(0.597)EEEKLS(0.577)PS(0.601)PT(0.154)T(0.049)EDPR M(40.1)PTQSEEEKLSPSPTTEDPR MPT(-15.21)QS(0.6)EEEKLS(-0.6)PS(1.69)PT(-6.45)T(-11.32)EDPR 0 1 2 1 D6W5A2;E7EV10;Q9BTC8;Q53QZ9;E7EQY4 D6W5A2 D6W5A2 MTA3;tmp_locus_6 Metastasis-associated protein MTA3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 818.6711 3 812.328887 2433.96483 67512.88 0.92817 0.00075398 -0.1695 -0.00013769 0.75866 0.00061628 812.663187362777 818.336524934975 56.365 1.1516 56.365 55.836 56.987 0 745 96 11 0 0 0 7.3985E-05 1 24239 40.104 32.416 15 0.8355 1.0007 0 126020000 68196000 57826000 3981 778 2035 2260 6538 6538 209 1318;1319;1320 MRDSTGAGNSLVHK 14 1 1 Oxidation (M),Phospho (STY) _M(ox)RDS(ph)TGAGNSLVHK_ M(1)RDSTGAGNSLVHK MRDS(0.712)T(0.287)GAGNSLVHK M(46.51)RDSTGAGNSLVHK MRDS(3.95)T(-3.95)GAGNS(-33.4)LVHK 0 1 1 1 Q7Z534;Q96G26;Q9Y483 Q7Z534 Q7Z534 MTF2 Metal-response element-binding transcription factor 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 523.5681 3 523.567745 1567.68141 83697.5 0.61413 0.00032154 -0.0030423 -1.5929E-06 0.61109 0.00031995 523.567741654291 529.575339467197 18.86 0.26114 18.86 18.721 18.982 0 78 13 8 0 0 0 0.0012089 2 5904 64.298 64.298 3 1.6585 1.2648 0 19596000 7103300 12493000 3982 1136 2036 2261 6539;6540 6540 320 2961 MREDYDSVEQDGDEPGPQR 19 0 2 Oxidation (M) _M(ox)REDYDSVEQDGDEPGPQR_ M(1)REDYDSVEQDGDEPGPQR M(49.53)REDYDSVEQDGDEPGPQR 0 1 0 1 A0A023T787;Q9Y5S9 A0A023T787 A0A023T787 RBM8;RBM8A RNA-binding protein 8A MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 753.9851 3 746.978316 2237.91312 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.934 1 68.934 68.434 69.434 0 0 0 0 0.00086972 1 34251 49.528 37.905 1 3983 1 2037 2262 6541 6541 0 MRPGVACSVSQAQK 14 1 1 Oxidation (M) _M(ox)RPGVACSVSQAQK_ M(1)RPGVACSVSQAQK M(40.62)RPGVACSVSQAQK 0 1 0 1 H0Y9V9;Q53Z07;P32969;E7ESE0 H0Y9V9 H0Y9V9 RPL9 60S ribosomal protein L9 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 776.8887 2 767.876867 1533.73918 NaN NaN NaN -0.37293 -0.00028636 NaN NaN NaN NaN 64.683 0.25444 64.683 64.576 64.83 0 0 0 0 0.0035257 1 30871 40.616 19.152 1 NaN NaN 0 8500900 0 8500900 3984 854 2038 2263 6542 6542 232 MRPLTEEETR 10 0 2 Oxidation (M) _M(ox)RPLTEEETR_ M(1)RPLTEEETR M(45.08)RPLTEEETR 0 1 0 1 J3QLW7;B3KM49;Q9Y221 J3QLW7 J3QLW7 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 649.32 2 639.311351 1276.60815 76667.64 0.65903 0.00042133 -0.63409 -0.00040538 0.024941 1.5945E-05 639.311005410835 649.319285884736 66.707 0.3248 66.707 66.531 66.856 0 113 21 7 0 0 0 0.01949 1 32549 45.077 16.12 1 1.4628 1.8191 0 78456000 29024000 49432000 3985 569 2039 2264 6543 6543 146 MRQDPAHPHVVATGGK 16 1 1 Oxidation (M) _M(ox)RQDPAHPHVVATGGK_ M(1)RQDPAHPHVVATGGK M(62.81)RQDPAHPHVVATGGK 0 1 0 1 E9PS41;Q6RFH5;B4E018 E9PS41 E9PS41 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 434.7269 4 429.970419 1715.85257 92032.32 0.39329 0.0001691 -0.65942 -0.00028353 -0.26612 -0.00011443 429.970047502746 434.475927295837 90.245 0.50284 90.245 89.906 90.409 0 92 44 5 0 0 0 4.1407E-05 2 49569 62.813 59.152 1 1.1625 1.3114 0 19784000 7373100 12411000 3986 816 2040 2265 6544;6545 6544 223 MRQDPAHPHVVATGGK 16 1 1 Oxidation (M) _M(ox)RQDPAHPHVVATGGK_ M(1)RQDPAHPHVVATGGK M(63.15)RQDPAHPHVVATGGK 0 1 0 1 E9PS41;Q6RFH5;B4E018 E9PS41 E9PS41 WDR74 WD repeat-containing protein 74 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 434.4753 4 429.970419 1715.85257 90649.2 0.38227 0.00016437 -0.53281 -0.00022909 -0.15054 -6.4726E-05 429.970353376185 434.475959279822 91.575 1.4224 91.575 90.727 92.15 0 724 122 10 0 0 0 4.0869E-05 3 50855 63.145 60.387 1 1.1627 1.392 0 121580000 58722000 62856000 3987 816 2040 2265 6546;6547;6548 6547 223 MTEIQTPENTPR 12 0 1 Oxidation (M) _M(ox)TEIQTPENTPR_ M(1)TEIQTPENTPR M(44.31)TEIQTPENTPR 0 1 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 716.8419 2 716.840473 1431.66639 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.438 1 57.438 56.938 57.938 0 0 0 0 0.0082715 1 25190 44.309 33.786 1 3988 1220 2041 2266 6549 6549 345 MTQNPNYYNLQGISHR 16 0 1 Oxidation (M) _M(ox)TQNPNYYNLQGISHR_ M(1)TQNPNYYNLQGISHR M(50.08)TQNPNYYNLQGISHR 0 1 0 0 O75643;A4FU77;Q7L5W4;Q9UNV9;B4E0P5;A2RRQ7;B4E150 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 654.9786 3 651.307491 1950.90064 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.047 1 90.047 89.547 90.547 7.6294E-06 0 0 0 0.00024147 1 49468 50.079 39.445 1 3989 937 2042 2267 6550 6550 255 MTSLETKTSDTETEPSK 17 2 0 Oxidation (M),Phospho (STY) _M(ox)TSLETKTS(ph)DTETEPSK_ M(1)TSLETKTSDTETEPSK MTS(0.001)LET(0.19)KT(0.19)S(0.529)DT(0.069)ET(0.02)EPS(0.001)K M(52.36)TSLETKTSDTETEPSK MT(-39.33)S(-27.47)LET(-4.46)KT(-4.46)S(4.46)DT(-8.83)ET(-14.16)EPS(-28.08)K 0 1 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 666.2947 3 660.950026 1979.82825 74154.66 1.0031 0.00066298 0.16337 0.00010798 1.1664 0.00077096 660.950110888135 666.293536250398 47.449 0.88534 47.449 47.037 47.922 -3.8147E-06 319 55 8 0 0 0 4.1985E-05 1 18242 52.365 44.581 8 2.243 2.6006 0 21161000 7397200 13764000 3990 994 2043 2268 6551 6551 285 1792;2895 MTSLETKTSDTETEPSK 17 2 0 Oxidation (M),Phospho (STY) _M(ox)TSLETKTS(ph)DTETEPSK_ M(1)TSLETKTSDTETEPSK MTSLETKT(0.042)S(0.927)DT(0.022)ET(0.009)EPSK M(163.41)TSLETKTSDTETEPSK MT(-115.49)S(-95.72)LET(-43.93)KT(-13.44)S(13.44)DT(-16.32)ET(-20.12)EPS(-60.28)K 0 1 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 998.9393 2 990.921401 1979.82825 60695.69 0.41002 0.0004063 0.17287 0.0001713 0.5829 0.0005776 991.4233257158 998.935991177953 26.35 0.72976 26.35 26.02 26.75 1.9073E-06 176 34 11 0 0 0 1.6799E-61 2 12361 163.41 144.12 8 3.0269 2.2424 0 206860000 51600000 155260000 3991 994 2043 2268 6552;6553 6552 285 1792;2895 MTSLETKTSDTETEPSK 17 2 0 Oxidation (M),Phospho (STY) _M(ox)TSLETKT(ph)SDTETEPSK_ M(1)TSLETKTSDTETEPSK MTS(0.003)LET(0.113)KT(0.375)S(0.375)DT(0.118)ET(0.011)EPS(0.004)K M(47.92)TSLETKTSDTETEPSK MT(-37.65)S(-20.88)LET(-5.21)KT(0)S(0)DT(-5.01)ET(-15.22)EPS(-19.52)K 0 1 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 661.2853 3 660.950026 1979.82825 73097.29 1.0669 0.00070517 -0.26635 -0.00017604 0.80055 0.00052912 660.950003069299 666.292799258356 26.348 0.68087 26.348 26.149 26.83 1.9073E-06 172 31 10 0 0 0 0.0001688 1 12438 47.916 42.707 8 3.1454 2.3433 0 135830000 33194000 102640000 3992 994 2043 2268 6554 6554 285 1792;2895 MVNHFIAEFK 10 1 0 Oxidation (M) _M(ox)VNHFIAEFK_ M(1)VNHFIAEFK M(113.62)VNHFIAEFK 0 1 0 0 Q53HF2;E9PKE3;V9HW22;Q53GZ6;P11142;E9PN89;Q96IS6;B3KTV0;A8K7Q2;B4E1Q1 Q53HF2 Q53HF2 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 630.3215 2 626.313166 1250.61178 80376.86 0.66915 0.0004191 0.072606 4.5474E-05 0.74176 0.00046457 626.312869644073 630.320126817849 111.43 0.35094 111.43 111.2 111.55 0 74 30 5 0 0 0 8.0074E-06 1 65873 113.62 97.96 1 1.8652 2.2131 0 11014000 5019400 5994300 3993 810 2044 2269 6555 6555 219 MVNHFIAEFK 10 1 0 Oxidation (M) _M(ox)VNHFIAEFK_ M(1)VNHFIAEFK M(41.88)VNHFIAEFK 0 1 0 0 Q53HF2;E9PKE3;V9HW22;Q53GZ6;P11142;E9PN89;Q96IS6;B3KTV0;A8K7Q2;B4E1Q1 Q53HF2 Q53HF2 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 626.3133 2 626.313166 1250.61178 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.31 1 111.31 110.81 111.81 7.6294E-06 0 0 0 0.022825 1 65850 41.876 19.136 1 3994 810 2044 2269 6556 6556 219 MWNDLSEK 8 1 0 Oxidation (M),Phospho (STY) _M(ox)WNDLS(ph)EK_ M(1)WNDLSEK MWNDLS(1)EK M(58.7)WNDLSEK MWNDLS(58.7)EK 0 1 1 0 B4DNQ1;E9PKP7;A8K962;P17480;O00164;B4DLB0;E9PLT2 B4DNQ1 B4DNQ1 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 563.7216 2 559.71484 1117.41513 81881.66 0.70458 0.00039437 0.10463 5.8561E-05 0.80921 0.00045293 559.714830491885 563.721864946431 59.818 0.97785 59.818 58.956 59.934 0 274 75 5 0 0 0 0.012074 3 27044 58.699 44.61 1 0.60087 0.76155 0 33612000 17831000 15780000 3995 501 2045 2270 6557;6558;6559 6558 127 860 MWNDLSEK 8 1 0 Oxidation (M),Phospho (STY) _M(ox)WNDLS(ph)EK_ M(1)WNDLSEK MWNDLS(1)EK M(43.49)WNDLSEK MWNDLS(43.49)EK 0 1 1 0 B4DNQ1;E9PKP7;A8K962;P17480;O00164;B4DLB0;E9PLT2 B4DNQ1 B4DNQ1 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 563.722 2 559.71484 1117.41513 81285.56 0.8979 0.00050257 -0.11615 -6.5009E-05 0.78175 0.00043756 559.714687238611 563.721953222138 51.021 0.68201 51.021 50.677 51.359 0 241 60 6 0 0 0 0.027244 1 30729 43.492 43.492 1 0.9493 0.71315 0 10002000 5282600 4719800 3996 501 2045 2270 6560 6560 127 860 MWNDLSEKK 9 2 0 Oxidation (M),Phospho (STY) _M(ox)WNDLS(ph)EKK_ M(1)WNDLSEKK MWNDLS(1)EKK M(56.55)WNDLSEKK MWNDLS(56.55)EKK 0 1 1 1 B4DNQ1;E9PKP7;A8K962;P17480;O00164;B4DLB0;E9PLT2 B4DNQ1 B4DNQ1 UBTF Nucleolar transcription factor 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 631.7772 2 623.762321 1245.51009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.468 1 59.468 58.968 59.968 -3.8147E-06 0 0 0 0.0023486 1 26699 56.548 32.458 1 3997 501 2046 2271 6561 6561 127 860 MWNDLSEKK 9 2 0 Oxidation (M),Phospho (STY) _M(ox)WNDLS(ph)EKK_ M(1)WNDLSEKK MWNDLS(1)EKK M(63.62)WNDLSEKK MWNDLS(63.62)EKK 0 1 1 1 B4DNQ1;E9PKP7;A8K962;P17480;O00164;B4DLB0;E9PLT2 B4DNQ1 B4DNQ1 UBTF Nucleolar transcription factor 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 631.7788 2 623.762321 1245.51009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.611 1 59.611 59.111 60.111 0 0 0 0 0.0017048 1 26805 63.624 26.28 1 3998 501 2046 2271 6562 6562 127 860 NAEAVLQSPGLSGK 14 1 0 Phospho (STY) _NAEAVLQS(ph)PGLSGK_ NAEAVLQS(0.983)PGLS(0.017)GK NAEAVLQS(17.66)PGLS(-17.66)GK 0 0 1 0 Q59H95;B4DIX0;Q13045 Q59H95 Q59H95 FLII Protein flightless-1 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 729.8585 2 725.850513 1449.68647 73457.35 0.83144 0.0006035 -0.046009 -3.3396E-05 0.78543 0.00057011 725.850313172315 729.857565405854 77.995 1.209 77.995 77.377 78.586 0 472 108 6 0 0 0 1.0132E-76 1 40916 185.27 155.46 2 1.6386 2.0496 0 63702000 23362000 40340000 3999 625 2047 2272 6563 6563 1031 NAEAVLQSPGLSGK 14 1 0 Phospho (STY) _NAEAVLQS(ph)PGLSGK_ NAEAVLQS(0.933)PGLS(0.067)GK NAEAVLQS(11.46)PGLS(-11.46)GK 0 0 1 0 Q59H95;B4DIX0;Q13045 Q59H95 Q59H95 FLII Protein flightless-1 homolog ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 730.3569 2 725.850513 1449.68647 NaN NaN NaN -0.5538 -0.00040198 NaN NaN NaN NaN 77.421 0.04705 77.421 77.386 77.433 0 0 0 0 0.00019933 1 40353 59.862 43.609 2 NaN NaN 0 6838600 0 6838600 4000 625 2047 2272 6564 6564 1031 NAEAVLQSPGLSGK 14 1 0 Phospho (STY) _NAEAVLQS(ph)PGLSGK_ NAEAVLQS(0.888)PGLS(0.112)GK NAEAVLQS(8.97)PGLS(-8.97)GK 0 0 1 0 Q59H95;B4DIX0;Q13045 Q59H95 Q59H95 FLII Protein flightless-1 homolog MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 729.8584 2 725.850513 1449.68647 72377.2 1.1745 0.0008525 0.09961 7.2302E-05 1.2741 0.00092481 725.850476944206 729.857684456852 79.249 1.0034 79.249 78.857 79.86 0 439 93 7 0 0 0 1.1036E-50 2 50562 160.04 141.73 2 2.505 1.6469 0 56060000 17185000 38875000 4001 625 2047 2272 6565;6566 6566 1031 NAFDLFKLTPEEK 13 2 0 Phospho (STY) _NAFDLFKLT(ph)PEEK_ NAFDLFKLT(1)PEEK NAFDLFKLT(154.69)PEEK 0 0 1 1 Q99549;A0A0A0MT47 Q99549 Q99549 MPHOSPH8 M-phase phosphoprotein 8 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 816.39 2 816.389471 1630.76439 NaN NaN NaN -0.11146 -9.0991E-05 NaN NaN NaN NaN 125.44 1.5786 125.44 124.84 126.42 7.6294E-06 0 0 0 1.1416E-71 3 76235 154.69 117.84 1 NaN NaN 0 13729000 13729000 0 4002 1191 2048 2273 6567;6568;6569 6569 2979 NAFDLFKLTPEEK 13 2 0 Phospho (STY) _NAFDLFKLT(ph)PEEK_ NAFDLFKLT(1)PEEK NAFDLFKLT(95.24)PEEK 0 0 1 1 Q99549;A0A0A0MT47 Q99549 Q99549 MPHOSPH8 M-phase phosphoprotein 8 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 824.4024 2 816.389471 1630.76439 NaN NaN NaN NaN NaN NaN NaN NaN NaN 126.08 1 126.08 125.58 126.58 0 0 0 0 0.0046356 1 76434 95.236 80.634 1 4003 1191 2048 2273 6570 6570 2979 NAFDLFKLTPEEK 13 2 0 Phospho (STY) _NAFDLFKLT(ph)PEEK_ NAFDLFKLT(1)PEEK NAFDLFKLT(98.51)PEEK 0 0 1 1 Q99549;A0A0A0MT47 Q99549 Q99549 MPHOSPH8 M-phase phosphoprotein 8 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 824.4045 2 816.389471 1630.76439 66927.34 1.0191 0.000832 0.13978 0.00011411 1.1589 0.00094612 816.389567822835 824.403753018202 126.54 1.2506 126.54 126.07 127.32 0 642 115 8 0 0 0 1.4359E-06 2 81992 98.508 81.876 1 1.3155 0.98494 0 93711000 42809000 50902000 4004 1191 2048 2273 6571;6572 6572 2979 NAHLNALK 8 1 0 Unmodified _NAHLNALK_ 0 0 0 0 Q15021;B4E0B7;B3KMS0;F5GZK7;A0PJ76 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 440.7537 2 440.753601 879.49265 91893.43 -0.064991 -2.8645E-05 0.3812 0.00016802 0.31621 0.00013937 440.753845004129 444.760717321694 19.992 0.18937 19.992 19.879 20.068 0 23 8 4 0 0 0 0.019919 1 6948 75.972 45.36 1 1.7054 1.426 0 5218100 2047600 3170600 4005 1067 2049 2274 6573 6573 NAIASDSEADSDTEVPK 17 1 0 Phospho (STY) _NAIASDSEADS(ph)DTEVPK_ NAIASDSEADS(0.956)DT(0.044)EVPK NAIAS(-75.29)DS(-48.45)EADS(13.39)DT(-13.39)EVPK 0 0 1 0 Q8WVC0;B4DNM0 Q8WVC0 Q8WVC0 LEO1 RNA polymerase-associated protein LEO1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 918.8846 2 914.87785 1827.74115 63068.27 0.37304 0.00034129 -0.19615 -0.00017945 0.1769 0.00016184 914.878037612106 918.885069636385 58.436 1.1896 58.436 57.853 59.042 0 566 96 8 0 0 0 2.0864E-73 2 25662 172.37 154.82 4 1.2945 1.6037 0 140490000 62788000 77698000 4006 1166 2050 2275 6574;6575 6574 2251;2252;2253 NAIASDSEADSDTEVPK 17 1 0 Phospho (STY) _NAIAS(ph)DSEADSDTEVPK_ NAIAS(0.749)DS(0.229)EADS(0.011)DT(0.011)EVPK NAIAS(5.15)DS(-5.15)EADS(-18.38)DT(-18.38)EVPK 0 0 1 0 Q8WVC0;B4DNM0 Q8WVC0 Q8WVC0 LEO1 RNA polymerase-associated protein LEO1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 919.3849 2 914.87785 1827.74115 62684.05 0.40407 0.00036967 0.35678 0.00032641 0.76085 0.00069608 915.378924535962 918.885289261545 62.314 0.74046 62.314 61.869 62.609 0 100 54 5 0 0 0 0.00093056 1 28983 40.857 26.699 4 1.2229 1.4704 0 15682000 8620200 7062300 4007 1166 2050 2275 6576 6576 2251;2252;2253 NAIASDSEADSDTEVPK 17 1 0 Phospho (STY) _NAIASDSEADS(ph)DTEVPK_ NAIASDSEADS(0.867)DT(0.133)EVPK NAIAS(-80.85)DS(-42.11)EADS(8.15)DT(-8.15)EVPK 0 0 1 0 Q8WVC0;B4DNM0 Q8WVC0 Q8WVC0 LEO1 RNA polymerase-associated protein LEO1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 915.3795 2 914.87785 1827.74115 63616.07 1.0598 0.00096963 -0.36038 -0.0003297 0.69947 0.00063993 914.877778636904 918.884896576159 55.231 1.4021 55.231 54.54 55.942 0 966 122 12 0 0 0 2.4358E-51 2 33877 150.45 138.53 4 1.2947 0.85873 0 76540000 34326000 42213000 4008 1166 2050 2275 6577;6578 6577 2251;2252;2253 NAIASDSEADSDTEVPK 17 1 0 2 Phospho (STY) _NAIAS(ph)DSEADS(ph)DTEVPK_ NAIAS(0.953)DS(0.153)EADS(0.709)DT(0.185)EVPK NAIAS(13.54)DS(-7.79)EADS(6.03)DT(-6.03)EVPK 0 0 2 0 Q8WVC0;B4DNM0 Q8WVC0 Q8WVC0 LEO1 RNA polymerase-associated protein LEO1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 959.3758 2 954.861016 1907.70748 61834.21 0.59843 0.00057141 1.042 0.000995 1.6405 0.0015664 954.861914629847 958.867617994661 62.961 1.3342 62.961 62.293 63.627 -3.8147E-06 627 110 9 0 0 0 0.00011133 2 29751 50.493 41.682 6 1.1562 1.4367 0 92239000 43330000 48909000 4009 1166 2050 2276 6579;6580 6579 2251;2252;2253 NAIASDSEADSDTEVPK 17 1 0 3 Phospho (STY) _NAIAS(ph)DS(ph)EADS(ph)DTEVPK_ NAIAS(0.98)DS(0.98)EADS(0.933)DT(0.108)EVPK NAIAS(16.39)DS(16.39)EADS(11.21)DT(-11.21)EVPK 0 0 3 0 Q8WVC0;B4DNM0 Q8WVC0 Q8WVC0 LEO1 RNA polymerase-associated protein LEO1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 994.8445 2 994.844181 1987.67381 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.04 1 66.04 65.54 66.54 0 0 0 0 0.00039802 1 32010 49.448 35.785 4 4010 1166 2050 2277 6581 6581 2251;2252;2253 NAIASDSEADSDTEVPK 17 1 0 3 Phospho (STY) _NAIAS(ph)DS(ph)EADS(ph)DTEVPK_ NAIAS(1)DS(1)EADS(0.946)DT(0.054)EVPK NAIAS(96.38)DS(63.44)EADS(12.44)DT(-12.44)EVPK 0 0 3 0 Q8WVC0;B4DNM0 Q8WVC0 Q8WVC0 LEO1 RNA polymerase-associated protein LEO1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 998.852 2 994.844181 1987.67381 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.71 1 66.71 66.21 67.21 0 0 0 0 9.4646E-28 1 32581 144.3 122.76 4 4011 1166 2050 2277 6582 6582 2251;2252;2253 NASASFQELEDKK 13 2 0 Phospho (STY) _NAS(ph)ASFQELEDKK_ NAS(0.996)AS(0.004)FQELEDKK NAS(23.69)AS(-23.69)FQELEDKK 0 0 1 1 F2Z3H0;F2Z3N9;Q6P5S9;H7C3L7;Q99543 F2Z3H0 F2Z3H0 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 773.8439 2 773.842885 1545.67122 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.252 1 74.252 73.752 74.752 0 0 0 0 8.545E-05 1 37998 64.244 52.098 2 4012 822 2051 2278 6583 6583 1416 NASMNTQHGTATEVAVETTTPK 22 1 0 Oxidation (M) _NASM(ox)NTQHGTATEVAVETTTPK_ NASM(1)NTQHGTATEVAVETTTPK NASM(83.61)NTQHGTATEVAVETTTPK 0 1 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 771.3699 3 768.697261 2303.06995 NaN NaN NaN 0.078027 5.9979E-05 NaN NaN NaN NaN 71.561 0.56183 71.561 71.335 71.897 0 0 0 0 1.8578E-18 2 35933 83.606 68.517 1 NaN NaN 0 14984000 0 14984000 4013 1232 2052 2279 6584;6585 6584 354 NASVYSPSGPVNR 13 0 1 Phospho (STY) _NASVYS(ph)PSGPVNR_ NASVYS(0.889)PS(0.11)GPVNR NAS(-37.16)VY(-35.14)S(9.07)PS(-9.07)GPVNR 0 0 1 0 A0A0F6QNT9;Q9NS56 A0A0F6QNT9 A0A0F6QNT9 TOPORS E3 ubiquitin-protein ligase Topors MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 714.3194 2 714.31938 1426.62421 74554.64 0.66817 0.00047729 -0.25789 -0.00018421 0.41028 0.00029307 714.319293389188 719.32294977834 58.923 0.81132 58.923 58.412 59.223 0 211 65 5 0 0 0 5.5973E-05 1 26273 88.706 71.012 4 0.53595 0.61425 0 11705000 5999500 5705800 4014 337 2053 2280 6586 6586 532 NAVALSASPQLK 12 1 0 Phospho (STY) _NAVALS(ph)ASPQLK_ NAVALS(0.934)AS(0.066)PQLK NAVALS(11.52)AS(-11.52)PQLK 0 0 1 0 A7E2X7;A0AV47;Q92547 A7E2X7 A7E2X7 TOPBP1 DNA topoisomerase 2-binding protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 643.8345 2 639.82631 1277.63807 76565.28 1.1069 0.00070821 0.12155 7.7773E-05 1.2284 0.00078598 639.826412686141 643.833439339619 81.806 0.89263 81.806 81.406 82.299 0 377 84 6 0 0 0 0.00030529 1 52245 86.288 74.694 2 1.3921 0.91899 0 30108000 13127000 16981000 4015 392 2054 2281 6587 6587 670 NCLALADDK 9 1 0 Unmodified _NCLALADDK_ 0 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 514.2519 2 510.244949 1018.47534 NaN NaN NaN 0.8037 0.00041008 NaN NaN NaN NaN 65.954 0.44917 65.954 65.678 66.127 0 0 0 0 0.015627 1 31805 56.258 34.172 1 NaN NaN 0 15020000 0 15020000 4016 935 2055 2282 6588 6588 NCLALADDK 9 1 0 Unmodified _NCLALADDK_ 0 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 510.2455 2 510.244949 1018.47534 83632.57 0.66222 0.0003379 -0.39325 -0.00020065 0.26897 0.00013724 510.244776827475 514.251821534485 39.676 0.51689 39.676 39.411 39.928 0 170 44 6 0 0 0 0.0037555 2 22980 74.376 63.998 1 1.2068 0.85944 0 21642000 9632600 12009000 4017 935 2055 2282 6589;6590 6590 NCLALADDKK 10 2 0 Unmodified _NCLALADDKK_ 0 0 0 1 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 574.2928 2 574.29243 1146.57031 80636.53 0.47992 0.00027561 -0.42371 -0.00024333 0.05621 3.2281E-05 574.292688648981 582.306518628719 72.745 0.7644 72.745 72.363 73.127 0 190 63 5 0 0 0 0.0007577 1 36931 89.029 75.651 1 0.83049 1.0393 0 44037000 23358000 20678000 4018 935 2056 2283 6591 6591 NCLALADDKK 10 2 0 Unmodified _NCLALADDKK_ 0 0 0 1 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 574.2928 2 574.29243 1146.57031 79892.05 0.46159 0.00026509 0.22615 0.00012988 0.68774 0.00039496 574.292526327343 582.306746797973 25.108 0.37847 25.108 24.92 25.298 0 80 19 6 0 0 0 0.023961 1 11407 60.398 50.167 1 1.2382 1.0225 0 15078000 6917700 8160100 4019 935 2056 2283 6592 6592 NCPAVTLTSPAK 12 1 0 Phospho (STY) _NCPAVTLTS(ph)PAK_ NCPAVT(0.104)LT(0.095)S(0.802)PAK NCPAVT(-8.88)LT(-9.28)S(8.88)PAK 0 0 1 0 W5ZR30;Q9UGU0 W5ZR30 W5ZR30 TCF20 Transcription factor 20 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 673.8171 2 669.809803 1337.60505 NaN NaN NaN -1.5496 -0.0010379 NaN NaN NaN NaN 67.968 0.51653 67.968 67.803 68.32 7.6294E-06 0 0 0 0.0021316 3 33748 63.662 47.63 3 NaN NaN 0 10783000 0 10783000 4020 1227 2057 2284 6593;6594;6595 6595 2495;2997 NCPAVTLTSPAK 12 1 0 Phospho (STY) _NCPAVTLTS(ph)PAK_ NCPAVT(0.004)LT(0.102)S(0.894)PAK NCPAVT(-23.51)LT(-9.44)S(9.44)PAK 0 0 1 0 W5ZR30;Q9UGU0 W5ZR30 W5ZR30 TCF20 Transcription factor 20 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 673.8177 2 669.809803 1337.60505 NaN NaN NaN -2.1582 -0.0014456 NaN NaN NaN NaN 64.511 2.0772 64.511 63.882 65.959 0 0 0 0 7.2639E-10 3 39961 97.716 82.685 3 NaN NaN 0 35970000 0 35970000 4021 1227 2057 2284 6596;6597;6598 6596 2495;2997 NCQHANAERPTVAR 14 0 2 Unmodified _NCQHANAERPTVAR_ 0 0 0 1 Q9Y5J1;B2RAX6;F6VJE8 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 411.7039 4 406.699669 1622.76957 91867.91 -0.11087 -4.5092E-05 -0.066155 -2.6905E-05 -0.17703 -7.1997E-05 406.699709177346 411.703777013683 67.891 0.75969 67.891 67.596 68.356 0 332 62 8 0 0 0 0.0014757 1 33375 43.184 33.084 1 0.75879 0.94721 0 196250000 119530000 76724000 4022 1255 2058 2285 6599 6599 NCQHANAERPTVAR 14 0 2 Unmodified _NCQHANAERPTVAR_ 0 0 0 1 Q9Y5J1;B2RAX6;F6VJE8 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 541.9304 3 541.930466 1622.76957 81130.65 0.50505 0.0002737 -0.10982 -5.9516E-05 0.39523 0.00021419 541.930414402771 548.602640799377 67.913 0.55262 67.913 67.662 68.215 0 183 44 7 0 0 0 0.0061012 1 33476 54.276 29.58 1 0.77534 0.96428 0 80177000 42361000 37817000 4023 1255 2058 2285 6600 6600 NDLQDTEISPR 11 0 1 Phospho (STY) _NDLQDTEIS(ph)PR_ NDLQDTEIS(1)PR NDLQDT(-35.45)EIS(35.45)PR 0 0 1 0 Q53H10;A0A024R2I7;Q9NS91 Q53H10 Q53H10 RAD18 E3 ubiquitin-protein ligase RAD18 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 684.2963 2 684.295571 1366.57659 73321.34 0.6814 0.00046628 -0.19751 -0.00013516 0.48389 0.00033112 684.295670434335 689.299783811853 61.435 1.1372 61.435 60.761 61.899 3.8147E-06 332 81 6 0 0 0 8.2406E-35 3 28070 159.66 118.26 2 0.9458 1.1904 0 49044000 23341000 25702000 4024 65 2059 2286 6601;6602;6603 6602 83 NDLQDTEISPR 11 0 1 Phospho (STY) _NDLQDTEIS(ph)PR_ NDLQDT(0.042)EIS(0.958)PR NDLQDT(-13.6)EIS(13.6)PR 0 0 1 0 Q53H10;A0A024R2I7;Q9NS91 Q53H10 Q53H10 RAD18 E3 ubiquitin-protein ligase RAD18 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 684.296 2 684.295571 1366.57659 75530.67 1.1026 0.00075452 0.10036 6.8676E-05 1.203 0.00082319 684.295354361818 689.299440562867 56.915 1.0334 56.915 56.428 57.461 0 423 88 8 0 0 0 0.00029187 2 34835 87.989 61.865 2 0.67704 0.4772 0 32042000 18039000 14003000 4025 65 2059 2286 6604;6605 6604 83 NDMDEPPPLDYGSGEDDGK 19 1 0 Oxidation (M),Phospho (STY) _NDM(ox)DEPPPLDYGS(ph)GEDDGK_ NDM(1)DEPPPLDYGSGEDDGK NDMDEPPPLDYGS(1)GEDDGK NDM(85.5)DEPPPLDYGSGEDDGK NDMDEPPPLDY(-37.28)GS(37.28)GEDDGK 0 1 1 0 Q12873;H7C2H0 Q12873 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1078.399 2 1073.89337 2145.77219 NaN NaN NaN 0.11418 0.00012261 NaN NaN NaN NaN 76.917 0.92542 76.917 76.304 77.23 0 0 0 0 3.8592E-13 1 39769 85.496 75.966 2 NaN NaN 0 29187000 0 29187000 4026 1045 2060 2287 6606 6606 300 1953 NDPEITINVPQSSK 14 1 0 Phospho (STY) _NDPEITINVPQS(ph)SK_ NDPEITINVPQS(0.5)S(0.5)K NDPEIT(-35.94)INVPQS(0)S(0)K 0 0 1 0 B4DYU9;A0A024R411;Q13416 B4DYU9 B4DYU9 ORC2L;ORC2 Origin recognition complex subunit 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 815.3842 2 811.377092 1620.73963 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.35 1 87.35 86.85 87.85 0 0 0 0 0.00041868 1 47485 52.372 42.418 3 4027 84 2061 2288 6607 6607 110;111 NDQEPPPEALDFSDDEK 17 1 0 Phospho (STY) _NDQEPPPEALDFS(ph)DDEK_ NDQEPPPEALDFS(1)DDEK NDQEPPPEALDFS(56.42)DDEK 0 0 1 0 Q96HR8 Q96HR8 Q96HR8 NAF1 H/ACA ribonucleoprotein complex non-core subunit NAF1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1013.9034 2 1013.40169 2024.78883 61126.43 0.31428 0.00031849 0.62229 0.00063063 0.93657 0.00094912 1013.90378172679 1017.40927309094 97.672 0.85471 97.672 97.245 98.1 -7.6294E-06 420 79 7 0 0 0 6.4677E-05 1 62805 56.424 50.931 1 0.92279 0.70448 0 17582000 9029000 8553300 4028 1177 2062 2289 6608 6608 2313 NDRDQHTDSTQSANSSPDEDTEVK 24 1 1 Phospho (STY) _NDRDQHTDSTQSANS(ph)SPDEDTEVK_ NDRDQHTDSTQSANS(0.486)S(0.486)PDEDT(0.027)EVK NDRDQHT(-49.45)DS(-47.26)T(-46.52)QS(-33.53)ANS(0)S(0)PDEDT(-12.56)EVK 0 0 1 1 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 925.7096 3 919.368687 2755.08423 62981.47 0.38462 0.0003536 0.29933 0.00027519 0.68395 0.0006288 919.703428185766 925.710715232265 61.93 0.31646 61.93 61.762 62.078 -3.8147E-06 127 19 11 0 0 0 4.1311E-21 1 28681 90.884 83.345 7 1.0913 1.3045 0 108660000 51440000 57217000 4029 1034 2063 2290 6609 6609 1886;1887 NDRDQHTDSTQSANSSPDEDTEVK 24 1 1 Unmodified _NDRDQHTDSTQSANSSPDEDTEVK_ 0 0 0 1 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 898.7219 3 892.713244 2675.1179 65220.04 1.0994 0.00098145 -1.1305 -0.0010092 -0.031134 -2.7794E-05 893.046130875681 899.054168239826 16.933 0.22015 16.933 16.833 17.053 0 36 8 7 0 0 0 2.1781E-09 1 4208 57.046 57.046 1 1.9579 1.7326 0 6062000 2207000 3855000 4030 1034 2063 2291 6610 6610 NDSVIVADQTPTPTR 15 0 1 2 Phospho (STY) _NDSVIVADQT(ph)PT(ph)PTR_ NDSVIVADQT(0.993)PT(0.894)PT(0.113)R NDS(-80.69)VIVADQT(21)PT(9.22)PT(-9.22)R 0 0 2 0 E9PEK8;H7C2N6;A4D7U3;B8ZZU6;E9PBF9;P15336 E9PEK8 E9PEK8 ATF2 Cyclic AMP-dependent transcription factor ATF-2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 887.8778 2 887.376439 1772.73832 NaN NaN NaN -0.43623 -0.0003871 NaN NaN NaN NaN 71.881 0.64783 71.881 71.528 72.176 0 0 0 0 2.4114E-18 1 36098 107.5 92.334 6 NaN NaN 0 14161000 14161000 0 4031 420 2064 2292 6611 6611 2720;2721 NDSWGSFDLR 10 0 1 Phospho (STY) _NDS(ph)WGSFDLR_ NDS(1)WGSFDLR NDS(43.58)WGS(-43.58)FDLR 0 0 1 0 Q7Z417 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 638.7534 2 638.753342 1275.49213 77874.73 0.78043 0.0004985 0.11427 7.2993E-05 0.8947 0.00057149 638.753423215388 643.757612765409 109.62 0.81559 109.62 109.23 110.05 0 248 60 6 0 0 0 0.0016827 2 64326 75.739 63.112 2 1.0983 1.3316 0 19937000 10302000 9635100 4032 1135 2065 2293 6612;6613 6613 2170 NEALPVTLGFQTPES 15 0 0 2 Phospho (STY) _NEALPVTLGFQT(ph)PES(ph)_ NEALPVT(0.012)LGFQT(0.99)PES(0.997) NEALPVT(-20.13)LGFQT(20.13)PES(25.34) 0 0 2 0 A0A024R512;Q8IYA6 A0A024R512 A0A024R512 FLJ40629;CKAP2L Cytoskeleton-associated protein 2-like ISO-MSMS -1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 881.8719 2 881.870458 1761.72636 NaN NaN NaN 0.2308 0.00020353 NaN NaN NaN NaN 146.27 2.0217 146.27 145.98 148 0 0 0 0 0.0028398 1 89611 40.493 24.922 3 4033 100 2066 2294 6614 6614 131;2634 NEDEEEEEEEKDEAEDLLGR 20 1 1 Unmodified _NEDEEEEEEEKDEAEDLLGR_ 0 0 0 1 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 809.3439 3 803.00162 2405.98303 66145.23 0.98599 0.00079175 0.30122 0.00024188 1.2872 0.0010336 803.336039349121 809.009301864717 103.73 1.8932 103.73 102.99 104.89 0 526 135 10 0 0 0 1.3543E-22 2 59610 109.03 101.22 1 0.67836 0.81473 0 155940000 94055000 61885000 4034 1254 2067 2295 6615;6616 6616 NEDEEEEEEEKDEAEDLLGR 20 1 1 Unmodified _NEDEEEEEEEKDEAEDLLGR_ 0 0 0 1 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 809.3442 3 803.00162 2405.98303 69163.54 1.2941 0.0010392 -0.19819 -0.00015915 1.0959 0.00088001 803.336002775541 809.008881376058 90.65 1.8032 90.65 89.694 91.497 0 1182 172 9 0 0 0 4.2678E-05 2 58101 50.87 42.682 1 0.74905 0.57756 0 50735000 29888000 20847000 4035 1254 2067 2295 6617;6618 6617 NEDRGEEEAESSISSTSNEQLK 22 1 1 Phospho (STY) _NEDRGEEEAESS(ph)ISSTSNEQLK_ NEDRGEEEAES(0.226)S(0.764)IS(0.007)S(0.002)T(0.001)SNEQLK NEDRGEEEAES(-5.29)S(5.29)IS(-20.42)S(-26.2)T(-30.38)S(-34.25)NEQLK 0 0 1 1 Q6PJR5;B7Z3Z1;Q5UGI2;A0A0A0MRY2;Q5BJG6;B7Z3W2;B0QZE2;B7Z2J6;E7ENI9;J3QKD2;Q15326 Q6PJR5 Q6PJR5 ZMYND11 Zinc finger MYND domain-containing protein 11 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 846.695 3 840.352086 2518.03443 66056.67 0.64397 0.00054116 -0.087226 -7.33E-05 0.55675 0.00046786 840.686333509485 846.69400687265 62.027 0.8233 62.027 61.733 62.556 -3.8147E-06 376 59 8 0 0 0 2.7971E-15 1 28705 77.322 77.322 6 1.0879 1.2871 0 49169000 19176000 29993000 4036 291 2068 2296 6619 6619 463 NEDRGEEEAESSISSTSNEQLK 22 1 1 Unmodified _NEDRGEEEAESSISSTSNEQLK_ 0 0 0 1 Q6PJR5;B7Z3Z1;Q5UGI2;A0A0A0MRY2;Q5BJG6;B7Z3W2;B0QZE2;B7Z2J6;E7ENI9;J3QKD2;Q15326 Q6PJR5 Q6PJR5 ZMYND11 Zinc finger MYND domain-containing protein 11 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 819.7018 3 813.696643 2438.0681 NaN NaN NaN -1.6648 -0.0013546 NaN NaN NaN NaN 75.932 0.17011 75.932 75.81 75.98 7.6294E-06 0 0 0 6.865E-06 1 39233 50.752 41.222 1 NaN NaN 0 7579700 0 7579700 4037 291 2068 2297 6620 6620 NEEPSEEEIDAPK 13 1 0 Phospho (STY) _NEEPS(ph)EEEIDAPK_ NEEPS(1)EEEIDAPK NEEPS(117.7)EEEIDAPK 0 0 1 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 787.8218 2 783.81399 1565.61343 68815.08 0.79788 0.00062539 -0.05124 -4.0163E-05 0.74664 0.00058523 783.814001527837 787.82111363854 55.594 1.435 55.594 54.981 56.416 -3.8147E-06 772 114 9 0 0 0 9.6178E-15 3 24117 117.7 110.58 1 0.87098 1.0794 0 130040000 67748000 62293000 4038 1214 2069 2298 6621;6622;6623 6623 2442 NEEPSEEEIDAPK 13 1 0 Phospho (STY) _NEEPS(ph)EEEIDAPK_ NEEPS(1)EEEIDAPK NEEPS(85.54)EEEIDAPK 0 0 1 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 783.8152 2 783.81399 1565.61343 68373.51 1.2314 0.00096523 0.11369 8.9116E-05 1.3451 0.0010543 783.814067220674 787.821223828946 51.399 1.2486 51.399 50.855 52.104 3.8147E-06 724 111 9 0 0 0 0.00011685 3 30984 85.536 75.959 1 1.0589 0.70337 0 83923000 41555000 42369000 4039 1214 2069 2298 6624;6625;6626 6625 2442 NEEPSEEEIDAPKPK 15 2 0 Phospho (STY) _NEEPS(ph)EEEIDAPKPK_ NEEPS(1)EEEIDAPKPK NEEPS(115.78)EEEIDAPKPK 0 0 1 1 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 904.4029 2 896.387854 1790.76115 61947.07 0.82259 0.00073736 -0.1114 -9.9854E-05 0.7112 0.00063751 896.387990423166 904.402160329207 59.942 1.484 59.942 59.263 60.747 0 816 110 10 0 0 0 2.7125E-18 4 27325 115.78 100.81 1 0.82027 1.103 0 567400000 306460000 260940000 4040 1214 2070 2299 6627;6628;6629;6630 6629 2442 NEEPSEEEIDAPKPK 15 2 0 Phospho (STY) _NEEPS(ph)EEEIDAPKPK_ NEEPS(1)EEEIDAPKPK NEEPS(94.39)EEEIDAPKPK 0 0 1 1 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 597.9282 3 597.927661 1790.76115 75911.52 0.73783 0.00044117 0.17865 0.00010682 0.91648 0.00054799 597.927961154428 603.270476115265 59.947 1.4805 59.947 59.306 60.787 -3.8147E-06 793 109 12 0 0 0 7.7812E-09 4 26658 94.387 79 1 0.82244 1.1099 0 644590000 355340000 289250000 4041 1214 2070 2299 6631;6632;6633;6634 6631 2442 NEEPSEEEIDAPKPK 15 2 0 Phospho (STY) _NEEPS(ph)EEEIDAPKPK_ NEEPS(1)EEEIDAPKPK NEEPS(100.97)EEEIDAPKPK 0 0 1 1 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 603.6058 3 597.927661 1790.76115 77719.55 0.98596 0.00058953 -0.1665 -9.9556E-05 0.81946 0.00048998 597.927847677135 603.270347383672 42.847 3.6622 42.847 41.951 45.613 0 2316 329 11 0 0 0 1.459E-12 7 24711 100.97 84.472 1 1.1141 0.81292 0 641330000 299040000 342290000 4042 1214 2070 2299 6635;6636;6637;6638;6639;6640;6641 6635 2442 NEEPSEEEIDAPKPK 15 2 0 Phospho (STY) _NEEPS(ph)EEEIDAPKPK_ NEEPS(1)EEEIDAPKPK NEEPS(87.57)EEEIDAPKPK 0 0 1 1 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 896.3879 2 896.387854 1790.76115 63937.56 1.0982 0.00098446 -0.32672 -0.00029287 0.77153 0.00069159 896.387839761511 904.401757339521 42.729 3.8027 42.729 41.963 45.766 0 2362 343 12 0 0 0 1.2113E-06 2 25242 87.566 67.185 1 1.1024 0.80077 0 903080000 419930000 483160000 4043 1214 2070 2299 6642;6643 6642 2442 NEETLREEEEEK 12 1 1 Unmodified _NEETLREEEEEK_ 0 0 0 1 P82663 P82663 P82663 MRPS25 28S ribosomal protein S25, mitochondrial ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 776.8582 2 767.847007 1533.67946 NaN NaN NaN 0.12216 9.3798E-05 NaN NaN NaN NaN 64.047 0.22934 64.047 63.939 64.169 0 0 0 0 6.8523E-71 1 30349 156.51 90.072 1 NaN NaN 0 14135000 0 14135000 4044 1028 2071 2300 6644 6644 NEETLREEEEEKK 13 2 1 Unmodified _NEETLREEEEEKK_ 0 0 0 2 P82663 P82663 P82663 MRPS25 28S ribosomal protein S25, mitochondrial MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 563.6105 3 554.932084 1661.77442 83118.41 0.57984 0.00032177 -0.29757 -0.00016513 0.28226 0.00015664 555.266031856238 563.610834730797 71.541 0.7013 71.541 71.185 71.886 0 145 63 5 0 0 0 0.0017373 2 36045 53.869 29.31 1 1.257 1.4676 0 18406000 5667600 12738000 4045 1028 2072 2301 6645;6646 6645 NEETLREEEEEKK 13 2 1 Unmodified _NEETLREEEEEKK_ 0 0 0 2 P82663 P82663 P82663 MRPS25 28S ribosomal protein S25, mitochondrial MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 563.6106 3 554.932084 1661.77442 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.143 1 71.143 70.643 71.643 0 0 0 0 0.0085975 1 35677 43.594 19.763 1 4046 1028 2072 2301 6647 6647 NEETLREEEEEKK 13 2 1 Unmodified _NEETLREEEEEKK_ 0 0 0 2 P82663 P82663 P82663 MRPS25 28S ribosomal protein S25, mitochondrial MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 554.9329 3 554.932084 1661.77442 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.55 1 71.55 71.05 72.05 0 0 0 0 0.0058045 1 35962 47.915 14.23 1 4047 1028 2072 2301 6648 6648 NEKPTQSVSSPEATSGSTGSVEK 23 2 0 Phospho (STY) _NEKPTQSVSS(ph)PEATSGSTGSVEK_ NEKPT(0.013)QS(0.051)VS(0.3)S(0.633)PEAT(0.002)S(0.001)GSTGSVEK NEKPT(-16.82)QS(-10.97)VS(-3.25)S(3.25)PEAT(-25.75)S(-29.82)GS(-34.15)T(-36.19)GS(-37.49)VEK 0 0 1 1 H0YE68;Q9BZ95 H0YE68 H0YE68 WHSC1L1 Histone-lysine N-methyltransferase NSD3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 796.6937 3 796.358512 2386.05371 68144.7 1.0113 0.00080537 -0.36961 -0.00029434 0.64171 0.00051103 796.692943914499 801.701508811915 29.693 0.75473 29.693 29.27 30.025 1.9073E-06 293 53 11 0 0 0 5.4538E-08 1 15257 53.078 53.078 9 0.78867 0.596 0 54312000 29183000 25129000 4048 857 2073 2302 6649 6649 1465 NELHNLLDK 9 1 0 Unmodified _NELHNLLDK_ 0 0 0 0 A0A087X2J2;B4DQT8;B2R7U5;A0A024R977;A0A024R2D4;B4E1J8;Q9NVJ2;Q96BM9 A0A087X2J2 A0A087X2J2 ARL8A;ARL8B ADP-ribosylation factor-like protein 8B;ADP-ribosylation factor-like protein 8A MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 552.3015 2 548.293288 1094.57202 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.12 1 108.12 107.62 108.62 0 0 0 0 0.0044055 1 63299 69.275 39.109 1 4049 62 2074 2303 6650 6650 NELPMHHNSSR 11 0 1 Oxidation (M) _NELPM(ox)HHNSSR_ NELPM(1)HHNSSR NELPM(43.99)HHNSSR 0 1 0 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 450.209 3 446.538687 1336.59423 92851.36 -0.024994 -1.1161E-05 0.36665 0.00016372 0.34166 0.00015256 446.538682679885 449.875035872675 67.044 0.4169 67.044 66.84 67.257 0 100 32 5 0 0 0 0.005435 1 32920 43.991 26.966 1 0.702 0.8637 0 24152000 12904000 11248000 4050 1035 2075 2304 6651 6651 297 NENEEILERPAQLANAR 17 0 2 Unmodified _NENEEILERPAQLANAR_ 0 0 0 1 B4DN52;Q53GG0;Q9UHB6;F8VQE1;F8VS07;B3KTW2 B4DN52 B4DN52 LIMA1 LIM domain and actin-binding protein 1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 663.0109 3 656.336215 1965.98682 NaN NaN NaN 0.52436 0.00034415 NaN NaN NaN NaN 100.15 0.46421 100.15 99.871 100.33 -7.6294E-06 0 0 0 3.7525E-06 1 57299 70.197 42.862 1 NaN NaN 0 10045000 0 10045000 4051 644 2076 2305 6652 6652 NENTEGSPQEDGVELEGLK 19 1 0 Phospho (STY) _NENT(ph)EGSPQEDGVELEGLK_ NENT(0.574)EGS(0.426)PQEDGVELEGLK NENT(1.3)EGS(-1.3)PQEDGVELEGLK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1067.4553 2 1062.95208 2123.8896 59617.22 -8.0483E-05 -8.555E-08 0.25833 0.0002746 0.25825 0.00027451 1063.45394699805 1066.95967239917 83.647 1.0017 83.647 83.111 84.113 0 380 93 5 0 0 0 0.00086772 1 45142 45.115 45.115 2 0.65978 0.83504 0 43971000 23597000 20374000 4052 962 2077 2306 6653 6653 1694;2874 NENTEGSPQEDGVELEGLK 19 1 0 Phospho (STY) _NENT(ph)EGSPQEDGVELEGLK_ NENT(0.5)EGS(0.5)PQEDGVELEGLK NENT(0)EGS(0)PQEDGVELEGLK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 709.3054 3 708.970477 2123.8896 71959.98 0.58818 0.000417 0.44219 0.0003135 1.0304 0.0007305 708.970424587107 711.642010873698 84.213 0.1055 84.213 84.136 84.241 0 22 8 4 0 0 0 3.2389E-05 1 45312 45.704 45.704 2 0.73604 0.90932 0 23517000 13091000 10426000 4053 962 2077 2306 6654 6654 1694;2874 NENTEGSPQEDGVELEGLK 19 1 0 Phospho (STY) _NENTEGS(ph)PQEDGVELEGLK_ NENTEGS(1)PQEDGVELEGLK NENT(-40.29)EGS(40.29)PQEDGVELEGLK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1063.4554 2 1062.95208 2123.8896 58718.52 0.31601 0.0003359 0.0401 4.2625E-05 0.35611 0.00037852 1063.45393541415 1066.95910749115 86.262 2.7777 86.262 84.265 87.043 0 1348 261 10 0 0 0 1.0052E-165 6 46209 214.63 201.43 2 0.80002 0.98769 0 697460000 310710000 386740000 4054 962 2077 2306 6655;6656;6657;6658;6659;6660 6659 1694;2874 NENTEGSPQEDGVELEGLK 19 1 0 Phospho (STY) _NENTEGS(ph)PQEDGVELEGLK_ NENT(0.069)EGS(0.931)PQEDGVELEGLK NENT(-11.27)EGS(11.27)PQEDGVELEGLK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 709.3048 3 708.970477 2123.8896 71055.02 0.75491 0.00053521 -0.23326 -0.00016538 0.52165 0.00036983 708.970311276619 711.641822844444 85.318 2.0654 85.319 84.218 86.284 7.6294E-06 980 193 6 0 0 0 1.6997E-10 7 45834 78.916 69.166 2 0.79431 0.98508 0 118750000 62855000 55898000 4055 962 2077 2306 6661;6662;6663;6664;6665;6666;6667 6662 1694;2874 NENTEGSPQEDGVELEGLK 19 1 0 Phospho (STY) _NENTEGS(ph)PQEDGVELEGLK_ NENTEGS(1)PQEDGVELEGLK NENT(-61.1)EGS(61.1)PQEDGVELEGLK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1067.4589 2 1062.95208 2123.8896 57990.11 0.24079 0.00025595 -1.4088 -0.0014975 -1.1681 -0.0012416 1063.45239070003 1066.95916913585 87.835 1.3071 87.835 87.043 88.35 0 823 119 10 0 0 0 3.4731E-113 3 47452 188.71 175.51 2 0.82015 1.0146 0 271680000 146550000 125140000 4056 962 2077 2306 6668;6669;6670 6668 1694;2874 NENTEGSPQEDGVELEGLK 19 1 0 Phospho (STY) _NENTEGS(ph)PQEDGVELEGLK_ NENTEGS(1)PQEDGVELEGLK NENT(-48.55)EGS(48.55)PQEDGVELEGLK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1067.4598 2 1062.95208 2123.8896 57862.53 0.22541 0.0002396 -0.58604 -0.00062293 -0.36063 -0.00038334 1063.45319083192 1067.46020373439 88.639 1.0525 88.639 88.052 89.105 0 805 94 11 0 0 0 5.0121E-113 2 48611 185.99 185.99 2 0.88075 1.0881 0 521780000 277640000 244150000 4057 962 2077 2306 6671;6672 6672 1694;2874 NENTEGSPQEDGVELEGLK 19 1 0 Phospho (STY) _NENTEGS(ph)PQEDGVELEGLK_ NENTEGS(1)PQEDGVELEGLK NENT(-65.21)EGS(65.21)PQEDGVELEGLK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1062.9526 2 1062.95208 2123.8896 57783.62 0.6892 0.00073259 -0.186 -0.0001977 0.5032 0.00053488 1063.45372276563 1066.95885973197 90.304 4.6082 90.304 88.877 93.485 0 3141 402 13 0 0 0 1.6979E-187 6 49541 228.39 213.36 2 0.78624 0.96508 0 9900800000 5558700000 4342100000 4058 962 2077 2306 6673;6674;6675;6676;6677;6678 6674 1694;2874 NENTEGSPQEDGVELEGLK 19 1 0 Phospho (STY) _NENTEGS(ph)PQEDGVELEGLK_ NENTEGS(1)PQEDGVELEGLK NENT(-57.49)EGS(57.49)PQEDGVELEGLK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1062.953 2 1062.95208 2123.8896 NaN NaN NaN -0.81828 -0.0008698 NaN NaN NaN NaN 86.322 1.8059 86.322 85.237 87.043 0 0 0 0 4.4092E-148 1 46749 184.32 162.11 2 NaN NaN 0 433510000 433510000 0 4059 962 2077 2306 6679 6679 1694;2874 NENTEGSPQEDGVELEGLK 19 1 0 Phospho (STY) _NENTEGS(ph)PQEDGVELEGLK_ NENT(0.197)EGS(0.803)PQEDGVELEGLK NENT(-6.09)EGS(6.09)PQEDGVELEGLK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1062.9548 2 1062.95208 2123.8896 NaN NaN NaN -0.674 -0.00071643 NaN NaN NaN NaN 95.715 0.43456 95.715 95.617 96.052 0 0 0 0 3.1281E-05 1 54004 49.298 36.531 2 NaN NaN 0 12133000 12133000 0 4060 962 2077 2306 6680 6680 1694;2874 NENTEGSPQEDGVELEGLK 19 1 0 Phospho (STY) _NENT(ph)EGSPQEDGVELEGLK_ NENT(0.5)EGS(0.5)PQEDGVELEGLK NENT(0)EGS(0)PQEDGVELEGLK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1067.459 2 1062.95208 2123.8896 NaN NaN NaN -3.1505 -0.0033489 NaN NaN NaN NaN 99.301 0.86534 99.301 98.708 99.573 0 0 0 0 6.7694E-05 1 56600 49.31 35.052 2 NaN NaN 0 13282000 0 13282000 4061 962 2077 2306 6681 6681 1694;2874 NENTEGSPQEDGVELEGLK 19 1 0 Phospho (STY) _NENTEGS(ph)PQEDGVELEGLK_ NENT(0.257)EGS(0.743)PQEDGVELEGLK NENT(-4.61)EGS(4.61)PQEDGVELEGLK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1066.96 2 1062.95208 2123.8896 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.999 1 95.999 95.499 96.499 0 0 0 0 0.0031027 1 54029 41.621 28.193 2 4062 962 2077 2306 6682 6682 1694;2874 NENTEGSPQEDGVELEGLK 19 1 0 Phospho (STY) _NENTEGS(ph)PQEDGVELEGLK_ NENT(0.006)EGS(0.994)PQEDGVELEGLK NENT(-22.07)EGS(22.07)PQEDGVELEGLK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1062.9537 2 1062.95208 2123.8896 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.724 1 96.724 96.224 97.224 0 0 0 0 2.0381E-10 1 54589 79.875 66.738 2 4063 962 2077 2306 6683 6683 1694;2874 NENTEGSPQEDGVELEGLK 19 1 0 Phospho (STY) _NENT(ph)EGSPQEDGVELEGLK_ NENT(0.5)EGS(0.5)PQEDGVELEGLK NENT(0)EGS(0)PQEDGVELEGLK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1063.5131 2 1062.95208 2123.8896 59275.68 0.91949 0.00097737 -1.7871 -0.0018996 -0.8676 -0.00092221 1062.95194092476 1067.45739007175 99.634 0.32763 99.634 99.522 99.849 0 46 26 4 0 0 0 0.00065805 1 56770 41.092 41.092 2 1.1919 1.4418 0 17134000 10805000 6329100 4064 962 2077 2306 6684 6684 1694;2874 NENTEGSPQEDGVELEGLK 19 1 0 Phospho (STY) _NENT(ph)EGSPQEDGVELEGLK_ NENT(0.5)EGS(0.5)PQEDGVELEGLK NENT(0)EGS(0)PQEDGVELEGLK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 709.305 3 708.970477 2123.8896 71636.19 1.1848 0.00084002 -0.17513 -0.00012416 1.0097 0.00071586 708.970280024144 711.641769099003 78.242 1.9118 78.242 77.728 79.64 0 1152 179 13 0 0 0 2.0217E-07 2 49801 58.997 58.997 2 1.4775 0.987 0 232520000 92918000 139600000 4065 962 2077 2306 6685;6686 6686 1694;2874 NENTEGSPQEDGVELEGLK 19 1 0 Phospho (STY) _NENTEGS(ph)PQEDGVELEGLK_ NENTEGS(1)PQEDGVELEGLK NENT(-66.58)EGS(66.58)PQEDGVELEGLK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1063.4546 2 1062.95208 2123.8896 57985.74 0.91376 0.00097128 -0.0036065 -3.8335E-06 0.91015 0.00096745 1063.45367072093 1066.95922253847 89.813 2.6188 89.813 88.837 91.455 -7.6294E-06 1603 251 12 0 0 0 7.1691E-262 4 58176 255.24 255.24 2 1.4473 0.96463 0 893660000 359550000 534110000 4066 962 2077 2306 6687;6688;6689;6690 6690 1694;2874 NENTEGSPQEDGVELEGLK 19 1 0 Phospho (STY) _NENTEGS(ph)PQEDGVELEGLK_ NENT(0.25)EGS(0.75)PQEDGVELEGLK NENT(-4.77)EGS(4.77)PQEDGVELEGLK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1063.4542 2 1062.95208 2123.8896 57397.82 0.70583 0.00075026 -1.3821 -0.0014691 -0.67626 -0.00071883 1063.45094111441 1066.95938359397 92.199 1.7916 92.199 90.982 92.774 0 976 176 10 0 0 0 8.8697E-10 2 59381 74.744 74.744 2 1.466 0.97855 0 366980000 150420000 216560000 4067 962 2077 2306 6691;6692 6692 1694;2874 NENTEGSPQEDGVELEGLK 19 1 0 Phospho (STY) _NENTEGS(ph)PQEDGVELEGLK_ NENTEGS(1)PQEDGVELEGLK NENT(-43.13)EGS(43.13)PQEDGVELEGLK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1063.4548 2 1062.95208 2123.8896 57070.14 0.57836 0.00061477 0.12138 0.00012902 0.69974 0.00074379 1063.45399379306 1066.95940459843 93.023 0.88333 93.023 92.659 93.542 0 818 87 12 0 0 0 3.6907E-63 2 59896 153.86 153.86 2 1.4796 0.98612 0 929580000 369760000 559820000 4068 962 2077 2306 6693;6694 6694 1694;2874 NENTEGSPQEDGVELEGLK 19 1 0 Phospho (STY) _NENTEGS(ph)PQEDGVELEGLK_ NENTEGS(1)PQEDGVELEGLK NENT(-51.58)EGS(51.58)PQEDGVELEGLK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1066.9598 2 1062.95208 2123.8896 56984.27 0.52584 0.00055894 -0.52188 -0.00055474 0.003958 4.2071E-06 1063.45497456828 1066.95950619193 93.763 4.4696 93.763 93.496 97.965 0 3310 429 14 0 0 0 1.4219E-73 5 60286 162.76 147.88 2 1.4322 0.95094 0 9170900000 3555500000 5615400000 4069 962 2077 2306 6695;6696;6697;6698;6699 6695 1694;2874 NENTEGSPQEDGVELEGLK 19 1 0 Phospho (STY) _NENTEGS(ph)PQEDGVELEGLK_ NENT(0.001)EGS(0.999)PQEDGVELEGLK NENT(-32.36)EGS(32.36)PQEDGVELEGLK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1067.4584 2 1062.95208 2123.8896 58181.86 0.84098 0.00089392 -0.96153 -0.0010221 -0.12055 -0.00012814 1063.45290123158 1067.45901722033 143.86 0.41681 143.86 143.55 143.97 1.5259E-05 225 43 8 0 0 0 1.1799E-17 1 88732 98.165 98.165 2 1.4694 1.259 0 4093400 1582300 2511100 4070 962 2077 2306 6700 6700 1694;2874 NENTEGSPQEDGVELEGLK 19 1 0 2 Phospho (STY) _NENT(ph)EGS(ph)PQEDGVELEGLK_ NENT(1)EGS(1)PQEDGVELEGLK NENT(100.21)EGS(100.21)PQEDGVELEGLK 0 0 2 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1103.9391 2 1102.93524 2203.85593 58916.93 0.487 0.00053713 -0.20164 -0.0002224 0.28535 0.00031473 1103.43659892626 1106.94177116181 98.275 1.0324 98.275 97.746 98.778 -7.6294E-06 632 83 11 0 0 0 2.1802E-18 2 55723 100.21 87.008 1 0.80816 1.0006 0 188520000 103710000 84815000 4071 962 2077 2307 6701;6702 6702 1694;2874 NENTEGSPQEDGVELEGLK 19 1 0 Unmodified _NENTEGSPQEDGVELEGLK_ 0 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1022.9686 2 1022.96891 2043.92327 NaN NaN NaN -0.15308 -0.00015659 NaN NaN NaN NaN 87.271 0.22466 87.271 87.123 87.348 7.6294E-06 0 0 0 0.029327 1 47438 35.836 17.92 1 NaN NaN 0 7010400 7010400 0 4072 962 2077 2308 6703 6703 NENTEGSPQEDGVELEGLK 19 1 0 Unmodified _NENTEGSPQEDGVELEGLK_ 0 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 682.315 3 682.315034 2043.92327 75161.5 1.0457 0.00071351 -0.8956 -0.00061108 0.15011 0.00010242 682.648912716802 685.319416309513 90.372 0.59417 90.372 90.022 90.616 -7.6294E-06 133 52 5 0 0 0 0.0062498 1 49607 30.767 30.767 1 1.0843 1.3589 0 27262000 15032000 12231000 4073 962 2077 2308 6704 6704 NENTEGSPQEDGVELEGLK 19 1 0 Unmodified _NENTEGSPQEDGVELEGLK_ 0 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1027.4806 2 1022.96891 2043.92327 60773.19 0.33669 0.00034442 0.55251 0.0005652 0.8892 0.00090962 1022.96982013441 1026.97611209928 83.147 0.83517 83.147 82.825 83.66 0 415 78 8 0 0 0 0.0023949 1 53185 36.529 36.529 1 1.3265 0.86534 0 43942000 18320000 25623000 4074 962 2077 2308 6705 6705 NETGLLSSIKK 11 2 0 Phospho (STY) _NETGLLS(ph)SIKK_ NETGLLS(0.5)S(0.5)IKK NET(-56.9)GLLS(0)S(0)IKK 0 0 1 1 A0A024R5Q8;Q05D32;H0YMH7;H0YNU2;H0YNW9 A0A024R5Q8 A0A024R5Q8 CTDSPL2 CTD small phosphatase-like protein 2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 635.3258 2 635.326143 1268.63773 NaN NaN NaN -0.13245 -8.4146E-05 NaN NaN NaN NaN 76.978 0.60753 76.978 76.715 77.322 0 0 0 0 0.00064903 1 39922 81.918 55.813 3 NaN NaN 0 11333000 11333000 0 4075 111 2078 2309 6706 6706 157;158 NEVTPSSTTASVAR 14 0 1 Phospho (STY) _NEVT(ph)PSSTTASVAR_ NEVT(0.959)PS(0.016)S(0.014)T(0.004)T(0.004)AS(0.004)VAR NEVT(17.71)PS(-17.71)S(-18.33)T(-24.35)T(-24.35)AS(-24.35)VAR 0 0 1 0 B3KWI2;Q8IZT6 B3KWI2 B3KWI2 ASPM Abnormal spindle-like microcephaly-associated protein ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 750.3406 2 750.34051 1498.66647 NaN NaN NaN -0.24378 -0.00018292 NaN NaN NaN NaN 52.77 0.54857 52.77 52.586 53.135 0 0 0 0 0.012305 1 21947 43.184 27.796 6 NaN NaN 0 2868700 2868700 0 4076 606 2079 2310 6707 6707 2782 NFDFEGSLSPVIAPK 15 1 0 Phospho (STY) _NFDFEGSLS(ph)PVIAPK_ NFDFEGS(0.008)LS(0.992)PVIAPK NFDFEGS(-21.1)LS(21.1)PVIAPK 0 0 1 0 Q9H1A4;H0Y564 Q9H1A4 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 855.9128 2 850.900203 1699.78585 66680.67 0.88255 0.00075096 -0.083017 -7.0639E-05 0.79953 0.00068032 850.899972146862 854.907076550518 125.03 0.65409 125.03 124.74 125.4 0 324 62 7 0 0 0 3.6685E-18 2 75691 115.58 101.35 2 1.0983 1.393 0 36440000 14798000 21643000 4077 1203 2080 2311 6708;6709 6709 2394;2395 NFDFEGSLSPVIAPK 15 1 0 2 Phospho (STY) _NFDFEGS(ph)LS(ph)PVIAPK_ NFDFEGS(1)LS(1)PVIAPK NFDFEGS(70.98)LS(70.98)PVIAPK 0 0 2 0 Q9H1A4;H0Y564 Q9H1A4 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 894.8909 2 890.883368 1779.75218 64692.63 0.80752 0.0007194 0.03231 2.8785E-05 0.83983 0.00074819 890.883364283459 894.890444530225 130.61 0.78682 130.61 130.27 131.06 0 459 72 9 0 0 0 0.00018691 2 79310 70.98 61.791 1 0.83239 1.0507 0 47482000 25775000 21707000 4078 1203 2080 2312 6710;6711 6710 2394;2395 NFFNELSHK 9 1 0 Unmodified _NFFNELSHK_ 0 0 0 0 Q15021;B4E0B7;B3KMS0;B3KY03 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 568.28 2 568.28018 1134.54581 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.65 1 111.65 111.15 112.15 0 0 0 0 0.00010627 1 66115 107.69 77.618 1 4079 1067 2081 2313 6712 6712 NFFNELSHK 9 1 0 Unmodified _NFFNELSHK_ 0 0 0 0 Q15021;B4E0B7;B3KMS0;B3KY03 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 568.2803 2 568.28018 1134.54581 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.44 1 112.44 111.94 112.94 7.6294E-06 0 0 0 0.0039778 1 66712 70.856 45.119 1 4080 1067 2081 2313 6713 6713 NFGSYVTHETK 11 1 0 Unmodified _NFGSYVTHETK_ 0 0 0 0 Q6FGH9;Q96FJ2;P63167 Q6FGH9 Q6FGH9 DNCL1;DYNLL2;DYNLL1 Dynein light chain 2, cytoplasmic;Dynein light chain 1, cytoplasmic MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 645.8146 2 641.806759 1281.59897 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.091 1 82.091 81.591 82.591 0 0 0 0 0.00017114 1 43816 114.89 100.69 1 4081 1022 2082 2314 6714 6714 NFQIIEEDAALVEIGPR 17 0 1 Unmodified _NFQIIEEDAALVEIGPR_ 0 0 0 0 Q8TDN6;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 962.5062 2 957.501997 1912.98944 62415.51 0.64671 0.00061923 0.056425 5.4027E-05 0.70314 0.00067325 957.501810612789 962.506108499033 133.36 0.12593 133.36 133.28 133.41 0 51 7 9 0 0 0 1.1807E-274 2 81146 267.93 258.88 1 0.88985 1.1234 0 92508000 49520000 42988000 4082 1163 2083 2315 6715;6716 6716 NFSNSPGPYVFCITEK 16 1 0 Phospho (STY) _NFS(ph)NSPGPYVFCITEK_ NFS(0.496)NS(0.496)PGPY(0.008)VFCITEK NFS(0)NS(0)PGPY(-18.2)VFCIT(-34.75)EK 0 0 1 0 A0A1B0GV48;D6RBC4;Q8NAP3;D6RJE1;D6RE69;D6R9I1;B4DYR8 A0A1B0GV48 A0A1B0GV48 ZBTB38 Zinc finger and BTB domain-containing protein 38 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 974.4271 2 970.418434 1938.82232 62035.05 0.75926 0.0007368 0.3881 0.00037662 1.1474 0.0011134 970.418029265781 974.425494008165 118.35 0.81905 118.35 117.84 118.66 0 363 70 8 0 0 0 0.00062196 1 70932 43.544 29.125 4 0.58935 0.73056 0 24328000 12976000 11352000 4083 386 2084 2316 6717 6717 658;659 NFSSEIEDLEK 11 1 0 2 Phospho (STY) _NFS(ph)S(ph)EIEDLEK_ NFS(1)S(1)EIEDLEK NFS(88.1)S(88.1)EIEDLEK 0 0 2 0 A8MQD4;Q7Z3K6 A8MQD4 A8MQD4 MIER3 Mesoderm induction early response protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 739.7837 2 735.775495 1469.53644 74671.28 1.1908 0.00087614 -0.17677 -0.00013006 1.014 0.00074608 735.775262546111 739.782400065974 128.3 0.50809 128.3 127.95 128.46 0 103 45 5 0 0 0 0.00021273 1 77903 88.101 77.577 1 0.76212 0.89811 0 3765100 2075000 1690100 4084 510 2085 2317 6718 6718 874;875 NFTMDTESSVYNFEGEDYREK 21 1 1 Oxidation (M) _NFTM(ox)DTESSVYNFEGEDYREK_ NFTM(1)DTESSVYNFEGEDYREK NFTM(66.54)DTESSVYNFEGEDYREK 0 1 0 1 B7ZAX9;B4DZC0;O60264 B7ZAX9 B7ZAX9 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 866.039 3 859.695586 2576.06493 66537.9 1.4073 0.0012098 -0.22651 -0.00019473 1.1808 0.0010151 860.030033851464 866.0370776783 101.35 0.93797 101.35 100.94 101.87 -7.6294E-06 210 78 6 0 0 0 5.4154E-12 2 58186 66.536 58.315 1 2.7825 3.2075 0 26219000 8216000 18003000 4085 672 2086 2318 6719;6720 6719 170 NFTPPSPFANK 11 1 0 2 Phospho (STY) _NFT(ph)PPS(ph)PFANK_ NFT(1)PPS(1)PFANK NFT(68)PPS(68)PFANK 0 0 2 0 K7EJT1;Q9NPG3 K7EJT1 K7EJT1 UBN1 Ubinuclein-1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 690.2752 2 690.275268 1378.53598 74741.86 0.71615 0.00049434 -0.025067 -1.7303E-05 0.69108 0.00047704 690.275162565629 694.282334850833 106.89 1.1078 106.89 106.17 107.28 0 233 85 4 0 0 0 0.003634 1 61986 67.997 56.283 1 0.30139 0.36177 0 15011000 11398000 3612400 4086 901 2087 2319 6721 6721 1527;2841 NFTPPSPFANK 11 1 0 Phospho (STY) _NFT(ph)PPSPFANK_ NFT(0.999)PPS(0.001)PFANK NFT(31.22)PPS(-31.22)PFANK 0 0 1 0 K7EJT1;Q9NPG3 K7EJT1 K7EJT1 UBN1 Ubinuclein-1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 650.2935 2 650.292103 1298.56965 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.27 1 104.27 103.77 104.77 7.6294E-06 0 0 0 0.024641 1 60340 50.354 29.513 2 4087 901 2087 2320 6722 6722 1527;2841 NGESASPERDRESLK 15 1 2 Phospho (STY) _NGESAS(ph)PERDRESLK_ NGES(0.066)AS(0.736)PERDRES(0.198)LK NGES(-10.49)AS(5.7)PERDRES(-5.7)LK 0 0 1 2 Q14676 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 585.5955 3 585.595017 1753.76322 78451.05 0.77748 0.00045529 -0.21508 -0.00012595 0.5624 0.00032934 585.594699311579 594.93848350585 17.917 0.25344 17.917 17.773 18.026 0 59 10 9 0 0 0 0.0003939 1 5110 48.907 41.868 3 1.0323 0.96252 0 33977000 14767000 19209000 4088 1059 2088 2321 6723 6723 1979 NGIDILVGTPGR 12 0 1 Phospho (STY) _NGIDILVGT(ph)PGR_ NGIDILVGT(1)PGR NGIDILVGT(101.32)PGR 0 0 1 0 Q9NR30;Q53FI9;B4DED6;B4DW97;A0A087WVC1;K0J110;Q9BQ39 Q9NR30 Q9NR30 DDX21;DDX50;mcdrh Nucleolar RNA helicase 2;ATP-dependent RNA helicase DDX50 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 646.3256 2 646.323934 1290.63332 NaN NaN NaN -0.14887 -9.622E-05 NaN NaN NaN NaN 110.92 0.70749 110.92 110.56 111.26 7.6294E-06 0 0 0 8.12E-10 1 65356 101.32 82.226 1 NaN NaN 0 9703100 9703100 0 4089 1214 2089 2322 6724 6724 2992 NGIDILVGTPGR 12 0 1 Phospho (STY) _NGIDILVGT(ph)PGR_ NGIDILVGT(1)PGR NGIDILVGT(125.61)PGR 0 0 1 0 Q9NR30;Q53FI9;B4DED6;B4DW97;A0A087WVC1;K0J110;Q9BQ39 Q9NR30 Q9NR30 DDX21;DDX50;mcdrh Nucleolar RNA helicase 2;ATP-dependent RNA helicase DDX50 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 651.3292 2 646.323934 1290.63332 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.7 1 110.7 110.2 111.2 0 0 0 0 1.392E-07 1 65382 125.61 99.569 1 4090 1214 2089 2322 6725 6725 2992 NGIDILVGTPGR 12 0 1 Phospho (STY) _NGIDILVGT(ph)PGR_ NGIDILVGT(1)PGR NGIDILVGT(69.92)PGR 0 0 1 0 Q9NR30;Q53FI9;B4DED6;B4DW97;A0A087WVC1;K0J110;Q9BQ39 Q9NR30 Q9NR30 DDX21;DDX50;mcdrh Nucleolar RNA helicase 2;ATP-dependent RNA helicase DDX50 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 646.3242 2 646.323934 1290.63332 76499.57 1.2654 0.00081785 -0.19702 -0.00012734 1.0684 0.00069052 646.323861706061 651.327874957147 116.59 1.0157 116.59 116.04 117.06 0 429 95 7 0 0 0 0.025015 1 75318 69.92 63.885 1 0.86124 0.64526 0 21189000 11557000 9632000 4091 1214 2089 2322 6726 6726 2992 NGKPITSEDIK 11 2 0 Unmodified _NGKPITSEDIK_ 0 0 0 1 B4E162;Q96I60;A0A0S2Z4I1;A0A024R0Y5;P08237;A0A0S2Z4A1 B4E162 B4E162 PFKM ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, muscle type MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 401.2189 3 401.218949 1200.63502 NaN NaN NaN NaN NaN NaN NaN NaN NaN 56.737 1 56.737 56.237 57.237 0 0 0 0 0.0012261 1 24701 49.35 6.0685 1 4092 35 2090 2323 6727 6727 NGPLEVAGAAVSAGHGLPAK 20 1 0 Unmodified _NGPLEVAGAAVSAGHGLPAK_ 0 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 609.0018 3 605.995242 1814.9639 80950.59 0.93336 0.00056561 -0.066659 -4.0395E-05 0.8667 0.00052522 605.995273641885 608.666603920095 105.93 0.53905 105.93 105.78 106.32 7.6294E-06 119 36 5 0 0 0 9.4112E-06 1 61496 50.425 50.425 1 1.3488 1.6029 0 11510000 4484800 7025000 4093 935 2091 2324 6728 6728 NGPLEVAGAAVSAGHGLPAK 20 1 0 Unmodified _NGPLEVAGAAVSAGHGLPAK_ 0 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 608.6675 3 605.995242 1814.9639 NaN NaN NaN 0.0047749 2.8936E-06 NaN NaN NaN NaN 95.598 0.20227 95.598 95.46 95.662 0 0 0 0 0.00063592 1 61563 47.814 29.897 1 NaN NaN 0 2418600 0 2418600 4094 935 2091 2324 6729 6729 NGSTAVAESVASPQK 15 1 0 Phospho (STY) _NGSTAVAESVAS(ph)PQK_ NGST(0.001)AVAES(0.342)VAS(0.656)PQK NGS(-32.12)T(-28.34)AVAES(-2.83)VAS(2.83)PQK 0 0 1 0 B7Z3E7;A6NNK5;Q12888;C9JXV0;A8KA50 B7Z3E7 B7Z3E7 TP53BP1 Tumor suppressor p53-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 767.3561 2 763.348335 1524.68212 70955.54 0.75303 0.00057483 0.084753 6.4696E-05 0.83779 0.00063952 763.34793559715 767.355923697802 49.572 0.90404 49.572 49.043 49.947 0 299 76 5 0 0 0 0.0014021 1 19766 45.083 36.978 4 0.92083 1.092 0 7627000 3629100 3998000 4095 430 2092 2325 6730 6730 745 NGTLILSPVDIK 12 1 0 Phospho (STY) _NGTLILS(ph)PVDIK_ NGTLILS(1)PVDIK NGT(-98.56)LILS(98.56)PVDIK 0 0 1 0 Q5TBI2;Q8NDD1 Q5TBI2 Q5TBI2 C1orf131 Uncharacterized protein C1orf131 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 679.3635 2 675.357443 1348.70033 73742.38 0.77638 0.00052433 -0.13189 -8.9071E-05 0.64449 0.00043526 675.357493134589 679.364258003645 118.53 1.0672 118.53 118.13 119.19 0 603 94 10 0 0 0 1.0657E-25 2 70971 145.6 119.09 2 1.0311 1.2746 0 387620000 191170000 196450000 4096 1106 2093 2326 6731;6732 6731 2095 NGTLILSPVDIK 12 1 0 Phospho (STY) _NGTLILS(ph)PVDIK_ NGTLILS(1)PVDIK NGT(-65.22)LILS(65.22)PVDIK 0 0 1 0 Q5TBI2;Q8NDD1 Q5TBI2 Q5TBI2 C1orf131 Uncharacterized protein C1orf131 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 675.3581 2 675.357443 1348.70033 74198.93 0.98724 0.00066674 -0.059147 -3.9945E-05 0.92809 0.00062679 675.357691088218 679.364412521905 126.18 1.2348 126.18 125.63 126.86 7.6294E-06 722 112 12 0 0 0 0.00058502 3 81708 81.789 72.102 2 1.3091 0.87321 0 560200000 245720000 314480000 4097 1106 2093 2326 6733;6734;6735 6735 2095 NGTLILSPVDIKK 13 2 0 Phospho (STY) _NGTLILS(ph)PVDIKK_ NGTLILS(1)PVDIKK NGT(-114.83)LILS(114.83)PVDIKK 0 0 1 1 Q5TBI2;Q8NDD1 Q5TBI2 Q5TBI2 C1orf131 Uncharacterized protein C1orf131 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 739.4057 2 739.404924 1476.7953 70786.08 0.89544 0.00066209 0.21168 0.00015652 1.1071 0.00081861 739.404937052788 747.419287568597 107.2 1.0497 107.2 106.74 107.79 0 511 85 8 0 0 0 1.4522E-42 2 62274 157.86 149.45 2 1.0447 1.3539 0 152560000 70120000 82442000 4098 1106 2094 2327 6736;6737 6736 2095 NGTLILSPVDIKK 13 2 0 Phospho (STY) _NGTLILS(ph)PVDIKK_ NGTLILS(1)PVDIKK NGT(-90.46)LILS(90.46)PVDIKK 0 0 1 1 Q5TBI2;Q8NDD1 Q5TBI2 Q5TBI2 C1orf131 Uncharacterized protein C1orf131 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 747.4204 2 739.404924 1476.7953 70704.64 1.1145 0.00082403 0.45928 0.00033959 1.5737 0.0011636 739.405189695796 747.419451601525 105.5 1.597 105.5 104.79 106.39 0 920 150 9 0 0 0 6.1249E-17 3 68049 125.28 116.75 2 1.3486 1.0021 0 164070000 68926000 95145000 4099 1106 2094 2327 6738;6739;6740 6740 2095 NGTLILSPVDIKK 13 2 0 Phospho (STY) _NGTLILS(ph)PVDIKK_ NGT(0.002)LILS(0.998)PVDIKK NGT(-28.09)LILS(28.09)PVDIKK 0 0 1 1 Q5TBI2;Q8NDD1 Q5TBI2 Q5TBI2 C1orf131 Uncharacterized protein C1orf131 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 498.6152 3 493.272375 1476.7953 86125.52 0.60086 0.00029639 -0.10276 -5.0689E-05 0.4981 0.0002457 493.27227935789 498.615093317844 105.39 1.2697 105.39 104.83 106.1 0 570 118 7 0 0 0 0.0024785 1 67938 41.422 39.656 2 1.3368 1.0233 0 47125000 19931000 27194000 4100 1106 2094 2327 6741 6741 2095 NGTSGSDSPGQAVEAEEIVK 20 1 0 Phospho (STY) _NGTSGSDS(ph)PGQAVEAEEIVK_ NGT(0.001)S(0.29)GS(0.116)DS(0.593)PGQAVEAEEIVK NGT(-27.18)S(-3.11)GS(-7.08)DS(3.11)PGQAVEAEEIVK 0 0 1 0 A0A024R5Q8;Q05D32 A0A024R5Q8 A0A024R5Q8 CTDSPL2 CTD small phosphatase-like protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1031.9567 2 1027.94934 2053.88412 60383.95 0.42638 0.00043829 -0.0032496 -3.3405E-06 0.42313 0.00043495 1028.45065246647 1031.95633358797 87.139 1.1947 87.139 86.619 87.814 0 658 112 8 0 0 0 9.6033E-37 5 47540 121.63 106.24 4 1.006 1.2483 0 111840000 56410000 55433000 4101 111 2095 2328 6742;6743;6744;6745;6746 6744 159;160;161;2641 NGTSGSDSPGQAVEAEEIVK 20 1 0 Phospho (STY) _NGTSGSDS(ph)PGQAVEAEEIVK_ NGT(0.057)S(0.049)GS(0.049)DS(0.846)PGQAVEAEEIVK NGT(-11.71)S(-12.4)GS(-12.4)DS(11.71)PGQAVEAEEIVK 0 0 1 0 A0A024R5Q8;Q05D32 A0A024R5Q8 A0A024R5Q8 CTDSPL2 CTD small phosphatase-like protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1031.9573 2 1027.94934 2053.88412 59397.93 0.46351 0.00047647 0.59666 0.00061333 1.0602 0.0010898 1027.94986306379 1031.95699023078 91.784 1.1905 91.784 91.422 92.612 0 676 117 8 0 0 0 4.3837E-05 1 59049 47.016 32.14 4 1.6777 1.12 0 332400000 132220000 200180000 4102 111 2095 2328 6747 6747 159;160;161;2641 NGTSGSDSPGQAVEAEEIVK 20 1 0 2 Phospho (STY) _NGT(ph)S(ph)GSDSPGQAVEAEEIVK_ NGT(0.5)S(0.5)GS(0.5)DS(0.5)PGQAVEAEEIVK NGT(0)S(0)GS(0)DS(0)PGQAVEAEEIVK 0 0 2 0 A0A024R5Q8;Q05D32 A0A024R5Q8 A0A024R5Q8 CTDSPL2 CTD small phosphatase-like protein 2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1071.9431 2 1067.9325 2133.85045 NaN NaN NaN -0.22898 -0.00024454 NaN NaN NaN NaN 96.247 0.55987 96.247 96.064 96.624 0 0 0 0 2.1188E-10 2 54195 67.115 57.366 6 NaN NaN 0 11369000 0 11369000 4103 111 2095 2329 6748;6749 6748 159;160;161;2641 NGVMPSHFSR 10 0 1 Oxidation (M) _NGVM(ox)PSHFSR_ NGVM(1)PSHFSR NGVM(54.26)PSHFSR 0 1 0 0 A0A075B6E2;B0ZBD0;Q8WVX7;P39019 A0A075B6E2 A0A075B6E2 RPS19 40S ribosomal protein S19 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 386.5177 3 383.181952 1146.52403 96827.28 -0.12269 -4.7013E-05 0.20537 7.8696E-05 0.082683 3.1683E-05 383.182025122405 386.518085282056 65.597 0.38553 65.597 65.364 65.749 0 97 28 4 0 0 0 0.0032449 1 31551 54.259 40.052 1 1.307 1.6404 0 41870000 19041000 22829000 4104 235 2096 2330 6750 6750 57 NHDTAISSHTVK 12 1 0 Unmodified _NHDTAISSHTVK_ 0 0 0 0 E9PPJ1;Q8NG31 E9PPJ1 E9PPJ1 CASC5 Protein CASC5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 437.2215 3 437.221352 1308.64223 90401.16 0.13017 5.6915E-05 -0.13334 -5.8298E-05 -0.0031638 -1.3833E-06 437.22119814746 439.892675568851 80.025 0.9403 80.025 79.614 80.555 0 372 86 6 0 0 0 0.00065407 2 42169 74.987 60.903 1 0.81136 1.0097 0 76220000 41109000 35111000 4105 814 2097 2331 6751;6752 6751 NHGSSPEQVVRPK 13 1 1 Phospho (STY) _NHGSS(ph)PEQVVRPK_ NHGS(0.224)S(0.776)PEQVVRPK NHGS(-5.39)S(5.39)PEQVVRPK 0 0 1 1 W0S1J7;O43164 W0S1J7 W0S1J7 Pe7Fe14;PJA2 E3 ubiquitin-protein ligase Praja-2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 511.5825 3 505.575228 1513.70386 86171.82 0.1407 7.1134E-05 -0.42474 -0.00021474 -0.28404 -0.0001436 505.574974691293 511.582681697618 66.774 0.21245 66.774 66.673 66.885 0 53 14 5 0 0 0 0.00076665 2 32635 69.431 61.455 2 1.3376 1.5624 0 34299000 13920000 20379000 4106 924 2098 2332 6753;6754 6753 1553;1554 NHGSSPEQVVRPK 13 1 1 Phospho (STY) _NHGS(ph)SPEQVVRPK_ NHGS(0.5)S(0.5)PEQVVRPK NHGS(0)S(0)PEQVVRPK 0 0 1 1 W0S1J7;O43164 W0S1J7 W0S1J7 Pe7Fe14;PJA2 E3 ubiquitin-protein ligase Praja-2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 511.5828 3 505.575228 1513.70386 84499.52 0.3169 0.00016022 0.24124 0.00012196 0.55814 0.00028218 505.575450045481 511.58280789793 19.947 0.32575 19.947 19.786 20.112 0 76 15 8 0 0 0 4.1154E-05 2 6959 85.988 78.013 2 2.4561 1.8931 0 41077000 11897000 29180000 4107 924 2098 2332 6755;6756 6756 1553;1554 NHSGNDERDEEDEER 15 0 2 Unmodified _NHSGNDERDEEDEER_ 0 0 0 1 A0A0D9SGE8;B4E138;Q8IWS0 A0A0D9SGE8;Q8IWS0 Q8IWS0 PHF6 PHD finger protein 6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 617.5812 3 610.90889 1829.70484 80386.39 0.58279 0.00035603 0.055765 3.4067E-05 0.63856 0.0003901 611.243350398206 617.580974186294 64.446 0.27675 64.446 64.299 64.576 0 70 20 5 0 0 0 0.0022409 2 30682 62.378 53.436 1 0.6443 0.77357 0 14994000 10127000 4866600 4108 335;1145 2099 2333 6757;6758 6758 NHSGNDERDEEDEERESK 18 1 2 Unmodified _NHSGNDERDEEDEERESK_ 0 0 0 2 A0A0D9SGE8;B4E138;Q8IWS0 A0A0D9SGE8;Q8IWS0 Q8IWS0 PHF6 PHD finger protein 6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 544.4759 4 544.475883 2173.87442 79431.03 0.50053 0.00027253 -0.11332 -6.1702E-05 0.3872 0.00021082 544.726575838744 551.483552532755 65.344 0.66919 65.344 65.093 65.762 -7.6294E-06 294 49 9 0 0 0 4.0773E-11 1 31323 84.94 84.94 1 0.68828 0.80955 0 150220000 87704000 62518000 4109 335;1145 2100 2334 6759 6759 NHSGSRTPPVALNSSR 16 0 2 3 Phospho (STY) _NHS(ph)GS(ph)RT(ph)PPVALNSSR_ NHS(1)GS(1)RT(1)PPVALNSSR NHS(48.35)GS(45.64)RT(45.64)PPVALNS(-45.64)S(-45.8)R 0 0 3 1 A0A140VK53;Q9UQ35;O60382;A0AUK8 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 640.5908 3 640.59025 1918.74892 75503.7 0.91811 0.00058813 -0.18282 -0.00011711 0.73529 0.00047102 640.59020084601 647.2623443334 56.898 1.6248 56.898 56.161 57.786 0 830 135 8 0 0 0 0.00012371 1 24918 55.453 55.453 10 0.91106 1.1354 0 131910000 66934000 64980000 4110 383 2101 2335 6760 6760 617;618;2701 NHSGSRTPPVALNSSR 16 0 2 2 Phospho (STY) _NHS(ph)GSRT(ph)PPVALNSSR_ NHS(0.889)GS(0.381)RT(0.722)PPVALNS(0.004)S(0.004)R NHS(7.55)GS(-3.53)RT(3.53)PPVALNS(-24.61)S(-24.61)R 0 0 2 1 A0A140VK53;Q9UQ35;O60382;A0AUK8 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 620.6072 3 613.934806 1838.78259 75955.52 0.62506 0.00038374 0.074524 4.5753E-05 0.69958 0.0004295 613.934992940503 620.606756604207 63.52 0.74754 63.52 63.066 63.814 3.8147E-06 271 62 8 0 0 0 0.00062033 1 29979 45.707 38.115 10 0.88416 1.1006 0 100090000 50619000 49476000 4111 383 2101 2336 6761 6761 617;618;2701 NHSGSRTPPVALNSSR 16 0 2 2 Phospho (STY) _NHSGS(ph)RT(ph)PPVALNSSR_ NHS(0.507)GS(0.626)RT(0.864)PPVALNS(0.001)S(0.001)R NHS(-1.21)GS(1.21)RT(5.65)PPVALNS(-29.66)S(-30)R 0 0 2 1 A0A140VK53;Q9UQ35;O60382;A0AUK8 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 620.6074 3 613.934806 1838.78259 77836.78 0.58662 0.00036014 0.12411 7.6195E-05 0.71073 0.00043634 613.934845358693 620.606945518741 64.199 0.80399 64.199 63.814 64.618 0 283 56 8 0 0 0 0.0003428 1 30674 51.566 42.03 10 0.88735 1.1035 0 78217000 39359000 38858000 4112 383 2101 2336 6762 6762 617;618;2701 NHVDESPVEFPATR 14 0 1 Phospho (STY) _NHVDES(ph)PVEFPATR_ NHVDES(0.985)PVEFPAT(0.015)R NHVDES(18.27)PVEFPAT(-18.27)R 0 0 1 0 Q59H79;Q9UBC3;Q2PJS8 Q59H79 Q59H79 DNMT3B DNA (cytosine-5)-methyltransferase 3B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 844.8736 2 839.367059 1676.71956 66649.05 0.77756 0.00065266 0.030135 2.5294E-05 0.8077 0.00067796 839.869004243625 844.370907043204 82.402 0.65336 82.402 81.819 82.473 -7.6294E-06 157 61 5 0 0 0 0.0027606 1 43649 55.213 48.632 2 0.91818 1.138 0 34894000 17168000 17726000 4113 1093 2102 2337 6763 6763 2059 NHVDESPVEFPATR 14 0 1 Phospho (STY) _NHVDES(ph)PVEFPATR_ NHVDES(1)PVEFPATR NHVDES(90.68)PVEFPAT(-90.68)R 0 0 1 0 Q59H79;Q9UBC3;Q2PJS8 Q59H79 Q59H79 DNMT3B DNA (cytosine-5)-methyltransferase 3B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 844.3714 2 839.367059 1676.71956 66716.7 0.69035 0.00057946 -0.0084427 -7.0865E-06 0.68191 0.00057237 839.367293543741 844.371382176196 82.712 1.4964 82.712 81.918 83.414 0 375 138 6 0 0 0 8.847E-104 2 44362 195.23 174.8 2 1.0151 1.2809 0 69999000 30536000 39463000 4114 1093 2102 2337 6764;6765 6764 2059 NHVDESPVEFPATR 14 0 1 Phospho (STY) _NHVDES(ph)PVEFPATR_ NHVDES(1)PVEFPATR NHVDES(51.6)PVEFPAT(-51.6)R 0 0 1 0 Q59H79;Q9UBC3;Q2PJS8 Q59H79 Q59H79 DNMT3B DNA (cytosine-5)-methyltransferase 3B MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 844.3714 2 839.367059 1676.71956 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.135 1 82.135 81.635 82.635 0 0 0 0 8.7098E-23 1 43850 145.69 129.49 2 4115 1093 2102 2337 6766 6766 2059 NHVDESPVEFPATR 14 0 1 Phospho (STY) _NHVDES(ph)PVEFPATR_ NHVDES(1)PVEFPATR NHVDES(48.49)PVEFPAT(-48.49)R 0 0 1 0 Q59H79;Q9UBC3;Q2PJS8 Q59H79 Q59H79 DNMT3B DNA (cytosine-5)-methyltransferase 3B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 844.3732 2 839.367059 1676.71956 66053.3 1.0604 0.00089007 0.24653 0.00020693 1.3069 0.001097 839.368277598251 844.371322891216 71.169 1.2441 71.169 70.691 71.935 0 653 111 10 0 0 0 1.3399E-12 1 44921 109.04 97.601 2 2.0327 1.3527 0 164860000 56631000 108230000 4116 1093 2102 2337 6767 6767 2059 NIDDGTSDRPYSHALVAGIDR 21 0 2 Unmodified _NIDDGTSDRPYSHALVAGIDR_ 0 0 0 1 E4W6B6;B2R4D8;A0A024R1V4;K7ELC7;P61353 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 758.0377 3 758.036605 2271.08799 69978.9 0.95345 0.00072275 0.14196 0.00010761 1.0954 0.00083036 758.036794477304 764.708845103202 118.72 2.1708 118.72 117.09 119.26 0 686 194 9 0 0 0 7.0903E-36 5 70826 116.65 98.784 1 0.82022 1.017 0 38874000 24205000 14670000 4117 53 2103 2338 6768;6769;6770;6771;6772 6769 NIDDGTSDRPYSHALVAGIDR 21 0 2 Unmodified _NIDDGTSDRPYSHALVAGIDR_ 0 0 0 1 E4W6B6;B2R4D8;A0A024R1V4;K7ELC7;P61353 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 569.0306 4 568.779273 2271.08799 78620.27 0.6409 0.00036453 0.51459 0.00029269 1.1555 0.00065722 569.030712934077 573.783457832673 118.73 1.4915 118.73 117.65 119.14 7.6294E-06 361 133 8 0 0 0 7.6606E-07 1 71260 49.528 34.106 1 0.83999 1.0394 0 32889000 14917000 17972000 4118 53 2103 2338 6773 6773 NIDDGTSDRPYSHALVAGIDR 21 0 2 Unmodified _NIDDGTSDRPYSHALVAGIDR_ 0 0 0 1 E4W6B6;B2R4D8;A0A024R1V4;K7ELC7;P61353 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 758.3716 3 758.036605 2271.08799 69978.9 0.86903 0.00065875 0.24693 0.00018718 1.116 0.00084594 758.371191237881 764.70909937546 119.5 0.74923 119.5 119.26 120.01 -7.6294E-06 176 65 5 0 0 0 7.879E-12 1 71939 64.723 49.301 1 0.87805 1.0752 0 23713000 11881000 11832000 4119 53 2103 2338 6774 6774 NIDDGTSDRPYSHALVAGIDR 21 0 2 Unmodified _NIDDGTSDRPYSHALVAGIDR_ 0 0 0 1 E4W6B6;B2R4D8;A0A024R1V4;K7ELC7;P61353 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 758.0369 3 758.036605 2271.08799 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.34 1 117.34 116.84 117.84 -7.6294E-06 0 0 0 0.0017603 1 70265 41.521 31.772 1 4120 53 2103 2338 6775 6775 NIDDGTSDRPYSHALVAGIDR 21 0 2 Unmodified _NIDDGTSDRPYSHALVAGIDR_ 0 0 0 1 E4W6B6;B2R4D8;A0A024R1V4;K7ELC7;P61353 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 569.0303 4 568.779273 2271.08799 82329.86 0.53131 0.0003022 0.28611 0.00016274 0.81742 0.00046493 569.030107349446 574.034501790988 85.546 0.3012 85.546 85.383 85.685 0 106 27 7 0 0 0 0.014917 1 54883 19.21 10.716 1 0.64767 0.56093 0 11616000 6284500 5331200 4121 53 2103 2338 6776 6776 NIGNGIISSPLTGK 14 1 0 Phospho (STY) _NIGNGIISS(ph)PLTGK_ NIGNGIIS(0.077)S(0.915)PLT(0.008)GK NIGNGIIS(-10.74)S(10.74)PLT(-20.81)GK 0 0 1 0 A0A075B784;A0A024R8V6;Q9P275;B3KMW2;K7EMM6;Q9H9C5;E9PEW0 A0A075B784 A0A075B784 USP36;DUB1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 725.8702 2 725.868706 1449.72286 NaN NaN NaN NaN NaN NaN NaN NaN NaN 102.99 1 102.99 102.49 103.49 0 0 0 0 6.1026E-126 1 59425 211.82 180.19 3 4122 157 2104 2339 6777 6777 245;246 NIGNGIISSPLTGK 14 1 0 Phospho (STY) _NIGNGIIS(ph)SPLTGK_ NIGNGIIS(0.497)S(0.497)PLT(0.006)GK NIGNGIIS(0)S(0)PLT(-19.05)GK 0 0 1 0 A0A075B784;A0A024R8V6;Q9P275;B3KMW2;K7EMM6;Q9H9C5;E9PEW0 A0A075B784 A0A075B784 USP36;DUB1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 729.8761 2 725.868706 1449.72286 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.87 1 103.87 103.37 104.37 0 0 0 0 3.209E-07 1 60051 70.977 32.684 3 4123 157 2104 2339 6778 6778 245;246 NIGNGIISSPLTGK 14 1 0 Phospho (STY) _NIGNGIISS(ph)PLTGK_ NIGNGIIS(0.029)S(0.956)PLT(0.015)GK NIGNGIIS(-15.23)S(15.23)PLT(-18.09)GK 0 0 1 0 A0A075B784;A0A024R8V6;Q9P275;B3KMW2;K7EMM6;Q9H9C5;E9PEW0 A0A075B784 A0A075B784 USP36;DUB1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 725.8699 2 725.868706 1449.72286 71522.95 1.1993 0.00087055 -0.02278 -1.6535E-05 1.1765 0.00085402 725.86872997882 729.875816416907 108.38 1.3772 108.38 107.77 109.15 0 679 135 9 0 0 0 4.6586E-41 2 69955 151.56 129.47 3 1.5929 1.0633 0 114240000 43332000 70904000 4124 157 2104 2339 6779;6780 6780 245;246 NIHAAAHQVR 10 0 1 Unmodified _NIHAAAHQVR_ 0 0 0 0 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 372.8723 3 372.872218 1115.59482 98839.06 0.021316 7.9481E-06 -0.30189 -0.00011257 -0.28058 -0.00010462 372.871898762615 376.208292856665 79.211 1.5077 79.211 78.658 80.165 0 483 135 7 0 0 0 0.014498 2 41522 34.721 21.765 1 0.88677 1.1192 0 80098000 40743000 39354000 4125 1199 2105 2340 6781;6782 6781 NIHSSDWPK 9 1 0 Unmodified _NIHSSDWPK_ 0 0 0 0 G3V4E7;G3V4C6;Q5RLJ0;Q549M8;Q9Y224 G3V4E7 G3V4E7 C14orf166 UPF0568 protein C14orf166 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 546.273 2 542.26453 1082.51451 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.004 1 81.004 80.504 81.504 0 0 0 0 0.011921 1 43023 52.255 33.277 1 4126 841 2106 2341 6783 6783 NIISPPWDFR 10 0 1 Phospho (STY) _NIIS(ph)PPWDFR_ NIIS(1)PPWDFR NIIS(48.74)PPWDFR 0 0 1 0 Q5T8C6;B2RCW0;A0A024RDZ2;Q13042 Q5T8C6 Q5T8C6 CDC16 Cell division cycle protein 16 homolog MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 667.8121 2 662.80792 1323.60129 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.64 1 131.64 131.14 132.14 0 0 0 0 0.0087075 1 80083 48.741 24.398 1 4127 233 2107 2342 6784 6784 361 NINMDNDLEVLTSSPTR 17 0 1 Oxidation (M),Phospho (STY) _NINM(ox)DNDLEVLTSS(ph)PTR_ NINM(1)DNDLEVLTSSPTR NINMDNDLEVLT(0.001)S(0.052)S(0.751)PT(0.197)R NINM(115.87)DNDLEVLTSSPTR NINMDNDLEVLT(-31.01)S(-11.61)S(5.82)PT(-5.82)R 0 1 1 0 B4DUS4;Q9Y5T5 B4DUS4 B4DUS4 USP16 Ubiquitin carboxyl-terminal hydrolase 16 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1007.944 2 1007.943 2013.87145 61388.71 1.1112 0.00112 0.14352 0.00014466 1.2547 0.0012647 1008.44389457916 1012.94655825177 99.869 0.91192 99.869 99.376 100.29 0 299 73 6 0 0 0 1.3395E-22 4 56890 115.87 97.729 4 1.0946 1.3505 0 32660000 15119000 17541000 4128 664 2108 2343 6785;6786;6787;6788 6785 168 1108 NINTFVETPVQK 12 1 0 Phospho (STY) _NINTFVET(ph)PVQK_ NINTFVET(1)PVQK NINT(-51.87)FVET(51.87)PVQK 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 739.3617 2 735.355432 1468.69631 72726.97 0.99528 0.00073189 0.21707 0.00015962 1.2124 0.00089151 735.857195946119 739.362481741682 86.053 0.64664 86.053 85.688 86.334 0 167 60 5 0 0 0 5.434E-14 1 46327 119.25 86.999 2 0.91796 1.1393 0 24623000 9777200 14845000 4129 994 2109 2344 6789 6789 2896 NINTFVETPVQK 12 1 0 Phospho (STY) _NINTFVET(ph)PVQK_ NINTFVET(1)PVQK NINT(-51.93)FVET(51.93)PVQK 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 735.3566 2 735.355432 1468.69631 NaN NaN NaN -0.042517 -3.1265E-05 NaN NaN NaN NaN 85.748 0.1599 85.748 85.632 85.792 0 0 0 0 7.105E-07 1 46300 95.428 67.26 2 NaN NaN 0 6154400 6154400 0 4130 994 2109 2344 6790 6790 2896 NINTFVETPVQK 12 1 0 Phospho (STY) _NINTFVET(ph)PVQK_ NINT(0.005)FVET(0.995)PVQK NINT(-23.2)FVET(23.2)PVQK 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-SECPEP 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 739.3369 2 735.355432 1468.69631 73837.63 1.0914 0.0008026 -0.17507 -0.00012874 0.91637 0.00067386 735.355258609977 739.362019254593 87.939 0.95513 87.939 87.485 88.44 0 380 92 5 0 0 0 0.029669 1 56860 51.927 36.355 2 1.72 1.3278 0 16073000 5111000 10962000 4131 994 2109 2344 6791 6791 2896 NIPSPGQLDPDTR 13 0 1 Phospho (STY) _NIPS(ph)PGQLDPDTR_ NIPS(1)PGQLDPDTR NIPS(50.75)PGQLDPDT(-50.75)R 0 0 1 0 B4DIS0;A0A024R7V7;Q9P2D1 B4DIS0 B4DIS0 CHD7 Chromodomain-helicase-DNA-binding protein 7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 745.3384 2 745.33777 1488.66099 68881.05 0.81376 0.00060652 0.50524 0.00037658 1.319 0.0009831 745.338796177783 750.341942068862 92.448 1.3607 92.448 91.795 93.156 0 467 120 6 0 0 0 0.0016743 7 50912 70.332 49.379 2 0.66087 0.83394 0 72116000 45812000 26305000 4132 142 2110 2345 6792;6793;6794;6795;6796;6797;6798 6795 214 NIPSPGQLDPDTR 13 0 1 Phospho (STY) _NIPS(ph)PGQLDPDTR_ NIPS(1)PGQLDPDTR NIPS(43.41)PGQLDPDT(-43.41)R 0 0 1 0 B4DIS0;A0A024R7V7;Q9P2D1 B4DIS0 B4DIS0 CHD7 Chromodomain-helicase-DNA-binding protein 7 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 750.3431 2 745.33777 1488.66099 69701.03 0.99865 0.00074433 0.11379 8.4812E-05 1.1124 0.00082914 745.337739762621 750.342150008029 97.298 1.17 97.298 96.699 97.869 0 457 112 7 0 0 0 0.0047499 1 62548 58.676 48.723 2 1.7399 1.2551 0 27362000 10113000 17249000 4133 142 2110 2345 6799 6799 214 NISHDTFGTTYGR 13 0 1 Unmodified _NISHDTFGTTYGR_ 0 0 0 0 A8K800;Q9H7B2 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 493.5677 3 490.232028 1467.67426 86809.39 0.23797 0.00011666 -0.52886 -0.00025926 -0.29089 -0.0001426 490.232066049199 493.568054212913 85.564 0.95837 85.564 85.114 86.072 0 270 92 4 0 0 0 0.00030058 2 46040 73.927 62.872 1 1.0711 1.3216 0 32677000 17158000 15519000 4134 490 2111 2346 6800;6801 6801 NISHDTFGTTYGR 13 0 1 Unmodified _NISHDTFGTTYGR_ 0 0 0 0 A8K800;Q9H7B2 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 493.5682 3 490.232028 1467.67426 NaN NaN NaN -0.046607 -2.2848E-05 NaN NaN NaN NaN 85.014 0.28497 85.014 84.829 85.114 0 0 0 0 0.014333 1 45760 51.939 33.802 1 NaN NaN 0 12719000 0 12719000 4135 490 2111 2346 6802 6802 NISHDTFGTTYGR 13 0 1 Unmodified _NISHDTFGTTYGR_ 0 0 0 0 A8K800;Q9H7B2 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 739.8495 2 734.844404 1467.67426 NaN NaN NaN 0.33241 0.00024427 NaN NaN NaN NaN 85.363 0.33313 85.363 85.133 85.466 -7.6294E-06 0 0 0 0.020442 1 46058 39.148 21.712 1 NaN NaN 0 7632400 0 7632400 4136 490 2111 2346 6803 6803 NISHVHTMDFSPR 13 0 1 Oxidation (M) _NISHVHTM(ox)DFSPR_ NISHVHTM(1)DFSPR NISHVHTM(66.71)DFSPR 0 1 0 0 Q9Y5J1;B2RAX6 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 519.5805 3 519.580663 1555.72016 83834.02 1.0914 0.00056708 -0.012623 -6.5589E-06 1.0788 0.00056052 519.580626223715 522.916696605448 101.93 1.583 101.93 101.22 102.8 0 610 128 7 0 0 0 0.001061 4 58455 66.708 54.915 1 1.1927 1.5009 0 48533000 23409000 25124000 4137 1255 2112 2347 6804;6805;6806;6807 6805 364 NISKLSPPR 9 1 1 Phospho (STY) _NISKLS(ph)PPR_ NIS(0.003)KLS(0.997)PPR NIS(-25.5)KLS(25.5)PPR 0 0 1 1 Q6P0N0;G5E9K5;H7C1S6 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 370.5325 3 364.525146 1090.55361 98855.26 0.25045 9.1295E-05 -0.275 -0.00010025 -0.024553 -8.95E-06 364.524985896004 370.532501696087 45.039 2.9007 45.039 43.832 46.733 0 554 270 4 0 0 0 0.0058587 1 26379 50.354 40.028 2 1.3421 1.0356 0 12818000 5167200 7650900 4138 1120 2113 2348 6808 6808 2130 NISKLSPPR 9 1 1 Phospho (STY) _NISKLS(ph)PPR_ NIS(0.023)KLS(0.977)PPR NIS(-16.29)KLS(16.29)PPR 0 0 1 1 Q6P0N0;G5E9K5;H7C1S6 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 555.2962 2 546.284081 1090.55361 81387.12 0.76902 0.00042011 0.040011 2.1857E-05 0.80903 0.00044196 546.28403591617 555.29526994534 44.985 3.8788 44.985 43.477 47.356 0 1247 361 4 0 0 0 0.0066906 2 27868 59.57 52.681 2 1.3421 1.0277 0 24848000 10378000 14470000 4139 1120 2113 2348 6809;6810 6810 2130 NISKLSPPR 9 1 1 Phospho (STY) _NISKLS(ph)PPR_ NIS(0.011)KLS(0.989)PPR NIS(-19.37)KLS(19.37)PPR 0 0 1 1 Q6P0N0;G5E9K5;H7C1S6 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 364.5251 3 364.525146 1090.55361 NaN NaN NaN -0.11874 -4.3282E-05 NaN NaN NaN NaN 45.804 0.8716 45.804 45.647 46.519 -3.8147E-06 0 0 0 0.010853 1 27535 42.095 29.882 2 NaN NaN 0 4277900 4277900 0 4140 1120 2113 2348 6811 6811 2130 NISQELNMEQK 11 1 0 Oxidation (M),Phospho (STY) _NIS(ph)QELNM(ox)EQK_ NISQELNM(1)EQK NIS(1)QELNMEQK NISQELNM(70.09)EQK NIS(70.09)QELNMEQK 0 1 1 0 A0A0U1RRH6 A0A0U1RRH6 A0A0U1RRH6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 719.3122 2 715.305081 1428.59561 73689.56 0.64185 0.00045912 0.068965 4.9331E-05 0.71081 0.00050845 715.305168935443 719.312479964489 62.179 0.63263 62.179 61.899 62.531 0 140 46 4 0 0 0 0.003154 2 28889 70.089 41.806 1 0.51209 0.62213 0 17908000 12263000 5644900 4141 368 2114 2349 6812;6813 6812 87 576 NIVQHTTDSSLEEK 14 1 0 2 Phospho (STY) _NIVQHTTDS(ph)S(ph)LEEK_ NIVQHT(0.085)T(0.267)DS(0.838)S(0.811)LEEK NIVQHT(-12.47)T(-7.36)DS(8.31)S(7.36)LEEK 0 0 2 0 Q9H501;Q8IWH6;Q05C10;A0JLU5 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 880.8593 2 880.860622 1759.70669 65718.32 0.71921 0.00063353 0.026983 2.3768E-05 0.7462 0.0006573 880.860782644183 884.867964860305 56.877 0.9062 56.877 56.475 57.381 3.8147E-06 361 77 6 0 0 0 2.9042E-05 2 24723 80.746 60.365 6 0.59409 0.75384 0 38442000 21555000 16888000 4142 1206 2115 2350 6814;6815 6814 2401;2402 NIVQHTTDSSLEEK 14 1 0 Phospho (STY) _NIVQHTTDS(ph)SLEEK_ NIVQHT(0.15)T(0.068)DS(0.391)S(0.391)LEEK NIVQHT(-4.17)T(-7.6)DS(0)S(0)LEEK 0 0 1 0 Q9H501;Q8IWH6;Q05C10;A0JLU5 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 844.8863 2 840.877456 1679.74036 68240.3 0.65573 0.00055139 -0.25734 -0.00021639 0.39839 0.000335 840.877505393414 844.88489263241 61.788 0.6547 61.788 61.423 62.078 3.8147E-06 168 42 7 0 0 0 0.00018904 1 28503 73.887 65.157 4 0.84614 1.0649 0 29252000 16302000 12950000 4143 1206 2115 2351 6816 6816 2401;2402 NIVQHTTDSSLEEK 14 1 0 Phospho (STY) _NIVQHTTDS(ph)SLEEK_ NIVQHT(0.001)T(0.089)DS(0.455)S(0.455)LEEK NIVQHT(-29.35)T(-7.11)DS(0)S(0)LEEK 0 0 1 0 Q9H501;Q8IWH6;Q05C10;A0JLU5 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 563.5917 3 560.92073 1679.74036 81100.37 0.65111 0.00036522 -0.2342 -0.00013137 0.41691 0.00023385 560.920720848888 563.591694759661 61.831 0.49004 61.831 61.531 62.021 0 138 30 6 0 0 0 0.0008285 1 28649 65.943 54.028 4 0.68194 0.83453 0 19904000 10873000 9031200 4144 1206 2115 2351 6817 6817 2401;2402 NIVQHTTDSSLEEK 14 1 0 Phospho (STY) _NIVQHTTDS(ph)SLEEK_ NIVQHTT(0.006)DS(0.497)S(0.497)LEEK NIVQHT(-30.18)T(-19.28)DS(0)S(0)LEEK 0 0 1 0 Q9H501;Q8IWH6;Q05C10;A0JLU5 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 841.3787 2 840.877456 1679.74036 65273.04 0.94494 0.00079458 0.33873 0.00028483 1.2837 0.0010794 840.877620532628 844.884678165653 36.294 1.4738 36.294 35.689 37.163 0 593 123 7 0 0 0 4.2979E-06 2 20719 87.447 77.494 4 1.0272 0.68339 0 28653000 13949000 14704000 4145 1206 2115 2351 6818;6819 6819 2401;2402 NIYVLQELDNPGAK 14 1 0 Unmodified _NIYVLQELDNPGAK_ 0 0 0 0 B4DE32;B1AHC9;B2RDN9;A0A024R1N4;P12956 B4DE32 B4DE32 XRCC6 X-ray repair cross-complementing protein 6 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 787.9178 2 787.414662 1572.81477 NaN NaN NaN -0.20269 -0.0001596 NaN NaN NaN NaN 113.4 0.081253 113.4 113.38 113.46 0 0 0 0 0.00056172 1 67381 72.652 44.91 1 NaN NaN 0 2479000 2479000 0 4146 50 2116 2352 6820 6820 NKASPAVALPK 11 2 0 Phospho (STY) _NKAS(ph)PAVALPK_ NKAS(1)PAVALPK NKAS(68.03)PAVALPK 0 0 1 1 B5BUA4;Q5FBB7;A0A024R2J4 B5BUA4 B5BUA4 SGOL1 Shugoshin-like 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 596.3282 2 588.312838 1174.61112 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.549 1 72.549 72.049 73.049 0 0 0 0 0.00087195 1 36738 68.033 26.381 1 4147 691 2117 2353 6821 6821 1138 NKASPAVALPK 11 2 0 Phospho (STY) _NKAS(ph)PAVALPK_ NKAS(1)PAVALPK NKAS(106.58)PAVALPK 0 0 1 1 B5BUA4;Q5FBB7;A0A024R2J4 B5BUA4 B5BUA4 SGOL1 Shugoshin-like 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 596.3275 2 588.312838 1174.61112 79127.4 0.83033 0.0004885 0.1013 5.9596E-05 0.93163 0.00054809 588.312792732229 596.327034605709 48.724 3.3767 48.724 47.899 51.276 -3.8147E-06 971 315 6 0 0 0 1.2435E-08 5 29361 106.58 80.877 1 1.2454 1.0034 0 27192000 11220000 15972000 4148 691 2117 2353 6822;6823;6824;6825;6826 6823 1138 NKASPQSEFMPSK 13 2 0 Oxidation (M),Phospho (STY) _NKAS(ph)PQSEFM(ox)PSK_ NKASPQSEFM(1)PSK NKAS(0.927)PQS(0.072)EFMPS(0.001)K NKASPQSEFM(47.55)PSK NKAS(11.1)PQS(-11.1)EFMPS(-28.72)K 0 1 1 1 H7C1K5;B4DSL6;A8K5D9;A0A024RA49;Q9NQW6 H7C1K5 H7C1K5 ANLN Actin-binding protein anillin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 781.8486 2 773.834006 1545.65346 69580.13 0.72612 0.00056189 0.12242 9.4734E-05 0.84854 0.00065663 773.833858739197 781.848393245185 57.377 1.0706 57.377 56.927 57.998 0 292 89 5 0 0 0 0.0082731 1 24957 47.545 47.545 3 2.0617 2.3917 0 21251000 6187100 15064000 4149 178 2118 2354 6827 6827 40 277 NKASPQSEFMPSK 13 2 0 Oxidation (M),Phospho (STY) _NKAS(ph)PQSEFM(ox)PSK_ NKASPQSEFM(1)PSK NKAS(0.977)PQS(0.023)EFMPSK NKASPQSEFM(75.97)PSK NKAS(16.29)PQS(-16.29)EFMPS(-43.53)K 0 1 1 1 H7C1K5;B4DSL6;A8K5D9;A0A024RA49;Q9NQW6 H7C1K5 H7C1K5 ANLN Actin-binding protein anillin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 781.8489 2 773.834006 1545.65346 68662.06 0.9853 0.00076246 -0.35972 -0.00027836 0.62558 0.00048409 773.834058026882 781.848483726887 29.502 0.84214 29.502 29.162 30.004 0 351 59 8 0 0 0 0.00080716 1 14997 75.968 68.689 3 0.99844 0.77346 0 41344000 20463000 20882000 4150 178 2118 2354 6828 6828 40 277 NKLEDELK 8 2 0 Unmodified _NKLEDELK_ 0 0 0 1 Q8WYP5;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 494.7696 2 494.769114 987.523675 90393.51 0.4335 0.00021448 0.071512 3.5382E-05 0.50502 0.00024987 494.76904649752 502.783331447184 29.947 0.71102 29.947 29.615 30.326 0 151 49 4 0 0 0 0.03446 1 15560 58.433 10.859 1 2.0063 1.719 0 4607400 1971100 2636300 4151 1170 2119 2355 6829 6829 NKPHTPFR 8 1 1 Unmodified _NKPHTPFR_ 0 0 0 1 B4DM85;O00139;B0AZS5 B4DM85 B4DM85 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 332.8513 3 332.850643 995.530098 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.5 1 100.5 100 101 0 0 0 0 0.025357 1 57564 30.254 19.497 1 4152 640 2120 2356 6830 6830 NKPHTPFR 8 1 1 Unmodified _NKPHTPFR_ 0 0 0 1 B4DM85;O00139;B0AZS5 B4DM85 B4DM85 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 332.8583 3 332.850643 995.530098 NaN NaN NaN NaN NaN NaN NaN NaN NaN 101.32 1 101.32 100.82 101.82 0 0 0 0 0.0079618 1 58233 43.769 33.012 1 4153 640 2120 2356 6831 6831 NKPHTPFR 8 1 1 Unmodified _NKPHTPFR_ 0 0 0 1 B4DM85;O00139;B0AZS5 B4DM85 B4DM85 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 338.8581 3 332.850643 995.530098 NaN NaN NaN NaN NaN NaN NaN NaN NaN 102.72 1 102.72 102.22 103.22 7.6294E-06 0 0 0 0.014916 1 59233 41.029 29.661 1 4154 640 2120 2356 6832 6832 NKPHTPFR 8 1 1 Unmodified _NKPHTPFR_ 0 0 0 1 B4DM85;O00139;B0AZS5 B4DM85 B4DM85 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 338.8585 3 332.850643 995.530098 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.57 1 103.57 103.07 104.07 0 0 0 0 0.018973 1 59847 37.727 26.216 1 4155 640 2120 2356 6833 6833 NKPLSPIK 8 2 0 Phospho (STY) _NKPLS(ph)PIK_ NKPLS(1)PIK NKPLS(49.16)PIK 0 0 1 1 P35251;D6RAD2;Q14756 P35251 P35251 RFC1;LLDBP Replication factor C subunit 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 496.7793 2 488.764993 975.515433 87150.1 0.28154 0.00013761 0.31398 0.00015346 0.59552 0.00029107 488.765066117129 496.779288451863 64.812 0.58967 64.812 64.462 65.052 7.6294E-06 165 43 5 0 0 0 0.017487 1 30846 49.16 24.528 1 0.34262 0.42889 0 44525000 29876000 14650000 4156 986 2121 2357 6834 6834 1747 NKPLSPIK 8 2 0 Phospho (STY) _NKPLS(ph)PIK_ NKPLS(1)PIK NKPLS(85.62)PIK 0 0 1 1 P35251;D6RAD2;Q14756 P35251 P35251 RFC1;LLDBP Replication factor C subunit 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 488.7649 2 488.764993 975.515433 NaN NaN NaN -0.09626 -4.7048E-05 NaN NaN NaN NaN 64.303 0.48585 64.303 64.023 64.509 0 0 0 0 0.00027762 1 30576 85.622 53.152 1 NaN NaN 0 27171000 27171000 0 4157 986 2121 2357 6835 6835 1747 NKPLSPIK 8 2 0 Phospho (STY) _NKPLS(ph)PIK_ NKPLS(1)PIK NKPLS(76.94)PIK 0 0 1 1 P35251;D6RAD2;Q14756 P35251 P35251 RFC1;LLDBP Replication factor C subunit 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 496.7795 2 488.764993 975.515433 86400.56 0.51269 0.00025058 -0.064845 -3.1694E-05 0.44784 0.00021889 488.764891987731 496.779134303265 30.38 0.91007 30.38 30.058 30.968 0 332 67 8 0 0 0 0.004732 2 15745 76.943 48.836 1 0.61843 0.46259 0 100530000 61841000 38694000 4158 986 2121 2357 6836;6837 6836 1747 NKPNMSDPEESRGNDELVK 19 2 1 Oxidation (M),Phospho (STY) _NKPNM(ox)S(ph)DPEESRGNDELVK_ NKPNM(1)SDPEESRGNDELVK NKPNMS(0.926)DPEES(0.074)RGNDELVK NKPNM(43.35)SDPEESRGNDELVK NKPNMS(10.98)DPEES(-10.98)RGNDELVK 0 1 1 2 Q15021;B4E0B7;B3KMS0;B3KY03;E7EN77;Q6ZV00 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 752.6594 3 752.326378 2253.95731 69317.99 0.77805 0.00058535 -0.4716 -0.0003548 0.30646 0.00023056 752.660383241763 761.005116872379 65.358 0.44153 65.358 65.149 65.591 7.6294E-06 194 32 9 0 0 0 7.2898E-05 1 31397 43.349 32.881 2 1.1152 1.314 0 103390000 50334000 53053000 4159 1067 2122 2358 6838 6838 307 2008 NKYEDEINK 9 2 0 Unmodified _NKYEDEINK_ 0 0 0 1 CON__P05787;P05787;Q969I0;F8VUG2;CON__H-INV:HIT000292931;CON__H-INV:HIT000016045;F8VP67;F8W0C6;CON__Q6IFZ6;CON__Q9H552;F8W1U3;H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRG2;B4DL32;CON__Q8VED5;B4E1T1;CON__P13647;P13647;CON__Q5XKE5;Q5XKE5 CON__P05787;F8W1U3;H6VRG3;H6VRG2 H6VRG2 KRT8;KRT5;KRT1;KRT79 Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 79 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 576.7802 2 576.78021 1151.54587 78395.41 0.52537 0.00030303 -0.12961 -7.4756E-05 0.39576 0.00022827 576.780089398642 584.794247095967 70.608 3.0544 70.608 69.383 72.437 0 1028 289 5 0 0 0 2.8557E-152 7 35580 237.65 176.75 1 0.45649 0.58811 0 123740000 75894000 47850000 + 4160 876;877;754;832 2123 2359 6839;6840;6841;6842;6843;6844;6845 6843 NKYEDEINK 9 2 0 Unmodified _NKYEDEINK_ 0 0 0 1 CON__P05787;P05787;Q969I0;F8VUG2;CON__H-INV:HIT000292931;CON__H-INV:HIT000016045;F8VP67;F8W0C6;CON__Q6IFZ6;CON__Q9H552;F8W1U3;H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRG2;B4DL32;CON__Q8VED5;B4E1T1;CON__P13647;P13647;CON__Q5XKE5;Q5XKE5 CON__P05787;F8W1U3;H6VRG3;H6VRG2 H6VRG2 KRT8;KRT5;KRT1;KRT79 Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 79 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 576.78 2 576.78021 1151.54587 79878.52 0.33818 0.00019505 0.0012196 7.0343E-07 0.3394 0.00019576 576.780252222872 584.794338908403 19.424 0.22137 19.424 19.312 19.534 0 47 10 5 0 0 0 8.9061E-14 1 6418 144.66 101.21 1 0.32837 0.26816 0 23720000 16874000 6846100 + 4161 876;877;754;832 2123 2359 6846 6846 NKYEDEINKR 10 2 1 Unmodified _NKYEDEINKR_ 0 0 0 2 CON__P05787;P05787;Q969I0;F8VUG2;CON__H-INV:HIT000016045;F8VP67;F8W0C6;CON__Q6IFZ6;F8W1U3;H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRG2;B4DL32;CON__Q8VED5;B4E1T1;CON__P13647;P13647 CON__P05787;F8W1U3;H6VRG3;H6VRG2 H6VRG2 KRT8;KRT5;KRT1 Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 437.224 3 436.889603 1307.64698 91216.48 -0.082326 -3.5967E-05 -0.17735 -7.7483E-05 -0.25968 -0.00011345 436.889556081327 445.568399633253 82.759 1.9068 82.759 82.546 84.453 0 416 174 7 0 0 0 3.587E-07 4 44149 118.28 118.28 1 0.035955 0.042497 0 188200000 180400000 7808000 + 4162 876;877;754;832 2124 2360 6847;6848;6849;6850 6847 NKYEDEINKR 10 2 1 Unmodified _NKYEDEINKR_ 0 0 0 2 CON__P05787;P05787;Q969I0;F8VUG2;CON__H-INV:HIT000016045;F8VP67;F8W0C6;CON__Q6IFZ6;F8W1U3;H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRG2;B4DL32;CON__Q8VED5;B4E1T1;CON__P13647;P13647 CON__P05787;F8W1U3;H6VRG3;H6VRG2 H6VRG2 KRT8;KRT5;KRT1 Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 5 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 436.8894 3 436.889603 1307.64698 NaN NaN NaN 0.0012137 5.3024E-07 NaN NaN NaN NaN 84.617 0.62992 84.617 84.453 85.083 0 0 0 0 0.009867 1 45797 64.064 55.551 1 NaN NaN 0 11038000 11038000 0 + 4163 876;877;754;832 2124 2360 6851 6851 NKYEDEINKR 10 2 1 Unmodified _NKYEDEINKR_ 0 0 0 2 CON__P05787;P05787;Q969I0;F8VUG2;CON__H-INV:HIT000016045;F8VP67;F8W0C6;CON__Q6IFZ6;F8W1U3;H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRG2;B4DL32;CON__Q8VED5;B4E1T1;CON__P13647;P13647 CON__P05787;F8W1U3;H6VRG3;H6VRG2 H6VRG2 KRT8;KRT5;KRT1 Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 5 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 436.8898 3 436.889603 1307.64698 91336.68 0.08177 3.5724E-05 -0.096561 -4.2186E-05 -0.014791 -6.4621E-06 436.889521839841 445.56845866205 17.978 0.30688 17.978 17.849 18.156 0 48 12 7 0 0 0 5.1027E-08 1 5124 124.67 118.09 1 0.10079 0.083126 0 50187000 44837000 5349600 + 4164 876;877;754;832 2124 2360 6852 6852 NLAANDLSPSR 11 0 1 Phospho (STY) _NLAANDLS(ph)PSR_ NLAANDLS(0.798)PS(0.202)R NLAANDLS(5.97)PS(-5.97)R 0 0 1 0 B3KUM0;A8K8I8;Q96CB9 B3KUM0 B3KUM0 NSUN4 5-methylcytosine rRNA methyltransferase NSUN4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 619.2831 2 619.282267 1236.54998 78642.83 0.6112 0.0003785 0.054178 3.3551E-05 0.66537 0.00041205 619.282168965958 624.286316364064 58.791 0.84799 58.791 58.179 59.027 0 184 68 4 0 0 0 0.0098833 1 26037 53.034 32.705 2 0.83894 0.91887 0 6559400 2863300 3696100 4165 493 2125 2361 6853 6853 847;848 NLAANDLSPSR 11 0 1 Phospho (STY) _NLAANDLSPS(ph)R_ NLAANDLS(0.424)PS(0.576)R NLAANDLS(-1.33)PS(1.33)R 0 0 1 0 B3KUM0;A8K8I8;Q96CB9 B3KUM0 B3KUM0 NSUN4 5-methylcytosine rRNA methyltransferase NSUN4 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 619.283 2 619.282267 1236.54998 NaN NaN NaN 0.082257 5.094E-05 NaN NaN NaN NaN 51.103 0.72461 51.103 50.779 51.504 -3.8147E-06 0 0 0 0.017542 1 30887 45.79 21.447 2 NaN NaN 0 3418000 3418000 0 4166 493 2125 2361 6854 6854 847;848 NLALSCPSMTKSLK 14 2 0 Oxidation (M),2 Phospho (STY) _NLALSCPS(ph)M(ox)T(ph)KSLK_ NLALSCPSM(1)TKSLK NLALS(0.418)CPS(0.551)MT(0.56)KS(0.47)LK NLALSCPSM(45.79)TKSLK NLALS(-0.67)CPS(0)MT(0.67)KS(0)LK 0 1 2 1 B4DMR4 B4DMR4 B4DMR4 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 863.3726 2 863.371256 1724.72796 NaN NaN NaN 0.57101 0.00049299 NaN NaN NaN NaN 62.147 1.3292 62.147 61.487 62.816 3.8147E-06 0 0 0 0.0012755 1 29052 45.79 13.166 6 NaN NaN 0 10136000 10136000 0 4167 642 2126 2362 6855 6855 162 1059;1060;2787 NLDIERPTYTNLNR 14 0 2 Unmodified _NLDIERPTYTNLNR_ 0 0 0 1 B3KT06;B3KPS3;Q53GA7;A8JZY9;F5H5D3;B7Z1K5;Q9BQE3;Q71U36;P68363;F8VQQ4;F8VVB9;Q1ZYQ1;Q13748;B4DDU2;Q9UQM3;B4DQK4;C9J2C0;Q9NY65;Q6PEY2;C9JDS9;Q7Z3M3;P68366 B3KT06;P68366 B3KT06 TUBA1C;TUBA1A;TUBA1B;TUBA2;TUBA3C;TUBA8;TUBA3E;TUBA4A;DKFZp686L04275 Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3C/D chain;Tubulin alpha-8 chain;Tubulin alpha-3E chain;Tubulin alpha-4A chain MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 573.6331 3 573.632192 1717.87475 79434.47 0.84409 0.0004842 0.1864 0.00010692 1.0305 0.00059112 573.632413509022 580.304409221762 97.601 1.793 97.601 96.665 98.458 -7.6294E-06 786 150 8 0 0 0 0.000227 3 54981 77.776 77.776 1 1.385 1.7311 0 268290000 104630000 163660000 4168 437;1024 2127 2363 6856;6857;6858 6856 NLDLDSIIAEVK 12 1 0 Unmodified _NLDLDSIIAEVK_ 0 0 0 0 H6VRG2;B4DL32;CON__Q8VED5;B4E1T1;CON__P13647;P13647;CON__Q5XKE5;Q5XKE5;CON__P35908;P35908 H6VRG2;CON__P35908 H6VRG2 KRT1;KRT5;KRT79;KRT2 Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 79;Keratin, type II cytoskeletal 2 epidermal MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 665.3663 2 665.36665 1328.71875 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.63 1 131.63 131.13 132.13 0 0 0 0 0.0079232 1 80078 46.706 25.804 1 + 4169 877;758 2128 2364 6859 6859 NLDLDSIIAEVK 12 1 0 Unmodified _NLDLDSIIAEVK_ 0 0 0 0 H6VRG2;B4DL32;CON__Q8VED5;B4E1T1;CON__P13647;P13647;CON__Q5XKE5;Q5XKE5;CON__P35908;P35908 H6VRG2;CON__P35908 H6VRG2 KRT1;KRT5;KRT79;KRT2 Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 79;Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 665.8674 2 665.36665 1328.71875 NaN NaN NaN -0.076319 -5.078E-05 NaN NaN NaN NaN 134.64 0.14767 134.64 134.56 134.71 0 0 0 0 0.00033255 1 86922 84.687 51.137 1 NaN NaN 0 5733100 5733100 0 + 4170 877;758 2128 2364 6860 6860 NLEEAELHSTEK 12 1 0 Phospho (STY) _NLEEAELHS(ph)TEK_ NLEEAELHS(0.5)T(0.5)EK NLEEAELHS(0)T(0)EK 0 0 1 0 H0YLV8;Q3B7X0;H0YNU5;B2RAN0;P54132 H0YLV8 H0YLV8 BLM Bloom syndrome protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 740.322 2 740.321786 1478.62902 69583.02 0.85447 0.00063259 -0.22747 -0.0001684 0.627 0.00046418 740.321662901217 744.328554921616 61.601 1.2865 61.601 60.965 62.251 -3.8147E-06 528 90 8 0 0 0 9.8959E-17 5 28047 128.22 88.306 2 0.66284 0.82198 0 119840000 78807000 41038000 4171 549 2129 2365 6861;6862;6863;6864;6865 6861 907;2763 NLEEAELHSTEK 12 1 0 Phospho (STY) _NLEEAELHS(ph)TEK_ NLEEAELHS(0.5)T(0.5)EK NLEEAELHS(0)T(0)EK 0 0 1 0 H0YLV8;Q3B7X0;H0YNU5;B2RAN0;P54132 H0YLV8 H0YLV8 BLM Bloom syndrome protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 740.3224 2 740.321786 1478.62902 70332.46 0.96077 0.00071128 -0.11348 -8.4009E-05 0.84729 0.00062727 740.321771294147 744.328901790261 36.016 1.1171 36.016 35.66 36.777 0 465 93 8 0 0 0 0.0015995 2 20166 74.649 43.052 2 1.2785 0.85307 0 111160000 50119000 61043000 4172 549 2129 2365 6866;6867 6867 907;2763 NLEETSPVTQAER 13 0 1 Phospho (STY) _NLEETS(ph)PVTQAER_ NLEET(0.034)S(0.932)PVT(0.034)QAER NLEET(-14.36)S(14.36)PVT(-14.36)QAER 0 0 1 0 Q9Y5A5;B3KN61;A0A024R3M3;O95125 Q9Y5A5 Q9Y5A5 ZNF202 Zinc finger protein 202 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 777.3467 2 777.345792 1552.67703 66965.2 0.68741 0.00053435 -0.51104 -0.00039725 0.17637 0.0001371 777.344413034506 782.349781672464 58.961 1.2113 58.961 58.478 59.689 3.8147E-06 302 98 6 0 0 0 1.0047E-09 1 26080 101.3 81 3 1.1147 1.3426 0 18550000 8491800 10058000 4173 77 2130 2366 6868 6868 101 NLEETSPVTQAER 13 0 1 Phospho (STY) _NLEETS(ph)PVTQAER_ NLEET(0.068)S(0.863)PVT(0.068)QAER NLEET(-11.01)S(11.01)PVT(-11.01)QAER 0 0 1 0 Q9Y5A5;B3KN61;A0A024R3M3;O95125 Q9Y5A5 Q9Y5A5 ZNF202 Zinc finger protein 202 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 777.3474 2 777.345792 1552.67703 66863.56 1.1421 0.00088779 1.0472 0.00081406 2.1893 0.0017018 777.34570320934 782.350433747097 54.845 1.0961 54.845 54.282 55.378 0 428 96 8 0 0 0 0.00050839 2 33427 77.068 55.013 3 2.0775 1.5376 0 23042000 7357300 15685000 4174 77 2130 2366 6869;6870 6870 101 NLEQILNGGESPK 13 1 0 Phospho (STY) _NLEQILNGGES(ph)PK_ NLEQILNGGES(1)PK NLEQILNGGES(57.41)PK 0 0 1 0 G3V3G7;G3V340;A0AV58;Q13033 G3V3G7 G3V3G7 STRN3 Striatin-3 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 743.8582 2 739.847971 1477.68139 NaN NaN NaN 1.2311 0.00091084 NaN NaN NaN NaN 103.04 0.12699 103.04 102.97 103.1 0 0 0 0 0.0012065 1 59478 57.414 12.253 1 NaN NaN 0 3259800 0 3259800 4175 393 2131 2367 6871 6871 672 NLGSPTQVISK 11 1 0 Phospho (STY) _NLGS(ph)PTQVISK_ NLGS(0.847)PT(0.153)QVISK NLGS(7.44)PT(-7.44)QVIS(-40.51)K 0 0 1 0 Q86TZ8;B4DFJ1;Q9BSI4 Q86TZ8 Q86TZ8 TINF2 TERF1-interacting nuclear factor 2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 612.3063 2 612.30521 1222.59587 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.232 1 77.232 76.732 77.732 7.6294E-06 0 0 0 0.001676 1 40219 62.14 31.57 3 4176 620 2132 2368 6872 6872 1026 NLGSPTQVISKPESK 15 2 0 Phospho (STY) _NLGS(ph)PTQVISKPESK_ NLGS(0.999)PT(0.001)QVISKPESK NLGS(28.88)PT(-28.88)QVIS(-88.52)KPES(-119.58)K 0 0 1 1 Q86TZ8;B4DFJ1;Q9BSI4 Q86TZ8 Q86TZ8 TINF2 TERF1-interacting nuclear factor 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 832.917 2 832.916385 1663.81822 67367.55 0.87606 0.00072968 0.019661 1.6376E-05 0.89572 0.00074606 832.916369162129 840.930546033165 76.152 1.0343 76.152 75.681 76.715 0 518 90 7 0 0 0 8.1801E-34 4 39636 140.89 140.89 4 0.82321 1.0502 0 87359000 47637000 39721000 4177 620 2133 2369 6873;6874;6875;6876 6874 1026 NLGSPTQVISKPESK 15 2 0 Phospho (STY) _NLGS(ph)PTQVISKPESK_ NLGS(0.915)PT(0.085)QVISKPESK NLGS(10.32)PT(-10.32)QVIS(-36.48)KPES(-49.83)K 0 0 1 1 Q86TZ8;B4DFJ1;Q9BSI4 Q86TZ8 Q86TZ8 TINF2 TERF1-interacting nuclear factor 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 555.9484 3 555.613349 1663.81822 81244.43 0.76454 0.00042479 -0.24632 -0.00013686 0.51822 0.00028793 555.613146693856 560.955892267235 76.193 0.99723 76.193 75.707 76.704 0 389 87 7 0 0 0 0.00039583 1 39165 61.276 61.276 4 0.81127 1.0287 0 70288000 33155000 37133000 4178 620 2133 2369 6877 6877 1026 NLGSPTQVISKPESK 15 2 0 Phospho (STY) _NLGS(ph)PTQVISKPESK_ NLGS(0.906)PT(0.094)QVISKPESK NLGS(9.83)PT(-9.83)QVIS(-47.41)KPES(-59.58)K 0 0 1 1 Q86TZ8;B4DFJ1;Q9BSI4 Q86TZ8 Q86TZ8 TINF2 TERF1-interacting nuclear factor 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 833.4188 2 832.916385 1663.81822 65545.9 1.1161 0.00092959 -0.68596 -0.00057135 0.4301 0.00035824 832.914948564781 840.930464955779 68.461 2.0463 68.461 67.828 69.874 0 1225 179 10 0 0 0 3.5261E-05 2 42707 77.13 77.13 4 1.5502 1.1501 0 186310000 64676000 121630000 4179 620 2133 2369 6878;6879 6878 1026 NLGSPTQVISKPESK 15 2 0 Phospho (STY) _NLGS(ph)PTQVISKPESK_ NLGS(0.832)PT(0.168)QVISKPESK NLGS(6.94)PT(-6.94)QVIS(-44.95)KPES(-56.26)K 0 0 1 1 Q86TZ8;B4DFJ1;Q9BSI4 Q86TZ8 Q86TZ8 TINF2 TERF1-interacting nuclear factor 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 560.9559 3 555.613349 1663.81822 80873.06 0.86534 0.0004808 -0.23902 -0.0001328 0.62632 0.00034799 555.613294334375 560.956009077977 68.431 1.7308 68.431 67.866 69.596 0 857 151 9 0 0 0 1.8635E-05 3 43356 76.704 76.704 4 1.7987 1.3469 0 92975000 30427000 62547000 4180 620 2133 2369 6880;6881;6882 6882 1026 NLLSDCSVVSTSLEDK 16 1 0 Phospho (STY) _NLLSDCSVVSTS(ph)LEDK_ NLLSDCSVVS(0.001)T(0.064)S(0.935)LEDK NLLS(-166.64)DCS(-73.63)VVS(-29.54)T(-11.61)S(11.61)LEDK 0 0 1 0 O95235;D6R9E4;D6RBN1 O95235 O95235 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 927.9186 2 923.910639 1845.80672 62219.74 0.72906 0.00067359 0.069716 6.4412E-05 0.79878 0.000738 923.910886987191 927.917841479403 106.17 1.0027 106.17 105.7 106.71 0 441 68 10 0 0 0 8.6028E-196 3 61572 239.93 215.95 5 0.44861 0.55656 0 113250000 76987000 36264000 4181 943 2134 2370 6883;6884;6885 6884 1622;1623 NLLSDCSVVSTSLEDK 16 1 0 Phospho (STY) _NLLS(ph)DCSVVSTSLEDK_ NLLS(0.844)DCS(0.154)VVST(0.001)SLEDK NLLS(7.38)DCS(-7.38)VVS(-33.15)T(-31.94)S(-40.18)LEDK 0 0 1 0 O95235;D6R9E4;D6RBN1 O95235 O95235 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 923.91 2 923.910639 1845.80672 NaN NaN NaN -1.2251 -0.0011319 NaN NaN NaN NaN 115.48 0.40414 115.48 115.29 115.7 0 0 0 0 2.3731E-10 1 68905 87.148 70.516 5 NaN NaN 0 6077900 6077900 0 4182 943 2134 2370 6886 6886 1622;1623 NLLSDCSVVSTSLEDK 16 1 0 Phospho (STY) _NLLS(ph)DCSVVSTSLEDK_ NLLS(0.992)DCS(0.008)VVSTSLEDK NLLS(20.89)DCS(-20.89)VVS(-37.92)T(-42.04)S(-41.35)LEDK 0 0 1 0 O95235;D6R9E4;D6RBN1 O95235 O95235 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 927.9186 2 923.910639 1845.80672 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.45 1 115.45 114.95 115.95 0 0 0 0 3.7685E-06 1 68881 65.179 40.621 5 4183 943 2134 2370 6887 6887 1622;1623 NLLSDCSVVSTSLEDK 16 1 0 Phospho (STY) _NLLSDCSVVSTS(ph)LEDK_ NLLSDCSVVS(0.003)T(0.183)S(0.813)LEDK NLLS(-77.04)DCS(-60.11)VVS(-23.91)T(-6.47)S(6.47)LEDK 0 0 1 0 O95235;D6R9E4;D6RBN1 O95235 O95235 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 923.912 2 923.910639 1845.80672 62636.65 1.0888 0.001006 0.4565 0.00042176 1.5453 0.0014277 924.41294087206 927.918175672497 112.89 2.2281 112.89 112.29 114.52 7.6294E-06 960 211 8 0 0 0 5.4547E-30 2 72560 124.68 108.42 5 0.80623 0.53814 0 376440000 212550000 163880000 4184 943 2134 2370 6888;6889 6888 1622;1623 NLLSDCSVVSTSLEDK 16 1 0 Phospho (STY) _NLLS(ph)DCSVVSTSLEDK_ NLLS(0.904)DCS(0.084)VVS(0.008)T(0.003)S(0.001)LEDK NLLS(10.33)DCS(-10.33)VVS(-20.47)T(-24.46)S(-27.93)LEDK 0 0 1 0 O95235;D6R9E4;D6RBN1 O95235 O95235 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 927.9189 2 923.910639 1845.80672 66196.77 1.0028 0.00092646 0.034967 3.2307E-05 1.0377 0.00095877 923.910665703527 927.918278153152 123.47 0.55951 123.47 123.23 123.79 0 285 54 8 0 0 0 0.0011355 1 79786 41.482 31.143 5 1.3697 1.0001 0 20152000 7595500 12556000 4185 943 2134 2370 6890 6890 1622;1623 NLPLADQGSSHHITVK 16 1 0 Unmodified _NLPLADQGSSHHITVK_ 0 0 0 0 P15924;B4DKX6;B4E2A0;Q4LE79;B4DWT7 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 572.973 3 572.972437 1715.89548 81789.84 0.62443 0.00035778 0.071024 4.0695E-05 0.69546 0.00039848 572.972612034213 575.643773763573 107.68 0.42609 107.68 107.52 107.94 0 135 30 7 0 0 0 0.00013024 2 62841 47.568 39.976 1 0.54525 0.68409 0 27778000 16770000 11008000 4186 965 2135 2371 6891;6892 6891 NLQDPVPKESPK 12 2 0 Phospho (STY) _NLQDPVPKES(ph)PK_ NLQDPVPKES(1)PK NLQDPVPKES(110.15)PK 0 0 1 1 A0A087X0P0;Q02224 A0A087X0P0 A0A087X0P0 CENPE Kinesin-like protein;Centromere-associated protein E MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 724.362 2 716.347607 1430.68066 71659.11 0.75729 0.00054248 -0.069485 -4.9776E-05 0.6878 0.00049271 716.34714819942 724.361860783352 63.252 0.66856 63.252 62.984 63.653 0 229 56 5 0 0 0 2.7763E-11 1 29684 110.15 94.999 1 1.5495 1.9524 0 56096000 18646000 37450000 4187 269 2136 2372 6893 6893 428 NLSELQDTSLQQLVSQR 17 0 1 Phospho (STY) _NLSELQDTS(ph)LQQLVSQR_ NLSELQDT(0.167)S(0.833)LQQLVSQR NLS(-64.87)ELQDT(-6.99)S(6.99)LQQLVS(-34.21)QR 0 0 1 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1019.9961 2 1019.99388 2037.97321 60645.75 0.40307 0.00041113 1.3113 0.0013375 1.7144 0.0017486 1020.49580779351 1025.00080332702 116.3 1.0425 116.3 115.95 116.99 0 416 92 7 0 0 0 6.109E-18 1 69295 110.12 110.12 4 0.94517 1.1914 0 60620000 30291000 30329000 4188 1097 2137 2373 6894 6894 2070 NLSESPVITK 10 1 0 Phospho (STY) _NLSES(ph)PVITK_ NLSES(0.997)PVIT(0.003)K NLS(-46.98)ES(24.6)PVIT(-24.6)K 0 0 1 0 E7ETD6;Q12830;F5GXF5 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 584.2866 2 584.286486 1166.55842 79284.22 0.57093 0.00033359 0.14898 8.7048E-05 0.71992 0.00042064 584.286568442263 588.293487584236 66.097 1.6981 66.097 65.404 67.102 0 641 125 8 0 0 0 4.4052E-06 4 32221 107.52 67.477 3 0.64245 0.79506 0 233910000 138360000 95550000 4189 791 2138 2374 6895;6896;6897;6898 6897 1338 NLSESPVITK 10 1 0 Phospho (STY) _NLSES(ph)PVITK_ NLS(0.001)ES(0.958)PVIT(0.041)K NLS(-28.68)ES(13.69)PVIT(-13.69)K 0 0 1 0 E7ETD6;Q12830;F5GXF5 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 588.294 2 584.286486 1166.55842 78361.78 0.79222 0.00046288 -0.03704 -2.1642E-05 0.75518 0.00044124 584.28656054087 588.293516692617 60.948 2.8796 60.948 60.042 62.922 3.8147E-06 1392 268 10 0 0 0 0.0079615 4 37744 59.57 37.577 3 1.9179 1.2809 0 260650000 91583000 169070000 4190 791 2138 2374 6899;6900;6901;6902 6900 1338 NLSFNELYPSGTLK 14 1 0 Phospho (STY) _NLS(ph)FNELYPSGTLK_ NLS(1)FNELYPSGTLK NLS(122.58)FNELY(-122.58)PS(-128.36)GT(-132.82)LK 0 0 1 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 835.9001 2 831.892378 1661.7702 66422.19 0.7823 0.00065079 0.098979 8.234E-05 0.88128 0.00073313 831.892590671584 835.899541869121 120.79 1.168 120.79 120.38 121.55 -7.6294E-06 689 95 12 0 0 0 1.5535E-50 4 73148 157.35 145.98 4 0.78515 0.96959 0 617620000 352760000 264850000 4191 1170 2139 2375 6903;6904;6905;6906 6905 2294;2295 NLSFNELYPSGTLK 14 1 0 Phospho (STY) _NLS(ph)FNELYPSGTLK_ NLS(1)FNELYPSGTLK NLS(76.45)FNELY(-76.45)PS(-86.38)GT(-90.16)LK 0 0 1 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 832.3961 2 831.892378 1661.7702 NaN NaN NaN 0.44414 0.00036947 NaN NaN NaN NaN 121.44 0.30484 121.44 121.42 121.72 0 0 0 0 7.9473E-18 1 73318 107.74 80.637 4 NaN NaN 0 4809700 4809700 0 4192 1170 2139 2375 6907 6907 2294;2295 NLSFNELYPSGTLK 14 1 0 Phospho (STY) _NLS(ph)FNELYPSGTLK_ NLS(1)FNELYPSGTLK NLS(85.13)FNELY(-85.13)PS(-99.8)GT(-100.45)LK 0 0 1 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 832.3954 2 831.892378 1661.7702 66714.79 0.9863 0.0008205 0.079617 6.6233E-05 1.0659 0.00088673 831.892935534513 835.899601432936 129.45 2.3292 129.45 128.87 131.2 0 1425 218 13 0 0 0 3.5294E-18 4 83833 118.19 118.19 4 1.8608 1.2404 0 820810000 289120000 531690000 4193 1170 2139 2375 6908;6909;6910;6911 6909 2294;2295 NLSFNELYPSGTLK 14 1 0 2 Phospho (STY) _NLS(ph)FNELYPS(ph)GTLK_ NLS(1)FNELYPS(0.606)GT(0.394)LK NLS(52.36)FNELY(-40.15)PS(1.86)GT(-1.86)LK 0 0 2 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 875.8841 2 871.875543 1741.73653 67198.96 0.93213 0.0008127 0.11305 9.8561E-05 1.0452 0.00091126 871.875426599279 875.882718202594 126.96 0.63696 126.96 126.65 127.29 0 261 58 6 0 0 0 0.0014809 1 77084 65.477 65.477 6 0.73957 0.88068 0 12148000 5787000 6360600 4194 1170 2139 2376 6912 6912 2294;2295 NLSLSIDER 9 0 1 Phospho (STY) _NLSLS(ph)IDER_ NLS(0.006)LS(0.994)IDER NLS(-22.23)LS(22.23)IDER 0 0 1 0 B9ZVT1;Q8IXT5 B9ZVT1 B9ZVT1 RBM12B RNA-binding protein 12B ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 563.7609 2 563.760636 1125.50672 NaN NaN NaN 0.058391 3.2918E-05 NaN NaN NaN NaN 93.894 0.22101 93.894 93.814 94.035 7.6294E-06 0 0 0 0.010398 1 60522 55.314 12.978 2 NaN NaN 0 2076700 2076700 0 4195 733 2140 2377 6913 6913 1231 NLSPGAVESDVR 12 0 1 Phospho (STY) _NLS(ph)PGAVESDVR_ NLS(1)PGAVESDVR NLS(90.77)PGAVES(-90.77)DVR 0 0 1 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 662.3018 2 662.300656 1322.58676 74366.77 0.62543 0.00041422 0.11511 7.6236E-05 0.74054 0.00049046 662.30098899191 667.304739232686 84.399 1.6612 84.399 83.595 85.256 0 956 154 8 0 0 0 9.645E-26 3 45454 145.81 111.6 2 1.086 1.375 0 470320000 217640000 252680000 4196 1006 2141 2378 6914;6915;6916 6916 1835 NLSPGAVESDVR 12 0 1 Phospho (STY) _NLS(ph)PGAVESDVR_ NLS(1)PGAVESDVR NLS(108.03)PGAVES(-108.03)DVR 0 0 1 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 667.3058 2 662.300656 1322.58676 74066.43 1.1501 0.00076174 0.10964 7.2616E-05 1.2598 0.00083436 662.300836998505 667.304823971329 88.003 1.6508 88.003 87.386 89.036 0 934 159 8 0 0 0 5.7787E-53 3 56810 171.21 149.45 2 0.79191 0.52444 0 209360000 115670000 93688000 4197 1006 2141 2378 6917;6918;6919 6918 1835 NLSPGAVESDVR 12 0 1 Phospho (STY) _NLS(ph)PGAVESDVR_ NLS(0.999)PGAVES(0.001)DVR NLS(30.36)PGAVES(-30.36)DVR 0 0 1 0 P53621 P53621 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 662.3011 2 662.300656 1322.58676 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.091 1 89.091 88.591 89.591 0 0 0 0 0.013543 1 57366 41.621 30.131 2 4198 1006 2141 2378 6920 6920 1835 NLSPSFSR 8 0 1 Phospho (STY) _NLS(ph)PSFSR_ NLS(1)PSFSR NLS(45.13)PS(-45.13)FS(-57.49)R 0 0 1 0 Q1ED39;H3BNU8 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 499.2228 2 494.218407 986.422261 86368.84 0.24675 0.00012195 0.086711 4.2854E-05 0.33346 0.0001648 494.218422559345 499.222462781121 66.239 1.4754 66.239 65.545 67.021 0 576 109 8 0 0 0 0.0047013 2 32548 114.4 30.403 3 0.9064 1.1461 0 225850000 119310000 106540000 4199 1082 2142 2379 6921;6922 6922 2037 NLSPSFSR 8 0 1 Phospho (STY) _NLS(ph)PSFSR_ NLS(0.999)PS(0.001)FSR NLS(31.98)PS(-31.98)FS(-38.16)R 0 0 1 0 Q1ED39;H3BNU8 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 499.2227 2 494.218407 986.422261 85811.88 0.57028 0.00028184 -0.23542 -0.00011635 0.33486 0.00016549 494.218362366551 499.222375828384 60.09 2.9996 60.09 59.174 62.173 0 1354 281 9 0 0 0 0.0058927 5 37732 82.261 9.6537 3 2.0619 1.3481 0 395660000 130880000 264780000 4200 1082 2142 2379 6923;6924;6925;6926;6927 6926 2037 NMGLSPPASSTSTSSTCR 18 0 1 Oxidation (M),Phospho (STY) _NM(ox)GLS(ph)PPASSTSTSSTCR_ NM(1)GLSPPASSTSTSSTCR NMGLS(1)PPASSTSTSSTCR NM(84.83)GLSPPASSTSTSSTCR NMGLS(49.19)PPAS(-49.19)S(-55.14)T(-60.79)S(-60.04)T(-65.44)S(-70.25)S(-74.21)T(-74.21)CR 0 1 1 0 Q9HC52;C9JM54;C9J6K3 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 968.8928 2 968.892455 1935.77036 60975.88 0.30509 0.0002956 -0.29034 -0.0002813 0.014749 1.429E-05 968.892259810069 973.896898477201 53.256 1.5819 53.256 52.327 53.908 0 741 129 8 0 0 0 1.5891E-10 3 22354 84.829 77.695 9 0.97766 1.23 0 46347000 22279000 24068000 4201 1210 2143 2380 6928;6929;6930 6929 338 2413 NMQDMVEDYR 10 0 1 2 Oxidation (M) _NM(ox)QDM(ox)VEDYR_ NM(1)QDM(1)VEDYR NM(75.38)QDM(75.38)VEDYR 0 2 0 0 H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRG2 H6VRG3;H6VRG2 H6VRG2 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 666.7637 2 666.763377 1331.5122 NaN NaN NaN -0.32527 -0.00021688 NaN NaN NaN NaN 49.175 0.73258 49.175 48.913 49.646 0 0 0 0 0.00016886 1 19563 75.378 52.638 1 NaN NaN 0 2850300 2850300 0 + 4202 876;877 2144 2381 6931 6931 237;238 NMQDMVEDYR 10 0 1 2 Oxidation (M) _NM(ox)QDM(ox)VEDYR_ NM(1)QDM(1)VEDYR NM(43.28)QDM(43.28)VEDYR 0 2 0 0 H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRG2 H6VRG3;H6VRG2 H6VRG2 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 666.7648 2 666.763377 1331.5122 NaN NaN NaN -0.33345 -0.00022233 NaN NaN NaN NaN 25.687 0.3426 25.687 25.506 25.849 0 0 0 0 0.00892 1 11912 43.282 31.056 1 NaN NaN 0 1791700 1791700 0 + 4203 876;877 2144 2381 6932 6932 237;238 NMSVIAHVDHGK 12 1 0 Oxidation (M) _NM(ox)SVIAHVDHGK_ NM(1)SVIAHVDHGK NM(46.48)SVIAHVDHGK 0 1 0 0 P13639;Q6PK56;B4DPU3;B4DMC6;B4DRE8 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 444.5587 3 441.887316 1322.64012 90659.67 -0.19582 -8.6529E-05 0.12589 5.5629E-05 -0.069927 -3.09E-05 441.886741229446 444.558811322509 84.082 0.83792 84.082 83.343 84.181 0 146 81 4 0 0 0 0.0037397 1 44819 46.481 43.258 1 4.1381 5.2261 0 30946000 5166900 25779000 4204 964 2145 2382 6933 6933 271 NMSVIAHVDHGK 12 1 0 Oxidation (M) _NM(ox)SVIAHVDHGK_ NM(1)SVIAHVDHGK NM(62.92)SVIAHVDHGK 0 1 0 0 P13639;Q6PK56;B4DPU3;B4DMC6;B4DRE8 P13639 P13639 EEF2 Elongation factor 2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 444.5586 3 441.887316 1322.64012 NaN NaN NaN 0.56322 0.00024888 NaN NaN NaN NaN 84.3 0.28178 84.3 84.136 84.418 0 0 0 0 0.0010717 1 45334 62.924 48.048 1 NaN NaN 0 35431000 0 35431000 4205 964 2145 2382 6934 6934 271 NMSVIAHVDHGK 12 1 0 Oxidation (M) _NM(ox)SVIAHVDHGK_ NM(1)SVIAHVDHGK NM(56.2)SVIAHVDHGK 0 1 0 0 P13639;Q6PK56;B4DPU3;B4DMC6;B4DRE8 P13639 P13639 EEF2 Elongation factor 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 444.5583 3 441.887316 1322.64012 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.785 1 85.785 85.285 86.285 0 0 0 0 0.00031705 1 46374 56.205 45.595 1 4206 964 2145 2382 6935 6935 271 NNASTDYDLSDK 12 1 0 Unmodified _NNASTDYDLSDK_ 0 0 0 0 B3KS36;P39023;Q8TBW1;Q9NY85;G5E9G0;Q49AJ9;B5MCW2;Q9BT63 B3KS36 B3KS36 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 675.7994 2 671.791503 1341.56845 74287.09 0.6907 0.00046401 0.55332 0.00037172 1.244 0.00083572 671.791559626024 675.798990077755 55.871 1.3409 55.871 55.017 56.358 0 593 107 8 0 0 0 1.311E-15 3 23802 125.74 113.69 1 0.96425 1.2076 0 61026000 28013000 33013000 4207 597 2146 2383 6936;6937;6938 6937 NNASTDYDLSDK 12 1 0 Unmodified _NNASTDYDLSDK_ 0 0 0 0 B3KS36;P39023;Q8TBW1;Q9NY85;G5E9G0;Q49AJ9;B5MCW2;Q9BT63 B3KS36 B3KS36 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 675.7996 2 671.791503 1341.56845 74321.33 1.0382 0.00069744 0.4736 0.00031816 1.5118 0.0010156 671.791879250203 675.798912521898 32.33 0.65961 32.33 32.118 32.777 0 297 52 8 0 0 0 0.013038 2 17419 68.536 64.237 1 1.0906 0.72742 0 108630000 49865000 58761000 4208 597 2146 2383 6939;6940 6940 NNDLQDNYLSEQNK 14 1 0 Unmodified _NNDLQDNYLSEQNK_ 0 0 0 0 A0A024RAC0;Q86V48 A0A024RAC0 A0A024RAC0 LUZP1 Leucine zipper protein 1 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 851.8937 2 847.884455 1693.75436 NaN NaN NaN -0.13389 -0.00011352 NaN NaN NaN NaN 56.964 0.46458 56.964 56.659 57.124 3.8147E-06 0 0 0 0.00011203 1 35041 80.871 65.898 1 NaN NaN 0 4847600 0 4847600 4209 180 2147 2384 6941 6941 NNFAVGYR 8 0 1 Unmodified _NNFAVGYR_ 0 0 0 0 Q5JSD2;Q5JSD1;B4DKM5;A0A0A0MR02;A0A024QZT0;A0A024QZN9;P45880 Q5JSD2 Q5JSD2 VDAC2 Voltage-dependent anion-selective channel protein 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 475.74 2 470.735409 939.456264 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.466 1 71.466 70.966 71.966 0 0 0 0 0.019845 1 35901 58.981 27.692 1 4210 18 2148 2385 6942 6942 NNMFEISDR 9 0 1 Oxidation (M) _NNM(ox)FEISDR_ NNM(1)FEISDR NNM(51.19)FEISDR 0 1 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 576.2565 2 571.250763 1140.48697 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.139 1 68.139 67.639 68.639 0 0 0 0 0.010267 1 33707 51.193 33.635 1 4211 1220 2149 2386 6943 6943 346 NNNIDAAIENIENMLTSENK 20 1 0 Oxidation (M) _NNNIDAAIENIENM(ox)LTSENK_ NNNIDAAIENIENM(1)LTSENK NNNIDAAIENIENM(60.63)LTSENK 0 1 0 0 E5KNY5;P42704 E5KNY5 E5KNY5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1136.5382 2 1132.02898 2262.0434 NaN NaN NaN -0.38097 -0.00043127 NaN NaN NaN NaN 133.47 0.22723 133.47 133.28 133.51 0 0 0 0 1.3469E-08 1 81242 60.628 45.207 1 NaN NaN 0 7615400 0 7615400 4212 783 2150 2387 6944 6944 210 NNPSPPPDSDLER 13 0 1 Phospho (STY) _NNPS(ph)PPPDSDLER_ NNPS(1)PPPDSDLER NNPS(34.47)PPPDS(-34.47)DLER 0 0 1 0 Q96CJ7;E7ESD5;B4DIV6;A0A0S2Z3Q2;E9PLN6;A0A0S2Z3V9;F2Z2Y1;B4DRQ6;O95677 Q96CJ7 Q96CJ7 EYA4 Eyes absent homolog;Eyes absent homolog 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 759.3166 2 759.317035 1516.61952 70248.13 0.55971 0.00042499 0.30635 0.00023262 0.86606 0.00065761 759.317309137921 764.321468131739 53.547 1.1344 53.547 52.947 54.081 0 452 94 6 0 0 0 0.0055048 1 22186 51.135 44.751 2 1.0191 1.2528 0 30953000 15525000 15428000 4213 347 2151 2388 6945 6945 545 NNSNTCNIENELEDSRK 17 1 1 Phospho (STY) _NNS(ph)NTCNIENELEDSRK_ NNS(0.939)NT(0.061)CNIENELEDSRK NNS(11.91)NT(-11.91)CNIENELEDS(-53.54)RK 0 0 1 1 A0A024R9G7;Q6PL18;A0A0B4J211 A0A024R9G7 A0A024R9G7 ATAD2 ATPase family AAA domain-containing protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 706.2922 3 706.291557 2115.85284 72682.63 1.0012 0.00070717 0.2009 0.00014189 1.2021 0.00084906 706.626049319814 712.299559800177 72.432 0.69101 72.432 72.036 72.727 0 350 64 7 0 0 0 1.6062E-05 1 45806 57.525 48.12 3 0.9461 0.72414 0 24223000 11395000 12828000 4214 166 2152 2389 6946 6946 259 NNSPPTVGAFGHTR 14 0 1 Phospho (STY) _NNS(ph)PPTVGAFGHTR_ NNS(1)PPTVGAFGHTR NNS(36.56)PPT(-36.56)VGAFGHT(-69.38)R 0 0 1 0 Q86XL3;F5H1D4 Q86XL3 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 515.5673 3 512.231461 1533.67256 84760.69 0.07523 3.8535E-05 -0.022189 -1.1366E-05 0.053041 2.7169E-05 512.231353037417 515.567602424601 73.775 1.1095 73.775 73.117 74.227 0 191 93 5 0 0 0 9.5234E-05 1 37826 72.772 63.239 3 2.1132 2.6255 0 36133000 12225000 23908000 4215 1141 2153 2390 6947 6947 2187 NNSPPTVGAFGHTR 14 0 1 Phospho (STY) _NNS(ph)PPTVGAFGHTR_ NNS(1)PPTVGAFGHTR NNS(35.2)PPT(-35.2)VGAFGHT(-68.25)R 0 0 1 0 Q86XL3;F5H1D4 Q86XL3 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 772.8475 2 767.843554 1533.67256 NaN NaN NaN 0.0012582 9.661E-07 NaN NaN NaN NaN 73.916 0.25159 73.916 73.85 74.102 0 0 0 0 7.6892E-05 1 37731 80.534 61.14 3 NaN NaN 0 5841100 0 5841100 4216 1141 2153 2390 6948 6948 2187 NNSPPTVGAFGHTR 14 0 1 Phospho (STY) _NNS(ph)PPTVGAFGHTR_ NNS(0.944)PPT(0.056)VGAFGHTR NNS(12.26)PPT(-12.26)VGAFGHT(-35.71)R 0 0 1 0 Q86XL3;F5H1D4 Q86XL3 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 515.5683 3 512.231461 1533.67256 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.224 1 73.224 72.724 73.724 0 0 0 0 0.0014195 1 37255 44.807 30.649 3 4217 1141 2153 2390 6949 6949 2187 NNSPPTVGAFGHTR 14 0 1 Phospho (STY) _NNS(ph)PPTVGAFGHTR_ NNS(0.998)PPT(0.002)VGAFGHTR NNS(28.23)PPT(-28.23)VGAFGHT(-51.26)R 0 0 1 0 Q86XL3;F5H1D4 Q86XL3 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 772.848 2 767.843554 1533.67256 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.441 1 73.441 72.941 73.941 0 0 0 0 1.3657E-06 1 37426 64.675 46.811 3 4218 1141 2153 2390 6950 6950 2187 NNSPPTVGAFGHTR 14 0 1 Phospho (STY) _NNS(ph)PPTVGAFGHTR_ NNS(0.988)PPT(0.012)VGAFGHTR NNS(19.1)PPT(-19.1)VGAFGHT(-38.48)R 0 0 1 0 Q86XL3;F5H1D4 Q86XL3 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 515.5675 3 512.231461 1533.67256 83456.42 0.84868 0.00043472 -0.387 -0.00019823 0.46168 0.00023649 512.23120531216 515.567325592829 57.685 1.2764 57.685 57.246 58.522 3.8147E-06 456 115 7 0 0 0 0.0013229 2 35325 48.229 35.869 3 2.4727 1.7526 0 30771000 8408300 22363000 4219 1141 2153 2390 6951;6952 6951 2187 NNSPPTVGAFGHTR 14 0 1 Phospho (STY) _NNS(ph)PPTVGAFGHTR_ NNS(0.992)PPT(0.008)VGAFGHTR NNS(21.17)PPT(-21.17)VGAFGHT(-35.26)R 0 0 1 0 Q86XL3;F5H1D4 Q86XL3 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 773.3486 2 767.843554 1533.67256 NaN NaN NaN -1.7409 -0.0013367 NaN NaN NaN NaN 57.664 0.69001 57.664 57.337 58.027 0 0 0 0 0.0066042 1 35450 41.695 31.172 3 NaN NaN 0 9299100 0 9299100 4220 1141 2153 2390 6953 6953 2187 NNTAAETEDDESDGEDRGGGTSGSLR 26 0 2 Phospho (STY) _NNTAAETEDDES(ph)DGEDRGGGTSGSLR_ NNTAAETEDDES(0.988)DGEDRGGGT(0.003)S(0.005)GS(0.005)LR NNT(-162.19)AAET(-69.24)EDDES(23.18)DGEDRGGGT(-25.23)S(-23.18)GS(-23.18)LR 0 0 1 1 Q6IEH8;Q6KC79 Q6IEH8 Q6IEH8 NIPBL Nipped-B-like protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 907.692 3 907.356559 2719.04785 62629.59 1.012 0.00091826 -0.24209 -0.00021966 0.76993 0.0006986 907.690724827431 914.362822028029 26.44 0.41805 26.44 26.245 26.663 0 141 18 11 0 0 0 1.3532E-160 1 12507 195.23 180.75 6 0.75601 0.65993 0 191660000 102560000 89098000 4221 1118 2154 2391 6954 6954 2122 NPDDITQEEYGEFYK 15 1 0 Unmodified _NPDDITQEEYGEFYK_ 0 0 0 0 A0A024RD80;P08238;B4DMA2;B4DGL0;Q6PK50 A0A024RD80 A0A024RD80 HSP90AB1 Heat shock protein HSP 90-beta MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 928.4121 2 924.402146 1846.78974 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.496 1 94.496 93.996 94.996 0 0 0 0 0.0024182 1 52906 45.915 30.943 1 4222 223 2155 2392 6955 6955 NPPSPRPSQLPVLDR 15 0 2 Phospho (STY) _NPPS(ph)PRPSQLPVLDR_ NPPS(0.969)PRPS(0.031)QLPVLDR NPPS(14.95)PRPS(-14.95)QLPVLDR 0 0 1 1 A0A0A0MS59;Q6ZRS2;A0A0C4DFX4 A0A0A0MS59 A0A0A0MS59 SRCAP Helicase SRCAP MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 591.6376 3 584.964604 1751.87198 80192.84 1.0846 0.00063446 0.49846 0.00029158 1.5831 0.00092604 585.299087476245 591.637175445387 93.517 1.0408 93.517 93.055 94.095 0 433 85 8 0 0 0 3.0484E-05 2 52145 73.022 62.858 2 0.56274 0.69965 0 74418000 42748000 31670000 4223 292 2156 2393 6956;6957 6956 468 NPPSPRPSQLPVLDR 15 0 2 Phospho (STY) _NPPS(ph)PRPSQLPVLDR_ NPPS(0.96)PRPS(0.04)QLPVLDR NPPS(13.81)PRPS(-13.81)QLPVLDR 0 0 1 1 A0A0A0MS59;Q6ZRS2;A0A0C4DFX4 A0A0A0MS59 A0A0A0MS59 SRCAP Helicase SRCAP MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 584.9653 3 584.964604 1751.87198 78662.51 1.0523 0.00061558 -0.11071 -6.4761E-05 0.94162 0.00055082 584.964585797918 591.636634107014 90.46 1.1473 90.46 89.922 91.07 0 646 108 8 0 0 0 0.00042909 1 58512 55.186 45.021 2 1.0315 0.89485 0 54705000 25108000 29597000 4224 292 2156 2393 6958 6958 468 NPRESTGNMVTGQTVCK 17 1 1 Oxidation (M),Phospho (STY) _NPRES(ph)TGNM(ox)VTGQTVCK_ NPRESTGNM(1)VTGQTVCK NPRES(0.763)T(0.237)GNMVTGQTVCK NPRESTGNM(57.81)VTGQTVCK NPRES(5.09)T(-5.09)GNMVT(-42.04)GQT(-50.37)VCK 0 1 1 1 Q15021;B4E0B7;B3KMS0;B3KY03;E7EN77;Q6ZV00 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 659.2873 3 658.951818 1973.83363 73375.78 1.0068 0.00066344 -0.5539 -0.00036499 0.45291 0.00029845 659.28600298772 664.959234815211 47.577 0.99616 47.577 46.992 47.988 3.8147E-06 338 68 7 0 0 0 2.4767E-05 2 18328 57.806 57.806 4 0.86317 0.98927 0 24315000 9601300 14714000 4225 1067 2157 2394 6959;6960 6959 308 2009 NPSDSAVHSPFTK 13 1 0 Phospho (STY) _NPSDSAVHS(ph)PFTK_ NPS(0.009)DS(0.009)AVHS(0.897)PFT(0.085)K NPS(-19.8)DS(-19.8)AVHS(10.25)PFT(-10.25)K 0 0 1 0 B4DZJ6;B4DYY5;F8W726;Q14157 B4DZJ6 B4DZJ6 UBAP2L Ubiquitin-associated protein 2-like MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 492.2197 3 489.548568 1465.62387 88533.34 0.52302 0.00025604 -0.12739 -6.2366E-05 0.39562 0.00019368 489.882759013892 492.219955969547 35.953 0.50623 35.953 35.67 36.176 0 157 41 6 0 0 0 0.002806 1 20122 44.734 37.19 4 0.86953 0.68926 0 6762200 3571700 3190500 4226 671 2158 2395 6961 6961 1114 NPSPASSSHAVLDEK 15 1 0 Phospho (STY) _NPS(ph)PASSSHAVLDEK_ NPS(1)PASSSHAVLDEK NPS(37.17)PAS(-37.17)S(-42.96)S(-48.66)HAVLDEK 0 0 1 0 B4DTN6;Q9ULJ3;Q5H9S0 B4DTN6 B4DTN6 ZBTB21;DKFZp781N1974 Zinc finger and BTB domain-containing protein 21 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 813.865 2 809.859067 1617.70358 66365.95 0.80413 0.00065123 -0.17822 -0.00014433 0.62591 0.0005069 809.859256431362 813.866230551453 59.659 1.2436 59.659 59.158 60.402 -3.8147E-06 457 93 8 0 0 0 3.1446E-12 2 26703 102.64 80.609 4 0.59271 0.73619 0 97577000 61442000 36134000 4227 661 2159 2396 6962;6963 6962 1102 NPSPASSSHAVLDEK 15 1 0 Phospho (STY) _NPS(ph)PASSSHAVLDEK_ NPS(0.996)PAS(0.001)S(0.001)S(0.001)HAVLDEK NPS(28.74)PAS(-28.74)S(-28.74)S(-28.74)HAVLDEK 0 0 1 0 B4DTN6;Q9ULJ3;Q5H9S0 B4DTN6 B4DTN6 ZBTB21;DKFZp781N1974 Zinc finger and BTB domain-containing protein 21 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 542.9133 3 540.241803 1617.70358 82539.84 0.52676 0.00028458 0.42105 0.00022747 0.94781 0.00051204 540.242205241542 542.913262533762 59.672 0.94755 59.672 59.294 60.241 0 369 71 8 0 0 0 0.00035806 1 26719 65.374 41.918 4 0.65731 0.8214 0 65917000 42584000 23332000 4228 661 2159 2396 6964 6964 1102 NPSPASSSHAVLDEK 15 1 0 Phospho (STY) _NPS(ph)PASSSHAVLDEK_ NPS(0.999)PAS(0.001)S(0.001)SHAVLDEK NPS(32.95)PAS(-32.95)S(-32.95)S(-36.1)HAVLDEK 0 0 1 0 B4DTN6;Q9ULJ3;Q5H9S0 B4DTN6 B4DTN6 ZBTB21;DKFZp781N1974 Zinc finger and BTB domain-containing protein 21 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 542.9135 3 540.241803 1617.70358 81937.91 0.93515 0.00050521 -0.27564 -0.00014891 0.65951 0.00035629 540.241728630122 542.913008251947 40.855 1.4135 40.855 40.203 41.617 0 724 124 8 0 0 0 0.00047303 1 23928 59.884 41.493 4 0.92269 0.61261 0 81618000 40272000 41347000 4229 661 2159 2396 6965 6965 1102 NPSPASSSHAVLDEK 15 1 0 Phospho (STY) _NPS(ph)PASSSHAVLDEK_ NPS(0.985)PAS(0.009)S(0.004)S(0.002)HAVLDEK NPS(20.48)PAS(-20.48)S(-23.88)S(-27.11)HAVLDEK 0 0 1 0 B4DTN6;Q9ULJ3;Q5H9S0 B4DTN6 B4DTN6 ZBTB21;DKFZp781N1974 Zinc finger and BTB domain-containing protein 21 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 809.8607 2 809.859067 1617.70358 67034.65 1.1414 0.0009244 0.096196 7.7905E-05 1.2376 0.0010023 809.859335492644 813.866019874392 40.888 1.6956 40.888 40.194 41.89 -3.8147E-06 884 150 8 0 0 0 0.0024227 1 24101 42.095 33.582 4 0.96902 0.64776 0 152100000 78943000 73159000 4230 661 2159 2396 6966 6966 1102 NQASDSENEELPKPR 15 1 1 Phospho (STY) _NQAS(ph)DSENEELPKPR_ NQAS(0.807)DS(0.193)ENEELPKPR NQAS(6.22)DS(-6.22)ENEELPKPR 0 0 1 1 B4DJ84;B4DGM5;B4DL52;Q96ST2 B4DJ84 B4DJ84 IWS1 Protein IWS1 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 604.9372 3 598.594905 1792.76289 81031.32 0.59385 0.00035547 -0.092654 -5.5462E-05 0.50119 0.00030001 598.594841511402 604.60228363939 58.254 0.53516 58.254 57.904 58.439 0 116 40 4 0 0 0 0.00095967 1 25698 41.86 34.979 2 0.91534 1.0016 0 10276000 5501700 4774400 4231 622 2160 2397 6967 6967 1028 NQKPSQVNGAPGSPTEPAGQK 21 2 0 Phospho (STY) _NQKPSQVNGAPGS(ph)PTEPAGQK_ NQKPSQVNGAPGS(0.768)PT(0.232)EPAGQK NQKPS(-41.06)QVNGAPGS(5.2)PT(-5.2)EPAGQK 0 0 1 1 Q9BQG0;I3L1L3;B4DE42;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1087.009 2 1086.50769 2171.00083 58411.23 0.14998 0.00016295 0.36256 0.00039392 0.51254 0.00055687 1087.0094984486 1094.52228041843 24.015 0.40303 24.015 23.8 24.203 0 193 24 10 0 0 0 6.1221E-15 1 10373 78.615 66.449 3 1.2329 0.92636 0 71897000 31640000 40257000 4232 1192 2161 2398 6968 6968 2361 NQLVTPEPTSR 11 0 1 Phospho (STY) _NQLVT(ph)PEPTSR_ NQLVT(0.973)PEPT(0.011)S(0.016)R NQLVT(17.91)PEPT(-19.53)S(-17.91)R 0 0 1 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 661.3116 2 661.311024 1320.6075 NaN NaN NaN -0.10969 -7.254E-05 NaN NaN NaN NaN 57.003 1.0736 57.003 56.558 57.631 0 0 0 0 0.00038846 1 24766 84.169 18.773 3 NaN NaN 0 16258000 16258000 0 4233 1059 2162 2399 6969 6969 2923 NQSFASTHLNQNSSR 15 0 1 Unmodified _NQSFASTHLNQNSSR_ 0 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 846.4008 2 845.898231 1689.78191 NaN NaN NaN 0.3222 0.00027255 NaN NaN NaN NaN 66.712 0.29332 66.712 66.578 66.871 0 0 0 0 0.0012142 1 32567 59.198 41.334 1 NaN NaN 0 6415000 6415000 0 4234 943 2163 2400 6970 6970 NQSFASTHLNQNSSR 15 0 1 Unmodified _NQSFASTHLNQNSSR_ 0 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 850.9034 2 845.898231 1689.78191 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.716 1 66.716 66.216 67.216 0 0 0 0 7.9877E-05 1 32588 61.11 44.857 1 4235 943 2163 2400 6971 6971 NQSFASTHLNQNSSR 15 0 1 Unmodified _NQSFASTHLNQNSSR_ 0 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 850.9042 2 845.898231 1689.78191 67638.05 0.77714 0.00065738 0.35771 0.00030259 1.1349 0.00095997 846.399783256225 850.90279863977 24.801 0.21957 24.801 24.683 24.902 0 40 9 6 0 0 0 0.0046395 2 11091 40.066 40.066 1 1.2915 1.0225 0 10368000 4786300 5581600 4236 943 2163 2400 6972;6973 6972 NQSFASTHLNQNSSR 15 0 1 Unmodified _NQSFASTHLNQNSSR_ 0 0 0 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 564.2685 3 564.267913 1689.78191 80448.92 0.40435 0.00022816 0.3085 0.00017407 0.71285 0.00040224 564.268049580305 567.604295328921 24.801 0.31426 24.801 24.627 24.941 0 52 14 6 0 0 0 0.0019975 1 11160 36.638 29.347 1 1.0581 0.81566 0 16850000 8913000 7936500 4237 943 2163 2400 6974 6974 NQSPVLEPVGR 11 0 1 Phospho (STY) _NQS(ph)PVLEPVGR_ NQS(1)PVLEPVGR NQS(69.86)PVLEPVGR 0 0 1 0 B4DKZ2;B4DG22;B7ZB17;P51812 B4DKZ2 B4DKZ2 RPS6KA3 Ribosomal protein S6 kinase alpha-3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 643.3127 2 638.308284 1274.60202 75612.38 0.74197 0.00047361 0.096059 6.1315E-05 0.83803 0.00053492 638.308174464089 643.312207664238 70.706 0.77773 70.706 70.19 70.968 0 158 75 5 0 0 0 0.0037158 2 35356 69.864 61.793 1 0.89905 1.1061 0 24402000 12717000 11685000 4238 621 2164 2401 6975;6976 6976 1027 NQVDSETHCHAER 13 0 1 Unmodified _NQVDSETHCHAER_ 0 0 0 0 M4VP52;Q59GY0;Q9NRW3 M4VP52 M4VP52 APOBEC3C DNA dC->dU-editing enzyme APOBEC-3C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 528.5622 3 528.226949 1581.65902 85456.33 0.44038 0.00023262 -0.076117 -4.0207E-05 0.36427 0.00019242 528.226965986911 531.562998368309 64.754 0.34846 64.754 64.576 64.924 0 109 25 5 0 0 0 0.0029851 1 30992 43.761 31.969 1 0.47368 0.58231 0 28703000 20086000 8617500 4239 915 2165 2402 6977 6977 NREEFEDQSLEK 12 1 1 Phospho (STY) _NREEFEDQS(ph)LEK_ NREEFEDQS(1)LEK NREEFEDQS(74.99)LEK 0 0 1 1 E7ETD6;Q12830;F5GXF5;A0A0A0MR81;B4DDK2;B4DM40;F5H176 E7ETD6;F5H176 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 811.3456 2 802.335424 1602.6563 68713.86 0.67258 0.00053963 -0.061456 -4.9308E-05 0.61112 0.00049033 802.336075487852 811.346223141153 66.878 0.81798 66.878 66.516 67.334 0 275 62 7 0 0 0 0.0012054 1 32529 74.987 54.606 1 0.53626 0.63593 0 58715000 36148000 22567000 4240 791;826 2166 2403 6978 6978 1339 NREELGFRPEYSASQLK 17 1 2 Unmodified _NREELGFRPEYSASQLK_ 0 0 0 2 B2R5W3;A0A024R3T8;P09874;B4E0E1;Q05D33;Q6PJL0 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 675.3448 3 675.344711 2023.0123 74469.04 0.67835 0.00045812 -0.0014514 -9.8016E-07 0.67689 0.00045714 675.67902996902 684.688349744836 130.58 1.1192 130.58 129.72 130.84 0 334 105 6 0 0 0 2.8736E-06 3 79153 71.344 33.316 1 0.58496 0.65473 0 12986000 5897700 7088600 4241 81 2167 2404 6979;6980;6981 6980 NREELGFRPEYSASQLK 17 1 2 Unmodified _NREELGFRPEYSASQLK_ 0 0 0 2 B2R5W3;A0A024R3T8;P09874;B4E0E1;Q05D33;Q6PJL0 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 684.6891 3 675.344711 2023.0123 74264.5 0.60226 0.00040674 0.29924 0.00020209 0.90151 0.00060883 675.344672247717 684.688561021869 131.37 0.62744 131.37 130.99 131.62 0 128 54 4 0 0 0 0.018747 1 79854 20.737 8.9686 1 0.56631 0.63712 0 15259000 8543800 6715500 4242 81 2167 2404 6982 6982 NREELGFRPEYSASQLK 17 1 2 Unmodified _NREELGFRPEYSASQLK_ 0 0 0 2 B2R5W3;A0A024R3T8;P09874;B4E0E1;Q05D33;Q6PJL0 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 685.0228 3 675.344711 2023.0123 74875.35 0.53054 0.00035829 -0.15797 -0.00010668 0.37257 0.00025161 675.678808397742 685.022905429377 132.07 0.37175 132.07 131.87 132.24 0 95 33 6 0 0 0 0.014911 1 80330 22.154 10.131 1 0.41671 0.46855 0 5017800 3022500 1995300 4243 81 2167 2404 6983 6983 NREELGFRPEYSASQLK 17 1 2 Unmodified _NREELGFRPEYSASQLK_ 0 0 0 2 B2R5W3;A0A024R3T8;P09874;B4E0E1;Q05D33;Q6PJL0 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 675.3452 3 675.344711 2023.0123 74386.82 0.49088 0.00033151 -0.11018 -7.4411E-05 0.3807 0.0002571 675.344641273015 684.688432517895 132.34 0.51195 132.34 132.18 132.7 0 120 43 5 0 0 0 2.3768E-05 3 80592 53.828 29.638 1 0.43614 0.4858 0 11152000 5063400 6089000 4244 81 2167 2404 6984;6985;6986 6984 NREELGFRPEYSASQLK 17 1 2 Unmodified _NREELGFRPEYSASQLK_ 0 0 0 2 B2R5W3;A0A024R3T8;P09874;B4E0E1;Q05D33;Q6PJL0 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 675.3448 3 675.344711 2023.0123 NaN NaN NaN -0.20228 -0.00013661 NaN NaN NaN NaN 131.12 0.78891 131.12 130.82 131.61 0 0 0 0 0.0029965 1 79644 39.143 18.755 1 NaN NaN 0 6333500 6333500 0 4245 81 2167 2404 6987 6987 NREELGFRPEYSASQLK 17 1 2 Unmodified _NREELGFRPEYSASQLK_ 0 0 0 2 B2R5W3;A0A024R3T8;P09874;B4E0E1;Q05D33;Q6PJL0 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 675.3452 3 675.344711 2023.0123 NaN NaN NaN -0.0011393 -7.6944E-07 NaN NaN NaN NaN 131.7 0.4483 131.7 131.42 131.87 1.5259E-05 0 0 0 8.032E-05 1 80117 50.04 15.22 1 NaN NaN 0 6567000 6567000 0 4246 81 2167 2404 6988 6988 NREELGFRPEYSASQLK 17 1 2 Unmodified _NREELGFRPEYSASQLK_ 0 0 0 2 B2R5W3;A0A024R3T8;P09874;B4E0E1;Q05D33;Q6PJL0 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 676.0134 3 675.344711 2023.0123 NaN NaN NaN -0.5402 -0.00036482 NaN NaN NaN NaN 133.27 0.29443 133.27 133.11 133.41 0 0 0 0 0.0098878 1 81064 34.498 3.5364 1 NaN NaN 0 5333100 5333100 0 4247 81 2167 2404 6989 6989 NRGPSPEPLK 10 1 1 Phospho (STY) _NRGPS(ph)PEPLK_ NRGPS(1)PEPLK NRGPS(80.98)PEPLK 0 0 1 1 B4DZL4;A0A024RCG4;Q92674 B4DZL4 B4DZL4 FSHPRH1;CENPI Centromere protein I MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 587.7852 2 587.784445 1173.55434 79301.47 0.63169 0.0003713 0.26725 0.00015708 0.89894 0.00052838 587.784426544597 596.795783603296 57.452 1.3239 57.452 56.813 58.137 3.8147E-06 499 111 6 0 0 0 0.00076434 3 25436 80.979 48.625 1 0.77713 0.9257 0 82774000 47041000 35733000 4248 210 2168 2405 6990;6991;6992 6992 327 NRGPSPEPLK 10 1 1 Phospho (STY) _NRGPS(ph)PEPLK_ NRGPS(1)PEPLK NRGPS(47.71)PEPLK 0 0 1 1 B4DZL4;A0A024RCG4;Q92674 B4DZL4 B4DZL4 FSHPRH1;CENPI Centromere protein I MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 392.1924 3 392.192056 1173.55434 95733.51 -0.3228 -0.0001266 0.29353 0.00011512 -0.029274 -1.1481E-05 392.19211005987 398.199638135057 57.477 1.2325 57.477 56.875 58.107 0 361 103 7 0 0 0 0.0055593 1 24933 47.712 25.475 1 0.82544 0.97619 0 48022000 25335000 22687000 4249 210 2168 2405 6993 6993 327 NRGPSPEPLK 10 1 1 Phospho (STY) _NRGPS(ph)PEPLK_ NRGPS(1)PEPLK NRGPS(140.01)PEPLK 0 0 1 1 B4DZL4;A0A024RCG4;Q92674 B4DZL4 B4DZL4 FSHPRH1;CENPI Centromere protein I MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 596.7964 2 587.784445 1173.55434 79165.14 0.72751 0.00042762 0.10983 6.4554E-05 0.83734 0.00049217 587.784612825728 596.795675073817 24.987 0.7745 24.987 24.748 25.522 0 235 38 11 0 0 0 4.0221E-15 1 11153 140.01 84.479 1 1.4128 1.0927 0 319230000 128240000 190990000 4250 210 2168 2405 6994 6994 327 NRGPSPEPLK 10 1 1 Phospho (STY) _NRGPS(ph)PEPLK_ NRGPS(1)PEPLK NRGPS(62.89)PEPLK 0 0 1 1 B4DZL4;A0A024RCG4;Q92674 B4DZL4 B4DZL4 FSHPRH1;CENPI Centromere protein I MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 398.1997 3 392.192056 1173.55434 94452.65 0.057414 2.2517E-05 -0.044733 -1.7544E-05 0.012681 4.9733E-06 392.192031642798 398.199514211368 24.998 0.52722 24.998 24.771 25.298 -1.9073E-06 157 26 9 0 0 0 0.0027078 2 11162 62.891 42.191 1 1.5094 1.1645 0 72668000 28781000 43887000 4251 210 2168 2405 6995;6996 6995 327 NRPEPHSDENGSTTPK 16 1 1 Unmodified _NRPEPHSDENGSTTPK_ 0 0 0 1 C9J9W7;B2R5U7;Q03701 C9J9W7 C9J9W7 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 595.2833 3 589.274844 1764.8027 78088.13 0.63379 0.00037348 -0.050274 -2.9625E-05 0.58352 0.00034385 589.27500508989 595.282217452327 64.425 0.61884 64.425 64.077 64.696 0 227 43 8 0 0 0 3.6614E-37 1 30541 137.73 126.62 1 1.0353 1.2313 0 73060000 33421000 39639000 4252 531 2169 2406 6997 6997 NRPPLPAGTNSK 12 1 1 Unmodified _NRPPLPAGTNSK_ 0 0 0 1 P42166;A0A024RBH7;Q59G12;A0A024RBE7;P42167;G5E972 P42166;A0A024RBE7 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 626.3442 2 626.343843 1250.67313 77169.69 0.76199 0.00047727 0.51631 0.00032339 1.2783 0.00080066 626.343691659398 635.3551861301 67.736 0.32639 67.736 67.586 67.913 0 97 27 5 0 0 0 1.5218E-52 2 33361 170.89 122.33 1 1.0564 1.2529 0 59288000 27659000 31629000 4253 989;196 2170 2407 6998;6999 6999 NRSFSLK 7 1 1 Phospho (STY) _NRS(ph)FSLK_ NRS(0.947)FS(0.053)LK NRS(12.49)FS(-12.49)LK 0 0 1 1 K7EPJ3;K7EQN7;A0A024R7H0;B4DX78;O00148;A0A0D9SEM9 K7EPJ3 K7EPJ3 DDX39A;DDX39 ATP-dependent RNA helicase DDX39A ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 466.2237 2 466.223492 930.432431 NaN NaN NaN 0.4814 0.00022444 NaN NaN NaN NaN 67.579 0.4511 67.579 67.267 67.718 0 0 0 0 0.00078103 1 33239 83.309 13.31 2 NaN NaN 0 24454000 24454000 0 4254 134 2171 2408 7000 7000 201 NRSSAVDPEPQVK 13 1 1 2 Phospho (STY) _NRS(ph)S(ph)AVDPEPQVK_ NRS(1)S(1)AVDPEPQVK NRS(78.81)S(78.81)AVDPEPQVK 0 0 2 1 X6RGJ2;Q5SSJ5;Q5SWC8 X6RGJ2 X6RGJ2 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 802.8461 2 793.83421 1585.65387 67034.21 0.84125 0.00066781 -0.0029911 -2.3744E-06 0.83826 0.00066544 793.834728581498 802.845448569611 49.489 1.7892 49.489 48.49 50.279 -3.8147E-06 920 143 9 0 0 0 0.00022128 4 20005 78.814 72.43 1 0.64672 0.76907 0 72767000 43952000 28815000 4255 1099 2172 2409 7001;7002;7003;7004 7004 2080;2081 NRSSAVDPEPQVK 13 1 1 2 Phospho (STY) _NRS(ph)S(ph)AVDPEPQVK_ NRS(1)S(1)AVDPEPQVK NRS(74.48)S(74.48)AVDPEPQVK 0 0 2 1 X6RGJ2;Q5SSJ5;Q5SWC8 X6RGJ2 X6RGJ2 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 793.8348 2 793.83421 1585.65387 67473.46 1.0533 0.00083614 0.35037 0.00027814 1.4037 0.0011143 793.83465417514 802.845664135157 38.608 1.865 38.608 37.693 39.559 0 766 165 11 0 0 0 0.00037968 1 22054 74.475 55.152 1 0.71295 0.55121 0 244390000 139210000 105180000 4256 1099 2172 2409 7005 7005 2080;2081 NRSSAVDPEPQVK 13 1 1 Phospho (STY) _NRSS(ph)AVDPEPQVK_ NRS(0.138)S(0.862)AVDPEPQVK NRS(-7.94)S(7.94)AVDPEPQVK 0 0 1 1 X6RGJ2;Q5SSJ5;Q5SWC8 X6RGJ2 X6RGJ2 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 753.8517 2 753.851045 1505.68754 68210.66 0.93066 0.00070158 0.05944 4.4809E-05 0.9901 0.00074639 753.851328376455 762.862044955443 56.38 2.3393 56.38 55.812 58.152 0 1107 195 11 0 0 0 2.6968E-06 3 24693 91.441 73.129 2 0.46554 0.57258 0 971220000 651460000 319750000 4257 1099 2172 2410 7006;7007;7008 7008 2080;2081 NRSSAVDPEPQVK 13 1 1 Phospho (STY) _NRS(ph)SAVDPEPQVK_ NRS(0.5)S(0.5)AVDPEPQVK NRS(0)S(0)AVDPEPQVK 0 0 1 1 X6RGJ2;Q5SSJ5;Q5SWC8 X6RGJ2 X6RGJ2 HP1BP3 Heterochromatin protein 1-binding protein 3 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 508.9106 3 502.903122 1505.68754 NaN NaN NaN 0.030707 1.5443E-05 NaN NaN NaN NaN 56.41 0.70916 56.41 56.024 56.733 0 0 0 0 0.0039731 1 24307 42.149 27.273 2 NaN NaN 0 20015000 0 20015000 4258 1099 2172 2410 7009 7009 2080;2081 NRSSAVDPEPQVK 13 1 1 Phospho (STY) _NRSS(ph)AVDPEPQVK_ NRS(0.036)S(0.964)AVDPEPQVK NRS(-14.3)S(14.3)AVDPEPQVK 0 0 1 1 X6RGJ2;Q5SSJ5;Q5SWC8 X6RGJ2 X6RGJ2 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 753.8514 2 753.851045 1505.68754 69479.2 0.85464 0.00064427 0.10116 7.626E-05 0.9558 0.00072053 753.852075308061 762.861839004675 28.049 1.8833 28.049 27.602 29.485 0 1013 131 13 0 0 0 3.1923E-33 2 13672 151.1 124.59 2 0.54182 0.42056 0 2474600000 1650100000 824570000 4259 1099 2172 2410 7010;7011 7011 2080;2081 NRSSAVDPEPQVK 13 1 1 Phospho (STY) _NRSS(ph)AVDPEPQVK_ NRS(0.422)S(0.578)AVDPEPQVK NRS(-1.36)S(1.36)AVDPEPQVK 0 0 1 1 X6RGJ2;Q5SSJ5;Q5SWC8 X6RGJ2 X6RGJ2 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 753.8514 2 753.851045 1505.68754 69553 0.88008 0.00066345 0.0055628 4.1935E-06 0.88564 0.00066764 753.851164646157 762.862287971781 29.872 1.7623 29.872 29.3 31.062 0 455 128 9 0 0 0 0.0043051 1 15392 50.843 35.577 2 0.58598 0.4527 0 156220000 101560000 54659000 4260 1099 2172 2410 7012 7012 2080;2081 NRSSAVDPEPQVK 13 1 1 Phospho (STY) _NRS(ph)SAVDPEPQVK_ NRS(0.5)S(0.5)AVDPEPQVK NRS(0)S(0)AVDPEPQVK 0 0 1 1 X6RGJ2;Q5SSJ5;Q5SWC8 X6RGJ2 X6RGJ2 HP1BP3 Heterochromatin protein 1-binding protein 3 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 762.8631 2 753.851045 1505.68754 NaN NaN NaN NaN NaN NaN NaN NaN NaN 28.734 1 28.734 28.234 29.234 0 0 0 0 0.0080805 1 14525 42.568 27.303 2 4261 1099 2172 2410 7013 7013 2080;2081 NRTSFTQEQIEALEK 15 1 1 Phospho (STY) _NRT(ph)SFTQEQIEALEK_ NRT(0.631)S(0.364)FT(0.005)QEQIEALEK NRT(2.39)S(-2.39)FT(-21.1)QEQIEALEK 0 0 1 1 Q59GD2;D1KF47;Q66SS1;B3KQG1;F1T0F8;D3DQZ8;P26367 Q59GD2 Q59GD2 PAX6 Paired box protein Pax-6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 937.4398 2 937.438212 1872.86187 63442.47 1.0323 0.00096767 -0.023784 -2.2296E-05 1.0085 0.00094538 937.437765042019 946.450006704446 97.527 1.0365 97.527 97.141 98.177 7.6294E-06 378 87 6 0 0 0 1.1058E-24 2 55499 128.79 96.875 3 0.37267 0.44312 0 72097000 50269000 21828000 4262 592 2173 2411 7014;7015 7015 976;2774 NRTSFTQEQIEALEK 15 1 1 Phospho (STY) _NRT(ph)SFTQEQIEALEK_ NRT(0.483)S(0.483)FT(0.034)QEQIEALEK NRT(0)S(0)FT(-11.51)QEQIEALEK 0 0 1 1 Q59GD2;D1KF47;Q66SS1;B3KQG1;F1T0F8;D3DQZ8;P26367 Q59GD2 Q59GD2 PAX6 Paired box protein Pax-6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 631.3033 3 625.294567 1872.86187 76346.54 1.0639 0.00066522 -0.25639 -0.00016032 0.80747 0.0005049 625.628728810375 631.301694885889 97.478 1.0052 97.478 97.141 98.146 -7.6294E-06 268 84 6 0 0 0 0.00043621 1 55120 61.276 52.453 3 0.41732 0.49007 0 39653000 28861000 10792000 4263 592 2173 2411 7016 7016 976;2774 NRTSFTQEQIEALEK 15 1 1 Phospho (STY) _NRT(ph)SFTQEQIEALEK_ NRT(0.555)S(0.394)FT(0.052)QEQIEALEK NRT(1.49)S(-1.49)FT(-10.3)QEQIEALEK 0 0 1 1 Q59GD2;D1KF47;Q66SS1;B3KQG1;F1T0F8;D3DQZ8;P26367 Q59GD2 Q59GD2 PAX6 Paired box protein Pax-6 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 937.9403 2 937.438212 1872.86187 62509 0.88477 0.00082942 0.064531 6.0493E-05 0.9493 0.00088991 937.438419291416 946.450005089391 91.771 1.2211 91.771 91.205 92.426 0 824 119 11 0 0 0 0.0024083 1 59044 46.873 34.376 3 0.95543 0.7373 0 82207000 41966000 40241000 4264 592 2173 2411 7017 7017 976;2774 NRTSFTQEQIEALEK 15 1 1 Phospho (STY) _NRT(ph)SFTQEQIEALEK_ NRT(0.387)S(0.387)FT(0.226)QEQIEALEK NRT(0)S(0)FT(-2.34)QEQIEALEK 0 0 1 1 Q59GD2;D1KF47;Q66SS1;B3KQG1;F1T0F8;D3DQZ8;P26367 Q59GD2 Q59GD2 PAX6 Paired box protein Pax-6 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 625.2956 3 625.294567 1872.86187 76805.61 1.0566 0.00066068 0.16219 0.00010141 1.2188 0.0007621 625.295079367317 631.302094278165 91.786 0.95492 91.786 91.31 92.265 -7.6294E-06 533 93 8 0 0 0 0.00067173 1 59210 44.029 31.744 3 1.0038 0.76998 0 27191000 15051000 12140000 4265 592 2173 2411 7018 7018 976;2774 NSAEEEVLSSEK 12 1 0 Phospho (STY) _NSAEEEVLS(ph)SEK_ NSAEEEVLS(0.806)S(0.194)EK NS(-185.09)AEEEVLS(6.2)S(-6.2)EK 0 0 1 0 A0A0U1RRH6;O94880 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 705.3007 2 701.292694 1400.57083 73641.65 0.88182 0.00061841 -0.016954 -1.189E-05 0.86486 0.00060652 701.292664253345 705.299876460629 59.368 1.1373 59.368 58.713 59.85 0 461 90 7 0 0 0 2.7069E-94 2 26745 200.97 181.23 3 0.58402 0.73952 0 43363000 27288000 16075000 4266 368 2174 2412 7019;7020 7020 577;578 NSAEEEVLSSEK 12 1 0 Phospho (STY) _NSAEEEVLSS(ph)EK_ NSAEEEVLS(0.338)S(0.662)EK NS(-107.21)AEEEVLS(-2.92)S(2.92)EK 0 0 1 0 A0A0U1RRH6;O94880 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 705.3002 2 701.292694 1400.57083 72050.89 1.1493 0.00080598 -0.20885 -0.00014646 0.94043 0.00065951 701.292562168981 705.299536651916 52.891 1.3951 52.891 52.227 53.622 -3.8147E-06 643 121 7 0 0 0 9.7215E-10 2 32066 107.46 88.071 3 1.3497 0.88058 0 32445000 13776000 18669000 4267 368 2174 2412 7021;7022 7022 577;578 NSAILSDPSVFSPLNK 16 1 0 Phospho (STY) _NSAILSDPSVFS(ph)PLNK_ NSAILSDPS(0.004)VFS(0.996)PLNK NS(-131.56)AILS(-75.34)DPS(-23.55)VFS(23.55)PLNK 0 0 1 0 Q03164;E9PR05;Q9UPD0;Q9Y6P1;Q86YP1;Q86YN9 Q03164 Q03164 KMT2A;MLL Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 888.9373 2 884.929492 1767.84443 65055.46 0.70114 0.00062046 0.1931 0.00017088 0.89424 0.00079134 884.929715198292 888.936725676848 121.34 1.3543 121.34 120.99 122.35 7.6294E-06 597 104 10 0 0 0 2.1591E-43 3 73450 145.54 145.54 4 0.85173 1.0538 0 263790000 141460000 122330000 4268 1034 2175 2413 7023;7024;7025 7025 1888;1889 NSAILSDPSVFSPLNK 16 1 0 Phospho (STY) _NSAILSDPSVFS(ph)PLNK_ NSAILSDPS(0.003)VFS(0.997)PLNK NS(-100.29)AILS(-43.04)DPS(-25.16)VFS(25.16)PLNK 0 0 1 0 Q03164;E9PR05;Q9UPD0;Q9Y6P1;Q86YP1;Q86YN9 Q03164 Q03164 KMT2A;MLL Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 888.9377 2 884.929492 1767.84443 64528.41 0.98888 0.00087509 -0.052582 -4.6531E-05 0.93629 0.00082855 884.929612132025 888.936692894377 129.96 1.6842 129.96 129.53 131.22 0 1030 160 12 0 0 0 4.0399E-16 2 84155 105.9 105.9 4 1.8293 1.2206 0 454380000 156230000 298150000 4269 1034 2175 2413 7026;7027 7027 1888;1889 NSAILSDPSVFSPLNK 16 1 0 2 Phospho (STY) _NSAILS(ph)DPSVFS(ph)PLNK_ NSAILS(0.999)DPS(0.002)VFS(1)PLNK NS(-68.1)AILS(29.35)DPS(-29.35)VFS(33.1)PLNK 0 0 2 0 Q03164;E9PR05;Q9UPD0;Q9Y6P1;Q86YP1;Q86YN9 Q03164 Q03164 KMT2A;MLL Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 924.9133 2 924.912657 1847.81076 63855.79 0.74737 0.00069125 0.15322 0.00014172 0.90059 0.00083297 924.912839433577 928.919832381728 129.12 0.77025 129.12 128.8 129.57 0 431 65 9 0 0 0 5.1502E-30 3 78381 123.55 111.63 6 0.76006 0.96085 0 45459000 26668000 18791000 4270 1034 2175 2414 7028;7029;7030 7030 1888;1889 NSAILSDPSVFSPLNKSETK 20 2 0 2 Phospho (STY) _NSAILSDPSVFS(ph)PLNKS(ph)ETK_ NSAILS(0.015)DPS(0.164)VFS(0.721)PLNKS(0.55)ET(0.55)K NS(-38.24)AILS(-18.65)DPS(-7.12)VFS(4.16)PLNKS(0)ET(0)K 0 0 2 1 Q03164;E9PR05;Q9UPD0;Q9Y6P1;Q86YP1;Q86YN9 Q03164 Q03164 KMT2A;MLL Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 765.6851 3 765.349951 2293.02802 71980.58 0.85248 0.00065245 0.61282 0.00046902 1.4653 0.0011215 765.684270980224 770.694295528959 116.16 0.53015 116.16 115.86 116.39 7.6294E-06 140 47 6 0 0 0 0.0001097 1 69338 40.104 33.876 15 0.82567 0.90254 0 13732000 8396400 5336000 4271 1034 2176 2415 7031 7031 1888;1889;1890;2910 NSDDAPWSPK 10 1 0 Phospho (STY) _NSDDAPWS(ph)PK_ NSDDAPWS(1)PK NS(-80.71)DDAPWS(80.71)PK 0 0 1 0 Q9UPP1;H0Y3N9;H0Y589 Q9UPP1 Q9UPP1 PHF8 Histone lysine demethylase PHF8 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 598.7344 2 598.734618 1195.45468 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.726 1 66.726 66.226 67.226 0 0 0 0 0.00067571 1 32596 96.371 57.588 2 4272 1243 2177 2416 7032 7032 2549 NSDLLTSPDVGLLK 14 1 0 Phospho (STY) _NSDLLTS(ph)PDVGLLK_ NSDLLT(0.001)S(0.999)PDVGLLK NS(-215.26)DLLT(-29.99)S(29.99)PDVGLLK 0 0 1 0 P05412 P05412 P05412 JUN Transcription factor AP-1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 776.3882 2 776.386929 1550.7593 69047.87 0.69872 0.00054248 0.12243 9.5053E-05 0.82115 0.00063753 776.387233252406 780.394039612249 121.93 1.9285 121.93 121.33 123.26 0 936 152 12 0 0 0 2.2453E-232 4 73823 255.85 223.44 3 0.92851 1.1459 0 832780000 428280000 404500000 4273 957 2178 2417 7033;7034;7035;7036 7034 1673;1674;2868 NSDLLTSPDVGLLK 14 1 0 Phospho (STY) _NSDLLTS(ph)PDVGLLK_ NSDLLT(0.065)S(0.934)PDVGLLK NS(-38.37)DLLT(-11.55)S(11.55)PDVGLLK 0 0 1 0 P05412 P05412 P05412 JUN Transcription factor AP-1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 780.3942 2 776.386929 1550.7593 69807.09 0.77961 0.00060528 0.42497 0.00032994 1.2046 0.00093522 776.387538421199 780.393877511721 123.3 0.39206 123.3 123.17 123.56 0 88 34 6 0 0 0 0.0025417 1 74651 62.357 62.357 3 1.5638 1.97 0 50329000 25377000 24952000 4274 957 2178 2417 7037 7037 1673;1674;2868 NSDLLTSPDVGLLK 14 1 0 Phospho (STY) _NSDLLT(ph)SPDVGLLK_ NSDLLT(0.5)S(0.5)PDVGLLK NS(-42.91)DLLT(0)S(0)PDVGLLK 0 0 1 0 P05412 P05412 P05412 JUN Transcription factor AP-1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 776.3893 2 776.386929 1550.7593 NaN NaN NaN NaN NaN NaN NaN NaN NaN 123.7 1 123.7 123.2 124.2 0 0 0 0 0.0001678 1 74920 59.542 50.109 3 4275 957 2178 2417 7038 7038 1673;1674;2868 NSDLLTSPDVGLLK 14 1 0 Phospho (STY) _NSDLLTS(ph)PDVGLLK_ NSDLLTS(1)PDVGLLK NS(-202.17)DLLT(-34.65)S(34.65)PDVGLLK 0 0 1 0 P05412 P05412 P05412 JUN Transcription factor AP-1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 776.3878 2 776.386929 1550.7593 68833.49 1.0703 0.000831 -0.10582 -8.2157E-05 0.96452 0.00074884 776.387530171178 780.393908731283 130.79 1.4332 130.79 130.08 131.51 1.5259E-05 1170 138 13 0 0 0 5.5972E-207 2 84590 250.52 219.91 3 1.171 0.78025 0 1113300000 530010000 583320000 4276 957 2178 2417 7039;7040 7040 1673;1674;2868 NSDLLTSPDVGLLK 14 1 0 Phospho (STY) _NSDLLTS(ph)PDVGLLK_ NSDLLT(0.244)S(0.756)PDVGLLK NS(-34.31)DLLT(-4.92)S(4.92)PDVGLLK 0 0 1 0 P05412 P05412 P05412 JUN Transcription factor AP-1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 780.3947 2 776.386929 1550.7593 69797.93 1.0771 0.00083623 0.02858 2.2189E-05 1.1057 0.00085842 776.888433248742 780.394005280354 131.59 0.70325 131.59 131.45 132.15 0 247 66 6 0 0 0 0.0038423 1 85031 43.316 36.463 3 1.116 0.82579 0 8689400 2619300 6070000 4277 957 2178 2417 7041 7041 1673;1674;2868 NSDLLTSPDVGLLK 14 1 0 2 Phospho (STY) _NS(ph)DLLTS(ph)PDVGLLK_ NS(1)DLLT(0.032)S(0.968)PDVGLLK NS(69.15)DLLT(-14.81)S(14.81)PDVGLLK 0 0 2 0 P05412 P05412 P05412 JUN Transcription factor AP-1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 816.3708 2 816.370094 1630.72563 67211.08 0.90056 0.00073519 -0.034419 -2.8098E-05 0.86614 0.00070709 816.37029377565 820.37731318252 130.08 0.75104 130.08 129.77 130.52 0 266 69 6 0 0 0 6.5462E-12 2 78961 102.38 87.347 3 0.41963 0.50634 0 16693000 11614000 5078400 4278 957 2178 2418 7042;7043 7042 1673;1674;2868 NSDLLTSPDVGLLK 14 1 0 2 Phospho (STY) _NSDLLT(ph)S(ph)PDVGLLK_ NS(0.002)DLLT(0.999)S(0.999)PDVGLLK NS(-30.84)DLLT(30.84)S(30.84)PDVGLLK 0 0 2 0 P05412 P05412 P05412 JUN Transcription factor AP-1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 816.3688 2 816.370094 1630.72563 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.4 1 131.4 130.9 131.9 0 0 0 0 0.013169 1 79932 40.025 29.793 3 4279 957 2178 2418 7044 7044 1673;1674;2868 NSEPAGLETPEAK 13 1 0 Phospho (STY) _NSEPAGLET(ph)PEAK_ NSEPAGLET(1)PEAK NS(-35.83)EPAGLET(35.83)PEAK 0 0 1 0 V9GYZ6;Q3KQZ8;B4DKX5;P07814 V9GYZ6 V9GYZ6 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 711.8112 2 711.811054 1421.60755 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.713 1 53.713 53.213 54.213 -3.8147E-06 0 0 0 0.033529 1 22542 43.03 20.556 2 4280 634 2179 2419 7045 7045 2786 NSESLHQENKPGSVK 15 2 0 Unmodified _NSESLHQENKPGSVK_ 0 0 0 1 J3QQW9;A8K1U9;Q15022 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 551.9439 3 551.944547 1652.81181 81132.78 0.41765 0.00023052 -0.40587 -0.00022402 0.011778 6.5011E-06 551.944018082451 557.287227733419 66.484 0.32739 66.484 66.345 66.673 0 104 21 6 0 0 0 3.5882E-23 1 32388 122.12 122.12 1 1.0883 1.3797 0 69743000 32185000 37558000 4281 446 2180 2420 7046 7046 NSESLHQENKPGSVKPTQTIAVK 23 3 0 Unmodified _NSESLHQENKPGSVKPTQTIAVK_ 0 0 0 2 J3QQW9;A8K1U9;Q15022 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 629.8458 4 623.833043 2491.30306 77732.22 1.4322 0.00089348 -0.44178 -0.0002756 0.99047 0.00061789 624.083199790275 630.09417583727 101.67 0.94419 101.67 101.23 102.17 -7.6294E-06 232 81 6 0 0 0 0.0001691 2 58756 33.45 25.828 1 0.9422 1.1933 0 23154000 10438000 12715000 4282 446 2181 2421 7047;7048 7048 NSESLHQENKPGSVKPTQTIAVK 23 3 0 Unmodified _NSESLHQENKPGSVKPTQTIAVK_ 0 0 0 2 J3QQW9;A8K1U9;Q15022 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 624.0844 4 623.833043 2491.30306 77882.55 1.3648 0.00085141 -0.63206 -0.0003943 0.73274 0.00045711 624.083095956051 629.843739691847 102.51 0.68021 102.51 102.26 102.94 0 122 49 4 0 0 0 0.0052379 2 59222 21.291 21.291 1 0.93099 1.1791 0 15333000 7811200 7521400 4283 446 2181 2421 7049;7050 7049 NSESLHQENKPGSVKPTQTIAVK 23 3 0 Unmodified _NSESLHQENKPGSVKPTQTIAVK_ 0 0 0 2 J3QQW9;A8K1U9;Q15022 J3QQW9 J3QQW9 SUZ12 Polycomb protein SUZ12 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 624.0858 4 623.833043 2491.30306 NaN NaN NaN 0.62485 0.0003898 NaN NaN NaN NaN 101.94 0.38389 101.94 101.87 102.26 0 0 0 0 0.0069084 1 58787 26.417 18.229 1 NaN NaN 0 9112100 9112100 0 4284 446 2181 2421 7051 7051 NSKSPEEHLEEMMK 14 2 0 2 Oxidation (M),Phospho (STY) _NSKS(ph)PEEHLEEM(ox)M(ox)K_ NSKSPEEHLEEM(1)M(1)K NSKS(1)PEEHLEEMMK NSKSPEEHLEEM(95.66)M(95.66)K NS(-46.47)KS(46.47)PEEHLEEMMK 0 2 1 1 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 606.2543 3 600.910848 1799.71072 NaN NaN NaN -0.63488 -0.0003815 NaN NaN NaN NaN 18.829 0.91039 18.829 18.475 19.385 0 0 0 0 1.3684E-09 1 5681 95.658 80.031 2 NaN NaN 0 380040000 0 380040000 4285 1232 2182 2422 7052 7052 355;356 2515 NSLPDTVQIR 10 0 1 Unmodified _NSLPDTVQIR_ 0 0 0 0 P56537;B7ZBH1 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 576.8174 2 571.811845 1141.60914 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.603 1 74.603 74.103 75.103 0 0 0 0 0.0080118 1 47426 55.549 37.564 1 4286 1010 2183 2423 7053 7053 NSNFSVQHPSSTSPTEK 17 1 0 Phospho (STY) _NSNFSVQHPS(ph)STSPTEK_ NSNFSVQHPS(0.271)S(0.271)T(0.271)S(0.173)PT(0.013)EK NS(-56.33)NFS(-51.5)VQHPS(0)S(0)T(0)S(-1.96)PT(-13.08)EK 0 0 1 0 A0JP10;Q03468;B4DZN6;Q59FF6 A0JP10 A0JP10 ERCC6 DNA excision repair protein ERCC-6 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 967.9233 2 963.915101 1925.81565 NaN NaN NaN -0.32259 -0.00031095 NaN NaN NaN NaN 35.026 0.53736 35.026 34.771 35.309 -3.8147E-06 0 0 0 1.5671E-06 1 19522 66.289 23.721 7 NaN NaN 0 13365000 0 13365000 4287 399 2184 2424 7054 7054 680;681;2712 NSNLVGAAHEELQQSR 16 0 1 Unmodified _NSNLVGAAHEELQQSR_ 0 0 0 0 P02545;W8QEH3;Q5TCI8;Q5I6Y5;Q3BDU5;Q8N519 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 877.4362 2 876.934813 1751.85507 66029.58 0.68638 0.00060191 -0.21761 -0.00019083 0.46877 0.00041108 877.436143978574 881.938771026995 86.148 0.77437 86.148 85.571 86.346 0 194 72 4 0 0 0 0.00024207 1 46447 65.805 65.805 1 1.2615 1.5595 0 33597000 13167000 20430000 4288 954 2185 2425 7055 7055 NSNLVGAAHEELQQSR 16 0 1 Unmodified _NSNLVGAAHEELQQSR_ 0 0 0 0 P02545;W8QEH3;Q5TCI8;Q5I6Y5;Q3BDU5;Q8N519 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 881.9382 2 876.934813 1751.85507 66076.29 0.67868 0.00059515 -0.29738 -0.00026079 0.38129 0.00033437 876.934593251222 881.93894460721 86.288 0.88512 86.288 85.918 86.804 7.6294E-06 166 83 4 0 0 0 1.8299E-29 2 46725 124.62 106.81 1 1.1486 1.4274 0 36247000 20856000 15391000 4289 954 2185 2425 7056;7057 7056 NSNLVGAAHEELQQSR 16 0 1 Unmodified _NSNLVGAAHEELQQSR_ 0 0 0 0 P02545;W8QEH3;Q5TCI8;Q5I6Y5;Q3BDU5;Q8N519 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 881.938 2 876.934813 1751.85507 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.412 1 85.412 84.912 85.912 0 0 0 0 5.608E-06 1 46117 66.285 54.752 1 4290 954 2185 2425 7058 7058 NSNLVGAAHEELQQSR 16 0 1 Unmodified _NSNLVGAAHEELQQSR_ 0 0 0 0 P02545;W8QEH3;Q5TCI8;Q5I6Y5;Q3BDU5;Q8N519 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 881.9403 2 876.934813 1751.85507 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.514 1 85.514 85.014 86.014 0 0 0 0 0.00077953 1 46176 52.5 36.961 1 4291 954 2185 2425 7059 7059 NSPEDLGLSLTGDSCK 16 1 0 Phospho (STY) _NS(ph)PEDLGLSLTGDSCK_ NS(1)PEDLGLSLTGDSCK NS(57.49)PEDLGLS(-57.49)LT(-69.23)GDS(-76.89)CK 0 0 1 0 B7Z3E7;A6NNK5;Q12888;C9JXV0;A8KA50 B7Z3E7 B7Z3E7 TP53BP1 Tumor suppressor p53-binding protein 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 890.8812 2 886.874056 1771.73356 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.9 1 103.9 103.4 104.4 7.6294E-06 0 0 0 3.4872E-07 1 60072 79.332 60.601 4 4292 430 2186 2426 7060 7060 746 NSPLEPDTSTPLK 13 1 0 Phospho (STY) _NS(ph)PLEPDTSTPLK_ NS(1)PLEPDTSTPLK NS(80.15)PLEPDT(-80.15)S(-80.37)T(-80.45)PLK 0 0 1 0 A5PKX7;Q92794;C9K0F9;Q712H4 A5PKX7 A5PKX7 MYST3;KAT6A;CBP/MOZ Histone acetyltransferase;Histone acetyltransferase KAT6A ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 743.8496 2 739.842354 1477.67015 NaN NaN NaN 0.24941 0.00018453 NaN NaN NaN NaN 77.687 0.88743 77.687 77.216 78.103 0 0 0 0 3.699E-10 1 40444 96.247 63.052 4 NaN NaN 0 26392000 0 26392000 4293 423 2187 2427 7061 7061 731 NSPVDQSDFFYEFSK 15 1 0 Phospho (STY) _NS(ph)PVDQSDFFYEFSK_ NS(1)PVDQSDFFYEFSK NS(50.28)PVDQS(-50.28)DFFY(-80.01)EFS(-92.33)K 0 0 1 0 X6R3Q3;A0A024R235;Q5VYS8 X6R3Q3 X6R3Q3 ZCCHC6 Terminal uridylyltransferase 7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 945.387 2 945.385114 1888.75568 63216.16 0.68307 0.00064576 -0.24964 -0.000236 0.43343 0.00040976 945.384863509966 949.893472642639 121.45 0.75127 121.45 121.18 121.93 7.6294E-06 357 57 8 0 0 0 1.9874E-08 2 73223 94.569 86.465 4 1.214 1.5249 0 54893000 23672000 31221000 4294 57 2188 2428 7062;7063 7063 70 NSPVDQSDFFYEFSK 15 1 0 Phospho (STY) _NS(ph)PVDQSDFFYEFSK_ NS(0.98)PVDQS(0.019)DFFY(0.001)EFSK NS(17.18)PVDQS(-17.18)DFFY(-29.74)EFS(-40.07)K 0 0 1 0 X6R3Q3;A0A024R235;Q5VYS8 X6R3Q3 X6R3Q3 ZCCHC6 Terminal uridylyltransferase 7 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 949.8965 2 945.385114 1888.75568 63429.41 0.79926 0.0007556 0.71365 0.00067467 1.5129 0.0014303 945.385685665045 949.392883962421 130.1 0.70996 130.1 129.69 130.4 0 433 67 8 0 0 0 0.0032834 1 83841 40.066 33.963 4 0.77467 0.52282 0 26197000 14507000 11690000 4295 57 2188 2428 7064 7064 70 NSQLGIFSSSEK 12 1 0 Phospho (STY) _NSQLGIFS(ph)SSEK_ NSQLGIFS(0.333)S(0.333)S(0.333)EK NS(-47.71)QLGIFS(0)S(0)S(0)EK 0 0 1 0 Q05DQ6;A8K031;O14777 Q05DQ6 Q05DQ6 NDC80;KNTC2 Kinetochore protein NDC80 homolog ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 688.808 2 688.808314 1375.60208 NaN NaN NaN -0.88711 -0.00061105 NaN NaN NaN NaN 91.267 0.14934 91.267 91.221 91.37 -7.6294E-06 0 0 0 0.0024932 2 50428 65.295 43.847 4 NaN NaN 0 3488400 3488400 0 4296 438 2189 2429 7065;7066 7065 761;762;763 NSSAFSYQR 9 0 1 Phospho (STY) _NSS(ph)AFSYQR_ NS(0.311)S(0.689)AFSYQR NS(-3.45)S(3.45)AFS(-50.57)Y(-78.04)QR 0 0 1 0 P42695;E9PKK4;G3V1A9 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 570.2297 2 570.229503 1138.44445 81639.36 0.30575 0.00017435 -0.060559 -3.4533E-05 0.2452 0.00013982 570.229469381168 575.233339683561 51.226 1.5217 51.226 50.391 51.913 0 332 124 4 0 0 0 3.9588E-05 5 21071 99.568 85.411 4 0.84838 0.95015 0 9912600 4782300 5130300 4297 991 2190 2430 7067;7068;7069;7070;7071 7070 1756 NSSISGPFGSR 11 0 1 Phospho (STY) _NSS(ph)ISGPFGSR_ NS(0.165)S(0.832)IS(0.002)GPFGSR NS(-7.02)S(7.02)IS(-26.01)GPFGS(-37.52)R 0 0 1 0 B4DJV5;Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1 B4DJV5 B4DJV5 PWP1 Periodic tryptophan protein 1 homolog MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 594.7567 2 594.755885 1187.49722 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.419 1 71.419 70.919 71.919 -7.6294E-06 0 0 0 0.016367 1 35874 41.401 7.1947 4 4298 198 2191 2431 7072 7072 311 NSSISGPFGSR 11 0 1 Phospho (STY) _NSS(ph)ISGPFGSR_ NS(0.228)S(0.771)ISGPFGSR NS(-5.29)S(5.29)IS(-33.85)GPFGS(-42.03)R 0 0 1 0 B4DJV5;Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1 B4DJV5 B4DJV5 PWP1 Periodic tryptophan protein 1 homolog MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 599.7598 2 594.755885 1187.49722 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.152 1 66.152 65.652 66.652 0 0 0 0 0.0057133 1 41338 49.483 25.229 4 4299 198 2191 2431 7073 7073 311 NSSNTSVGSPSNTIGR 16 0 1 Phospho (STY) _NSSNTSVGS(ph)PSNTIGR_ NSSNT(0.001)S(0.102)VGS(0.786)PS(0.093)NT(0.018)IGR NS(-52.11)S(-42.05)NT(-28.32)S(-8.87)VGS(8.87)PS(-9.28)NT(-16.47)IGR 0 0 1 0 B7Z4J0;B7Z7C4;Q68D09;B7Z2P0;B7Z5R7;B7Z4E5;B7Z7Q8;H0Y5T1;F8WA11;Q7Z460 B7Z4J0 B7Z4J0 DKFZp686D1968;CLASP1 CLIP-associating protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 834.3676 2 829.362505 1656.71046 67292.3 1.0895 0.00090362 -0.2709 -0.00022468 0.81863 0.00067894 829.362434242712 834.366640635502 40.384 0.72909 40.384 39.978 40.707 0 343 68 8 0 0 0 4.5406E-09 1 23345 84.15 68.778 7 1.4128 1.04 0 23888000 8984800 14903000 4300 701 2192 2432 7074 7074 1157 NSSPGEASLLEK 12 1 0 Phospho (STY) _NSS(ph)PGEASLLEK_ NSS(1)PGEASLLEK NS(-33.5)S(33.5)PGEAS(-56.73)LLEK 0 0 1 0 A0A024R250;Q76FK4;A6H8Z4 A0A024R250 A0A024R250 NOL8 Nucleolar protein 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 656.2955 2 656.29504 1310.57553 75452.16 0.73629 0.00048323 0.010003 6.5646E-06 0.7463 0.00048979 656.295113315234 660.302099315252 71.883 1.8218 71.883 70.875 72.697 0 925 163 8 0 0 0 4.0182E-14 5 36180 117.03 99.02 3 1.0635 1.3157 0 271300000 127520000 143770000 4301 59 2193 2433 7075;7076;7077;7078;7079 7078 77 NSSPGEASLLEK 12 1 0 Phospho (STY) _NSS(ph)PGEASLLEK_ NS(0.008)S(0.992)PGEASLLEK NS(-20.94)S(20.94)PGEAS(-57.01)LLEK 0 0 1 0 A0A024R250;Q76FK4;A6H8Z4 A0A024R250 A0A024R250 NOL8 Nucleolar protein 8 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 660.3032 2 656.29504 1310.57553 75167.03 1.2574 0.00082523 0.38552 0.00025302 1.6429 0.0010782 656.295238936887 660.302419248873 69.061 2.4784 69.061 68.023 70.501 0 1335 217 8 0 0 0 0.00026775 4 43504 86.944 79.377 3 1.3855 0.92576 0 201930000 85288000 116650000 4302 59 2193 2433 7080;7081;7082;7083 7082 77 NSSQQDNSSRESPSLEDEETK 21 1 1 Phospho (STY) _NSSQQDNS(ph)SRESPSLEDEETK_ NSSQQDNS(0.328)S(0.328)RES(0.328)PS(0.016)LEDEETK NS(-55.53)S(-35.15)QQDNS(0)S(0)RES(0)PS(-13.15)LEDEET(-43.9)K 0 0 1 1 Q96T23;H0YER1;H0YCN2;Q05DG0 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 822.6755 3 816.332915 2445.97691 66011.3 0.96088 0.0007844 -0.56951 -0.00046491 0.39138 0.00031949 816.666871480608 822.67423774208 47.571 1.4053 47.571 46.801 48.206 -3.8147E-06 708 97 11 0 0 0 2.274E-15 2 18238 79.445 71.258 7 0.55337 0.65873 0 78733000 50830000 27903000 4303 1188 2194 2434 7084;7085 7084 2345;2346;2347 NSSQQDNSSRESPSLEDEETK 21 1 1 Phospho (STY) _NSSQQDNSSRES(ph)PSLEDEETK_ NSSQQDNS(0.221)S(0.15)RES(0.508)PS(0.12)LEDEET(0.001)K NS(-78.51)S(-52.88)QQDNS(-3.62)S(-5.31)RES(3.62)PS(-6.28)LEDEET(-25.56)K 0 0 1 1 Q96T23;H0YER1;H0YCN2;Q05DG0 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 816.6681 3 816.332915 2445.97691 67282.65 1.0831 0.00088419 -0.026264 -2.144E-05 1.0569 0.00086275 816.667127325987 822.340922792955 26.049 0.93784 26.049 25.832 26.77 1.9073E-06 249 47 12 0 0 0 2.6543E-24 1 12131 94.019 87.76 7 1.233 0.95205 0 116580000 53636000 62949000 4304 1188 2194 2434 7086 7086 2345;2346;2347 NSSQQDNSSRESPSLEDEETKK 22 2 1 Phospho (STY) _NSSQQDNSS(ph)RESPSLEDEETKK_ NSSQQDNS(0.124)S(0.408)RES(0.408)PS(0.031)LEDEET(0.029)KK NS(-52.42)S(-34.83)QQDNS(-5.18)S(0)RES(0)PS(-11.13)LEDEET(-11.53)KK 0 0 1 2 Q96T23;H0YER1;H0YCN2;Q05DG0 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 859.3646 3 859.031236 2574.07188 65099.02 0.73504 0.00063143 0.31803 0.0002732 1.0531 0.00090463 859.365753579871 868.044704899757 19.777 0.40236 19.777 19.621 20.023 0 133 18 13 0 0 0 1.9042E-09 1 6691 58.858 40.858 7 1.244 1.0135 0 109420000 48421000 60997000 4305 1188 2195 2435 7087 7087 2345;2346;2347 NSSQQDNSSRESPSLEDEETKKEEETPK 28 3 1 Phospho (STY) _NSSQQDNSSRES(ph)PSLEDEETKKEEETPK_ NSSQQDNS(0.144)S(0.144)RES(0.511)PS(0.144)LEDEET(0.042)KKEEET(0.015)PK NS(-44.53)S(-35.31)QQDNS(-5.51)S(-5.51)RES(5.51)PS(-5.51)LEDEET(-10.81)KKEEET(-15.25)PK 0 0 1 3 Q96T23;H0YER1;H0YCN2;Q05DG0 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 823.3602 4 822.856042 3287.39506 66174.72 0.8412 0.00069218 0.1666 0.00013708 1.0078 0.00082927 823.357844294842 831.61943453491 25.109 0.60717 25.109 24.794 25.402 0 286 30 13 0 0 0 1.7164E-10 1 11350 46.695 38.531 8 1.4357 1.535 0 211940000 81421000 130520000 4306 1188 2196 2436 7088 7088 2345;2346;2347 NSSTETDQQPHSPDSSSSVHSIR 23 0 1 Phospho (STY) _NSSTETDQQPHS(ph)PDSSSSVHSIR_ NSSTET(0.003)DQQPHS(0.951)PDS(0.01)S(0.012)S(0.012)S(0.01)VHS(0.001)IR NS(-61.75)S(-42.76)T(-42.76)ET(-24.96)DQQPHS(18.9)PDS(-19.72)S(-18.9)S(-18.9)S(-19.72)VHS(-31.68)IR 0 0 1 0 A8K5A5;A0A024R1A2;Q92613 A8K5A5 A8K5A5 PHF16;JADE3 Protein Jade-3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 855.3625 3 855.027937 2562.06198 66458.6 0.63286 0.00054112 -0.065336 -5.5864E-05 0.56753 0.00048525 855.362086374489 858.364285288818 59.203 0.61 59.203 59 59.61 0 313 47 10 0 0 0 3.3988E-19 2 26468 83.216 83.216 10 0.50657 0.63881 0 64411000 41290000 23121000 4307 43 2197 2437 7089;7090 7090 52 NSSTETDQQPHSPDSSSSVHSIR 23 0 1 Phospho (STY) _NSSTETDQQPHS(ph)PDSSSSVHSIR_ NSS(0.003)T(0.014)ET(0.148)DQQPHS(0.742)PDS(0.018)S(0.02)S(0.023)S(0.023)VHS(0.009)IR NS(-34.86)S(-24.17)T(-17.38)ET(-7)DQQPHS(7)PDS(-16.22)S(-15.65)S(-15.06)S(-15.06)VHS(-19.26)IR 0 0 1 0 A8K5A5;A0A024R1A2;Q92613 A8K5A5 A8K5A5 PHF16;JADE3 Protein Jade-3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 858.3646 3 855.027937 2562.06198 65819.34 0.33272 0.00028449 0.71253 0.00060923 1.0453 0.00089372 855.362805915766 858.698884743045 23.409 0.87073 23.409 23.095 23.966 0 403 49 12 0 0 0 1.7867E-05 1 9941 40.285 40.285 10 0.90882 0.59763 0 297690000 152940000 144740000 4308 43 2197 2437 7091 7091 52 NSSTIIQNPVETPKK 15 2 0 Phospho (STY) _NSSTIIQNPVET(ph)PKK_ NS(0.001)S(0.002)T(0.002)IIQNPVET(0.995)PKK NS(-32.78)S(-26.78)T(-26.78)IIQNPVET(26.78)PKK 0 0 1 1 P38432 P38432 P38432 COIL Coilin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 876.4495 2 868.434941 1734.85533 67955.78 0.83548 0.00072556 -0.032309 -2.8058E-05 0.80317 0.0006975 868.434805671176 876.449150347447 75.499 0.55824 75.499 75.198 75.756 0 154 46 5 0 0 0 0.0021974 1 38762 45.614 45.614 4 0.69988 0.819 0 22679000 13383000 9296000 4309 987 2198 2438 7092 7092 2884 NSSTIIQNPVETPKK 15 2 0 Phospho (STY) _NSSTIIQNPVET(ph)PKK_ NSSTIIQNPVET(1)PKK NS(-45.25)S(-44.14)T(-43.8)IIQNPVET(43.8)PKK 0 0 1 1 P38432 P38432 P38432 COIL Coilin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 868.9377 2 868.434941 1734.85533 67007.47 1.0327 0.0008968 -0.077097 -6.6954E-05 0.95557 0.00082985 868.434410146838 876.449256199287 65.405 0.99839 65.405 64.766 65.764 0 440 90 7 0 0 0 0.0019477 1 40804 51.03 51.03 4 0.97714 0.78141 0 29318000 14984000 14334000 4310 987 2198 2438 7093 7093 2884 NSSTPGLQVPVSPTVPIQNQK 21 1 0 Phospho (STY) _NSSTPGLQVPVS(ph)PTVPIQNQK_ NSSTPGLQVPVS(0.82)PT(0.179)VPIQNQK NS(-37.57)S(-33.1)T(-33.1)PGLQVPVS(6.62)PT(-6.62)VPIQNQK 0 0 1 0 Q03164;B4E012 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1136.5759 2 1136.07266 2270.13078 58203.69 0.26822 0.00030472 0.0072 8.1797E-06 0.27542 0.0003129 1136.57442702291 1140.58097287567 110.51 0.57205 110.51 110.25 110.83 0 359 48 10 0 0 0 1.5153E-10 1 65089 63.185 63.185 5 0.8357 1.0351 0 153950000 82656000 71295000 4311 1034 2199 2439 7094 7094 1891 NSTECTLILTEGDSAK 16 1 0 Unmodified _NSTECTLILTEGDSAK_ 0 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 869.9135 2 869.911824 1737.80909 68685.23 1.1586 0.0010078 -0.14451 -0.00012571 1.014 0.00088213 870.412440416672 873.919090459258 90.353 0.90765 90.353 89.738 90.646 -7.6294E-06 254 80 5 0 0 0 0.00038101 2 49316 71.879 71.879 1 0.71721 0.90337 0 29619000 15171000 14448000 4312 962 2200 2440 7095;7096 7095 NSTECTLILTEGDSAK 16 1 0 Unmodified _NSTECTLILTEGDSAK_ 0 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 870.4148 2 869.911824 1737.80909 NaN NaN NaN -0.014386 -1.2514E-05 NaN NaN NaN NaN 90.664 0.22624 90.664 90.616 90.842 0 0 0 0 0.0095292 1 49939 52.576 37.31 1 NaN NaN 0 8666500 8666500 0 4313 962 2200 2440 7097 7097 NSTECTLILTEGDSAK 16 1 0 Unmodified _NSTECTLILTEGDSAK_ 0 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 869.9127 2 869.911824 1737.80909 65413.75 0.9145 0.00079553 -0.3128 -0.00027211 0.6017 0.00052343 869.91153085089 873.918855876482 82.93 0.76625 82.93 82.563 83.329 0 447 72 8 0 0 0 7.1654E-06 2 53035 76.262 60.723 1 1.3801 0.90608 0 53874000 22115000 31759000 4314 962 2200 2440 7098;7099 7099 NSYNNSQAPSPGLGSK 16 1 0 Phospho (STY) _NSYNNSQAPS(ph)PGLGSK_ NSYNNSQAPS(0.985)PGLGS(0.015)K NS(-74.32)Y(-74.92)NNS(-41.65)QAPS(18.24)PGLGS(-18.24)K 0 0 1 0 Q9UHB7 Q9UHB7 Q9UHB7 AFF4 AF4/FMR2 family member 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 854.8739 2 850.867423 1699.72029 67024.78 0.44399 0.00037778 0.54299 0.00046201 0.98698 0.00083979 850.867963264837 854.874948547802 51.465 0.86869 51.465 51.071 51.939 3.8147E-06 367 70 7 0 0 0 2.7203E-09 2 20933 87.088 74.802 5 0.69816 0.83483 0 13599000 7962700 5635800 4315 1228 2201 2441 7100;7101 7101 2503 NTDVAQSPEAPKQEAPAK 18 2 0 Phospho (STY) _NTDVAQS(ph)PEAPKQEAPAK_ NTDVAQS(1)PEAPKQEAPAK NT(-37.25)DVAQS(37.25)PEAPKQEAPAK 0 0 1 1 A1A5C4;A0A087WVV2;A0A0A0MRV0;A7BI36;Q9P2E9;V9GY78 A1A5C4 A1A5C4 RRBP1 Ribosome-binding protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 980.9585 2 980.954227 1959.8939 61390.71 0.61027 0.00059865 0.38882 0.00038142 0.99909 0.00098007 980.954586758989 988.96888255778 26.029 0.50599 26.029 25.832 26.338 0 205 27 11 0 0 0 2.3675E-06 2 12092 66.327 66.327 2 1.0345 0.7704 0 140470000 71240000 69231000 4316 256 2202 2442 7102;7103 7103 403 NTDVAQSPEAPKQEAPAK 18 2 0 Phospho (STY) _NTDVAQS(ph)PEAPKQEAPAK_ NTDVAQS(1)PEAPKQEAPAK NT(-65.57)DVAQS(65.57)PEAPKQEAPAK 0 0 1 1 A1A5C4;A0A087WVV2;A0A0A0MRV0;A7BI36;Q9P2E9;V9GY78 A1A5C4 A1A5C4 RRBP1 Ribosome-binding protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 659.6486 3 654.305243 1959.8939 74542.95 1.2437 0.00081374 -0.15909 -0.00010409 1.0846 0.00070965 654.305172651163 659.647915660784 26.018 0.69426 26.018 25.67 26.364 -1.9073E-06 209 38 10 0 0 0 7.8854E-11 2 12091 83.871 69.617 2 1.0469 0.78121 0 120440000 59994000 60445000 4317 256 2202 2442 7104;7105 7104 403 NTDVAQSPEAPKQEAPAKK 19 3 0 Phospho (STY) _NTDVAQS(ph)PEAPKQEAPAKK_ NTDVAQS(1)PEAPKQEAPAKK NT(-54.57)DVAQS(54.57)PEAPKQEAPAKK 0 0 1 2 A1A5C4;A0A087WVV2;A0A0A0MRV0;A7BI36;Q9P2E9;V9GY78 A1A5C4 A1A5C4 RRBP1 Ribosome-binding protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 697.3378 3 697.003564 2087.98886 72624.66 0.78324 0.00054592 0.033045 2.3032E-05 0.81628 0.00056895 697.337809274526 705.017750573033 19.075 0.23713 19.075 18.941 19.178 -1.9073E-06 59 9 9 0 0 0 1.4178E-08 1 6095 66.871 57.341 2 1.125 1.0192 0 17766000 8637000 9129200 4318 256 2203 2443 7106 7106 403 NTETQPTSPQLGTK 14 1 0 Phospho (STY) _NTETQPTS(ph)PQLGTK_ NTETQPT(0.004)S(0.978)PQLGT(0.018)K NT(-92.08)ET(-43.39)QPT(-23.67)S(17.4)PQLGT(-17.4)K 0 0 1 0 Q86X06;A0A024R4V5;Q9Y4Q3;B7Z926;B4DZC2 Q86X06 Q86X06 BRD1;DKFZp434B094 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 795.3708 2 791.361442 1580.70833 65629.92 1.0217 0.00080853 1.2811 0.0010138 2.3028 0.0018223 791.363046265466 795.369619984798 47.412 1.0884 47.412 46.869 47.957 0 436 74 8 0 0 0 3.242E-33 2 18267 139.86 122.38 5 0.69737 0.88436 0 41522000 26297000 15225000 4319 94 2204 2444 7107;7108 7107 124 NTETQPTSPQLGTK 14 1 0 Phospho (STY) _NTETQPTS(ph)PQLGTK_ NTET(0.004)QPT(0.248)S(0.706)PQLGT(0.042)K NT(-38.08)ET(-22.26)QPT(-4.55)S(4.55)PQLGT(-12.3)K 0 0 1 0 Q86X06;A0A024R4V5;Q9Y4Q3;B7Z926;B4DZC2 Q86X06 Q86X06 BRD1;DKFZp434B094 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 791.3619 2 791.361442 1580.70833 67909.4 0.99123 0.00078442 0.30368 0.00024032 1.2949 0.0010247 791.361734546487 795.368746310587 38.151 0.95459 38.151 37.769 38.724 0 526 86 8 0 0 0 0.0032935 2 21737 44.132 37.473 5 1.6082 1.0746 0 187510000 69821000 117690000 4320 94 2204 2444 7109;7110 7110 124 NTHATTHNAYDLEVIDIFK 19 1 0 Unmodified _NTHATTHNAYDLEVIDIFK_ 0 0 0 0 B2R5W3;A0A024R3T8;P09874;B4E0E1 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 735.0344 3 734.699042 2201.0753 69988.53 0.9936 0.00073 0.18499 0.00013592 1.1786 0.00086591 735.033577204259 737.704832978107 127.49 0.32526 127.49 127.33 127.66 7.6294E-06 117 26 5 0 0 0 3.0765E-05 2 82308 48.229 48.229 1 1.2048 0.89696 0 19130000 8956400 10174000 4321 81 2205 2445 7111;7112 7112 NTLQLHR 7 0 1 Unmodified _NTLQLHR_ 0 0 0 0 A0A024R2Q4;P61313;B4DLP4 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 441.2511 2 441.251226 880.487899 92171.77 0.031306 1.3814E-05 0.15335 6.7667E-05 0.18466 8.1481E-05 441.251204193631 446.255391324228 72.432 1.3485 72.432 71.472 72.82 0 397 113 6 0 0 0 0.012177 1 36586 122.79 45.042 1 0.874 1.1066 0 467590000 240200000 227400000 4322 68 2206 2446 7113 7113 NTNAAEESLPEIQK 14 1 0 Phospho (STY) _NTNAAEES(ph)LPEIQK_ NTNAAEES(1)LPEIQK NT(-136.89)NAAEES(136.89)LPEIQK 0 0 1 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 812.3678 2 812.366725 1622.7189 67292.99 0.82105 0.000667 0.062813 5.1027E-05 0.88387 0.00071802 812.366595684418 816.373579740962 74.599 1.0008 74.599 74.059 75.06 -7.6294E-06 459 88 7 0 0 0 3.5564E-62 2 38068 170.77 143.98 2 1.0436 1.3038 0 66598000 33196000 33402000 4323 1220 2207 2447 7114;7115 7115 2468 NTNAAEESLPEIQK 14 1 0 Phospho (STY) _NTNAAEES(ph)LPEIQK_ NTNAAEES(1)LPEIQK NT(-88.89)NAAEES(88.89)LPEIQK 0 0 1 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 812.3685 2 812.366725 1622.7189 67719.6 1.1203 0.00091013 0.29989 0.00024362 1.4202 0.0011538 812.366788749897 816.373987491851 75.517 1.3376 75.517 74.896 76.234 0 630 116 10 0 0 0 1.2793E-08 2 47845 99.344 88.239 2 2.3982 1.5939 0 87207000 24836000 62370000 4324 1220 2207 2447 7116;7117 7117 2468 NTPSQHSHSIQHSPER 16 0 1 Phospho (STY) _NTPSQHSHSIQHS(ph)PER_ NTPSQHS(0.003)HS(0.032)IQHS(0.965)PER NT(-56.52)PS(-42.14)QHS(-25.16)HS(-14.76)IQHS(14.76)PER 0 0 1 0 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09;E9PJA7 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 483.715 4 481.212977 1920.8228 86546.27 0.34629 0.00016664 -0.052037 -2.5041E-05 0.29426 0.0001416 481.463718359334 483.715087066586 64.701 0.56529 64.701 64.473 65.038 0 270 41 10 0 0 0 7.875E-07 1 30776 72.883 72.883 5 1.0369 1.3124 0 387920000 194240000 193690000 4325 809 2208 2448 7118 7118 1398 NTPSQHSHSIQHSPER 16 0 1 Phospho (STY) _NTPSQHSHSIQHS(ph)PER_ NTPSQHSHS(0.004)IQHS(0.996)PER NT(-125.77)PS(-95.17)QHS(-48.57)HS(-23.47)IQHS(23.47)PER 0 0 1 0 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09;E9PJA7 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 641.6166 3 641.281543 1920.8228 75127.54 0.83423 0.00053498 0.45279 0.00029037 1.287 0.00082534 641.281584548783 644.618378687612 64.662 0.50972 64.662 64.372 64.882 0 191 38 8 0 0 0 2.083E-43 2 30844 142.85 137.64 5 1.2038 1.5208 0 137780000 62503000 75280000 4326 809 2208 2448 7119;7120 7120 1398 NTPSQHSHSIQHSPER 16 0 1 Phospho (STY) _NTPSQHSHSIQHS(ph)PER_ NTPSQHSHSIQHS(1)PER NT(-132.07)PS(-89.23)QHS(-55.56)HS(-37.28)IQHS(37.28)PER 0 0 1 0 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09;E9PJA7 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 641.2817 3 641.281543 1920.8228 74600.17 0.58329 0.00037405 -0.58338 -0.00037411 -8.9462E-05 -5.737E-08 641.281363932575 644.617107347239 14.721 0.32193 14.721 14.639 14.961 0 38 9 8 0 0 0 8.1639E-52 2 2461 154.65 130.64 5 0.94054 0.62714 0 149170000 72697000 76473000 4327 809 2208 2448 7121;7122 7121 1398 NTPSQHSHSIQHSPER 16 0 1 Phospho (STY) _NTPSQHSHSIQHS(ph)PER_ NTPSQHSHSIQHS(1)PER NT(-116.95)PS(-95.73)QHS(-65.83)HS(-48.38)IQHS(48.38)PER 0 0 1 0 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09;E9PJA7 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 961.9199 2 961.418677 1920.8228 61428.16 0.2266 0.00021785 -0.67606 -0.00064998 -0.44947 -0.00043212 961.418506056089 966.422570798945 14.729 0.30874 14.729 14.653 14.961 0 32 8 8 0 0 0 3.3717E-44 2 2468 147.49 126.03 5 0.93306 0.65786 0 31896000 16082000 15813000 4328 809 2208 2448 7123;7124 7123 1398 NTPSQHSHSIQHSPER 16 0 1 Phospho (STY) _NTPSQHSHSIQHS(ph)PER_ NTPSQHSHS(0.001)IQHS(0.999)PER NT(-72.1)PS(-63.73)QHS(-35.3)HS(-31.36)IQHS(31.36)PER 0 0 1 0 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09;E9PJA7 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 483.7149 4 481.212977 1920.8228 85818 0.16965 8.1637E-05 -0.35243 -0.00016959 -0.18278 -8.7956E-05 481.212897746288 483.965587315526 14.721 0.21381 14.721 14.653 14.866 0 23 6 6 0 0 0 4.2607E-07 1 2475 77.1 69.526 5 1.0203 0.76846 0 20313000 9713100 10600000 4329 809 2208 2448 7125 7125 1398 NTQIELQSSPDVQNSLLEDK 20 1 0 Phospho (STY) _NTQIELQSS(ph)PDVQNSLLEDK_ NTQIELQS(0.162)S(0.838)PDVQNSLLEDK NT(-86.96)QIELQS(-7.15)S(7.15)PDVQNS(-43.82)LLEDK 0 0 1 0 Q9UK61;A0A024R363;A0A087X0F1 Q9UK61 Q9UK61 FAM208A;C3orf63 Protein FAM208A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1174.0547 2 1169.54413 2337.07372 58478.74 0.35684 0.00041734 -0.29623 -0.00034645 0.060617 7.0894E-05 1169.54292221345 1174.05295648785 107.6 0.52501 107.6 107.32 107.84 0 160 39 6 0 0 0 2.5828E-47 1 62912 136.26 129.57 4 1.164 1.4635 0 28756000 12234000 16522000 4330 1234 2209 2449 7126 7126 2522 NTSGLPAEPESVSSPPTLHMK 21 1 0 Oxidation (M),Phospho (STY) _NTSGLPAEPESVS(ph)SPPTLHM(ox)K_ NTSGLPAEPESVSSPPTLHM(1)K NTSGLPAEPES(0.155)VS(0.416)S(0.416)PPT(0.013)LHMK NTSGLPAEPESVSSPPTLHM(51.17)K NT(-45.56)S(-38.67)GLPAEPES(-4.29)VS(0)S(0)PPT(-15.13)LHMK 0 1 1 0 B9EGR5;Q8IWI9 B9EGR5 B9EGR5 MGA MAX gene-associated protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 759.0164 3 759.015253 2274.02393 70038.91 0.76474 0.00058045 0.12333 9.3606E-05 0.88807 0.00067406 759.349863227852 761.686787078866 87.782 1.0246 87.782 87.285 88.31 0 493 92 8 0 0 0 4.6211E-06 1 48038 51.166 51.166 6 0.80062 1.0013 0 63989000 35098000 28891000 4331 732 2210 2450 7127 7127 192 1223;1224 NTSIGEEFISTEDVELEEAIRR 22 0 2 Phospho (STY) _NTS(ph)IGEEFISTEDVELEEAIRR_ NT(0.01)S(0.99)IGEEFISTEDVELEEAIRR NT(-19.92)S(19.92)IGEEFIS(-69.86)T(-74.84)EDVELEEAIRR 0 0 1 1 Q96JY2;Q9Y4E5 Q96JY2 Q96JY2 ZNF451 Zinc finger protein 451 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 873.4082 3 873.072484 2616.19562 64368.55 0.57483 0.00050186 0.4722 0.00041226 1.047 0.00091413 873.406996069654 879.74519398692 133.23 0.15779 133.23 133.16 133.32 0 73 11 10 0 0 0 9.0885E-30 2 81060 102.27 102.27 4 0.66724 0.82903 0 63575000 37139000 26437000 4332 1181 2211 2451 7128;7129 7129 2329 NTSTVVSPSLLEK 13 1 0 Phospho (STY) _NTSTVVS(ph)PSLLEK_ NTSTVVS(0.798)PS(0.201)LLEK NT(-60.95)S(-33.61)T(-36.18)VVS(5.98)PS(-5.98)LLEK 0 0 1 0 B5MCT9;Q08AL9;E7EPP7;Q6ZWJ1 B5MCT9 B5MCT9 STXBP4 Syntaxin-binding protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 731.8688 2 727.860547 1453.70654 73283.43 1.5268 0.0011113 -0.31599 -0.00022999 1.2109 0.00088133 727.860808916458 731.867473328274 102.35 0.63802 102.35 101.97 102.61 0 149 49 5 0 0 0 1.8595E-14 4 58888 115.82 94.946 5 1.9658 2.3709 0 16610000 6766900 9842700 4333 694 2212 2452 7130;7131;7132;7133 7131 1142 NVAEALGHSPK 11 1 0 Phospho (STY) _NVAEALGHS(ph)PK_ NVAEALGHS(1)PK NVAEALGHS(67.02)PK 0 0 1 0 B2RCD8;Q8IU81 B2RCD8 B2RCD8 IRF2BP1 Interferon regulatory factor 2-binding protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 605.79 2 601.781902 1201.54925 80155.2 0.8599 0.00051747 0.010528 6.3353E-06 0.87042 0.00052381 601.781636739493 605.789089939593 29.724 0.58834 29.724 29.454 30.043 0 195 40 6 0 0 0 0.0052351 3 15230 67.019 40.635 1 1.1806 0.91184 0 12499000 5518700 6980500 4334 553 2213 2453 7134;7135;7136 7134 918 NVGNLAARPPPSGDR 15 0 2 Phospho (STY) _NVGNLAARPPPS(ph)GDR_ NVGNLAARPPPS(1)GDR NVGNLAARPPPS(51.5)GDR 0 0 1 1 Q9NS39 Q9NS39 Q9NS39 ADARB2 Double-stranded RNA-specific editase B2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 540.9314 3 534.257899 1599.75187 NaN NaN NaN -0.2177 -0.00011631 NaN NaN NaN NaN 61.471 0.51159 61.471 61.235 61.747 0 0 0 0 0.00031554 1 28353 51.495 35.002 1 NaN NaN 0 9368300 0 9368300 4335 1217 2214 2454 7137 7137 2449 NVHSEDFENR 10 0 1 Phospho (STY) _NVHS(ph)EDFENR_ NVHS(1)EDFENR NVHS(122.34)EDFENR 0 0 1 0 Q6DHZ8;B2RBM8;Q9H2P0;E9PQK8 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 668.7639 2 663.759156 1325.50376 74153.84 0.66903 0.00044407 0.10601 7.0367E-05 0.77504 0.00051444 663.759281622159 668.763358471586 50.876 1.683 50.876 50.279 51.962 0 812 138 10 0 0 0 2.3217E-07 4 20931 122.34 110.3 1 0.59654 0.75421 0 211700000 134820000 76880000 4336 552 2215 2455 7138;7139;7140;7141 7141 914 NVHSEDFENR 10 0 1 Phospho (STY) _NVHS(ph)EDFENR_ NVHS(1)EDFENR NVHS(57.17)EDFENR 0 0 1 0 Q6DHZ8;B2RBM8;Q9H2P0;E9PQK8 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 442.8419 3 442.841863 1325.50376 89999.09 -0.10529 -4.6629E-05 0.066453 2.9428E-05 -0.038841 -1.7201E-05 442.84188425081 446.177974934963 50.914 1.3678 50.914 50.316 51.684 0 602 115 8 0 0 0 0.0038235 2 20835 57.175 47.17 1 0.59453 0.75047 0 86371000 53002000 33369000 4337 552 2215 2455 7142;7143 7143 914 NVHSEDFENR 10 0 1 Unmodified _NVHSEDFENR_ 0 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0;E9PQK8 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 623.7762 2 623.77599 1245.53743 76974.31 0.56794 0.00035426 -0.18102 -0.00011292 0.38691 0.00024135 623.775811333757 628.780098376872 66.749 0.22919 66.749 66.626 66.856 0 57 15 5 0 0 0 9.5015E-07 1 32607 120.76 103.64 1 0.80125 1.0012 0 39272000 21829000 17443000 4338 552 2215 2456 7144 7144 NVLVPLSR 8 0 1 Phospho (STY) _NVLVPLS(ph)R_ NVLVPLS(1)R NVLVPLS(60.52)R 0 0 1 0 B7Z4V7;Q2TB10;A0A087WXB4 B7Z4V7 B7Z4V7 ZNF800 Zinc finger protein 800 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 494.267 2 489.262617 976.510682 90394.64 0.49577 0.00024256 -0.17556 -8.5895E-05 0.32021 0.00015667 489.262463011752 494.26671254964 96.212 0.58408 96.212 95.928 96.512 -7.6294E-06 137 57 4 0 0 0 0.012442 2 61823 60.518 16.315 1 1.0419 0.84331 0 7223500 3675500 3547900 4339 705 2216 2457 7145;7146 7145 1167 NVQALEIELQSQLALK 16 1 0 Unmodified _NVQALEIELQSQLALK_ 0 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 899.0101 2 899.009458 1796.00436 NaN NaN NaN -0.21724 -0.00019531 NaN NaN NaN NaN 133.34 0.095398 133.34 133.29 133.39 0 0 0 0 1.9333E-272 1 81149 232.42 193.15 1 NaN NaN 0 10108000 10108000 0 + 4340 755 2217 2458 7147 7147 NVQDAIADAEQR 12 0 1 Unmodified _NVQDAIADAEQR_ 0 0 0 0 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 665.3246 2 665.323305 1328.63206 NaN NaN NaN 0.029803 1.9829E-05 NaN NaN NaN NaN 60.708 1.8845 60.708 59.689 61.573 0 0 0 0 5.0899E-10 2 37233 101.79 61.741 1 NaN NaN 0 13535000 13535000 0 + 4341 758 2218 2459 7148;7149 7148 NVSSFPDDATSPLQENR 17 0 1 Phospho (STY) _NVSSFPDDATS(ph)PLQENR_ NVSSFPDDAT(0.007)S(0.993)PLQENR NVS(-100.43)S(-84.24)FPDDAT(-21.34)S(21.34)PLQENR 0 0 1 0 Q7Z726;A8K7D9;P52292;J3QLL0;J3KS65 Q7Z726 Q7Z726 KPNA2 Importin subunit alpha;Importin subunit alpha-1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 978.9207 2 978.920384 1955.82621 61716.5 0.48102 0.00047088 0.063891 6.2544E-05 0.54492 0.00053343 978.92047371576 983.924411169941 87.642 2.0258 87.642 86.872 88.898 0 1364 185 10 0 0 0 2.2398E-61 5 47693 160.64 146.97 4 0.68518 0.86757 0 488850000 290350000 198510000 4342 488 2219 2460 7150;7151;7152;7153;7154 7151 843;2752 NVSSFPDDATSPLQENR 17 0 1 Phospho (STY) _NVSSFPDDAT(ph)SPLQENR_ NVS(0.012)S(0.012)FPDDAT(0.488)S(0.488)PLQENR NVS(-16)S(-16)FPDDAT(0)S(0)PLQENR 0 0 1 0 Q7Z726;A8K7D9;P52292;J3QLL0;J3KS65 Q7Z726 Q7Z726 KPNA2 Importin subunit alpha;Importin subunit alpha-1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 979.4217 2 978.920384 1955.82621 NaN NaN NaN 0.10713 0.00010487 NaN NaN NaN NaN 89.051 0.21386 89.051 89.003 89.217 0 0 0 0 0.00023109 1 48734 50.305 35.615 4 NaN NaN 0 4140400 4140400 0 4343 488 2219 2460 7155 7155 843;2752 NVSSFPDDATSPLQENR 17 0 1 Phospho (STY) _NVSSFPDDATS(ph)PLQENR_ NVSSFPDDAT(0.073)S(0.927)PLQENR NVS(-65.92)S(-54.2)FPDDAT(-11.06)S(11.06)PLQENR 0 0 1 0 Q7Z726;A8K7D9;P52292;J3QLL0;J3KS65 Q7Z726 Q7Z726 KPNA2 Importin subunit alpha;Importin subunit alpha-1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 978.9218 2 978.920384 1955.82621 61282.57 0.55159 0.00053997 0.45066 0.00044116 1.0023 0.00098113 978.921187124344 983.924971130344 92.222 2.7824 92.222 91.266 94.048 0 1990 272 12 0 0 0 5.7942E-37 3 59548 133.52 116.44 4 0.58731 0.37646 0 1061200000 665790000 395370000 4344 488 2219 2460 7156;7157;7158 7158 843;2752 NVVDSSQKPTPSAR 14 1 1 Phospho (STY) _NVVDS(ph)SQKPTPSAR_ NVVDS(0.749)S(0.25)QKPT(0.001)PSAR NVVDS(4.77)S(-4.77)QKPT(-30.32)PS(-35.64)AR 0 0 1 1 Q03164;E9PR05;B3W6H7;Q8N6B4;Q1HA41 Q03164 Q03164 KMT2A;TET1-MLL;MLL/CALM fusion;MLL-MAML2 Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 792.3826 2 783.369602 1564.72465 NaN NaN NaN 0.80684 0.00063205 NaN NaN NaN NaN 23.192 0.2905 23.192 23.029 23.319 0 0 0 0 0.00089878 1 9692 62.469 35.331 4 NaN NaN 0 8681000 0 8681000 4345 1034 2220 2461 7159 7159 1892 NWPFLEGCACTPER 14 0 1 Phospho (STY) _NWPFLEGCACT(ph)PER_ NWPFLEGCACT(1)PER NWPFLEGCACT(74.77)PER 0 0 1 0 A3E0Z4;A3E0Z6;A3E0Z7;A3E0Z8;B7Z7B9;A3E0Z5;E7CU85;A0A0B4J1S3;H3BLT4;O15392 A3E0Z4 A3E0Z4 BIRC5 Baculoviral IAP repeat-containing protein 5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 913.8672 2 908.862772 1815.71099 64179.25 0.8814 0.00080107 -0.51728 -0.00047014 0.36411 0.00033093 908.862030658404 913.866796981223 117.97 0.75241 117.97 117.54 118.29 0 421 66 8 0 0 0 0.0013079 1 70520 74.769 56.852 1 1.0361 1.3022 0 42729000 20393000 22336000 4346 307 2221 2462 7160 7160 2685 NWTEDMEGGISSPVK 15 1 0 Oxidation (M),Phospho (STY) _NWTEDM(ox)EGGISS(ph)PVK_ NWTEDM(1)EGGISSPVK NWTEDMEGGIS(0.185)S(0.815)PVK NWTEDM(99.93)EGGISSPVK NWT(-69.36)EDMEGGIS(-6.45)S(6.45)PVK 0 1 1 0 Q6FI30;P08651 Q6FI30 Q6FI30 NFIC Nuclear factor 1;Nuclear factor 1 C-type MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 873.3597 2 873.358042 1744.70153 63974.72 0.74174 0.0006478 -0.10682 -9.329E-05 0.63492 0.00055451 873.357955085466 877.365634009827 76.573 1.0205 76.573 76.053 77.074 -7.6294E-06 386 88 6 0 0 0 2.572E-09 3 40012 99.927 79.264 3 0.80692 1.0109 0 60259000 33390000 26869000 4347 959 2222 2463 7161;7162;7163 7162 262 1679 NYEDEDSLK 9 1 0 Unmodified _NYEDEDSLK_ 0 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 556.7407 2 556.740751 1111.46695 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.649 1 54.649 54.149 55.149 3.8147E-06 0 0 0 0.0075762 1 23180 58.433 32.696 1 4348 962 2223 2464 7164 7164 NYQSQADIPIRSPFGIVK 18 1 1 Phospho (STY) _NYQSQADIPIRS(ph)PFGIVK_ NYQS(0.008)QADIPIRS(0.992)PFGIVK NY(-52.64)QS(-20.97)QADIPIRS(20.97)PFGIVK 0 0 1 1 Q14966;D6W5H1;A8K583;A0A096LPH6;B4DF54 Q14966 Q14966 ZNF638 Zinc finger protein 638 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 705.0215 3 705.020778 2112.0405 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.49 1 118.49 117.99 118.99 0 0 0 0 0.00020137 1 71106 57.496 50.377 3 4349 1066 2224 2465 7165 7165 2007 NYSPYYNTIDDLK 13 1 0 Unmodified _NYSPYYNTIDDLK_ 0 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 803.3752 2 803.375203 1604.73585 NaN NaN NaN 0.25103 0.00020167 NaN NaN NaN NaN 102.83 1.0472 102.83 102.31 103.36 0 0 0 0 1.3816E-23 2 59125 118.28 96.815 1 NaN NaN 0 11022000 11022000 0 + 4350 757 2225 2466 7166;7167 7166 NYSPYYNTIDDLK 13 1 0 Unmodified _NYSPYYNTIDDLK_ 0 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 803.3765 2 803.375203 1604.73585 NaN NaN NaN -0.3033 -0.00024366 NaN NaN NaN NaN 100.07 0.84392 100.07 99.537 100.38 7.6294E-06 0 0 0 0.0014753 1 64194 59.198 40.418 1 NaN NaN 0 4978500 4978500 0 + 4351 757 2225 2466 7168 7168 PAASLAVHTDK 11 1 0 Unmodified _PAASLAVHTDK_ 0 0 0 0 B4DJV5;Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1 B4DJV5 B4DJV5 PWP1 Periodic tryptophan protein 1 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 373.2082 3 370.536501 1108.58767 103474.8 0.028046 1.0392E-05 0.34671 0.00012847 0.37475 0.00013886 370.536662760125 373.207964931078 67.71 0.36602 67.71 67.531 67.897 0 73 30 4 0 0 0 0.034449 1 33340 23.711 23.711 1 1.0226 1.2137 0 11111000 5161000 5950100 4352 198 2226 2467 7169 7169 PAASSPETPSAGQQEAK 17 1 0 Phospho (STY) _PAASS(ph)PETPSAGQQEAK_ PAAS(0.143)S(0.856)PET(0.001)PSAGQQEAK PAAS(-7.76)S(7.76)PET(-29.79)PS(-33.05)AGQQEAK 0 0 1 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 868.38 2 868.380363 1734.74617 66261.43 0.85393 0.00074154 0.12241 0.0001063 0.97634 0.00084783 868.380287308597 872.387627485383 33.444 1.0052 33.444 32.944 33.949 3.8147E-06 610 95 9 0 0 0 0.00013299 2 10823 51.147 41.825 4 1.1171 1.3252 0 10175000 4805600 5369800 4353 1212 2227 2468 7170;7171 7170 2430;2431 PAASSPETPSAGQQEAK 17 1 0 Phospho (STY) _PAAS(ph)SPETPSAGQQEAK_ PAAS(0.525)S(0.472)PET(0.003)PS(0.001)AGQQEAK PAAS(0.46)S(-0.46)PET(-22.81)PS(-28.73)AGQQEAK 0 0 1 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 872.8885 2 868.380363 1734.74617 65561.14 0.20495 0.00017798 0.65201 0.00056619 0.85697 0.00074417 868.381105558757 872.388018715055 23.251 0.51091 23.251 23.029 23.539 0 149 27 9 0 0 0 0.00074969 1 9683 41.871 36.211 4 2.0996 1.3799 0 55469000 16623000 38845000 4354 1212 2227 2468 7172 7172 2430;2431 PAEEQLDVGQSK 12 1 0 Phospho (STY) _PAEEQLDVGQS(ph)K_ PAEEQLDVGQS(1)K PAEEQLDVGQS(115.91)K 0 0 1 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 690.8047 2 690.805771 1379.59699 NaN NaN NaN -0.37393 -0.00025832 NaN NaN NaN NaN 53.28 0.73201 53.28 52.81 53.542 0 0 0 0 3.0458E-23 1 22216 115.91 91.656 1 NaN NaN 0 5964500 5964500 0 4355 1035 2228 2469 7173 7173 1918 PAETPVATSPTATDSTSGDSSR 22 0 1 Phospho (STY) _PAETPVATS(ph)PTATDSTSGDSSR_ PAETPVAT(0.008)S(0.937)PT(0.038)AT(0.015)DS(0.001)TSGDSSR PAET(-86.92)PVAT(-20.65)S(13.88)PT(-13.88)AT(-17.84)DS(-30.35)T(-36.54)S(-39.22)GDS(-54.28)S(-54.28)R 0 0 1 0 H0Y579;B7ZA74;B7Z4W4;B4DEA3;Q53F10;P54727 H0Y579 H0Y579 RAD23B UV excision repair protein RAD23 homolog B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1108.4756 2 1107.97354 2213.93253 58419.11 0.13297 0.00014733 0.33845 0.00037499 0.47142 0.00052232 1108.4753708152 1112.97808650682 52.94 1.3747 52.94 52.275 53.65 0 842 113 11 0 0 0 6.7281E-67 3 22155 139.11 137.89 10 0.67996 0.8593 0 164570000 97626000 66943000 4356 617 2229 2470 7174;7175;7176 7175 1019 PAETPVATSPTATDSTSGDSSR 22 0 1 Phospho (STY) _PAETPVATS(ph)PTATDSTSGDSSR_ PAETPVAT(0.163)S(0.739)PT(0.068)AT(0.022)DS(0.004)T(0.001)S(0.002)GDSSR PAET(-48.57)PVAT(-6.56)S(6.56)PT(-10.38)AT(-15.28)DS(-22.34)T(-28.18)S(-26.91)GDS(-32.68)S(-32.68)R 0 0 1 0 H0Y579;B7ZA74;B7Z4W4;B4DEA3;Q53F10;P54727 H0Y579 H0Y579 RAD23B UV excision repair protein RAD23 homolog B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1108.4764 2 1107.97354 2213.93253 58133.74 0.54042 0.00059878 0.088581 9.8145E-05 0.629 0.00069692 1108.47518941764 1113.47909840063 49.236 2.0706 49.236 48.569 50.639 0 1566 199 13 0 0 0 2.6299E-15 3 29838 80.362 80.362 10 0.97571 0.63416 0 532120000 270880000 261240000 4357 617 2229 2470 7177;7178;7179 7178 1019 PAGLADFGPSSASSPLSSPLSK 22 1 0 2 Phospho (STY) _PAGLADFGPSSASS(ph)PLSS(ph)PLSK_ PAGLADFGPS(0.075)S(0.085)AS(0.378)S(0.463)PLS(0.391)S(0.574)PLS(0.033)K PAGLADFGPS(-7.67)S(-7.67)AS(-0.89)S(0.89)PLS(-2.45)S(2.45)PLS(-12.53)K 0 0 2 0 Q9NUK2;A0A024R9R7;Q9ULG1 Q9NUK2 Q9NUK2 INOC1;INO80 DNA helicase INO80 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1117.4939 2 1116.99491 2231.97526 56550.32 0.34947 0.00039036 -0.1608 -0.00017962 0.18867 0.00021074 1117.49596614007 1121.00210334888 121.98 0.86688 121.98 121.6 122.46 -7.6294E-06 413 63 10 0 0 0 1.9114E-13 2 73563 71.872 71.872 21 0.75877 0.94322 0 88032000 49315000 38717000 4358 173 2230 2471 7180;7181 7181 272;273 PANKQSPSPSEVSQSPGR 18 1 1 Phospho (STY) _PANKQS(ph)PSPSEVSQSPGR_ PANKQS(0.667)PS(0.329)PS(0.005)EVSQSPGR PANKQS(3.07)PS(-3.07)PS(-21.65)EVS(-38.53)QS(-47.31)PGR 0 0 1 1 P55201;C9JDK5;C9JHC0 P55201 P55201 BRPF1 Peregrin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 650.9736 3 644.965221 1931.87383 76803.35 0.88916 0.00057348 -0.22263 -0.00014359 0.66653 0.00042989 644.964621561344 650.972776300568 44.741 0.73635 44.741 44.356 45.093 0 336 53 8 0 0 0 2.5266E-06 1 16539 57.293 57.293 5 0.94441 1.0279 0 8573800 4321700 4252100 4359 1009 2231 2472 7182 7182 1839 PAPLLESPFK 10 1 0 Phospho (STY) _PAPLLES(ph)PFK_ PAPLLES(1)PFK PAPLLES(79.82)PFK 0 0 1 0 B4E0B2;Q3MNE1;A0A0S2Z4Z4;A8K586;A0A0S2Z5J4;O00203 B4E0B2 B4E0B2 AP3B1 AP-3 complex subunit beta;AP-3 complex subunit beta-1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 589.7974 2 589.79649 1177.57843 81244.66 0.64952 0.00038308 -0.020074 -1.1839E-05 0.62944 0.00037124 589.796537108724 593.803628939843 110.91 0.70485 110.91 110.5 111.2 0 147 59 4 0 0 0 0.0011383 2 65579 79.82 65.151 1 0.91676 1.0876 0 10251000 6467800 3783100 4360 355 2232 2473 7183;7184 7184 561 PAPLVQQLSPSLLPNSK 17 1 0 Phospho (STY) _PAPLVQQLS(ph)PSLLPNSK_ PAPLVQQLS(0.84)PS(0.16)LLPNSK PAPLVQQLS(7.19)PS(-7.19)LLPNS(-42.24)K 0 0 1 0 Q9Y6X9 Q9Y6X9 Q9Y6X9 MORC2 MORC family CW-type zinc finger protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 939.0064 2 934.997709 1867.98086 65813.44 0.7829 0.00073201 0.037778 3.5322E-05 0.82068 0.00076734 934.997721480647 939.004972911388 119.51 0.46918 119.51 119.35 119.82 7.6294E-06 165 39 7 0 0 0 2.305E-05 2 71823 68.536 56.872 3 0.56132 0.66745 0 11684000 7645000 4038500 4361 1257 2233 2474 7185;7186 7185 2593 PAPPKPEPR 9 1 1 Unmodified _PAPPKPEPR_ 0 0 0 1 A0A024R046;O00479 A0A024R046 A0A024R046 HMGN4 High mobility group nucleosome-binding domain-containing protein 4 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 330.1909 3 330.190665 987.550165 NaN NaN NaN 0.41779 0.00013795 NaN NaN NaN NaN 59.02 1.0355 59.02 58.606 59.642 0 0 0 0 0.00026921 2 26713 82.279 68.122 1 NaN NaN 0 35133000 35133000 0 4362 23 2234 2475 7187;7188 7188 PAPPPQSQSPEVEQLGR 17 0 1 Phospho (STY) _PAPPPQS(ph)QSPEVEQLGR_ PAPPPQS(0.575)QS(0.425)PEVEQLGR PAPPPQS(1.31)QS(-1.31)PEVEQLGR 0 0 1 0 A0A024RCC4;P52948 A0A024RCC4 A0A024RCC4 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 954.451 2 948.946205 1895.87786 NaN NaN NaN -0.31437 -0.00029832 NaN NaN NaN NaN 69.781 1.1307 69.781 69.275 70.406 0 0 0 0 1.4866E-06 1 34995 68.919 35.511 2 NaN NaN 0 27822000 0 27822000 4363 209 2235 2476 7189 7189 325 PAPPQHFSPR 10 0 1 Phospho (STY) _PAPPQHFS(ph)PR_ PAPPQHFS(1)PR PAPPQHFS(41.4)PR 0 0 1 0 A0A075B784;A0A024R8V6;Q9P275;B3KMW2 A0A075B784 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 408.5255 3 405.188645 1212.54411 94918.52 -0.27819 -0.00011272 0.19558 7.9249E-05 -0.082601 -3.3469E-05 405.188540404117 408.524960476448 57.874 0.87554 57.874 57.46 58.335 3.8147E-06 230 70 4 0 0 0 0.010032 1 25365 41.401 35.168 1 0.93091 1.1026 0 14754000 7793400 6960700 4364 157 2236 2477 7190 7190 247 PAPVSPESVK 10 1 0 Phospho (STY) _PAPVS(ph)PESVK_ PAPVS(0.878)PES(0.122)VK PAPVS(8.56)PES(-8.56)VK 0 0 1 0 Q96JM3 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 545.7628 2 545.762647 1089.51074 NaN NaN NaN -0.42977 -0.00023455 NaN NaN NaN NaN 54.412 1.072 54.412 53.945 55.017 0 0 0 0 0.0012161 1 23037 70.728 45.292 2 NaN NaN 0 7698400 7698400 0 4365 1180 2237 2478 7191 7191 2325 PASSSLPSSPPPQLLTR 17 0 1 Phospho (STY) _PASSSLPS(ph)SPPPQLLTR_ PAS(0.049)S(0.049)S(0.009)LPS(0.422)S(0.422)PPPQLLT(0.049)R PAS(-9.32)S(-9.32)S(-16.8)LPS(0)S(0)PPPQLLT(-9.32)R 0 0 1 0 B7Z5I6;Q99567;I3L2W3 B7Z5I6 B7Z5I6 NUP88 Nuclear pore complex protein Nup88 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 912.9597 2 907.956041 1813.89753 65953.08 1.4486 0.0013153 -0.60527 -0.00054956 0.84334 0.00076571 908.456473210421 912.960504518234 101.83 0.76169 101.83 101.55 102.31 0 138 63 4 0 0 0 0.003031 1 58439 40.278 24.738 6 1.1401 1.3481 0 14416000 5708000 8708000 4366 708 2238 2479 7192 7192 1175;1176 PASVPPSPSLSR 12 0 1 Phospho (STY) _PASVPPS(ph)PSLSR_ PASVPPS(0.8)PS(0.1)LS(0.1)R PAS(-33.56)VPPS(9.04)PS(-9.04)LS(-9.04)R 0 0 1 0 B7Z255;B7Z806;B7Z6I6;Q53ER0;A8K6K7;P13807 B7Z255 B7Z255 GYS1 Glycogen [starch] synthase, muscle ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 637.8118 2 637.81066 1273.60677 NaN NaN NaN 0.30011 0.00019141 NaN NaN NaN NaN 60.6 0.26076 60.6 60.459 60.72 -3.8147E-06 0 0 0 0.0022061 1 37560 70.412 46.983 4 NaN NaN 0 4980300 4980300 0 4367 481 2239 2480 7193 7193 832;833 PASVPPSPSLSR 12 0 1 Phospho (STY) _PASVPPS(ph)PSLSR_ PAS(0.001)VPPS(0.621)PS(0.189)LS(0.189)R PAS(-27.18)VPPS(5.17)PS(-5.17)LS(-5.17)R 0 0 1 0 B7Z255;B7Z806;B7Z6I6;Q53ER0;A8K6K7;P13807 B7Z255 B7Z255 GYS1 Glycogen [starch] synthase, muscle ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 638.3126 2 637.81066 1273.60677 NaN NaN NaN -0.52136 -0.00033253 NaN NaN NaN NaN 62.687 0.27499 62.687 62.621 62.896 0 0 0 0 0.016797 1 38994 40.767 16.424 4 NaN NaN 0 2055600 2055600 0 4368 481 2239 2480 7194 7194 832;833 PASVSSPEPPK 11 1 0 Phospho (STY) _PASVS(ph)SPEPPK_ PAS(0.22)VS(0.39)S(0.39)PEPPK PAS(-2.49)VS(0)S(0)PEPPK 0 0 1 0 Q96JM3 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 588.2712 2 588.270836 1174.52712 82359.31 0.68798 0.00040472 -0.0098043 -5.7676E-06 0.67818 0.00039895 588.270847381806 592.277899554502 42.337 0.69381 42.337 42 42.694 0 152 54 4 0 0 0 0.021502 1 15296 40.724 24.184 3 0.56554 0.64801 0 1719000 1103900 615150 4369 1180 2240 2481 7195 7195 2326;2327 PEELHSMLMCK 11 1 0 Phospho (STY) _PEELHS(ph)MLMCK_ PEELHS(1)MLMCK PEELHS(63.41)MLMCK 0 0 1 0 REV__B3KN03 REV__B3KN03 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 727.8009 2 727.797523 1453.58049 70996.27 0.6173 0.00044927 4.1104 0.0029915 4.7277 0.0034408 727.800508601409 731.80751573535 51.169 2.2011 51.169 50.438 52.639 3.8147E-06 852 177 8 0 0 0 0.007164 3 20510 63.408 51.018 1 0.61971 0.76923 0 106060000 64878000 41183000 + 4370 1265 2241 2482 7196;7197;7198 7196 2600 PEELHSMLMCK 11 1 0 Phospho (STY) _PEELHS(ph)MLMCK_ PEELHS(1)MLMCK PEELHS(60.6)MLMCK 0 0 1 0 REV__B3KN03 REV__B3KN03 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 727.8013 2 727.797523 1453.58049 71741.7 0.95641 0.00069607 3.9554 0.0028787 4.9118 0.0035748 727.800468593328 731.807331529024 44.628 1.6176 44.628 43.902 45.52 0 860 149 9 0 0 0 0.0078593 2 26320 60.598 47.194 1 1.5489 1.0355 0 143580000 56683000 86897000 + 4371 1265 2241 2482 7199;7200 7199 2600 PEELHSMLMCK 11 1 0 Unmodified _PEELHSMLMCK_ 0 0 0 0 REV__B3KN03 REV__B3KN03 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 691.8242 2 687.814358 1373.61416 74279.48 0.55824 0.00038396 3.7931 0.002609 4.3514 0.0029929 687.816890234444 691.823853121761 54.868 1.454 54.868 54.275 55.729 0 510 114 8 0 0 0 0.028997 1 23253 56.729 42.063 1 0.92251 1.1693 0 42141000 21264000 20877000 + 4372 1265 2241 2483 7201 7201 PEELHSMLMCK 11 1 0 Unmodified _PEELHSMLMCK_ 0 0 0 0 REV__B3KN03 REV__B3KN03 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 691.8251 2 687.814358 1373.61416 73185.91 1.0097 0.00069446 4.1953 0.0028856 5.2049 0.00358 687.817282723416 691.824280582998 34.406 1.2837 34.406 34.039 35.322 0 571 102 11 0 0 0 0.0043343 2 18882 78.516 78.516 1 2.3375 1.5611 0 267560000 83197000 184360000 + 4373 1265 2241 2483 7202;7203 7203 PFPAVSPEPR 10 0 1 Phospho (STY) _PFPAVS(ph)PEPR_ PFPAVS(1)PEPR PFPAVS(56.36)PEPR 0 0 1 0 Q96JM3 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 588.7755 2 588.776089 1175.53762 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.133 1 84.133 83.633 84.633 0 0 0 0 0.0044154 1 53989 56.359 29.686 1 4374 1180 2242 2484 7204 7204 2328 PFSAPKPQTSPSPK 14 2 0 2 Phospho (STY) _PFSAPKPQTS(ph)PS(ph)PK_ PFS(0.001)APKPQT(0.529)S(0.588)PS(0.882)PK PFS(-27.48)APKPQT(-0.58)S(0.58)PS(6.01)PK 0 0 2 1 B4DNY3;B4DUZ8;B4DNW7;B4DNA3;B4DI38;D3DPU2;B2RDY9;Q01518 B4DNY3 B4DNY3 CAP1 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 548.9188 3 543.575556 1627.70484 81046.34 0.5132 0.00027897 -0.1487 -8.0827E-05 0.36451 0.00019814 543.575184871533 548.918299696275 59.169 0.78843 59.169 58.822 59.61 0 295 62 7 0 0 0 0.0012603 1 26447 49.463 49.463 6 0.86361 1.0575 0 32956000 16715000 16241000 4375 559 2243 2485 7205 7205 925;926 PFSAPKPQTSPSPK 14 2 0 2 Phospho (STY) _PFSAPKPQTS(ph)PS(ph)PK_ PFSAPKPQT(0.437)S(0.566)PS(0.997)PK PFS(-58.1)APKPQT(-1.12)S(1.12)PS(22.86)PK 0 0 2 1 B4DNY3;B4DUZ8;B4DNW7;B4DNA3;B4DI38;D3DPU2;B2RDY9;Q01518 B4DNY3 B4DNY3 CAP1 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 814.8607 2 814.859696 1627.70484 66823.06 0.78314 0.00063815 -0.36386 -0.0002965 0.41928 0.00034165 814.858726101346 822.874498152152 59.146 1.2357 59.146 58.392 59.628 3.8147E-06 442 100 6 0 0 0 5.3076E-05 1 26677 78.191 71.95 6 0.81401 1.0194 0 45078000 24032000 21045000 4376 559 2243 2485 7206 7206 925;926 PFSAPKPQTSPSPK 14 2 0 2 Phospho (STY) _PFSAPKPQTS(ph)PS(ph)PK_ PFSAPKPQT(0.468)S(0.547)PS(0.985)PK PFS(-33.94)APKPQT(-0.7)S(0.7)PS(15.44)PK 0 0 2 1 B4DNY3;B4DUZ8;B4DNW7;B4DNA3;B4DI38;D3DPU2;B2RDY9;Q01518 B4DNY3 B4DNY3 CAP1 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 822.8747 2 814.859696 1627.70484 66791.94 1.209 0.00098517 -0.97711 -0.00079621 0.2319 0.00018897 815.358691982102 822.873771607644 51.446 1.5606 51.446 50.843 52.404 0 696 140 8 0 0 0 0.0016935 1 31334 46.318 46.318 6 1.2936 0.97429 0 60347000 25005000 35342000 4377 559 2243 2485 7207 7207 925;926 PFSPQLSAPITTK 13 1 0 Phospho (STY) _PFS(ph)PQLSAPITTK_ PFS(1)PQLSAPITTK PFS(57.63)PQLS(-57.63)APIT(-90.23)T(-96.96)K 0 0 1 0 A0A087WYS3;H7C4X9;A0A087WVZ6;Q9ULU4;A0A087WV57;A6H8Y8;Q5JV90 A0A087WYS3 A0A087WYS3 ZMYND8;DKFZp564P1772 Protein kinase C-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 733.8694 2 733.868175 1465.7218 70475.63 1.2318 0.00090397 -0.66708 -0.00048955 0.56471 0.00041442 733.868043649813 737.875099800583 105.17 1.0037 105.17 104.79 105.79 0 334 68 7 0 0 0 1.6876E-16 3 60789 124.62 100.94 4 0.58652 0.74263 0 43440000 27680000 15760000 4378 258 2244 2486 7208;7209;7210 7209 410 PFSPQLSAPITTK 13 1 0 Phospho (STY) _PFS(ph)PQLSAPITTK_ PFS(1)PQLSAPITTK PFS(46.26)PQLS(-46.26)APIT(-65.31)T(-64.56)K 0 0 1 0 A0A087WYS3;H7C4X9;A0A087WVZ6;Q9ULU4;A0A087WV57;A6H8Y8;Q5JV90 A0A087WYS3 A0A087WYS3 ZMYND8;DKFZp564P1772 Protein kinase C-binding protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 737.8754 2 733.868175 1465.7218 71756.05 1.1996 0.00088034 0.021539 1.5807E-05 1.2211 0.00089615 733.868124930192 737.875099073327 110.95 0.73486 110.95 110.61 111.34 0 284 69 7 0 0 0 0.00031085 3 71303 80.102 67.471 4 2.1173 1.5807 0 18985000 6506800 12479000 4379 258 2244 2486 7211;7212;7213 7211 410 PGEYSYFSPR 10 0 1 Phospho (STY) _PGEYSYFS(ph)PR_ PGEYSYFS(1)PR PGEY(-129.7)S(-43.38)Y(-99.75)FS(43.38)PR 0 0 1 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 641.7611 2 641.760636 1281.50672 NaN NaN NaN 0.19566 0.00012557 NaN NaN NaN NaN 83.588 2.5105 83.588 82.473 84.983 0 0 0 0 1.9391E-122 3 45455 187.93 124.24 4 NaN NaN 0 166350000 166350000 0 4380 464 2245 2487 7214;7215;7216 7216 804;805 PGEYSYFSPR 10 0 1 Phospho (STY) _PGEYSYFS(ph)PR_ PGEYSYFS(1)PR PGEY(-136.23)S(-47.38)Y(-114.64)FS(47.38)PR 0 0 1 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 641.7611 2 641.760636 1281.50672 75366.75 0.9722 0.00062392 0.074952 4.8101E-05 1.0471 0.00067202 641.760661685377 646.764684002961 84.086 2.5982 84.086 83.409 86.007 0 1250 239 11 0 0 0 7.5827E-80 6 54202 201.38 134.78 4 1.69 1.0978 0 546490000 203590000 342900000 4381 464 2245 2487 7217;7218;7219;7220;7221;7222 7220 804;805 PGGPPNPPGPSPK 13 1 0 Phospho (STY) _PGGPPNPPGPS(ph)PK_ PGGPPNPPGPS(1)PK PGGPPNPPGPS(84.36)PK 0 0 1 0 B9EGQ5;M0QXA7;O95785;B3KR89 B9EGQ5 B9EGQ5 WIZ Protein Wiz MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 643.8046 2 639.797553 1277.58055 76605.28 0.85225 0.00054527 0.021927 1.4029E-05 0.87417 0.00055929 639.797460560463 643.804554434277 45.261 1.0071 45.261 44.742 45.749 0 324 72 6 0 0 0 0.00013933 2 16846 84.365 84.365 1 0.55983 0.66445 0 11113000 7011500 4101600 4382 731 2246 2488 7223;7224 7224 1213 PGGPPNPPGPSPK 13 1 0 Phospho (STY) _PGGPPNPPGPS(ph)PK_ PGGPPNPPGPS(1)PK PGGPPNPPGPS(52.1)PK 0 0 1 0 B9EGQ5;M0QXA7;O95785;B3KR89 B9EGQ5 B9EGQ5 WIZ Protein Wiz MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 639.7988 2 639.797553 1277.58055 77684.3 1.0825 0.00069259 -0.27974 -0.00017898 0.80277 0.00051361 639.797357916541 643.804327656756 35.202 0.89828 35.202 34.771 35.67 0 286 71 6 0 0 0 0.0053863 2 19460 52.101 52.101 1 1.4168 1.0845 0 17203000 5920100 11283000 4383 731 2246 2488 7225;7226 7225 1213 PGGSSPPAHPSLPGDGLTAK 20 1 0 Phospho (STY) _PGGSS(ph)PPAHPSLPGDGLTAK_ PGGS(0.28)S(0.719)PPAHPS(0.001)LPGDGLTAK PGGS(-4.1)S(4.1)PPAHPS(-28.21)LPGDGLT(-43.53)AK 0 0 1 0 A6NHN7;A6NHB5;Q14202;A8K3Z7;A6NL54;A6NC58 A6NHN7 A6NHN7 ZMYM3 Zinc finger MYM-type protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 644.3104 3 641.638445 1921.89351 75054.04 0.8529 0.00054725 -0.10684 -6.8551E-05 0.74606 0.0004787 642.307847792153 644.643949612695 82.631 1.7511 82.631 81.682 83.434 0 718 160 7 0 0 0 1.598E-05 2 44223 48.286 44.683 4 0.59062 0.73351 0 99245000 63202000 36043000 4384 426 2247 2489 7227;7228 7228 738;739 PGGSSPPAHPSLPGDGLTAK 20 1 0 Phospho (STY) _PGGS(ph)SPPAHPSLPGDGLTAK_ PGGS(0.497)S(0.497)PPAHPS(0.005)LPGDGLTAK PGGS(0)S(0)PPAHPS(-19.94)LPGDGLT(-40.22)AK 0 0 1 0 A6NHN7;A6NHB5;Q14202;A8K3Z7;A6NL54;A6NC58 A6NHN7 A6NHN7 ZMYM3 Zinc finger MYM-type protein 3 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 965.9586 2 961.95403 1921.89351 NaN NaN NaN 0.061924 5.9568E-05 NaN NaN NaN NaN 82.56 0.11232 82.56 82.482 82.594 0 0 0 0 0.00054941 1 44111 45.115 27.013 4 NaN NaN 0 15295000 0 15295000 4385 426 2247 2489 7229 7229 738;739 PGHLQFYSLQSDK 13 1 0 Unmodified _PGHLQFYSLQSDK_ 0 0 0 0 A8K330;Q8IWA0 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 510.2617 3 507.256174 1518.74669 86395.52 0.38626 0.00019593 -0.23069 -0.00011702 0.15557 7.8912E-05 507.59021623633 509.927473764301 106.59 0.37028 106.59 106.37 106.74 0 74 25 4 0 0 0 0.023809 1 62023 24.951 24.951 1 0.78916 0.94498 0 14102000 7366700 6735400 4386 452 2248 2490 7230 7230 PGPTPSGTNVGSSGRSPSK 19 1 1 Phospho (STY) _PGPTPSGTNVGS(ph)SGRSPSK_ PGPTPS(0.003)GT(0.003)NVGS(0.315)S(0.315)GRS(0.315)PS(0.048)K PGPT(-31.08)PS(-20.64)GT(-20.64)NVGS(0)S(0)GRS(0)PS(-8.19)K 0 0 1 1 Q53FA5;P60468 Q53FA5 Q53FA5 SEC61B Protein transport protein Sec61 subunit beta MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 617.2864 3 617.286183 1848.83672 76243.59 0.53432 0.00032983 -0.038137 -2.3542E-05 0.49618 0.00030628 617.286200374775 623.293554567527 21.425 0.58507 21.425 21.194 21.779 0 143 24 10 0 0 0 7.7137E-05 1 8166 43.38 35.405 7 0.60674 0.46867 0 144450000 89709000 54743000 4387 1013 2249 2491 7231 7231 1844;1845;1846 PGPTPSGTNVGSSGRSPSK 19 1 1 Phospho (STY) _PGPTPSGTNVGSSGRS(ph)PSK_ PGPTPSGTNVGS(0.024)S(0.024)GRS(0.938)PS(0.014)K PGPT(-81.7)PS(-56.54)GT(-36.84)NVGS(-15.87)S(-15.87)GRS(15.87)PS(-18.41)K 0 0 1 1 Q53FA5;P60468 Q53FA5 Q53FA5 SEC61B Protein transport protein Sec61 subunit beta MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 925.4252 2 925.425636 1848.83672 63362.97 0.55446 0.00051311 -0.065668 -6.0771E-05 0.48879 0.00045234 925.926971944416 934.43694059925 21.422 0.46876 21.422 21.214 21.683 0 126 19 10 0 0 0 1.8268E-28 1 8167 114.06 100.29 7 0.5768 0.44519 0 90940000 57867000 33073000 4388 1013 2249 2491 7232 7232 1844;1845;1846 PGPYDRPGTAR 11 0 2 Unmodified _PGPYDRPGTAR_ 0 0 0 1 B4DKS8;A0A024R7T3;P52597 B4DKS8 B4DKS8 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 402.8759 3 396.203633 1185.58907 94158.79 -0.38085 -0.00015089 0.28126 0.00011143 -0.099589 -3.9458E-05 396.203641039856 402.875923666354 61.756 0.24137 61.756 61.628 61.869 0 65 14 7 0 0 0 0.01688 1 28619 61.213 41.426 1 1.7319 2.1127 0 21044000 8379300 12665000 4389 140 2250 2492 7233 7233 PGQPLFLDSISPK 13 1 0 Phospho (STY) _PGQPLFLDS(ph)ISPK_ PGQPLFLDS(0.5)IS(0.5)PK PGQPLFLDS(0)IS(0)PK 0 0 1 0 B7Z4V7;Q2TB10;Q49A13 B7Z4V7 B7Z4V7 ZNF800 Zinc finger protein 800 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 743.8745 2 739.868175 1477.7218 70844.37 1.0119 0.00074868 -0.046541 -3.4435E-05 0.96537 0.00071425 739.868054225744 743.875195542854 117.2 1.0104 117.2 116.76 117.77 7.6294E-06 550 90 10 0 0 0 0.00015226 1 69912 83.692 76.046 2 0.99365 1.2311 0 138230000 66026000 72199000 4390 705 2251 2493 7234 7234 1164;1165 PGQPLFLDSISPK 13 1 0 Phospho (STY) _PGQPLFLDSIS(ph)PK_ PGQPLFLDS(0.318)IS(0.682)PK PGQPLFLDS(-3.31)IS(3.31)PK 0 0 1 0 B7Z4V7;Q2TB10;Q49A13 B7Z4V7 B7Z4V7 ZNF800 Zinc finger protein 800 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 739.8699 2 739.868175 1477.7218 71436.91 1.0982 0.00081253 0.12755 9.4374E-05 1.2258 0.0009069 739.868221550643 743.875288846772 124.15 0.86497 124.15 123.67 124.54 7.6294E-06 476 80 8 0 0 0 0.010906 1 80073 40.242 35.527 2 1.3551 0.97033 0 21234000 8880400 12353000 4391 705 2251 2493 7235 7235 1164;1165 PGQPLFLDSISPKK 14 2 0 Phospho (STY) _PGQPLFLDS(ph)ISPKK_ PGQPLFLDS(0.5)IS(0.5)PKK PGQPLFLDS(0)IS(0)PKK 0 0 1 1 B7Z4V7;Q2TB10;Q49A13 B7Z4V7 B7Z4V7 ZNF800 Zinc finger protein 800 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 803.916 2 803.915656 1605.81676 69400.16 0.82396 0.00066239 0.017931 1.4415E-05 0.84189 0.00067681 803.915471531036 811.92991881571 106.98 0.62473 106.98 106.71 107.33 -7.6294E-06 242 53 6 0 0 0 6.304E-05 2 62337 75.764 60.498 2 0.92582 1.077 0 21682000 11709000 9972900 4392 705 2252 2494 7236;7237 7237 1164;1165 PGQPLFLDSISPKK 14 2 0 Phospho (STY) _PGQPLFLDSIS(ph)PKK_ PGQPLFLDS(0.477)IS(0.523)PKK PGQPLFLDS(-0.39)IS(0.39)PKK 0 0 1 1 B7Z4V7;Q2TB10;Q49A13 B7Z4V7 B7Z4V7 ZNF800 Zinc finger protein 800 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 541.6223 3 536.27953 1605.81676 81651.47 0.53477 0.00028679 0.19693 0.00010561 0.7317 0.0003924 536.279555962071 541.622323944553 107.01 0.80099 107.01 106.64 107.44 -7.6294E-06 373 68 7 0 0 0 2.6035E-05 2 62341 77.899 54.099 2 1.0319 1.3056 0 65090000 30616000 34474000 4393 705 2252 2494 7238;7239 7239 1164;1165 PGQPLFLDSISPKK 14 2 0 Phospho (STY) _PGQPLFLDS(ph)ISPKK_ PGQPLFLDS(0.566)IS(0.434)PKK PGQPLFLDS(1.16)IS(-1.16)PKK 0 0 1 1 B7Z4V7;Q2TB10;Q49A13 B7Z4V7 B7Z4V7 ZNF800 Zinc finger protein 800 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 541.6226 3 536.27953 1605.81676 82215.53 0.93949 0.00050383 -0.3339 -0.00017907 0.60559 0.00032477 536.27934088817 541.622119556575 105.1 1.1639 105.1 104.56 105.72 0 504 108 6 0 0 0 0.00090686 1 67777 43.794 28.202 2 1.3465 1.0994 0 23768000 10165000 13602000 4394 705 2252 2494 7240 7240 1164;1165 PGQPLFLDSISPKK 14 2 0 2 Phospho (STY) _PGQPLFLDS(ph)IS(ph)PKK_ PGQPLFLDS(1)IS(1)PKK PGQPLFLDS(58.81)IS(58.81)PKK 0 0 2 1 B7Z4V7;Q2TB10;Q49A13 B7Z4V7 B7Z4V7 ZNF800 Zinc finger protein 800 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 843.8997 2 843.898821 1685.78309 66735.01 0.90939 0.00076744 -0.29933 -0.00025261 0.61006 0.00051483 843.898724711113 851.912987213822 108.13 1.0317 108.13 107.74 108.77 0 339 79 8 0 0 0 0.00076669 2 63122 58.814 26.082 1 0.67578 0.85427 0 63055000 37287000 25767000 4395 705 2252 2495 7241;7242 7242 1164;1165 PGSPLLFDSTLDLETK 16 1 0 Phospho (STY) _PGS(ph)PLLFDSTLDLETK_ PGS(1)PLLFDSTLDLETK PGS(92.42)PLLFDS(-92.42)T(-98.01)LDLET(-117.68)K 0 0 1 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 910.9458 2 906.936983 1811.85941 64762.12 0.91374 0.00082871 0.057622 5.226E-05 0.97136 0.00088097 906.936993356155 910.944087220848 129.56 0.655 129.56 129.29 129.94 0 378 57 9 0 0 0 3.8997E-31 2 78661 128.74 116.11 4 0.70221 0.88743 0 45883000 27386000 18497000 4396 27 2253 2496 7243;7244 7244 34 PHSVSLNDTETRK 13 1 1 Unmodified _PHSVSLNDTETRK_ 0 0 0 1 A8KA83;Q9P0L0 A8KA83 A8KA83 VAPA Vesicle-associated membrane protein-associated protein A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 371.6931 4 371.692944 1482.74267 98856.05 0.1135 4.2189E-05 -0.12976 -4.823E-05 -0.016253 -6.0413E-06 371.692825176821 376.198486525164 81.043 0.39171 81.043 80.774 81.166 0 98 33 5 0 0 0 0.034885 1 43059 12.851 4.9401 1 1.1535 1.3163 0 22985000 11406000 11579000 4397 508 2254 2497 7245 7245 PIVSASPPSR 10 0 1 Phospho (STY) _PIVS(ph)ASPPSR_ PIVS(0.669)AS(0.272)PPS(0.059)R PIVS(3.91)AS(-3.91)PPS(-10.58)R 0 0 1 0 Q96EV2;B4DVQ2;H0Y3K4 Q96EV2 Q96EV2 RBM33 RNA-binding protein 33 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 545.7682 2 545.768264 1089.52197 83825.8 0.49902 0.00027235 -0.061516 -3.3574E-05 0.4375 0.00023877 545.768341205018 550.772287160839 58.851 1.0766 58.851 58.352 59.428 0 302 88 5 0 0 0 0.009312 2 26270 54.259 46.977 3 0.97581 1.1805 0 19467000 9400100 10067000 4398 1174 2255 2498 7246;7247 7247 2307 PKIEDVGSDEEDDSGK 16 2 0 Phospho (STY) _PKIEDVGS(ph)DEEDDSGK_ PKIEDVGS(1)DEEDDSGK PKIEDVGS(48.38)DEEDDS(-48.38)GK 0 0 1 1 A0A024RD80;P08238;B4DMA2;B4DGL0;Q6PK50;Q58FF8 A0A024RD80 A0A024RD80 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 908.3799 2 900.364576 1798.7146 64742.71 0.66434 0.00059815 0.11942 0.00010752 0.78376 0.00070567 900.364687281377 908.378912611973 58.206 0.80385 58.206 57.776 58.58 0 370 64 8 0 0 0 1.1346E-36 2 25740 132.14 132.14 2 0.75099 0.94026 0 44788000 25425000 19363000 4399 223 2256 2499 7248;7249 7249 351 PLEGRPER 8 0 2 Unmodified _PLEGRPER_ 0 0 0 1 B3KY63;F5GWX5;A0A0C4DGG9;Q14839 B3KY63 B3KY63 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 318.51 3 318.510286 952.509028 106939.2 -0.41684 -0.00013277 0.37782 0.00012034 -0.039019 -1.2428E-05 318.510356460261 325.182480368043 61.795 0.2514 61.795 61.662 61.913 -3.8147E-06 60 15 5 0 0 0 0.03398 1 28605 56.258 27.764 1 0.75109 0.92534 0 28652000 14591000 14061000 4400 324 2257 2500 7250 7250 PLEGSSSEDSPPEGQAPPSHSPR 23 0 1 Phospho (STY) _PLEGSSSEDSPPEGQAPPS(ph)HSPR_ PLEGSSSEDSPPEGQAPPS(0.5)HS(0.5)PR PLEGS(-50.87)S(-50.87)S(-50.87)EDS(-51)PPEGQAPPS(0)HS(0)PR 0 0 1 0 Q6AHZ7;Q12789 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 812.3514 3 809.014969 2424.02308 67747.7 0.52296 0.00042308 0.23345 0.00018886 0.75641 0.00061195 809.349523616644 812.685703687981 52.539 1.1021 52.539 51.856 52.958 0 571 83 11 0 0 0 6.5496E-13 1 21661 63.932 49.916 6 0.90613 1.1252 0 35831000 17680000 18151000 4401 1044 2258 2501 7251 7251 1946;1947;1948 PLEGSSSEDSPPEGQAPPSHSPR 23 0 1 Phospho (STY) _PLEGSSSEDS(ph)PPEGQAPPSHSPR_ PLEGS(0.045)S(0.042)S(0.042)EDS(0.537)PPEGQAPPS(0.153)HS(0.181)PR PLEGS(-10.74)S(-11.08)S(-11.08)EDS(4.72)PPEGQAPPS(-5.47)HS(-4.72)PR 0 0 1 0 Q6AHZ7;Q12789 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1 General transcription factor 3C polypeptide 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 812.3527 3 809.014969 2424.02308 67304.62 0.93703 0.00075807 0.61825 0.00050017 1.5553 0.0012582 809.349706466934 812.685455691108 36.832 1.9092 36.832 36.198 38.107 0 941 165 9 0 0 0 3.7507E-07 1 21128 49.088 40.355 6 1.858 1.2876 0 41093000 12510000 28583000 4402 1044 2258 2501 7252 7252 1946;1947;1948 PLFSSASPQDSSPR 14 0 1 2 Phospho (STY) _PLFSSAS(ph)PQDSS(ph)PR_ PLFSSAS(1)PQDS(0.093)S(0.907)PR PLFS(-65.08)S(-39.34)AS(39.34)PQDS(-9.87)S(9.87)PR 0 0 2 0 Q5VW31;A0A1B0GWB8;A0A1B0GW37;U3KQE8;Q5VW28;A0A1B0GVN4;B4DS74;A0A1B0GWJ4;A0A0A0MRX8;A0A1B0GU97;A0A1B0GWI9;Q5VW27;Q5VW30;Q5VW26;O00712 Q5VW31 Q5VW31 NFIB Nuclear factor 1;Nuclear factor 1 B-type MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 823.3323 2 818.326218 1634.63788 67176.64 0.90288 0.00073885 -0.081243 -6.6483E-05 0.82164 0.00067237 818.326068820278 823.330727456585 80.006 1.203 80.006 79.342 80.545 0 513 111 6 0 0 0 1.7595E-62 3 42403 172.57 138.52 10 0.85616 1.0779 0 51372000 27900000 23472000 4403 290 2259 2502 7253;7254;7255 7255 460;461;462 PLFSSASPQDSSPR 14 0 1 Phospho (STY) _PLFSSASPQDS(ph)SPR_ PLFS(0.001)S(0.001)AS(0.018)PQDS(0.49)S(0.49)PR PLFS(-26.04)S(-26.04)AS(-14.31)PQDS(0)S(0)PR 0 0 1 0 Q5VW31;A0A1B0GWB8;A0A1B0GW37;U3KQE8;Q5VW28;A0A1B0GVN4;B4DS74;A0A1B0GWJ4;A0A0A0MRX8;A0A1B0GU97;A0A1B0GWI9;Q5VW27;Q5VW30;Q5VW26;O00712 Q5VW31 Q5VW31 NFIB Nuclear factor 1;Nuclear factor 1 B-type MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 778.3436 2 778.343052 1554.67155 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.184 1 74.184 73.684 74.684 0 0 0 0 6.768E-07 1 37960 68.83 30.809 5 4404 290 2259 2503 7256 7256 460;461;462 PLLLPQPEVLSPTVK 15 1 0 Phospho (STY) _PLLLPQPEVLSPT(ph)VK_ PLLLPQPEVLS(0.408)PT(0.592)VK PLLLPQPEVLS(-1.62)PT(1.62)VK 0 0 1 0 B9EGR5;Q8IWI9;Q9H6M4 B9EGR5 B9EGR5 MGA MAX gene-associated protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 855.978 2 855.975714 1709.93687 67355.63 0.85987 0.00073603 0.19696 0.00016859 1.0568 0.00090463 855.975805725302 859.982860384596 128.91 0.56764 128.91 128.58 129.15 0 273 48 8 0 0 0 0.00035309 2 78150 77.078 77.078 2 0.60364 0.76577 0 37369000 24504000 12865000 4405 732 2260 2504 7257;7258 7257 2806 PLSASPSPAK 10 1 0 Phospho (STY) _PLS(ph)ASPSPAK_ PLS(0.93)AS(0.035)PS(0.035)PAK PLS(14.21)AS(-14.21)PS(-14.21)PAK 0 0 1 0 REV__H7C5R6 REV__H7C5R6 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 521.7571 2 517.74954 1033.48453 NaN NaN NaN NaN NaN NaN NaN NaN NaN 42.685 1 42.685 42.185 43.185 0 0 0 0 0.00973 1 25106 47.302 16.738 3 + 4406 1272 2261 2505 7259 7259 2608 PLTSPLR 7 0 1 Phospho (STY) _PLTS(ph)PLR_ PLT(0.192)S(0.808)PLR PLT(-6.24)S(6.24)PLR 0 0 1 0 P48634;B4DLY2 P48634 P48634 PRRC2A Protein PRRC2A MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 437.2267 2 432.222961 862.431369 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.25 1 57.25 56.75 57.75 0 0 0 0 0.02232 1 35226 60.019 6.2443 2 4407 997 2262 2506 7260 7260 1804 PLTYPQYSPPQPR 13 0 1 Phospho (STY) _PLTYPQYS(ph)PPQPR_ PLTYPQYS(1)PPQPR PLT(-63.74)Y(-58.89)PQY(-42.94)S(42.94)PPQPR 0 0 1 0 B4DDQ7;E9PKL5;E9PPX2;Q53GM9;B2R9B4;A0A0S2Z595;P15407 B4DDQ7 B4DDQ7 FOSL1 Fos-related antigen 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 817.3875 2 812.381981 1622.74941 66888.38 1.0464 0.00085009 0.66015 0.0005363 1.7066 0.0013864 812.883911645687 817.386500930868 89.661 1.5892 89.661 88.708 90.297 0 544 139 8 0 0 0 5.2163E-20 1 49415 130.24 111.92 4 1.4433 1.816 0 47295000 22559000 24736000 4408 358 2263 2507 7261 7261 564 PLTYPQYSPPQPR 13 0 1 Phospho (STY) _PLTYPQYS(ph)PPQPR_ PLTY(0.002)PQY(0.009)S(0.99)PPQPR PLT(-43.05)Y(-27.94)PQY(-20.66)S(20.66)PPQPR 0 0 1 0 B4DDQ7;E9PKL5;E9PPX2;Q53GM9;B2R9B4;A0A0S2Z595;P15407 B4DDQ7 B4DDQ7 FOSL1 Fos-related antigen 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 817.8881 2 812.381981 1622.74941 66504.7 0.82784 0.00067252 -0.93804 -0.00076205 -0.1102 -8.9526E-05 812.380486776038 817.386375386969 93.799 1.2976 93.799 93.236 94.534 0 562 124 8 0 0 0 1.6564E-05 2 60242 90.759 84.365 4 0.41161 0.27806 0 78037000 61140000 16897000 4409 358 2263 2507 7262;7263 7263 564 PLTYPQYSPPQPR 13 0 1 Phospho (STY) _PLTYPQYS(ph)PPQPR_ PLT(0.014)Y(0.137)PQY(0.114)S(0.736)PPQPR PLT(-17.31)Y(-7.31)PQY(-8.09)S(7.31)PPQPR 0 0 1 0 B4DDQ7;E9PKL5;E9PPX2;Q53GM9;B2R9B4;A0A0S2Z595;P15407 B4DDQ7 B4DDQ7 FOSL1 Fos-related antigen 1 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 817.3868 2 812.381981 1622.74941 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.201 1 94.201 93.701 94.701 0 0 0 0 0.0039221 1 60686 44.426 30.656 4 4410 358 2263 2507 7264 7264 564 PNAGSEEISSEDDELVEEK 19 1 0 2 Phospho (STY) _PNAGSEEIS(ph)S(ph)EDDELVEEK_ PNAGSEEIS(1)S(1)EDDELVEEK PNAGS(-38.87)EEIS(38.87)S(38.87)EDDELVEEK 0 0 2 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1118.9248 2 1118.92454 2235.83453 58495.08 0.0474 5.3037E-05 0.2947 0.00032974 0.3421 0.00038278 1119.42612007366 1122.93183565696 83.493 0.86151 83.493 83.138 84 0 508 80 8 0 0 0 1.3971E-11 2 44650 81.904 64.692 3 1.3697 1.6994 0 112650000 44533000 68115000 4411 1223 2264 2508 7265;7266 7266 2480;2481;2482 PNAGSEEISSEDDELVEEK 19 1 0 3 Phospho (STY) _PNAGS(ph)EEIS(ph)S(ph)EDDELVEEK_ PNAGS(1)EEIS(1)S(1)EDDELVEEK PNAGS(45.61)EEIS(45.61)S(45.61)EDDELVEEK 0 0 3 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1162.9177 2 1158.90771 2315.80086 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.351 1 88.351 87.851 88.851 -7.6294E-06 0 0 0 0.00069372 1 48208 45.608 37.504 1 4412 1223 2264 2509 7267 7267 2480;2481;2482 PNAGSEEISSEDDELVEEK 19 1 0 3 Phospho (STY) _PNAGS(ph)EEIS(ph)S(ph)EDDELVEEK_ PNAGS(1)EEIS(1)S(1)EDDELVEEK PNAGS(67.42)EEIS(67.42)S(67.42)EDDELVEEK 0 0 3 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1162.9138 2 1158.90771 2315.80086 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.491 1 88.491 87.991 88.991 0 0 0 0 9.3602E-07 1 48308 67.418 58.938 1 4413 1223 2264 2509 7268 7268 2480;2481;2482 PPTQVEPGTPVEK 13 1 0 Unmodified _PPTQVEPGTPVEK_ 0 0 0 0 REV__J3KQQ5 REV__J3KQQ5 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 693.8707 2 689.864274 1377.714 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.36 1 73.36 72.86 73.86 0 0 0 0 0.016417 1 37363 42.001 5.3074 1 + 4414 1273 2265 2510 7269 7269 PQQAAGMLSPK 11 1 0 Phospho (STY) _PQQAAGMLS(ph)PK_ PQQAAGMLS(1)PK PQQAAGMLS(88.16)PK 0 0 1 0 J3KQ96;E7ETY2;Q13428;B4DRA2 J3KQ96 J3KQ96 TCOF1 Treacle protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 608.2886 2 604.280681 1206.54681 79402.15 1.0341 0.00062487 0.019628 1.1861E-05 1.0537 0.00063673 604.280603266722 608.288064564967 50.501 0.84659 50.501 50.14 50.987 0 299 77 6 0 0 0 0.0002783 2 30455 88.163 79.63 1 1.2052 0.91177 0 8003600 4345000 3658600 4415 792 2266 2511 7270;7271 7271 1352 PQSDFTNDALSPK 13 1 0 Phospho (STY) _PQSDFTNDALS(ph)PK_ PQSDFT(0.072)NDALS(0.928)PK PQS(-38.16)DFT(-11.13)NDALS(11.13)PK 0 0 1 0 B2RWP5;Q96L73;Q96MN8;Q8NB95;A4QPE5 B2RWP5 B2RWP5 NSD1 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 750.3242 2 750.324328 1498.6341 73313.09 0.59998 0.00045018 -0.26537 -0.00019912 0.3346 0.00025106 750.324372775898 754.331551695362 73.264 0.88512 73.264 72.82 73.705 0 230 78 4 0 0 0 0.0006445 1 37242 74.978 38.157 3 0.78015 0.99017 0 39527000 21066000 18461000 4416 565 2267 2512 7272 7272 937 PQSDFTNDALSPK 13 1 0 Phospho (STY) _PQSDFTNDALS(ph)PK_ PQS(0.001)DFT(0.284)NDALS(0.716)PK PQS(-30.16)DFT(-4.02)NDALS(4.02)PK 0 0 1 0 B2RWP5;Q96L73;Q96MN8;Q8NB95;A4QPE5 B2RWP5 B2RWP5 NSD1 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 750.3254 2 750.324328 1498.6341 70971.27 0.9412 0.0007062 0.038738 2.9066E-05 0.97994 0.00073527 750.324550027781 754.331330203042 72.966 1.1736 72.966 72.3 73.474 0 440 108 7 0 0 0 0.0057393 1 46098 49.223 28.416 3 1.9162 1.2439 0 36076000 14068000 22008000 4417 565 2267 2512 7273 7273 937 PQTSGYTCNIPTESNLDSGEHK 22 1 0 Phospho (STY) _PQTSGYTCNIPTESNLDS(ph)GEHK_ PQTSGYTCNIPT(0.012)ES(0.126)NLDS(0.862)GEHK PQT(-40.42)S(-40.52)GY(-41.12)T(-38.61)CNIPT(-18.53)ES(-8.37)NLDS(8.37)GEHK 0 0 1 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 842.0265 3 839.019614 2514.03701 NaN NaN NaN -0.4324 -0.0003628 NaN NaN NaN NaN 71.2 0.56122 71.2 70.94 71.501 0 0 0 0 0.00026908 1 44977 42.738 25.522 7 NaN NaN 0 28820000 0 28820000 4418 1035 2268 2513 7274 7274 1919 PQVAAQSQPQSNVQGQSPVR 20 0 1 Phospho (STY) _PQVAAQSQPQSNVQGQS(ph)PVR_ PQVAAQS(0.007)QPQS(0.161)NVQGQS(0.831)PVR PQVAAQS(-20.56)QPQS(-7.12)NVQGQS(7.12)PVR 0 0 1 0 E7ETD6;Q12830;F5GXF5;J3KSK9;E9PE19;B4DJV8 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1095.021 2 1093.52113 2185.02771 58937.5 0.516 0.00056426 -0.20167 -0.00022053 0.31433 0.00034373 1094.02231467162 1099.02661525383 47.759 1.0413 47.759 47.257 48.298 0 548 74 10 0 0 0 4.2749E-05 1 18338 47.189 47.189 3 0.6651 0.83883 0 65514000 39509000 26005000 4419 791 2269 2514 7275 7275 1340 PQVAAQSQPQSNVQGQSPVRVQSPSQTR 28 0 2 2 Phospho (STY) _PQVAAQSQPQSNVQGQS(ph)PVRVQS(ph)PSQTR_ PQVAAQS(0.015)QPQS(0.414)NVQGQS(0.568)PVRVQS(0.647)PS(0.196)QT(0.16)R PQVAAQS(-18.08)QPQS(-1.72)NVQGQS(1.72)PVRVQS(6.52)PS(-6.52)QT(-7.56)R 0 0 2 1 E7ETD6;Q12830;F5GXF5;J3KSK9;E9PE19;B4DJV8 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1057.4966 3 1050.48902 3148.44522 59236.47 0.89179 0.00093681 0.20906 0.00021962 1.1008 0.0011564 1050.8233822221 1057.49558956507 58.62 0.9429 58.62 58.174 59.117 0 716 85 12 0 0 0 3.1021E-10 1 36017 47.191 41.031 15 1.6638 1.4457 0 75559000 26954000 48605000 4420 791 2270 2515 7276 7276 1340;1341 PRHQEGEIFDTEK 13 1 1 Unmodified _PRHQEGEIFDTEK_ 0 0 0 1 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B4DRX3;B2R4K7 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 535.2659 3 529.258355 1584.75323 84979.77 0.47119 0.00024938 -0.29227 -0.00015468 0.17892 9.4696E-05 529.592586923073 535.265642445595 121.87 0.58499 121.87 121.51 122.1 -7.6294E-06 125 42 6 0 0 0 0.018921 1 73699 42.317 34.947 1 0.9812 1.0753 0 10832000 5669000 5162700 4421 199 2271 2516 7277 7277 PRHQEGEIFDTEK 13 1 1 Unmodified _PRHQEGEIFDTEK_ 0 0 0 1 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B4DRX3;B2R4K7 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 535.9348 3 529.258355 1584.75323 NaN NaN NaN -0.1859 -9.8387E-05 NaN NaN NaN NaN 122.24 0.43431 122.24 122.07 122.51 0 0 0 0 0.0041333 1 73819 68.83 54.867 1 NaN NaN 0 5263500 0 5263500 4422 199 2271 2516 7278 7278 PRHQEGEIFDTEK 13 1 1 Unmodified _PRHQEGEIFDTEK_ 0 0 0 1 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B4DRX3;B2R4K7 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 535.2672 3 529.258355 1584.75323 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.02 1 121.02 120.52 121.52 0 0 0 0 0.014992 1 72987 35.657 24.395 1 4423 199 2271 2516 7279 7279 PRHQEGEIFDTEK 13 1 1 Unmodified _PRHQEGEIFDTEK_ 0 0 0 1 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B4DRX3;B2R4K7 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 529.2589 3 529.258355 1584.75323 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.46 1 121.46 120.96 121.96 0 0 0 0 0.024146 1 73332 32.624 18.594 1 4424 199 2271 2516 7280 7280 PRHQEGEIFDTEK 13 1 1 Unmodified _PRHQEGEIFDTEK_ 0 0 0 1 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B4DRX3;B2R4K7 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 529.2585 3 529.258355 1584.75323 NaN NaN NaN NaN NaN NaN NaN NaN NaN 122.99 1 122.99 122.49 123.49 0 0 0 0 0.027269 1 74419 31.675 16.13 1 4425 199 2271 2516 7281 7281 PRSPILEEK 9 1 1 Phospho (STY) _PRS(ph)PILEEK_ PRS(1)PILEEK PRS(47.71)PILEEK 0 0 1 1 E7ETD6;Q12830;F5GXF5;A0A0A0MR81;B4DDK2;B4DM40 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 583.8002 2 574.789196 1147.56384 84677.73 0.56951 0.00032735 0.43098 0.00024772 1.0005 0.00057507 574.789359162374 583.800006696581 61.631 0.25795 61.631 61.518 61.776 0 42 16 5 0 0 0 0.014136 1 28453 47.712 24.284 1 0.67453 0.73949 0 10982000 6013600 4968000 4426 791 2272 2517 7282 7282 1342 PRSPILEEK 9 1 1 Phospho (STY) _PRS(ph)PILEEK_ PRS(1)PILEEK PRS(77.64)PILEEK 0 0 1 1 E7ETD6;Q12830;F5GXF5;A0A0A0MR81;B4DDK2;B4DM40 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 583.8004 2 574.789196 1147.56384 NaN NaN NaN 0.67334 0.00038703 NaN NaN NaN NaN 27.477 0.25362 27.477 27.348 27.602 0 0 0 0 0.00049614 1 13446 77.644 26.368 1 NaN NaN 0 7165500 0 7165500 4427 791 2272 2517 7283 7283 1342 PSGGFVISGVLSPDTISSK 19 1 0 Phospho (STY) _PSGGFVISGVLS(ph)PDTISSK_ PSGGFVISGVLS(0.891)PDT(0.101)IS(0.006)S(0.002)K PS(-52.94)GGFVIS(-35.55)GVLS(9.46)PDT(-9.46)IS(-21.75)S(-27.69)K 0 0 1 0 Q03188;H0Y8J2;H0Y9W1 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 968.9821 2 964.474264 1926.93397 62078.44 0.68679 0.00066239 0.034418 3.3195E-05 0.72121 0.00069559 964.474558223297 968.481336907254 125.81 0.96037 125.81 125.37 126.33 7.6294E-06 622 84 11 0 0 0 5.077E-10 2 76150 77.871 63.439 6 0.67847 0.844 0 80484000 49795000 30689000 4428 1035 2273 2518 7284;7285 7285 1912;1913 PSGGFVISGVLSPDTISSK 19 1 0 Phospho (STY) _PSGGFVISGVLS(ph)PDTISSK_ PSGGFVISGVLS(0.999)PDT(0.001)ISSK PS(-126.8)GGFVIS(-46.45)GVLS(31.62)PDT(-31.62)IS(-40.86)S(-40.86)K 0 0 1 0 Q03188;H0Y8J2;H0Y9W1 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 964.9778 2 964.474264 1926.93397 62131.52 0.72154 0.0006959 0.19616 0.0001892 0.9177 0.0008851 964.474380898967 968.481579647384 134.41 0.49782 134.41 134.24 134.74 -1.5259E-05 181 28 13 0 0 0 7.8596E-74 3 86696 164.5 154.01 6 1.4392 0.96137 0 232050000 96331000 135720000 4429 1035 2273 2518 7286;7287;7288 7287 1912;1913 PSLVGDGEGAILSPSQK 17 1 0 Phospho (STY) _PSLVGDGEGAILS(ph)PSQK_ PSLVGDGEGAILS(0.818)PS(0.182)QK PS(-39.71)LVGDGEGAILS(6.53)PS(-6.53)QK 0 0 1 0 B3KND7;Q9Y2X9 B3KND7 B3KND7 ZNF281 Zinc finger protein 281 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 868.42 2 867.919124 1733.8237 69239.99 0.90115 0.00078212 -0.24554 -0.00021311 0.65561 0.00056901 867.91910191712 871.926015846094 99.253 0.68661 99.253 98.886 99.573 0 101 60 4 0 0 0 0.0018632 1 56412 45.14 33.861 3 0.74301 0.88842 0 13582000 6592800 6989000 4430 581 2274 2519 7289 7289 964 PSPAQQTDRSSPVRPSSEK 19 1 2 Phospho (STY) _PSPAQQTDRS(ph)SPVRPSSEK_ PSPAQQT(0.169)DRS(0.397)S(0.397)PVRPS(0.019)S(0.019)EK PS(-47.86)PAQQT(-3.71)DRS(0)S(0)PVRPS(-13.3)S(-13.3)EK 0 0 1 2 B3KMS2;O94800;Q9NSZ7;Q9UIW7;Q9UFC7;B3KMS8;B3KV94;Q9UFD3;Q9UGL1 B3KMS2 B3KMS2 HRIHFB2060;DKFZp434I2412;DKFZp434I0617;DKFZp434D0815;KDM5B;DKFZp434N0335 Lysine-specific demethylase 5B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 712.3361 3 712.002335 2132.98517 71777.31 0.9962 0.00070929 -1.2076 -0.00085982 -0.21142 -0.00015053 712.335801117088 721.345052629791 16.982 0.37249 16.982 16.81 17.182 0 85 13 12 0 0 0 2.8051E-07 1 4224 57.068 49.853 6 0.80067 0.73594 0 49757000 28395000 21362000 4431 577 2275 2520 7290 7290 956;957 PSQKQSIEPDRADNIR 16 1 2 Unmodified _PSQKQSIEPDRADNIR_ 0 0 0 2 B4DVG9;E7ETZ8;B9EJB6;Q49MG5;Q05CN5;A2VCS9;A2VCT0 B4DVG9 B4DVG9 MAP9 Microtubule-associated protein 9 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 627.9982 3 618.653656 1852.93914 NaN NaN NaN 0.15366 9.5062E-05 NaN NaN NaN NaN 88.134 1.0107 88.134 87.522 88.533 0 0 0 0 0.0029017 1 47727 40.801 22.884 1 NaN NaN 0 19455000 0 19455000 4432 667 2276 2521 7291 7291 PSSSPVIFAGGQDR 14 0 1 Phospho (STY) _PSSS(ph)PVIFAGGQDR_ PSS(0.243)S(0.757)PVIFAGGQDR PS(-49.66)S(-4.94)S(4.94)PVIFAGGQDR 0 0 1 0 H3BSS4;Q15366;B4DLC0 H3BSS4 H3BSS4 PCBP2 Poly(rC)-binding protein 2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 749.3411 2 749.340313 1496.66607 NaN NaN NaN -0.15124 -0.00011333 NaN NaN NaN NaN 79.758 1.1842 79.758 79.126 80.31 0 0 0 0 3.1173E-47 2 42202 136.6 73.512 3 NaN NaN 0 16884000 16884000 0 4433 872 2277 2522 7292;7293 7293 1481 PSTPTINVLESK 12 1 0 Phospho (STY) _PST(ph)PTINVLESK_ PS(0.237)T(0.762)PT(0.001)INVLESK PS(-5.06)T(5.06)PT(-30.67)INVLES(-54.52)K 0 0 1 0 Q75MP9;F2YMM1;Q75MQ0;S4S3R8;A0A090N8E9;Q15910;B7Z8K5 Q75MP9 Q75MP9 EZH2 Histone-lysine N-methyltransferase EZH2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 687.3439 2 683.336707 1364.65886 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.426 1 94.426 93.926 94.926 0 0 0 0 0.0035177 1 52851 58.098 22.575 4 4434 278 2278 2523 7294 7294 2678 PTALSTPSFSSPK 13 1 0 Phospho (STY) _PTALSTPS(ph)FSSPK_ PTALS(0.074)T(0.074)PS(0.284)FS(0.284)S(0.284)PK PT(-44.23)ALS(-5.84)T(-5.84)PS(0)FS(0)S(0)PK 0 0 1 0 B4DHJ4;A2RU29;Q4VBZ9;Q14149 B4DHJ4 B4DHJ4 MORC3 MORC family CW-type zinc finger protein 3 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 700.8285 2 700.328882 1398.64321 NaN NaN NaN -1.8952 -0.0013273 NaN NaN NaN NaN 86.108 0.16171 86.108 86.019 86.181 0 0 0 0 0.0037812 1 46547 51.436 38.058 6 NaN NaN 0 5483700 5483700 0 4435 408 2279 2524 7295 7295 699;700;701 PTALSTPSFSSPK 13 1 0 Phospho (STY) _PTALSTPS(ph)FSSPK_ PTALS(0.019)T(0.073)PS(0.302)FS(0.302)S(0.302)PK PT(-49.32)ALS(-11.93)T(-6.16)PS(0)FS(0)S(0)PK 0 0 1 0 B4DHJ4;A2RU29;Q4VBZ9;Q14149 B4DHJ4 B4DHJ4 MORC3 MORC family CW-type zinc finger protein 3 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 700.3293 2 700.328882 1398.64321 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.229 1 85.229 84.729 85.729 -7.6294E-06 0 0 0 0.00039605 1 46003 56.359 43.403 6 4436 408 2279 2524 7296 7296 699;700;701 PTALSTPSFSSPK 13 1 0 Phospho (STY) _PTALSTPS(ph)FSSPK_ PTALS(0.002)T(0.003)PS(0.331)FS(0.331)S(0.331)PK PT(-83.05)ALS(-21.88)T(-19.88)PS(0)FS(0)S(0)PK 0 0 1 0 B4DHJ4;A2RU29;Q4VBZ9;Q14149 B4DHJ4 B4DHJ4 MORC3 MORC family CW-type zinc finger protein 3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 704.3369 2 700.328882 1398.64321 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.594 1 85.594 85.094 86.094 0 0 0 0 0.0027587 1 46228 93.766 64.022 6 4437 408 2279 2524 7297 7297 699;700;701 PTALSTPSFSSPK 13 1 0 Phospho (STY) _PTALSTPS(ph)FSSPK_ PTALS(0.001)T(0.05)PS(0.317)FS(0.317)S(0.317)PK PT(-86.66)ALS(-26.63)T(-8.05)PS(0)FS(0)S(0)PK 0 0 1 0 B4DHJ4;A2RU29;Q4VBZ9;Q14149 B4DHJ4 B4DHJ4 MORC3 MORC family CW-type zinc finger protein 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 704.8376 2 700.328882 1398.64321 72031.1 1.0725 0.0007511 -0.13021 -9.1192E-05 0.94228 0.0006599 700.329145394847 704.335734158639 87.676 0.78841 87.676 87.3 88.089 0 332 74 8 0 0 0 1.413E-06 1 56391 96.734 75.864 6 0.86656 0.65903 0 11296000 4853200 6442500 4438 408 2279 2524 7298 7298 699;700;701 PTSTTK 6 1 0 Unmodified _PTSTTK_ 0 0 0 0 Q5JPJ9;B2RBR3;A8K4E0;O95274 Q5JPJ9 Q5JPJ9 DKFZp686D0114;LYPD3 Ly6/PLAUR domain-containing protein 3 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 321.6809 2 317.673954 633.333355 NaN NaN NaN 0.32887 0.00010447 NaN NaN NaN NaN 14.19 0.50764 14.19 14.116 14.624 0 0 0 0 0.0011646 1 2227 69.093 26.374 1 NaN NaN 0 17500000 0 17500000 4439 460 2280 2525 7299 7299 PVEIEIETPEQAK 13 1 0 Phospho (STY) _PVEIEIET(ph)PEQAK_ PVEIEIET(1)PEQAK PVEIEIET(190.27)PEQAK 0 0 1 0 X5DRB1;A8K146;A0A024R2M8;Q01831;D9I4E1;D2CPK1;E7EUB5;D2CPI9;D2CPJ0 X5DRB1 X5DRB1 XPC DNA repair protein complementing XP-C cells ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 785.8782 2 781.871111 1561.72767 NaN NaN NaN 0.3667 0.00028671 NaN NaN NaN NaN 91.853 0.18146 91.853 91.712 91.893 0 0 0 0 2.7183E-149 1 50819 190.27 147.55 1 NaN NaN 0 11084000 0 11084000 4440 66 2281 2526 7300 7300 2624 PVEIEIETPEQAK 13 1 0 Phospho (STY) _PVEIEIET(ph)PEQAK_ PVEIEIET(1)PEQAK PVEIEIET(264.29)PEQAK 0 0 1 0 X5DRB1;A8K146;A0A024R2M8;Q01831;D9I4E1;D2CPK1;E7EUB5;D2CPI9;D2CPJ0 X5DRB1 X5DRB1 XPC DNA repair protein complementing XP-C cells ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 781.8723 2 781.871111 1561.72767 NaN NaN NaN 0.66131 0.00051706 NaN NaN NaN NaN 92.39 0.38895 92.39 92.269 92.658 0 0 0 0 0 1 51177 264.29 226.1 1 NaN NaN 0 25926000 25926000 0 4441 66 2281 2526 7301 7301 2624 PVEIEIETPEQAK 13 1 0 Phospho (STY) _PVEIEIET(ph)PEQAK_ PVEIEIET(1)PEQAK PVEIEIET(50.35)PEQAK 0 0 1 0 X5DRB1;A8K146;A0A024R2M8;Q01831;D9I4E1;D2CPK1;E7EUB5;D2CPI9;D2CPJ0 X5DRB1 X5DRB1 XPC DNA repair protein complementing XP-C cells MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 782.6365 2 781.871111 1561.72767 69463.7 0.41285 0.00032279 0.6377 0.0004986 1.0506 0.0008214 781.871479944769 785.878784494522 92.105 0.92694 92.105 91.577 92.504 0 175 81 6 0 0 0 0.024126 1 50630 50.353 50.353 1 0.42494 0.52791 0 95463000 67025000 28439000 4442 66 2281 2526 7302 7302 2624 PVEIEIETPEQAK 13 1 0 Phospho (STY) _PVEIEIET(ph)PEQAK_ PVEIEIET(1)PEQAK PVEIEIET(127.36)PEQAK 0 0 1 0 X5DRB1;A8K146;A0A024R2M8;Q01831;D9I4E1;D2CPK1;E7EUB5;D2CPI9;D2CPJ0 X5DRB1 X5DRB1 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 786.381 2 781.871111 1561.72767 70672.24 0.93422 0.00073044 0.5017 0.00039226 1.4359 0.0011227 781.871264099676 785.878776699545 95.691 1.0666 95.691 94.995 96.062 0 413 104 7 0 0 0 4.9797E-16 2 61418 127.36 127.36 1 0.77823 0.60693 0 14043000 7969700 6073400 4443 66 2281 2526 7303;7304 7303 2624 PVGSLAGIGEVLGK 14 1 0 Unmodified _PVGSLAGIGEVLGK_ 0 0 0 0 A0A024R5H0;O75531;B2R4V4 A0A024R5H0 A0A024R5H0 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 652.8873 2 648.879727 1295.7449 NaN NaN NaN NaN NaN NaN NaN NaN NaN 119.33 1 119.33 118.83 119.83 7.6294E-06 0 0 0 0.0012331 1 76987 50.95 24.907 1 4444 107 2282 2527 7305 7305 PVGSLAGIGEVLGK 14 1 0 Unmodified _PVGSLAGIGEVLGK_ 0 0 0 0 A0A024R5H0;O75531;B2R4V4 A0A024R5H0 A0A024R5H0 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 648.8809 2 648.879727 1295.7449 NaN NaN NaN NaN NaN NaN NaN NaN NaN 119.34 1 119.34 118.84 119.84 0 0 0 0 0.02797 1 76994 36.952 12.608 1 4445 107 2282 2527 7306 7306 PVGSTGVIK 9 1 0 Phospho (STY) _PVGS(ph)TGVIK_ PVGS(0.802)T(0.198)GVIK PVGS(6.07)T(-6.07)GVIK 0 0 1 0 H0Y8Y3;A0A0A0MSP3;Q4W5K9;Q59FC9;B7Z481;B7Z8X5;A0A024RDE8;Q96HC4 H0Y8Y3 H0Y8Y3 PDLIM5;LIM PDZ and LIM domain protein 5 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 473.2487 2 469.241351 936.468148 NaN NaN NaN -0.4968 -0.00023312 NaN NaN NaN NaN 19.687 0.84968 19.687 19.362 20.211 0 0 0 0 0.029681 1 6483 41.429 23.581 2 NaN NaN 0 1347300 0 1347300 4446 227 2283 2528 7307 7307 356;2663 PVGSTGVIK 9 1 0 Phospho (STY) _PVGS(ph)TGVIK_ PVGS(0.5)T(0.5)GVIK PVGS(0)T(0)GVIK 0 0 1 0 H0Y8Y3;A0A0A0MSP3;Q4W5K9;Q59FC9;B7Z481;B7Z8X5;A0A024RDE8;Q96HC4 H0Y8Y3 H0Y8Y3 PDLIM5;LIM PDZ and LIM domain protein 5 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 473.2479 2 469.241351 936.468148 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.004 1 45.004 44.504 45.504 -3.8147E-06 0 0 0 0.013131 1 26699 45.718 6.1755 2 4447 227 2283 2528 7308 7308 356;2663 PVHHGVNQLK 10 1 0 Unmodified _PVHHGVNQLK_ 0 0 0 0 A0A024R2Q4;P61313;B4DLP4;E7EQV9;E7EX53;E7ENU7;B4DEN1;A4D1Q5 A0A024R2Q4 A0A024R2Q4 RPL15;LOC136321 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 376.8805 3 376.880602 1127.61998 96518.43 -0.25637 -9.662E-05 0.20122 7.5836E-05 -0.055148 -2.0784E-05 376.880728722857 379.552029952311 83.255 2.7323 83.255 82.99 85.722 0 1005 254 6 0 0 0 9.0123E-07 8 45095 111.82 87.004 1 0.92766 1.1443 0 1048400000 561110000 487280000 4448 68 2284 2529 7309;7310;7311;7312;7313;7314;7315;7316 7313 PVHHGVNQLK 10 1 0 Unmodified _PVHHGVNQLK_ 0 0 0 0 A0A024R2Q4;P61313;B4DLP4;E7EQV9;E7EX53;E7ENU7;B4DEN1;A4D1Q5 A0A024R2Q4 A0A024R2Q4 RPL15;LOC136321 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 564.8175 2 564.817264 1127.61998 82666.51 0.31651 0.00017877 0.090412 5.1066E-05 0.40692 0.00022984 564.8175504938 568.824391437221 83.274 0.43005 83.274 83.111 83.541 0 97 36 5 0 0 0 0.0042351 1 44647 78.77 52.386 1 1.024 1.2956 0 31900000 14875000 17025000 4449 68 2284 2529 7317 7317 PVHHGVNQLK 10 1 0 Unmodified _PVHHGVNQLK_ 0 0 0 0 A0A024R2Q4;P61313;B4DLP4;E7EQV9;E7EX53;E7ENU7;B4DEN1;A4D1Q5 A0A024R2Q4 A0A024R2Q4 RPL15;LOC136321 Ribosomal protein L15;60S ribosomal protein L15 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 376.8803 3 376.880602 1127.61998 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.456 1 85.456 84.956 85.956 0 0 0 0 0.0026022 1 46143 73.573 47.53 1 4450 68 2284 2529 7318 7318 PVHLTAFLGYK 11 1 0 Unmodified _PVHLTAFLGYK_ 0 0 0 0 B3KS36;P39023;Q8TBW1;Q96QL0;H7C3M2;H7C422;B4DN06;F8WCR1 B3KS36 B3KS36 RPL3 60S ribosomal protein L3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 418.576 3 415.904524 1244.69174 92393.55 0.08236 3.4254E-05 -0.036904 -1.5349E-05 0.045455 1.8905E-05 415.90438626874 418.576025411779 145.49 0.20831 145.49 145.37 145.57 0 20 5 5 0 0 0 0.0079324 1 83880 42.21 42.21 1 1.0895 1.2916 0 6294000 3075000 3219000 4451 597 2285 2530 7319 7319 PVRDEYEYVSDDGELK 16 1 1 Phospho (STY) _PVRDEYEYVS(ph)DDGELK_ PVRDEYEYVS(1)DDGELK PVRDEY(-53.35)EY(-36.38)VS(36.38)DDGELK 0 0 1 1 O75151;Q8N359;B4DH04 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1006.9363 2 997.424968 1992.83538 61503.19 0.36488 0.00036394 0.19378 0.00019328 0.55866 0.00055722 997.9263948699 1006.43645993658 74.146 1.1699 74.146 73.697 74.867 0 386 99 6 0 0 0 4.2569E-05 1 46945 67.605 67.605 3 1.4288 1.1007 0 34265000 12508000 21757000 4452 934 2286 2531 7320 7320 1592 PVSSAASVYAGAGGSGSR 18 0 1 Phospho (STY) _PVSS(ph)AASVYAGAGGSGSR_ PVS(0.03)S(0.967)AAS(0.002)VYAGAGGSGSR PVS(-15.03)S(15.03)AAS(-26.15)VY(-55.37)AGAGGS(-52.91)GS(-52.91)R 0 0 1 0 F8VZY9;B2RA03;A0A024RAY2;P05783 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 835.8766 2 830.869966 1659.72538 69349.43 0.78521 0.00065241 -0.81253 -0.0006751 -0.027316 -2.2696E-05 830.869871135775 835.874368985551 61.592 0.78849 61.592 61.304 62.092 3.8147E-06 149 54 6 0 0 0 3.5523E-17 1 28299 101.53 85.39 6 1.8836 2.2552 0 17141000 7439200 9701500 4453 186 2287 2532 7321 7321 294;295;296 PVSSAASVYAGAGGSGSR 18 0 1 Phospho (STY) _PVSS(ph)AASVYAGAGGSGSR_ PVS(0.152)S(0.844)AAS(0.002)VY(0.002)AGAGGSGSR PVS(-7.45)S(7.45)AAS(-25.49)VY(-26.07)AGAGGS(-43.03)GS(-43.03)R 0 0 1 0 F8VZY9;B2RA03;A0A024RAY2;P05783 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 836.3771 2 830.869966 1659.72538 NaN NaN NaN 0.44362 0.00036859 NaN NaN NaN NaN 62.692 0.39161 62.692 62.473 62.865 3.8147E-06 0 0 0 3.5498E-05 1 29264 53.169 41.637 6 NaN NaN 0 2661000 0 2661000 4454 186 2287 2532 7322 7322 294;295;296 PVSSAASVYAGAGGSGSR 18 0 1 Phospho (STY) _PVSSAASVYAGAGGS(ph)GSR_ PVSSAASVYAGAGGS(0.787)GS(0.213)R PVS(-98.09)S(-81.55)AAS(-41.7)VY(-50.57)AGAGGS(5.67)GS(-5.67)R 0 0 1 0 F8VZY9;B2RA03;A0A024RAY2;P05783 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 835.8749 2 830.869966 1659.72538 64034.97 1.1122 0.0009241 -0.67806 -0.00056338 0.43415 0.00036072 830.870009708417 835.874077088146 53.595 2.6974 53.595 52.669 55.366 0 1084 230 7 0 0 0 1.355E-117 3 32358 202.94 183.19 6 1.7089 1.1445 0 119600000 43678000 75918000 4455 186 2287 2532 7323;7324;7325 7324 294;295;296 PVSSAASVYAGAGGSGSR 18 0 1 Phospho (STY) _PVSSAAS(ph)VYAGAGGSGSR_ PVSSAAS(0.999)VYAGAGGSGSR PVS(-45.73)S(-38.13)AAS(37.46)VY(-41.07)AGAGGS(-37.46)GS(-37.46)R 0 0 1 0 F8VZY9;B2RA03;A0A024RAY2;P05783 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 835.8746 2 830.869966 1659.72538 NaN NaN NaN 0.28728 0.00023869 NaN NaN NaN NaN 54.658 1.3523 54.658 54.343 55.695 0 0 0 0 2.8671E-08 1 33436 79.514 65.095 6 NaN NaN 0 12625000 0 12625000 4456 186 2287 2532 7326 7326 294;295;296 PVSSAASVYAGAGGSGSR 18 0 1 Phospho (STY) _PVSSAAS(ph)VYAGAGGSGSR_ PVSSAAS(0.998)VY(0.001)AGAGGSGSR PVS(-35.62)S(-33.3)AAS(32.9)VY(-32.9)AGAGGS(-33.62)GS(-33.62)R 0 0 1 0 F8VZY9;B2RA03;A0A024RAY2;P05783 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 830.871 2 830.869966 1659.72538 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.72 1 54.72 54.22 55.22 0 0 0 0 2.4756E-08 1 33409 75.682 61.912 6 4457 186 2287 2532 7327 7327 294;295;296 PVSVAGSPLSPGPVR 15 0 1 2 Phospho (STY) _PVSVAGS(ph)PLS(ph)PGPVR_ PVS(0.003)VAGS(0.998)PLS(0.999)PGPVR PVS(-27.29)VAGS(27.29)PLS(31.08)PGPVR 0 0 2 0 Q96RG4;Q96RG5;Q9Y4H2 Q96RG4 Q96RG4 IRS2 Insulin receptor substrate 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 795.3737 2 790.367689 1578.72082 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.538 1 95.538 95.038 96.038 -7.6294E-06 0 0 0 0.00022639 1 53691 54.501 37.757 3 4458 1186 2288 2533 7328 7328 2334;2335 PVVSDDDSEEEQEEDR 16 0 1 Phospho (STY) _PVVSDDDS(ph)EEEQEEDR_ PVVSDDDS(1)EEEQEEDR PVVS(-38.98)DDDS(38.98)EEEQEEDR 0 0 1 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;B3KNW7;B4E0F1;B4DSI8 A7E2E1 A7E2E1 SMARCA4 Transcription activator BRG1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 984.3677 2 979.362761 1956.71097 61793.3 0.51087 0.00050032 -0.58766 -0.00057553 -0.076793 -7.5208E-05 979.363202878764 984.866935928101 42.579 0.93301 42.579 42.075 43.008 0 389 70 7 0 0 0 3.0588E-22 2 15384 115.8 108.74 2 1.6531 1.8256 0 8158100 2821400 5336700 4459 434 2289 2534 7329;7330 7330 756 PVVSSEAKAFIR 12 1 1 2 Phospho (STY) _PVVS(ph)S(ph)EAKAFIR_ PVVS(1)S(1)EAKAFIR PVVS(53.57)S(53.57)EAKAFIR 0 0 2 1 Q53TE4;A8K8Z3;Q9UKI8 Q53TE4 Q53TE4 TLK1 Serine/threonine-protein kinase tousled-like 1 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 741.3486 2 732.3384 1462.66225 NaN NaN NaN -2.0504 -0.0015016 NaN NaN NaN NaN 34.705 0.47657 34.705 34.429 34.906 0 0 0 0 0.0047192 1 19215 53.569 9.672 1 NaN NaN 0 10468000 0 10468000 4460 497 2290 2535 7331 7331 852;853 PYPVSPSDK 9 1 0 Phospho (STY) _PYPVS(ph)PSDK_ PYPVS(0.848)PS(0.151)DK PY(-37.14)PVS(7.49)PS(-7.49)DK 0 0 1 0 Q5TCC6;Q9P1N9;Q7L4K8;B4DVX2;Q6P0M4;Q7Z355;J3KR24;Q7Z3U5;A0A0A0MSX9;Q59G75;P41252 Q5TCC6 Q5TCC6 IARS;DKFZp686L17145;DKFZp686L0869 Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 535.2341 2 535.233722 1068.45289 85666.64 0.37041 0.00019826 0.24863 0.00013308 0.61904 0.00033133 535.233694269811 539.240909421413 50.236 1.0225 50.236 49.796 50.818 3.8147E-06 212 88 4 0 0 0 0.029413 1 20000 40.715 36.024 3 1.9796 2.3482 0 9537300 2734200 6803100 4461 295 2291 2536 7332 7332 473 PYPVSPSDK 9 1 0 Phospho (STY) _PYPVS(ph)PSDK_ PYPVS(0.873)PS(0.127)DK PY(-37.44)PVS(8.38)PS(-8.38)DK 0 0 1 0 Q5TCC6;Q9P1N9;Q7L4K8;B4DVX2;Q6P0M4;Q7Z355;J3KR24;Q7Z3U5;A0A0A0MSX9;Q59G75;P41252 Q5TCC6 Q5TCC6 IARS;DKFZp686L17145;DKFZp686L0869 Isoleucine--tRNA ligase, cytoplasmic MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 539.2408 2 535.233722 1068.45289 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.861 1 49.861 49.361 50.361 0 0 0 0 0.012522 1 19966 46.352 24.266 3 4462 295 2291 2536 7333 7333 473 QAEEECAHRGSPLPK 15 1 1 Phospho (STY) _QAEEECAHRGS(ph)PLPK_ QAEEECAHRGS(1)PLPK QAEEECAHRGS(63.44)PLPK 0 0 1 1 F2Z2A4;H7C1J2;H7C1M5;Q9H147 F2Z2A4 F2Z2A4 DNTTIP1 Deoxynucleotidyltransferase terminal-interacting protein 1 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 603.2712 3 596.929342 1787.7662 NaN NaN NaN -0.46988 -0.00028049 NaN NaN NaN NaN 19.162 0.38004 19.162 18.982 19.362 0 0 0 0 7.3546E-05 1 6142 63.436 52.177 1 NaN NaN 0 23696000 0 23696000 4463 819 2292 2537 7334 7334 1413 QAGEVTYADAHK 12 1 0 Unmodified _QAGEVTYADAHK_ 0 0 0 0 V9HVZ0;A8K588;Q13247;Q59GY3;A0A0D9SEM4;Q53F45;A8K644;Q08170;Q59EF5 V9HVZ0;A8K644 V9HVZ0 HEL-S-91;SRSF6;SRSF4;SFRS4 Serine/arginine-rich splicing factor 6;Serine/arginine-rich splicing factor 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 430.5426 3 430.542203 1288.60478 93823.2 -0.011539 -4.9679E-06 0.20935 9.0134E-05 0.19781 8.5166E-05 430.542194726083 433.213467806617 61.552 0.31152 61.552 61.35 61.662 0 84 23 6 0 0 0 0.012763 1 28354 34.179 27.741 1 1.376 1.6647 0 17152000 8042700 9108800 4464 474;478 2293 2538 7335 7335 QALAFAPFSPPK 12 1 0 Phospho (STY) _QALAFAPFS(ph)PPK_ QALAFAPFS(1)PPK QALAFAPFS(49.3)PPK 0 0 1 0 A0A0D9SF94;Q86Y97 A0A0D9SF94 A0A0D9SF94 SUV420H2 Histone-lysine N-methyltransferase SUV420H2 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 681.3419 2 677.333771 1352.65299 NaN NaN NaN NaN NaN NaN NaN NaN NaN 129.74 1 129.74 129.24 130.24 0 0 0 0 0.003346 1 83765 49.298 41.373 1 4465 332 2294 2539 7336 7336 524 QDAQSLHGDIPQK 13 1 0 Unmodified _QDAQSLHGDIPQK_ 0 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 482.2473 3 479.575795 1435.70556 87217.14 0.60604 0.00029064 -0.75538 -0.00036226 -0.14935 -7.1623E-05 479.575361986417 482.246976785049 26.622 0.42173 26.622 26.493 26.915 -1.9073E-06 53 20 6 0 0 0 0.0039554 2 12714 41.644 33.733 1 1.0801 0.80145 0 8598900 4455100 4143700 4466 1214 2295 2540 7337;7338 7338 QDEHGYISR 9 0 1 Unmodified _QDEHGYISR_ 0 0 0 0 V9HW43;P04792;B4DL87 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 371.5206 3 368.840472 1103.49959 100068 -0.095064 -3.5063E-05 0.27953 0.0001031 0.18447 6.804E-05 368.840482122573 372.176604108885 65.505 0.39438 65.505 65.326 65.721 0 109 29 5 0 0 0 0.022153 1 31532 35.541 21.335 1 1.1705 1.4393 0 27078000 10921000 16156000 4467 955 2296 2541 7339 7339 QDEQVGLPGK 10 1 0 Unmodified _QDEQVGLPGK_ 0 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 535.7777 2 535.77747 1069.54039 83908.09 0.71973 0.00038562 0.027622 1.4799E-05 0.74735 0.00040042 535.777443340842 539.78449139286 37.265 0.4599 37.265 37.039 37.499 0 144 40 4 0 0 0 0.022296 1 21187 63.816 57.225 1 1.2846 0.95998 0 9630800 4280200 5350600 4468 962 2297 2542 7340 7340 QDQSNVQIAAAPTPEK 16 1 0 Phospho (STY) _QDQSNVQIAAAPT(ph)PEK_ QDQSNVQIAAAPT(1)PEK QDQS(-34.6)NVQIAAAPT(34.6)PEK 0 0 1 0 E9PPJ1;Q8NG31 E9PPJ1 E9PPJ1 CASC5 Protein CASC5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 892.9205 2 888.911831 1775.80911 66052.78 0.76885 0.00068344 0.85341 0.00075861 1.6223 0.001442 889.414762938441 893.420995704315 63.007 0.78009 63.007 62.484 63.264 -3.8147E-06 153 64 4 0 0 0 0.0018256 3 29438 50.188 42.278 2 0.51351 0.61825 0 16235000 9028400 7206700 4469 814 2298 2543 7341;7342;7343 7341 2830 QDQSNVQIAAAPTPEK 16 1 0 Phospho (STY) _QDQSNVQIAAAPT(ph)PEK_ QDQSNVQIAAAPT(1)PEK QDQS(-82.02)NVQIAAAPT(82.02)PEK 0 0 1 0 E9PPJ1;Q8NG31 E9PPJ1 E9PPJ1 CASC5 Protein CASC5 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 888.9127 2 888.911831 1775.80911 64122.75 1.1269 0.0010018 0.11299 0.00010044 1.2399 0.0011022 888.911566431726 892.918884786556 60.134 1.2256 60.134 59.376 60.602 0 643 115 8 0 0 0 5.0618E-16 2 37088 109.54 101.24 2 1.1709 0.77093 0 58422000 25978000 32445000 4470 814 2298 2543 7344;7345 7345 2830 QDSLVINLNR 10 0 1 Phospho (STY) _QDS(ph)LVINLNR_ QDS(1)LVINLNR QDS(101.5)LVINLNR 0 0 1 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 626.3087 2 626.308284 1250.60202 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.91 1 100.91 100.41 101.41 7.6294E-06 0 0 0 0.0010129 1 57914 101.5 77.651 1 4471 1254 2299 2544 7346 7346 2582 QDSLVINLNR 10 0 1 Phospho (STY) _QDS(ph)LVINLNR_ QDS(1)LVINLNR QDS(67.55)LVINLNR 0 0 1 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 631.313 2 626.308284 1250.60202 76753.23 1.1105 0.0006955 -0.29766 -0.00018643 0.81281 0.00050907 626.307921358903 631.312158968049 105.31 1.1085 105.31 104.8 105.91 0 355 102 4 0 0 0 0.0047728 1 67903 67.548 63.008 1 0.90494 0.71546 0 13644000 6902500 6741500 4472 1254 2299 2544 7347 7347 2582 QEAGDSPPPAPGTPK 15 1 0 Phospho (STY) _QEAGDS(ph)PPPAPGTPK_ QEAGDS(1)PPPAPGTPK QEAGDS(34.44)PPPAPGT(-34.44)PK 0 0 1 0 B3KUR4;A4D299;J3KR72;P49848 B3KUR4 B3KUR4 TAF6 Transcription initiation factor TFIID subunit 6 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 769.3483 2 764.837603 1527.66065 72161.23 1.0658 0.00081516 0.19763 0.00015116 1.2634 0.00096632 765.339092213156 768.84527848652 35.49 0.67072 35.49 35.145 35.816 0 219 54 6 0 0 0 0.0020208 1 19972 43.042 36.658 2 0.88653 0.67732 0 11755000 5585800 6169300 4473 417 2300 2545 7348 7348 712 QEAKPQQAAGMLSPK 15 2 0 Oxidation (M),Phospho (STY) _QEAKPQQAAGM(ox)LS(ph)PK_ QEAKPQQAAGM(1)LSPK QEAKPQQAAGMLS(1)PK QEAKPQQAAGM(94.61)LSPK QEAKPQQAAGMLS(94.61)PK 0 1 1 1 J3KQ96;E7ETY2;Q13428;B4DRA2 J3KQ96 J3KQ96 TCOF1 Treacle protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 848.4113 2 840.394762 1678.77497 66122.64 1.1005 0.00092485 0.53244 0.00044746 1.6329 0.0013723 840.395115735344 848.4098158334 25.804 0.4353 25.804 25.617 26.053 1.9073E-06 184 26 9 0 0 0 2.7479E-08 1 11922 94.61 81.182 1 1.037 0.77687 0 89374000 44552000 44822000 4474 792 2301 2546 7349 7349 212 1352 QEESESPVERPLK 13 1 1 Phospho (STY) _QEESES(ph)PVERPLK_ QEES(0.182)ES(0.818)PVERPLK QEES(-6.54)ES(6.54)PVERPLK 0 0 1 1 A0A024RCU9;A8K8B2;H3BLV9;Q96SB4;D6RBF8 A0A024RCU9 A0A024RCU9 SRPK1 SRSF protein kinase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 542.59 3 536.581937 1606.72398 83324.73 0.4279 0.0002296 0.31289 0.00016789 0.74079 0.00039749 536.582081628752 542.589716175367 58.563 0.81253 58.563 58.107 58.92 0 333 64 9 0 0 0 0.0012248 1 25934 66.246 59.355 2 1.877 2.2099 0 42528000 16890000 25638000 4475 218 2302 2547 7350 7350 340 QEESESPVERPLK 13 1 1 Phospho (STY) _QEESES(ph)PVERPLK_ QEES(0.168)ES(0.832)PVERPLK QEES(-6.94)ES(6.94)PVERPLK 0 0 1 1 A0A024RCU9;A8K8B2;H3BLV9;Q96SB4;D6RBF8 A0A024RCU9 A0A024RCU9 SRPK1 SRSF protein kinase 1 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 542.5886 3 536.581937 1606.72398 NaN NaN NaN -1.4307 -0.00076769 NaN NaN NaN NaN 34.204 0.63735 34.204 33.898 34.535 0 0 0 0 0.00035869 1 18827 58.83 39.997 2 NaN NaN 0 14287000 0 14287000 4476 218 2302 2547 7351 7351 340 QEPLEEDSPSSSSAGLDK 18 1 0 Phospho (STY) _QEPLEEDS(ph)PSSSSAGLDK_ QEPLEEDS(0.592)PS(0.109)S(0.109)S(0.086)S(0.104)AGLDK QEPLEEDS(7.34)PS(-7.34)S(-7.34)S(-8.38)S(-7.55)AGLDK 0 0 1 0 C9JCN8;P15408 C9JCN8 C9JCN8 FOSL2 Fos-related antigen 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 982.4126 2 978.409515 1954.80448 62804.07 0.4602 0.00045026 -0.072373 -7.081E-05 0.38782 0.00037945 978.409604679345 982.416545081713 65.653 0.76018 65.653 65.219 65.979 0 248 57 6 0 0 0 0.00013556 2 31335 47.204 41.215 5 0.95884 1.2066 0 29186000 14259000 14926000 4477 739 2303 2548 7352;7353 7352 1244 QESCSPHHPQVLAQQGSGSSPK 22 1 0 Phospho (STY) _QESCSPHHPQVLAQQGSGS(ph)SPK_ QESCSPHHPQVLAQQGS(0.148)GS(0.426)S(0.426)PK QES(-36.1)CS(-32.25)PHHPQVLAQQGS(-4.6)GS(0)S(0)PK 0 0 1 0 Q8N1G0;F8WCX2 Q8N1G0 Q8N1G0 ZNF687 Zinc finger protein 687 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 812.3637 3 809.356672 2425.04819 67859.24 0.48622 0.00039353 0.22804 0.00018456 0.71426 0.00057809 809.691080966879 812.362759970835 23.786 0.5631 23.786 23.539 24.103 1.9073E-06 217 33 10 0 0 0 5.2294E-06 1 10168 43.768 39.74 5 2.7225 1.7929 0 58810000 16081000 42730000 4478 1150 2304 2549 7354 7354 2219;2220 QEYDESGPSIVHR 13 0 1 Unmodified _QEYDESGPSIVHR_ 0 0 0 0 B4E335;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;V9HVZ7;P0CG38;Q96DE1;Q96FU6;L0R5C4;P0CG39;Q9BYX7;B4E3A4;P63261;B4DVQ0;Q6S8J3;A5A3E0 B4E335;B4E3A4 B4E3A4 PS1TP5BP1;ACTB;ACTG1;HEL-176;POTEI;POTEM;POTEJ;POTEKP;POTEE;POTEF Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 506.239 3 506.239072 1515.69539 83762.61 0.30692 0.00015537 -0.1426 -7.2189E-05 0.16432 8.3185E-05 506.239014148968 509.575116015584 74.361 1.5815 74.361 73.402 74.984 0 744 138 8 0 0 0 7.5921E-43 4 38205 128.9 120.99 1 1.834 2.3205 0 324800000 115420000 209380000 4479 683;685 2305 2550 7355;7356;7357;7358 7357 QEYDESGPSIVHR 13 0 1 Unmodified _QEYDESGPSIVHR_ 0 0 0 0 B4E335;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;V9HVZ7;P0CG38;Q96DE1;Q96FU6;L0R5C4;P0CG39;Q9BYX7;B4E3A4;P63261;B4DVQ0;Q6S8J3;A5A3E0 B4E335;B4E3A4 B4E3A4 PS1TP5BP1;ACTB;ACTG1;HEL-176;POTEI;POTEM;POTEJ;POTEKP;POTEE;POTEF Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 758.8564 2 758.854969 1515.69539 69858.71 0.77572 0.00058866 0.21201 0.00016088 0.98773 0.00074955 758.855026119673 763.859627862345 74.372 0.73568 74.372 73.927 74.663 0 233 62 5 0 0 0 0.00044292 3 37928 84.658 60.628 1 1.8364 2.2841 0 36710000 12680000 24030000 4480 683;685 2305 2550 7359;7360;7361 7361 QGPPCSDSEEEVERK 15 1 1 2 Phospho (STY) _QGPPCS(ph)DS(ph)EEEVERK_ QGPPCS(1)DS(1)EEEVERK QGPPCS(42.03)DS(42.03)EEEVERK 0 0 2 1 E9PPY3;O43159 E9PPY3 E9PPY3 RRP8 Ribosomal RNA-processing protein 8 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 954.3516 2 953.849928 1905.6853 61830.56 0.74868 0.00071413 -0.12993 -0.00012394 0.61874 0.00059019 953.850293644139 962.861201884481 26.512 0.70179 26.512 26.068 26.77 0 161 32 8 0 0 0 0.00070871 1 12506 42.031 30.591 1 0.61651 0.47517 0 39843000 26603000 13240000 4481 815 2306 2551 7362 7362 1408;1409 QGSITSPQANEQSVTPQR 18 0 1 Phospho (STY) _QGS(ph)ITSPQANEQSVTPQR_ QGS(0.391)IT(0.304)S(0.304)PQANEQSVTPQR QGS(1.09)IT(-1.09)S(-1.09)PQANEQS(-29.59)VT(-36.55)PQR 0 0 1 0 A0A140VK53;Q9UQ35;I3L4D8;I3L182;Q9UQ39 A0A140VK53 A0A140VK53 SRRM2 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1004.9592 2 1004.46021 2006.90586 62794.4 0.27676 0.00027799 0.56023 0.00056273 0.83699 0.00084073 1004.96167289701 1009.46531434252 58.94 0.66261 58.94 58.683 59.345 0 202 52 6 0 0 0 0.00050269 1 26200 41.644 41.644 5 0.92679 1.0876 0 13564000 7525500 6038200 4482 383 2307 2552 7363 7363 619 QIALASRSHQDAK 13 1 1 Phospho (STY) _QIALASRS(ph)HQDAK_ QIALAS(0.419)RS(0.581)HQDAK QIALAS(-1.41)RS(1.41)HQDAK 0 0 1 1 Q4VXL8;O95359 Q4VXL8 Q4VXL8 TACC2 Transforming acidic coiled-coil-containing protein 2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 761.8794 2 752.867029 1503.71951 NaN NaN NaN -2.0196 -0.0015205 NaN NaN NaN NaN 67.634 0.12219 67.634 67.573 67.696 0 0 0 0 0.026689 1 33303 42.001 9.9925 2 NaN NaN 0 5747200 0 5747200 4483 946 2308 2553 7364 7364 1637 QIDSSEEDDDEEDYDNDK 18 1 0 2 Phospho (STY) _QIDS(ph)S(ph)EEDDDEEDYDNDK_ QIDS(1)S(1)EEDDDEEDYDNDK QIDS(42.73)S(42.73)EEDDDEEDY(-42.73)DNDK 0 0 2 0 O14646 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1160.8643 2 1160.86233 2319.71012 NaN NaN NaN NaN NaN NaN NaN NaN NaN 44.628 1 44.628 44.128 45.128 -3.8147E-06 0 0 0 0.0016367 1 16571 51.546 46.655 3 4484 919 2309 2554 7365 7365 1543;1544 QILIACSPVSSVR 13 0 1 Phospho (STY) _QILIACS(ph)PVSSVR_ QILIACS(0.904)PVS(0.038)S(0.058)VR QILIACS(11.94)PVS(-13.8)S(-11.94)VR 0 0 1 0 Q5QJE6;J3KP30;B7Z854;E9PRB3 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 760.3845 2 755.378384 1508.74221 70122.87 1.5395 0.0011629 -0.59823 -0.00045189 0.94131 0.00071104 755.879562559401 760.382282622726 101.84 0.83169 101.84 101.41 102.25 7.6294E-06 310 70 6 0 0 0 4.1376E-05 1 58739 89.466 53.955 3 0.7405 0.9134 0 32533000 19157000 13376000 4485 1097 2310 2555 7366 7366 2071 QILIACSPVSSVR 13 0 1 Phospho (STY) _QILIACS(ph)PVSSVR_ QILIACS(0.937)PVS(0.05)S(0.012)VR QILIACS(12.69)PVS(-12.69)S(-18.78)VR 0 0 1 0 Q5QJE6;J3KP30;B7Z854;E9PRB3 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 760.3825 2 755.378384 1508.74221 NaN NaN NaN NaN NaN NaN NaN NaN NaN 126.6 1 126.6 126.1 127.1 0 0 0 0 0.00042381 1 76761 55.724 33.851 3 4486 1097 2310 2555 7367 7367 2071 QILIACSPVSSVR 13 0 1 Phospho (STY) _QILIACS(ph)PVSSVR_ QILIACS(0.942)PVS(0.047)S(0.011)VR QILIACS(13.04)PVS(-13.04)S(-19.31)VR 0 0 1 0 Q5QJE6;J3KP30;B7Z854;E9PRB3 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 755.3805 2 755.378384 1508.74221 NaN NaN NaN NaN NaN NaN NaN NaN NaN 126.67 1 126.67 126.17 127.17 0 0 0 0 0.00031037 1 76811 58.32 36.234 3 4487 1097 2310 2555 7368 7368 2071 QILIACSPVSSVR 13 0 1 Phospho (STY) _QILIACS(ph)PVSSVR_ QILIACS(0.897)PVS(0.041)S(0.062)VR QILIACS(11.6)PVS(-13.38)S(-11.6)VR 0 0 1 0 Q5QJE6;J3KP30;B7Z854;E9PRB3 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 755.3785 2 755.378384 1508.74221 68998.61 1.0972 0.00082883 0.088788 6.7069E-05 1.186 0.00089589 755.377820238698 760.382622503101 107.23 1.1166 107.23 106.79 107.91 0 600 105 8 0 0 0 0.0006568 1 69027 74.789 53.56 3 1.2425 0.85892 0 42631000 19387000 23244000 4488 1097 2310 2555 7369 7369 2071 QIVGTPVNSEDSDTR 15 0 1 Phospho (STY) _QIVGT(ph)PVNSEDSDTR_ QIVGT(0.998)PVNS(0.001)EDS(0.001)DTR QIVGT(28.92)PVNS(-28.92)EDS(-32.72)DT(-37.56)R 0 0 1 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 849.3749 2 849.372538 1696.73052 65764.16 1.237 0.0010506 0.26161 0.0002222 1.4986 0.0012728 849.372807505289 854.376571420918 51.486 1.1321 51.486 51.008 52.14 0 594 100 9 0 0 0 0.0079993 3 31006 61.444 52.393 4 1.2434 0.92374 0 22468000 10592000 11876000 4489 1097 2311 2556 7370;7371;7372 7371 2942 QKSDAEEDGGTVSQEEEDRKPK 22 3 1 2 Phospho (STY) _QKS(ph)DAEEDGGTVS(ph)QEEEDRKPK_ QKS(1)DAEEDGGT(0.015)VS(0.985)QEEEDRKPK QKS(93.96)DAEEDGGT(-18.29)VS(18.29)QEEEDRKPK 0 0 2 3 P27824 P27824 P27824 CANX Calnexin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 656.7709 4 656.270559 2621.05313 74428.07 1.0444 0.00068541 -0.36063 -0.00023667 0.68377 0.00044874 656.521077532529 664.783252213489 17.978 0.35003 17.978 17.873 18.223 0 86 14 10 0 0 0 6.0879E-30 1 5147 104.14 104.14 3 0.35833 0.3831 0 48851000 32454000 16397000 4490 979 2312 2557 7373 7373 1732;1733 QLLFEDTSLTFGTSSR 16 0 1 Phospho (STY) _QLLFEDT(ph)SLTFGTSSR_ QLLFEDT(0.628)S(0.353)LT(0.019)FGTSSR QLLFEDT(2.5)S(-2.5)LT(-15.22)FGT(-33.89)S(-36.21)S(-36.21)R 0 0 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 946.4399 2 941.435138 1880.85572 62532.23 0.96949 0.00091271 -0.33184 -0.00031241 0.63765 0.0006003 941.434830173337 946.438903018649 126.77 0.97266 126.77 126.3 127.27 7.6294E-06 471 87 8 0 0 0 3.2921E-21 2 76729 114.27 114.27 6 0.66116 0.81286 0 28108000 18072000 10036000 4491 1167 2313 2558 7374;7375 7374 2966 QLSSGVSEIR 10 0 1 Phospho (STY) _QLS(ph)SGVSEIR_ QLS(0.865)S(0.134)GVS(0.001)EIR QLS(8.08)S(-8.08)GVS(-29.76)EIR 0 0 1 0 V9HW43;P04792;B4DL87;F8WE04 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 578.2744 2 578.27391 1154.53327 NaN NaN NaN 0.021424 1.2389E-05 NaN NaN NaN NaN 68.885 1.2509 68.885 68.104 69.355 0 0 0 0 0.0012524 2 34334 70.488 43.702 3 NaN NaN 0 16786000 16786000 0 4492 955 2314 2559 7376;7377 7377 1668 QLSSGVSEIR 10 0 1 Phospho (STY) _QLS(ph)SGVSEIR_ QLS(0.799)S(0.2)GVS(0.001)EIR QLS(6.01)S(-6.01)GVS(-29.57)EIR 0 0 1 0 V9HW43;P04792;B4DL87;F8WE04 V9HW43 V9HW43 HEL-S-102;HSPB1 Heat shock protein beta-1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 578.2746 2 578.27391 1154.53327 80589.86 0.73721 0.00042631 0.076882 4.4459E-05 0.81409 0.00047077 578.273931995936 583.277976653147 66.181 1.6561 66.181 65.194 66.85 0 547 150 5 0 0 0 0.00074787 4 41572 83.137 67.475 3 0.90495 0.65033 0 28061000 14543000 13518000 4493 955 2314 2559 7378;7379;7380;7381 7380 1668 QLTQTTHTDKVPGDEDK 17 2 0 Unmodified _QLTQTTHTDKVPGDEDK_ 0 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 483.2442 4 478.986626 1911.9174 86682.52 0.41303 0.00019783 -0.11494 -5.5056E-05 0.29808 0.00014278 478.986506524549 482.99361403075 19.663 0.2119 19.663 19.574 19.786 0 42 8 8 0 0 0 0.012036 1 6642 23.683 19.44 1 3.7026 2.9048 0 8310700 1207100 7103600 4494 994 2315 2560 7382 7382 QNSDDEEQPQLSDEEK 16 1 0 2 Phospho (STY) _QNS(ph)DDEEQPQLS(ph)DEEK_ QNS(1)DDEEQPQLS(1)DEEK QNS(41.42)DDEEQPQLS(41.42)DEEK 0 0 2 0 Q8WVC0 Q8WVC0 Q8WVC0 LEO1 RNA polymerase-associated protein LEO1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1029.8694 2 1025.86174 2049.70893 NaN NaN NaN NaN NaN NaN NaN NaN NaN 45.106 1 45.106 44.606 45.606 0 0 0 0 0.0050878 1 16866 41.422 32.234 1 4495 1166 2316 2561 7383 7383 2254;2255 QNSTLVGDKRSDPEQNEK 18 2 1 Phospho (STY) _QNSTLVGDKRS(ph)DPEQNEK_ QNS(0.002)T(0.014)LVGDKRS(0.984)DPEQNEK QNS(-26.43)T(-18.48)LVGDKRS(18.48)DPEQNEK 0 0 1 2 A0A024R9G7;Q6PL18;A0A0B4J211 A0A024R9G7 A0A024R9G7 ATAD2 ATPase family AAA domain-containing protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 717.6699 3 708.990095 2123.94846 71435.21 0.82695 0.0005863 0.3694 0.0002619 1.1964 0.0008482 709.32455533298 717.669391467606 18.6 0.29603 18.6 18.475 18.771 0 85 13 9 0 0 0 2.5033E-05 2 5716 49.993 41.174 3 1.0215 0.85039 0 27740000 13484000 14256000 4496 166 2317 2562 7384;7385 7385 260 QQDLHLESPQR 11 0 1 Phospho (STY) _QQDLHLES(ph)PQR_ QQDLHLES(1)PQR QQDLHLES(63.13)PQR 0 0 1 0 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 477.5523 3 477.552312 1429.63511 NaN NaN NaN -0.17623 -8.4159E-05 NaN NaN NaN NaN 63.711 0.55832 63.711 63.48 64.038 0 0 0 0 0.0034164 1 30040 63.128 51.105 1 NaN NaN 0 26692000 26692000 0 4497 1207 2318 2563 7386 7386 2410 QQDLHLESPQR 11 0 1 Phospho (STY) _QQDLHLES(ph)PQR_ QQDLHLES(1)PQR QQDLHLES(47.55)PQR 0 0 1 0 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 477.5525 3 477.552312 1429.63511 86016.16 0.60555 0.00028918 -0.08299 -3.9632E-05 0.52256 0.00024955 477.552231385109 480.888254408689 38.853 0.86541 38.853 38.533 39.398 0 359 76 8 0 0 0 0.0058 1 22265 47.545 40.847 1 0.48728 0.34482 0 31111000 20955000 10156000 4498 1207 2318 2563 7387 7387 2410 QQFILTSPDGAGTGK 15 1 0 Phospho (STY) _QQFILTS(ph)PDGAGTGK_ QQFILT(0.273)S(0.675)PDGAGT(0.052)GK QQFILT(-3.93)S(3.93)PDGAGT(-11.15)GK 0 0 1 0 C9JKS0;F2YGU2;P49116;C9JMI6 C9JKS0 C9JKS0 NR2C2 Nuclear receptor subfamily 2 group C member 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 800.8762 2 800.374353 1598.73415 77712.52 0.88457 0.00070798 0.73445 0.00058783 1.619 0.0012958 800.875700222161 804.382598841117 93.908 0.26824 93.908 93.78 94.048 0 56 23 5 0 0 0 0.0013948 1 60480 45.332 34.673 3 1.1313 0.88455 0 7100100 4118700 2981400 4499 742 2319 2564 7388 7388 1253 QSFDDNDSEELEDK 14 1 0 Phospho (STY) _QSFDDNDS(ph)EELEDK_ QSFDDNDS(1)EELEDK QS(-36.63)FDDNDS(36.63)EELEDK 0 0 1 0 A0JLR8;Q05CQ1;Q8N5A0;A0A087WUT6;O60841 A0JLR8 A0JLR8 EIF5B Eukaryotic translation initiation factor 5B ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 879.8289 2 875.820001 1749.62545 NaN NaN NaN 0.29082 0.0002547 NaN NaN NaN NaN 59.816 0.64699 59.816 59.454 60.101 0 0 0 0 0.00026062 1 26832 60.918 48.773 2 NaN NaN 0 8062800 0 8062800 4500 248 2320 2565 7389 7389 392 QSLGHGQHGSGSGQSPSPSR 20 0 1 Unmodified _QSLGHGQHGSGSGQSPSPSR_ 0 0 0 0 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 CON__Q86YZ3 HRNR Hornerin ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 649.9719 3 649.972047 1946.89431 NaN NaN NaN -0.36593 -0.00023784 NaN NaN NaN NaN 64.82 0.20164 64.82 64.706 64.908 0 0 0 0 0.0020354 1 30948 45.413 35.037 1 NaN NaN 0 7637400 7637400 0 + 4501 761 2321 2566 7390 7390 QSPLSVQSVVK 11 1 0 Phospho (STY) _QS(ph)PLSVQSVVK_ QS(0.997)PLS(0.003)VQSVVK QS(25.39)PLS(-25.39)VQS(-37.35)VVK 0 0 1 0 O96028;D6R9V2;D6RIS1;D6RFE7 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 626.3214 2 626.32086 1250.62717 77367.89 0.81031 0.00050752 -0.065833 -4.1233E-05 0.74448 0.00046628 626.320862892265 630.327960315212 94.077 0.34921 94.077 93.873 94.222 0 122 31 6 0 0 0 0.017686 2 60563 42.835 25.621 3 1.9921 1.5515 0 13101000 4332000 8769400 4502 953 2322 2567 7391;7392 7391 1656 QSVENDIHGLRK 12 1 1 Unmodified _QSVENDIHGLRK_ 0 0 0 1 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 465.9167 3 465.916152 1394.72663 NaN NaN NaN 0.16621 7.7441E-05 NaN NaN NaN NaN 94.531 1.1932 94.531 93.742 94.936 0 0 0 0 0.028698 1 52636 29.341 12.808 1 NaN NaN 0 29615000 29615000 0 4503 186 2323 2568 7393 7393 QSVENDIHGLRK 12 1 1 Unmodified _QSVENDIHGLRK_ 0 0 0 1 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 471.9237 3 465.916152 1394.72663 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.245 1 94.245 93.745 94.745 0 0 0 0 0.0029428 1 52719 51.211 39.998 1 4504 186 2323 2568 7394 7394 QVHPDTGISSK 11 1 0 Unmodified _QVHPDTGISSK_ 0 0 0 0 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;P57053;Q96A08;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257 B2R4S9;A0A024RCJ2 B2R4S9 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS;HIST1H2BA;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 392.8746 3 390.20341 1167.5884 94726.02 -0.20645 -8.0558E-05 -0.26117 -0.00010191 -0.46762 -0.00018247 390.203434805472 392.874775962379 64.364 1.431 64.364 63.895 65.326 0 622 102 10 0 0 0 0.00011758 3 30966 88.155 75.579 1 0.91611 1.128 0 2328700000 1193700000 1135000000 4505 21;211 2324 2569 7395;7396;7397 7397 QVHPDTGISSK 11 1 0 Unmodified _QVHPDTGISSK_ 0 0 0 0 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;P57053;Q96A08;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257 B2R4S9;A0A024RCJ2 B2R4S9 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS;HIST1H2BA;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 584.8019 2 584.801477 1167.5884 79381.23 0.71442 0.0004178 -0.089679 -5.2444E-05 0.62474 0.00036535 584.801434281721 588.808486313182 64.363 0.97467 64.363 64.077 65.052 0 431 69 9 0 0 0 4.2263E-45 2 30499 198.62 133.38 1 0.82943 1.0235 0 876190000 472880000 403300000 4506 21;211 2324 2569 7398;7399 7398 QVHPDTGISSK 11 1 0 Unmodified _QVHPDTGISSK_ 0 0 0 0 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;P57053;Q96A08;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257 B2R4S9;A0A024RCJ2 B2R4S9 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS;HIST1H2BA;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 584.8022 2 584.801477 1167.5884 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.455 1 77.455 76.955 77.955 0 0 0 0 0.0035707 1 40379 60.019 13.593 1 4507 21;211 2324 2569 7400 7400 QVHPDTGISSK 11 1 0 Unmodified _QVHPDTGISSK_ 0 0 0 0 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;P57053;Q96A08;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257 B2R4S9;A0A024RCJ2 B2R4S9 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS;HIST1H2BA;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 390.2032 3 390.20341 1167.5884 95962.52 0.1739 6.7858E-05 0.018384 7.1735E-06 0.19229 7.5031E-05 390.203400527392 392.874795237716 17.835 0.24402 17.835 17.701 17.945 0 50 9 8 0 0 0 8.426E-09 2 5005 103.69 81.045 1 0.78208 0.50742 0 35233000 20047000 15186000 4508 21;211 2324 2569 7401;7402 7401 QVHPDTGISSK 11 1 0 Unmodified _QVHPDTGISSK_ 0 0 0 0 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;P57053;Q96A08;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257 B2R4S9;A0A024RCJ2 B2R4S9 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS;HIST1H2BA;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 584.8021 2 584.801477 1167.5884 78564.18 0.72266 0.00042261 0.22775 0.00013319 0.95042 0.00055581 584.801604953863 588.808693708424 17.837 0.26703 17.837 17.678 17.945 0 49 10 8 0 0 0 0.02049 1 5020 81.95 58.879 1 0.81747 0.53006 0 34359000 19370000 14989000 4509 21;211 2324 2569 7403 7403 RAEGAIAGFR 10 0 2 Unmodified _RAEGAIAGFR_ 0 0 0 1 A0A087X1U6;P58107;A0A075B730 A0A087X1U6 A0A087X1U6 EPPK1 Epiplakin ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 534.2964 2 524.28834 1046.56213 NaN NaN NaN -0.68472 -0.00035899 NaN NaN NaN NaN 95.853 0.16089 95.853 95.766 95.927 0 0 0 0 0.013848 1 53945 52.167 36.525 1 NaN NaN 0 6376900 0 6376900 4510 273 2325 2570 7404 7404 RAFDSAVAK 9 1 1 Unmodified _RAFDSAVAK_ 0 0 0 1 B4DS66;B4DKR1;Q16891;C9J406;B9A067;B4DQY2;H7C463;B4DT20 B4DS66 B4DS66 IMMT MICOS complex subunit MIC60 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 482.2472 2 482.764166 963.513779 90288.45 0.37077 0.000179 0.0041953 2.0253E-06 0.37497 0.00018102 482.764043413043 491.775219680043 76.782 0.6634 76.782 76.328 76.991 0 122 55 4 0 0 0 0.020622 1 39720 36.381 36.381 1 1.1142 1.2649 0 21482000 9240800 12241000 4511 630 2326 2571 7405 7405 RAFLIEEQK 9 1 1 Unmodified _RAFLIEEQK_ 0 0 0 1 A0A024RDH8;P49207;Q5MK14 A0A024RDH8 A0A024RDH8 RPL34 60S ribosomal protein L34 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 576.3311 2 567.319306 1132.62406 80249.63 1.2708 0.00072094 -0.10717 -6.0802E-05 1.1636 0.00066013 567.319125284844 576.330463290843 102.3 1.604 102.3 101.35 102.95 0 685 128 8 0 0 0 0.00018595 2 58876 105.2 42.649 1 0.88831 1.0685 0 174850000 94863000 79989000 4512 228 2327 2572 7406;7407 7407 RAGAPVGGSPGLAK 14 1 1 Phospho (STY) _RAGAPVGGS(ph)PGLAK_ RAGAPVGGS(1)PGLAK RAGAPVGGS(49.99)PGLAK 0 0 1 1 A0A0A0MS59;Q6ZRS2;A0A0C4DFX4 A0A0A0MS59 A0A0A0MS59 SRCAP Helicase SRCAP MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 668.3492 2 659.337376 1316.6602 74980.12 1.1858 0.00078187 -0.041553 -2.7398E-05 1.1443 0.00075447 659.337222375607 668.348704068864 32.972 1.1075 32.972 32.519 33.626 0 407 84 7 0 0 0 0.0012424 1 17820 49.988 31.676 1 0.95082 0.73304 0 47081000 24843000 22237000 4513 292 2328 2573 7408 7408 464 RAGELTEDEVER 12 0 2 Unmodified _RAGELTEDEVER_ 0 0 0 1 P62269 P62269 P62269 RPS18 40S ribosomal protein S18 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 702.3425 2 702.341694 1402.66884 72327.16 0.91474 0.00064246 0.033075 2.323E-05 0.94782 0.00066569 702.341590556213 712.349980058471 76.6 0.69881 76.6 76.292 76.991 0 355 58 8 0 0 0 1.3821E-09 2 39646 130.1 101.7 1 1.1196 1.3974 0 189990000 91193000 98797000 4514 1018 2329 2574 7409;7410 7410 RAGELTEDEVER 12 0 2 Unmodified _RAGELTEDEVER_ 0 0 0 1 P62269 P62269 P62269 RPS18 40S ribosomal protein S18 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 475.2361 3 468.563555 1402.66884 87118.96 0.3424 0.00016044 0.016874 7.9063E-06 0.35928 0.00016834 468.563567757019 475.235669624541 76.631 0.72579 76.631 76.316 77.042 7.6294E-06 323 61 7 0 0 0 4.9962E-20 2 39669 131.06 121.63 1 1.0843 1.3538 0 205300000 92622000 112680000 4515 1018 2329 2574 7411;7412 7412 RAGELTEDEVER 12 0 2 Unmodified _RAGELTEDEVER_ 0 0 0 1 P62269 P62269 P62269 RPS18 40S ribosomal protein S18 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 468.5641 3 468.563555 1402.66884 90585.55 0.53698 0.00025161 -0.63945 -0.00029962 -0.10247 -4.8016E-05 468.563495935947 475.23526774213 26.487 0.39973 26.487 26.223 26.623 0 44 16 4 0 0 0 0.0065707 2 12629 39.746 36.425 1 1.0499 0.95648 0 5736800 2293000 3443800 4516 1018 2329 2574 7413;7414 7414 RALASNTSFFSGCSPIEEEAH 21 0 1 Phospho (STY) _RALASNTSFFSGCS(ph)PIEEEAH_ RALASNTSFFSGCS(1)PIEEEAH RALAS(-105.42)NT(-95.08)S(-95.08)FFS(-56.37)GCS(56.37)PIEEEAH 0 0 1 1 Q59HG1;O95239;B3KNC0;Q2VIQ3;B4DYE2 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 801.0132 3 797.34214 2389.00459 66225.97 1.0979 0.00087544 -0.14714 -0.00011732 0.95081 0.00075812 797.676252241565 800.678014872253 108.12 1.9908 108.12 107.33 109.32 0 1465 155 15 0 0 0 1.7176E-76 4 63465 150.13 143.9 5 0.86924 1.1012 0 675470000 361290000 314180000 4517 944 2330 2575 7415;7416;7417;7418 7417 1625 RALASNTSFFSGCSPIEEEAH 21 0 1 Phospho (STY) _RALASNTSFFSGCS(ph)PIEEEAH_ RALAS(0.098)NT(0.098)S(0.098)FFS(0.098)GCS(0.607)PIEEEAH RALAS(-7.91)NT(-7.91)S(-7.91)FFS(-7.91)GCS(7.91)PIEEEAH 0 0 1 1 Q59HG1;O95239;B3KNC0;Q2VIQ3;B4DYE2 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1196.4977 2 1195.50957 2389.00459 NaN NaN NaN -3.6531 -0.0043673 NaN NaN NaN NaN 108.09 0.93655 108.09 107.5 108.44 0 0 0 0 3.3038E-09 2 63160 59.198 49.665 5 NaN NaN 0 118740000 118740000 0 4518 944 2330 2575 7419;7420 7420 1625 RALASNTSFFSGCSPIEEEAH 21 0 1 Phospho (STY) _RALASNTSFFSGCS(ph)PIEEEAH_ RALASNTSFFS(0.002)GCS(0.998)PIEEEAH RALAS(-48.72)NT(-49.12)S(-49.5)FFS(-27.84)GCS(27.84)PIEEEAH 0 0 1 1 Q59HG1;O95239;B3KNC0;Q2VIQ3;B4DYE2 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 797.6776 3 797.34214 2389.00459 67177.67 1.1716 0.00093419 -0.37613 -0.0002999 0.7955 0.00063429 797.676658661239 801.012138460922 104.72 2.6332 104.72 103.79 106.42 0 2146 251 14 0 0 0 6.3785E-13 1 67019 67.217 67.217 5 1.4858 0.95409 0 970970000 392840000 578130000 4519 944 2330 2575 7421 7421 1625 RALASNTSFFSGCSPIEEEAH 21 0 1 Phospho (STY) _RALASNTSFFSGCS(ph)PIEEEAH_ RALAS(0.003)NT(0.003)S(0.007)FFS(0.133)GCS(0.855)PIEEEAH RALAS(-25.28)NT(-24.91)S(-20.91)FFS(-8.08)GCS(8.08)PIEEEAH 0 0 1 1 Q59HG1;O95239;B3KNC0;Q2VIQ3;B4DYE2 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1196.0111 2 1195.50957 2389.00459 NaN NaN NaN 0.23735 0.00028376 NaN NaN NaN NaN 104.68 1.5756 104.68 104.12 105.69 0 0 0 0 2.9235E-09 1 67631 60.178 50.429 5 NaN NaN 0 133060000 133060000 0 4520 944 2330 2575 7422 7422 1625 RALEQQVEEMK 11 1 1 Oxidation (M) _RALEQQVEEM(ox)K_ RALEQQVEEM(1)K RALEQQVEEM(60.52)K 0 1 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 697.8568 2 688.845558 1375.67656 NaN NaN NaN -0.070504 -4.8566E-05 NaN NaN NaN NaN 71.381 0.53262 71.381 71.058 71.59 0 0 0 0 0.0021144 1 35740 60.518 43.576 1 NaN NaN 0 8246600 0 8246600 4521 49 2331 2576 7423 7423 11 RALERDPTEDDVESK 15 1 2 Unmodified _RALERDPTEDDVESK_ 0 0 0 2 A0A024R7K7;A0A024R7M6;Q86YP4;C9JMI3;C9JGN4;C9JHD7;C9JJK9;V9GYX5;C9JVY3;V9GY85;H7C3H1 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 587.6213 3 587.28675 1758.83842 NaN NaN NaN -0.19778 -0.00011615 NaN NaN NaN NaN 80.934 0.37394 80.934 80.756 81.13 0 0 0 0 0.0013122 1 42987 47.545 24.126 1 NaN NaN 0 14440000 14440000 0 4522 136 2332 2577 7424 7424 RALLETASPRK 11 1 2 Phospho (STY) _RALLETAS(ph)PRK_ RALLET(0.022)AS(0.978)PRK RALLET(-16.49)AS(16.49)PRK 0 0 1 2 B3KPB2;A8K662;Q96BT3;H3BMP6;H3BQS6;H3BN05;H3BTS2;H3BQJ0;I3L4F8;H3BUW2;H3BTR4 B3KPB2 B3KPB2 CENPT Centromere protein T MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 441.238 3 441.237776 1320.6915 89132.9 0.24059 0.00010616 -0.25463 -0.00011235 -0.014039 -6.1947E-06 441.237656549597 450.581219028527 25.649 0.49742 25.649 25.381 25.879 1.9073E-06 139 28 7 0 0 0 0.0035241 1 11778 50.102 47.235 2 0.69906 0.65405 0 31024000 17316000 13708000 4523 479 2333 2578 7425 7425 831;2748 RALVEFESNPEETREPGSPPSVQR 24 0 3 Phospho (STY) _RALVEFESNPEET(ph)REPGSPPSVQR_ RALVEFES(0.008)NPEET(0.493)REPGS(0.493)PPS(0.007)VQR RALVEFES(-18.15)NPEET(0)REPGS(0)PPS(-18.46)VQR 0 0 1 2 Q9H6F5;H0YG79 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 706.0887 4 698.581627 2790.2974 72561.05 0.92025 0.00064287 -0.065488 -4.5749E-05 0.85476 0.00059712 698.581384311269 706.338567300346 103.94 1.0553 103.94 103.48 104.54 0 344 79 8 0 0 0 2.4453E-08 1 59959 52.061 44.785 4 0.71902 0.83609 0 44514000 29882000 14633000 4524 1207 2334 2579 7426 7426 2408;2409;2986 RAPFDLFENK 10 1 1 Unmodified _RAPFDLFENK_ 0 0 0 1 A0A024RD80;P08238;B4DMA2;B4DGL0;Q58FF7 A0A024RD80 A0A024RD80 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 627.8335 2 618.822212 1235.62987 80164.82 0.59145 0.000366 -0.20339 -0.00012586 0.38806 0.00024014 619.322443710207 627.833317758482 132.19 0.39603 132.19 131.92 132.31 0 68 34 4 0 0 0 0.029379 1 80343 53.751 39.077 1 2.216 2.3802 0 5384900 2009500 3375400 4525 223 2335 2580 7427 7427 RAPFDLFENK 10 1 1 Unmodified _RAPFDLFENK_ 0 0 0 1 A0A024RD80;P08238;B4DMA2;B4DGL0;Q58FF7 A0A024RD80 A0A024RD80 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 618.8223 2 618.822212 1235.62987 78853.3 0.60275 0.000373 0.40678 0.00025172 1.0095 0.00062472 618.822236909491 627.833500658411 145.89 0.55614 145.89 145.47 146.03 0 104 26 6 0 0 0 0.028663 2 84032 54.416 54.416 1 2.2489 2.414 0 4298800 1043500 3255200 4526 223 2335 2580 7428;7429 7429 RAPFDLFENK 10 1 1 Unmodified _RAPFDLFENK_ 0 0 0 1 A0A024RD80;P08238;B4DMA2;B4DGL0;Q58FF7 A0A024RD80 A0A024RD80 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 627.834 2 618.822212 1235.62987 NaN NaN NaN 0.077718 4.8093E-05 NaN NaN NaN NaN 131.11 1.5138 131.11 130.4 131.92 0 0 0 0 5.4836E-07 2 79875 94.692 60.895 1 NaN NaN 0 9652700 0 9652700 4527 223 2335 2580 7430;7431 7431 RAPFDLFENK 10 1 1 Unmodified _RAPFDLFENK_ 0 0 0 1 A0A024RD80;P08238;B4DMA2;B4DGL0;Q58FF7 A0A024RD80 A0A024RD80 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 627.8339 2 618.822212 1235.62987 NaN NaN NaN -0.33225 -0.00020561 NaN NaN NaN NaN 132.62 0.70486 132.62 132.25 132.95 0 0 0 0 0.012643 1 80865 55.461 27.287 1 NaN NaN 0 2033600 0 2033600 4528 223 2335 2580 7432 7432 RAPSSPVAKPGPVK 14 2 1 Phospho (STY) _RAPS(ph)SPVAKPGPVK_ RAPS(0.5)S(0.5)PVAKPGPVK RAPS(0)S(0)PVAKPGPVK 0 0 1 2 A0A0C4DG31;Q9GZR2 A0A0C4DG31 A0A0C4DG31 REXO4 RNA exonuclease 4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 499.6118 3 490.932464 1469.77556 84886.67 0.20703 0.00010164 0.1283 6.2984E-05 0.33533 0.00016462 490.932431886279 499.611467397239 20.859 0.41271 20.859 20.662 21.075 0 120 19 8 0 0 0 0.00083644 2 7590 55.851 50.478 2 1.079 0.88816 0 57043000 28208000 28835000 4529 317 2336 2581 7433;7434 7433 499;500 RASPPDPSPSPSAASASER 19 0 2 3 Phospho (STY) _RAS(ph)PPDPS(ph)PS(ph)PSAASASER_ RAS(0.999)PPDPS(0.942)PS(0.319)PS(0.318)AAS(0.232)AS(0.189)ER RAS(32.07)PPDPS(14.3)PS(0.07)PS(-0.07)AAS(-1.6)AS(-2.57)ER 0 0 3 1 Q9Y2F5 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1063.9095 2 1053.90016 2105.78576 59841.82 0.45734 0.00048199 0.019733 2.0797E-05 0.47707 0.00050279 1053.90019646675 1063.90870922544 45.609 0.84791 45.609 45.21 46.058 0 349 60 8 0 0 0 4.9956E-05 1 17052 42.711 33.428 20 0.5925 0.70394 0 12370000 7591300 4778400 4530 1246 2337 2582 7435 7435 2555;2556;2557 RASPPDPSPSPSAASASER 19 0 2 Phospho (STY) _RAS(ph)PPDPSPSPSAASASER_ RAS(0.871)PPDPS(0.128)PS(0.001)PSAASASER RAS(8.32)PPDPS(-8.32)PS(-30.83)PS(-44.89)AAS(-49.46)AS(-49.7)ER 0 0 1 1 Q9Y2F5 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 656.2976 3 649.624976 1945.8531 74777.85 1.2025 0.00078114 0.12159 7.8987E-05 1.324 0.00086013 649.62489632313 656.297232686787 34.529 1.5626 34.529 33.981 35.543 -3.8147E-06 597 124 8 0 0 0 1.3759E-05 2 19360 49.765 49.765 6 0.97804 0.84828 0 52155000 25759000 26395000 4531 1246 2337 2583 7436;7437 7437 2555;2556;2557 RASQEANLLTLAQK 14 1 1 Phospho (STY) _RAS(ph)QEANLLTLAQK_ RAS(1)QEANLLTLAQK RAS(39.01)QEANLLT(-39.01)LAQK 0 0 1 1 A0A0A0MSU2;A0PJD3;A0A024R689;A0A1C7CYX1;Q6PJG2;H7C1L3 A0A0A0MSU2 A0A0A0MSU2 ELMSAN1;C14orf43 ELM2 and SANT domain-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 820.9291 2 811.916719 1621.81888 68739.84 1.1185 0.00090817 0.3203 0.00026006 1.4388 0.0011682 811.916818041163 820.928488791518 105.31 0.81749 105.31 104.96 105.78 0 257 55 6 0 0 0 2.7093E-06 3 61245 85.493 49.068 2 0.51403 0.595 0 27669000 17444000 10226000 4532 120 2338 2584 7438;7439;7440 7439 174 RAYDIAGSTK 10 1 1 Unmodified _RAYDIAGSTK_ 0 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 541.2847 2 541.285463 1080.55637 82107.7 0.64942 0.00035152 -0.24011 -0.00012997 0.40931 0.00022155 541.28529322853 550.296506249007 75.847 0.83873 75.847 75.236 76.075 7.6294E-06 247 71 4 0 0 0 7.4729E-06 2 38799 115.78 58.5 1 0.73583 0.86997 0 47664000 24583000 23081000 4533 962 2339 2585 7441;7442 7441 RAYDIAGSTK 10 1 1 Unmodified _RAYDIAGSTK_ 0 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 541.2859 2 541.285463 1080.55637 NaN NaN NaN -0.3066 -0.00016596 NaN NaN NaN NaN 75.01 0.54157 75.01 74.564 75.105 0 0 0 0 0.014602 1 38250 50.108 19.034 1 NaN NaN 0 8801100 8801100 0 4534 962 2339 2585 7443 7443 RAYDIAGSTK 10 1 1 Unmodified _RAYDIAGSTK_ 0 0 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 550.2971 2 541.285463 1080.55637 82620.66 0.53627 0.00029027 0.030738 1.6638E-05 0.56701 0.00030691 541.285400769019 550.296603646032 20.763 0.31722 20.763 20.596 20.913 0 61 14 6 0 0 0 0.0060613 1 7608 73.655 40.814 1 1.3832 1.0587 0 15849000 6429900 9418600 4535 962 2339 2585 7444 7444 RDELTLEGIK 10 1 1 Unmodified _RDELTLEGIK_ 0 0 0 1 A0A024R8W0;P38919 A0A024R8W0 A0A024R8W0 DDX48;EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 596.3389 2 587.327328 1172.6401 82877.39 0.69137 0.00040606 -0.47322 -0.00027794 0.21814 0.00012812 587.326500406538 596.338275255066 112.02 0.8396 112.02 111.49 112.33 0 181 72 5 0 0 0 0.0021208 2 66314 83.862 59.707 1 2.3178 2.6211 0 20420000 6587700 13833000 4536 158 2340 2586 7445;7446 7445 RDFNQFIK 8 1 1 Unmodified _RDFNQFIK_ 0 0 0 1 B7ZAX9;B4DZC0;O60264;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370 B7ZAX9 B7ZAX9 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 543.2966 2 534.285266 1066.55598 83251.55 0.74392 0.00039746 -0.12704 -6.7876E-05 0.61688 0.00032959 534.285179390724 543.296343951019 108.09 1.1791 108.09 107.66 108.84 7.6294E-06 334 90 6 0 0 0 0.018174 1 63121 74.301 43.689 1 2.3977 2.8631 0 99914000 30348000 69566000 4537 672 2341 2587 7447 7447 RDHALLEEQSK 11 1 1 Unmodified _RDHALLEEQSK_ 0 0 0 1 H7C144;F5GXS2;Q96BG6;A0A0S2Z3G9;O43707 H7C144 H7C144 ACTN4 Alpha-actinin-4 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 448.5733 3 442.565119 1324.67353 NaN NaN NaN -0.15135 -6.6983E-05 NaN NaN NaN NaN 107.78 0.40359 107.78 107.66 108.06 -7.6294E-06 0 0 0 0.0047867 1 63093 55.261 43.115 1 NaN NaN 0 3993000 0 3993000 4538 345 2342 2588 7448 7448 RDIQENDEEAVQVK 14 1 1 Unmodified _RDIQENDEEAVQVK_ 0 0 0 1 J3QRY4;B4DTS5;O00231 J3QRY4 J3QRY4 PSMD11 26S proteasome non-ATPase regulatory subunit 11 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 564.5807 3 558.276074 1671.80639 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.546 1 74.546 74.046 75.046 0 0 0 0 0.01079 1 38187 40.801 30.605 1 4539 662 2343 2589 7449 7449 RDIVEELSALK 11 1 1 Unmodified _RDIVEELSALK_ 0 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 645.873 2 636.861534 1271.70852 76605.34 0.70368 0.00044814 0.3821 0.00024335 1.0858 0.00069149 636.861810268162 645.872844849836 146.81 0.20474 146.81 146.65 146.85 0 67 20 6 0 0 0 0.02729 1 84639 56.404 9.5132 1 1.9296 2.0708 0 3993500 1280300 2713300 4540 994 2344 2590 7450 7450 RDIVLDVSSTSSEDSDEENEELNK 24 1 1 Phospho (STY) _RDIVLDVSSTSSEDS(ph)DEENEELNK_ RDIVLDVS(0.002)S(0.004)T(0.006)S(0.036)S(0.096)EDS(0.856)DEENEELNK RDIVLDVS(-27.13)S(-23.13)T(-21.38)S(-13.72)S(-9.51)EDS(9.51)DEENEELNK 0 0 1 1 Q8N9Q2 Q8N9Q2 Q8N9Q2 SREK1IP1 Protein SREK1IP1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 931.0673 3 930.732744 2789.1764 62854.84 0.96625 0.00089932 0.1726 0.00016065 1.1389 0.00106 931.067331844686 937.074771650628 91.44 0.96742 91.44 91.015 91.982 0 633 93 11 0 0 0 6.443E-08 1 59074 47.331 47.331 6 0.59708 0.45956 0 32694000 19108000 13586000 4541 1155 2345 2591 7451 7451 2227 RDLEWVER 8 0 2 Unmodified _RDLEWVER_ 0 0 0 1 Q6IB29;H7C2Q8;Q99848;B4DRX8;B4DHA6 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 551.786 2 551.78563 1101.55671 NaN NaN NaN -0.27702 -0.00015285 NaN NaN NaN NaN 104.89 0.76141 104.89 104.69 105.46 0 0 0 0 0.011011 1 60781 61.65 25.255 1 NaN NaN 0 6986700 6986700 0 4542 883 2346 2592 7452 7452 RDLGEELEALK 11 1 1 Unmodified _RDLGEELEALK_ 0 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q7Z7R0;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749 A0A024R1N1 A0A024R1N1 MYH9;MYH11 Myosin-9;Myosin-11 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 645.8541 2 636.843342 1271.67213 77664.69 0.8052 0.00051279 -0.090327 -5.7524E-05 0.71488 0.00045526 636.843344786332 645.854376568444 121.24 1.0812 121.24 120.76 121.84 0 178 83 4 0 0 0 0.028572 2 73376 54.608 14.452 1 1.4532 1.6201 0 16118000 6046600 10071000 4543 49 2347 2593 7453;7454 7454 RDLGEELEALK 11 1 1 Unmodified _RDLGEELEALK_ 0 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5;Q7Z7R0;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749 A0A024R1N1 A0A024R1N1 MYH9;MYH11 Myosin-9;Myosin-11 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 645.8547 2 636.843342 1271.67213 NaN NaN NaN 0.037788 2.4065E-05 NaN NaN NaN NaN 120.94 1.1669 120.94 120.12 121.28 0 0 0 0 0.019095 1 72773 44.318 13.754 1 NaN NaN 0 6415000 0 6415000 4544 49 2347 2593 7455 7455 RDLIDNSFNR 10 0 2 Phospho (STY) _RDLIDNS(ph)FNR_ RDLIDNS(1)FNR RDLIDNS(50.21)FNR 0 0 1 1 B4DKU3;Q8IY81 B4DKU3 B4DKU3 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 675.3099 2 665.300991 1328.58743 75017.33 0.91768 0.00061054 -0.091348 -6.0774E-05 0.82634 0.00054976 665.301031174394 675.308998655327 80.562 0.9959 80.562 80.085 81.08 -7.6294E-06 245 91 4 0 0 0 0.005329 1 42988 50.207 33.182 1 0.74051 0.91741 0 34123000 17530000 16592000 4545 632 2348 2594 7456 7456 1040 RDLIDNSFNR 10 0 2 Phospho (STY) _RDLIDNS(ph)FNR_ RDLIDNS(1)FNR RDLIDNS(50.9)FNR 0 0 1 1 B4DKU3;Q8IY81 B4DKU3 B4DKU3 FTSJ3 pre-rRNA processing protein FTSJ3 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 675.3105 2 665.300991 1328.58743 NaN NaN NaN -0.030102 -2.0027E-05 NaN NaN NaN NaN 63.864 1.8567 63.864 62.922 64.778 0 0 0 0 0.027206 1 39734 50.897 32.585 1 NaN NaN 0 18318000 0 18318000 4546 632 2348 2594 7457 7457 1040 RDPALNSGVSQKPDPAK 17 2 1 Phospho (STY) _RDPALNS(ph)GVSQKPDPAK_ RDPALNS(0.999)GVS(0.001)QKPDPAK RDPALNS(29.53)GVS(-29.53)QKPDPAK 0 0 1 2 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 629.3178 3 620.638557 1858.89384 77109.02 0.50854 0.00031562 -0.024338 -1.5105E-05 0.4842 0.00030051 620.638530067664 629.317576503707 66.228 0.51688 66.228 66.028 66.545 0 206 38 7 0 0 0 2.9188E-06 2 32134 71.148 53.09 2 0.63805 0.7518 0 104470000 64122000 40345000 4547 962 2349 2595 7458;7459 7459 1696 RDPALNSGVSQKPDPAK 17 2 1 Phospho (STY) _RDPALNS(ph)GVSQKPDPAK_ RDPALNS(0.999)GVS(0.001)QKPDPAK RDPALNS(32.53)GVS(-32.53)QKPDPAK 0 0 1 2 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 620.6393 3 620.638557 1858.89384 75946.51 0.98361 0.00061047 -0.28444 -0.00017654 0.69917 0.00043393 620.638507506142 629.317245467817 26.254 0.61715 26.254 25.985 26.602 -1.9073E-06 198 29 11 0 0 0 8.8392E-23 1 12306 112.47 88.443 2 1.0378 0.84372 0 124820000 63051000 61768000 4548 962 2349 2595 7460 7460 1696 RDPALNSGVSQKPDPAK 17 2 1 Unmodified _RDPALNSGVSQKPDPAK_ 0 0 0 2 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 593.9835 3 593.983113 1778.92751 77523.65 0.66732 0.00039638 -0.25001 -0.0001485 0.41731 0.00024787 593.983205310884 602.661784372207 78.938 1.9036 78.938 78.294 80.197 0 1166 171 11 0 0 0 1.4014E-37 3 41135 120.08 103 1 0.69091 0.8263 0 1766700000 1039800000 726830000 4549 962 2349 2596 7461;7462;7463 7462 RDPALNSGVSQKPDPAK 17 2 1 Unmodified _RDPALNSGVSQKPDPAK_ 0 0 0 2 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 445.9898 4 445.739154 1778.92751 88560.85 0.12983 5.7872E-05 -0.10961 -4.8857E-05 0.020225 9.0149E-06 445.989852244331 452.248257840616 78.904 1.0673 78.904 78.424 79.492 7.6294E-06 489 94 8 0 0 0 3.536E-05 2 41420 54.004 32.759 1 0.67398 0.79826 0 279130000 163900000 115230000 4550 962 2349 2596 7464;7465 7465 RDPALNSGVSQKPDPAK 17 2 1 Unmodified _RDPALNSGVSQKPDPAK_ 0 0 0 2 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 594.3176 3 593.983113 1778.92751 78210.4 0.54384 0.00032303 -0.18172 -0.00010794 0.36213 0.0002151 593.9831937284 602.661869830789 21.634 0.68511 21.634 21.438 22.123 -1.9073E-06 217 33 10 0 0 0 3.5752E-17 1 8344 90.385 73.986 1 1.216 0.99288 0 94960000 38963000 55997000 4551 962 2349 2596 7466 7466 RDQNYPGAIAIHHPNVAEK 19 1 1 Unmodified _RDQNYPGAIAIHHPNVAEK_ 0 0 0 1 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 533.5273 4 533.276435 2129.07663 NaN NaN NaN -0.09326 -4.9733E-05 NaN NaN NaN NaN 131.88 0.34891 131.88 131.67 132.02 1.5259E-05 0 0 0 0.028672 1 80244 14.623 4.7018 1 NaN NaN 0 6222300 6222300 0 + 4552 756 2350 2597 7467 7467 RDQNYPGAIAIHHPNVAEK 19 1 1 Unmodified _RDQNYPGAIAIHHPNVAEK_ 0 0 0 1 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 533.5277 4 533.276435 2129.07663 NaN NaN NaN -0.14714 -7.8465E-05 NaN NaN NaN NaN 133.19 1.6931 133.19 131.95 133.64 0 0 0 0 0.0003537 1 80717 42.309 32.388 1 NaN NaN 0 14602000 14602000 0 + 4553 756 2350 2597 7468 7468 RDQNYPGAIAIHHPNVAEK 19 1 1 Unmodified _RDQNYPGAIAIHHPNVAEK_ 0 0 0 1 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 533.5276 4 533.276435 2129.07663 NaN NaN NaN 0.057369 3.0594E-05 NaN NaN NaN NaN 145.56 0.78168 145.56 145.27 146.05 0 0 0 0 0.012625 1 83827 24.548 15.018 1 NaN NaN 0 13211000 13211000 0 + 4554 756 2350 2597 7469 7469 RDQNYPGAIAIHHPNVAEK 19 1 1 Unmodified _RDQNYPGAIAIHHPNVAEK_ 0 0 0 1 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 533.5272 4 533.276435 2129.07663 NaN NaN NaN -0.73768 -0.00039339 NaN NaN NaN NaN 72.429 0.20091 72.429 72.372 72.573 0 0 0 0 0.030508 1 45907 13.455 4.0496 1 NaN NaN 0 3021700 3021700 0 + 4555 756 2350 2597 7470 7470 RDSGSFEQYSENIK 14 1 1 Phospho (STY) _RDS(ph)GSFEQYSENIK_ RDS(0.915)GS(0.079)FEQY(0.004)S(0.002)ENIK RDS(10.65)GS(-10.65)FEQY(-23.16)S(-27.69)ENIK 0 0 1 1 B3KWI2;Q8IZT6;B3KM85;Q5VYL4 B3KWI2 B3KWI2 ASPM Abnormal spindle-like microcephaly-associated protein ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 870.3678 2 870.367256 1738.71996 NaN NaN NaN -0.49967 -0.0004349 NaN NaN NaN NaN 78.754 0.9248 78.754 78.149 79.074 0 0 0 0 0.0012097 1 41506 55.66 35.822 4 NaN NaN 0 13428000 13428000 0 4556 606 2351 2598 7471 7471 996 RDSITPDIATK 11 1 1 2 Phospho (STY) _RDS(ph)IT(ph)PDIATK_ RDS(1)IT(1)PDIATK RDS(48.1)IT(44.48)PDIAT(-44.48)K 0 0 2 1 B7Z4V7;Q2TB10;Q49A13;A0A087WXB4 B7Z4V7 B7Z4V7 ZNF800 Zinc finger protein 800 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 688.7972 2 688.796565 1375.57858 75151.38 0.44703 0.00030791 -0.70906 -0.0004884 -0.26203 -0.00018049 688.796586503293 697.806439387424 68.874 0.86042 68.874 68.427 69.287 0 245 84 4 0 0 0 0.0030228 1 33999 54.402 42.555 3 0.83546 0.97465 0 33156000 19327000 13828000 4557 705 2352 2599 7472 7472 1163;2800 RDSITPDIATK 11 1 1 Phospho (STY) _RDS(ph)ITPDIATK_ RDS(0.828)IT(0.172)PDIATK RDS(6.83)IT(-6.83)PDIAT(-95.72)K 0 0 1 1 B7Z4V7;Q2TB10;Q49A13;A0A087WXB4 B7Z4V7 B7Z4V7 ZNF800 Zinc finger protein 800 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 648.8115 2 648.8134 1295.61225 75585.48 0.63721 0.00041343 -0.61191 -0.00039701 0.025308 1.642E-05 648.812490862 657.824655265305 73.4 1.459 73.4 72.576 74.035 7.6294E-06 397 125 5 0 0 0 1.7511E-19 4 37298 141.85 121.18 3 0.9966 1.1848 0 70978000 37144000 33834000 4558 705 2352 2600 7473;7474;7475;7476 7474 1163;2800 RDSITPDIATK 11 1 1 Phospho (STY) _RDS(ph)ITPDIATK_ RDS(0.996)IT(0.004)PDIATK RDS(23.79)IT(-23.79)PDIAT(-95.14)K 0 0 1 1 B7Z4V7;Q2TB10;Q49A13;A0A087WXB4 B7Z4V7 B7Z4V7 ZNF800 Zinc finger protein 800 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 648.814 2 648.8134 1295.61225 75627.5 1.2475 0.00080942 -0.11327 -7.3489E-05 1.1343 0.00073593 648.813284751677 657.824540232412 55.258 2.1557 55.258 53.776 55.931 0 786 188 6 0 0 0 7.1666E-09 2 33163 105.99 93.037 3 1.2903 0.98716 0 23693000 9891000 13802000 4559 705 2352 2600 7477;7478 7477 1163;2800 RDSITPDIATKPGQPLFLDSISPK 24 2 1 2 Phospho (STY) _RDS(ph)ITPDIATKPGQPLFLDS(ph)ISPK_ RDS(0.89)IT(0.108)PDIAT(0.041)KPGQPLFLDS(0.526)IS(0.434)PK RDS(9.5)IT(-9.5)PDIAT(-11.97)KPGQPLFLDS(1.04)IS(-1.04)PK 0 0 2 2 B7Z4V7;Q2TB10;Q49A13 B7Z4V7 B7Z4V7 ZNF800 Zinc finger protein 800 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 928.127 3 919.448436 2755.32348 NaN NaN NaN NaN NaN NaN NaN NaN NaN 125.47 1 125.47 124.97 125.97 0 0 0 0 0.00033558 1 76046 43.566 33.236 10 4560 705 2353 2601 7479 7479 1163;1164;1165;2800 RDTLALLQK 9 1 1 Unmodified _RDTLALLQK_ 0 0 0 1 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 538.3331 2 529.321848 1056.62914 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.41 1 111.41 110.91 111.91 0 0 0 0 0.029737 1 65931 53.968 9.6187 1 4561 1207 2354 2602 7480 7480 RDYGVQLVEEGADTFTAK 18 1 1 Unmodified _RDYGVQLVEEGADTFTAK_ 0 0 0 1 E5RHF4;E5RIZ4;B2R739;Q9P015 E5RHF4 E5RHF4 MRPL15 39S ribosomal protein L15, mitochondrial MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 673.3395 3 666.997088 1997.96943 74892.24 0.65937 0.0004398 0.12188 8.1295E-05 0.78125 0.00052109 667.331875515208 673.004472868485 145.85 0.20445 145.85 145.75 145.95 0 36 11 6 0 0 0 0.00021987 1 84139 40.349 36.315 1 1.5885 1.7013 0 1921200 713950 1207300 4562 535 2355 2603 7481 7481 REATADDLIK 10 1 1 Unmodified _REATADDLIK_ 0 0 0 1 B4DZP5;B4DSA8;Q16531 B4DZP5 B4DZP5 DDB1 DNA damage-binding protein 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 566.3034 2 566.303852 1130.59315 NaN NaN NaN -0.39874 -0.00022581 NaN NaN NaN NaN 92.922 0.34666 92.922 92.658 93.004 0 0 0 0 0.015779 1 51661 48.423 5.3 1 NaN NaN 0 9177200 9177200 0 4563 656 2356 2604 7482 7482 REEEEEDAFEDEKPPK 16 2 1 Unmodified _REEEEEDAFEDEKPPK_ 0 0 0 2 X5DRB1;A8K146;A0A024R2M8;Q01831 X5DRB1 X5DRB1 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 659.9643 3 659.628841 1975.86469 77153.66 1.2649 0.00083438 0.51644 0.00034066 1.7814 0.001175 659.628959961954 668.308149558746 93.427 0.80731 93.427 93.018 93.826 7.6294E-06 177 65 5 0 0 0 2.8802E-05 2 52063 64.56 59.658 1 0.89756 1.0524 0 41370000 15924000 25446000 4564 66 2357 2605 7483;7484 7483 REEEEQQEGGFASPR 15 0 2 Unmodified _REEEEQQEGGFASPR_ 0 0 0 1 A0A087WVR3;A0A087WTW0;Q96T88;B4E0F9;A0A087WWG9 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 590.605 3 583.599328 1747.77615 79594.29 0.63294 0.00036938 0.57686 0.00033665 1.2098 0.00070604 583.599139202245 590.27156219814 72.76 0.93351 72.76 72.165 73.098 0 171 76 5 0 0 0 9.6611E-07 2 36926 65.949 57.974 1 0.69882 0.86427 0 32325000 16204000 16122000 4565 246 2358 2606 7485;7486 7486 REEEEQQEGGFASPR 15 0 2 Unmodified _REEEEQQEGGFASPR_ 0 0 0 1 A0A087WVR3;A0A087WTW0;Q96T88;B4E0F9;A0A087WWG9 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 590.6057 3 583.599328 1747.77615 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.955 1 72.955 72.455 73.455 0 0 0 0 0.00010239 1 37068 58.98 46.059 1 4566 246 2358 2606 7487 7487 REEEEQQEGGFASPR 15 0 2 Phospho (STY) _REEEEQQEGGFAS(ph)PR_ REEEEQQEGGFAS(1)PR REEEEQQEGGFAS(101.62)PR 0 0 1 1 A0A087WVR3;A0A087WTW0;Q96T88;B4E0F9;A0A087WWG9 A0A087WVR3 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 610.2549 3 610.254771 1827.74249 76209.38 0.92675 0.00056555 -0.41899 -0.00025569 0.50776 0.00030986 610.254481273309 616.926759707581 26.203 0.6537 26.203 25.969 26.623 0 222 31 12 0 0 0 9.1782E-13 2 12215 101.62 95.185 1 0.80732 0.70501 0 207810000 119280000 88526000 4567 246 2358 2607 7488;7489 7489 387 REEGPPPPSPDGASSDAEPEPPSGR 25 0 2 Phospho (STY) _REEGPPPPS(ph)PDGASSDAEPEPPSGR_ REEGPPPPS(0.983)PDGAS(0.016)S(0.001)DAEPEPPSGR REEGPPPPS(17.86)PDGAS(-17.86)S(-30.25)DAEPEPPS(-60.13)GR 0 0 1 1 Q9NTJ3;E9PD53;B3KXX5;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JWF0;C9IYK2;C9JJ64;F8WCB7 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 866.0392 3 865.704683 2594.09222 65300.84 0.70852 0.00061337 0.22772 0.00019714 0.93625 0.00081051 866.03921173419 872.377352653057 64.763 0.95527 64.763 64.357 65.313 0 463 70 9 0 0 0 1.3815E-17 4 30763 69.094 69.094 4 0.89111 1.109 0 94813000 53142000 41670000 4568 1220 2359 2608 7490;7491;7492;7493 7493 2469;2470;2471;2472 REGLGLDVER 10 0 2 Unmodified _REGLGLDVER_ 0 0 0 1 A2I829;Q6NUN2;A3F769;A3F768;O15226 A2I829 A2I829 NKRF;NRF NF-kappa-B-repressing factor MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 582.3199 2 572.309469 1142.60439 98089.21 1.3316 0.00076209 0.51853 0.00029676 1.8501 0.0010589 572.309695124856 582.318144636205 101.81 0.5163 101.81 101.66 102.17 0 88 44 4 0 0 0 0.024193 1 58608 60.102 21.08 1 1.5345 1.8017 0 9813100 3590800 6222300 4569 406 2360 2609 7494 7494 REIGDYIR 8 0 2 Unmodified _REIGDYIR_ 0 0 0 1 O60832;U5U7S7;H7C2Q9;H7C0M1;C9IYT0;U5UA77 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 511.274 2 511.274898 1020.53524 NaN NaN NaN -0.051088 -2.612E-05 NaN NaN NaN NaN 97.807 0.25101 97.807 97.596 97.847 0 0 0 0 0.025016 1 55442 43.769 21.278 1 NaN NaN 0 3990600 3990600 0 4570 931 2361 2610 7495 7495 RENPLLPEEEEQR 13 0 2 Unmodified _RENPLLPEEEEQR_ 0 0 0 1 H0Y3P2;D3DQV9;Q59G42;B4DZF2;P78344;H0YEC5;H0YD77;H0YCH5 H0Y3P2 H0Y3P2 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 553.9482 3 546.940914 1637.80091 NaN NaN NaN 0.017695 9.678E-06 NaN NaN NaN NaN 95.612 0.3349 95.612 95.463 95.798 0 0 0 0 0.012991 1 53740 35.303 16.47 1 NaN NaN 0 10139000 0 10139000 4571 673 2362 2611 7496 7496 REPLPSR 7 0 2 Unmodified _REPLPSR_ 0 0 0 1 H0Y6E7;H3BT71;B4E352;P38159;Q2VIN3;Q96E39;B3KRG5;H3BUY5;F1T0J8;Q8IZ40 H0Y6E7 H0Y6E7 RBMX;RBMXL1;RCOR2 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1;REST corepressor 2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 437.7539 2 427.745776 853.477 NaN NaN NaN 0.34603 0.00014801 NaN NaN NaN NaN 68.786 0.63269 68.786 68.462 69.095 0 0 0 0 0.017798 1 34090 54.157 6.3086 1 NaN NaN 0 33098000 0 33098000 4572 684 2363 2612 7497 7497 REQEPTERPLK 11 1 2 Unmodified _REQEPTERPLK_ 0 0 0 2 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 461.5852 3 461.584402 1381.73138 90099.03 0.33311 0.00015376 -0.12388 -5.718E-05 0.20923 9.6576E-05 461.584356081132 470.927848468196 80.964 1.2096 80.964 80.483 81.693 0 372 111 6 0 0 0 0.0069109 1 42750 41.242 29.376 1 0.4143 0.48228 0 83540000 56182000 27358000 4573 1195 2364 2613 7498 7498 REQEVNILK 9 1 1 Unmodified _REQEVNILK_ 0 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 573.8344 2 564.822212 1127.62987 NaN NaN NaN 0.50962 0.00028784 NaN NaN NaN NaN 96.509 0.41119 96.509 96.24 96.651 0 0 0 0 0.013012 1 54283 48.283 8.2815 1 NaN NaN 0 25853000 0 25853000 4574 49 2365 2614 7499 7499 REQEVNILK 9 1 1 Unmodified _REQEVNILK_ 0 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q86XU5 A0A024R1N1 A0A024R1N1 MYH9 Myosin-9 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 573.6331 2 564.822212 1127.62987 81562.81 0.98637 0.00055712 0.092131 5.2038E-05 1.0785 0.00060916 564.822298031798 573.833448383314 97.097 0.60668 97.097 96.842 97.448 7.6294E-06 133 51 4 0 0 0 0.023712 1 54981 58.981 16.382 1 1.7233 2.0382 0 48129000 10641000 37488000 4575 49 2365 2614 7500 7500 RESESESDETPPAAPQLIK 19 1 1 Phospho (STY) _RESESES(ph)DETPPAAPQLIK_ RES(0.055)ES(0.188)ES(0.679)DET(0.078)PPAAPQLIK RES(-10.91)ES(-5.57)ES(5.57)DET(-9.41)PPAAPQLIK 0 0 1 1 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 728.0067 3 721.998367 2162.97327 74210.34 1.1715 0.00084584 0.052745 3.8082E-05 1.2243 0.00088392 721.998763493572 728.005689129336 92.63 0.3178 92.63 92.515 92.833 0 52 27 4 0 0 0 8.9157E-05 1 51428 41.491 36.874 4 1.061 1.1925 0 18854000 8250400 10603000 4576 931 2366 2615 7501 7501 1582;1583;1584;2848 RESESESDETPPAAPQLIK 19 1 1 2 Phospho (STY) _RES(ph)ES(ph)ESDETPPAAPQLIK_ RES(1)ES(0.998)ES(0.002)DETPPAAPQLIK RES(46.45)ES(26.5)ES(-26.5)DET(-41.87)PPAAPQLIK 0 0 2 1 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1122.9786 2 1122.47708 2242.9396 57081 0.78111 0.00087677 -0.31784 -0.00035676 0.46327 0.00052001 1122.47659261719 1131.48819292879 92.877 1.3224 92.877 92.111 93.434 0 740 114 10 0 0 0 5.4182E-47 2 51768 130.89 115.68 6 0.57449 0.69011 0 158280000 98403000 59873000 4577 931 2366 2616 7502;7503 7502 1582;1583;1584;2848 RESESESDETPPAAPQLIK 19 1 1 3 Phospho (STY) _RES(ph)ES(ph)ESDET(ph)PPAAPQLIK_ RES(0.99)ES(0.97)ES(0.485)DET(0.554)PPAAPQLIK RES(17.22)ES(12.41)ES(-0.63)DET(0.63)PPAAPQLIK 0 0 3 1 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1172.4749 2 1162.46024 2322.90593 56333.4 0.23902 0.00027785 -0.32192 -0.00037422 -0.082904 -9.6373E-05 1162.96134637387 1171.47130110193 99.08 1.5413 99.08 98.355 99.896 0 895 128 9 0 0 0 1.083E-08 2 56624 66.779 59.898 4 0.88988 1.0766 0 274220000 159390000 114830000 4578 931 2366 2617 7504;7505 7505 1582;1583;1584;2848 RESEVLDLK 9 1 1 Phospho (STY) _RES(ph)EVLDLK_ RES(1)EVLDLK RES(43.8)EVLDLK 0 0 1 1 O95613 O95613 O95613 PCNT Pericentrin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 593.7944 2 584.784111 1167.55367 80682.63 1.0094 0.00059031 -0.03032 -1.7731E-05 0.97913 0.00057258 584.783802854365 593.795313342174 66.099 0.86166 66.099 65.661 66.523 0 122 77 3 0 0 0 0.0098077 1 41143 43.798 17.012 1 1.6202 1.3892 0 7353300 2641000 4712300 4579 950 2367 2618 7506 7506 1648 RESPSEERLEPK 12 1 2 Phospho (STY) _RES(ph)PSEERLEPK_ RES(0.97)PS(0.03)EERLEPK RES(15.09)PS(-15.09)EERLEPK 0 0 1 2 A0A0A0MSU2;A0PJD3;A0A024R689;A0A1C7CYX1;Q6PJG2 A0A0A0MSU2 A0A0A0MSU2 ELMSAN1;C14orf43 ELM2 and SANT domain-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 512.9075 3 512.906643 1535.6981 83701.17 0.32412 0.00016624 0.014842 7.6124E-06 0.33896 0.00017386 512.906707753755 522.250205361798 67.793 0.45985 67.793 67.622 68.082 0 155 37 7 0 0 0 0.00018993 1 33364 81.526 64.782 2 0.59663 0.69595 0 93921000 60056000 33865000 4580 120 2368 2619 7507 7507 175 RETFVQAVSK 10 1 1 Unmodified _RETFVQAVSK_ 0 0 0 1 B3KRQ2;Q86XI2;F8WE06 B3KRQ2 B3KRQ2 NCAPG2 Condensin-2 complex subunit G2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 582.8237 2 582.822212 1163.62987 NaN NaN NaN 0.17372 0.00010125 NaN NaN NaN NaN 94.022 0.83604 94.022 93.605 94.441 0 0 0 0 0.00014344 1 52446 81.338 34.14 1 NaN NaN 0 16125000 16125000 0 4581 593 2369 2620 7508 7508 RETYTEDFIK 10 1 1 Unmodified _RETYTEDFIK_ 0 0 0 1 P82933 P82933 P82933 MRPS9 28S ribosomal protein S9, mitochondrial ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 651.3239 2 651.322242 1300.62993 NaN NaN NaN 0.48863 0.00031825 NaN NaN NaN NaN 107.85 0.42543 107.85 107.69 108.12 0 0 0 0 0.011766 1 63058 57.859 9.0623 1 NaN NaN 0 4386500 4386500 0 4582 1030 2370 2621 7509 7509 RETYTFENSVNMLPSSTEVSVK 22 1 1 Oxidation (M),Phospho (STY) _RETYTFENSVNM(ox)LPS(ph)STEVSVK_ RETYTFENSVNM(1)LPSSTEVSVK RETYTFENSVNMLPS(0.25)S(0.25)T(0.25)EVS(0.25)VK RETYTFENSVNM(44.71)LPSSTEVSVK RET(-39.81)Y(-41.37)T(-39.81)FENS(-36.64)VNMLPS(0)S(0)T(0)EVS(0)VK 0 1 1 1 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 872.3965 3 872.062931 2613.16696 68093.41 0.7502 0.00065422 -0.23602 -0.00020583 0.51418 0.0004484 872.396953568283 878.404553802868 107.26 0.72215 107.26 106.84 107.56 0 154 60 6 0 0 0 9.2172E-07 1 62304 44.711 23.896 8 0.61769 0.68518 0 14415000 7501500 6913800 4583 1035 2371 2622 7510 7510 298 1920;1921;1922;2915 REVDDLGPEVGDIK 14 1 1 Unmodified _REVDDLGPEVGDIK_ 0 0 0 1 B4E0S6;O43143 B4E0S6 B4E0S6 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 771.8975 2 771.393927 1540.7733 NaN NaN NaN 0.46401 0.00035794 NaN NaN NaN NaN 105.86 0.48462 105.86 105.62 106.11 0 0 0 0 0.018607 1 61607 35.204 9.2653 1 NaN NaN 0 3770300 3770300 0 4584 677 2372 2623 7511 7511 REVLYDSEGLSGEER 15 0 2 2 Phospho (STY) _REVLYDS(ph)EGLS(ph)GEER_ REVLY(0.002)DS(0.998)EGLS(1)GEER REVLY(-27.75)DS(27.75)EGLS(47.85)GEER 0 0 2 1 A0A024QZH6;Q9H7N4 A0A024QZH6 A0A024QZH6 SR-A1;SCAF1 Splicing factor, arginine/serine-rich 19 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 949.8837 2 949.882085 1897.74962 63032.37 0.75202 0.00071433 0.26352 0.00025031 1.0155 0.00096464 949.882562781383 959.890886753792 80.178 1.2209 80.178 79.524 80.745 0 369 113 5 0 0 0 1.9273E-05 1 42305 74.618 62.35 3 0.56859 0.70489 0 37124000 21545000 15579000 4585 15 2373 2624 7512 7512 17;18 RFDDAVVQSDMK 12 1 1 Oxidation (M) _RFDDAVVQSDM(ox)K_ RFDDAVVQSDM(1)K RFDDAVVQSDM(60.26)K 0 1 0 1 Q53HF2;E9PKE3;V9HW22;Q53GZ6;P11142;E9PN89;Q96IS6;E9PN25;E9PPY6;E9PQQ4;E9PQK7;E9PK54;E9PLF4;B4DTX2;E9PNE6;A4D111 Q53HF2 Q53HF2 HSPA8;HEL-S-72p;LOC401308 Heat shock cognate 71 kDa protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 713.8352 2 713.835191 1425.65583 72183.73 0.75729 0.00054058 0.01479 1.0558E-05 0.77208 0.00055113 713.835032334404 722.846532277262 78.516 0.92639 78.516 78.126 79.052 7.6294E-06 354 82 6 0 0 0 0.0021691 1 40930 60.255 49.091 1 1.5001 1.7708 0 45721000 18131000 27590000 4586 810 2374 2625 7513 7513 220 RFGEYNSNMSPEEK 14 1 1 Oxidation (M),Phospho (STY) _RFGEYNSNM(ox)S(ph)PEEK_ RFGEYNSNM(1)SPEEK RFGEY(0.004)NS(0.027)NMS(0.968)PEEK RFGEYNSNM(55.4)SPEEK RFGEY(-23.56)NS(-15.48)NMS(15.48)PEEK 0 1 1 1 E9PFK5;A8KA74;P78316 E9PFK5 E9PFK5 NOP14 Nucleolar protein 14 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 901.3649 2 892.353291 1782.69203 60754.56 0.83424 0.00074443 -0.13198 -0.00011778 0.70225 0.00062666 892.354055437782 901.364487884117 61.444 1.1962 61.444 60.787 61.983 0 567 84 9 0 0 0 0.0039427 1 28379 55.401 36.943 3 0.94926 1.1434 0 195300000 93855000 101450000 4587 507 2375 2626 7514 7514 130 871 RFGEYNSNMSPEEK 14 1 1 Oxidation (M),Phospho (STY) _RFGEYNSNM(ox)S(ph)PEEK_ RFGEYNSNM(1)SPEEK RFGEYNSNMS(1)PEEK RFGEYNSNM(94.97)SPEEK RFGEY(-70.78)NS(-55.23)NMS(55.23)PEEK 0 1 1 1 E9PFK5;A8KA74;P78316 E9PFK5 E9PFK5 NOP14 Nucleolar protein 14 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 595.5729 3 595.237953 1782.69203 77548.08 0.8501 0.00050601 0.089293 5.3151E-05 0.93939 0.00055916 595.238414661547 601.245441786235 27.489 0.76993 27.489 27.293 28.063 0 262 49 11 0 0 0 1.5741E-08 2 13402 94.973 82.827 3 0.88008 0.67883 0 62369000 32416000 29953000 4588 507 2375 2626 7515;7516 7516 130 871 RFPGYDSESK 10 1 1 Unmodified _RFPGYDSESK_ 0 0 0 1 B3KTM6;A2RUM7;Q59GX9;P46777 B3KTM6 B3KTM6 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 593.2809 2 593.280377 1184.5462 78292.59 0.6925 0.00041084 0.073429 4.3564E-05 0.76592 0.00045441 593.280453778075 602.291482579511 79.268 1.8056 79.268 78.372 80.177 0 964 162 9 0 0 0 1.4655E-05 2 41873 108.43 63.68 1 0.98944 1.2069 0 512380000 258660000 253720000 4589 409 2376 2627 7517;7518 7517 RFSPPR 6 0 2 Phospho (STY) _RFS(ph)PPR_ RFS(1)PPR RFS(106.36)PPR 0 0 1 1 H3BPG5;H3BV80;H3BMM9;H3BTC0;D3DU92;A0A024R9P1;Q15287 H3BPG5 H3BPG5 RNPS1;hCG_2026745 RNA-binding protein with serine-rich domain 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 420.1999 2 420.19982 838.385087 91462.11 0.051531 2.1653E-05 0.074938 3.1489E-05 0.12647 5.3142E-05 420.199768480948 430.208146149973 63.227 2.0255 63.227 61.628 63.653 0 561 156 8 0 0 0 0.0035254 3 29572 106.36 29.074 1 0.89271 1.1107 0 87734000 41819000 45915000 4590 170 2377 2628 7519;7520;7521 7521 267 RFSPPRR 7 0 3 Phospho (STY) _RFS(ph)PPRR_ RFS(1)PPRR RFS(40.35)PPRR 0 0 1 2 H3BPG5;H3BV80;H3BMM9;H3BTC0;D3DU92;A0A024R9P1;Q15287 H3BPG5 H3BPG5 RNPS1;hCG_2026745 RNA-binding protein with serine-rich domain 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 332.5025 3 332.502676 994.486198 101837 0.14965 4.9759E-05 -0.27717 -9.2159E-05 -0.12752 -4.2401E-05 332.502568608613 342.510806048048 19.096 0.59521 19.096 18.741 19.336 0 127 26 7 0 0 0 0.019439 1 5952 40.352 24.198 1 0.55738 0.6409 0 65872000 41454000 24419000 4591 170 2378 2629 7522 7522 267 RFSQMLQDK 9 1 1 Oxidation (M) _RFSQM(ox)LQDK_ RFSQM(1)LQDK RFSQM(57.86)LQDK 0 1 0 1 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 584.7928 2 584.792598 1167.57064 NaN NaN NaN 0.11164 6.5284E-05 NaN NaN NaN NaN 73.872 0.37179 73.872 73.716 74.088 0 0 0 0 0.0032442 1 37742 57.859 29.685 1 NaN NaN 0 11849000 11849000 0 4592 1207 2379 2630 7523 7523 337 RFSQMLQDK 9 1 1 Oxidation (M) _RFSQM(ox)LQDK_ RFSQM(1)LQDK RFSQM(66.62)LQDK 0 1 0 1 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 584.7927 2 584.792598 1167.57064 NaN NaN NaN -0.19463 -0.00011382 NaN NaN NaN NaN 74.714 0.78088 74.714 74.336 75.117 0 0 0 0 0.0013094 1 38263 66.621 41.803 1 NaN NaN 0 14299000 14299000 0 4593 1207 2379 2630 7524 7524 337 RFSQMLQDK 9 1 1 Oxidation (M) _RFSQM(ox)LQDK_ RFSQM(1)LQDK RFSQM(67.9)LQDK 0 1 0 1 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 593.8044 2 584.792598 1167.57064 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.429 1 74.429 73.929 74.929 0 0 0 0 0.0013308 1 38118 67.897 10.039 1 4594 1207 2379 2630 7525 7525 337 RFVEVGR 7 0 2 Unmodified _RFVEVGR_ 0 0 0 1 A8K7N0;Q6IPH7;P50914;E7EPB3;A0PJ62;B7Z6S8;A8K3Q9 A8K7N0 A8K7N0 RPL14 60S ribosomal protein L14 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 431.748 2 431.748319 861.482085 NaN NaN NaN -0.51387 -0.00022186 NaN NaN NaN NaN 84.545 0.31599 84.545 84.418 84.734 7.6294E-06 0 0 0 0.025739 1 45472 49.097 12.911 1 NaN NaN 0 4975700 4975700 0 4595 489 2380 2631 7526 7526 RFVGHTK 7 1 1 Unmodified _RFVGHTK_ 0 0 0 1 D6RAU2;E9PD14;D6RFX4;D6RFZ9;H0YAF8;B4DVD2;D6RHH4;D6R9Z1;H0YAM7;J3KPE3;H0Y8W2;D6R9L0;E9KL35;P63244 D6RAU2 D6RAU2 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 431.7544 2 422.743037 843.471521 NaN NaN NaN 0.071266 3.0127E-05 NaN NaN NaN NaN 83.096 1.4236 83.096 82.01 83.434 0 0 0 0 0.010948 2 44700 58.981 14.37 1 NaN NaN 0 62307000 0 62307000 4596 666 2381 2632 7527;7528 7528 RFVGQSGQEDK 11 1 1 Unmodified _RFVGQSGQEDK_ 0 0 0 1 Q8TDD1;H0YHH7 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 625.8113 2 625.809833 1249.60511 NaN NaN NaN 1.7518 0.0010963 NaN NaN NaN NaN 65.328 0.3163 65.328 65.189 65.505 0 0 0 0 0.0037934 1 31399 64.374 27.979 1 NaN NaN 0 16485000 16485000 0 4597 1162 2382 2633 7529 7529 RFVGQSGQEDK 11 1 1 Unmodified _RFVGQSGQEDK_ 0 0 0 1 Q8TDD1;H0YHH7 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 634.8196 2 625.809833 1249.60511 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.353 1 65.353 64.853 65.853 0 0 0 0 0.025093 1 31434 99.752 65.499 1 4598 1162 2382 2633 7530 7530 RFYDLSDSDSNLSGEDSK 18 1 1 4 Phospho (STY) _RFYDLS(ph)DS(ph)DS(ph)NLS(ph)GEDSK_ RFYDLS(1)DS(1)DS(1)NLS(1)GEDSK RFY(-40.9)DLS(40.9)DS(49.24)DS(57.75)NLS(35.29)GEDS(-35.29)K 0 0 4 1 Q9H501;Q8IWH6;Q05C10;Q3SWV1;Q6P6H6 Q9H501 Q9H501 ESF1 ESF1 homolog MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1177.892 2 1177.88064 2353.74673 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.8 1 103.8 103.3 104.3 0 0 0 0 1.601E-20 1 60000 135.21 118.86 15 4599 1206 2383 2634 7531 7531 2403;2404;2405;2406 RGAPAAATAPAPTAHK 16 1 1 Unmodified _RGAPAAATAPAPTAHK_ 0 0 0 1 Q92522 Q92522 Q92522 H1FX Histone H1x MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 502.6151 3 496.60743 1486.80046 85637.48 0.37762 0.00018753 -0.22658 -0.00011252 0.15104 7.5006E-05 496.607325558409 502.614751557459 72.82 1.4148 72.82 71.838 73.253 0 541 121 8 0 0 0 3.5218E-05 2 36950 62.055 57.164 1 0.87133 1.0516 0 227280000 125400000 101880000 4600 1171 2384 2635 7532;7533 7533 RGAPAAATAPAPTAHK 16 1 1 Unmodified _RGAPAAATAPAPTAHK_ 0 0 0 1 Q92522 Q92522 Q92522 H1FX Histone H1x ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 496.6071 3 496.60743 1486.80046 NaN NaN NaN -0.24578 -0.00012205 NaN NaN NaN NaN 72.09 0.73195 72.09 71.508 72.24 0 0 0 0 0.004077 1 36250 38.093 25.112 1 NaN NaN 0 11366000 11366000 0 4601 1171 2384 2635 7534 7534 RGAPAAATAPAPTAHK 16 1 1 Unmodified _RGAPAAATAPAPTAHK_ 0 0 0 1 Q92522 Q92522 Q92522 H1FX Histone H1x MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 496.942 3 496.60743 1486.80046 84618.02 0.48681 0.00024175 0.0056889 2.8251E-06 0.4925 0.00024458 496.60744713877 502.614914300503 17.106 0.21441 17.106 16.996 17.21 -1.9073E-06 30 6 7 0 0 0 7.0401E-05 1 4373 51.265 41.477 1 0.59141 0.46795 0 10663000 6237700 4425500 4602 1171 2384 2635 7535 7535 RGATPPAPPR 10 0 2 Phospho (STY) _RGAT(ph)PPAPPR_ RGAT(1)PPAPPR RGAT(40.72)PPAPPR 0 0 1 1 Q6SPF0 Q6SPF0 Q6SPF0 SAMD1 Atherin ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 373.857 3 367.185124 1098.53354 NaN NaN NaN 0.047826 1.7561E-05 NaN NaN NaN NaN 51.728 0.89361 51.728 51.357 52.25 0 0 0 0 0.012227 1 21051 40.725 18.95 1 NaN NaN 0 6236200 0 6236200 4603 1126 2385 2636 7536 7536 2958 RGATPPAPPR 10 0 2 Phospho (STY) _RGAT(ph)PPAPPR_ RGAT(1)PPAPPR RGAT(49.08)PPAPPR 0 0 1 1 Q6SPF0 Q6SPF0 Q6SPF0 SAMD1 Atherin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 550.2745 2 550.274048 1098.53354 81045.04 0.052114 2.8677E-05 0.85018 0.00046783 0.90229 0.00049651 550.274437711943 560.282768464608 23.238 1.0508 23.238 22.716 23.767 0 310 57 8 0 0 0 0.02132 1 9610 49.081 27.077 1 1.1666 1.0136 0 74809000 34854000 39955000 4604 1126 2385 2636 7537 7537 2958 RGESLDNLDSPR 12 0 2 Phospho (STY) _RGESLDNLDS(ph)PR_ RGES(0.001)LDNLDS(0.999)PR RGES(-29.7)LDNLDS(29.7)PR 0 0 1 1 E9PMS6;B7Z8W3;A0A1P7ZIM8;A0A0A0MTE2;E9PMT2;F8WD26;F8J2B5;J3KP06;Q8WWI1 E9PMS6 E9PMS6 LMO7 LIM domain only protein 7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 729.828 2 719.819745 1437.62494 71163.45 0.58619 0.00042195 -0.21088 -0.00015179 0.37531 0.00027016 719.819979136901 729.827891825101 73.253 1.051 73.253 72.776 73.827 0 308 93 6 0 0 0 0.0040789 2 37058 50.088 34.886 2 1.4191 1.763 0 61748000 27956000 33791000 4605 391 2386 2637 7538;7539 7538 666 RGILTLK 7 1 1 Unmodified _RGILTLK_ 0 0 0 1 B4E335;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B3KUD3;G5E9R0;E7EVS6;C9JTX5;C9JZR7;P0CG38;C9JUM1;L0R5C4;P0CG39;B4E3A4;P63261;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;Q6S8J3;A5A3E0;A1E282;B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;Q13707;B3KW67;A8K3K1;Q7Z7J6;A6NL76;B4DUI8;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1 B4E335;B4E3A4;B7Z6P1 B4E3A4 PS1TP5BP1;ACTB;POTEI;POTEM;POTEJ;ACTG1;POTEE;POTEF;ACTA2;ACTG2;ACTA1;ACTC1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 400.7711 2 400.771263 799.527973 NaN NaN NaN 0.41445 0.0001661 NaN NaN NaN NaN 113.4 0.73232 113.4 113.29 114.03 0 0 0 0 0.0098001 1 67464 60.648 2.4023 1 NaN NaN 0 22720000 22720000 0 4606 683;685;711 2387 2638 7540 7540 RGNDPLTSSPGR 12 0 2 Phospho (STY) _RGNDPLT(ph)SSPGR_ RGNDPLT(0.333)S(0.333)S(0.333)PGR RGNDPLT(0)S(0)S(0)PGR 0 0 1 1 B3KXZ4;B7Z8Z6;P49736;C9J013;C9JZ21;F8WDM3 B3KXZ4 B3KXZ4 MCM2 DNA helicase;DNA replication licensing factor MCM2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 668.8047 2 668.803897 1335.59324 76502.61 0.62642 0.00041896 0.069622 4.6564E-05 0.69605 0.00046552 668.803961135701 678.812027438052 61.854 0.53538 61.854 61.628 62.163 0 66 16 6 0 0 0 0.013383 1 28676 53.569 33.91 3 1.4047 1.7299 0 28304000 11579000 16725000 4607 612 2388 2639 7541 7541 1011;1012;2784 RGPPPPPR 8 0 2 Unmodified _RGPPPPPR_ 0 0 0 1 H0Y6E7;H3BT71;B4E352;P38159 H0Y6E7 H0Y6E7 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 437.2569 2 437.256311 872.49807 91700.93 -0.0031009 -1.3559E-06 0.037859 1.6554E-05 0.034758 1.5198E-05 437.256240781639 447.26450454886 62.057 0.58318 62.057 61.869 62.452 -3.8147E-06 150 41 6 0 0 0 1.1678E-24 1 28795 158.36 97.999 1 1.1754 1.4583 0 44683000 20845000 23839000 4608 684 2389 2640 7542 7542 RGPSEETGGAVFDHPAK 17 1 1 Unmodified _RGPSEETGGAVFDHPAK_ 0 0 0 1 A8K4M5;O60563 A8K4M5 A8K4M5 CCNT1 Cyclin-T1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 591.6293 3 585.620063 1753.83836 NaN NaN NaN -0.13266 -7.7691E-05 NaN NaN NaN NaN 95.703 0.22511 95.703 95.513 95.738 0 0 0 0 0.0015999 1 53697 40.844 28.218 1 NaN NaN 0 5187300 0 5187300 4609 462 2390 2641 7543 7543 RGSLTLTISGESPK 14 1 1 2 Phospho (STY) _RGS(ph)LTLTISGES(ph)PK_ RGS(0.953)LT(0.046)LT(0.003)IS(0.009)GES(0.99)PK RGS(13.33)LT(-13.33)LT(-26.18)IS(-20.84)GES(20.84)PK 0 0 2 1 J3KPS2;Q6ZRV2 J3KPS2 J3KPS2 FAM83H Protein FAM83H MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 803.8701 2 803.367885 1604.72122 67955.7 1.2797 0.0010281 -0.19704 -0.0001583 1.0826 0.00086976 803.367870069862 812.379125424647 93.247 1.1083 93.247 92.728 93.837 0 381 91 7 0 0 0 0.00065359 2 52113 64.298 54.611 10 0.54203 0.64519 0 78249000 45216000 33033000 4610 890 2391 2642 7544;7545 7545 1506;1507;1508 RGSPTTGFIEQK 12 1 1 Phospho (STY) _RGS(ph)PTTGFIEQK_ RGS(0.981)PT(0.007)T(0.011)GFIEQK RGS(19.45)PT(-21.24)T(-19.45)GFIEQK 0 0 1 1 J3KPS2;Q6ZRV2 J3KPS2 J3KPS2 FAM83H Protein FAM83H MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 709.8438 2 700.832124 1399.64969 72833.62 0.80823 0.00056643 -0.24538 -0.00017197 0.56286 0.00039447 700.831880356784 709.843413437412 72.28 0.98773 72.28 71.749 72.737 0 242 81 6 0 0 0 3.7422E-10 3 36565 107.74 75.801 3 0.74518 0.88417 0 61261000 31653000 29608000 4611 890 2392 2643 7546;7547;7548 7547 1513 RGSPTTGFIEQK 12 1 1 Phospho (STY) _RGS(ph)PTTGFIEQK_ RGS(0.963)PT(0.018)T(0.018)GFIEQK RGS(17.2)PT(-17.2)T(-17.2)GFIEQK 0 0 1 1 J3KPS2;Q6ZRV2 J3KPS2 J3KPS2 FAM83H Protein FAM83H ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 700.8324 2 700.832124 1399.64969 NaN NaN NaN -0.38759 -0.00027163 NaN NaN NaN NaN 71.623 0.11269 71.623 71.528 71.641 0 0 0 0 0.0073149 1 36017 55.196 26.572 3 NaN NaN 0 5607900 5607900 0 4612 890 2392 2643 7549 7549 1513 RGSPTTGFIEQK 12 1 1 Phospho (STY) _RGS(ph)PTTGFIEQK_ RGS(0.92)PT(0.04)T(0.04)GFIEQK RGS(13.64)PT(-13.64)T(-13.64)GFIEQK 0 0 1 1 J3KPS2;Q6ZRV2 J3KPS2 J3KPS2 FAM83H Protein FAM83H MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 700.8307 2 700.832124 1399.64969 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.488 1 71.488 70.988 71.988 0 0 0 0 0.0030895 1 35918 50.222 17.807 3 4613 890 2392 2643 7550 7550 1513 RGSPTTGFIEQK 12 1 1 Phospho (STY) _RGS(ph)PTTGFIEQK_ RGS(0.984)PT(0.01)T(0.006)GFIEQK RGS(19.84)PT(-19.84)T(-22.47)GFIEQK 0 0 1 1 J3KPS2;Q6ZRV2 J3KPS2 J3KPS2 FAM83H Protein FAM83H MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 709.8442 2 700.832124 1399.64969 73607.55 0.875 0.00061323 0.17733 0.00012428 1.0523 0.00073751 700.832137225686 709.843647346307 47.049 2.4315 47.049 45.636 48.068 0 568 228 5 0 0 0 2.2397E-06 2 28038 95.854 61.601 3 2.5491 1.9519 0 15475000 4350300 11124000 4614 890 2392 2643 7551;7552 7551 1513 RGSPVPPVPER 11 0 2 Phospho (STY) _RGS(ph)PVPPVPER_ RGS(1)PVPPVPER RGS(80.31)PVPPVPER 0 0 1 1 J3KPS2;Q6ZRV2 J3KPS2 J3KPS2 FAM83H Protein FAM83H MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 635.8194 2 635.818819 1269.62309 78339.22 0.60523 0.00038482 -0.026101 -1.6595E-05 0.57913 0.00036822 635.818942102109 645.826803194599 66.355 0.65601 66.355 66.017 66.673 0 197 47 6 0 0 0 0.00043805 3 32104 80.312 55.297 1 0.72647 0.90111 0 42360000 24558000 17802000 4615 890 2393 2644 7553;7554;7555 7553 1514 RHATAEEVEEEER 13 0 2 Unmodified _RHATAEEVEEEER_ 0 0 0 1 Q8TDN6;Q9NUW4;B4E0B8 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 528.9129 3 528.913136 1583.71758 NaN NaN NaN -0.83742 -0.00044292 NaN NaN NaN NaN 91.679 0.31999 91.679 91.508 91.828 0 0 0 0 0.0053324 1 50749 31.914 24.875 1 NaN NaN 0 8057600 8057600 0 4616 1163 2394 2645 7556 7556 RHATAEEVEEEER 13 0 2 Unmodified _RHATAEEVEEEER_ 0 0 0 1 Q8TDN6;Q9NUW4;B4E0B8 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 528.9135 3 528.913136 1583.71758 NaN NaN NaN -0.087043 -4.6038E-05 NaN NaN NaN NaN 92.353 0.73806 92.353 92.013 92.751 0 0 0 0 0.0047399 1 51346 37.366 22.792 1 NaN NaN 0 10540000 10540000 0 4617 1163 2394 2645 7557 7557 RHATAEEVEEEER 13 0 2 Unmodified _RHATAEEVEEEER_ 0 0 0 1 Q8TDN6;Q9NUW4;B4E0B8 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 535.5854 3 528.913136 1583.71758 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.415 1 92.415 91.915 92.915 0 0 0 0 0.00057719 1 51262 54.402 39.611 1 4618 1163 2394 2645 7558 7558 RHATAEEVEEEER 13 0 2 Unmodified _RHATAEEVEEEER_ 0 0 0 1 Q8TDN6;Q9NUW4;B4E0B8 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 535.5865 3 528.913136 1583.71758 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.527 1 92.527 92.027 93.027 0 0 0 0 6.6752E-05 1 51347 67.115 47.511 1 4619 1163 2394 2645 7559 7559 RHATAEEVEEEER 13 0 2 Unmodified _RHATAEEVEEEER_ 0 0 0 1 Q8TDN6;Q9NUW4;B4E0B8 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 535.5864 3 528.913136 1583.71758 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.569 1 92.569 92.069 93.069 0 0 0 0 0.00055125 1 51378 54.898 34.802 1 4620 1163 2394 2645 7560 7560 RHQELLQK 8 1 1 Unmodified _RHQELLQK_ 0 0 0 1 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 357.2125 3 351.205085 1050.59343 100434.1 0.030699 1.0782E-05 -0.084193 -2.9569E-05 -0.053494 -1.8787E-05 351.204973399748 357.212489974772 112.51 2.4775 112.51 111.72 114.19 -7.6294E-06 425 225 4 0 0 0 0.0046999 5 67052 58.596 38.606 1 1.0367 1.1908 0 25032000 11958000 13074000 4621 1212 2395 2646 7561;7562;7563;7564;7565 7563 RHQELLQK 8 1 1 Unmodified _RHQELLQK_ 0 0 0 1 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 357.2124 3 351.205085 1050.59343 NaN NaN NaN -0.085649 -3.008E-05 NaN NaN NaN NaN 110.64 2.5082 110.64 109.21 111.72 -7.6294E-06 0 0 0 0.005898 2 65928 61.679 35.327 1 NaN NaN 0 19710000 0 19710000 4622 1212 2395 2646 7566;7567 7567 RHQELLQK 8 1 1 Unmodified _RHQELLQK_ 0 0 0 1 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 351.205 3 351.205085 1050.59343 NaN NaN NaN 0.032912 1.1559E-05 NaN NaN NaN NaN 113.16 1.4296 113.16 113.01 114.44 0 0 0 0 0.031053 1 67646 33.396 19.401 1 NaN NaN 0 11640000 11640000 0 4623 1212 2395 2646 7568 7568 RHQELLQK 8 1 1 Unmodified _RHQELLQK_ 0 0 0 1 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 357.2126 3 351.205085 1050.59343 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.11 1 109.11 108.61 109.61 0 0 0 0 0.024768 1 64102 42.599 25.368 1 4624 1212 2395 2646 7569 7569 RHQELLQK 8 1 1 Unmodified _RHQELLQK_ 0 0 0 1 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 351.205 3 351.205085 1050.59343 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.68 1 110.68 110.18 111.18 -7.6294E-06 0 0 0 0.0206 1 65363 44.377 22.14 1 4625 1212 2395 2646 7570 7570 RHVTYVVAK 9 1 1 Unmodified _RHVTYVVAK_ 0 0 0 1 B4DKU3;Q8IY81 B4DKU3 B4DKU3 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 358.2132 3 358.213581 1071.61891 101602.7 -0.06553 -2.3474E-05 0.13005 4.6584E-05 0.064515 2.311E-05 358.213619012041 364.221032537378 120.01 0.93233 120.01 119.33 120.27 0 193 83 4 0 0 0 0.009793 1 72042 40.994 20.294 1 0.93556 1.0285 0 11825000 5977800 5847200 4626 632 2396 2647 7571 7571 RHVTYVVAK 9 1 1 Unmodified _RHVTYVVAK_ 0 0 0 1 B4DKU3;Q8IY81 B4DKU3 B4DKU3 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 358.2135 3 358.213581 1071.61891 101159.7 -0.12983 -4.6507E-05 0.26231 9.3963E-05 0.13248 4.7456E-05 358.213686674943 364.221107106045 121.2 0.37731 121.2 121.02 121.4 -7.6294E-06 76 30 4 0 0 0 0.022497 1 73214 29.743 12.513 1 0.8107 0.88413 0 9174400 4622400 4552000 4627 632 2396 2647 7572 7572 RHVTYVVAK 9 1 1 Unmodified _RHVTYVVAK_ 0 0 0 1 B4DKU3;Q8IY81 B4DKU3 B4DKU3 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 364.2208 3 358.213581 1071.61891 102998.1 -0.13962 -5.0013E-05 1.6424 0.00058834 1.5028 0.00053833 358.213596519485 364.221029099841 121.49 0.77706 121.49 121.27 122.05 7.6294E-06 130 58 6 0 0 0 0.0022625 1 73555 63.184 45.953 1 0.85094 0.93152 0 10443000 4685500 5757800 4628 632 2396 2647 7573 7573 RHVTYVVAK 9 1 1 Unmodified _RHVTYVVAK_ 0 0 0 1 B4DKU3;Q8IY81 B4DKU3 B4DKU3 FTSJ3 pre-rRNA processing protein FTSJ3 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 358.2136 3 358.213581 1071.61891 NaN NaN NaN -0.023837 -8.5387E-06 NaN NaN NaN NaN 120.61 0.3677 120.61 120.48 120.84 7.6294E-06 0 0 0 0.012603 1 72599 43.651 27.644 1 NaN NaN 0 3865300 3865300 0 4629 632 2396 2647 7574 7574 RIAELSEDDQK 11 1 1 Unmodified _RIAELSEDDQK_ 0 0 0 1 Q53GS0;D2CFK9;Q9BZE4;Q8N4P8;B4DHR2 Q53GS0 Q53GS0 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 661.3409 2 652.328056 1302.64156 74447.58 0.96209 0.0006276 -0.10207 -6.658E-05 0.86003 0.00056102 652.327834895104 661.339276249039 76.071 0.72315 76.071 75.729 76.452 0 301 63 7 0 0 0 2.5059E-08 2 39164 112.75 72.747 1 1.2277 1.4657 0 98644000 43435000 55208000 4630 762 2397 2648 7575;7576 7576 RIAELSEDDQK 11 1 1 Unmodified _RIAELSEDDQK_ 0 0 0 1 Q53GS0;D2CFK9;Q9BZE4;Q8N4P8;B4DHR2 Q53GS0 Q53GS0 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 661.3394 2 652.328056 1302.64156 75256.19 0.56525 0.00036873 0.29203 0.0001905 0.85728 0.00055923 652.328213326535 661.339401393276 23.795 0.39792 23.795 23.64 24.038 -1.9073E-06 109 23 7 0 0 0 0.005771 1 10251 74.944 27.121 1 1.6583 1.2708 0 14776000 5163500 9612800 4631 762 2397 2648 7577 7577 RIDISPSTFR 10 0 2 Phospho (STY) _RIDIS(ph)PSTFR_ RIDIS(0.881)PS(0.096)T(0.023)FR RIDIS(9.65)PS(-9.65)T(-15.83)FR 0 0 1 1 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 636.3117 2 636.310827 1270.6071 76059.71 1.5133 0.00096293 -0.043888 -2.7927E-05 1.4694 0.000935 636.310828858613 646.319059207798 101.07 1.9395 101.07 100.41 102.34 0 920 155 9 0 0 0 1.3859E-06 4 58256 114.24 84.472 3 1.0298 1.293 0 804940000 395930000 409010000 4632 1248 2398 2649 7578;7579;7580;7581 7580 2568 RIDISPSTLR 10 0 2 Phospho (STY) _RIDIS(ph)PSTLR_ RIDIS(0.954)PS(0.036)T(0.01)LR RIDIS(14.19)PS(-14.19)T(-19.74)LR 0 0 1 1 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 629.3281 2 619.318652 1236.62275 76458.09 0.95903 0.00059395 1.1165 0.00069149 2.0756 0.0012854 619.318901669365 629.829278041649 95.417 2.6205 95.417 94.221 96.842 -7.6294E-06 921 220 9 0 0 0 0.0036548 2 52839 57.164 33.89 3 1.4536 1.8192 0 366020000 151310000 214710000 4633 809 2399 2650 7582;7583 7582 1396 RIEFAEQINK 10 1 1 Unmodified _RIEFAEQINK_ 0 0 0 1 A8K964;Q9H307;B4DTD4 A8K964 A8K964 PNN Pinin MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 623.6476 2 624.340769 1246.66699 83514.62 1.8743 0.0011702 0.35196 0.00021974 2.2262 0.0013899 624.340799013412 633.352003118445 100.18 0.46381 100.18 99.849 100.31 7.6294E-06 64 36 4 0 0 0 0.02333 1 57375 28.727 6.6408 1 1.4873 1.6203 0 8842700 2807400 6035300 4634 502 2400 2651 7584 7584 RIEPAEELNSNDMK 14 1 1 Oxidation (M) _RIEPAEELNSNDM(ox)K_ RIEPAEELNSNDM(1)K RIEPAEELNSNDM(76.16)K 0 1 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 560.6064 3 554.59816 1660.77265 79730.48 0.69927 0.00038781 -0.53491 -0.00029666 0.16436 9.1153E-05 554.932354264517 560.605504292571 78.199 1.0735 78.199 77.623 78.697 0 409 96 7 0 0 0 3.3973E-05 3 40627 76.156 55.337 1 1.8305 2.188 0 108050000 35639000 72414000 4635 994 2401 2652 7585;7586;7587 7586 286 RIGVPSATEIIK 12 1 1 Phospho (STY) _RIGVPS(ph)ATEIIK_ RIGVPS(0.758)AT(0.242)EIIK RIGVPS(4.96)AT(-4.96)EIIK 0 0 1 1 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 691.383 2 682.370885 1362.72722 74153.85 0.97929 0.00066824 -0.042626 -2.9087E-05 0.93667 0.00063915 682.370720064366 691.382125172553 103.61 1.1313 103.61 103.16 104.29 0 396 109 5 0 0 0 0.0053548 1 66865 43.761 11.137 2 1.4966 1.1418 0 20333000 7298000 13035000 4636 1214 2402 2653 7588 7588 2440 RIIYDSDSESEETLQVK 17 1 1 2 Phospho (STY) _RIIYDS(ph)DS(ph)ESEETLQVK_ RIIY(0.028)DS(0.597)DS(0.597)ES(0.597)EET(0.182)LQVK RIIY(-14.87)DS(0)DS(0)ES(0)EET(-6.44)LQVK 0 0 2 1 P35251;D6RAD2;E0CX09 P35251 P35251 RFC1 Replication factor C subunit 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1086.9639 2 1086.4609 2170.90724 NaN NaN NaN 0.74575 0.00081022 NaN NaN NaN NaN 93.422 0.80415 93.422 93.044 93.848 7.6294E-06 0 0 0 0.0036018 1 52207 45.077 35.794 10 NaN NaN 0 13598000 13598000 0 4637 986 2403 2654 7589 7589 1744;1745;1746;3023 RILELDQFK 9 1 1 Unmodified _RILELDQFK_ 0 0 0 1 B4DE32;B1AHC9;B2RDN9;A0A024R1N4;P12956 B4DE32 B4DE32 XRCC6 X-ray repair cross-complementing protein 6 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 581.3347 2 581.334956 1160.65536 NaN NaN NaN -0.35571 -0.00020679 NaN NaN NaN NaN 121.7 1.0551 121.7 121.48 122.53 0 0 0 0 0.00010321 2 73377 81.548 37.101 1 NaN NaN 0 5575500 5575500 0 4638 50 2404 2655 7590;7591 7590 RILELDQFK 9 1 1 Unmodified _RILELDQFK_ 0 0 0 1 B4DE32;B1AHC9;B2RDN9;A0A024R1N4;P12956 B4DE32 B4DE32 XRCC6 X-ray repair cross-complementing protein 6 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 581.3353 2 581.334956 1160.65536 NaN NaN NaN -0.19112 -0.00011111 NaN NaN NaN NaN 123.4 1.0915 123.4 122.87 123.96 0 0 0 0 0.00012676 1 74483 80.438 30.312 1 NaN NaN 0 6873000 6873000 0 4639 50 2404 2655 7592 7592 RILELDQFK 9 1 1 Unmodified _RILELDQFK_ 0 0 0 1 B4DE32;B1AHC9;B2RDN9;A0A024R1N4;P12956 B4DE32 B4DE32 XRCC6 X-ray repair cross-complementing protein 6 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 581.3353 2 581.334956 1160.65536 NaN NaN NaN NaN NaN NaN NaN NaN NaN 123.85 1 123.85 123.35 124.35 0 0 0 0 0.02537 1 75032 57.96 33.805 1 4640 50 2404 2655 7593 7593 RILEPDDFLDDLDDEDYEEDTPK 23 1 1 Phospho (STY) _RILEPDDFLDDLDDEDYEEDT(ph)PK_ RILEPDDFLDDLDDEDY(0.005)EEDT(0.995)PK RILEPDDFLDDLDDEDY(-22.98)EEDT(22.98)PK 0 0 1 1 A0A024R582;J3KMZ8;Q92785 A0A024R582 A0A024R582 DPF2 Zinc finger protein ubi-d4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 960.0692 3 959.733973 2876.18009 63181.02 0.90321 0.00086684 0.29347 0.00028166 1.1967 0.0011485 960.068174210218 965.742214808703 133.52 0.15761 133.52 133.41 133.57 0 33 6 10 0 0 0 4.4096E-20 1 81319 89.365 86.151 2 0.43954 0.52025 0 50735000 31981000 18753000 4641 105 2405 2656 7594 7594 2636 RILMEHIHK 9 1 1 Oxidation (M) _RILM(ox)EHIHK_ RILM(1)EHIHK RILM(50.47)EHIHK 0 1 0 1 Q8IWR8;J3QR09;J3KTE4;Q53G49;P84098 Q8IWR8 Q8IWR8 RPL19 Ribosomal protein L19;60S ribosomal protein L19 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 398.2257 3 398.225492 1191.65465 94222.54 -0.056676 -2.257E-05 0.10317 4.1083E-05 0.04649 1.8513E-05 398.22546318688 404.233008528383 126.98 2.2202 126.98 126.04 128.26 7.6294E-06 640 199 4 0 0 0 0.0037249 3 76871 50.473 35.855 1 1.3276 1.5173 0 23447000 8855400 14592000 4642 894 2406 2657 7595;7596;7597 7596 247 RILMEHIHK 9 1 1 Oxidation (M) _RILM(ox)EHIHK_ RILM(1)EHIHK RILM(48.09)EHIHK 0 1 0 1 Q8IWR8;J3QR09;J3KTE4;Q53G49;P84098 Q8IWR8 Q8IWR8 RPL19 Ribosomal protein L19;60S ribosomal protein L19 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 398.2249 3 398.225492 1191.65465 NaN NaN NaN 0.048144 1.9172E-05 NaN NaN NaN NaN 122.76 2.3589 122.76 121.06 123.42 0 0 0 0 0.0035077 1 74365 48.091 26.643 1 NaN NaN 0 6793400 6793400 0 4643 894 2406 2657 7598 7598 247 RILPKPTR 8 1 2 Unmodified _RILPKPTR_ 0 0 0 2 B5MCP9;P62081 B5MCP9 B5MCP9 RPS7 40S ribosomal protein S7 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 327.5504 3 327.550304 979.629084 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.17 1 109.17 108.67 109.67 7.6294E-06 0 0 0 0.023974 1 64139 45.382 28.605 1 4644 693 2407 2658 7599 7599 RIPVSPEQAR 10 0 2 Phospho (STY) _RIPVS(ph)PEQAR_ RIPVS(1)PEQAR RIPVS(67.12)PEQAR 0 0 1 1 C9J7L6;Q9H981 C9J7L6 C9J7L6 ACTR8 Actin-related protein 8 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 616.8111 2 616.810994 1231.60744 NaN NaN NaN 0.066785 4.1194E-05 NaN NaN NaN NaN 66.708 0.83331 66.708 66.411 67.245 0 0 0 0 0.0039987 1 32406 67.118 36.568 1 NaN NaN 0 69346000 69346000 0 4645 738 2408 2659 7600 7600 1243 RIPVSPEQAR 10 0 2 Phospho (STY) _RIPVS(ph)PEQAR_ RIPVS(1)PEQAR RIPVS(76.59)PEQAR 0 0 1 1 C9J7L6;Q9H981 C9J7L6 C9J7L6 ACTR8 Actin-related protein 8 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 626.8192 2 616.810994 1231.60744 77378.96 0.99193 0.00061183 -0.10762 -6.6384E-05 0.88431 0.00054545 616.810914586497 626.819134560122 39.606 2.6208 39.606 38.724 41.345 0 1092 235 6 0 0 0 0.00066905 1 22942 76.588 41.893 1 1.6332 1.4155 0 44768000 15762000 29006000 4646 738 2408 2659 7601 7601 1243 RIQDPTEDAEAEDTPRK 17 1 2 Phospho (STY) _RIQDPTEDAEAEDT(ph)PRK_ RIQDPTEDAEAEDT(1)PRK RIQDPT(-61.35)EDAEAEDT(61.35)PRK 0 0 1 2 O96028;Q05CW4;H0Y9L4 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 684.6421 3 684.307424 2049.90044 72646.48 0.47719 0.00032654 0.04448 3.0438E-05 0.52167 0.00035698 684.307799845007 693.65092375105 66.634 0.56615 66.634 66.455 67.021 0 144 38 5 0 0 0 2.8344E-06 2 32425 70.767 70.767 2 0.60365 0.6947 0 43746000 25474000 18272000 4647 953 2409 2660 7602;7603 7602 2865 RIQDPTEDAEAEDTPRK 17 1 2 Phospho (STY) _RIQDPTEDAEAEDT(ph)PRK_ RIQDPTEDAEAEDT(1)PRK RIQDPT(-59.47)EDAEAEDT(59.47)PRK 0 0 1 2 O96028;Q05CW4;H0Y9L4 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 693.6511 3 684.307424 2049.90044 71237.12 1.0198 0.00069782 -0.28421 -0.00019448 0.73554 0.00050334 684.307437128358 693.650976882318 25.782 0.69553 25.782 25.489 26.185 0 291 41 10 0 0 0 5.5428E-06 2 11838 68.634 63.316 2 1.2954 1.1494 0 127350000 59158000 68187000 4648 953 2409 2660 7604;7605 7604 2865 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 446.2448 3 446.245498 1335.71466 88583.59 0.71044 0.00031703 -0.35336 -0.00015768 0.35708 0.00015935 446.245716913787 452.91742996832 99.674 2.8231 99.674 98.203 101.03 0 1458 228 9 0 0 0 0.0047791 1 56301 45.661 45.661 1 0.66888 0.84575 0 4306000000 2592300000 1713600000 4649 528 2410 2661 7606 7606 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 446.2459 3 446.245498 1335.71466 87899.72 0.26857 0.00011985 -0.3766 -0.00016805 -0.10802 -4.8205E-05 446.245573023657 452.917451668966 112.2 1.8774 112.2 111.3 113.17 -7.6294E-06 1238 170 10 0 0 0 5.0996E-05 4 66772 89.805 75.996 1 0.69077 0.87059 0 1961700000 1168500000 793140000 4650 528 2410 2661 7607;7608;7609;7610 7610 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 668.8653 2 668.864608 1335.71466 73190.98 0.87697 0.00058657 -0.1317 -8.8088E-05 0.74527 0.00049848 668.864632367803 678.872781098117 112.28 1.6647 112.28 111.36 113.03 0 1232 149 10 0 0 0 0.0041374 3 66517 91.549 56.645 1 0.67983 0.85717 0 2175500000 1320700000 854850000 4651 528 2410 2661 7611;7612;7613 7611 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 678.8735 2 668.864608 1335.71466 73190.98 0.77436 0.00051794 -0.087933 -5.8815E-05 0.68643 0.00045913 668.86467118835 678.872792786424 113.89 6.3993 113.89 112.81 119.21 7.6294E-06 2947 572 10 0 0 0 6.338E-05 13 67156 104.79 83.925 1 0.66768 0.84138 0 1903600000 1146300000 757310000 4652 528 2410 2661 7614;7615;7616;7617;7618;7619;7620;7621;7622;7623;7624;7625;7626 7614 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 446.2459 3 446.245498 1335.71466 88114.72 0.15566 6.9463E-05 -0.25569 -0.0001141 -0.10003 -4.4639E-05 446.245599397635 452.917500862681 113.55 6.1705 113.55 112.98 119.15 0 2962 551 8 0 0 0 0.00022657 16 67295 83.182 69.373 1 0.6804 0.85745 0 1928600000 1092600000 835950000 4653 528 2410 2661 7627;7628;7629;7630;7631;7632;7633;7634;7635;7636;7637;7638;7639;7640;7641;7642 7628 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 446.2452 3 446.245498 1335.71466 89570.05 0.17527 7.8214E-05 -0.1519 -6.7786E-05 0.02337 1.0429E-05 446.245422743158 452.91750243229 119.47 0.83624 119.47 119.15 119.99 0 155 73 4 0 0 0 0.011726 1 71831 34.264 26.399 1 0.63561 0.77221 0 18612000 10228000 8383500 4654 528 2410 2661 7643 7643 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 446.5791 3 446.245498 1335.71466 95330.97 0.1503 6.7072E-05 0.035188 1.5703E-05 0.18549 8.2774E-05 446.245792984407 452.917556984766 122.78 0.37724 122.78 122.63 123.01 0 63 30 5 0 0 0 0.025417 1 74302 24.5 20.413 1 0.51733 0.594 0 5603300 2056500 3546800 4655 528 2410 2661 7644 7644 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 452.9173 3 446.245498 1335.71466 91814.23 0.26454 0.00011805 0.0238 1.062E-05 0.28834 0.00012867 446.245604326423 452.917581699499 124.06 0.25397 124.06 123.98 124.24 -7.6294E-06 45 21 4 0 0 0 0.020419 1 75167 26.969 23.092 1 0.91275 1.0468 0 5441200 3033500 2407700 4656 528 2410 2661 7645 7645 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 678.8732 2 668.864608 1335.71466 74715.57 0.60449 0.00040432 0.4167 0.00027872 1.0212 0.00068304 668.864803588222 678.873135433048 146.36 0.70303 146.36 146.01 146.71 0 318 59 8 0 0 0 0.02903 1 84406 62.303 43.523 1 0.66404 0.82326 0 37594000 22258000 15336000 4657 528 2410 2661 7646 7646 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 446.2454 3 446.245498 1335.71466 90176.85 -0.008548 -3.8145E-06 0.16966 7.5712E-05 0.16112 7.1898E-05 446.245555835766 452.917787195486 146.36 0.86003 146.36 145.98 146.84 0 321 75 7 0 0 0 0.0029379 2 84428 57.175 47.963 1 0.68629 0.84415 0 27248000 16612000 10635000 4658 528 2410 2661 7647;7648 7647 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 668.8654 2 668.864608 1335.71466 NaN NaN NaN 0.20102 0.00013446 NaN NaN NaN NaN 111.38 0.13689 111.38 111.31 111.44 0 0 0 0 0.00013556 1 65937 84.658 38.5 1 NaN NaN 0 5247400 5247400 0 4659 528 2410 2661 7649 7649 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 452.9171 3 446.245498 1335.71466 NaN NaN NaN -0.29478 -0.00013154 NaN NaN NaN NaN 119.33 0.24763 119.33 119.19 119.44 7.6294E-06 0 0 0 0.024442 1 71740 34.386 27.95 1 NaN NaN 0 8435100 0 8435100 4660 528 2410 2661 7650 7650 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 668.8654 2 668.864608 1335.71466 NaN NaN NaN -0.14277 -9.5496E-05 NaN NaN NaN NaN 119.58 0.89624 119.58 119.43 120.32 0 0 0 0 0.011037 1 72062 51.268 24.153 1 NaN NaN 0 14796000 14796000 0 4661 528 2410 2661 7651 7651 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 668.8653 2 668.864608 1335.71466 NaN NaN NaN 0.0047227 3.1588E-06 NaN NaN NaN NaN 120.74 0.70061 120.74 120.48 121.18 0 0 0 0 0.019095 1 72985 44.318 6.842 1 NaN NaN 0 9520400 9520400 0 4662 528 2410 2661 7652 7652 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 446.5801 3 446.245498 1335.71466 NaN NaN NaN 0.10219 4.5603E-05 NaN NaN NaN NaN 121.06 0.29748 121.06 120.91 121.21 -7.6294E-06 0 0 0 0.005868 1 72991 42.031 29.023 1 NaN NaN 0 6132400 6132400 0 4663 528 2410 2661 7653 7653 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 446.2455 3 446.245498 1335.71466 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111 1 111 110.5 111.5 0 0 0 0 0.030484 1 65618 29.071 21.16 1 4664 528 2410 2661 7654 7654 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 452.9172 3 446.245498 1335.71466 NaN NaN NaN NaN NaN NaN NaN NaN NaN 120.91 1 120.91 120.41 121.41 0 0 0 0 0.0074766 1 72899 48.568 40.055 1 4665 528 2410 2661 7655 7655 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 678.8737 2 668.864608 1335.71466 NaN NaN NaN NaN NaN NaN NaN NaN NaN 122.36 1 122.36 121.86 122.86 -7.6294E-06 0 0 0 0.017204 1 73976 54.608 27.493 1 4666 528 2410 2661 7656 7656 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 452.7722 3 446.245498 1335.71466 93336.09 0.073764 3.2917E-05 0.045246 2.0191E-05 0.11901 5.3107E-05 446.245440467968 452.917490284647 109.66 0.50574 109.66 109.46 109.96 0 75 35 5 0 0 0 0.033774 1 64468 13.589 13.589 1 1.1842 1.4202 0 14678000 6429500 8248400 4667 528 2410 2661 7657 7657 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 446.5795 3 446.245498 1335.71466 89570.06 0.12158 5.4253E-05 -0.10078 -4.497E-05 0.020801 9.2822E-06 446.245529862041 452.917558379575 120.77 0.83971 120.77 120.17 121.01 0 139 70 4 0 0 0 0.016275 1 72385 34.75 28.908 1 0.6011 0.71987 0 14308000 9661800 4646300 4668 528 2410 2661 7658 7658 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 452.918 3 446.245498 1335.71466 88926.52 0.47595 0.00021239 -0.2521 -0.0001125 0.22384 9.9889E-05 446.245347455195 452.917518970386 78.645 0.88786 78.645 78.09 78.978 0 330 83 7 0 0 0 0.0024869 2 50430 62.924 47.384 1 0.77978 0.67521 0 37299000 21470000 15830000 4669 528 2410 2661 7659;7660 7660 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 446.2454 3 446.245498 1335.71466 89294.24 0.43096 0.00019231 -0.17634 -7.8691E-05 0.25462 0.00011362 446.245357554694 452.917572279423 79.594 2.5037 79.594 78.819 81.322 0 523 236 5 0 0 0 0.00049338 5 50504 77.593 66.38 1 0.68138 0.59044 0 43280000 26884000 16396000 4670 528 2410 2661 7661;7662;7663;7664;7665 7661 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 446.2453 3 446.245498 1335.71466 89110.02 0.30788 0.00013739 -0.037957 -1.6938E-05 0.26992 0.00012045 446.245424404703 452.917642611772 81.803 0.90549 81.803 81.322 82.228 0 336 85 6 0 0 0 0.0045441 2 52553 46.88 41.037 1 0.6445 0.55449 0 19610000 12788000 6822000 4671 528 2410 2661 7666;7667 7666 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 678.8731 2 668.864608 1335.71466 NaN NaN NaN -0.13962 -9.3384E-05 NaN NaN NaN NaN 80.175 1.6331 80.175 79.829 81.462 0 0 0 0 0.025757 1 51456 39.918 21.173 1 NaN NaN 0 22824000 0 22824000 4672 528 2410 2661 7668 7668 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 452.9173 3 446.245498 1335.71466 NaN NaN NaN -0.31914 -0.00014241 NaN NaN NaN NaN 80.051 1.3091 80.051 79.661 80.97 0 0 0 0 0.0047867 1 51494 55.261 41.582 1 NaN NaN 0 20286000 0 20286000 4673 528 2410 2661 7669 7669 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 452.9179 3 446.245498 1335.71466 NaN NaN NaN -0.051961 -2.3187E-05 NaN NaN NaN NaN 81.282 0.54451 81.282 80.937 81.482 0 0 0 0 0.0067135 1 52080 48.659 33.12 1 NaN NaN 0 6816800 0 6816800 4674 528 2410 2661 7670 7670 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-SECPEP 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 678.8734 2 668.864608 1335.71466 73449.41 1.1823 0.00079077 -0.18848 -0.00012607 0.99378 0.0006647 668.864423758026 678.872621317128 78.642 0.91048 78.642 78.067 78.978 0 389 85 6 0 0 0 0.014264 1 50103 47.559 19.546 1 0.72805 0.63084 0 42751000 24546000 18205000 4675 528 2410 2661 7671 7671 RISGLIYEETR 11 0 2 Unmodified _RISGLIYEETR_ 0 0 0 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-SECPEP 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 678.8737 2 668.864608 1335.71466 73355.08 1.1503 0.0007694 -0.14961 -0.00010007 1.0007 0.00066933 668.86443402228 678.872710147788 79.461 2.3216 79.461 78.762 81.083 0 556 221 5 0 0 0 0.018834 1 50921 32.008 14.144 1 0.73096 0.63434 0 58407000 35972000 22434000 4676 528 2410 2661 7672 7672 RISGLIYEETR 11 0 2 Phospho (STY) _RIS(ph)GLIYEETR_ RIS(1)GLIYEETR RIS(53.59)GLIY(-53.59)EET(-57.85)R 0 0 1 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 718.8575 2 708.847774 1415.68099 72098.59 1.4753 0.0010458 -0.060037 -4.2557E-05 1.4153 0.0010032 708.84764973021 718.855959525796 101.54 1.7478 101.54 100.89 102.64 0 769 142 7 0 0 0 0.00030541 3 58779 82.55 61.249 3 1.2243 1.5269 0 157360000 68185000 89178000 4677 528 2410 2662 7673;7674;7675 7675 891 RISGLIYEETR 11 0 2 Phospho (STY) _RIS(ph)GLIYEETR_ RIS(1)GLIYEETR RIS(89.69)GLIY(-89.69)EET(-102.49)R 0 0 1 1 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 708.8486 2 708.847774 1415.68099 71889.45 0.91866 0.00065119 0.28254 0.00020028 1.2012 0.00085147 708.847926334569 718.856263645227 92.464 2.0163 92.464 91.651 93.668 0 1202 200 8 0 0 0 3.2308E-14 1 59806 131.4 108.82 3 0.9962 0.86717 0 108620000 51561000 57059000 4678 528 2410 2662 7676 7676 891 RKAEDSDSEPEPEDNVR 17 1 2 2 Phospho (STY) _RKAEDS(ph)DS(ph)EPEPEDNVR_ RKAEDS(1)DS(1)EPEPEDNVR RKAEDS(44.58)DS(44.58)EPEPEDNVR 0 0 2 2 B4E0B9;B4DZC3;B3KMC9;Q9H0D6 B4E0B9 B4E0B9 XRN2 5-3 exoribonuclease 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1067.4136 2 1066.9121 2131.80965 59085.07 0.35089 0.00037437 -0.063046 -6.7265E-05 0.28784 0.0003071 1066.9123342761 1080.92734530164 60.101 0.60034 60.101 59.836 60.436 0 196 40 7 0 0 0 8.118E-05 1 27099 44.577 44.577 1 0.78704 0.9043 0 39956000 22497000 17458000 4679 572 2411 2663 7677 7677 950;951 RKASGPPVSELITK 14 2 1 Phospho (STY) _RKAS(ph)GPPVSELITK_ RKAS(1)GPPVSELITK RKAS(51.97)GPPVS(-51.97)ELIT(-65.79)K 0 0 1 2 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402 Q4VB24 Q4VB24 HIST1H1E;HIST1H1D Histone H1.4;Histone H1.3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 530.294 3 521.614912 1561.82291 83476.3 0.55504 0.00028952 -0.27007 -0.00014087 0.28497 0.00014864 521.614761809529 530.29366715374 112.23 1.9351 112.23 111.56 113.5 -7.6294E-06 1029 177 8 0 0 0 0.00023901 3 66312 70.335 51.012 3 0.65126 0.77184 0 314950000 193490000 121460000 4680 410 2412 2664 7678;7679;7680 7678 702;703 RKASGPPVSELITK 14 2 1 Phospho (STY) _RKAS(ph)GPPVSELITK_ RKAS(1)GPPVSELITK RKAS(35.59)GPPVS(-35.59)ELIT(-42.33)K 0 0 1 2 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402 Q4VB24 Q4VB24 HIST1H1E;HIST1H1D Histone H1.4;Histone H1.3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 521.6148 3 521.614912 1561.82291 82698.14 0.76468 0.00039887 -0.36064 -0.00018811 0.40404 0.00021075 521.614789908408 530.29356689645 73.425 2.1298 73.425 72.026 74.156 7.6294E-06 1149 189 9 0 0 0 0.0013113 1 46754 42.64 32.719 3 0.35643 0.28754 0 204470000 150590000 53871000 4681 410 2412 2664 7681 7681 702;703 RKASGPPVSELITK 14 2 1 Phospho (STY) _RKAS(ph)GPPVSELITK_ RKAS(1)GPPVSELITK RKAS(49.77)GPPVS(-49.77)ELIT(-73.17)K 0 0 1 2 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402 Q4VB24 Q4VB24 HIST1H1E;HIST1H1D Histone H1.4;Histone H1.3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 521.6152 3 521.614912 1561.82291 82893.29 0.82074 0.00042811 -0.33991 -0.0001773 0.48084 0.00025081 521.614831295785 530.29355266144 74.697 2.9276 74.697 73.936 76.864 7.6294E-06 1772 261 10 0 0 0 5.2792E-05 1 47814 74.618 69.548 3 0.34428 0.27579 0 319990000 233940000 86053000 4682 410 2412 2664 7682 7682 702;703 RKEEAEQLR 9 1 2 Unmodified _RKEEAEQLR_ 0 0 0 2 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 386.8785 3 386.879038 1157.61528 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.956 1 84.956 84.456 85.456 0 0 0 0 0.030251 1 45815 41.54 10.99 1 4683 1212 2413 2665 7683 7683 RKEEAEQLR 9 1 2 Unmodified _RKEEAEQLR_ 0 0 0 2 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 396.2222 3 386.879038 1157.61528 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.338 1 85.338 84.838 85.838 0 0 0 0 0.0071931 1 46076 55.649 17.171 1 4684 1212 2413 2665 7684 7684 RKGDEVDGVDEVAK 14 2 1 Unmodified _RKGDEVDGVDEVAK_ 0 0 0 2 B2R5W3;A0A024R3T8;P09874;B4E0E1;Q05D33;Q6PJL0;Q96P95 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 506.2587 3 506.258243 1515.7529 87874.23 0.77421 0.00039195 -0.10056 -5.0908E-05 0.67366 0.00034104 506.258114611238 514.937229382588 95.893 0.73027 95.893 95.628 96.358 0 159 64 4 0 0 0 0.00338 2 53895 34.851 25.072 1 0.64449 0.75374 0 25261000 16835000 8426300 4685 81 2414 2666 7685;7686 7685 RKGDEVDGVDEVAK 14 2 1 Unmodified _RKGDEVDGVDEVAK_ 0 0 0 2 B2R5W3;A0A024R3T8;P09874;B4E0E1;Q05D33;Q6PJL0;Q96P95 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 506.258 3 506.258243 1515.7529 84302.25 1.0622 0.00053772 -0.52003 -0.00026327 0.54213 0.00027446 506.257870370725 514.936966407436 101.46 1.6186 101.46 100.52 102.14 -7.6294E-06 509 131 6 0 0 0 7.8228E-06 2 58510 81.448 67.095 1 0.57712 0.67749 0 51624000 31734000 19890000 4686 81 2414 2666 7687;7688 7688 RKGDEVDGVDEVAK 14 2 1 Unmodified _RKGDEVDGVDEVAK_ 0 0 0 2 B2R5W3;A0A024R3T8;P09874;B4E0E1;Q05D33;Q6PJL0;Q96P95 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 506.2584 3 506.258243 1515.7529 83777.71 1.0087 0.00051064 -0.38714 -0.00019599 0.62151 0.00031465 506.258134593893 515.270617491411 102.71 1.4888 102.71 101.82 103.31 0 393 110 6 0 0 0 0.00029732 1 59038 69.92 63.29 1 0.37883 0.44463 0 49929000 37568000 12362000 4687 81 2414 2666 7689 7689 RKGDEVDGVDEVAK 14 2 1 Unmodified _RKGDEVDGVDEVAK_ 0 0 0 2 B2R5W3;A0A024R3T8;P09874;B4E0E1;Q05D33;Q6PJL0;Q96P95 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 506.2609 3 506.258243 1515.7529 84233.02 0.56727 0.00028718 -0.2712 -0.00013729 0.29607 0.00014989 506.258078935737 514.937098930955 104.51 3.0146 104.51 103.19 106.21 -7.6294E-06 960 214 7 0 0 0 8.3173E-34 5 59590 141.75 120.89 1 0.55751 0.65738 0 120000000 72684000 47321000 4688 81 2414 2666 7690;7691;7692;7693;7694 7690 RKGDEVDGVDEVAK 14 2 1 Unmodified _RKGDEVDGVDEVAK_ 0 0 0 2 B2R5W3;A0A024R3T8;P09874;B4E0E1;Q05D33;Q6PJL0;Q96P95 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 514.9371 3 506.258243 1515.7529 83634.91 0.43267 0.00021904 -0.20066 -0.00010158 0.23201 0.00011746 506.258102542813 514.937144598093 106.89 1.7042 106.89 106.15 107.86 0 508 131 5 0 0 0 6.9454E-05 3 62324 74.966 67.764 1 0.48545 0.56973 0 49227000 30282000 18945000 4689 81 2414 2666 7695;7696;7697 7696 RKGSDDAPYSPTAR 14 1 2 2 Phospho (STY) _RKGS(ph)DDAPYS(ph)PTAR_ RKGS(1)DDAPY(0.062)S(0.747)PT(0.192)AR RKGS(42.09)DDAPY(-10.82)S(5.91)PT(-5.91)AR 0 0 2 2 O75151;Q8N359;B4DH04;E7ET14;A0A087WW48;Q6P2C5 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 561.2319 3 560.89747 1679.67058 79909.59 0.79366 0.00044516 -0.24121 -0.0001353 0.55245 0.00030987 560.897138575614 570.241113540191 60.921 0.39142 60.921 60.761 61.153 0 141 26 8 0 0 0 0.00094839 1 27855 54.15 44.62 6 1.3157 1.5391 0 110160000 50055000 60103000 4690 934 2415 2667 7698 7698 1598;1599 RKGSDDAPYSPTAR 14 1 2 2 Phospho (STY) _RKGS(ph)DDAPYS(ph)PTAR_ RKGS(1)DDAPY(0.111)S(0.574)PT(0.315)AR RKGS(36.91)DDAPY(-7.13)S(2.61)PT(-2.61)AR 0 0 2 2 O75151;Q8N359;B4DH04;E7ET14;A0A087WW48;Q6P2C5 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 840.8423 2 840.842566 1679.67058 64511.16 0.43337 0.0003644 0.57695 0.00048512 1.0103 0.00084952 840.842697394466 854.858347426332 22.488 0.73467 22.488 22.123 22.857 1.9073E-06 184 39 9 0 0 0 4.8204E-05 1 9120 74.776 60.356 6 1.9844 1.764 0 121210000 38614000 82597000 4691 934 2415 2667 7699 7699 1598;1599 RKKKKK 6 5 1 Unmodified _RKKKKK_ 0 0 0 5 Q14684;L8E7L4;K7ELZ8;K7EIY1;K7ENN5;B2R547;A0A024R7I4;H7C0C4;Q96N45;Q86YL3;F8WEP2;H0YG07;A0A0C4DH18;H7C1Z2;F5GX14;E9PCP1;Q6PIN0;Q32LZ0;F8WD49;A5PKU0;Q9NXF0;Q6ZS54;A0A140VJD8;B4DR53;Q9Y421;Q9UKF5;P48751;Q9NVE5;O15040;Q32Q62;Q1ED39;H3BPL4;A0A0A0MTR7;A0A0A0MTC1;Q63HN8;F5GYV5;H7BZV4;B2RE15;A0A0C4DG62;F8WCT1;F5H7X4;Q8TEM4;Q66PJ3;Q9UNS1 Q14684;Q32Q62;Q1ED39;A0A0A0MTR7;F5GYV5;Q9UNS1 Q14684 RRP1B;MFHAS1;FAM32A;USP40;ARL6IP4;MLEC;SLC4A3;DNAJC4;PPIG;ZNF804A;ADAM29;TECPR2;RSL1D1;KNOP1;RNF213;FLJ00169;TIMELESS Ribosomal RNA processing protein 1 homolog B;Anion exchange protein;Protein FAM32A;Disintegrin and metalloproteinase domain-containing protein 29;Anion exchange protein 3;Ubiquitin carboxyl-terminal hydrolase 40;Tectonin beta-propeller repeat-containing protein 2;Lysine-rich nucleolar protein 1;E3 ubiquitin-protein ligase RNF213;ADP-ribosylation factor-like protein 6-interacting protein 4;Protein timeless homolog ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 815.5904 1 815.593767 814.586491 NaN NaN NaN -4.0592 -0.0033107 NaN NaN NaN NaN 12.908 0.24345 12.908 12.842 13.086 0 0 0 0 0.033797 1 1858 0 0 1 NaN NaN 0 204810 204810 0 4692 1060;1084;1082;297;318;1242 2416 2668 7700 7700 RKLDAEDVIGSR 12 1 2 Unmodified _RKLDAEDVIGSR_ 0 0 0 2 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 462.9285 3 453.584402 1357.73138 90125.16 0.0616 2.7941E-05 0.29498 0.0001338 0.35658 0.00016174 453.918924524032 462.92803254956 146.55 0.71584 146.55 146.13 146.84 0 171 63 4 0 0 0 0.0054235 1 84549 41.644 34.1 1 1.5527 1.746 0 5001200 1756200 3245000 4693 994 2417 2669 7701 7701 RKLDAEDVIGSR 12 1 2 Unmodified _RKLDAEDVIGSR_ 0 0 0 2 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 453.5843 3 453.584402 1357.73138 90770.24 0.038255 1.7352E-05 0.13524 6.1345E-05 0.1735 7.8697E-05 453.584478852182 462.928013842291 146.97 1.0548 146.97 146.83 147.89 0 234 93 5 0 0 0 0.0095922 3 84921 34.685 31.462 1 1.4564 1.6455 0 4002300 1750500 2251800 4694 994 2417 2669 7702;7703;7704 7703 RKLDAEDVIGSR 12 1 2 Unmodified _RKLDAEDVIGSR_ 0 0 0 2 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 462.9278 3 453.584402 1357.73138 NaN NaN NaN -0.25897 -0.00011746 NaN NaN NaN NaN 145.52 0.71164 145.52 145.27 145.98 0 0 0 0 0.012777 1 83843 40.066 19.209 1 NaN NaN 0 3275500 0 3275500 4695 994 2417 2669 7705 7705 RKLDAEDVIGSR 12 1 2 Unmodified _RKLDAEDVIGSR_ 0 0 0 2 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 462.9281 3 453.584402 1357.73138 NaN NaN NaN NaN NaN NaN NaN NaN NaN 147.34 1 147.34 146.84 147.84 0 0 0 0 0.0064022 1 84920 47.189 26.332 1 4696 994 2417 2669 7706 7706 RKLEEEEDGK 10 2 1 Unmodified _RKLEEEEDGK_ 0 0 0 2 B9EG90;P11387 B9EG90 B9EG90 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 420.221 3 411.542091 1231.60444 91115.5 0.1371 5.6422E-05 0.1625 6.6875E-05 0.2996 0.0001233 411.542071752187 420.221126492562 77.234 4.0526 77.234 74.784 78.837 0 1421 359 5 0 0 0 2.3196E-22 7 39738 152.7 133.45 1 0.98783 1.1674 0 184340000 86721000 97623000 4697 729 2418 2670 7707;7708;7709;7710;7711;7712;7713 7711 RKLPSDVNEGK 11 2 1 Unmodified _RKLPSDVNEGK_ 0 0 0 2 A0A024R753;Q9NW13;H7C5G8;B4DJ90 A0A024R753 A0A024R753 RBM28 RNA-binding protein 28 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 414.8982 3 414.89821 1241.6728 90030.04 0.051162 2.1227E-05 0.39054 0.00016204 0.4417 0.00018326 414.898199204995 423.577228417138 16.108 0.43707 16.108 15.985 16.422 0 43 15 7 0 0 0 0.0048056 1 3539 45.257 35.935 1 1.1336 0.9913 0 6427200 3001300 3425800 4698 128 2419 2671 7714 7714 RKLSLSEGK 9 2 1 Phospho (STY) _RKLS(ph)LSEGK_ RKLS(0.992)LS(0.008)EGK RKLS(20.67)LS(-20.67)EGK 0 0 1 2 K7EMM8;D3DUE6;D3DUE7;Q49A26;K7EPU6 K7EMM8 K7EMM8 GLYR1;N-PAC Putative oxidoreductase GLYR1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 366.5287 3 366.528668 1096.56417 95930.11 0.029358 1.0761E-05 0.037617 1.3788E-05 0.066975 2.4548E-05 366.528605675555 375.207559569102 19.924 0.30489 19.924 19.763 20.068 0 70 14 8 0 0 0 0.0016798 2 6836 65.234 39.956 2 1.3318 1.1033 0 37922000 16020000 21902000 4699 767 2420 2672 7715;7716 7716 1293;1294 RKLSLSEGK 9 2 1 Phospho (STY) _RKLS(ph)LSEGK_ RKLS(0.888)LS(0.112)EGK RKLS(8.99)LS(-8.99)EGK 0 0 1 2 K7EMM8;D3DUE6;D3DUE7;Q49A26;K7EPU6 K7EMM8 K7EMM8 GLYR1;N-PAC Putative oxidoreductase GLYR1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 549.2901 2 549.289363 1096.56417 81004.63 0.50629 0.0002781 0.35835 0.00019684 0.86463 0.00047493 549.289554738352 562.307836909568 19.913 0.34986 19.913 19.741 20.091 0 79 16 8 0 0 0 2.0287E-05 1 6828 114.93 75.787 2 1.3118 1.0711 0 95200000 39311000 55889000 4700 767 2420 2672 7717 7717 1293;1294 RKLSLSEGK 9 2 1 2 Phospho (STY) _RKLS(ph)LS(ph)EGK_ RKLS(1)LS(1)EGK RKLS(84.3)LS(84.3)EGK 0 0 2 2 K7EMM8;D3DUE6;D3DUE7;Q49A26;K7EPU6 K7EMM8 K7EMM8 GLYR1;N-PAC Putative oxidoreductase GLYR1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 589.2731 2 589.272529 1176.5305 77565.64 0.71185 0.00041948 -0.073623 -4.3384E-05 0.63823 0.00037609 589.272604207283 602.290735338845 24.89 0.78512 24.89 24.683 25.468 0 209 38 9 0 0 0 8.1199E-05 1 11151 84.297 62.242 1 1.386 1.1155 0 237570000 103720000 133850000 4701 767 2420 2673 7718 7718 1293;1294 RKPSTPLSEVIVK 13 2 1 2 Phospho (STY) _RKPST(ph)PLS(ph)EVIVK_ RKPS(0.46)T(0.545)PLS(0.994)EVIVK RKPS(-0.74)T(0.74)PLS(19.88)EVIVK 0 0 2 2 A7E2X7;A0AV47;Q92547 A7E2X7 A7E2X7 TOPBP1 DNA topoisomerase 2-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 807.4084 2 807.406814 1612.79907 68709.3 0.7517 0.00060693 0.40772 0.0003292 1.1594 0.00093612 807.908552723706 820.425706866885 109.5 0.35487 109.5 109.24 109.6 -7.6294E-06 75 26 6 0 0 0 0.0017198 2 64390 58.071 37.487 3 0.84355 0.98556 0 20951000 10728000 10223000 4702 392 2421 2674 7719;7720 7719 671;2710 RKPSTSDDSDSNFEK 15 2 1 Phospho (STY) _RKPS(ph)TSDDSDSNFEK_ RKPS(0.589)T(0.171)S(0.24)DDSDSNFEK RKPS(3.9)T(-5.36)S(-3.9)DDS(-33)DS(-46.87)NFEK 0 0 1 2 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 598.5862 3 598.251027 1791.73125 78062.02 0.60756 0.00036348 0.46762 0.00027975 1.0752 0.00064323 598.586202861026 606.929828939101 65.566 0.65285 65.566 65.339 65.992 0 158 49 6 0 0 0 0.00030178 2 31579 63.488 51.323 5 0.52524 0.61645 0 49455000 34007000 15448000 4703 962 2422 2675 7721;7722 7722 1697;1698 RKPSTSDDSDSNFEK 15 2 1 Phospho (STY) _RKPSTSDDS(ph)DSNFEK_ RKPSTSDDS(0.977)DS(0.023)NFEK RKPS(-54.84)T(-54.84)S(-41.48)DDS(16.23)DS(-16.23)NFEK 0 0 1 2 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 598.252 3 598.251027 1791.73125 78607.48 0.51646 0.00030897 0.15738 9.4155E-05 0.67384 0.00040313 598.251281938789 606.930153291008 68.155 0.46048 68.155 67.966 68.427 0 247 38 10 0 0 0 4.4972E-06 1 33631 80.752 80.752 5 0.78105 0.92456 0 251560000 135030000 116540000 4704 962 2422 2675 7723 7723 1697;1698 RKPSTSDDSDSNFEK 15 2 1 Unmodified _RKPSTSDDSDSNFEK_ 0 0 0 2 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 580.2755 3 571.595584 1711.76492 79488.27 0.67552 0.00038612 -0.12397 -7.086E-05 0.55155 0.00031526 571.595511289431 580.274397178479 80.299 1.7318 80.299 79.242 80.974 -7.6294E-06 1022 160 10 0 0 0 1.9835E-18 3 42789 113.11 92.521 1 0.78425 0.93116 0 446400000 246190000 200210000 4705 962 2422 2676 7724;7725;7726 7726 RKPSTSDDSDSNFEK 15 2 1 Unmodified _RKPSTSDDSDSNFEK_ 0 0 0 2 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 580.2751 3 571.595584 1711.76492 79701.39 0.25849 0.00014775 0.61825 0.00035339 0.87674 0.00050114 571.930102657982 580.274895633965 15.356 0.28845 15.356 15.197 15.485 0 30 6 9 0 0 0 2.3847E-06 1 2993 81.656 61.902 1 1.0719 0.88953 0 33804000 16629000 17175000 4706 962 2422 2676 7727 7727 RKRESESESDETPPAAPQLIK 21 2 2 3 Phospho (STY) _RKRES(ph)ES(ph)ES(ph)DETPPAAPQLIK_ RKRES(0.984)ES(0.986)ES(0.986)DET(0.045)PPAAPQLIK RKRES(17.65)ES(18.26)ES(18.26)DET(-17.65)PPAAPQLIK 0 0 3 3 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 882.058 3 870.041279 2607.10201 65133.25 0.9517 0.00082802 0.7087 0.0006166 1.6604 0.0014446 870.37642385665 882.390797435104 108.4 0.54497 108.4 107.9 108.44 0 180 41 6 0 0 0 1.2351E-07 1 63479 53.278 45.945 4 0.63125 0.63869 0 52032000 27792000 24240000 4707 931 2423 2677 7728 7728 1582;1583;1584;2848 RKSGGNEVSIEER 13 1 2 Phospho (STY) _RKS(ph)GGNEVSIEER_ RKS(0.998)GGNEVS(0.002)IEER RKS(26.29)GGNEVS(-26.29)IEER 0 0 1 2 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 514.2424 3 514.242026 1539.70425 82887.72 0.41214 0.00021194 0.43609 0.00022426 0.84823 0.00043619 514.242281214069 523.585832241293 20.158 0.38174 20.158 20.023 20.405 0 117 19 8 0 0 0 0.0018771 1 7066 45.864 30.228 2 0.60109 0.55042 0 55008000 33683000 21325000 4708 1069 2424 2678 7729 7729 2012 RKTSSDDESEEDEDDLLQR 19 1 2 2 Phospho (STY) _RKT(ph)S(ph)SDDESEEDEDDLLQR_ RKT(0.5)S(0.5)S(0.5)DDES(0.5)EEDEDDLLQR RKT(0)S(0)S(0)DDES(0)EEDEDDLLQR 0 0 2 2 Q9Y5J1;B2RAX6 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 818.9911 3 809.645932 2425.91597 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.827 1 80.827 80.327 81.327 7.6294E-06 0 0 0 0.00013739 1 42883 59.872 45.102 6 4709 1255 2425 2679 7730 7730 2583;2584;2585;3008 RKTSSDDESEEDEDDLLQR 19 1 2 2 Phospho (STY) _RKT(ph)S(ph)SDDESEEDEDDLLQR_ RKT(0.555)S(0.497)S(0.474)DDES(0.474)EEDEDDLLQR RKT(0.74)S(0)S(0)DDES(0)EEDEDDLLQR 0 0 2 2 Q9Y5J1;B2RAX6 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 809.9809 3 809.645932 2425.91597 67629.68 1.1884 0.00096222 -0.26358 -0.0002134 0.92487 0.00074881 809.980008572624 818.989408434205 59.491 2.0121 59.491 58.826 60.838 0 1417 189 10 0 0 0 2.5572E-05 1 36700 48.848 48.848 6 1.1971 1.0684 0 108880000 51730000 57154000 4710 1255 2425 2679 7731 7731 2583;2584;2585;3008 RKVSSAEGAAKEEPK 15 3 1 Phospho (STY) _RKVSS(ph)AEGAAKEEPK_ RKVS(0.418)S(0.582)AEGAAKEEPK RKVS(-1.44)S(1.44)AEGAAKEEPK 0 0 1 3 P05114;F2Z2W6;F2Z2Y5;H7BXJ5 P05114 P05114 HMGN1 Non-histone chromosomal protein HMG-14 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 556.277 3 556.276848 1665.80871 79962.82 0.38318 0.00021315 0.23297 0.00012959 0.61614 0.00034275 556.276957702748 567.627343663049 15.097 0.41538 15.097 14.92 15.336 0 35 9 8 0 0 0 0.00022704 1 2762 62.002 62.002 2 0.19366 0.20705 0 16944000 14025000 2919000 4711 956 2426 2680 7732 7732 1671 RLDDQESPVYAAQQR 15 0 2 Phospho (STY) _RLDDQES(ph)PVYAAQQR_ RLDDQES(1)PVYAAQQR RLDDQES(33.27)PVY(-33.27)AAQQR 0 0 1 1 Q96ST3;H3BMA2;H3BT34;H3BQ76;H3BQ88;H3BNA0;H3BNZ3;H3BQL7;H3BP90 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 625.9545 3 619.282662 1854.82616 NaN NaN NaN -0.40314 -0.00024966 NaN NaN NaN NaN 65.657 0.26969 65.657 65.545 65.815 0 0 0 0 0.00024447 1 31647 54.103 41.003 2 NaN NaN 0 10623000 0 10623000 4712 1187 2427 2681 7733 7733 2338 RLDELEEATK 10 1 1 Unmodified _RLDELEEATK_ 0 0 0 1 A0A024RAC0;Q86V48;E5RHU7;E5RFK8;Q05DE3 A0A024RAC0 A0A024RAC0 LUZP1 Leucine zipper protein 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 611.327 2 602.314417 1202.61428 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.032 1 92.032 91.532 92.532 0 0 0 0 0.012231 1 50988 66.435 19.543 1 4713 180 2428 2682 7734 7734 RLEDAFIVISDSDGEEPK 18 1 1 2 Phospho (STY) _RLEDAFIVIS(ph)DS(ph)DGEEPK_ RLEDAFIVIS(1)DS(1)DGEEPK RLEDAFIVIS(43.99)DS(43.99)DGEEPK 0 0 2 1 D6RC40;D6RCQ3;A0A024R7R0;Q96RL1;D6RDZ5 D6RC40 D6RC40 UIMC1;RAP80 BRCA1-A complex subunit RAP80 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1090.4661 2 1090.46344 2178.91233 NaN NaN NaN 0.015675 1.7093E-05 NaN NaN NaN NaN 121.28 0.83303 121.28 120.78 121.61 -1.5259E-05 0 0 0 0.003355 1 72976 43.991 38.498 1 NaN NaN 0 17523000 17523000 0 4714 139 2429 2683 7735 7735 210;211 RLEISPDSSPER 12 0 2 2 Phospho (STY) _RLEIS(ph)PDS(ph)SPER_ RLEIS(1)PDS(0.652)S(0.348)PER RLEIS(49.73)PDS(2.73)S(-2.73)PER 0 0 2 1 B8QGS9;Q99959 B8QGS9 B8QGS9 PKP2 Plakophilin-2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 783.33 2 773.320935 1544.62732 70528.54 1.1596 0.00089674 -0.38013 -0.00029396 0.77946 0.00060277 773.320307708948 783.329084745907 60.088 1.4577 60.088 59.285 60.743 0 502 138 6 0 0 0 0.0010756 1 37026 68.972 60.667 3 6.0183 5.1986 0 24055000 3168100 20887000 4715 725 2430 2684 7736 7736 1197;1198 RLGGLRPESPESLTSVSR 18 0 3 2 Phospho (STY) _RLGGLRPES(ph)PES(ph)LTSVSR_ RLGGLRPES(0.999)PES(0.928)LT(0.058)S(0.014)VS(0.001)R RLGGLRPES(34.88)PES(12.08)LT(-12.08)S(-18.24)VS(-30.26)R 0 0 2 2 Q6ZW18;Q9H6F5;H0YG79 Q6ZW18;Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 701.3342 3 700.999476 2099.9766 72931.59 1.494 0.0010473 -0.31253 -0.00021908 1.1815 0.00082821 701.333774615957 711.00747975051 102.56 1.5866 102.56 101.77 103.36 0 586 118 8 0 0 0 2.0517E-06 1 59205 58.92 51.932 10 0.55984 0.65026 0 53468000 34897000 18571000 4716 1207;1129 2431 2685 7737 7737 2156;2157 RLGSLVDEFK 10 1 1 Phospho (STY) _RLGS(ph)LVDEFK_ RLGS(1)LVDEFK RLGS(98.1)LVDEFK 0 0 1 1 B4DE32;B1AHC9;B2RDN9;A0A024R1N4;P12956;B4E356;Q6IC76 B4DE32 B4DE32 XRCC6;G22P1 X-ray repair cross-complementing protein 6 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 622.3085 2 622.307753 1242.60095 NaN NaN NaN 0.0042185 2.6252E-06 NaN NaN NaN NaN 115.01 1.1677 115.01 114.18 115.35 0 0 0 0 1.8694E-09 1 68310 98.105 46.759 1 NaN NaN 0 11438000 11438000 0 4717 50 2432 2686 7738 7738 60 RLGSLVDEFK 10 1 1 Phospho (STY) _RLGS(ph)LVDEFK_ RLGS(1)LVDEFK RLGS(57.84)LVDEFK 0 0 1 1 B4DE32;B1AHC9;B2RDN9;A0A024R1N4;P12956;B4E356;Q6IC76 B4DE32 B4DE32 XRCC6;G22P1 X-ray repair cross-complementing protein 6 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 622.3073 2 622.307753 1242.60095 NaN NaN NaN -0.46686 -0.00029053 NaN NaN NaN NaN 115.47 0.3111 115.47 115.35 115.66 0 0 0 0 0.02238 1 68882 57.836 16.553 1 NaN NaN 0 5019900 5019900 0 4718 50 2432 2686 7739 7739 60 RLGSLVDEFK 10 1 1 Phospho (STY) _RLGS(ph)LVDEFK_ RLGS(1)LVDEFK RLGS(44.3)LVDEFK 0 0 1 1 B4DE32;B1AHC9;B2RDN9;A0A024R1N4;P12956;B4E356;Q6IC76 B4DE32 B4DE32 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 631.3189 2 622.307753 1242.60095 NaN NaN NaN NaN NaN NaN NaN NaN NaN 114.31 1 114.31 113.81 114.81 0 0 0 0 0.013046 1 68054 44.299 20.008 1 4719 50 2432 2686 7740 7740 60 RLGTNQENQQPNQQPPGK 18 1 1 Unmodified _RLGTNQENQQPNQQPPGK_ 0 0 0 1 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 679.0099 3 678.675231 2033.00386 74362.91 0.61044 0.00041429 0.053302 3.6175E-05 0.66374 0.00045046 679.009646087616 684.682718386547 59.325 0.60093 59.325 59.088 59.689 0 272 47 7 0 0 0 4.681E-07 1 26630 69.979 45.186 1 0.6876 0.80189 0 32863000 17423000 15439000 4720 943 2433 2687 7741 7741 RLGTNQENQQPNQQPPGK 18 1 1 Unmodified _RLGTNQENQQPNQQPPGK_ 0 0 0 1 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1027.0231 2 1017.50921 2033.00386 60594.28 0.33231 0.00033813 0.45434 0.0004623 0.78666 0.00080043 1017.50899316204 1027.02258385031 17.213 0.21105 17.213 17.087 17.298 0 27 6 6 0 0 0 0.0084228 1 4473 33.782 28.398 1 1.1719 0.93348 0 10156000 4936600 5219300 4721 943 2433 2687 7742 7742 RLGTNQENQQPNQQPPGK 18 1 1 Unmodified _RLGTNQENQQPNQQPPGK_ 0 0 0 1 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 679.0101 3 678.675231 2033.00386 73335.38 0.93236 0.00063277 0.20495 0.00013909 1.1373 0.00077186 679.009624536376 684.68298054334 17.223 0.26354 17.223 17.087 17.351 0 56 8 9 0 0 0 5.6444E-05 1 4500 45.608 35.851 1 1.2472 0.96048 0 33695000 15404000 18291000 4722 943 2433 2687 7743 7743 RLHGLDEEAEQK 12 1 1 Unmodified _RLHGLDEEAEQK_ 0 0 0 1 E5RG31;B4DLA6;B3KMX0;A0A024R7U6;P33991 E5RG31 E5RG31 MCM4 DNA replication licensing factor MCM4 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 481.252 3 475.575795 1423.70556 NaN NaN NaN 0.56739 0.00026984 NaN NaN NaN NaN 103.28 0.24237 103.28 103.14 103.39 0 0 0 0 0.013537 1 59680 37.18 28.875 1 NaN NaN 0 2013700 0 2013700 4723 141 2434 2688 7744 7744 RLHGLDEEAEQK 12 1 1 Unmodified _RLHGLDEEAEQK_ 0 0 0 1 E5RG31;B4DLA6;B3KMX0;A0A024R7U6;P33991 E5RG31 E5RG31 MCM4 DNA replication licensing factor MCM4 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 481.5838 3 475.575795 1423.70556 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.46 1 103.46 102.96 103.96 0 0 0 0 0.0039407 1 59771 49.423 34.221 1 4724 141 2434 2688 7745 7745 RLHGLDEEAEQK 12 1 1 Unmodified _RLHGLDEEAEQK_ 0 0 0 1 E5RG31;B4DLA6;B3KMX0;A0A024R7U6;P33991 E5RG31 E5RG31 MCM4 DNA replication licensing factor MCM4 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 481.5832 3 475.575795 1423.70556 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.72 1 103.72 103.22 104.22 0 0 0 0 0.00011512 1 59945 69.03 57.817 1 4725 141 2434 2688 7746 7746 RLHGLDEEAEQK 12 1 1 Unmodified _RLHGLDEEAEQK_ 0 0 0 1 E5RG31;B4DLA6;B3KMX0;A0A024R7U6;P33991 E5RG31 E5RG31 MCM4 DNA replication licensing factor MCM4 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 481.5839 3 475.575795 1423.70556 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.94 1 103.94 103.44 104.44 -7.6294E-06 0 0 0 0.01911 1 60102 40.725 29.512 1 4726 141 2434 2688 7747 7747 RLIATQPISASDSG 14 0 1 Phospho (STY) _RLIATQPISASDS(ph)G_ RLIATQPIS(0.001)AS(0.058)DS(0.942)G RLIAT(-50.09)QPIS(-30.51)AS(-12.13)DS(12.13)G 0 0 1 1 D9IVD5;A0A024R241;Q16649 D9IVD5 D9IVD5 NFIL3 Nuclear factor interleukin-3-regulated protein MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 748.3618 2 748.361245 1494.70794 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.728 1 84.728 84.228 85.228 0 0 0 0 0.00093728 1 45654 50.088 39.856 4 4727 58 2435 2689 7748 7748 72 RLIPDGCGVK 10 1 1 Unmodified _RLIPDGCGVK_ 0 0 0 1 F8W7C6;A0A087WV22;X1WI28;X5D2T3;P27635;X5D7P1 F8W7C6 F8W7C6 RPL10 60S ribosomal protein L10 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 557.8058 2 557.805508 1113.59646 NaN NaN NaN -0.26468 -0.00014764 NaN NaN NaN NaN 91.831 0.58352 91.831 91.577 92.161 0 0 0 0 0.00017359 1 50780 92.538 57.731 1 NaN NaN 0 13951000 13951000 0 4728 253 2436 2690 7749 7749 RLLGDSDSEEEQK 13 1 1 2 Phospho (STY) _RLLGDS(ph)DS(ph)EEEQK_ RLLGDS(1)DS(1)EEEQK RLLGDS(136.36)DS(136.36)EEEQK 0 0 2 1 B2R6A9;Q9BW71 B2R6A9 B2R6A9 HIRIP3 HIRA-interacting protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 833.3246 2 833.323872 1664.63319 66612.38 0.85377 0.00071147 0.1535 0.00012791 1.0073 0.00083938 833.323886008728 842.335314080096 56.258 1.7844 56.258 55.177 56.961 0 771 146 7 0 0 0 3.8379E-21 4 24155 136.36 115.36 1 0.38468 0.45891 0 92942000 67914000 25028000 4729 532 2437 2691 7750;7751;7752;7753 7751 894;895 RLLGDSDSEEEQK 13 1 1 2 Phospho (STY) _RLLGDS(ph)DS(ph)EEEQK_ RLLGDS(1)DS(1)EEEQK RLLGDS(137.73)DS(137.73)EEEQK 0 0 2 1 B2R6A9;Q9BW71 B2R6A9 B2R6A9 HIRIP3 HIRA-interacting protein 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 833.3248 2 833.323872 1664.63319 66306.45 1.0254 0.00085446 -0.39429 -0.00032857 0.63108 0.00052589 833.323662980564 842.334554535339 43.072 1.2854 43.072 42.617 43.902 0 562 113 8 0 0 0 1.3284E-21 1 25272 137.73 115.73 1 0.33469 0.25831 0 87663000 64392000 23272000 4730 532 2437 2691 7754 7754 894;895 RLQQQQRPEDAEDGAEGGGK 20 1 2 Unmodified _RLQQQQRPEDAEDGAEGGGK_ 0 0 0 2 Q08J23;A0A140T9Y7 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 733.0248 3 723.680822 2168.02064 70834.02 0.65812 0.00047627 0.092876 6.7213E-05 0.75099 0.00054348 723.681045999499 733.024245287717 66.056 0.30307 66.056 65.903 66.206 0 107 23 7 0 0 0 1.4294E-10 1 31981 74.698 74.698 1 1.0984 1.2642 0 44148000 20531000 23618000 4731 1041 2438 2692 7755 7755 RLQQQQRPEDAEDGAEGGGK 20 1 2 Unmodified _RLQQQQRPEDAEDGAEGGGK_ 0 0 0 2 Q08J23;A0A140T9Y7 Q08J23 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 543.265 4 543.012435 2168.02064 84036.85 0.38014 0.00020642 -0.19044 -0.00010341 0.1897 0.00010301 543.012326673174 550.020093369446 66.049 0.29051 66.049 65.903 66.193 0 101 22 7 0 0 0 7.6173E-11 1 31985 76.301 76.301 1 0.88724 1.0174 0 35597000 16936000 18661000 4732 1041 2438 2692 7756 7756 RLQSSLQSQR 10 0 2 Phospho (STY) _RLQS(ph)SLQSQR_ RLQS(0.945)S(0.053)LQS(0.001)QR RLQS(12.49)S(-12.49)LQS(-29.02)QR 0 0 1 1 Q86X06;A0A024R4V5;Q9Y4Q3;B7Z926;A0A024R4W4;O95696;B4DZ41;B4E3L9;Q59G93;J3KQ61 Q86X06 Q86X06 BRD1;DKFZp434B094 Bromodomain-containing protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 651.8264 2 641.816808 1281.61906 77391.55 1.0089 0.00064751 0.17418 0.00011179 1.1831 0.0007593 641.816713718329 651.82532986666 27.607 0.27482 27.607 27.43 27.704 0 54 15 6 0 0 0 0.0091358 1 13578 42.031 27.469 3 1.5392 1.3317 0 11800000 4519500 7280700 4733 94 2439 2693 7757 7757 125 RLSLDIQSPPNIGLR 15 0 2 2 Phospho (STY) _RLS(ph)LDIQS(ph)PPNIGLR_ RLS(1)LDIQS(1)PPNIGLR RLS(169.43)LDIQS(169.43)PPNIGLR 0 0 2 1 Q9NSI6;Q5R2U8;H0Y5I9;Q5R2U6;H0Y463;H7BZR9 Q9NSI6 Q9NSI6 BRWD1;WDR9 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 929.9584 2 919.949908 1837.88526 62717.91 0.49106 0.00045175 0.25286 0.00023261 0.74391 0.00068436 919.950228623183 929.958253413458 122.15 1.2654 122.15 121.63 122.89 -7.6294E-06 678 93 10 0 0 0 4.8144E-63 3 73629 169.43 143.39 1 0.61247 0.76498 0 224360000 138390000 85974000 4734 1218 2440 2694 7758;7759;7760 7758 2460;2461 RLSLDIQSPPNIGLR 15 0 2 2 Phospho (STY) _RLS(ph)LDIQS(ph)PPNIGLR_ RLS(1)LDIQS(1)PPNIGLR RLS(53.62)LDIQS(53.62)PPNIGLR 0 0 2 1 Q9NSI6;Q5R2U8;H0Y5I9;Q5R2U6;H0Y463;H7BZR9 Q9NSI6 Q9NSI6 BRWD1;WDR9 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 620.309 3 613.635698 1837.88526 76107.2 0.54728 0.00033583 -0.57893 -0.00035525 -0.031648 -1.942E-05 613.970034485636 620.307194979807 122.15 0.94906 122.15 121.67 122.62 0 204 69 6 0 0 0 0.00046814 1 73964 53.625 47.054 1 0.734 0.88278 0 15469000 8925300 6543700 4735 1218 2440 2694 7761 7761 2460;2461 RLSLSPKK 8 2 1 2 Phospho (STY) _RLS(ph)LS(ph)PKK_ RLS(1)LS(1)PKK RLS(59.16)LS(59.16)PKK 0 0 2 2 B5BUA4;Q5FBB7;A0A024R2J4 B5BUA4 B5BUA4 SGOL1 Shugoshin-like 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 544.7673 2 544.766882 1087.51921 80666.63 0.54531 0.00029707 0.032743 1.7837E-05 0.57805 0.0003149 544.76692835833 557.785098789717 64.812 0.65302 64.812 64.484 65.137 0 220 47 7 0 0 0 0.0038187 1 30852 59.155 12.777 1 0.77974 0.92374 0 291960000 171870000 120100000 4736 691 2441 2695 7762 7762 1139;1140 RLSPPSSSAASSYSFSDLNSTR 22 0 2 Phospho (STY) _RLS(ph)PPSSSAASSYSFSDLNSTR_ RLS(0.475)PPS(0.475)S(0.036)S(0.014)AASSYSFSDLNSTR RLS(0)PPS(0)S(-11.17)S(-15.45)AAS(-45.08)S(-46.37)Y(-58.15)S(-65.92)FS(-77.24)DLNS(-88.01)T(-89.09)R 0 0 1 1 P50402 P50402 P50402 EMD Emerin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 800.03 3 799.695459 2396.06455 65811.55 0.92211 0.00073741 -0.79898 -0.00063894 0.12313 9.8465E-05 800.029151781082 806.701252163052 99.141 1.3736 99.141 98.547 99.921 0 857 114 12 0 0 0 1.4805E-24 2 56724 92.551 88.502 11 0.45429 0.5676 0 242170000 160830000 81337000 4737 1002 2442 2696 7763;7764 7764 1821;1822;1823;1824;1825 RLSPPSSSAASSYSFSDLNSTR 22 0 2 Phospho (STY) _RLSPPSS(ph)SAASSYSFSDLNSTR_ RLS(0.226)PPS(0.226)S(0.272)S(0.272)AAS(0.002)S(0.001)Y(0.001)SFSDLNSTR RLS(-0.81)PPS(-0.81)S(0)S(0)AAS(-20.73)S(-23.24)Y(-23.09)S(-29.41)FS(-38.29)DLNS(-41.44)T(-41.43)R 0 0 1 1 P50402 P50402 P50402 EMD Emerin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 800.0302 3 799.695459 2396.06455 67090.96 1.2214 0.00097673 0.010293 8.2313E-06 1.2317 0.00098496 800.029692264239 806.701966716393 99.132 1.46 99.132 98.448 99.908 0 1029 138 9 0 0 0 1.0444E-05 1 63548 41.491 33.687 11 0.56521 0.49128 0 80690000 52968000 27722000 4738 1002 2442 2696 7765 7765 1821;1822;1823;1824;1825 RLSPPSSSAASSYSFSDLNSTR 22 0 2 2 Phospho (STY) _RLS(ph)PPSSSAASSYS(ph)FSDLNSTR_ RLS(0.793)PPS(0.142)S(0.028)S(0.036)AAS(0.049)S(0.044)Y(0.026)S(0.805)FS(0.074)DLNS(0.001)T(0.001)R RLS(7.92)PPS(-7.92)S(-15)S(-13.86)AAS(-12.68)S(-13.24)Y(-15.36)S(10.76)FS(-10.76)DLNS(-30.52)T(-30.08)R 0 0 2 1 P50402 P50402 P50402 EMD Emerin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 826.6885 3 826.350902 2476.03088 68021.11 1.8939 0.001565 -0.3269 -0.00027013 1.567 0.0012949 826.685335808372 833.357297254426 100.12 0.63592 100.12 99.823 100.46 0 117 49 6 0 0 0 4.464E-15 1 57202 74.973 74.973 55 0.32314 0.39642 0 25071000 16871000 8199800 4739 1002 2442 2697 7766 7766 1821;1822;1823;1824;1825 RLSPSASPPR 10 0 2 2 Phospho (STY) _RLS(ph)PSAS(ph)PPR_ RLS(1)PS(0.001)AS(0.999)PPR RLS(33.33)PS(-33)AS(33)PPR 0 0 2 1 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3;E9PCT1;M0R088 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 614.2681 2 614.267778 1226.521 77553.15 0.58836 0.00036141 0.034682 2.1304E-05 0.62304 0.00038272 614.267863510595 624.275976196061 49.206 1.7801 49.206 48.49 50.27 -3.8147E-06 839 142 8 0 0 0 7.4306E-11 2 19650 132.59 113.63 3 0.60166 0.74978 0 130120000 80939000 49176000 4740 353 2443 2698 7767;7768 7767 552;553;554 RLSPSASPPR 10 0 2 2 Phospho (STY) _RLS(ph)PS(ph)ASPPR_ RLS(0.997)PS(0.643)AS(0.36)PPR RLS(23.93)PS(2.53)AS(-2.53)PPR 0 0 2 1 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3;E9PCT1;M0R088 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 624.2766 2 614.267778 1226.521 76075.81 0.79948 0.00049109 0.16284 0.00010003 0.96231 0.00059112 614.267916664609 624.276177119944 36.416 2.6749 36.416 35.295 37.97 0 1001 226 9 0 0 0 0.0025594 1 20841 56.087 40.547 3 0.27347 0.23888 0 220080000 171910000 48175000 4741 353 2443 2698 7769 7769 552;553;554 RLSSLRASTSK 11 1 2 3 Phospho (STY) _RLS(ph)S(ph)LRAS(ph)TSK_ RLS(1)S(1)LRAS(0.76)T(0.21)S(0.03)K RLS(58.07)S(50.02)LRAS(5.6)T(-5.6)S(-14.02)K 0 0 3 2 Q96DV6;A2A3R6;P62753;A2A3R5 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 737.3173 2 723.301164 1444.58777 71099.13 0.96201 0.00069582 0.23433 0.00016949 1.1963 0.00086532 723.301336023323 737.316574511025 56.368 1.791 56.368 55.494 57.285 0 848 150 8 0 0 0 1.2205E-05 2 24178 91.07 91.07 10 1.0603 1.2646 0 330810000 157170000 173640000 4742 405 2444 2699 7770;7771 7770 693;694;695 RLSYNTASNK 10 1 1 Unmodified _RLSYNTASNK_ 0 0 0 1 A0A024RDH8;P49207 A0A024RDH8 A0A024RDH8 RPL34 60S ribosomal protein L34 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 586.3132 2 577.301644 1152.58874 81458.18 0.50792 0.00029322 0.17913 0.00010341 0.68704 0.00039663 577.301704897826 586.312989035748 67.041 0.49705 67.041 66.856 67.353 0 173 41 6 0 0 0 9.5374E-06 1 32812 103.91 58.828 1 0.90413 1.0753 0 73450000 38953000 34497000 4743 228 2445 2700 7772 7772 RLTLDHEK 8 1 1 Unmodified _RLTLDHEK_ 0 0 0 1 O00566;B3KPV5 O00566 O00566 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 343.8649 3 337.857574 1010.55089 104511.1 -0.087733 -2.9641E-05 -0.01745 -5.8957E-06 -0.10518 -3.5537E-05 337.857521720831 343.865007025113 99.127 2.2082 99.127 97.892 100.1 0 377 183 4 0 0 0 0.005559 3 56229 55.112 42.284 1 0.95432 1.1283 0 47693000 22202000 25490000 4744 917 2446 2701 7773;7774;7775 7774 RLTLDHEK 8 1 1 Unmodified _RLTLDHEK_ 0 0 0 1 O00566;B3KPV5 O00566 O00566 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 343.8653 3 337.857574 1010.55089 104511.2 0.85078 0.00028744 0.75196 0.00025406 1.6027 0.0005415 337.857703410462 343.86532731174 100.43 0.44462 100.43 100.21 100.66 0 76 33 4 0 0 0 0.026318 1 57456 30.797 25.016 1 1.0318 1.1752 0 22416000 10121000 12295000 4745 917 2446 2701 7776 7776 RLTLDHEK 8 1 1 Unmodified _RLTLDHEK_ 0 0 0 1 O00566;B3KPV5 O00566 O00566 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 337.8575 3 337.857574 1010.55089 104511.2 0.59752 0.00020188 0.60408 0.00020409 1.2016 0.00040597 337.857687774192 343.865199346648 100.81 0.51631 100.81 100.51 101.03 0 105 37 4 0 0 0 0.012959 1 57959 41.427 30.603 1 1.157 1.3362 0 26842000 13308000 13534000 4746 917 2446 2701 7777 7777 RLTLDHEK 8 1 1 Unmodified _RLTLDHEK_ 0 0 0 1 O00566;B3KPV5 O00566 O00566 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 343.8652 3 337.857574 1010.55089 104511.1 0.43979 0.00014859 -0.02069 -6.9903E-06 0.4191 0.00014159 337.857524810117 343.864983291665 101.28 0.79469 101.28 101 101.8 0 191 66 4 0 0 0 0.0090777 1 58105 45.368 36.154 1 0.98627 1.1453 0 29243000 15342000 13901000 4747 917 2446 2701 7778 7778 RLTLDHEK 8 1 1 Unmodified _RLTLDHEK_ 0 0 0 1 O00566;B3KPV5 O00566 O00566 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 343.865 3 337.857574 1010.55089 NaN NaN NaN 0.010829 3.6585E-06 NaN NaN NaN NaN 99.671 0.87074 99.671 99.464 100.33 -7.6294E-06 0 0 0 0.013755 1 56830 43.442 32.732 1 NaN NaN 0 20807000 0 20807000 4748 917 2446 2701 7779 7779 RLTLDHEK 8 1 1 Unmodified _RLTLDHEK_ 0 0 0 1 O00566;B3KPV5 O00566 O00566 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 343.8653 3 337.857574 1010.55089 NaN NaN NaN 0.52254 0.00017654 NaN NaN NaN NaN 102.06 0.95665 102.06 101.77 102.73 0 0 0 0 0.0035121 1 58662 70.256 57.208 1 NaN NaN 0 9670300 0 9670300 4749 917 2446 2701 7780 7780 RMATEVAADALGEEWK 16 1 1 Oxidation (M) _RM(ox)ATEVAADALGEEWK_ RM(1)ATEVAADALGEEWK RM(69.19)ATEVAADALGEEWK 0 1 0 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 604.2971 3 598.289326 1791.84615 78398.48 0.88229 0.00052786 -0.29737 -0.00017792 0.58491 0.00034995 598.623493530036 604.29676531737 117.14 1.5243 117.14 116.04 117.56 7.6294E-06 509 136 6 0 0 0 9.442E-06 1 69860 69.188 64.558 1 0.82171 0.93283 0 21479000 10589000 10890000 4750 405 2447 2702 7781 7781 103 RMATEVAADALGEEWK 16 1 1 Oxidation (M) _RM(ox)ATEVAADALGEEWK_ RM(1)ATEVAADALGEEWK RM(69.98)ATEVAADALGEEWK 0 1 0 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 598.2892 3 598.289326 1791.84615 NaN NaN NaN -2.132 -0.0012756 NaN NaN NaN NaN 117.68 2.6357 117.68 116.17 118.8 0 0 0 0 5.7182E-07 3 69763 69.979 57.265 1 NaN NaN 0 28359000 28359000 0 4751 405 2447 2702 7782;7783;7784 7782 103 RMATEVAADALGEEWK 16 1 1 Oxidation (M) _RM(ox)ATEVAADALGEEWK_ RM(1)ATEVAADALGEEWK RM(43.45)ATEVAADALGEEWK 0 1 0 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 598.2895 3 598.289326 1791.84615 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.89 1 115.89 115.39 116.39 0 0 0 0 0.0007482 1 69200 43.454 31.539 1 4752 405 2447 2702 7785 7785 103 RMATEVAADALGEEWK 16 1 1 Oxidation (M) _RM(ox)ATEVAADALGEEWK_ RM(1)ATEVAADALGEEWK RM(50.18)ATEVAADALGEEWK 0 1 0 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 604.2997 3 598.289326 1791.84615 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.01 1 116.01 115.51 116.51 -7.6294E-06 0 0 0 0.00023737 1 69284 50.178 32.672 1 4753 405 2447 2702 7786 7786 103 RMATEVAADALGEEWK 16 1 1 Oxidation (M) _RM(ox)ATEVAADALGEEWK_ RM(1)ATEVAADALGEEWK RM(71.56)ATEVAADALGEEWK 0 1 0 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 604.2964 3 598.289326 1791.84615 NaN NaN NaN NaN NaN NaN NaN NaN NaN 117.55 1 117.55 117.05 118.05 7.6294E-06 0 0 0 2.1022E-07 1 70423 71.558 55.966 1 4754 405 2447 2702 7787 7787 103 RMATEVAADALGEEWK 16 1 1 Oxidation (M) _RM(ox)ATEVAADALGEEWK_ RM(1)ATEVAADALGEEWK RM(51.8)ATEVAADALGEEWK 0 1 0 1 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 Q96DV6 RPS6 40S ribosomal protein S6 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 604.2979 3 598.289326 1791.84615 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.32 1 118.32 117.82 118.82 0 0 0 0 0.00017782 1 70986 51.798 39.415 1 4755 405 2447 2702 7788 7788 103 RMEELHNQEVQK 12 1 1 Oxidation (M) _RM(ox)EELHNQEVQK_ RM(1)EELHNQEVQK RM(98.59)EELHNQEVQK 0 1 0 1 H7C367;C9JYS8;A8K525;A0A0S2Z4Z9;Q15233 H7C367 H7C367 NONO Non-POU domain-containing octamer-binding protein ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 525.5956 3 519.587706 1555.74129 NaN NaN NaN -0.26099 -0.00013561 NaN NaN NaN NaN 72.929 3.0911 72.929 70.362 73.453 0 0 0 0 1.6073E-10 6 35809 98.592 72.481 1 NaN NaN 0 84972000 0 84972000 4756 356 2448 2703 7789;7790;7791;7792;7793;7794 7791 85 RMEELHNQEVQK 12 1 1 Oxidation (M) _RM(ox)EELHNQEVQK_ RM(1)EELHNQEVQK RM(46.7)EELHNQEVQK 0 1 0 1 H7C367;C9JYS8;A8K525;A0A0S2Z4Z9;Q15233 H7C367 H7C367 NONO Non-POU domain-containing octamer-binding protein MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 519.5882 3 519.587706 1555.74129 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.601 1 71.601 71.101 72.101 0 0 0 0 0.0015451 1 35996 46.704 29.503 1 4757 356 2448 2703 7795 7795 85 RMEELHNQEVQK 12 1 1 Oxidation (M) _RM(ox)EELHNQEVQK_ RM(1)EELHNQEVQK RM(54.02)EELHNQEVQK 0 1 0 1 H7C367;C9JYS8;A8K525;A0A0S2Z4Z9;Q15233 H7C367 H7C367 NONO Non-POU domain-containing octamer-binding protein MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 519.5881 3 519.587706 1555.74129 84356.84 0.32524 0.00016899 -0.33684 -0.00017502 -0.011598 -6.0263E-06 519.587833847759 525.929350326046 72.04 0.49644 72.04 71.838 72.335 0 113 44 5 0 0 0 0.012463 1 36517 54.023 35.446 1 1.5899 1.8573 0 34407000 13181000 21226000 4758 356 2448 2703 7796 7796 85 RMSPKPELTEEQK 13 2 1 Oxidation (M),Phospho (STY) _RM(ox)S(ph)PKPELTEEQK_ RM(1)SPKPELTEEQK RMS(1)PKPELTEEQK RM(127.61)SPKPELTEEQK RMS(68.46)PKPELT(-68.46)EEQK 0 1 1 2 P41208 P41208 P41208 CETN2 Centrin-2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 556.9272 3 556.926939 1667.75899 78716.51 0.51975 0.00028947 0.086304 4.8065E-05 0.60606 0.00033753 556.927208407117 565.605983684094 19.815 0.49411 19.815 19.574 20.068 0 134 20 9 0 0 0 1.9544E-17 1 6707 127.61 108.21 2 0.156 0.12559 0 233560000 199690000 33871000 4759 988 2449 2704 7797 7797 276 1750 RMSPKPELTEEQK 13 2 1 Oxidation (M),Phospho (STY) _RM(ox)S(ph)PKPELTEEQK_ RM(1)SPKPELTEEQK RMS(0.999)PKPELT(0.001)EEQK RM(72.47)SPKPELTEEQK RMS(29.16)PKPELT(-29.16)EEQK 0 1 1 2 P41208 P41208 P41208 CETN2 Centrin-2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 834.8871 2 834.88677 1667.75899 65351.62 0.75103 0.00062702 0.10229 8.5403E-05 0.85332 0.00071243 834.886937459607 847.905260591993 19.828 0.40187 19.828 19.644 20.046 0 98 18 8 0 0 0 0.00024746 1 6727 72.47 55.724 2 0.14466 0.11859 0 73595000 64409000 9185500 4760 988 2449 2704 7798 7798 276 1750 RMYSFDDVLEEGK 13 1 1 Oxidation (M),Phospho (STY) _RM(ox)YS(ph)FDDVLEEGK_ RM(1)YSFDDVLEEGK RMY(0.022)S(0.978)FDDVLEEGK RM(82.66)YSFDDVLEEGK RMY(-16.4)S(16.4)FDDVLEEGK 0 1 1 1 E9PMS6;B7Z8W3;A0A1P7ZIM8;A0A0A0MTE2;E9PMT2;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMP7;H0Y424;E9PJ10 E9PMS6 E9PMS6 LMO7 LIM domain only protein 7 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 851.8615 2 842.849853 1683.68515 NaN NaN NaN 0.18821 0.00015864 NaN NaN NaN NaN 106.34 0.53944 106.34 105.97 106.51 0 0 0 0 6.7797E-05 1 61776 82.663 47.979 2 NaN NaN 0 10211000 0 10211000 4761 391 2450 2705 7799 7799 99 667 RNDLDDPER 9 0 2 Unmodified _RNDLDDPER_ 0 0 0 1 A8K6V3;Q15393 A8K6V3 A8K6V3 SF3B3 Splicing factor 3B subunit 3 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 575.2742 2 565.265259 1128.51596 NaN NaN NaN -1.5183 -0.00085823 NaN NaN NaN NaN 67.849 0.12744 67.849 67.814 67.941 0 0 0 0 0.0095262 1 33513 56.916 28.698 1 NaN NaN 0 3509400 0 3509400 4762 485 2451 2706 7800 7800 RNEALPVTLGFQTPES 16 0 1 2 Phospho (STY) _RNEALPVTLGFQT(ph)PES(ph)_ RNEALPVT(0.002)LGFQT(0.998)PES(1) RNEALPVT(-27.03)LGFQT(27.03)PES(37.85) 0 0 2 1 A0A024R512;Q8IYA6 A0A024R512 A0A024R512 FLJ40629;CKAP2L Cytoskeleton-associated protein 2-like MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 964.9243 2 959.921013 1917.82747 62973.54 0.31196 0.00029945 0.25125 0.00024118 0.56321 0.00054063 959.921140695079 964.925383531377 133.06 0.66628 133.06 132.69 133.35 0 357 52 9 0 0 0 7.1328E-05 1 80792 50.831 44.39 3 0.35226 0.43816 0 36729000 27505000 9223600 4763 100 2452 2707 7801 7801 131;2634 RNEALPVTLGFQTPES 16 0 1 Phospho (STY) _RNEALPVTLGFQTPES(ph)_ RNEALPVTLGFQT(0.019)PES(0.98) RNEALPVT(-32.94)LGFQT(-17.11)PES(17.11) 0 0 1 1 A0A024R512;Q8IYA6 A0A024R512 A0A024R512 FLJ40629;CKAP2L Cytoskeleton-associated protein 2-like MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 924.9077 2 919.937848 1837.86114 62943.92 0.64874 0.0005968 -1.248 -0.0011481 -0.5993 -0.00055132 920.436899353385 925.442819549264 125.82 0.56243 125.82 125.61 126.17 0 111 49 4 0 0 0 0.00092154 1 76352 45.915 31.225 3 0.55153 0.60351 0 6152400 3084100 3068300 4764 100 2452 2708 7802 7802 131;2634 RNEALPVTLGFQTPES 16 0 1 Phospho (STY) _RNEALPVTLGFQTPES(ph)_ RNEALPVTLGFQT(0.006)PES(0.994) RNEALPVT(-46.69)LGFQT(-22.2)PES(22.2) 0 0 1 1 A0A024R512;Q8IYA6 A0A024R512 A0A024R512 FLJ40629;CKAP2L Cytoskeleton-associated protein 2-like MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 924.9437 2 919.937848 1837.86114 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.78 1 131.78 131.28 132.28 0 0 0 0 0.00023197 1 85025 56.205 41.514 3 4765 100 2452 2708 7803 7803 131;2634 RNEEEESTSQIERPLSQEPAK 21 1 2 Unmodified _RNEEEESTSQIERPLSQEPAK_ 0 0 0 2 Q5TCT4;A2A2V2;P42696 Q5TCT4 Q5TCT4 RBM34 RNA-binding protein 34 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 820.0692 3 819.733251 2456.17792 67461.16 1.2014 0.00098483 -0.025054 -2.0538E-05 1.1764 0.0009643 820.067289368982 829.411316341652 97.476 1.0863 97.476 96.748 97.835 0 461 90 8 0 0 0 0.00029707 3 55282 33.833 33.833 1 0.86957 1.0068 0 61663000 27291000 34373000 4766 404 2453 2709 7804;7805;7806 7806 RNEEEESTSQIERPLSQEPAK 21 1 2 Unmodified _RNEEEESTSQIERPLSQEPAK_ 0 0 0 2 Q5TCT4;A2A2V2;P42696 Q5TCT4 Q5TCT4 RBM34 RNA-binding protein 34 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 622.3113 4 615.051757 2456.17792 80531.07 0.9556 0.00058774 0.080781 4.9685E-05 1.0364 0.00063743 615.051739080733 622.310139237479 97.259 0.63103 97.259 97.011 97.642 7.6294E-06 125 54 5 0 0 0 9.0889E-07 1 55012 45.395 40.742 1 1.2242 1.3979 0 28145000 9925900 18219000 4767 404 2453 2709 7807 7807 RNEEEESTSQIERPLSQEPAKK 22 2 2 Unmodified _RNEEEESTSQIERPLSQEPAKK_ 0 0 0 3 Q5TCT4;A2A2V2;P42696 Q5TCT4 Q5TCT4 RBM34 RNA-binding protein 34 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 656.088 4 647.075498 2584.27289 76085.74 1.0583 0.00068482 0.086116 5.5724E-05 1.1444 0.00074054 647.32659845317 656.086786513137 108.03 0.8478 108.03 107.49 108.34 0 241 63 7 0 0 0 9.557E-09 2 62977 58.479 54.676 1 0.87152 0.8818 0 26237000 14405000 11833000 4768 404 2454 2710 7808;7809 7808 RNEIDAEPPAK 11 1 1 Unmodified _RNEIDAEPPAK_ 0 0 0 1 Q8TDN6;Q9NUW4;B4E0B8;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 620.3202 2 620.320034 1238.62551 75897.79 0.40564 0.00025163 0.35232 0.00021855 0.75797 0.00047018 620.320208726413 629.331411307272 68.344 1.2823 68.344 68.082 69.364 0 498 122 6 0 0 0 0.0025419 3 33709 73.067 55.258 1 0.94346 1.134 0 165510000 84523000 80985000 4769 1163 2455 2711 7810;7811;7812 7810 RNEIDAEPPAK 11 1 1 Unmodified _RNEIDAEPPAK_ 0 0 0 1 Q8TDN6;Q9NUW4;B4E0B8;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 413.8821 3 413.882448 1238.62551 96195.28 -0.15986 -6.6163E-05 0.16059 6.6466E-05 0.00073286 3.0332E-07 413.882426604075 419.889981683904 68.374 0.37492 68.374 68.152 68.527 0 88 34 4 0 0 0 0.010971 1 33899 34.898 30.744 1 0.93605 1.0658 0 22325000 11291000 11034000 4770 1163 2455 2711 7813 7813 RNEIDAEPPAK 11 1 1 Unmodified _RNEIDAEPPAK_ 0 0 0 1 Q8TDN6;Q9NUW4;B4E0B8;A0JLQ5 Q8TDN6 Q8TDN6 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 629.3314 2 620.320034 1238.62551 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.163 1 69.163 68.663 69.663 0 0 0 0 0.0061515 1 34405 66.435 37.708 1 4771 1163 2455 2711 7814 7814 RNGWEESR 8 0 2 Unmodified _RNGWEESR_ 0 0 0 1 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 517.2441 2 517.244129 1032.47371 NaN NaN NaN -0.011971 -6.1917E-06 NaN NaN NaN NaN 69.405 0.15376 69.405 69.319 69.473 0 0 0 0 0.015298 1 34555 48.794 3.7128 1 NaN NaN 0 5295800 5295800 0 4772 1060 2456 2712 7815 7815 RNISKLSPPR 10 1 2 Phospho (STY) _RNISKLS(ph)PPR_ RNIS(0.019)KLS(0.981)PPR RNIS(-17.1)KLS(17.1)PPR 0 0 1 2 Q6P0N0;G5E9K5;H7C1S6 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 416.5591 3 416.55885 1246.65472 91771.01 0.099089 4.1277E-05 -0.022868 -9.5259E-06 0.076221 3.1751E-05 416.558806848994 425.902399205043 28.736 3.2822 28.736 27.39 30.672 0 870 229 7 0 0 0 0.0063377 1 14428 42.426 30.893 2 1.142 1.0496 0 49868000 23208000 26660000 4773 1120 2457 2713 7816 7816 2130 RNPDTQWITK 10 1 1 Unmodified _RNPDTQWITK_ 0 0 0 1 A0A024R2Q4;P61313;E7EQV9;E7ENU7 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 638.8418 2 629.830569 1257.64658 NaN NaN NaN 0.50144 0.00031582 NaN NaN NaN NaN 95.243 0.80325 95.243 94.962 95.766 -7.6294E-06 0 0 0 6.7246E-15 2 53463 105.4 53.401 1 NaN NaN 0 83747000 0 83747000 4774 68 2458 2714 7817;7818 7817 RNPWSDSESDR 11 0 2 Phospho (STY) _RNPWS(ph)DSESDR_ RNPWS(1)DSESDR RNPWS(34.11)DS(-34.11)ES(-55.81)DR 0 0 1 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 714.781 2 714.780619 1427.54669 73035.27 0.68072 0.00048657 -0.054425 -3.8902E-05 0.6263 0.00044767 714.780462991262 724.788797121213 65.009 0.41335 65.009 64.776 65.189 0 100 29 6 0 0 0 0.00019602 2 31121 85.837 64.181 3 0.37206 0.4614 0 40381000 29052000 11329000 4775 962 2459 2715 7819;7820 7819 1699 RNQKPEVR 8 1 2 Unmodified _RNQKPEVR_ 0 0 0 2 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 342.8643 3 342.864952 1025.57303 102166.8 -0.30335 -0.00010401 0.052247 1.7914E-05 -0.2511 -8.6094E-05 342.864904083349 352.208515207691 71.401 1.6606 71.401 70.74 72.401 0 504 148 5 0 0 0 0.00066129 4 35795 101.6 73.718 1 0.59088 0.68592 0 71388000 41392000 29996000 4776 745 2460 2716 7821;7822;7823;7824 7822 RNQKPEVR 8 1 2 Unmodified _RNQKPEVR_ 0 0 0 2 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 352.2082 3 342.864952 1025.57303 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.418 1 72.418 71.918 72.918 0 0 0 0 0.018026 1 36626 51.346 32.252 1 4777 745 2460 2716 7825 7825 RNQKPEVR 8 1 2 Unmodified _RNQKPEVR_ 0 0 0 2 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 352.2082 3 342.864952 1025.57303 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.1 1 73.1 72.6 73.6 0 0 0 0 0.033894 1 37166 41.448 29.401 1 4778 745 2460 2716 7826 7826 RNQSFCPTVNLDK 13 1 1 Unmodified _RNQSFCPTVNLDK_ 0 0 0 1 Q9BQQ5;E9PLL6;Q6NZ52;P46776;E9PJD9 Q9BQQ5 Q9BQQ5 L27a;RPL27A 60S ribosomal protein L27a ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 532.9363 3 526.927951 1577.76202 NaN NaN NaN 0.31075 0.00016374 NaN NaN NaN NaN 100.79 0.59615 100.79 100.51 101.11 0 0 0 0 0.0079538 1 57946 38.44 24.723 1 NaN NaN 0 11397000 0 11397000 4779 813 2461 2717 7827 7827 RNQSFCPTVNLDK 13 1 1 Unmodified _RNQSFCPTVNLDK_ 0 0 0 1 Q9BQQ5;E9PLL6;Q6NZ52;P46776;E9PJD9 Q9BQQ5 Q9BQQ5 L27a;RPL27A 60S ribosomal protein L27a MULTI-SECPEP 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 526.5723 3 526.927951 1577.76202 85501.75 0.9117 0.0004804 -0.42123 -0.00022196 0.49046 0.00025844 526.927871211145 532.935247624734 69.25 0.34624 69.25 69.066 69.413 0 105 28 5 0 0 0 0.019107 1 43502 27.58 22.195 1 0.72378 0.65425 0 5323100 3453600 1869500 4780 813 2461 2717 7828 7828 RNSISDDDTDSEDELR 16 0 2 2 Phospho (STY) _RNSISDDDT(ph)DS(ph)EDELR_ RNS(0.001)IS(0.001)DDDT(0.998)DS(0.999)EDELR RNS(-31.89)IS(-31.31)DDDT(31.31)DS(35.45)EDELR 0 0 2 1 A0A024R250;Q76FK4;B4DM91;F8WE42;Q6AI50;F5H101;A6H8Z4;F5GWN9 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1013.8676 2 1013.86736 2025.72017 60366.96 0.24135 0.0002447 0.22483 0.00022794 0.46618 0.00047264 1013.86729627115 1023.87570617765 59.344 0.79373 59.344 58.895 59.689 -3.8147E-06 270 62 5 0 0 0 8.3565E-05 1 26502 49.463 35.654 6 0.8489 1.0378 0 22500000 10375000 12126000 4781 59 2462 2718 7829 7829 78;2622 RNSVERPAEPVAGAATPSLVEQQK 24 1 2 Phospho (STY) _RNS(ph)VERPAEPVAGAATPSLVEQQK_ RNS(1)VERPAEPVAGAATPSLVEQQK RNS(35.81)VERPAEPVAGAAT(-35.81)PS(-41.26)LVEQQK 0 0 1 2 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 872.4387 3 872.104341 2613.29119 65883.56 0.9176 0.00080024 0.061345 5.35E-05 0.97894 0.00085374 872.438807410886 881.781984726513 94.319 1.2172 94.319 94.053 95.27 0 412 98 7 0 0 0 2.0465E-06 2 52612 43.38 35.576 3 0.56609 0.65459 0 57299000 34554000 22745000 4782 1195 2463 2719 7830;7831 7831 2369 RNSVERPAEPVAGAATPSLVEQQK 24 1 2 Phospho (STY) _RNS(ph)VERPAEPVAGAATPSLVEQQK_ RNS(1)VERPAEPVAGAATPSLVEQQK RNS(36.13)VERPAEPVAGAAT(-36.13)PS(-47.25)LVEQQK 0 0 1 2 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 654.5807 4 654.330075 2613.29119 76035.54 1.078 0.0007054 -0.48157 -0.00031511 0.59647 0.00039029 654.580433566192 661.337711270289 94.279 0.82632 94.279 94.029 94.855 7.6294E-06 172 65 6 0 0 0 4.5262E-08 2 52901 50.029 42.226 3 0.53138 0.60528 0 24448000 15572000 8876600 4783 1195 2463 2719 7832;7833 7833 2369 RNSVERPAEPVAGAATPSLVEQQK 24 1 2 Phospho (STY) _RNS(ph)VERPAEPVAGAATPSLVEQQK_ RNS(1)VERPAEPVAGAATPSLVEQQK RNS(39.81)VERPAEPVAGAAT(-39.81)PS(-47.58)LVEQQK 0 0 1 2 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 872.4401 3 872.104341 2613.29119 64843.67 1.1194 0.00097625 0.17609 0.00015357 1.2955 0.0011298 872.438800394481 881.782391025338 77.706 1.5171 77.706 77.13 78.647 0 1156 141 12 0 0 0 2.9041E-08 1 49839 51.398 51.398 3 1.618 1.4054 0 224270000 86595000 137670000 4784 1195 2463 2719 7834 7834 2369 RNTLQLHR 8 0 2 Unmodified _RNTLQLHR_ 0 0 0 1 A0A024R2Q4;P61313;B4DLP4 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 346.5372 3 346.536946 1036.58901 101346.2 0.12636 4.3789E-05 0.37763 0.00013086 0.50399 0.00017465 346.537054735531 353.209209008225 97.436 1.7203 97.436 96.813 98.534 -7.6294E-06 292 144 4 0 0 0 0.0028352 3 55371 67.464 39.728 1 0.97157 1.2058 0 48571000 22455000 26116000 4785 68 2464 2720 7835;7836;7837 7837 RNTLQLHR 8 0 2 Unmodified _RNTLQLHR_ 0 0 0 1 A0A024R2Q4;P61313;B4DLP4 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 353.2099 3 346.536946 1036.58901 NaN NaN NaN 0.23548 8.1604E-05 NaN NaN NaN NaN 97.323 0.90342 97.323 96.557 97.461 0 0 0 0 0.006678 1 54675 57.96 26.025 1 NaN NaN 0 22150000 0 22150000 4786 68 2464 2720 7838 7838 RPAEATSSPTSPERPR 16 0 3 Phospho (STY) _RPAEATSSPTS(ph)PERPR_ RPAEATS(0.004)S(0.004)PT(0.209)S(0.782)PERPR RPAEAT(-38.07)S(-22.83)S(-22.83)PT(-5.72)S(5.72)PERPR 0 0 1 2 Q9BU76 Q9BU76 Q9BU76 MMTAG2 Multiple myeloma tumor-associated protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 455.4678 4 455.467811 1817.84214 88731.13 0.38799 0.00017672 -0.52102 -0.00023731 -0.13303 -6.059E-05 455.718365172545 463.224215395915 60.884 0.3412 60.884 60.723 61.064 0 74 23 6 0 0 0 3.9093E-05 1 27867 56.081 56.081 5 0.73252 0.85527 0 22773000 10856000 11917000 4787 1197 2465 2721 7839 7839 2376;2377 RPAEATSSPTSPERPR 16 0 3 2 Phospho (STY) _RPAEATSS(ph)PTS(ph)PERPR_ RPAEAT(0.083)S(0.373)S(0.542)PT(0.2)S(0.801)PERPR RPAEAT(-8.33)S(-1.78)S(1.78)PT(-6.43)S(6.43)PERPR 0 0 2 2 Q9BU76 Q9BU76 Q9BU76 MMTAG2 Multiple myeloma tumor-associated protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 633.944 3 633.6101 1897.80847 75625.98 0.97577 0.00061826 0.076429 4.8426E-05 1.0522 0.00066668 633.610496305543 643.618538902802 18.071 1.2477 18.071 17.8 19.048 0 272 57 9 0 0 0 8.5994E-05 1 5149 49.592 43.011 10 1.2891 1.4822 0 908870000 353540000 555330000 4788 1197 2465 2722 7840 7840 2376;2377 RPAEATSSPTSPERPR 16 0 3 2 Phospho (STY) _RPAEATSS(ph)PTS(ph)PERPR_ RPAEAT(0.299)S(0.401)S(0.449)PT(0.331)S(0.52)PERPR RPAEAT(-3.29)S(-0.82)S(0.82)PT(-3.29)S(3.29)PERPR 0 0 2 2 Q9BU76 Q9BU76 Q9BU76 MMTAG2 Multiple myeloma tumor-associated protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 950.4147 2 949.911511 1897.80847 61839.9 0.63819 0.00060622 0.37981 0.00036078 1.018 0.000967 949.911793046946 964.924313399462 18.071 1.0636 18.071 17.678 18.741 0 197 46 10 0 0 0 7.245E-05 1 5168 49.535 49.535 10 1.3204 1.5183 0 363700000 146210000 217480000 4789 1197 2465 2722 7841 7841 2376;2377 RPAEDMEEEQAFK 13 1 1 Oxidation (M) _RPAEDM(ox)EEEQAFK_ RPAEDM(1)EEEQAFK RPAEDM(45.97)EEEQAFK 0 1 0 1 Q5T6W2;B4DUQ1;B4DFF1;A0A024R228;Q5EC54;P61978;S4R457 Q5T6W2 Q5T6W2 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 807.296 2 798.353945 1594.69334 NaN NaN NaN 0.49457 0.00039485 NaN NaN NaN NaN 73.078 0.69424 73.078 72.686 73.38 0 0 0 0 0.0024258 1 37050 45.972 8.8608 1 NaN NaN 0 12176000 0 12176000 4790 56 2466 2723 7842 7842 13 RPAEDTDRETVAGIPNK 17 1 2 Unmodified _RPAEDTDRETVAGIPNK_ 0 0 0 2 Q8NBP1;F8W108;F8WCU9;Q68CP9;F8VWP4 Q8NBP1 Q8NBP1 ARID2 AT-rich interactive domain-containing protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 623.9886 3 623.653544 1867.9388 78866.39 1.1079 0.00069097 0.28299 0.00017649 1.3909 0.00086746 623.987969045199 632.99743924618 93.513 0.45773 93.513 93.368 93.826 0 94 37 4 0 0 0 0.022643 1 52242 19.297 13.582 1 0.59708 0.67276 0 16008000 6551700 9456100 4791 831 2467 2724 7843 7843 RPAEDTDRETVAGIPNK 17 1 2 Unmodified _RPAEDTDRETVAGIPNK_ 0 0 0 2 Q8NBP1;F8W108;F8WCU9;Q68CP9;F8VWP4 Q8NBP1 Q8NBP1 ARID2 AT-rich interactive domain-containing protein 2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 623.6551 3 623.653544 1867.9388 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.424 1 93.424 92.924 93.924 -7.6294E-06 0 0 0 0.008586 1 52066 37.083 11.366 1 4792 831 2467 2724 7844 7844 RPDDVPLSLSPSK 13 1 1 Phospho (STY) _RPDDVPLSLS(ph)PSK_ RPDDVPLSLS(0.999)PS(0.001)K RPDDVPLS(-53.88)LS(30.72)PS(-30.72)K 0 0 1 1 A0A140VJD0;Q9UFC0;F8WDB4 A0A140VJD0 A0A140VJD0 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 754.8793 2 745.866163 1489.71777 71102.18 1.0263 0.00076548 -0.10219 -7.6218E-05 0.92411 0.00068926 745.866064155751 754.87727902806 95.029 1.605 95.029 94.726 96.331 7.6294E-06 635 140 8 0 0 0 1.9605E-33 4 53706 150.37 150.37 3 1.4219 1.7172 0 238800000 102410000 136390000 4793 375 2468 2725 7845;7846;7847;7848 7848 596;597 RPDDVPLSLSPSK 13 1 1 Phospho (STY) _RPDDVPLSLS(ph)PSK_ RPDDVPLS(0.047)LS(0.882)PS(0.072)K RPDDVPLS(-12.75)LS(10.9)PS(-10.9)K 0 0 1 1 A0A140VJD0;Q9UFC0;F8WDB4 A0A140VJD0 A0A140VJD0 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 754.8781 2 745.866163 1489.71777 69598.73 0.86668 0.00064642 0.26218 0.00019555 1.1289 0.00084198 745.866385535706 754.877544807512 84.323 1.6413 84.323 83.54 85.181 0 1058 148 9 0 0 0 0.0021119 1 54295 56.339 49.956 3 1.5449 1.1933 0 139030000 55343000 83685000 4794 375 2468 2725 7849 7849 596;597 RPDDVPLSLSPSK 13 1 1 2 Phospho (STY) _RPDDVPLS(ph)LS(ph)PSK_ RPDDVPLS(0.997)LS(0.598)PS(0.405)K RPDDVPLS(22.95)LS(1.7)PS(-1.7)K 0 0 2 1 A0A140VJD0;Q9UFC0;F8WDB4 A0A140VJD0 A0A140VJD0 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 795.3621 2 785.849329 1569.6841 69236.96 1.1665 0.00091668 -0.64117 -0.00050386 0.52531 0.00041282 785.849256966682 794.860290697907 98.878 1.3074 98.878 98.269 99.577 0 540 124 7 0 0 0 0.0014646 1 63693 55.097 48.078 3 1.7205 1.3132 0 20859000 6725800 14134000 4795 375 2468 2726 7850 7850 596;597 RPDHSGGSPSPPTSEPAR 18 0 2 2 Phospho (STY) _RPDHSGGS(ph)PS(ph)PPTSEPAR_ RPDHS(0.493)GGS(0.758)PS(0.739)PPT(0.007)S(0.003)EPAR RPDHS(-2.92)GGS(3.26)PS(2.92)PPT(-23.33)S(-27.04)EPAR 0 0 2 1 B4DLV6;B4DDK7;B1AK66;Q8TAD8 B4DLV6 B4DLV6 SNIP1 Smad nuclear-interacting protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 671.2778 3 664.605126 1990.79355 73593.74 0.78793 0.00052366 0.23862 0.00015859 1.0266 0.00068225 664.605261050876 671.27762374603 19.451 1.0866 19.451 18.982 20.068 0 362 48 11 0 0 0 7.4648E-05 1 6295 44.683 35.519 10 0.71129 0.62043 0 164700000 99059000 65638000 4796 517 2469 2727 7851 7851 881;882 RPDHSGGSPSPPTSEPAR 18 0 2 2 Phospho (STY) _RPDHSGGS(ph)PS(ph)PPTSEPAR_ RPDHS(0.4)GGS(0.611)PS(0.788)PPT(0.107)S(0.094)EPAR RPDHS(-1.95)GGS(1.95)PS(8.85)PPT(-8.85)S(-9.42)EPAR 0 0 2 1 B4DLV6;B4DDK7;B1AK66;Q8TAD8 B4DLV6 B4DLV6 SNIP1 Smad nuclear-interacting protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 996.4047 2 996.404051 1990.79355 59930.01 0.11814 0.00011771 0.28122 0.00028021 0.39936 0.00039792 996.905488129995 1006.41318699236 19.438 0.87091 19.438 19.048 19.919 0 236 38 9 0 0 0 2.1897E-06 1 6370 54.764 44.707 10 0.72838 0.63216 0 59531000 34302000 25229000 4797 517 2469 2727 7852 7852 881;882 RPDPDSDEDEDYERER 16 0 3 Phospho (STY) _RPDPDS(ph)DEDEDYERER_ RPDPDS(1)DEDEDYERER RPDPDS(53.91)DEDEDY(-53.91)ERER 0 0 1 2 Q5W011;Q5W010;H0Y6J6;Q5W012;Q5W009;Q96I25 Q5W011 Q5W011 RBM17 Splicing factor 45 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 701.6021 3 701.602677 2101.7862 73337.42 0.82894 0.00058159 -0.26283 -0.0001844 0.56611 0.00039719 701.601779851429 711.610949172585 61.545 0.429 61.545 61.269 61.698 -3.8147E-06 116 32 7 0 0 0 2.2288E-05 1 28401 65.808 65.808 2 1.6512 1.922 0 37598000 15656000 21943000 4798 852 2470 2728 7853 7853 1462 RPELLTHSTTEVTQPR 16 0 2 Unmodified _RPELLTHSTTEVTQPR_ 0 0 0 1 X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347;B4DRA9 X5D2J9 X5D2J9 GTF2I General transcription factor II-I ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 629.3406 3 622.334035 1863.98027 NaN NaN NaN -1.5288 -0.00095143 NaN NaN NaN NaN 108.33 0.4563 108.33 108.08 108.54 7.6294E-06 0 0 0 0.0015593 1 63508 42.813 31.373 1 NaN NaN 0 8563600 0 8563600 4799 506 2471 2729 7854 7854 RPEPSSDYDLSPAK 14 1 1 Phospho (STY) _RPEPSSDYDLS(ph)PAK_ RPEPS(0.001)S(0.001)DY(0.004)DLS(0.993)PAK RPEPS(-28.23)S(-28.23)DY(-23.59)DLS(23.59)PAK 0 0 1 1 E3UVQ2;H9A532;Q6W2J9;H7C231;H7BZ37;H7C2V9;A6NE70;B3KTC2 E3UVQ2 E3UVQ2 BCOR-RARA;BCOR BCL-6 corepressor MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 821.3635 2 821.361442 1640.70833 68408.61 0.71585 0.00058797 -0.13256 -0.00010888 0.58329 0.00047909 821.361333943114 830.372520232069 70.95 0.68006 70.95 70.526 71.206 7.6294E-06 215 66 5 0 0 0 0.0012798 1 35381 46.964 37.532 4 0.63971 0.74614 0 32982000 17587000 15395000 4800 781 2472 2730 7855 7855 1324 RPEPSSDYDLSPAK 14 1 1 Phospho (STY) _RPEPSSDYDLS(ph)PAK_ RPEPSSDYDLS(0.999)PAK RPEPS(-38.18)S(-38.18)DY(-36.84)DLS(36.84)PAK 0 0 1 1 E3UVQ2;H9A532;Q6W2J9;H7C231;H7BZ37;H7C2V9;A6NE70;B3KTC2 E3UVQ2 E3UVQ2 BCOR-RARA;BCOR BCL-6 corepressor MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 830.3732 2 821.361442 1640.70833 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.659 1 70.659 70.159 71.159 0 0 0 0 1.6316E-06 1 35358 63.624 48.938 4 4801 781 2472 2730 7856 7856 1324 RPESPSEISPIK 12 1 1 2 Phospho (STY) _RPES(ph)PSEIS(ph)PIK_ RPES(0.99)PS(0.477)EIS(0.532)PIK RPES(17.39)PS(-0.48)EIS(0.48)PIK 0 0 2 1 A8K273;B2RTX8;Q7Z5K2 A8K273 A8K273 WAPAL Wings apart-like protein homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 759.8445 2 750.330772 1498.64699 70189.73 0.65836 0.00049399 -0.14265 -0.00010703 0.51571 0.00038696 750.330646085558 759.341934023448 66.839 0.75565 66.839 66.531 67.286 0 284 56 6 0 0 0 0.0020947 2 32514 59.709 37.653 3 0.84713 1.0079 0 75687000 43053000 32634000 4802 449 2473 2731 7857;7858 7858 780;781 RPGFSPTSHR 10 0 2 Phospho (STY) _RPGFS(ph)PTSHR_ RPGFS(1)PTSHR RPGFS(36.75)PT(-36.75)S(-60.88)HR 0 0 1 1 Q53SY8;H0Y4Q6;Q8WUA4 Q53SY8 Q53SY8 GTF3C2 General transcription factor 3C polypeptide 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 407.8557 3 407.855666 1220.54517 92120.55 -0.17939 -7.3165E-05 -0.20863 -8.5091E-05 -0.38802 -0.00015826 407.855528626971 414.527698286883 66.758 0.38577 66.758 66.578 66.964 7.6294E-06 142 26 8 0 0 0 7.5244E-07 1 32602 103.46 94.029 3 0.71765 0.89548 0 177800000 102150000 75648000 4803 849 2474 2732 7859 7859 1460 RPGFSPTSHR 10 0 2 Phospho (STY) _RPGFS(ph)PTSHR_ RPGFS(0.988)PT(0.011)S(0.001)HR RPGFS(19.54)PT(-19.54)S(-32.06)HR 0 0 1 1 Q53SY8;H0Y4Q6;Q8WUA4 Q53SY8 Q53SY8 GTF3C2 General transcription factor 3C polypeptide 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 414.5278 3 407.855666 1220.54517 91067.02 0.061844 2.5224E-05 -0.016003 -6.5267E-06 0.045842 1.8697E-05 407.855652030552 414.52783989737 18.555 0.52164 18.555 18.403 18.924 0 121 24 9 0 0 0 0.0014354 1 5602 66.023 56.335 3 1.3029 1.1352 0 132880000 58348000 74530000 4804 849 2474 2732 7860 7860 1460 RPGHDDGQRPSGGAAAAPR 19 0 3 Unmodified _RPGHDDGQRPSGGAAAAPR_ 0 0 0 2 R9S3C3;Q8N726 R9S3C3 R9S3C3 p14ARF;CDKN2A Tumor suppressor ARF ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 468.984 4 468.984752 1871.9099 NaN NaN NaN 0.45929 0.0002154 NaN NaN NaN NaN 78.855 0.22618 78.855 78.758 78.984 -7.6294E-06 0 0 0 0.010289 1 41482 26.352 14.976 1 NaN NaN 0 9734900 9734900 0 4805 1152 2475 2733 7861 7861 RPIAIKSPK 9 2 1 Phospho (STY) _RPIAIKS(ph)PK_ RPIAIKS(1)PK RPIAIKS(46.88)PK 0 0 1 2 O95714;B7Z294;B7Z2K1;Q9BVR0 O95714 O95714 HERC2;HERC2P3 E3 ubiquitin-protein ligase HERC2;Putative HERC2-like protein 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 363.8779 3 363.87752 1088.61073 96801 0.052467 1.9092E-05 0.055544 2.0211E-05 0.10801 3.9303E-05 363.87751308925 372.556368607554 19.588 0.29716 19.588 19.444 19.741 0 54 13 6 0 0 0 0.0058204 1 6530 46.88 33.843 1 1.0908 0.91621 0 15715000 6913300 8801600 4806 951 2476 2734 7862 7862 1650 RPIENAAQIPVATPQVSPNTVK 22 1 1 Phospho (STY) _RPIENAAQIPVATPQVS(ph)PNTVK_ RPIENAAQIPVAT(0.003)PQVS(0.771)PNT(0.226)VK RPIENAAQIPVAT(-24.08)PQVS(5.33)PNT(-5.33)VK 0 0 1 1 B9EGR5 B9EGR5 B9EGR5 MGA MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 804.4232 3 804.087851 2409.24172 69485.19 1.063 0.00085478 -0.56882 -0.00045738 0.49422 0.0003974 804.421958589766 810.428587764935 105.85 0.45648 105.85 105.61 106.06 0 139 30 6 0 0 0 6.3098E-13 1 61450 64.701 64.701 3 0.59014 0.66827 0 20788000 13026000 7762000 4807 732 2477 2735 7863 7863 1225 RPNKPAELIAK 11 2 1 Unmodified _RPNKPAELIAK_ 0 0 0 2 B4DKT2;B2RBV7;A0A0A0MR50;K4DI93;Q13619;Q13620 B4DKT2 B4DKT2 CUL4A;CUL4B Cullin-4A;Cullin-4B ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 412.9188 3 412.918945 1235.73501 NaN NaN NaN -0.21597 -8.9178E-05 NaN NaN NaN NaN 111.9 1.3954 111.9 111.14 112.54 0 0 0 0 3.0964E-06 2 66409 90.653 69.865 1 NaN NaN 0 18468000 18468000 0 4808 282 2478 2736 7864;7865 7865 RPPEDDFR 8 0 2 Unmodified _RPPEDDFR_ 0 0 0 1 B9ZVT1;Q8IXT5 B9ZVT1 B9ZVT1 RBM12B RNA-binding protein 12B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 526.2574 2 516.24888 1030.48321 88577.51 0.4482 0.00023138 0.31609 0.00016318 0.76429 0.00039456 516.249113658515 526.257118956724 77.018 0.64651 77.018 76.638 77.284 0 142 55 4 0 0 0 0.032068 1 40076 63.419 39.264 1 1.1656 1.4339 0 27386000 12598000 14787000 4809 733 2479 2737 7866 7866 RPPNSVVTQHEPAGQNEK 18 1 1 Unmodified _RPPNSVVTQHEPAGQNEK_ 0 0 0 1 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 663.6702 3 663.336327 1986.98715 74296.31 0.93327 0.00061907 -0.35535 -0.00023572 0.57792 0.00038335 663.336166106203 669.343503576385 75.474 0.90782 75.474 74.959 75.867 -7.6294E-06 408 76 9 0 0 0 9.4799E-06 1 38609 52.814 41.998 1 0.7095 0.84902 0 117700000 68726000 48976000 4810 560 2480 2738 7867 7867 RPPNSVVTQHEPAGQNEK 18 1 1 Unmodified _RPPNSVVTQHEPAGQNEK_ 0 0 0 1 B2RMQ4;Q8WWK9 B2RMQ4 B2RMQ4 CKAP2 Cytoskeleton-associated protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 669.6789 3 663.336327 1986.98715 74810.74 0.88917 0.00058982 0.19478 0.00012921 1.0839 0.00071902 663.670652637912 669.678308484419 18.427 0.26186 18.427 18.304 18.566 1.9073E-06 53 11 6 0 0 0 0.003868 2 5565 26.344 21.342 1 1.3444 1.1466 0 7553600 3738700 3814900 4811 560 2480 2738 7868;7869 7869 RPPPEHFR 8 0 2 Unmodified _RPPPEHFR_ 0 0 0 1 B9ZVT1;Q8IXT5 B9ZVT1 B9ZVT1 RBM12B RNA-binding protein 12B MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 352.5264 3 345.854276 1034.541 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.928 1 91.928 91.428 92.428 0 0 0 0 0.030855 1 50906 40.002 22.182 1 4812 733 2481 2739 7870 7870 RPPQEHFR 8 0 2 Unmodified _RPPQEHFR_ 0 0 0 1 B9ZVT1;Q8IXT5 B9ZVT1 B9ZVT1 RBM12B RNA-binding protein 12B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 362.8618 3 356.189547 1065.54681 102665.8 -0.42102 -0.00014996 0.32679 0.0001164 -0.094238 -3.3567E-05 356.189454778683 362.861839593309 83.318 0.80246 83.318 83.125 83.927 0 219 74 6 0 0 0 0.0017689 2 44644 91.069 71.282 1 0.97047 1.2042 0 46147000 22994000 23153000 4813 733 2482 2740 7871;7872 7872 RPPSPDVIVLSDNEQPSSPR 20 0 2 2 Phospho (STY) _RPPS(ph)PDVIVLS(ph)DNEQPSSPR_ RPPS(1)PDVIVLS(0.957)DNEQPS(0.031)S(0.011)PR RPPS(40.09)PDVIVLS(14.86)DNEQPS(-14.86)S(-19.25)PR 0 0 2 1 A0A024R7K7;A0A024R7M6;Q86YP4;C9JMI3;C9JGN4;C9JHD7;C9JJK9 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 784.0206 3 784.020717 2349.04032 68536.2 1.3375 0.0010487 0.36778 0.00028835 1.7053 0.001337 784.355366479812 790.693591025611 96.558 1.2189 96.558 95.908 97.127 7.6294E-06 421 101 6 0 0 0 1.481E-05 2 54126 48.18 44.781 6 0.6496 0.80515 0 35292000 20801000 14491000 4814 136 2483 2741 7873;7874 7873 204;205;206;207 RPPSPDVIVLSDNEQPSSPR 20 0 2 2 Phospho (STY) _RPPS(ph)PDVIVLSDNEQPS(ph)SPR_ RPPS(1)PDVIVLS(0.02)DNEQPS(0.49)S(0.49)PR RPPS(45.15)PDVIVLS(-13.96)DNEQPS(0)S(0)PR 0 0 2 1 A0A024R7K7;A0A024R7M6;Q86YP4;C9JMI3;C9JGN4;C9JHD7;C9JJK9 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 790.6939 3 784.020717 2349.04032 67756.77 1.4951 0.0011722 -0.31887 -0.00025 1.1762 0.00092218 784.354835590687 790.692656243858 101.46 1.4047 101.46 100.76 102.16 0 874 115 11 0 0 0 1.6912E-07 2 57989 57.496 50.734 6 0.78784 0.98591 0 356450000 201270000 155180000 4815 136 2483 2741 7875;7876 7875 204;205;206;207 RPPSPDVIVLSDNEQPSSPR 20 0 2 Phospho (STY) _RPPS(ph)PDVIVLSDNEQPSSPR_ RPPS(1)PDVIVLSDNEQPSSPR RPPS(53.67)PDVIVLS(-53.67)DNEQPS(-66.03)S(-65.89)PR 0 0 1 1 A0A024R7K7;A0A024R7M6;Q86YP4;C9JMI3;C9JGN4;C9JHD7;C9JJK9 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 764.037 3 757.365273 2269.07399 70511.95 1.1339 0.0008588 -0.2366 -0.00017919 0.89734 0.00067961 757.699226496195 764.371789336269 99.513 0.87528 99.513 98.912 99.787 7.6294E-06 331 76 6 0 0 0 2.9219E-09 1 56867 69.763 60.94 4 0.85379 1.0574 0 33758000 16993000 16765000 4816 136 2483 2742 7877 7877 204;205;206;207 RPPSPDVIVLSDNEQPSSPR 20 0 2 Phospho (STY) _RPPS(ph)PDVIVLSDNEQPSSPR_ RPPS(0.999)PDVIVLSDNEQPSSPR RPPS(33.47)PDVIVLS(-33.47)DNEQPS(-43.05)S(-43.05)PR 0 0 1 1 A0A024R7K7;A0A024R7M6;Q86YP4;C9JMI3;C9JGN4;C9JHD7;C9JJK9 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 764.038 3 757.365273 2269.07399 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.892 1 98.892 98.392 99.392 0 0 0 0 0.0022868 1 56289 44.238 29.819 4 4817 136 2483 2742 7878 7878 204;205;206;207 RPPSPDVIVLSDNEQPSSPR 20 0 2 Phospho (STY) _RPPSPDVIVLSDNEQPS(ph)SPR_ RPPSPDVIVLSDNEQPS(0.644)S(0.356)PR RPPS(-75.04)PDVIVLS(-40.72)DNEQPS(2.57)S(-2.57)PR 0 0 1 1 A0A024R7K7;A0A024R7M6;Q86YP4;C9JMI3;C9JGN4;C9JHD7;C9JJK9 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 764.0425 3 757.365273 2269.07399 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.8 1 103.8 103.3 104.3 0 0 0 0 1.9708E-10 1 59997 78.098 61.792 4 4818 136 2483 2742 7879 7879 204;205;206;207 RPPSPDVIVLSDNEQPSSPR 20 0 2 3 Phospho (STY) _RPPS(ph)PDVIVLS(ph)DNEQPS(ph)SPR_ RPPS(1)PDVIVLS(1)DNEQPS(0.628)S(0.372)PR RPPS(74.92)PDVIVLS(37.9)DNEQPS(2.28)S(-2.28)PR 0 0 3 1 A0A024R7K7;A0A024R7M6;Q86YP4;C9JMI3;C9JGN4;C9JHD7;C9JJK9 A0A024R7K7 A0A024R7K7 GATAD2A Transcriptional repressor p66-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 817.6854 3 810.67616 2429.00665 67008.63 1.4769 0.0011973 -0.34795 -0.00028207 1.129 0.00091524 811.010145989185 817.348029466115 101.46 1.479 101.46 100.83 102.31 0 987 121 11 0 0 0 3.2615E-14 3 58656 82.62 73.936 4 0.61526 0.77124 0 534680000 329830000 204850000 4819 136 2483 2743 7880;7881;7882 7882 204;205;206;207 RPSCGQLSSHPGPLPGCQDSDEVR 24 0 2 Unmodified _RPSCGQLSSHPGPLPGCQDSDEVR_ 0 0 0 1 M0R014 M0R014 M0R014 RYR1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 886.4084 3 879.402854 2635.18673 63717.66 0.98807 0.00086891 -0.82901 -0.00072903 0.15906 0.00013988 879.736851832303 886.40797299433 95.631 0.73749 95.631 95.292 96.03 0 446 66 9 0 0 0 0.030788 1 53981 12.314 12.314 1 0.76848 0.95699 0 109460000 56066000 53390000 4820 912 2484 2744 7883 7883 RPSCGQLSSHPGPLPGCQDSDEVR 24 0 2 Unmodified _RPSCGQLSSHPGPLPGCQDSDEVR_ 0 0 0 1 M0R014 M0R014 M0R014 RYR1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 886.0746 3 879.402854 2635.18673 63718.32 1.1834 0.0010407 -1.7194 -0.001512 -0.53598 -0.00047134 879.735693385201 886.40768928342 96.51 1.4558 96.51 95.947 97.402 0 1007 122 12 0 0 0 0.00092537 2 54095 26.627 13.035 1 0.74466 0.93174 0 344500000 198180000 146330000 4821 912 2484 2744 7884;7885 7884 RPSCGQLSSHPGPLPGCQDSDEVR 24 0 2 Unmodified _RPSCGQLSSHPGPLPGCQDSDEVR_ 0 0 0 1 M0R014 M0R014 M0R014 RYR1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 886.4088 3 879.402854 2635.18673 63462.13 0.91983 0.0008089 -1.3302 -0.0011698 -0.4104 -0.00036091 879.736074067735 886.407977834508 96.947 3.271 96.947 95.441 98.712 0 2381 313 14 0 0 0 0.010041 1 62386 18.881 5.5601 1 0.5502 0.48347 0 732170000 479100000 253070000 4822 912 2484 2744 7886 7886 RPTDYFAEMAK 11 1 1 Oxidation (M) _RPTDYFAEM(ox)AK_ RPTDYFAEM(1)AK RPTDYFAEM(52)AK 0 1 0 1 Q6IB29;H7C2Q8;Q99848 Q6IB29 Q6IB29 EBNA1BP2 Probable rRNA-processing protein EBP2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 681.8279 2 672.81627 1343.61799 77135.66 0.60492 0.000407 -0.054407 -3.6606E-05 0.55051 0.00037039 672.816268485721 681.82731348214 85.599 1.0348 85.599 84.945 85.98 0 213 99 4 0 0 0 0.0031825 1 46227 51.998 34.134 1 1.4051 1.6225 0 26810000 7375900 19434000 4823 883 2485 2745 7887 7887 241 RPTETNPVTSNSDEECNETVK 21 1 1 Phospho (STY) _RPTETNPVTSNS(ph)DEECNETVK_ RPTETNPVT(0.001)S(0.012)NS(0.986)DEECNET(0.002)VK RPT(-65.15)ET(-61.04)NPVT(-31.63)S(-19.32)NS(19.32)DEECNET(-26.74)VK 0 0 1 1 A4LAA3;P46100;A0A096LNL9;A0A096LNW1 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 830.0179 3 829.68289 2486.02684 66341.55 0.95639 0.0007935 -0.50429 -0.0004184 0.4521 0.0003751 830.017070494508 835.690517833747 60.595 1.2309 60.595 60.073 61.304 0 429 87 10 0 0 0 1.2977E-19 1 27468 89.434 82.24 6 0.54864 0.65439 0 91633000 55808000 35826000 4824 422 2486 2746 7888 7888 726 RPVSAMFIFSEEK 13 1 1 Oxidation (M),Phospho (STY) _RPVS(ph)AM(ox)FIFSEEK_ RPVSAM(1)FIFSEEK RPVS(1)AMFIFSEEK RPVSAM(55.32)FIFSEEK RPVS(39.3)AMFIFS(-39.3)EEK 0 1 1 1 B4DNQ1;E9PKP7;A8K962;P17480;O00164;B4DLB0 B4DNQ1 B4DNQ1 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 546.5867 3 546.252875 1635.73679 80905.67 0.59254 0.00032367 -0.80479 -0.00043962 -0.21225 -0.00011594 546.252194647061 552.260074001486 106.6 0.55014 106.6 106.3 106.85 7.6294E-06 157 40 6 0 0 0 0.0015932 1 62032 55.322 44.947 2 0.45295 0.52862 0 33512000 20113000 13400000 4825 501 2487 2747 7889 7889 128 861 RPYAPINANAIK 12 1 1 Unmodified _RPYAPINANAIK_ 0 0 0 1 A0A024R534;O94776 A0A024R534 A0A024R534 MTA2 Metastasis-associated protein MTA2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 664.3774 2 664.377686 1326.74082 NaN NaN NaN -0.46839 -0.00031119 NaN NaN NaN NaN 98.785 0.5335 98.785 98.483 99.016 7.6294E-06 0 0 0 0.0039894 1 56171 54.982 32.201 1 NaN NaN 0 4618400 4618400 0 4826 101 2488 2748 7890 7890 RQAEQLSAAGEGGDAGR 17 0 2 Unmodified _RQAEQLSAAGEGGDAGR_ 0 0 0 1 F8WBJ6;B2R823;Q9NRX1 F8WBJ6 F8WBJ6 PNO1 RNA-binding protein PNO1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 564.9438 3 558.271434 1671.79247 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.734 1 65.734 65.234 66.234 0 0 0 0 0.0031812 1 31756 43.164 21.614 1 4827 539 2489 2749 7891 7891 RQAQQERDELADEIANSSGK 20 1 2 Unmodified _RQAQQERDELADEIANSSGK_ 0 0 0 2 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 758.3747 3 749.031631 2244.07306 71319.21 0.84751 0.00063482 -0.43968 -0.00032933 0.40783 0.00030548 749.36548679833 758.374614652041 112.02 0.80107 112.02 111.49 112.29 0 257 68 8 0 0 0 3.8122E-09 1 66347 69.763 60.48 1 1.7471 1.9987 0 31222000 12129000 19094000 4828 49 2490 2750 7892 7892 RQAVDVSPLR 10 0 2 Unmodified _RQAVDVSPLR_ 0 0 0 1 M0R0F0;A0A024R4Q8;M0R0R2;P46782;M0QZN2;Q53G25 M0R0F0 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 571.3289 2 570.827829 1139.64111 82089.16 0.76351 0.00043583 -0.20214 -0.00011539 0.56136 0.00032044 570.827718306845 580.835891942656 94.808 0.70988 94.808 94.31 95.02 -7.6294E-06 133 53 4 0 0 0 0.0044087 1 53114 77.662 38.358 1 1.0395 1.2837 0 30864000 15321000 15543000 4829 91 2491 2751 7893 7893 RQAVDVSPLRR 11 0 3 Unmodified _RQAVDVSPLRR_ 0 0 0 2 M0R0F0;A0A024R4Q8;M0R0R2;P46782;M0QZN2;Q53G25 M0R0F0 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 433.2558 3 432.921349 1295.74222 93894.67 -0.017434 -7.5477E-06 -0.43986 -0.00019042 -0.45729 -0.00019797 432.920662527343 442.929739446492 109.6 0.41303 109.6 109.32 109.73 0 67 29 4 0 0 0 0.0087355 1 64481 38.238 31.349 1 1.1326 1.3248 0 16955000 6725600 10230000 4830 91 2492 2752 7894 7894 RQDISVHK 8 1 1 Unmodified _RQDISVHK_ 0 0 0 1 O00566 O00566 O00566 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 328.1855 3 328.185802 981.535577 104509.4 -0.24894 -8.1698E-05 0.11171 3.666E-05 -0.13723 -4.5038E-05 328.185762392389 334.193312087328 78.066 1.8422 78.066 77.107 78.95 7.6294E-06 542 164 5 0 0 0 0.028959 3 40776 23.793 20.241 1 0.93188 1.1149 0 115560000 55041000 60514000 4831 917 2493 2753 7895;7896;7897 7897 RQDSDLVQCGVTSPSSAEATGK 22 1 1 Phospho (STY) _RQDSDLVQCGVT(ph)SPSSAEATGK_ RQDSDLVQCGVT(0.464)S(0.378)PS(0.122)S(0.033)AEAT(0.003)GK RQDS(-47.37)DLVQCGVT(0.89)S(-0.89)PS(-5.81)S(-11.45)AEAT(-21.46)GK 0 0 1 1 Q9HC52 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 797.6913 3 791.684454 2372.03153 67905.65 0.87107 0.00068961 -0.25975 -0.00020564 0.61132 0.00048397 792.018661172782 797.691889285022 74.38 0.79257 74.38 73.963 74.755 0 441 67 8 0 0 0 1.9128E-09 3 37886 57.351 50.987 6 0.87943 1.0497 0 96896000 51456000 45441000 4832 1210 2494 2754 7898;7899;7900 7898 2414;2987 RQDSDLVQCGVTSPSSAEATGK 22 1 1 Phospho (STY) _RQDSDLVQCGVTS(ph)PSSAEATGK_ RQDS(0.001)DLVQCGVT(0.131)S(0.604)PS(0.131)S(0.131)AEAT(0.002)GK RQDS(-29.57)DLVQCGVT(-6.63)S(6.63)PS(-6.63)S(-6.63)AEAT(-24.86)GK 0 0 1 1 Q9HC52 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1196.0338 2 1187.02304 2372.03153 57233.2 0.1803 0.00021402 0.24816 0.00029457 0.42845 0.00050858 1187.52486786189 1196.03429867057 74.361 0.56801 74.361 74.074 74.642 7.6294E-06 237 48 6 0 0 0 1.026E-06 1 37937 46.319 41.428 6 0.86779 1.0124 0 33169000 16894000 16275000 4833 1210 2494 2754 7901 7901 2414;2987 RQDSDLVQCGVTSPSSAEATGK 22 1 1 Phospho (STY) _RQDSDLVQCGVTS(ph)PSSAEATGK_ RQDSDLVQCGVT(0.166)S(0.806)PS(0.021)S(0.007)AEATGK RQDS(-62.31)DLVQCGVT(-6.87)S(6.87)PS(-15.75)S(-20.8)AEAT(-44.16)GK 0 0 1 1 Q9HC52 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 792.0194 3 791.684454 2372.03153 67558.58 0.99366 0.00078667 -0.17628 -0.00013956 0.81738 0.00064711 792.018801133379 797.69202330029 62.484 1.936 62.484 61.658 63.594 0 1486 181 12 0 0 0 1.1604E-19 2 39074 88.79 81.166 6 1.5842 1.2252 0 285270000 110100000 175170000 4834 1210 2494 2754 7902;7903 7903 2414;2987 RQESQQNSDQNSNLNPHVIR 20 0 2 Unmodified _RQESQQNSDQNSNLNPHVIR_ 0 0 0 1 O14646;B3KT33 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 591.7907 4 591.790438 2363.13265 78929.05 0.87444 0.00051749 0.27827 0.00016468 1.1527 0.00068216 592.04107268594 597.045231174399 92.515 0.61806 92.515 92.246 92.864 0 277 55 8 0 0 0 4.9233E-09 3 51267 66.636 57.353 1 0.68325 0.84776 0 45690000 28372000 17318000 4835 919 2495 2755 7904;7905;7906 7904 RQGYGEGFR 9 0 2 Unmodified _RQGYGEGFR_ 0 0 0 1 H0Y5E8;Q8NG23;Q5SQT9;Q9NR31;Q9H029;Q53F37;B2R679;Q9Y6B6 H0Y5E8 H0Y5E8 SAR1A;DKFZp434B2017;SAR1B GTP-binding protein SAR1a;GTP-binding protein SAR1b ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 545.2702 2 535.262322 1068.51009 NaN NaN NaN 0.38816 0.00020777 NaN NaN NaN NaN 78.898 0.37199 78.898 78.727 79.099 7.6294E-06 0 0 0 0.013012 1 41496 48.283 13.475 1 NaN NaN 0 6312400 0 6312400 4836 851 2496 2756 7907 7907 RQLEEAEEEAQR 12 0 2 Unmodified _RQLEEAEEEAQR_ 0 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 503.2467 3 496.574343 1486.7012 85023.14 0.52601 0.0002612 -0.22008 -0.00010929 0.30593 0.00015192 496.574162545772 503.246369159711 67.654 0.73618 67.654 67.478 68.215 0 321 59 8 0 0 0 8.5975E-111 3 33280 171.26 158.06 1 1.8089 2.2594 0 227090000 79933000 147160000 4837 49 2497 2757 7908;7909;7910 7909 RQLEEAEEEAQR 12 0 2 Unmodified _RQLEEAEEEAQR_ 0 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 754.3679 2 744.357876 1486.7012 70736.06 0.86052 0.00064053 -0.48226 -0.00035898 0.37826 0.00028156 744.357739138933 754.365997643887 67.641 0.88972 67.641 67.334 68.224 0 265 74 7 0 0 0 1.1485E-13 2 33274 117.23 83.918 1 1.6715 2.0812 0 106260000 41350000 64909000 4838 49 2497 2757 7911;7912 7911 RQLEEAEEEAQR 12 0 2 Unmodified _RQLEEAEEEAQR_ 0 0 0 1 A0A024R1N1;P35579;A0A0U4BW16;Q6ZNL4 A0A024R1N1 A0A024R1N1 MYH9;FLJ00279 Myosin-9 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 503.247 3 496.574343 1486.7012 NaN NaN NaN -1.3391 -0.00066496 NaN NaN NaN NaN 20.107 0.43812 20.107 19.821 20.259 0 0 0 0 0.013913 1 7103 36.981 17.923 1 NaN NaN 0 4987800 0 4987800 4839 49 2497 2757 7913 7913 RQNGDDPLLTYR 12 0 2 Unmodified _RQNGDDPLLTYR_ 0 0 0 1 P02545;W8QEH3;Q5TCI8;A0A0C4DGC5;B4DFR3 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 489.9205 3 483.24779 1446.72154 86678.37 0.52636 0.00025436 -0.58228 -0.00028138 -0.055918 -2.7022E-05 483.24744549461 489.919857951706 108.26 0.74474 108.26 107.87 108.61 0 133 57 5 0 0 0 0.00011794 2 63330 85.554 71.648 1 1.1178 1.3643 0 21352000 9898400 11453000 4840 954 2498 2758 7914;7915 7914 RQNGDDPLLTYR 12 0 2 Unmodified _RQNGDDPLLTYR_ 0 0 0 1 P02545;W8QEH3;Q5TCI8;A0A0C4DGC5;B4DFR3 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 724.3672 2 724.368047 1446.72154 71592.55 1.0785 0.00078126 -0.14402 -0.00010433 0.93452 0.00067693 724.36863515104 734.375861162933 108.19 0.43053 108.19 107.97 108.4 0 102 32 4 0 0 0 0.025868 1 63315 26.673 12.903 1 1.1843 1.4407 0 19303000 9624100 9678800 4841 954 2498 2758 7916 7916 RQPQEEVVHEDQGK 14 1 1 Unmodified _RQPQEEVVHEDQGK_ 0 0 0 1 E9PMS6;B7Z8W3;A0A1P7ZIM8;A0A0A0MTE2;E9PMT2;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMP7;H0Y424;H0YDQ3 E9PMS6 E9PMS6 LMO7 LIM domain only protein 7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 566.2838 3 560.276297 1677.80706 81221.02 0.7803 0.00043718 -0.15667 -8.7781E-05 0.62362 0.0003494 560.27666804204 566.283579953017 75.884 1.0925 75.884 75.335 76.427 0 356 93 6 0 0 0 9.794E-26 3 39214 129.01 116.95 1 2.1258 2.5161 0 50794000 13495000 37300000 4842 391 2499 2759 7917;7918;7919 7919 RQPQEEVVHEDQGK 14 1 1 Unmodified _RQPQEEVVHEDQGK_ 0 0 0 1 E9PMS6;B7Z8W3;A0A1P7ZIM8;A0A0A0MTE2;E9PMT2;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMP7;H0Y424;H0YDQ3 E9PMS6 E9PMS6 LMO7 LIM domain only protein 7 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 566.6179 3 560.276297 1677.80706 NaN NaN NaN -0.096752 -5.4208E-05 NaN NaN NaN NaN 75.094 0.54374 75.094 74.663 75.207 0 0 0 0 0.00020046 1 38599 63.128 46.99 1 NaN NaN 0 14752000 0 14752000 4843 391 2499 2759 7920 7920 RQPQEEVVHEDQGK 14 1 1 Unmodified _RQPQEEVVHEDQGK_ 0 0 0 1 E9PMS6;B7Z8W3;A0A1P7ZIM8;A0A0A0MTE2;E9PMT2;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMP7;H0Y424;H0YDQ3 E9PMS6 E9PMS6 LMO7 LIM domain only protein 7 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 566.2852 3 560.276297 1677.80706 NaN NaN NaN 0.47935 0.00026857 NaN NaN NaN NaN 16.504 0.2202 16.504 16.392 16.612 -1.9073E-06 0 0 0 0.0030033 1 3868 42.947 31.029 1 NaN NaN 0 2223200 0 2223200 4844 391 2499 2759 7921 7921 RQQQEEEDLNLEDRGEETVLGGGTR 25 0 3 Unmodified _RQQQEEEDLNLEDRGEETVLGGGTR_ 0 0 0 2 A8KAG1;Q5T3I0 A8KAG1 A8KAG1 GPATCH4 G patch domain-containing protein 4 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 715.5953 4 715.343231 2857.34382 NaN NaN NaN -0.39593 -0.00028322 NaN NaN NaN NaN 120.59 0.22086 120.59 120.41 120.63 0 0 0 0 0.018182 1 72657 18.56 11.027 1 NaN NaN 0 2785000 2785000 0 4845 509 2500 2760 7922 7922 RQSEDECFR 9 0 2 Unmodified _RQSEDECFR_ 0 0 0 1 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 613.7655 2 613.764568 1225.51458 78660.73 0.42465 0.00026064 -0.022327 -1.3703E-05 0.40232 0.00024693 613.764601766949 623.772718244785 69.251 0.31796 69.251 69.065 69.383 0 112 30 5 0 0 0 0.00017548 2 34399 96.331 72.903 1 0.78892 0.97076 0 27572000 14149000 13422000 4846 953 2501 2761 7923;7924 7923 RQSLELQK 8 1 1 Unmodified _RQSLELQK_ 0 0 0 1 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 510.3015 2 501.290548 1000.56654 NaN NaN NaN -0.23585 -0.00011823 NaN NaN NaN NaN 77.55 0.59276 77.55 77.263 77.855 0 0 0 0 0.014976 1 40443 49.833 5.4384 1 NaN NaN 0 16252000 0 16252000 4847 1232 2502 2762 7925 7925 RQSPSPSTRPIR 12 0 3 Phospho (STY) _RQS(ph)PSPSTRPIR_ RQS(0.967)PS(0.033)PSTRPIR RQS(14.66)PS(-14.66)PS(-36.64)T(-36.64)RPIR 0 0 1 2 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3;E9PCT1 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 487.9158 3 487.915585 1460.72492 84831.3 0.52869 0.00025796 -0.38161 -0.00018619 0.14708 7.1764E-05 487.915437682785 497.923847390336 17.563 0.34907 17.563 17.398 17.747 0 74 13 10 0 0 0 0.0029794 1 4765 49.482 40.883 4 0.26937 0.30973 0 96441000 74510000 21931000 4848 353 2503 2763 7926 7926 555 RQTTFESQDR 10 0 2 Unmodified _RQTTFESQDR_ 0 0 0 1 A0A024R250;Q76FK4;B4DM91;F8WE42;Q6AI50;F5H101 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 634.3051 2 634.304915 1266.59528 NaN NaN NaN 0.29457 0.00018685 NaN NaN NaN NaN 66.072 0.19814 66.072 65.967 66.165 0 0 0 0 0.026105 1 32038 43.282 12.208 1 NaN NaN 0 9593300 9593300 0 4849 59 2504 2764 7927 7927 RQVDQLTNDK 10 1 1 Unmodified _RQVDQLTNDK_ 0 0 0 1 V9HWE1;Q53HU8;P08670;B3KRK8;B0YJC4;A0A1B0GUA0 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 617.829 2 608.817658 1215.62076 77461.15 0.45987 0.00027997 -0.10453 -6.3639E-05 0.35534 0.00021634 608.817700982022 617.828708273658 66.944 0.23487 66.944 66.84 67.075 0 67 16 5 0 0 0 8.5853E-30 1 32810 161.51 161.51 1 1.3275 1.5715 0 51378000 22780000 28597000 4850 960 2505 2765 7928 7928 RQVSIEEGERK 11 1 2 Unmodified _RQVSIEEGERK_ 0 0 0 2 B7Z5Z9;Q6FGX3;Q53ET8;A0A024R5J5;A0A024R5H8;Q53S08;P20340 B7Z5Z9 B7Z5Z9 RAB6A;RAB6C Ras-related protein Rab-6A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 453.5841 3 444.240635 1329.70008 93634.61 0.27525 0.00012228 -0.11793 -5.2389E-05 0.15732 6.9887E-05 444.240567276704 453.583932689982 80.655 0.80702 80.655 80.261 81.068 0 187 74 4 0 0 0 0.0098998 1 42700 36.32 31.322 1 1.6482 1.8872 0 32837000 14686000 18151000 4851 108 2506 2766 7929 7929 RQYELLK 7 1 1 Unmodified _RQYELLK_ 0 0 0 1 Q59HG1;O95239;Q2VIQ3;Q6PKB2 Q59HG1 Q59HG1 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 475.2777 2 475.276909 948.539266 87245.45 1.0133 0.00048162 -0.072399 -3.4409E-05 0.94094 0.00044721 475.276690597091 484.288124544365 102.32 1.5444 102.32 101.42 102.97 0 412 122 4 0 0 0 0.024466 1 58854 97.071 42.546 1 0.94302 1.1164 0 51540000 27174000 24366000 4852 944 2507 2767 7930 7930 RRDEQLSPEEEEK 13 1 2 Phospho (STY) _RRDEQLS(ph)PEEEEK_ RRDEQLS(1)PEEEEK RRDEQLS(54.97)PEEEEK 0 0 1 2 C9JCN8;P15408 C9JCN8 C9JCN8 FOSL2 Fos-related antigen 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 575.5882 3 575.587751 1723.74142 79357.3 0.41025 0.00023613 -0.23506 -0.0001353 0.17519 0.00010084 575.922004525739 584.93113320082 73.353 1.1481 73.353 72.465 73.613 0 220 96 4 0 0 0 0.0015482 1 37194 54.974 54.974 1 0.79806 0.91956 0 46879000 24373000 22506000 4853 739 2508 2768 7931 7931 1245 RRDEQLSPEEEEK 13 1 2 Phospho (STY) _RRDEQLS(ph)PEEEEK_ RRDEQLS(1)PEEEEK RRDEQLS(76.15)PEEEEK 0 0 1 2 C9JCN8;P15408 C9JCN8 C9JCN8 FOSL2 Fos-related antigen 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 575.5883 3 575.587751 1723.74142 78307.2 0.44177 0.00025428 0.23495 0.00013523 0.67672 0.00038951 575.588167999112 584.931408266714 19.109 0.47905 19.109 18.906 19.385 0 74 16 7 0 0 0 0.00017337 1 6073 76.151 76.151 1 1.0491 0.9141 0 206270000 103540000 102730000 4854 739 2508 2768 7932 7932 1245 RRDEQLSPEEEEK 13 1 2 Phospho (STY) _RRDEQLS(ph)PEEEEK_ RRDEQLS(1)PEEEEK RRDEQLS(42.31)PEEEEK 0 0 1 2 C9JCN8;P15408 C9JCN8 C9JCN8 FOSL2 Fos-related antigen 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 876.8947 2 862.877988 1723.74142 64342.71 0.74654 0.00064417 0.059324 5.119E-05 0.80586 0.00069536 862.877869874365 876.893439172681 19.108 0.30534 19.108 18.982 19.287 0 68 11 9 0 0 0 0.0035859 1 6081 42.314 42.314 1 0.92381 0.84354 0 59302000 31165000 28137000 4855 739 2508 2768 7933 7933 1245 RREEGPPPPSPDGASSDAEPEPPSGR 26 0 3 3 Phospho (STY) _RREEGPPPPS(ph)PDGAS(ph)S(ph)DAEPEPPSGR_ RREEGPPPPS(1)PDGAS(0.998)S(0.998)DAEPEPPS(0.005)GR RREEGPPPPS(37.7)PDGAS(26.07)S(26.72)DAEPEPPS(-26.07)GR 0 0 3 2 Q9NTJ3;E9PD53;B3KXX5;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JWF0;C9IYK2;C9JJ64;F8WCB7 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 981.3923 3 971.049273 2910.12599 61261.89 0.44307 0.00043024 0.093097 9.0402E-05 0.53617 0.00052065 971.383647312072 981.05770061076 67.794 1.8242 67.794 67.221 69.045 0 1119 165 10 0 0 0 1.901E-17 1 33467 64.221 50.58 4 0.75591 0.86981 0 248920000 146800000 102120000 4856 1220 2509 2769 7934 7934 2469;2470;2471;2472 RREEGPPPPSPDGASSDAEPEPPSGR 26 0 3 2 Phospho (STY) _RREEGPPPPS(ph)PDGAS(ph)SDAEPEPPSGR_ RREEGPPPPS(0.997)PDGAS(0.522)S(0.481)DAEPEPPSGR RREEGPPPPS(22.82)PDGAS(0.36)S(-0.36)DAEPEPPS(-32.14)GR 0 0 2 2 Q9NTJ3;E9PD53;B3KXX5;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JWF0;C9IYK2;C9JJ64;F8WCB7 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 944.7288 3 944.39383 2830.15966 61750.15 0.52845 0.00049906 -0.17609 -0.0001663 0.35236 0.00033276 944.727963155336 954.736362551628 73.829 1.7207 73.829 73.025 74.746 0 1351 148 12 0 0 0 1.3217E-13 2 37788 61.941 56.675 6 0.54392 0.62289 0 545220000 344170000 201050000 4857 1220 2509 2770 7935;7936 7935 2469;2470;2471;2472 RREEGPPPPSPDGASSDAEPEPPSGR 26 0 3 2 Phospho (STY) _RREEGPPPPS(ph)PDGASSDAEPEPPS(ph)GR_ RREEGPPPPS(0.997)PDGAS(0.004)S(0.006)DAEPEPPS(0.993)GR RREEGPPPPS(24.86)PDGAS(-24.86)S(-22.07)DAEPEPPS(22.07)GR 0 0 2 2 Q9NTJ3;E9PD53;B3KXX5;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JWF0;C9IYK2;C9JJ64;F8WCB7 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 716.3027 4 708.547192 2830.15966 70923.23 1.1713 0.00082993 -0.038602 -2.7352E-05 1.1327 0.00080258 708.797707374682 716.304192688146 51.111 2.0978 51.111 50.105 52.203 0 1327 189 11 0 0 0 2.2522E-23 1 30354 81.82 72.023 6 1.3777 1.5842 0 77200000 30249000 46951000 4858 1220 2509 2770 7937 7937 2469;2470;2471;2472 RREEGPPPPSPDGASSDAEPEPPSGR 26 0 3 2 Phospho (STY) _RREEGPPPPS(ph)PDGAS(ph)SDAEPEPPSGR_ RREEGPPPPS(1)PDGAS(0.519)S(0.48)DAEPEPPS(0.001)GR RREEGPPPPS(34.26)PDGAS(0.34)S(-0.34)DAEPEPPS(-25.79)GR 0 0 2 2 Q9NTJ3;E9PD53;B3KXX5;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JWF0;C9IYK2;C9JJ64;F8WCB7 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 954.403 3 944.39383 2830.15966 61982.2 0.97403 0.00091987 0.11136 0.00010517 1.0854 0.001025 944.728315553345 954.736414037501 51.13 3.2399 51.13 49.515 52.755 0 2828 299 13 0 0 0 3.4192E-09 1 31599 46.696 40.203 6 1.1756 1.3518 0 626280000 256090000 370190000 4859 1220 2509 2770 7938 7938 2469;2470;2471;2472 RREEGPPPPSPDGASSDAEPEPPSGR 26 0 3 Phospho (STY) _RREEGPPPPS(ph)PDGASSDAEPEPPSGR_ RREEGPPPPS(0.992)PDGAS(0.006)S(0.002)DAEPEPPSGR RREEGPPPPS(22.1)PDGAS(-22.1)S(-26.47)DAEPEPPS(-72.85)GR 0 0 1 2 Q9NTJ3;E9PD53;B3KXX5;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JWF0;C9IYK2;C9JJ64;F8WCB7 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 696.063 4 688.555609 2750.19333 71958.6 0.77192 0.00053151 -0.1141 -7.8565E-05 0.65782 0.00045294 688.80640282422 696.312313758116 79.632 1.4124 79.632 79.099 80.511 0 1053 129 12 0 0 0 8.7652E-22 3 42395 75.625 66.324 4 0.84082 0.96569 0 338990000 178410000 160580000 4860 1220 2509 2771 7939;7940;7941 7941 2469;2470;2471;2472 RREEGPPPPSPDGASSDAEPEPPSGR 26 0 3 Phospho (STY) _RREEGPPPPS(ph)PDGASSDAEPEPPSGR_ RREEGPPPPS(0.999)PDGASSDAEPEPPSGR RREEGPPPPS(33.14)PDGAS(-33.14)S(-33.14)DAEPEPPS(-60.2)GR 0 0 1 2 Q9NTJ3;E9PD53;B3KXX5;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JWF0;C9IYK2;C9JJ64;F8WCB7 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 927.7474 3 917.738386 2750.19333 63006.06 0.58561 0.00053744 0.10046 9.22E-05 0.68607 0.00062964 918.072902592827 928.081006647647 79.68 1.4477 79.68 79.063 80.511 0 1109 132 11 0 0 0 1.0527E-21 4 41912 74.28 67.985 4 0.83801 0.96087 0 445130000 237980000 207150000 4861 1220 2509 2771 7942;7943;7944;7945 7943 2469;2470;2471;2472 RREEGPPPPSPDGASSDAEPEPPSGR 26 0 3 Phospho (STY) _RREEGPPPPS(ph)PDGASSDAEPEPPSGR_ RREEGPPPPS(0.982)PDGAS(0.009)S(0.009)DAEPEPPSGR RREEGPPPPS(20.5)PDGAS(-20.5)S(-20.5)DAEPEPPS(-55.16)GR 0 0 1 2 Q9NTJ3;E9PD53;B3KXX5;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JWF0;C9IYK2;C9JJ64;F8WCB7 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 696.3142 4 688.555609 2750.19333 71703.23 0.96757 0.00066623 0.24077 0.00016578 1.2083 0.00083201 688.806568802592 696.312662556162 49.935 2.6826 49.935 48.524 51.206 0 2004 253 11 0 0 0 6.3687E-13 1 29440 56.252 46.765 4 1.8833 2.1655 0 398780000 142480000 256310000 4862 1220 2509 2771 7946 7946 2469;2470;2471;2472 RREEGPPPPSPDGASSDAEPEPPSGR 26 0 3 Unmodified _RREEGPPPPSPDGASSDAEPEPPSGR_ 0 0 0 2 Q9NTJ3;E9PD53;B3KXX5;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JWF0;C9IYK2;C9JJ64;F8WCB7 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 676.0703 4 668.564026 2670.227 73263.39 0.6455 0.00043156 -0.66388 -0.00044385 -0.018378 -1.2287E-05 668.813620981799 676.320926243735 91.779 1.1729 91.779 91.276 92.449 0 511 101 8 0 0 0 2.4158E-13 3 50901 59.691 49.269 1 0.82085 0.9518 0 70850000 40511000 30340000 4863 1220 2509 2772 7947;7948;7949 7948 RRPENPKPQDGK 12 2 2 Unmodified _RRPENPKPQDGK_ 0 0 0 3 Q7KZ24;H0Y449;P67809;A0JLU4;Q2VIK8 Q7KZ24 Q7KZ24 YBX1 Nuclease-sensitive element-binding protein 1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 365.2064 4 356.195654 1420.75351 NaN NaN NaN -0.043295 -1.5422E-05 NaN NaN NaN NaN 67.196 0.44645 67.196 66.84 67.286 0 0 0 0 0.033942 1 32778 21.759 11.707 1 NaN NaN 0 21395000 0 21395000 4864 847 2510 2773 7950 7950 RRSPPADAIPK 11 1 2 Phospho (STY) _RRS(ph)PPADAIPK_ RRS(1)PPADAIPK RRS(60.55)PPADAIPK 0 0 1 2 M0R1Q8;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4;C9JW69;Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754 M0R1Q8 M0R1Q8 RCC1 Regulator of chromosome condensation MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 439.2341 3 429.890488 1286.64963 89754.38 0.1418 6.0957E-05 -0.44176 -0.00018991 -0.29996 -0.00012895 429.890406706108 439.234188603383 80.66 1.3255 80.66 80.197 81.523 0 780 123 9 0 0 0 0.0024017 1 42823 60.549 35.619 1 0.68655 0.81727 0 296050000 168710000 127340000 4865 346 2511 2774 7951 7951 544 RRSPPADAIPK 11 1 2 Phospho (STY) _RRS(ph)PPADAIPK_ RRS(1)PPADAIPK RRS(45.28)PPADAIPK 0 0 1 2 M0R1Q8;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4;C9JW69;Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754 M0R1Q8 M0R1Q8 RCC1 Regulator of chromosome condensation MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 644.3326 2 644.332094 1286.64963 74195.93 0.4016 0.00025876 0.61267 0.00039477 1.0143 0.00065353 644.332510446536 658.347916611598 23.228 2.1858 23.228 22.716 24.902 0 547 120 10 0 0 0 0.0059209 1 9560 45.28 28.747 1 0.87665 0.74411 0 414200000 219690000 194510000 4866 346 2511 2774 7952 7952 544 RRSPSPTPTPGPSR 14 0 3 Phospho (STY) _RRS(ph)PSPTPTPGPSR_ RRS(1)PSPTPTPGPSR RRS(36.09)PS(-36.09)PT(-68.36)PT(-90.18)PGPS(-123.35)R 0 0 1 2 F8WD88;P49450 F8WD88 F8WD88 CENPA Histone H3-like centromeric protein A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 524.9266 3 524.926261 1571.75695 82541.46 0.81268 0.00042659 0.54565 0.00028643 1.3583 0.00071302 524.926721074314 534.934807261618 17.168 0.53394 17.168 17.023 17.557 0 78 18 10 0 0 0 2.7917E-24 1 4399 127.61 127.61 5 0.98229 1.1295 0 218680000 106970000 111710000 4867 836 2512 2775 7953 7953 1442 RRSPSPTPTPGPSR 14 0 3 Phospho (STY) _RRS(ph)PSPTPTPGPSR_ RRS(0.886)PS(0.057)PT(0.023)PT(0.032)PGPS(0.001)R RRS(11.9)PS(-11.9)PT(-15.81)PT(-14.4)PGPS(-29.59)R 0 0 1 2 F8WD88;P49450 F8WD88 F8WD88 CENPA Histone H3-like centromeric protein A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 786.886 2 786.885753 1571.75695 67300.54 1.0693 0.00084144 0.64205 0.00050522 1.7114 0.0013467 786.886258182051 801.898548773018 17.142 0.27517 17.142 17.023 17.298 0 47 8 9 0 0 0 0.0011576 1 4403 54.143 54.143 5 1.0101 1.1615 0 57082000 25988000 31095000 4868 836 2512 2775 7954 7954 1442 RRSPSPYYSR 10 0 3 2 Phospho (STY) _RRS(ph)PS(ph)PYYSR_ RRS(1)PS(0.993)PY(0.007)YSR RRS(51.16)PS(21.42)PY(-21.42)Y(-44.59)S(-38.58)R 0 0 2 2 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995;H7BXF3;Q549U1;Q13595 Q8N1H4;Q549U1 Q549U1 DKFZp686F18120;TRA2B;HSU53209;TRA2A Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 476.8681 3 476.865553 1427.57483 87054.97 0.30331 0.00014464 -0.079851 -3.8078E-05 0.22345 0.00010656 476.865589113555 486.873800499439 59.244 2.0452 59.244 58.629 60.674 0 940 155 10 0 0 0 0.00016477 1 26795 86.214 74.156 10 1.1084 1.2692 0 559160000 257720000 301440000 4869 1052;556 2513 2776 7955 7955 920;921 RRTFSLTEVR 10 0 3 2 Phospho (STY) _RRT(ph)FS(ph)LTEVR_ RRT(0.999)FS(0.994)LT(0.008)EVR RRT(29.16)FS(21.95)LT(-21.95)EVR 0 0 2 2 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 485.562 3 475.553086 1423.63743 87028.68 0.59481 0.00028286 0.16658 7.9217E-05 0.76139 0.00036208 475.553094909038 485.561469151599 93.995 0.99361 93.995 93.719 94.712 0 263 80 4 0 0 0 0.0063784 1 52425 45.79 33.213 3 0.94567 1.0996 0 44665000 21401000 23265000 4870 944 2514 2777 7956 7956 1633;2860 RSCTLPNYTK 10 1 1 Phospho (STY) _RSCT(ph)LPNYTK_ RS(0.393)CT(0.607)LPNYTK RS(-1.89)CT(1.89)LPNY(-43.75)T(-45.45)K 0 0 1 1 A6NHR9;J3KTL8 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 669.3066 2 660.29432 1318.57409 73289.8 1.1218 0.00074073 0.02411 1.592E-05 1.1459 0.00075665 660.294253151289 669.30552654575 34.569 0.52237 34.569 34.332 34.854 0 146 39 6 0 0 0 0.021497 1 19146 48.948 40.352 4 1.7124 1.3089 0 17135000 5807200 11328000 4871 429 2515 2778 7957 7957 2727 RSEKPPAGSICR 12 1 2 Unmodified _RSEKPPAGSICR_ 0 0 0 2 Q96J73;B4DZM3;Q53FR7;Q6PJJ2;P56182 Q96J73 Q96J73 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 453.2382 3 453.238349 1356.69322 87375.67 0.14579 6.6079E-05 -0.3116 -0.00014123 -0.1658 -7.5148E-05 453.238309275402 462.581803765618 82.844 1.0582 82.844 82.092 83.15 0 480 101 6 0 0 0 0.0022113 2 44184 63.185 48.394 1 0.80584 0.94589 0 133760000 70557000 63199000 4872 674 2516 2779 7958;7959 7959 RSELSQDAEPAGSQETK 17 1 1 Phospho (STY) _RSELSQDAEPAGS(ph)QETK_ RSELSQDAEPAGS(0.857)QET(0.143)K RS(-50.69)ELS(-43.74)QDAEPAGS(7.79)QET(-7.79)K 0 0 1 1 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 638.2819 3 638.280986 1911.82113 75674.53 0.69552 0.00044393 -0.061095 -3.8996E-05 0.63442 0.00040494 638.615297847678 644.28859816201 57.686 0.95237 57.686 57.241 58.194 -3.8147E-06 430 77 8 0 0 0 1.6518E-05 1 25184 56.684 48.496 4 0.28055 0.33458 0 90498000 66103000 24394000 4873 1199 2517 2780 7960 7960 2385 RSELSQDAEPAGSQETK 17 1 1 Phospho (STY) _RSELSQDAEPAGS(ph)QETK_ RSELSQDAEPAGS(0.575)QET(0.425)K RS(-53.59)ELS(-50.77)QDAEPAGS(1.31)QET(-1.31)K 0 0 1 1 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 638.281 3 638.280986 1911.82113 76474.55 0.84709 0.00054068 -0.27252 -0.00017394 0.57457 0.00036674 638.280808894228 644.288471283483 19.282 0.54926 19.282 19.048 19.597 0 56 23 5 0 0 0 1.761E-05 1 6296 54.668 44.183 4 0.51271 0.39175 0 17524000 11636000 5887900 4874 1199 2517 2780 7961 7961 2385 RSELSQDAEPAGSQETK 17 1 1 Phospho (STY) _RSELSQDAEPAGS(ph)QETK_ RSELSQDAEPAGS(1)QETK RS(-87.02)ELS(-82.9)QDAEPAGS(41.6)QET(-41.6)K 0 0 1 1 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 956.9194 2 956.917841 1911.82113 61708.1 0.53835 0.00051516 0.82153 0.00078613 1.3599 0.0013013 956.918170933321 965.929281659289 24.955 0.675 24.955 24.727 25.402 0 206 33 11 0 0 0 1.2159E-22 2 11137 112.58 99.75 4 0.617 0.47714 0 280820000 174200000 106620000 4875 1199 2517 2780 7962;7963 7962 2385 RSELSQDAEPAGSQETK 17 1 1 Phospho (STY) _RSELSQDAEPAGS(ph)QETK_ RSELSQDAEPAGS(0.881)QET(0.119)K RS(-66.94)ELS(-62.31)QDAEPAGS(8.7)QET(-8.7)K 0 0 1 1 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 638.6165 3 638.280986 1911.82113 75109.7 0.87701 0.00055978 -0.069616 -4.4435E-05 0.8074 0.00051535 638.281020008766 644.28842948434 24.935 0.6142 24.935 24.727 25.341 0 211 30 11 0 0 0 4.4254E-07 1 11138 72.99 64.901 4 0.61855 0.47823 0 244960000 153000000 91963000 4876 1199 2517 2780 7964 7964 2385 RSELSQDAEPAGSQETK 17 1 1 Unmodified _RSELSQDAEPAGSQETK_ 0 0 0 1 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 617.9681 3 611.625543 1831.8548 77099.03 0.49397 0.00030212 0.096133 5.8797E-05 0.5901 0.00036092 611.625537449448 617.633161588972 65.571 0.38486 65.571 65.404 65.789 0 184 28 9 0 0 0 2.0156E-12 3 31544 93.39 90.379 1 1.0936 1.3098 0 126360000 63050000 63306000 4877 1199 2517 2781 7965;7966;7967 7967 RSELSQDAEPAGSQETK 17 1 1 Unmodified _RSELSQDAEPAGSQETK_ 0 0 0 1 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 611.6255 3 611.625543 1831.8548 78735.8 0.58896 0.00036022 1.2969 0.0007932 1.8858 0.0011534 611.625942224258 617.633928323765 20.254 0.29336 20.254 20.112 20.405 1.9073E-06 75 15 7 0 0 0 0.00056085 1 7160 36.816 36.816 1 1.5749 1.2776 0 9347200 3536300 5810900 4878 1199 2517 2781 7968 7968 RSLATMDSPPHQK 13 1 1 Oxidation (M),Phospho (STY) _RSLATM(ox)DS(ph)PPHQK_ RSLATM(1)DSPPHQK RSLAT(0.004)MDS(0.996)PPHQK RSLATM(68.58)DSPPHQK RS(-34.09)LAT(-23.84)MDS(23.84)PPHQK 0 1 1 1 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 521.9046 3 521.904357 1562.69124 84276.37 0.34479 0.00017995 0.34545 0.00018029 0.69024 0.00036024 521.904499406395 527.911914768419 61.928 0.22957 61.928 61.807 62.036 0 67 13 7 0 0 0 0.00073865 2 28707 68.576 53.677 3 0.76786 0.90872 0 50184000 25910000 24273000 4879 1059 2518 2782 7969;7970 7969 303 1980 RSLDPLGSEEEAEASEDDSLHLLGGGGRDSEEEMLA 36 0 2 Oxidation (M),Phospho (STY) _RSLDPLGSEEEAEAS(ph)EDDSLHLLGGGGRDSEEEM(ox)LA_ RSLDPLGSEEEAEASEDDSLHLLGGGGRDSEEEM(1)LA RSLDPLGSEEEAEAS(0.35)EDDS(0.35)LHLLGGGGRDS(0.301)EEEMLA RSLDPLGSEEEAEASEDDSLHLLGGGGRDSEEEM(68.48)LA RS(-62.85)LDPLGS(-50.1)EEEAEAS(0)EDDS(0)LHLLGGGGRDS(-0.65)EEEMLA 0 1 1 2 A0A0B4J2E5;Q15269 A0A0B4J2E5 A0A0B4J2E5 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 975.4233 4 974.92175 3895.65789 61234.95 0.99556 0.0009706 -0.15386 -0.00015 0.8417 0.0008206 975.172244092324 980.176608776541 133.52 0.15761 133.52 133.41 133.57 0 53 6 14 0 0 0 1.861E-27 1 81321 68.481 64.037 5 1.5904 1.9782 0 83492000 32486000 51006000 4880 313 2519 2783 7971 7971 75 493;494;495;496 RSLDPLGSEEEAEASEDDSLHLLGGGGRDSEEEMLA 36 0 2 Oxidation (M),Phospho (STY) _RSLDPLGSEEEAEAS(ph)EDDSLHLLGGGGRDSEEEM(ox)LA_ RSLDPLGSEEEAEASEDDSLHLLGGGGRDSEEEM(1)LA RSLDPLGSEEEAEAS(0.333)EDDS(0.333)LHLLGGGGRDS(0.333)EEEMLA RSLDPLGSEEEAEASEDDSLHLLGGGGRDSEEEM(41.59)LA RS(-40.25)LDPLGS(-33.23)EEEAEAS(0)EDDS(0)LHLLGGGGRDS(0)EEEMLA 0 1 1 2 A0A0B4J2E5;Q15269 A0A0B4J2E5 A0A0B4J2E5 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 980.4265 4 974.92175 3895.65789 61076.07 0.49557 0.00048314 0.78056 0.00076099 1.2761 0.0012441 975.173362146284 980.177619159944 145.72 0.33128 145.72 145.54 145.87 0 127 13 15 0 0 0 3.1752E-08 1 84007 41.591 41.591 5 1.5391 1.9077 0 35638000 13345000 22293000 4881 313 2519 2783 7972 7972 75 493;494;495;496 RSLHSVSEER 10 0 2 Unmodified _RSLHSVSEER_ 0 0 0 1 Q8WYP5;B3KRD0;H7C4S1 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 407.2146 3 400.542426 1198.60545 93656.27 -0.51672 -0.00020697 0.58151 0.00023292 0.064787 2.595E-05 400.542769758503 407.214828589341 83.204 0.75842 83.204 82.873 83.631 7.6294E-06 256 67 8 0 0 0 0.0018501 2 44517 66.262 56.83 1 1.1082 1.3817 0 147380000 70717000 76664000 4882 1170 2520 2784 7973;7974 7973 RSMQQLDPSPARK 13 1 2 Oxidation (M),Phospho (STY) _RSM(ox)QQLDPS(ph)PARK_ RSM(1)QQLDPSPARK RSMQQLDPS(1)PARK RSM(42.58)QQLDPSPARK RS(-41.04)MQQLDPS(41.04)PARK 0 1 1 2 A8K3X3;Q9H410;Q4G1A1;Q5JW54 A8K3X3 A8K3X3 DSN1 Kinetochore-associated protein DSN1 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 537.2557 3 537.25539 1608.74434 82117.56 0.5587 0.00030017 -0.2192 -0.00011777 0.3395 0.0001824 537.255414253383 546.598963683784 64.16 0.63716 64.16 63.678 64.315 0 175 44 7 0 0 0 0.0029726 1 30449 42.58 21.843 2 0.79141 0.92292 0 92551000 57621000 34930000 4883 455 2521 2785 7975 7975 119 790 RSMQQLDPSPARK 13 1 2 Oxidation (M),Phospho (STY) _RSM(ox)QQLDPS(ph)PARK_ RSM(1)QQLDPSPARK RS(0.01)MQQLDPS(0.99)PARK RSM(48.63)QQLDPSPARK RS(-19.99)MQQLDPS(19.99)PARK 0 1 1 2 A8K3X3;Q9H410;Q4G1A1;Q5JW54 A8K3X3 A8K3X3 DSN1 Kinetochore-associated protein DSN1 homolog MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 805.3797 2 805.379446 1608.74434 66253.66 1.0518 0.00084708 0.04175 3.3624E-05 1.0935 0.00088071 805.379539068413 819.395046118165 17.142 0.32339 17.142 16.946 17.269 0 52 10 9 0 0 0 0.0016617 1 4398 48.625 13.102 2 0.75152 0.68744 0 56566000 31328000 25238000 4884 455 2521 2785 7976 7976 119 790 RSPALHGTPTAGCGSR 16 0 2 Phospho (STY) _RS(ph)PALHGTPTAGCGSR_ RS(0.999)PALHGT(0.001)PTAGCGSR RS(32.34)PALHGT(-32.34)PT(-51.38)AGCGS(-53.15)R 0 0 1 1 Q8IY92 Q8IY92 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 568.9271 3 568.926044 1703.7563 78816.8 0.29936 0.00017031 0.88554 0.00050381 1.1849 0.00067412 569.260779322682 575.598672467457 19.569 0.43281 19.569 19.405 19.838 0 99 20 9 0 0 0 3.39E-05 1 6524 54.974 44.874 4 2.3332 2.0173 0 27761000 7557400 20204000 4885 1148 2522 2786 7977 7977 2204 RSPERPTGDLR 11 0 3 Phospho (STY) _RS(ph)PERPTGDLR_ RS(0.997)PERPT(0.003)GDLR RS(25.49)PERPT(-25.49)GDLR 0 0 1 2 Q5T200;Q6PJ96;Q5T9K0 Q5T200 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 455.2213 3 455.220785 1362.64053 87414.76 0.24068 0.00010956 -0.18227 -8.2974E-05 0.058408 2.6588E-05 455.220658250204 465.228942682982 18.308 0.32133 18.308 18.129 18.451 0 79 14 7 0 0 0 0.0049794 1 5374 43.592 43.592 2 0.32369 0.3722 0 37546000 28625000 8921500 4886 1102 2523 2787 7978 7978 2086 RSPPAPGLQPMR 12 0 2 Oxidation (M),Phospho (STY) _RS(ph)PPAPGLQPM(ox)R_ RSPPAPGLQPM(1)R RS(1)PPAPGLQPMR RSPPAPGLQPM(46.16)R RS(46.16)PPAPGLQPMR 0 1 1 1 C9JCN8;P15408 C9JCN8 C9JCN8 FOSL2 Fos-related antigen 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 468.5613 3 468.226883 1401.65882 87142.02 0.63879 0.0002991 -0.47359 -0.00022175 0.1652 7.7351E-05 468.226706470683 474.898866839199 33.245 0.97977 33.245 32.795 33.774 0 280 74 5 0 0 0 0.0034237 1 17949 46.156 36.834 1 0.65464 0.56602 0 27771000 16891000 10880000 4887 739 2524 2788 7979 7979 194 1246 RSPQQTVPYVVPLSPK 16 1 1 Phospho (STY) _RS(ph)PQQTVPYVVPLSPK_ RS(0.992)PQQT(0.008)VPYVVPLSPK RS(21.1)PQQT(-21.1)VPY(-57.25)VVPLS(-66.38)PK 0 0 1 1 H0Y6S1;B4DRC2;B4DZR9;Q9UQR0 H0Y6S1 H0Y6S1 SCML2 Sex comb on midleg-like protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 632.0048 3 625.995793 1874.96555 76778.46 0.73084 0.0004575 -0.064204 -4.0191E-05 0.66664 0.00041731 626.330034305205 632.003296902532 110.31 0.74498 110.31 109.96 110.71 0 350 63 7 0 0 0 1.4605E-05 3 64885 67.416 67.416 4 0.87596 1.0302 0 41254000 19701000 21553000 4888 654 2525 2789 7980;7981;7982 7981 1086;1087 RSPQQTVPYVVPLSPK 16 1 1 Phospho (STY) _RS(ph)PQQTVPYVVPLSPK_ RS(0.985)PQQT(0.015)VPYVVPLSPK RS(18.26)PQQT(-18.26)VPY(-45.1)VVPLS(-66.2)PK 0 0 1 1 H0Y6S1;B4DRC2;B4DZR9;Q9UQR0 H0Y6S1 H0Y6S1 SCML2 Sex comb on midleg-like protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 938.4907 2 938.490051 1874.96555 64424.49 0.72518 0.00068058 0.03317 3.113E-05 0.75835 0.00071171 938.991653808691 947.501220121962 110.3 0.67525 110.3 109.96 110.64 0 239 58 6 0 0 0 1.4465E-06 1 64957 72.958 65.047 4 0.76323 0.88751 0 30369000 15999000 14369000 4889 654 2525 2789 7983 7983 1086;1087 RSPQQTVPYVVPLSPK 16 1 1 2 Phospho (STY) _RS(ph)PQQTVPYVVPLS(ph)PK_ RS(0.889)PQQT(0.11)VPYVVPLS(1)PK RS(9.06)PQQT(-9.06)VPY(-36.92)VVPLS(43.15)PK 0 0 2 1 H0Y6S1;B4DRC2;B4DZR9;Q9UQR0 H0Y6S1 H0Y6S1 SCML2 Sex comb on midleg-like protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 978.473 2 978.473216 1954.93188 61338.95 0.51562 0.00050452 0.19824 0.00019397 0.71385 0.00069848 978.473249324908 987.484714046757 111.09 0.92335 111.09 110.68 111.6 7.6294E-06 533 80 9 0 0 0 3.5289E-07 1 65422 78.794 69.107 6 0.55309 0.66879 0 262440000 160570000 101870000 4890 654 2525 2790 7984 7984 1086;1087 RSPQQTVPYVVPLSPK 16 1 1 2 Phospho (STY) _RS(ph)PQQTVPYVVPLS(ph)PK_ RS(0.985)PQQT(0.017)VPY(0.057)VVPLS(0.94)PK RS(18.61)PQQT(-18.61)VPY(-12.23)VVPLS(12.23)PK 0 0 2 1 H0Y6S1;B4DRC2;B4DZR9;Q9UQR0 H0Y6S1 H0Y6S1 SCML2 Sex comb on midleg-like protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 652.6517 3 652.651236 1954.93188 74155.27 0.8362 0.00054575 -0.021936 -1.4317E-05 0.81426 0.00053143 652.98555325371 658.658524065339 111.08 0.65143 111.08 110.77 111.42 0 320 57 8 0 0 0 0.00015885 1 65516 44.567 33.706 6 0.56454 0.67116 0 71331000 45261000 26070000 4891 654 2525 2790 7985 7985 1086;1087 RSPQQTVPYVVPLSPK 16 1 1 2 Phospho (STY) _RS(ph)PQQTVPYVVPLS(ph)PK_ RS(0.871)PQQT(0.129)VPY(0.047)VVPLS(0.953)PK RS(8.21)PQQT(-8.21)VPY(-12.83)VVPLS(12.83)PK 0 0 2 1 H0Y6S1;B4DRC2;B4DZR9;Q9UQR0 H0Y6S1 H0Y6S1 SCML2 Sex comb on midleg-like protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 658.6596 3 652.651236 1954.93188 74742.93 1.3385 0.00087357 -0.35208 -0.00022978 0.98641 0.00064378 652.985339844886 658.658477678263 116.57 0.84967 116.57 116.15 117 0 542 80 8 0 0 0 0.00015725 1 75105 44.711 38.14 6 1.0846 0.83601 0 42974000 21846000 21128000 4892 654 2525 2790 7986 7986 1086;1087 RSRKESYSVYVYK 13 2 2 2 Phospho (STY) _RS(ph)RKES(ph)YSVYVYK_ RS(0.865)RKES(0.865)Y(0.215)S(0.053)VY(0.002)VYK RS(8.79)RKES(8.79)Y(-8.79)S(-16.13)VY(-31.11)VY(-41.43)K 0 0 2 3 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;P57053 B2R4S9 B2R4S9 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 608.9431 3 608.940898 1823.80087 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.954 1 82.954 82.454 83.454 0 0 0 0 0.0017204 1 44400 43.991 29.908 15 4893 21 2526 2791 7987 7987 29;30 RSRKESYSVYVYK 13 2 2 2 Phospho (STY) _RS(ph)RKES(ph)YSVYVYK_ RS(0.865)RKES(0.865)Y(0.215)S(0.053)VY(0.002)VYK RS(8.79)RKES(8.79)Y(-8.79)S(-16.13)VY(-31.11)VY(-41.43)K 0 0 2 3 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;P57053 B2R4S9 B2R4S9 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 608.944 3 608.940898 1823.80087 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.022 1 83.022 82.522 83.522 0 0 0 0 0.0017204 1 44450 43.991 30.855 15 4894 21 2526 2791 7988 7988 29;30 RSSDTSGNEASEIESVK 17 1 1 Phospho (STY) _RSS(ph)DTSGNEASEIESVK_ RS(0.159)S(0.833)DT(0.004)S(0.004)GNEASEIESVK RS(-7.19)S(7.19)DT(-22.96)S(-22.96)GNEAS(-44.09)EIES(-71.4)VK 0 0 1 1 D6R9S4;Q09GN1;Q71F23;A5D8X7;A8K8D2 D6R9S4 D6R9S4 CENPU;MLF1IP Centromere protein U MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 947.4124 2 938.402024 1874.78949 63475.06 0.57251 0.00053724 -0.1505 -0.00014123 0.42201 0.00039601 938.401795678682 947.413166517335 66.031 0.46573 66.031 65.802 66.268 0 127 36 4 0 0 0 4.3209E-07 2 31887 76.713 76.713 6 0.71709 0.83687 0 33490000 18737000 14753000 4895 772 2527 2792 7989;7990 7989 1306;1307;2814 RSSDTSGNEASEIESVK 17 1 1 2 Phospho (STY) _RSS(ph)DT(ph)SGNEASEIESVK_ RS(0.147)S(0.853)DT(0.555)S(0.445)GNEASEIESVK RS(-7.66)S(7.66)DT(0.96)S(-0.96)GNEAS(-31.02)EIES(-62.74)VK 0 0 2 1 D6R9S4;Q09GN1;Q71F23;A5D8X7;A8K8D2 D6R9S4 D6R9S4 CENPU;MLF1IP Centromere protein U ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 978.3859 2 978.385189 1954.75583 NaN NaN NaN -0.13145 -0.0001286 NaN NaN NaN NaN 63.076 1.5345 63.076 62.24 63.774 0 0 0 0 1.2883E-11 1 29651 93.226 73.902 15 NaN NaN 0 23199000 23199000 0 4896 772 2527 2793 7991 7991 1306;1307;2814 RSSDTSGNEASEIESVK 17 1 1 2 Phospho (STY) _RS(ph)SDT(ph)SGNEASEIESVK_ RS(0.497)S(0.509)DT(0.542)S(0.447)GNEAS(0.005)EIESVK RS(0.54)S(-0.54)DT(0.69)S(-0.69)GNEAS(-21.47)EIES(-37.01)VK 0 0 2 1 D6R9S4;Q09GN1;Q71F23;A5D8X7;A8K8D2 D6R9S4 D6R9S4 CENPU;MLF1IP Centromere protein U MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 978.3867 2 978.385189 1954.75583 60027.94 0.76369 0.00074718 -0.40184 -0.00039315 0.36185 0.00035403 978.385345412706 987.396377224662 57.903 1.3355 57.903 57.231 58.567 0 734 120 8 0 0 0 7.3062E-05 1 35502 47.204 40.972 15 0.96397 0.74428 0 111510000 58882000 52629000 4897 772 2527 2793 7992 7992 1306;1307;2814 RSSFSMEEGDVL 12 0 1 Oxidation (M),Phospho (STY) _RSS(ph)FSM(ox)EEGDVL_ RSSFSM(1)EEGDVL RS(0.097)S(0.752)FS(0.151)MEEGDVL RSSFSM(41.64)EEGDVL RS(-8.91)S(6.96)FS(-6.96)MEEGDVL 0 1 1 1 A0A024RCY3;B4DPL3;B0QYS6;B0QYS7;P19484;B1AKB5 A0A024RCY3 A0A024RCY3 TFEB Transcription factor EB MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 731.7957 2 726.789264 1451.56398 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.322 1 88.322 87.822 88.822 7.6294E-06 0 0 0 0.006739 1 48191 41.644 31.412 3 4898 220 2528 2794 7993 7993 54 345 RSSPAAFINPPIGTVTPALK 20 1 1 Phospho (STY) _RS(ph)SPAAFINPPIGTVTPALK_ RS(0.5)S(0.5)PAAFINPPIGTVTPALK RS(0)S(0)PAAFINPPIGT(-36.4)VT(-38.71)PALK 0 0 1 1 Q96DI9;F6VRR5;B4E0L0;Q9BY77;B4DSH9;Q6R954;F8WEE2;Q8WUT1;F8WCX5;Q659C6 Q96DI9 Q96DI9 POLDIP3;PDIP46;DKFZp434G0310 Polymerase delta-interacting protein 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 712.7194 3 706.376673 2116.10819 73045.19 1.0356 0.00073152 0.17254 0.00012188 1.2081 0.0008534 706.711083753339 712.384264503933 125.72 0.54929 125.72 125.42 125.97 0 285 49 7 0 0 0 5.8151E-05 1 81189 40.756 37.315 4 0.86417 0.67111 0 12229000 6023800 6205300 4899 676 2529 2795 7994 7994 1121;1122 RSTITSR 7 0 2 Unmodified _RSTITSR_ 0 0 0 1 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;P57053;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257;Q6DRA6;Q6DN03 B2R4S9;A0A024RCJ2 B2R4S9 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 410.7357 2 410.735409 819.456264 93514.9 0.069328 2.8476E-05 0.18272 7.5048E-05 0.25204 0.00010352 410.735362602654 420.743681756506 64.19 0.79216 64.19 63.867 64.659 0 170 55 6 0 0 0 6.2054E-05 1 30393 129.72 16.619 1 0.84645 1.0553 0 145180000 81011000 64170000 4900 21;211 2530 2796 7995 7995 RSVAVSDEEEVEEEAER 17 0 2 Phospho (STY) _RSVAVS(ph)DEEEVEEEAER_ RS(0.135)VAVS(0.865)DEEEVEEEAER RS(-8.07)VAVS(8.07)DEEEVEEEAER 0 0 1 1 Q9Y6X9 Q9Y6X9 Q9Y6X9 MORC2 MORC family CW-type zinc finger protein 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 688.298 3 681.623189 2041.84774 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.215 1 81.215 80.715 81.715 0 0 0 0 0.00025152 1 43184 60.133 45.204 2 4901 1257 2531 2797 7996 7996 2594 RSVENQESVEIINDLK 16 1 1 Unmodified _RSVENQESVEIINDLK_ 0 0 0 1 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 625.3293 3 624.993566 1871.95887 79415.7 1.1522 0.00072011 -0.071859 -4.4912E-05 1.0803 0.0006752 624.993513323089 631.000988210256 100.53 0.3463 100.53 100.34 100.69 0 134 32 6 0 0 0 0.00092269 2 64621 35.133 30.962 1 1.9368 1.6644 0 7250900 2782300 4468600 4902 1170 2532 2798 7997;7998 7998 RSVQEGENPDDGVRGSPPEDYR 22 0 3 Phospho (STY) _RSVQEGENPDDGVRGS(ph)PPEDYR_ RS(0.05)VQEGENPDDGVRGS(0.949)PPEDY(0.001)R RS(-12.76)VQEGENPDDGVRGS(12.76)PPEDY(-29.98)R 0 0 1 2 Q5TCT4;A2A2V2;P42696;H7C5M1 Q5TCT4 Q5TCT4 RBM34 RNA-binding protein 34 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 857.3758 3 847.033022 2538.07724 66571.2 0.46329 0.00039242 -0.057234 -4.8479E-05 0.40605 0.00034394 847.366981308486 857.041368895072 73.202 1.3071 73.202 72.81 74.117 0 555 113 9 0 0 0 1.4607E-07 1 37479 52.391 25.974 3 0.92569 1.0717 0 91236000 42177000 49059000 4903 404 2533 2799 7999 7999 692 RTADSSSSEDEEEYVVEK 18 1 1 2 Phospho (STY) _RTADSS(ph)S(ph)SEDEEEYVVEK_ RT(0.052)ADS(0.166)S(0.66)S(0.561)S(0.561)EDEEEYVVEK RT(-13.59)ADS(-7.67)S(1.75)S(0)S(0)EDEEEY(-35.54)VVEK 0 0 2 1 V9HWG0;P45973;Q6I9T7;F8VNY3 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1110.9187 2 1110.41688 2218.81921 57385.29 0.34986 0.00038849 -0.14903 -0.00016549 0.20082 0.000223 1110.91783973323 1119.42905016105 65.375 1.8053 65.375 64.2 66.005 0 318 133 5 0 0 0 4.3346E-07 1 31432 69.716 69.716 15 0.37973 0.44609 0 40055000 26780000 13275000 4904 993 2534 2800 8000 8000 1765;1766;1767;1768 RTAFYNEDDSEEEQR 15 0 2 Phospho (STY) _RTAFYNEDDS(ph)EEEQR_ RT(0.001)AFYNEDDS(0.999)EEEQR RT(-30.72)AFY(-38.86)NEDDS(30.72)EEEQR 0 0 1 1 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 995.3935 2 984.883998 1967.75344 61055.75 0.40601 0.00039988 0.10668 0.00010507 0.5127 0.00050495 984.884073817542 994.892365572836 65.47 0.63863 65.47 65.137 65.776 0 326 47 9 0 0 0 0.00015873 2 31328 69.729 61 3 0.69986 0.87282 0 156250000 91513000 64738000 4905 1167 2535 2801 8001;8002 8002 2271 RTAFYNEDDSEEEQR 15 0 2 Phospho (STY) _RTAFYNEDDS(ph)EEEQR_ RTAFYNEDDS(1)EEEQR RT(-66.08)AFY(-58.39)NEDDS(58.39)EEEQR 0 0 1 1 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 663.5983 3 656.925091 1967.75344 76585.16 0.80726 0.00053031 -0.12753 -8.378E-05 0.67973 0.00044653 656.925030522657 663.597205116102 65.434 0.47371 65.434 65.204 65.678 0 151 35 6 0 0 0 7.7948E-06 2 31374 78.917 73.862 3 0.76303 0.94575 0 35421000 21057000 14364000 4906 1167 2535 2801 8003;8004 8004 2271 RTAFYNEDDSEEEQR 15 0 2 Phospho (STY) _RTAFYNEDDS(ph)EEEQR_ RTAFYNEDDS(1)EEEQR RT(-69.43)AFY(-61.74)NEDDS(61.74)EEEQR 0 0 1 1 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 663.5978 3 656.925091 1967.75344 75164.55 1.0251 0.00067341 0.10762 7.0701E-05 1.1327 0.00074411 656.925170690202 663.597395319739 36.514 0.90626 36.514 36.176 37.082 0 335 76 7 0 0 0 9.3849E-07 2 20609 82.265 77.56 3 1.4772 1.2705 0 19316000 7243600 12072000 4907 1167 2535 2801 8005;8006 8005 2271 RTAFYNEDDSEEEQR 15 0 2 Phospho (STY) _RTAFYNEDDS(ph)EEEQR_ RTAFYNEDDS(1)EEEQR RT(-36.15)AFY(-57.97)NEDDS(36.15)EEEQR 0 0 1 1 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 994.8934 2 984.883998 1967.75344 NaN NaN NaN 0.97842 0.00096363 NaN NaN NaN NaN 36.503 1.3107 36.503 36.104 37.414 0 0 0 0 8.4726E-06 1 20566 85.636 61.445 3 NaN NaN 0 86544000 0 86544000 4908 1167 2535 2801 8007 8007 2271 RTDEAAFQK 9 1 1 Unmodified _RTDEAAFQK_ 0 0 0 1 Q5Q9Z3;P26447 Q5Q9Z3 Q5Q9Z3 S100A4 Protein S100-A4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 533.2692 2 533.269813 1064.52507 81291.59 0.53119 0.00028327 1.1551 0.00061598 1.6863 0.00089925 533.269618663399 542.280970089499 67.816 0.35963 67.816 67.643 68.003 0 122 29 5 0 0 0 8.3727E-05 1 33405 117.31 72.558 1 0.64321 0.76304 0 60365000 34622000 25743000 4909 978 2536 2802 8008 8008 RTEMENEFVLIK 12 1 1 Oxidation (M) _RTEM(ox)ENEFVLIK_ RTEM(1)ENEFVLIK RTEM(79.74)ENEFVLIK 0 1 0 1 CON__P05787;P05787;Q969I0;F8VUG2;CON__H-INV:HIT000016045;F8VP67;F8W1U3 CON__P05787;F8W1U3 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 771.902 2 762.889966 1523.76538 70016.75 0.74189 0.00056598 0.081404 6.2103E-05 0.82329 0.00062808 762.890040462495 771.901344926996 121.86 1.4841 121.86 121.22 122.71 -7.6294E-06 424 111 6 0 0 0 0.00026626 6 73788 79.741 20.785 1 1.3902 1.5844 0 22592000 9778100 12814000 + 4910 754;832 2537 2803 8009;8010;8011;8012;8013;8014 8013 202 RTEMENEFVLIK 12 1 1 Oxidation (M) _RTEM(ox)ENEFVLIK_ RTEM(1)ENEFVLIK RTEM(62.92)ENEFVLIK 0 1 0 1 CON__P05787;P05787;Q969I0;F8VUG2;CON__H-INV:HIT000016045;F8VP67;F8W1U3 CON__P05787;F8W1U3 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 508.9297 3 508.929069 1523.76538 NaN NaN NaN 0.2217 0.00011283 NaN NaN NaN NaN 121.8 0.27007 121.8 121.69 121.96 0 0 0 0 0.00058179 1 73660 62.924 42.261 1 NaN NaN 0 3219600 3219600 0 + 4911 754;832 2537 2803 8015 8015 202 RTEMENEFVLIK 12 1 1 Oxidation (M) _RTEM(ox)ENEFVLIK_ RTEM(1)ENEFVLIK RTEM(44.31)ENEFVLIK 0 1 0 1 CON__P05787;P05787;Q969I0;F8VUG2;CON__H-INV:HIT000016045;F8VP67;F8W1U3 CON__P05787;F8W1U3 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 771.9014 2 762.889966 1523.76538 NaN NaN NaN NaN NaN NaN NaN NaN NaN 120.52 1 120.52 120.02 121.02 -7.6294E-06 0 0 0 0.0030732 1 72585 44.309 17.795 1 + 4912 754;832 2537 2803 8016 8016 202 RTEMENEFVLIK 12 1 1 Oxidation (M) _RTEM(ox)ENEFVLIK_ RTEM(1)ENEFVLIK RTEM(52.79)ENEFVLIK 0 1 0 1 CON__P05787;P05787;Q969I0;F8VUG2;CON__H-INV:HIT000016045;F8VP67;F8W1U3 CON__P05787;F8W1U3 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 771.9016 2 762.889966 1523.76538 NaN NaN NaN NaN NaN NaN NaN NaN NaN 120.57 1 120.57 120.07 121.07 0 0 0 0 0.00083359 1 72618 52.79 17.279 1 + 4913 754;832 2537 2803 8017 8017 202 RTEQEEDEELLTESSK 16 1 1 Unmodified _RTEQEEDEELLTESSK_ 0 0 0 1 B7ZAX9;B4DZC0;O60264;Q4W5G3 B7ZAX9 B7ZAX9 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 647.6393 3 641.632363 1921.87526 76306.41 0.89654 0.00057525 0.057598 3.6957E-05 0.95414 0.0006122 641.966987775694 647.639770110923 92.422 0.85426 92.422 91.947 92.801 0 283 76 6 0 0 0 4.5446E-12 3 51026 92.307 71.368 1 2.651 3.1482 0 65494000 18066000 47428000 4914 672 2538 2804 8018;8019;8020 8018 RTNAENEFVTIK 12 1 1 Unmodified _RTNAENEFVTIK_ 0 0 0 1 H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRG2 H6VRG3;H6VRG2 H6VRG2 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 474.5847 3 474.584291 1420.73104 NaN NaN NaN -0.13828 -6.5625E-05 NaN NaN NaN NaN 105.82 1.1943 105.82 104.84 106.03 0 0 0 0 0.0064516 1 60804 35.657 26.836 1 NaN NaN 0 17412000 17412000 0 + 4915 876;877 2539 2805 8021 8021 RTNAENEFVTIK 12 1 1 Unmodified _RTNAENEFVTIK_ 0 0 0 1 H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRG2 H6VRG3;H6VRG2 H6VRG2 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 711.3735 2 711.372798 1420.73104 NaN NaN NaN -0.15581 -0.00011084 NaN NaN NaN NaN 105.44 1.7011 105.44 104.47 106.17 0 0 0 0 0.00025384 2 61501 84.289 25.613 1 NaN NaN 0 57923000 57923000 0 + 4916 876;877 2539 2805 8022;8023 8023 RTNIIPVLEDAR 12 0 2 Unmodified _RTNIIPVLEDAR_ 0 0 0 1 A6NHQ2 A6NHQ2 A6NHQ2 FBLL1 rRNA/tRNA 2-O-methyltransferase fibrillarin-like protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 466.6026 3 466.268414 1395.78341 92094.66 0.36063 0.00016815 -0.20231 -9.4331E-05 0.15832 7.382E-05 466.268240586594 472.940384809202 123.89 0.95222 123.89 123.59 124.55 0 205 82 5 0 0 0 0.005157 2 74992 42.209 0 1 0.6522 0.76193 0 8649100 5109900 3539200 4917 427 2540 2806 8024;8025 8024 RTPAPPEPGSPAPGEGPSGR 20 0 2 Phospho (STY) _RTPAPPEPGS(ph)PAPGEGPSGR_ RT(0.001)PAPPEPGS(0.998)PAPGEGPS(0.001)GR RT(-31.11)PAPPEPGS(28.92)PAPGEGPS(-28.92)GR 0 0 1 1 A0A024R4Q5;P0C1Z6 A0A024R4Q5 A0A024R4Q5 TFPT TCF3 fusion partner MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 665.6443 3 665.309099 1992.90547 73998.18 0.86771 0.0005773 -0.017268 -1.1489E-05 0.85044 0.00056581 665.643318553852 671.981406098943 63.855 0.59713 63.855 63.653 64.25 3.8147E-06 285 42 8 0 0 0 2.9534E-06 2 30099 52.144 40.357 3 0.63564 0.79339 0 190760000 122040000 68717000 4918 90 2541 2807 8026;8027 8026 118 RTPAPPEPGSPAPGEGPSGR 20 0 2 Phospho (STY) _RTPAPPEPGS(ph)PAPGEGPSGR_ RTPAPPEPGS(1)PAPGEGPSGR RT(-47.02)PAPPEPGS(47.02)PAPGEGPS(-54.2)GR 0 0 1 1 A0A024R4Q5;P0C1Z6 A0A024R4Q5 A0A024R4Q5 TFPT TCF3 fusion partner MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 671.9822 3 665.309099 1992.90547 73798.15 0.97346 0.00064765 0.206 0.00013705 1.1795 0.0007847 665.643546222188 671.981453974579 44.77 2.5561 44.77 43.298 45.854 0 1391 235 9 0 0 0 3.8604E-14 1 26983 82.342 66.642 3 1.1039 0.96004 0 90631000 44629000 46002000 4919 90 2541 2807 8028 8028 118 RTPDFHDK 8 1 1 Unmodified _RTPDFHDK_ 0 0 0 1 P24311 P24311 P24311 COX7B Cytochrome c oxidase subunit 7B, mitochondrial MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 345.1775 3 339.170041 1014.48829 101983.4 -0.36829 -0.00012491 0.43588 0.00014784 0.067593 2.2925E-05 339.170052495787 345.177562269547 83.056 1.0775 83.056 82.356 83.434 0 463 98 8 0 0 0 0.012067 1 44169 42.19 33.727 1 0.97992 1.1831 0 233390000 113140000 120250000 4920 976 2542 2808 8029 8029 RTSLSAEDAEVTK 13 1 1 Phospho (STY) _RT(ph)SLSAEDAEVTK_ RT(0.504)S(0.363)LS(0.133)AEDAEVTK RT(1.43)S(-1.43)LS(-5.8)AEDAEVT(-37.26)K 0 0 1 1 B4DIS0;A0A024R7V7;Q9P2D1 B4DIS0 B4DIS0 CHD7 Chromodomain-helicase-DNA-binding protein 7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 752.8552 2 743.842885 1485.67122 71969.36 0.85394 0.0006352 0.088053 6.5497E-05 0.94199 0.0007007 743.842696265937 752.854392438506 64.119 0.34213 64.119 63.939 64.281 0 78 22 5 0 0 0 0.0071167 1 30437 61.641 32.835 4 0.71491 0.81041 0 21077000 10985000 10092000 4921 142 2543 2809 8030 8030 2645 RVDALNDEIR 10 0 2 Unmodified _RVDALNDEIR_ 0 0 0 1 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 Q86VX4 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 610.8291 2 600.820201 1199.62585 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.396 1 93.396 92.896 93.896 0 0 0 0 0.010884 1 52042 67.563 45.415 1 4922 514 2544 2810 8031 8031 RVDDFKK 7 2 1 Unmodified _RVDDFKK_ 0 0 0 2 B3KRY5;B4DPZ5;B4DNU9;Q6NZI2 B3KRY5 B3KRY5 PTRF Polymerase I and transcript release factor MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 303.1714 3 303.171382 906.492316 108687.2 -0.52943 -0.00016051 0.32617 9.8885E-05 -0.20326 -6.1624E-05 303.171385327908 311.850339729351 83.089 0.82774 83.089 82.564 83.392 0 185 72 4 0 0 0 0.013212 2 44347 47.743 30.45 1 0.8816 1.0331 0 36981000 19766000 17215000 4923 596 2545 2811 8032;8033 8032 RVDDFKK 7 2 1 Unmodified _RVDDFKK_ 0 0 0 2 B3KRY5;B4DPZ5;B4DNU9;Q6NZI2 B3KRY5 B3KRY5 PTRF Polymerase I and transcript release factor MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 454.2534 2 454.253434 906.492316 90969.51 0.029062 1.3202E-05 0.035458 1.6107E-05 0.06452 2.9308E-05 454.253368077221 467.271742695294 83.086 0.78203 83.086 82.501 83.283 0 224 70 6 0 0 0 0.034885 1 44580 79.116 6.0772 1 0.89341 1.0498 0 61695000 30090000 31605000 4924 596 2545 2811 8034 8034 RVEEDIQQQK 10 1 1 Unmodified _RVEEDIQQQK_ 0 0 0 1 P15924 P15924 P15924 DSP Desmoplakin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 636.8309 2 636.830766 1271.64698 76445.93 0.76349 0.00048621 -1.052 -0.00066992 -0.28847 -0.00018371 636.829596089976 645.841793494496 65.27 0.20233 65.27 65.161 65.364 0 28 14 4 0 0 0 0.024193 1 31394 60.102 21.08 1 0.70683 0.77313 0 10153000 5496100 4656900 4925 965 2546 2812 8035 8035 RVEILNEHR 9 0 2 Unmodified _RVEILNEHR_ 0 0 0 1 Q9NTJ3;E9PD53;B3KXX5;Q6P169;C9JR83;Q6NSG3;Q58F29 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 389.2191 3 389.219395 1164.63635 95392.72 -0.21353 -8.311E-05 0.10599 4.1253E-05 -0.10754 -4.1858E-05 389.219382152181 395.891602232157 110.5 2.0655 110.5 109.58 111.65 0 740 173 7 0 0 0 4.8234E-06 7 65203 118.71 104.5 1 0.78164 0.97504 0 165500000 92027000 73471000 4926 1220 2547 2813 8036;8037;8038;8039;8040;8041;8042 8038 RVEILNEHR 9 0 2 Unmodified _RVEILNEHR_ 0 0 0 1 Q9NTJ3;E9PD53;B3KXX5;Q6P169;C9JR83;Q6NSG3;Q58F29 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 389.2195 3 389.219395 1164.63635 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112 1 112 111.5 112.5 0 0 0 0 0.024855 1 66390 41.399 21.638 1 4927 1220 2547 2813 8043 8043 RVEILNEHR 9 0 2 Unmodified _RVEILNEHR_ 0 0 0 1 Q9NTJ3;E9PD53;B3KXX5;Q6P169;C9JR83;Q6NSG3;Q58F29 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 389.219 3 389.219395 1164.63635 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.82 1 112.82 112.32 113.32 0 0 0 0 0.034754 1 66978 37.344 14.703 1 4928 1220 2547 2813 8044 8044 RVETSEHFR 9 0 2 Unmodified _RVETSEHFR_ 0 0 0 1 A0A024RBE7;P42167 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 387.5321 3 387.53175 1159.57342 95587.57 0.29706 0.00011512 0.63124 0.00024463 0.9283 0.00035975 387.531910930391 394.204103266417 91.512 0.40263 91.512 91.288 91.691 0 76 32 6 0 0 0 1.6193E-05 2 50635 98.044 77.174 1 0.80161 0.98742 0 28506000 15826000 12680000 4929 196 2548 2814 8045;8046 8046 RVETSEHFR 9 0 2 Unmodified _RVETSEHFR_ 0 0 0 1 A0A024RBE7;P42167 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 394.203 3 387.53175 1159.57342 NaN NaN NaN 0.40276 0.00015608 NaN NaN NaN NaN 87.283 0.10987 87.283 87.238 87.348 7.6294E-06 0 0 0 0.015401 1 47394 41.347 11.874 1 NaN NaN 0 4617700 0 4617700 4930 196 2548 2814 8047 8047 RVETSEHFR 9 0 2 Unmodified _RVETSEHFR_ 0 0 0 1 A0A024RBE7;P42167 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 387.5317 3 387.53175 1159.57342 NaN NaN NaN 0.58756 0.0002277 NaN NaN NaN NaN 89.276 0.29411 89.276 89.16 89.454 0 0 0 0 0.011721 1 48863 36.318 15.447 1 NaN NaN 0 5471200 5471200 0 4931 196 2548 2814 8048 8048 RVETSEHFR 9 0 2 Unmodified _RVETSEHFR_ 0 0 0 1 A0A024RBE7;P42167 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 394.204 3 387.53175 1159.57342 NaN NaN NaN 0.56986 0.00022084 NaN NaN NaN NaN 91.435 0.19806 91.435 91.288 91.486 0 0 0 0 0.0018327 1 50549 67.113 28.091 1 NaN NaN 0 15917000 0 15917000 4932 196 2548 2814 8049 8049 RVETSEHFR 9 0 2 Unmodified _RVETSEHFR_ 0 0 0 1 A0A024RBE7;P42167 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 387.5316 3 387.53175 1159.57342 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.674 1 87.674 87.174 88.174 0 0 0 0 0.0052629 1 47720 48.602 31.931 1 4933 196 2548 2814 8050 8050 RVETSEHFR 9 0 2 Unmodified _RVETSEHFR_ 0 0 0 1 A0A024RBE7;P42167 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 394.2036 3 387.53175 1159.57342 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.022 1 88.022 87.522 88.522 -7.6294E-06 0 0 0 0.013079 1 47976 48.028 17.341 1 4934 196 2548 2814 8051 8051 RVETSEHFR 9 0 2 Unmodified _RVETSEHFR_ 0 0 0 1 A0A024RBE7;P42167 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 394.2079 3 387.53175 1159.57342 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.204 1 88.204 87.704 88.704 0 0 0 0 0.019746 1 48110 43.492 9.3064 1 4935 196 2548 2814 8052 8052 RVETSEHFR 9 0 2 Unmodified _RVETSEHFR_ 0 0 0 1 A0A024RBE7;P42167 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 387.5319 3 387.53175 1159.57342 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.481 1 88.481 87.981 88.981 0 0 0 0 0.00068001 1 48301 70.056 46.026 1 4936 196 2548 2814 8053 8053 RVETSEHFR 9 0 2 Unmodified _RVETSEHFR_ 0 0 0 1 A0A024RBE7;P42167 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 394.2035 3 387.53175 1159.57342 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.929 1 89.929 89.429 90.429 0 0 0 0 0.004861 1 49376 60.064 21.288 1 4937 196 2548 2814 8054 8054 RVETSEHFR 9 0 2 Unmodified _RVETSEHFR_ 0 0 0 1 A0A024RBE7;P42167 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 387.5313 3 387.53175 1159.57342 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.056 1 90.056 89.556 90.556 0 0 0 0 0.00015002 1 49474 76.943 56.073 1 4938 196 2548 2814 8055 8055 RVETSEHFR 9 0 2 Unmodified _RVETSEHFR_ 0 0 0 1 A0A024RBE7;P42167 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 394.2035 3 387.53175 1159.57342 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.695 1 90.695 90.195 91.195 0 0 0 0 0.0051601 1 49948 58.699 17.251 1 4939 196 2548 2814 8056 8056 RVETSEHFR 9 0 2 Unmodified _RVETSEHFR_ 0 0 0 1 A0A024RBE7;P42167 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 387.532 3 387.53175 1159.57342 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.823 1 90.823 90.323 91.323 0 0 0 0 7.3075E-05 1 50048 78.098 54.068 1 4940 196 2548 2814 8057 8057 RVETSEHFR 9 0 2 Unmodified _RVETSEHFR_ 0 0 0 1 A0A024RBE7;P42167 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 394.2039 3 387.53175 1159.57342 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.14 1 91.14 90.64 91.64 0 0 0 0 0.0028251 1 50282 70.399 19.053 1 4941 196 2548 2814 8058 8058 RVETSEHFR 9 0 2 Unmodified _RVETSEHFR_ 0 0 0 1 A0A024RBE7;P42167 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 394.5383 3 387.53175 1159.57342 96150.46 -0.53749 -0.00020829 0.59552 0.00023078 0.058039 2.2492E-05 387.531987087219 394.204001247466 91.927 0.58085 91.927 91.665 92.246 0 145 50 4 0 0 0 0.015002 1 51079 53.597 40.244 1 0.87091 1.0667 0 23849000 10551000 13298000 4942 196 2548 2814 8059 8059 RVETSEHFR 9 0 2 Unmodified _RVETSEHFR_ 0 0 0 1 A0A024RBE7;P42167 A0A024RBE7 A0A024RBE7 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 394.2039 3 387.53175 1159.57342 98609.67 0.20772 8.0499E-05 0.03036 1.1765E-05 0.23808 9.2265E-05 387.531589600909 394.203837651634 16.539 0.21513 16.539 16.451 16.666 0 19 7 4 0 0 0 0.02723 1 3931 21.569 14.441 1 1.1622 1.0986 0 2656800 1087300 1569500 4943 196 2548 2814 8060 8060 RVGMADANSPPKPLSK 16 2 1 Oxidation (M),Phospho (STY) _RVGM(ox)ADANS(ph)PPKPLSK_ RVGM(1)ADANSPPKPLSK RVGMADANS(1)PPKPLSK RVGM(65.18)ADANSPPKPLSK RVGMADANS(35.18)PPKPLS(-35.18)K 0 1 1 2 Q59FP7;A0A024R7E3;P26358;K7EJL0 Q59FP7 Q59FP7 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 588.6226 3 588.62185 1762.84372 78273.26 0.70089 0.00041256 -0.36782 -0.00021651 0.33307 0.00019605 588.95597034895 597.300574382544 67.659 0.64837 67.659 67.478 68.127 7.6294E-06 196 52 6 0 0 0 2.8209E-05 1 33272 65.184 53.57 2 0.41357 0.4859 0 60609000 42090000 18519000 4944 133 2549 2815 8061 8061 28 200 RVGMADANSPPKPLSK 16 2 1 Oxidation (M),Phospho (STY) _RVGM(ox)ADANS(ph)PPKPLSK_ RVGM(1)ADANSPPKPLSK RVGMADANS(1)PPKPLSK RVGM(67.4)ADANSPPKPLSK RVGMADANS(37.21)PPKPLS(-37.21)K 0 1 1 2 Q59FP7;A0A024R7E3;P26358;K7EJL0 Q59FP7 Q59FP7 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 588.6221 3 588.62185 1762.84372 76929.02 0.9493 0.00055878 -0.46889 -0.000276 0.48041 0.00028278 588.621801704515 597.300497221618 25.727 1.4486 25.727 25.214 26.663 0 517 76 10 0 0 0 2.0223E-05 2 11664 67.396 55.604 2 0.72881 0.58708 0 224940000 129070000 95872000 4945 133 2549 2815 8062;8063 8063 28 200 RVLLGETGK 9 1 1 Unmodified _RVLLGETGK_ 0 0 0 1 M0QZC5;P62280;M0R1H6 M0QZC5 M0QZC5 RPS11 40S ribosomal protein S11 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 495.8068 2 486.795466 971.57638 NaN NaN NaN 0.10248 4.9888E-05 NaN NaN NaN NaN 83.123 0.90704 83.123 83.01 83.917 0 0 0 0 0.02479 1 44764 43.083 18.084 1 NaN NaN 0 33407000 0 33407000 4946 911 2550 2816 8064 8064 RVLTLR 6 0 2 Unmodified _RVLTLR_ 0 0 0 1 B3KS36;P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q49AJ9;Q9BT63 B3KS36 B3KS36 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 379.256 2 379.25578 756.497007 99075.16 0.32843 0.00012456 0.029088 1.1032E-05 0.35751 0.00013559 379.255658052891 389.263994677024 95.796 0.46721 95.796 95.678 96.145 0 112 40 6 0 0 0 4.7882E-05 1 53874 133.47 0 1 1.0492 1.3068 0 115390000 57488000 57902000 4947 597 2551 2817 8065 8065 RVNDAEPGSPEAPQGK 16 1 1 Phospho (STY) _RVNDAEPGS(ph)PEAPQGK_ RVNDAEPGS(1)PEAPQGK RVNDAEPGS(45)PEAPQGK 0 0 1 1 F1T0L5;Q8N8A6 F1T0L5 F1T0L5 DDX51 ATP-dependent RNA helicase DDX51 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 875.4007 2 866.388523 1730.76249 NaN NaN NaN 0.19851 0.00017198 NaN NaN NaN NaN 20.821 0.41125 20.821 20.642 21.053 0 0 0 0 0.0036268 1 7571 44.998 32.638 1 NaN NaN 0 27253000 0 27253000 4948 818 2552 2818 8066 8066 1412 RVPAHGHPVIER 12 0 2 Unmodified _RVPAHGHPVIER_ 0 0 0 1 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 342.6965 4 342.696827 1366.7582 NaN NaN NaN -0.31703 -0.00010865 NaN NaN NaN NaN 114.45 0.11641 114.45 114.4 114.52 -7.6294E-06 0 0 0 0.016194 1 68181 27.967 18.279 1 NaN NaN 0 3064900 3064900 0 4949 1213 2553 2819 8067 8067 RVPSPTPAPK 10 1 1 Phospho (STY) _RVPS(ph)PTPAPK_ RVPS(0.97)PT(0.03)PAPK RVPS(15.17)PT(-15.17)PAPK 0 0 1 1 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 565.2919 2 565.291906 1128.56926 81781.43 0.28285 0.00015989 0.22679 0.00012821 0.50964 0.0002881 565.291868030459 574.303295589503 52.913 1.134 52.913 52.378 53.512 0 408 93 6 0 0 0 0.0041171 2 21878 53.569 40.216 2 1.0918 1.2403 0 21681000 10317000 11364000 4950 383 2554 2820 8068;8069 8069 620 RVPSPTPAPK 10 1 1 Phospho (STY) _RVPS(ph)PTPAPK_ RVPS(0.978)PT(0.022)PAPK RVPS(16.44)PT(-16.44)PAPK 0 0 1 1 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 565.2922 2 565.291906 1128.56926 80050.45 -0.11563 -6.5367E-05 0.49951 0.00028237 0.38388 0.000217 565.292243800934 574.303364991127 23.022 0.43665 23.022 22.716 23.153 0 89 22 6 0 0 0 0.00078149 2 9543 74.611 57.94 2 0.93848 0.7157 0 19938000 10836000 9102600 4951 383 2554 2820 8070;8071 8070 620 RVPVPPAAGS 10 0 1 Phospho (STY) _RVPVPPAAGS(ph)_ RVPVPPAAGS(1) RVPVPPAAGS(108.7) 0 0 1 1 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 520.7618 2 515.757699 1029.50085 85661.96 0.30733 0.00015851 -0.19042 -9.8212E-05 0.11691 6.0296E-05 515.75764200812 520.761639420742 67.554 1.4007 67.554 66.823 68.224 0 334 116 4 0 0 0 2.062E-06 5 33179 108.7 100.77 1 0.7953 1.0015 0 52963000 29140000 23823000 4952 928 2555 2821 8072;8073;8074;8075;8076 8074 1572 RVPVPPAAGS 10 0 1 Phospho (STY) _RVPVPPAAGS(ph)_ RVPVPPAAGS(1) RVPVPPAAGS(96.01) 0 0 1 1 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 520.7623 2 515.757699 1029.50085 84531.35 0.81909 0.00042245 -0.067824 -3.4981E-05 0.75127 0.00038747 515.75762605256 520.761734557234 55.776 3.0237 55.776 54.282 57.306 0 907 260 4 0 0 0 8.7838E-06 6 34798 96.015 91.42 1 1.0036 0.75394 0 20729000 10095000 10633000 4953 928 2555 2821 8077;8078;8079;8080;8081;8082 8081 1572 RVSDILR 7 0 2 Unmodified _RVSDILR_ 0 0 0 1 B9A008;E7ENR5;B8ZZ47;H0Y714;Q96G21 B9A008 B9A008 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 429.7627 2 429.761426 857.5083 NaN NaN NaN 2.5299 0.0010872 NaN NaN NaN NaN 100.39 0.69948 100.39 99.994 100.69 0 0 0 0 0.015415 1 57681 55.676 0 1 NaN NaN 0 6611200 6611200 0 4954 727 2556 2822 8083 8083 RVSGDAAQDLDR 12 0 2 Phospho (STY) _RVS(ph)GDAAQDLDR_ RVS(1)GDAAQDLDR RVS(62.36)GDAAQDLDR 0 0 1 1 Q96RG4;Q96RG5;Q9Y4H2 Q96RG4 Q96RG4 IRS2 Insulin receptor substrate 2 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 691.807 2 691.806637 1381.59872 NaN NaN NaN 0.67039 0.00046378 NaN NaN NaN NaN 28.328 0.25758 28.328 28.206 28.464 1.9073E-06 0 0 0 0.0041639 1 14159 62.357 32.152 1 NaN NaN 0 7358100 7358100 0 4955 1186 2557 2823 8084 8084 2336 RVSISEGDDK 10 1 1 Unmodified _RVSISEGDDK_ 0 0 0 1 Q96BS4;P22087;M0R299;M0QXL5;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 553.2775 2 553.277835 1104.54112 80360.23 0.6949 0.00038447 -0.48401 -0.00026779 0.21089 0.00011668 553.277531755743 562.28854171969 67.713 0.4875 67.713 67.516 68.003 0 169 39 7 0 0 0 1.5893E-05 2 33298 110.74 49.064 1 0.77068 0.93016 0 227260000 131570000 95698000 4956 974 2558 2824 8085;8086 8086 RVSLEPHQGPGTPESK 16 1 1 Phospho (STY) _RVS(ph)LEPHQGPGTPESK_ RVS(1)LEPHQGPGTPESK RVS(81.6)LEPHQGPGT(-81.6)PES(-97.15)K 0 0 1 1 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q96HN5;H0YFY6;Q7Z757;Q59HB8;Q9UNL7 A0A087WY61 A0A087WY61 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 600.2883 3 600.287635 1797.84108 78671.8 0.66924 0.00040174 -0.85175 -0.0005113 -0.18251 -0.00010956 600.28687457542 606.294714067168 72.285 0.6789 72.285 71.897 72.576 0 160 45 5 0 0 0 2.2233E-16 1 36666 100.95 86.932 3 0.46547 0.54125 0 30339000 19576000 10763000 4957 110 2559 2825 8087 8087 147;2637 RVSLEPHQGPGTPESK 16 1 1 Phospho (STY) _RVSLEPHQGPGT(ph)PESK_ RVSLEPHQGPGT(0.997)PES(0.003)K RVS(-45.31)LEPHQGPGT(25.25)PES(-25.25)K 0 0 1 1 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q96HN5;H0YFY6;Q7Z757;Q59HB8;Q9UNL7 A0A087WY61 A0A087WY61 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 600.2878 3 600.287635 1797.84108 79008.59 0.78682 0.00047232 -0.28352 -0.00017019 0.5033 0.00030212 600.6216745535 606.294998088126 76.871 0.49651 76.871 76.623 77.12 0 196 42 6 0 0 0 2.6002E-05 2 39999 59.469 45.159 3 0.46469 0.54438 0 37144000 24863000 12281000 4958 110 2559 2825 8088;8089 8089 147;2637 RVSLEPHQGPGTPESK 16 1 1 Phospho (STY) _RVSLEPHQGPGT(ph)PESK_ RVSLEPHQGPGT(0.997)PES(0.003)K RVS(-43.6)LEPHQGPGT(25.44)PES(-25.44)K 0 0 1 1 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q96HN5;H0YFY6;Q7Z757;Q59HB8;Q9UNL7 A0A087WY61 A0A087WY61 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 606.2958 3 600.287635 1797.84108 78417.84 1.0038 0.00060257 -0.15097 -9.0626E-05 0.85282 0.00051194 600.287387626156 606.295085123935 26.118 1.2665 26.118 25.732 26.999 0 466 66 11 0 0 0 1.4168E-05 1 12130 66.889 55.784 3 1.2635 0.9751 0 86170000 40824000 45346000 4959 110 2559 2825 8090 8090 147;2637 RVSLEPHQGPGTPESK 16 1 1 Phospho (STY) _RVS(ph)LEPHQGPGTPESK_ RVS(1)LEPHQGPGTPESK RVS(34.2)LEPHQGPGT(-34.2)PES(-42.7)K 0 0 1 1 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q96HN5;H0YFY6;Q7Z757;Q59HB8;Q9UNL7 A0A087WY61 A0A087WY61 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 600.6218 3 600.287635 1797.84108 82008.99 0.99992 0.00060024 0.22924 0.00013761 1.2292 0.00073785 600.621899749982 606.295454056212 32.26 1.0388 32.26 31.536 32.575 0 271 81 5 0 0 0 7.8281E-05 1 17257 47.75 38.808 3 1.0332 0.84069 0 9229700 4100100 5129500 4960 110 2559 2825 8091 8091 147;2637 RVSLEPHQGPGTPESK 16 1 1 Unmodified _RVSLEPHQGPGTPESK_ 0 0 0 1 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q96HN5;H0YFY6;Q7Z757;Q59HB8;Q9UNL7 A0A087WY61 A0A087WY61 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 573.6325 3 573.632192 1717.87475 80729.16 0.10462 6.0013E-05 -0.072528 -4.1604E-05 0.032092 1.8409E-05 573.966425457969 579.63967967989 92.037 0.75784 92.037 91.691 92.449 7.6294E-06 230 67 6 0 0 0 1.5322E-16 1 50980 105.39 83.235 1 0.91322 1.0834 0 60542000 37461000 23081000 4961 110 2559 2826 8092 8092 RVSLEPHQGPGTPESK 16 1 1 2 Phospho (STY) _RVS(ph)LEPHQGPGT(ph)PESK_ RVS(1)LEPHQGPGT(0.991)PES(0.009)K RVS(48.92)LEPHQGPGT(20.33)PES(-20.33)K 0 0 2 1 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q96HN5;H0YFY6;Q7Z757;Q59HB8;Q9UNL7 A0A087WY61 A0A087WY61 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 632.9512 3 626.943079 1877.80741 76192.41 0.96063 0.00060226 0.45027 0.0002823 1.4109 0.00088456 627.277644424752 632.95086748182 36.357 1.706 36.357 35.698 37.404 0 809 144 9 0 0 0 0.0001274 1 20139 54.582 45.485 3 1.5781 1.2172 0 62268000 25609000 36659000 4962 110 2559 2827 8093 8093 147;2637 RVSPLNLSSVTP 12 0 1 2 Phospho (STY) _RVS(ph)PLNLSSVT(ph)P_ RVS(0.947)PLNLS(0.188)S(0.13)VT(0.734)P RVS(11.64)PLNLS(-6.9)S(-7.4)VT(6.9)P 0 0 2 1 Q9UJX2 Q9UJX2 Q9UJX2 CDC23 Cell division cycle protein 23 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 720.3331 2 715.328032 1428.64151 74134.31 0.94903 0.00067887 0.37393 0.00026748 1.323 0.00094635 715.328248034738 720.332455144989 112.65 0.86305 112.65 112.23 113.09 -7.6294E-06 266 81 5 0 0 0 0.0034996 1 66611 46.408 36.993 6 0.91623 1.129 0 32046000 14263000 17783000 4963 1233 2560 2828 8094 8094 2518;2999 RVTIMPK 7 1 1 Oxidation (M) _RVTIM(ox)PK_ RVTIM(1)PK RVTIM(79.31)PK 0 1 0 1 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;Q6NXT2;A8K4Y7;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 430.7544 2 430.754756 859.494958 91137.3 -0.0019234 -8.2853E-07 -0.58837 -0.00025344 -0.59029 -0.00025427 430.754559723417 439.765734614625 74.635 3.8147 74.635 73.187 77.002 0 1355 331 5 0 0 0 0.0058013 2 38010 79.307 24.736 1 1.0194 1.2764 0 3826700000 1794700000 2032000000 4964 527;1108 2561 2829 8095;8096 8095 137 RVTIMPK 7 1 1 Oxidation (M) _RVTIM(ox)PK_ RVTIM(1)PK RVTIM(53.75)PK 0 1 0 1 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;Q6NXT2;A8K4Y7;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 430.7548 2 430.754756 859.494958 91315.88 0.046133 1.9872E-05 -8.9222E-05 -3.8433E-08 0.046044 1.9834E-05 430.754658073257 439.765896220695 18.369 0.43678 18.369 18.129 18.566 0 90 19 7 0 0 0 0.011125 1 5370 53.754 18.505 1 0.64554 0.4977 0 47809000 28490000 19320000 4965 527;1108 2561 2829 8097 8097 137 RVYLSDSDNNSLETGEILK 19 1 1 2 Phospho (STY) _RVYLS(ph)DS(ph)DNNSLETGEILK_ RVY(0.016)LS(0.979)DS(0.795)DNNS(0.204)LET(0.006)GEILK RVY(-18.09)LS(18.09)DS(5.99)DNNS(-5.99)LET(-21.53)GEILK 0 0 2 1 Q9NSI6 Q9NSI6 Q9NSI6 BRWD1 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1157.5089 2 1157.006 2311.99745 55834.98 0.24559 0.00028415 1.1423 0.0013216 1.3878 0.0016057 1157.51057948632 1166.01734151021 111.03 0.72462 111.03 110.64 111.36 -7.6294E-06 385 63 9 0 0 0 1.2529E-10 1 65554 78.486 46.424 10 0.66007 0.78316 0 61058000 35582000 25476000 4966 1218 2562 2830 8098 8098 2462;2463 RYEDDGISDDEIEGK 15 1 1 Phospho (STY) _RYEDDGIS(ph)DDEIEGK_ RYEDDGIS(1)DDEIEGK RY(-36.91)EDDGIS(36.91)DDEIEGK 0 0 1 1 I3VM54;I3VM53;Q9Y2K7 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 919.876 2 910.864743 1819.71493 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.713 1 74.713 74.213 75.213 0 0 0 0 2.5641E-06 1 38313 65.716 48.647 2 4967 888 2563 2831 8099 8099 1500 RYEDQELTGK 10 1 1 Unmodified _RYEDQELTGK_ 0 0 0 1 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 628.8154 2 619.804217 1237.59388 NaN NaN NaN -0.23443 -0.0001453 NaN NaN NaN NaN 73.478 1.273 73.478 72.762 74.035 0 0 0 0 2.2461E-85 4 37454 169.58 114.01 1 NaN NaN 0 100900000 0 100900000 4968 1232 2564 2832 8100;8101;8102;8103 8103 RYEDQELTGK 10 1 1 Unmodified _RYEDQELTGK_ 0 0 0 1 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 628.8152 2 619.804217 1237.59388 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.725 1 72.725 72.225 73.225 7.6294E-06 0 0 0 0.007941 1 36890 70.028 31.725 1 4969 1232 2564 2832 8104 8104 RYEDQELTGK 10 1 1 Unmodified _RYEDQELTGK_ 0 0 0 1 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 628.8155 2 619.804217 1237.59388 NaN NaN NaN -0.40875 -0.00025334 NaN NaN NaN NaN 20.266 0.27387 20.266 20.153 20.426 1.9073E-06 0 0 0 0.027886 1 7194 42.395 15.066 1 NaN NaN 0 4071500 0 4071500 4970 1232 2564 2832 8105 8105 RYPSSISSSPQK 12 1 1 Phospho (STY) _RYPSSISSS(ph)PQK_ RYPSSIS(0.001)S(0.003)S(0.996)PQK RY(-96.23)PS(-48.93)S(-40.57)IS(-32.14)S(-24.65)S(24.65)PQK 0 0 1 1 B4DZJ6;B4DYY5;F8W726;Q14157 B4DZJ6 B4DZJ6 UBAP2L Ubiquitin-associated protein 2-like MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 708.8299 2 708.829581 1415.64461 72028.07 0.91823 0.00065087 -0.089468 -6.3417E-05 0.82877 0.00058745 708.829753764225 717.840197361016 25.355 0.69792 25.355 24.92 25.617 0 179 36 10 0 0 0 5.3005E-14 2 11550 111.38 77.694 6 0.93634 0.72337 0 156870000 82390000 74483000 4971 671 2565 2833 8106;8107 8107 1115 RYSPDELR 8 0 2 Phospho (STY) _RYS(ph)PDELR_ RY(0.001)S(0.999)PDELR RY(-32.91)S(32.91)PDELR 0 0 1 1 B4DK20;S5FQ49;S5FZ81;S5FMB0;Q8WUB8 B4DK20 B4DK20 PHF10 PHD finger protein 10 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 568.2565 2 558.247695 1114.48084 81059.14 0.79348 0.00044296 -0.20182 -0.00011267 0.59166 0.00033029 558.247391817478 568.255871946373 34.172 0.65879 34.172 33.863 34.522 0 208 54 5 0 0 0 0.0033681 1 18867 68.355 48.594 2 1.1284 0.97343 0 22484000 10130000 12354000 4972 629 2566 2834 8108 8108 1038 RYSPPIQR 8 0 2 Phospho (STY) _RYS(ph)PPIQR_ RYS(1)PPIQR RY(-60.09)S(60.09)PPIQR 0 0 1 1 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3;E9PCT1;M0R088 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 558.7788 2 548.768598 1095.52264 80977.45 0.58972 0.00032362 0.77617 0.00042594 1.3659 0.00074956 548.768759198452 558.777448360859 62.922 1.0816 62.922 62.23 63.312 0 414 90 7 0 0 0 0.001134 2 29268 97.813 60.257 2 0.93776 1.1705 0 191900000 106650000 85252000 4973 353 2567 2835 8109;8110 8109 556 RYWEEETVPTTAGASPGPPR 20 0 2 Phospho (STY) _RYWEEETVPTTAGAS(ph)PGPPR_ RYWEEETVPT(0.018)T(0.064)AGAS(0.918)PGPPR RY(-39.21)WEEET(-36.14)VPT(-16.97)T(-11.59)AGAS(11.59)PGPPR 0 0 1 1 B0UZZ8;A8K9A1;A8K806;O15213 B0UZZ8 B0UZZ8 C6orf11;WDR46 WD repeat-containing protein 46 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 761.3503 3 761.014352 2280.02123 NaN NaN NaN -0.93369 -0.00071055 NaN NaN NaN NaN 96.279 0.38532 96.279 96.064 96.449 0 0 0 0 0.00046223 1 54194 42.172 32.25 5 NaN NaN 0 11660000 11660000 0 4974 491 2568 2836 8111 8111 845 SAADSISESVPVGPK 15 1 0 Phospho (STY) _SAADS(ph)ISESVPVGPK_ SAADS(0.998)IS(0.002)ESVPVGPK S(-39.63)AADS(27.28)IS(-27.28)ES(-38.47)VPVGPK 0 0 1 0 A0A140VJZ1;P45974 A0A140VJZ1 A0A140VJZ1 USP5 Ubiquitin carboxyl-terminal hydrolase 5 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 766.3593 2 762.353086 1522.69162 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.364 1 83.364 82.864 83.864 7.6294E-06 0 0 0 9.8699E-08 1 44729 72.898 58.207 4 4975 380 2569 2837 8112 8112 598 SADFNPDFVFTEK 13 1 0 Phospho (STY) _S(ph)ADFNPDFVFTEK_ S(1)ADFNPDFVFTEK S(92.13)ADFNPDFVFT(-92.13)EK 0 0 1 0 B3GQE6;B7Z6D5;Q96GQ7;A0A087WYH5 B3GQE6 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 803.3436 2 798.834529 1595.6545 68669.07 0.85379 0.00068204 -0.11152 -8.9085E-05 0.74227 0.00059295 798.834344899418 802.841428401197 121.79 0.787 121.79 121.46 122.25 0 312 58 7 0 0 0 1.5055E-06 3 73614 96.464 83.508 2 0.42645 0.54113 0 38521000 27051000 11470000 4976 566 2570 2838 8113;8114;8115 8115 945 SAEFEKPDPTR 11 1 1 Phospho (STY) _S(ph)AEFEKPDPTR_ S(1)AEFEKPDPTR S(52.58)AEFEKPDPT(-52.58)R 0 0 1 1 A0A087WYV3;B4DYA9;A0A0D9SEW3;A0A087WXF8;Q9NP64 A0A087WYV3 A0A087WYV3 ZCCHC17 Nucleolar protein of 40 kDa MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 678.7963 2 678.795207 1355.57586 NaN NaN NaN NaN NaN NaN NaN NaN NaN 56.632 1 56.632 56.132 57.132 0 0 0 0 0.0031182 1 24621 53.967 39.709 2 4977 263 2571 2839 8116 8116 422 SAESPSWTPAEHVAK 15 1 0 Phospho (STY) _SAES(ph)PSWTPAEHVAK_ S(0.47)AES(0.523)PS(0.007)WT(0.001)PAEHVAK S(-0.46)AES(0.46)PS(-18.85)WT(-29.41)PAEHVAK 0 0 1 0 B7Z8H0;Q96F82;A8K794;Q13415 B7Z8H0 B7Z8H0 ORC1L;ORC1 Origin recognition complex subunit 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 838.8708 2 838.869434 1675.72432 69243.9 0.80885 0.00067852 0.47494 0.00039841 1.2838 0.0010769 838.870072876823 842.876883721308 75.118 0.2448 75.118 74.971 75.216 0 49 21 5 0 0 0 0.0025316 1 38598 41.838 30.398 4 1.1904 1.4255 0 14106000 5331500 8774300 4978 487 2572 2840 8117 8117 841 SAESPSWTPAEHVAK 15 1 0 Phospho (STY) _SAES(ph)PSWTPAEHVAK_ S(0.019)AES(0.978)PS(0.003)WTPAEHVAK S(-17.08)AES(17.08)PS(-25.45)WT(-48.23)PAEHVAK 0 0 1 0 B7Z8H0;Q96F82;A8K794;Q13415 B7Z8H0 B7Z8H0 ORC1L;ORC1 Origin recognition complex subunit 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 842.8781 2 838.869434 1675.72432 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.879 1 74.879 74.379 75.379 0 0 0 0 1.422E-07 1 38423 72.417 53.342 4 4979 487 2572 2840 8118 8118 841 SAESPSWTPAEHVAK 15 1 0 Phospho (STY) _SAES(ph)PSWTPAEHVAK_ S(0.053)AES(0.943)PS(0.004)WTPAEHVAK S(-12.48)AES(12.48)PS(-24.26)WT(-46.35)PAEHVAK 0 0 1 0 B7Z8H0;Q96F82;A8K794;Q13415 B7Z8H0 B7Z8H0 ORC1L;ORC1 Origin recognition complex subunit 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 842.8777 2 838.869434 1675.72432 66833.96 0.97509 0.00081797 0.61285 0.0005141 1.5879 0.0013321 838.870381726312 842.876340823803 63.222 2.6958 63.222 61.508 64.204 3.8147E-06 801 247 6 0 0 0 0.0010085 1 39294 63.29 63.29 4 0.78876 0.5297 0 26996000 14168000 12828000 4980 487 2572 2840 8119 8119 841 SAGAPASVSGQDADGSTSPR 20 0 1 Phospho (STY) _SAGAPASVSGQDADGS(ph)TSPR_ SAGAPASVS(0.006)GQDADGS(0.331)T(0.331)S(0.331)PR S(-52.7)AGAPAS(-33.22)VS(-17.21)GQDADGS(0)T(0)S(0)PR 0 0 1 0 Q16176;K7EQY5;F1T0G6;B2RDR6;P42679 Q16176 Q16176 lsk;MATK Non-specific protein-tyrosine kinase;Megakaryocyte-associated tyrosine-protein kinase MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 954.405 2 949.399816 1896.78508 65716.27 0.7378 0.00070046 0.35158 0.00033379 1.0894 0.0010343 949.400073026382 954.404227246687 41.533 0.72194 41.533 41.153 41.875 0 303 62 7 0 0 0 5.6416E-07 1 14740 55.267 49.104 6 0.7044 0.76627 0 4200800 2481000 1719800 4981 557 2573 2841 8120 8120 922;923;2765 SAGEEEDGPVLTDEQK 16 1 0 Phospho (STY) _S(ph)AGEEEDGPVLTDEQK_ S(1)AGEEEDGPVLTDEQK S(85.25)AGEEEDGPVLT(-85.25)DEQK 0 0 1 0 F5GYV5;H7BZV4;B2RE15;A0A0C4DG62;F8WCT1;F5H7X4;Q8TEM4;Q66PJ3 F5GYV5 F5GYV5 ARL6IP4;FLJ00169 ADP-ribosylation factor-like protein 6-interacting protein 4 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 896.377 2 892.367118 1782.71968 NaN NaN NaN 0.21427 0.00019121 NaN NaN NaN NaN 61.372 0.55297 61.372 60.965 61.518 0 0 0 0 1.1829E-15 2 28163 103.39 84.715 2 NaN NaN 0 10588000 0 10588000 4982 318 2574 2842 8121;8122 8122 501 SAIDLTPIVVEDK 13 1 0 Phospho (STY) _SAIDLT(ph)PIVVEDK_ SAIDLT(1)PIVVEDK S(-93.74)AIDLT(93.74)PIVVEDK 0 0 1 0 B3KY63;F5GWX5;A0A0C4DGG9;Q14839 B3KY63 B3KY63 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 744.3793 2 740.370747 1478.72694 71207.77 1.0328 0.00076467 -0.18246 -0.00013509 0.85035 0.00062958 740.370526280582 744.377626695603 117.81 0.87544 117.81 117.45 118.33 0 458 76 9 0 0 0 3.4738E-19 2 70470 131.35 120.59 2 0.5224 0.64815 0 112410000 72221000 40188000 4983 324 2575 2843 8123;8124 8124 511;2689 SAIDLTPIVVEDK 13 1 0 Phospho (STY) _SAIDLT(ph)PIVVEDK_ SAIDLT(1)PIVVEDK S(-56.47)AIDLT(56.47)PIVVEDK 0 0 1 0 B3KY63;F5GWX5;A0A0C4DGG9;Q14839 B3KY63 B3KY63 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 744.3792 2 740.370747 1478.72694 71005.9 1.0606 0.00078526 0.024866 1.841E-05 1.0855 0.00080367 740.370783337262 744.377818704708 125.67 0.73309 125.67 125.3 126.04 0 417 67 9 0 0 0 0.0099541 2 81044 71.344 61.657 2 1.5967 1.0533 0 61820000 24651000 37169000 4984 324 2575 2843 8125;8126 8125 511;2689 SAIDLTPIVVEDK 13 1 0 2 Phospho (STY) _S(ph)AIDLT(ph)PIVVEDK_ S(1)AIDLT(1)PIVVEDK S(78.69)AIDLT(78.69)PIVVEDK 0 0 2 0 B3KY63;F5GWX5;A0A0C4DGG9;Q14839 B3KY63 B3KY63 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 780.3553 2 780.353912 1558.69327 70377.95 0.87613 0.00068369 0.12646 9.8681E-05 1.0026 0.00078237 780.354081678817 784.360800405871 123.95 0.56317 123.95 123.68 124.25 0 158 49 5 0 0 0 0.00031058 1 75008 78.69 78.69 1 0.34706 0.41165 0 9116600 6093300 3023300 4985 324 2575 2844 8127 8127 511;2689 SAIDLTPIVVEDK 13 1 0 2 Phospho (STY) _S(ph)AIDLT(ph)PIVVEDK_ S(1)AIDLT(1)PIVVEDK S(41.97)AIDLT(41.97)PIVVEDK 0 0 2 0 B3KY63;F5GWX5;A0A0C4DGG9;Q14839 B3KY63 B3KY63 CHD4 Chromodomain-helicase-DNA-binding protein 4 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 784.3619 2 780.353912 1558.69327 NaN NaN NaN 0.19201 0.00014983 NaN NaN NaN NaN 123.86 0.094765 123.86 123.8 123.9 0 0 0 0 0.0052335 1 75041 41.967 23.221 1 NaN NaN 0 2204500 0 2204500 4986 324 2575 2844 8128 8128 511;2689 SALNLNQPVSVSSVSPVK 18 1 0 Phospho (STY) _SALNLNQPVSVSSVS(ph)PVK_ SALNLNQPVS(0.012)VS(0.059)S(0.304)VS(0.625)PVK S(-78.48)ALNLNQPVS(-17.22)VS(-10.22)S(-3.13)VS(3.13)PVK 0 0 1 0 H0YIT6;G3V1N3;B3KTH9;A0A024RBF4;Q86XJ1 H0YIT6 H0YIT6 GAS2L3 GAS2-like protein 3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 957.4963 2 953.487705 1904.96086 NaN NaN NaN NaN NaN NaN NaN NaN NaN 106.71 1 106.71 106.21 107.21 0 0 0 0 6.3574E-08 1 62154 80.312 45.78 5 4987 197 2576 2845 8129 8129 310 SANNTPENSPNFPNFR 16 0 1 Phospho (STY) _SANNTPENS(ph)PNFPNFR_ SANNT(0.009)PENS(0.991)PNFPNFR S(-37.03)ANNT(-20.63)PENS(20.63)PNFPNFR 0 0 1 0 B3KND8;D3DS96;Q9NRL2;Q59G54 B3KND8 B3KND8 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 948.4048 2 943.396879 1884.7792 NaN NaN NaN 0.60811 0.00057369 NaN NaN NaN NaN 89.854 0.70364 89.854 89.603 90.306 0 0 0 0 1.5032E-06 2 49199 60.255 39.478 3 NaN NaN 0 16219000 0 16219000 4988 582 2577 2846 8130;8131 8130 966;2770 SANNTPENSPNFPNFR 16 0 1 2 Phospho (STY) _SANNT(ph)PENS(ph)PNFPNFR_ S(0.001)ANNT(0.999)PENS(1)PNFPNFR S(-30.23)ANNT(30.23)PENS(59.77)PNFPNFR 0 0 2 0 B3KND8;D3DS96;Q9NRL2;Q59G54 B3KND8 B3KND8 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 988.3848 2 983.380044 1964.74554 NaN NaN NaN -0.3632 -0.00035717 NaN NaN NaN NaN 96.095 1.2515 96.095 95.474 96.725 7.6294E-06 0 0 0 2.8102E-30 1 54003 115.87 87.898 3 NaN NaN 0 63073000 0 63073000 4989 582 2577 2847 8132 8132 966;2770 SAPDTQERPPVR 12 0 2 Phospho (STY) _S(ph)APDTQERPPVR_ S(0.95)APDT(0.05)QERPPVR S(12.79)APDT(-12.79)QERPPVR 0 0 1 1 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 726.8413 2 716.832655 1431.65076 71157.64 0.79706 0.00057136 0.045014 3.2268E-05 0.84208 0.00060363 716.832775126735 726.840874635697 49.004 1.2579 49.004 48.362 49.62 3.8147E-06 508 92 7 0 0 0 0.014074 1 19080 40.475 22.339 2 2.433 3.0285 0 98192000 29854000 68338000 4990 1154 2578 2848 8133 8133 2226;2962 SAPDTQERPPVR 12 0 2 Phospho (STY) _S(ph)APDTQERPPVR_ S(0.991)APDT(0.009)QERPPVR S(20.63)APDT(-20.63)QERPPVR 0 0 1 1 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 484.8966 3 478.224195 1431.65076 87208.7 0.4017 0.0001921 -0.14017 -6.7034E-05 0.26152 0.00012507 478.224073680067 484.896271451501 48.974 1.3502 48.974 48.317 49.667 0 492 99 8 0 0 0 0.0022743 2 19400 64.439 46.63 2 2.1798 2.7058 0 50775000 16573000 34203000 4991 1154 2578 2848 8134;8135 8135 2226;2962 SAPDTQERPPVR 12 0 2 Phospho (STY) _SAPDT(ph)QERPPVR_ SAPDT(1)QERPPVR S(-46.4)APDT(46.4)QERPPVR 0 0 1 1 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 484.8962 3 478.224195 1431.65076 88370.31 0.028539 1.3648E-05 0.22519 0.00010769 0.25373 0.00012134 478.224293969358 484.896492040504 23.735 0.63386 23.735 23.362 23.996 0 163 36 7 0 0 0 0.00066889 1 10148 74.678 48.137 2 2.2057 1.9087 0 32899000 11859000 21040000 4992 1154 2578 2848 8136 8136 2226;2962 SAPTAPTPPPPPPPATPR 18 0 1 Phospho (STY) _SAPTAPT(ph)PPPPPPPATPR_ S(0.001)APT(0.012)APT(0.983)PPPPPPPAT(0.004)PR S(-28.23)APT(-19.19)APT(19.19)PPPPPPPAT(-24.42)PR 0 0 1 0 A6NHN7;A6NHB5;Q14202 A6NHN7 A6NHN7 ZMYM3 Zinc finger MYM-type protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 915.4568 2 914.953301 1827.89205 65294.6 0.48724 0.0004458 0.32892 0.00030095 0.81616 0.00074675 914.953693831594 919.957680370133 74.239 0.96922 74.239 73.815 74.784 0 230 82 5 0 0 0 0.00085804 1 38200 48.467 41.585 4 0.47056 0.5787 0 26482000 17778000 8703300 4993 426 2579 2849 8137 8137 2725 SAPTAPTPPPPPPPATPR 18 0 1 Phospho (STY) _SAPTAPT(ph)PPPPPPPATPR_ S(0.006)APT(0.023)APT(0.971)PPPPPPPATPR S(-22.31)APT(-16.23)APT(16.23)PPPPPPPAT(-33.71)PR 0 0 1 0 A6NHN7;A6NHB5;Q14202 A6NHN7 A6NHN7 ZMYM3 Zinc finger MYM-type protein 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 919.9584 2 914.953301 1827.89205 65419.38 1.0802 0.00098837 -0.14723 -0.00013471 0.93301 0.00085366 914.953354658206 920.458700480596 76.421 0.91714 76.421 75.997 76.914 -7.6294E-06 362 85 6 0 0 0 0.00096337 2 48630 47.754 47.754 4 1.4273 1.0796 0 19635000 7228700 12406000 4994 426 2579 2849 8138;8139 8138 2725 SAQWLDQEEAPK 12 1 0 Phospho (STY) _S(ph)AQWLDQEEAPK_ S(1)AQWLDQEEAPK S(110.38)AQWLDQEEAPK 0 0 1 0 B4DND2;Q96H41;Q53H47 B4DND2 B4DND2 SETMAR Histone-lysine N-methyltransferase SETMAR;Histone-lysine N-methyltransferase;Transposon Hsmar1 transposase MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 741.3204 2 741.319046 1480.62354 74075.69 0.96918 0.00071847 0.32207 0.00023876 1.2912 0.00095723 741.319501297797 745.326102817987 80.848 0.99122 80.848 80.362 81.353 7.6294E-06 213 90 4 0 0 0 1.3924E-13 2 43116 110.38 91.784 1 0.48203 0.59221 0 22009000 13098000 8911100 4995 645 2580 2850 8140;8141 8141 1072 SASAPAAEGEGTPTQPASEK 20 1 0 Phospho (STY) _SASAPAAEGEGT(ph)PTQPASEK_ SASAPAAEGEGT(0.942)PT(0.054)QPAS(0.004)EK S(-69.15)AS(-64.72)APAAEGEGT(12.4)PT(-12.4)QPAS(-23.55)EK 0 0 1 0 B4DFG0;P35659 B4DFG0 B4DFG0 DEK Protein DEK MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 987.4338 2 983.425499 1964.83645 62151 0.49505 0.00048684 0.41674 0.00040983 0.91178 0.00089667 983.42594752276 987.433005448934 39.607 1.4477 39.607 39.102 40.55 -3.8147E-06 861 130 11 0 0 0 3.6519E-13 1 13660 88.574 82.85 5 0.61021 0.76991 0 48103000 31169000 16934000 4996 619 2581 2851 8142 8142 2785 SASAPAAEGEGTPTQPASEK 20 1 0 Phospho (STY) _SASAPAAEGEGT(ph)PTQPASEK_ S(0.001)AS(0.002)APAAEGEGT(0.947)PT(0.04)QPAS(0.009)EK S(-29.35)AS(-27.17)APAAEGEGT(13.72)PT(-13.72)QPAS(-20.08)EK 0 0 1 0 B4DFG0;P35659 B4DFG0 B4DFG0 DEK Protein DEK MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 656.287 3 655.952758 1964.83645 74639.11 0.95593 0.00062704 0.4031 0.00026442 1.359 0.00089146 655.952836841322 658.624384182637 19.173 0.31404 19.173 19.048 19.362 -1.9073E-06 47 11 7 0 0 0 1.724E-05 1 6203 45.099 35.519 5 0.99087 0.76102 0 12108000 6632100 5476000 4997 619 2581 2851 8143 8143 2785 SASAPAAEGEGTPTQPASEK 20 1 0 Phospho (STY) _SASAPAAEGEGT(ph)PTQPASEK_ S(0.001)AS(0.001)APAAEGEGT(0.953)PT(0.045)QPAS(0.001)EK S(-31.89)AS(-32.37)APAAEGEGT(13.22)PT(-13.22)QPAS(-30.25)EK 0 0 1 0 B4DFG0;P35659 B4DFG0 B4DFG0 DEK Protein DEK MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 983.9275 2 983.425499 1964.83645 58983.99 0.2149 0.00021133 -0.17544 -0.00017253 0.03946 3.8806E-05 983.426157214548 987.43317237869 20.928 0.4129 20.928 20.801 21.214 0 100 20 8 0 0 0 1.2435E-07 2 7741 68.481 59.751 5 0.8616 0.66149 0 16801000 9665000 7135500 4998 619 2581 2851 8144;8145 8145 2785 SASAPAAEGEGTPTQPASEK 20 1 0 Phospho (STY) _SASAPAAEGEGT(ph)PTQPASEK_ SASAPAAEGEGT(0.993)PT(0.007)QPASEK S(-105.52)AS(-99.16)APAAEGEGT(21.33)PT(-21.33)QPAS(-44.74)EK 0 0 1 0 B4DFG0;P35659 B4DFG0 B4DFG0 DEK Protein DEK MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 987.4337 2 983.425499 1964.83645 62128.71 0.42899 0.00042188 0.46385 0.00045617 0.89285 0.00087805 983.927438370903 987.433083348384 29.509 1.3938 29.509 29.145 30.538 1.9073E-06 814 99 13 0 0 0 2.5427E-54 1 15041 145.71 145.71 5 0.84347 0.56205 0 1035500000 572370000 463150000 4999 619 2581 2851 8146 8146 2785 SASAPAAEGEGTPTQPASEK 20 1 0 Acetyl (Protein N-term),Phospho (STY) _(ac)SASAPAAEGEGT(ph)PTQPASEK_ SASAPAAEGEGT(0.746)PT(0.251)QPAS(0.003)EK S(-33.31)AS(-33.31)APAAEGEGT(4.73)PT(-4.73)QPAS(-24.63)EK 1 0 1 0 B4DFG0;P35659 B4DFG0 B4DFG0 DEK Protein DEK MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1004.4315 2 1004.43078 2006.84701 60558.25 0.38177 0.00038346 0.21177 0.00021271 0.59354 0.00059617 1004.43116128518 1008.4382663245 42.321 2.422 42.321 41.644 44.066 0 1089 182 12 0 0 0 2.2064E-10 2 15415 76.573 70.54 5 0.61905 0.76671 0 161660000 99549000 62115000 5000 619 2581 2852 8147;8148 8148 2785 SASAPAAEGEGTPTQPASEK 20 1 0 Acetyl (Protein N-term),Phospho (STY) _(ac)SASAPAAEGEGT(ph)PTQPASEK_ SASAPAAEGEGT(0.808)PT(0.19)QPAS(0.002)EK S(-46.67)AS(-42.08)APAAEGEGT(6.28)PT(-6.28)QPAS(-26.3)EK 1 0 1 0 B4DFG0;P35659 B4DFG0 B4DFG0 DEK Protein DEK MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1004.9272 2 1004.43078 2006.84701 59251.06 0.35853 0.00036012 -2.8287 -0.0028412 -2.4702 -0.0024811 1004.93006271336 1008.93678110694 44.952 1.1786 44.952 44.229 45.407 0 568 86 10 0 0 0 1.373E-08 1 16865 67.519 61.486 5 0.5798 0.72322 0 25899000 17078000 8820500 5001 619 2581 2852 8149 8149 2785 SASAPAAEGEGTPTQPASEK 20 1 0 Acetyl (Protein N-term),Phospho (STY) _(ac)SASAPAAEGEGT(ph)PTQPASEK_ SASAPAAEGEGT(0.926)PT(0.071)QPAS(0.003)EK S(-50.71)AS(-50.71)APAAEGEGT(11.16)PT(-11.16)QPAS(-25.01)EK 1 0 1 0 B4DFG0;P35659 B4DFG0 B4DFG0 DEK Protein DEK MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1008.9393 2 1004.43078 2006.84701 58984.02 0.39535 0.0003971 -0.73571 -0.00073897 -0.34036 -0.00034187 1004.93157728151 1008.43701777646 45.611 1.0204 45.611 45.245 46.265 0 441 74 9 0 0 0 1.9605E-10 1 17010 77.185 77.185 5 0.55504 0.6975 0 28526000 17812000 10714000 5002 619 2581 2852 8150 8150 2785 SASAPAAEGEGTPTQPASEK 20 1 0 Acetyl (Protein N-term),Phospho (STY) _(ac)SASAPAAEGEGT(ph)PTQPASEK_ SASAPAAEGEGT(0.897)PT(0.103)QPASEK S(-138.21)AS(-131.84)APAAEGEGT(9.41)PT(-9.41)QPAS(-48.31)EK 1 0 1 0 B4DFG0;P35659 B4DFG0 B4DFG0 DEK Protein DEK MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1004.4315 2 1004.43078 2006.84701 59930.86 0.50435 0.00050658 0.063693 6.3975E-05 0.56804 0.00057056 1004.43139742119 1008.43791968891 47.833 3.5944 47.833 46.231 49.826 3.8147E-06 1716 260 13 0 0 0 8.732E-100 6 18675 183.6 172.07 5 0.61778 0.76139 0 1537000000 940840000 596120000 5003 619 2581 2852 8151;8152;8153;8154;8155;8156 8153 2785 SASAPAAEGEGTPTQPASEK 20 1 0 Acetyl (Protein N-term),Phospho (STY) _(ac)SASAPAAEGEGT(ph)PTQPASEK_ SASAPAAEGEGT(0.81)PT(0.179)QPAS(0.01)EK S(-34.44)AS(-34.44)APAAEGEGT(6.54)PT(-6.54)QPAS(-19.03)EK 1 0 1 0 B4DFG0;P35659 B4DFG0 B4DFG0 DEK Protein DEK MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1004.4315 2 1004.43078 2006.84701 60599.7 0.41272 0.00041455 0.33563 0.00033712 0.74835 0.00075167 1004.43137294631 1008.43825715163 33.341 1.5137 33.341 32.931 34.445 0 894 120 12 0 0 0 2.9069E-07 2 18521 57.482 52.784 5 0.84463 0.56309 0 782440000 430530000 351910000 5004 619 2581 2852 8157;8158 8158 2785 SASAPAAEGEGTPTQPASEK 20 1 0 Acetyl (Protein N-term),Phospho (STY) _(ac)SASAPAAEGEGT(ph)PTQPASEK_ SASAPAAEGEGT(0.976)PT(0.024)QPASEK S(-77.41)AS(-70.92)APAAEGEGT(16.03)PT(-16.03)QPAS(-38.64)EK 1 0 1 0 B4DFG0;P35659 B4DFG0 B4DFG0 DEK Protein DEK MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1008.9312 2 1004.43078 2006.84701 58360.19 0.15971 0.00016042 -3.2405 -0.0032549 -3.0808 -0.0030944 1004.92884529336 1008.93534118034 36.933 1.0308 36.933 36.468 37.499 3.8147E-06 788 88 12 0 0 0 1.999E-37 2 21127 126.83 126.83 5 0.86425 0.57739 0 215220000 115810000 99402000 5005 619 2581 2852 8159;8160 8160 2785 SASAPAAEGEGTPTQPASEK 20 1 0 Acetyl (Protein N-term),Phospho (STY) _(ac)SASAPAAEGEGT(ph)PTQPASEK_ SASAPAAEGEGT(0.978)PT(0.022)QPASEK S(-195.25)AS(-189.85)APAAEGEGT(16.54)PT(-16.54)QPAS(-55.87)EK 1 0 1 0 B4DFG0;P35659 B4DFG0 B4DFG0 DEK Protein DEK MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1008.9396 2 1004.43078 2006.84701 60603.14 0.48398 0.00048612 0.45591 0.00045793 0.93989 0.00094406 1004.43178105348 1008.43821494328 51.706 1.7173 51.706 51.239 52.956 0 1305 156 12 0 0 0 2.2142E-235 4 31149 243.29 227.32 5 0.81613 0.54329 0 1895500000 1051900000 843520000 5006 619 2581 2852 8161;8162;8163;8164 8161 2785 SASLSPAAATHQSQIYGR 18 0 1 Phospho (STY) _SASLS(ph)PAAATHQSQIYGR_ SAS(0.005)LS(0.994)PAAAT(0.001)HQSQIYGR S(-49.13)AS(-22.84)LS(22.84)PAAAT(-31.8)HQS(-45.49)QIY(-63.38)GR 0 0 1 0 B2RWN8;Q8WYB5;A7E2B6 B2RWN8 B2RWN8 MYST4;KAT6B Histone acetyltransferase;Histone acetyltransferase KAT6B ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 645.6394 3 642.301945 1923.884 NaN NaN NaN 0.39256 0.00025214 NaN NaN NaN NaN 70.397 0.65457 70.397 70.037 70.691 7.6294E-06 0 0 0 3.4334E-08 1 44293 76.807 50.18 6 NaN NaN 0 12773000 0 12773000 5007 564 2582 2853 8165 8165 930 SASPSVPGPTK 11 1 0 Phospho (STY) _SAS(ph)PSVPGPTK_ S(0.084)AS(0.914)PS(0.003)VPGPTK S(-10.38)AS(10.38)PS(-25.48)VPGPT(-39.75)K 0 0 1 0 Q03164;B4E012 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 554.258 2 554.257729 1106.5009 84138.95 0.63327 0.000351 0.0019569 1.0846E-06 0.63523 0.00035208 554.257649665785 558.264836440922 44.625 0.76366 44.625 44.173 44.937 0 147 56 5 0 0 0 0.012204 1 16510 48.948 43.206 4 0.65547 0.76517 0 3103000 1916300 1186800 5008 1034 2583 2854 8166 8166 1893;1894;1895 SASPSVPGPTKPK 13 2 0 Phospho (STY) _SAS(ph)PSVPGPTKPK_ S(0.001)AS(0.992)PS(0.007)VPGPTKPK S(-29.86)AS(21.57)PS(-21.57)VPGPT(-60.33)KPK 0 0 1 1 Q03164;B4E012 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 666.8323 2 666.831592 1331.64863 74364.01 0.91503 0.00061017 0.37282 0.00024861 1.2878 0.00085877 666.831876625152 674.846006679225 26.817 0.66703 26.817 26.554 27.221 0 239 38 10 0 0 0 0.00010246 2 12784 84.753 84.753 4 1.8072 1.3351 0 254060000 90828000 163230000 5009 1034 2584 2855 8167;8168 8167 1893;1894;1895 SASPSVPGPTKPK 13 2 0 Phospho (STY) _SASPS(ph)VPGPTKPK_ S(0.007)AS(0.459)PS(0.533)VPGPTKPK S(-18.67)AS(-0.65)PS(0.65)VPGPT(-35.94)KPK 0 0 1 1 Q03164;B4E012 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 450.2333 3 444.890154 1331.64863 88552.78 0.18848 8.3852E-05 0.28979 0.00012893 0.47827 0.00021278 444.890279384466 450.233034540216 26.801 0.58305 26.801 26.554 27.137 -1.9073E-06 191 32 9 0 0 0 0.0027638 1 12864 43.592 43.592 4 1.7991 1.3487 0 85257000 32304000 52953000 5010 1034 2584 2855 8169 8169 1893;1894;1895 SASPSVPGPTKPK 13 2 0 2 Phospho (STY) _S(ph)AS(ph)PSVPGPTKPK_ S(0.996)AS(0.977)PS(0.027)VPGPTKPK S(24.5)AS(16.28)PS(-16.28)VPGPT(-36.78)KPK 0 0 2 1 Q03164;B4E012 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 706.8156 2 706.814758 1411.61496 75117.82 0.91956 0.00064996 0.36899 0.00026081 1.2885 0.00091077 706.814803976812 714.829237259756 36.234 0.75339 36.234 35.863 36.617 0 311 60 7 0 0 0 0.0048953 1 20471 42.242 37.629 6 2.5166 1.9737 0 36100000 10990000 25110000 5011 1034 2584 2856 8170 8170 1893;1894;1895 SASSNSAEAGGDTVTLDDILSLK 23 1 0 Phospho (STY) _S(ph)ASSNSAEAGGDTVTLDDILSLK_ S(0.31)AS(0.31)S(0.31)NS(0.069)AEAGGDTVTLDDILSLK S(0)AS(0)S(0)NS(-6.52)AEAGGDT(-76.11)VT(-82.26)LDDILS(-105.06)LK 0 0 1 0 W5ZR30;Q9UGU0 W5ZR30 W5ZR30 TCF20 Transcription factor 20 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1170.0396 2 1166.0336 2330.05265 57822.34 0.62399 0.0007276 -0.79631 -0.00092853 -0.17232 -0.00020093 1166.03307474334 1170.03989712788 133.52 0.27016 133.52 133.37 133.64 0 27 10 5 0 0 0 1.2531E-29 1 81324 105.06 98.942 7 0.87099 1.0967 0 29456000 13580000 15876000 5012 1227 2585 2857 8171 8171 2496;2497;2498 SAYPPPAPAYALSSPR 16 0 1 Phospho (STY) _SAYPPPAPAYALS(ph)SPR_ SAYPPPAPAY(0.027)ALS(0.556)S(0.417)PR S(-37.22)AY(-37.34)PPPAPAY(-13.14)ALS(1.25)S(-1.25)PR 0 0 1 0 A0A0S2Q0B1;O14497 A0A0S2Q0B1 A0A0S2Q0B1 ARID1A AT-rich interactive domain-containing protein 1A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 862.9066 2 862.90582 1723.79709 67483.22 0.96467 0.00083242 0.34215 0.00029524 1.3068 0.0011277 863.40750385989 867.910493473848 95.235 0.73056 95.235 94.897 95.628 7.6294E-06 183 64 5 0 0 0 0.00077063 1 53447 42.947 33.259 5 1.1282 1.3858 0 23015000 10345000 12670000 5013 344 2586 2858 8172 8172 541 SCDSPLNLK 9 1 0 Phospho (STY) _SCDS(ph)PLNLK_ SCDS(1)PLNLK S(-48.29)CDS(48.29)PLNLK 0 0 1 0 Q8N1G0 Q8N1G0 Q8N1G0 ZNF687 Zinc finger protein 687 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 561.2426 2 557.235939 1112.45733 80960.02 0.49205 0.00027419 -0.25047 -0.00013957 0.24158 0.00013462 557.235821418802 561.242762774419 69.367 1.3505 69.367 68.633 69.984 0 388 131 4 0 0 0 0.00027455 2 34201 84.687 54.92 2 0.69916 0.88307 0 46659000 26178000 20481000 5014 1150 2587 2859 8173;8174 8173 2221 SCDSPLNLK 9 1 0 Phospho (STY) _SCDS(ph)PLNLK_ SCDS(1)PLNLK S(-73.6)CDS(73.6)PLNLK 0 0 1 0 Q8N1G0 Q8N1G0 Q8N1G0 ZNF687 Zinc finger protein 687 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 561.2429 2 557.235939 1112.45733 79750.88 0.71242 0.00039699 -0.5615 -0.00031289 0.15092 8.41E-05 557.235996001253 561.242681640682 63.122 1.9107 63.122 62.38 64.291 0 879 175 7 0 0 0 4.8314E-05 2 39551 115 63.737 2 2.0903 1.3922 0 99504000 30481000 69022000 5015 1150 2587 2859 8175;8176 8176 2221 SCFESSPDPELK 12 1 0 Phospho (STY) _SCFESS(ph)PDPELK_ SCFES(0.415)S(0.585)PDPELK S(-58.31)CFES(-1.5)S(1.5)PDPELK 0 0 1 0 A0A140VK53;Q9UQ35;I3L4D8;I3L182;Q9UQ39 A0A140VK53 A0A140VK53 SRRM2 Serine/arginine repetitive matrix protein 2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 738.2919 2 738.29164 1474.56873 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.701 1 71.701 71.201 72.201 0 0 0 0 0.0001181 1 36069 67.997 45.799 3 5016 383 2588 2860 8177 8177 621 SCFESSPDPELK 12 1 0 Phospho (STY) _SCFESS(ph)PDPELK_ SCFES(0.29)S(0.71)PDPELK S(-51.05)CFES(-3.88)S(3.88)PDPELK 0 0 1 0 A0A140VK53;Q9UQ35;I3L4D8;I3L182;Q9UQ39 A0A140VK53 A0A140VK53 SRRM2 Serine/arginine repetitive matrix protein 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 742.3004 2 738.29164 1474.56873 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.75 1 71.75 71.25 72.25 0 0 0 0 0.00016025 1 36110 66.023 43.548 3 5017 383 2588 2860 8178 8178 621 SCINLPTVLPGSPSK 15 1 0 Acetyl (Protein N-term),Phospho (STY) _(ac)SCINLPTVLPGS(ph)PSK_ SCINLPTVLPGS(0.84)PS(0.16)K S(-100.77)CINLPT(-43.67)VLPGS(7.2)PS(-7.2)K 1 0 1 0 K7ENW5;K7ES52;K7ERJ1;B5BUF9;B5BU32;K7ERV3;P04183 K7ENW5 K7ENW5 TK1 Thymidine kinase;Thymidine kinase, cytosolic MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 846.4107 2 846.407338 1690.80012 67216.13 0.65382 0.00055339 0.18697 0.00015826 0.84079 0.00071165 846.407514501169 850.414619598753 131.17 0.63081 131.17 130.83 131.46 0 226 54 6 0 0 0 2.2789E-12 2 79726 106.14 91.982 4 0.8662 1.028 0 11083000 5649900 5432900 5018 689 2589 2861 8179;8180 8179 1135 SCSSPAVSAVSQLPLSPK 18 1 0 2 Phospho (STY) _SCSS(ph)PAVSAVSQLPLS(ph)PK_ S(0.225)CS(0.36)S(0.408)PAVS(0.008)AVS(0.042)QLPLS(0.957)PK S(-2.53)CS(-0.54)S(0.54)PAVS(-17.71)AVS(-13.29)QLPLS(13.29)PK 0 0 2 0 Q9Y2F5 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 991.9425 2 987.935806 1973.85706 62357.11 0.42937 0.00042419 0.68945 0.00068113 1.1188 0.0011053 987.936847547537 992.445686415657 114.1 0.41632 114.1 113.9 114.32 -7.6294E-06 145 35 7 0 0 0 0.00015988 1 67936 44.238 35.074 15 0.74841 0.89633 0 14163000 8411500 5752000 5019 1246 2590 2862 8181 8181 2558;2559 SCTPSPDQISHR 12 0 1 2 Phospho (STY) _SCT(ph)PS(ph)PDQISHR_ S(0.022)CT(0.978)PS(0.999)PDQIS(0.001)HR S(-16.51)CT(16.51)PS(31.04)PDQIS(-31.04)HR 0 0 2 0 A8K9U6;Q7Z2W4;C9J6P4 A8K9U6 A8K9U6 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 772.7841 2 772.783663 1543.55277 70067.44 0.77636 0.00059996 -0.35793 -0.0002766 0.41843 0.00032336 772.783506529756 777.787734983221 46.016 0.86339 46.016 45.555 46.418 0 306 63 7 0 0 0 0.0062267 1 17320 55.314 47.933 6 1.0236 1.1506 0 10369000 5650600 4718000 5020 505 2591 2863 8182 8182 866;2754 SCTPSPDQISHR 12 0 1 2 Phospho (STY) _SCT(ph)PS(ph)PDQISHR_ S(0.001)CT(0.999)PS(1)PDQISHR S(-28.42)CT(28.42)PS(45.17)PDQIS(-45.17)HR 0 0 2 0 A8K9U6;Q7Z2W4;C9J6P4 A8K9U6 A8K9U6 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 777.7891 2 772.783663 1543.55277 69593.84 1.0363 0.00080082 -0.082038 -6.3397E-05 0.95424 0.00073742 772.783665898408 777.787908867838 36.057 0.69786 36.057 35.729 36.427 0 333 56 8 0 0 0 8.8048E-05 1 20206 89.629 76.216 6 1.2066 0.8369 0 40568000 19185000 21383000 5021 505 2591 2863 8183 8183 866;2754 SDAEEDGGTVSQEEEDRKPK 20 2 1 Phospho (STY) _SDAEEDGGTVS(ph)QEEEDRKPK_ SDAEEDGGT(0.228)VS(0.772)QEEEDRKPK S(-68.46)DAEEDGGT(-5.29)VS(5.29)QEEEDRKPK 0 0 1 2 P27824 P27824 P27824 CANX Calnexin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 762.652 3 762.651696 2284.93326 70811.94 0.65025 0.00049592 0.57271 0.00043678 1.223 0.0009327 762.651728117544 771.665030575484 54.764 0.96148 54.764 54.186 55.148 0 368 75 8 0 0 0 1.5639E-09 1 23121 71.428 67.447 3 0.28177 0.33005 0 34080000 25633000 8447100 5022 979 2592 2864 8184 8184 1732;1733 SDAEEDGGTVSQEEEDRKPK 20 2 1 Unmodified _SDAEEDGGTVSQEEEDRKPK_ 0 0 0 2 P27824 P27824 P27824 CANX Calnexin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 736.3301 3 735.996253 2204.96693 70123.55 0.87669 0.00064524 -0.34861 -0.00025657 0.52809 0.00038867 735.995982356576 744.675159370376 64.389 0.56395 64.389 64.156 64.72 0 279 40 10 0 0 0 1.7919E-47 2 30578 133.93 121.98 1 1.6434 1.9436 0 211020000 84335000 126690000 5023 979 2592 2865 8185;8186 8185 SDAEEDGGTVSQEEEDRKPK 20 2 1 Unmodified _SDAEEDGGTVSQEEEDRKPK_ 0 0 0 2 P27824 P27824 P27824 CANX Calnexin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 559.0086 4 552.249009 2204.96693 80380.2 0.62236 0.0003437 0.20532 0.00011339 0.82768 0.00045709 552.750502713298 558.758712895515 64.42 0.28806 64.42 64.235 64.523 0 72 20 5 0 0 0 0.020212 1 30633 14.161 10.442 1 1.139 1.3295 0 17609000 8258000 9350800 5024 979 2592 2865 8187 8187 SDDDGFEIVPIEDPAK 16 1 0 Phospho (STY) _S(ph)DDDGFEIVPIEDPAK_ S(1)DDDGFEIVPIEDPAK S(152)DDDGFEIVPIEDPAK 0 0 1 0 B4DKU3;Q8IY81 B4DKU3 B4DKU3 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 913.8904 2 913.890229 1825.76591 64125.02 0.58269 0.00053251 0.1237 0.00011305 0.70638 0.00064556 914.392285342127 917.897176196489 122.7 0.63323 122.7 122.4 123.03 0 285 49 7 0 0 0 3.6984E-51 2 74117 152 140.79 1 0.67195 0.83202 0 24058000 12853000 11205000 5025 632 2593 2866 8188;8189 8188 1041 SDDGTQDLLHFPTK 14 1 0 Phospho (STY) _S(ph)DDGTQDLLHFPTK_ S(0.999)DDGT(0.001)QDLLHFPTK S(32.73)DDGT(-32.73)QDLLHFPT(-93.82)K 0 0 1 0 E9PRS0;B7ZL72;E9PLV1;Q9NQV6 E9PRS0 E9PRS0 PRDM10 PR domain zinc finger protein 10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 827.3652 2 827.361442 1652.70833 67247.16 1.0011 0.00082825 0.054915 4.5434E-05 1.056 0.00087369 827.361461787866 831.36850183554 107.99 0.63419 107.99 107.59 108.22 7.6294E-06 163 45 5 0 0 0 2.6157E-08 3 63200 97.767 84.811 3 0.45462 0.56954 0 27110000 14273000 12837000 5026 721 2594 2867 8190;8191;8192 8192 1191 SDHPGISITDLSK 13 1 0 Unmodified _SDHPGISITDLSK_ 0 0 0 0 A0A024R4Z6;Q08945;A0A0U1RRK2 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 685.3531 2 685.351531 1368.68851 73112.19 0.81512 0.00055864 0.15162 0.00010391 0.96674 0.00066256 685.351750778272 689.358692973727 107.78 0.71731 107.78 107.49 108.21 0 288 52 10 0 0 0 8.1985E-94 2 62900 223.87 168.34 1 0.72644 0.89905 0 227840000 130920000 96921000 5027 99 2595 2868 8193;8194 8194 SDHPGISITDLSK 13 1 0 Unmodified _SDHPGISITDLSK_ 0 0 0 0 A0A024R4Z6;Q08945;A0A0U1RRK2 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 459.9085 3 457.236779 1368.68851 89536.73 0.3749 0.00017142 -0.17375 -7.9447E-05 0.20114 9.197E-05 457.236656396252 459.908055864032 107.77 0.59417 107.77 107.5 108.1 0 211 43 8 0 0 0 0.002096 2 62892 56.139 53.011 1 0.67176 0.8336 0 109860000 68701000 41158000 5028 99 2595 2868 8195;8196 8196 SDIASHFSNK 10 1 0 Phospho (STY) _SDIASHFS(ph)NK_ SDIAS(0.016)HFS(0.984)NK S(-86.7)DIAS(-17.86)HFS(17.86)NK 0 0 1 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 593.2512 2 593.250435 1184.48632 79609.05 0.48081 0.00028524 0.097454 5.7815E-05 0.57827 0.00034306 593.25049870124 597.257579037225 58.232 0.99738 58.232 57.652 58.65 0 402 81 7 0 0 0 2.6295E-05 2 25568 94.538 75.857 3 0.59927 0.74863 0 66660000 42425000 24236000 5029 552 2596 2869 8197;8198 8197 915 SDIASHFSNK 10 1 0 Phospho (STY) _SDIASHFS(ph)NK_ SDIASHFS(1)NK S(-170.13)DIAS(-77.97)HFS(77.97)NK 0 0 1 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 593.2515 2 593.250435 1184.48632 78771.52 0.84432 0.00050089 0.085249 5.0574E-05 0.92957 0.00055147 593.250480044018 597.257517133909 27.035 0.81414 27.035 26.862 27.676 0 226 51 9 0 0 0 2.2114E-65 1 13044 186.27 168.8 3 1.6139 1.0789 0 125520000 48454000 77063000 5030 552 2596 2869 8199 8199 915 SDIASHFSNK 10 1 0 Unmodified _SDIASHFSNK_ 0 0 0 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 557.2744 2 553.26727 1104.51999 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.764 1 73.764 73.264 74.264 0 0 0 0 0.0085627 1 37657 54.191 34.487 1 5031 552 2596 2870 8200 8200 SDIASHFSNKR 11 1 1 Phospho (STY) _SDIASHFS(ph)NKR_ SDIAS(0.002)HFS(0.998)NKR S(-68.96)DIAS(-27.72)HFS(27.72)NKR 0 0 1 1 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 453.8772 3 447.869753 1340.58743 89914.6 -0.0021399 -9.584E-07 0.021762 9.7463E-06 0.019622 8.7879E-06 447.869755848801 453.877225725529 20.71 0.33747 20.71 20.557 20.895 0 77 15 8 0 0 0 0.00063908 1 7515 72.175 60.029 3 1.5748 1.2009 0 19851000 7776600 12074000 5032 552 2597 2871 8201 8201 915 SDLSVIQR 8 0 1 Phospho (STY) _SDLS(ph)VIQR_ S(0.001)DLS(0.999)VIQR S(-31.13)DLS(31.13)VIQR 0 0 1 0 Q9BVJ6;B4E343 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 499.2395 2 499.239339 996.464125 NaN NaN NaN 0.12106 6.0435E-05 NaN NaN NaN NaN 71.056 1.1055 71.056 70.515 71.62 0 0 0 0 0.016252 1 45131 48.602 29.929 2 NaN NaN 0 5381100 5381100 0 5033 1199 2598 2872 8202 8202 2386 SDNDDIEVESDEEQPR 16 0 1 Acetyl (Protein N-term),2 Phospho (STY) _(ac)S(ph)DNDDIEVES(ph)DEEQPR_ S(1)DNDDIEVES(1)DEEQPR S(73.81)DNDDIEVES(73.81)DEEQPR 1 0 2 0 A0A024R682;G3V5L1;P61244 A0A024R682 A0A024R682 MAX Protein max MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1039.8597 2 1039.8592 2077.70385 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.983 1 68.983 68.483 69.483 0 0 0 0 1.6801E-08 1 34280 73.809 67.964 1 5034 119 2599 2873 8203 8203 172;173 SDPDGGDSPLPASGGPLTCK 20 1 0 Phospho (STY) _SDPDGGDS(ph)PLPASGGPLTCK_ S(0.03)DPDGGDS(0.968)PLPAS(0.002)GGPLTCK S(-15.13)DPDGGDS(15.13)PLPAS(-27.31)GGPLT(-39.3)CK 0 0 1 0 Q8N1G0 Q8N1G0 Q8N1G0 ZNF687 Zinc finger protein 687 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1008.9304 2 1004.4219 2006.82925 60198.96 0.16936 0.00017011 0.48681 0.00048896 0.65617 0.00065907 1004.42262668231 1008.43025674372 84.717 0.88089 84.717 84.258 85.139 0 548 79 9 0 0 0 4.3425E-05 1 54251 47.082 42.537 4 2.2927 1.5288 0 106870000 32567000 74304000 5035 1150 2600 2874 8204 8204 2222 SDPNRETDDTLVLSFVGQTR 20 0 2 Unmodified _SDPNRETDDTLVLSFVGQTR_ 0 0 0 1 B4DZP5;B4DSA8;Q16531;F5GY55;B7Z2A1;B7Z859 B4DZP5 B4DZP5 DDB1 DNA damage-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 757.7118 3 750.704744 2249.0924 67956.08 1.2146 0.00091181 0.054363 4.0811E-05 1.269 0.00095262 750.705164418591 757.376997604855 133.52 0.2809 133.52 133.32 133.6 1.5259E-05 37 12 8 0 0 0 5.7324E-08 1 81283 65.784 57.697 1 0.90087 1.1112 0 29738000 17002000 12737000 5036 656 2601 2875 8205 8205 SDPNRETDDTLVLSFVGQTR 20 0 2 Unmodified _SDPNRETDDTLVLSFVGQTR_ 0 0 0 1 B4DZP5;B4DSA8;Q16531;F5GY55;B7Z2A1;B7Z859 B4DZP5 B4DZP5 DDB1 DNA damage-binding protein 1 MULTI-SECPEP 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 757.7122 3 750.704744 2249.0924 72081.6 1.1047 0.00082933 0.25333 0.00019017 1.3581 0.0010195 751.038902688706 757.711609883858 117.83 0.31895 117.83 117.67 117.99 7.6294E-06 139 27 8 0 0 0 0.030095 1 75868 22.585 22.585 1 1.2847 1.1143 0 11341000 5553900 5787300 5037 656 2601 2875 8206 8206 SDQEAKPSTEDLGDK 15 2 0 Acetyl (Protein N-term),Phospho (STY) _(ac)S(ph)DQEAKPSTEDLGDK_ S(1)DQEAKPSTEDLGDK S(68.93)DQEAKPS(-68.93)T(-68.93)EDLGDK 1 0 1 1 B8ZZJ0;B9A032;A0A024R3Z2;B8ZZN6;P63165 B8ZZJ0 B8ZZJ0 SUMO1 Small ubiquitin-related modifier 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 871.8636 2 871.361836 1740.70912 65608.15 0.83637 0.00072878 0.15131 0.00013185 0.98769 0.00086063 871.361924966837 879.376282372213 48.21 0.95463 48.21 47.708 48.663 0 372 64 8 0 0 0 3.2319E-06 2 18677 81.448 73.881 3 0.84624 1.0065 0 25938000 14652000 11285000 5038 83 2602 2876 8207;8208 8208 109 SDQEAKPSTEDLGDKK 16 3 0 Acetyl (Protein N-term),Phospho (STY) _(ac)S(ph)DQEAKPSTEDLGDKK_ S(1)DQEAKPSTEDLGDKK S(38.84)DQEAKPS(-38.84)T(-38.84)EDLGDKK 1 0 1 2 B8ZZJ0;B9A032;A0A024R3Z2;B8ZZN6;P63165 B8ZZJ0 B8ZZJ0 SUMO1 Small ubiquitin-related modifier 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 947.4307 2 935.409318 1868.80408 62347.33 0.53163 0.00049729 0.16632 0.00015558 0.69795 0.00065287 935.409546946944 947.430761061838 51.082 1.0672 51.082 50.663 51.731 -3.8147E-06 568 89 8 0 0 0 1.8699E-05 2 20579 61.641 55.4 3 0.81471 1.0319 0 68834000 36602000 32233000 5039 83 2603 2877 8209;8210 8210 109 SDQEAKPSTEDLGDKK 16 3 0 Acetyl (Protein N-term),Phospho (STY) _(ac)S(ph)DQEAKPSTEDLGDKK_ S(1)DQEAKPSTEDLGDKK S(53.8)DQEAKPS(-54.33)T(-53.8)EDLGDKK 1 0 1 2 B8ZZJ0;B9A032;A0A024R3Z2;B8ZZN6;P63165 B8ZZJ0 B8ZZJ0 SUMO1 Small ubiquitin-related modifier 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 623.9418 3 623.941971 1868.80408 76141.14 0.53244 0.00033221 0.18734 0.00011689 0.71978 0.0004491 623.942060866256 631.956356001626 51.175 1.1738 51.175 50.543 51.717 0 603 98 10 0 0 0 5.113E-07 1 21049 76.704 76.704 3 0.84681 1.0725 0 78963000 41863000 37100000 5040 83 2603 2877 8211 8211 109 SDQEAKPSTEDLGDKK 16 3 0 Acetyl (Protein N-term),Phospho (STY) _(ac)S(ph)DQEAKPSTEDLGDKK_ S(1)DQEAKPSTEDLGDKK S(70.12)DQEAKPS(-70.25)T(-70.12)EDLGDKK 1 0 1 2 B8ZZJ0;B9A032;A0A024R3Z2;B8ZZN6;P63165 B8ZZJ0 B8ZZJ0 SUMO1 Small ubiquitin-related modifier 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 623.9424 3 623.941971 1868.80408 75644.38 0.90274 0.00056326 -0.0086427 -5.3925E-06 0.8941 0.00055786 623.941980235765 631.956098992286 28.275 0.82911 28.275 28.05 28.879 0 420 59 10 0 0 0 3.3498E-12 2 14069 92.492 82.435 3 1.0314 0.89419 0 197000000 90294000 106710000 5041 83 2603 2877 8212;8213 8212 109 SDQEAKPSTEDLGDKK 16 3 0 Phospho (STY) _S(ph)DQEAKPSTEDLGDKK_ S(1)DQEAKPSTEDLGDKK S(83.13)DQEAKPS(-83.13)T(-86.18)EDLGDKK 0 0 1 2 B8ZZJ0;B9A032;A0A024R3Z2;B8ZZN6;P63165 B8ZZJ0 B8ZZJ0 SUMO1 Small ubiquitin-related modifier 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 610.2731 3 609.938449 1826.79352 76286.75 0.62702 0.00038244 0.1756 0.00010711 0.80262 0.00048955 609.938254974793 617.952839850491 19.638 0.28884 19.638 19.497 19.786 -1.9073E-06 77 12 9 0 0 0 1.5564E-23 1 6598 119.01 119.01 3 1.0127 0.90306 0 42185000 21770000 20415000 5042 83 2603 2878 8214 8214 109 SDSEDICLFTK 11 1 0 Phospho (STY) _SDS(ph)EDICLFTK_ S(0.132)DS(0.868)EDICLFTK S(-8.17)DS(8.17)EDICLFT(-53.84)K 0 0 1 0 Q32Q62;J3QSV6;A0PJ61;O76021;I3L234;I3L3C4;I3L3U9;A0PJ87 Q32Q62 Q32Q62 RSL1D1 Ribosomal L1 domain-containing protein 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 701.788 2 697.780908 1393.54726 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.58 1 103.58 103.08 104.08 0 0 0 0 0.001676 1 59852 62.14 50.989 3 5043 1084 2604 2879 8215 8215 2042 SDSEDICLFTK 11 1 0 Phospho (STY) _SDS(ph)EDICLFTK_ S(0.359)DS(0.641)EDICLFTK S(-2.52)DS(2.52)EDICLFT(-49.59)K 0 0 1 0 Q32Q62;J3QSV6;A0PJ61;O76021;I3L234;I3L3C4;I3L3U9;A0PJ87 Q32Q62 Q32Q62 RSL1D1 Ribosomal L1 domain-containing protein 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 701.7886 2 697.780908 1393.54726 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.67 1 103.67 103.17 104.17 0 0 0 0 0.002886 1 59911 55.314 46.717 3 5044 1084 2604 2879 8216 8216 2042 SDSFENPVLQQHFR 14 0 1 Phospho (STY) _S(ph)DSFENPVLQQHFR_ S(0.551)DS(0.449)FENPVLQQHFR S(0.9)DS(-0.9)FENPVLQQHFR 0 0 1 0 B4DE32;B1AHC9;B2RDN9;A0A024R1N4;P12956;B4E356;Q6IC76 B4DE32 B4DE32 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 598.9366 3 595.264831 1782.77266 80979.26 1.21 0.0007203 -0.43089 -0.0002565 0.77915 0.0004638 595.264840242176 598.934654270326 102.86 0.96268 102.86 102.39 103.35 -7.6294E-06 143 67 5 0 0 0 0.001451 1 59301 44.193 44.193 2 0.41856 0.49796 0 15694000 10830000 4863600 5045 50 2605 2880 8217 8217 61;62 SDSFENPVLQQHFR 14 0 1 Phospho (STY) _S(ph)DSFENPVLQQHFR_ S(0.5)DS(0.5)FENPVLQQHFR S(0)DS(0)FENPVLQQHFR 0 0 1 0 B4DE32;B1AHC9;B2RDN9;A0A024R1N4;P12956;B4E356;Q6IC76 B4DE32 B4DE32 XRCC6;G22P1 X-ray repair cross-complementing protein 6 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 897.8973 2 892.393608 1782.77266 NaN NaN NaN -1.0664 -0.00095165 NaN NaN NaN NaN 102.44 0.17099 102.44 102.37 102.55 0 0 0 0 0.0014987 2 59084 51.927 42.272 2 NaN NaN 0 2705800 0 2705800 5046 50 2605 2880 8218;8219 8219 61;62 SDSFENPVLQQHFR 14 0 1 Phospho (STY) _S(ph)DSFENPVLQQHFR_ S(0.5)DS(0.5)FENPVLQQHFR S(0)DS(0)FENPVLQQHFR 0 0 1 0 B4DE32;B1AHC9;B2RDN9;A0A024R1N4;P12956;B4E356;Q6IC76 B4DE32 B4DE32 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 892.3945 2 892.393608 1782.77266 64128.16 1.1829 0.0010556 -0.058438 -5.215E-05 1.1244 0.0010034 892.393804377001 897.39662888286 100.66 0.96417 100.66 100.35 101.31 0 407 91 6 0 0 0 0.0026264 1 64607 59.592 52.212 2 0.20638 0.1479 0 28578000 22944000 5633800 5047 50 2605 2880 8220 8220 61;62 SDSFENPVLQQHFR 14 0 1 Unmodified _SDSFENPVLQQHFR_ 0 0 0 0 B4DE32;B1AHC9;B2RDN9;A0A024R1N4;P12956;B4E356;Q6IC76 B4DE32 B4DE32 XRCC6;G22P1 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 571.945 3 568.609387 1702.80633 82081.11 0.68889 0.00039171 -0.031836 -1.8102E-05 0.65705 0.00037361 568.943199417863 571.945789040334 108.69 0.77298 108.69 108.34 109.11 0 177 60 5 0 0 0 0.017126 1 63817 25.53 25.53 1 0.45612 0.55182 0 19469000 10557000 8911600 5048 50 2605 2881 8221 8221 SDSGGSSSEPFDR 13 0 1 Phospho (STY) _SDS(ph)GGSSSEPFDR_ S(0.098)DS(0.902)GGSSSEPFDR S(-9.65)DS(9.65)GGS(-36.17)S(-45)S(-49.73)EPFDR 0 0 1 0 P48634 P48634 P48634 PRRC2A Protein PRRC2A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 709.2614 2 704.256643 1406.49873 78850.04 1.0245 0.00072149 0.044424 3.1286E-05 1.0689 0.00075277 704.256513161255 709.260838795184 47.509 0.83527 47.509 46.947 47.782 -3.8147E-06 158 57 5 0 0 0 0.0047989 1 18268 58.116 50.333 5 2.2526 2.4594 0 5281600 1853300 3428300 5049 997 2606 2882 8222 8222 1805 SDSKEDENLVINEVINSPK 19 2 0 Phospho (STY) _SDSKEDENLVINEVINS(ph)PK_ SDSKEDENLVINEVINS(1)PK S(-56.8)DS(-52.31)KEDENLVINEVINS(52.31)PK 0 0 1 1 A0A024RC19;Q5FWF5 A0A024RC19 A0A024RC19 ESCO1 N-acetyltransferase ESCO1 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1114.0303 2 1105.51485 2209.01514 NaN NaN NaN 0.31491 0.00034813 NaN NaN NaN NaN 106.7 1.0142 106.7 106.19 107.2 -7.6294E-06 0 0 0 2.4566E-08 1 68557 59.513 46.1 3 NaN NaN 0 21045000 0 21045000 5050 206 2607 2883 8223 8223 317 SDSPAIQLR 9 0 1 Phospho (STY) _SDS(ph)PAIQLR_ SDS(1)PAIQLR S(-37.46)DS(37.46)PAIQLR 0 0 1 0 Q96ST3;B3KQE3 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 533.7496 2 533.750071 1065.48559 83704.88 0.40772 0.00021762 -0.079829 -4.2609E-05 0.32789 0.00017501 533.75003957714 538.753989483433 71.579 1.2273 71.579 70.978 72.205 0 306 114 5 0 0 0 8.9124E-05 2 35797 109.79 96.014 2 0.63027 0.7782 0 32996000 18558000 14438000 5051 1187 2608 2884 8224;8225 8225 2337 SDSSPLPSEKSDEDDDK 17 2 0 Phospho (STY) _SDSSPLPSEKS(ph)DEDDDK_ SDSSPLPS(0.218)EKS(0.782)DEDDDK S(-40.97)DS(-37.26)S(-37.26)PLPS(-5.56)EKS(5.56)DEDDDK 0 0 1 1 O14646;A0A087WVF4 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 965.8757 2 965.875505 1929.73646 62934.53 0.29633 0.00028622 0.11526 0.00011132 0.41159 0.00039754 965.875885213214 973.889828538834 51.025 0.79881 51.025 50.618 51.417 0 207 65 6 0 0 0 4.9072E-05 1 20731 57.148 57.148 5 0.38392 0.41177 0 10398000 6913200 3484400 5052 919 2609 2885 8226 8226 1545 SDSSPLPSEKSDEDDDK 17 2 0 Phospho (STY) _SDSSPLPSEKS(ph)DEDDDK_ SDSSPLPS(0.201)EKS(0.799)DEDDDK S(-57.27)DS(-50.2)S(-49.58)PLPS(-6)EKS(6)DEDDDK 0 0 1 1 O14646;A0A087WVF4 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 966.3799 2 965.875505 1929.73646 61655.6 0.61745 0.00059638 0.25411 0.00024544 0.87156 0.00084182 965.875601872029 973.889471900119 30.111 0.57889 30.111 29.801 30.38 0 213 39 9 0 0 0 2.1446E-09 1 15520 82.709 76.985 5 0.36617 0.27729 0 53085000 38629000 14456000 5053 919 2609 2885 8227 8227 1545 SDTPEVHPPLPISQSPENESNDR 23 0 1 Phospho (STY) _SDTPEVHPPLPISQS(ph)PENESNDR_ SDTPEVHPPLPIS(0.238)QS(0.757)PENES(0.004)NDR S(-43.59)DT(-43.78)PEVHPPLPIS(-5.02)QS(5.02)PENES(-22.49)NDR 0 0 1 0 Q03164;E9PR05 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 879.0562 3 875.720333 2624.13917 NaN NaN NaN -1.3925 -0.0012194 NaN NaN NaN NaN 100.31 0.39793 100.31 100.02 100.42 0 0 0 0 1.6735E-10 1 57256 58.722 44.488 5 NaN NaN 0 15215000 0 15215000 5054 1034 2610 2886 8228 8228 1896;1897 SDTPEVHPPLPISQSPENESNDRR 24 0 2 Phospho (STY) _SDTPEVHPPLPISQSPENES(ph)NDRR_ SDTPEVHPPLPIS(0.317)QS(0.317)PENES(0.367)NDRR S(-41.24)DT(-37.04)PEVHPPLPIS(-0.64)QS(-0.64)PENES(0.64)NDRR 0 0 1 1 Q03164;E9PR05 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 934.7613 3 927.754036 2780.24028 62661.73 1.0091 0.00093622 0.17902 0.00016609 1.1882 0.0011023 928.088638840483 934.760741980303 88.557 1.602 88.557 87.835 89.437 0 1281 156 12 0 0 0 1.3754E-06 1 57404 43.612 43.612 5 2.1134 1.8447 0 189130000 64525000 124600000 5055 1034 2611 2887 8229 8229 1896;1897 SDTPLGSPLEPGQILEK 17 1 0 Phospho (STY) _SDTPLGS(ph)PLEPGQILEK_ S(0.016)DT(0.016)PLGS(0.968)PLEPGQILEK S(-17.87)DT(-17.87)PLGS(17.87)PLEPGQILEK 0 0 1 0 H0YEX2 H0YEX2 H0YEX2 TAF2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 931.4548 2 930.953164 1859.89178 64107.25 0.72988 0.00067949 0.052012 4.842E-05 0.7819 0.00072791 930.953502284218 934.960420639566 120.68 0.3696 120.68 120.49 120.86 -7.6294E-06 92 29 5 0 0 0 9.4068E-05 1 72762 52.823 46.978 3 0.30946 0.36702 0 8539600 5075600 3464000 5056 859 2612 2888 8230 8230 1466 SDVEENNFEGR 11 0 1 Phospho (STY) _S(ph)DVEENNFEGR_ S(1)DVEENNFEGR S(62.34)DVEENNFEGR 0 0 1 0 Q549U1;Q13595;F8WEH2 Q549U1 Q549U1 HSU53209;TRA2A Transformer-2 protein homolog alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 688.2654 2 688.261728 1374.5089 74846.44 0.7785 0.00053581 0.46571 0.00032053 1.2442 0.00085634 688.26285775345 693.266264709262 46.509 0.72858 46.509 46.187 46.916 0 157 51 4 0 0 0 0.0074573 1 17730 62.338 57.34 1 0.79005 0.85378 0 2825200 1218200 1607000 5057 1052 2613 2889 8231 8231 1961 SDVEENNFEGR 11 0 1 Acetyl (Protein N-term),Phospho (STY) _(ac)S(ph)DVEENNFEGR_ S(1)DVEENNFEGR S(113.22)DVEENNFEGR 1 0 1 0 Q549U1;Q13595;F8WEH2 Q549U1 Q549U1 HSU53209;TRA2A Transformer-2 protein homolog alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 714.2719 2 709.26701 1416.51947 73212.2 0.73736 0.00052299 -0.17357 -0.00012311 0.5638 0.00039988 709.266908478448 714.271116079494 62.189 1.0605 62.189 61.612 62.672 0 239 75 5 0 0 0 1.0152E-08 2 28651 113.22 105 1 0.74783 0.92019 0 23580000 13021000 10559000 5058 1052 2613 2890 8232;8233 8232 1961 SDVEENNFEGRESR 14 0 2 Acetyl (Protein N-term),2 Phospho (STY) _(ac)S(ph)DVEENNFEGRES(ph)R_ S(1)DVEENNFEGRES(1)R S(42.06)DVEENNFEGRES(42.06)R 1 0 2 1 Q549U1;Q13595 Q549U1 Q549U1 HSU53209;TRA2A Transformer-2 protein homolog alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 945.3475 2 935.338042 1868.66153 62617.76 0.79036 0.00073925 0.84218 0.00078772 1.6325 0.001527 935.338892414479 945.346515904134 57.05 1.1645 57.05 56.348 57.512 0 561 97 8 0 0 0 0.0040506 1 25016 42.059 36.745 1 0.69256 0.85989 0 53587000 29596000 23991000 5059 1052 2614 2891 8234 8234 1961;1962 SDVYYFSPSGK 11 1 0 Phospho (STY) _SDVYYFS(ph)PSGK_ SDVYYFS(0.996)PS(0.004)GK S(-108.87)DVY(-82.9)Y(-66.76)FS(23.95)PS(-23.95)GK 0 0 1 0 Q9UBB5;X6RBL6;A0A024R2B8 Q9UBB5 Q9UBB5 MBD2 Methyl-CpG-binding domain protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 665.2739 2 665.273576 1328.5326 75092.12 0.88296 0.00058741 -0.17625 -0.00011725 0.70671 0.00047016 665.273368834293 669.28050575202 86.257 1.9057 86.257 85.178 87.083 0 890 183 8 0 0 0 1.4501E-26 5 46366 154.94 141.17 5 0.8106 1.0035 0 200540000 111500000 89045000 5060 1226 2615 2892 8235;8236;8237;8238;8239 8236 2490;2491 SDVYYFSPSGK 11 1 0 Phospho (STY) _SDVYYFSPS(ph)GK_ SDVYYFS(0.209)PS(0.791)GK S(-51.76)DVY(-39.17)Y(-34.79)FS(-5.78)PS(5.78)GK 0 0 1 0 Q9UBB5;X6RBL6;A0A024R2B8 Q9UBB5 Q9UBB5 MBD2 Methyl-CpG-binding domain protein 2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 665.2736 2 665.273576 1328.5326 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.786 1 87.786 87.286 88.286 -7.6294E-06 0 0 0 0.0041181 1 47804 52.265 44.041 5 5061 1226 2615 2892 8240 8240 2490;2491 SDVYYFSPSGK 11 1 0 Phospho (STY) _SDVYYFS(ph)PSGK_ SDVYYFS(0.925)PS(0.075)GK S(-76.22)DVY(-50.78)Y(-44.98)FS(10.92)PS(-10.92)GK 0 0 1 0 Q9UBB5;X6RBL6;A0A024R2B8 Q9UBB5 Q9UBB5 MBD2 Methyl-CpG-binding domain protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 669.2818 2 665.273576 1328.5326 75144.44 1.0921 0.00072655 -0.0044091 -2.9333E-06 1.0877 0.00072361 665.2736990771 669.280596486195 87.949 1.9871 87.949 87.3 89.288 0 1022 191 9 0 0 0 0.00099468 3 56266 80.522 68.603 5 1.7976 1.1998 0 393580000 144490000 249100000 5062 1226 2615 2892 8241;8242;8243 8241 2490;2491 SDVYYFSPSGKK 12 2 0 Phospho (STY) _SDVYYFS(ph)PSGKK_ SDVYY(0.003)FS(0.884)PS(0.114)GKK S(-62.28)DVY(-43.42)Y(-25.3)FS(8.91)PS(-8.91)GKK 0 0 1 1 Q9UBB5;X6RBL6;A0A024R2B8 Q9UBB5 Q9UBB5 MBD2 Methyl-CpG-binding domain protein 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 737.3362 2 729.321057 1456.62756 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.953 1 78.953 78.453 79.453 0 0 0 0 0.00010677 1 41499 68.809 48.146 5 5063 1226 2616 2893 8244 8244 2490;2491 SDVYYFSPSGKK 12 2 0 Phospho (STY) _SDVYYFS(ph)PSGKK_ SDVYY(0.005)FS(0.792)PS(0.203)GKK S(-49.61)DVY(-36.9)Y(-22.18)FS(5.92)PS(-5.92)GKK 0 0 1 1 Q9UBB5;X6RBL6;A0A024R2B8 Q9UBB5 Q9UBB5 MBD2 Methyl-CpG-binding domain protein 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 737.3364 2 729.321057 1456.62756 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.018 1 79.018 78.518 79.518 0 0 0 0 0.00099516 1 41548 56.139 43.757 5 5064 1226 2616 2893 8245 8245 2490;2491 SDVYYFSPSGKK 12 2 0 Phospho (STY) _SDVYYFS(ph)PSGKK_ SDVYY(0.002)FS(0.879)PS(0.119)GKK S(-55.88)DVY(-40.66)Y(-25.94)FS(8.69)PS(-8.69)GKK 0 0 1 1 Q9UBB5;X6RBL6;A0A024R2B8 Q9UBB5 Q9UBB5 MBD2 Methyl-CpG-binding domain protein 2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 729.3239 2 729.321057 1456.62756 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.029 1 80.029 79.529 80.529 0 0 0 0 0.00059908 1 42310 59.898 46.219 5 5065 1226 2616 2893 8246 8246 2490;2491 SDVYYFSPSGKK 12 2 0 Phospho (STY) _SDVYYFS(ph)PSGKK_ SDVY(0.003)Y(0.014)FS(0.764)PS(0.219)GKK S(-37.21)DVY(-24.6)Y(-17.38)FS(5.42)PS(-5.42)GKK 0 0 1 1 Q9UBB5;X6RBL6;A0A024R2B8 Q9UBB5 Q9UBB5 MBD2 Methyl-CpG-binding domain protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 729.3215 2 729.321057 1456.62756 70892.09 1.1107 0.00081006 -0.085487 -6.2347E-05 1.0252 0.00074771 729.320826497358 737.33530213908 65.609 0.49738 65.609 65.408 65.905 0 199 42 6 0 0 0 0.0071804 1 41044 41.227 32.714 5 1.5125 1.2527 0 17414000 5986400 11428000 5066 1226 2616 2893 8247 8247 2490;2491 SDVYYFSPSGKK 12 2 0 Phospho (STY) _SDVYYFS(ph)PSGKK_ SDVYY(0.001)FS(0.82)PS(0.18)GKK S(-54.3)DVY(-39.08)Y(-30.84)FS(6.59)PS(-6.59)GKK 0 0 1 1 Q9UBB5;X6RBL6;A0A024R2B8 Q9UBB5 Q9UBB5 MBD2 Methyl-CpG-binding domain protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 737.3358 2 729.321057 1456.62756 70892.09 1.1238 0.00081958 0.082549 6.0204E-05 1.2063 0.00087979 729.320976384509 737.335363192376 66.108 0.77662 66.108 65.819 66.595 0 281 70 6 0 0 0 0.0031991 2 41315 58.32 58.32 5 1.5211 1.2446 0 14174000 5358300 8815500 5067 1226 2616 2893 8248;8249 8248 2490;2491 SDVYYFSPSGKK 12 2 0 Phospho (STY) _SDVYYFS(ph)PSGKK_ SDVYYFS(0.854)PS(0.146)GKK S(-63.18)DVY(-44.33)Y(-42.23)FS(7.67)PS(-7.67)GKK 0 0 1 1 Q9UBB5;X6RBL6;A0A024R2B8 Q9UBB5 Q9UBB5 MBD2 Methyl-CpG-binding domain protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 737.336 2 729.321057 1456.62756 70892.1 1.1154 0.00081347 0.17257 0.00012586 1.2879 0.00093933 729.321694571853 737.335083548761 67.288 1.8091 67.288 66.352 68.161 0 894 163 8 0 0 0 0.001427 2 41914 69.716 69.716 5 1.7614 1.3238 0 70633000 26834000 43799000 5068 1226 2616 2893 8250;8251 8250 2490;2491 SEAAAPHTDAGGGLSSDEEEGTSSQAEAAR 30 0 1 Phospho (STY) _SEAAAPHTDAGGGLS(ph)SDEEEGTSSQAEAAR_ S(0.001)EAAAPHT(0.096)DAGGGLS(0.448)S(0.448)DEEEGT(0.005)S(0.001)SQAEAAR S(-25.8)EAAAPHT(-6.71)DAGGGLS(0)S(0)DEEEGT(-19.39)S(-25.3)S(-30.88)QAEAAR 0 0 1 0 X5DRB1;A8K146;A0A024R2M8;Q01831;D9I4E1 X5DRB1 X5DRB1 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 993.7451 3 990.074052 2967.20033 60860.58 0.32446 0.00032124 -0.051754 -5.1241E-05 0.27271 0.00027 990.407093250639 993.744602828541 58.112 1.1666 58.112 57.559 58.725 3.8147E-06 695 96 11 0 0 0 2.5473E-16 2 25955 56.156 50.126 7 0.62229 0.78622 0 144160000 91409000 52751000 5069 66 2617 2894 8252;8253 8253 85;86 SEAAAPHTDAGGGLSSDEEEGTSSQAEAAR 30 0 1 2 Phospho (STY) _SEAAAPHTDAGGGLS(ph)S(ph)DEEEGTSSQAEAAR_ S(0.054)EAAAPHT(0.566)DAGGGLS(0.679)S(0.679)DEEEGT(0.013)S(0.006)S(0.003)QAEAAR S(-13.28)EAAAPHT(-1.46)DAGGGLS(1.46)S(1.46)DEEEGT(-19.5)S(-23.73)S(-27.65)QAEAAR 0 0 2 0 X5DRB1;A8K146;A0A024R2M8;Q01831;D9I4E1 X5DRB1 X5DRB1 XPC DNA repair protein complementing XP-C cells MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1020.0667 3 1016.7295 3047.16666 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.17 1 57.17 56.67 57.67 -3.8147E-06 0 0 0 2.5454E-05 1 24995 42.894 38.897 21 5070 66 2617 2895 8254 8254 85;86 SEAAEPPKTPPSSCDSTNAAIAK 23 2 0 Phospho (STY) _SEAAEPPKT(ph)PPSSCDSTNAAIAK_ S(0.001)EAAEPPKT(0.577)PPS(0.2)S(0.2)CDS(0.011)T(0.011)NAAIAK S(-29.83)EAAEPPKT(4.59)PPS(-4.59)S(-4.59)CDS(-17.36)T(-17.36)NAAIAK 0 0 1 1 E3VVS3;A0A0C4DFR3;Q9NQR1;C9JKQ0 E3VVS3 E3VVS3 SETD8 N-lysine methyltransferase SETD8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 809.7045 3 803.692838 2408.05668 67786.44 0.78681 0.00063236 0.2434 0.00019562 1.0302 0.00082798 804.027309423519 809.370218865422 59.479 0.87495 59.479 59.042 59.917 0 465 67 10 0 0 0 1.3044E-05 1 26520 41.256 41.256 6 1.9453 2.4671 0 70735000 23503000 47232000 5071 314 2618 2896 8255 8255 2688 SEAAEPPKTPPSSCDSTNAAIAK 23 2 0 Phospho (STY) _SEAAEPPKT(ph)PPSSCDSTNAAIAK_ SEAAEPPKT(0.942)PPS(0.044)S(0.012)CDS(0.001)T(0.001)NAAIAK S(-45.7)EAAEPPKT(13.33)PPS(-13.33)S(-18.89)CDS(-29.41)T(-30.51)NAAIAK 0 0 1 1 E3VVS3;A0A0C4DFR3;Q9NQR1;C9JKQ0 E3VVS3 E3VVS3 SETD8 N-lysine methyltransferase SETD8 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 809.3713 3 803.692838 2408.05668 66714 1.0237 0.00082276 -0.28037 -0.00022533 0.74336 0.00059744 804.02719623729 809.369825457037 49.419 1.8862 49.419 48.411 50.297 0 1524 180 12 0 0 0 1.7665E-09 1 29944 57.826 57.826 6 2.7854 2.0659 0 189770000 49366000 140410000 5072 314 2618 2896 8256 8256 2688 SEAASPALPVITK 13 1 0 Phospho (STY) _SEAAS(ph)PALPVITK_ S(0.001)EAAS(0.996)PALPVIT(0.003)K S(-28.42)EAAS(25.52)PALPVIT(-25.52)K 0 0 1 0 I6ZZT5;Q99958 I6ZZT5 I6ZZT5 FOXC2 Forkhead box protein C2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 682.3497 2 682.347075 1362.6796 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.996 1 98.996 98.496 99.496 0 0 0 0 0.0012543 1 56373 51.643 30.803 3 5073 889 2619 2897 8257 8257 1503 SEDDSAKFDSNEEDSASVFSPSFGLK 26 2 0 Phospho (STY) _SEDDSAKFDS(ph)NEEDSASVFSPSFGLK_ S(0.001)EDDS(0.108)AKFDS(0.873)NEEDS(0.016)AS(0.001)VFSPSFGLK S(-28.83)EDDS(-9.09)AKFDS(9.09)NEEDS(-17.34)AS(-27.83)VFS(-41.41)PS(-45.22)FGLK 0 0 1 1 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 959.4004 3 959.065834 2874.17567 NaN NaN NaN 1.8232 0.0017486 NaN NaN NaN NaN 118.83 1.5765 118.83 118.18 119.76 -7.6294E-06 0 0 0 1.9946E-08 1 71098 56.468 44.836 7 NaN NaN 0 73680000 73680000 0 5074 1032 2620 2898 8258 8258 1863;1864;1865 SEDGVEGDLGETQSR 15 0 1 Phospho (STY) _S(ph)EDGVEGDLGETQSR_ S(1)EDGVEGDLGETQSR S(76.45)EDGVEGDLGET(-76.45)QS(-80.34)R 0 0 1 0 Q09666;B4DTV0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 835.0157 2 829.830703 1657.64685 67023.28 0.74802 0.00062073 0.013095 1.0866E-05 0.76111 0.00063159 830.331829513936 834.83521697474 58.948 1.0489 58.948 58.392 59.441 -3.8147E-06 409 86 6 0 0 0 1.8336E-06 1 26148 82.464 75.735 3 1.1292 1.3878 0 30178000 14221000 15958000 5075 1042 2621 2899 8259 8259 1941 SEDMPFSPK 9 1 0 Oxidation (M),Phospho (STY) _SEDM(ox)PFS(ph)PK_ SEDM(1)PFSPK SEDMPFS(1)PK SEDM(45.08)PFSPK S(-42.88)EDMPFS(42.88)PK 0 1 1 0 B7Z3E7;A6NNK5;Q12888;C9JXV0;A8KA50 B7Z3E7 B7Z3E7 TP53BP1 Tumor suppressor p53-binding protein 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 567.2147 2 567.214672 1132.41479 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.243 1 57.243 56.743 57.743 0 0 0 0 0.012986 1 25047 45.077 24.207 2 5076 430 2622 2900 8260 8260 109 747 SEEDNEIESEEEVQPK 16 1 0 Phospho (STY) _SEEDNEIES(ph)EEEVQPK_ SEEDNEIES(1)EEEVQPK S(-117.75)EEDNEIES(117.75)EEEVQPK 0 0 1 0 A0A087WWJ1;Q1L838;P52701;C9J7Y7;Q3SWU9 A0A087WWJ1 A0A087WWJ1 MSH6;GTBP DNA mismatch repair protein Msh6 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 985.8923 2 985.891155 1969.76776 NaN NaN NaN 0.11955 0.00011786 NaN NaN NaN NaN 58.048 1.0184 58.048 57.46 58.478 0 0 0 0 5.6204E-82 1 25399 159.13 122.93 2 NaN NaN 0 45817000 45817000 0 5077 259 2623 2901 8261 8261 416 SEEELLVIFNK 11 1 0 Unmodified _SEEELLVIFNK_ 0 0 0 0 Q9NX58;A8K3Y5 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 660.8555 2 660.855918 1319.69728 NaN NaN NaN -0.20543 -0.00013576 NaN NaN NaN NaN 124.52 0.1283 124.52 124.46 124.59 0 0 0 0 4.78E-15 1 75488 108.98 65.951 1 NaN NaN 0 867180 867180 0 5078 1222 2624 2902 8262 8262 SEEHSPPRGINDR 13 0 2 Phospho (STY) _SEEHS(ph)PPRGINDR_ SEEHS(1)PPRGINDR S(-34.19)EEHS(34.19)PPRGINDR 0 0 1 1 B9ZVT1;Q8IXT5 B9ZVT1 B9ZVT1 RBM12B RNA-binding protein 12B ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 525.2304 3 525.230009 1572.6682 NaN NaN NaN -0.067989 -3.571E-05 NaN NaN NaN NaN 17.893 0.38192 17.893 17.701 18.083 0 0 0 0 0.0032168 1 5025 44.567 26.471 2 NaN NaN 0 10924000 10924000 0 5079 733 2625 2903 8263 8263 1232 SEESPVYSNSSVR 13 0 1 Phospho (STY) _SEES(ph)PVYSNSSVR_ SEES(1)PVYSNSSVR S(-40.16)EES(40.16)PVY(-79.29)S(-76.2)NS(-83.91)S(-87.61)VR 0 0 1 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 765.822 2 760.816867 1519.61918 70117.38 0.77774 0.00059172 0.43663 0.0003322 1.2144 0.00092391 760.817575410414 765.821092593313 49.488 1.4 49.488 48.722 50.122 -3.8147E-06 717 114 8 0 0 0 2.9498E-14 4 19878 113.52 79.981 6 0.65167 0.82116 0 57887000 35477000 22410000 5080 1035 2626 2904 8264;8265;8266;8267 8266 1923 SEESPVYSNSSVR 13 0 1 Phospho (STY) _SEES(ph)PVYSNSSVR_ S(0.001)EES(0.999)PVYSNSSVR S(-30.9)EES(30.9)PVY(-60.12)S(-44.02)NS(-48.99)S(-48.21)VR 0 0 1 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 765.8212 2 760.816867 1519.61918 70486.98 0.89357 0.00067984 -0.74258 -0.00056497 0.15099 0.00011488 760.817420160009 765.821056731652 27.557 0.22969 27.557 27.447 27.676 0 51 12 6 0 0 0 0.00071294 1 13548 73.927 45.96 6 1.1323 0.90195 0 9211100 4281800 4929200 5081 1035 2626 2904 8268 8268 1923 SEESPVYSNSSVR 13 0 1 Phospho (STY) _SEES(ph)PVYSNSSVR_ SEES(1)PVYSNSSVR S(-43.08)EES(43.08)PVY(-75.1)S(-69.81)NS(-78.49)S(-77.44)VR 0 0 1 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 760.8179 2 760.816867 1519.61918 69880.21 1.0842 0.00082487 0.7259 0.00055227 1.8101 0.0013771 760.817375003422 765.822021408285 41.273 1.4044 41.273 40.828 42.233 0 640 121 11 0 0 0 1.4393E-10 2 23960 108.97 71.643 6 1.297 0.84796 0 397630000 174790000 222840000 5082 1035 2626 2904 8269;8270 8269 1923 SEETNTEIVECILK 14 1 0 Unmodified _SEETNTEIVECILK_ 0 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 836.913 2 832.90601 1663.79747 69033.04 1.1847 0.00098671 -0.07638 -6.3617E-05 1.1083 0.0009231 832.906690726415 836.912844804421 116.79 0.59266 116.79 116.46 117.05 0 167 57 5 0 0 0 0.028106 1 75124 36.417 36.417 1 3.9645 3.0113 0 7885400 2283400 5601900 5083 994 2627 2905 8271 8271 SEHLSVRPQTALEENETQK 19 1 1 Unmodified _SEHLSVRPQTALEENETQK_ 0 0 0 1 Q9Y3D9 Q9Y3D9 Q9Y3D9 MRPS23 28S ribosomal protein S23, mitochondrial MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 554.5344 4 549.777736 2195.08184 81558.36 0.65788 0.00036169 -0.10891 -5.9879E-05 0.54896 0.00030181 549.777877484117 554.28328978173 107.33 0.46127 107.33 107.03 107.49 0 123 36 5 0 0 0 0.0022094 2 62530 29.766 29.766 1 1.5192 1.6962 0 16654000 8370800 8283500 5084 1251 2628 2906 8272;8273 8272 SEHPGLSIGDTAK 13 1 0 Unmodified _SEHPGLSIGDTAK_ 0 0 0 0 D6R9A6;Q5U071;P26583 D6R9A6 D6R9A6 HMGB2 High mobility group protein B2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 656.3314 2 656.330598 1310.64664 NaN NaN NaN 0.039008 2.5602E-05 NaN NaN NaN NaN 82.892 0.20486 82.892 82.739 82.944 0 0 0 0 0.0020738 1 44353 64.82 41.391 1 NaN NaN 0 6163300 6163300 0 5085 770 2629 2907 8274 8274 SEHPGLSIGDTAK 13 1 0 Unmodified _SEHPGLSIGDTAK_ 0 0 0 0 D6R9A6;Q5U071;P26583 D6R9A6 D6R9A6 HMGB2 High mobility group protein B2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 656.3309 2 656.330598 1310.64664 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.116 1 82.116 81.616 82.616 7.6294E-06 0 0 0 0.0006892 1 43837 56.359 35.489 1 5086 770 2629 2907 8275 8275 SEHTAPPPEEPTDKSPEAEDPLGVER 26 1 1 Phospho (STY) _SEHTAPPPEEPTDKS(ph)PEAEDPLGVER_ SEHTAPPPEEPTDKS(1)PEAEDPLGVER S(-92.01)EHT(-87.48)APPPEEPT(-37.02)DKS(37.02)PEAEDPLGVER 0 0 1 1 Q96KM6 Q96KM6 Q96KM6 ZNF512B Zinc finger protein 512B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 965.4301 3 965.429107 2893.26549 61677.11 1.1107 0.0010723 0.039283 3.7925E-05 1.15 0.0011102 965.76350394524 971.770755665132 91.373 1.0493 91.373 90.942 91.991 -7.6294E-06 514 89 9 0 0 0 1.0641E-45 1 50465 111.84 101.57 4 0.67414 0.80602 0 110240000 61238000 49006000 5087 1183 2630 2908 8276 8276 2332 SEIPSPQSQLLEDAEANLVGR 21 0 1 Phospho (STY) _SEIPS(ph)PQSQLLEDAEANLVGR_ S(0.001)EIPS(0.989)PQS(0.011)QLLEDAEANLVGR S(-32.11)EIPS(19.59)PQS(-19.59)QLLEDAEANLVGR 0 0 1 0 B7ZLX4;D6W5R0;A4D1I0;Q9ULJ8 B7ZLX4 B7ZLX4 PPP1R9A;hCG_1741805 Neurabin-1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1172.5602 2 1167.05467 2332.09478 NaN NaN NaN 0.4256 0.0004967 NaN NaN NaN NaN 133.46 0.21495 133.46 133.35 133.57 0 0 0 0 1.2612E-47 2 81211 127.76 106.92 3 NaN NaN 0 15568000 0 15568000 5088 412 2631 2909 8277;8278 8277 706 SEISELRR 8 0 2 Unmodified _SEISELRR_ 0 0 0 1 Q13092;A0A024R1X6;CON__P02533;P02533;Q14666;F5GWP8;CON__Q9QWL7;CON__Q04695;Q04695 Q13092;CON__Q04695 CON__Q04695 K14;KRT14;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 495.2724 2 495.272355 988.530158 NaN NaN NaN 0.10267 5.085E-05 NaN NaN NaN NaN 76.932 0.55853 76.932 76.704 77.263 0 0 0 0 0.001255 1 39926 77.058 10.026 1 NaN NaN 0 60205000 60205000 0 + 5089 54;759 2632 2910 8279 8279 SEITELRR 8 0 2 Unmodified _SEITELRR_ 0 0 0 1 CON__P13645;P13645;CON__P02535-1 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 502.2802 2 502.28018 1002.54581 NaN NaN NaN -0.19853 -9.9716E-05 NaN NaN NaN NaN 77.862 1.2318 77.862 77.333 78.564 0 0 0 0 0.0062079 1 40322 70.69 28.798 1 NaN NaN 0 96778000 96778000 0 + 5090 755 2633 2911 8280 8280 SEITELRR 8 0 2 Unmodified _SEITELRR_ 0 0 0 1 CON__P13645;P13645;CON__P02535-1 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 502.2806 2 502.28018 1002.54581 NaN NaN NaN 0.053469 2.6856E-05 NaN NaN NaN NaN 26.14 0.36167 26.14 26.002 26.364 1.9073E-06 0 0 0 0.00069964 1 12233 81.191 34.124 1 NaN NaN 0 16148000 16148000 0 + 5091 755 2633 2911 8281 8281 SEITELRR 8 0 2 Unmodified _SEITELRR_ 0 0 0 1 CON__P13645;P13645;CON__P02535-1 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 335.1889 3 335.189212 1002.54581 NaN NaN NaN -0.48345 -0.00016205 NaN NaN NaN NaN 26.16 0.20745 26.16 26.037 26.245 0 0 0 0 0.025622 1 12296 31.934 15.732 1 NaN NaN 0 2032600 2032600 0 + 5092 755 2633 2911 8282 8282 SELCSSPLGK 10 1 0 Phospho (STY) _SELCS(ph)SPLGK_ SELCS(0.621)S(0.379)PLGK S(-57.94)ELCS(2.15)S(-2.15)PLGK 0 0 1 0 Q9Y2F5 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 583.2555 2 579.249047 1156.48354 80784.43 0.82198 0.00047613 0.091662 5.3095E-05 0.91364 0.00052923 579.249067331178 583.256009488821 52.088 0.99501 52.088 51.62 52.615 3.8147E-06 368 91 6 0 0 0 0.0075103 2 31380 61.344 57.409 3 1.0904 0.8345 0 17230000 8957900 8271800 5093 1246 2634 2912 8283;8284 8283 2560 SELHLLDFQGK 11 1 0 Unmodified _SELHLLDFQGK_ 0 0 0 0 Q9Y3A2 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 643.8416 2 643.840602 1285.66665 NaN NaN NaN NaN NaN NaN NaN NaN NaN 124.75 1 124.75 124.25 125.25 0 0 0 0 0.012826 1 75623 54.608 34.278 1 5094 1249 2635 2913 8285 8285 SEPHSPGIPEIFR 13 0 1 Phospho (STY) _SEPHS(ph)PGIPEIFR_ S(0.001)EPHS(0.999)PGIPEIFR S(-28.85)EPHS(28.85)PGIPEIFR 0 0 1 0 Q8ND82;Q9UJJ2 Q8ND82 Q8ND82 ZNF280C Zinc finger protein 280C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 773.8612 2 773.358506 1544.70246 69525.17 0.90051 0.00069641 0.31377 0.00024266 1.2143 0.00093907 773.358525860292 778.363022463186 112.33 0.9973 112.33 112 113 0 340 92 6 0 0 0 6.5603E-07 2 66560 98.942 76.949 2 0.74908 0.94152 0 42744000 22841000 19902000 5095 1159 2636 2914 8286;8287 8287 2236 SEPHSPGIPEIFR 13 0 1 Phospho (STY) _SEPHS(ph)PGIPEIFR_ S(0.006)EPHS(0.994)PGIPEIFR S(-21.87)EPHS(21.87)PGIPEIFR 0 0 1 0 Q8ND82;Q9UJJ2 Q8ND82 Q8ND82 ZNF280C Zinc finger protein 280C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 519.2442 3 515.908096 1544.70246 85041.98 0.51375 0.00026505 -0.030035 -1.5496E-05 0.48372 0.00024955 515.908076527446 519.24406136079 112.33 1.5088 112.33 112 113.51 0 596 141 6 0 0 0 0.00034796 2 66997 72.898 64.364 2 0.71766 0.90559 0 71450000 38168000 33283000 5096 1159 2636 2914 8288;8289 8289 2236 SEPHSPGIPEIFR 13 0 1 Phospho (STY) _SEPHS(ph)PGIPEIFR_ S(0.002)EPHS(0.998)PGIPEIFR S(-26.6)EPHS(26.6)PGIPEIFR 0 0 1 0 Q8ND82;Q9UJJ2 Q8ND82 Q8ND82 ZNF280C Zinc finger protein 280C MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 778.3635 2 773.358506 1544.70246 68141.5 1.3008 0.001006 -0.26667 -0.00020623 1.0342 0.00079978 773.358405159402 778.362732824375 109.29 1.4014 109.29 108.78 110.19 0 756 138 8 0 0 0 0.0059887 1 70068 47.189 33.836 2 1.3642 0.92191 0 76454000 31343000 45111000 5097 1159 2636 2914 8290 8290 2236 SEPSGEINIDSSGETVGSGER 21 0 1 Phospho (STY) _SEPSGEINIDS(ph)SGETVGSGER_ SEPSGEINIDS(0.622)S(0.357)GET(0.02)VGSGER S(-110.94)EPS(-95.49)GEINIDS(2.41)S(-2.41)GET(-14.98)VGS(-33.5)GER 0 0 1 0 P42695;E9PKK4;G3V1A9 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1094.4595 2 1093.95789 2185.90123 59183.91 0.48014 0.00052526 0.071734 7.8474E-05 0.55188 0.00060373 1093.95793657854 1098.96212908458 75.996 1.0692 75.996 75.485 76.554 0 529 93 8 0 0 0 3.8783E-55 3 39539 133.95 119.79 6 0.89963 1.1353 0 75224000 41869000 33355000 5098 991 2637 2915 8291;8292;8293 8292 1757;1758;2886 SEPSGEINIDSSGETVGSGER 21 0 1 Phospho (STY) _SEPSGEINIDSSGET(ph)VGSGER_ SEPSGEINIDS(0.283)S(0.283)GET(0.346)VGS(0.088)GER S(-38.89)EPS(-31.39)GEINIDS(-0.87)S(-0.87)GET(0.87)VGS(-5.93)GER 0 0 1 0 P42695;E9PKK4;G3V1A9 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1098.9623 2 1093.95789 2185.90123 58513.89 0.85429 0.00093456 -0.20581 -0.00022515 0.64848 0.00070941 1093.95795293294 1098.96202799178 78.896 1.3497 78.896 78.115 79.465 0 913 127 11 0 0 0 1.5729E-05 1 50573 49.528 36.967 6 2.0233 1.34 0 208900000 75952000 132940000 5099 991 2637 2915 8294 8294 1757;1758;2886 SEPSGEINIDSSGETVGSGER 21 0 1 2 Phospho (STY) _SEPSGEINIDS(ph)S(ph)GETVGSGER_ SEPSGEINIDS(0.97)S(0.904)GET(0.125)VGS(0.001)GER S(-93.62)EPS(-83.06)GEINIDS(14.69)S(9.62)GET(-9.62)VGS(-30.81)GER 0 0 2 0 P42695;E9PKK4;G3V1A9 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1138.9458 2 1133.94106 2265.86756 56902.91 0.27859 0.00031591 0.052868 5.9949E-05 0.33146 0.00037586 1133.94110228475 1139.44679996008 78.789 0.9964 78.789 78.282 79.278 0 628 87 9 0 0 0 1.5177E-44 3 41278 121.26 105.84 15 0.81518 1.0303 0 174110000 94411000 79697000 5100 991 2637 2916 8295;8296;8297 8296 1757;1758;2886 SESARGSDSEDEVLR 15 0 2 2 Phospho (STY) _SESARGS(ph)DS(ph)EDEVLR_ SES(0.012)ARGS(0.987)DS(1)EDEVLR S(-34.74)ES(-19.02)ARGS(19.02)DS(52.5)EDEVLR 0 0 2 1 Q8WVC0;B4DNM0 Q8WVC0 Q8WVC0 LEO1 RNA polymerase-associated protein LEO1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 898.8409 2 898.840417 1795.66628 63065.77 0.87837 0.00078952 0.039565 3.5562E-05 0.91794 0.00082508 898.840464661426 908.848722871678 56.266 1.9606 56.266 55.232 57.193 -3.8147E-06 1132 162 10 0 0 0 4.2094E-18 2 24237 111.33 87.576 6 1.1978 1.4965 0 240750000 111330000 129430000 5101 1166 2638 2917 8298;8299 8299 2256;2257;2258 SESARGSDSEDEVLR 15 0 2 2 Phospho (STY) _SESARGS(ph)DS(ph)EDEVLR_ S(0.001)ES(0.007)ARGS(0.992)DS(1)EDEVLR S(-28.53)ES(-21.71)ARGS(21.71)DS(48.9)EDEVLR 0 0 2 1 Q8WVC0;B4DNM0 Q8WVC0 Q8WVC0 LEO1 RNA polymerase-associated protein LEO1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 899.3431 2 898.840417 1795.66628 64521.87 1.0404 0.00093511 -0.062207 -5.5914E-05 0.97814 0.0008792 898.840307140354 908.848763334915 44.352 1.2443 44.352 43.843 45.087 0 857 117 10 0 0 0 1.5161E-06 1 26458 84.653 70.644 6 1.1542 1.0088 0 247660000 110850000 136810000 5102 1166 2638 2917 8300 8300 2256;2257;2258 SESARGSDSEDEVLR 15 0 2 Phospho (STY) _SESARGS(ph)DSEDEVLR_ S(0.003)ES(0.019)ARGS(0.977)DS(0.001)EDEVLR S(-24.59)ES(-17.08)ARGS(17.08)DS(-30.25)EDEVLR 0 0 1 1 Q8WVC0;B4DNM0 Q8WVC0 Q8WVC0 LEO1 RNA polymerase-associated protein LEO1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 858.8572 2 858.857252 1715.69995 64454.17 0.66734 0.00057315 0.29764 0.00025563 0.96498 0.00082878 858.857237160142 868.865269072391 61.698 0.76799 61.698 61.559 62.327 -3.8147E-06 176 51 8 0 0 0 2.479E-06 2 28532 83.418 66.786 4 1.2065 1.4967 0 43564000 19398000 24166000 5103 1166 2638 2918 8301;8302 8302 2256;2257;2258 SESARGSDSEDEVLR 15 0 2 Phospho (STY) _SES(ph)ARGSDSEDEVLR_ SES(0.508)ARGS(0.389)DS(0.103)EDEVLR S(-39.81)ES(1.15)ARGS(-1.15)DS(-6.95)EDEVLR 0 0 1 1 Q8WVC0;B4DNM0 Q8WVC0 Q8WVC0 LEO1 RNA polymerase-associated protein LEO1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 572.9079 3 572.90726 1715.69995 78562.64 0.49473 0.00028343 0.57885 0.00033163 1.0736 0.00061506 572.908163029933 579.579408075819 61.707 0.45216 61.707 61.584 62.036 -3.8147E-06 81 27 7 0 0 0 0.00016351 2 28534 69.148 39.014 4 1.3619 1.6887 0 39341000 15437000 23904000 5104 1166 2638 2918 8303;8304 8303 2256;2257;2258 SESDLEETEPVVIPR 15 0 1 Phospho (STY) _SES(ph)DLEETEPVVIPR_ S(0.067)ES(0.933)DLEETEPVVIPR S(-11.44)ES(11.44)DLEET(-120.08)EPVVIPR 0 0 1 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 890.9075 2 890.406047 1778.79754 63205.16 0.7982 0.00071072 -0.014909 -1.3275E-05 0.78329 0.00069745 890.406029938215 895.410089133582 106.68 0.97743 106.68 106.17 107.15 0 442 75 8 0 0 0 1.0637E-75 2 61935 180.48 163.45 3 0.30664 0.38721 0 106540000 80419000 26118000 5105 1032 2639 2919 8305;8306 8306 1872;1873 SESDLEETEPVVIPR 15 0 1 2 Phospho (STY) _S(ph)ES(ph)DLEETEPVVIPR_ S(1)ES(1)DLEETEPVVIPR S(41.28)ES(41.28)DLEET(-41.28)EPVVIPR 0 0 2 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 930.3892 2 930.389212 1858.76387 63557.25 0.72586 0.00067534 -0.41614 -0.00038717 0.30972 0.00028816 930.388462515165 935.393514891419 115.44 0.76981 115.44 115.08 115.85 7.6294E-06 285 65 8 0 0 0 5.4704E-05 3 68686 73.887 66.759 3 0.5321 0.65396 0 30316000 19653000 10663000 5106 1032 2639 2920 8307;8308;8309 8307 1872;1873 SESDLEETEPVVIPR 15 0 1 2 Phospho (STY) _S(ph)ES(ph)DLEETEPVVIPR_ S(0.997)ES(0.997)DLEET(0.006)EPVVIPR S(25.37)ES(25.37)DLEET(-25.37)EPVVIPR 0 0 2 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 930.8909 2 930.389212 1858.76387 64063.25 0.91068 0.00084729 0.21443 0.0001995 1.1251 0.0010468 930.89055017845 935.393767699891 125.9 0.85947 125.9 125.52 126.38 -7.6294E-06 392 76 7 0 0 0 0.00097349 1 81230 48.741 43.082 3 1.0961 0.83995 0 17671000 8853100 8817500 5107 1032 2639 2920 8310 8310 1872;1873 SESGTDLREHSPSESEK 17 1 1 Phospho (STY) _SESGTDLREHS(ph)PSESEK_ SESGT(0.002)DLREHS(0.877)PS(0.099)ES(0.023)EK S(-59.55)ES(-45.04)GT(-27.34)DLREHS(9.49)PS(-9.49)ES(-15.85)EK 0 0 1 1 A0JLR2;Q12986 A0JLR2 A0JLR2 NFX1 Transcriptional repressor NF-X1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 652.2727 3 652.272379 1953.79531 74467.53 1.1687 0.00076231 -0.54019 -0.00035235 0.6285 0.00040996 652.272048800904 658.27947652041 17.038 0.33316 17.038 16.877 17.21 0 78 11 10 0 0 0 1.7682E-06 1 4265 72.1 54.505 6 1.1503 0.88708 0 56954000 28427000 28527000 5108 396 2640 2921 8311 8311 676 SESHTDLTFSR 11 0 1 Phospho (STY) _SES(ph)HTDLTFSR_ S(0.009)ES(0.983)HT(0.008)DLTFSR S(-20.49)ES(20.49)HT(-21.17)DLT(-36.82)FS(-36.82)R 0 0 1 0 A2I829;Q6NUN2;A3F769;A3F768;O15226 A2I829 A2I829 NKRF;NRF NF-kappa-B-repressing factor MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 685.2891 2 680.282464 1358.55037 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.917 1 67.917 67.417 68.417 0 0 0 0 0.0057333 1 33528 49.448 34.297 5 5109 406 2641 2922 8312 8312 696 SESLIDASEDSQLEAAIR 18 0 1 Phospho (STY) _SESLIDASEDS(ph)QLEAAIR_ SESLIDAS(0.047)EDS(0.953)QLEAAIR S(-65.78)ES(-60.35)LIDAS(-13.09)EDS(13.09)QLEAAIR 0 0 1 0 C9JAT7;B4E126;O94888 C9JAT7 C9JAT7 UBXN7 UBX domain-containing protein 7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1007.4524 2 1007.45426 2012.89396 59929.53 0.25901 0.00026094 0.23761 0.00023938 0.49662 0.00050032 1007.95563674114 1012.45905007156 115.46 0.84837 115.46 115.03 115.87 0 366 72 9 0 0 0 2.1993E-08 1 68742 80.738 64.601 4 0.5502 0.69304 0 54848000 39300000 15549000 5110 679 2642 2923 8313 8313 1123 SESPKEPEQLR 11 1 1 Phospho (STY) _SES(ph)PKEPEQLR_ S(0.002)ES(0.998)PKEPEQLR S(-26.21)ES(26.21)PKEPEQLR 0 0 1 1 F8W6I7;A0A024RC46;A0A024RB53;A0A024RAZ7;P09651;F8VTQ5;Q6IPF2;F8W646;B4DP35;B4E0B5 F8W6I7 F8W6I7 HNRNPA1;hCG_2020860;HNRPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 466.5534 3 460.544935 1378.61297 89291.94 0.005431 2.5012E-06 0.1341 6.1757E-05 0.13953 6.4258E-05 460.544994063985 466.552446114361 53.935 1.632 53.935 53.226 54.858 -3.8147E-06 515 129 6 0 0 0 6.9009E-09 4 23025 105.03 105.03 2 3.6749 4.3529 0 53760000 12800000 40961000 5111 188 2643 2924 8314;8315;8316;8317 8317 301 SESPKEPEQLR 11 1 1 Phospho (STY) _SES(ph)PKEPEQLR_ S(0.007)ES(0.993)PKEPEQLR S(-21.52)ES(21.52)PKEPEQLR 0 0 1 1 F8W6I7;A0A024RC46;A0A024RB53;A0A024RAZ7;P09651;F8VTQ5;Q6IPF2;F8W646;B4DP35;B4E0B5 F8W6I7 F8W6I7 HNRNPA1;hCG_2020860;HNRPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 690.3137 2 690.313764 1378.61297 72823.79 0.59562 0.00041117 -0.17718 -0.00012231 0.41844 0.00028886 690.31340742888 699.324858220562 53.977 1.8143 53.977 53.062 54.877 0 775 145 7 0 0 0 0.00022486 4 23056 88.021 79.488 2 3.3486 4.0051 0 113410000 26583000 86826000 5112 188 2643 2924 8318;8319;8320;8321 8321 301 SESPKEPEQLR 11 1 1 Phospho (STY) _SES(ph)PKEPEQLR_ S(0.006)ES(0.994)PKEPEQLR S(-22.07)ES(22.07)PKEPEQLR 0 0 1 1 F8W6I7;A0A024RC46;A0A024RB53;A0A024RAZ7;P09651;F8VTQ5;Q6IPF2;F8W646;B4DP35;B4E0B5 F8W6I7 F8W6I7 HNRNPA1;hCG_2020860;HNRPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 460.5453 3 460.544935 1378.61297 87620.77 0.34797 0.00016025 -0.10918 -5.0283E-05 0.23879 0.00010997 460.544897173081 466.552313181926 27.545 0.32904 27.545 27.375 27.704 1.9073E-06 120 18 9 0 0 0 6.0894E-09 1 13494 106.58 106.58 2 1.9799 1.5282 0 92799000 32047000 60752000 5113 188 2643 2924 8322 8322 301 SESPKEPEQLRK 12 2 1 Phospho (STY) _SES(ph)PKEPEQLRK_ S(0.004)ES(0.996)PKEPEQLRK S(-24.21)ES(24.21)PKEPEQLRK 0 0 1 2 F8W6I7;A0A024RC46;A0A024RB53;A0A024RAZ7;P09651;F8VTQ5;Q6IPF2;F8W646;B4DP35;B4E0B5 F8W6I7 F8W6I7 HNRNPA1;hCG_2020860;HNRPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 503.2431 3 503.243256 1506.70794 85215.52 0.31403 0.00015803 0.25053 0.00012608 0.56456 0.00028411 503.243397518819 511.922294614208 63.273 2.002 63.273 62.021 64.023 0 842 157 8 0 0 0 1.082E-05 1 29913 91.006 91.006 2 3.5043 4.1504 0 278240000 65000000 213240000 5114 188 2644 2925 8323 8323 301 SESPKEPEQLRK 12 2 1 Phospho (STY) _SES(ph)PKEPEQLRK_ S(0.015)ES(0.985)PKEPEQLRK S(-18.14)ES(18.14)PKEPEQLRK 0 0 1 2 F8W6I7;A0A024RC46;A0A024RB53;A0A024RAZ7;P09651;F8VTQ5;Q6IPF2;F8W646;B4DP35;B4E0B5 F8W6I7 F8W6I7 HNRNPA1;hCG_2020860;HNRPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 511.9228 3 503.243256 1506.70794 NaN NaN NaN 0.30882 0.00015541 NaN NaN NaN NaN 61.989 0.22454 61.989 61.854 62.078 -3.8147E-06 0 0 0 0.0090416 1 28734 44.925 35.013 2 NaN NaN 0 20418000 0 20418000 5115 188 2644 2925 8324 8324 301 SESPKEPEQLRK 12 2 1 Phospho (STY) _SES(ph)PKEPEQLRK_ SES(1)PKEPEQLRK S(-54.31)ES(54.31)PKEPEQLRK 0 0 1 2 F8W6I7;A0A024RC46;A0A024RB53;A0A024RAZ7;P09651;F8VTQ5;Q6IPF2;F8W646;B4DP35;B4E0B5 F8W6I7 F8W6I7 HNRNPA1;hCG_2020860;HNRPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 503.2433 3 503.243256 1506.70794 84318.44 0.33731 0.00016975 -0.5189 -0.00026113 -0.18159 -9.1383E-05 503.243513646815 511.922018525371 19.378 0.80588 19.378 19.15 19.956 0 242 36 12 0 0 0 2.2052E-66 1 6345 181.97 181.97 2 1.8468 1.4507 0 1113600000 344880000 768760000 5116 188 2644 2925 8325 8325 301 SESPKEPEQLRK 12 2 1 Phospho (STY) _SES(ph)PKEPEQLRK_ SES(1)PKEPEQLRK S(-37.87)ES(37.87)PKEPEQLRK 0 0 1 2 F8W6I7;A0A024RC46;A0A024RB53;A0A024RAZ7;P09651;F8VTQ5;Q6IPF2;F8W646;B4DP35;B4E0B5 F8W6I7 F8W6I7 HNRNPA1;hCG_2020860;HNRPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 754.3607 2 754.361245 1506.70794 69335.05 0.81182 0.00061241 -0.39919 -0.00030113 0.41263 0.00031127 754.361088837508 767.379209717452 19.393 0.52946 19.393 19.234 19.763 0 145 23 10 0 0 0 3.8853E-14 1 6415 113.43 98.095 2 1.9339 1.5534 0 269620000 92959000 176660000 5117 188 2644 2925 8326 8326 301 SESPPAELPSLR 12 0 1 Phospho (STY) _S(ph)ESPPAELPSLR_ S(0.54)ES(0.46)PPAELPSLR S(0.69)ES(-0.69)PPAELPS(-38.5)LR 0 0 1 0 Q14669;H7C1L9;G5E9G6 Q14669 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 686.8237 2 681.818682 1361.62281 73937.8 1.1784 0.00080343 0.059733 4.0727E-05 1.2381 0.00084415 681.818823868012 686.822828265868 96.711 1.0677 96.711 96.24 97.307 -7.6294E-06 295 88 5 0 0 0 0.016748 2 54654 41.283 41.283 3 1.0363 1.2831 0 34335000 18331000 16005000 5118 1057 2645 2926 8327;8328 8327 1973;1974 SESPPAELPSLR 12 0 1 Phospho (STY) _SES(ph)PPAELPSLR_ S(0.325)ES(0.675)PPAELPSLR S(-3.17)ES(3.17)PPAELPS(-38.17)LR 0 0 1 0 Q14669;H7C1L9;G5E9G6 Q14669 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 681.8193 2 681.818682 1361.62281 73296.88 1.0482 0.00071466 0.15508 0.00010573 1.2032 0.00082039 681.818846296473 686.822783089725 101.38 1.1837 101.38 100.6 101.78 0 455 110 7 0 0 0 0.011386 3 65212 44.457 44.457 3 2.2126 1.512 0 50511000 11420000 39092000 5119 1057 2645 2926 8329;8330;8331 8331 1973;1974 SESPPPLSDPK 11 1 0 Phospho (STY) _SES(ph)PPPLSDPK_ SES(1)PPPLSDPK S(-57.67)ES(57.67)PPPLS(-86.76)DPK 0 0 1 0 A0A140F1N4;A0A024R8H6;Q15059 A0A140F1N4 A0A140F1N4 BRD3 Bromodomain-containing protein 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 621.2815 2 617.273576 1232.5326 77685.98 0.75276 0.00046466 0.16076 9.9235E-05 0.91352 0.00056389 617.273670153546 621.280727731388 49.008 1.5262 49.008 48.319 49.846 0 935 145 9 0 0 0 4.388E-35 2 29667 162.93 145.45 3 1.2809 0.85622 0 154140000 68663000 85480000 5120 153 2646 2927 8332;8333 8333 236 SESSTSAFSTPTR 13 0 1 2 Phospho (STY) _SESST(ph)SAFST(ph)PTR_ SES(0.001)S(0.056)T(0.742)S(0.11)AFS(0.368)T(0.63)PT(0.093)R S(-62.98)ES(-30.18)S(-11.25)T(7.46)S(-8.28)AFS(-2.92)T(2.92)PT(-8.28)R 0 0 2 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 764.2864 2 759.281476 1516.5484 70113.81 0.96151 0.00073006 0.27701 0.00021033 1.2385 0.00094039 759.281843983272 764.285721988567 47.679 1.6699 47.679 47.093 48.763 0 504 114 7 0 0 0 1.6087E-16 2 18394 119.63 103.49 28 0.53198 0.64943 0 21507000 14200000 7306900 5121 1167 2647 2928 8334;8335 8334 2272;2967;2968 SESSTSAFSTPTR 13 0 1 2 Phospho (STY) _SESSTSAFS(ph)T(ph)PTR_ SESS(0.003)T(0.004)S(0.004)AFS(0.95)T(0.861)PT(0.179)R S(-54.92)ES(-38.68)S(-28.25)T(-26.3)S(-26.3)AFS(12.73)T(7.82)PT(-7.82)R 0 0 2 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-SECPEP 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 759.3176 2 759.281476 1516.5484 69110.56 0.78514 0.00059614 0.47657 0.00036185 1.2617 0.00095799 759.282240319664 764.285596898288 48.337 0.96586 48.337 47.877 48.843 0 424 88 6 0 0 0 0.0073892 1 29022 69.261 53.124 28 1.2105 0.87678 0 26614000 11576000 15039000 5122 1167 2647 2928 8336 8336 2272;2967;2968 SESSTSAFSTPTR 13 0 1 Unmodified _SESSTSAFSTPTR_ 0 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 679.314 2 679.315145 1356.61574 NaN NaN NaN -1.0029 -0.0006813 NaN NaN NaN NaN 59.808 0.34184 59.808 59.678 60.019 3.8147E-06 0 0 0 0.0020231 1 26938 69.721 42.934 1 NaN NaN 0 3384800 3384800 0 5123 1167 2647 2929 8337 8337 SESSTSAFSTPTR 13 0 1 Phospho (STY) _SESSTSAFST(ph)PTR_ SESSTSAFS(0.144)T(0.712)PT(0.144)R S(-132.31)ES(-106.72)S(-87.31)T(-80.34)S(-64.24)AFS(-6.93)T(6.93)PT(-6.93)R 0 0 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 724.3034 2 719.298311 1436.58207 71573.89 1.0266 0.00073844 -0.1065 -7.6607E-05 0.92011 0.00066183 719.29820505147 724.302052362168 39.681 1.3415 39.681 38.844 40.185 0 565 120 9 0 0 0 1.8278E-32 2 22841 153.7 131.23 8 1.103 0.73219 0 186190000 90165000 96024000 5124 1167 2647 2930 8338;8339 8339 2272;2967;2968 SESVVSGLDSPAK 13 1 0 Phospho (STY) _SESVVSGLDS(ph)PAK_ SESVVS(0.213)GLDS(0.787)PAK S(-72.13)ES(-40.77)VVS(-5.67)GLDS(5.67)PAK 0 0 1 0 H7BYJ3;O14578 H7BYJ3 H7BYJ3 CIT Citron Rho-interacting kinase MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 678.3096 2 678.308147 1354.60174 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.826 1 71.826 71.326 72.326 -7.6294E-06 0 0 0 0.0006608 1 36173 84.759 53.329 4 5125 878 2648 2931 8340 8340 1486 SESVVSGLDSPAK 13 1 0 Phospho (STY) _SESVVSGLDS(ph)PAK_ SESVVSGLDS(1)PAK S(-97.98)ES(-76.85)VVS(-33.93)GLDS(33.93)PAK 0 0 1 0 H7BYJ3;O14578 H7BYJ3 H7BYJ3 CIT Citron Rho-interacting kinase MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 682.3157 2 678.308147 1354.60174 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.842 1 71.842 71.342 72.342 0 0 0 0 8.4867E-05 1 36187 111.12 65.955 4 5126 878 2648 2931 8341 8341 1486 SETAPAAPAAAPPAEK 16 1 0 Phospho (STY) _SET(ph)APAAPAAAPPAEK_ S(0.451)ET(0.549)APAAPAAAPPAEK S(-0.85)ET(0.85)APAAPAAAPPAEK 0 0 1 0 P16403 P16403 P16403 HIST1H1C Histone H1.2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 779.8622 2 779.861078 1557.7076 68257.59 0.64359 0.00050191 0.24703 0.00019265 0.89062 0.00069456 779.861204736613 783.8680276219 54.909 1.0512 54.909 54.417 55.469 0 371 82 7 0 0 0 0.00099348 1 23207 55.66 10.853 2 1.577 1.9797 0 28057000 11857000 16200000 5127 967 2649 2932 8342 8342 1716;2878 SETAPAAPAAAPPAEK 16 1 0 Acetyl (Protein N-term),Phospho (STY) _(ac)S(ph)ETAPAAPAAAPPAEK_ S(0.847)ET(0.153)APAAPAAAPPAEK S(7.44)ET(-7.44)APAAPAAAPPAEK 1 0 1 0 P16403 P16403 P16403 HIST1H1C Histone H1.2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 801.3684 2 800.86636 1599.71817 67853.33 0.70457 0.00056427 -0.046128 -3.6942E-05 0.65844 0.00052732 800.866365831355 804.873478659574 65.756 1.0363 65.756 65.286 66.323 0 478 79 8 0 0 0 3.3358E-10 4 31520 91.076 14.719 2 1.4021 1.7342 0 297990000 123730000 174260000 5128 967 2649 2933 8343;8344;8345;8346 8343 1716;2878 SETAPAAPAAPAPAEK 16 1 0 Unmodified _SETAPAAPAAPAPAEK_ 0 0 0 0 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412 Q4VB24 Q4VB24 HIST1H1E Histone H1.4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 743.8858 2 739.877913 1477.74127 72613.54 1.0999 0.0008138 0.37282 0.00027584 1.4727 0.0010896 739.878494163853 743.884985114611 40.87 0.73361 40.87 40.589 41.323 0 218 65 5 0 0 0 0.0043511 1 23761 40.767 0 1 0.45034 0.33509 0 9336700 6365500 2971200 5129 410 2650 2934 8347 8347 SETAPAAPAAPAPAEKTPVK 20 2 0 Acetyl (Protein N-term),Phospho (STY) _(ac)SETAPAAPAAPAPAEKT(ph)PVK_ S(0.001)ET(0.001)APAAPAAPAPAEKT(0.999)PVK S(-32.3)ET(-32.18)APAAPAAPAPAEKT(32.18)PVK 1 0 1 1 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412 Q4VB24 Q4VB24 HIST1H1E Histone H1.4 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1013.4991 2 1013.49827 2024.98199 NaN NaN NaN 0.10464 0.00010605 NaN NaN NaN NaN 70.166 0.75472 70.166 69.796 70.551 0 0 0 0 0.00029227 1 34815 41.227 30.321 3 NaN NaN 0 43298000 43298000 0 5130 410 2651 2935 8348 8348 2718;2719 SETAPAAPAAPAPAEKTPVK 20 2 0 Acetyl (Protein N-term),Phospho (STY) _(ac)SETAPAAPAAPAPAEKT(ph)PVK_ SETAPAAPAAPAPAEKT(1)PVK S(-47.21)ET(-47.09)APAAPAAPAPAEKT(47.09)PVK 1 0 1 1 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412 Q4VB24 Q4VB24 HIST1H1E Histone H1.4 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1021.5124 2 1013.49827 2024.98199 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.142 1 70.142 69.642 70.642 7.6294E-06 0 0 0 0.0003842 1 35028 56.139 41.263 3 5131 410 2651 2935 8349 8349 2718;2719 SETAPAAPAAPAPAEKTPVK 20 2 0 Acetyl (Protein N-term),2 Phospho (STY) _(ac)SET(ph)APAAPAAPAPAEKT(ph)PVK_ S(0.441)ET(0.559)APAAPAAPAPAEKT(1)PVK S(-1.04)ET(1.04)APAAPAAPAPAEKT(44.34)PVK 1 0 2 1 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412 Q4VB24 Q4VB24 HIST1H1E Histone H1.4 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1053.9838 2 1053.48144 2104.94832 NaN NaN NaN -0.25168 -0.00026514 NaN NaN NaN NaN 73.141 0.47204 73.141 72.896 73.368 0 0 0 0 0.0010322 1 37103 45.885 21.844 3 NaN NaN 0 12850000 12850000 0 5132 410 2651 2936 8350 8350 2718;2719 SETAPAAPAAPAPAEKTPVKK 21 3 0 Acetyl (Protein N-term),Phospho (STY) _(ac)SETAPAAPAAPAPAEKT(ph)PVKK_ SETAPAAPAAPAPAEKT(1)PVKK S(-53.64)ET(-53.64)APAAPAAPAPAEKT(53.64)PVKK 1 0 1 2 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412 Q4VB24 Q4VB24 HIST1H1E Histone H1.4 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 719.0352 3 718.699593 2153.07695 NaN NaN NaN 0.11971 8.6039E-05 NaN NaN NaN NaN 65.895 0.41209 65.895 65.627 66.039 0 0 0 0 2.81E-10 1 31772 62.605 52.914 3 NaN NaN 0 15807000 15807000 0 5133 410 2652 2937 8351 8351 2718;2719 SETAPAETATPAPVEK 16 1 0 Acetyl (Protein N-term),Phospho (STY) _(ac)SET(ph)APAETATPAPVEK_ S(0.114)ET(0.886)APAETATPAPVEK S(-8.9)ET(8.9)APAET(-44.4)AT(-53.21)PAPVEK 1 0 1 0 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 864.8943 2 860.88749 1719.76043 65901.77 0.67624 0.00058217 0.17157 0.0001477 0.84781 0.00072987 860.887664394293 864.894649169563 59.208 1.5837 59.208 58.252 59.836 -3.8147E-06 736 126 9 0 0 0 1.9725E-06 2 26222 74.46 67.801 4 0.51335 0.63666 0 118350000 74369000 43984000 5134 966 2653 2938 8352;8353 8352 1712;2876;2877 SETAPAETATPAPVEK 16 1 0 Acetyl (Protein N-term),Phospho (STY) _(ac)S(ph)ETAPAETATPAPVEK_ S(0.892)ET(0.108)APAETATPAPVEK S(9.17)ET(-9.17)APAET(-64.8)AT(-71.42)PAPVEK 1 0 1 0 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 861.389 2 860.88749 1719.76043 64584.91 0.71747 0.00061766 0.255 0.00021953 0.97247 0.00083719 860.887559003147 864.894866378336 63.251 1.0145 63.251 62.452 63.467 0 472 85 7 0 0 0 3.2912E-16 3 29735 107.61 91.719 4 0.51666 0.6407 0 120060000 77557000 42501000 5135 966 2653 2938 8354;8355;8356 8356 1712;2876;2877 SETAPAETATPAPVEK 16 1 0 Acetyl (Protein N-term),Phospho (STY) _(ac)S(ph)ETAPAETATPAPVEK_ S(0.569)ET(0.431)APAETATPAPVEK S(1.21)ET(-1.21)APAET(-41.11)AT(-42.65)PAPVEK 1 0 1 0 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 864.8956 2 860.88749 1719.76043 64584.88 0.73986 0.00063694 -0.20252 -0.00017435 0.53734 0.00046259 860.887506342168 864.893740818383 63.97 2.363 63.97 62.786 65.149 0 818 181 9 0 0 0 1.5496E-11 2 29962 93.478 83.736 4 0.5455 0.67462 0 318770000 207840000 110930000 5136 966 2653 2938 8357;8358 8357 1712;2876;2877 SETAPAETATPAPVEK 16 1 0 Acetyl (Protein N-term),Phospho (STY) _(ac)SET(ph)APAETATPAPVEK_ S(0.437)ET(0.563)APAETATPAPVEK S(-1.1)ET(1.1)APAET(-93.44)AT(-101.71)PAPVEK 1 0 1 0 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 860.8884 2 860.88749 1719.76043 64999.6 0.65475 0.00056367 0.052241 4.4974E-05 0.707 0.00060864 860.88764043481 864.894555944527 72.409 1.6137 72.409 71.789 73.402 0 1001 137 12 0 0 0 2.7429E-22 4 36792 114.69 105.74 4 0.51046 0.62972 0 996420000 650790000 345620000 5137 966 2653 2938 8359;8360;8361;8362 8361 1712;2876;2877 SETAPAETATPAPVEK 16 1 0 Acetyl (Protein N-term),Phospho (STY) _(ac)S(ph)ETAPAETATPAPVEK_ S(0.543)ET(0.457)APAETATPAPVEK S(0.75)ET(-0.75)APAET(-41.27)AT(-47.84)PAPVEK 1 0 1 0 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 860.8893 2 860.88749 1719.76043 65543.55 1.1362 0.0009781 0.18296 0.00015751 1.3191 0.0011356 860.887651748138 864.894356965109 56.256 2.3077 56.256 54.805 57.112 0 1199 197 9 0 0 0 0.00014275 3 34599 61.375 55.143 4 0.13687 0.09148 0 166470000 148170000 18302000 5138 966 2653 2938 8363;8364;8365 8364 1712;2876;2877 SETAPAETATPAPVEK 16 1 0 Acetyl (Protein N-term),Phospho (STY) _(ac)SET(ph)APAETATPAPVEK_ S(0.451)ET(0.548)APAETATPAPVEK S(-0.85)ET(0.85)APAET(-33.88)AT(-40.21)PAPVEK 1 0 1 0 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 860.8883 2 860.88749 1719.76043 65842.26 0.90863 0.00078223 -0.0075697 -6.5166E-06 0.90106 0.00077571 860.887603912819 864.89440966841 61.85 3.8912 61.85 60.485 64.376 0 2075 358 10 0 0 0 2.3452E-06 3 37819 73.022 64.293 4 0.13029 0.086872 0 723290000 634170000 89118000 5139 966 2653 2938 8366;8367;8368 8366 1712;2876;2877 SETAPAETATPAPVEK 16 1 0 Acetyl (Protein N-term),Phospho (STY) _(ac)S(ph)ETAPAETATPAPVEK_ S(0.856)ET(0.143)APAET(0.001)AT(0.001)PAPVEK S(7.78)ET(-7.78)APAET(-30.64)AT(-31.55)PAPVEK 1 0 1 0 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 860.8886 2 860.88749 1719.76043 NaN NaN NaN -0.4125 -0.00035512 NaN NaN NaN NaN 57.577 0.90639 57.577 57.089 57.995 0 0 0 0 1.1096E-05 1 35400 56.599 42.92 4 NaN NaN 0 20903000 20903000 0 5140 966 2653 2938 8369 8369 1712;2876;2877 SETAPAETATPAPVEK 16 1 0 Acetyl (Protein N-term),Phospho (STY) _(ac)S(ph)ETAPAETATPAPVEK_ S(0.623)ET(0.332)APAET(0.037)AT(0.007)PAPVEK S(2.74)ET(-2.74)APAET(-12.22)AT(-19.33)PAPVEK 1 0 1 0 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 860.8882 2 860.88749 1719.76043 NaN NaN NaN -0.10317 -8.8816E-05 NaN NaN NaN NaN 58.098 2.5358 58.098 57.949 60.485 0 0 0 0 0.00026088 1 35914 47.545 33.866 4 NaN NaN 0 16716000 16716000 0 5141 966 2653 2938 8370 8370 1712;2876;2877 SETAPAETATPAPVEK 16 1 0 Acetyl (Protein N-term) _(ac)SETAPAETATPAPVEK_ 1 0 0 0 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 820.9055 2 820.904325 1639.7941 68130.02 0.74561 0.00061208 0.14272 0.00011716 0.88834 0.00072924 821.406130979263 824.911530339166 62.307 0.86813 62.307 61.84 62.708 0 294 64 7 0 0 0 9.9565E-06 2 28850 71.558 59.826 1 0.4896 0.61792 0 30609000 20580000 10029000 5142 966 2653 2939 8371;8372 8372 SETAPAETATPAPVEK 16 1 0 Acetyl (Protein N-term) _(ac)SETAPAETATPAPVEK_ 1 0 0 0 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 820.9062 2 820.904325 1639.7941 NaN NaN NaN 0.085804 7.0437E-05 NaN NaN NaN NaN 68.007 0.59641 68.007 67.652 68.249 0 0 0 0 7.6799E-08 1 33479 81.709 61.282 1 NaN NaN 0 9392400 9392400 0 5143 966 2653 2939 8373 8373 SETAPAETATPAPVEK 16 1 0 Acetyl (Protein N-term) _(ac)SETAPAETATPAPVEK_ 1 0 0 0 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 820.9051 2 820.904325 1639.7941 NaN NaN NaN 0.017338 1.4233E-05 NaN NaN NaN NaN 68.692 0.88388 68.692 68.17 69.054 0 0 0 0 0.0018626 1 43001 43.382 28.117 1 NaN NaN 0 5865800 5865800 0 5144 966 2653 2939 8374 8374 SETAPAETATPAPVEK 16 1 0 Unmodified _SETAPAETATPAPVEK_ 0 0 0 0 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 799.8992 2 799.899042 1597.78353 NaN NaN NaN 0.20264 0.00016209 NaN NaN NaN NaN 59.692 0.58106 59.692 59.506 60.087 0 0 0 0 0.0066963 1 26907 40.066 27.058 1 NaN NaN 0 5685500 5685500 0 5145 966 2653 2940 8375 8375 SETAPAETATPAPVEK 16 1 0 Phospho (STY) _SETAPAETAT(ph)PAPVEK_ S(0.05)ET(0.069)APAET(0.088)AT(0.792)PAPVEK S(-11.97)ET(-10.58)APAET(-9.53)AT(9.53)PAPVEK 0 0 1 0 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 839.8831 2 839.882207 1677.74986 66986.34 1.0964 0.00092085 0.045256 3.801E-05 1.1417 0.00095886 839.882164066505 843.889137285309 40.085 1.3218 40.085 39.487 40.808 0 480 121 7 0 0 0 0.0012672 1 23460 52.823 46.583 4 0.1606 0.10456 0 40626000 32623000 8003300 5146 966 2653 2941 8376 8376 1712;2876;2877 SETAPAETATPAPVEK 16 1 0 Phospho (STY) _SET(ph)APAETATPAPVEK_ S(0.452)ET(0.548)APAETATPAPVEK S(-0.83)ET(0.83)APAET(-55.66)AT(-64.02)PAPVEK 0 0 1 0 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 843.8896 2 839.882207 1677.74986 66698 1.1753 0.0009871 -0.041373 -3.4749E-05 1.1339 0.00095235 839.882202045137 843.889245217779 56.675 1.5008 56.675 55.951 57.452 3.8147E-06 853 127 10 0 0 0 1.3913E-05 4 35038 77.222 77.222 4 0.16305 0.10889 0 281010000 242740000 38273000 5147 966 2653 2941 8377;8378;8379;8380 8380 1712;2876;2877 SETAPAETATPAPVEKSPAK 20 2 0 Acetyl (Protein N-term),Phospho (STY) _(ac)SETAPAETATPAPVEKS(ph)PAK_ SETAPAET(0.002)AT(0.015)PAPVEKS(0.983)PAK S(-44.41)ET(-44.29)APAET(-26.48)AT(-18.28)PAPVEKS(18.28)PAK 1 0 1 1 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1052.4967 2 1052.49592 2102.9773 61475.27 0.3655 0.00038469 0.16646 0.00017519 0.53196 0.00055988 1052.49575149758 1060.51055255812 65.749 0.7346 65.749 65.339 66.074 0 291 56 7 0 0 0 1.1687E-06 2 31467 53.453 53.453 5 0.46378 0.58374 0 54064000 36342000 17722000 5148 966 2654 2942 8381;8382 8381 1712;1713;2876;2877 SETAPAETATPAPVEKSPAK 20 2 0 Acetyl (Protein N-term),Phospho (STY) _(ac)SETAPAETATPAPVEKS(ph)PAK_ SETAPAET(0.001)AT(0.004)PAPVEKS(0.995)PAK S(-42.91)ET(-42.73)APAET(-31.65)AT(-23.88)PAPVEKS(23.88)PAK 1 0 1 1 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 702.3345 3 701.999708 2102.9773 71472.61 0.96702 0.00067885 -0.1793 -0.00012587 0.78772 0.00055298 702.333950835753 707.341845420792 44.821 3.8007 44.821 42.854 46.655 0 2088 348 9 0 0 0 3.3598E-07 1 26002 54.855 54.855 5 0.28412 0.21166 0 136280000 107160000 29117000 5149 966 2654 2942 8383 8383 1712;1713;2876;2877 SETAPAETATPAPVEKSPAK 20 2 0 Acetyl (Protein N-term),Phospho (STY) _(ac)SETAPAETATPAPVEKS(ph)PAK_ SETAPAET(0.01)AT(0.079)PAPVEKS(0.911)PAK S(-50.99)ET(-41.02)APAET(-19.52)AT(-10.63)PAPVEKS(10.63)PAK 1 0 1 1 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 702.0005 3 701.999708 2102.9773 72294.85 0.8384 0.00058856 -0.133 -9.3368E-05 0.7054 0.00049519 702.333859711218 707.342484965557 48.449 2.9299 48.449 46.485 49.415 0 1652 275 13 0 0 0 1.0656E-08 2 29711 67.778 56.156 5 0.2544 0.18636 0 477550000 383570000 93978000 5150 966 2654 2942 8384;8385 8385 1712;1713;2876;2877 SETAPAETATPAPVEKSPAK 20 2 0 Acetyl (Protein N-term),Phospho (STY) _(ac)SETAPAETATPAPVEKS(ph)PAK_ SETAPAET(0.001)AT(0.001)PAPVEKS(0.998)PAK S(-48.47)ET(-48.47)APAET(-32.68)AT(-29.39)PAPVEKS(29.39)PAK 1 0 1 1 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1052.9977 2 1052.49592 2102.9773 59676.55 0.47315 0.00049799 0.24679 0.00025974 0.71993 0.00075773 1052.49630442244 1060.51011741974 48.436 2.3806 48.436 46.994 49.375 0 1202 223 11 0 0 0 2.5803E-09 2 29061 70.907 60.807 5 0.25369 0.18696 0 305430000 241430000 64007000 5151 966 2654 2942 8386;8387 8386 1712;1713;2876;2877 SETAPAETATPAPVEKSPAK 20 2 0 Acetyl (Protein N-term),Phospho (STY) _(ac)SETAPAETATPAPVEKS(ph)PAK_ SETAPAETATPAPVEKS(1)PAK S(-117.68)ET(-117.68)APAET(-51.06)AT(-37.66)PAPVEKS(37.66)PAK 1 0 1 1 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1052.9983 2 1052.49592 2102.9773 59349.22 0.75989 0.00079979 -1.043 -0.0010977 -0.28306 -0.00029792 1052.99670437669 1060.50860287373 65.991 4.9372 65.991 64.926 69.863 0 3109 441 15 0 0 0 2.9207E-47 4 40862 131.67 120.85 5 0.25991 0.18336 0 7995800000 6343900000 1652000000 5152 966 2654 2942 8388;8389;8390;8391 8388 1712;1713;2876;2877 SETAPAETATPAPVEKSPAK 20 2 0 Acetyl (Protein N-term),Phospho (STY) _(ac)SETAPAETATPAPVEKS(ph)PAK_ SETAPAETAT(0.005)PAPVEKS(0.995)PAK S(-36.69)ET(-36.69)APAET(-34.22)AT(-23.4)PAPVEKS(23.4)PAK 1 0 1 1 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1052.9976 2 1052.49592 2102.9773 NaN NaN NaN 0.35104 0.00036947 NaN NaN NaN NaN 45.002 3.1272 45.002 43.272 46.4 0 0 0 0 3.7462E-11 1 26519 68.49 52.183 5 NaN NaN 0 32724000 32724000 0 5153 966 2654 2942 8392 8392 1712;1713;2876;2877 SETAPAETATPAPVEKSPAK 20 2 0 Phospho (STY) _SETAPAETATPAPVEKS(ph)PAK_ SETAPAET(0.003)AT(0.003)PAPVEKS(0.994)PAK S(-48.51)ET(-39.04)APAET(-25.03)AT(-25.03)PAPVEKS(25.03)PAK 0 0 1 1 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 688.3318 3 687.996187 2060.96673 73144.98 0.91351 0.00062849 0.24734 0.00017017 1.1608 0.00079866 688.33067179204 693.339206441599 30.715 2.5776 30.715 30.249 32.826 0 989 193 11 0 0 0 6.5502E-06 2 16844 51.234 51.234 5 0.26684 0.19838 0 158780000 123030000 35749000 5154 966 2654 2943 8393;8394 8394 1712;1713;2876;2877 SETAPAETATPAPVEKSPAK 20 2 0 Phospho (STY) _SETAPAETATPAPVEKS(ph)PAK_ SETAPAETATPAPVEKS(1)PAK S(-100.1)ET(-97.05)APAET(-53.28)AT(-33.94)PAPVEKS(33.94)PAK 0 0 1 1 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1031.9937 2 1031.49064 2060.96673 59458.11 0.44124 0.00045514 0.45588 0.00047024 0.89712 0.00092537 1031.99251012676 1039.50520902146 44.115 2.6785 44.115 42.737 45.416 0 1902 241 10 0 0 0 1.2785E-28 2 25720 111.45 100.54 5 0.26504 0.194 0 508270000 400170000 108100000 5155 966 2654 2943 8395;8396 8395 1712;1713;2876;2877 SETAPAETATPAPVEKSPAK 20 2 0 Phospho (STY) _SETAPAETATPAPVEKS(ph)PAK_ SET(0.001)APAET(0.015)AT(0.057)PAPVEKS(0.927)PAK S(-42.32)ET(-30.69)APAET(-17.77)AT(-12.11)PAPVEKS(12.11)PAK 0 0 1 1 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 693.3393 3 687.996187 2060.96673 72779.02 0.92137 0.0006339 0.15884 0.00010928 1.0802 0.00074318 688.330711121925 693.338719768997 44.042 2.8785 44.042 42.702 45.581 0 2088 260 11 0 0 0 2.1298E-05 1 25849 45.094 45.094 5 0.27055 0.19762 0 594450000 467300000 127160000 5156 966 2654 2943 8397 8397 1712;1713;2876;2877 SETAPAETATPAPVEKSPAK 20 2 0 Acetyl (Protein N-term),2 Phospho (STY) _(ac)SET(ph)APAETATPAPVEKS(ph)PAK_ S(0.379)ET(0.621)APAETAT(0.039)PAPVEKS(0.961)PAK S(-2.16)ET(2.16)APAET(-41.83)AT(-14.06)PAPVEKS(14.06)PAK 1 0 2 1 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1092.9813 2 1092.47909 2182.94363 57794.02 0.75442 0.00082419 -0.12056 -0.0001317 0.63387 0.00069248 1092.98033866767 1100.49313291681 75.881 1.5068 75.881 75.367 76.874 0 859 134 11 0 0 0 9.6483E-10 1 48604 71.428 71.428 10 0.10751 0.07795 0 1033000000 930470000 102530000 5157 966 2654 2944 8398 8398 1712;1713;2876;2877 SETAPAETATPAPVEKSPAKK 21 3 0 Phospho (STY) _SETAPAETATPAPVEKS(ph)PAKK_ SETAPAET(0.001)AT(0.006)PAPVEKS(0.993)PAKK S(-59.79)ET(-48.07)APAET(-28.47)AT(-22.42)PAPVEKS(22.42)PAKK 0 0 1 2 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 739.0435 3 730.694508 2189.06169 69870.38 0.95203 0.00069564 -0.26439 -0.00019319 0.68764 0.00050246 731.028610242918 738.708547629765 30.421 1.0997 30.421 30.088 31.188 1.9073E-06 597 81 11 0 0 0 9.2091E-13 2 16023 66.017 64.27 5 0.30175 0.26045 0 250140000 195670000 54464000 5158 966 2655 2945 8399;8400 8400 1712;1713;2876;2877 SETAPAETATPAPVEKSPAKK 21 3 0 Phospho (STY) _SETAPAETATPAPVEKS(ph)PAKK_ SETAPAET(0.003)AT(0.011)PAPVEKS(0.986)PAKK S(-44.64)ET(-41.11)APAET(-25.83)AT(-19.41)PAPVEKS(19.41)PAKK 0 0 1 2 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 548.5244 4 548.2727 2189.06169 79695.3 0.78411 0.00042991 -0.068457 -3.7533E-05 0.71565 0.00039237 548.523446905835 554.53397809791 30.416 0.78202 30.416 30.119 30.901 0 386 58 10 0 0 0 6.14E-07 1 15856 49.618 41.906 5 0.27545 0.24458 0 53188000 42661000 10528000 5159 966 2655 2945 8401 8401 1712;1713;2876;2877 SETAPAETATPAPVEKSPAKK 21 3 0 Acetyl (Protein N-term),Phospho (STY) _(ac)SETAPAETATPAPVEKS(ph)PAKK_ SETAPAETAT(0.007)PAPVEKS(0.993)PAKK S(-71.91)ET(-72.1)APAET(-37.85)AT(-21.81)PAPVEKS(21.81)PAKK 1 0 1 2 P16401;Q14463 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 745.0336 3 744.698029 2231.07226 69583.21 1.1168 0.00083164 -0.22899 -0.00017053 0.88776 0.00066112 745.032260512108 752.711827938216 50.599 2.2979 50.599 49.637 51.935 0 1708 211 13 0 0 0 2.4121E-15 2 30563 77.939 71.712 5 0.27994 0.23554 0 1008700000 790890000 217770000 5160 966 2655 2946 8402;8403 8403 1712;1713;2876;2877 SEVQQPVHPK 10 1 0 Unmodified _SEVQQPVHPK_ 0 0 0 0 B4DN52;Q53GG0;Q9UHB6;F8VQE1;F8VS07;B3KTW2;F8VRN8 B4DN52 B4DN52 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 383.5399 3 383.540134 1147.59857 97143.07 0.069256 2.6562E-05 -0.0098059 -3.761E-06 0.05945 2.2801E-05 383.540054025734 386.211436732596 60.424 0.22618 60.424 60.306 60.533 0 39 13 4 0 0 0 0.027295 1 27494 26.673 18.748 1 2.4366 2.8895 0 7768900 2426000 5342900 5161 644 2656 2947 8404 8404 SEVQQPVHPKPLSPDSR 17 1 1 Phospho (STY) _SEVQQPVHPKPLS(ph)PDSR_ SEVQQPVHPKPLS(0.94)PDS(0.06)R S(-51.96)EVQQPVHPKPLS(11.92)PDS(-11.92)R 0 0 1 1 B4DN52;Q53GG0;Q9UHB6;F8VQE1;F8VS07;B3KTW2;F8VRN8 B4DN52 B4DN52 LIMA1 LIM domain and actin-binding protein 1 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 666.9972 3 660.989478 1979.9466 NaN NaN NaN 0.13472 8.9046E-05 NaN NaN NaN NaN 45.481 2.6888 45.481 44.034 46.722 0 0 0 0 7.5222E-06 3 26548 56.766 37.76 3 NaN NaN 0 91372000 0 91372000 5162 644 2657 2948 8405;8406;8407 8405 1069 SEYSSGMEADIAK 13 1 0 Oxidation (M) _SEYSSGM(ox)EADIAK_ SEYSSGM(1)EADIAK SEYSSGM(44.86)EADIAK 0 1 0 0 F8WAJ0;Q9H8H2 F8WAJ0 F8WAJ0 DDX31 Probable ATP-dependent RNA helicase DDX31 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 706.3118 2 702.303389 1402.59223 72583.8 0.96092 0.00067486 1.611 0.0011314 2.572 0.0018063 702.304331154355 706.311218588945 77.333 1.2767 77.333 76.891 78.168 0 262 113 4 0 0 0 0.014015 2 40015 44.863 34.034 1 0.70456 0.89372 0 37016000 21545000 15471000 5163 835 2658 2949 8408;8409 8408 228 SFDASDTLALPR 12 0 1 Phospho (STY) _S(ph)FDASDTLALPR_ S(1)FDASDTLALPR S(63.42)FDAS(-63.42)DT(-82.29)LALPR 0 0 1 0 Q5JXC2 Q5JXC2 Q5JXC2 MIIP Migration and invasion-inhibitory protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 686.8111 2 686.810857 1371.60716 76910.64 0.61722 0.00042391 -0.065732 -4.5145E-05 0.55149 0.00037877 686.81085018795 691.814991987369 109.85 0.66741 109.85 109.42 110.09 0 113 48 5 0 0 0 1.0767E-13 3 64568 112.5 96.743 3 0.48795 0.55922 0 11704000 7094200 4609500 5164 1096 2659 2950 8410;8411;8412 8410 2066 SFDASDTLALPR 12 0 1 Phospho (STY) _S(ph)FDASDTLALPR_ S(1)FDASDTLALPR S(37.83)FDAS(-37.83)DT(-46.65)LALPR 0 0 1 0 Q5JXC2 Q5JXC2 Q5JXC2 MIIP Migration and invasion-inhibitory protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 691.8144 2 686.810857 1371.60716 77090.52 1.1148 0.00076564 -0.45449 -0.00031215 0.66028 0.00045349 686.810723657633 691.814379475416 116.58 0.64583 116.58 116.23 116.87 -7.6294E-06 205 62 5 0 0 0 0.00038511 1 75180 84.892 71.303 3 2.6782 2.1764 0 6812500 2097700 4714900 5165 1096 2659 2950 8413 8413 2066 SFDEQNVPK 9 1 0 Phospho (STY) _S(ph)FDEQNVPK_ S(1)FDEQNVPK S(92.43)FDEQNVPK 0 0 1 0 O95425 O95425 O95425 SVIL Supervillin ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 576.2472 2 572.239536 1142.46452 NaN NaN NaN 0.40841 0.00023371 NaN NaN NaN NaN 48.956 0.65721 48.956 48.579 49.236 0 0 0 0 3.7334E-07 1 29453 92.428 74.369 1 NaN NaN 0 6093900 0 6093900 5166 948 2660 2951 8414 8414 1643 SFDFEIETK 9 1 0 Unmodified _SFDFEIETK_ 0 0 0 0 A0A024R4Z6;Q08945 A0A024R4Z6 A0A024R4Z6 SSRP1 FACT complex subunit SSRP1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 558.2679 2 558.266404 1114.51826 NaN NaN NaN 0.52434 0.00029272 NaN NaN NaN NaN 104.2 0.37497 104.2 104.03 104.41 0 0 0 0 0.0002756 1 60308 78.334 50.16 1 NaN NaN 0 3906700 3906700 0 5167 99 2661 2952 8415 8415 SFEDPPNHAR 10 0 1 Unmodified _SFEDPPNHAR_ 0 0 0 0 Q59FP7;A0A024R7E3;P26358;I6L9H2;B3KVA0 Q59FP7 Q59FP7 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 393.852 3 390.515988 1168.52613 97916.72 -0.2593 -0.00010126 0.30602 0.0001195 0.046712 1.8242E-05 390.516064111946 393.85215142724 64.96 0.31718 64.96 64.776 65.093 0 84 22 6 0 0 0 0.008151 1 31099 43.282 36.394 1 0.58958 0.72698 0 32361000 21795000 10566000 5168 133 2662 2953 8416 8416 SFHTYDVQK 9 1 0 Unmodified _SFHTYDVQK_ 0 0 0 0 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 A0A0A0MTB8 WDR36 WD repeat-containing protein 36 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 562.9086 2 562.772188 1123.52982 81114.25 0.70923 0.00039913 -0.35671 -0.00020074 0.35252 0.00019839 562.771963454754 566.7791372645 78.769 1.0539 78.769 78.202 79.255 0 370 92 5 0 0 0 0.00037168 1 41380 110.55 69.775 1 0.92785 1.1758 0 42420000 22572000 19848000 5169 296 2663 2954 8417 8417 SFISPIPSK 9 1 0 Phospho (STY) _SFIS(ph)PIPSK_ SFIS(1)PIPSK S(-56.67)FIS(45.17)PIPS(-45.17)K 0 0 1 0 W5ZR30;Q9UGU0 W5ZR30 W5ZR30 TCF20 Transcription factor 20 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 528.2634 2 528.262283 1054.51001 NaN NaN NaN 0.086362 4.5622E-05 NaN NaN NaN NaN 100.77 1.047 100.77 100.13 101.18 0 0 0 0 1.5679E-07 1 57431 94.363 46.657 3 NaN NaN 0 21743000 21743000 0 5170 1227 2664 2955 8418 8418 2499 SFISPIPSK 9 1 0 Phospho (STY) _SFIS(ph)PIPSK_ SFIS(0.996)PIPS(0.004)K S(-41.01)FIS(23.72)PIPS(-23.72)K 0 0 1 0 W5ZR30;Q9UGU0 W5ZR30 W5ZR30 TCF20 Transcription factor 20 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 532.2707 2 528.262283 1054.51001 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.45 1 100.45 99.953 100.95 0 0 0 0 0.0032838 1 57526 64.439 13.171 3 5171 1227 2664 2955 8419 8419 2499 SFISPIPSK 9 1 0 Phospho (STY) _SFIS(ph)PIPSK_ SFIS(1)PIPSK S(-58.59)FIS(43.3)PIPS(-43.3)K 0 0 1 0 W5ZR30;Q9UGU0 W5ZR30 W5ZR30 TCF20 Transcription factor 20 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 532.2698 2 528.262283 1054.51001 84403.63 0.88181 0.00046583 -0.17514 -9.2522E-05 0.70666 0.0003733 528.262094266597 532.269217458609 103.77 1.2982 103.77 103.21 104.5 0 450 125 5 0 0 0 0.00023691 4 66980 86.014 33.525 3 2.055 1.5701 0 17471000 5386500 12085000 5172 1227 2664 2955 8420;8421;8422;8423 8422 2499 SFLSEPSSPGR 11 0 1 Phospho (STY) _SFLSEPS(ph)SPGR_ SFLS(0.005)EPS(0.497)S(0.497)PGR S(-61.78)FLS(-19.64)EPS(0)S(0)PGR 0 0 1 0 H0YC41;Q69YN4 H0YC41 H0YC41 KIAA1429 Protein virilizer homolog MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 627.2768 2 622.271368 1242.52818 NaN NaN NaN NaN NaN NaN NaN NaN NaN 74.752 1 74.752 74.252 75.252 0 0 0 0 0.00017711 1 38343 76.655 44.647 4 5173 856 2665 2956 8424 8424 1463;1464 SFLSEPSSPGR 11 0 1 Phospho (STY) _SFLSEPS(ph)SPGR_ SFLS(0.006)EPS(0.497)S(0.497)PGR S(-45.44)FLS(-19.09)EPS(0)S(0)PGR 0 0 1 0 H0YC41;Q69YN4 H0YC41 H0YC41 KIAA1429 Protein virilizer homolog MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 622.775 2 622.271368 1242.52818 79153.61 0.94668 0.00058909 -0.099017 -6.1615E-05 0.84767 0.00052748 622.271302258942 627.27535790096 73.383 1.0015 73.383 72.738 73.74 0 207 90 4 0 0 0 0.012906 3 46511 47.712 23.75 4 1.1574 0.92477 0 8822200 3923700 4898400 5174 856 2665 2956 8425;8426;8427 8427 1463;1464 SFLVIVDGSPK 11 1 0 Phospho (STY) _SFLVIVDGS(ph)PK_ SFLVIVDGS(1)PK S(-101.04)FLVIVDGS(101.04)PK 0 0 1 0 B4DI14;Q9H116 B4DI14 B4DI14 GZF1 GDNF-inducible zinc finger protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 621.3131 2 621.312504 1240.61046 79208.48 0.83082 0.0005162 -0.048871 -3.0364E-05 0.78195 0.00048583 621.312475934963 625.319419739937 118.73 0.72353 118.73 118.34 119.06 7.6294E-06 183 65 5 0 0 0 1.7278E-08 3 71182 105.65 85.866 2 0.77702 0.94129 0 17387000 9280700 8105900 5175 624 2666 2957 8428;8429;8430 8428 1030 SFLVIVDGSPK 11 1 0 Phospho (STY) _SFLVIVDGS(ph)PK_ SFLVIVDGS(1)PK S(-74.89)FLVIVDGS(74.89)PK 0 0 1 0 B4DI14;Q9H116 B4DI14 B4DI14 GZF1 GDNF-inducible zinc finger protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 625.3203 2 621.312504 1240.61046 78109 0.94825 0.00058916 0.11374 7.0667E-05 1.062 0.00065982 621.31243587603 625.319649764833 125.85 0.94469 125.85 125.4 126.34 7.6294E-06 314 85 4 0 0 0 0.0018121 1 81101 75.294 55.507 2 0.99309 0.76268 0 7569200 3651000 3918100 5176 624 2666 2957 8431 8431 1030 SFNEAPVEIPSPSETPAK 18 1 0 Phospho (STY) _SFNEAPVEIPS(ph)PSETPAK_ SFNEAPVEIPS(0.727)PS(0.136)ET(0.136)PAK S(-35.98)FNEAPVEIPS(7.26)PS(-7.26)ET(-7.26)PAK 0 0 1 0 Q9NR48 Q9NR48 Q9NR48 ASH1L Histone-lysine N-methyltransferase ASH1L MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 990.9545 2 990.453528 1978.8925 64073.06 0.75541 0.0007482 0.64379 0.00063765 1.3992 0.0013858 990.453962378897 994.462224631476 105.56 0.38153 105.56 105.41 105.79 0 67 24 4 0 0 0 0.00057888 1 61233 40.962 32.657 4 0.64736 0.76787 0 9317300 5124200 4193100 5177 1215 2667 2958 8432 8432 2444 SFQQSSLSRDSQGHGR 16 0 2 Phospho (STY) _SFQQSSLSRDS(ph)QGHGR_ SFQQS(0.001)S(0.011)LS(0.208)RDS(0.78)QGHGR S(-80.94)FQQS(-29.21)S(-18.52)LS(-5.73)RDS(5.73)QGHGR 0 0 1 1 D6RB45;A0A1B0GX04;D6R9F3;D6RBS2;D6RCM3;D6REK4;D6R8Z5;Q68E03;D6R991;D6REM6;Q68D11;A0A0R4J2E8;A8MXP9;P43243 D6RB45 D6RB45 MATR3;DKFZp686L22104;DKFZp686K23100 Matrin-3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 626.2792 3 619.606027 1855.79625 77473.59 0.68145 0.00042223 -1.1505 -0.00071284 -0.46903 -0.00029061 619.940513568224 626.278139119957 19.601 0.34193 19.601 19.444 19.786 0 91 15 10 0 0 0 2.0542E-09 1 6542 82.765 62.029 5 1.3752 1.176 0 14357000 6349000 8008100 5178 343 2668 2959 8433 8433 537 SFQSDDSSLR 10 0 1 Phospho (STY) _SFQS(ph)DDSSLR_ S(0.001)FQS(0.955)DDS(0.018)S(0.026)LR S(-30.31)FQS(15.72)DDS(-17.19)S(-15.72)LR 0 0 1 0 Q6P0N0;G5E9K5 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 611.243 2 611.242807 1220.47106 79706.98 0.75906 0.00046397 0.15916 9.7285E-05 0.91822 0.00056126 611.242749164354 616.247167236353 46.631 0.7592 46.631 46.281 47.04 0 267 70 6 0 0 0 0.018303 1 27786 43.897 20.524 4 1.1681 0.9302 0 9257300 4959900 4297400 5179 1120 2669 2960 8434 8434 2131 SFSADNFIGIQR 12 0 1 Phospho (STY) _SFS(ph)ADNFIGIQR_ S(0.003)FS(0.997)ADNFIGIQR S(-24.73)FS(24.73)ADNFIGIQR 0 0 1 0 Q8N7R7 Q8N7R7 Q8N7R7 CCNYL1 Cyclin-Y-like protein 1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 722.8292 2 717.824299 1433.63404 NaN NaN NaN 0.20969 0.00015052 NaN NaN NaN NaN 113.59 0.52473 113.59 113.41 113.94 0 0 0 0 3.5035E-06 1 67492 92.19 74.959 2 NaN NaN 0 6886200 0 6886200 5180 1153 2670 2961 8435 8435 2225 SFSADNFIGIQR 12 0 1 Phospho (STY) _SFS(ph)ADNFIGIQR_ S(0.061)FS(0.939)ADNFIGIQR S(-11.86)FS(11.86)ADNFIGIQR 0 0 1 0 Q8N7R7 Q8N7R7 Q8N7R7 CCNYL1 Cyclin-Y-like protein 1 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 722.8271 2 717.824299 1433.63404 NaN NaN NaN NaN NaN NaN NaN NaN NaN 120.56 1 120.56 120.06 121.06 7.6294E-06 0 0 0 0.017708 1 77872 40.066 29.543 2 5181 1153 2670 2961 8436 8436 2225 SFSASQSTDREGASPVTEVR 20 0 2 Phospho (STY) _SFSASQS(ph)TDREGASPVTEVR_ SFSAS(0.024)QS(0.344)T(0.344)DREGAS(0.264)PVT(0.024)EVR S(-49.28)FS(-28.65)AS(-11.58)QS(0)T(0)DREGAS(-1.15)PVT(-11.58)EVR 0 0 1 1 B4DTN6;Q9ULJ3;Q5H9S0 B4DTN6 B4DTN6 ZBTB21;DKFZp781N1974 Zinc finger and BTB domain-containing protein 21 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 737.667 3 730.993616 2189.95902 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.553 1 69.553 69.053 70.053 0 0 0 0 8.646E-05 1 34637 58.952 39.366 7 5182 661 2671 2962 8437 8437 1103;2793 SFSISPVR 8 0 1 Phospho (STY) _SFSIS(ph)PVR_ SFSIS(1)PVR S(-66.4)FS(-41.79)IS(41.79)PVR 0 0 1 0 H7C1M2;H7C2G8;P18583 H7C1M2;P18583 P18583 SON Protein SON MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 486.731 2 486.73115 971.447747 89409.63 0.25982 0.00012646 0.17493 8.5145E-05 0.43475 0.00021161 486.731121529817 491.735367949191 87.171 1.2326 87.171 86.541 87.774 0 250 115 4 0 0 0 0.0064409 2 47191 81.338 61.86 3 1.198 1.4728 0 28443000 10767000 17676000 5183 882;971 2672 2963 8438;8439 8438 1491;1492 SFSISPVR 8 0 1 Phospho (STY) _SFSIS(ph)PVR_ SFS(0.001)IS(0.999)PVR S(-53.04)FS(-31)IS(31)PVR 0 0 1 0 H7C1M2;H7C2G8;P18583 H7C1M2;P18583 P18583 SON Protein SON MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 486.7313 2 486.73115 971.447747 87474.09 0.67967 0.00033082 0.067005 3.2613E-05 0.74668 0.00036343 486.731106692996 491.735288826782 87.903 1.1681 87.903 87.272 88.44 0 400 110 5 0 0 0 0.006801 2 56466 70.552 46.365 3 0.60769 0.45912 0 19808000 10895000 8913100 5184 882;971 2672 2963 8440;8441 8441 1491;1492 SFSISPVR 8 0 1 2 Phospho (STY) _SFS(ph)IS(ph)PVR_ S(0.002)FS(0.998)IS(1)PVR S(-26.53)FS(26.53)IS(42.95)PVR 0 0 2 0 H7C1M2;H7C2G8;P18583 H7C1M2;P18583 P18583 SON Protein SON ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 531.7186 2 526.714315 1051.41408 NaN NaN NaN -0.46459 -0.00024471 NaN NaN NaN NaN 94.974 0.617 94.974 94.519 95.136 7.6294E-06 0 0 0 0.0093977 1 53120 47.559 27.077 3 NaN NaN 0 5697300 0 5697300 5185 882;971 2672 2964 8442 8442 1491;1492 SFSISPVR 8 0 1 2 Phospho (STY) _SFS(ph)IS(ph)PVR_ S(0.002)FS(0.998)IS(1)PVR S(-26.5)FS(26.5)IS(45.7)PVR 0 0 2 0 H7C1M2;H7C2G8;P18583 H7C1M2;P18583 P18583 SON Protein SON MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 526.7143 2 526.714315 1051.41408 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.855 1 94.855 94.355 95.355 0 0 0 0 0.016872 1 53182 50.791 31.548 3 5186 882;971 2672 2964 8443 8443 1491;1492 SFSISPVR 8 0 1 2 Phospho (STY) _SFS(ph)IS(ph)PVR_ S(0.001)FS(0.999)IS(1)PVR S(-30.79)FS(30.79)IS(59.72)PVR 0 0 2 0 H7C1M2;H7C2G8;P18583 H7C1M2;P18583 P18583 SON Protein SON MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 526.7148 2 526.714315 1051.41408 84827.97 0.86003 0.00045299 -0.30778 -0.00016211 0.55225 0.00029088 526.714111587009 531.718104700729 104.28 0.85229 104.28 103.82 104.67 7.6294E-06 207 82 4 0 0 0 0.0049632 2 67020 70.942 46.969 3 0.30633 0.24257 0 10034000 7083000 2950800 5187 882;971 2672 2964 8444;8445 8444 1491;1492 SFSPGSYER 9 0 1 Phospho (STY) _SFS(ph)PGSYER_ S(0.005)FS(0.993)PGS(0.001)Y(0.001)ER S(-23.27)FS(23.27)PGS(-28.58)Y(-31.95)ER 0 0 1 0 H0Y465;P21359 H0Y465 H0Y465 NF1 Neurofibromin;Neurofibromin truncated MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 555.2187 2 555.218604 1108.42265 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.331 1 65.331 64.831 65.831 0 0 0 0 0.020451 1 31417 41.54 27.333 4 5188 848 2673 2965 8446 8446 1457 SFTPDHVVYAR 11 0 1 Phospho (STY) _SFT(ph)PDHVVYAR_ S(0.004)FT(0.996)PDHVVYAR S(-24.36)FT(24.36)PDHVVY(-59.51)AR 0 0 1 0 B3KRY5;B4DPZ5;B4DNU9;Q6NZI2 B3KRY5 B3KRY5 PTRF Polymerase I and transcript release factor MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 686.3082 2 686.308284 1370.60202 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.162 1 84.162 83.662 84.662 0 0 0 0 0.0020942 1 45266 71.555 48.638 3 5189 596 2674 2966 8447 8447 2778 SFVTPPQSHFVR 12 0 1 2 Phospho (STY) _S(ph)FVT(ph)PPQSHFVR_ S(1)FVT(1)PPQSHFVR S(86.35)FVT(49.68)PPQS(-49.68)HFVR 0 0 2 0 H0YLV8;Q3B7X0;H0YNU5;B2RAN0;P54132 H0YLV8 H0YLV8 BLM Bloom syndrome protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 781.3343 2 781.333649 1560.65274 69541.34 1.1089 0.0008664 0.079248 6.1919E-05 1.1881 0.00092832 781.333763213217 786.337927642882 93.746 1.0439 93.746 93.266 94.31 0 421 87 6 0 0 0 2.4019E-09 2 52513 101.32 85.43 3 0.58274 0.73534 0 71572000 46562000 25009000 5190 549 2675 2967 8448;8449 8448 908;2764 SFVTPPQSHFVR 12 0 1 2 Phospho (STY) _S(ph)FVT(ph)PPQSHFVR_ S(1)FVT(0.999)PPQS(0.001)HFVR S(39.12)FVT(28.68)PPQS(-28.68)HFVR 0 0 2 0 H0YLV8;Q3B7X0;H0YNU5;B2RAN0;P54132 H0YLV8 H0YLV8 BLM Bloom syndrome protein MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 786.3367 2 781.333649 1560.65274 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.258 1 93.258 92.758 93.758 -7.6294E-06 0 0 0 0.015497 1 51929 42.095 23.267 3 5191 549 2675 2967 8450 8450 908;2764 SGAAHLCDSQETNCSTAGHSK 21 1 0 Unmodified _SGAAHLCDSQETNCSTAGHSK_ 0 0 0 0 A0A075B784;A0A024R8V6;Q9P275;B3KMW2 A0A075B784 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 742.9861 3 739.979774 2216.91749 72340.35 0.8309 0.00061485 -0.32131 -0.00023776 0.50959 0.00037709 739.979251052039 742.985174341323 65.091 0.21971 65.091 64.969 65.189 0 75 15 7 0 0 0 3.281E-36 1 31197 112.44 103.81 1 1.761 2.2247 0 31086000 9952500 21134000 5192 157 2676 2968 8451 8451 SGAAHLCDSQETNCSTAGHSK 21 1 0 Unmodified _SGAAHLCDSQETNCSTAGHSK_ 0 0 0 0 A0A075B784;A0A024R8V6;Q9P275;B3KMW2 A0A075B784 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 739.9804 3 739.979774 2216.91749 69630.81 0.76862 0.00056876 -0.1947 -0.00014407 0.57392 0.00042469 739.979964798849 742.985488935967 15.743 0.36349 15.743 15.516 15.88 0 157 22 10 0 0 0 2.3827E-05 1 3230 41.256 38.607 1 1.9522 1.5102 0 15801000 4767300 11034000 5193 157 2676 2968 8452 8452 SGAAHLCDSQETNCSTAGHSK 21 1 0 Phospho (STY) _SGAAHLCDS(ph)QETNCSTAGHSK_ SGAAHLCDS(0.998)QET(0.002)NCSTAGHSK S(-69.63)GAAHLCDS(28.02)QET(-28.02)NCS(-76.36)T(-82.29)AGHS(-103.22)K 0 0 1 0 A0A075B784;A0A024R8V6;Q9P275;B3KMW2 A0A075B784 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 769.6426 3 766.635217 2296.88382 68043.64 1.0604 0.00081293 -0.64868 -0.0004973 0.4117 0.00031562 766.969367569132 769.640175059194 17.517 0.34985 17.517 17.351 17.701 0 80 13 10 0 0 0 2.3442E-55 2 4721 132.35 115.79 6 0.78237 0.51003 0 42798000 23560000 19238000 5194 157 2676 2969 8453;8454 8454 248;249 SGAAHLCDSQETNCSTAGHSKTPPSGADSK 30 2 0 Phospho (STY) _SGAAHLCDSQETNCSTAGHS(ph)KTPPSGADSK_ SGAAHLCDSQETNCS(0.037)T(0.086)AGHS(0.414)KT(0.414)PPS(0.048)GADS(0.001)K S(-98.16)GAAHLCDS(-85.66)QET(-41.27)NCS(-10.45)T(-6.84)AGHS(0)KT(0)PPS(-9.38)GADS(-24.81)K 0 0 1 1 A0A075B784;A0A024R8V6;Q9P275;B3KMW2 A0A075B784 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 785.8293 4 785.327669 3137.28157 67558.8 0.88586 0.00069569 -0.68071 -0.00053458 0.20515 0.00016111 785.578154488857 789.585343705992 18.448 0.54182 18.448 18.156 18.697 0 227 24 13 0 0 0 7.485E-49 2 5466 105.17 98.737 9 1.1375 0.85629 0 62476000 30341000 32135000 5195 157 2677 2970 8455;8456 8455 248;249;2649 SGAELALDYLCR 12 0 1 Phospho (STY) _S(ph)GAELALDYLCR_ S(1)GAELALDYLCR S(43.51)GAELALDY(-43.51)LCR 0 0 1 0 A0A024R836;C9JQV0;Q9BRJ6;H7C0T1;H7C2R9 A0A024R836 A0A024R836 MGC11257;C7orf50 Uncharacterized protein C7orf50 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 724.3176 2 724.317992 1446.62143 NaN NaN NaN NaN NaN NaN NaN NaN NaN 125.57 1 125.57 125.07 126.07 -7.6294E-06 0 0 0 0.0084766 1 81159 43.512 16.998 2 5196 146 2678 2971 8457 8457 220 SGAQASSTPLSPTR 14 0 1 Phospho (STY) _SGAQASST(ph)PLSPTR_ SGAQASS(0.007)T(0.528)PLS(0.355)PT(0.11)R S(-100.08)GAQAS(-36.94)S(-18.77)T(1.72)PLS(-1.72)PT(-6.8)R 0 0 1 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;W5X314 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 720.3317 2 720.329945 1438.64534 70822.29 0.98901 0.00071241 0.79054 0.00056945 1.7795 0.0012819 720.330491325593 725.334848493953 39.193 1.1706 39.193 38.533 39.704 0 668 101 10 0 0 0 2.6257E-22 2 22658 123.68 102.64 6 0.7606 0.50241 0 238090000 131990000 106110000 5197 954 2679 2972 8458;8459 8459 2866 SGASAAPAASAAAALAPSATR 21 0 1 Phospho (STY) _S(ph)GASAAPAASAAAALAPSATR_ S(0.853)GAS(0.147)AAPAASAAAALAPSATR S(7.64)GAS(-7.64)AAPAAS(-67.16)AAAALAPS(-104.17)AT(-104.17)R 0 0 1 0 A0A0M3HER2 A0A0M3HER2 A0A0M3HER2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 930.9495 2 925.443829 1848.87311 66068.82 0.78413 0.00072567 -0.014987 -1.387E-05 0.76914 0.0007118 925.945306217091 930.447799521529 94.73 0.52777 94.73 94.53 95.058 0 163 37 6 0 0 0 2.3361E-29 2 52973 106.67 94.384 5 1.1718 1.4404 0 28941000 15426000 13515000 5198 342 2680 2973 8460;8461 8460 536 SGASGASAAPAASAAAALAPSATR 24 0 1 Phospho (STY) _S(ph)GASGASAAPAASAAAALAPSATR_ S(0.489)GAS(0.489)GAS(0.022)AAPAASAAAALAPSATR S(0)GAS(0)GAS(-13.54)AAPAAS(-46.73)AAAALAPS(-62.28)AT(-62.28)R 0 0 1 0 Q7Z7K6 Q7Z7K6 Q7Z7K6 CENPV Centromere protein V ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1033.4893 2 1032.98913 2063.96371 NaN NaN NaN -0.32693 -0.00033771 NaN NaN NaN NaN 95.902 0.60268 95.902 95.584 96.187 7.6294E-06 0 0 0 5.9031E-11 1 53889 62.362 46.607 6 NaN NaN 0 9303100 9303100 0 5199 1139 2681 2974 8462 8462 2184;2185 SGDHLHNDSQIEADFR 16 0 1 Acetyl (Protein N-term),Phospho (STY) _(ac)SGDHLHNDS(ph)QIEADFR_ S(0.002)GDHLHNDS(0.998)QIEADFR S(-26.38)GDHLHNDS(26.38)QIEADFR 1 0 1 0 B9EG90;P11387;Q6PK95;Q6NWZ5 B9EG90 B9EG90 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 658.6077 3 654.937442 1961.7905 74273.66 0.64734 0.00042397 -0.061822 -4.049E-05 0.58552 0.00038348 654.93746256834 658.273496099582 84.905 3.0449 84.905 83.239 86.284 0 2036 286 10 0 0 0 1.403E-16 7 45806 103.41 103.41 2 0.93514 1.1844 0 580380000 312570000 267820000 5200 729 2682 2975 8463;8464;8465;8466;8467;8468;8469 8467 1203;1204 SGDHLHNDSQIEADFR 16 0 1 Acetyl (Protein N-term),Phospho (STY) _(ac)S(ph)GDHLHNDSQIEADFR_ S(0.999)GDHLHNDS(0.001)QIEADFR S(29.9)GDHLHNDS(-29.9)QIEADFR 1 0 1 0 B9EG90;P11387;Q6PK95;Q6NWZ5 B9EG90 B9EG90 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 981.9026 2 981.902525 1961.7905 61742.95 0.26416 0.00025938 0.14512 0.00014249 0.40928 0.00040187 982.404072258477 986.906940120615 84.78 2.808 84.78 83.254 86.062 0 1710 263 9 0 0 0 0 6 45753 285.32 235.84 2 0.92718 1.1733 0 351990000 188420000 163580000 5201 729 2682 2975 8470;8471;8472;8473;8474;8475 8473 1203;1204 SGDHLHNDSQIEADFR 16 0 1 Acetyl (Protein N-term),Phospho (STY) _(ac)S(ph)GDHLHNDSQIEADFR_ S(1)GDHLHNDSQIEADFR S(38.78)GDHLHNDS(-38.78)QIEADFR 1 0 1 0 B9EG90;P11387;Q6PK95;Q6NWZ5 B9EG90 B9EG90 TOP1 DNA topoisomerase 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 981.9041 2 981.902525 1961.7905 NaN NaN NaN 0.087457 8.5875E-05 NaN NaN NaN NaN 83.349 0.10126 83.349 83.27 83.371 0 0 0 0 0.00070096 1 44714 44.807 31.144 2 NaN NaN 0 8319500 8319500 0 5202 729 2682 2975 8476 8476 1203;1204 SGDHLHNDSQIEADFR 16 0 1 Acetyl (Protein N-term),Phospho (STY) _(ac)S(ph)GDHLHNDSQIEADFR_ S(0.994)GDHLHNDS(0.006)QIEADFR S(22.25)GDHLHNDS(-22.25)QIEADFR 1 0 1 0 B9EG90;P11387;Q6PK95;Q6NWZ5 B9EG90 B9EG90 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 655.2723 3 654.937442 1961.7905 74078.14 1.3751 0.00090062 -0.39974 -0.0002618 0.97538 0.00063881 655.271579141065 658.273222854753 78.835 1.6453 78.835 78.047 79.693 0 1455 154 11 0 0 0 1.6204E-05 4 50458 65.784 52.463 2 0.62423 0.40534 0 557120000 343740000 213380000 5203 729 2682 2975 8477;8478;8479;8480 8479 1203;1204 SGDHLHNDSQIEADFR 16 0 1 Acetyl (Protein N-term),Phospho (STY) _(ac)S(ph)GDHLHNDSQIEADFR_ S(1)GDHLHNDSQIEADFR S(82.13)GDHLHNDS(-82.13)QIEADFR 1 0 1 0 B9EG90;P11387;Q6PK95;Q6NWZ5 B9EG90 B9EG90 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 986.9073 2 981.902525 1961.7905 61681.61 0.73987 0.00072648 0.1463 0.00014365 0.88617 0.00087014 981.90287324944 986.906881886054 78.821 1.6559 78.821 78.057 79.712 0 1445 155 11 0 0 0 1.4737E-29 4 50513 120.24 102.54 2 0.62465 0.40557 0 560320000 344610000 215710000 5204 729 2682 2975 8481;8482;8483;8484 8484 1203;1204 SGDHLHNDSQIEADFR 16 0 1 Acetyl (Protein N-term),Phospho (STY) _(ac)SGDHLHNDS(ph)QIEADFR_ S(0.256)GDHLHNDS(0.744)QIEADFR S(-4.64)GDHLHNDS(4.64)QIEADFR 1 0 1 0 B9EG90;P11387;Q6PK95;Q6NWZ5 B9EG90 B9EG90 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 981.9032 2 981.902525 1961.7905 61363.44 0.6729 0.00066072 -0.051644 -5.0709E-05 0.62126 0.00061001 981.902601727944 986.906750480304 79.909 1.5892 79.909 79.609 81.198 7.6294E-06 952 151 10 0 0 0 5.6213E-51 3 51005 151.31 118.78 2 1.1828 0.78501 0 187750000 83444000 104310000 5205 729 2682 2975 8485;8486;8487 8485 1203;1204 SGDHLHNDSQIEADFR 16 0 1 Acetyl (Protein N-term),2 Phospho (STY) _(ac)S(ph)GDHLHNDS(ph)QIEADFR_ S(1)GDHLHNDS(1)QIEADFR S(128.14)GDHLHNDS(128.14)QIEADFR 1 0 2 0 B9EG90;P11387;Q6PK95;Q6NWZ5 B9EG90 B9EG90 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1021.8859 2 1021.88569 2041.75683 59783.13 0.35609 0.00036388 0.046466 4.7483E-05 0.40255 0.00041136 1022.38743994593 1026.89013412551 86.688 1.3421 86.688 86.113 87.455 0 710 126 8 0 0 0 5.3298E-31 4 46724 128.14 92.481 1 0.66314 0.8381 0 172780000 100750000 72023000 5206 729 2682 2976 8488;8489;8490;8491 8489 1203;1204 SGDHLHNDSQIEADFR 16 0 1 Acetyl (Protein N-term),2 Phospho (STY) _(ac)S(ph)GDHLHNDS(ph)QIEADFR_ S(1)GDHLHNDS(1)QIEADFR S(72.42)GDHLHNDS(72.42)QIEADFR 1 0 2 0 B9EG90;P11387;Q6PK95;Q6NWZ5 B9EG90 B9EG90 TOP1 DNA topoisomerase 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1021.887 2 1021.88569 2041.75683 60244.88 0.45173 0.00046162 0.73361 0.00074967 1.1853 0.0012113 1021.88656488074 1026.89046773033 91.457 1.2027 91.457 90.945 92.147 0 836 116 10 0 0 0 2.7608E-06 1 59188 72.421 55.14 1 0.40961 0.27204 0 181540000 129730000 51814000 5207 729 2682 2976 8492 8492 1203;1204 SGDHLHNDSQIEADFR 16 0 1 Acetyl (Protein N-term) _(ac)SGDHLHNDSQIEADFR_ 1 0 0 0 B9EG90;P11387;Q6PK95;Q6NWZ5 B9EG90 B9EG90 TOP1 DNA topoisomerase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 631.6193 3 628.281999 1881.82417 77275.21 1.1758 0.00073876 -0.011141 -6.9998E-06 1.1647 0.00073176 628.616296310067 631.618034914667 93.295 1.5169 93.295 92.579 94.095 0 681 126 7 0 0 0 8.4907E-63 4 52048 166.52 153.73 1 1.1501 1.4525 0 110590000 53959000 56630000 5208 729 2682 2977 8493;8494;8495;8496 8496 SGEDEQQEQTIAEDLVVTK 19 1 0 Acetyl (Protein N-term),Phospho (STY) _(ac)S(ph)GEDEQQEQTIAEDLVVTK_ S(1)GEDEQQEQTIAEDLVVTK S(43.48)GEDEQQEQT(-43.48)IAEDLVVT(-65.62)K 1 0 1 0 F8VR77;A8K6Y1;Q6PIN5;A0A024RB85;Q9UQ80 F8VR77 F8VR77 PA2G4 Proliferation-associated protein 2G4 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1121.4946 2 1120.99394 2239.97333 NaN NaN NaN 0.065638 7.358E-05 NaN NaN NaN NaN 121.4 0.49632 121.4 121.07 121.57 0 0 0 0 6.5513E-11 1 73384 68.41 54.153 3 NaN NaN 0 11715000 11715000 0 5209 192 2683 2978 8497 8497 304 SGEGEVSGLMR 11 0 1 Oxidation (M),Phospho (STY) _S(ph)GEGEVSGLM(ox)R_ SGEGEVSGLM(1)R S(1)GEGEVSGLMR SGEGEVSGLM(57.16)R S(50.57)GEGEVS(-50.57)GLMR 0 1 1 0 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 614.2517 2 609.247035 1216.47952 79862.15 0.49426 0.00030113 0.37543 0.00022873 0.8697 0.00052986 609.247111430718 614.251815694857 49.77 1.0397 49.77 49.219 50.258 -3.8147E-06 327 88 6 0 0 0 0.0075904 1 20052 57.164 49.597 2 1.1741 1.3254 0 10650000 4918100 5731900 5210 542 2684 2979 8498 8498 141 903 SGEGEVSGLMR 11 0 1 Oxidation (M),Phospho (STY) _S(ph)GEGEVSGLM(ox)R_ SGEGEVSGLM(1)R S(1)GEGEVSGLMR SGEGEVSGLM(60.16)R S(56.01)GEGEVS(-56.01)GLMR 0 1 1 0 B2R8R5;Q13263;M0R0K9 B2R8R5 B2R8R5 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 614.2517 2 609.247035 1216.47952 78398.96 0.96137 0.00058571 0.031922 1.9449E-05 0.99329 0.00060516 609.247173088178 614.251189924095 41.287 0.68869 41.287 40.941 41.63 0 258 58 6 0 0 0 0.0069831 1 24039 60.161 57.158 2 0.80153 0.62274 0 15819000 8635500 7183400 5211 542 2684 2979 8499 8499 141 903 SGELTALEFSASPGLR 16 0 1 Phospho (STY) _SGELTALEFSAS(ph)PGLR_ SGELTALEFS(0.052)AS(0.948)PGLR S(-94.6)GELT(-78.66)ALEFS(-12.62)AS(12.62)PGLR 0 0 1 0 Q32Q31;B3KQX6;A0A090N7S2;H0Y895;Q68E09;B9EGR7;Q12774 Q32Q31 Q32Q31 LOC728377;ARHGEF5;DKFZp686N1969 Rho guanine nucleotide exchange factor 5 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 862.9091 2 857.906017 1713.79748 NaN NaN NaN -0.090269 -7.7442E-05 NaN NaN NaN NaN 119.44 0.32369 119.44 119.32 119.65 -7.6294E-06 0 0 0 1.4999E-21 2 71772 105.39 75.648 4 NaN NaN 0 5972700 0 5972700 5212 277 2685 2980 8500;8501 8500 439 SGFGEISSPVIR 12 0 1 Phospho (STY) _SGFGEISS(ph)PVIR_ SGFGEIS(0.164)S(0.836)PVIR S(-116.98)GFGEIS(-7.08)S(7.08)PVIR 0 0 1 0 G3V1T4;P57740 G3V1T4 G3V1T4 NUP107 Nuclear pore complex protein Nup107 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 669.8211 2 664.815942 1327.61733 74161.03 1.0968 0.00072919 0.26198 0.00017417 1.3588 0.00090336 664.815982092298 669.82035720811 104.98 1.1685 104.98 104.47 105.64 7.6294E-06 320 79 6 0 0 0 1.2032E-25 3 60715 145.31 129.43 3 1.0601 1.3094 0 33193000 15828000 17365000 5213 838 2686 2981 8502;8503;8504 8503 1443 SGFGEISSPVIR 12 0 1 Phospho (STY) _SGFGEISS(ph)PVIR_ SGFGEIS(0.194)S(0.806)PVIR S(-56.1)GFGEIS(-6.18)S(6.18)PVIR 0 0 1 0 G3V1T4;P57740 G3V1T4 G3V1T4 NUP107 Nuclear pore complex protein Nup107 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 669.821 2 664.815942 1327.61733 74602 1.2207 0.00081155 -0.083576 -5.5563E-05 1.1371 0.00075599 664.815769632564 669.820002786936 109.9 1.2135 109.9 109.33 110.55 7.6294E-06 574 115 6 0 0 0 0.0055508 5 70460 65.295 57.075 3 1.4331 1.004 0 35056000 14270000 20786000 5214 838 2686 2981 8505;8506;8507;8508;8509 8506 1443 SGGFQSMGLSYPVFK 15 1 0 Oxidation (M),Phospho (STY) _S(ph)GGFQSM(ox)GLSYPVFK_ SGGFQSM(1)GLSYPVFK S(0.979)GGFQS(0.02)MGLS(0.001)Y(0.001)PVFK SGGFQSM(46.32)GLSYPVFK S(16.98)GGFQS(-16.98)MGLS(-32.41)Y(-32.41)PVFK 0 1 1 0 Q8TDD1;F8VRX4 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 854.8816 2 850.873131 1699.73171 NaN NaN NaN NaN NaN NaN NaN NaN NaN 115.17 1 115.17 114.67 115.67 0 0 0 0 0.0012558 1 68679 46.319 34.879 4 5215 1162 2687 2982 8510 8510 323 2246 SGGNEVSIEER 11 0 1 Phospho (STY) _S(ph)GGNEVSIEER_ S(1)GGNEVSIEER S(88.35)GGNEVS(-88.35)IEER 0 0 1 0 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 628.762 2 628.761364 1255.50818 75892.69 0.6349 0.0003992 -0.6716 -0.00042227 -0.036697 -2.3074E-05 628.7614475757 633.765565723345 49.785 1.2308 49.785 49.207 50.438 -3.8147E-06 515 105 8 0 0 0 5.8815E-09 4 20128 114.7 99.165 2 0.42955 0.52219 0 20532000 13897000 6635200 5216 1069 2688 2983 8511;8512;8513;8514 8514 2012 SGGNEVSIEER 11 0 1 Phospho (STY) _S(ph)GGNEVSIEER_ S(1)GGNEVSIEER S(53.69)GGNEVS(-53.69)IEER 0 0 1 0 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 628.7621 2 628.761364 1255.50818 78474.36 1.1331 0.00071246 -0.2204 -0.00013858 0.91273 0.00057389 628.761357321254 633.765103985563 40.835 0.60192 40.835 40.599 41.201 0 200 53 7 0 0 0 0.002811 1 23701 71.558 51.771 2 0.61181 0.4715 0 16886000 11688000 5197800 5217 1069 2688 2983 8515 8515 2012 SGGSGHAVAEPASPEQELDQNK 22 1 0 Phospho (STY) _SGGSGHAVAEPAS(ph)PEQELDQNK_ SGGSGHAVAEPAS(1)PEQELDQNK S(-71.07)GGS(-71.53)GHAVAEPAS(71.07)PEQELDQNK 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 766.3383 3 763.332409 2286.9754 69018.15 0.62827 0.00047958 -0.25603 -0.00019544 0.37224 0.00028414 763.666335237442 766.003761301138 69.497 2.6899 69.497 67.928 70.618 0 2058 257 12 0 0 0 1.9279E-45 6 34759 126.59 119.48 3 1.7826 2.1987 0 1083600000 367930000 715670000 5218 994 2689 2984 8516;8517;8518;8519;8520;8521 8521 1793 SGGSGHAVAEPASPEQELDQNK 22 1 0 Phospho (STY) _SGGSGHAVAEPAS(ph)PEQELDQNK_ SGGSGHAVAEPAS(1)PEQELDQNK S(-79.19)GGS(-79.19)GHAVAEPAS(79.19)PEQELDQNK 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1144.9966 2 1144.49498 2286.9754 57107.43 0.080166 9.1749E-05 -0.097552 -0.00011165 -0.017386 -1.9899E-05 1144.99627453754 1149.00301866729 69.524 2.3533 69.524 68.187 70.54 -7.6294E-06 1625 228 11 0 0 0 8.3554E-45 6 34668 124.3 112.19 3 1.7331 2.1417 0 449290000 167630000 281660000 5219 994 2689 2984 8522;8523;8524;8525;8526;8527 8525 1793 SGGSGHAVAEPASPEQELDQNK 22 1 0 Phospho (STY) _SGGSGHAVAEPAS(ph)PEQELDQNK_ S(0.001)GGS(0.001)GHAVAEPAS(0.998)PEQELDQNK S(-29.19)GGS(-29.19)GHAVAEPAS(29.19)PEQELDQNK 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 763.3323 3 763.332409 2286.9754 NaN NaN NaN NaN NaN NaN NaN NaN NaN 68.033 1 68.033 67.533 68.533 0 0 0 0 0.00032895 1 33624 46.695 38.336 3 5220 994 2689 2984 8528 8528 1793 SGGSGHAVAEPASPEQELDQNK 22 1 0 Phospho (STY) _SGGSGHAVAEPAS(ph)PEQELDQNK_ SGGSGHAVAEPAS(1)PEQELDQNK S(-73.93)GGS(-73.93)GHAVAEPAS(73.93)PEQELDQNK 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1149.0045 2 1144.49498 2286.9754 55966.9 0.73125 0.00083691 -0.65127 -0.00074538 0.079979 9.1535E-05 1144.99608634469 1149.00244212939 57.551 3.1647 57.551 55.738 58.903 0 2034 280 13 0 0 0 5.6625E-30 4 34947 108.97 108.97 3 3.7282 2.483 0 1439000000 330400000 1108600000 5221 994 2689 2984 8529;8530;8531;8532 8529 1793 SGGSGHAVAEPASPEQELDQNK 22 1 0 Phospho (STY) _SGGSGHAVAEPAS(ph)PEQELDQNK_ SGGSGHAVAEPAS(1)PEQELDQNK S(-40.6)GGS(-40.6)GHAVAEPAS(40.6)PEQELDQNK 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 763.6685 3 763.332409 2286.9754 68380.94 1.245 0.00095035 -0.99171 -0.000757 0.25329 0.00019335 763.666896373877 766.004017374081 57.595 4.1287 57.595 55.706 59.835 0 2979 372 15 0 0 0 9.4618E-13 3 35709 65.775 65.775 3 3.621 2.4104 0 1933400000 416490000 1516900000 5222 994 2689 2984 8533;8534;8535 8534 1793 SGGSGHAVAEPASPEQELDQNK 22 1 0 Phospho (STY) _SGGSGHAVAEPAS(ph)PEQELDQNK_ SGGSGHAVAEPAS(1)PEQELDQNK S(-37.57)GGS(-37.57)GHAVAEPAS(37.57)PEQELDQNK 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 766.0036 3 763.332409 2286.9754 NaN NaN NaN -0.42894 -0.00032742 NaN NaN NaN NaN 50.007 1.1004 50.007 49.246 50.347 -3.8147E-06 0 0 0 2.0595E-06 1 30237 49.141 41.926 3 NaN NaN 0 20463000 0 20463000 5223 994 2689 2984 8536 8536 1793 SGGVNQYVVQEVLSIK 16 1 0 Phospho (STY) _S(ph)GGVNQYVVQEVLSIK_ S(1)GGVNQYVVQEVLSIK S(63.42)GGVNQY(-63.42)VVQEVLS(-88.42)IK 0 0 1 0 Q15021;B3KMS0;B3KY03;E7EN77;Q6ZV00;F5GZK7;A0PJ76;F5H431 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 900.9536 2 900.450592 1798.88663 66439.84 0.70245 0.00063252 -0.51872 -0.00046708 0.18373 0.00016544 900.450230772447 904.958859021059 131.91 0.43864 131.91 131.69 132.13 0 145 40 6 0 0 0 5.6797E-10 1 80179 90.561 82.695 3 0.49139 0.58273 0 7918300 4968500 2949800 5224 1067 2690 2985 8537 8537 2010 SGLCSPSYVAVTPFSLR 17 0 1 3 Phospho (STY) _S(ph)GLCS(ph)PSYVAVT(ph)PFSLR_ S(0.995)GLCS(0.953)PS(0.029)Y(0.025)VAVT(0.942)PFS(0.057)LR S(27.18)GLCS(16.01)PS(-16.01)Y(-16.59)VAVT(12.28)PFS(-12.28)LR 0 0 3 0 H0YBG3;B3CJD8;B3CJD2;B3CJB9;B3CJB2;B3CJB0;B3CJA9;B3CJA3;B3CJ74;B3CJ73;B3CJ66;B3CJ65;B3CJ63;A0A0B4J1R1;B3CJD3;B3CJD1;B3CJC0;B3CJB8;B3CJB1;B3CJA1;B3CJ82;B3CJ64;B4E1N7;A0A024R9L7;H0YBT0;A0A087WUS5;P01106;B3CJD7;B3CJC8;B3CJC7;B3CJC6;B3CJB3;B3CJA7;B3CJA4;B3CJ93;B3CJ90;B3CJ88;B3CJ86;B3CJ81;B3CJ78;B3CJ76;B3CJ72;B0B0N9;B3CJD6;B3CJ71;B3CJ94;B3CJ89;B3CJ87;B3CJ77;B3CJ75;B3CJ69;B3CJD5 H0YBG3 H0YBG3 MYC Myc proto-oncogene protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1041.4199 2 1040.91623 2079.81791 61003.53 0.5521 0.00057469 1.2692 0.0013211 1.8213 0.0018958 1040.91692527462 1046.42349191617 145.69 0.52104 145.69 145.47 145.99 0 100 23 8 0 0 0 0.00011396 2 84027 58.123 51.553 20 0.74191 0.80873 0 4751500 2453000 2298400 5225 169 2691 2986 8538;8539 8538 265;266;2651 SGLEELVLSEMNSPSR 16 0 1 Oxidation (M),Phospho (STY) _SGLEELVLS(ph)EM(ox)NSPSR_ SGLEELVLSEM(1)NSPSR SGLEELVLS(0.739)EMNS(0.22)PS(0.041)R SGLEELVLSEM(87.18)NSPSR S(-74.39)GLEELVLS(5.26)EMNS(-5.26)PS(-12.57)R 0 1 1 0 A0A087WXA6;A0A087WT45;A0A075B793;A8K7Z3;Q4V328 A0A087WXA6 A0A087WXA6 GRIPAP1 GRIP1-associated protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 922.4126 2 922.410806 1842.80706 64127.14 0.4654 0.00042929 0.82941 0.00076506 1.2948 0.0011944 922.41143593559 927.417196092115 111.69 0.78382 111.69 111.31 112.09 0 270 66 6 0 0 0 2.3339E-09 1 66140 87.184 78.619 4 1.7715 2.1796 0 24090000 9198500 14892000 5226 242 2692 2987 8540 8540 58 381 SGLNGSILAER 11 0 1 Phospho (STY) _SGLNGS(ph)ILAER_ SGLNGS(1)ILAER S(-82.63)GLNGS(82.63)ILAER 0 0 1 0 Q96H22 Q96H22 Q96H22 CENPN Centromere protein N MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 598.7874 2 598.787185 1195.55982 78442.97 0.57117 0.00034201 -0.49999 -0.00029939 0.071183 4.2624E-05 598.787039871009 603.791219572893 85.034 1.4516 85.034 84.29 85.742 7.6294E-06 393 136 5 0 0 0 2.6181E-14 4 45948 136.01 96.165 2 0.68664 0.8642 0 48995000 29233000 19762000 5227 1176 2693 2988 8541;8542;8543;8544 8544 2310 SGLNGSILAER 11 0 1 Phospho (STY) _SGLNGS(ph)ILAER_ SGLNGS(1)ILAER S(-38.98)GLNGS(38.98)ILAER 0 0 1 0 Q96H22 Q96H22 Q96H22 CENPN Centromere protein N MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 598.7881 2 598.787185 1195.55982 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.379 1 84.379 83.879 84.879 7.6294E-06 0 0 0 0.0010081 1 45414 66.989 31.447 2 5228 1176 2693 2988 8545 8545 2310 SGLNGSILAER 11 0 1 Phospho (STY) _SGLNGS(ph)ILAER_ SGLNGS(1)ILAER S(-41)GLNGS(41)ILAER 0 0 1 0 Q96H22 Q96H22 Q96H22 CENPN Centromere protein N MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 603.7916 2 598.787185 1195.55982 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.647 1 85.647 85.147 86.147 0 0 0 0 0.0013629 1 46267 64.121 30.246 2 5229 1176 2693 2988 8546 8546 2310 SGLNGSILAER 11 0 1 Phospho (STY) _SGLNGS(ph)ILAER_ S(0.005)GLNGS(0.995)ILAER S(-23.08)GLNGS(23.08)ILAER 0 0 1 0 Q96H22 Q96H22 Q96H22 CENPN Centromere protein N MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 603.7925 2 598.787185 1195.55982 78246.68 0.97219 0.00058214 0.13971 8.3656E-05 1.1119 0.00066579 598.78718539696 603.791330590302 86.622 0.96375 86.622 86.208 87.171 0 337 89 5 0 0 0 0.0083219 1 55549 58.595 38.388 2 1.098 0.79263 0 27225000 12734000 14491000 5230 1176 2693 2988 8547 8547 2310 SGLNGSILAEREEPLR 16 0 2 Phospho (STY) _SGLNGS(ph)ILAEREEPLR_ SGLNGS(1)ILAEREEPLR S(-44.59)GLNGS(44.59)ILAEREEPLR 0 0 1 1 Q96H22 Q96H22 Q96H22 CENPN Centromere protein N MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 607.9689 3 607.634924 1819.88294 77557.04 0.67256 0.00040867 -0.25785 -0.00015668 0.41471 0.00025199 607.634660855308 614.307019986965 99.171 0.7425 99.171 98.79 99.532 0 297 64 6 0 0 0 4.3268E-05 1 56239 59.512 48.457 2 0.62803 0.77901 0 42327000 24647000 17679000 5231 1176 2694 2989 8548 8548 2310 SGLNGSILAEREEPLR 16 0 2 Phospho (STY) _SGLNGS(ph)ILAEREEPLR_ SGLNGS(1)ILAEREEPLR S(-43.17)GLNGS(43.17)ILAEREEPLR 0 0 1 1 Q96H22 Q96H22 Q96H22 CENPN Centromere protein N MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 607.6354 3 607.634924 1819.88294 78089.41 0.90186 0.000548 0.38625 0.0002347 1.2881 0.0007827 607.635078315753 614.307336631956 97.424 1.1952 97.424 96.784 97.979 7.6294E-06 605 112 7 0 0 0 3.3772E-05 1 62828 64.26 52.236 2 1.1033 0.95476 0 33200000 15454000 17746000 5232 1176 2694 2989 8549 8549 2310 SGPPSPPSTATSFGGPR 17 0 1 Phospho (STY) _SGPPS(ph)PPSTATSFGGPR_ SGPPS(0.997)PPS(0.002)TATSFGGPR S(-39.22)GPPS(27.09)PPS(-27.09)T(-33.57)AT(-37.95)S(-42.8)FGGPR 0 0 1 0 A0A0A0MS59;Q6ZRS2;A0A0C4DFX4;B3KN63;A0A087X0E3;Q6ZTM8 A0A0A0MS59 A0A0A0MS59 SRCAP Helicase SRCAP MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 840.3756 2 840.374884 1678.73521 67743.38 0.75241 0.00063231 0.8176 0.00068709 1.57 0.0013194 840.375153000353 845.380510243078 78.571 0.95752 78.571 78.168 79.126 0 270 84 5 0 0 0 1.3392E-06 1 41097 74.993 59.102 6 0.46988 0.584 0 36314000 21657000 14657000 5233 292 2695 2990 8550 8550 469 SGPPSPPSTATSFGGPR 17 0 1 Phospho (STY) _SGPPS(ph)PPSTATSFGGPR_ SGPPS(0.995)PPS(0.003)T(0.001)ATS(0.001)FGGPR S(-33.09)GPPS(25.38)PPS(-25.38)T(-29.55)AT(-37.33)S(-31.92)FGGPR 0 0 1 0 A0A0A0MS59;Q6ZRS2;A0A0C4DFX4;B3KN63;A0A087X0E3;Q6ZTM8 A0A0A0MS59 A0A0A0MS59 SRCAP Helicase SRCAP MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 840.376 2 840.374884 1678.73521 66530.34 1.0887 0.00091489 0.6311 0.00053036 1.7198 0.0014453 840.375527474515 845.379508355814 81.325 1.2289 81.325 80.552 81.781 0 432 114 8 0 0 0 6.5753E-05 1 51919 55.912 49.809 6 1.0687 0.75728 0 30830000 14962000 15868000 5234 292 2695 2990 8551 8551 469 SGPPSPPSTATSFGGPRPR 19 0 2 Phospho (STY) _SGPPS(ph)PPSTATSFGGPRPR_ SGPPS(0.991)PPS(0.003)T(0.003)AT(0.001)S(0.001)FGGPRPR S(-36.09)GPPS(24.97)PPS(-24.97)T(-24.97)AT(-29.92)S(-29.92)FGGPRPR 0 0 1 1 A0A0A0MS59;Q6ZRS2;A0A0C4DFX4;B3KN63;A0A087X0E3;Q6ZTM8 A0A0A0MS59 A0A0A0MS59 SRCAP Helicase SRCAP MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 645.3041 3 644.970306 1931.88909 75988.74 0.94312 0.00060829 -0.43739 -0.0002821 0.50574 0.00032618 645.304046144692 651.642402241416 77.169 1.2814 77.169 76.598 77.879 7.6294E-06 480 112 5 0 0 0 4.1337E-07 2 40124 55.844 41.406 6 0.65976 0.81867 0 46425000 24800000 21626000 5235 292 2696 2991 8552;8553 8553 469 SGQSALYDALFSSQSPK 17 1 0 Phospho (STY) _SGQSALYDALFSS(ph)QSPK_ SGQSALYDALFS(0.134)S(0.517)QS(0.349)PK S(-86.5)GQS(-83.03)ALY(-63.28)DALFS(-5.87)S(1.7)QS(-1.7)PK 0 0 1 0 D3DX73;P49792;J3KNE0;Q7Z3J3;A6NKT7;B4DZH4 D3DX73 D3DX73 hCG_1994636;RANBP2;RGPD3;RGPD4 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 933.4218 2 933.419488 1864.82442 62567.75 0.77134 0.00071998 0.43777 0.00040863 1.2091 0.0011286 933.419358629431 937.427833926729 119.76 0.77911 119.76 119.43 120.21 0 349 69 7 0 0 0 1.4567E-12 3 72006 99.021 99.021 6 1.8661 2.2984 0 22811000 7591900 15219000 5236 769 2697 2992 8554;8555;8556 8555 1297 SGRPSEVDNDQLR 13 0 2 Phospho (STY) _SGRPS(ph)EVDNDQLR_ S(0.29)GRPS(0.71)EVDNDQLR S(-3.88)GRPS(3.88)EVDNDQLR 0 0 1 1 B4DND2;Q96H41;Q53H47;B9ZVV8 B4DND2 B4DND2 SETMAR Histone-lysine N-methyltransferase SETMAR;Histone-lysine N-methyltransferase;Transposon Hsmar1 transposase MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 776.8423 2 776.841208 1551.66786 69294.96 0.94677 0.00073549 0.91989 0.00071461 1.8667 0.0014501 776.841273937984 786.850490395492 27.665 0.54376 27.665 27.494 28.038 -1.9073E-06 146 34 7 0 0 0 0.0073762 1 13601 41.542 28.981 2 1.4781 1.2798 0 36761000 16564000 20197000 5237 645 2698 2993 8557 8557 1073 SGSETPDGPLSPGK 14 1 0 Phospho (STY) _SGSETPDGPLS(ph)PGK_ SGSET(0.006)PDGPLS(0.993)PGK S(-38.1)GS(-38.44)ET(-21.96)PDGPLS(21.96)PGK 0 0 1 0 B9EGR5;Q8IWI9 B9EGR5 B9EGR5 MGA MAX gene-associated protein ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 708.8104 2 704.803229 1407.5919 NaN NaN NaN -1.0701 -0.00075423 NaN NaN NaN NaN 53.553 0.8112 53.553 53.147 53.959 -3.8147E-06 0 0 0 0.0013642 1 22500 52.527 42.684 4 NaN NaN 0 4520600 0 4520600 5238 732 2699 2994 8558 8558 1226 SGSGQSSGYSQHGSGSSHSSGYR 23 0 1 Unmodified _SGSGQSSGYSQHGSGSSHSSGYR_ 0 0 0 0 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 CON__Q86YZ3 HRNR Hornerin ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 748.6486 3 748.648069 2242.92238 NaN NaN NaN -0.50915 -0.00038117 NaN NaN NaN NaN 62.588 0.2516 62.588 62.496 62.747 0 0 0 0 7.6946E-10 1 29269 51.234 40.365 1 NaN NaN 0 5690000 5690000 0 + 5239 761 2700 2995 8559 8559 SGSMDPSGAHPSVR 14 0 1 Oxidation (M) _SGSM(ox)DPSGAHPSVR_ SGSM(1)DPSGAHPSVR SGSM(44.46)DPSGAHPSVR 0 1 0 0 B4DDX2;B2R7B5;Q07666 B4DDX2 B4DDX2 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 470.8813 3 467.545619 1399.61503 NaN NaN NaN 0.014961 6.9949E-06 NaN NaN NaN NaN 54.253 0.21751 54.253 54.097 54.315 0 0 0 0 0.0022575 1 22900 44.457 38.475 1 NaN NaN 0 3263300 0 3263300 5240 536 2701 2996 8560 8560 140 SGSPGSSSYEHYESR 15 0 1 Phospho (STY) _SGS(ph)PGSSSYEHYESR_ S(0.413)GS(0.516)PGS(0.051)S(0.015)S(0.005)Y(0.001)EHYESR S(-0.97)GS(0.97)PGS(-10.08)S(-15.4)S(-20.27)Y(-28.11)EHY(-38.57)ES(-37.23)R 0 0 1 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;B7ZM66;A0A0J9YYB5;A0A0J9YWD5;A0A024RCA1;Q9P1Y6 A0A0J9YX88 A0A0J9YX88 PHRF1;KIAA1542 PHD and RING finger domain-containing protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 855.3268 2 855.325588 1708.63662 66506 0.91825 0.0007854 1.0903 0.00093254 2.0085 0.0017179 855.326426934042 860.831971565989 27.417 0.29916 27.417 27.265 27.564 0 94 18 8 0 0 0 0.0025922 1 13353 41.695 34.287 8 0.44738 0.33844 0 19605000 13468000 6136800 5241 207 2702 2997 8561 8561 320 SGSSQELDVKPSASPQER 18 1 1 Phospho (STY) _S(ph)GSSQELDVKPSASPQER_ S(0.333)GS(0.333)S(0.333)QELDVKPSASPQER S(0)GS(0)S(0)QELDVKPS(-36.26)AS(-38.07)PQER 0 0 1 1 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 991.9491 2 991.446766 1980.87898 62305.73 0.66364 0.00065796 -0.45809 -0.00045417 0.20555 0.00020379 991.947100662361 1000.45788586016 60.965 1.3931 60.965 60.019 61.412 -3.8147E-06 267 101 6 0 0 0 0.00012642 1 27938 45.79 30.034 5 0.75195 0.86381 0 25060000 12807000 12253000 5242 383 2703 2998 8562 8562 622;623;624 SGSSSPDSEITELK 14 1 0 Phospho (STY) _SGSSS(ph)PDSEITELK_ S(0.02)GS(0.017)S(0.108)S(0.856)PDS(0.001)EITELK S(-16.42)GS(-17.12)S(-9.01)S(9.01)PDS(-32.23)EIT(-45.91)ELK 0 0 1 0 B4E1E0;P17812 B4E1E0 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 762.8318 2 758.824358 1515.63416 72832.4 0.82827 0.00062851 -0.93823 -0.00071195 -0.10996 -8.344E-05 758.824154847416 762.830167194048 78.808 1.0592 78.808 78.26 79.32 0 326 93 5 0 0 0 0.0024034 1 41075 63.709 51.995 6 1.3872 1.7582 0 33711000 13043000 20667000 5243 680 2704 2999 8563 8563 1124 SGTSSPQSPVFR 12 0 1 Phospho (STY) _SGTSSPQS(ph)PVFR_ SGTS(0.002)S(0.024)PQS(0.974)PVFR S(-49.42)GT(-50.06)S(-27.95)S(-16.04)PQS(16.04)PVFR 0 0 1 0 Q6ZRV0;Q8N556 Q6ZRV0 Q6ZRV0 AFAP1 Actin filament-associated protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 670.2991 2 665.295374 1328.5762 75176.38 0.90995 0.00060539 -0.011335 -7.5414E-06 0.89862 0.00059784 665.796482713714 670.299389933744 60.358 0.74888 60.358 59.95 60.699 0 153 52 4 0 0 0 0.00098642 2 27483 78.964 63.374 5 2.4049 2.8732 0 16645000 4154300 12490000 5244 1127 2705 3000 8564;8565 8565 2147;2148;2149 SGTSSPQSPVFR 12 0 1 2 Phospho (STY) _SGTS(ph)SPQS(ph)PVFR_ S(0.036)GT(0.041)S(0.461)S(0.461)PQS(1)PVFR S(-11.07)GT(-10.48)S(0)S(0)PQS(32.07)PVFR 0 0 2 0 Q6ZRV0;Q8N556 Q6ZRV0 Q6ZRV0 AFAP1 Actin filament-associated protein 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 705.2803 2 705.278539 1408.54253 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.311 1 63.311 62.811 63.811 0 0 0 0 0.00085475 1 29784 59.185 42.92 10 5245 1127 2705 3001 8566 8566 2147;2148;2149 SGTSSPQSPVFR 12 0 1 2 Phospho (STY) _SGTSS(ph)PQS(ph)PVFR_ S(0.011)GT(0.011)S(0.153)S(0.828)PQS(0.997)PVFR S(-19.55)GT(-19.2)S(-7.37)S(7.37)PQS(28.68)PVFR 0 0 2 0 Q6ZRV0;Q8N556 Q6ZRV0 Q6ZRV0 AFAP1 Actin filament-associated protein 1 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 710.2839 2 705.278539 1408.54253 NaN NaN NaN 0.31839 0.00022456 NaN NaN NaN NaN 67.435 1.5975 67.435 66.651 68.248 0 0 0 0 0.0073822 1 41973 43.03 28.154 10 NaN NaN 0 40060000 0 40060000 5246 1127 2705 3001 8567 8567 2147;2148;2149 SGVSLAALK 9 1 0 Unmodified _SGVSLAALK_ 0 0 0 0 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 423.2579 2 423.258185 844.501818 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.878 1 89.878 89.378 90.378 0 0 0 0 0.0070401 1 49336 60.118 22.56 1 5247 410;967 2706 3002 8568 8568 SGVSLAALK 9 1 0 Unmodified _SGVSLAALK_ 0 0 0 0 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 427.2655 2 423.258185 844.501818 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.435 1 90.435 89.935 90.935 0 0 0 0 0.0029679 1 49750 74.301 52.17 1 5248 410;967 2706 3002 8569 8569 SGVSLAALK 9 1 0 Unmodified _SGVSLAALK_ 0 0 0 0 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 423.2582 2 423.258185 844.501818 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.636 1 90.636 90.136 91.136 0 0 0 0 0.0065744 1 49902 61.582 29.227 1 5249 410;967 2706 3002 8570 8570 SGVSLAALK 9 1 0 Unmodified _SGVSLAALK_ 0 0 0 0 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402;P16403 Q4VB24;P16403 Q4VB24 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 427.2662 2 423.258185 844.501818 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.094 1 91.094 90.594 91.594 0 0 0 0 0.0074021 1 50248 58.981 39.344 1 5250 410;967 2706 3002 8571 8571 SGYISESENSEISQQVR 17 0 1 Phospho (STY) _SGYIS(ph)ESENSEISQQVR_ S(0.016)GY(0.013)IS(0.852)ES(0.118)ENS(0.001)EISQQVR S(-17.19)GY(-18.02)IS(8.58)ES(-8.58)ENS(-31.33)EIS(-50.46)QQVR 0 0 1 0 H0UIC2;A0A075B754;Q96QE3 H0UIC2 H0UIC2 ATAD5 ATPase family AAA domain-containing protein 5 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1001.9337 2 996.930949 1991.84734 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.85 1 80.85 80.35 81.35 0 0 0 0 4.1099E-08 1 42900 74.141 58.251 6 5251 241 2707 3003 8572 8572 379 SHDDGNIDLESDSFLK 16 1 0 Phospho (STY) _SHDDGNIDLESDS(ph)FLK_ SHDDGNIDLES(0.046)DS(0.954)FLK S(-83.42)HDDGNIDLES(-13.13)DS(13.13)FLK 0 0 1 0 P18583;D3DSF7 P18583 P18583 SON Protein SON MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 936.3869 2 936.388385 1870.76222 63937.01 0.66362 0.00062141 -0.10592 -9.9185E-05 0.5577 0.00052222 936.889617512161 940.395053128837 111.65 0.84658 111.65 111.32 112.16 7.6294E-06 347 72 7 0 0 0 3.665E-09 1 65938 85.563 74.35 3 0.84896 1.0705 0 49002000 28018000 20984000 5252 971 2708 3004 8573 8573 1723 SHEGETAYIR 10 0 1 Unmodified _SHEGETAYIR_ 0 0 0 0 J3KTL2;Q07955;A8K1L8;J3KSR8;B7Z570 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 586.7826 2 581.778002 1161.54145 79412.68 0.74616 0.0004341 -0.01248 -7.2607E-06 0.73367 0.00042684 581.777945867092 586.782070232222 79.632 1.3862 79.632 78.811 80.197 0 619 123 7 0 0 0 3.7816E-21 4 41565 149.72 117.96 1 1.2762 1.6132 0 195080000 87049000 108030000 5253 895 2709 3005 8574;8575;8576;8577 8574 SHEGETAYIR 10 0 1 Unmodified _SHEGETAYIR_ 0 0 0 0 J3KTL2;Q07955;A8K1L8;J3KSR8;B7Z570 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 388.1873 3 388.18776 1161.54145 95860.84 -0.13388 -5.1971E-05 0.50745 0.00019698 0.37357 0.00014501 388.188047202474 391.523887981695 79.572 0.74857 79.572 79.19 79.938 0 117 69 3 0 0 0 0.0029253 2 41956 51.436 45.401 1 1.0759 1.3231 0 26669000 11961000 14708000 5254 895 2709 3005 8578;8579 8579 SHEGETSYIR 10 0 1 Unmodified _SHEGETSYIR_ 0 0 0 0 A8K3M9;Q13242 A8K3M9 A8K3M9 SRSF9 Serine/arginine-rich splicing factor 9 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 594.7795 2 589.775459 1177.53637 79168.35 0.66278 0.00039089 -0.14721 -8.6824E-05 0.51557 0.00030407 589.775233523331 594.779559830254 77.578 0.67559 77.578 77.192 77.867 0 204 60 5 0 0 0 0.0053614 1 40305 76.221 45.148 1 1.9507 2.4571 0 54762000 18655000 36107000 5255 454 2710 3006 8580 8580 SHGIDLDHNR 10 0 1 Unmodified _SHGIDLDHNR_ 0 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JVD8;C9J578;C9J9E4 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 391.8597 3 388.523254 1162.54793 94614.43 0.25456 9.8903E-05 0.41007 0.00015932 0.66463 0.00025822 388.523382813542 391.85954082459 95.982 3.179 95.982 94.417 97.596 0 1349 267 8 0 0 0 6.8059E-11 10 53537 123.11 107.51 1 0.84023 1.0646 0 710970000 379300000 331670000 5256 1220 2711 3007 8581;8582;8583;8584;8585;8586;8587;8588;8589;8590 8584 SHGIDLDHNR 10 0 1 Unmodified _SHGIDLDHNR_ 0 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JVD8;C9J578;C9J9E4 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 587.2854 2 582.281243 1162.54793 80769.38 1.1448 0.00066658 -0.7436 -0.00043298 0.40117 0.0002336 582.280753902576 587.2849514555 96.015 0.78719 96.015 95.757 96.544 -7.6294E-06 190 67 4 0 0 0 0.0063498 2 54041 73.985 48.248 1 0.77408 0.94457 0 21402000 11460000 9942200 5257 1220 2711 3007 8591;8592 8592 SHGIDLDHNR 10 0 1 Unmodified _SHGIDLDHNR_ 0 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JVD8;C9J578;C9J9E4 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 391.8595 3 388.523254 1162.54793 95172.73 0.12367 4.8048E-05 -0.38788 -0.0001507 -0.26421 -0.00010265 388.523061137935 391.859188692153 18.326 0.2719 18.326 18.203 18.475 0 69 12 8 0 0 0 0.000222 2 5423 74.944 60.265 1 1.5689 1.1567 0 23640000 9854500 13785000 5258 1220 2711 3007 8593;8594 8593 SHGIDLDHNR 10 0 1 Unmodified _SHGIDLDHNR_ 0 0 0 0 Q9NTJ3;E9PD53;B3KXX5;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JVD8;C9J578;C9J9E4 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 587.2856 2 582.281243 1162.54793 80948.62 0.6397 0.00037249 -0.5979 -0.00034815 0.041796 2.4337E-05 582.280838211084 587.285029348952 18.308 0.22425 18.308 18.203 18.427 0 39 10 5 0 0 0 0.024324 1 5438 62.005 45.229 1 1.7595 1.4491 0 5919100 2308400 3610700 5259 1220 2711 3007 8595 8595 SHHAPMSPGSSGGGGQPLAR 20 0 1 Oxidation (M),Phospho (STY) _SHHAPM(ox)S(ph)PGSSGGGGQPLAR_ SHHAPM(1)SPGSSGGGGQPLAR S(0.001)HHAPMS(0.998)PGS(0.001)SGGGGQPLAR SHHAPM(69.7)SPGSSGGGGQPLAR S(-29.42)HHAPMS(29.42)PGS(-29.56)S(-37.88)GGGGQPLAR 0 1 1 0 A0A0S2Q0B1;O14497;Q4LE49 A0A0S2Q0B1 A0A0S2Q0B1 ARID1A;ARID1A variant protein AT-rich interactive domain-containing protein 1A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 665.2916 3 661.95455 1982.84182 74012.4 0.8606 0.00056968 -0.26491 -0.00017536 0.59569 0.00039432 662.288700480675 665.290590180986 19.015 0.52353 19.015 18.813 19.336 1.9073E-06 145 22 11 0 0 0 4.1887E-08 2 6011 69.704 59.445 4 1.8714 1.2567 0 104540000 35652000 68887000 5260 344 2712 3008 8596;8597 8597 80 542 SHILTHAK 8 1 0 Unmodified _SHILTHAK_ 0 0 0 0 P25490;H0YJV7 P25490 P25490 YY1 Transcriptional repressor protein YY1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 454.2409 2 453.761426 905.5083 NaN NaN NaN -0.24741 -0.00011227 NaN NaN NaN NaN 93.049 1.523 93.049 92.279 93.802 0 0 0 0 5.3813E-16 1 51895 110.67 68.783 1 NaN NaN 0 17568000 17568000 0 5261 977 2713 3009 8598 8598 SHISDQSPLSSK 12 1 0 Phospho (STY) _SHISDQS(ph)PLSSK_ SHIS(0.002)DQS(0.972)PLS(0.021)S(0.005)K S(-64.63)HIS(-26.68)DQS(16.66)PLS(-16.66)S(-22.8)K 0 0 1 0 P42166 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 687.3138 2 683.305939 1364.59732 73212.84 0.69342 0.00047382 0.46773 0.0003196 1.1611 0.00079342 683.306095904277 687.313954491193 60.094 0.80783 60.094 59.61 60.418 3.8147E-06 175 45 9 0 0 0 0.00032309 1 27177 85.976 70.945 5 1.0075 1.2718 0 47372000 24248000 23124000 5262 989 2714 3010 8599 8599 1752 SHISDQSPLSSK 12 1 0 Phospho (STY) _SHISDQS(ph)PLSSK_ SHISDQS(0.999)PLS(0.001)SK S(-152.86)HIS(-81.97)DQS(29.15)PLS(-29.15)S(-54.53)K 0 0 1 0 P42166 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 683.3068 2 683.305939 1364.59732 NaN NaN NaN 0.26569 0.00018154 NaN NaN NaN NaN 25.288 0.44003 25.288 25.098 25.538 -1.9073E-06 0 0 0 1.0152E-149 1 11516 196.18 156.6 5 NaN NaN 0 25105000 25105000 0 5263 989 2714 3010 8600 8600 1752 SHLFFTAGK 9 1 0 Unmodified _SHLFFTAGK_ 0 0 0 0 Q5TDG3;Q9UNX4;Q59GA8;B3KMW5 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 508.2762 2 504.269084 1006.52362 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.18 1 113.18 112.68 113.68 7.6294E-06 0 0 0 0.017707 1 67210 48.794 12.399 1 5264 1107 2715 3011 8601 8601 SHLFFTAGK 9 1 0 Unmodified _SHLFFTAGK_ 0 0 0 0 Q5TDG3;Q9UNX4;Q59GA8;B3KMW5 Q5TDG3 Q5TDG3 WDR3 WD repeat-containing protein 3 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 504.2689 2 504.269084 1006.52362 NaN NaN NaN NaN NaN NaN NaN NaN NaN 113.27 1 113.27 112.77 113.77 7.6294E-06 0 0 0 0.026934 1 67274 43.982 14.9 1 5265 1107 2715 3011 8602 8602 SHPELENVK 9 1 0 Phospho (STY) _S(ph)HPELENVK_ S(1)HPELENVK S(41.16)HPELENVK 0 0 1 0 Q9NSI6 Q9NSI6 Q9NSI6 BRWD1 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 566.7551 2 566.755353 1131.49615 80790.55 0.47602 0.00026979 0.11585 6.566E-05 0.59187 0.00033545 566.75513821663 570.762196592384 58.458 0.96836 58.458 57.914 58.882 3.8147E-06 366 77 7 0 0 0 0.02848 1 25618 41.164 28.209 1 0.61679 0.7822 0 35999000 21218000 14780000 5266 1218 2716 3012 8603 8603 2464 SHPELENVK 9 1 0 Phospho (STY) _S(ph)HPELENVK_ S(1)HPELENVK S(89.36)HPELENVK 0 0 1 0 Q9NSI6 Q9NSI6 Q9NSI6 BRWD1 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 566.7562 2 566.755353 1131.49615 80359.6 0.54431 0.00030849 0.50243 0.00028475 1.0467 0.00059324 566.755628655204 570.762653061947 26.778 0.53355 26.778 26.578 27.112 0 91 25 6 0 0 0 0.00014212 1 12808 89.356 68.657 1 1.2034 0.79841 0 77881000 36352000 41529000 5267 1218 2716 3012 8604 8604 2464 SHSGVSENDSRPASPSAESDHESER 25 0 2 Phospho (STY) _SHSGVSENDS(ph)RPASPSAESDHESER_ SHSGVS(0.021)ENDS(0.459)RPAS(0.459)PS(0.057)AES(0.003)DHESER S(-50.99)HS(-38.53)GVS(-13.39)ENDS(0)RPAS(0)PS(-9.04)AES(-22.57)DHES(-33.27)ER 0 0 1 1 A8K6X9;Q6PD62 A8K6X9 A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 684.5302 4 684.279773 2733.08999 74436.66 0.66259 0.0004534 -0.039307 -2.6897E-05 0.62329 0.0004265 684.530304984883 689.534760437977 64.278 0.48274 64.278 64.093 64.576 0 153 33 9 0 0 0 3.181E-13 1 30577 60.101 55.045 8 1.5451 1.9212 0 76360000 30254000 46105000 5268 486 2717 3013 8605 8605 837;838 SHTVAIDNQIFK 12 1 0 Phospho (STY) _SHT(ph)VAIDNQIFK_ SHT(1)VAIDNQIFK S(-37.19)HT(37.19)VAIDNQIFK 0 0 1 0 E9PPJ1;Q8NG31 E9PPJ1 E9PPJ1 CASC5 Protein CASC5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 726.8494 2 726.847774 1451.68099 73040.66 1.2684 0.00092192 -0.090878 -6.6054E-05 1.1775 0.00085587 727.349197981199 730.854647115409 99.527 1.1888 99.527 98.899 100.09 0 428 101 6 0 0 0 6.8746E-32 2 56704 152.99 137.6 2 0.67387 0.85535 0 40420000 23935000 16485000 5269 814 2718 3014 8606;8607 8606 2831 SHTVAIDNQIFK 12 1 0 Phospho (STY) _SHT(ph)VAIDNQIFK_ SHT(1)VAIDNQIFK S(-42.81)HT(42.81)VAIDNQIFK 0 0 1 0 E9PPJ1;Q8NG31 E9PPJ1 E9PPJ1 CASC5 Protein CASC5 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 730.8552 2 726.847774 1451.68099 71849.92 1.0296 0.00074835 0.25939 0.00018854 1.289 0.00093689 726.848009565677 730.854969801363 91.688 1.4477 91.688 91.093 92.541 0 791 143 7 0 0 0 2.4889E-41 2 59274 163.99 149.3 2 1.1637 0.75897 0 43640000 19543000 24097000 5270 814 2718 3014 8608;8609 8608 2831 SHVEDGDIAGAPASSPEAPPAEQDPVQLK 29 1 0 Phospho (STY) _SHVEDGDIAGAPAS(ph)SPEAPPAEQDPVQLK_ SHVEDGDIAGAPAS(0.5)S(0.5)PEAPPAEQDPVQLK S(-45.46)HVEDGDIAGAPAS(0)S(0)PEAPPAEQDPVQLK 0 0 1 0 A1A5C4;A0A087WVV2;A0A0A0MRV0;A7BI36;Q9P2E9;F8W7S5;A1A5C5;B3KSG1;A0A087WU26 A1A5C4 A1A5C4 RRBP1 Ribosome-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 998.4597 3 998.123906 2991.34989 60912.78 0.73086 0.00072949 0.57882 0.00057773 1.3097 0.0013072 998.459095309921 1001.12986908104 97.948 0.87755 97.948 97.448 98.326 7.6294E-06 424 72 9 0 0 0 2.7664E-16 1 55388 57.803 57.803 3 1.2506 1.5632 0 65205000 31096000 34109000 5271 256 2719 3015 8610 8610 404;405 SHVTEEEEEEEEEESDS 17 0 0 Phospho (STY) _SHVTEEEEEEEEEES(ph)DS_ SHVTEEEEEEEEEES(0.5)DS(0.5) S(-54.47)HVT(-50.46)EEEEEEEEEES(0)DS(0) 0 0 1 0 A0A024R5X1;O75971 A0A024R5X1 A0A024R5X1 SNAPC5 snRNA-activating protein complex subunit 5 MSMS -1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1051.8566 2 1051.85771 2101.70086 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.172 1 49.172 48.672 49.672 0 0 0 0 0.00051013 1 19529 54.471 48.626 4 5272 113 2720 3016 8611 8611 163;164 SHVTEEEEEEEEEESDS 17 0 0 Phospho (STY) _SHVTEEEEEEEEEES(ph)DS_ SHVTEEEEEEEEEES(0.5)DS(0.5) S(-45.88)HVT(-41.87)EEEEEEEEEES(0)DS(0) 0 0 1 0 A0A024R5X1;O75971 A0A024R5X1 A0A024R5X1 SNAPC5 snRNA-activating protein complex subunit 5 MSMS -1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1051.8567 2 1051.85771 2101.70086 NaN NaN NaN NaN NaN NaN NaN NaN NaN 49.937 1 49.937 49.437 50.437 0 0 0 0 0.0017191 1 20015 45.879 36.091 4 5273 113 2720 3016 8612 8612 163;164 SIAFPSIGSGR 11 0 1 Unmodified _SIAFPSIGSGR_ 0 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 551.3 2 546.29583 1090.57711 89697.1 1.1688 0.00063854 -0.76857 -0.00041986 0.40028 0.00021867 546.295107351176 551.29945854926 102.75 0.42342 102.75 102.53 102.95 0 72 30 4 0 0 0 0.025232 1 59119 61.65 30.576 1 1.0453 1.1439 0 6209900 2222100 3987700 5274 935 2721 3017 8613 8613 SIAFPSIGSGR 11 0 1 Unmodified _SIAFPSIGSGR_ 0 0 0 0 O75367;Q59FH0;B4DJC3 O75367 O75367 H2AFY Core histone macro-H2A.1;Histone H2A MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 546.2964 2 546.29583 1090.57711 NaN NaN NaN NaN NaN NaN NaN NaN NaN 102.58 1 102.58 102.08 103.08 0 0 0 0 0.0069424 1 59132 52.49 21.416 1 5275 935 2721 3017 8614 8614 SIDAVIATASAPPSSSPGR 19 0 1 Phospho (STY) _SIDAVIATASAPPS(ph)SSPGR_ SIDAVIATAS(0.005)APPS(0.332)S(0.332)S(0.332)PGR S(-93.47)IDAVIAT(-33.2)AS(-18.44)APPS(0)S(0)S(0)PGR 0 0 1 0 Q9NR48 Q9NR48 Q9NR48 ASH1L Histone-lysine N-methyltransferase ASH1L ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 932.4478 2 932.446037 1862.87752 NaN NaN NaN -0.14712 -0.00013718 NaN NaN NaN NaN 97.207 0.29805 97.207 97.034 97.332 0 0 0 0 1.047E-21 1 54954 104.89 82.174 6 NaN NaN 0 7956600 7956600 0 5276 1215 2722 3018 8615 8615 2445;2446;2447 SIDISATIPK 10 1 0 Phospho (STY) _S(ph)IDISATIPK_ S(0.979)IDIS(0.021)ATIPK S(16.7)IDIS(-16.7)AT(-35.33)IPK 0 0 1 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1125.0017 1 1124.55988 1123.55261 60138.4 0.62502 0.00070287 0.074733 8.4042E-05 0.69975 0.00078691 1124.55996961114 1132.5741119998 105.22 0.74921 105.22 104.84 105.59 -7.6294E-06 178 51 5 0 0 0 0.0018149 1 60775 59.418 49.763 3 0.6757 0.81905 0 17496000 10134000 7361600 5277 464 2723 3019 8616 8616 806;807 SIDISATIPK 10 1 0 Phospho (STY) _S(ph)IDISATIPK_ S(1)IDISATIPK S(52.58)IDIS(-52.58)AT(-67.18)IPK 0 0 1 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 562.7841 2 562.783579 1123.55261 81615.64 1.0024 0.00056412 -0.16395 -9.2268E-05 0.83842 0.00047185 562.783499440592 566.790523569942 105.25 0.93377 105.25 104.72 105.66 0 271 63 6 0 0 0 2.521E-05 1 60861 94.82 69.694 3 0.66898 0.84176 0 29129000 18357000 10772000 5278 464 2723 3019 8617 8617 806;807 SIDISATIPK 10 1 0 Phospho (STY) _SIDIS(ph)ATIPK_ SIDIS(0.57)AT(0.43)IPK S(-69.36)IDIS(1.23)AT(-1.23)IPK 0 0 1 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 562.7841 2 562.783579 1123.55261 81207.84 0.86366 0.00048605 -0.62426 -0.00035132 0.2394 0.00013473 562.783314888948 566.790528814639 106.26 0.96577 106.26 105.79 106.75 0 260 66 6 0 0 0 0.00040251 1 61585 87.184 59.93 3 0.55911 0.70819 0 42979000 28816000 14162000 5279 464 2723 3019 8618 8618 806;807 SIDISATIPK 10 1 0 Phospho (STY) _S(ph)IDISATIPK_ S(0.501)IDIS(0.25)AT(0.25)IPK S(3.02)IDIS(-3.02)AT(-3.02)IPK 0 0 1 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 562.7833 2 562.783579 1123.55261 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.68 1 111.68 111.18 112.18 -7.6294E-06 0 0 0 0.02151 1 71853 40.002 15.079 3 5280 464 2723 3019 8619 8619 806;807 SIGAASPRPQSLEK 14 1 1 2 Phospho (STY) _SIGAAS(ph)PRPQS(ph)LEK_ S(0.001)IGAAS(0.999)PRPQS(1)LEK S(-30.75)IGAAS(30.75)PRPQS(70)LEK 0 0 2 1 B2RWP5;Q96L73;Q9H6H8;Q658U6;Q9H6B5;A0A1D8GZ55;A0A1D8GZ56 B2RWP5 B2RWP5 NSD1;DKFZp666C163 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 800.8611 2 800.860228 1599.7059 67412.71 0.99959 0.00080053 0.40211 0.00032203 1.4017 0.0011226 800.859937631823 809.87206898464 60.668 1.5496 60.668 60.112 61.662 3.8147E-06 438 112 7 0 0 0 3.5125E-05 1 27498 79.652 67.269 3 0.4256 0.50615 0 73146000 51353000 21793000 5281 565 2724 3020 8620 8620 938;939 SIGAASPRPQSLEK 14 1 1 2 Phospho (STY) _SIGAAS(ph)PRPQS(ph)LEK_ S(0.007)IGAAS(0.993)PRPQS(1)LEK S(-21.59)IGAAS(21.59)PRPQS(53.75)LEK 0 0 2 1 B2RWP5;Q96L73;Q9H6H8;Q658U6;Q9H6B5;A0A1D8GZ55;A0A1D8GZ56 B2RWP5 B2RWP5 NSD1;DKFZp666C163 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 800.8613 2 800.860228 1599.7059 67853.46 1.2572 0.0010068 -0.23551 -0.00018861 1.0217 0.0008182 800.859783387149 809.871185553538 56.931 1.2957 56.931 56.125 57.42 -3.8147E-06 576 110 8 0 0 0 0.0009224 1 34790 66.809 55.101 3 1.3136 1.0136 0 78214000 35308000 42905000 5282 565 2724 3020 8621 8621 938;939 SIHFSSPVFTSR 12 0 1 Acetyl (Protein N-term),Phospho (STY) _(ac)SIHFSS(ph)PVFTSR_ SIHFS(0.071)S(0.866)PVFT(0.024)S(0.039)R S(-48.06)IHFS(-10.88)S(10.88)PVFT(-15.56)S(-13.46)R 1 0 1 0 B3KY79;CON__P08729;CON__Q3KNV1;P08729 B3KY79 B3KY79 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 743.8402 2 743.839949 1485.66534 71066.71 0.86311 0.00064201 0.46238 0.00034393 1.3255 0.00098595 743.840040632767 748.844104708192 113.81 0.80473 113.81 113.45 114.25 0 323 70 6 0 0 0 0.0062958 1 67473 67.019 54.813 5 0.76654 0.96434 0 46184000 27289000 18895000 + 5283 613 2725 3021 8622 8622 1013;1014 SIHFSSPVFTSR 12 0 1 Acetyl (Protein N-term),Phospho (STY) _(ac)SIHFSS(ph)PVFTSR_ SIHFS(0.24)S(0.675)PVFT(0.036)S(0.049)R S(-44.66)IHFS(-4.49)S(4.49)PVFT(-12.68)S(-11.38)R 1 0 1 0 B3KY79;CON__P08729;CON__Q3KNV1;P08729 B3KY79 B3KY79 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 748.8445 2 743.839949 1485.66534 71194.46 1.1768 0.00087536 0.28914 0.00021507 1.4659 0.0010904 743.840117450835 748.844093331761 120.62 0.91129 120.62 120.19 121.11 -7.6294E-06 427 81 7 0 0 0 0.011969 1 77701 52.101 52.101 5 1.1845 0.82702 0 36821000 18115000 18705000 + 5284 613 2725 3021 8623 8623 1013;1014 SIHFSSPVFTSR 12 0 1 Acetyl (Protein N-term),2 Phospho (STY) _(ac)S(ph)IHFSS(ph)PVFTSR_ S(1)IHFS(0.002)S(0.998)PVFTSR S(82.08)IHFS(-27.71)S(27.71)PVFT(-36.08)S(-43.17)R 1 0 2 0 B3KY79;CON__P08729;CON__Q3KNV1;P08729 B3KY79 B3KY79 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 788.8274 2 783.823114 1565.63167 70723.23 0.79085 0.00061989 -0.029333 -2.2992E-05 0.76152 0.0005969 783.823294898709 788.827045834287 121.78 0.80988 121.78 121.43 122.24 7.6294E-06 307 60 8 0 0 0 7.3214E-20 3 73490 130.61 119.39 10 1.0596 1.3099 0 33602000 15119000 18483000 + 5285 613 2725 3022 8624;8625;8626 8625 1013;1014 SILAKPSSSPDPR 13 1 1 Phospho (STY) _SILAKPS(ph)SSPDPR_ SILAKPS(0.333)S(0.333)S(0.333)PDPR S(-42.27)ILAKPS(0)S(0)S(0)PDPR 0 0 1 1 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 726.8659 2 717.853056 1433.69156 73504.56 0.69067 0.0004958 0.22439 0.00016108 0.91506 0.00065688 718.35471326899 726.864121104032 64.997 0.37648 64.997 64.843 65.219 0 75 26 4 0 0 0 0.0017483 2 31104 68.809 51.886 4 0.85926 0.96275 0 18005000 10368000 7636700 5286 1195 2726 3023 8627;8628 8627 2370;2371;2372 SILAKPSSSPDPR 13 1 1 Phospho (STY) _SILAKPS(ph)SSPDPR_ SILAKPS(0.333)S(0.333)S(0.333)PDPR S(-48.12)ILAKPS(0)S(0)S(0)PDPR 0 0 1 1 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 726.8652 2 717.853056 1433.69156 72383.76 1.0533 0.0007561 0.020871 1.4982E-05 1.0741 0.00077108 717.853096196863 726.864214918393 41.307 3.0828 41.307 40.312 43.395 0 1327 269 8 0 0 0 0.00020892 2 24439 80.746 64.99 4 2.02 1.558 0 61658000 19544000 42114000 5287 1195 2726 3023 8629;8630 8629 2370;2371;2372 SILESSPR 8 0 1 Phospho (STY) _SILES(ph)SPR_ SILES(0.5)S(0.5)PR S(-45.22)ILES(0)S(0)PR 0 0 1 0 D0QYQ9;E9PQQ2;E9PJF1;D0QYQ8;E9PLN0;Q708E1;Q708E9;Q70AC3;A0A087WTI6;D0QYR0;Q708J0;Q708E2;F8W8G5;P10242 D0QYQ9 D0QYQ9 MYB/NFIB fusion;MYB;c-myb Transcriptional activator Myb ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 968.45 1 968.444853 967.437576 NaN NaN NaN 2.7838 0.0026959 NaN NaN NaN NaN 90.569 1.2793 90.569 90.033 91.312 0 0 0 0 0.010996 1 49865 49.536 18.867 3 NaN NaN 0 22286000 22286000 0 5288 244 2727 3024 8631 8631 383;384 SILESSPR 8 0 1 Phospho (STY) _SILES(ph)SPR_ SILES(0.5)S(0.5)PR S(-46.37)ILES(0)S(0)PR 0 0 1 0 D0QYQ9;E9PQQ2;E9PJF1;D0QYQ8;E9PLN0;Q708E1;Q708E9;Q70AC3;A0A087WTI6;D0QYR0;Q708J0;Q708E2;F8W8G5;P10242 D0QYQ9 D0QYQ9 MYB/NFIB fusion;MYB;c-myb Transcriptional activator Myb ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 968.4458 1 968.444853 967.437576 NaN NaN NaN -0.067388 -6.5262E-05 NaN NaN NaN NaN 99.161 1.3115 99.161 98.617 99.928 0 0 0 0 0.01286 1 63681 47.574 24.221 3 NaN NaN 0 24056000 24056000 0 5289 244 2727 3024 8632 8632 383;384 SILPYPVSPK 10 1 0 Phospho (STY) _SILPYPVS(ph)PK_ SILPYPVS(1)PK S(-57.23)ILPY(-34.08)PVS(34.08)PK 0 0 1 0 B9EGR5;Q8IWI9;Q9H6M4;H3BP52;H3BTF4 B9EGR5 B9EGR5 MGA MAX gene-associated protein ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 594.8113 2 590.804315 1179.59408 NaN NaN NaN 0.374 0.00022096 NaN NaN NaN NaN 111.67 0.91063 111.67 111.29 112.2 7.6294E-06 0 0 0 0.001813 1 65945 67.456 25.564 3 NaN NaN 0 18454000 0 18454000 5290 732 2728 3025 8633 8633 1227 SILPYPVSPK 10 1 0 Phospho (STY) _SILPYPVS(ph)PK_ SILPYPVS(1)PK S(-65.71)ILPY(-35.08)PVS(35.08)PK 0 0 1 0 B9EGR5;Q8IWI9;Q9H6M4;H3BP52;H3BTF4 B9EGR5 B9EGR5 MGA MAX gene-associated protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 594.8121 2 590.804315 1179.59408 78789.75 1.0923 0.00064532 -0.1366 -8.0703E-05 0.95568 0.00056462 590.804140893719 594.81122859934 117.78 1.1005 117.78 117.29 118.39 0 554 102 7 0 0 0 0.0053237 3 75723 66.498 43.069 3 1.305 0.84665 0 33623000 14928000 18695000 5291 732 2728 3025 8634;8635;8636 8634 1227 SILSPGGSCGPIK 13 1 0 Phospho (STY) _SILS(ph)PGGSCGPIK_ SILS(1)PGGSCGPIK S(-54.87)ILS(37.71)PGGS(-37.71)CGPIK 0 0 1 0 X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347;X5D7Q9 X5D2J9 X5D2J9 GTF2I General transcription factor II-I MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 680.8256 2 676.817628 1351.6207 73635.18 1.0918 0.00073892 0.0068657 4.6469E-06 1.0986 0.00074356 676.817568334492 680.824690508348 100.49 1.4077 100.49 99.724 101.13 -7.6294E-06 641 133 7 0 0 0 1.3678E-06 2 64642 96.866 72.611 3 2.0659 1.3405 0 33602000 10896000 22706000 5292 506 2729 3026 8637;8638 8638 870 SILVSPTGPSR 11 0 1 Phospho (STY) _SILVS(ph)PTGPSR_ SILVS(0.996)PT(0.004)GPSR S(-71.87)ILVS(24.25)PT(-24.25)GPS(-39.79)R 0 0 1 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 597.301 2 597.299928 1192.5853 77934.77 0.81892 0.00048914 -0.12961 -7.7413E-05 0.68932 0.00041173 597.299888991592 602.303938571225 80.828 2.0944 80.828 79.926 82.021 0 1106 192 8 0 0 0 9.3769E-06 5 42879 96.745 74.024 4 0.96719 1.2242 0 398560000 197950000 200610000 5293 1060 2730 3027 8639;8640;8641;8642;8643 8641 1988 SILVSPTGPSR 11 0 1 Phospho (STY) _SILVS(ph)PTGPSR_ SILVS(0.843)PT(0.042)GPS(0.114)R S(-68.51)ILVS(8.69)PT(-12.98)GPS(-8.69)R 0 0 1 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 602.3038 2 597.299928 1192.5853 78102.4 1.0092 0.00060281 -0.14963 -8.9372E-05 0.85961 0.00051344 597.300205234547 602.30398097949 81.524 2.4825 81.524 80.927 83.409 0 1182 230 10 0 0 0 0.0016904 6 51901 76.073 52.847 4 1.9606 1.258 0 1009500000 338300000 671230000 5294 1060 2730 3027 8644;8645;8646;8647;8648;8649 8644 1988 SILVSPTGPSR 11 0 1 Phospho (STY) _SILVS(ph)PTGPSR_ SILVS(0.693)PT(0.128)GPS(0.179)R S(-45.27)ILVS(5.88)PT(-7.33)GPS(-5.88)R 0 0 1 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 602.3041 2 597.299928 1192.5853 NaN NaN NaN -0.48734 -0.00029109 NaN NaN NaN NaN 83.912 0.4809 83.912 83.813 84.294 0 0 0 0 0.012494 1 54081 49.423 17.094 4 NaN NaN 0 2910000 0 2910000 5295 1060 2730 3027 8650 8650 1988 SINHQIESPSER 12 0 1 Phospho (STY) _SINHQIES(ph)PSER_ SINHQIES(0.973)PS(0.027)ER S(-76.06)INHQIES(15.58)PS(-15.58)ER 0 0 1 0 B7Z7Z0;B7Z656;B7Z3F1;B7Z3G0;B7Z5Q8;E7EPK0;E9PDJ9;B7Z2J4;H0Y8P3;D6RD46;G5EA03;Q9UPQ0 B7Z7Z0 B7Z7Z0 LIMCH1 LIM and calponin homology domains-containing protein 1 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 743.8323 2 738.82757 1475.64059 NaN NaN NaN -0.31589 -0.00023339 NaN NaN NaN NaN 25.263 0.30567 25.263 25.117 25.423 -1.9073E-06 0 0 0 6.1742E-06 1 11529 89.466 68.596 3 NaN NaN 0 7161900 0 7161900 5296 700 2731 3028 8651 8651 1156 SIPLECPLSSPK 12 1 0 Phospho (STY) _SIPLECPLS(ph)SPK_ SIPLECPLS(0.5)S(0.5)PK S(-41.59)IPLECPLS(0)S(0)PK 0 0 1 0 I3L2A2;I3L2N7;A0A140VK05;B4DN86;Q92667 I3L2A2 I3L2A2 AKAP1 A-kinase anchor protein 1, mitochondrial MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 708.3411 2 704.333111 1406.65167 73495.3 1.09 0.00076774 -0.2188 -0.00015411 0.87123 0.00061364 704.33283042022 708.340251322542 105.18 0.97807 105.18 104.74 105.72 0 330 89 5 0 0 0 0.014204 1 67425 42.789 27.401 3 3.3492 2.608 0 14451000 3444900 11006000 5297 381 2732 3029 8652 8652 599;600 SIRPDNMSEYSK 12 1 1 Oxidation (M) _SIRPDNM(ox)SEYSK_ SIRPDNM(1)SEYSK SIRPDNM(70.62)SEYSK 0 1 0 1 B3KUJ5;Q92769;E5RFI6;E5RJ04;E5RGV4;E5RHE7;E5RH52;E5RG37;E5RFP9;H3BM24;Q6IT96;B5BU61;Q13547;Q5TEE2;B4DSK9;B7Z3S4 B3KUJ5;Q6IT96 B3KUJ5 HDAC2;HDAC1 Histone deacetylase;Histone deacetylase 2;Histone deacetylase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 487.5651 3 481.557524 1441.65074 85774.34 0.38289 0.00018438 -0.45326 -0.00021827 -0.07037 -3.3887E-05 481.557422311406 487.564980962524 63.738 1.154 63.738 62.802 63.956 0 390 94 9 0 0 0 0.0056344 2 30092 70.622 54.089 1 1.1801 1.4082 0 94963000 44889000 50074000 5298 601;690 2733 3030 8653;8654 8654 156 SIRPLLEGR 9 0 2 Unmodified _SIRPLLEGR_ 0 0 0 1 Q4ZG72;A0A024RAH8;Q9NVP1 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 354.2174 3 347.545219 1039.61383 105824.6 0.095842 3.331E-05 -0.19973 -6.9414E-05 -0.10388 -3.6104E-05 347.545124336229 354.21733342684 105.83 0.79526 105.83 105.3 106.09 0 101 53 4 0 0 0 0.02094 1 61483 57.785 37.795 1 1.0887 1.2991 0 13388000 6244800 7143200 5299 182 2734 3031 8655 8655 SISDVTFGAGVSYIGTPR 18 0 1 2 Phospho (STY) _S(ph)IS(ph)DVTFGAGVSYIGTPR_ S(0.885)IS(0.885)DVT(0.23)FGAGVSYIGTPR S(8.27)IS(8.27)DVT(-8.27)FGAGVS(-57.34)Y(-64.2)IGT(-71.46)PR 0 0 2 0 P42695;Q96FA6 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 993.9344 2 993.934121 1985.85369 60532.96 0.60478 0.00060111 -0.13161 -0.00013081 0.47317 0.0004703 993.934325929492 998.937826441865 130.05 0.72493 130.05 129.71 130.44 -1.5259E-05 380 67 7 0 0 0 6.1947E-08 2 78915 77.078 77.078 15 0.8545 1.0502 0 30491000 16454000 14038000 5300 991 2735 3032 8656;8657 8657 1759;1760 SISPEVSASR 10 0 1 Phospho (STY) _SIS(ph)PEVSASR_ S(0.004)IS(0.996)PEVSASR S(-24.52)IS(24.52)PEVS(-33.05)AS(-36.78)R 0 0 1 0 Q9Y2F5 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 556.7529 2 556.752811 1111.49107 NaN NaN NaN NaN NaN NaN NaN NaN NaN 50.742 1 50.742 50.242 51.242 0 0 0 0 0.00924 1 20541 47.991 27.214 4 5301 1246 2736 3033 8658 8658 2561 SISPEVSASR 10 0 1 Phospho (STY) _SIS(ph)PEVSASR_ S(0.002)IS(0.996)PEVS(0.001)AS(0.001)R S(-26.76)IS(26.76)PEVS(-30.63)AS(-29.46)R 0 0 1 0 Q9Y2F5 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 556.7524 2 556.752811 1111.49107 84258.91 0.82879 0.00046143 -0.64067 -0.0003567 0.18812 0.00010474 556.75182301303 561.756834714827 41.649 0.63297 41.649 41.345 41.978 0 188 54 5 0 0 0 0.016058 1 24325 46.001 27.943 4 1.0748 0.88059 0 6256100 2555200 3700900 5302 1246 2736 3033 8659 8659 2561 SIYFSSPK 8 1 0 Phospho (STY) _SIYFS(ph)SPK_ SIYFS(0.5)S(0.5)PK S(-54.74)IY(-36.47)FS(0)S(0)PK 0 0 1 0 A2IDA3;Q1W6H1;P29372 A2IDA3 A2IDA3 MPG DNA-3-methyladenine glycosylase MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 508.7327 2 504.725533 1007.43651 85491.91 0.53262 0.00026883 0.12383 6.2499E-05 0.65645 0.00033132 504.725509677234 508.732576261166 73.339 2.1724 73.339 72.016 74.189 0 888 193 6 0 0 0 0.010586 5 46861 63.076 39.045 4 0.5986 0.38882 0 36913000 23567000 13346000 5303 407 2737 3034 8660;8661;8662;8663;8664 8664 697;698 SKAEAESLYQSK 12 2 0 Unmodified _SKAEAESLYQSK_ 0 0 0 1 H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRG2 H6VRG3;H6VRG2 H6VRG2 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 670.8384 2 670.838256 1339.66196 NaN NaN NaN 0.64421 0.00043216 NaN NaN NaN NaN 22.305 0.2637 22.305 22.173 22.436 0 0 0 0 1.4802E-14 1 8955 108.32 73.172 1 NaN NaN 0 7740700 7740700 0 + 5304 876;877 2738 3035 8665 8665 SKDEEEDEESDDADDTPILK 20 2 0 Phospho (STY) _SKDEEEDEES(ph)DDADDTPILK_ S(0.023)KDEEEDEES(0.976)DDADDT(0.001)PILK S(-16.23)KDEEEDEES(16.23)DDADDT(-29.43)PILK 0 0 1 1 A5PKX7;Q92794;C9K0F9 A5PKX7 A5PKX7 MYST3;KAT6A Histone acetyltransferase;Histone acetyltransferase KAT6A ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 792.6548 3 787.311005 2358.91119 NaN NaN NaN 0.60353 0.00047517 NaN NaN NaN NaN 79.58 0.16106 79.58 79.492 79.653 0 0 0 0 4.7647E-05 1 41990 48.053 41.477 3 NaN NaN 0 8129400 0 8129400 5305 423 2739 3036 8666 8666 732 SKDEEEDEESDDADDTPILK 20 2 0 Phospho (STY) _SKDEEEDEES(ph)DDADDTPILK_ S(0.005)KDEEEDEES(0.993)DDADDT(0.001)PILK S(-22.77)KDEEEDEES(22.77)DDADDT(-28.63)PILK 0 0 1 1 A5PKX7;Q92794;C9K0F9 A5PKX7 A5PKX7 MYST3;KAT6A Histone acetyltransferase;Histone acetyltransferase KAT6A MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 787.3111 3 787.311005 2358.91119 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.553 1 79.553 79.053 80.053 0 0 0 0 0.00025325 1 41957 52.541 46.961 3 5306 423 2739 3036 8667 8667 732 SKEEAEALYHSK 12 2 0 Unmodified _SKEEAEALYHSK_ 0 0 0 1 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 464.5647 3 464.564896 1390.67286 NaN NaN NaN -0.25878 -0.00012022 NaN NaN NaN NaN 91.96 0.5958 91.96 91.65 92.246 0 0 0 0 0.0057975 1 50739 71.933 54.46 1 NaN NaN 0 11867000 11867000 0 + 5307 758 2740 3037 8668 8668 SKEEAEALYHSK 12 2 0 Unmodified _SKEEAEALYHSK_ 0 0 0 1 CON__P35908;P35908 CON__P35908 CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 464.5656 3 464.564896 1390.67286 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.92 1 90.92 90.42 91.42 0 0 0 0 0.028605 1 50116 32.068 23.891 1 + 5308 758 2740 3037 8669 8669 SKEEESVHVTQR 12 1 1 Unmodified _SKEEESVHVTQR_ 0 0 0 1 B7Z8A5;B7ZAI3;Q9UBD5;Q6IBJ0;B4DZ51 B7Z8A5 B7Z8A5 ORC3;ORC3L Origin recognition complex subunit 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 482.9147 3 476.907433 1427.70047 88907.12 0.42793 0.00020408 -0.13124 -6.2589E-05 0.29669 0.00014149 476.907237782933 482.914982109987 76.679 0.85023 76.679 76.181 77.032 0 148 72 4 0 0 0 0.027285 1 39628 43.813 33.691 1 1.7307 2.039 0 43290000 22133000 21157000 5309 715 2741 3038 8670 8670 SKGESDDFHMDFDSAVAPR 19 1 1 Oxidation (M),Phospho (STY) _SKGES(ph)DDFHM(ox)DFDSAVAPR_ SKGESDDFHM(1)DFDSAVAPR SKGES(1)DDFHMDFDSAVAPR SKGESDDFHM(132.84)DFDSAVAPR S(-46.05)KGES(46.05)DDFHMDFDS(-97.3)AVAPR 0 1 1 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 742.3046 3 736.296419 2205.86743 70453.12 1.3377 0.00098494 -0.48519 -0.00035724 0.85251 0.0006277 736.296190166447 742.303784497725 96.112 2.4463 96.112 94.53 96.977 0 1343 203 10 0 0 0 5.5668E-47 3 54398 132.84 120.99 3 0.66924 0.80959 0 271440000 164500000 106940000 5310 962 2742 3039 8671;8672;8673 8673 266 1690;1691;1700 SKGESDDFHMDFDSAVAPR 19 1 1 Oxidation (M),Phospho (STY) _SKGES(ph)DDFHM(ox)DFDSAVAPR_ SKGESDDFHM(1)DFDSAVAPR S(0.013)KGES(0.987)DDFHMDFDSAVAPR SKGESDDFHM(62.08)DFDSAVAPR S(-18.76)KGES(18.76)DDFHMDFDS(-50.56)AVAPR 0 1 1 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 742.6399 3 736.296419 2205.86743 70285.5 1.1634 0.00085661 -0.23443 -0.00017261 0.92898 0.00068401 736.630691735098 742.303840191749 77.352 2.4826 77.352 75.711 78.193 -7.6294E-06 1657 232 9 0 0 0 9.4229E-08 1 48721 62.082 54.46 3 1.1169 0.86293 0 162260000 75417000 86842000 5311 962 2742 3039 8674 8674 266 1690;1691;1700 SKGESDDFHMDFDSAVAPR 19 1 1 Oxidation (M) _SKGESDDFHM(ox)DFDSAVAPR_ SKGESDDFHM(1)DFDSAVAPR SKGESDDFHM(115.76)DFDSAVAPR 0 1 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 715.984 3 709.640976 2125.9011 72375.26 0.96113 0.00068206 -0.36058 -0.00025588 0.60055 0.00042618 709.975108305963 715.648352018476 112.27 1.5124 112.27 111.94 113.45 7.6294E-06 698 140 10 0 0 0 3.1852E-28 4 66457 115.76 106.35 1 0.91229 1.0887 0 95294000 53941000 41353000 5312 962 2742 3040 8675;8676;8677;8678 8676 266 SKGESDDFHMDFDSAVAPR 19 1 1 Oxidation (M) _SKGESDDFHM(ox)DFDSAVAPR_ SKGESDDFHM(1)DFDSAVAPR SKGESDDFHM(61.65)DFDSAVAPR 0 1 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 532.4827 4 532.482551 2125.9011 81983.7 0.69869 0.00037204 -0.35772 -0.00019048 0.34097 0.00018156 532.48243986595 536.988017615658 112.28 1.244 112.28 111.95 113.19 0 547 116 6 0 0 0 1.2097E-07 2 66485 61.648 40.911 1 0.95324 1.1323 0 66569000 32460000 34109000 5313 962 2742 3040 8679;8680 8679 266 SKGESDDFHMDFDSAVAPR 19 1 1 Oxidation (M) _SKGESDDFHM(ox)DFDSAVAPR_ SKGESDDFHM(1)DFDSAVAPR SKGESDDFHM(65.02)DFDSAVAPR 0 1 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 715.9841 3 709.640976 2125.9011 72375.28 0.85842 0.00060917 -0.012732 -9.0349E-06 0.84569 0.00060014 709.975197182476 715.983053040684 113.45 1.1323 113.45 113.02 114.15 7.6294E-06 273 102 4 0 0 0 1.1858E-07 2 67202 65.022 54.858 1 0.86092 0.99608 0 27510000 12540000 14970000 5314 962 2742 3040 8681;8682 8681 266 SKGESDDFHMDFDSAVAPR 19 1 1 Oxidation (M) _SKGESDDFHM(ox)DFDSAVAPR_ SKGESDDFHM(1)DFDSAVAPR SKGESDDFHM(72.42)DFDSAVAPR 0 1 0 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 715.6498 3 709.640976 2125.9011 NaN NaN NaN NaN NaN NaN NaN NaN NaN 114 1 114 113.5 114.5 0 0 0 0 1.2312E-07 1 67820 72.421 63.927 1 5315 962 2742 3040 8683 8683 266 SKGESDDFHMDFDSAVAPR 19 1 1 Oxidation (M),2 Phospho (STY) _S(ph)KGES(ph)DDFHM(ox)DFDSAVAPR_ SKGESDDFHM(1)DFDSAVAPR S(1)KGES(1)DDFHMDFDSAVAPR SKGESDDFHM(62.24)DFDSAVAPR S(47.31)KGES(38.67)DDFHMDFDS(-38.67)AVAPR 0 1 2 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 769.2944 3 762.951862 2285.83376 NaN NaN NaN -0.020123 -1.5353E-05 NaN NaN NaN NaN 88.864 1.1411 88.864 88.143 89.284 0 0 0 0 2.7044E-09 1 48324 62.237 54.148 3 NaN NaN 0 56400000 0 56400000 5316 962 2742 3041 8684 8684 266 1690;1691;1700 SKGESDDFHMDFDSAVAPR 19 1 1 Oxidation (M),2 Phospho (STY) _SKGES(ph)DDFHM(ox)DFDS(ph)AVAPR_ SKGESDDFHM(1)DFDSAVAPR S(0.363)KGES(0.638)DDFHMDFDS(0.999)AVAPR SKGESDDFHM(60.8)DFDSAVAPR S(-2.46)KGES(2.46)DDFHMDFDS(30.77)AVAPR 0 1 2 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 768.9599 3 762.951862 2285.83376 NaN NaN NaN 0.28781 0.00021958 NaN NaN NaN NaN 89.372 0.83995 89.372 89.151 89.991 0 0 0 0 3.411E-09 1 48968 60.797 46.782 3 NaN NaN 0 50437000 0 50437000 5317 962 2742 3041 8685 8685 266 1690;1691;1700 SKGESDDFHMDFDSAVAPR 19 1 1 Oxidation (M),2 Phospho (STY) _SKGES(ph)DDFHM(ox)DFDS(ph)AVAPR_ SKGESDDFHM(1)DFDSAVAPR S(0.015)KGES(0.985)DDFHMDFDS(1)AVAPR SKGESDDFHM(76.31)DFDSAVAPR S(-18.14)KGES(18.14)DDFHMDFDS(57.77)AVAPR 0 1 2 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 762.9519 3 762.951862 2285.83376 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.595 1 89.595 89.095 90.095 0 0 0 0 1.1404E-10 1 49133 76.31 65.767 3 5318 962 2742 3041 8686 8686 266 1690;1691;1700 SKPNLPSESR 10 1 1 Unmodified _SKPNLPSESR_ 0 0 0 1 A8K644;Q08170;Q59EF5 A8K644 A8K644 SFRS4;SRSF4 Serine/arginine-rich splicing factor 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 557.7965 2 557.796195 1113.57784 82728.87 0.61647 0.00034386 -0.42211 -0.00023545 0.19436 0.00010841 557.795794686215 566.80739631418 65.282 0.31213 65.282 65.108 65.421 -7.6294E-06 72 22 5 0 0 0 0.025977 1 31369 52.549 43.636 1 0.82079 0.95528 0 31100000 16129000 14970000 5319 478 2743 3042 8687 8687 SKSPPKSPEEEGAVSS 16 2 0 2 Phospho (STY) _S(ph)KS(ph)PPKSPEEEGAVSS_ S(1)KS(1)PPKSPEEEGAVSS S(49.01)KS(34.55)PPKS(-34.55)PEEEGAVS(-63.66)S(-63.73) 0 0 2 2 Q8NAK9;B3KUY1;A0A024R8U5;Q01130;B3KVY2;Q53FN0 Q8NAK9 Q8NAK9 SFRS2;SRSF2 Serine/arginine-rich splicing factor 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 896.3754 2 888.360454 1774.70636 64132.84 0.81888 0.00072746 0.14948 0.00013279 0.96836 0.00086025 888.360813561677 896.374898744335 41.639 1.4367 41.639 41 42.437 0 829 119 10 0 0 0 1.5347E-05 2 14710 67.685 67.685 10 1.4753 1.8542 0 51258000 20386000 30872000 5320 156 2744 3043 8688;8689 8688 237;238 SKSPPKSPEEEGAVSS 16 2 0 Phospho (STY) _SKS(ph)PPKSPEEEGAVSS_ S(0.153)KS(0.846)PPKS(0.001)PEEEGAVSS S(-7.42)KS(7.42)PPKS(-27.95)PEEEGAVS(-76.54)S(-87.82) 0 0 1 2 Q8NAK9;B3KUY1;A0A024R8U5;Q01130;B3KVY2;Q53FN0 Q8NAK9 Q8NAK9 SFRS2;SRSF2 Serine/arginine-rich splicing factor 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 848.3781 2 848.377289 1694.74003 65927.07 0.28379 0.00024076 0.64855 0.00055021 0.93234 0.00079098 848.378060844613 856.391946085579 23.203 1.5017 23.203 22.757 24.259 0 470 85 13 0 0 0 4.8183E-12 1 9576 93.427 87.455 5 0.82476 0.60182 0 640950000 350750000 290200000 5321 156 2744 3044 8690 8690 237;238 SKSPPKSPEEEGAVSS 16 2 0 Phospho (STY) _SKS(ph)PPKSPEEEGAVSS_ S(0.178)KS(0.791)PPKS(0.031)PEEEGAVSS S(-6.48)KS(6.48)PPKS(-14.07)PEEEGAVS(-45.26)S(-53.99) 0 0 1 2 Q8NAK9;B3KUY1;A0A024R8U5;Q01130;B3KVY2;Q53FN0 Q8NAK9 Q8NAK9 SFRS2;SRSF2 Serine/arginine-rich splicing factor 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 566.2553 3 565.920618 1694.74003 79855.75 -0.12659 -7.1642E-05 0.83506 0.00047258 0.70847 0.00040094 565.921263858436 571.263899610079 23.194 1.2491 23.194 22.716 23.966 0 382 69 12 0 0 0 3.8075E-05 1 9611 56.708 47.172 5 0.81301 0.59629 0 437270000 236340000 200940000 5322 156 2744 3044 8691 8691 237;238 SKVEDPEINSIQDIK 15 2 0 Unmodified _SKVEDPEINSIQDIK_ 0 0 0 1 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 577.9785 3 572.300108 1713.87849 NaN NaN NaN NaN NaN NaN NaN NaN NaN 101.27 1 101.27 100.77 101.77 0 0 0 0 0.034765 1 58199 27.496 9.9903 1 5323 1061 2745 3045 8692 8692 SLADILDPSVKIK 13 2 0 Phospho (STY) _SLADILDPS(ph)VKIK_ SLADILDPS(1)VKIK S(-57.62)LADILDPS(57.62)VKIK 0 0 1 1 C9IZC6;B3KU73;F5H3B6;B7Z682;Q13796 C9IZC6 C9IZC6 SHROOM2 Protein Shroom2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 739.8962 2 739.896932 1477.77931 71280.31 0.86625 0.00064094 -0.049403 -3.6553E-05 0.81685 0.00060438 739.896262468345 747.91132688625 109.2 1.0444 109.2 108.76 109.8 0 424 79 7 0 0 0 0.0012774 3 63988 70.412 52.814 2 1.0837 1.3834 0 89311000 43093000 46219000 5324 600 2746 3046 8693;8694;8695 8694 987 SLADILDPSVKIK 13 2 0 Phospho (STY) _SLADILDPS(ph)VKIK_ SLADILDPS(1)VKIK S(-63.67)LADILDPS(63.67)VKIK 0 0 1 1 C9IZC6;B3KU73;F5H3B6;B7Z682;Q13796 C9IZC6 C9IZC6 SHROOM2 Protein Shroom2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 747.9118 2 739.896932 1477.77931 70087.14 0.8654 0.00064031 0.075106 5.5571E-05 0.94051 0.00069588 739.896934565738 747.911286574374 110.65 1.1148 110.65 110.14 111.25 -7.6294E-06 660 97 10 0 0 0 1.3541E-14 3 65154 116.06 99.288 2 1.0727 1.4416 0 555170000 277520000 277640000 5325 600 2746 3046 8696;8697;8698 8697 987 SLADILDPSVKIK 13 2 0 Phospho (STY) _SLADILDPS(ph)VKIK_ SLADILDPS(1)VKIK S(-47.67)LADILDPS(47.67)VKIK 0 0 1 1 C9IZC6;B3KU73;F5H3B6;B7Z682;Q13796 C9IZC6 C9IZC6 SHROOM2 Protein Shroom2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 747.9124 2 739.896932 1477.77931 70809.88 1.2135 0.00089788 0.00071427 5.2848E-07 1.2142 0.00089841 739.89673093143 747.911219279238 110.41 1.3137 110.41 109.89 111.21 7.6294E-06 741 121 8 0 0 0 0.0041399 2 71288 52.576 49.043 2 1.3343 0.99788 0 101940000 42418000 59520000 5326 600 2746 3046 8699;8700 8700 987 SLADILDPSVKIK 13 2 0 Phospho (STY) _SLADILDPS(ph)VKIK_ SLADILDPS(1)VKIK S(-65.41)LADILDPS(65.41)VKIK 0 0 1 1 C9IZC6;B3KU73;F5H3B6;B7Z682;Q13796 C9IZC6 C9IZC6 SHROOM2 Protein Shroom2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 739.8981 2 739.896932 1477.77931 70054.23 1.1883 0.00087923 0.35891 0.00026556 1.5472 0.0011448 739.897477520722 747.911850323736 115.53 1.7702 115.53 114.96 116.73 0 1046 157 11 0 0 0 0.00052699 3 74181 74.46 49.023 2 1.3513 0.98723 0 586940000 250010000 336930000 5327 600 2746 3046 8701;8702;8703 8701 987 SLAFDSEHSADEK 13 1 0 2 Phospho (STY) _SLAFDS(ph)EHS(ph)ADEK_ SLAFDS(1)EHS(1)ADEK S(-74.61)LAFDS(74.61)EHS(86.67)ADEK 0 0 2 0 B2RWP5;Q96L73;Q96MN8;A4QPE5 B2RWP5 B2RWP5 NSD1 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 798.2877 2 798.286758 1594.55896 68477.57 1.0382 0.00082875 -0.15617 -0.00012467 0.88199 0.00070408 798.286616059006 802.293553166095 60.843 1.458 60.843 60.073 61.531 -3.8147E-06 616 106 8 0 0 0 4.4823E-10 3 27517 104.94 93.301 3 0.6283 0.78158 0 80594000 51303000 29291000 5328 565 2747 3047 8704;8705;8706 8704 940;941 SLAFDSEHSADEK 13 1 0 2 Phospho (STY) _SLAFDS(ph)EHS(ph)ADEK_ SLAFDS(1)EHS(1)ADEK S(-39.6)LAFDS(39.6)EHS(44.63)ADEK 0 0 2 0 B2RWP5;Q96L73;Q96MN8;A4QPE5 B2RWP5 B2RWP5 NSD1 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 802.2946 2 798.286758 1594.55896 68597.85 1.2401 0.00098995 -0.1953 -0.0001559 1.0448 0.00083404 798.286634363857 802.293699916886 53.176 1.5245 53.176 52.492 54.017 0 812 126 9 0 0 0 0.0038793 1 32299 53.946 44.121 3 1.716 1.1415 0 91750000 32848000 58902000 5329 565 2747 3047 8707 8707 940;941 SLAFDSEHSADEK 13 1 0 Phospho (STY) _SLAFDSEHS(ph)ADEK_ SLAFDS(0.01)EHS(0.99)ADEK S(-96.45)LAFDS(-20.06)EHS(20.06)ADEK 0 0 1 0 B2RWP5;Q96L73;Q96MN8;A4QPE5 B2RWP5 B2RWP5 NSD1 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 758.3035 2 758.303593 1514.59263 68627.39 1.0394 0.00078821 0.083233 6.3116E-05 1.1227 0.00085133 758.302784067713 762.311271633896 40.375 1.2219 40.375 39.99 41.212 0 604 112 8 0 0 0 3.4614E-15 1 23289 119 96.421 3 1.8029 1.2028 0 110110000 37246000 72865000 5330 565 2747 3048 8708 8708 940;941 SLANDFSTNSTK 12 1 0 Phospho (STY) _S(ph)LANDFSTNSTK_ S(0.999)LANDFSTNSTK S(34.2)LANDFS(-34.2)T(-37.43)NS(-37.43)T(-37.43)K 0 0 1 0 Q03188 Q03188 Q03188 CENPC Centromere protein C MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 682.7908 2 682.790121 1363.56569 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.471 1 65.471 64.971 65.971 0 0 0 0 0.01366 1 31538 41.577 16.256 5 5331 1035 2748 3049 8709 8709 1924 SLAPSIHGHDYVK 13 1 0 Unmodified _SLAPSIHGHDYVK_ 0 0 0 0 Q8NHX6;B4DS46;B4DUQ9;Q53HJ4;B2R7C5;A0A0S2Z4T1;J3KQ69;A0A0S2Z492;P25205 Q8NHX6 Q8NHX6 HCC5;MCM3 DNA helicase;DNA replication licensing factor MCM3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 475.2496 3 475.249131 1422.72556 93030.61 0.29057 0.0001381 0.17137 8.1442E-05 0.46194 0.00021954 475.24935604412 477.920358635787 109.43 0.31725 109.43 109.25 109.57 0 77 23 6 0 0 0 0.0022048 2 64332 53.377 37.621 1 0.56195 0.6928 0 23034000 15830000 7203400 5332 351 2749 3050 8710;8711 8711 SLATMDSPPHQK 12 1 0 Oxidation (M),Phospho (STY) _SLATM(ox)DS(ph)PPHQK_ SLATM(1)DSPPHQK SLAT(0.009)MDS(0.991)PPHQK SLATM(64.65)DSPPHQK S(-50.88)LAT(-20.45)MDS(20.45)PPHQK 0 1 1 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 704.3011 2 704.302342 1406.59013 73710.33 0.95123 0.00066995 -0.37563 -0.00026456 0.57559 0.00040539 704.302095212464 708.309322062022 45.527 0.79528 45.527 45.17 45.965 3.8147E-06 233 56 5 0 0 0 0.0051513 1 17060 64.65 47.42 3 0.71151 0.84302 0 5398600 2836000 2562600 5333 1059 2750 3051 8712 8712 303 1980 SLDLDGIIAEVK 12 1 0 Phospho (STY) _S(ph)LDLDGIIAEVK_ S(1)LDLDGIIAEVK S(225.33)LDLDGIIAEVK 0 0 1 0 B3KY79;CON__P08729;CON__Q3KNV1;P08729;Q3B834;Q3KNV1 B3KY79 B3KY79 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 676.8398 2 676.839083 1351.66361 73620.66 1.0877 0.00073619 -0.061252 -4.1458E-05 1.0264 0.00069474 676.839030355106 680.846141457676 133.55 0.21266 133.55 133.43 133.64 0 36 7 8 0 0 0 1.1919E-148 2 81357 225.33 165.92 1 0.93715 1.1694 0 69374000 35165000 34209000 + 5334 613 2751 3052 8713;8714 8713 1015 SLDLDSIIAEVK 12 1 0 Unmodified _SLDLDSIIAEVK_ 0 0 0 0 H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;CON__P04264 H6VRG3 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 651.8618 2 651.8612 1301.70785 NaN NaN NaN 0.21547 0.00014046 NaN NaN NaN NaN 131.6 0.73334 131.6 131.09 131.82 0 0 0 0 0.0020017 1 79751 76.143 37.85 1 NaN NaN 0 4232800 4232800 0 + 5335 876 2752 3053 8715 8715 SLDLDSIIAEVK 12 1 0 Unmodified _SLDLDSIIAEVK_ 0 0 0 0 H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;CON__P04264 H6VRG3 H6VRG3 KRT1 Keratin, type II cytoskeletal 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 651.8608 2 651.8612 1301.70785 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.91 1 131.91 131.41 132.41 0 0 0 0 4.4337E-05 1 80243 79.693 41.4 1 + 5336 876 2752 3053 8716 8716 SLDMDSIIAEVK 12 1 0 Oxidation (M),Phospho (STY) _SLDM(ox)DS(ph)IIAEVK_ SLDM(1)DSIIAEVK SLDMDS(1)IIAEVK SLDM(135.58)DSIIAEVK S(-84.57)LDMDS(84.57)IIAEVK 0 1 1 0 CON__P05787;P05787;Q969I0;Q7L4M3;F8VUG2;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 708.8214 2 708.820033 1415.62551 71065.66 1.3766 0.00097573 0.59262 0.00042006 1.9692 0.0013958 708.820357170454 712.827456097195 102.95 0.98888 102.95 102.2 103.19 7.6294E-06 375 61 7 0 0 0 5.0062E-20 2 59165 135.58 100.77 2 1.4863 1.8438 0 115150000 46760000 68394000 + 5337 754 2753 3054 8717;8718 8718 203 1276;1277 SLDMDSIIAEVK 12 1 0 Oxidation (M),Phospho (STY) _SLDM(ox)DS(ph)IIAEVK_ SLDM(1)DSIIAEVK SLDMDS(1)IIAEVK SLDM(168.76)DSIIAEVK S(-105.29)LDMDS(105.29)IIAEVK 0 1 1 0 CON__P05787;P05787;Q969I0;Q7L4M3;F8VUG2;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 708.8207 2 708.820033 1415.62551 70751.87 1.0161 0.00072023 -0.037976 -2.6918E-05 0.97812 0.00069331 708.81998643067 712.827137401478 103.67 1.3013 103.67 103.14 104.45 0 401 96 8 0 0 0 7.6392E-53 2 59723 168.76 138.43 2 1.5583 1.9341 0 107020000 41655000 65362000 + 5338 754 2753 3054 8719;8720 8720 203 1276;1277 SLDMDSIIAEVK 12 1 0 Oxidation (M),Phospho (STY) _S(ph)LDM(ox)DSIIAEVK_ SLDM(1)DSIIAEVK S(1)LDMDSIIAEVK SLDM(225.97)DSIIAEVK S(105.44)LDMDS(-105.44)IIAEVK 0 1 1 0 CON__P05787;P05787;Q969I0;Q7L4M3;F8VUG2;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 712.8278 2 708.820033 1415.62551 71556.64 0.99689 0.00070662 -0.29261 -0.00020741 0.70428 0.00049921 708.819802660659 712.826943536659 108.02 1.4437 108.02 107.24 108.68 0 465 110 6 0 0 0 9.5245E-149 2 62890 225.97 171.5 2 1.267 1.5752 0 86191000 41177000 45014000 + 5339 754 2753 3054 8721;8722 8722 203 1276;1277 SLDMDSIIAEVK 12 1 0 Oxidation (M),Phospho (STY) _SLDM(ox)DS(ph)IIAEVK_ SLDM(1)DSIIAEVK SLDMDS(1)IIAEVK SLDM(134.21)DSIIAEVK S(-80.95)LDMDS(80.95)IIAEVK 0 1 1 0 CON__P05787;P05787;Q969I0;Q7L4M3;F8VUG2;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 712.8273 2 708.820033 1415.62551 NaN NaN NaN -0.024873 -1.7631E-05 NaN NaN NaN NaN 103.83 0.72697 103.83 103.76 104.49 0 0 0 0 6.3955E-44 1 60216 134.21 104.27 2 NaN NaN 0 82179000 0 82179000 + 5340 754 2753 3054 8723 8723 203 1276;1277 SLDMDSIIAEVK 12 1 0 Oxidation (M),Phospho (STY) _SLDM(ox)DS(ph)IIAEVK_ SLDM(1)DSIIAEVK SLDMDS(1)IIAEVK SLDM(82.2)DSIIAEVK S(-59.11)LDMDS(59.11)IIAEVK 0 1 1 0 CON__P05787;P05787;Q969I0;Q7L4M3;F8VUG2;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 712.8282 2 708.820033 1415.62551 71564.04 1.2024 0.00085225 -0.20072 -0.00014227 1.0016 0.00070998 708.820066402387 712.827143054222 109.17 0.907 109.17 108.68 109.59 7.6294E-06 530 90 8 0 0 0 0.00047279 1 70341 82.202 63.577 2 1.2199 0.79548 0 43304000 19411000 23893000 + 5341 754 2753 3054 8724 8724 203 1276;1277 SLDMDSIIAEVK 12 1 0 Oxidation (M),Phospho (STY) _SLDM(ox)DS(ph)IIAEVK_ SLDM(1)DSIIAEVK SLDMDS(1)IIAEVK SLDM(73.39)DSIIAEVK S(-42.77)LDMDS(42.77)IIAEVK 0 1 1 0 CON__P05787;P05787;Q969I0;Q7L4M3;F8VUG2;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 708.821 2 708.820033 1415.62551 71951.42 1.196 0.00084777 -0.37012 -0.00026235 0.82591 0.00058542 708.819919582098 712.826885078632 109.93 0.98415 109.93 109.5 110.49 0 588 92 8 0 0 0 0.0015605 2 70466 73.386 55.95 2 1.2593 0.82157 0 44168000 20194000 23974000 + 5342 754 2753 3054 8725;8726 8725 203 1276;1277 SLDMDSIIAEVK 12 1 0 Oxidation (M),Phospho (STY) _S(ph)LDM(ox)DSIIAEVK_ SLDM(1)DSIIAEVK S(0.999)LDMDS(0.001)IIAEVK SLDM(82.07)DSIIAEVK S(31.86)LDMDS(-31.86)IIAEVK 0 1 1 0 CON__P05787;P05787;Q969I0;Q7L4M3;F8VUG2;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 712.8273 2 708.820033 1415.62551 NaN NaN NaN NaN NaN NaN NaN NaN NaN 114.61 1 114.61 114.11 115.11 7.6294E-06 0 0 0 2.7378E-05 1 73798 82.069 49.011 2 + 5343 754 2753 3054 8727 8727 203 1276;1277 SLDMDSIIAEVK 12 1 0 Oxidation (M),2 Phospho (STY) _S(ph)LDM(ox)DS(ph)IIAEVK_ SLDM(1)DSIIAEVK S(1)LDMDS(1)IIAEVK SLDM(105.14)DSIIAEVK S(105.14)LDMDS(105.14)IIAEVK 0 1 2 0 CON__P05787;P05787;Q969I0;Q7L4M3;F8VUG2;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 752.8094 2 748.803198 1495.59184 70623.95 0.74774 0.00055991 -0.5956 -0.00044599 0.15214 0.00011392 748.803175515033 752.80907268785 111.37 0.59911 111.37 111.03 111.63 0 238 52 6 0 0 0 1.0604E-09 2 65903 105.14 82.37 1 1.3004 1.6489 0 35217000 14540000 20677000 + 5344 754 2753 3055 8728;8729 8728 203 1276;1277 SLDMDSIIAEVK 12 1 0 Oxidation (M),2 Phospho (STY) _S(ph)LDM(ox)DS(ph)IIAEVK_ SLDM(1)DSIIAEVK S(1)LDMDS(1)IIAEVK SLDM(75.67)DSIIAEVK S(75.67)LDMDS(75.67)IIAEVK 0 1 2 0 CON__P05787;P05787;Q969I0;Q7L4M3;F8VUG2;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 753.3129 2 748.803198 1495.59184 70623.99 0.76458 0.00057252 -0.016057 -1.2024E-05 0.74852 0.0005605 748.803566780618 752.809682937141 111.85 0.65709 111.85 111.55 112.21 0 254 56 6 0 0 0 0.00086457 2 66285 75.669 57.151 1 1.3399 1.6995 0 36701000 15620000 21081000 + 5345 754 2753 3055 8730;8731 8730 203 1276;1277 SLDMDSIIAEVK 12 1 0 Phospho (STY) _S(ph)LDMDSIIAEVK_ S(1)LDMDSIIAEVK S(33.18)LDMDS(-33.18)IIAEVK 0 0 1 0 CON__P05787;P05787;Q969I0;Q7L4M3;F8VUG2;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 701.3257 2 700.822576 1399.6306 75336.09 1.0507 0.00073635 -0.12354 -8.6578E-05 0.92715 0.00064977 700.822430148879 704.829290764316 129.22 0.42023 129.22 129.06 129.48 0 78 34 4 0 0 0 0.0073321 2 78513 59.227 50.646 2 0.66887 0.79151 0 4122100 2182100 1940000 + 5346 754 2753 3056 8732;8733 8732 1276;1277 SLDMDSIIAEVK 12 1 0 Phospho (STY) _SLDMDS(ph)IIAEVK_ SLDMDS(1)IIAEVK S(-49.47)LDMDS(49.47)IIAEVK 0 0 1 0 CON__P05787;P05787;Q969I0;Q7L4M3;F8VUG2;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 700.8225 2 700.822576 1399.6306 NaN NaN NaN -0.33045 -0.00023159 NaN NaN NaN NaN 127.89 0.33595 127.89 127.75 128.09 -7.6294E-06 0 0 0 0.0022555 1 77683 62.042 34.713 2 NaN NaN 0 2300100 2300100 0 + 5347 754 2753 3056 8734 8734 1276;1277 SLDMDSIIAEVK 12 1 0 Phospho (STY) _SLDMDS(ph)IIAEVK_ SLDMDS(1)IIAEVK S(-62.08)LDMDS(62.08)IIAEVK 0 0 1 0 CON__P05787;P05787;Q969I0;Q7L4M3;F8VUG2;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 704.8299 2 700.822576 1399.6306 NaN NaN NaN NaN NaN NaN NaN NaN NaN 127.91 1 127.91 127.41 128.41 7.6294E-06 0 0 0 3.0738E-05 1 77642 72.089 33.796 2 + 5348 754 2753 3056 8735 8735 1276;1277 SLDMDSIIAEVK 12 1 0 Phospho (STY) _SLDMDS(ph)IIAEVK_ SLDMDS(1)IIAEVK S(-39.05)LDMDS(39.05)IIAEVK 0 0 1 0 CON__P05787;P05787;Q969I0;Q7L4M3;F8VUG2;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 704.8303 2 700.822576 1399.6306 NaN NaN NaN NaN NaN NaN NaN NaN NaN 128.02 1 128.02 127.52 128.52 0 0 0 0 0.0032878 1 77723 49.423 26.683 2 + 5349 754 2753 3056 8736 8736 1276;1277 SLDMDSIIAEVK 12 1 0 Phospho (STY) _SLDMDS(ph)IIAEVK_ S(0.178)LDMDS(0.822)IIAEVK S(-6.65)LDMDS(6.65)IIAEVK 0 0 1 0 CON__P05787;P05787;Q969I0;Q7L4M3;F8VUG2;CON__H-INV:HIT000292931 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 700.8232 2 700.822576 1399.6306 NaN NaN NaN NaN NaN NaN NaN NaN NaN 134.8 1 134.8 134.3 135.3 0 0 0 0 2.7678E-05 1 87068 81.185 49.026 2 + 5350 754 2753 3056 8737 8737 1276;1277 SLDPGLFDDSDSQCSPTR 18 0 1 Unmodified _SLDPGLFDDSDSQCSPTR_ 0 0 0 0 B4DEV2;A0A024QZA5;A0A1B0GWK2;Q674X7 B4DEV2 B4DEV2 hCG_1821267;KAZN Kazrin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 669.6242 3 666.289943 1995.848 75237.79 0.57413 0.00038254 -3.5779 -0.0023839 -3.0038 -0.0020014 666.287481978935 669.958061860738 73.486 0.43613 73.486 73.211 73.647 0 107 36 5 0 0 0 0.014715 1 37481 14.472 2.6845 1 1.0613 1.3045 0 29512000 17118000 12393000 5351 10 2754 3057 8738 8738 SLDPLGSEEEAEASEDDSLHLLGGGGR 27 0 1 Phospho (STY) _S(ph)LDPLGSEEEAEASEDDSLHLLGGGGR_ S(0.891)LDPLGS(0.1)EEEAEAS(0.004)EDDS(0.004)LHLLGGGGR S(9.51)LDPLGS(-9.51)EEEAEAS(-23.01)EDDS(-23.01)LHLLGGGGR 0 0 1 0 A0A0B4J2E5;Q15269 A0A0B4J2E5 A0A0B4J2E5 PWP2 Periodic tryptophan protein 2 homolog ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 944.4175 3 940.745095 2819.21346 NaN NaN NaN 0.043779 4.1185E-05 NaN NaN NaN NaN 120.26 0.51408 120.26 120.12 120.63 0 0 0 0 9.7977E-05 1 72496 40.142 31.635 4 NaN NaN 0 18185000 0 18185000 5352 313 2755 3058 8739 8739 493;494;495 SLDSEPSVPSAAKPPSPEK 19 2 0 Phospho (STY) _SLDSEPSVPSAAKPPS(ph)PEK_ SLDSEPSVPS(0.006)AAKPPS(0.994)PEK S(-85.02)LDS(-68.07)EPS(-47.24)VPS(-21.86)AAKPPS(21.86)PEK 0 0 1 1 Q7Z3K3 Q7Z3K3 Q7Z3K3 POGZ Pogo transposable element with ZNF domain MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1002.4745 2 1001.97209 2001.92962 61799.66 0.46934 0.00047026 0.35774 0.00035845 0.82708 0.00082871 1002.47378815732 1009.98671331142 75.37 1.1263 75.37 74.877 76.003 0 553 97 7 0 0 0 1.5103E-18 2 38692 100.41 83.666 5 0.65837 0.83876 0 83150000 44912000 38238000 5353 1134 2756 3059 8740;8741 8741 2167;2168 SLDSEPSVPSAAKPPSPEK 19 2 0 Phospho (STY) _SLDSEPSVPSAAKPPS(ph)PEK_ SLDSEPS(0.002)VPS(0.065)AAKPPS(0.933)PEK S(-75.41)LDS(-42.31)EPS(-27.35)VPS(-11.55)AAKPPS(11.55)PEK 0 0 1 1 Q7Z3K3 Q7Z3K3 Q7Z3K3 POGZ Pogo transposable element with ZNF domain MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 673.6607 3 668.317149 2001.92962 74282.88 0.84434 0.00056428 -0.13141 -8.7826E-05 0.71292 0.00047646 668.651296108481 673.659753860818 75.359 1.3083 75.359 74.755 76.064 0 695 115 9 0 0 0 1.2091E-14 2 38496 90.534 78.746 5 0.65867 0.85445 0 158010000 92634000 65377000 5354 1134 2756 3059 8742;8743 8742 2167;2168 SLDSEPSVPSAAKPPSPEK 19 2 0 Phospho (STY) _SLDSEPSVPSAAKPPS(ph)PEK_ SLDS(0.002)EPS(0.011)VPS(0.199)AAKPPS(0.787)PEK S(-43.38)LDS(-24.99)EPS(-18.37)VPS(-5.96)AAKPPS(5.96)PEK 0 0 1 1 Q7Z3K3 Q7Z3K3 Q7Z3K3 POGZ Pogo transposable element with ZNF domain MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 668.6527 3 668.317149 2001.92962 74394.55 0.99936 0.00066789 0.07772 5.1942E-05 1.0771 0.00071983 668.317530391995 673.659876595031 71.872 1.3435 71.872 71.249 72.593 0 1010 124 12 0 0 0 7.3009E-05 1 45212 43.523 43.523 5 1.1933 0.88023 0 286100000 133540000 152570000 5355 1134 2756 3059 8744 8744 2167;2168 SLDSEPSVPSAAKPPSPEK 19 2 0 Phospho (STY) _SLDSEPSVPSAAKPPS(ph)PEK_ SLDSEPS(0.018)VPS(0.011)AAKPPS(0.97)PEK S(-45.07)LDS(-36.76)EPS(-17.27)VPS(-19.4)AAKPPS(17.27)PEK 0 0 1 1 Q7Z3K3 Q7Z3K3 Q7Z3K3 POGZ Pogo transposable element with ZNF domain MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1001.9728 2 1001.97209 2001.92962 60711.88 0.30146 0.00030205 0.92838 0.00093021 1.2298 0.0012323 1001.97291506909 1009.98712276421 71.913 1.2564 71.913 71.287 72.543 0 636 116 9 0 0 0 3.9355E-07 1 45562 60.093 44.891 5 1.2549 0.92973 0 206270000 79633000 126640000 5356 1134 2756 3059 8745 8745 2167;2168 SLDSEPSVPSAAKPPSPEK 19 2 0 2 Phospho (STY) _SLDS(ph)EPSVPSAAKPPS(ph)PEK_ S(0.395)LDS(0.599)EPS(0.006)VPS(0.071)AAKPPS(0.929)PEK S(-1.82)LDS(1.82)EPS(-20.58)VPS(-11.26)AAKPPS(11.26)PEK 0 0 2 1 Q7Z3K3 Q7Z3K3 Q7Z3K3 POGZ Pogo transposable element with ZNF domain ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1042.457 2 1041.95525 2081.89595 NaN NaN NaN 0.14255 0.00014853 NaN NaN NaN NaN 78.387 0.11893 78.387 78.306 78.424 0 0 0 0 2.2187E-05 1 41092 51.348 36.425 10 NaN NaN 0 7048000 7048000 0 5357 1134 2756 3060 8746 8746 2167;2168 SLEDALAEAQR 11 0 1 Unmodified _SLEDALAEAQR_ 0 0 0 0 B7ZLZ7;A0A024R158;O95347;Q05BV1;A8K984;Q2KQ72;B3KMB1;Q7Z2X1;Q6IPS5 B7ZLZ7 B7ZLZ7 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 601.8033 2 601.804217 1201.59388 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.197 1 89.197 88.697 89.697 7.6294E-06 0 0 0 0.00031772 1 48823 76.465 37.317 1 5358 39 2757 3061 8747 8747 SLEPPVLELSPGAK 14 1 0 Phospho (STY) _SLEPPVLELS(ph)PGAK_ SLEPPVLELS(1)PGAK S(-63.97)LEPPVLELS(63.97)PGAK 0 0 1 0 P29375 P29375 P29375 KDM5A Lysine-specific demethylase 5A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 758.886 2 758.886564 1515.75858 69920.18 0.96224 0.00073023 -0.047858 -3.6319E-05 0.91438 0.00069391 758.886356757413 762.893490715232 117.04 0.62904 117.04 116.75 117.37 0 303 57 7 0 0 0 0.00014788 1 69894 75.764 57.452 2 0.88141 1.1176 0 41694000 23365000 18329000 5359 980 2758 3062 8748 8748 1735 SLESCLLDLR 10 0 1 Phospho (STY) _S(ph)LESCLLDLR_ S(1)LESCLLDLR S(56.19)LES(-56.19)CLLDLR 0 0 1 0 J3KPS2;Q6ZRV2 J3KPS2 J3KPS2 FAM83H Protein FAM83H MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 643.2972 2 643.296528 1284.5785 76264.4 0.86272 0.00055499 -0.41534 -0.00026719 0.44738 0.0002878 643.296221005223 648.300482661464 122.05 0.77023 122.05 121.71 122.48 0 230 56 6 0 0 0 3.7817E-10 2 73607 129.82 99.427 2 0.67628 0.81096 0 17515000 9531000 7983800 5360 890 2759 3063 8749;8750 8749 1515 SLESLDTSLFAK 12 1 0 Phospho (STY) _SLES(ph)LDTSLFAK_ SLES(0.998)LDT(0.001)SLFAK S(-43.95)LES(29.14)LDT(-29.14)S(-35.81)LFAK 0 0 1 0 B4DW90;Q53HM6;B3KY12;A8K7V1;A8K566;Q12874 B4DW90 B4DW90 SF3A3 Splicing factor 3A subunit 3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 699.8363 2 695.828715 1389.64288 NaN NaN NaN NaN NaN NaN NaN NaN NaN 124.82 1 124.82 124.32 125.32 0 0 0 0 2.5182E-05 1 75672 79.492 50.193 4 5361 473 2760 3064 8751 8751 824 SLESLDTSLFAK 12 1 0 Phospho (STY) _SLES(ph)LDTSLFAK_ SLES(0.996)LDT(0.003)S(0.001)LFAK S(-40.48)LES(25.36)LDT(-25.36)S(-29.62)LFAK 0 0 1 0 B4DW90;Q53HM6;B3KY12;A8K7V1;A8K566;Q12874 B4DW90 B4DW90 SF3A3 Splicing factor 3A subunit 3 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 695.8292 2 695.828715 1389.64288 NaN NaN NaN NaN NaN NaN NaN NaN NaN 124.89 1 124.89 124.39 125.39 7.6294E-06 0 0 0 0.0013495 1 75713 85.845 41.229 4 5362 473 2760 3064 8752 8752 824 SLETENAGLR 10 0 1 Unmodified _SLETENAGLR_ 0 0 0 0 P02545;W8QEH3;Q5I6Y5;Q3BDU5;Q8N519;W5X314 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 550.2857 2 545.280377 1088.5462 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.349 1 63.349 62.849 63.849 3.8147E-06 0 0 0 0.00040697 1 29812 79.906 37.797 1 5363 954 2761 3065 8753 8753 SLFGQLHPPDEGHGD 15 0 0 Unmodified _SLFGQLHPPDEGHGD_ 0 0 0 0 Q9NY61;A0A087WTH8 Q9NY61 Q9NY61 AATF Protein AATF ISO-MSMS -1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 535.9153 3 535.914588 1604.72193 NaN NaN NaN -0.050085 -2.6841E-05 NaN NaN NaN NaN 109.99 1.0038 109.99 109.25 110.25 0 0 0 0 0.020106 1 64392 36.445 22.416 1 5364 1223 2762 3066 8754 8754 SLFGQLHPPDEGHGD 15 0 0 Unmodified _SLFGQLHPPDEGHGD_ 0 0 0 0 Q9NY61;A0A087WTH8 Q9NY61 Q9NY61 AATF Protein AATF MSMS -1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 535.9149 3 535.914588 1604.72193 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.24 1 110.24 109.74 110.74 -7.6294E-06 0 0 0 0.013953 1 65028 35.657 5.5983 1 5365 1223 2762 3066 8755 8755 SLFVGHMDYK 10 1 0 Oxidation (M) _SLFVGHM(ox)DYK_ SLFVGHM(1)DYK SLFVGHM(55.57)DYK 0 1 0 0 Q53GS0;D2CFK9;Q9BZE4;Q8N4P8;B4DHR2;O60747 Q53GS0 Q53GS0 GTPBP4 Nucleolar GTP-binding protein 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 606.7906 2 606.789524 1211.56449 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.142 1 94.142 93.642 94.642 0 0 0 0 0.0060002 1 52639 55.567 33.481 1 5366 762 2763 3067 8756 8756 206 SLGLDINMDSR 11 0 1 Oxidation (M),Phospho (STY) _S(ph)LGLDINM(ox)DSR_ SLGLDINM(1)DSR S(1)LGLDINMDSR SLGLDINM(98.9)DSR S(84.9)LGLDINMDS(-84.9)R 0 1 1 0 Q96H22 Q96H22 Q96H22 CENPN Centromere protein N MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 663.7867 2 658.781242 1315.54793 75493.48 1.3778 0.00090765 0.1279 8.426E-05 1.5057 0.00099191 658.781615047831 663.785247950097 90.607 1.4337 90.607 89.832 91.265 0 446 126 5 0 0 0 3.9179E-06 2 50002 98.902 77.672 2 0.71736 0.90563 0 92803000 47444000 45359000 5367 1176 2764 3068 8757;8758 8758 328 2311;2312 SLGLDINMDSR 11 0 1 Oxidation (M),Phospho (STY) _SLGLDINM(ox)DS(ph)R_ SLGLDINM(1)DSR SLGLDINMDS(1)R SLGLDINM(49.42)DSR S(-49.42)LGLDINMDS(49.42)R 0 1 1 0 Q96H22 Q96H22 Q96H22 CENPN Centromere protein N MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 658.7812 2 658.781242 1315.54793 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.175 1 89.175 88.675 89.675 -7.6294E-06 0 0 0 0.0054298 1 48806 49.423 19.488 2 5368 1176 2764 3068 8759 8759 328 2311;2312 SLGLDINMDSR 11 0 1 Oxidation (M),Phospho (STY) _S(ph)LGLDINM(ox)DSR_ SLGLDINM(1)DSR S(1)LGLDINMDSR SLGLDINM(50.56)DSR S(39.07)LGLDINMDS(-39.07)R 0 1 1 0 Q96H22 Q96H22 Q96H22 CENPN Centromere protein N MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 663.7852 2 658.781242 1315.54793 75231.02 0.96073 0.00063291 -0.21287 -0.00014023 0.74786 0.00049268 658.781171268956 663.785162285521 94.634 0.90225 94.634 94.16 95.063 0 402 82 7 0 0 0 0.0099018 2 60739 50.562 36.883 2 0.80669 0.55977 0 40322000 23002000 17320000 5369 1176 2764 3068 8760;8761 8760 328 2311;2312 SLGLDINMDSR 11 0 1 Oxidation (M),2 Phospho (STY) _S(ph)LGLDINM(ox)DS(ph)R_ SLGLDINM(1)DSR S(1)LGLDINMDS(1)R SLGLDINM(99.45)DSR S(99.45)LGLDINMDS(99.45)R 0 1 2 0 Q96H22 Q96H22 Q96H22 CENPN Centromere protein N MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 698.7641 2 698.764407 1395.51426 73895.77 0.92618 0.00064718 -0.50972 -0.00035618 0.41645 0.000291 698.764196188421 703.768250682187 98.324 0.81662 98.324 97.905 98.722 7.6294E-06 191 66 4 0 0 0 1.9113E-06 2 55797 99.451 78.412 1 1.2252 1.4924 0 20992000 8961400 12031000 5370 1176 2764 3069 8762;8763 8762 328 2311;2312 SLGLGPGER 9 0 1 Phospho (STY) _S(ph)LGLGPGER_ S(1)LGLGPGER S(76.14)LGLGPGER 0 0 1 0 B3KPM8;Q8N5C6;B7ZAA7;B7Z6X7 B3KPM8 B3KPM8 SRBD1 S1 RNA-binding domain-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 483.2257 2 483.226232 964.437911 86117.75 0.32353 0.00015634 0.80032 0.00038673 1.1238 0.00054307 483.226129166852 488.230296478059 67.657 1.1786 67.657 66.937 68.116 0 367 99 6 0 0 0 0.00095313 2 33101 76.143 26.792 1 0.84922 1.071 0 65189000 36781000 28408000 5371 590 2765 3070 8764;8765 8764 973 SLGLGPGER 9 0 1 Phospho (STY) _S(ph)LGLGPGER_ S(1)LGLGPGER S(81.02)LGLGPGER 0 0 1 0 B3KPM8;Q8N5C6;B7ZAA7;B7Z6X7 B3KPM8 B3KPM8 SRBD1 S1 RNA-binding domain-containing protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 488.2303 2 483.226232 964.437911 86146.04 0.58448 0.00028243 -0.21732 -0.00010501 0.36716 0.00017742 483.226030411527 488.230199758806 61.245 1.6585 61.245 60.459 62.117 0 714 152 6 0 0 0 0.00045523 3 38047 81.017 31.716 1 1.8244 1.2342 0 72683000 25747000 46936000 5372 590 2765 3070 8766;8767;8768 8767 973 SLGNILQAKPTSSPAK 16 2 0 Phospho (STY) _SLGNILQAKPT(ph)SSPAK_ SLGNILQAKPT(0.333)S(0.333)S(0.333)PAK S(-65.58)LGNILQAKPT(0)S(0)S(0)PAK 0 0 1 1 J3KQ96;E7ETY2;Q13428;B4DRA2;Q59FZ2;B4DLB1 J3KQ96 J3KQ96 TCOF1 Treacle protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 564.9631 3 564.62911 1690.8655 80169.11 1.1386 0.00064286 -0.1292 -7.2949E-05 1.0094 0.00056991 564.628983670024 569.97187472321 91.499 1.1271 91.499 91.067 92.194 0 382 95 9 0 0 0 2.3638E-05 2 50826 67.449 57.168 4 0.86968 1.1447 0 265030000 141060000 123970000 5373 792 2766 3071 8769;8770 8770 1353;1354;2822 SLGNILQAKPTSSPAK 16 2 0 Phospho (STY) _SLGNILQAKPT(ph)SSPAK_ SLGNILQAKPT(0.333)S(0.333)S(0.333)PAK S(-82.64)LGNILQAKPT(0)S(0)S(0)PAK 0 0 1 1 J3KQ96;E7ETY2;Q13428;B4DRA2;Q59FZ2;B4DLB1 J3KQ96 J3KQ96 TCOF1 Treacle protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 854.4548 2 846.440027 1690.8655 66336.31 0.50526 0.00042767 -0.13289 -0.00011248 0.37238 0.00031519 846.4399625715 854.45428851334 91.758 0.53403 91.758 91.636 92.17 0 196 45 7 0 0 0 3.5754E-09 2 50982 88.243 88.243 4 0.84722 1.0902 0 118770000 62132000 56636000 5374 792 2766 3071 8771;8772 8772 1353;1354;2822 SLGNILQAKPTSSPAK 16 2 0 Phospho (STY) _SLGNILQAKPT(ph)SSPAK_ SLGNILQAKPT(0.333)S(0.333)S(0.333)PAK S(-66.14)LGNILQAKPT(0)S(0)S(0)PAK 0 0 1 1 J3KQ96;E7ETY2;Q13428;B4DRA2;Q59FZ2;B4DLB1 J3KQ96 J3KQ96 TCOF1 Treacle protein ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 854.4565 2 846.440027 1690.8655 NaN NaN NaN 0.26593 0.00022509 NaN NaN NaN NaN 91.426 0.3548 91.426 91.11 91.465 7.6294E-06 0 0 0 7.5957E-06 1 50358 71.98 57.189 4 NaN NaN 0 70245000 0 70245000 5375 792 2766 3071 8773 8773 1353;1354;2822 SLGNILQAKPTSSPAK 16 2 0 Phospho (STY) _SLGNILQAKPT(ph)SSPAK_ SLGNILQAKPT(0.333)S(0.333)S(0.333)PAK S(-40.87)LGNILQAKPT(0)S(0)S(0)PAK 0 0 1 1 J3KQ96;E7ETY2;Q13428;B4DRA2;Q59FZ2;B4DLB1 J3KQ96 J3KQ96 TCOF1 Treacle protein ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 569.9717 3 564.62911 1690.8655 NaN NaN NaN -0.34541 -0.00019503 NaN NaN NaN NaN 91.758 0.65288 91.758 91.636 92.289 0 0 0 0 0.00095625 1 50990 46.408 27.576 4 NaN NaN 0 77763000 0 77763000 5376 792 2766 3071 8774 8774 1353;1354;2822 SLGNILQAKPTSSPAK 16 2 0 Phospho (STY) _SLGNILQAKPT(ph)SSPAK_ SLGNILQAKPT(0.39)S(0.39)S(0.219)PAK S(-127.32)LGNILQAKPT(0)S(0)S(-2.5)PAK 0 0 1 1 J3KQ96;E7ETY2;Q13428;B4DRA2;Q59FZ2;B4DLB1 J3KQ96 J3KQ96 TCOF1 Treacle protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 569.9722 3 564.62911 1690.8655 79765.34 0.56696 0.00032012 0.066554 3.7578E-05 0.63351 0.0003577 564.629028464055 569.971948428278 83.147 1.7671 83.147 82.491 84.258 0 698 163 7 0 0 0 5.0599E-37 2 53431 133.24 133.24 4 2.1835 1.6362 0 88309000 20415000 67894000 5377 792 2766 3071 8775;8776 8775 1353;1354;2822 SLGNILQAKPTSSPAK 16 2 0 Phospho (STY) _SLGNILQAKPT(ph)SSPAK_ SLGNILQAKPT(0.333)S(0.333)S(0.333)PAK S(-77.17)LGNILQAKPT(0)S(0)S(0)PAK 0 0 1 1 J3KQ96;E7ETY2;Q13428;B4DRA2;Q59FZ2;B4DLB1 J3KQ96 J3KQ96 TCOF1 Treacle protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 854.9564 2 846.440027 1690.8655 65572.79 0.98517 0.00083388 -0.10989 -9.3013E-05 0.87528 0.00074087 846.439941668819 854.454223962602 83.173 1.8669 83.173 82.504 84.371 0 585 172 6 0 0 0 2.783E-07 2 53447 81.651 81.651 4 2.2034 1.6971 0 44052000 12332000 31720000 5378 792 2766 3071 8777;8778 8777 1353;1354;2822 SLGNILQAKPTSSPAK 16 2 0 Phospho (STY) _SLGNILQAKPT(ph)SSPAK_ SLGNILQAKPT(0.333)S(0.333)S(0.333)PAK S(-42.6)LGNILQAKPT(0)S(0)S(0)PAK 0 0 1 1 J3KQ96;E7ETY2;Q13428;B4DRA2;Q59FZ2;B4DLB1 J3KQ96 J3KQ96 TCOF1 Treacle protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 564.9634 3 564.62911 1690.8655 79971.98 0.5162 0.00029146 0.13107 7.4005E-05 0.64726 0.00036546 564.963419813398 569.971989098494 84.603 1.4174 84.603 83.773 85.19 0 555 129 9 0 0 0 0.00030505 1 53984 43.12 32.839 4 1.9967 1.5096 0 54024000 19410000 34614000 5379 792 2766 3071 8779 8779 1353;1354;2822 SLGNILQAKPTSSPAK 16 2 0 Phospho (STY) _SLGNILQAKPT(ph)SSPAK_ SLGNILQAKPT(0.333)S(0.333)S(0.333)PAK S(-52.92)LGNILQAKPT(0)S(0)S(0)PAK 0 0 1 1 J3KQ96;E7ETY2;Q13428;B4DRA2;Q59FZ2;B4DLB1 J3KQ96 J3KQ96 TCOF1 Treacle protein ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 846.4415 2 846.440027 1690.8655 NaN NaN NaN 0.19807 0.00016766 NaN NaN NaN NaN 83.8 0.80948 83.8 83.46 84.269 0 0 0 0 0.00017115 1 54007 56.339 37.55 4 NaN NaN 0 14946000 14946000 0 5380 792 2766 3071 8780 8780 1353;1354;2822 SLGSVQAPSYGAR 13 0 1 Phospho (STY) _S(ph)LGSVQAPSYGAR_ S(0.894)LGS(0.106)VQAPSYGAR S(9.27)LGS(-9.27)VQAPS(-62.91)Y(-64.65)GAR 0 0 1 0 F8VZY9;B2RA03;A0A024RAY2;P05783 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 686.8168 2 686.816474 1371.61839 73499.25 0.97613 0.00067042 -0.25565 -0.00017558 0.72048 0.00049484 686.816307494303 691.820757058523 74.241 0.98994 74.241 73.836 74.826 0 412 85 7 0 0 0 0.0016342 1 47031 70.438 56.085 4 1.5373 1.0834 0 32117000 12369000 19748000 5381 186 2767 3072 8781 8781 297;298 SLGSVQAPSYGAR 13 0 1 Phospho (STY) _SLGS(ph)VQAPSYGAR_ S(0.021)LGS(0.979)VQAPSYGAR S(-16.71)LGS(16.71)VQAPS(-42.79)Y(-48.62)GAR 0 0 1 0 F8VZY9;B2RA03;A0A024RAY2;P05783 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 691.8214 2 686.816474 1371.61839 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.91 1 73.91 73.41 74.41 0 0 0 0 0.00065701 1 46927 53.516 39.163 4 5382 186 2767 3072 8782 8782 297;298 SLGTADVHFER 11 0 1 Unmodified _SLGTADVHFER_ 0 0 0 0 E9PB61;Q86V81 E9PB61 E9PB61 ALYREF THO complex subunit 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 414.5433 3 411.207043 1230.5993 95969.16 0.58518 0.00024063 0.62473 0.0002569 1.2099 0.00049753 411.20735492455 414.54308438345 91.534 0.37869 91.534 91.312 91.691 0 104 30 6 0 0 0 0.024695 1 50487 27.409 18.511 1 1.2058 1.4834 0 24602000 13020000 11582000 5383 797 2768 3073 8783 8783 SLGTADVHFER 11 0 1 Unmodified _SLGTADVHFER_ 0 0 0 0 E9PB61;Q86V81 E9PB61 E9PB61 ALYREF THO complex subunit 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 616.3075 2 616.306926 1230.5993 81065.43 1.0497 0.00064694 -0.0020454 -1.2606E-06 1.0477 0.00064568 616.306870474409 621.310936969055 91.569 0.28219 91.569 91.383 91.665 0 48 22 4 0 0 0 2.2923E-13 2 50612 132.01 100.08 1 0.29041 0.35087 0 19186000 14113000 5073100 5384 797 2768 3073 8784;8785 8785 SLGVLPFTLNSGSPEK 16 1 0 Phospho (STY) _SLGVLPFTLNS(ph)GSPEK_ SLGVLPFT(0.052)LNS(0.783)GS(0.165)PEK S(-82.48)LGVLPFT(-11.81)LNS(6.77)GS(-6.77)PEK 0 0 1 0 P42695;Q96FA6 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 867.4344 2 863.426585 1724.83862 65606.55 0.76167 0.00065765 0.19137 0.00016524 0.95304 0.00082288 863.426751376513 867.433817589798 130.86 0.9196 130.86 130.45 131.37 0 585 83 10 0 0 0 1.3917E-09 1 79473 89.232 69.775 4 0.93705 1.1608 0 146570000 74475000 72092000 5385 991 2769 3074 8786 8786 1761;1762;1763;2887 SLGVLPFTLNSGSPEK 16 1 0 Phospho (STY) _SLGVLPFT(ph)LNSGSPEK_ SLGVLPFT(0.547)LNS(0.226)GS(0.226)PEK S(-49.85)LGVLPFT(3.84)LNS(-3.84)GS(-3.84)PEK 0 0 1 0 P42695;Q96FA6 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 863.4278 2 863.426585 1724.83862 63981.05 1.0129 0.00087461 0.12624 0.000109 1.1392 0.0009836 863.426913870718 867.434174047833 134.79 0.19504 134.79 134.71 134.9 0 26 4 9 0 0 0 0.0018327 1 87106 50.155 40.202 4 1.9533 1.3054 0 123060000 41818000 81237000 5386 991 2769 3074 8787 8787 1761;1762;1763;2887 SLGVLPFTLNSGSPEK 16 1 0 2 Phospho (STY) _SLGVLPFTLNS(ph)GS(ph)PEK_ SLGVLPFT(0.425)LNS(0.708)GS(0.867)PEK S(-56.62)LGVLPFT(-2.93)LNS(2.93)GS(6.37)PEK 0 0 2 0 P42695;Q96FA6 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 903.4106 2 903.40975 1804.80495 NaN NaN NaN NaN NaN NaN NaN NaN NaN 133.66 1 133.66 133.16 134.16 1.5259E-05 0 0 0 1.6933E-06 1 81470 70.26 57.304 6 5387 991 2769 3075 8788 8788 1761;1762;1763;2887 SLGVLPFTLNSGSPEK 16 1 0 2 Phospho (STY) _SLGVLPFT(ph)LNS(ph)GSPEK_ S(0.001)LGVLPFT(0.668)LNS(0.706)GS(0.625)PEK S(-29.51)LGVLPFT(0.53)LNS(1.06)GS(-0.53)PEK 0 0 2 0 P42695;Q96FA6 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 907.4175 2 903.40975 1804.80495 NaN NaN NaN NaN NaN NaN NaN NaN NaN 133.67 1 133.67 133.17 134.17 0 0 0 0 0.0014738 1 81471 45.864 25.081 6 5388 991 2769 3075 8789 8789 1761;1762;1763;2887 SLHLSPQEQSASYQDR 16 0 1 Phospho (STY) _SLHLS(ph)PQEQSASYQDR_ S(0.288)LHLS(0.712)PQEQSASYQDR S(-3.93)LHLS(3.93)PQEQS(-58.36)AS(-66.11)Y(-69.84)QDR 0 0 1 0 A8K3X3;Q9H410;Q5JW53;Q4G1A1 A8K3X3 A8K3X3 DSN1 Kinetochore-associated protein DSN1 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 642.9532 3 642.617821 1924.83163 75372.52 0.65013 0.00041778 -0.97465 -0.00062633 -0.32452 -0.00020854 642.617705322041 645.953559165733 73.651 1.3636 73.651 72.95 74.314 0 416 117 6 0 0 0 2.9837E-08 2 37391 81.89 71.256 5 0.66157 0.83547 0 111140000 67159000 43979000 5389 455 2770 3076 8790;8791 8791 791;792 SLHLSPQEQSASYQDR 16 0 1 Phospho (STY) _SLHLS(ph)PQEQSASYQDR_ S(0.008)LHLS(0.992)PQEQSASYQDR S(-20.94)LHLS(20.94)PQEQS(-38.43)AS(-43.45)Y(-50.08)QDR 0 0 1 0 A8K3X3;Q9H410;Q5JW53;Q4G1A1 A8K3X3 A8K3X3 DSN1 Kinetochore-associated protein DSN1 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 968.4303 2 963.423094 1924.83163 61765.95 0.24671 0.00023768 -0.56758 -0.00054682 -0.32087 -0.00030913 963.923186366822 968.928219342912 73.652 0.87891 73.652 73.264 74.143 0 261 73 6 0 0 0 2.7178E-06 1 37388 74.772 60.21 5 0.68535 0.86238 0 47627000 25898000 21728000 5390 455 2770 3076 8792 8792 791;792 SLHLSPQEQSASYQDR 16 0 1 Phospho (STY) _S(ph)LHLSPQEQSASYQDR_ S(0.584)LHLS(0.416)PQEQSASYQDR S(1.47)LHLS(-1.47)PQEQS(-53.22)AS(-59.09)Y(-64.15)QDR 0 0 1 0 A8K3X3;Q9H410;Q5JW53;Q4G1A1 A8K3X3 A8K3X3 DSN1 Kinetochore-associated protein DSN1 homolog MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 642.9504 3 642.617821 1924.83163 75692.14 1.0519 0.00067596 -1.4422 -0.00092676 -0.39028 -0.0002508 642.617848569347 645.953539445018 63.662 1.9521 63.662 62.76 64.712 -3.8147E-06 825 175 11 0 0 0 3.2224E-05 1 39338 65.887 65.887 5 0.87552 0.58649 0 118480000 38728000 79750000 5391 455 2770 3076 8793 8793 791;792 SLHLSPQEQSASYQDR 16 0 1 Phospho (STY) _SLHLS(ph)PQEQSASYQDR_ S(0.001)LHLS(0.864)PQEQS(0.102)AS(0.03)Y(0.004)QDR S(-30.94)LHLS(9.26)PQEQS(-9.26)AS(-14.64)Y(-23.75)QDR 0 0 1 0 A8K3X3;Q9H410;Q5JW53;Q4G1A1 A8K3X3 A8K3X3 DSN1 Kinetochore-associated protein DSN1 homolog MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 963.4251 2 963.423094 1924.83163 59675.66 0.68225 0.0006573 -0.77537 -0.00074701 -0.093119 -8.9713E-05 963.423216456072 968.426785488043 63.783 1.5826 63.783 62.896 64.479 0 643 141 8 0 0 0 0.0011528 1 39899 41.412 35.441 5 0.92085 0.62404 0 66672000 35162000 31510000 5392 455 2770 3076 8794 8794 791;792 SLHSVSEER 9 0 1 Unmodified _SLHSVSEER_ 0 0 0 0 Q8WYP5;B3KRD0;H7C4S1 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 348.5083 3 348.508722 1042.50434 105879 -0.36645 -0.00012771 0.014463 5.0404E-06 -0.35198 -0.00012267 348.508674243697 351.844751846032 66.502 0.34811 66.502 66.309 66.657 0 63 23 5 0 0 0 0.0052716 1 32409 53.089 40.052 1 1.3551 1.6646 0 23036000 9875700 13161000 5393 1170 2771 3077 8795 8795 SLKESEQESEEEILAQK 17 2 0 2 Phospho (STY) _SLKES(ph)EQES(ph)EEEILAQK_ S(0.002)LKES(0.998)EQES(1)EEEILAQK S(-26.41)LKES(26.41)EQES(97.86)EEEILAQK 0 0 2 1 B2R6A9;Q9BW71 B2R6A9 B2R6A9 HIRIP3 HIRA-interacting protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1068.9531 2 1068.9529 2135.89126 58959.04 0.38507 0.00041162 0.37795 0.00040401 0.76302 0.00081563 1069.4544869864 1076.96803963211 76.17 1.1337 76.17 75.681 76.814 0 623 99 9 0 0 0 2.2961E-74 2 39634 175.32 150.16 3 0.57755 0.74795 0 148840000 92367000 56474000 5394 532 2772 3078 8796;8797 8797 892;893 SLLDGLASSPR 11 0 1 Acetyl (Protein N-term),Phospho (STY) _(ac)SLLDGLAS(ph)SPR_ SLLDGLAS(0.5)S(0.5)PR S(-33.03)LLDGLAS(0)S(0)PR 1 0 1 0 E9PI10;E9PK87;Q96LV8;F8W6N5;Q3YBR2 E9PI10 E9PI10 TBRG1 Transforming growth factor beta regulator 1 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 623.9587 2 619.294843 1236.57513 78761.55 0.9143 0.00056622 -0.27703 -0.00017157 0.63727 0.00039466 619.29439694652 624.29928395438 127.63 0.27109 127.63 127.43 127.7 0 57 26 4 0 0 0 0.02546 1 77457 48.568 25.342 3 0.51047 0.55652 0 4786500 3336000 1450500 5395 801 2773 3079 8798 8798 1381;1382 SLLEGEGSSGGGGR 14 0 1 Unmodified _SLLEGEGSSGGGGR_ 0 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 631.8023 2 631.802205 1261.58986 NaN NaN NaN -0.17696 -0.0001118 NaN NaN NaN NaN 32.384 0.4211 32.384 32.189 32.61 0 0 0 0 0.0010954 1 17404 55.452 26.365 1 NaN NaN 0 5394300 5394300 0 + 5396 755 2774 3080 8799 8799 SLLEGEGSSGGGGR 14 0 1 Phospho (STY) _SLLEGEGS(ph)SGGGGR_ SLLEGEGS(0.5)S(0.5)GGGGR S(-50.39)LLEGEGS(0)S(0)GGGGR 0 0 1 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 671.7856 2 671.78537 1341.55619 NaN NaN NaN 0.40417 0.00027151 NaN NaN NaN NaN 46.871 0.66791 46.871 46.541 47.208 0 0 0 0 0.0015622 1 27898 51.643 6.5659 3 NaN NaN 0 4817600 4817600 0 + 5397 755 2774 3081 8800 8800 1278;1279 SLLGIDTEDAIQGR 14 0 1 Phospho (STY) _S(ph)LLGIDTEDAIQGR_ S(1)LLGIDTEDAIQGR S(94.85)LLGIDT(-94.85)EDAIQGR 0 0 1 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 784.3727 2 784.37181 1566.72907 68069.6 0.86653 0.00067968 -0.050942 -3.9958E-05 0.81559 0.00063972 784.371727369591 789.375860351519 113.83 0.79794 113.83 113.47 114.27 0 402 69 8 0 0 0 2.7605E-27 2 67518 131.53 106 2 0.87338 1.1022 0 74754000 40963000 33791000 5398 999 2775 3082 8801;8802 8802 1814 SLLGIDTEDAIQGR 14 0 1 Phospho (STY) _S(ph)LLGIDTEDAIQGR_ S(1)LLGIDTEDAIQGR S(41.44)LLGIDT(-41.44)EDAIQGR 0 0 1 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 784.3732 2 784.37181 1566.72907 68660.55 1.1759 0.00092231 0.25936 0.00020343 1.4352 0.0011257 784.371930797462 789.376192342706 121.6 0.7756 121.6 121.25 122.03 -7.6294E-06 428 72 8 0 0 0 0.0021672 2 78516 64.675 42.477 2 1.3802 0.97377 0 31730000 13112000 18618000 5399 999 2775 3082 8803;8804 8804 1814 SLLPVKPVEIEIETPEQAK 19 2 0 Phospho (STY) _SLLPVKPVEIEIET(ph)PEQAK_ SLLPVKPVEIEIET(1)PEQAK S(-98.9)LLPVKPVEIEIET(98.9)PEQAK 0 0 1 1 X5DRB1;A8K146;A0A024R2M8;Q01831;D9I4E1;D2CPK1;E7EUB5;D2CPI9;D2CPJ0 X5DRB1 X5DRB1 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 734.0564 3 734.055265 2199.14397 70898.28 0.9604 0.00070499 -0.16695 -0.00012255 0.79345 0.00058244 734.055164442254 739.397947797223 123.12 1.4078 123.12 122.28 123.68 7.6294E-06 748 117 9 0 0 0 9.6988E-29 3 74521 114.15 105.55 2 0.45255 0.58711 0 158520000 109940000 48571000 5400 66 2776 3083 8805;8806;8807 8806 2624 SLLPVKPVEIEIETPEQAK 19 2 0 Phospho (STY) _SLLPVKPVEIEIET(ph)PEQAK_ SLLPVKPVEIEIET(1)PEQAK S(-59.09)LLPVKPVEIEIET(59.09)PEQAK 0 0 1 1 X5DRB1;A8K146;A0A024R2M8;Q01831;D9I4E1;D2CPK1;E7EUB5;D2CPI9;D2CPJ0 X5DRB1 X5DRB1 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 739.7335 3 734.055265 2199.14397 70339.66 1.0404 0.00076373 0.097752 7.1755E-05 1.1382 0.00083549 734.389665934073 739.398131490293 125.79 0.87778 125.79 125.4 126.28 0 627 79 12 0 0 0 9.2204E-08 1 81103 62.193 62.193 2 0.85394 0.63073 0 258820000 143200000 115620000 5401 66 2776 3083 8808 8808 2624 SLNNQFASFIDK 12 1 0 Unmodified _SLNNQFASFIDK_ 0 0 0 0 H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;CON__P04264;CON__ENSEMBL:ENSBTAP00000038253;H6VRG2 H6VRG3;H6VRG2 H6VRG2 KRT1 Keratin, type II cytoskeletal 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 692.3491 2 692.348791 1382.68303 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.5 1 112.5 112 113 7.6294E-06 0 0 0 0.0024199 1 66758 85.958 48.614 1 + 5402 876;877 2777 3084 8809 8809 SLNNQFASFIDK 12 1 0 Unmodified _SLNNQFASFIDK_ 0 0 0 0 H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;CON__P04264;CON__ENSEMBL:ENSBTAP00000038253;H6VRG2 H6VRG3;H6VRG2 H6VRG2 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 692.85 2 692.348791 1382.68303 NaN NaN NaN -1.8109 -0.0012538 NaN NaN NaN NaN 111.96 0.94373 111.96 111.22 112.16 0 0 0 0 0.023963 2 72067 42.001 22.972 1 NaN NaN 0 4188400 4188400 0 + 5403 876;877 2777 3084 8810;8811 8811 SLPEEDVAEIQHAEEFLIKPESK 23 2 0 Phospho (STY) _S(ph)LPEEDVAEIQHAEEFLIKPESK_ S(1)LPEEDVAEIQHAEEFLIKPESK S(145.86)LPEEDVAEIQHAEEFLIKPES(-145.86)K 0 0 1 1 O60832;U5U7S7;H7C2Q9;H7C0M1;C9IYT0;U5UA77 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 907.1038 3 906.768512 2717.28371 62739.45 1.0165 0.00092176 -0.47335 -0.00042922 0.54318 0.00049254 907.103229174548 912.444508502139 133.42 0.40181 133.42 133.24 133.64 0 168 19 16 0 0 0 1.9173E-77 3 81163 155.8 154.1 2 0.49089 0.70178 0 4998900000 3381200000 1617700000 5404 931 2778 3085 8812;8813;8814 8813 1586 SLPEEDVAEIQHAEEFLIKPESK 23 2 0 Phospho (STY) _S(ph)LPEEDVAEIQHAEEFLIKPESK_ S(1)LPEEDVAEIQHAEEFLIKPESK S(124.68)LPEEDVAEIQHAEEFLIKPES(-124.68)K 0 0 1 1 O60832;U5U7S7;H7C2Q9;H7C0M1;C9IYT0;U5UA77 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 680.5794 4 680.328203 2717.28371 72204.13 0.86701 0.00058985 -0.086379 -5.8766E-05 0.78063 0.00053109 680.578777495607 684.586069117487 133.42 0.33002 133.42 133.27 133.6 1.5259E-05 80 16 11 0 0 0 5.6998E-56 1 81200 130.57 115.86 2 0.48017 0.62673 0 196540000 130950000 65594000 5405 931 2778 3085 8815 8815 1586 SLPEEDVAEIQHAEEFLIKPESK 23 2 0 Phospho (STY) _S(ph)LPEEDVAEIQHAEEFLIKPESK_ S(1)LPEEDVAEIQHAEEFLIKPESK S(39.58)LPEEDVAEIQHAEEFLIKPES(-39.58)K 0 0 1 1 O60832;U5U7S7;H7C2Q9;H7C0M1;C9IYT0;U5UA77 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 907.1024 3 906.768512 2717.28371 64540.9 0.6879 0.00062377 -0.75613 -0.00068564 -0.068227 -6.1867E-05 907.101987776296 912.445190286449 145.35 0.56052 145.35 145.26 145.82 0 65 18 9 0 0 0 1.4644E-05 1 83769 40.454 33.261 2 0.4891 0.60146 0 34132000 22043000 12089000 5406 931 2778 3085 8816 8816 1586 SLPEWLSDR 9 0 1 Phospho (STY) _SLPEWLS(ph)DR_ SLPEWLS(1)DR S(-38.36)LPEWLS(38.36)DR 0 0 1 0 Q9BSC4 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 591.7632 2 591.763178 1181.5118 NaN NaN NaN NaN NaN NaN NaN NaN NaN 106.76 1 106.76 106.26 107.26 0 0 0 0 0.022131 1 62195 40.715 14.672 2 5407 1193 2779 3086 8817 8817 2363 SLPNILTDDR 10 0 1 Phospho (STY) _S(ph)LPNILTDDR_ S(1)LPNILTDDR S(42.09)LPNILT(-42.09)DDR 0 0 1 0 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 612.2881 2 612.287018 1222.55948 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.91 1 109.91 109.41 110.41 -7.6294E-06 0 0 0 0.0097399 1 64773 47.288 31.749 2 5408 1193 2780 3087 8818 8818 2364 SLPNILTDDR 10 0 1 Phospho (STY) _S(ph)LPNILTDDR_ S(1)LPNILTDDR S(33.98)LPNILT(-33.98)DDR 0 0 1 0 Q9BSC4;B4DS83 Q9BSC4 Q9BSC4 NOL10 Nucleolar protein 10 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 617.2909 2 612.287018 1222.55948 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.92 1 109.92 109.42 110.42 0 0 0 0 0.015429 1 64782 42.843 20.695 2 5409 1193 2780 3087 8819 8819 2364 SLPRPHDFFDAQTLDAIR 18 0 2 Phospho (STY) _S(ph)LPRPHDFFDAQTLDAIR_ S(1)LPRPHDFFDAQTLDAIR S(54.55)LPRPHDFFDAQT(-54.55)LDAIR 0 0 1 1 G5EA50;B3KXA1;Q6ZN18 G5EA50 G5EA50 AEBP2 Zinc finger protein AEBP2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 727.3512 3 727.015916 2178.02592 76090.34 1.071 0.00077862 -0.2005 -0.00014576 0.87049 0.00063286 727.349635060048 734.022949979012 133.4 0.26633 133.4 133.33 133.6 0 20 11 4 0 0 0 1.3979E-06 1 81225 64.954 55.907 2 0.39726 0.47098 0 11903000 7324200 4578600 5410 611 2781 3088 8820 8820 1009 SLPTPAVLLSPTK 13 1 0 Phospho (STY) _SLPTPAVLLS(ph)PTK_ SLPTPAVLLS(0.817)PT(0.183)K S(-57.52)LPT(-41.67)PAVLLS(6.51)PT(-6.51)K 0 0 1 0 B2RTX2;Q8WX93 B2RTX2 B2RTX2 PALLD Palladin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 706.3888 2 702.380918 1402.74728 75450.79 0.89512 0.00062872 0.33405 0.00023463 1.2292 0.00086335 702.381373894998 706.388125128084 120.91 0.52443 120.91 120.73 121.26 0 117 40 5 0 0 0 0.0045112 2 72864 61.409 48.273 4 1.0412 1.2352 0 10171000 3915700 6255600 5411 562 2782 3089 8821;8822 8821 928 SLPTTVPESPNYR 13 0 1 Phospho (STY) _SLPTTVPES(ph)PNYR_ SLPTT(0.026)VPES(0.961)PNY(0.013)R S(-45.01)LPT(-38.88)T(-15.71)VPES(15.71)PNY(-18.59)R 0 0 1 0 H0YC33;E5RH50;A0A0B4J210;Q6PKG0 H0YC33 H0YC33 LARP1 La-related protein 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 770.857 2 770.855796 1539.69704 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.081 1 82.081 81.581 82.581 7.6294E-06 0 0 0 0.00096349 1 43809 52.555 23.256 5 5412 310 2783 3090 8823 8823 492 SLQEEHVAVAQLR 13 0 1 Phospho (STY) _S(ph)LQEEHVAVAQLR_ S(1)LQEEHVAVAQLR S(42)LQEEHVAVAQLR 0 0 1 0 Q15149 Q15149 Q15149 PLEC Plectin MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 785.3871 2 780.382512 1558.75047 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.623 1 84.623 84.123 85.123 0 0 0 0 0.0094461 1 45582 41.996 21.615 1 5413 1070 2784 3091 8824 8824 2018 SLQSVAEER 9 0 1 Unmodified _SLQSVAEER_ 0 0 0 0 A0A024R2Q4;P61313;B4DLP4;E7EQV9;E7EX53 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 514.7663 2 509.76182 1017.50909 87091.29 0.65658 0.0003347 -0.070915 -3.615E-05 0.58566 0.00029855 509.761840844399 514.765897167586 31.997 0.36816 31.997 31.805 32.173 0 76 26 4 0 0 0 0.033601 1 17196 56.729 20.849 1 0.73569 0.61124 0 4617300 2603500 2013900 5414 68 2785 3092 8825 8825 SLSDNGQPGTPDPADSGGTSAK 22 1 0 Phospho (STY) _SLSDNGQPGT(ph)PDPADSGGTSAK_ SLSDNGQPGT(0.998)PDPADS(0.002)GGTSAK S(-58.26)LS(-46.85)DNGQPGT(27.91)PDPADS(-27.91)GGT(-36.89)S(-41.9)AK 0 0 1 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1074.4557 2 1069.94733 2137.8801 57979.04 0.41584 0.00044493 -0.14958 -0.00016004 0.26626 0.00028489 1070.44865975714 1073.95477290869 47.331 1.3656 47.331 46.701 48.066 0 574 94 8 0 0 0 8.9097E-18 2 18093 84.62 72.701 6 1.0677 1.3228 0 140370000 68305000 72065000 5415 938 2786 3093 8826;8827 8827 2855 SLSEIHSPNIQDSSFDSVR 19 0 1 2 Phospho (STY) _SLSEIHS(ph)PNIQDS(ph)SFDSVR_ S(0.015)LS(0.39)EIHS(0.595)PNIQDS(0.519)S(0.476)FDS(0.005)VR S(-16.16)LS(-1.85)EIHS(1.85)PNIQDS(0.38)S(-0.38)FDS(-20.46)VR 0 0 2 0 B7Z7S9;Q562F6 B7Z7S9 B7Z7S9 SGOL2 Shugoshin-like 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 759.9872 3 759.985672 2276.93519 70197.13 1.0701 0.00081324 -0.57754 -0.00043892 0.49253 0.00037432 760.319330980351 763.655862738696 97.701 0.85037 97.701 97.307 98.158 0 426 69 8 0 0 0 4.0783E-05 1 55119 48.867 43.5 15 0.88788 1.1206 0 78879000 38882000 39996000 5416 713 2787 3094 8828 8828 1184;1185;1186 SLSEIHSPNIQDSSFDSVR 19 0 1 2 Phospho (STY) _SLSEIHS(ph)PNIQDS(ph)SFDSVR_ S(0.087)LS(0.103)EIHS(0.81)PNIQDS(0.556)S(0.435)FDS(0.009)VR S(-9.86)LS(-9.12)EIHS(9.12)PNIQDS(1.14)S(-1.14)FDS(-17.63)VR 0 0 2 0 B7Z7S9;Q562F6 B7Z7S9 B7Z7S9 SGOL2 Shugoshin-like 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1144.4778 2 1139.47487 2276.93519 59351.2 0.48567 0.00055341 -0.60767 -0.00069242 -0.12199 -0.00013901 1139.97552879504 1144.4789095876 97.743 0.87861 97.743 97.355 98.234 0 332 72 8 0 0 0 1.9611E-13 1 55361 83.891 63.523 15 1.2089 1.5219 0 50724000 27204000 23520000 5417 713 2787 3094 8829 8829 1184;1185;1186 SLSEIHSPNIQDSSFDSVR 19 0 1 2 Phospho (STY) _SLSEIHS(ph)PNIQDS(ph)SFDSVR_ S(0.089)LS(0.1)EIHS(0.811)PNIQDS(0.582)S(0.394)FDS(0.023)VR S(-9.74)LS(-9.23)EIHS(9.23)PNIQDS(1.74)S(-1.74)FDS(-14.27)VR 0 0 2 0 B7Z7S9;Q562F6 B7Z7S9 B7Z7S9 SGOL2 Shugoshin-like 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1139.9778 2 1139.47487 2276.93519 56864.05 0.6038 0.00068802 -0.84836 -0.00096669 -0.24456 -0.00027867 1139.97615761164 1144.47793229258 104.21 1.79 104.21 103.7 105.49 0 605 170 9 0 0 0 2.0882E-07 1 67046 61.767 49 15 2.3715 1.6113 0 58598000 15563000 43035000 5418 713 2787 3094 8830 8830 1184;1185;1186 SLSEIHSPNIQDSSFDSVR 19 0 1 Phospho (STY) _SLSEIHS(ph)PNIQDSSFDSVR_ S(0.001)LS(0.228)EIHS(0.771)PNIQDSSFDSVR S(-29.99)LS(-5.29)EIHS(5.29)PNIQDS(-45.28)S(-49.23)FDS(-68.11)VR 0 0 1 0 B7Z7S9;Q562F6 B7Z7S9 B7Z7S9 SGOL2 Shugoshin-like 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 733.3328 3 733.330229 2196.96886 70424.67 1.0948 0.00080282 0.48243 0.00035378 1.5772 0.0011566 733.66493431297 736.666620192464 98.042 1.1714 98.042 97.415 98.586 0 695 97 10 0 0 0 1.4282E-13 3 55320 82.177 66.923 6 1.0628 1.3446 0 307010000 150560000 156440000 5419 713 2787 3095 8831;8832;8833 8832 1184;1185;1186 SLSEIHSPNIQDSSFDSVR 19 0 1 Phospho (STY) _SLS(ph)EIHSPNIQDSSFDSVR_ S(0.002)LS(0.568)EIHS(0.428)PNIQDSSFDSVR S(-23.85)LS(1.23)EIHS(-1.23)PNIQDS(-31.14)S(-33.94)FDS(-39.87)VR 0 0 1 0 B7Z7S9;Q562F6 B7Z7S9 B7Z7S9 SGOL2 Shugoshin-like 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 733.665 3 733.330229 2196.96886 70600.7 1.0681 0.0007833 -0.08005 -5.8703E-05 0.98809 0.0007246 733.664555226775 736.666292546547 98.229 1.7363 98.229 97.568 99.304 0 1091 161 11 0 0 0 1.0095E-05 3 63073 52.185 38.313 6 2.2547 1.5036 0 148290000 47330000 100960000 5420 713 2787 3095 8834;8835;8836 8834 1184;1185;1186 SLSEIHSPNIQDSSFDSVR 19 0 1 Phospho (STY) _SLSEIHS(ph)PNIQDSSFDSVR_ SLSEIHS(1)PNIQDSSFDSVR S(-37.47)LS(-38.35)EIHS(37.47)PNIQDS(-55.29)S(-55.29)FDS(-60.84)VR 0 0 1 0 B7Z7S9;Q562F6 B7Z7S9 B7Z7S9 SGOL2 Shugoshin-like 2 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1104.4971 2 1099.4917 2196.96886 NaN NaN NaN 0.10245 0.00011264 NaN NaN NaN NaN 98.147 1.4547 98.147 97.483 98.938 -7.6294E-06 0 0 0 1.4646E-12 1 63131 84.173 70.973 6 NaN NaN 0 41358000 0 41358000 5421 713 2787 3095 8837 8837 1184;1185;1186 SLSLEATSPLSAEK 14 1 0 Phospho (STY) _SLSLEATS(ph)PLSAEK_ SLSLEAT(0.053)S(0.894)PLS(0.053)AEK S(-71.89)LS(-56.03)LEAT(-12.29)S(12.29)PLS(-12.29)AEK 0 0 1 0 H3BN63;B4DR89;Q86YC2 H3BN63 H3BN63 PALB2 Partner and localizer of BRCA2 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 761.3744 2 756.863286 1511.71202 NaN NaN NaN -1.0109 -0.00076512 NaN NaN NaN NaN 101.92 0.32925 101.92 101.76 102.09 0 0 0 0 0.00010351 1 65566 78.505 49.032 5 NaN NaN 0 5293600 0 5293600 5422 653 2788 3096 8838 8838 1085 SLSMDSQVPVYSPSIDLK 18 1 0 Oxidation (M),Phospho (STY) _SLSM(ox)DSQVPVYS(ph)PSIDLK_ SLSM(1)DSQVPVYSPSIDLK S(0.001)LS(0.001)MDSQVPVY(0.174)S(0.706)PS(0.119)IDLK SLSM(50.08)DSQVPVYSPSIDLK S(-30.36)LS(-30.36)MDS(-35.38)QVPVY(-6.09)S(6.09)PS(-7.74)IDLK 0 1 1 0 B4DTN6;Q9ULJ3 B4DTN6 B4DTN6 ZBTB21 Zinc finger and BTB domain-containing protein 21 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1035.4844 2 1031.47615 2060.93774 61133.14 0.52131 0.00053772 0.285 0.00029397 0.80631 0.00083169 1031.47626964787 1035.48339156275 110.77 0.49063 110.77 110.56 111.05 0 145 40 5 0 0 0 7.0521E-05 2 65381 50.079 42.168 6 0.71719 0.87607 0 19003000 10553000 8450900 5423 661 2789 3097 8839;8840 8840 166 1104 SLSNSNPDISGTPTSPDDEVR 21 0 1 Phospho (STY) _SLSNSNPDIS(ph)GTPTSPDDEVR_ S(0.005)LS(0.005)NS(0.005)NPDIS(0.311)GT(0.051)PT(0.311)S(0.311)PDDEVR S(-17.86)LS(-17.86)NS(-17.86)NPDIS(0)GT(-7.83)PT(0)S(0)PDDEVR 0 0 1 0 A0A0U1RRC1;A0A0U1RQJ5;Q96N67 A0A0U1RRC1 A0A0U1RRC1 DOCK7 Dedicator of cytokinesis protein 7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1134.9905 2 1134.48682 2266.95908 58596.93 0.37482 0.00042523 -0.014902 -1.6906E-05 0.35992 0.00040832 1134.98830678175 1139.99224021159 75.975 0.56521 75.975 75.681 76.246 -7.6294E-06 196 50 6 0 0 0 2.5141E-05 1 39194 43.184 35.459 7 1.0811 1.3291 0 28567000 15039000 13529000 5424 366 2790 3098 8841 8841 573;574;2695 SLSPGGAALGYR 12 0 1 Phospho (STY) _SLS(ph)PGGAALGYR_ S(0.001)LS(0.999)PGGAALGYR S(-31.62)LS(31.62)PGGAALGY(-68.2)R 0 0 1 0 A0A087WWP4;Q96T37 A0A087WWP4 A0A087WWP4 RBM15 Putative RNA-binding protein 15 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 619.7941 2 614.789727 1227.5649 79172.16 0.28897 0.00017765 0.53133 0.00032666 0.8203 0.00050431 614.790636514402 619.793808399194 83.98 1.0839 83.98 83.403 84.487 0 259 101 4 0 0 0 0.0001967 2 44857 88.187 42.93 3 1.3744 1.6568 0 18717000 7606100 11111000 5425 260 2791 3099 8842;8843 8842 419 SLSPGTGGGVR 11 0 1 Phospho (STY) _SLS(ph)PGTGGGVR_ S(0.001)LS(0.999)PGTGGGVR S(-32.09)LS(32.09)PGT(-38.21)GGGVR 0 0 1 0 A0A0G2JIJ9;A0A140T9U3;O43189 A0A0G2JIJ9 A0A0G2JIJ9 PHF1 PHD finger protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 534.2481 2 534.247695 1066.48084 86196.51 0.60649 0.00032402 -0.13541 -7.2342E-05 0.47108 0.00025167 534.247550696653 539.251834874882 46.551 0.69916 46.551 46.217 46.916 0 135 49 4 0 0 0 0.0076658 1 17735 61.435 19.04 3 1.044 1.1258 0 2422200 1106100 1316100 5426 339 2792 3100 8844 8844 533 SLSRTPSPPPFR 12 0 2 2 Phospho (STY) _SLSRT(ph)PS(ph)PPPFR_ S(0.03)LS(0.508)RT(0.611)PS(0.851)PPPFR S(-14.68)LS(-1.09)RT(1.09)PS(5.42)PPPFR 0 0 2 1 H0YGP9;E1B6W4;Q9P068;Q7L4I2 H0YGP9 H0YGP9 RSRC2 Arginine/serine-rich coiled-coil protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 501.225 3 501.224858 1500.65274 86871.02 0.53848 0.0002699 -0.11309 -5.6682E-05 0.42539 0.00021322 501.224789919418 507.896891562486 74.48 1.0116 74.48 73.998 75.009 0 260 90 6 0 0 0 0.031898 1 47104 40.237 27.405 6 0.41459 0.36018 0 11049000 7746900 3302500 5427 780 2793 3101 8845 8845 1322;2815 SLSSPTDNLELSLR 14 0 1 Phospho (STY) _SLS(ph)SPTDNLELSLR_ S(0.001)LS(0.586)S(0.407)PT(0.007)DNLELSLR S(-29.67)LS(1.58)S(-1.58)PT(-19.13)DNLELS(-55.68)LR 0 0 1 0 Q7Z2E5;B4DMF7;J3QRU8;A0A0C4DGN6;Q59FC3;Q9Y2X7 Q7Z2E5 Q7Z2E5 DKFZp686G1540;GIT1 ARF GTPase-activating protein GIT1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 811.3919 2 806.384917 1610.75528 70297.56 0.84503 0.00068142 0.39642 0.00031967 1.2414 0.0010011 806.384550417276 811.389564128235 113.81 0.61554 113.81 113.49 114.11 0 174 53 5 0 0 0 0.00013696 3 67534 76.262 65.982 5 2.2565 2.7152 0 18341000 5921700 12420000 5428 325 2794 3102 8846;8847;8848 8847 514;515 SLSSPTDNLELSLR 14 0 1 Phospho (STY) _SLSS(ph)PTDNLELSLR_ S(0.001)LS(0.203)S(0.737)PT(0.058)DNLELS(0.001)LR S(-27.92)LS(-5.6)S(5.6)PT(-11.06)DNLELS(-30.97)LR 0 0 1 0 Q7Z2E5;B4DMF7;J3QRU8;A0A0C4DGN6;Q59FC3;Q9Y2X7 Q7Z2E5 Q7Z2E5 DKFZp686G1540;GIT1 ARF GTPase-activating protein GIT1 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 811.3912 2 806.384917 1610.75528 NaN NaN NaN 0.32436 0.00026156 NaN NaN NaN NaN 121.14 0.64912 121.14 120.81 121.46 -7.6294E-06 0 0 0 0.0017499 1 78127 50.806 28.933 5 NaN NaN 0 5472800 0 5472800 5429 325 2794 3102 8849 8849 514;515 SLSVLSPR 8 0 1 Phospho (STY) _SLSVLS(ph)PR_ SLS(0.007)VLS(0.993)PR S(-41.51)LS(-21.84)VLS(21.84)PR 0 0 1 0 Q59F18;B3KY54;B3KUD6;B3KY41;B4E229;B4DI56;A0A087WVP4;A0A087X1R1;P53814 Q59F18 Q59F18 SMTN Smoothelin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 474.7437 2 469.738975 937.463397 88636.16 0.4732 0.00022228 -0.30816 -0.00014475 0.16505 7.7529E-05 469.738789432409 474.742900080979 84.049 0.7561 84.049 83.761 84.517 0 226 69 5 0 0 0 0.015691 1 53776 56.043 10.445 3 4.64 3.3279 0 28432000 5778200 22654000 5430 255 2795 3103 8850 8850 402 SLSYSPVER 9 0 1 2 Phospho (STY) _SLS(ph)YS(ph)PVER_ S(0.002)LS(0.994)Y(0.049)S(0.954)PVER S(-26.3)LS(24)Y(-13.19)S(13.19)PVER 0 0 2 0 A0A140VK53;Q9UQ35;I3L4U6;Q5JPB4 A0A140VK53 A0A140VK53 SRRM2;DKFZp667L0421 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 604.237 2 599.233069 1196.45159 79888.92 0.51706 0.00030984 0.22421 0.00013435 0.74127 0.00044419 599.233249611824 604.237136002421 69.161 0.84024 69.161 68.732 69.572 0 222 81 4 0 0 0 0.001451 2 34302 71.555 45.818 6 1.131 1.393 0 31804000 15654000 16150000 5431 383 2796 3104 8851;8852 8851 625;626 SLSYSPVER 9 0 1 2 Phospho (STY) _SLS(ph)YS(ph)PVER_ S(0.005)LS(0.749)Y(0.257)S(0.99)PVER S(-22.24)LS(4.76)Y(-4.76)S(18.69)PVER 0 0 2 0 A0A140VK53;Q9UQ35;I3L4U6;Q5JPB4 A0A140VK53 A0A140VK53 SRRM2;DKFZp667L0421 Serine/arginine repetitive matrix protein 2 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 599.2344 2 599.233069 1196.45159 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.001 1 75.001 74.501 75.501 0 0 0 0 0.021989 1 47708 43.544 22.244 6 5432 383 2796 3104 8853 8853 625;626 SLTDPSQESHTEAISDAETSSSDISFSGIATR 32 0 1 Phospho (STY) _SLT(ph)DPSQESHTEAISDAETSSSDISFSGIATR_ S(0.008)LT(0.167)DPS(0.155)QES(0.155)HT(0.155)EAIS(0.155)DAET(0.155)S(0.037)S(0.009)S(0.003)DISFSGIATR S(-13.05)LT(0.32)DPS(-0.32)QES(-0.32)HT(-0.32)EAIS(-0.32)DAET(-0.32)S(-6.56)S(-12.53)S(-18.2)DIS(-32.73)FS(-37.88)GIAT(-45.41)R 0 0 1 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1139.8328 3 1136.16505 3405.47331 56902.13 0.23119 0.00026267 0.48496 0.00055099 0.71615 0.00081366 1136.499594194 1139.83574749103 109.44 1.1196 109.44 109.01 110.13 0 474 86 9 0 0 0 1.2936E-11 4 64648 47.104 47.104 13 0.54297 0.68434 0 59723000 36712000 23011000 5433 1097 2797 3105 8854;8855;8856;8857 8857 2072;2073;2074;2943;2944 SLTDPSQESHTEAISDAETSSSDISFSGIATR 32 0 1 2 Phospho (STY) _SLTDPSQESHTEAIS(ph)DAET(ph)SSSDISFSGIATR_ SLT(0.001)DPS(0.017)QES(0.015)HT(0.015)EAIS(0.451)DAET(0.451)S(0.451)S(0.451)S(0.145)DIS(0.004)FSGIATR S(-37.85)LT(-30.12)DPS(-17.02)QES(-17.02)HT(-17.02)EAIS(0)DAET(0)S(0)S(0)S(-5.83)DIS(-22.35)FS(-32.4)GIAT(-45.23)R 0 0 2 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1163.4883 3 1162.82049 3485.43964 56443.11 0.15515 0.00018041 -0.48533 -0.00056436 -0.33019 -0.00038395 1163.48923550366 1166.48959620328 111.39 0.75664 111.39 111.15 111.91 0 535 65 12 0 0 0 1.568E-23 1 65817 64.176 64.176 78 0.54146 0.68363 0 97733000 59731000 38002000 5434 1097 2797 3106 8858 8858 2072;2073;2074;2943;2944 SLTQTFATVEVGR 13 0 1 Phospho (STY) _S(ph)LTQTFATVEVGR_ S(0.543)LT(0.433)QT(0.024)FAT(0.001)VEVGR S(0.99)LT(-0.99)QT(-13.61)FAT(-29.86)VEVGR 0 0 1 0 Q5QJE6;J3KP30;B7Z854 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 744.8592 2 744.858338 1487.70212 NaN NaN NaN -0.95775 -0.00071338 NaN NaN NaN NaN 108.8 0.40781 108.8 108.65 109.06 0 0 0 0 0.0030053 1 63774 53.237 37.347 4 NaN NaN 0 6112300 6112300 0 5435 1097 2798 3107 8859 8859 2075 SLTRSPPAIR 10 0 2 2 Phospho (STY) _S(ph)LTRS(ph)PPAIR_ S(0.949)LT(0.068)RS(0.983)PPAIR S(12.62)LT(-12.62)RS(17.36)PPAIR 0 0 2 1 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 639.2999 2 629.291253 1256.56795 74483.55 0.65813 0.00041416 0.023729 1.4933E-05 0.68186 0.00042909 629.291287298753 639.299380993854 65.761 1.3509 65.761 64.984 66.335 0 477 102 6 0 0 0 0.0056194 2 31413 53.136 25.797 3 0.82022 1.0211 0 102740000 55040000 47699000 5436 383 2799 3108 8860;8861 8860 627;628;2702 SLTRSPPAIR 10 0 2 2 Phospho (STY) _S(ph)LTRS(ph)PPAIR_ S(0.857)LT(0.16)RS(0.983)PPAIR S(7.69)LT(-7.69)RS(16.88)PPAIR 0 0 2 1 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 629.2914 2 629.291253 1256.56795 76249.38 0.97322 0.00061244 -0.21182 -0.0001333 0.7614 0.00047914 629.29115679546 639.299355940037 61.497 1.9566 61.497 60.582 62.539 0 816 182 7 0 0 0 0.0051395 1 38049 54.827 26.835 3 0.565 0.49031 0 58292000 36241000 22051000 5437 383 2799 3108 8862 8862 627;628;2702 SLTRSPPAIR 10 0 2 3 Phospho (STY) _S(ph)LT(ph)RS(ph)PPAIR_ S(1)LT(1)RS(1)PPAIR S(40.02)LT(40.02)RS(40.02)PPAIR 0 0 3 1 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 679.2833 2 669.274418 1336.53428 73793.64 0.67872 0.00045425 0.057589 3.8543E-05 0.73631 0.0004928 669.274373232687 679.282695702144 65.328 1.4638 65.328 64.635 66.099 0 585 110 7 0 0 0 0.0056896 1 31769 40.025 27.394 1 0.57411 0.71678 0 203740000 125790000 77951000 5438 383 2799 3109 8863 8863 627;628;2702 SLVAFEGEGQFEK 13 1 0 Phospho (STY) _S(ph)LVAFEGEGQFEK_ S(1)LVAFEGEGQFEK S(109.44)LVAFEGEGQFEK 0 0 1 0 O96028;Q05CW4;D6R9V2 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 760.8388 2 760.837072 1519.65959 NaN NaN NaN -0.95723 -0.00072829 NaN NaN NaN NaN 105.25 0.67093 105.25 104.79 105.46 0 0 0 0 3.3563E-16 1 61008 109.44 66.466 1 NaN NaN 0 6912400 6912400 0 5439 953 2800 3110 8864 8864 1657 SLVAFEGEGQFEK 13 1 0 Phospho (STY) _S(ph)LVAFEGEGQFEK_ S(1)LVAFEGEGQFEK S(84.57)LVAFEGEGQFEK 0 0 1 0 O96028;Q05CW4;D6R9V2 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 765.347 2 760.837072 1519.65959 70049.88 1.1949 0.00090913 0.067069 5.1028E-05 1.262 0.00096016 761.338627026982 764.844336399052 111.05 0.86604 111.05 110.63 111.49 0 302 82 5 0 0 0 0.00013546 2 71470 84.566 55.934 1 1.2722 0.98363 0 15877000 7635900 8241200 5440 953 2800 3110 8865;8866 8865 1657 SLVESVSSSPNK 12 1 0 Phospho (STY) _SLVESVSSS(ph)PNK_ SLVES(0.006)VS(0.069)S(0.354)S(0.571)PNK S(-79.2)LVES(-19.88)VS(-9.2)S(-2.08)S(2.08)PNK 0 0 1 0 A8K0P2;Q9H2U2 A8K0P2 A8K0P2 PPA2 Inorganic pyrophosphatase 2, mitochondrial ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 661.3113 2 657.302865 1312.59118 NaN NaN NaN 0.47335 0.00031114 NaN NaN NaN NaN 58.92 0.59695 58.92 58.64 59.237 0 0 0 0 0.00037852 1 26253 83.358 55.877 5 NaN NaN 0 5553900 0 5553900 5441 441 2801 3111 8867 8867 765 SLVHDLFQK 9 1 0 Unmodified _SLVHDLFQK_ 0 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 543.8014 2 543.800749 1085.58694 NaN NaN NaN -0.12083 -6.5705E-05 NaN NaN NaN NaN 124.26 0.70486 124.26 123.91 124.62 0 0 0 0 0.0048153 1 75194 67.993 43.838 1 NaN NaN 0 5068100 5068100 0 5442 1220 2802 3112 8868 8868 SLVHDLFQK 9 1 0 Unmodified _SLVHDLFQK_ 0 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 543.8013 2 543.800749 1085.58694 NaN NaN NaN NaN NaN NaN NaN NaN NaN 124.79 1 124.79 124.29 125.29 -7.6294E-06 0 0 0 0.001726 1 75651 78.149 46.845 1 5443 1220 2802 3112 8869 8869 SLVHDLFQK 9 1 0 Unmodified _SLVHDLFQK_ 0 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 543.8005 2 543.800749 1085.58694 NaN NaN NaN NaN NaN NaN NaN NaN NaN 124.88 1 124.88 124.38 125.38 7.6294E-06 0 0 0 0.003606 1 75704 72.23 49.301 1 5444 1220 2802 3112 8870 8870 SLYASSPGGVYATR 14 0 1 Phospho (STY) _SLYASS(ph)PGGVYATR_ SLYAS(0.144)S(0.856)PGGVYATR S(-102.84)LY(-76.56)AS(-7.76)S(7.76)PGGVY(-92.74)AT(-51.48)R 0 0 1 0 V9HWE1;Q53HU8;P08670;B3KRK8;B0YJC4;A0A1B0GUA0;A0A1B0GTT5;A0A1B0GVG8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 759.8474 2 754.842688 1507.67082 68665.24 0.85182 0.00064299 -0.0027965 -2.1109E-06 0.84903 0.00064088 754.842759729534 759.846645410077 79.115 2.3699 79.115 78.26 80.63 0 1407 215 9 0 0 0 7.0849E-51 7 41564 162.41 141.55 6 0.90393 1.1447 0 537620000 281380000 256240000 5445 960 2803 3113 8871;8872;8873;8874;8875;8876;8877 8873 1686 SLYASSPGGVYATR 14 0 1 Phospho (STY) _SLYASS(ph)PGGVYATR_ SLYAS(0.246)S(0.754)PGGVYATR S(-56.61)LY(-40.31)AS(-4.86)S(4.86)PGGVY(-51.89)AT(-36.74)R 0 0 1 0 V9HWE1;Q53HU8;P08670;B3KRK8;B0YJC4;A0A1B0GUA0;A0A1B0GTT5;A0A1B0GVG8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 759.8467 2 754.842688 1507.67082 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.275 1 78.275 77.775 78.775 0 0 0 0 0.0013811 1 40992 95.57 73.338 6 5446 960 2803 3113 8878 8878 1686 SLYASSPGGVYATR 14 0 1 Phospho (STY) _SLYASS(ph)PGGVYATR_ SLYAS(0.428)S(0.572)PGGVYAT(0.001)R S(-68.62)LY(-54.82)AS(-1.26)S(1.26)PGGVY(-57.61)AT(-28.19)R 0 0 1 0 V9HWE1;Q53HU8;P08670;B3KRK8;B0YJC4;A0A1B0GUA0;A0A1B0GTT5;A0A1B0GVG8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 754.8439 2 754.842688 1507.67082 68688.96 1.0072 0.00076031 -0.019827 -1.4967E-05 0.98742 0.00074534 754.843361717022 759.846948213496 80.833 2.5702 80.833 79.807 82.377 0 1424 242 10 0 0 0 7.1278E-06 5 52040 84.759 69.728 6 6.3546 4.0925 0 839080000 111010000 728060000 5447 960 2803 3113 8879;8880;8881;8882;8883 8882 1686 SLYASSPGGVYATR 14 0 1 Phospho (STY) _SLYASS(ph)PGGVYATR_ SLYAS(0.062)S(0.93)PGGVYAT(0.008)R S(-55.2)LY(-42.76)AS(-11.78)S(11.78)PGGVY(-60.32)AT(-20.72)R 0 0 1 0 V9HWE1;Q53HU8;P08670;B3KRK8;B0YJC4;A0A1B0GUA0;A0A1B0GTT5;A0A1B0GVG8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 759.8487 2 754.842688 1507.67082 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.819 1 65.819 65.319 66.319 0 0 0 0 2.2946E-07 1 41123 71.529 52.706 6 5448 960 2803 3113 8884 8884 1686 SLYASSPGGVYATR 14 0 1 Phospho (STY) _SLYASS(ph)PGGVYATR_ SLY(0.001)AS(0.178)S(0.78)PGGVYAT(0.042)R S(-41.16)LY(-31.47)AS(-6.43)S(6.43)PGGVY(-41.49)AT(-12.69)R 0 0 1 0 V9HWE1;Q53HU8;P08670;B3KRK8;B0YJC4;A0A1B0GUA0;A0A1B0GTT5;A0A1B0GVG8 V9HWE1 V9HWE1 HEL113;VIM Vimentin MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 759.8481 2 754.842688 1507.67082 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.003 1 66.003 65.503 66.503 0 0 0 0 6.8986E-05 1 41240 55.724 39.5 6 5449 960 2803 3113 8885 8885 1686 SMDLSEYIIRGDDEEWNEVLNK 22 1 1 Oxidation (M) _SM(ox)DLSEYIIRGDDEEWNEVLNK_ SM(1)DLSEYIIRGDDEEWNEVLNK SM(42.17)DLSEYIIRGDDEEWNEVLNK 0 1 0 1 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 897.4213 3 891.077919 2670.21193 68804.59 0.81709 0.00072809 -0.05838 -5.2021E-05 0.75871 0.00067607 891.41135223838 897.420085474808 133.3 0.14845 133.3 133.22 133.37 0 25 9 4 0 0 0 6.2113E-05 1 81125 42.172 29.618 1 1.1489 1.2565 0 10092000 5052100 5040100 5450 1202 2804 3114 8886 8886 336 SNDRNSMDIQCEVDALLER 19 0 2 Oxidation (M),Phospho (STY) _S(ph)NDRNSM(ox)DIQCEVDALLER_ SNDRNSM(1)DIQCEVDALLER S(0.635)NDRNS(0.365)MDIQCEVDALLER SNDRNSM(76.77)DIQCEVDALLER S(2.4)NDRNS(-2.4)MDIQCEVDALLER 0 1 1 1 H7BYN4;Q02241;H0YME6 H7BYN4 H7BYN4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 794.673 3 787.666406 2359.97739 68299.45 0.92817 0.00073109 -0.5878 -0.00046299 0.34037 0.0002681 787.665993024358 794.338459515587 123.27 1.137 123.27 122.69 123.83 0 695 100 9 0 0 0 2.5718E-10 4 74286 76.768 69.07 2 1.1414 1.4166 0 48483000 24023000 24460000 5451 879 2805 3115 8887;8888;8889;8890 8888 239 1487 SNEDQSMGNWQIK 13 1 0 Oxidation (M),Phospho (STY) _S(ph)NEDQSM(ox)GNWQIK_ SNEDQSM(1)GNWQIK S(1)NEDQSMGNWQIK SNEDQSM(89.01)GNWQIK S(54.48)NEDQS(-54.48)MGNWQIK 0 1 1 0 P02545;W8QEH3;Q5TCI8;Q5I6Y5;A0A0C4DGC5;B4DFR3 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 820.8289 2 816.821627 1631.6287 NaN NaN NaN -0.36893 -0.00030135 NaN NaN NaN NaN 66.179 0.4734 66.179 65.849 66.323 0 0 0 0 1.9475E-06 2 32049 89.013 62.865 2 NaN NaN 0 7455800 0 7455800 5452 954 2806 3116 8891;8892 8892 260 1661 SNEDSLILEK 10 1 0 Phospho (STY) _SNEDS(ph)LILEK_ SNEDS(1)LILEK S(-89.96)NEDS(89.96)LILEK 0 0 1 0 A0A0U1RRH6;O94880 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 614.2792 2 614.278858 1226.54316 78429.57 0.62555 0.00038426 0.0074856 4.5983E-06 0.63304 0.00038886 614.278775792447 618.285838281018 81.095 1.3658 81.095 80.454 81.819 0 423 125 5 0 0 0 5.0214E-15 4 43232 140.24 107.64 2 0.4416 0.55622 0 50544000 34396000 16148000 5453 368 2807 3117 8893;8894;8895;8896 8895 579;580 SNEDSLILEK 10 1 0 Phospho (STY) _S(ph)NEDSLILEK_ S(1)NEDSLILEK S(50.4)NEDS(-50.4)LILEK 0 0 1 0 A0A0U1RRH6;O94880 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 614.2789 2 614.278858 1226.54316 80230.98 0.23138 0.00014213 -0.21935 -0.00013474 0.012031 7.3902E-06 614.27906286642 618.285790340897 83.659 1.1198 83.659 83.111 84.231 0 194 103 4 0 0 0 0.00021715 2 44733 89.356 54.061 2 0.7907 1.0026 0 35607000 21337000 14270000 5454 368 2807 3117 8897;8898 8897 579;580 SNEDSLILEK 10 1 0 Phospho (STY) _S(ph)NEDSLILEK_ S(0.999)NEDS(0.001)LILEK S(29.63)NEDS(-29.63)LILEK 0 0 1 0 A0A0U1RRH6;O94880 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 618.2862 2 614.278858 1226.54316 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.09 1 83.09 82.59 83.59 0 0 0 0 0.004281 1 44500 56.936 32.083 2 5455 368 2807 3117 8899 8899 579;580 SNEDSLILEK 10 1 0 Phospho (STY) _SNEDS(ph)LILEK_ SNEDS(1)LILEK S(-59.4)NEDS(59.4)LILEK 0 0 1 0 A0A0U1RRH6;O94880 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 618.2864 2 614.278858 1226.54316 78346.44 0.85963 0.00052805 -0.021591 -1.3263E-05 0.83804 0.00051479 614.278784366173 618.285876051158 82.372 1.0424 82.372 81.697 82.74 0 459 96 8 0 0 0 3.2077E-06 2 52961 104.24 71.404 2 1.3706 0.91048 0 84490000 37996000 46494000 5456 368 2807 3117 8900;8901 8901 579;580 SNEDSLILEK 10 1 0 Phospho (STY) _S(ph)NEDSLILEK_ S(1)NEDSLILEK S(41.01)NEDS(-41.01)LILEK 0 0 1 0 A0A0U1RRH6;O94880 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 618.2866 2 614.278858 1226.54316 78779.32 0.7644 0.00046956 0.44686 0.0002745 1.2113 0.00074406 614.278805168303 618.286098791242 84.979 0.90374 84.979 84.541 85.444 0 307 83 6 0 0 0 0.0055727 1 54465 66.023 46.364 2 1.4301 1.0727 0 18752000 7903100 10848000 5457 368 2807 3117 8902 8902 579;580 SNFSNSADDIK 11 1 0 Unmodified _SNFSNSADDIK_ 0 0 0 0 V9HWG0;P45973;Q6I9T7 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 599.2734 2 599.272749 1196.53095 79928.93 0.68858 0.00041265 0.40735 0.00024412 1.0959 0.00065676 599.272546914972 603.280440627667 59.106 0.72637 59.106 58.737 59.464 0 172 58 6 0 0 0 3.4102E-05 1 26367 96.342 77.67 1 0.57437 0.70246 0 19604000 11891000 7712500 5458 993 2808 3118 8903 8903 SNFSNSADDIK 11 1 0 Phospho (STY) _SNFSNS(ph)ADDIK_ SNFS(0.064)NS(0.936)ADDIK S(-38)NFS(-11.67)NS(11.67)ADDIK 0 0 1 0 V9HWG0;P45973;Q6I9T7 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 643.264 2 639.255914 1276.49728 77070.76 1.1703 0.0007481 -0.24332 -0.00015554 0.92695 0.00059256 639.255706226832 643.263056614817 40.309 0.61185 40.309 40.074 40.686 0 216 57 6 0 0 0 0.010986 1 23356 51.092 37.062 3 0.41787 0.31996 0 17164000 11772000 5391700 5459 993 2808 3119 8904 8904 1769 SNILSNEMK 9 1 0 Oxidation (M),Phospho (STY) _S(ph)NILSNEM(ox)K_ SNILSNEM(1)K S(1)NILSNEMK SNILSNEM(52.69)K S(40.74)NILS(-40.74)NEMK 0 1 1 0 Q9NTJ3;E9PD53;B3KXX5;Q6P169;C9JR83;Q6NSG3;Q58F29 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 570.2488 2 566.241222 1130.46789 83718.35 0.32984 0.00018677 0.062953 3.5646E-05 0.3928 0.00022242 566.241169627076 570.248419253981 52.044 0.90274 52.044 51.684 52.586 0 151 68 5 0 0 0 0.011337 1 21485 52.693 43.83 2 1.1774 1.3783 0 3285300 1419300 1866000 5460 1220 2809 3120 8905 8905 347 2473 SNLSKGTGSRK 11 2 1 Acetyl (Protein N-term),Phospho (STY) _(ac)SNLSKGT(ph)GSRK_ SNLS(0.002)KGT(0.499)GS(0.499)RK S(-46.03)NLS(-23.66)KGT(0)GS(0)RK 1 0 1 2 Q53RD1;A0A024R475;Q13618 Q53RD1 Q53RD1 CUL3 Cullin-3 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 628.8036 2 628.803366 1255.59218 NaN NaN NaN -0.0036282 -2.2814E-06 NaN NaN NaN NaN 59.909 0.54183 59.909 59.7 60.241 -3.8147E-06 0 0 0 0.005884 1 26952 50.04 10.039 4 NaN NaN 0 123970000 123970000 0 5461 86 2810 3121 8906 8906 113;2630 SNMSPHGLPAR 11 0 1 Oxidation (M),Phospho (STY) _SNM(ox)S(ph)PHGLPAR_ SNM(1)SPHGLPAR S(0.014)NMS(0.986)PHGLPAR SNM(63.47)SPHGLPAR S(-18.4)NMS(18.4)PHGLPAR 0 1 1 0 Q59FW1;H0Y4T7;A0A024R6P5;E7ESY4;Q13330 Q59FW1 Q59FW1 MTA1 Metastasis-associated protein MTA1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 631.7709 2 631.771012 1261.52747 76231.06 0.72241 0.0004564 -0.35065 -0.00022153 0.37176 0.00023487 631.770900246817 636.775029773391 49.242 1.2355 49.242 48.623 49.859 0 444 98 6 0 0 0 0.0062545 1 19423 63.473 46.697 2 0.75015 0.91374 0 20987000 11806000 9181000 5462 124 2811 3122 8907 8907 26 185 SNMSPHGLPAR 11 0 1 Oxidation (M),Phospho (STY) _SNM(ox)S(ph)PHGLPAR_ SNM(1)SPHGLPAR S(0.006)NMS(0.994)PHGLPAR SNM(65.96)SPHGLPAR S(-22.36)NMS(22.36)PHGLPAR 0 1 1 0 Q59FW1;H0Y4T7;A0A024R6P5;E7ESY4;Q13330 Q59FW1 Q59FW1 MTA1 Metastasis-associated protein MTA1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 636.7755 2 631.771012 1261.52747 75966.41 0.38265 0.00024174 0.78823 0.00049798 1.1709 0.00073972 631.771370184375 636.775482864073 22.906 0.55073 22.906 22.584 23.135 0 166 29 11 0 0 0 0.0050909 2 9420 65.956 44.3 2 1.0254 0.68866 0 104280000 49286000 54994000 5463 124 2811 3122 8908;8909 8908 26 185 SNMSPHGLPAR 11 0 1 Oxidation (M),Phospho (STY) _SNM(ox)S(ph)PHGLPAR_ SNM(1)SPHGLPAR S(0.21)NMS(0.79)PHGLPAR SNM(46.48)SPHGLPAR S(-5.77)NMS(5.77)PHGLPAR 0 1 1 0 Q59FW1;H0Y4T7;A0A024R6P5;E7ESY4;Q13330 Q59FW1 Q59FW1 MTA1 Metastasis-associated protein MTA1 MULTI-SECPEP 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 424.8531 3 421.516433 1261.52747 91065.97 -0.50165 -0.00021145 0.73989 0.00031188 0.23824 0.00010042 421.516696114721 424.85277183967 22.931 0.35801 22.931 22.737 23.095 0 128 18 9 0 0 0 0.014147 1 9411 46.481 33.344 2 1.1467 0.78846 0 46139000 20999000 25140000 5464 124 2811 3122 8910 8910 26 185 SNSPLPVPPSK 11 1 0 Phospho (STY) _SNS(ph)PLPVPPSK_ SNS(1)PLPVPPSK S(-58.36)NS(58.36)PLPVPPS(-155.55)K 0 0 1 0 V9HVZ0;A8K588;Q13247 V9HVZ0 V9HVZ0 HEL-S-91;SRSF6 Serine/arginine-rich splicing factor 6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 601.7947 2 601.794479 1201.5744 77867.28 0.6631 0.00039905 -0.032895 -1.9796E-05 0.63021 0.00037925 601.794396680917 605.801480318445 70.534 2.8178 70.534 69.162 71.98 0 1391 271 6 0 0 0 8.5955E-86 8 34902 197.63 184.63 3 0.91876 1.1367 0 263570000 136780000 126780000 5465 474 2812 3123 8911;8912;8913;8914;8915;8916;8917;8918 8913 825;826 SNSPLPVPPSK 11 1 0 Phospho (STY) _SNS(ph)PLPVPPSK_ S(0.018)NS(0.982)PLPVPPSK S(-17.28)NS(17.28)PLPVPPS(-75.92)K 0 0 1 0 V9HVZ0;A8K588;Q13247 V9HVZ0 V9HVZ0 HEL-S-91;SRSF6 Serine/arginine-rich splicing factor 6 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 601.7955 2 601.794479 1201.5744 78043.81 1.0566 0.00063586 -0.082299 -4.9527E-05 0.97431 0.00058634 601.794423998218 605.801456443778 67.733 3.7712 67.733 66.246 70.017 0 1914 335 8 0 0 0 0.00049004 7 43527 85.45 80.838 3 0.43095 0.28812 0 139620000 96292000 43328000 5466 474 2812 3123 8919;8920;8921;8922;8923;8924;8925 8925 825;826 SNVGGLLSPQRK 12 1 1 Phospho (STY) _SNVGGLLS(ph)PQRK_ SNVGGLLS(1)PQRK S(-37.36)NVGGLLS(37.36)PQRK 0 0 1 1 B1APR7;Q99504 B1APR7 B1APR7 EYA3 Eyes absent homolog;Eyes absent homolog 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 677.3537 2 668.342659 1334.67076 78243.3 0.79011 0.00052807 -0.88703 -0.00059284 -0.096911 -6.4769E-05 668.341400438497 677.35332196217 75.141 0.50701 75.141 74.877 75.384 0 115 44 4 0 0 0 0.0056752 1 38562 43.316 31.361 2 1.0691 1.1912 0 15936000 7133300 8803000 5467 523 2813 3124 8926 8926 889 SNYNLPMHK 9 1 0 Oxidation (M) _SNYNLPM(ox)HK_ SNYNLPM(1)HK SNYNLPM(128.61)HK 0 1 0 0 H3BM89;Q59GY2;P36578;B4DMJ2;B4DMJ6 H3BM89 H3BM89 RPL4 60S ribosomal protein L4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 560.2664 2 560.266216 1118.51788 77374.13 0.57405 0.00032162 -0.38891 -0.00021789 0.18514 0.00010373 560.266043995323 564.27300714811 65.877 0.55224 65.877 65.627 66.18 0 222 42 8 0 0 0 5.9991E-07 2 31824 128.61 101.48 1 1.4437 1.7831 0 576490000 234420000 342070000 5468 866 2814 3125 8927;8928 8928 233 SPAFVQLAPLSSK 13 1 0 Phospho (STY) _S(ph)PAFVQLAPLSSK_ S(1)PAFVQLAPLSSK S(96.82)PAFVQLAPLS(-96.82)S(-96.82)K 0 0 1 0 A6NEM2;P51610 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 716.8725 2 712.862892 1423.71123 74127.07 0.87309 0.0006224 -0.026099 -1.8605E-05 0.847 0.00060379 712.862561817381 716.87021794943 116.68 0.53091 116.68 116.39 116.92 0 167 46 5 0 0 0 1.027E-06 3 69669 97.86 93.706 3 0.9413 1.1168 0 10658000 5173100 5485200 5469 425 2815 3126 8929;8930;8931 8929 735 SPAPGAPTRSPSTPAK 16 1 1 Phospho (STY) _SPAPGAPT(ph)RSPSTPAK_ SPAPGAPT(0.406)RS(0.406)PS(0.094)T(0.094)PAK S(-41.89)PAPGAPT(0)RS(0)PS(-6.36)T(-6.36)PAK 0 0 1 1 Q9BQG0;I3L1L3;B4DE42;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 534.9285 3 534.594288 1600.76104 82057.6 0.52758 0.00028204 -0.10593 -5.6629E-05 0.42165 0.00022541 534.594296529695 540.601697771815 44.934 1.2131 44.934 44.369 45.582 0 645 89 11 0 0 0 0.00013373 2 16532 47.204 28.909 5 0.52626 0.62857 0 101970000 68136000 33833000 5470 1192 2816 3127 8932;8933 8932 2362;2980 SPAPGAPTRSPSTPAK 16 1 1 Phospho (STY) _SPAPGAPT(ph)RSPSTPAK_ SPAPGAPT(0.498)RS(0.498)PS(0.003)T(0.001)PAK S(-60.04)PAPGAPT(0)RS(0)PS(-22.33)T(-28.8)PAK 0 0 1 1 Q9BQG0;I3L1L3;B4DE42;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 801.3884 2 801.387794 1600.76104 68247.32 0.84413 0.00067647 0.094373 7.563E-05 0.9385 0.0007521 801.387881773089 810.399019147502 44.908 0.93898 44.908 44.468 45.407 -3.8147E-06 403 68 8 0 0 0 2.5686E-11 2 16627 91.657 63.89 5 0.4992 0.58279 0 33805000 22556000 11249000 5471 1192 2816 3127 8934;8935 8934 2362;2980 SPAPGAPTRSPSTPAK 16 1 1 Phospho (STY) _SPAPGAPT(ph)RSPSTPAK_ SPAPGAPT(0.523)RS(0.37)PS(0.091)T(0.017)PAK S(-64.21)PAPGAPT(1.5)RS(-1.5)PS(-7.6)T(-14.91)PAK 0 0 1 1 Q9BQG0;I3L1L3;B4DE42;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 534.9296 3 534.594288 1600.76104 81184.73 0.16387 8.7607E-05 0.34938 0.00018678 0.51325 0.00027438 534.594796230393 540.601916322025 22.884 0.61923 22.884 22.7 23.319 0 253 32 11 0 0 0 1.0208E-06 2 9373 75.533 53.865 5 0.58923 0.45618 0 548260000 337010000 211250000 5472 1192 2816 3127 8936;8937 8936 2362;2980 SPAPGAPTRSPSTPAK 16 1 1 Phospho (STY) _SPAPGAPTRS(ph)PSTPAK_ SPAPGAPT(0.22)RS(0.755)PS(0.019)T(0.006)PAK S(-78.16)PAPGAPT(-5.34)RS(5.34)PS(-15.95)T(-21.2)PAK 0 0 1 1 Q9BQG0;I3L1L3;B4DE42;B4DZZ1 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 801.3883 2 801.387794 1600.76104 67735.62 0.40038 0.00032086 0.4317 0.00034596 0.83209 0.00066683 801.388355924034 810.399322017545 22.885 0.60036 22.885 22.7 23.3 0 216 31 11 0 0 0 1.815E-16 1 9419 107.73 73.983 5 0.62222 0.48172 0 547320000 336460000 210860000 5473 1192 2816 3127 8938 8938 2362;2980 SPAQILISLESEER 14 0 1 Phospho (STY) _S(ph)PAQILISLESEER_ S(1)PAQILISLESEER S(84.57)PAQILIS(-84.57)LES(-84.57)EER 0 0 1 0 A0A0S2Z3B5;A0A0S2Z3J7;Q14205;E7EQR9;E7EQS5;A1L0U9;F8VX32;E7ESB2;A7E212;H0Y304;Q59HC3;A0A087WV90;E9PDN5;A0A087WTU7;A0A075B6G3;P11532 A0A0S2Z3B5 A0A0S2Z3B5 dystrophin;DMD Dystrophin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 831.407 2 826.400567 1650.78658 68809.41 1.0376 0.00085747 0.089678 7.411E-05 1.1273 0.00093158 826.400572823824 831.40489125609 126.43 0.3484 126.43 126.15 126.5 0 106 30 5 0 0 0 7.3312E-06 2 76539 84.566 77.158 3 2.2868 2.5901 0 10876000 4040300 6835800 5474 236 2817 3128 8939;8940 8939 363 SPDSATVSGYDIMK 14 1 0 Oxidation (M),Phospho (STY) _S(ph)PDSATVSGYDIM(ox)K_ SPDSATVSGYDIM(1)K S(1)PDSATVSGYDIMK SPDSATVSGYDIM(124.42)K S(36.32)PDS(-36.32)AT(-82.84)VS(-106.68)GY(-108.53)DIMK 0 1 1 0 J3KSW8;Q6WCQ1;B9EGI2;H0Y7E2;Q9Y6X7;H0Y2S9;K7EL39;Q96EE5;A8CGI1;J3QRL2;A8CGI0;H7C3G6 J3KSW8 J3KSW8 MPRIP;KIAA0864;M-RIP Myosin phosphatase Rho-interacting protein ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 787.8315 2 783.823304 1565.63205 NaN NaN NaN -0.045938 -3.6007E-05 NaN NaN NaN NaN 69.168 0.93976 69.168 68.66 69.6 0 0 0 0 9.7374E-36 2 34587 124.42 106.55 5 NaN NaN 0 20957000 0 20957000 5475 892 2818 3129 8941;8942 8942 245 1520 SPDSATVSGYDIMK 14 1 0 Oxidation (M),Phospho (STY) _S(ph)PDSATVSGYDIM(ox)K_ SPDSATVSGYDIM(1)K S(0.984)PDS(0.016)ATVSGYDIMK SPDSATVSGYDIM(72.68)K S(17.81)PDS(-17.81)AT(-46.32)VS(-63.19)GY(-66.96)DIMK 0 1 1 0 J3KSW8;Q6WCQ1;B9EGI2;H0Y7E2;Q9Y6X7;H0Y2S9;K7EL39;Q96EE5;A8CGI1;J3QRL2;A8CGI0;H7C3G6 J3KSW8 J3KSW8 MPRIP;KIAA0864;M-RIP Myosin phosphatase Rho-interacting protein MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 783.8231 2 783.823304 1565.63205 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.184 1 69.184 68.684 69.684 -7.6294E-06 0 0 0 3.627E-08 1 34419 72.681 60.445 5 5476 892 2818 3129 8943 8943 245 1520 SPEAVGPELEAEEK 14 1 0 Phospho (STY) _S(ph)PEAVGPELEAEEK_ S(1)PEAVGPELEAEEK S(229.9)PEAVGPELEAEEK 0 0 1 0 Q96N64 Q96N64 Q96N64 PWWP2A PWWP domain-containing protein 2A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 786.8505 2 782.842551 1563.67055 68903.14 0.90396 0.00070766 -0.14692 -0.00011502 0.75704 0.00059264 782.84243749847 786.849534254917 75.934 1.403 75.934 75.279 76.682 0 853 120 10 0 0 0 2.7402E-160 5 39359 229.9 203.99 1 0.85248 1.0536 0 422760000 223720000 199040000 5477 1185 2819 3130 8944;8945;8946;8947;8948 8946 2333 SPEAVGPELEAEEK 14 1 0 Phospho (STY) _S(ph)PEAVGPELEAEEK_ S(1)PEAVGPELEAEEK S(74.79)PEAVGPELEAEEK 0 0 1 0 Q96N64 Q96N64 Q96N64 PWWP2A PWWP domain-containing protein 2A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 782.8434 2 782.842551 1563.67055 68509.9 1.2039 0.00094243 0.011913 9.3258E-06 1.2158 0.00095175 782.842688329454 786.849659578232 77.741 1.5822 77.741 77.118 78.7 0 1103 147 12 0 0 0 0.00016925 4 49874 74.789 63.843 1 1.4775 0.98543 0 593140000 237350000 355790000 5478 1185 2819 3130 8949;8950;8951;8952 8952 2333 SPEEEAHLAR 10 0 1 Phospho (STY) _S(ph)PEEEAHLAR_ S(1)PEEEAHLAR S(61.96)PEEEAHLAR 0 0 1 0 H3BSZ2 H3BSZ2 H3BSZ2 PRDM11 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 614.7654 2 609.761167 1217.50778 77831.09 0.39023 0.00023795 0.14933 9.1056E-05 0.53956 0.000329 609.760902712719 614.765589591987 51.173 1.2724 51.173 50.509 51.781 0 386 100 6 0 0 0 0.007354 2 20608 61.958 42.864 1 0.37829 0.46456 0 22960000 16408000 6551100 5479 873 2820 3131 8953;8954 8954 1482 SPEEEAHLAR 10 0 1 Phospho (STY) _S(ph)PEEEAHLAR_ S(1)PEEEAHLAR S(105.46)PEEEAHLAR 0 0 1 0 H3BSZ2 H3BSZ2 H3BSZ2 PRDM11 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 609.7612 2 609.761167 1217.50778 77576.84 0.74886 0.00045663 -0.43172 -0.00026325 0.31714 0.00019338 609.760940680888 614.765128960509 25.19 0.3873 25.19 24.976 25.363 0 95 19 8 0 0 0 3.6527E-06 1 11375 105.46 81.609 1 0.80041 0.56149 0 34347000 19799000 14548000 5480 873 2820 3131 8955 8955 1482 SPEEHLEEMMK 11 1 0 2 Oxidation (M),Phospho (STY) _S(ph)PEEHLEEM(ox)M(ox)K_ SPEEHLEEM(1)M(1)K S(1)PEEHLEEMMK SPEEHLEEM(122.34)M(122.34)K S(122.34)PEEHLEEMMK 0 2 1 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 740.2855 2 736.277675 1470.5408 NaN NaN NaN -0.035829 -2.638E-05 NaN NaN NaN NaN 45.856 1.8475 45.856 45.313 47.16 0 0 0 0 8.0876E-24 2 17195 122.34 71.782 1 NaN NaN 0 206620000 0 206620000 5481 1232 2821 3132 8956;8957 8956 355;356 2515 SPEEHLEEMMK 11 1 0 2 Oxidation (M),Phospho (STY) _S(ph)PEEHLEEM(ox)M(ox)K_ SPEEHLEEM(1)M(1)K S(1)PEEHLEEMMK SPEEHLEEM(121.04)M(121.04)K S(121.04)PEEHLEEMMK 0 2 1 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 740.286 2 736.277675 1470.5408 NaN NaN NaN -0.21005 -0.00015465 NaN NaN NaN NaN 21.116 0.75779 21.116 20.878 21.636 -1.9073E-06 0 0 0 1.4614E-23 1 7786 121.04 73.375 1 NaN NaN 0 117510000 0 117510000 5482 1232 2821 3132 8958 8958 355;356 2515 SPEEHLEEMMK 11 1 0 Oxidation (M),Phospho (STY) _S(ph)PEEHLEEM(ox)MK_ SPEEHLEEM(0.844)M(0.156)K S(1)PEEHLEEMMK SPEEHLEEM(7.33)M(-7.33)K S(88.02)PEEHLEEMMK 0 1 1 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 732.2877 2 728.280218 1454.54588 NaN NaN NaN -0.78682 -0.00057302 NaN NaN NaN NaN 42.609 1.9802 42.609 41.852 43.832 0 0 0 0 4.2733E-06 1 25210 88.021 75.638 2 NaN NaN 0 15654000 0 15654000 5483 1232 2821 3133 8959 8959 355;356 2515 SPEETATQVPSLESLTLK 18 1 0 Phospho (STY) _S(ph)PEETATQVPSLESLTLK_ S(1)PEETATQVPSLESLTLK S(51.92)PEET(-51.92)AT(-86.23)QVPS(-115.59)LES(-120)LT(-121)LK 0 0 1 0 Q9HCK8 Q9HCK8 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1005.491 2 1005.48757 2008.96058 NaN NaN NaN 0.33135 0.00033316 NaN NaN NaN NaN 121.79 0.60343 121.79 121.52 122.12 -7.6294E-06 0 0 0 2.6599E-31 1 73442 121.72 110.82 6 NaN NaN 0 11893000 11893000 0 5484 1211 2822 3134 8960 8960 2415 SPEGLISR 8 0 1 Phospho (STY) _S(ph)PEGLISR_ S(1)PEGLISR S(60.99)PEGLIS(-60.99)R 0 0 1 0 A0A075B784;A0A024R8V6;Q9P275;B3KMW2;K7EMM6;Q9H9C5;E9PEW0 A0A075B784 A0A075B784 USP36;DUB1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 474.7248 2 469.720782 937.427012 89329.13 0.21045 9.8852E-05 0.038845 1.8246E-05 0.24929 0.0001171 469.720802576258 474.724876986563 62.6 1.313 62.6 61.807 63.12 0 350 100 5 0 0 0 0.0061474 2 29469 77.662 23.489 2 1.2462 1.5359 0 32133000 13850000 18284000 5485 157 2823 3135 8961;8962 8962 242 SPEGLISR 8 0 1 Phospho (STY) _S(ph)PEGLISR_ S(1)PEGLISR S(45.19)PEGLIS(-45.19)R 0 0 1 0 A0A075B784;A0A024R8V6;Q9P275;B3KMW2;K7EMM6;Q9H9C5;E9PEW0 A0A075B784 A0A075B784 USP36;DUB1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 474.7249 2 469.720782 937.427012 88711.59 0.63328 0.00029747 -0.41761 -0.00019616 0.21567 0.00010131 469.72065064923 474.7245538826 54.845 1.0705 54.845 54.332 55.403 0 424 93 6 0 0 0 0.015461 1 33270 56.359 19.935 2 1.3603 0.99957 0 24174000 9592700 14581000 5486 157 2823 3135 8963 8963 242 SPELSTVDIGFK 12 1 0 Phospho (STY) _S(ph)PELSTVDIGFK_ S(1)PELSTVDIGFK S(38.17)PELS(-38.17)T(-43.29)VDIGFK 0 0 1 0 Q15916 Q15916 Q15916 ZBTB6 Zinc finger and BTB domain-containing protein 6 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 690.8301 2 686.823433 1371.63231 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112 1 112 111.5 112.5 0 0 0 0 0.00063209 1 66385 59.227 37.927 3 5487 1077 2824 3136 8964 8964 2033 SPERPTGDLR 10 0 2 Phospho (STY) _S(ph)PERPTGDLR_ S(0.988)PERPT(0.012)GDLR S(19.18)PERPT(-19.18)GDLR 0 0 1 1 Q5T200;Q6PJ96;Q5T9K0 Q5T200 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 604.2772 2 604.276984 1206.53942 78244.07 0.2127 0.00012853 0.51285 0.00030991 0.72556 0.00043844 604.277274504828 614.285544519803 22.938 0.29483 22.938 22.777 23.072 0 85 15 8 0 0 0 0.01339 2 9506 44.612 44.612 2 0.41436 0.35689 0 20755000 14898000 5857200 5488 1102 2825 3137 8965;8966 8965 2086 SPESQNLIDGTK 12 1 0 Phospho (STY) _S(ph)PESQNLIDGTK_ S(0.968)PES(0.032)QNLIDGTK S(14.79)PES(-14.79)QNLIDGT(-42.32)K 0 0 1 0 B3KXW2;A0A024R283;Q9HCE3 B3KXW2 B3KXW2 ZNF532 Zinc finger protein 532 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 684.8065 2 684.805771 1367.59699 NaN NaN NaN NaN NaN NaN NaN NaN NaN 61.886 1 61.886 61.386 62.386 -3.8147E-06 0 0 0 0.0053624 1 28708 44.968 29.429 3 5489 61 2826 3138 8967 8967 80 SPFAAAVGQEK 11 1 0 Phospho (STY) _S(ph)PFAAAVGQEK_ S(1)PFAAAVGQEK S(77.64)PFAAAVGQEK 0 0 1 0 B7ZLF4;A0A024R7C4;B4DUY9;Q8N9T8;B4DUT2 B7ZLF4 B7ZLF4 KRI1;FLJ12949 Protein KRI1 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 592.7709 2 592.771003 1183.52745 81482.53 0.34495 0.00020448 -0.1397 -8.281E-05 0.20526 0.00012167 592.770969197393 596.777626323228 68.885 1.1952 68.885 68.249 69.444 0 203 116 4 0 0 0 0.0014447 1 34075 77.644 59.658 1 0.50859 0.62583 0 22602000 12037000 10564000 5490 131 2827 3139 8968 8968 196 SPFAAAVGQEK 11 1 0 Phospho (STY) _S(ph)PFAAAVGQEK_ S(1)PFAAAVGQEK S(56.95)PFAAAVGQEK 0 0 1 0 B7ZLF4;A0A024R7C4;B4DUY9;Q8N9T8;B4DUT2 B7ZLF4 B7ZLF4 KRI1;FLJ12949 Protein KRI1 homolog ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 596.7786 2 592.771003 1183.52745 NaN NaN NaN -0.041213 -2.443E-05 NaN NaN NaN NaN 68.703 0.28663 68.703 68.498 68.785 0 0 0 0 0.0083561 1 34055 56.951 40.419 1 NaN NaN 0 9630600 0 9630600 5491 131 2827 3139 8969 8969 196 SPFAAAVGQEK 11 1 0 Phospho (STY) _S(ph)PFAAAVGQEK_ S(1)PFAAAVGQEK S(70.62)PFAAAVGQEK 0 0 1 0 B7ZLF4;A0A024R7C4;B4DUY9;Q8N9T8;B4DUT2 B7ZLF4 B7ZLF4 KRI1;FLJ12949 Protein KRI1 homolog MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 596.7784 2 592.771003 1183.52745 80935 1.0246 0.00060735 -0.10716 -6.352E-05 0.91744 0.00054383 592.770590089782 596.778094553402 65.285 1.0494 65.285 64.79 65.839 0 319 95 4 0 0 0 0.0033109 2 40649 70.622 52.354 1 1.1403 0.85322 0 9717500 4679600 5037900 5492 131 2827 3139 8970;8971 8970 196 SPFLHSGMK 9 1 0 Oxidation (M),Phospho (STY) _S(ph)PFLHSGM(ox)K_ SPFLHSGM(1)K S(1)PFLHSGMK SPFLHSGM(61.21)K S(44.64)PFLHS(-44.64)GMK 0 1 1 0 A0A0S2Q0B1;O14497;Q4LE49;H0Y488;A0A1B0GTU5;H0YEW5 A0A0S2Q0B1 A0A0S2Q0B1 ARID1A;ARID1A variant protein AT-rich interactive domain-containing protein 1A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 554.2429 2 550.235742 1098.45693 81865.35 0.69706 0.00038355 -0.067935 -3.738E-05 0.62912 0.00034616 550.235904320867 554.242590903786 60.434 0.53833 60.434 60.136 60.674 -3.8147E-06 144 36 7 0 0 0 0.0067767 1 27357 61.213 48.038 2 0.79563 1.0092 0 37045000 20966000 16079000 5493 344 2828 3140 8972 8972 81 543 SPFNSPSPQDSPR 13 0 1 3 Phospho (STY) _S(ph)PFNS(ph)PSPQDS(ph)PR_ S(1)PFNS(0.964)PS(0.42)PQDS(0.615)PR S(39.74)PFNS(12.12)PS(-1.78)PQDS(1.78)PR 0 0 3 0 Q6FI30;P08651;B7Z4T6 Q6FI30 Q6FI30 NFIC Nuclear factor 1;Nuclear factor 1 C-type MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 833.2859 2 828.280625 1654.5467 66857.23 0.83919 0.00069509 -0.039362 -3.2603E-05 0.79983 0.00066249 828.280284982677 833.285370039889 45.596 1.0014 45.596 45.033 46.035 -3.8147E-06 242 71 5 0 0 0 0.0069309 1 17099 51.265 41.312 4 0.77261 0.84467 0 5793300 3143200 2650100 5494 959 2829 3141 8973 8973 1680;1681;1682;1683 SPFNSPSPQDSPR 13 0 1 3 Phospho (STY) _SPFNS(ph)PS(ph)PQDS(ph)PR_ SPFNS(1)PS(1)PQDS(1)PR S(-59.38)PFNS(59.38)PS(82.7)PQDS(117.24)PR 0 0 3 0 Q6FI30;P08651;B7Z4T6 Q6FI30 Q6FI30 NFIC Nuclear factor 1;Nuclear factor 1 C-type MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 833.2852 2 828.280625 1654.5467 67563.55 0.62036 0.00051383 0.38098 0.00031556 1.0013 0.00082939 828.280932924076 833.285006500754 54.249 1.5888 54.249 53.528 55.117 -3.8147E-06 741 125 8 0 0 0 6.2628E-20 3 23055 130.64 112.26 4 0.8767 1.1061 0 68967000 35744000 33222000 5495 959 2829 3141 8974;8975;8976 8975 1680;1681;1682;1683 SPFNSPSPQDSPR 13 0 1 2 Phospho (STY) _SPFNS(ph)PSPQDS(ph)PR_ SPFNS(0.999)PS(0.002)PQDS(0.999)PR S(-36.89)PFNS(31.98)PS(-28.37)PQDS(28.37)PR 0 0 2 0 Q6FI30;P08651;B7Z4T6 Q6FI30 Q6FI30 NFIC Nuclear factor 1;Nuclear factor 1 C-type MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 793.3023 2 788.29746 1574.58037 69199.19 0.74989 0.00059114 0.57401 0.00045249 1.3239 0.0010436 788.29784236444 793.302291366054 55.023 1.2243 55.023 54.353 55.578 0 375 95 5 0 0 0 2.3693E-06 1 23371 91.657 73.061 6 0.70014 0.85097 0 20491000 10957000 9534100 5496 959 2829 3142 8977 8977 1680;1681;1682;1683 SPFNSPSPQDSPR 13 0 1 2 Phospho (STY) _SPFNS(ph)PS(ph)PQDSPR_ SPFNS(1)PS(0.99)PQDS(0.01)PR S(-59.47)PFNS(51.32)PS(19.86)PQDS(-19.86)PR 0 0 2 0 Q6FI30;P08651;B7Z4T6 Q6FI30 Q6FI30 NFIC Nuclear factor 1;Nuclear factor 1 C-type MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 793.8037 2 788.29746 1574.58037 68998.33 0.77746 0.00061287 -0.0096318 -7.5927E-06 0.76783 0.00060528 788.297194947306 793.301652035005 57.752 1.3428 57.752 57.049 58.392 -3.8147E-06 563 108 7 0 0 0 7.5487E-10 2 25490 101.3 82.06 6 0.92757 1.1667 0 44945000 22975000 21969000 5497 959 2829 3142 8978;8979 8979 1680;1681;1682;1683 SPFNSPSPQDSPR 13 0 1 Phospho (STY) _SPFNSPS(ph)PQDSPR_ SPFNS(0.002)PS(0.769)PQDS(0.23)PR S(-81.28)PFNS(-26.18)PS(5.25)PQDS(-5.25)PR 0 0 1 0 Q6FI30;P08651;B7Z4T6 Q6FI30 Q6FI30 NFIC Nuclear factor 1;Nuclear factor 1 C-type MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 753.3196 2 748.314295 1494.61404 70233.03 0.76702 0.00057397 0.1103 8.2537E-05 0.87732 0.00065651 748.31420946295 753.318200116814 59.275 1.0827 59.275 58.617 59.7 3.8147E-06 336 87 5 0 0 0 2.3942E-14 2 26449 114.69 91.315 4 0.49147 0.6046 0 24693000 15730000 8963800 5498 959 2829 3143 8980;8981 8981 1680;1681;1682;1683 SPFNSPSPQDSPR 13 0 1 Phospho (STY) _SPFNSPS(ph)PQDSPR_ SPFNS(0.052)PS(0.939)PQDS(0.009)PR S(-33.03)PFNS(-12.57)PS(12.57)PQDS(-20.19)PR 0 0 1 0 Q6FI30;P08651;B7Z4T6 Q6FI30 Q6FI30 NFIC Nuclear factor 1;Nuclear factor 1 C-type MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 753.3188 2 748.314295 1494.61404 71314.41 1.0626 0.00079518 -0.098034 -7.336E-05 0.96459 0.00072182 748.314474307252 753.318620762033 54.225 1.1629 54.225 53.551 54.714 0 411 99 7 0 0 0 0.0082535 1 32977 42.682 33.632 4 0.6946 0.55073 0 13321000 7764300 5556300 5499 959 2829 3143 8982 8982 1680;1681;1682;1683 SPFNSPSPQDSPR 13 0 1 Phospho (STY) _SPFNSPS(ph)PQDSPR_ S(0.001)PFNS(0.103)PS(0.665)PQDS(0.231)PR S(-30.81)PFNS(-8.1)PS(4.59)PQDS(-4.59)PR 0 0 1 0 Q6FI30;P08651;B7Z4T6 Q6FI30 Q6FI30 NFIC Nuclear factor 1;Nuclear factor 1 C-type ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 748.3168 2 748.314295 1494.61404 NaN NaN NaN -0.010735 -8.0333E-06 NaN NaN NaN NaN 51.055 1.474 51.055 50.389 51.863 0 0 0 0 0.0022902 1 30741 54.898 33.647 4 NaN NaN 0 6480500 6480500 0 5500 959 2829 3143 8983 8983 1680;1681;1682;1683 SPFPDVVPLQPEVSSYR 17 0 1 Phospho (STY) _S(ph)PFPDVVPLQPEVSSYR_ S(1)PFPDVVPLQPEVSSYR S(52.14)PFPDVVPLQPEVS(-52.14)S(-52.14)Y(-52.22)R 0 0 1 0 P31276 P31276 P31276 HOXC13 Homeobox protein Hox-C13 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 999.4783 2 998.974431 1995.93431 62084.14 0.7787 0.0007779 -0.15417 -0.00015401 0.62454 0.0006239 998.974974453714 1004.47692438982 127.82 0.40421 127.82 127.65 128.05 0 91 34 5 0 0 0 6.7307E-05 1 77522 55.173 44.892 4 0.30342 0.33695 0 8813400 6859100 1954300 5501 983 2830 3144 8984 8984 1740 SPFSMAASPK 10 1 0 Oxidation (M),Phospho (STY) _SPFSM(ox)AAS(ph)PK_ SPFSM(1)AASPK SPFS(0.07)MAAS(0.93)PK SPFSM(50.79)AASPK S(-46.27)PFS(-11.21)MAAS(11.21)PK 0 1 1 0 Q6ZU65 Q6ZU65 Q6ZU65 UBN2 Ubinuclein-2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 559.7335 2 559.733032 1117.45151 NaN NaN NaN 1.3026 0.00072911 NaN NaN NaN NaN 53.183 0.3758 53.183 52.918 53.294 -3.8147E-06 0 0 0 0.0099095 1 22231 50.786 24.774 3 NaN NaN 0 1893600 1893600 0 5502 1128 2831 3145 8985 8985 319 2151 SPGALETPSAAGSQGNTASQGK 22 1 0 Phospho (STY) _S(ph)PGALETPSAAGSQGNTASQGK_ S(0.999)PGALET(0.001)PSAAGSQGNTASQGK S(29.9)PGALET(-29.9)PS(-36.45)AAGS(-42.31)QGNT(-44.03)AS(-44.67)QGK 0 0 1 0 C9JVY5;A0A024R167;B4E2K2;A0A024R152;Q9Y2D5 C9JVY5 C9JVY5 AKAP2;hCG_28765 A-kinase anchor protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1052.9789 2 1048.46823 2094.92191 62653.27 0.31791 0.00033332 -0.06632 -6.9535E-05 0.25159 0.00026379 1048.96900733501 1052.47544220306 53.718 0.60981 53.718 53.336 53.945 0 148 50 4 0 0 0 2.8929E-06 1 22520 44.788 38.311 6 1.5935 1.8898 0 8291300 3326600 4964700 5503 38 2832 3146 8986 8986 46 SPGDFTSAAQLASTPFHK 18 1 0 Phospho (STY) _S(ph)PGDFTSAAQLASTPFHK_ S(1)PGDFTSAAQLASTPFHK S(64.99)PGDFT(-64.99)S(-88.79)AAQLAS(-164.63)T(-168.85)PFHK 0 0 1 0 O43683;A0JLU2 O43683 O43683 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 975.4482 2 971.440755 1940.86696 61570.07 0.61723 0.00059961 0.24532 0.00023831 0.86255 0.00083792 971.441566266472 975.447983717442 110.4 0.69182 110.4 110.17 110.86 0 269 59 7 0 0 0 2.4656E-87 2 65157 176.21 167.8 5 0.67373 0.85516 0 39848000 22982000 16865000 5504 926 2833 3147 8987;8988 8988 1557;1558;2844 SPGDFTSAAQLASTPFHK 18 1 0 Phospho (STY) _S(ph)PGDFTSAAQLASTPFHK_ S(0.85)PGDFT(0.126)S(0.023)AAQLASTPFHK S(8.28)PGDFT(-8.28)S(-15.59)AAQLAS(-35.75)T(-35.57)PFHK 0 0 1 0 O43683;A0JLU2 O43683 O43683 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 971.4422 2 971.440755 1940.86696 62163.32 0.81489 0.00079162 0.24398 0.00023701 1.0589 0.0010286 971.441225101252 975.448158115542 114.26 0.67227 114.26 113.94 114.61 -7.6294E-06 320 63 7 0 0 0 0.00062471 1 73553 40.552 36.161 5 0.82212 0.62002 0 18478000 10508000 7969700 5505 926 2833 3147 8989 8989 1557;1558;2844 SPGLLDTTPIR 11 0 1 Phospho (STY) _S(ph)PGLLDTTPIR_ S(1)PGLLDTTPIR S(48.56)PGLLDT(-48.56)T(-52.19)PIR 0 0 1 0 Q8IY92 Q8IY92 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 630.317 2 625.313035 1248.61152 NaN NaN NaN -0.15955 -9.9772E-05 NaN NaN NaN NaN 106.1 0.73339 106.1 105.73 106.47 -7.6294E-06 0 0 0 0.0097902 1 61447 54.343 40.085 3 NaN NaN 0 5674500 0 5674500 5506 1148 2834 3148 8990 8990 2205 SPGLYFLTAGDQGTLR 16 0 1 Phospho (STY) _S(ph)PGLYFLTAGDQGTLR_ S(1)PGLYFLTAGDQGTLR S(42.65)PGLY(-42.65)FLT(-62.79)AGDQGT(-76.79)LR 0 0 1 0 A0JLS5;J3KNP2;Q12788;A0A087WYP7 A0JLS5 A0JLS5 TBL3 Transducin beta-like protein 3 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 893.4272 2 888.421834 1774.82912 NaN NaN NaN 0.58767 0.0005221 NaN NaN NaN NaN 124.38 0.36238 124.38 124.21 124.58 0 0 0 0 1.8116E-07 1 75428 78.932 50.299 4 NaN NaN 0 2965000 0 2965000 5507 397 2835 3149 8991 8991 677 SPGVAAAVAEDGGLK 15 1 0 Phospho (STY) _S(ph)PGVAAAVAEDGGLK_ S(1)PGVAAAVAEDGGLK S(54.86)PGVAAAVAEDGGLK 0 0 1 0 E9PLH8;E9PM78;H0YD80;E9PLS2;E9PQV9;E9PM04;A0A024R3A2;Q9BTE7 E9PLH8 E9PLH8 DCUN1D5 DCN1-like protein;DCN1-like protein 5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 715.8461 2 711.337239 1420.65992 74009.34 0.6836 0.00048627 0.36476 0.00025947 1.0484 0.00074573 711.337466941784 715.344658568745 88.73 0.86258 88.73 88.374 89.237 0 164 78 4 0 0 0 0.0011324 2 48299 54.859 46.346 1 2.1324 2.5594 0 14984000 4317600 10666000 5508 75 2836 3150 8992;8993 8992 95 SPHIETYLK 9 1 0 Unmodified _SPHIETYLK_ 0 0 0 0 B4DPI9;H0YG10;Q5T0F3;Q13823 B4DPI9 B4DPI9 GNL2 Nucleolar GTP-binding protein 2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 548.3012 2 544.292756 1086.57096 NaN NaN NaN 2.3399 0.0012736 NaN NaN NaN NaN 103.03 0.20621 103.03 102.95 103.16 7.6294E-06 0 0 0 0.011101 1 59526 61.679 32.303 1 NaN NaN 0 2402400 0 2402400 5509 650 2837 3151 8994 8994 SPISVPGGSALISNLGK 17 1 0 Phospho (STY) _S(ph)PISVPGGSALISNLGK_ S(0.997)PIS(0.003)VPGGSALISNLGK S(24.55)PIS(-24.55)VPGGS(-75.51)ALIS(-82.23)NLGK 0 0 1 0 A6NEM2;P51610 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 838.9349 2 838.934577 1675.8546 66725.24 0.7412 0.00062182 -0.055679 -4.6711E-05 0.68552 0.0005751 838.934506288157 842.941578650216 122.15 0.85135 122.15 121.77 122.62 0 437 62 10 0 0 0 1.8913E-09 2 73633 85.469 80.47 4 0.66864 0.83035 0 100020000 59751000 40266000 5510 425 2838 3152 8995;8996 8996 736 SPISVPGGSALISNLGK 17 1 0 Phospho (STY) _S(ph)PISVPGGSALISNLGK_ S(0.991)PIS(0.009)VPGGSALISNLGK S(20.53)PIS(-20.53)VPGGS(-46.16)ALIS(-47.57)NLGK 0 0 1 0 A6NEM2;P51610 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 842.9427 2 838.934577 1675.8546 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.82 1 121.82 121.32 122.32 0 0 0 0 0.0013848 1 73598 48.177 27.224 4 5511 425 2838 3152 8997 8997 736 SPISVPGGSALISNLGK 17 1 0 Phospho (STY) _S(ph)PISVPGGSALISNLGK_ S(0.972)PIS(0.028)VPGGSALISNLGK S(15.36)PIS(-15.36)VPGGS(-39.91)ALIS(-44.48)NLGK 0 0 1 0 A6NEM2;P51610 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 842.9424 2 838.934577 1675.8546 66421.37 1.0242 0.00085924 0.057153 4.7948E-05 1.0814 0.00090719 838.934688663252 842.941703582443 131.44 0.86989 131.44 131.17 132.04 0 620 83 11 0 0 0 0.00027378 1 84697 45.084 31 4 1.4986 1.0009 0 118570000 45244000 73326000 5512 425 2838 3152 8998 8998 736 SPLAMSHASGVK 12 1 0 Oxidation (M),Phospho (STY) _S(ph)PLAM(ox)SHASGVK_ SPLAM(1)SHASGVK S(1)PLAMSHASGVK SPLAM(44.46)SHASGVK S(36.28)PLAMS(-36.28)HAS(-39.34)GVK 0 1 1 0 Q1ED39 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 640.7894 2 640.78887 1279.56319 74888.66 0.73942 0.00047381 -0.077122 -4.9419E-05 0.66229 0.00042439 640.788662279876 644.795920893293 21.342 0.39163 21.342 21.174 21.566 0 65 16 8 0 0 0 0.0099887 1 8135 44.457 16.174 3 1.5139 1.1792 0 14376000 6133800 8241900 5513 1082 2839 3153 8999 8999 311 2038 SPLAQDSPSQGSPALYR 17 0 1 Phospho (STY) _SPLAQDSPSQGS(ph)PALYR_ SPLAQDSPS(0.032)QGS(0.968)PALYR S(-132.47)PLAQDS(-36.83)PS(-14.86)QGS(14.86)PALY(-56.81)R 0 0 1 0 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 927.927 2 927.425105 1852.83566 64346.14 0.66431 0.0006161 0.19008 0.00017629 0.85439 0.00079238 927.425380157424 932.42950883256 78.462 0.78056 78.462 78.224 79.004 0 259 69 5 0 0 0 2.9521E-51 1 41044 149 128.95 5 0.53967 0.66711 0 33558000 22725000 10833000 5514 799 2840 3154 9000 9000 1375;1376 SPLAQDSPSQGSPALYR 17 0 1 Phospho (STY) _SPLAQDSPSQGS(ph)PALYR_ SPLAQDS(0.018)PS(0.098)QGS(0.884)PALYR S(-111.06)PLAQDS(-16.88)PS(-9.57)QGS(9.57)PALY(-49.51)R 0 0 1 0 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 927.9272 2 927.425105 1852.83566 63672.45 0.99498 0.00092277 -0.26156 -0.00024258 0.73341 0.00068019 927.424893320115 932.428959117734 80.605 1.0739 80.605 80.045 81.118 0 594 102 8 0 0 0 3.1887E-43 2 51501 141.13 125.6 5 1.9389 1.3125 0 70323000 22085000 48239000 5515 799 2840 3154 9001;9002 9002 1375;1376 SPLAQDSPSQGSPALYR 17 0 1 2 Phospho (STY) _SPLAQDS(ph)PSQGS(ph)PALYR_ SPLAQDS(0.984)PS(0.044)QGS(0.971)PALY(0.001)R S(-50)PLAQDS(17.83)PS(-15.32)QGS(15.32)PALY(-29.64)R 0 0 2 0 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 972.4095 2 967.40827 1932.80199 61898.36 0.31737 0.00030703 0.42209 0.00040833 0.73946 0.00071536 967.408259639664 972.412142764041 84.744 0.84431 84.744 84.324 85.169 0 335 75 7 0 0 0 1.6138E-09 2 45510 84.653 69.777 10 0.43723 0.55044 0 50855000 33262000 17594000 5516 799 2840 3155 9003;9004 9004 1375;1376 SPLAQDSPSQGSPALYR 17 0 1 2 Phospho (STY) _SPLAQDS(ph)PSQGS(ph)PALYR_ SPLAQDS(0.984)PS(0.097)QGS(0.916)PALY(0.003)R S(-47.98)PLAQDS(17.59)PS(-10.43)QGS(10.43)PALY(-24.91)R 0 0 2 0 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 967.9092 2 967.40827 1932.80199 62856.29 0.53621 0.00051873 0.040581 3.9258E-05 0.57679 0.00055799 967.407856282292 972.412463793765 92.924 1.0797 92.924 92.436 93.515 0 560 106 8 0 0 0 5.6749E-07 2 59856 78.078 64.651 10 2.021 1.3839 0 49017000 15769000 33249000 5517 799 2840 3155 9005;9006 9006 1375;1376 SPLDHRSPLER 11 0 2 2 Phospho (STY) _S(ph)PLDHRS(ph)PLER_ S(1)PLDHRS(1)PLER S(43.45)PLDHRS(43.45)PLER 0 0 2 1 O14647 O14647 O14647 CHD2 Chromodomain-helicase-DNA-binding protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 489.8789 3 489.544479 1465.61161 86423.06 0.22111 0.00010824 0.21108 0.00010333 0.43219 0.00021158 489.544557440283 496.216775486251 58.531 0.94501 58.531 57.998 58.943 0 450 75 9 0 0 0 0.0071274 1 25796 43.454 34.941 1 0.76156 0.94678 0 73287000 43315000 29972000 5518 920 2841 3156 9007 9007 1549;1550 SPLDHRSPLER 11 0 2 Phospho (STY) _SPLDHRS(ph)PLER_ SPLDHRS(1)PLER S(-59.86)PLDHRS(59.86)PLER 0 0 1 1 O14647 O14647 O14647 CHD2 Chromodomain-helicase-DNA-binding protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 469.5613 3 462.889036 1385.64528 88987.65 0.37528 0.00017371 -0.14148 -6.5491E-05 0.2338 0.00010822 462.888948700867 469.561094385273 28.03 1.1413 28.03 27.463 28.604 -1.9073E-06 286 76 7 0 0 0 0.0007261 1 13621 74.678 52.524 2 1.2553 1.0865 0 34282000 15007000 19275000 5519 920 2841 3157 9008 9008 1549;1550 SPLELEPEAK 10 1 0 Phospho (STY) _S(ph)PLELEPEAK_ S(1)PLELEPEAK S(58.17)PLELEPEAK 0 0 1 0 A0A087WTQ7;A0A087WV56;A0A087WW71;A0A087X0X5;Q92466 A0A087WTQ7 A0A087WTQ7 DDB2 DNA damage-binding protein 2 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 596.7787 2 596.778494 1191.54244 NaN NaN NaN 0.31491 0.00018793 NaN NaN NaN NaN 80.563 1.0437 80.563 79.946 80.989 -7.6294E-06 0 0 0 0.012116 1 51277 58.17 46.957 1 NaN NaN 0 7820200 7820200 0 5520 245 2842 3158 9009 9009 385 SPLHVGETR 9 0 1 Phospho (STY) _S(ph)PLHVGETR_ S(1)PLHVGETR S(49.65)PLHVGET(-49.65)R 0 0 1 0 B4DYZ9;A0A024R784;O15164 B4DYZ9 B4DYZ9 TRIM24 Transcription intermediary factor 1-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 538.2507 2 538.250238 1074.48592 82550.66 0.40489 0.00021793 0.16788 9.0362E-05 0.57277 0.00030829 538.250249474565 543.254515241382 57.915 1.1419 57.915 57.31 58.452 3.8147E-06 433 90 6 0 0 0 0.013395 1 25186 52.247 43.384 2 0.86478 1.089 0 52758000 28371000 24387000 5521 130 2843 3159 9010 9010 194 SPLKPESQLDLR 12 1 1 Phospho (STY) _S(ph)PLKPESQLDLR_ S(1)PLKPESQLDLR S(92.59)PLKPES(-92.59)QLDLR 0 0 1 1 G3V167;A8K214;Q9UGN5 G3V167 G3V167 PARP2 Poly [ADP-ribose] polymerase 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 731.869 2 731.868706 1461.72286 71850.22 0.64852 0.00047463 0.074614 5.4608E-05 0.72313 0.00052924 731.868666922325 740.879986819449 84.435 2.1698 84.435 83.203 85.372 0 927 201 7 0 0 0 7.586E-16 4 45210 120.87 120.87 2 0.71351 0.85284 0 107840000 66089000 41748000 5522 447 2844 3160 9011;9012;9013;9014 9012 778 SPLKPESQLDLR 12 1 1 Phospho (STY) _S(ph)PLKPESQLDLR_ S(1)PLKPESQLDLR S(36.2)PLKPES(-36.2)QLDLR 0 0 1 1 G3V167;A8K214;Q9UGN5 G3V167 G3V167 PARP2 Poly [ADP-ribose] polymerase 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 731.8696 2 731.868706 1461.72286 72006.37 1.1752 0.0008601 -0.13379 -9.7916E-05 1.0414 0.00076219 731.868692545831 740.879741315985 77.479 1.0491 77.479 77.041 78.09 0 482 98 7 0 0 0 0.0082668 1 49446 46.768 46.768 2 1.5309 1.1801 0 43929000 16844000 27085000 5523 447 2844 3160 9015 9015 778 SPLLAGGSPPQPVVPAHK 18 1 0 Phospho (STY) _SPLLAGGS(ph)PPQPVVPAHK_ S(0.017)PLLAGGS(0.983)PPQPVVPAHK S(-17.57)PLLAGGS(17.57)PPQPVVPAHK 0 0 1 0 C9JIY9;C9IYQ7;F8WCF5;F8WEL4;A8K0N6;A8K3Z5;Q8NFH5 C9JIY9 C9JIY9 NUP35 Nucleoporin NUP53 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 611.6538 3 611.320388 1830.93933 79482.18 0.5902 0.0003608 -0.1361 -8.3201E-05 0.4541 0.0002776 611.654684671601 614.325971693058 98.299 0.70551 98.299 97.919 98.625 0 172 58 5 0 0 0 0.00022569 1 55610 41.615 35.634 2 1.1363 1.4406 0 34830000 17300000 17531000 5524 440 2845 3161 9016 9016 764 SPLLAGGSPPQPVVPAHK 18 1 0 Phospho (STY) _SPLLAGGS(ph)PPQPVVPAHK_ S(0.017)PLLAGGS(0.983)PPQPVVPAHK S(-17.73)PLLAGGS(17.73)PPQPVVPAHK 0 0 1 0 C9JIY9;C9IYQ7;F8WCF5;F8WEL4;A8K0N6;A8K3Z5;Q8NFH5 C9JIY9 C9JIY9 NUP35 Nucleoporin NUP53 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 920.989 2 916.476944 1830.93933 NaN NaN NaN 0.91078 0.00083471 NaN NaN NaN NaN 98.14 0.34755 98.14 97.947 98.294 -7.6294E-06 0 0 0 0.0015215 1 55660 43.592 32.153 2 NaN NaN 0 6098800 0 6098800 5525 440 2845 3161 9017 9017 764 SPLLAGGSPPQPVVPAHK 18 1 0 Phospho (STY) _SPLLAGGS(ph)PPQPVVPAHK_ S(0.001)PLLAGGS(0.999)PPQPVVPAHK S(-30.7)PLLAGGS(30.7)PPQPVVPAHK 0 0 1 0 C9JIY9;C9IYQ7;F8WCF5;F8WEL4;A8K0N6;A8K3Z5;Q8NFH5 C9JIY9 C9JIY9 NUP35 Nucleoporin NUP53 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 611.3209 3 611.320388 1830.93933 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.074 1 98.074 97.574 98.574 0 0 0 0 0.00075181 1 55637 52.541 41.486 2 5526 440 2845 3161 9018 9018 764 SPLLAGGSPPQPVVPAHK 18 1 0 Phospho (STY) _SPLLAGGS(ph)PPQPVVPAHK_ S(0.001)PLLAGGS(0.999)PPQPVVPAHK S(-29.91)PLLAGGS(29.91)PPQPVVPAHK 0 0 1 0 C9JIY9;C9IYQ7;F8WCF5;F8WEL4;A8K0N6;A8K3Z5;Q8NFH5 C9JIY9 C9JIY9 NUP35 Nucleoporin NUP53 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 916.4775 2 916.476944 1830.93933 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.122 1 98.122 97.622 98.622 0 0 0 0 0.0002446 1 55675 60.489 54.996 2 5527 440 2845 3161 9019 9019 764 SPLLQEPTPK 10 1 0 Phospho (STY) _S(ph)PLLQEPTPK_ S(1)PLLQEPTPK S(66.98)PLLQEPT(-66.98)PK 0 0 1 0 Q15697;V9GZ69;Q8IZN5;I3L2H2 Q15697 Q15697 ZNF174 Zinc finger protein 174 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 595.2958 2 595.296854 1188.57916 NaN NaN NaN -0.22023 -0.0001311 NaN NaN NaN NaN 73.569 0.90597 73.569 73.264 74.17 0 0 0 0 1.1596E-09 2 37359 97.163 57.095 2 NaN NaN 0 23892000 23892000 0 5528 1072 2846 3162 9020;9021 9020 2026 SPLLQEPTPK 10 1 0 Phospho (STY) _S(ph)PLLQEPTPK_ S(1)PLLQEPTPK S(42.37)PLLQEPT(-42.37)PK 0 0 1 0 Q15697;V9GZ69;Q8IZN5;I3L2H2 Q15697 Q15697 ZNF174 Zinc finger protein 174 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 599.3043 2 595.296854 1188.57916 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.371 1 73.371 72.871 73.871 0 0 0 0 0.0091692 1 37371 48.091 28.314 2 5529 1072 2846 3162 9022 9022 2026 SPLLQEPTPK 10 1 0 Phospho (STY) _S(ph)PLLQEPTPK_ S(1)PLLQEPTPK S(64.13)PLLQEPT(-64.13)PK 0 0 1 0 Q15697;V9GZ69;Q8IZN5;I3L2H2 Q15697 Q15697 ZNF174 Zinc finger protein 174 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 599.3042 2 595.296854 1188.57916 79419.46 0.95617 0.00056921 0.1133 6.7447E-05 1.0695 0.00063665 595.296818732369 599.303957593113 73.017 1.2213 73.017 72.406 73.627 0 503 113 6 0 0 0 0.0019212 3 46515 73.951 68.47 2 1.0256 0.66965 0 32296000 16059000 16237000 5530 1072 2846 3162 9023;9024;9025 9024 2026 SPLQLGNEPLQR 12 0 1 Phospho (STY) _S(ph)PLQLGNEPLQR_ S(1)PLQLGNEPLQR S(55.45)PLQLGNEPLQR 0 0 1 0 E9PI60;A0A024RCX0;Q9ULD4;Q9NWM1;H0Y7I6;Q8TE92 E9PI60 E9PI60 BRPF3 Bromodomain and PHD finger-containing protein 3 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 716.3536 2 716.353223 1430.69189 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.941 1 89.941 89.441 90.441 -7.6294E-06 0 0 0 0.0010075 1 49386 55.452 19.715 1 5531 219 2847 3163 9026 9026 341 SPLQSVVVR 9 0 1 Phospho (STY) _S(ph)PLQSVVVR_ S(1)PLQSVVVR S(90.05)PLQS(-90.05)VVVR 0 0 1 0 Q9Y2W1;Q7Z5U1;Q05D20;Q6P0P7;Q6PJV4 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 532.7792 2 532.778631 1063.54271 82303.51 0.5983 0.00031876 -0.10594 -5.6444E-05 0.49236 0.00026232 532.778553523603 537.782622419027 81.585 2.2217 81.585 80.362 82.584 0 1051 208 7 0 0 0 8.0378E-21 4 43527 154.15 135.02 2 1.2613 1.597 0 477200000 206250000 270950000 5532 1248 2848 3164 9027;9028;9029;9030 9030 2572 SPLQSVVVR 9 0 1 Phospho (STY) _S(ph)PLQSVVVR_ S(1)PLQSVVVR S(60.01)PLQS(-60.01)VVVR 0 0 1 0 Q9Y2W1;Q7Z5U1;Q05D20;Q6P0P7;Q6PJV4 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 537.7828 2 532.778631 1063.54271 81753.13 0.86992 0.00046347 -0.23739 -0.00012647 0.63253 0.000337 532.77846753791 537.782588856911 82.291 1.1039 82.291 81.761 82.865 0 585 102 8 0 0 0 0.0007285 3 52992 78.342 64.346 2 1.7959 1.1922 0 185990000 69581000 116410000 5533 1248 2848 3164 9031;9032;9033 9032 2572 SPLTGYVR 8 0 1 Phospho (STY) _S(ph)PLTGYVR_ S(1)PLTGYVR S(41.21)PLT(-41.21)GY(-60.21)VR 0 0 1 0 H0YNS8;H0YKM5;Q9NP66 H0YNS8 H0YNS8 HMG20A High mobility group protein 20A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 486.7309 2 486.73115 971.447747 86674.36 0.17425 8.4814E-05 0.09371 4.5611E-05 0.26796 0.00013043 486.731108586284 491.735289450797 72.78 1.5394 72.78 71.944 73.483 0 553 131 6 0 0 0 0.010484 1 36566 63.216 28.392 3 0.6858 0.86632 0 131280000 79334000 51944000 5534 861 2849 3165 9034 9034 1467 SPLTGYVR 8 0 1 Phospho (STY) _S(ph)PLTGYVR_ S(0.998)PLT(0.002)GYVR S(28.13)PLT(-28.13)GY(-43.26)VR 0 0 1 0 H0YNS8;H0YKM5;Q9NP66 H0YNS8 H0YNS8 HMG20A High mobility group protein 20A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 486.7314 2 486.73115 971.447747 85526.54 0.66758 0.00032493 0.041329 2.0116E-05 0.70891 0.00034505 486.731061164782 491.73525439247 69.985 2.0339 69.985 68.814 70.847 0 781 176 6 0 0 0 0.02302 1 43929 48.698 15.507 3 0.85741 0.59894 0 36556000 19297000 17260000 5535 861 2849 3165 9035 9035 1467 SPLTQEQLIPNLAMK 15 1 0 Oxidation (M),Phospho (STY) _S(ph)PLTQEQLIPNLAM(ox)K_ SPLTQEQLIPNLAM(1)K S(0.997)PLT(0.003)QEQLIPNLAMK SPLTQEQLIPNLAM(82.1)K S(24.77)PLT(-24.77)QEQLIPNLAMK 0 1 1 0 Q9UNE7;H3BTA3 Q9UNE7 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 893.9504 2 889.941545 1777.86854 NaN NaN NaN -0.35887 -0.00031937 NaN NaN NaN NaN 115.94 0.54096 115.94 115.66 116.2 -7.6294E-06 0 0 0 1.7436E-05 1 69094 82.102 52.413 2 NaN NaN 0 11236000 0 11236000 5536 1241 2850 3166 9036 9036 358 2545 SPLYLVSR 8 0 1 Phospho (STY) _S(ph)PLYLVSR_ S(1)PLYLVSR S(49.16)PLY(-49.16)LVS(-74.68)R 0 0 1 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 507.7551 2 507.754625 1013.4947 86146.1 0.68272 0.00034666 0.31784 0.00016139 1.0006 0.00050804 507.754570889502 512.759001279334 90.1 1.4652 90.1 89.217 90.682 0 324 128 5 0 0 0 0.0061248 2 49576 77.379 55.915 3 0.6968 0.87623 0 43507000 24690000 18816000 5537 1170 2851 3167 9037;9038 9037 2296 SPLYLVSR 8 0 1 Phospho (STY) _S(ph)PLYLVSR_ S(1)PLYLVSR S(40.65)PLY(-40.65)LVS(-54.4)R 0 0 1 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 512.7594 2 507.754625 1013.4947 84780.01 0.67928 0.00034491 -0.055892 -2.838E-05 0.62338 0.00031653 507.75451164543 512.758647670904 91.497 1.3248 91.497 90.86 92.184 0 550 128 6 0 0 0 0.012502 2 58590 60.436 38.531 3 1.7537 1.2125 0 42502000 14750000 27752000 5538 1170 2851 3167 9039;9040 9039 2296 SPMSSLQISNEK 12 1 0 Oxidation (M),Phospho (STY) _SPM(ox)S(ph)SLQISNEK_ SPM(1)SSLQISNEK S(0.395)PMS(0.54)S(0.065)LQISNEK SPM(51.93)SSLQISNEK S(-1.36)PMS(1.36)S(-9.18)LQIS(-41.69)NEK 0 1 1 0 Q53F85;B2R7M0;A8K822;A0A024RCS3;B4E1C1;Q9UER7 Q53F85 Q53F85 DAXX Death domain-associated protein 6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 708.8066 2 708.807457 1415.60036 73187.32 0.85329 0.00060482 -0.048069 -3.4071E-05 0.80523 0.00057075 708.807206274409 712.814496138376 57.218 1.1643 57.218 56.642 57.806 0 217 97 4 0 0 0 0.0078734 1 25207 51.927 33.487 4 0.47322 0.56134 0 9608200 4741100 4867100 5539 215 2852 3168 9041 9041 52 335;336 SPMSTNSSVHTGSDVEQDAEK 21 1 0 Oxidation (M),Phospho (STY) _S(ph)PM(ox)STNSSVHTGSDVEQDAEK_ SPM(1)STNSSVHTGSDVEQDAEK S(0.957)PMS(0.031)T(0.007)NS(0.002)S(0.002)VHTGSDVEQDAEK SPM(47.92)STNSSVHTGSDVEQDAEK S(14.89)PMS(-14.89)T(-21.17)NS(-26.87)S(-26.87)VHT(-36)GS(-43.23)DVEQDAEK 0 1 1 0 A0A087WYS3;H7C4X9;A0A087WVZ6;Q9ULU4;A0A087WV57;A6H8Y8;Q5JV90 A0A087WYS3 A0A087WYS3 ZMYND8;DKFZp564P1772 Protein kinase C-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 768.3137 3 767.977415 2300.91041 68747.46 0.80591 0.00061892 -0.26791 -0.00020575 0.538 0.00041317 768.311775228201 770.648840416937 45.799 0.91119 45.799 45.245 46.156 0 413 65 10 0 0 0 1.011E-05 1 17142 47.919 36.916 7 0.80211 1.0107 0 29823000 16667000 13156000 5540 258 2853 3169 9042 9042 65 411 SPNELVDDLFK 11 1 0 Phospho (STY) _S(ph)PNELVDDLFK_ S(1)PNELVDDLFK S(40.07)PNELVDDLFK 0 0 1 0 F2Z2K0;Q53FF5;Q53FE8;Q9UNZ2 F2Z2K0 F2Z2K0 NSFL1C NSFL1 cofactor p47 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 682.8155 2 678.807783 1355.60101 NaN NaN NaN 0.30091 0.00020426 NaN NaN NaN NaN 129.54 0.51952 129.54 129.22 129.74 0 0 0 0 0.026557 1 78652 40.066 28.428 1 NaN NaN 0 2896400 0 2896400 5541 820 2854 3170 9043 9043 1414 SPNNEGDVHFSR 12 0 1 Phospho (STY) _S(ph)PNNEGDVHFSR_ S(1)PNNEGDVHFSR S(59.06)PNNEGDVHFS(-59.06)R 0 0 1 0 A0A1B0GV48;D6RBC4;Q8NAP3 A0A1B0GV48 A0A1B0GV48 ZBTB38 Zinc finger and BTB domain-containing protein 38 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 719.7914 2 719.790987 1437.56742 72601.87 0.80889 0.00058223 0.16306 0.00011737 0.97194 0.00069959 719.791139574888 724.794845138614 56.87 0.91487 56.87 56.358 57.273 0 300 78 6 0 0 0 0.0069552 2 24548 61.212 49.825 2 1.1535 1.4408 0 39015000 15809000 23206000 5542 386 2855 3171 9044;9045 9044 660 SPNNPFSR 8 0 1 Phospho (STY) _S(ph)PNNPFSR_ S(1)PNNPFSR S(83.25)PNNPFS(-83.25)R 0 0 1 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 504.7122 2 499.708206 997.401859 85703.7 0.50261 0.00025116 -0.036289 -1.8134E-05 0.46632 0.00023302 499.708137857094 504.712215887016 57.257 2.0142 57.257 56.285 58.3 -3.8147E-06 797 167 6 0 0 0 0.0032369 2 25027 96.342 73.271 2 0.65192 0.82216 0 64972000 37586000 27386000 5543 27 2856 3172 9046;9047 9047 33 SPNNPFSR 8 0 1 Phospho (STY) _S(ph)PNNPFSR_ S(1)PNNPFSR S(71.59)PNNPFS(-71.59)R 0 0 1 0 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 499.708 2 499.708206 997.401859 86605.45 0.34337 0.00017159 -0.050995 -2.5483E-05 0.29238 0.0001461 499.708147262079 504.712329051004 47.274 0.93632 47.274 46.766 47.703 0 240 64 5 0 0 0 0.0058975 2 28343 74.533 63.17 2 1.077 0.82184 0 18283000 8753100 9530100 5544 27 2856 3172 9048;9049 9049 33 SPPAPGLQPMR 11 0 1 Oxidation (M),Phospho (STY) _S(ph)PPAPGLQPM(ox)R_ SPPAPGLQPM(1)R S(1)PPAPGLQPMR SPPAPGLQPM(99.22)R S(99.22)PPAPGLQPMR 0 1 1 0 C9JCN8;P15408 C9JCN8 C9JCN8 FOSL2 Fos-related antigen 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 628.7917 2 623.786131 1245.55771 76727 0.83784 0.00052263 -0.15919 -9.9298E-05 0.67865 0.00042333 623.786045045066 628.790221903217 56.399 1.6387 56.399 55.442 57.081 0 792 136 8 0 0 0 3.2916E-06 4 24616 99.215 93.905 1 0.99789 1.2602 0 109170000 55033000 54133000 5545 739 2857 3173 9050;9051;9052;9053 9053 194 1246 SPPAPGLQPMR 11 0 1 Oxidation (M),Phospho (STY) _S(ph)PPAPGLQPM(ox)R_ SPPAPGLQPM(1)R S(1)PPAPGLQPMR SPPAPGLQPM(96.1)R S(96.1)PPAPGLQPMR 0 1 1 0 C9JCN8;P15408 C9JCN8 C9JCN8 FOSL2 Fos-related antigen 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 623.7866 2 623.786131 1245.55771 75600.74 0.88884 0.00055445 -0.0087226 -5.441E-06 0.88012 0.000549 623.78611023922 628.790263475182 49.27 1.4408 49.27 48.652 50.093 0 865 140 8 0 0 0 9.5077E-06 4 29857 96.103 88.824 1 0.72628 0.49091 0 75762000 45202000 30560000 5546 739 2857 3173 9054;9055;9056;9057 9056 194 1246 SPPAPPPYK 9 1 0 Phospho (STY) _S(ph)PPAPPPYK_ S(1)PPAPPPYK S(51.57)PPAPPPY(-51.57)K 0 0 1 0 Q9UMN6 Q9UMN6 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 517.2413 2 517.241351 1032.46815 84381.2 0.081109 4.1953E-05 -0.10864 -5.6191E-05 -0.027527 -1.4238E-05 517.24141639249 521.24853520534 52.274 1.1739 52.274 51.621 52.795 0 298 89 5 0 0 0 0.013362 1 21283 52.278 39.322 2 0.4799 0.56923 0 9318800 6541000 2777800 5547 1240 2858 3174 9058 9058 2542 SPPEGDTTLFLSR 13 0 1 2 Phospho (STY) _S(ph)PPEGDT(ph)TLFLSR_ S(1)PPEGDT(0.544)T(0.452)LFLS(0.004)R S(53.86)PPEGDT(0.81)T(-0.81)LFLS(-21.77)R 0 0 2 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 790.3248 2 790.325686 1578.63682 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.27 1 111.27 110.77 111.77 0 0 0 0 0.00014135 1 65819 62.861 44.997 6 5548 1195 2859 3175 9059 9059 2373;2981 SPPEGDTTLFLSR 13 0 1 Phospho (STY) _S(ph)PPEGDTTLFLSR_ S(1)PPEGDTTLFLSR S(59.28)PPEGDT(-59.28)T(-63.09)LFLS(-74.97)R 0 0 1 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 750.6643 2 750.342521 1498.67049 70843.09 0.90804 0.00068134 -0.11637 -8.7318E-05 0.79167 0.00059402 750.3422291997 755.346372776751 106.46 1.2191 106.46 105.87 107.09 0 550 91 8 0 0 0 0.0030009 1 61621 76.01 65.486 4 0.81719 1.0325 0 144910000 77774000 67140000 5549 1195 2859 3176 9060 9060 2373;2981 SPPEGDTTLFLSR 13 0 1 Phospho (STY) _S(ph)PPEGDTTLFLSR_ S(1)PPEGDTTLFLSR S(45.42)PPEGDT(-45.42)T(-48.42)LFLS(-51.91)R 0 0 1 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 755.3495 2 750.342521 1498.67049 71246.05 1.1279 0.00084632 0.088361 6.6301E-05 1.2163 0.00091262 750.342364054862 755.34667017708 112.03 1.4483 112.03 111.29 112.74 0 791 144 8 0 0 0 0.0052158 1 71738 53.491 41.325 4 1.913 1.2818 0 116950000 39354000 77594000 5550 1195 2859 3176 9061 9061 2373;2981 SPPEPEIINQVQQNELK 17 1 0 Phospho (STY) _S(ph)PPEPEIINQVQQNELK_ S(1)PPEPEIINQVQQNELK S(79.02)PPEPEIINQVQQNELK 0 0 1 0 Q9Y2H2 Q9Y2H2 Q9Y2H2 INPP5F Phosphatidylinositide phosphatase SAC2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1026.001 2 1021.99335 2041.97215 NaN NaN NaN 0.58099 0.00059377 NaN NaN NaN NaN 108.93 0.39781 108.93 108.77 109.17 -7.6294E-06 0 0 0 1.0266E-07 1 63869 79.022 57.789 1 NaN NaN 0 9782600 0 9782600 5551 1247 2860 3177 9062 9062 2563 SPPLPAVIR 9 0 1 Phospho (STY) _S(ph)PPLPAVIR_ S(1)PPLPAVIR S(72.59)PPLPAVIR 0 0 1 0 Q9Y6X9 Q9Y6X9 Q9Y6X9 MORC2 MORC family CW-type zinc finger protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 520.2845 2 515.278267 1028.54198 83906.66 0.38415 0.00019794 0.40672 0.00020957 0.79087 0.00040752 515.278613719342 520.282412413974 103.84 1.5022 103.84 103.16 104.66 0 617 110 8 0 0 0 0.0013464 2 59993 72.59 39.361 1 0.66616 0.84291 0 333250000 198560000 134690000 5552 1257 2861 3178 9063;9064 9064 2595 SPPLPAVIR 9 0 1 Phospho (STY) _S(ph)PPLPAVIR_ S(1)PPLPAVIR S(52.28)PPLPAVIR 0 0 1 0 Q9Y6X9 Q9Y6X9 Q9Y6X9 MORC2 MORC family CW-type zinc finger protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 520.2826 2 515.278267 1028.54198 84476.32 0.88457 0.0004558 -0.32406 -0.00016698 0.56051 0.00028882 515.27805560922 520.282117773081 107.86 1.5636 107.86 107.18 108.74 7.6294E-06 759 152 8 0 0 0 0.013362 2 69501 52.278 15.945 1 1.062 0.71894 0 70330000 32850000 37480000 5553 1257 2861 3178 9065;9066 9065 2595 SPPLSPVGTTPVK 13 1 0 2 Phospho (STY) _S(ph)PPLS(ph)PVGTTPVK_ S(1)PPLS(0.992)PVGT(0.006)T(0.001)PVK S(86.67)PPLS(21.88)PVGT(-21.88)T(-29.54)PVK 0 0 2 0 C9J4K0;Q9BVC5 C9J4K0 C9J4K0 C2orf49 Ashwin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 724.3409 2 720.332783 1438.65101 71391.8 0.84454 0.00060835 0.23417 0.00016868 1.0787 0.00077702 720.332990067522 724.340186333793 89.271 1.1747 89.271 88.766 89.94 0 421 103 5 0 0 0 1.0773E-06 2 48773 96.673 83.877 6 0.56 0.70668 0 47869000 28848000 19021000 5554 736 2862 3179 9067;9068 9068 1241;1242 SPPPELTDTATSTK 14 1 0 Phospho (STY) _S(ph)PPPELTDTATSTK_ S(1)PPPELTDTATSTK S(95.47)PPPELT(-95.47)DT(-117.94)AT(-131.27)S(-137.48)T(-144.01)K 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 766.8532 2 762.845094 1523.67563 70073.45 0.82217 0.00062719 -0.12033 -9.1794E-05 0.70184 0.00053539 762.845239601515 766.852046279388 63.487 3.5487 63.487 62.24 65.789 3.8147E-06 1873 274 10 0 0 0 8.1706E-51 7 29533 161.76 145.62 6 1.5791 1.9447 0 2196900000 851550000 1345300000 5555 994 2863 3180 9069;9070;9071;9072;9073;9074;9075 9069 1784 SPPPELTDTATSTK 14 1 0 Phospho (STY) _S(ph)PPPELTDTATSTK_ S(0.988)PPPELT(0.004)DT(0.005)AT(0.001)S(0.001)T(0.001)K S(22.99)PPPELT(-23.48)DT(-22.99)AT(-31.05)S(-31.05)T(-31.05)K 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 766.8523 2 762.845094 1523.67563 NaN NaN NaN -0.22877 -0.00017452 NaN NaN NaN NaN 56.154 1.4265 56.154 55.278 56.705 -3.8147E-06 0 0 0 0.0062174 1 23915 42.317 21.732 6 NaN NaN 0 10458000 0 10458000 5556 994 2863 3180 9076 9076 1784 SPPPELTDTATSTK 14 1 0 Phospho (STY) _S(ph)PPPELTDTATSTK_ S(0.999)PPPELTDTATSTK S(34.05)PPPELT(-34.05)DT(-37.06)AT(-37.06)S(-37.06)T(-37.06)K 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 766.8511 2 762.845094 1523.67563 NaN NaN NaN -0.48866 -0.00037277 NaN NaN NaN NaN 62.144 0.88403 62.144 61.546 62.43 0 0 0 0 0.007643 1 28978 40.025 20.42 6 NaN NaN 0 12477000 0 12477000 5557 994 2863 3180 9077 9077 1784 SPPPELTDTATSTK 14 1 0 Phospho (STY) _S(ph)PPPELTDTATSTK_ S(1)PPPELTDTATSTK S(42.63)PPPELT(-42.63)DT(-42.63)AT(-42.63)S(-42.63)T(-42.63)K 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 762.845 2 762.845094 1523.67563 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.25 1 62.25 61.75 62.75 0 0 0 0 0.0012029 1 29024 48.527 39.094 6 5558 994 2863 3180 9078 9078 1784 SPPPELTDTATSTK 14 1 0 Phospho (STY) _S(ph)PPPELTDTATSTK_ S(0.998)PPPELTDT(0.001)ATSTK S(32.26)PPPELT(-33.07)DT(-32.26)AT(-35.64)S(-40.59)T(-40.59)K 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 762.8451 2 762.845094 1523.67563 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.037 1 65.037 64.537 65.537 0 0 0 0 7.9186E-06 1 31168 76.391 51.599 6 5559 994 2863 3180 9079 9079 1784 SPPPELTDTATSTK 14 1 0 Phospho (STY) _S(ph)PPPELTDTATSTK_ S(1)PPPELTDTATSTK S(87.94)PPPELT(-87.94)DT(-100.73)AT(-111.99)S(-115.87)T(-119.15)K 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 762.8469 2 762.845094 1523.67563 69659.92 1.0538 0.0008039 -0.51478 -0.00039269 0.53904 0.0004112 762.845734262992 766.852075094924 60.964 4.585 60.964 58.903 63.488 -3.8147E-06 2526 430 11 0 0 0 1.9119E-27 2 37483 133.66 117.9 6 3.0773 2.0489 0 1718700000 428860000 1289800000 5560 994 2863 3180 9080;9081 9080 1784 SPPPELTDTATSTK 14 1 0 Phospho (STY) _S(ph)PPPELTDTATSTK_ S(0.949)PPPELT(0.009)DT(0.002)AT(0.017)S(0.017)T(0.006)K S(17.58)PPPELT(-20.18)DT(-26.21)AT(-17.58)S(-17.58)T(-21.76)K 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 766.8533 2 762.845094 1523.67563 NaN NaN NaN 0.25354 0.00019341 NaN NaN NaN NaN 43.68 2.6456 43.68 42.712 45.358 0 0 0 0 0.0023521 1 25888 48.532 21.991 6 NaN NaN 0 36832000 0 36832000 5561 994 2863 3180 9082 9082 1784 SPPPELTDTATSTKR 15 1 1 Phospho (STY) _S(ph)PPPELTDTATSTKR_ S(0.991)PPPELT(0.007)DT(0.001)ATSTKR S(21.46)PPPELT(-21.46)DT(-29.13)AT(-36.42)S(-42.96)T(-47.08)KR 0 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 566.9413 3 560.932858 1679.77675 NaN NaN NaN 0.17237 9.6689E-05 NaN NaN NaN NaN 45.623 2.1243 45.623 44.696 46.82 0 0 0 0 0.00039508 1 26985 51.348 37.617 6 NaN NaN 0 9980200 0 9980200 5562 994 2864 3181 9083 9083 1784 SPPPESMDTPTSTR 14 0 1 Oxidation (M),Phospho (STY) _S(ph)PPPESM(ox)DTPTSTR_ SPPPESM(1)DTPTSTR S(1)PPPESMDTPTSTR SPPPESM(95.98)DTPTSTR S(62.14)PPPES(-62.14)MDT(-85.85)PT(-89.15)S(-91.92)T(-91.92)R 0 1 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 804.8287 2 799.823835 1597.63312 66959.05 0.9313 0.00074487 -0.027639 -2.2106E-05 0.90366 0.00072277 799.82397708641 804.828160194502 35.355 2.1223 35.355 34.384 36.506 0 1465 199 11 0 0 0 3.6216E-08 3 11913 95.981 82.568 6 1.57 1.9456 0 34790000 13822000 20968000 5563 994 2865 3182 9084;9085;9086 9086 281 1777;2892 SPPPESMDTPTSTR 14 0 1 Oxidation (M),Phospho (STY) _S(ph)PPPESM(ox)DTPTSTR_ SPPPESM(1)DTPTSTR S(1)PPPESMDTPTSTR SPPPESM(55.21)DTPTSTR S(40.34)PPPES(-40.34)MDT(-51.27)PT(-53.36)S(-53.36)T(-53.36)R 0 1 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 799.8247 2 799.823835 1597.63312 67084.96 1.1392 0.00091114 -0.29461 -0.00023564 0.84457 0.00067551 799.823445412986 804.82792924168 25.557 1.4865 25.557 25.157 26.643 0 463 78 8 0 0 0 0.0024218 2 11706 55.213 42.079 6 3.3968 2.2961 0 75537000 17991000 57546000 5564 994 2865 3182 9087;9088 9088 281 1777;2892 SPPPESMDTPTSTR 14 0 1 Phospho (STY) _S(ph)PPPESMDTPTSTR_ S(0.999)PPPESMDTPTSTR S(33.61)PPPES(-33.61)MDT(-40.93)PT(-46.18)S(-46.18)T(-46.18)R 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 796.8318 2 791.826378 1581.6382 68981.13 0.97929 0.00077543 0.1211 9.5888E-05 1.1004 0.00087131 791.826567177827 796.830753390049 46.224 2.2512 46.224 45.225 47.476 0 927 209 7 0 0 0 0.0029999 2 27625 47.037 36.494 6 3.7905 2.6643 0 33358000 7249200 26109000 5565 994 2865 3183 9089;9090 9090 1777;2892 SPPPESVDTPTSTK 14 1 0 Phospho (STY) _S(ph)PPPESVDTPTSTK_ S(1)PPPESVDTPTSTK S(81.11)PPPES(-81.11)VDT(-108.57)PT(-128.51)S(-133.45)T(-138.11)K 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 761.838 2 761.837269 1521.65998 66209.2 0.94032 0.00071637 -0.60539 -0.00046121 0.33493 0.00025516 761.837264858329 765.844228187477 47.627 2.9648 47.627 46.394 49.359 0 1457 206 12 0 0 0 1.4673E-50 6 18735 157.86 140.84 6 1.4841 1.835 0 358060000 140340000 217720000 5566 994 2866 3184 9091;9092;9093;9094;9095;9096 9094 1778 SPPPESVDTPTSTK 14 1 0 Phospho (STY) _S(ph)PPPESVDTPTSTK_ S(1)PPPESVDTPTSTK S(90.1)PPPES(-90.1)VDT(-138.45)PT(-169.04)S(-174.88)T(-181.41)K 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 761.8388 2 761.837269 1521.65998 68897.67 1.1336 0.00086359 0.39236 0.00029891 1.5259 0.0011625 761.837599807036 765.844061779078 40.822 3.3864 40.822 39.351 42.737 0 1746 302 7 0 0 0 9.1086E-121 3 23736 208.18 189.51 6 3.5959 2.3994 0 465250000 99443000 365810000 5567 994 2866 3184 9097;9098;9099 9099 1778 SPPREGSQGELTPANSQSR 19 0 2 Phospho (STY) _SPPREGS(ph)QGELTPANSQSR_ S(0.444)PPREGS(0.556)QGELTPANSQSR S(-0.98)PPREGS(0.98)QGELT(-33.15)PANS(-49.26)QS(-49.27)R 0 0 1 1 J3QQX0;C9JFE4;A0A096LP07;A0A096LPJ3;A8K070;Q13098 J3QQX0 J3QQX0 GPS1 COP9 signalosome complex subunit 1 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 693.6496 3 693.314801 2076.92257 NaN NaN NaN 0.28451 0.00019725 NaN NaN NaN NaN 27.961 0.35265 27.961 27.768 28.121 0 0 0 0 1.2121E-05 1 13882 49.266 37.478 5 NaN NaN 0 9043200 9043200 0 5568 279 2867 3185 9100 9100 440 SPPSQSVQLNDSLSK 15 1 0 Phospho (STY) _S(ph)PPSQSVQLNDSLSK_ S(1)PPSQSVQLNDSLSK S(43.84)PPS(-43.84)QS(-115.99)VQLNDS(-227.4)LS(-236.75)K 0 0 1 0 B2R6H3;Q8NI77 B2R6H3 B2R6H3 KIF18A Kinesin-like protein;Kinesin-like protein KIF18A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 837.8954 2 833.887824 1665.7611 67053.49 0.78348 0.00065333 0.028202 2.3517E-05 0.81168 0.00067685 833.88777153291 837.894857602979 74.48 1.2662 74.48 73.85 75.117 0 614 110 8 0 0 0 1.1312E-232 5 38310 254.18 236.43 5 0.67205 0.83252 0 147310000 84634000 62676000 5569 533 2868 3186 9101;9102;9103;9104;9105 9105 896 SPPSQSVQLNDSLSK 15 1 0 Phospho (STY) _S(ph)PPSQSVQLNDSLSK_ S(0.997)PPS(0.003)QSVQLNDSLSK S(24.74)PPS(-24.74)QS(-62.51)VQLNDS(-110.91)LS(-115.31)K 0 0 1 0 B2R6H3;Q8NI77 B2R6H3 B2R6H3 KIF18A Kinesin-like protein;Kinesin-like protein KIF18A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 833.8889 2 833.887824 1665.7611 67167.82 1.127 0.00093978 0.24113 0.00020108 1.3681 0.0011409 833.887992030709 837.895017918785 76.322 1.1192 76.322 75.723 76.842 0 588 103 9 0 0 0 1.4258E-23 2 48606 123.02 110.45 5 1.3983 0.92617 0 70457000 29244000 41213000 5570 533 2868 3186 9106;9107 9107 896 SPPSVQSLAMR 11 0 1 Oxidation (M),Phospho (STY) _S(ph)PPSVQSLAM(ox)R_ SPPSVQSLAM(1)R S(1)PPSVQSLAMR SPPSVQSLAM(60.49)R S(37.77)PPS(-37.77)VQS(-57.23)LAMR 0 1 1 0 A0A0G2JIS2;A0A024RCN9;B7Z852;A2ABF8;A0A0G2JIR1;A2ABF9;A0A0G2JK64;Q96KQ7 A0A0G2JIS2 A0A0G2JIS2 EHMT2 Histone-lysine N-methyltransferase EHMT2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 634.7891 2 634.78887 1267.56319 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.014 1 75.014 74.514 75.514 0 0 0 0 0.0018597 1 38522 60.49 37.769 3 5571 213 2869 3187 9108 9108 50 332 SPPTQVAISSDSAR 14 0 1 Phospho (STY) _S(ph)PPTQVAISSDSAR_ S(0.991)PPT(0.009)QVAISSDSAR S(20.4)PPT(-20.4)QVAIS(-44.57)S(-44.57)DS(-46.63)AR 0 0 1 0 H0YM82;Q6ZUT6 H0YM82 H0YM82 C15orf52 Uncharacterized protein C15orf52 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 748.3735 2 748.343052 1494.67155 71628.02 0.7316 0.00054749 0.41228 0.00030853 1.1439 0.00085601 748.343245088665 753.347649480507 61.803 0.73077 61.803 61.472 62.203 3.8147E-06 141 46 4 0 0 0 0.0030042 1 28510 46.89 32.806 5 0.91215 1.0933 0 17396000 9056400 8340000 5572 864 2870 3188 9109 9109 1473 SPPTTMLLPASPAK 14 1 0 Oxidation (M),2 Phospho (STY) _S(ph)PPTTM(ox)LLPAS(ph)PAK_ SPPTTM(1)LLPASPAK S(1)PPTTMLLPAS(1)PAK SPPTTM(102.57)LLPASPAK S(40.61)PPT(-40.61)T(-52.59)MLLPAS(52.59)PAK 0 1 2 0 Q2M3X1;B4DSN8;Q9UGU5 Q2M3X1 Q2M3X1 HMGXB4 HMG domain-containing protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 797.8577 2 793.850483 1585.68641 67642.31 1.331 0.0010566 -0.14542 -0.00011544 1.1856 0.0009412 793.850188791586 797.857607889061 97.264 1.3839 97.264 96.711 98.095 0 562 114 7 0 0 0 5.05E-12 4 55269 102.57 95.203 6 1.2402 1.538 0 119720000 51564000 68159000 5573 657 2871 3189 9110;9111;9112;9113 9113 165 1093;1094 SPQDEGLHLLK 11 1 0 Phospho (STY) _S(ph)PQDEGLHLLK_ S(1)PQDEGLHLLK S(91.62)PQDEGLHLLK 0 0 1 0 Q7RTP6 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 662.8235 2 658.815942 1315.61733 74964.37 1.2125 0.00079883 0.10949 7.2133E-05 1.322 0.00087096 658.816124569359 662.822957502041 92.706 0.88995 92.706 92.289 93.179 7.6294E-06 197 77 4 0 0 0 2.1043E-05 2 51299 91.62 54.639 1 0.94324 1.1836 0 56980000 26643000 30336000 5574 1133 2872 3190 9114;9115 9115 2166 SPQDEGLHLLK 11 1 0 Phospho (STY) _S(ph)PQDEGLHLLK_ S(1)PQDEGLHLLK S(91.62)PQDEGLHLLK 0 0 1 0 Q7RTP6 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 662.8239 2 658.815942 1315.61733 NaN NaN NaN 0.13306 8.7665E-05 NaN NaN NaN NaN 82.848 0.92401 82.848 82.606 83.53 0 0 0 0 3.445E-06 1 53016 91.62 63.415 1 NaN NaN 0 17748000 0 17748000 5575 1133 2872 3190 9116 9116 2166 SPQGLGAFTPVVR 13 0 1 Phospho (STY) _SPQGLGAFT(ph)PVVR_ SPQGLGAFT(1)PVVR S(-44.32)PQGLGAFT(44.32)PVVR 0 0 1 0 D6W632;D6W633;G8JL96;Q9UM81;A0A0A0MR60;Q59FX6;Q13332 D6W632 D6W632 PTPRS;PTPsigma Protein-tyrosine-phosphatase;Receptor-type tyrosine-protein phosphatase S ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 704.8563 2 704.852859 1407.69117 NaN NaN NaN 4.2857 0.0030208 NaN NaN NaN NaN 79.199 0.32552 79.199 79.046 79.371 0 0 0 0 0.018492 1 50591 44.318 9.931 2 NaN NaN 0 3755900 3755900 0 5576 283 2873 3191 9117 9117 2679 SPQLSDFGLER 11 0 1 Phospho (STY) _S(ph)PQLSDFGLER_ S(1)PQLSDFGLER S(89.12)PQLS(-89.12)DFGLER 0 0 1 0 Q8IX90 Q8IX90 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 665.2991 2 664.797749 1327.58095 74352.27 1.0693 0.00071084 -0.096639 -6.4245E-05 0.97262 0.00064659 664.797662015435 669.801863387342 103.51 1.1028 103.51 102.95 104.06 0 345 78 6 0 0 0 1.1465E-10 2 59628 124.86 109.66 2 0.80344 0.99908 0 36582000 20494000 16088000 5577 1146 2874 3192 9118;9119 9119 2196 SPQLSLSPRPASPK 14 1 1 2 Phospho (STY) _SPQLSLS(ph)PRPAS(ph)PK_ SPQLS(0.029)LS(0.971)PRPAS(1)PK S(-59.04)PQLS(-15.31)LS(15.31)PRPAS(50.18)PK 0 0 2 1 B9EGQ5;M0QXA7;O95785 B9EGQ5 B9EGQ5 WIZ Protein Wiz MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 813.3801 2 812.87842 1623.74229 70849.8 0.85684 0.00069651 -0.0065791 -5.348E-06 0.85026 0.00069116 812.878153714571 821.889952677794 77.583 0.74433 77.583 77.31 78.054 0 168 67 4 0 0 0 6.3507E-07 1 40498 90.453 90.453 6 0.66414 0.75253 0 20958000 11962000 8995200 5578 731 2875 3193 9120 9120 1214;1215;1216 SPQLSLSPRPASPK 14 1 1 3 Phospho (STY) _S(ph)PQLSLS(ph)PRPAS(ph)PK_ S(1)PQLS(0.109)LS(0.892)PRPAS(0.999)PK S(37.87)PQLS(-9.15)LS(9.15)PRPAS(31.84)PK 0 0 3 1 B9EGQ5;M0QXA7;O95785 B9EGQ5 B9EGQ5 WIZ Protein Wiz MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 861.8741 2 852.861586 1703.70862 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.896 1 81.896 81.396 82.396 7.6294E-06 0 0 0 2.2247E-05 1 43672 60.938 34.503 4 5579 731 2875 3194 9121 9121 1214;1215;1216 SPQNQYPAELMR 12 0 1 Oxidation (M),Phospho (STY) _S(ph)PQNQYPAELM(ox)R_ SPQNQYPAELM(1)R S(1)PQNQYPAELMR SPQNQYPAELM(73.93)R S(57.96)PQNQY(-57.96)PAELMR 0 1 1 0 A0A0S2Z441;B4DDF5;C6EMX8;B2RBA6;A0A0S2Z4A5;P33993;C9J8M6;B3KUD7 A0A0S2Z441 A0A0S2Z441 MCM7 DNA helicase;DNA replication licensing factor MCM7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 770.3306 2 765.326348 1528.63814 70061.65 0.72165 0.00055229 0.047329 3.6222E-05 0.76897 0.00058852 765.32657787546 770.330245817813 65.056 0.96915 65.056 64.357 65.326 0 211 71 6 0 0 0 0.0014931 2 31240 73.927 55.289 2 2.181 2.6813 0 28331000 11390000 16941000 5580 348 2876 3195 9122;9123 9123 82 546 SPQPDPVDTPASTK 14 1 0 Phospho (STY) _S(ph)PQPDPVDTPASTK_ S(1)PQPDPVDTPASTK S(81.44)PQPDPVDT(-81.44)PAS(-93.27)T(-92.78)K 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 760.3381 2 760.337436 1518.66032 69660.88 0.57562 0.00043767 0.12572 9.5586E-05 0.70134 0.00053325 760.337719927562 764.344498815684 51.84 1.9851 51.84 51.018 53.003 0 1086 157 10 0 0 0 6.3101E-12 4 21322 104.55 92.911 4 1.1366 1.4056 0 323390000 149740000 173650000 5581 994 2877 3196 9124;9125;9126;9127 9124 1779 SPQPDPVDTPASTK 14 1 0 Phospho (STY) _S(ph)PQPDPVDTPASTK_ S(1)PQPDPVDTPASTK S(96.83)PQPDPVDT(-96.83)PAS(-110.9)T(-111.66)K 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 764.3461 2 760.337436 1518.66032 68633.43 0.91937 0.00069903 0.45231 0.00034391 1.3717 0.0010429 760.337730624351 764.344744991585 45.748 2.1758 45.748 44.624 46.8 0 1246 199 11 0 0 0 4.3883E-23 2 27473 122.13 101.43 4 2.3104 1.5422 0 375270000 114850000 260430000 5582 994 2877 3196 9128;9129 9129 1779 SPQPDPVGTPTIFK 14 1 0 Phospho (STY) _S(ph)PQPDPVGTPTIFK_ S(1)PQPDPVGTPTIFK S(83.31)PQPDPVGT(-83.31)PT(-103.15)IFK 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 786.3842 2 782.376364 1562.73817 69032.05 1.0074 0.00078819 0.096378 7.5404E-05 1.1038 0.0008636 782.376521093243 786.383504254561 108.09 1.2723 108.09 107.52 108.79 7.6294E-06 613 97 10 0 0 0 3.2862E-41 3 63006 153.23 137.6 3 1.41 1.7434 0 348280000 143930000 204350000 5583 994 2878 3197 9130;9131;9132 9131 1780 SPQPDPVGTPTIFK 14 1 0 Phospho (STY) _S(ph)PQPDPVGTPTIFK_ S(1)PQPDPVGTPTIFK S(35.4)PQPDPVGT(-35.4)PT(-39.54)IFK 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 786.3853 2 782.376364 1562.73817 69606.42 1.2067 0.0009441 0.55153 0.00043151 1.7582 0.0013756 782.878556628136 786.383891295298 114.2 0.98271 114.2 113.75 114.73 -7.6294E-06 502 92 7 0 0 0 0.0029481 2 73381 48.823 45.722 3 3.2486 2.1233 0 47319000 11745000 35573000 5584 994 2878 3197 9133;9134 9133 1780 SPQPDPVGTPTIFKPQSK 18 2 0 Phospho (STY) _S(ph)PQPDPVGTPTIFKPQSK_ S(1)PQPDPVGTPTIFKPQSK S(50.08)PQPDPVGT(-50.08)PT(-63.23)IFKPQS(-76.46)K 0 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 674.0091 3 668.666112 2002.97651 73983.25 0.67208 0.0004494 -0.27694 -0.00018518 0.39514 0.00026422 669.000225648936 674.008717074737 98.649 1.3792 98.649 98.072 99.451 0 754 116 9 0 0 0 2.7834E-08 3 56378 77.641 74.037 4 1.4355 1.8599 0 151450000 59584000 91870000 5585 994 2879 3198 9135;9136;9137 9137 1780 SPQPDPVGTPTIFKPQSK 18 2 0 Phospho (STY) _S(ph)PQPDPVGTPTIFKPQSK_ S(0.999)PQPDPVGTPTIFKPQSK S(35.04)PQPDPVGT(-35.44)PT(-35.04)IFKPQS(-44.03)K 0 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1002.9954 2 1002.49553 2002.97651 61574.26 0.24802 0.00024864 -0.36066 -0.00036156 -0.11264 -0.00011292 1002.49503216034 1010.50947438921 98.566 1.163 98.566 98.158 99.321 0 602 98 8 0 0 0 0.00013822 1 56440 44.998 39.392 4 1.508 1.9328 0 102870000 41553000 61321000 5586 994 2879 3198 9138 9138 1780 SPQPDPVGTPTIFKPQSK 18 2 0 Phospho (STY) _S(ph)PQPDPVGTPTIFKPQSK_ S(1)PQPDPVGTPTIFKPQSK S(59.5)PQPDPVGT(-59.5)PT(-72.43)IFKPQS(-96.86)K 0 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 674.0094 3 668.666112 2002.97651 73855.23 0.93194 0.00062315 0.061838 4.1349E-05 0.99377 0.0006645 669.000553775297 674.008903842701 96.525 1.3446 96.525 95.99 97.335 0 804 132 9 0 0 0 1.1201E-17 2 62298 103.02 95.4 4 3.2396 2.4318 0 77356000 18932000 58423000 5587 994 2879 3198 9139;9140 9140 1780 SPQPDPVGTPTIFKPQSK 18 2 0 Phospho (STY) _S(ph)PQPDPVGTPTIFKPQSK_ S(1)PQPDPVGTPTIFKPQSK S(60.89)PQPDPVGT(-60.89)PT(-65.95)IFKPQS(-74.11)K 0 0 1 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-SECPEP 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1002.7924 2 1002.49553 2002.97651 61315.02 0.21987 0.00022041 0.70468 0.00070644 0.92454 0.00092685 1002.99780827074 1011.01194880171 96.482 1.1854 96.482 96.041 97.227 0 738 116 9 0 0 0 4.6384E-06 1 62148 75.239 75.239 4 3.432 2.5715 0 88659000 20139000 68520000 5588 994 2879 3198 9141 9141 1780 SPQPESFK 8 1 0 Phospho (STY) _S(ph)PQPESFK_ S(1)PQPESFK S(54.91)PQPES(-54.91)FK 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 500.2131 2 500.21279 998.411027 86741.08 0.54297 0.0002716 -0.12605 -6.305E-05 0.41693 0.00020855 500.212603748005 504.219779790258 43.385 1.3366 43.385 42.653 43.99 3.8147E-06 422 95 6 0 0 0 0.0058458 2 15824 73.885 45.158 2 1.131 1.3462 0 11995000 5695500 6299000 5589 994 2880 3199 9142;9143 9143 1786 SPQPPVEEEDEHFDDTVVCLDTYNCDLHFK 30 1 0 Unmodified _SPQPPVEEEDEHFDDTVVCLDTYNCDLHFK_ 0 0 0 0 Q96BA7;B3KX72;Q00839;B4DLR3;Q5RI18 Q96BA7 Q96BA7 HNRNPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 912.1517 4 909.644887 3634.55044 62662.1 0.5652 0.00051413 -0.52219 -0.00047501 0.043008 3.9122E-05 909.895468076215 911.899272875535 133.15 0.24362 133.15 133.04 133.28 0 195 19 15 0 0 0 3.5729E-49 2 80999 108.5 97.635 1 1.0778 1.3498 0 61054000 29732000 31322000 5590 610 2881 3200 9144;9145 9145 SPQPPVEEEDEHFDDTVVCLDTYNCDLHFK 30 1 0 Unmodified _SPQPPVEEEDEHFDDTVVCLDTYNCDLHFK_ 0 0 0 0 Q96BA7;B3KX72;Q00839;B4DLR3;Q5RI18 Q96BA7 Q96BA7 HNRNPU Heterogeneous nuclear ribonucleoprotein U MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 909.8962 4 909.644887 3634.55044 62931.14 1.1821 0.0010753 0.12743 0.00011592 1.3095 0.0011912 910.146520244939 912.149699259199 118.38 0.37849 118.38 118.21 118.59 -7.6294E-06 221 33 10 0 0 0 0.018012 1 76270 13.663 13.663 1 0.7542 0.56743 0 18597000 11668000 6928500 5591 610 2881 3200 9146 9146 SPQPSVPEQSDNELEQAGK 19 1 0 Phospho (STY) _S(ph)PQPSVPEQSDNELEQAGK_ S(0.976)PQPS(0.024)VPEQSDNELEQAGK S(16.08)PQPS(-16.08)VPEQS(-34.04)DNELEQAGK 0 0 1 0 A0A024RC19;Q5FWF5 A0A024RC19 A0A024RC19 ESCO1 N-acetyltransferase ESCO1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1060.9618 2 1060.46261 2118.91067 60379.68 0.21101 0.00022377 0.13617 0.0001444 0.34718 0.00036817 1060.46284008673 1064.97100328623 69.63 0.77106 69.63 69.193 69.964 0 274 75 6 0 0 0 0.00017131 1 34888 43.794 28.159 3 0.84818 1.0651 0 28174000 14990000 13184000 5592 206 2882 3201 9147 9147 319 SPQQSAALPR 10 0 1 Phospho (STY) _S(ph)PQQSAALPR_ S(1)PQQSAALPR S(91.1)PQQS(-91.1)AALPR 0 0 1 0 A0A0A6YYG7;Q6IBW4;E5RJN3 A0A0A6YYG7 A0A0A6YYG7 NCAPH2 Condensin-2 complex subunit H2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 567.7684 2 567.768795 1133.52304 81373.39 0.66004 0.00037475 -0.019436 -1.1035E-05 0.64061 0.00036372 567.768633433377 572.772983123575 48.56 0.91403 48.56 48.044 48.958 0 279 60 6 0 0 0 2.9022E-10 2 18951 131.83 114.91 2 0.80108 0.94575 0 14103000 8030400 6072500 5593 301 2883 3202 9148;9149 9149 481 SPQQTVPYVVPLSPK 15 1 0 Phospho (STY) _S(ph)PQQTVPYVVPLSPK_ S(1)PQQTVPYVVPLSPK S(35.71)PQQT(-35.71)VPY(-49.77)VVPLS(-54.55)PK 0 0 1 0 H0Y6S1;B4DRC2;B4DZR9;Q9UQR0 H0Y6S1 H0Y6S1 SCML2 Sex comb on midleg-like protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 860.4405 2 860.439496 1718.86444 68494.92 0.66163 0.0005693 -0.062744 -5.3987E-05 0.59889 0.00051531 860.439607715225 864.94810695443 115.05 0.45882 115.05 114.81 115.27 0 156 37 6 0 0 0 0.0010862 1 68536 58.079 53.364 4 0.89256 1.072 0 15250000 8972800 6277600 5594 654 2884 3203 9150 9150 1086;1087 SPQQTVPYVVPLSPK 15 1 0 2 Phospho (STY) _S(ph)PQQTVPYVVPLS(ph)PK_ S(0.983)PQQT(0.017)VPY(0.009)VVPLS(0.991)PK S(17.6)PQQT(-17.6)VPY(-20.32)VVPLS(20.32)PK 0 0 2 0 H0Y6S1;B4DRC2;B4DZR9;Q9UQR0 H0Y6S1 H0Y6S1 SCML2 Sex comb on midleg-like protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 904.4327 2 900.422661 1798.83077 63765.8 0.78642 0.00070811 -0.45716 -0.00041164 0.32926 0.00029648 900.422679846218 904.429882289934 120.77 0.84323 120.77 120.33 121.18 7.6294E-06 327 68 8 0 0 0 0.00083624 1 72622 56.215 56.215 6 0.55982 0.7087 0 43650000 27282000 16369000 5595 654 2884 3204 9151 9151 1086;1087 SPQSNSPVLLSR 12 0 1 Phospho (STY) _S(ph)PQSNSPVLLSR_ S(0.967)PQS(0.032)NS(0.001)PVLLSR S(14.83)PQS(-14.83)NS(-31.6)PVLLS(-40.15)R 0 0 1 0 D6RAZ3;D6R9T3;Q96FZ2;D6RAI0;D6RGK7;E7EMP6;B4DMK2 D6RAZ3 D6RAZ3 HMCES Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 682.8322 2 682.832124 1363.64969 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.464 1 77.464 76.964 77.964 7.6294E-06 0 0 0 0.016406 1 40385 40.552 25.401 4 5596 773 2885 3205 9152 9152 1309 SPQVPAAQQMLNFPEK 16 1 0 Oxidation (M),Phospho (STY) _S(ph)PQVPAAQQM(ox)LNFPEK_ SPQVPAAQQM(1)LNFPEK S(1)PQVPAAQQMLNFPEK SPQVPAAQQM(77.13)LNFPEK S(77.13)PQVPAAQQMLNFPEK 0 1 1 0 Q58EY4;Q92922;Q05BW5;Q05CR1;B4DYQ1;B4DYF9 Q58EY4 Q58EY4 SMARCC1 SWI/SNF complex subunit SMARCC1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 940.9352 2 940.934251 1879.85395 61727.22 1.133 0.0010661 0.95195 0.00089572 2.0849 0.0019618 941.436680695411 944.941728470699 93.438 0.84111 93.438 93.044 93.885 7.6294E-06 436 68 9 0 0 0 1.614E-06 2 52143 77.13 59.464 1 0.69464 0.86028 0 167250000 102190000 65055000 5597 1092 2886 3206 9153;9154 9154 312 2058 SPRPASPASNVVVLPSGSTVYVK 23 1 1 2 Phospho (STY) _S(ph)PRPAS(ph)PASNVVVLPSGSTVYVK_ S(0.841)PRPAS(0.579)PAS(0.579)NVVVLPSGSTVYVK S(4.22)PRPAS(0)PAS(0)NVVVLPS(-40.47)GS(-40.46)T(-40.46)VY(-43.48)VK 0 0 2 1 E9PMC9;B3KWI5;Q7Z589 E9PMC9 E9PMC9 C11orf30;EMSY Protein EMSY MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 831.0768 3 824.736029 2471.18626 69961.01 0.97781 0.00080644 -0.43178 -0.00035611 0.54603 0.00045033 824.735198345247 830.742786372092 112.34 0.41827 112.34 112.14 112.56 -7.6294E-06 126 37 5 0 0 0 7.0359E-07 1 66575 44.541 39.414 21 0.49106 0.56653 0 26500000 16601000 9899400 5598 607 2887 3207 9155 9155 1001;1002;1003 SPRSPQLSDFGLER 14 0 2 2 Phospho (STY) _S(ph)PRS(ph)PQLSDFGLER_ S(1)PRS(0.997)PQLS(0.003)DFGLER S(60.27)PRS(24.81)PQLS(-24.81)DFGLER 0 0 2 1 Q8IX90 Q8IX90 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 874.8738 2 874.873866 1747.73318 65279.65 1.3109 0.0011469 -0.58123 -0.0005085 0.72966 0.00063836 874.873354533635 884.881894888411 102.64 1.0546 102.64 102.15 103.21 -7.6294E-06 290 74 6 0 0 0 2.6407E-05 1 58992 80.361 80.361 3 0.46609 0.56734 0 19652000 13014000 6638600 5599 1146 2888 3208 9156 9156 2196;2197 SPSAIPEQNHSLNDQAK 17 1 0 Phospho (STY) _S(ph)PSAIPEQNHSLNDQAK_ S(0.556)PS(0.444)AIPEQNHSLNDQAK S(0.98)PS(-0.98)AIPEQNHS(-63.23)LNDQAK 0 0 1 0 Q59GL0;Q13129 Q59GL0 Q59GL0 RLF Zinc finger protein Rlf MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 639.29 3 639.289705 1914.84728 75382.78 0.69306 0.00044307 -0.081918 -5.237E-05 0.61114 0.0003907 639.289735603129 642.295326012714 58.376 0.98254 58.376 57.973 58.956 0 429 78 9 0 0 0 6.5384E-07 1 25707 74.324 74.324 3 0.5577 0.69909 0 59090000 39113000 19977000 5600 1048 2889 3209 9157 9157 1956 SPSAIPEQNHSLNDQAK 17 1 0 Phospho (STY) _S(ph)PSAIPEQNHSLNDQAK_ S(0.936)PS(0.064)AIPEQNHSLNDQAK S(11.64)PS(-11.64)AIPEQNHS(-65.77)LNDQAK 0 0 1 0 Q59GL0;Q13129 Q59GL0 Q59GL0 RLF Zinc finger protein Rlf MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 962.4378 2 958.430919 1914.84728 63074.73 0.42279 0.00040522 0.15449 0.00014806 0.57728 0.00055328 958.431014396826 962.438017986801 58.41 0.71941 58.41 58.069 58.788 -3.8147E-06 290 56 6 0 0 0 1.8428E-05 2 25843 69.431 63.682 3 0.62383 0.79057 0 33211000 21809000 11402000 5601 1048 2889 3209 9158;9159 9159 1956 SPSDLHISPLAK 12 1 0 2 Phospho (STY) _S(ph)PSDLHIS(ph)PLAK_ S(1)PSDLHIS(1)PLAK S(40.1)PS(-40.1)DLHIS(119.35)PLAK 0 0 2 0 B9EGQ5;M0QXA7;O95785;B3KR89 B9EGQ5 B9EGQ5 WIZ Protein Wiz MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 712.8156 2 712.814758 1423.61496 72210.41 1.2839 0.00091519 0.47813 0.00034082 1.762 0.001256 712.815087593966 716.822124857797 96.816 1.4698 96.816 96.157 97.626 0 705 123 9 0 0 0 1.4954E-79 3 54921 190.44 153.26 3 0.5832 0.72086 0 407110000 260960000 146150000 5602 731 2890 3210 9160;9161;9162 9161 1217;1218 SPSDLHISPLAK 12 1 0 2 Phospho (STY) _S(ph)PSDLHIS(ph)PLAK_ S(0.957)PS(0.043)DLHIS(1)PLAK S(13.51)PS(-13.51)DLHIS(73.85)PLAK 0 0 2 0 B9EGQ5;M0QXA7;O95785;B3KR89 B9EGQ5 B9EGQ5 WIZ Protein Wiz MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 716.8224 2 712.814758 1423.61496 71349.75 1.082 0.00077125 -0.0075706 -5.3965E-06 1.0744 0.00076586 712.814880489516 716.821877461825 101.66 1.3144 101.66 100.99 102.31 7.6294E-06 862 122 10 0 0 0 2.2874E-09 2 65563 101.52 82.946 3 1.6531 1.101 0 99117000 38044000 61073000 5603 731 2890 3210 9163;9164 9163 1217;1218 SPSDLHISPLAK 12 1 0 Phospho (STY) _S(ph)PSDLHISPLAK_ S(0.98)PS(0.02)DLHISPLAK S(16.86)PS(-16.86)DLHIS(-75.99)PLAK 0 0 1 0 B9EGQ5;M0QXA7;O95785;B3KR89 B9EGQ5 B9EGQ5 WIZ Protein Wiz MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 672.8333 2 672.831592 1343.64863 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.895 1 90.895 90.395 91.395 0 0 0 0 8.4976E-14 1 50095 136.24 101.98 3 5604 731 2890 3211 9165 9165 1217;1218 SPSDSSTASTPVAEQIER 18 0 1 Phospho (STY) _S(ph)PSDSSTASTPVAEQIER_ S(0.546)PS(0.453)DS(0.001)STASTPVAEQIER S(0.81)PS(-0.81)DS(-26.8)S(-41.82)T(-48.62)AS(-61.36)T(-66.56)PVAEQIER 0 0 1 0 B3KSQ7;Q16643;B7Z2Z0;D6R9Q9 B3KSQ7 B3KSQ7 DBN1 Drebrin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 971.9274 2 971.425499 1940.83645 62417.09 0.4507 0.00043782 0.35076 0.00034073 0.80146 0.00077856 971.927640890271 976.430296426652 73.004 0.96268 73.004 72.673 73.636 0 272 83 6 0 0 0 1.5916E-10 1 37064 85.636 71.973 7 1.0814 1.3436 0 36153000 15709000 20444000 5605 598 2891 3212 9166 9166 982;983;984;985;2779 SPSEDPLTR 9 0 1 Phospho (STY) _S(ph)PSEDPLTR_ S(0.965)PS(0.035)EDPLTR S(14.45)PS(-14.45)EDPLT(-46.35)R 0 0 1 0 Q53G50;B2R8F3;O15479 Q53G50 Q53G50 MAGEB2 Melanoma-associated antigen B2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 546.2361 2 541.231711 1080.44887 NaN NaN NaN 0.25352 0.00013721 NaN NaN NaN NaN 54.031 0.91336 54.031 53.44 54.353 0 0 0 0 0.011032 2 22844 53.237 26.451 3 NaN NaN 0 4502500 0 4502500 5606 541 2892 3213 9167;9168 9168 899 SPSEPAHPEATTPGK 15 1 0 Phospho (STY) _S(ph)PSEPAHPEATTPGK_ S(0.985)PS(0.015)EPAHPEATTPGK S(18.14)PS(-18.14)EPAHPEAT(-82.65)T(-88.27)PGK 0 0 1 0 M0QXK5;M0R044;M0R0F2;W4VSR2;M0R189;Q8N594 M0QXK5 M0QXK5 MPND MPN domain-containing protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 793.3495 2 793.348335 1584.68212 68859.86 0.92534 0.00073412 0.21888 0.00017365 1.1442 0.00090777 793.348830545588 797.355432983933 42.905 0.90365 42.905 42.383 43.287 0 287 64 7 0 0 0 2.3183E-18 1 15426 117.08 96.082 4 0.36739 0.43586 0 10578000 7973100 2604800 5607 908 2893 3214 9169 9169 1534 SPSEPAHPEATTPGK 15 1 0 Phospho (STY) _S(ph)PSEPAHPEATTPGK_ S(0.951)PS(0.049)EPAHPEATTPGK S(12.84)PS(-12.84)EPAHPEAT(-46.94)T(-50.69)PGK 0 0 1 0 M0QXK5;M0R044;M0R0F2;W4VSR2;M0R189;Q8N594 M0QXK5 M0QXK5 MPND MPN domain-containing protein ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 793.3492 2 793.348335 1584.68212 NaN NaN NaN 0.96258 0.00076366 NaN NaN NaN NaN 22.2 0.41249 22.2 22.006 22.418 0 0 0 0 8.9909E-05 1 8799 59.728 48.254 4 NaN NaN 0 18016000 18016000 0 5608 908 2893 3214 9170 9170 1534 SPSEPLIPK 9 1 0 Phospho (STY) _S(ph)PSEPLIPK_ S(0.721)PS(0.279)EPLIPK S(4.12)PS(-4.12)EPLIPK 0 0 1 0 B2R935;A0A024R1S2;Q99741 B2R935 B2R935 CDC6 Cell division control protein 6 homolog ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 524.2601 2 524.25974 1046.50493 NaN NaN NaN 0.27755 0.00014551 NaN NaN NaN NaN 80.193 1.1232 80.193 79.582 80.705 0 0 0 0 0.010923 2 42588 53.597 36.67 2 NaN NaN 0 20150000 20150000 0 5609 52 2894 3215 9171;9172 9172 64 SPSEPLIPK 9 1 0 Phospho (STY) _S(ph)PSEPLIPK_ S(0.717)PS(0.283)EPLIPK S(4.03)PS(-4.03)EPLIPK 0 0 1 0 B2R935;A0A024R1S2;Q99741 B2R935 B2R935 CDC6 Cell division control protein 6 homolog MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 528.2679 2 524.25974 1046.50493 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.51 1 80.51 80.01 81.01 0 0 0 0 0.003099 1 42659 65.627 45.923 2 5610 52 2894 3215 9173 9173 64 SPSEPLIPK 9 1 0 Phospho (STY) _S(ph)PSEPLIPK_ S(0.778)PS(0.222)EPLIPK S(5.45)PS(-5.45)EPLIPK 0 0 1 0 B2R935;A0A024R1S2;Q99741 B2R935 B2R935 CDC6 Cell division control protein 6 homolog MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 528.2678 2 524.25974 1046.50493 85274.77 0.99005 0.00051905 -0.064216 -3.3666E-05 0.92584 0.00048538 524.259495596461 528.266835174796 79.27 1.4126 79.27 78.522 79.935 0 333 135 5 0 0 0 0.0036439 1 50676 68.525 57.456 2 1.8773 1.4165 0 10397000 3269400 7127200 5611 52 2894 3215 9174 9174 64 SPSFGDPQLSPEAR 14 0 1 2 Phospho (STY) _S(ph)PSFGDPQLS(ph)PEAR_ S(0.771)PS(0.229)FGDPQLS(1)PEAR S(5.28)PS(-5.28)FGDPQLS(66.06)PEAR 0 0 2 0 O95425 O95425 O95425 SVIL Supervillin ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 829.3298 2 824.326218 1646.63788 NaN NaN NaN 0.3036 0.00025026 NaN NaN NaN NaN 89.749 0.71965 89.749 89.365 90.085 0 0 0 0 3.7985E-05 1 49115 80.738 61.16 3 NaN NaN 0 11239000 0 11239000 5612 948 2895 3216 9175 9175 1644;1645 SPSFGDPQLSPEAR 14 0 1 2 Phospho (STY) _S(ph)PSFGDPQLS(ph)PEAR_ S(0.528)PS(0.472)FGDPQLS(1)PEAR S(0.49)PS(-0.49)FGDPQLS(42.98)PEAR 0 0 2 0 O95425 O95425 O95425 SVIL Supervillin MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 824.3268 2 824.326218 1646.63788 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.866 1 89.866 89.366 90.366 0 0 0 0 0.00010393 1 49326 54.768 40.977 3 5613 948 2895 3216 9176 9176 1644;1645 SPSFGDPQLSPEAR 14 0 1 Phospho (STY) _SPSFGDPQLS(ph)PEAR_ SPSFGDPQLS(1)PEAR S(-52.86)PS(-45.91)FGDPQLS(45.91)PEAR 0 0 1 0 O95425 O95425 O95425 SVIL Supervillin MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 789.3469 2 784.343052 1566.67155 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.165 1 84.165 83.665 84.665 0 0 0 0 4.174E-05 1 45271 58.831 37.878 3 5614 948 2895 3217 9177 9177 1644;1645 SPSFGDPQLSPEAR 14 0 1 Phospho (STY) _SPSFGDPQLS(ph)PEAR_ SPSFGDPQLS(1)PEAR S(-43.64)PS(-37.79)FGDPQLS(37.79)PEAR 0 0 1 0 O95425 O95425 O95425 SVIL Supervillin MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 789.346 2 784.343052 1566.67155 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.5 1 84.5 84 85 0 0 0 0 0.0010082 1 45499 49.482 23.823 3 5615 948 2895 3217 9178 9178 1644;1645 SPSIDLTQSNPDHSSSR 17 0 1 Phospho (STY) _S(ph)PSIDLTQSNPDHSSSR_ S(0.974)PS(0.026)IDLTQSNPDHSSSR S(15.69)PS(-15.69)IDLT(-54.94)QS(-67.71)NPDHS(-84.41)S(-84.29)S(-84.29)R 0 0 1 0 Q8IY92 Q8IY92 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 954.4105 2 954.410183 1906.80581 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.688 1 67.688 67.188 68.188 0 0 0 0 4.8645E-06 1 33349 88.133 56.702 7 5616 1148 2896 3218 9179 9179 2206 SPSLLQSGAK 10 1 0 Phospho (STY) _S(ph)PSLLQSGAK_ S(0.982)PS(0.018)LLQSGAK S(17.26)PS(-17.26)LLQS(-57.3)GAK 0 0 1 0 Q9BQG0;I3L1L3;B4DE42;I3L2H8 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 534.26 2 534.260272 1066.50599 84102.98 0.47271 0.00025255 0.24325 0.00012996 0.71596 0.00038251 534.259937642378 538.267428443676 61.833 1.218 61.833 61.012 62.23 0 342 85 7 0 0 0 0.0012888 4 28364 78.692 58.388 3 0.6427 0.80485 0 26939000 16647000 10292000 5617 1192 2897 3219 9180;9181;9182;9183 9182 2360 SPSPAPAPAPAAAAGPPTR 19 0 1 2 Phospho (STY) _S(ph)PS(ph)PAPAPAPAAAAGPPTR_ S(1)PS(1)PAPAPAPAAAAGPPTR S(47.09)PS(46.62)PAPAPAPAAAAGPPT(-46.62)R 0 0 2 0 A0A024QZH6;Q9H7N4 A0A024QZH6 A0A024QZH6 SR-A1;SCAF1 Splicing factor, arginine/serine-rich 19 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 922.4097 2 922.410616 1842.80668 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.244 1 69.244 68.744 69.744 0 0 0 0 0.0024805 1 34457 47.088 35.649 3 5618 15 2898 3220 9184 9184 19;20 SPSPAVPLR 9 0 1 Phospho (STY) _SPS(ph)PAVPLR_ SPS(1)PAVPLR S(-40.91)PS(40.91)PAVPLR 0 0 1 0 A0A024R3K9;A0A024R3N2;Q6P4R8;E9PQ59;B4DSL1 A0A024R3K9 A0A024R3K9 NFRKB Nuclear factor related to kappa-B-binding protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 502.2521 2 502.25225 1002.48995 85144.61 0.61067 0.00030671 -0.073211 -3.677E-05 0.53746 0.00026994 502.252078074785 507.256390064751 68.884 1.39 68.884 68.248 69.638 0 379 120 4 0 0 0 0.00035185 3 43358 82.029 63.246 2 0.95428 0.75969 0 11744000 6250400 5493900 5619 76 2899 3221 9185;9186;9187 9186 100 SPSPDDILER 10 0 1 Phospho (STY) _SPS(ph)PDDILER_ S(0.084)PS(0.916)PDDILER S(-10.36)PS(10.36)PDDILER 0 0 1 0 B4DZQ5;A0A024QZY5;Q13523;H0YDJ3 B4DZQ5 B4DZQ5 PRPF4B Serine/threonine-protein kinase PRP4 homolog ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 604.7631 2 604.763375 1207.5122 NaN NaN NaN -0.53944 -0.00032623 NaN NaN NaN NaN 85.828 0.1473 85.828 85.742 85.889 0 0 0 0 0.024475 1 46393 44.564 24.777 2 NaN NaN 0 3991100 3991100 0 5620 20 2900 3222 9188 9188 25;26 SPSPYYSR 8 0 1 Phospho (STY) _SPS(ph)PYYSR_ S(0.036)PS(0.963)PYYSR S(-14.22)PS(14.22)PY(-39.69)Y(-47.1)S(-53.31)R 0 0 1 0 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995;H7BXF3;H7C2L4;Q549U1;Q13595 Q8N1H4;Q549U1 Q549U1 DKFZp686F18120;TRA2B;HSU53209;TRA2A Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 523.7147 2 518.710415 1035.40628 85152.12 0.41708 0.00021634 0.2344 0.00012159 0.65148 0.00033793 518.710478288629 523.714563147563 42.445 1.4348 42.445 41.685 43.12 0 498 108 6 0 0 0 0.0062914 2 15383 83.499 52.935 5 1.4915 1.7154 0 11966000 4657300 7308200 5621 1052;556 2901 3223 9189;9190 9190 920;921 SPSQYHDFAEK 11 1 0 Phospho (STY) _S(ph)PSQYHDFAEK_ S(0.978)PS(0.022)QYHDFAEK S(16.38)PS(-16.38)QY(-82.16)HDFAEK 0 0 1 0 W5ZR30;Q9UGU0 W5ZR30 W5ZR30 TCF20 Transcription factor 20 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 698.7874 2 694.779557 1387.54456 NaN NaN NaN 0.065053 4.5198E-05 NaN NaN NaN NaN 58.764 0.8789 58.764 58.239 59.118 0 0 0 0 1.1985E-22 2 26053 117.7 87.537 3 NaN NaN 0 24088000 0 24088000 5622 1227 2902 3224 9191;9192 9191 2500 SPSQYHDFAEK 11 1 0 Phospho (STY) _S(ph)PSQYHDFAEK_ S(0.991)PS(0.009)QYHDFAEK S(20.29)PS(-20.29)QY(-101.5)HDFAEK 0 0 1 0 W5ZR30;Q9UGU0 W5ZR30 W5ZR30 TCF20 Transcription factor 20 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 694.7797 2 694.779557 1387.54456 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.536 1 58.536 58.036 59.036 0 0 0 0 8.9823E-20 1 25997 145.81 100.15 3 5623 1227 2902 3224 9193 9193 2500 SPSQYHDFAEK 11 1 0 Phospho (STY) _S(ph)PSQYHDFAEK_ S(0.952)PS(0.048)QYHDFAEK S(13.01)PS(-13.01)QY(-64.79)HDFAEK 0 0 1 0 W5ZR30;Q9UGU0 W5ZR30 W5ZR30 TCF20 Transcription factor 20 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 694.7816 2 694.779557 1387.54456 72566.41 1.0679 0.00074198 0.51093 0.00035498 1.5789 0.001097 694.779963960433 698.786728503835 32.798 0.64534 32.798 32.46 33.106 0 257 48 7 0 0 0 1.8699E-05 1 17683 92.65 71.642 3 1.4705 0.96349 0 50785000 21075000 29710000 5624 1227 2902 3224 9194 9194 2500 SPSRPILDGK 10 1 1 Phospho (STY) _S(ph)PSRPILDGK_ S(0.5)PS(0.5)RPILDGK S(0)PS(0)RPILDGK 0 0 1 1 O60890 O60890 O60890 OPHN1 Oligophrenin-1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 584.299 2 575.286821 1148.55909 82275.24 0.70139 0.0004035 0.13302 7.6526E-05 0.83441 0.00048003 575.286922704784 584.297971032017 60.035 0.47046 60.035 59.711 60.181 0 100 33 4 0 0 0 0.015638 1 26999 42.809 28.807 2 1.7218 1.9205 0 16278000 6312800 9965600 5625 933 2903 3225 9195 9195 1590;1591 SPSTLLPK 8 1 0 Phospho (STY) _S(ph)PSTLLPK_ S(0.568)PS(0.392)T(0.041)LLPK S(1.61)PS(-1.61)T(-11.46)LLPK 0 0 1 0 E7EVA0;P27816;B5MEG9;Q86Y04;H0Y2V1;H7C4C5;A0A024R2V0;F8W9U4 E7EVA0 E7EVA0 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 465.7437 2 461.735901 921.457249 NaN NaN NaN 0.25805 0.00011915 NaN NaN NaN NaN 76.326 0.30037 76.326 76.075 76.376 0 0 0 0 0.02377 1 48657 44.882 13.011 3 NaN NaN 0 2461400 0 2461400 5626 793 2904 3226 9196 9196 1361 SPTAALNESLVECPK 15 1 0 Phospho (STY) _S(ph)PTAALNESLVECPK_ S(0.815)PT(0.185)AALNESLVECPK S(6.44)PT(-6.44)AALNES(-86.88)LVECPK 0 0 1 0 Q53EZ4 Q53EZ4 Q53EZ4 CEP55 Centrosomal protein of 55 kDa MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 852.3945 2 848.386603 1694.75865 66435.62 1.0465 0.00088783 -0.16318 -0.00013844 0.88331 0.00074939 848.386282190507 852.393727833041 95.821 0.5574 95.821 95.575 96.132 -7.6294E-06 173 49 5 0 0 0 4.8624E-13 3 53806 109.07 109.07 3 1.5262 1.9135 0 27477000 10714000 16763000 5627 1087 2905 3227 9197;9198;9199 9198 2050;2936 SPTPESSTIASYVTLR 16 0 1 Phospho (STY) _S(ph)PTPESSTIASYVTLR_ S(0.834)PT(0.161)PES(0.003)S(0.001)TIASYVTLR S(7.15)PT(-7.15)PES(-23.99)S(-28.81)T(-33.29)IAS(-43.75)Y(-43.84)VT(-43.56)LR 0 0 1 0 H0YGJ6;A0JP02;B4DMB9;B4DJX4;A0A024RAY7;B4DHK5;Q9HAU0 H0YGJ6 H0YGJ6 PLEKHA5 Pleckstrin homology domain-containing family A member 5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 895.4277 2 894.924407 1787.83426 65784.99 0.72171 0.00064588 0.013257 1.1864E-05 0.73497 0.00065774 894.923665152733 899.928267782049 114.82 0.50219 114.82 114.61 115.11 0 156 44 5 0 0 0 0.00032785 1 68455 46.88 34.666 8 1.0636 1.2776 0 17943000 9190900 8752400 5628 187 2906 3228 9200 9200 300 SPTPPLFSLPEAR 13 0 1 Phospho (STY) _S(ph)PTPPLFSLPEAR_ S(0.808)PT(0.192)PPLFSLPEAR S(6.25)PT(-6.25)PPLFS(-41.24)LPEAR 0 0 1 0 J3KRD7;J3QQZ3;J3KT14;A0A087WWS1;Q96FV9 J3KRD7 J3KRD7 THOC1 THO complex subunit 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 746.3665 2 746.365799 1490.71705 72380.79 0.88806 0.00066281 -0.083886 -6.261E-05 0.80417 0.0006002 746.365848448752 751.369732350245 123.63 0.56222 123.63 123.37 123.94 0 203 49 6 0 0 0 0.0051699 2 74738 53.869 43.68 3 1.1245 1.2394 0 7941600 3895400 4046200 5629 261 2907 3229 9201;9202 9201 420 SPTPSPSPPR 10 0 1 Phospho (STY) _SPTPSPS(ph)PPR_ SPTPS(0.056)PS(0.944)PPR S(-78.16)PT(-51.39)PS(-12.28)PS(12.28)PPR 0 0 1 0 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 556.7547 2 551.750071 1101.48559 81834.64 0.63692 0.00035142 0.031613 1.7443E-05 0.66854 0.00036886 551.750104460933 556.754104392572 43.902 1.1548 43.902 43.261 44.416 0 351 84 6 0 0 0 0.00063334 2 16269 84.479 54.294 4 2.3905 2.7116 0 10978000 3246900 7730700 5630 353 2908 3230 9203;9204 9204 557 SPTPSPSPPR 10 0 1 Phospho (STY) _SPTPSPS(ph)PPR_ SPTPS(0.008)PS(0.992)PPR S(-79.07)PT(-45.32)PS(-20.91)PS(20.91)PPR 0 0 1 0 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 551.7505 2 551.750071 1101.48559 81851.77 0.93102 0.00051369 -0.08653 -4.7743E-05 0.84449 0.00046595 551.749960089949 556.754106222676 33.274 1.1301 33.274 32.733 33.863 0 359 85 6 0 0 0 0.00051955 2 17984 85.813 63.073 4 0.95114 0.69541 0 25005000 11874000 13131000 5631 353 2908 3230 9205;9206 9206 557 SPVEMDEDFDVIFDPYAPK 19 1 0 Oxidation (M),Phospho (STY) _S(ph)PVEM(ox)DEDFDVIFDPYAPK_ SPVEM(1)DEDFDVIFDPYAPK S(1)PVEMDEDFDVIFDPYAPK SPVEM(58.83)DEDFDVIFDPYAPK S(53.98)PVEMDEDFDVIFDPY(-53.98)APK 0 1 1 0 O95425;A0A0J9YWY6;B4DXQ4;Q659E9;B4E3H1;B4E3N7 O95425;Q659E9 O95425 SVIL;DKFZp586H1823 Supervillin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1159.9901 2 1155.48163 2308.9487 56641.87 0.042905 4.9576E-05 0.74551 0.00086143 0.78842 0.000911 1155.98420173597 1159.99052367251 132.99 0.5685 132.99 132.65 133.22 0 250 46 8 0 0 0 5.9554E-07 1 80920 58.83 58.83 2 3.3455 4.0444 0 17022000 3544100 13478000 5632 948;686 2909 3231 9207 9207 180 1131 SPVFSDEDSDLDFDISK 17 1 0 Phospho (STY) _S(ph)PVFSDEDSDLDFDISK_ S(0.801)PVFS(0.198)DEDSDLDFDISK S(6.07)PVFS(-6.07)DEDS(-34.45)DLDFDIS(-69.41)K 0 0 1 0 O00566;B3KPV5;U3KQ48 O00566 O00566 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1002.4175 2 998.408983 1994.80341 61336.15 0.67799 0.00067691 0.21765 0.00021731 0.89564 0.00089422 998.910641715758 1002.4162528986 117.61 0.97382 117.61 117.12 118.09 0 682 87 10 0 0 0 7.3417E-12 2 70210 91.62 83.755 4 1.1699 1.4479 0 221230000 103070000 118160000 5633 917 2910 3232 9208;9209 9208 1540;1541;1542 SPVFSDEDSDLDFDISK 17 1 0 Phospho (STY) _SPVFS(ph)DEDSDLDFDISK_ SPVFS(0.999)DEDS(0.001)DLDFDISK S(-52.7)PVFS(31.55)DEDS(-31.55)DLDFDIS(-89.49)K 0 0 1 0 O00566;B3KPV5;U3KQ48 O00566 O00566 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1002.4182 2 998.408983 1994.80341 61392.35 0.66186 0.00066081 0.020933 2.0899E-05 0.6828 0.00068171 998.408956709099 1002.41612837109 118.45 0.95656 118.45 118.04 119 0 590 84 10 0 0 0 4.2704E-30 2 71333 122.31 113.6 4 1.4031 1.7383 0 143030000 63311000 79721000 5634 917 2910 3232 9210;9211 9211 1540;1541;1542 SPVFSDEDSDLDFDISK 17 1 0 Phospho (STY) _SPVFS(ph)DEDSDLDFDISK_ SPVFS(0.994)DEDS(0.006)DLDFDISK S(-41.15)PVFS(22.3)DEDS(-22.3)DLDFDIS(-60.3)K 0 0 1 0 O00566;B3KPV5;U3KQ48 O00566 O00566 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1002.9178 2 998.408983 1994.80341 61104.46 0.3538 0.00035324 -0.36645 -0.00036587 -0.012649 -1.2629E-05 998.408572663943 1002.41555877896 127.06 1.3614 127.06 126.6 127.96 -7.6294E-06 832 122 12 0 0 0 6.9754E-10 2 82019 89.261 89.261 4 1.5925 1.0635 0 284290000 108880000 175410000 5635 917 2910 3232 9212;9213 9213 1540;1541;1542 SPVFSDEDSDLDFDISK 17 1 0 2 Phospho (STY) _S(ph)PVFS(ph)DEDSDLDFDISK_ S(1)PVFS(1)DEDSDLDFDISK S(99.73)PVFS(50.74)DEDS(-50.74)DLDFDIS(-99.06)K 0 0 2 0 O00566;B3KPV5;U3KQ48 O00566 O00566 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1042.9014 2 1038.39215 2074.76974 60106.23 0.70316 0.00073015 0.1115 0.00011578 0.81465 0.00084593 1038.39231046759 1042.39930320201 123.38 1.4722 123.38 122.76 124.24 0 979 131 12 0 0 0 2.3958E-43 2 74620 141.13 141.13 6 0.96712 1.1957 0 363940000 187400000 176540000 5636 917 2910 3233 9214;9215 9215 1540;1541;1542 SPVFSDEDSDLDFDISK 17 1 0 2 Phospho (STY) _SPVFS(ph)DEDS(ph)DLDFDISK_ SPVFS(1)DEDS(1)DLDFDISK S(-46.79)PVFS(46.79)DEDS(67.53)DLDFDIS(-67.53)K 0 0 2 0 O00566;B3KPV5;U3KQ48 O00566 O00566 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1038.8953 2 1038.39215 2074.76974 60223.2 0.83537 0.00086744 0.6092 0.00063259 1.4446 0.0015 1038.39277514315 1042.39993874153 124.75 1.4548 124.75 124.15 125.6 0 938 133 12 0 0 0 2.9899E-43 1 75573 139.46 129.64 6 1.032 1.2758 0 374450000 179200000 195240000 5637 917 2910 3233 9216 9216 1540;1541;1542 SPVGKSPPSTGSTYGSSQK 19 2 0 Phospho (STY) _SPVGKS(ph)PPSTGSTYGSSQK_ S(0.002)PVGKS(0.869)PPS(0.101)T(0.026)GS(0.002)T(0.001)YGSSQK S(-27.57)PVGKS(9.34)PPS(-9.34)T(-15.32)GS(-26.69)T(-32.02)Y(-41.86)GS(-46.27)S(-45.81)QK 0 0 1 1 Q9Y2W1;Q7Z5U1;Q05D20;Q6P0P7;Q6PJV4 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 649.9727 3 644.629727 1930.86735 76235.61 1.0206 0.00065793 -0.095111 -6.1311E-05 0.92552 0.00059662 644.629499065601 649.972386097365 48.402 0.75939 48.402 48.019 48.778 3.8147E-06 283 49 8 0 0 0 6.2272E-08 1 18915 62.605 62.605 9 1.1422 1.292 0 17704000 7756600 9947400 5638 1248 2911 3234 9217 9217 2569;2570 SPVLSNTTTEPASTMSPPPAK 21 1 0 Oxidation (M),Phospho (STY) _SPVLSNTTTEPAST(ph)M(ox)SPPPAK_ SPVLSNTTTEPASTM(1)SPPPAK SPVLSNT(0.001)T(0.009)T(0.009)EPAS(0.093)T(0.444)MS(0.444)PPPAK SPVLSNTTTEPASTM(43.81)SPPPAK S(-39.18)PVLS(-30.4)NT(-25.18)T(-17.16)T(-17.16)EPAS(-6.8)T(0)MS(0)PPPAK 0 1 1 0 A0A075B784;A0A024R8V6;Q9P275;B3KMW2 A0A075B784 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1105.0087 2 1105.00834 2208.00213 58580.68 0.28646 0.00031655 -0.15343 -0.00016954 0.13303 0.000147 1105.0083588248 1109.51690141898 66.906 1.1046 66.906 66.455 67.559 0 461 86 9 0 0 0 1.6598E-05 1 32614 43.813 43.813 8 2.2222 2.7597 0 99773000 32766000 67007000 5639 157 2912 3235 9218 9218 36 243;244;2648 SPVLSNTTTEPASTMSPPPAK 21 1 0 Oxidation (M),Phospho (STY) _SPVLSNTTTEPAST(ph)M(ox)SPPPAK_ SPVLSNTTTEPASTM(1)SPPPAK SPVLSNTTTEPAS(0.117)T(0.442)MS(0.442)PPPAK SPVLSNTTTEPASTM(151.3)SPPPAK S(-126.04)PVLS(-109.23)NT(-96.54)T(-74.92)T(-59.98)EPAS(-5.78)T(0)MS(0)PPPAK 0 1 1 0 A0A075B784;A0A024R8V6;Q9P275;B3KMW2 A0A075B784 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1109.0178 2 1105.00834 2208.00213 58270.59 0.73989 0.00081758 0.32397 0.00035799 1.0639 0.0011756 1105.51015576907 1109.0159147069 67.07 1.2722 67.07 66.472 67.744 0 848 116 10 0 0 0 6.2055E-76 1 42213 151.3 151.3 8 1.7431 1.1602 0 95102000 35481000 59621000 5640 157 2912 3235 9219 9219 36 243;244;2648 SPVPSAFSDQSR 12 0 1 Phospho (STY) _S(ph)PVPSAFSDQSR_ S(1)PVPSAFSDQSR S(37.92)PVPS(-37.92)AFS(-50.46)DQS(-53.48)R 0 0 1 0 A0A140VK53;Q9UQ35;O60382;I3L3Q8 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 679.2927 2 679.292831 1356.57111 NaN NaN NaN 0.32012 0.00021745 NaN NaN NaN NaN 66.954 0.59971 66.954 66.687 67.286 0 0 0 0 0.0020113 1 32628 58.699 41.033 4 NaN NaN 0 10406000 10406000 0 5641 383 2913 3236 9220 9220 629 SPVREPIDNLTPEER 15 0 2 Phospho (STY) _S(ph)PVREPIDNLTPEER_ S(1)PVREPIDNLTPEER S(38.87)PVREPIDNLT(-38.87)PEER 0 0 1 1 H0Y4X3;G3XAC6;B4DRA0;B4DLM0;B3KWX7;Q68DD9;B4E1M7;Q14498;Q5QP22;Q5QP23 H0Y4X3 H0Y4X3 RBM39;DKFZp781C0423 RNA-binding protein 39 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 617.9637 3 611.291046 1830.85131 79021.23 0.33669 0.00020582 0.31575 0.00019301 0.65244 0.00039883 611.625557080778 618.297990036896 84.412 1.2081 84.412 83.698 84.907 -7.6294E-06 321 109 4 0 0 0 0.00049046 1 45198 48.968 48.968 2 0.70044 0.86874 0 41436000 18251000 23185000 5642 608 2914 3237 9221 9221 1005 SPVREPIDNLTPEER 15 0 2 Phospho (STY) _S(ph)PVREPIDNLTPEER_ S(1)PVREPIDNLTPEER S(42.3)PVREPIDNLT(-42.3)PEER 0 0 1 1 H0Y4X3;G3XAC6;B4DRA0;B4DLM0;B3KWX7;Q68DD9;B4E1M7;Q14498;Q5QP22;Q5QP23 H0Y4X3 H0Y4X3 RBM39;DKFZp781C0423 RNA-binding protein 39 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 916.4344 2 916.43293 1830.85131 64424.1 0.2983 0.00027337 0.21031 0.00019274 0.50861 0.00046611 916.934406561941 926.441336629873 84.381 1.3591 84.381 83.604 84.963 0 455 125 5 0 0 0 2.5007E-05 3 45439 78.69 78.69 2 0.71959 0.89275 0 44356000 20066000 24290000 5643 608 2914 3237 9222;9223;9224 9223 1005 SPVREPIDNLTPEER 15 0 2 Phospho (STY) _S(ph)PVREPIDNLTPEER_ S(1)PVREPIDNLTPEER S(34.84)PVREPIDNLT(-34.84)PEER 0 0 1 1 H0Y4X3;G3XAC6;B4DRA0;B4DLM0;B3KWX7;Q68DD9;B4E1M7;Q14498;Q5QP22;Q5QP23 H0Y4X3 H0Y4X3 RBM39;DKFZp781C0423 RNA-binding protein 39 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 611.2916 3 611.291046 1830.85131 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.011 1 84.011 83.511 84.511 0 0 0 0 0.00064345 1 45156 44.759 20.063 2 5644 608 2914 3237 9225 9225 1005 SPVSTRPLPSASQK 14 1 1 Phospho (STY) _S(ph)PVSTRPLPSASQK_ S(0.994)PVS(0.003)T(0.003)RPLPSASQK S(24.98)PVS(-24.98)T(-24.98)RPLPS(-47.77)AS(-50.68)QK 0 0 1 1 Q8ND56 Q8ND56 Q8ND56 LSM14A Protein LSM14 homolog A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 767.8848 2 767.884887 1533.75522 70669.56 1.087 0.00083466 0.56509 0.00043392 1.652 0.0012686 767.884761922291 776.897089760691 35.486 0.69231 35.486 35.21 35.902 0 278 56 8 0 0 0 0.002063 1 19782 58.658 44.452 5 0.88244 0.68033 0 47326000 23412000 23914000 5645 1158 2915 3238 9226 9226 2233 SPYGGGRPGR 10 0 2 Unmodified _SPYGGGRPGR_ 0 0 0 1 A0A024R4M0;P46781 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 502.257 2 502.25704 1002.49953 87906.38 0.55469 0.0002786 -0.13132 -6.5957E-05 0.42337 0.00021264 502.256751801418 512.265332746605 60.479 0.7109 60.479 60.136 60.847 3.8147E-06 150 49 5 0 0 0 0.025482 1 27467 52.786 24.568 1 0.78759 0.94541 0 14936000 7723500 7212300 5646 89 2916 3239 9227 9227 SPYQEFTDHLVK 12 1 0 Unmodified _SPYQEFTDHLVK_ 0 0 0 0 H0YEN5;Q8J014;Q8N5L9;Q3KQT6;P15880;O60249;Q8NI62;Q9BSW5;A4D0Y7;E9PQD7 H0YEN5 H0YEN5 RPS2;rps2;OK/KNS-cl.6;LOC392781 40S ribosomal protein S2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 491.2483 3 488.577025 1462.70924 90009.88 0.45896 0.00022424 -0.10712 -5.2336E-05 0.35184 0.0001719 488.911304478398 491.248367192541 112.96 0.71127 112.96 112.65 113.36 -7.6294E-06 246 67 6 0 0 0 0.0045806 1 66962 46.069 46.069 1 1.1005 1.3672 0 24876000 14382000 10494000 5647 858 2917 3240 9228 9228 SQAPLESSLDSLGDVFLDSGRK 22 1 1 2 Phospho (STY) _SQAPLESS(ph)LDSLGDVFLDS(ph)GRK_ SQAPLES(0.464)S(0.507)LDS(0.041)LGDVFLDS(0.987)GRK S(-38.65)QAPLES(-0.38)S(0.38)LDS(-12.34)LGDVFLDS(18.96)GRK 0 0 2 1 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q96HN5;H0YFY6;Q7Z757;Q59HB8 A0A087WY61 A0A087WY61 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 828.037 3 827.703053 2480.08733 66803.49 0.90134 0.00074604 0.088628 7.3358E-05 0.98997 0.0008194 828.037458173437 834.045029127381 129.85 0.91998 129.85 129.46 130.38 0 512 85 9 0 0 0 9.6767E-13 1 78792 64.914 59.011 10 0.26147 0.30655 0 37946000 27779000 10167000 5648 110 2918 3241 9229 9229 148;149;150;151 SQAPLESSLDSLGDVFLDSGRK 22 1 1 2 Phospho (STY) _SQAPLESS(ph)LDS(ph)LGDVFLDSGRK_ SQAPLES(0.194)S(0.813)LDS(0.994)LGDVFLDSGRK S(-56.72)QAPLES(-6.34)S(6.34)LDS(21.2)LGDVFLDS(-42.78)GRK 0 0 2 1 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q96HN5;H0YFY6;Q7Z757;Q59HB8 A0A087WY61 A0A087WY61 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 828.0385 3 827.703053 2480.08733 68149.91 1.1329 0.00093769 -0.12162 -0.00010066 1.0113 0.00083703 828.037411836909 833.710630962004 133.47 0.23203 133.47 133.33 133.57 0 61 10 10 0 0 0 5.6412E-19 1 81260 83.236 75.524 10 0.39567 0.46286 0 35733000 26083000 9650100 5649 110 2918 3241 9230 9230 148;149;150;151 SQAPLESSLDSLGDVFLDSGRK 22 1 1 Phospho (STY) _SQAPLES(ph)SLDSLGDVFLDSGRK_ SQAPLES(0.49)S(0.49)LDS(0.021)LGDVFLDSGRK S(-56.11)QAPLES(0)S(0)LDS(-13.75)LGDVFLDS(-71.5)GRK 0 0 1 1 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q96HN5;H0YFY6;Q7Z757;Q59HB8 A0A087WY61 A0A087WY61 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 801.3828 3 801.04761 2400.121 67374.41 0.7717 0.00061817 0.03058 2.4496E-05 0.80228 0.00064266 801.381958618797 807.055173581481 131.57 1.4981 131.57 130.71 132.21 0 441 134 5 0 0 0 8.315E-30 2 80022 102.95 94.658 5 0.64555 0.72568 0 18895000 11351000 7544300 5650 110 2918 3242 9231;9232 9231 148;149;150;151 SQAPLESSLDSLGDVFLDSGRK 22 1 1 Phospho (STY) _SQAPLES(ph)SLDSLGDVFLDSGRK_ SQAPLES(0.498)S(0.498)LDS(0.005)LGDVFLDSGRK S(-48.11)QAPLES(0)S(0)LDS(-20.41)LGDVFLDS(-72.35)GRK 0 0 1 1 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q96HN5;H0YFY6;Q7Z757;Q59HB8 A0A087WY61 A0A087WY61 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 807.0563 3 801.04761 2400.121 66746.85 1.129 0.00090441 0.027973 2.2408E-05 1.157 0.00092682 801.382130961381 807.389286472714 134.37 0.36583 134.37 134.23 134.6 0 151 18 13 0 0 0 1.0171E-29 2 86648 101.32 101.32 5 1.5814 1.222 0 175720000 68489000 107230000 5651 110 2918 3242 9233;9234 9233 148;149;150;151 SQASMVINSDTDDEEEVSAALTLAHLK 27 1 0 Oxidation (M),2 Phospho (STY) _SQASM(ox)VINS(ph)DT(ph)DDEEEVSAALTLAHLK_ SQASM(1)VINSDTDDEEEVSAALTLAHLK S(0.027)QAS(0.354)MVINS(0.777)DT(0.777)DDEEEVS(0.065)AALT(0.001)LAHLK SQASM(52.33)VINSDTDDEEEVSAALTLAHLK S(-18.2)QAS(-5.31)MVINS(5.31)DT(5.31)DDEEEVS(-13.18)AALT(-34.46)LAHLK 0 1 2 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1020.4449 3 1017.43648 3049.28762 59870.19 0.31196 0.0003174 0.1573 0.00016004 0.46926 0.00047745 1017.77103525579 1020.44270023303 130.4 1.1057 130.4 129.87 130.97 0 950 103 14 0 0 0 3.4701E-10 2 79111 52.329 49.822 15 0.72584 0.89936 0 133240000 76398000 56847000 5652 1059 2919 3243 9235;9236 9235 304 1981;2924 SQASPSEDEETFELR 15 0 1 Phospho (STY) _SQAS(ph)PSEDEETFELR_ SQAS(0.668)PS(0.332)EDEETFELR S(-51.29)QAS(3.04)PS(-3.04)EDEET(-41.26)FELR 0 0 1 0 Q13829 Q13829 Q13829 TNFAIP1 BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 907.8705 2 902.867286 1803.72002 64511.41 0.78021 0.00070442 -0.4504 -0.00040665 0.32981 0.00029778 902.866148346305 907.870903555578 87.337 1.0151 87.337 86.863 87.878 0 395 95 6 0 0 0 8.1357E-25 1 47671 128.71 115.35 4 1.312 1.6316 0 36650000 18474000 18177000 5653 1053 2920 3244 9237 9237 1964 SQASPSEDEETFELR 15 0 1 Phospho (STY) _SQAS(ph)PSEDEETFELR_ S(0.006)QAS(0.993)PS(0.001)EDEETFELR S(-22.18)QAS(22.18)PS(-28.52)EDEET(-48.03)FELR 0 0 1 0 Q13829 Q13829 Q13829 TNFAIP1 BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 908.3979 2 902.867286 1803.72002 NaN NaN NaN 1.0973 0.00099071 NaN NaN NaN NaN 86.832 0.050507 86.832 86.813 86.863 0 0 0 0 4.3136E-05 1 47129 79.346 58.393 4 NaN NaN 0 5678200 0 5678200 5654 1053 2920 3244 9238 9238 1964 SQASPSEDEETFELR 15 0 1 Phospho (STY) _SQAS(ph)PSEDEETFELR_ S(0.082)QAS(0.849)PS(0.067)EDEET(0.002)FELR S(-10.14)QAS(10.14)PS(-11.06)EDEET(-26.21)FELR 0 0 1 0 Q13829 Q13829 Q13829 TNFAIP1 BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 902.8691 2 902.867286 1803.72002 NaN NaN NaN 0.34749 0.00031374 NaN NaN NaN NaN 90.603 1.1417 90.603 90.114 91.256 0 0 0 0 0.0044509 1 58584 42.708 13.019 4 NaN NaN 0 12133000 12133000 0 5655 1053 2920 3244 9239 9239 1964 SQASPSEDEETFELR 15 0 1 Phospho (STY) _SQAS(ph)PSEDEETFELR_ S(0.002)QAS(0.985)PS(0.014)EDEETFELR S(-27.4)QAS(18.59)PS(-18.59)EDEET(-44.4)FELR 0 0 1 0 Q13829 Q13829 Q13829 TNFAIP1 BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 907.8715 2 902.867286 1803.72002 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.787 1 90.787 90.287 91.287 0 0 0 0 0.00064881 1 58494 92.575 72.469 4 5656 1053 2920 3244 9240 9240 1964 SQDFGNLFSFPSYSQK 16 1 0 Phospho (STY) _S(ph)QDFGNLFSFPSYSQK_ S(0.999)QDFGNLFS(0.001)FPSYSQK S(32.5)QDFGNLFS(-32.5)FPS(-40.8)Y(-40.8)S(-40.8)QK 0 0 1 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 970.9217 2 966.414206 1930.81386 63187.64 0.48063 0.00046449 0.23597 0.00022804 0.7166 0.00069253 966.414774406281 970.923253835611 131.05 0.44633 131.05 130.8 131.25 0 170 39 7 0 0 0 0.0013049 1 79668 40.801 35.373 5 0.75105 0.89057 0 7260000 4162500 3097500 5657 1032 2921 3245 9241 9241 1874;1875 SQDFGNLFSFPSYSQK 16 1 0 Phospho (STY) _SQDFGNLFSFPS(ph)YSQK_ SQDFGNLFS(0.009)FPS(0.749)Y(0.016)S(0.226)QK S(-39.13)QDFGNLFS(-19.37)FPS(5.2)Y(-16.77)S(-5.2)QK 0 0 1 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 966.9147 2 966.414206 1930.81386 NaN NaN NaN -0.36825 -0.00035588 NaN NaN NaN NaN 129.77 0.43161 129.77 129.54 129.97 0 0 0 0 0.0021104 1 78835 44.734 33.261 5 NaN NaN 0 3615400 3615400 0 5658 1032 2921 3245 9242 9242 1874;1875 SQDLESVQEVGGSYWQR 17 0 1 Phospho (STY) _S(ph)QDLESVQEVGGSYWQR_ S(1)QDLESVQEVGGSYWQR S(58.21)QDLES(-58.21)VQEVGGS(-139.1)Y(-147.8)WQR 0 0 1 0 A0A024R3R7;Q5T3Q7;B2RWN5;Q9H583;B7ZAU8;B4E263;B3KWS1;A2VDI1 A0A024R3R7 A0A024R3R7 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1024.9436 2 1024.44148 2046.86841 61002.29 0.38917 0.00039868 0.70761 0.0007249 1.0968 0.0011236 1024.94331494381 1029.44522796813 103.89 0.67012 103.89 103.64 104.31 0 152 49 5 0 0 0 3.754E-73 1 60120 169.43 169.43 4 0.41351 0.49686 0 18012000 12060000 5952200 5659 80 2922 3246 9243 9243 104 SQDQDSEVNELSR 13 0 1 Phospho (STY) _SQDQDS(ph)EVNELSR_ SQDQDS(0.999)EVNELS(0.001)R S(-40.12)QDQDS(31.21)EVNELS(-31.21)R 0 0 1 0 E7ERS3;B4DTK7;Q86VM9 E7ERS3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 798.9494 2 793.820138 1585.62572 70155.87 0.6871 0.00054544 0.010921 8.6697E-06 0.69803 0.00055411 793.820002859317 798.824400177071 53.954 0.71452 53.954 53.639 54.353 0 168 55 4 0 0 0 0.004369 1 22606 63.037 45.173 3 0.92456 1.0311 0 9345000 4295800 5049300 5660 660 2923 3247 9244 9244 1099 SQDVELWEGEVVK 13 1 0 Phospho (STY) _S(ph)QDVELWEGEVVK_ S(1)QDVELWEGEVVK S(95.98)QDVELWEGEVVK 0 0 1 0 B4DN52;Q53GG0;Q9UHB6;F8VQE1;F8VS07;B3KTW2 B4DN52 B4DN52 LIMA1 LIM domain and actin-binding protein 1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 803.3709 2 799.360911 1596.70727 NaN NaN NaN 0.49697 0.00039726 NaN NaN NaN NaN 110.89 0.3978 110.89 110.69 111.09 0 0 0 0 3.8093E-10 1 65465 95.981 77.524 1 NaN NaN 0 7427600 0 7427600 5661 644 2924 3248 9245 9245 1070 SQEPIPDDQKVSDDDK 16 2 0 Phospho (STY) _SQEPIPDDQKVS(ph)DDDK_ SQEPIPDDQKVS(1)DDDK S(-81.62)QEPIPDDQKVS(81.62)DDDK 0 0 1 1 H0YBJ8;E5RJU9;A0A024R9D2;Q86UE4 H0YBJ8 H0YBJ8 MTDH Protein LYRIC MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 632.6025 3 632.601725 1894.78335 75651.37 0.94978 0.00060083 0.30004 0.0001898 1.2498 0.00079063 632.601960261628 637.944555324617 37.175 1.4788 37.175 36.502 37.981 0 845 127 11 0 0 0 1.4448E-09 1 20992 85.35 77.263 2 0.54934 0.40632 0 232850000 146500000 86350000 5662 164 2925 3249 9246 9246 255 SQEPIPDDQKVSDDDK 16 2 0 Phospho (STY) _SQEPIPDDQKVS(ph)DDDK_ SQEPIPDDQKVS(1)DDDK S(-56.3)QEPIPDDQKVS(56.3)DDDK 0 0 1 1 H0YBJ8;E5RJU9;A0A024R9D2;Q86UE4 H0YBJ8 H0YBJ8 MTDH Protein LYRIC MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 948.3986 2 948.39895 1894.78335 62385.53 0.65627 0.0006224 0.30324 0.00028759 0.95951 0.00091 948.399334852061 956.413416055252 37.145 1.6053 37.145 36.502 38.107 0 960 139 12 0 0 0 9.0884E-05 1 21488 58.688 47.744 2 0.51358 0.37671 0 434740000 285240000 149500000 5663 164 2925 3249 9247 9247 255 SQGDEAGGHGEDRPEPLSPK 20 1 1 Phospho (STY) _SQGDEAGGHGEDRPEPLS(ph)PK_ SQGDEAGGHGEDRPEPLS(1)PK S(-46.09)QGDEAGGHGEDRPEPLS(46.09)PK 0 0 1 1 V9H0E3;Q6PK21;A0A0A0MRN5;Q05BV5;B3KMQ6;Q9NZT2 V9H0E3 V9H0E3 OGFR Opioid growth factor receptor MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 720.9836 3 714.974445 2141.9015 71807.73 0.53652 0.0003836 -0.011924 -8.5252E-06 0.5246 0.00037507 714.97434160569 720.982293954428 66.263 0.40593 66.263 66.139 66.545 -7.6294E-06 166 29 7 0 0 0 1.2009E-05 1 32138 48.961 38.796 2 0.87001 1.0317 0 58620000 27640000 30980000 5664 288 2926 3250 9248 9248 456 SQGDEAGGHGEDRPEPLSPK 20 1 1 Phospho (STY) _SQGDEAGGHGEDRPEPLS(ph)PK_ SQGDEAGGHGEDRPEPLS(1)PK S(-84.26)QGDEAGGHGEDRPEPLS(84.26)PK 0 0 1 1 V9H0E3;Q6PK21;A0A0A0MRN5;Q05BV5;B3KMQ6;Q9NZT2 V9H0E3 V9H0E3 OGFR Opioid growth factor receptor MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 721.3163 3 714.974445 2141.9015 71290.74 1.0362 0.00074088 -0.42715 -0.0003054 0.60908 0.00043548 715.3085398119 721.315562238395 25.749 0.95028 25.749 25.255 26.205 0 341 53 12 0 0 0 1.092E-14 2 11876 89.71 75.979 2 0.85043 0.65645 0 96368000 52203000 44164000 5665 288 2926 3250 9249;9250 9250 456 SQHCKPEEGLEAR 13 1 1 Unmodified _SQHCKPEEGLEAR_ 0 0 0 1 B9A060;E7ENJ0;A0A087WZT8;E7EP80;E7EQY6;E7ER35;E9PC03;E7EMU0;E7EUF2;Q2VPA5;E7ETG4;Q96E03;Q6P448;Q6FHI5;Q6FGT7;Q53EX0;A8K072;A0A024RC17;A0A024RC10;Q8WWH6;P43360;P43357;P43356 B9A060 B9A060 MAGEA2B;MAGEA2;MAGEA3;MAGEA6;hCG_1739882;hCG_1740677 Melanoma-associated antigen 6;Melanoma-associated antigen 3;Melanoma-associated antigen 2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 520.5851 3 514.24394 1539.70999 NaN NaN NaN -0.35151 -0.00018076 NaN NaN NaN NaN 83.142 0.20798 83.142 83.031 83.239 0 0 0 0 0.0037339 1 44499 63.709 50.917 1 NaN NaN 0 10000000 0 10000000 5666 205 2927 3251 9251 9251 SQPDPVDTPTSSKPQSK 17 2 0 Unmodified _SQPDPVDTPTSSKPQSK_ 0 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 605.6417 3 600.298767 1797.87447 78152.84 0.69253 0.00041572 -0.046632 -2.7993E-05 0.64589 0.00038773 600.633005478975 605.641537027407 58.866 0.62238 58.866 58.536 59.158 3.8147E-06 234 50 6 0 0 0 0.00031597 1 26075 50.653 50.653 1 1.7006 2.1208 0 38927000 10803000 28123000 5667 994 2928 3252 9252 9252 SQQCQGNELTRPSASSQEK 19 1 1 Phospho (STY) _SQQCQGNELTRPS(ph)ASSQEK_ SQQCQGNELT(0.015)RPS(0.409)AS(0.322)S(0.255)QEK S(-73.76)QQCQGNELT(-14.31)RPS(1.04)AS(-1.04)S(-2.05)QEK 0 0 1 1 A0A024R0F1;Q9UNY4 A0A024R0F1 A0A024R0F1 TTF2 Transcription termination factor 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 738.9865 3 738.986356 2213.93724 70521.42 0.27629 0.00020417 0.42381 0.00031319 0.70009 0.00051736 738.985364135467 744.994547811509 23.096 0.86327 23.096 22.777 23.64 1.9073E-06 152 47 9 0 0 0 3.4483E-10 1 9629 74.584 60.33 5 0.70144 0.54087 0 52164000 28501000 23663000 5668 27 2929 3253 9253 9253 35 SQRPFSPR 8 0 2 Phospho (STY) _SQRPFS(ph)PR_ S(0.002)QRPFS(0.998)PR S(-28.13)QRPFS(28.13)PR 0 0 1 1 A0A024RAC0;Q86V48 A0A024RAC0 A0A024RAC0 LUZP1 Leucine zipper protein 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 537.7535 2 527.745123 1053.47569 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.995 1 58.995 58.495 59.495 0 0 0 0 0.021012 1 26335 42.336 9.1071 2 5669 180 2930 3254 9254 9254 283 SQRPFSPR 8 0 2 Phospho (STY) _SQRPFS(ph)PR_ S(0.001)QRPFS(0.999)PR S(-29.08)QRPFS(29.08)PR 0 0 1 1 A0A024RAC0;Q86V48 A0A024RAC0 A0A024RAC0 LUZP1 Leucine zipper protein 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 527.7455 2 527.745123 1053.47569 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.106 1 59.106 58.606 59.606 0 0 0 0 0.019177 1 26429 43.282 10.053 2 5670 180 2930 3254 9255 9255 283 SQSLPGADSLLAK 13 1 0 Phospho (STY) _SQS(ph)LPGADSLLAK_ S(0.007)QS(0.993)LPGADSLLAK S(-21.42)QS(21.42)LPGADS(-49.02)LLAK 0 0 1 0 Q59FH1;H0Y4W2;F2Z2U4;Q9Y4A5 Q59FH1 Q59FH1 TRRAP Transformation/transcription domain-associated protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 687.8428 2 683.834332 1365.65411 75112.72 1.2917 0.00088331 -0.35933 -0.00024572 0.93237 0.00063759 683.833995695874 687.841064572191 102.43 0.82482 102.43 102.03 102.86 -7.6294E-06 264 62 6 0 0 0 0.0046686 2 58836 59.607 44.596 3 0.92309 1.1248 0 18469000 10517000 7951800 5671 821 2931 3255 9256;9257 9256 1415 SQSLPGADSLLAK 13 1 0 Phospho (STY) _SQS(ph)LPGADSLLAK_ S(0.033)QS(0.967)LPGADSLLAK S(-14.69)QS(14.69)LPGADS(-38.58)LLAK 0 0 1 0 Q59FH1;H0Y4W2;F2Z2U4;Q9Y4A5 Q59FH1 Q59FH1 TRRAP Transformation/transcription domain-associated protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 687.8412 2 683.834332 1365.65411 78098.8 1.1329 0.00077469 -0.15657 -0.00010707 0.97629 0.00066762 683.834189426753 687.841293279899 107.89 0.74034 107.89 107.52 108.26 7.6294E-06 173 70 5 0 0 0 0.0060163 1 69366 46.964 34.388 3 2.3801 1.8744 0 6920500 2337900 4582600 5672 821 2931 3255 9258 9258 1415 SQSLPNSLDYTQTSDPGR 18 0 1 Phospho (STY) _SQS(ph)LPNSLDYTQTSDPGR_ S(0.188)QS(0.809)LPNS(0.003)LDYTQTSDPGR S(-6.33)QS(6.33)LPNS(-24.3)LDY(-44.8)T(-49.72)QT(-55.75)S(-60.41)DPGR 0 0 1 0 H0YNE5;H0YLG5;A0A024R9P6;Q96TC7 H0YNE5 H0YNE5 RMDN3;FAM82C Regulator of microtubule dynamics protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1028.4495 2 1023.44422 2044.87389 61941.39 0.13279 0.0001359 0.048181 4.931E-05 0.18097 0.00018521 1023.44425938977 1028.44834294385 84.325 0.85303 84.325 83.927 84.78 0 233 75 6 0 0 0 1.0108E-06 1 45410 70.783 45.193 7 2.3844 2.9654 0 36636000 10456000 26180000 5673 171 2932 3256 9259 9259 268 SQSLPNSLDYTQTSDPGR 18 0 1 Phospho (STY) _SQS(ph)LPNSLDYTQTSDPGR_ S(0.171)QS(0.725)LPNS(0.098)LDY(0.004)T(0.002)QTSDPGR S(-6.27)QS(6.27)LPNS(-8.7)LDY(-22.26)T(-26.84)QT(-35.01)S(-34.66)DPGR 0 0 1 0 H0YNE5;H0YLG5;A0A024R9P6;Q96TC7 H0YNE5 H0YNE5 RMDN3;FAM82C Regulator of microtubule dynamics protein 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1028.9509 2 1023.44422 2044.87389 59240.75 0.54471 0.00055748 0.58711 0.00060088 1.1318 0.0011584 1023.44527772528 1028.44890176284 88.911 0.71497 88.911 88.527 89.242 0 281 70 6 0 0 0 0.00042021 1 57082 42.382 36.888 7 5.3083 3.7669 0 30530000 5658600 24872000 5674 171 2932 3256 9260 9260 268 SQSPHYFR 8 0 1 Phospho (STY) _SQS(ph)PHYFR_ S(0.015)QS(0.985)PHYFR S(-18.08)QS(18.08)PHY(-44.51)FR 0 0 1 0 Q9UKJ3 Q9UKJ3 Q9UKJ3 GPATCH8 G patch domain-containing protein 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 556.2336 2 551.229306 1100.44406 85063.77 0.54093 0.00029818 0.19992 0.0001102 0.74085 0.00040838 551.229251404739 556.233514934696 61.676 0.32258 61.676 61.546 61.869 0 59 20 5 0 0 0 0.016872 1 28504 54.416 40.647 3 0.70274 0.80081 0 11296000 6836600 4459000 5675 1235 2933 3257 9261 9261 2529 SQSRSNSPLPVPPSK 15 1 1 2 Phospho (STY) _S(ph)QS(ph)RSNSPLPVPPSK_ S(0.506)QS(0.595)RS(0.537)NS(0.363)PLPVPPSK S(0)QS(1.26)RS(0)NS(-2.47)PLPVPPS(-42.29)K 0 0 2 1 V9HVZ0;A8K588;Q13247 V9HVZ0 V9HVZ0 HEL-S-91;SRSF6 Serine/arginine-rich splicing factor 6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 879.9014 2 870.889516 1739.76448 65311.32 0.50865 0.00044298 -0.45687 -0.00039788 0.051781 4.5096E-05 871.890551053261 879.901075106249 66.279 1.472 66.279 65.505 66.978 0 366 109 7 0 0 0 0.00057956 1 32314 61.732 39.257 10 1.5088 1.7648 0 35611000 15876000 19735000 5676 474 2934 3258 9262 9262 825;826;827;828 SQSRSNSPLPVPPSK 15 1 1 2 Phospho (STY) _S(ph)QS(ph)RSNSPLPVPPSK_ S(0.462)QS(0.538)RS(0.538)NS(0.462)PLPVPPSK S(0)QS(0)RS(0)NS(0)PLPVPPS(-35.48)K 0 0 2 1 V9HVZ0;A8K588;Q13247 V9HVZ0 V9HVZ0 HEL-S-91;SRSF6 Serine/arginine-rich splicing factor 6 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 870.8887 2 870.889516 1739.76448 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.728 1 66.728 66.228 67.228 0 0 0 0 0.0035623 1 32598 40.801 15.48 10 5677 474 2934 3258 9263 9263 825;826;827;828 SQTTTERDSDTDVEEEELPVENR 23 0 2 Phospho (STY) _SQT(ph)TTERDSDTDVEEEELPVENR_ S(0.004)QT(0.425)T(0.318)T(0.089)ERDS(0.089)DT(0.076)DVEEEELPVENR S(-19.99)QT(1.25)T(-1.25)T(-6.8)ERDS(-6.8)DT(-7.49)DVEEEELPVENR 0 0 1 1 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 927.3975 3 920.389089 2758.14544 63017.57 0.49422 0.00045488 0.24293 0.00022359 0.73715 0.00067846 920.723235219884 927.395605469849 77.038 1.0869 77.038 76.427 77.514 0 476 95 8 0 0 0 3.4333E-19 1 39810 82.6 66.959 6 0.69653 0.86622 0 79145000 50910000 28235000 5678 1059 2935 3259 9264 9264 2925 SQVAELNDDDKDDEIVFK 18 2 0 Unmodified _SQVAELNDDDKDDEIVFK_ 0 0 0 1 Q9BYG3;H7BZL0;C9J808 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 699.6735 3 693.995413 2078.96441 72034.95 1.1909 0.00082651 0.87063 0.00060422 2.0616 0.0014307 693.99525219094 699.339219925259 90.069 0.75433 90.069 89.731 90.486 0 202 71 4 0 0 0 0.034443 1 58011 25.198 20.76 1 1.2966 1.0546 0 13612000 6475100 7137300 5679 1201 2936 3260 9265 9265 SQVEQQQLITVEK 13 1 0 Phospho (STY) _S(ph)QVEQQQLITVEK_ S(1)QVEQQQLITVEK S(66.84)QVEQQQLIT(-66.84)VEK 0 0 1 0 A0A024R9G7;Q6PL18;A0A0B4J211 A0A024R9G7 A0A024R9G7 ATAD2 ATPase family AAA domain-containing protein 2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 805.3975 2 805.395285 1608.77602 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.78 1 79.78 79.28 80.28 0 0 0 0 7.4979E-06 1 42118 72.662 56.721 2 5680 166 2937 3261 9266 9266 261 SQWSLLSEK 9 1 0 Phospho (STY) _SQWSLLS(ph)EK_ SQWS(0.001)LLS(0.999)EK S(-63.75)QWS(-30.56)LLS(30.56)EK 0 0 1 0 O96028;Q05CW4;H0Y9L4 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 583.2734 2 579.265554 1156.51655 80883.54 0.78202 0.000453 0.13532 7.8386E-05 0.91734 0.00053138 579.265525704546 583.272671882946 104.36 1.2875 104.36 103.86 105.15 -7.6294E-06 333 90 5 0 0 0 0.0049207 1 60574 66.267 40.793 3 0.8056 0.99792 0 24156000 14270000 9886300 5681 953 2938 3262 9267 9267 1658 SQYEQLAEQNR 11 0 1 Unmodified _SQYEQLAEQNR_ 0 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 683.8257 2 683.323305 1364.63206 NaN NaN NaN -0.085922 -5.8713E-05 NaN NaN NaN NaN 59.065 0.8198 59.065 58.822 59.642 3.8147E-06 0 0 0 5.4163E-06 1 26289 91.549 35.291 1 NaN NaN 0 15655000 15655000 0 + 5682 755 2939 3263 9268 9268 SQYEQLAEQNRK 12 1 1 Unmodified _SQYEQLAEQNRK_ 0 0 0 1 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 498.583 3 498.58295 1492.72702 NaN NaN NaN 0.4778 0.00023822 NaN NaN NaN NaN 23.827 0.37338 23.827 23.679 24.053 0 0 0 0 0.0011373 1 10220 70.412 39.584 1 NaN NaN 0 21466000 21466000 0 + 5683 755 2940 3264 9269 9269 SQYEQLAEQNRK 12 1 1 Unmodified _SQYEQLAEQNRK_ 0 0 0 1 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 747.3708 2 747.370786 1492.72702 NaN NaN NaN 0.40562 0.00030315 NaN NaN NaN NaN 23.844 0.35858 23.844 23.679 24.038 0 0 0 0 8.4471E-06 1 10267 94.465 69.08 1 NaN NaN 0 15562000 15562000 0 + 5684 755 2940 3264 9270 9270 SRAEAESMYQIK 12 1 1 Oxidation (M) _SRAEAESM(ox)YQIK_ SRAEAESM(1)YQIK SRAEAESM(58.59)YQIK 0 1 0 1 CON__P05787;P05787;Q969I0;Q7L4M3 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 476.8981 3 476.897769 1427.67148 86959.48 0.46524 0.00022187 -0.01075 -5.1269E-06 0.45449 0.00021675 476.897684738099 482.905268334995 75.703 0.68709 75.703 75.325 76.012 0 251 57 7 0 0 0 0.014499 1 39014 58.595 51.139 1 1.5222 1.8098 0 71658000 26164000 45494000 + 5685 754 2941 3265 9271 9271 204 SRDATPPVSPINMEDQER 18 0 2 Oxidation (M),2 Phospho (STY) _SRDAT(ph)PPVS(ph)PINM(ox)EDQER_ SRDATPPVSPINM(1)EDQER S(0.145)RDAT(0.855)PPVS(0.999)PINMEDQER SRDATPPVSPINM(56.47)EDQER S(-7.71)RDAT(7.71)PPVS(31.54)PINMEDQER 0 1 2 1 Q5U079;Q53HP8;P17275 Q5U079 Q5U079 JUNB Transcription factor jun-B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 746.6402 3 739.967624 2216.88104 71190.32 0.87013 0.00064387 -0.2826 -0.00020911 0.58754 0.00043476 740.301607595075 746.639871942184 64.11 0.99481 64.11 63.568 64.563 0 375 71 8 0 0 0 1.9916E-06 1 30184 56.468 50.104 3 0.96102 1.1951 0 77702000 38361000 39342000 5686 969 2942 3266 9272 9272 273 1721;2879 SREDAGDNDDTEGAIGVR 18 0 2 Unmodified _SREDAGDNDDTEGAIGVR_ 0 0 0 1 Q7Z4B1;Q53GJ1;Q9H4E3;A0A024RAS3;Q9H0S4 Q7Z4B1 Q7Z4B1 MST162;E4-DBP;hCG_27698;DDX47 Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 632.9517 3 626.280435 1875.81948 76265.92 0.83929 0.00052563 0.0020705 1.2967E-06 0.84136 0.00052693 626.280362875536 632.952706253392 75.709 0.48623 75.709 75.446 75.932 0 180 40 6 0 0 0 1.1063E-12 2 38960 73.11 63.053 1 1.0549 1.3101 0 56074000 28201000 27874000 5687 184 2943 3267 9273;9274 9274 SREDAGDNDDTEGAIGVR 18 0 2 Unmodified _SREDAGDNDDTEGAIGVR_ 0 0 0 1 Q7Z4B1;Q53GJ1;Q9H4E3;A0A024RAS3;Q9H0S4 Q7Z4B1 Q7Z4B1 MST162;E4-DBP;hCG_27698;DDX47 Probable ATP-dependent RNA helicase DDX47 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 632.9533 3 626.280435 1875.81948 77444.84 1.0594 0.00066346 0.56373 0.00035306 1.6231 0.0010165 626.615422382463 632.952558566747 31.623 0.71168 31.623 31.294 32.006 0 296 51 9 0 0 0 8.4009E-13 1 16845 72.359 60.716 1 1.3077 1.1277 0 12444000 5992400 6451700 5688 184 2943 3267 9275 9275 SREDSPELNPPPGIEDNR 18 0 2 Phospho (STY) _SREDS(ph)PELNPPPGIEDNR_ S(0.102)REDS(0.898)PELNPPPGIEDNR S(-9.44)REDS(9.44)PELNPPPGIEDNR 0 0 1 1 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 708.319 3 701.311057 2100.91134 71951.05 0.95837 0.00067212 -0.40901 -0.00028684 0.54936 0.00038527 701.645272330721 707.983180286123 81.644 1.7489 81.644 80.715 82.464 7.6294E-06 909 162 9 0 0 0 1.1949E-06 4 43181 66.122 64.962 2 0.87025 1.0833 0 100470000 56180000 44294000 5689 1034 2944 3268 9276;9277;9278;9279 9276 1898 SREDSPELNPPPGIEDNR 18 0 2 Phospho (STY) _SREDS(ph)PELNPPPGIEDNR_ S(0.024)REDS(0.976)PELNPPPGIEDNR S(-16.03)REDS(16.03)PELNPPPGIEDNR 0 0 1 1 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1051.4635 2 1051.46295 2100.91134 58082.96 0.51588 0.00054243 -0.3728 -0.00039198 0.14309 0.00015045 1051.96432119658 1062.47100682027 81.613 1.3892 81.613 80.836 82.225 0 599 126 8 0 0 0 1.5049E-13 1 43647 98.035 75.232 2 1.0368 1.2896 0 81995000 46585000 35410000 5690 1034 2944 3268 9280 9280 1898 SREDSPELNPPPGIEDNR 18 0 2 Phospho (STY) _SREDS(ph)PELNPPPGIEDNR_ SREDS(1)PELNPPPGIEDNR S(-44.7)REDS(44.7)PELNPPPGIEDNR 0 0 1 1 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1061.4727 2 1051.46295 2100.91134 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.589 1 81.589 81.089 82.089 7.6294E-06 0 0 0 1.1282E-13 1 43439 123.19 101.73 2 5691 1034 2944 3268 9281 9281 1898 SRENPEEDEDQRNPAK 16 1 2 Unmodified _SRENPEEDEDQRNPAK_ 0 0 0 2 B1APM4;P35610 B1APM4 B1APM4 SOAT1 Sterol O-acyltransferase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 638.6253 3 638.624313 1912.85111 76410.49 0.80244 0.00051246 -0.33176 -0.00021187 0.47068 0.00030059 638.624144534767 647.967642066526 65.126 0.32877 65.126 64.969 65.298 -7.6294E-06 115 23 6 0 0 0 1.0727E-06 2 31200 73.498 60.379 1 1.3873 1.619 0 96209000 46421000 49788000 5692 521 2945 3269 9282;9283 9282 SRESASPTIPNLDLLEAHTK 20 1 1 2 Phospho (STY) _S(ph)RES(ph)ASPTIPNLDLLEAHTK_ S(0.572)RES(0.628)AS(0.55)PT(0.251)IPNLDLLEAHTK S(0.36)RES(1.41)AS(-0.36)PT(-5.31)IPNLDLLEAHT(-46.4)K 0 0 2 1 O75151 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 786.3687 3 780.36085 2338.06072 68919.31 0.75629 0.00059018 0.15675 0.00012232 0.91304 0.0007125 780.695192351812 786.368283942169 121.43 2.1934 121.43 120.76 122.96 0 1385 168 10 0 0 0 1.8855E-05 1 73038 47.018 38.932 10 1.1468 1.3795 0 176780000 78580000 98199000 5693 934 2946 3270 9284 9284 1596;1597;1600;2850 SRESASPTIPNLDLLEAHTK 20 1 1 3 Phospho (STY) _S(ph)RES(ph)AS(ph)PTIPNLDLLEAHTK_ S(0.784)RES(0.837)AS(0.864)PT(0.514)IPNLDLLEAHTK S(3.54)RES(4.76)AS(5.55)PT(-3.54)IPNLDLLEAHT(-41.09)K 0 0 3 1 O75151 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 813.395 3 807.016294 2418.02705 67572.22 0.84084 0.00067857 0.33492 0.00027028 1.1758 0.00094885 807.350759304309 813.024006146122 123.17 0.75342 123.17 122.83 123.58 0 361 68 9 0 0 0 0.00013 1 74665 41.475 32.146 10 1.0463 1.1973 0 23825000 11692000 12133000 5694 934 2946 3271 9285 9285 1596;1597;1600;2850 SRLDQELK 8 1 1 Unmodified _SRLDQELK_ 0 0 0 1 A0A024R4M0;P46781;F2Z3C0;A8MXK4;B5MCT8;C9JM19;B7Z732 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 494.7746 2 494.774731 987.534909 85614.87 0.53651 0.00026545 -0.26779 -0.0001325 0.26871 0.00013295 494.774645965539 503.785819544753 81.09 1.5766 81.09 80.444 82.021 0 711 144 7 0 0 0 0.014314 2 43357 86.953 37.44 1 0.87222 1.0547 0 263960000 128160000 135800000 5695 89 2947 3272 9286;9287 9287 SRLDQELK 8 1 1 Unmodified _SRLDQELK_ 0 0 0 1 A0A024R4M0;P46781;F2Z3C0;A8MXK4;B5MCT8;C9JM19;B7Z732 A0A024R4M0 A0A024R4M0 RPS9 40S ribosomal protein S9 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 494.7747 2 494.774731 987.534909 85416.45 0.10114 5.0043E-05 0.30688 0.00015184 0.40802 0.00020188 494.774951048982 503.786167059255 24.318 0.43659 24.318 24.154 24.591 0 91 23 7 0 0 0 0.015434 1 10656 83.783 38.103 1 0.81275 0.62375 0 27988000 15023000 12965000 5696 89 2947 3272 9288 9288 SRLGGSLEESK 11 1 1 Phospho (STY) _S(ph)RLGGSLEESK_ S(0.5)RLGGS(0.5)LEESK S(0)RLGGS(0)LEES(-40.68)K 0 0 1 1 REV__B4E1U3 REV__B4E1U3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 621.7914 2 621.789924 1241.5653 74877.63 0.80455 0.00050026 1.5954 0.000992 2.3999 0.0014923 621.791010379808 630.802264731284 76.211 0.88339 76.211 75.798 76.682 -7.6294E-06 327 78 6 0 0 0 0.0068307 2 39427 56.563 17.3 3 0.94657 1.1294 0 94008000 49353000 44655000 + 5697 1269 2948 3273 9289;9290 9290 2604;2605 SRLGGSLEESK 11 1 1 Phospho (STY) _S(ph)RLGGSLEESK_ S(0.5)RLGGS(0.5)LEESK S(0)RLGGS(0)LEES(-38.78)K 0 0 1 1 REV__B4E1U3 REV__B4E1U3 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 630.8026 2 621.789924 1241.5653 74877.63 0.80455 0.00050026 1.5954 0.000992 2.3999 0.0014923 621.791010379808 630.802264731284 76.211 0.88339 76.211 75.798 76.682 -7.6294E-06 327 78 6 0 0 0 0.032146 1 39284 46.462 17.3 3 0.94657 1.1294 0 94008000 49353000 44655000 + 5698 1269 2948 3273 9291 9291 2604;2605 SRLTPVSPESSSTEEK 16 1 1 2 Phospho (STY) _SRLT(ph)PVS(ph)PESSSTEEK_ S(0.4)RLT(0.601)PVS(0.973)PES(0.017)S(0.005)S(0.002)T(0.002)EEK S(-1.79)RLT(1.79)PVS(17.73)PES(-17.73)S(-22.95)S(-27.76)T(-28.07)EEK 0 0 2 1 B4E3V2;E7EMC7;Q13501 B4E3V2 B4E3V2 SQSTM1 Sequestosome-1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 947.3985 2 947.397568 1892.78058 61287.59 0.45905 0.0004349 0.26823 0.00025412 0.72728 0.00068903 947.397267903268 956.407772759198 53.954 1.0642 53.954 53.461 54.525 0 428 83 7 0 0 0 0.00015837 1 22931 44.998 39.027 21 0.98696 1.1534 0 34778000 16558000 18220000 5699 687 2949 3274 9292 9292 1133;2796 SRNSPLLER 9 0 2 Phospho (STY) _SRNS(ph)PLLER_ S(0.024)RNS(0.976)PLLER S(-16.05)RNS(16.05)PLLER 0 0 1 1 A0A024R555;A0A024R5B2;E7ETY4;A9CP04;A0A140VJP1;A8K2S4;E9PC69;Q7KZI7 A0A024R555 A0A024R555 MARK2;Par1b Serine/threonine-protein kinase MARK2 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 586.2907 2 576.28207 1150.54959 NaN NaN NaN 0.13271 7.648E-05 NaN NaN NaN NaN 27.478 0.30843 27.478 27.293 27.602 -1.9073E-06 0 0 0 0.029467 1 13454 51.726 27.958 2 NaN NaN 0 7027000 0 7027000 5700 102 2950 3275 9293 9293 136 SRPAPSPESIK 11 1 1 Phospho (STY) _SRPAPS(ph)PESIK_ S(0.002)RPAPS(0.995)PES(0.003)IK S(-26.96)RPAPS(25.16)PES(-25.16)IK 0 0 1 1 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 624.8044 2 624.802835 1247.59112 77858.59 0.64319 0.00040186 0.33904 0.00021183 0.98223 0.0006137 624.803128261776 633.814240073862 58.675 0.76247 58.675 58.194 58.956 -3.8147E-06 237 61 6 0 0 0 0.006676 2 26019 57.425 35.919 3 1.4511 1.6276 0 18357000 7381400 10976000 5701 1162 2951 3276 9294;9295 9295 2247 SRPAPSPESIK 11 1 1 Phospho (STY) _SRPAPS(ph)PESIK_ SRPAPS(0.856)PES(0.144)IK S(-40.4)RPAPS(7.73)PES(-7.73)IK 0 0 1 1 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 633.8146 2 624.802835 1247.59112 76384.39 0.93023 0.00058121 -0.23612 -0.00014753 0.69412 0.00043369 624.802770577815 633.813860617756 28.16 0.65302 28.16 27.783 28.436 0 190 46 6 0 0 0 0.0062844 2 13932 59.607 43.354 3 1.4959 1.1538 0 60811000 25557000 35254000 5702 1162 2951 3276 9296;9297 9296 2247 SRPTSEGSDIESTEPQK 17 1 1 Phospho (STY) _SRPTSEGS(ph)DIESTEPQK_ S(0.008)RPT(0.079)S(0.107)EGS(0.802)DIES(0.002)T(0.001)EPQK S(-19.85)RPT(-10.04)S(-8.73)EGS(8.73)DIES(-25.44)T(-28.92)EPQK 0 0 1 1 Q4G0J3;H0YA82;D6RFF0 Q4G0J3 Q4G0J3 LARP7 La-related protein 7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 643.6154 3 643.280875 1926.82079 77058.02 0.69004 0.00044389 -0.11731 -7.5464E-05 0.57273 0.00036843 643.280913161925 649.287716113447 50.824 0.77906 50.824 50.438 51.217 0 221 62 6 0 0 0 7.6245E-05 1 20612 48.244 48.244 6 0.30725 0.3366 0 10707000 8192100 2514900 5703 1085 2952 3277 9298 9298 2044 SRPTSEGSDIESTEPQK 17 1 1 Phospho (STY) _SRPTSEGS(ph)DIESTEPQK_ S(0.001)RPT(0.016)S(0.016)EGS(0.968)DIESTEPQK S(-31.73)RPT(-17.91)S(-17.91)EGS(17.91)DIES(-58.48)T(-64.13)EPQK 0 0 1 1 Q4G0J3;H0YA82;D6RFF0 Q4G0J3 Q4G0J3 LARP7 La-related protein 7 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 964.9196 2 964.417674 1926.82079 61939.63 0.77969 0.00075194 0.062657 6.0428E-05 0.84234 0.00081237 964.417856104496 973.429163954382 25.908 0.55631 25.908 25.688 26.245 -1.9073E-06 202 32 10 0 0 0 7.3791E-23 2 12008 117.3 103.64 6 0.41303 0.31907 0 152230000 108280000 43950000 5704 1085 2952 3277 9299;9300 9300 2044 SRQTPTHPLTPR 12 0 2 2 Phospho (STY) _SRQT(ph)PTHPLT(ph)PR_ S(0.35)RQT(0.563)PT(0.097)HPLT(0.99)PR S(-2.08)RQT(2.08)PT(-8.01)HPLT(20.67)PR 0 0 2 1 B7Z8H0;Q96F82;A8K794;Q13415 B7Z8H0 B7Z8H0 ORC1L;ORC1 Origin recognition complex subunit 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 524.2398 3 517.567395 1549.68036 84590.87 -0.0050734 -2.6258E-06 0.69576 0.0003601 0.69069 0.00035748 517.567924374064 524.239932486943 23.186 0.3385 23.186 23.009 23.348 0 64 17 6 0 0 0 0.011431 1 9675 41.323 23.406 6 5.3797 4.6182 0 13399000 1498000 11901000 5705 487 2953 3278 9301 9301 2750;2751 SRSFDYNYR 9 0 2 2 Phospho (STY) _S(ph)RS(ph)FDYNYR_ S(1)RS(1)FDYNYR S(58.67)RS(51.66)FDY(-51.66)NY(-71.32)R 0 0 2 1 Q5JRI1;Q53GD7;A0A0S2Z504;O75494;B3KNY6 Q5JRI1 Q5JRI1 SRSF10 Serine/arginine-rich splicing factor 10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 694.254 2 684.244499 1366.47445 71955.88 0.71661 0.00049033 0.23862 0.00016327 0.95522 0.00065361 684.244531121627 694.252863591258 63.555 2.3731 63.555 62.203 64.576 0 1093 187 8 0 0 0 0.00015343 4 30540 84.718 65.555 6 1.0455 1.3054 0 209600000 98629000 110970000 5706 357 2954 3279 9302;9303;9304;9305 9305 562;563 SRSKSPPKSPEEEGAVSS 18 2 1 2 Phospho (STY) _S(ph)RS(ph)KSPPKSPEEEGAVSS_ S(0.634)RS(0.619)KS(0.526)PPKS(0.221)PEEEGAVSS S(1.72)RS(1.72)KS(-1.72)PPKS(-6.23)PEEEGAVS(-46.19)S(-48.71) 0 0 2 3 Q8NAK9;B3KUY1;A0A024R8U5;Q01130;B3KVY2 Q8NAK9 Q8NAK9 SFRS2;SRSF2 Serine/arginine-rich splicing factor 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 673.6208 3 673.620442 2017.8395 73515.7 0.23631 0.00015918 0.60064 0.0004046 0.83695 0.00056379 673.620924455583 682.299692003401 23.04 0.59035 23.04 22.757 23.348 0 220 31 9 0 0 0 2.2842E-05 1 9574 49.528 49.528 15 0.37111 0.2996 0 195330000 136670000 58658000 5707 156 2955 3280 9306 9306 237;238;239 SRSLGVLPFTLNSGSPEK 18 1 1 4 Phospho (STY) _S(ph)RS(ph)LGVLPFTLNS(ph)GS(ph)PEK_ S(1)RS(1)LGVLPFT(0.44)LNS(0.719)GS(0.841)PEK S(52.44)RS(50.57)LGVLPFT(-2.99)LNS(2.99)GS(5.46)PEK 0 0 4 1 P42695;Q96FA6 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1105.4437 2 1104.94265 2207.87075 57566.93 0.30764 0.00033992 0.45971 0.00050795 0.76735 0.00084787 1104.9433195668 1113.95443769285 145.69 0.51987 145.69 145.54 146.06 0 172 27 10 0 0 0 1.0187E-06 1 84026 60.133 54.639 5 1.0777 1.2209 0 20896000 10327000 10569000 5708 991 2956 3281 9307 9307 1761;1762;1763;1764;2887 SRSPLAIR 8 0 2 2 Phospho (STY) _S(ph)RS(ph)PLAIR_ S(1)RS(1)PLAIR S(93.1)RS(93.1)PLAIR 0 0 2 1 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 530.2413 2 530.241031 1058.46751 81461.37 0.53594 0.00028418 -0.064014 -3.3943E-05 0.47192 0.00025023 530.240964491334 540.249259479364 63.824 2.46 63.824 62.772 65.232 3.8147E-06 978 188 7 0 0 0 0.002528 5 30716 93.096 28.276 1 0.71314 0.89366 0 496340000 293880000 202460000 5709 383 2957 3282 9308;9309;9310;9311;9312 9311 630;631 SRSPLAIR 8 0 2 Phospho (STY) _SRS(ph)PLAIR_ S(0.007)RS(0.993)PLAIR S(-21.6)RS(21.6)PLAIR 0 0 1 1 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 500.2663 2 490.257866 978.50118 86562.78 0.19641 9.6289E-05 0.56331 0.00027617 0.75971 0.00037245 490.258834307334 500.26597105779 68.839 1.2531 68.839 68.586 69.839 0 228 122 4 0 0 0 0.0045872 1 34126 74.611 21.044 2 2.1574 2.6788 0 54790000 19473000 35317000 5710 383 2957 3283 9313 9313 630;631 SRSPLAIR 8 0 2 Phospho (STY) _SRS(ph)PLAIR_ S(0.141)RS(0.859)PLAIR S(-7.84)RS(7.84)PLAIR 0 0 1 1 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 490.2583 2 490.257866 978.50118 85411.51 0.57601 0.0002824 0.063343 3.1055E-05 0.63936 0.00031345 490.257814610641 500.266165572493 34.652 0.80725 34.652 34.321 35.128 0 329 63 8 0 0 0 0.012554 1 19047 55.401 23.558 2 0.84144 0.73305 0 128030000 68910000 59116000 5711 383 2957 3283 9314 9314 630;631 SRSPLELEPEAK 12 1 1 2 Phospho (STY) _S(ph)RS(ph)PLELEPEAK_ S(1)RS(1)PLELEPEAK S(183.23)RS(183.23)PLELEPEAK 0 0 2 1 A0A087WTQ7;A0A087WV56;A0A087WW71;A0A087X0X5;Q92466 A0A087WTQ7 A0A087WTQ7 DDB2 DNA damage-binding protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 758.3285 2 758.328229 1514.64191 70694 0.87784 0.00066569 -0.27848 -0.00021118 0.59936 0.00045451 758.328033127957 767.338940294785 77.432 1.399 77.432 76.682 78.081 0 496 123 6 0 0 0 2.582E-66 2 40328 183.23 151.35 1 0.14122 0.16866 0 101630000 83652000 17974000 5712 245 2958 3284 9315;9316 9316 385;386 SRSPLELEPEAK 12 1 1 2 Phospho (STY) _S(ph)RS(ph)PLELEPEAK_ S(1)RS(1)PLELEPEAK S(53.3)RS(53.3)PLELEPEAK 0 0 2 1 A0A087WTQ7;A0A087WV56;A0A087WW71;A0A087X0X5;Q92466 A0A087WTQ7 A0A087WTQ7 DDB2 DNA damage-binding protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 758.329 2 758.328229 1514.64191 69475.58 1.0703 0.00081164 -0.2532 -0.00019201 0.8171 0.00061963 758.327868664821 767.338712015392 77.287 1.6142 77.287 76.316 77.93 -7.6294E-06 784 153 7 0 0 0 0.004783 1 49466 53.3 42.03 1 0.16232 0.12531 0 102420000 87617000 14800000 5713 245 2958 3284 9317 9317 385;386 SRSPLELEPEAK 12 1 1 Phospho (STY) _S(ph)RSPLELEPEAK_ S(0.586)RS(0.414)PLELEPEAK S(1.51)RS(-1.51)PLELEPEAK 0 0 1 1 A0A087WTQ7;A0A087WV56;A0A087WW71;A0A087X0X5;Q92466 A0A087WTQ7 A0A087WTQ7 DDB2 DNA damage-binding protein 2 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 479.567 3 479.232468 1434.67557 NaN NaN NaN -0.25785 -0.00012357 NaN NaN NaN NaN 61.094 1.1912 61.094 60.252 61.443 0 0 0 0 0.0024974 1 38025 51.591 27.749 2 NaN NaN 0 7507500 7507500 0 5714 245 2958 3285 9318 9318 385;386 SRSPLGFYVHLK 12 1 1 2 Phospho (STY) _S(ph)RS(ph)PLGFYVHLK_ S(1)RS(1)PLGFY(0.001)VHLK S(36.08)RS(33.33)PLGFY(-33.33)VHLK 0 0 2 1 B9ZVT1;Q8IXT5 B9ZVT1 B9ZVT1 RBM12B RNA-binding protein 12B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 521.9087 3 521.90887 1562.70478 83856.5 0.55004 0.00028707 -0.19484 -0.00010169 0.3552 0.00018538 521.908766094343 527.916235171901 118.91 1.0205 118.91 118.19 119.21 7.6294E-06 374 90 6 0 0 0 0.005627 1 71506 43.454 38.471 3 0.98535 1.1582 0 40713000 16808000 23905000 5715 733 2959 3286 9319 9319 1233;1234 SRSPLGFYVHLK 12 1 1 2 Phospho (STY) _S(ph)RS(ph)PLGFYVHLK_ S(1)RS(1)PLGFY(0.001)VHLK S(35.41)RS(35.48)PLGFY(-35.41)VHLK 0 0 2 1 B9ZVT1;Q8IXT5 B9ZVT1 B9ZVT1 RBM12B RNA-binding protein 12B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 522.2438 3 521.90887 1562.70478 83856.49 0.4924 0.00025699 -0.29465 -0.00015378 0.19775 0.00010321 521.90873217977 527.916217159265 119.37 1.0215 119.37 119.08 120.1 0 275 89 6 0 0 0 0.0055708 1 71813 43.532 38.641 3 0.88744 1.0407 0 38198000 18204000 19994000 5716 733 2959 3286 9320 9320 1233;1234 SRSPLLNDR 9 0 2 Phospho (STY) _SRS(ph)PLLNDR_ S(0.039)RS(0.961)PLLNDR S(-13.86)RS(13.86)PLLNDR 0 0 1 1 B4DZQ5;A0A024QZY5;Q13523 B4DZQ5 B4DZQ5 PRPF4B Serine/threonine-protein kinase PRP4 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 379.8516 3 379.851922 1136.53394 100009.5 0.14749 5.6025E-05 -0.11077 -4.2076E-05 0.036723 1.3949E-05 379.851786840997 386.524055256439 60.95 0.43668 60.95 60.833 61.269 3.8147E-06 85 30 5 0 0 0 0.0041603 2 27901 55.261 34.201 2 0.71029 0.85925 0 17210000 8856200 8353300 5717 20 2960 3287 9321;9322 9322 27 SRSPLLNDR 9 0 2 Phospho (STY) _SRS(ph)PLLNDR_ S(0.068)RS(0.932)PLLNDR S(-11.39)RS(11.39)PLLNDR 0 0 1 1 B4DZQ5;A0A024QZY5;Q13523 B4DZQ5 B4DZQ5 PRPF4B Serine/threonine-protein kinase PRP4 homolog MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 569.2746 2 569.274245 1136.53394 81029.8 0.59251 0.0003373 -0.052175 -2.9702E-05 0.54034 0.0003076 569.27410953874 579.282285895207 25.551 0.26812 25.551 25.402 25.67 0 54 14 6 0 0 0 0.013432 1 11753 48.568 25.45 2 0.27544 0.23722 0 20690000 15687000 5003000 5718 20 2960 3287 9323 9323 27 SRSPLLNDRR 10 0 3 Phospho (STY) _SRS(ph)PLLNDRR_ S(0.114)RS(0.886)PLLNDRR S(-8.9)RS(8.9)PLLNDRR 0 0 1 2 B4DZQ5;A0A024QZY5;Q13523 B4DZQ5 B4DZQ5 PRPF4B Serine/threonine-protein kinase PRP4 homolog MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 431.8857 3 431.885626 1292.63505 89842.72 -0.042677 -1.8432E-05 0.12058 5.2077E-05 0.077903 3.3645E-05 431.885636819519 441.894114005734 19.219 0.29321 19.219 19.068 19.362 0 56 10 8 0 0 0 6.3272E-06 1 6195 95.981 53.664 2 0.29297 0.33688 0 104830000 80920000 23906000 5719 20 2961 3288 9324 9324 27 SRSPTPPSSAGLGSNSAPPIPDSR 24 0 2 2 Phospho (STY) _S(ph)RS(ph)PTPPSSAGLGSNSAPPIPDSR_ S(0.577)RS(0.574)PT(0.532)PPS(0.111)S(0.106)AGLGS(0.092)NS(0.007)APPIPDSR S(0.97)RS(0.97)PT(-0.97)PPS(-9.9)S(-9.9)AGLGS(-11.87)NS(-23.43)APPIPDS(-45.67)R 0 0 2 1 Q59ET1;B4DL82;B4DPM4;J3QK89;Q8IWX8 Q59ET1 Q59ET1 CHERP Calcium homeostasis endoplasmic reticulum protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 839.0428 3 832.370297 2494.08906 67978.77 0.72308 0.00060187 -0.72479 -0.0006033 -0.0017133 -1.4261E-06 832.369526295998 839.042263338914 85.493 0.89149 85.493 85.037 85.929 0 222 85 5 0 0 0 8.9282E-08 1 46023 48.449 48.449 28 3.0293 3.7606 0 51833000 14198000 37636000 5720 637 2962 3289 9325 9325 1052;1053 SRSPVDLR 8 0 2 Phospho (STY) _SRS(ph)PVDLR_ S(0.012)RS(0.988)PVDLR S(-19.22)RS(19.22)PVDLR 0 0 1 1 B4DZQ5;A0A024QZY5;Q13523 B4DZQ5 B4DZQ5 PRPF4B Serine/threonine-protein kinase PRP4 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 505.2458 2 505.244956 1008.47536 85395.68 0.54559 0.00027566 0.44925 0.00022698 0.99485 0.00050264 505.244964535876 515.253644283744 60.556 0.51106 60.556 60.306 60.817 0 124 35 5 0 0 0 0.0056269 1 27503 69.672 41.463 2 0.65352 0.81047 0 40485000 23781000 16705000 5721 20 2963 3290 9326 9326 28 SRSRTPLLPR 10 0 3 3 Phospho (STY) _S(ph)RS(ph)RT(ph)PLLPR_ S(1)RS(1)RT(1)PLLPR S(43.99)RS(43.99)RT(43.99)PLLPR 0 0 3 2 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 726.8205 2 711.806416 1421.59828 68989.77 0.62204 0.00044277 0.42466 0.00030228 1.0467 0.00074505 711.806302407071 726.819495069095 69.411 1.0282 69.411 68.894 69.922 0 301 100 6 0 0 0 0.0052491 1 34464 43.991 15.088 1 0.62404 0.72423 0 61171000 35603000 25568000 5722 383 2964 3291 9327 9327 632;633;2703 SRSYTPEYR 9 0 2 2 Phospho (STY) _SRS(ph)YT(ph)PEYR_ S(0.012)RS(0.898)Y(0.118)T(0.965)PEY(0.006)R S(-19.09)RS(9.84)Y(-9.84)T(14.95)PEY(-21.81)R 0 0 2 1 Q549U1;Q13595 Q549U1 Q549U1 HSU53209;TRA2A Transformer-2 protein homolog alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 669.7559 2 659.746875 1317.4792 74713.64 0.90307 0.0005958 0.23013 0.00015183 1.1332 0.00074762 659.746896995124 669.755333795678 46.463 1.4267 46.463 45.843 47.269 0 526 100 8 0 0 0 0.0015227 3 17601 68.515 51.148 10 1.2176 1.4982 0 27555000 12746000 14809000 5723 1052 2965 3292 9328;9329;9330 9329 1963;2921 SRTPLLPR 8 0 2 2 Phospho (STY) _S(ph)RT(ph)PLLPR_ S(1)RT(1)PLLPR S(119.05)RT(119.05)PLLPR 0 0 2 1 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 550.2573 2 550.256682 1098.49881 80086.25 0.51828 0.00028519 -0.22855 -0.00012576 0.28973 0.00015942 550.256652258569 560.264760869206 72.721 2.2206 72.721 71.63 73.85 -7.6294E-06 1036 190 9 0 0 0 0.00053956 3 36648 119.05 30.809 1 0.62263 0.77948 0 393020000 246750000 146270000 5724 383 2966 3293 9331;9332;9333 9331 633;2703 SRTSPAPWK 9 1 1 Phospho (STY) _SRT(ph)SPAPWK_ S(0.232)RT(0.493)S(0.275)PAPWK S(-3.27)RT(2.54)S(-2.54)PAPWK 0 0 1 1 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 555.2612 2 555.260606 1108.50666 NaN NaN NaN 0.037191 2.0651E-05 NaN NaN NaN NaN 65.832 0.54986 65.832 65.577 66.127 0 0 0 0 0.021589 1 31742 65.232 34.682 3 NaN NaN 0 41303000 41303000 0 5725 383 2967 3294 9334 9334 634;2704 SRTSPAPWK 9 1 1 Phospho (STY) _S(ph)RTSPAPWK_ S(0.493)RT(0.309)S(0.199)PAPWK S(2.03)RT(-2.03)S(-3.95)PAPWK 0 0 1 1 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 555.2603 2 555.260606 1108.50666 81839.41 0.67182 0.00037303 -0.35697 -0.00019821 0.31485 0.00017482 555.260278144153 564.271778025815 28.443 0.4631 28.443 28.287 28.75 0 120 30 7 0 0 0 0.0046264 1 14227 64.439 25.291 3 0.38306 0.29424 0 29301000 21353000 7947800 5726 383 2967 3294 9335 9335 634;2704 SRVFDLQFSTDSPR 14 0 2 2 Phospho (STY) _S(ph)RVFDLQFSTDS(ph)PR_ S(0.988)RVFDLQFS(0.022)T(0.021)DS(0.968)PR S(21.88)RVFDLQFS(-17.63)T(-18.08)DS(17.63)PR 0 0 2 1 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 917.8885 2 907.879149 1813.74374 65342.97 0.61913 0.0005621 0.44163 0.00040095 1.0608 0.00096305 907.878811613062 917.888404939123 110.64 0.74364 110.64 110.28 111.03 0 216 62 6 0 0 0 0.0017032 1 65211 45.723 33.168 6 1.3585 1.6716 0 27587000 11410000 16176000 5727 464 2968 3295 9336 9336 808;809;810;2739 SSATSGDIWPGLSAYDNSPR 20 0 1 Phospho (STY) _SSATSGDIWPGLSAYDNS(ph)PR_ SSATSGDIWPGLS(0.157)AY(0.007)DNS(0.835)PR S(-36.07)S(-36.07)AT(-36.07)S(-36.07)GDIWPGLS(-7.26)AY(-20.86)DNS(7.26)PR 0 0 1 0 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09;E9PJA7 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1086.4714 2 1080.96532 2159.91609 59392.8 0.34736 0.00037549 0.6475 0.00069992 0.99486 0.0010754 1081.46721568222 1086.47161839371 115.89 0.53545 115.89 115.58 116.11 0 154 47 5 0 0 0 0.00021654 1 69177 40.962 28.401 7 1.0366 1.2379 0 16536000 5386800 11149000 5728 809 2969 3296 9337 9337 1399 SSDAFTTQHALR 12 0 1 Unmodified _SSDAFTTQHALR_ 0 0 0 0 Q59HG1;O95239;Q6PKB2 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 672.333 2 667.32839 1332.64223 NaN NaN NaN -0.72482 -0.00048369 NaN NaN NaN NaN 78.655 0.13228 78.655 78.554 78.687 0 0 0 0 4.6746E-10 1 41287 102.06 85.808 1 NaN NaN 0 4006600 0 4006600 5729 944 2970 3297 9338 9338 SSDESNFDVPPR 12 0 1 2 Phospho (STY) _S(ph)S(ph)DESNFDVPPR_ S(0.985)S(0.985)DES(0.03)NFDVPPR S(18.06)S(18.06)DES(-18.06)NFDVPPR 0 0 2 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 755.2685 2 755.268368 1508.52218 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.58 1 80.58 80.08 81.08 0 0 0 0 0.0028502 1 42712 51.927 34.063 3 5730 962 2971 3298 9339 9339 1701;1702 SSDESNFDVPPR 12 0 1 2 Phospho (STY) _S(ph)S(ph)DESNFDVPPR_ S(0.963)S(0.963)DES(0.075)NFDVPPR S(13.93)S(13.93)DES(-13.93)NFDVPPR 0 0 2 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 759.8453 2 755.268368 1508.52218 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.688 1 80.688 80.188 81.188 -7.6294E-06 0 0 0 0.0038343 1 42791 50.353 42.973 3 5731 962 2971 3298 9340 9340 1701;1702 SSDESNFDVPPR 12 0 1 2 Phospho (STY) _S(ph)S(ph)DESNFDVPPR_ S(0.988)S(0.988)DES(0.025)NFDVPPR S(18.97)S(18.97)DES(-18.97)NFDVPPR 0 0 2 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 760.2738 2 755.268368 1508.52218 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.751 1 80.751 80.251 81.251 -7.6294E-06 0 0 0 0.00030726 1 42835 63.283 53.051 3 5732 962 2971 3298 9341 9341 1701;1702 SSDQPLTVPVSPK 13 1 0 Phospho (STY) _SSDQPLTVPVS(ph)PK_ SSDQPLTVPVS(1)PK S(-129.1)S(-129.1)DQPLT(-50.47)VPVS(50.47)PK 0 0 1 0 B3KM90;Q643R0;Q9ULW0;Q96FC3 B3KM90 B3KM90 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 721.8566 2 717.847439 1433.68033 70980.78 0.69885 0.00050166 0.22256 0.00015976 0.92141 0.00066143 717.84756264924 721.854679378736 87.438 1.7039 87.438 86.563 88.267 0 1058 157 9 0 0 0 3.3061E-53 5 47676 167.37 155.84 4 0.60501 0.74701 0 663980000 398230000 265740000 5733 571 2972 3299 9342;9343;9344;9345;9346 9345 949 SSDQPLTVPVSPK 13 1 0 Phospho (STY) _SSDQPLTVPVS(ph)PK_ SSDQPLT(0.004)VPVS(0.996)PK S(-64.3)S(-64.3)DQPLT(-24.54)VPVS(24.54)PK 0 0 1 0 B3KM90;Q643R0;Q9ULW0;Q96FC3 B3KM90 B3KM90 HCTP4;TPX2 Targeting protein for Xklp2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 717.8482 2 717.847439 1433.68033 71557.87 1.1939 0.000857 -0.20034 -0.00014382 0.99351 0.00071319 717.847554331814 721.854340966266 90.419 2.2248 90.419 89.575 91.8 0 1529 212 11 0 0 0 0.000719 4 57808 73.834 65.105 4 1.3731 0.91544 0 768850000 324290000 444560000 5734 571 2972 3299 9347;9348;9349;9350 9347 949 SSDYQFPSSPFTDTLK 16 1 0 2 Phospho (STY) _SS(ph)DYQFPS(ph)SPFTDTLK_ S(0.444)S(0.556)DYQFPS(0.516)S(0.44)PFT(0.041)DT(0.002)LK S(-0.94)S(0.94)DY(-45.31)QFPS(0.65)S(-0.65)PFT(-11.02)DT(-23.48)LK 0 0 2 0 Q9UK61 Q9UK61 Q9UK61 FAM208A Protein FAM208A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 990.3909 2 990.389212 1978.76387 64295.03 0.70946 0.00070264 -0.060512 -5.9931E-05 0.64894 0.00064271 990.891089839206 994.394951415042 127.97 0.52434 127.97 127.72 128.24 0 150 45 5 0 0 0 1.0153E-06 1 77639 78.441 78.441 21 0.78764 0.93398 0 7433600 3814400 3619100 5735 1234 2973 3300 9351 9351 2523;2524;2525 SSDYQFPSSPFTDTLK 16 1 0 Phospho (STY) _SSDYQFPSS(ph)PFTDTLK_ SSDYQFPS(0.105)S(0.684)PFT(0.105)DT(0.105)LK S(-48.5)S(-48.5)DY(-40.79)QFPS(-8.13)S(8.13)PFT(-8.13)DT(-8.13)LK 0 0 1 0 Q9UK61 Q9UK61 Q9UK61 FAM208A Protein FAM208A ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 954.915 2 950.406047 1898.79754 NaN NaN NaN 0.96322 0.00091545 NaN NaN NaN NaN 119.29 0.32547 119.29 119.16 119.49 0 0 0 0 8.573E-05 1 71719 53.995 34.255 7 NaN NaN 0 5195700 0 5195700 5736 1234 2973 3301 9352 9352 2523;2524;2525 SSFSSDPDESEGIPLK 16 1 0 Phospho (STY) _S(ph)SFSSDPDESEGIPLK_ S(0.495)S(0.495)FS(0.01)SDPDESEGIPLK S(0)S(0)FS(-16.97)S(-38.34)DPDES(-50.88)EGIPLK 0 0 1 0 Q70L73 Q70L73 Q70L73 MKI67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 891.8821 2 887.874579 1773.73461 66084.71 1.2917 0.0011469 -0.50226 -0.00044594 0.78945 0.00070093 887.87407280005 892.383379595317 92.966 0.68723 92.966 92.6 93.287 0 204 57 5 0 0 0 0.00012567 2 51456 56.482 44.79 5 0.96927 1.2187 0 28775000 12373000 16403000 5737 1130 2974 3302 9353;9354 9353 2160;2161;2162;2163 SSFSSDPDESEGIPLK 16 1 0 Phospho (STY) _SSFSS(ph)DPDESEGIPLK_ SSFS(0.031)S(0.969)DPDESEGIPLK S(-47.54)S(-47.54)FS(-14.98)S(14.98)DPDES(-45.97)EGIPLK 0 0 1 0 Q70L73 Q70L73 Q70L73 MKI67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 887.8743 2 887.874579 1773.73461 64337.63 0.95497 0.00084789 -0.44244 -0.00039283 0.51253 0.00045507 887.874013706774 891.881192703653 94.703 1.2058 94.703 94.064 95.27 0 621 97 10 0 0 0 8.3824E-30 2 52922 122.33 114.46 5 1.5952 1.9717 0 410930000 154730000 256200000 5738 1130 2974 3302 9355;9356 9356 2160;2161;2162;2163 SSFSSDPDESEGIPLK 16 1 0 Phospho (STY) _S(ph)SFSSDPDESEGIPLK_ S(0.471)S(0.471)FS(0.049)S(0.009)DPDESEGIPLK S(0)S(0)FS(-9.86)S(-17.16)DPDES(-41.99)EGIPLK 0 0 1 0 Q70L73 Q70L73 Q70L73 MKI67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 891.8826 2 887.874579 1773.73461 65100.46 1.0751 0.00095456 -0.030951 -2.748E-05 1.0442 0.00092708 887.87438462149 891.881773906269 97.872 0.84217 97.872 97.473 98.315 0 335 76 7 0 0 0 0.00013078 1 62926 55.186 40.767 5 2.6899 2.0199 0 18693000 5679600 13014000 5739 1130 2974 3302 9357 9357 2160;2161;2162;2163 SSFSSDPDESEGIPLK 16 1 0 Phospho (STY) _SSFSS(ph)DPDESEGIPLK_ S(0.003)S(0.003)FS(0.241)S(0.752)DPDES(0.001)EGIPLK S(-24.15)S(-24.15)FS(-4.94)S(4.94)DPDES(-28.83)EGIPLK 0 0 1 0 Q70L73 Q70L73 Q70L73 MKI67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 888.377 2 887.874579 1773.73461 64240.45 1.1903 0.0010568 -0.23462 -0.00020831 0.95566 0.0008485 887.874603507632 891.881493099264 99.883 2.361 99.883 99.069 101.43 0 1186 225 11 0 0 0 6.7158E-05 3 64477 66.387 66.387 5 3.2537 2.1711 0 458920000 110180000 348740000 5740 1130 2974 3302 9358;9359;9360 9360 2160;2161;2162;2163 SSFSSDPDESEGIPLK 16 1 0 2 Phospho (STY) _SS(ph)FSS(ph)DPDESEGIPLK_ S(0.407)S(0.478)FS(0.196)S(0.918)DPDES(0.001)EGIPLK S(-0.8)S(0.8)FS(-4.76)S(11.95)DPDES(-33.5)EGIPLK 0 0 2 0 Q70L73 Q70L73 Q70L73 MKI67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 932.3667 2 927.857745 1853.70094 63310.88 1.4414 0.0013374 -0.047694 -4.4253E-05 1.3937 0.0012932 927.857833902433 931.864694351883 99.727 1.1742 99.727 99.285 100.46 7.6294E-06 547 94 8 0 0 0 0.00011642 1 56640 53.168 46.727 10 1.2863 1.5943 0 128500000 48197000 80299000 5741 1130 2974 3303 9361 9361 2160;2161;2162;2163 SSFSSDPDESEGIPLK 16 1 0 2 Phospho (STY) _SSFS(ph)S(ph)DPDESEGIPLK_ S(0.306)S(0.306)FS(0.694)S(0.694)DPDES(0.001)EGIPLK S(-6.82)S(-6.82)FS(6.82)S(6.82)DPDES(-32.69)EGIPLK 0 0 2 0 Q70L73 Q70L73 Q70L73 MKI67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 927.8618 2 927.857745 1853.70094 64820.7 1.2191 0.0011311 0.54305 0.00050387 1.7621 0.001635 927.858444218569 931.865397426086 102.96 0.78229 102.96 102.53 103.31 0 204 53 6 0 0 0 9.2367E-05 1 59476 57.175 47.687 10 1.7773 2.1373 0 15765000 6166400 9598400 5742 1130 2974 3303 9362 9362 2160;2161;2162;2163 SSFSSDPDESEGIPLK 16 1 0 2 Phospho (STY) _SS(ph)FSS(ph)DPDESEGIPLK_ S(0.442)S(0.544)FS(0.021)S(0.991)DPDES(0.001)EGIPLK S(-0.9)S(0.9)FS(-15.93)S(21.44)DPDES(-28.55)EGIPLK 0 0 2 0 Q70L73 Q70L73 Q70L73 MKI67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 927.8597 2 927.857745 1853.70094 64018.99 1.0881 0.0010096 0.35836 0.00033251 1.4465 0.0013421 928.359613839312 931.865198123923 110.33 1.409 110.33 109.84 111.25 0 793 130 10 0 0 0 8.3267E-05 1 70867 60.246 52.654 10 3.2271 2.1569 0 168830000 38364000 130470000 5743 1130 2974 3303 9363 9363 2160;2161;2162;2163 SSFSSDPDESEGIPLK 16 1 0 3 Phospho (STY) _SS(ph)FS(ph)S(ph)DPDESEGIPLK_ S(0.531)S(0.596)FS(0.936)S(0.936)DPDESEGIPLK S(-0.65)S(0.65)FS(8.69)S(8.69)DPDES(-43.47)EGIPLK 0 0 3 0 Q70L73 Q70L73 Q70L73 MKI67 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 971.8483 2 967.84091 1933.66727 NaN NaN NaN -0.02859 -2.7671E-05 NaN NaN NaN NaN 108.78 1.795 108.78 108.08 109.88 0 0 0 0 1.4294E-06 1 63878 68.257 56.614 10 NaN NaN 0 95811000 0 95811000 5744 1130 2974 3304 9364 9364 2160;2161;2162;2163 SSFSSDPDESEGIPLK 16 1 0 3 Phospho (STY) _S(ph)S(ph)FS(ph)SDPDESEGIPLK_ S(0.75)S(0.75)FS(0.75)S(0.75)DPDES(0.001)EGIPLK S(0)S(0)FS(0)S(0)DPDES(-31.35)EGIPLK 0 0 3 0 Q70L73 Q70L73 Q70L73 MKI67 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 967.8428 2 967.84091 1933.66727 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.17 1 108.17 107.67 108.67 0 0 0 0 0.00038528 1 63347 45.915 34.703 10 5745 1130 2974 3304 9365 9365 2160;2161;2162;2163 SSFSSDPDESEGIPLK 16 1 0 3 Phospho (STY) _SS(ph)FS(ph)S(ph)DPDESEGIPLK_ S(0.62)S(0.688)FS(0.846)S(0.846)DPDESEGIPLK S(-0.87)S(0.87)FS(3.93)S(3.93)DPDES(-42.03)EGIPLK 0 0 3 0 Q70L73 Q70L73 Q70L73 MKI67 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 967.8409 2 967.84091 1933.66727 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.93 1 108.93 108.43 109.43 0 0 0 0 4.2839E-07 1 63949 70.197 49.861 10 5746 1130 2974 3304 9366 9366 2160;2161;2162;2163 SSGEIVYCGQVFEK 14 1 0 Unmodified _SSGEIVYCGQVFEK_ 0 0 0 0 M0R0P7;M0R3D6;M0R1A7;M0R117;B4DM74;B2R4C0;Q02543;B4DM94;B4DUV3;Q53HD3 M0R0P7 M0R0P7 RPL18A 60S ribosomal protein L18a MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 801.8779 2 801.877056 1601.73956 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.722 1 93.722 93.222 94.222 7.6294E-06 0 0 0 2.6331E-05 1 52304 79.659 60.336 1 5747 525 2975 3305 9367 9367 SSGEIVYCGQVFEK 14 1 0 Unmodified _SSGEIVYCGQVFEK_ 0 0 0 0 M0R0P7;M0R3D6;M0R1A7;M0R117;B4DM74;B2R4C0;Q02543;B4DM94;B4DUV3;Q53HD3 M0R0P7 M0R0P7 RPL18A 60S ribosomal protein L18a MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 805.8857 2 801.877056 1601.73956 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.747 1 93.747 93.247 94.247 7.6294E-06 0 0 0 0.00010028 1 52326 57.019 43.25 1 5748 525 2975 3305 9368 9368 SSGHSSSELSPDAVEK 16 1 0 Phospho (STY) _SSGHSSSELS(ph)PDAVEK_ SSGHSSS(0.001)ELS(0.999)PDAVEK S(-89.99)S(-89.99)GHS(-69.67)S(-46.55)S(-31.28)ELS(31.28)PDAVEK 0 0 1 0 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 852.8641 2 848.856721 1695.69889 67343.18 0.61464 0.00052174 0.42582 0.00036146 1.0405 0.0008832 848.856997448207 852.863875644312 64.883 0.29135 64.883 64.72 65.012 0 97 20 6 0 0 0 8.3687E-73 2 31042 168.55 150.54 6 0.92298 1.1687 0 43422000 20681000 22742000 5749 383 2976 3306 9369;9370 9370 635;636;637;638 SSGHSSSELSPDAVEK 16 1 0 Phospho (STY) _S(ph)SGHSSSELSPDAVEK_ S(0.303)S(0.303)GHS(0.303)S(0.071)S(0.018)ELS(0.001)PDAVEK S(0)S(0)GHS(0)S(-6.28)S(-12.34)ELS(-23.11)PDAVEK 0 0 1 0 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 852.8651 2 848.856721 1695.69889 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.229 1 63.229 62.729 63.729 0 0 0 0 0.0039283 1 29733 41.242 30.078 6 5750 383 2976 3306 9371 9371 635;636;637;638 SSGHSSSELSPDAVEK 16 1 0 Phospho (STY) _SSGHSSSELS(ph)PDAVEK_ SSGHS(0.001)S(0.01)S(0.254)ELS(0.735)PDAVEK S(-40.22)S(-40.22)GHS(-27.64)S(-18.67)S(-4.62)ELS(4.62)PDAVEK 0 0 1 0 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 849.3589 2 848.856721 1695.69889 65413.45 0.99204 0.0008421 1.2595 0.0010691 2.2516 0.0019112 849.359792578839 852.864112652811 38.482 1.0011 38.482 38.013 39.014 0 358 89 7 0 0 0 0.00012815 2 22184 55.851 45.898 6 0.93757 0.65715 0 22901000 10390000 12511000 5751 383 2976 3306 9372;9373 9373 635;636;637;638 SSGSETEQVVDFSDR 15 0 1 Phospho (STY) _S(ph)SGSETEQVVDFSDR_ S(0.333)S(0.333)GS(0.333)ET(0.001)EQVVDFSDR S(0)S(0)GS(0)ET(-24.67)EQVVDFS(-77.65)DR 0 0 1 0 O95251 O95251 O95251 KAT7 Histone acetyltransferase KAT7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 867.3535 2 861.846353 1721.67815 67745.9 0.67683 0.00058333 -0.4289 -0.00036965 0.24793 0.00021368 861.845892952555 866.84992397624 82.718 0.67445 82.718 82.528 83.203 0 137 61 4 0 0 0 3.1583E-06 2 44267 83.499 59.118 5 0.55454 0.68229 0 23996000 15088000 8907400 5752 945 2977 3307 9374;9375 9374 1634;1635;1636 SSGSETEQVVDFSDR 15 0 1 Phospho (STY) _S(ph)SGSETEQVVDFSDR_ S(0.323)S(0.323)GS(0.323)ET(0.032)EQVVDFSDR S(0)S(0)GS(0)ET(-10.1)EQVVDFS(-58.91)DR 0 0 1 0 O95251 O95251 O95251 KAT7 Histone acetyltransferase KAT7 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 861.8498 2 861.846353 1721.67815 NaN NaN NaN -0.24952 -0.00021504 NaN NaN NaN NaN 82.477 0.50419 82.477 82.033 82.537 0 0 0 0 0.0002296 1 43945 64.878 49.612 5 NaN NaN 0 16109000 16109000 0 5753 945 2977 3307 9376 9376 1634;1635;1636 SSGSETEQVVDFSDR 15 0 1 Phospho (STY) _SSGS(ph)ETEQVVDFSDR_ S(0.191)S(0.191)GS(0.616)ET(0.001)EQVVDFSDR S(-5.08)S(-5.08)GS(5.08)ET(-28.63)EQVVDFS(-78.08)DR 0 0 1 0 O95251 O95251 O95251 KAT7 Histone acetyltransferase KAT7 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 866.8524 2 861.846353 1721.67815 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.431 1 82.431 81.931 82.931 0 0 0 0 0.00056814 1 44049 90.367 66.762 5 5754 945 2977 3307 9377 9377 1634;1635;1636 SSGSETEQVVDFSDR 15 0 1 Phospho (STY) _S(ph)SGSETEQVVDFSDR_ S(0.324)S(0.324)GS(0.324)ET(0.027)EQVVDFSDR S(0)S(0)GS(0)ET(-10.8)EQVVDFS(-51.41)DR 0 0 1 0 O95251 O95251 O95251 KAT7 Histone acetyltransferase KAT7 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 862.3476 2 861.846353 1721.67815 66588.34 0.92959 0.00080117 0.059915 5.1637E-05 0.98951 0.00085281 861.84628656107 866.850440951993 85.616 0.59808 85.616 85.322 85.921 7.6294E-06 254 54 6 0 0 0 0.0011908 2 55127 52.344 44.616 5 1.1272 0.82186 0 25473000 11211000 14263000 5755 945 2977 3307 9378;9379 9379 1634;1635;1636 SSGSETEQVVDFSDR 15 0 1 2 Phospho (STY) _S(ph)S(ph)GSETEQVVDFSDR_ S(0.623)S(0.623)GS(0.623)ET(0.13)EQVVDFSDR S(0)S(0)GS(0)ET(-8.27)EQVVDFS(-65.66)DR 0 0 2 0 O95251 O95251 O95251 KAT7 Histone acetyltransferase KAT7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 902.3333 2 901.829518 1801.64448 65291.27 1.4659 0.001322 -0.18047 -0.00016275 1.2855 0.0011593 901.829241841528 906.833357695578 91.236 0.78081 91.236 90.796 91.577 0 262 67 6 0 0 0 1.6998E-05 3 50241 79.82 54.383 10 0.75736 0.95231 0 43083000 25345000 17738000 5756 945 2977 3308 9380;9381;9382 9381 1634;1635;1636 SSGSPYGGGYGSGGGSGGYGSR 22 0 1 Phospho (STY) _SSGS(ph)PYGGGYGSGGGSGGYGSR_ S(0.054)S(0.054)GS(0.893)PYGGGYGSGGGSGGYGSR S(-12.21)S(-12.21)GS(12.21)PY(-52.47)GGGY(-75.3)GS(-84.35)GGGS(-97)GGY(-101.35)GS(-99.1)R 0 0 1 0 B4E3E6;B4DDB6;P51991;Q8NFG3;H7C1J8;B4E036;Q66K53 B4E3E6 B4E3E6 HNRPA3;HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1000.8848 2 995.88179 1989.74903 62079.12 0.666 0.00066326 0.053733 5.3512E-05 0.71973 0.00071677 996.383626650801 1000.88561334687 47.414 0.908 47.414 46.887 47.795 0 261 62 6 0 0 0 3.6163E-29 1 18345 102.07 91.729 9 1.3012 1.4571 0 9893500 4852200 5041300 5757 614 2978 3309 9383 9383 1016 SSGVIPPLSSK 11 1 0 Phospho (STY) _S(ph)SGVIPPLSSK_ S(0.5)S(0.5)GVIPPLSSK S(0)S(0)GVIPPLS(-39.41)S(-61.61)K 0 0 1 0 REV__Q9UHG0 REV__Q9UHG0 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 580.2958 2 576.289029 1150.56351 79402.73 0.55065 0.00031733 -1.6085 -0.00092698 -1.0579 -0.00060965 576.288674942894 580.295034316032 55.369 2.6812 55.369 54.121 56.802 0 1665 215 12 0 0 0 0.0020669 4 24340 73.665 39.412 4 0.8338 1.0271 0 1948400000 1056100000 892310000 + 5758 1259 2979 3310 9384;9385;9386;9387 9387 2597;2598 SSGVIPPLSSK 11 1 0 Phospho (STY) _S(ph)SGVIPPLSSK_ S(0.499)S(0.499)GVIPPLS(0.001)SK S(0)S(0)GVIPPLS(-25.74)S(-50)K 0 0 1 0 REV__Q9UHG0 REV__Q9UHG0 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 576.2886 2 576.289029 1150.56351 80280.96 0.54647 0.00031493 -1.3624 -0.00078511 -0.81588 -0.00047018 576.288231355562 580.295272727444 57.368 1.7666 57.368 56.758 58.524 0 712 145 7 0 0 0 0.0051549 3 25276 67.169 23.183 4 0.84608 1.0497 0 113180000 58368000 54812000 + 5759 1259 2979 3310 9388;9389;9390 9389 2597;2598 SSGVIPPLSSK 11 1 0 Phospho (STY) _S(ph)SGVIPPLSSK_ S(0.498)S(0.498)GVIPPLS(0.003)SK S(0)S(0)GVIPPLS(-21.9)S(-40.84)K 0 0 1 0 REV__Q9UHG0 REV__Q9UHG0 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 580.2953 2 576.289029 1150.56351 80094.64 0.5974 0.00034428 -1.2447 -0.00071728 -0.64725 -0.000373 576.288275469081 580.295363267879 59.067 3.3808 59.067 58.366 61.747 0 865 256 6 0 0 0 0.011001 4 25995 51.066 21.257 4 0.87458 1.0895 0 73705000 41428000 32277000 + 5760 1259 2979 3310 9391;9392;9393;9394 9391 2597;2598 SSGVIPPLSSK 11 1 0 Phospho (STY) _S(ph)SGVIPPLSSK_ S(0.496)S(0.496)GVIPPLS(0.007)SK S(0)S(0)GVIPPLS(-18.31)S(-42.39)K 0 0 1 0 REV__Q9UHG0 REV__Q9UHG0 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 576.2882 2 576.289029 1150.56351 80939.26 0.61106 0.00035215 -1.5106 -0.00087052 -0.8995 -0.00051837 576.288396206852 580.295002621409 63.875 1.2583 63.875 63.36 64.618 0 234 93 5 0 0 0 0.0094751 2 30319 53.753 21.257 4 0.94 1.1872 0 30978000 17466000 13512000 + 5761 1259 2979 3310 9395;9396 9396 2597;2598 SSGVIPPLSSK 11 1 0 Phospho (STY) _S(ph)SGVIPPLSSK_ S(0.5)S(0.5)GVIPPLSSK S(0)S(0)GVIPPLS(-33.37)S(-38.57)K 0 0 1 0 REV__Q9UHG0 REV__Q9UHG0 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 580.2946 2 576.289029 1150.56351 80106.91 0.42382 0.00024424 -2.1675 -0.0012491 -1.7437 -0.0010049 576.28743838082 580.295095994992 66.761 0.31908 66.761 66.578 66.897 0 55 21 4 0 0 0 0.011584 1 32625 50.04 22.786 4 0.80645 1.0088 0 63590000 43361000 20229000 + 5762 1259 2979 3310 9397 9397 2597;2598 SSGVIPPLSSK 11 1 0 Phospho (STY) _S(ph)SGVIPPLSSK_ S(0.498)S(0.498)GVIPPLS(0.004)SK S(0)S(0)GVIPPLS(-20.88)S(-45.31)K 0 0 1 0 REV__Q9UHG0 REV__Q9UHG0 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 580.2947 2 576.289029 1150.56351 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.772 1 57.772 57.272 58.272 3.8147E-06 0 0 0 0.0032528 1 25430 53.775 6.2005 4 + 5763 1259 2979 3310 9398 9398 2597;2598 SSGVIPPLSSK 11 1 0 Phospho (STY) _S(ph)SGVIPPLSSK_ S(0.499)S(0.499)GVIPPLS(0.001)SK S(0)S(0)GVIPPLS(-25.87)S(-47.59)K 0 0 1 0 REV__Q9UHG0 REV__Q9UHG0 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 576.288 2 576.289029 1150.56351 79884.82 0.59014 0.00034009 -0.96444 -0.0005558 -0.3743 -0.0002157 576.288677372175 580.295487272489 31.803 0.86402 31.803 31.446 32.31 0 407 61 10 0 0 0 0.00797 1 16875 60.118 21.156 4 0.87573 0.58459 0 354150000 193110000 161040000 + 5764 1259 2979 3310 9399 9399 2597;2598 SSHNLAVHR 9 0 1 Unmodified _SSHNLAVHR_ 0 0 0 0 H3BTR0;A0A024R557;A0A0A6YYC7;A0A024R4Z4;A0A024R4Z1;Q96JP5 H3BTR0 H3BTR0 ZFP91-CNTF;hCG_2039447;hCG_2042749;ZFP91 E3 ubiquitin-protein ligase ZFP91 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 344.1858 3 340.849302 1019.52608 102417.3 -0.079785 -2.7195E-05 0.31545 0.00010752 0.23567 8.0327E-05 340.849310791183 344.185523990679 80.374 0.89847 80.374 80.061 80.96 0 197 83 4 0 0 0 0.015487 1 42368 37.191 27.977 1 0.56931 0.69967 0 30510000 16473000 14037000 5765 98 2980 3311 9400 9400 SSHYDELLAAEAR 13 0 1 Unmodified _SSHYDELLAAEAR_ 0 0 0 0 B2R5U1;B4E299;B3KU67;A0A140VK49;Q59FF0;I6TRR8;Q7KZF4;H7C597 B2R5U1 B2R5U1 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 491.2401 3 487.9038 1460.68957 90994.75 0.4733 0.00023092 -0.048442 -2.3635E-05 0.42486 0.00020729 487.903716843405 491.239794565151 108.08 0.71854 108.08 107.74 108.45 7.6294E-06 158 54 6 0 0 0 0.0022902 2 63201 51.726 46.119 1 1.2765 1.5511 0 20435000 10958000 9477300 5766 382 2981 3312 9401;9402 9401 SSHYDELLAAEAR 13 0 1 Unmodified _SSHYDELLAAEAR_ 0 0 0 0 B2R5U1;B4E299;B3KU67;A0A140VK49;Q59FF0;I6TRR8;Q7KZF4;H7C597 B2R5U1 B2R5U1 SND1 Staphylococcal nuclease domain-containing protein 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 736.357 2 731.352062 1460.68957 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.01 1 108.01 107.51 108.51 0 0 0 0 9.6341E-05 1 63204 67.153 49.717 1 5767 382 2981 3312 9403 9403 SSIAGSEDAEPLAPPIK 17 1 0 Phospho (STY) _SSIAGS(ph)EDAEPLAPPIK_ S(0.029)S(0.029)IAGS(0.942)EDAEPLAPPIK S(-15.12)S(-15.12)IAGS(15.12)EDAEPLAPPIK 0 0 1 0 Q03164;E9PR05;Q9HB80;H7C5W4 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 885.4286 2 881.418957 1760.82336 64460.09 1.1536 0.0010168 0.13798 0.00012162 1.2916 0.0011384 881.418840867844 885.425973943614 111.36 0.70525 111.36 111.03 111.73 -7.6294E-06 307 68 6 0 0 0 9.8768E-07 1 71588 76.85 70.687 3 1.1918 0.80661 0 25940000 12545000 13395000 5768 1034 2982 3313 9404 9404 1899 SSLEHGSDVYLLR 13 0 1 Phospho (STY) _S(ph)SLEHGSDVYLLR_ S(0.5)S(0.5)LEHGS(0.001)DVYLLR S(0)S(0)LEHGS(-29.72)DVY(-39)LLR 0 0 1 0 Q75MX6;E9PFE2;Q59FS0;Q9UHL9 Q75MX6 Q75MX6 GTF2IRD1 General transcription factor II-I repeat domain-containing protein 1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 783.3676 2 778.361245 1554.70794 NaN NaN NaN -0.82172 -0.00063959 NaN NaN NaN NaN 99.469 0.45892 99.469 99.234 99.693 0 0 0 0 0.010168 1 56714 42.3 27.156 4 NaN NaN 0 7905900 0 7905900 5769 800 2983 3314 9405 9405 1379;1380 SSLGQSASETEEDTVSVSK 19 1 0 Phospho (STY) _SSLGQSAS(ph)ETEEDTVSVSK_ S(0.008)S(0.008)LGQS(0.025)AS(0.747)ET(0.211)EEDT(0.001)VSVSK S(-19.78)S(-19.78)LGQS(-14.79)AS(5.48)ET(-5.48)EEDT(-30.4)VS(-41.3)VS(-45.67)K 0 0 1 0 E9PJ04;H0YCG1;Q7Z3K9;E9PPJ0;Q13435 E9PJ04 E9PJ04 SF3B2;DKFZp781L0540 Splicing factor 3B subunit 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1015.4419 2 1010.93335 2019.85215 63350.09 -0.077849 -7.8701E-05 0.60816 0.00061481 0.53031 0.00053611 1011.43527318294 1015.44238710302 68.428 0.55194 68.428 68.044 68.596 0 140 50 4 0 0 0 1.1434E-07 2 33820 62.966 53.433 8 0.97965 1.2269 0 26984000 15248000 11736000 5770 804 2984 3315 9406;9407 9407 1383;1384 SSLGQSASETEEDTVSVSK 19 1 0 2 Phospho (STY) _SSLGQS(ph)AS(ph)ETEEDTVSVSK_ S(0.248)S(0.29)LGQS(0.47)AS(0.837)ET(0.155)EEDT(0.001)VSVSK S(-2.85)S(-2.15)LGQS(2.15)AS(7.46)ET(-7.46)EEDT(-28.15)VS(-40.26)VS(-50.67)K 0 0 2 0 E9PJ04;H0YCG1;Q7Z3K9;E9PPJ0;Q13435 E9PJ04 E9PJ04 SF3B2;DKFZp781L0540 Splicing factor 3B subunit 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1054.9237 2 1050.91652 2099.81849 59765.24 0.45311 0.00047618 -0.42002 -0.0004414 0.033091 3.4776E-05 1050.91593045632 1054.92321213983 70.34 0.83046 70.34 69.984 70.814 -7.6294E-06 394 80 7 0 0 0 3.9145E-08 1 35033 66.152 51.121 28 0.84076 1.0673 0 40274000 25578000 14695000 5771 804 2984 3316 9408 9408 1383;1384 SSLLIEQPVK 10 1 0 Phospho (STY) _S(ph)SLLIEQPVK_ S(0.5)S(0.5)LLIEQPVK S(0)S(0)LLIEQPVK 0 0 1 0 E7EX82;Q8NDX5;A5YM43 E7EX82 E7EX82 PHC3 Polyhomeotic-like protein 3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 601.3196 2 597.312504 1192.61046 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.962 1 94.962 94.462 95.462 0 0 0 0 0.0019989 1 53265 67.113 30.048 2 5772 796 2985 3317 9409 9409 1369;1370 SSLLIEQPVK 10 1 0 Phospho (STY) _S(ph)SLLIEQPVK_ S(0.5)S(0.5)LLIEQPVK S(0)S(0)LLIEQPVK 0 0 1 0 E7EX82;Q8NDX5;A5YM43 E7EX82 E7EX82 PHC3 Polyhomeotic-like protein 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 601.3203 2 597.312504 1192.61046 81006.41 1.0307 0.00061563 0.028017 1.6735E-05 1.0587 0.00063236 597.312293162868 601.319604748409 98.186 1.1152 98.186 97.705 98.821 0 266 100 4 0 0 0 0.0072397 1 63075 62.408 30.977 2 2.5112 1.932 0 7519500 1908000 5611500 5773 796 2985 3317 9410 9410 1369;1370 SSLLVGNLK 9 1 0 Phospho (STY) _S(ph)SLLVGNLK_ S(0.5)S(0.5)LLVGNLK S(0)S(0)LLVGNLK 0 0 1 0 B3KPJ4;B4DG61;B7ZLY0;A0A0A0MSI2;Q8IXK0 B3KPJ4 B3KPJ4 PHC2 Polyhomeotic-like protein 2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 509.7747 2 505.767732 1009.52091 NaN NaN NaN 0.9301 0.00047041 NaN NaN NaN NaN 95.392 0.41216 95.392 95.092 95.504 0 0 0 0 0.011632 1 53484 51.276 21.533 2 NaN NaN 0 18778000 0 18778000 5774 294 2986 3318 9411 9411 471;472 SSLLVGNLK 9 1 0 Phospho (STY) _SS(ph)LLVGNLK_ S(0.293)S(0.707)LLVGNLK S(-3.82)S(3.82)LLVGNLK 0 0 1 0 B3KPJ4;B4DG61;B7ZLY0;A0A0A0MSI2;Q8IXK0 B3KPJ4 B3KPJ4 PHC2 Polyhomeotic-like protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 509.7747 2 505.767732 1009.52091 85883.8 0.56035 0.00028341 -0.04442 -2.2466E-05 0.51593 0.00026094 505.767689724095 509.774716033889 97.138 1.3741 97.138 96.54 97.914 -7.6294E-06 394 132 4 0 0 0 0.0068316 2 62653 62.869 44.138 2 3.3683 2.6242 0 14307000 3391700 10916000 5775 294 2986 3318 9412;9413 9413 471;472 SSPEETLNELTGR 13 0 1 Phospho (STY) _S(ph)SPEETLNELTGR_ S(0.499)S(0.499)PEET(0.002)LNELTGR S(0)S(0)PEET(-23.91)LNELT(-43.4)GR 0 0 1 0 Q5SVQ8 Q5SVQ8 Q5SVQ8 ZBTB41 Zinc finger and BTB domain-containing protein 41 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 756.8334 2 756.832518 1511.65048 NaN NaN NaN -0.57178 -0.00043274 NaN NaN NaN NaN 104.56 0.45282 104.56 104.43 104.89 -7.6294E-06 0 0 0 0.0061281 3 60671 47.288 31.626 4 NaN NaN 0 3138700 3138700 0 5776 1100 2987 3319 9414;9415;9416 9416 2082;2083 SSPEETLNELTGR 13 0 1 Phospho (STY) _S(ph)SPEETLNELTGR_ S(0.497)S(0.497)PEET(0.006)LNELTGR S(0)S(0)PEET(-19.52)LNELT(-51.33)GR 0 0 1 0 Q5SVQ8 Q5SVQ8 Q5SVQ8 ZBTB41 Zinc finger and BTB domain-containing protein 41 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 761.838 2 756.832518 1511.65048 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.48 1 104.48 103.98 104.98 0 0 0 0 0.00084436 1 60487 52.928 35.064 4 5777 1100 2987 3319 9417 9417 2082;2083 SSPEETLNELTGR 13 0 1 Phospho (STY) _S(ph)SPEETLNELTGR_ S(0.5)S(0.5)PEETLNELTGR S(0)S(0)PEET(-33.74)LNELT(-42.04)GR 0 0 1 0 Q5SVQ8 Q5SVQ8 Q5SVQ8 ZBTB41 Zinc finger and BTB domain-containing protein 41 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 761.8398 2 756.832518 1511.65048 70782.16 1.1503 0.00087056 0.63424 0.00048001 1.7845 0.0013506 756.832652873455 761.837395568735 110.58 1.0525 110.58 110.19 111.24 0 173 97 3 0 0 0 0.0089501 1 71226 42.041 27.362 4 2.5295 2.0029 0 10375000 3061800 7313500 5778 1100 2987 3319 9418 9418 2082;2083 SSPEGPDPPVLTEVSK 16 1 0 Phospho (STY) _S(ph)SPEGPDPPVLTEVSK_ S(0.5)S(0.5)PEGPDPPVLTEVSK S(0)S(0)PEGPDPPVLT(-64.86)EVS(-70.88)K 0 0 1 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 863.9036 2 859.897857 1717.78116 67271.21 0.95755 0.0008234 0.29911 0.0002572 1.2567 0.0010806 859.898209260709 863.905002757817 97.701 0.9547 97.701 97.289 98.243 -7.6294E-06 357 79 6 0 0 0 6.9545E-06 1 55167 72.315 64.183 4 0.88409 1.121 0 35186000 18895000 16291000 5779 1034 2988 3320 9419 9419 1900;1901 SSPEGPDPPVLTEVSK 16 1 0 Phospho (STY) _S(ph)SPEGPDPPVLTEVSK_ S(0.5)S(0.5)PEGPDPPVLTEVSK S(0)S(0)PEGPDPPVLT(-41.72)EVS(-42.38)K 0 0 1 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 859.8983 2 859.897857 1717.78116 66685.4 1.0538 0.00090614 0.0087213 7.4994E-06 1.0625 0.00091364 859.89790215845 863.904840436804 102.79 0.7341 102.79 102.41 103.15 0 375 71 7 0 0 0 0.00091133 1 66140 42.382 42.382 4 2.16 1.4278 0 29852000 10107000 19746000 5780 1034 2988 3320 9420 9420 1900;1901 SSPELEDTATSSK 13 1 0 Phospho (STY) _S(ph)SPELEDTATSSK_ S(0.5)S(0.5)PELEDTATSSK S(0)S(0)PELEDT(-89.74)AT(-98.45)S(-104.65)S(-108.93)K 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 720.3062 2 716.297976 1430.5814 72574.29 0.72623 0.0005202 0.16646 0.00011924 0.89269 0.00063943 716.298072309717 720.305125818609 44.563 1.6131 44.562 43.777 45.39 -3.8147E-06 732 117 10 0 0 0 4.7371E-15 3 16268 118.73 108.42 6 1.686 2.1077 0 65063000 24369000 40694000 5781 994 2989 3321 9421;9422;9423 9422 1794;1795 SSPELEDTATSSK 13 1 0 Phospho (STY) _S(ph)SPELEDTATSSK_ S(0.5)S(0.5)PELEDTATSSK S(0)S(0)PELEDT(-52.4)AT(-59.43)S(-62.2)S(-61.89)K 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 720.3056 2 716.297976 1430.5814 72649.2 1.0228 0.00073264 0.32012 0.0002293 1.3429 0.00096193 716.29813700624 720.305226179362 34.735 0.93375 34.735 34.429 35.363 0 414 71 9 0 0 0 0.0032114 1 19203 66.267 60.941 6 2.8434 1.8969 0 110030000 30290000 79737000 5782 994 2989 3321 9424 9424 1794;1795 SSPFKVSPLTFGR 13 1 1 2 Phospho (STY) _SS(ph)PFKVS(ph)PLTFGR_ S(0.467)S(0.541)PFKVS(0.934)PLT(0.058)FGR S(-0.66)S(0.66)PFKVS(12.1)PLT(-12.1)FGR 0 0 2 1 A8K2W3;O95810 A8K2W3 A8K2W3 SDPR Serum deprivation-response protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 800.8696 2 791.856957 1581.69936 68809.13 1.0402 0.00082366 -0.0048211 -3.8176E-06 1.0353 0.00081984 791.856757914152 800.868044542083 117.75 0.54028 117.75 117.53 118.07 0 161 48 5 0 0 0 0.0036705 1 70552 44.252 33.087 6 0.87999 0.96946 0 12382000 6724500 5657400 5783 451 2990 3322 9425 9425 783;784 SSPGIHLER 9 0 1 Phospho (STY) _S(ph)SPGIHLER_ S(0.5)S(0.5)PGIHLER S(0)S(0)PGIHLER 0 0 1 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 543.2552 2 538.250238 1074.48592 83336.16 0.55447 0.00029844 0.013113 7.0581E-06 0.56758 0.0003055 538.250253936484 543.254369404754 67.672 0.69537 67.672 67.491 68.187 0 175 56 5 0 0 0 0.018737 1 33282 47.198 36.784 2 0.60967 0.7675 0 50650000 28963000 21688000 5784 1059 2991 3323 9426 9426 1982;1983 SSPGQTPEEGAQALAEFAALHGPALR 26 0 1 Phospho (STY) _S(ph)SPGQTPEEGAQALAEFAALHGPALR_ S(0.495)S(0.495)PGQT(0.01)PEEGAQALAEFAALHGPALR S(0)S(0)PGQT(-17.06)PEEGAQALAEFAALHGPALR 0 0 1 0 Q9BR23;A0A024R4U3;Q14166 Q9BR23 Q9BR23 TTLL12 Tubulin--tyrosine ligase-like protein 12 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 899.0989 3 895.760463 2684.25956 64969.79 0.8843 0.00079212 0.015661 1.4029E-05 0.89996 0.00080615 896.429158241566 899.430930310576 129.92 1.0495 129.92 129.41 130.46 0 549 96 8 0 0 0 4.1657E-06 2 79274 41.133 35.244 3 1.2582 1.5478 0 23404000 10745000 12659000 5785 93 2992 3324 9427;9428 9428 120;121 SSPGQTPEEGAQALAEFAALHGPALR 26 0 1 Phospho (STY) _S(ph)SPGQTPEEGAQALAEFAALHGPALR_ S(0.497)S(0.497)PGQT(0.005)PEEGAQALAEFAALHGPALR S(0)S(0)PGQT(-19.82)PEEGAQALAEFAALHGPALR 0 0 1 0 Q9BR23;A0A024R4U3;Q14166 Q9BR23 Q9BR23 TTLL12 Tubulin--tyrosine ligase-like protein 12 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 896.0956 3 895.760463 2684.25956 64174.83 1.1223 0.0010054 -1.6882 -0.0015122 -0.56583 -0.00050685 896.093608739505 899.428692046023 134.51 0.30077 134.51 134.38 134.68 0 95 15 12 0 0 0 3.3679E-09 2 86780 48.489 48.489 3 1.0796 0.77417 0 28474000 13958000 14516000 5786 93 2992 3324 9429;9430 9429 120;121 SSPQAAVPYK 10 1 0 Phospho (STY) _S(ph)SPQAAVPYK_ S(0.5)S(0.5)PQAAVPYK S(0)S(0)PQAAVPY(-67.44)K 0 0 1 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 564.2611 2 564.260272 1126.50599 80731.15 0.70535 0.000398 0.26635 0.00015029 0.9717 0.00054829 564.260358432677 568.267488170609 55.906 1.5549 55.906 55.138 56.693 0 650 125 8 0 0 0 0.0018397 4 23803 74.562 63.202 3 0.58041 0.72014 0 112020000 69085000 42936000 5787 552 2993 3325 9431;9432;9433;9434 9431 916;917 SSPQAAVPYK 10 1 0 Phospho (STY) _S(ph)SPQAAVPYK_ S(0.5)S(0.5)PQAAVPYK S(0)S(0)PQAAVPY(-61.03)K 0 0 1 0 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 568.2682 2 564.260272 1126.50599 79888.37 0.46864 0.00026444 0.00091533 5.1648E-07 0.46956 0.00026495 564.260379133796 568.267441420928 48.462 1.3286 48.462 47.982 49.31 0 575 123 8 0 0 0 0.0064036 2 28836 64.439 54.452 3 1.9502 1.297 0 90687000 31001000 59686000 5788 552 2993 3325 9435;9436 9435 916;917 SSPQAAVPYKK 11 2 0 Phospho (STY) _S(ph)SPQAAVPYKK_ S(0.5)S(0.5)PQAAVPYKK S(0)S(0)PQAAVPY(-48.14)KK 0 0 1 1 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 636.3228 2 628.307753 1254.60095 78102.45 0.60485 0.00038003 0.12179 7.652E-05 0.72664 0.00045655 628.307632241727 636.321955968211 54.892 1.2243 54.892 54.353 55.578 -3.8147E-06 341 95 6 0 0 0 0.004202 2 23231 53.08 47.299 3 0.61046 0.69861 0 19256000 11226000 8029900 5789 552 2994 3326 9437;9438 9437 916;917 SSPQAAVPYKK 11 2 0 Phospho (STY) _S(ph)SPQAAVPYKK_ S(0.5)S(0.5)PQAAVPYKK S(0)S(0)PQAAVPY(-85.49)KK 0 0 1 1 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 Q6DHZ8 ADNP Activity-dependent neuroprotector homeobox protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 628.3087 2 628.307753 1254.60095 76096.93 0.96117 0.00060391 -0.21556 -0.00013544 0.74561 0.00046847 628.30762125297 636.321751088883 27.71 0.557 27.71 27.528 28.085 0 217 36 10 0 0 0 4.3065E-05 2 13622 90.434 77.397 3 2.1625 1.6032 0 196150000 62163000 133990000 5790 552 2994 3326 9439;9440 9439 916;917 SSPSILAVQR 10 0 1 Phospho (STY) _SS(ph)PSILAVQR_ S(0.022)S(0.978)PSILAVQR S(-16.4)S(16.4)PS(-49.42)ILAVQR 0 0 1 0 O14646;Q7Z4M7 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 569.2873 2 569.286821 1136.55909 81366.14 0.61661 0.00035103 -0.05971 -3.3992E-05 0.5569 0.00031704 569.286723214936 574.290950288743 81.206 1.6917 81.206 80.362 82.054 0 720 155 7 0 0 0 1.7645E-07 3 42853 123.96 105.18 3 0.63142 0.79755 0 123630000 72292000 51340000 5791 919 2995 3327 9441;9442;9443 9441 1546 SSPSVLIHSLGK 12 1 0 Phospho (STY) _S(ph)SPSVLIHSLGK_ S(0.499)S(0.499)PS(0.003)VLIHSLGK S(0)S(0)PS(-22.48)VLIHS(-57.69)LGK 0 0 1 0 B4DNL3;Q9P0K7 B4DNL3 B4DNL3 RAI14 Ankycorbin ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 656.8424 2 652.834135 1303.65372 NaN NaN NaN 0.82107 0.00053602 NaN NaN NaN NaN 101.08 0.89278 101.08 100.51 101.4 0 0 0 0 0.0024585 1 57730 64.82 48.044 4 NaN NaN 0 11286000 0 11286000 5792 647 2996 3328 9444 9444 1075;1076;1077 SSPSVLIHSLGK 12 1 0 2 Phospho (STY) _SS(ph)PSVLIHS(ph)LGK_ S(0.465)S(0.532)PS(0.003)VLIHS(0.999)LGK S(-0.58)S(0.58)PS(-23.1)VLIHS(31.37)LGK 0 0 2 0 B4DNL3;Q9P0K7 B4DNL3 B4DNL3 RAI14 Ankycorbin ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 696.8246 2 692.8173 1383.62005 NaN NaN NaN -0.37113 -0.00025713 NaN NaN NaN NaN 99.902 1.1069 99.902 99.444 100.55 0 0 0 0 0.0040564 1 64170 49.463 41.359 6 NaN NaN 0 5443700 0 5443700 5793 647 2996 3329 9445 9445 1075;1076;1077 SSSEDAESLAPR 12 0 1 Phospho (STY) _S(ph)SSEDAESLAPR_ S(0.418)S(0.418)S(0.164)EDAESLAPR S(0)S(0)S(-4.06)EDAES(-53.99)LAPR 0 0 1 0 Q4G0J3;H0YA82 Q4G0J3 Q4G0J3 LARP7 La-related protein 7 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 669.7767 2 664.771929 1327.5293 76254.81 1.0071 0.00066951 -0.24163 -0.00016063 0.7655 0.00050888 664.771841985774 669.776120796267 49.634 0.86668 49.634 49.226 50.093 3.8147E-06 316 84 5 0 0 0 0.0060842 2 29893 64.224 59.441 4 0.76767 0.58805 0 17727000 10069000 7658500 5794 1085 2997 3330 9446;9447 9446 2045;2046 SSSHDSGTDITSVTLGDTTAVK 22 1 0 Unmodified _SSSHDSGTDITSVTLGDTTAVK_ 0 0 0 0 Q03164;E9PR05;Q9HB80 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 730.0236 3 727.016877 2178.0288 75572.98 1.0164 0.00073891 0.068732 4.9969E-05 1.0851 0.00078888 727.01703223625 729.688384451611 87.086 0.37951 87.086 86.861 87.241 0 121 36 6 0 0 0 0.024693 1 55994 15.546 7.8338 1 1.4771 1.0899 0 8788800 4070300 4718500 5795 1034 2998 3331 9448 9448 SSSHLSPSEEVR 12 0 1 Phospho (STY) _SSSHLS(ph)PSEEVR_ SSSHLS(0.996)PS(0.004)EEVR S(-47.69)S(-47.69)S(-41.5)HLS(23.64)PS(-23.64)EEVR 0 0 1 0 Q5VWN6 Q5VWN6 Q5VWN6 FAM208B Protein FAM208B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 697.8007 2 697.80102 1393.58749 73136.77 0.78348 0.00054671 0.36136 0.00025216 1.1448 0.00079887 697.800888807352 702.805030085197 58.778 0.93533 58.778 58.252 59.187 0 370 73 8 0 0 0 2.6231E-09 1 25975 102.73 86.79 5 0.95763 1.2064 0 56226000 28718000 27507000 5796 1113 2999 3332 9449 9449 2109 SSSHLSPSEEVR 12 0 1 Phospho (STY) _SSSHLS(ph)PSEEVR_ SSSHLS(0.968)PS(0.032)EEVR S(-50.64)S(-50.64)S(-41.02)HLS(14.83)PS(-14.83)EEVR 0 0 1 0 Q5VWN6 Q5VWN6 Q5VWN6 FAM208B Protein FAM208B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 697.8022 2 697.80102 1393.58749 71951.05 0.96608 0.00067413 -0.33775 -0.00023569 0.62833 0.00043845 697.801166630966 702.805006423094 30.551 1.2124 30.551 30.158 31.371 0 417 88 10 0 0 0 0.0015514 1 16063 74.987 60.634 5 1.8107 1.2025 0 182200000 65097000 117110000 5797 1113 2999 3332 9450 9450 2109 SSSPAPADIAQTVQEDLR 18 0 1 Phospho (STY) _SSS(ph)PAPADIAQTVQEDLR_ S(0.12)S(0.12)S(0.759)PAPADIAQTVQEDLR S(-8)S(-8)S(8)PAPADIAQT(-57.62)VQEDLR 0 0 1 0 B7Z8K4;Q6FI03;Q5U0Q1;Q53HH4;Q32P45;Q13283 B7Z8K4 B7Z8K4 G3BP;DKFZp686L1159;G3BP1 Ras GTPase-activating protein-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 982.9519 2 982.951684 1963.88881 60833.37 0.58981 0.00057975 2.806 0.0027582 3.3958 0.0033379 982.95185543434 988.963249393332 118.36 0.87521 118.36 117.95 118.82 7.6294E-06 656 75 12 0 0 0 9.3817E-07 2 70828 70.942 70.942 4 1.6515 2.088 0 213800000 70618000 143180000 5798 716 3000 3333 9451;9452 9451 1188 SSSPAPEFLASSPPDNK 17 1 0 Phospho (STY) _SSSPAPEFLASS(ph)PPDNK_ SSSPAPEFLAS(0.144)S(0.856)PPDNK S(-77.24)S(-77.24)S(-76.7)PAPEFLAS(-7.75)S(7.75)PPDNK 0 0 1 0 C9JME2;Q9Y4F1;M0QXT1 C9JME2 C9JME2 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 909.9072 2 905.898389 1809.78222 64951 1.0297 0.00093278 0.046218 4.1868E-05 1.0759 0.00097465 905.898495470388 909.905770359973 92.519 0.89204 92.519 92.026 92.918 0 231 79 4 0 0 0 1.8655E-12 2 51290 98.507 79.762 5 1.3761 1.7277 0 28077000 13038000 15039000 5799 744 3001 3334 9453;9454 9453 1256 SSSPIPLTPSK 11 1 0 Phospho (STY) _SSS(ph)PIPLTPSK_ S(0.195)S(0.195)S(0.609)PIPLTPSK S(-4.94)S(-4.94)S(4.94)PIPLT(-32.3)PS(-36.13)K 0 0 1 0 Q8N5Y2 Q8N5Y2 Q8N5Y2 MSL3 Male-specific lethal 3 homolog MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 597.2939 2 597.294311 1192.57407 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.558 1 75.558 75.058 76.058 0 0 0 0 0.014696 1 38929 42.083 29.495 5 5800 1151 3002 3335 9455 9455 2224 SSSPIPLTPSK 11 1 0 Phospho (STY) _SSS(ph)PIPLTPSK_ S(0.032)S(0.032)S(0.936)PIPLTPSK S(-14.65)S(-14.65)S(14.65)PIPLT(-37.15)PS(-42.01)K 0 0 1 0 Q8N5Y2 Q8N5Y2 Q8N5Y2 MSL3 Male-specific lethal 3 homolog MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 597.2957 2 597.294311 1192.57407 79559.44 1.013 0.00060506 0.18166 0.00010851 1.1947 0.00071357 597.294478385639 601.30143713817 74.515 1.333 74.515 73.849 75.182 0 510 118 6 0 0 0 0.0088381 1 47443 56.359 38.024 5 1.1422 0.87003 0 17907000 8138700 9768500 5801 1151 3002 3335 9456 9456 2224 SSSPPILTKPTLK 13 2 0 Phospho (STY) _SSS(ph)PPILTKPTLK_ S(0.047)S(0.047)S(0.904)PPILT(0.002)KPT(0.001)LK S(-12.85)S(-12.85)S(12.85)PPILT(-27.2)KPT(-32.3)LK 0 0 1 1 A5PKX7;Q92794;C9K0F9 A5PKX7 A5PKX7 MYST3;KAT6A Histone acetyltransferase;Histone acetyltransferase KAT6A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 488.9395 3 483.596859 1447.76875 87752.04 0.62777 0.00030359 -0.24547 -0.00011871 0.38231 0.00018488 483.596600145346 488.93948789257 82.27 0.51096 82.27 81.993 82.504 0 151 45 6 0 0 0 0.0034803 2 52652 41.86 41.86 5 2.6079 2.1642 0 15581000 4580900 11000000 5802 423 3003 3336 9457;9458 9457 733 SSSPRGEASSLNGESH 16 0 1 Phospho (STY) _S(ph)SSPRGEASSLNGESH_ S(0.332)S(0.332)S(0.287)PRGEAS(0.047)S(0.003)LNGESH S(0)S(0)S(-0.63)PRGEAS(-8.49)S(-20.97)LNGES(-46.26)H 0 0 1 1 Q8IY57 Q8IY57 Q8IY57 YAF2 YY1-associated factor 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 561.5673 3 561.231967 1680.67407 80240.71 0.21587 0.00012115 0.50687 0.00028447 0.72274 0.00040563 561.232188586803 564.568310162797 24.082 0.5169 24.082 23.8 24.317 1.9073E-06 169 30 7 0 0 0 0.00011117 1 10388 48.177 43.547 6 1.088 0.81879 0 20436000 9032900 11403000 5803 1147 3004 3337 9459 9459 2198;2199 SSSPTAGPSTEGAEGPEEK 19 1 0 Phospho (STY) _SSS(ph)PTAGPSTEGAEGPEEK_ S(0.151)S(0.151)S(0.659)PT(0.036)AGPS(0.001)T(0.001)EGAEGPEEK S(-6.39)S(-6.39)S(6.39)PT(-12.57)AGPS(-29.48)T(-29.05)EGAEGPEEK 0 0 1 0 A0A0C4DGG3;B7ZB05;B4DSN4;Q8NHM5 A0A0C4DGG3 A0A0C4DGG3 KDM2B Lysine-specific demethylase 2B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 953.3965 2 949.388582 1896.76261 63037.78 0.75706 0.00071874 -0.014057 -1.3345E-05 0.743 0.00070539 949.388577011802 953.395578958869 40.25 0.98733 40.25 39.766 40.753 0 630 90 9 0 0 0 3.1507E-05 1 14075 51.487 45.881 6 0.77554 0.94446 0 18359000 9825400 8533700 5804 323 3005 3338 9460 9460 507 SSSPTAGPSTEGAEGPEEK 19 1 0 Phospho (STY) _SSS(ph)PTAGPSTEGAEGPEEK_ S(0.121)S(0.121)S(0.637)PT(0.121)AGPSTEGAEGPEEK S(-7.21)S(-7.21)S(7.21)PT(-7.21)AGPS(-31.83)T(-34.72)EGAEGPEEK 0 0 1 0 A0A0C4DGG3;B7ZB05;B4DSN4;Q8NHM5 A0A0C4DGG3 A0A0C4DGG3 KDM2B Lysine-specific demethylase 2B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 949.3897 2 949.388582 1896.76261 61980.03 0.80243 0.00076182 0.13897 0.00013194 0.9414 0.00089375 949.388190938715 953.39585465887 31.373 0.77193 31.373 31.003 31.775 0 328 54 9 0 0 0 5.8575E-07 2 16635 59.512 46.504 6 1.2163 0.81061 0 103440000 47986000 55449000 5805 323 3005 3338 9461;9462 9462 507 SSSPVTELASR 11 0 1 Phospho (STY) _SSS(ph)PVTELASR_ S(0.015)S(0.012)S(0.974)PVTELASR S(-18.26)S(-19.28)S(18.26)PVT(-37.44)ELAS(-53.32)R 0 0 1 0 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 612.2803 2 607.27665 1212.53875 78456.53 0.57489 0.00034912 -0.022547 -1.3692E-05 0.55234 0.00033542 607.27665024039 612.2806821191 67.972 1.0107 67.972 67.434 68.444 0 390 84 6 0 0 0 0.0021774 3 33300 72.958 54.822 5 0.90256 1.1399 0 118350000 64505000 53841000 5806 383 3006 3339 9463;9464;9465 9463 639;640 SSSPVTELASR 11 0 1 Phospho (STY) _SSS(ph)PVTELASR_ S(0.008)S(0.008)S(0.981)PVT(0.003)ELASR S(-20.86)S(-20.86)S(20.86)PVT(-25.86)ELAS(-47.58)R 0 0 1 0 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 607.278 2 607.27665 1212.53875 78121.74 0.91478 0.00055552 0.18027 0.00010947 1.095 0.000665 607.276759398035 612.280713972808 64.208 1.6576 64.208 63.121 64.778 0 643 147 6 0 0 0 0.007503 2 40239 62.14 45.198 5 0.66914 0.4614 0 44255000 26742000 17512000 5807 383 3006 3339 9466;9467 9467 639;640 SSSPVTELASR 11 0 1 2 Phospho (STY) _SS(ph)S(ph)PVTELASR_ S(0.515)S(0.589)S(0.893)PVT(0.002)ELASR S(-0.73)S(0.73)S(6.63)PVT(-28.15)ELAS(-45.42)R 0 0 2 0 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 652.2654 2 647.259815 1292.50508 NaN NaN NaN -0.10113 -6.5455E-05 NaN NaN NaN NaN 76.565 0.74324 76.565 76.269 77.012 7.6294E-06 0 0 0 0.0072661 1 39555 47.915 25.683 10 NaN NaN 0 12825000 0 12825000 5808 383 3006 3340 9468 9468 639;640 SSSVGSSSSYPISPAVSR 18 0 1 Phospho (STY) _SSSVGSSSSYPIS(ph)PAVSR_ SSSVGSSSS(0.004)YPIS(0.987)PAVS(0.009)R S(-49.7)S(-49.7)S(-46.8)VGS(-48.37)S(-42.83)S(-37.24)S(-24.14)Y(-45.65)PIS(20.23)PAVS(-20.23)R 0 0 1 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 922.9188 2 917.91457 1833.81459 64344.78 0.49614 0.00045542 0.10294 9.4488E-05 0.59908 0.00054991 917.914898063843 922.918809979124 77.229 0.85982 77.229 76.865 77.725 0 263 74 5 0 0 0 2.1868E-17 2 40163 104.88 88.628 10 1.0244 1.2887 0 45907000 21406000 24501000 5809 1070 3007 3341 9469;9470 9470 2019;2020;2021;2022;2023 SSSVGSSSSYPISPAVSR 18 0 1 Phospho (STY) _S(ph)SSVGSSSSYPISPAVSR_ S(0.351)S(0.351)S(0.296)VGS(0.001)SSSYPISPAVSR S(0)S(0)S(-0.73)VGS(-24.25)S(-33)S(-41.49)S(-49.67)Y(-57.9)PIS(-71.47)PAVS(-79.88)R 0 0 1 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 922.9203 2 917.91457 1833.81459 65025.34 0.53785 0.0004937 0.34417 0.00031592 0.88202 0.00080962 918.41517715068 922.919518282575 81.147 0.82628 81.147 80.685 81.512 0 261 76 6 0 0 0 1.7993E-10 2 42898 84.874 70.616 10 1.2594 1.5548 0 32930000 14963000 17966000 5810 1070 3007 3341 9471;9472 9471 2019;2020;2021;2022;2023 SSSVGSSSSYPISPAVSR 18 0 1 Phospho (STY) _SSSVGSS(ph)SSYPISPAVSR_ S(0.151)S(0.151)S(0.151)VGS(0.217)S(0.253)S(0.034)S(0.039)Y(0.002)PISPAVSR S(-2.23)S(-2.23)S(-2.23)VGS(-0.66)S(0.66)S(-8.66)S(-8.09)Y(-20.07)PIS(-30.93)PAVS(-35.07)R 0 0 1 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 922.9191 2 917.91457 1833.81459 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.982 1 81.982 81.482 82.482 7.6294E-06 0 0 0 0.0036767 1 43735 40.179 29.392 10 5811 1070 3007 3341 9473 9473 2019;2020;2021;2022;2023 SSSVGSSSSYPISPAVSR 18 0 1 Phospho (STY) _S(ph)SSVGSSSSYPISPAVSR_ S(0.31)S(0.31)S(0.31)VGS(0.051)S(0.008)S(0.008)S(0.002)YPISPAVSR S(0)S(0)S(0)VGS(-7.82)S(-15.92)S(-15.92)S(-23.11)Y(-30.6)PIS(-40.44)PAVS(-45.29)R 0 0 1 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 922.9187 2 917.91457 1833.81459 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.036 1 82.036 81.536 82.536 0 0 0 0 0.0013877 1 43773 50.608 38.742 10 5812 1070 3007 3341 9474 9474 2019;2020;2021;2022;2023 SSSVGSSSSYPISPAVSR 18 0 1 2 Phospho (STY) _SSS(ph)VGSSSSYPIS(ph)PAVSR_ S(0.285)S(0.33)S(0.383)VGS(0.001)SS(0.002)S(0.027)Y(0.005)PIS(0.941)PAVS(0.025)R S(-1.29)S(-0.65)S(0.65)VGS(-25.87)S(-30.61)S(-28.04)S(-15.42)Y(-23.43)PIS(15.42)PAVS(-15.78)R 0 0 2 0 Q15149;D3DWL0;Q96IE3 Q15149 Q15149 PLEC;PLEC1 Plectin MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 962.9026 2 957.897735 1913.78092 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.329 1 82.329 81.829 82.829 0 0 0 0 2.2175E-08 1 43983 74.698 63.486 45 5813 1070 3007 3342 9475 9475 2019;2020;2021;2022;2023 SSTDFSELEQPR 12 0 1 Phospho (STY) _S(ph)STDFSELEQPR_ S(0.333)S(0.333)T(0.333)DFS(0.001)ELEQPR S(0)S(0)T(0)DFS(-27.77)ELEQPR 0 0 1 0 A0A024RAC0;Q86V48 A0A024RAC0 A0A024RAC0 LUZP1 Leucine zipper protein 1 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 743.3115 2 738.306136 1474.59772 NaN NaN NaN 0.4645 0.00034294 NaN NaN NaN NaN 84.334 0.87766 84.334 83.954 84.832 0 0 0 0 0.0022746 1 54091 62.303 54.704 4 NaN NaN 0 22433000 0 22433000 5814 180 3008 3343 9476 9476 284;285;2655 SSTFSDVEAHFR 12 0 1 Unmodified _SSTFSDVEAHFR_ 0 0 0 0 Q8ND82 Q8ND82 Q8ND82 ZNF280C Zinc finger protein 280C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 465.2194 3 461.549357 1381.62624 91041.35 0.32568 0.00015032 -0.71468 -0.00032986 -0.38901 -0.00017955 461.549014016082 464.885161065204 106.4 0.43636 106.4 106.26 106.69 0 88 29 6 0 0 0 0.012034 1 61925 34.685 23.779 1 1.0155 1.1814 0 12848000 6422800 6425500 5815 1159 3009 3344 9477 9477 SSTPLPTISSSAENTR 16 0 1 Phospho (STY) _SSTPLPTISS(ph)SAENTR_ SSTPLPTIS(0.004)S(0.646)S(0.349)AENT(0.001)R S(-99.64)S(-99.64)T(-88.23)PLPT(-56.24)IS(-22.36)S(2.67)S(-2.67)AENT(-26.84)R 0 0 1 0 P42166;A0A024RBH7;Q59G12;A0A024RBE7;P42167;G5E972;H0YJH7 P42166;A0A024RBE7 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 864.8987 2 864.396013 1726.77747 65511.95 0.5492 0.00047473 -0.20275 -0.00017525 0.34645 0.00029947 864.395907307171 869.399547553583 84.651 1.2611 84.651 84.03 85.291 0 498 113 6 0 0 0 4.2134E-37 4 45763 136.63 117.24 8 0.66105 0.83358 0 63951000 35667000 28284000 5816 989;196 3010 3345 9478;9479;9480;9481 9480 309;2658 SSTPLPTISSSAENTR 16 0 1 Phospho (STY) _SST(ph)PLPTISSSAENTR_ S(0.152)S(0.152)T(0.696)PLPTISSSAENTR S(-6.6)S(-6.6)T(6.6)PLPT(-54.2)IS(-63)S(-65.76)S(-65.63)AENT(-65.63)R 0 0 1 0 P42166;A0A024RBH7;Q59G12;A0A024RBE7;P42167;G5E972;H0YJH7 P42166;A0A024RBE7 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 869.4003 2 864.396013 1726.77747 NaN NaN NaN -0.32626 -0.00028202 NaN NaN NaN NaN 77.474 0.72127 77.474 77.134 77.855 0 0 0 0 5.1E-06 1 40229 69.729 49.066 8 NaN NaN 0 16318000 0 16318000 5817 989;196 3010 3345 9482 9482 309;2658 SSTPLPTISSSAENTR 16 0 1 Phospho (STY) _SSTPLPTISS(ph)SAENTR_ SSTPLPT(0.002)IS(0.131)S(0.433)S(0.302)AENT(0.131)R S(-39.28)S(-39.28)T(-39.28)PLPT(-22.74)IS(-5.2)S(1.57)S(-1.57)AENT(-5.2)R 0 0 1 0 P42166;A0A024RBH7;Q59G12;A0A024RBE7;P42167;G5E972;H0YJH7 P42166;A0A024RBE7 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 864.3966 2 864.396013 1726.77747 64078.8 1.0097 0.00087275 0.31716 0.00027415 1.3268 0.0011469 864.395737513487 869.400570236881 87.072 0.92847 87.072 86.725 87.653 0 493 86 8 0 0 0 0.00029968 1 55867 47.904 38.471 8 0.70244 0.47675 0 61821000 34220000 27601000 5818 989;196 3010 3345 9483 9483 309;2658 SSTPPGESYFGVSSLQLK 18 1 0 Phospho (STY) _S(ph)STPPGESYFGVSSLQLK_ S(0.332)S(0.332)T(0.332)PPGES(0.002)Y(0.002)FGVSSLQLK S(0)S(0)T(0)PPGES(-22.66)Y(-22.2)FGVS(-33.04)S(-32.69)LQLK 0 0 1 0 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 982.9584 2 982.456071 1962.89759 61869.09 0.45477 0.00044679 -0.0027023 -2.6549E-06 0.45206 0.00044413 982.957486017588 986.463157098077 120.16 0.75796 120.16 119.81 120.56 -7.6294E-06 445 70 9 0 0 0 0.00037521 1 72139 42.785 34.68 7 1.2564 1.5624 0 83873000 37311000 46562000 5819 383 3011 3346 9484 9484 641;642;2705 SSTPPGESYFGVSSLQLK 18 1 0 Phospho (STY) _S(ph)STPPGESYFGVSSLQLK_ S(0.333)S(0.333)T(0.333)PPGESYFGVSSLQLK S(0)S(0)T(0)PPGES(-29.56)Y(-31.27)FGVS(-39.64)S(-39.52)LQLK 0 0 1 0 A0A140VK53;Q9UQ35;O60382 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 986.4652 2 982.456071 1962.89759 62145.11 0.50321 0.00049438 -0.056218 -5.5232E-05 0.44699 0.00043915 982.957061500303 986.463247857833 128.45 0.67734 128.45 128.15 128.83 0 376 59 8 0 0 0 0.00033061 1 82822 43.184 43.184 7 1.1655 0.77837 0 27962000 12228000 15734000 5820 383 3011 3346 9485 9485 641;642;2705 SSVHHSSIPR 10 0 1 Unmodified _SSVHHSSIPR_ 0 0 0 0 B4DZL4;A0A024RCG4;Q92674 B4DZL4 B4DZL4 FSHPRH1;CENPI Centromere protein I MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 369.5281 3 369.528228 1105.56285 100465.5 -0.29665 -0.00010962 0.053586 1.9802E-05 -0.24307 -8.982E-05 369.528131698729 372.864296890841 84.011 0.81763 84.011 83.586 84.403 0 168 76 4 0 0 0 0.0048322 1 44932 51.436 39.843 1 0.67809 0.83418 0 24746000 16232000 8513800 5821 210 3012 3347 9486 9486 SSVKTPETVVPTAPELQASASTDQPVTSEPTSR 33 1 1 Phospho (STY) _S(ph)SVKTPETVVPTAPELQASASTDQPVTSEPTSR_ S(0.322)S(0.322)VKT(0.322)PET(0.026)VVPT(0.004)APELQAS(0.003)AS(0.001)T(0.001)DQPVTSEPTSR S(0)S(0)VKT(0)PET(-10.86)VVPT(-18.78)APELQAS(-20.94)AS(-26.52)T(-26.52)DQPVT(-35.52)S(-38.55)EPT(-40.06)S(-40.06)R 0 0 1 1 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1160.2313 3 1159.8926 3476.65597 NaN NaN NaN 0.092307 0.00010707 NaN NaN NaN NaN 103.24 0.49771 103.24 103.02 103.52 0 0 0 0 2.6209E-07 1 59509 40.056 30.429 12 NaN NaN 0 20417000 20417000 0 5822 1059 3013 3348 9487 9487 1984;1985;2926 STAGDTHLGGEDFDNR 16 0 1 Unmodified _STAGDTHLGGEDFDNR_ 0 0 0 0 Q53HF2;E9PKE3;V9HW22;Q53GZ6;P11142;E9PN89;Q96IS6;B3KTV0;A0A024R6B5;P54652 Q53HF2 Q53HF2 HSPA8;HEL-S-72p;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 564.58 3 564.580045 1690.71831 80489.3 0.47302 0.00026706 -0.22177 -0.00012521 0.25124 0.00014185 564.579911551352 567.916024984534 73.962 1.3319 73.962 73.187 74.519 0 688 114 7 0 0 0 2.3821E-44 3 37874 124.78 105.17 1 1.3528 1.7095 0 163470000 77244000 86227000 5823 810 3014 3349 9488;9489;9490 9490 STAGDTHLGGEDFDNR 16 0 1 Unmodified _STAGDTHLGGEDFDNR_ 0 0 0 0 Q53HF2;E9PKE3;V9HW22;Q53GZ6;P11142;E9PN89;Q96IS6;B3KTV0;A0A024R6B5;P54652 Q53HF2 Q53HF2 HSPA8;HEL-S-72p;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 851.3708 2 846.366429 1690.71831 67374.4 0.50058 0.00042367 -0.20292 -0.00017174 0.29766 0.00025193 846.86744193773 851.370537171766 73.851 0.895 73.851 73.441 74.336 0 272 76 5 0 0 0 4.7701E-11 3 37973 95.417 79.846 1 1.4596 1.8051 0 33784000 13928000 19856000 5824 810 3014 3349 9491;9492;9493 9493 STAGDTHLGGEDFDNR 16 0 1 Unmodified _STAGDTHLGGEDFDNR_ 0 0 0 0 Q53HF2;E9PKE3;V9HW22;Q53GZ6;P11142;E9PN89;Q96IS6;B3KTV0;A0A024R6B5;P54652 Q53HF2 Q53HF2 HSPA8;HEL-S-72p;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 567.917 3 564.580045 1690.71831 81785.3 0.63239 0.00035703 0.066232 3.7393E-05 0.69862 0.00039443 564.580201281142 567.916164729106 38.738 1.2379 38.738 38.238 39.476 0 407 108 6 0 0 0 0.00021374 1 22524 44.005 31.128 1 1.3821 1.0973 0 11024000 3632000 7392400 5825 810 3014 3349 9494 9494 STDEYSEADEEEEEEEGKPSR 21 1 1 Unmodified _STDEYSEADEEEEEEEGKPSR_ 0 0 0 1 Q96T23 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 816.0004 3 815.661375 2443.9623 NaN NaN NaN 0.5372 0.00043817 NaN NaN NaN NaN 59.673 0.27701 59.673 59.484 59.761 3.8147E-06 0 0 0 8.0748E-17 1 26797 95.195 83.002 1 NaN NaN 0 7227800 7227800 0 5826 1188 3015 3350 9495 9495 STDFVFIPPEGK 12 1 0 Phospho (STY) _S(ph)TDFVFIPPEGK_ S(0.5)T(0.5)DFVFIPPEGK S(0)T(0)DFVFIPPEGK 0 0 1 0 Q5UIP0 Q5UIP0 Q5UIP0 RIF1 Telomere-associated protein RIF1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 708.8276 2 708.825976 1415.6374 NaN NaN NaN 0.05701 4.0411E-05 NaN NaN NaN NaN 118.84 0.61418 118.84 118.54 119.15 0 0 0 0 0.0015502 1 71405 74.537 52.306 2 NaN NaN 0 8347300 8347300 0 5827 1110 3016 3351 9496 9496 2101;2948 STELLIR 7 0 1 Unmodified _STELLIR_ 0 0 0 0 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 831.4943 1 831.493444 830.486168 67326.52 0.68843 0.00057242 0.059407 4.9396E-05 0.74783 0.00062182 831.49337604696 841.501575959129 85.182 1.4833 85.182 84.497 85.98 0 395 140 4 0 0 0 0.0082766 1 45801 56.51 1.985 1 0.76634 0.967 0 70976000 37636000 33340000 5828 527;1108 3017 3352 9497 9497 STELLIR 7 0 1 Unmodified _STELLIR_ 0 0 0 0 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 416.2504 2 416.25036 830.486168 93105.16 0.12596 5.2431E-05 -0.097698 -4.0667E-05 0.028263 1.1764E-05 416.250187486971 421.254388793849 85.213 2.3315 85.213 85.114 87.445 0 809 222 5 0 0 0 0.0055001 3 46463 126.24 37.509 1 0.76457 0.96845 0 602320000 343430000 258890000 5829 527;1108 3017 3352 9498;9499;9500 9499 STELLIR 7 0 1 Unmodified _STELLIR_ 0 0 0 0 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 416.2506 2 416.25036 830.486168 92220.2 0.32073 0.00013351 0.039019 1.6242E-05 0.35975 0.00014975 416.250268720626 421.254378527987 66.903 3.1865 66.903 65.795 68.981 0 1176 289 7 0 0 0 0.031142 1 42218 95.793 18.419 1 0.88927 0.5982 0 96230000 51609000 44622000 5830 527;1108 3017 3352 9501 9501 STELLIR 7 0 1 Unmodified _STELLIR_ 0 0 0 0 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 416.2503 2 416.25036 830.486168 NaN NaN NaN -0.071127 -2.9607E-05 NaN NaN NaN NaN 69.015 0.39761 69.015 68.684 69.081 0 0 0 0 0.0050593 1 43328 71.852 11.494 1 NaN NaN 0 4366300 4366300 0 5831 527;1108 3017 3352 9502 9502 STELLIR 7 0 1 Unmodified _STELLIR_ 0 0 0 0 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 416.2507 2 416.25036 830.486168 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.152 1 65.152 64.652 65.652 0 0 0 0 3.2303E-05 1 40661 95.793 23.844 1 5832 527;1108 3017 3352 9503 9503 STESLQANVQR 11 0 1 Unmodified _STESLQANVQR_ 0 0 0 0 J3QSB4;Q6NZ55;A8K4C8;P26373 J3QSB4 J3QSB4 RPL13 60S ribosomal protein L13 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 621.8207 2 616.815116 1231.61568 80812.35 0.427 0.00026338 0.037416 2.3079E-05 0.46442 0.00028646 617.315885260593 621.819578976939 54.373 1.1217 54.373 53.709 54.831 0 199 85 4 0 0 0 0.005286 2 22727 76.679 76.679 1 0.75702 0.85667 0 10816000 4973900 5842200 5833 459 3018 3353 9504;9505 9504 STESLQANVQR 11 0 1 Unmodified _STESLQANVQR_ 0 0 0 0 J3QSB4;Q6NZ55;A8K4C8;P26373 J3QSB4 J3QSB4 RPL13 60S ribosomal protein L13 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 616.8158 2 616.815116 1231.61568 NaN NaN NaN NaN NaN NaN NaN NaN NaN 53.961 1 53.961 53.461 54.461 0 0 0 0 0.0061748 1 22726 96.948 74.8 1 5834 459 3018 3353 9506 9506 STFREESPLR 10 0 2 Phospho (STY) _STFREES(ph)PLR_ S(0.017)T(0.017)FREES(0.965)PLR S(-17.43)T(-17.43)FREES(17.43)PLR 0 0 1 1 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09;E9PJA7 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 661.3058 2 651.297917 1300.58128 74067.95 0.84911 0.00055303 -0.076066 -4.9541E-05 0.77305 0.00050349 651.297810684924 661.306149029728 67.461 1.3127 67.461 67.075 68.388 0 563 112 9 0 0 0 0.017625 1 32980 41.283 24.651 3 1.1179 1.4 0 426480000 200020000 226460000 5835 809 3019 3354 9507 9507 1400 STFREESPLR 10 0 2 Phospho (STY) _STFREES(ph)PLR_ STFREES(1)PLR S(-41.9)T(-54.62)FREES(41.9)PLR 0 0 1 1 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09;E9PJA7 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 441.2061 3 434.53437 1300.58128 90715.85 0.027884 1.2117E-05 -0.030391 -1.3206E-05 -0.0025072 -1.0894E-06 434.534336637653 441.206487778869 67.43 1.1616 67.43 67.075 68.237 0 510 99 8 0 0 0 9.7854E-06 1 33064 94.688 67.358 3 1.1528 1.442 0 321730000 161630000 160100000 5836 809 3019 3354 9508 9508 1400 STFREESPLR 10 0 2 Phospho (STY) _STFREES(ph)PLR_ ST(0.001)FREES(0.999)PLR S(-40.59)T(-29.43)FREES(29.43)PLR 0 0 1 1 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09;E9PJA7 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 434.5342 3 434.53437 1300.58128 90042.26 0.17789 7.7297E-05 0.037417 1.6259E-05 0.2153 9.3556E-05 434.534382193193 441.206547538902 38.802 2.2042 38.802 38.394 40.599 0 926 198 10 0 0 0 0.0033612 1 22715 56.139 38.553 3 1.5591 1.3566 0 100460000 40267000 60189000 5837 809 3019 3354 9509 9509 1400 STFREESPLR 10 0 2 Phospho (STY) _STFREES(ph)PLR_ STFREES(1)PLR S(-85.08)T(-85.08)FREES(85.08)PLR 0 0 1 1 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09;E9PJA7 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 661.8084 2 651.297917 1300.58128 NaN NaN NaN -0.013582 -8.8459E-06 NaN NaN NaN NaN 38.76 2.583 38.76 38.078 40.661 0 0 0 0 1.1206E-15 1 22192 113.99 68.072 3 NaN NaN 0 150490000 0 150490000 5838 809 3019 3354 9510 9510 1400 STFSTNYR 8 0 1 Unmodified _STFSTNYR_ 0 0 0 0 F8VZY9;B2RA03;A0A024RAY2;P05783 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 493.235 2 488.230156 974.445759 86135.09 0.42839 0.00020915 0.28614 0.0001397 0.71453 0.00034886 488.23025240669 493.234338544758 60.46 0.80085 60.46 60.181 60.982 0 211 55 5 0 0 0 0.028371 1 27355 67.032 58.259 1 1.1852 1.4489 0 21837000 10678000 11158000 5839 186 3020 3355 9511 9511 STGEAFVQFASQEIAEK 17 1 0 Phospho (STY) _STGEAFVQFAS(ph)QEIAEK_ STGEAFVQFAS(1)QEIAEK S(-42.86)T(-42.86)GEAFVQFAS(42.86)QEIAEK 0 0 1 0 G8JLB6;P31943;E9PCY7;D6RIU0;D6RBM0;H0YB39;P55795;E5RGH4;E5RGV0;E7EN40;B4DFK9 G8JLB6 G8JLB6 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 961.9366 2 961.432596 1920.85064 64991.37 0.4993 0.00048005 0.45182 0.00043439 0.95112 0.00091444 961.43342878254 965.439425806231 110.99 0.33039 110.99 110.76 111.09 0 94 28 5 0 0 0 6.8721E-05 1 65542 54.501 46.635 3 0.58395 0.69547 0 12197000 7617100 4580000 5840 844 3021 3356 9512 9512 1450 STHEFKPQSGAEIK 14 2 0 Unmodified _STHEFKPQSGAEIK_ 0 0 0 1 O43683;A0JLU2;A8K5A6 O43683 O43683 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 525.6097 3 520.26685 1557.77872 85195.91 0.56877 0.00029591 -0.36869 -0.00019182 0.20008 0.0001041 520.266711028275 525.609380740511 95.156 0.85519 95.156 94.588 95.444 0 168 67 5 0 0 0 0.015052 1 53399 38.799 28.154 1 0.85139 1.0397 0 32220000 15645000 16575000 5841 926 3022 3357 9513 9513 STHSELLEDYYQSGR 15 0 1 Unmodified _STHSELLEDYYQSGR_ 0 0 0 0 B4DZ22;B4DL07;P28288 B4DZ22 B4DZ22 ABCD3 ATP-binding cassette sub-family D member 3 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 598.9445 3 595.607712 1783.80131 NaN NaN NaN -0.2626 -0.00015641 NaN NaN NaN NaN 105.74 0.43048 105.74 105.59 106.02 7.6294E-06 0 0 0 0.0027739 1 61444 52.599 39.499 1 NaN NaN 0 4468600 0 4468600 5842 635 3023 3358 9514 9514 STLENQNWR 9 0 1 Phospho (STY) _S(ph)TLENQNWR_ S(0.5)T(0.5)LENQNWR S(0)T(0)LENQNWR 0 0 1 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 614.262 2 614.261334 1226.50812 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.662 1 58.662 58.162 59.162 0 0 0 0 0.0051523 1 26088 54.066 33.232 2 5843 464 3024 3359 9515 9515 811;2740 STLESEKPGSPEAAETSPPSNIIDHCEK 28 2 0 2 Phospho (STY) _STLESEKPGS(ph)PEAAETS(ph)PPSNIIDHCEK_ S(0.034)T(0.036)LES(0.163)EKPGS(0.727)PEAAET(0.294)S(0.688)PPS(0.058)NIIDHCEK S(-13.5)T(-13.22)LES(-6.71)EKPGS(6.71)PEAAET(-4.19)S(4.19)PPS(-10.65)NIIDHCEK 0 0 2 1 Q96T23;H0YER1;H0YCN2 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1058.1168 3 1057.44727 3169.31999 58641.96 0.30466 0.00032216 -0.00034115 -3.6075E-07 0.30432 0.0003218 1057.78146255491 1063.12471882741 85.178 1.1754 85.178 84.675 85.851 0 625 111 7 0 0 0 2.0445E-10 1 46211 49.464 49.464 21 0.48226 0.61994 0 114360000 63894000 50467000 5844 1188 3025 3360 9516 9516 2348;2349 STLESEKPGSPEAAETSPPSNIIDHCEK 28 2 0 2 Phospho (STY) _STLESEKPGS(ph)PEAAETS(ph)PPSNIIDHCEK_ S(0.008)T(0.009)LES(0.028)EKPGS(0.951)PEAAET(0.267)S(0.673)PPS(0.064)NIIDHCEK S(-21.19)T(-20.94)LES(-15.59)EKPGS(15.59)PEAAET(-4.08)S(4.08)PPS(-10.38)NIIDHCEK 0 0 2 1 Q96T23;H0YER1;H0YCN2 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1057.7842 3 1057.44727 3169.31999 58303.58 0.59915 0.00063357 0.10875 0.00011499 0.7079 0.00074856 1057.78187624962 1063.12469391491 84.339 1.565 84.339 83.53 85.095 0 1590 141 16 0 0 0 2.7797E-10 1 54279 47.884 42.725 21 1.309 0.96367 0 330470000 140580000 189890000 5845 1188 3025 3360 9517 9517 2348;2349 STPFIVPSSPTEQEGR 16 0 1 Phospho (STY) _STPFIVPSS(ph)PTEQEGR_ STPFIVPS(0.262)S(0.571)PT(0.166)EQEGR S(-35.4)T(-35.4)PFIVPS(-3.37)S(3.37)PT(-5.35)EQEGR 0 0 1 0 B7Z3E7;A6NNK5;Q12888;C9JXV0;A8KA50 B7Z3E7 B7Z3E7 TP53BP1 Tumor suppressor p53-binding protein 1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 911.918 2 906.414206 1810.81386 NaN NaN NaN -0.31597 -0.0002864 NaN NaN NaN NaN 99.268 1.1782 99.268 98.778 99.956 0 0 0 0 2.7402E-06 1 56441 68.413 37.8 5 NaN NaN 0 28477000 0 28477000 5846 430 3026 3361 9518 9518 748 STPKEETVNDPEEAGHR 17 1 1 Phospho (STY) _S(ph)TPKEETVNDPEEAGHR_ S(0.458)T(0.458)PKEET(0.084)VNDPEEAGHR S(0)T(0)PKEET(-7.34)VNDPEEAGHR 0 0 1 1 A8K9K6;O00567;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 665.2934 3 659.284619 1974.83203 73809.04 0.75235 0.00049601 -0.83427 -0.00055002 -0.081923 -5.4011E-05 659.284506280307 665.291309330869 57.833 0.89037 57.833 57.349 58.239 0 375 72 8 0 0 0 0.00017778 1 25281 43.454 36.563 3 0.4928 0.58232 0 46966000 32049000 14917000 5847 504 3027 3362 9519 9519 865;2753 STPKEETVNDPEEAGHR 17 1 1 Phospho (STY) _S(ph)TPKEETVNDPEEAGHR_ S(0.49)T(0.49)PKEET(0.02)VNDPEEAGHR S(0)T(0)PKEET(-14)VNDPEEAGHR 0 0 1 1 A8K9K6;O00567;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 659.2853 3 659.284619 1974.83203 73622.26 0.84081 0.00055434 0.076609 5.0507E-05 0.91742 0.00060484 659.619083653568 665.292187661635 20.199 1.1105 20.199 19.821 20.932 0 378 54 12 0 0 0 4.1822E-24 2 7001 119.38 94.486 3 0.77352 0.59898 0 615520000 352280000 263250000 5848 504 3027 3362 9520;9521 9521 865;2753 STPKEETVNDPEEAGHR 17 1 1 Phospho (STY) _S(ph)TPKEETVNDPEEAGHR_ S(0.5)T(0.5)PKEET(0.001)VNDPEEAGHR S(0)T(0)PKEET(-29.76)VNDPEEAGHR 0 0 1 1 A8K9K6;O00567;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 988.4241 2 988.423291 1974.83203 61406.24 0.1676 0.00016566 0.61805 0.00061089 0.78565 0.00077656 988.423966268689 997.434911169541 20.192 0.50785 20.192 19.919 20.426 0 167 25 10 0 0 0 3.1169E-05 1 7065 65.231 42.511 3 0.68582 0.52906 0 67072000 35495000 31577000 5849 504 3027 3362 9522 9522 865;2753 STPKEETVNDPEEAGHR 17 1 1 Phospho (STY) _S(ph)TPKEETVNDPEEAGHR_ S(0.476)T(0.476)PKEET(0.049)VNDPEEAGHR S(0)T(0)PKEET(-9.91)VNDPEEAGHR 0 0 1 1 A8K9K6;O00567;Q9BSN3 A8K9K6 A8K9K6 NOP56 Nucleolar protein 56 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 665.2928 3 659.284619 1974.83203 71691.03 0.77426 0.00051046 0.60402 0.00039822 1.3783 0.00090867 659.618476264013 665.292772046847 21.335 0.53044 21.335 21.152 21.683 0 73 22 6 0 0 0 0.00040146 1 8085 40.158 31.664 3 1.4121 1.0811 0 15652000 5745700 9906600 5850 504 3027 3362 9523 9523 865;2753 STPLASPSPSPGR 13 0 1 Phospho (STY) _STPLAS(ph)PSPSPGR_ S(0.001)T(0.001)PLAS(0.796)PS(0.166)PS(0.037)PGR S(-31.24)T(-31.24)PLAS(6.8)PS(-6.8)PS(-13.33)PGR 0 0 1 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 667.312 2 667.311024 1332.6075 75441.96 0.79107 0.00052789 -0.042912 -2.8636E-05 0.74815 0.00049925 667.31088720126 672.315172582258 55.914 1.1809 55.914 55.357 56.537 0 436 95 8 0 0 0 0.0070243 2 23816 43.813 33.624 5 1.8378 2.2588 0 29996000 9536900 20460000 5851 1170 3028 3363 9524;9525 9524 2297;2298;2299 STPLASPSPSPGR 13 0 1 Phospho (STY) _STPLAS(ph)PSPSPGR_ STPLAS(0.991)PS(0.008)PSPGR S(-79.89)T(-73.56)PLAS(20.72)PS(-20.72)PS(-33.05)PGR 0 0 1 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 672.8181 2 667.311024 1332.6075 73696.1 0.84225 0.00056204 0.55227 0.00036854 1.3945 0.00093058 667.311010513236 672.315689419846 48.792 1.5571 48.792 48.15 49.707 0 627 147 7 0 0 0 2.9321E-14 1 29280 113.56 85.507 5 3.5362 2.3876 0 79949000 18478000 61471000 5852 1170 3028 3363 9526 9526 2297;2298;2299 STPLASPSPSPGR 13 0 1 2 Phospho (STY) _STPLAS(ph)PS(ph)PSPGR_ STPLAS(0.996)PS(0.86)PS(0.144)PGR S(-42)T(-41.63)PLAS(22.99)PS(7.86)PS(-7.86)PGR 0 0 2 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 712.2982 2 707.294189 1412.57383 NaN NaN NaN -0.29724 -0.00021024 NaN NaN NaN NaN 56.107 1.0669 56.107 55.481 56.548 3.8147E-06 0 0 0 0.0004775 1 24390 58.885 38.458 10 NaN NaN 0 7840000 0 7840000 5853 1170 3028 3364 9527 9527 2297;2298;2299 STPLASPSPSPGR 13 0 1 2 Phospho (STY) _STPLAS(ph)PS(ph)PSPGR_ S(0.001)T(0.001)PLAS(0.976)PS(0.885)PS(0.137)PGR S(-31.24)T(-30.96)PLAS(15.89)PS(8.75)PS(-8.75)PGR 0 0 2 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 712.2973 2 707.294189 1412.57383 68254.85 1.2079 0.00085437 -1.1106 -0.00078555 0.097289 6.8812E-05 707.294021064413 712.297268967693 59.023 0.94362 59.023 58.596 59.54 0 364 88 5 0 0 0 0.0044085 1 36308 48.177 39.045 10 3.1035 2.2936 0 23267000 6324700 16942000 5854 1170 3028 3364 9528 9528 2297;2298;2299 STPLASPSPSPGRSPQR 17 0 2 4 Phospho (STY) _STPLAS(ph)PS(ph)PS(ph)PGRS(ph)PQR_ S(0.064)T(0.066)PLAS(0.935)PS(0.97)PS(0.965)PGRS(0.999)PQR S(-15.81)T(-15.5)PLAS(15.5)PS(20.11)PS(20.11)PGRS(39.18)PQR 0 0 4 1 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1021.3835 2 1021.38276 2040.75097 60222.27 0.10405 0.00010627 0.45868 0.00046849 0.56273 0.00057476 1021.38343106047 1031.39151424559 53.027 1.8309 53.027 52.25 54.081 0 1157 149 11 0 0 0 1.8014E-05 1 22133 52.612 38.949 15 1.2074 1.5097 0 296790000 139800000 156990000 5855 1170 3029 3365 9529 9529 2297;2298;2299;2300 STPLASPSPSPGRSPQR 17 0 2 3 Phospho (STY) _STPLAS(ph)PS(ph)PS(ph)PGRSPQR_ S(0.212)T(0.233)PLAS(0.555)PS(0.958)PS(0.863)PGRS(0.179)PQR S(-3.65)T(-3.24)PLAS(3.24)PS(11.76)PS(6.62)PGRS(-6.62)PQR 0 0 3 1 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 981.4 2 981.399595 1960.78464 61864.63 0.22677 0.00022255 0.52751 0.0005177 0.75427 0.00074024 981.399979229129 991.408550734582 53.54 1.2531 53.54 52.933 54.186 0 642 104 8 0 0 0 0.00016211 1 22256 42.475 34.751 20 1.5363 1.9104 0 77747000 31321000 46426000 5856 1170 3029 3366 9530 9530 2297;2298;2299;2300 STPLASPSPSPGRSPQR 17 0 2 3 Phospho (STY) _STPLAS(ph)PS(ph)PSPGRS(ph)PQR_ S(0.117)T(0.127)PLAS(0.687)PS(0.611)PS(0.474)PGRS(0.983)PQR S(-8.19)T(-7.78)PLAS(6.51)PS(1.43)PS(-1.43)PGRS(15.57)PQR 0 0 3 1 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 991.4092 2 981.399595 1960.78464 NaN NaN NaN 0.76535 0.00075111 NaN NaN NaN NaN 55.866 1.7713 55.866 55.292 57.063 0 0 0 0 0.0021335 1 34625 40.349 23.209 20 NaN NaN 0 53426000 0 53426000 5857 1170 3029 3366 9531 9531 2297;2298;2299;2300 STPLASPSPSPGRSPQR 17 0 2 Phospho (STY) _STPLASPSPS(ph)PGRSPQR_ STPLAS(0.006)PS(0.145)PS(0.424)PGRS(0.424)PQR S(-49.85)T(-49.85)PLAS(-18.65)PS(-4.66)PS(0)PGRS(0)PQR 0 0 1 1 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 601.626 3 601.291268 1800.85198 77066.38 0.67192 0.00040402 0.029456 1.7711E-05 0.70138 0.00042173 601.290858081007 607.963476504764 59.029 1.0386 59.029 58.661 59.7 -3.8147E-06 423 83 6 0 0 0 2.5288E-05 1 26323 55.575 23.875 6 1.4088 1.7489 0 51800000 18921000 32880000 5858 1170 3029 3367 9532 9532 2297;2298;2299;2300 STSPAGQHHSPISSR 15 0 1 Phospho (STY) _STS(ph)PAGQHHSPISSR_ S(0.002)T(0.002)S(0.995)PAGQHHSPISSR S(-27.02)T(-27.02)S(27.02)PAGQHHS(-34.18)PIS(-39.74)S(-39.74)R 0 0 1 0 Q5T200;A0PJJ2;Q32Q34 Q5T200 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 543.5773 3 543.577409 1627.7104 81051.68 0.83572 0.00045428 -0.51185 -0.00027823 0.32387 0.00017605 543.57723146231 546.913158546893 16.736 0.45469 16.736 16.422 16.877 0 49 11 6 0 0 0 0.00052319 1 4032 52.966 40.088 6 0.19565 0.14206 0 26187000 22083000 4103900 5859 1102 3030 3368 9533 9533 2087 STTPPPAEPVSLPQEPPK 18 1 0 Phospho (STY) _S(ph)TTPPPAEPVSLPQEPPK_ S(0.333)T(0.333)T(0.333)PPPAEPVS(0.001)LPQEPPK S(0)T(0)T(0)PPPAEPVS(-27.11)LPQEPPK 0 0 1 0 A8K6V7;A0A024RDB2;A0A024RDE5;Q9UN86 A8K6V7 A8K6V7 G3BP2 Ras GTPase-activating protein-binding protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 980.985 2 976.474264 1950.93397 63762.01 1.0479 0.0010233 -0.11561 -0.00011289 0.93231 0.00091038 976.975701205957 980.481325266625 93.172 0.35944 93.172 92.907 93.266 0 79 29 5 0 0 0 0.00024035 1 51719 43.991 43.991 4 2.2799 2.7959 0 20998000 5825200 15173000 5860 225 3031 3369 9534 9534 353;2661;2662 STTPPPAEPVSLPQEPPKPR 20 1 1 Phospho (STY) _STT(ph)PPPAEPVSLPQEPPKPR_ S(0.039)T(0.039)T(0.922)PPPAEPVSLPQEPPKPR S(-13.73)T(-13.73)T(13.73)PPPAEPVS(-36.27)LPQEPPKPR 0 0 1 1 A8K6V7;A0A024RDB2 A8K6V7 A8K6V7 G3BP2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 735.7043 3 735.703226 2204.08785 71131.28 1.4617 0.0010753 0.070161 5.1617E-05 1.5318 0.001127 736.03742293719 742.045090728394 90.727 1.0568 90.727 90.255 91.312 0 539 94 8 0 0 0 1.0064E-05 3 50292 50.158 45.72 4 1.6119 1.9252 0 101480000 35946000 65531000 5861 225 3032 3370 9535;9536;9537 9537 353;2661;2662 STTTGHLIYK 10 1 0 Unmodified _STTTGHLIYK_ 0 0 0 0 A0A087WV01;Q9H2I7;Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q53GE9;Q53GA1;Q5VTE0;P68104;A0A087WVQ9;Q53G85;B4DNE0;Q05639;A6PW80;Q5JR01;Q6NS35;Q6NSH7 A0A087WV01 A0A087WV01 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 560.8035 2 560.803488 1119.59242 80911.21 0.81508 0.0004571 -0.16758 -9.398E-05 0.6475 0.00036312 560.803371478263 564.810419531902 80.159 1.762 80.159 79.563 81.325 0 891 161 8 0 0 0 1.6864E-14 3 42091 140.14 101.12 1 2.3307 2.8782 0 612560000 186540000 426020000 5862 252 3033 3371 9538;9539;9540 9538 STTTGHLIYK 10 1 0 Unmodified _STTTGHLIYK_ 0 0 0 0 A0A087WV01;Q9H2I7;Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q53GE9;Q53GA1;Q5VTE0;P68104;A0A087WVQ9;Q53G85;B4DNE0;Q05639;A6PW80;Q5JR01;Q6NS35;Q6NSH7 A0A087WV01 A0A087WV01 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 374.205 3 374.204751 1119.59242 98239.43 0.16005 5.9892E-05 -0.2727 -0.00010205 -0.11265 -4.2156E-05 374.538943525228 376.876015413359 80.42 0.46446 80.42 80.34 80.805 0 124 43 5 0 0 0 0.018915 1 42631 32.731 23.792 1 1.8091 2.2939 0 35331000 7295000 28036000 5863 252 3033 3371 9541 9541 STTTGHLIYK 10 1 0 Unmodified _STTTGHLIYK_ 0 0 0 0 A0A087WV01;Q9H2I7;Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q53GE9;Q53GA1;Q5VTE0;P68104;A0A087WVQ9;Q53G85;B4DNE0;Q05639;A6PW80;Q5JR01;Q6NS35;Q6NSH7 A0A087WV01 A0A087WV01 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 564.8113 2 560.803488 1119.59242 82322.41 0.60122 0.00033717 0.45301 0.00025405 1.0542 0.00059122 560.803666763605 564.810896618773 27.053 0.50917 27.053 26.811 27.32 0 105 33 4 0 0 0 0.027333 1 13018 58.433 35.362 1 1.5896 1.2275 0 7419900 3166400 4253600 5864 252 3033 3371 9542 9542 SVAVSDEEEVEEEAER 16 0 1 Phospho (STY) _SVAVS(ph)DEEEVEEEAER_ SVAVS(1)DEEEVEEEAER S(-49.33)VAVS(49.33)DEEEVEEEAER 0 0 1 0 Q9Y6X9 Q9Y6X9 Q9Y6X9 MORC2 MORC family CW-type zinc finger protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 943.881 2 943.88059 1885.74663 62992.3 0.78326 0.00073931 0.017509 1.6526E-05 0.80077 0.00075583 943.880539415277 948.88452612246 79.737 0.98953 79.737 79.231 80.22 0 333 90 5 0 0 0 7.5959E-30 1 41821 122.96 104.59 2 0.51777 0.65174 0 49986000 33998000 15988000 5865 1257 3034 3372 9543 9543 2594 SVAVSDEEEVEEEAER 16 0 1 Phospho (STY) _SVAVS(ph)DEEEVEEEAER_ SVAVS(1)DEEEVEEEAER S(-52.31)VAVS(52.31)DEEEVEEEAER 0 0 1 0 Q9Y6X9 Q9Y6X9 Q9Y6X9 MORC2 MORC family CW-type zinc finger protein 2 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 944.3837 2 943.88059 1885.74663 NaN NaN NaN 0.035193 3.3218E-05 NaN NaN NaN NaN 84.348 0.60502 84.348 84.026 84.631 0 0 0 0 1.4309E-22 1 54053 113.69 99.656 2 NaN NaN 0 13553000 13553000 0 5866 1257 3034 3372 9544 9544 2594 SVAVSDEEEVEEEAER 16 0 1 Phospho (STY) _SVAVS(ph)DEEEVEEEAER_ S(0.011)VAVS(0.989)DEEEVEEEAER S(-19.63)VAVS(19.63)DEEEVEEEAER 0 0 1 0 Q9Y6X9 Q9Y6X9 Q9Y6X9 MORC2 MORC family CW-type zinc finger protein 2 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 948.8857 2 943.88059 1885.74663 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.358 1 84.358 83.858 84.858 0 0 0 0 0.00049442 1 54124 52.071 38.409 2 5867 1257 3034 3372 9545 9545 2594 SVCINPLMSPK 11 1 0 Oxidation (M),Phospho (STY) _SVCINPLM(ox)S(ph)PK_ SVCINPLM(1)SPK SVCINPLMS(1)PK SVCINPLM(76.07)SPK S(-76.07)VCINPLMS(76.07)PK 0 1 1 0 A0A1B0GUH9;A0PJI9;A0A1P0AZG4 A0A1B0GUH9 A0A1B0GUH9 C10orf12 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 675.3083 2 671.300756 1340.58696 76457.57 0.78323 0.00052578 0.18318 0.00012297 0.9664 0.00064875 671.300688739981 675.30791176117 93.491 0.59595 93.491 93.109 93.705 0 183 60 4 0 0 0 0.0014829 1 60203 76.073 65.321 2 2.8638 2.1242 0 9126600 2475800 6650700 5868 385 3035 3373 9546 9546 98 657 SVEDEMDSPGEEPFYTGQGR 20 0 1 Oxidation (M),Phospho (STY) _SVEDEM(ox)DS(ph)PGEEPFYTGQGR_ SVEDEM(1)DSPGEEPFYTGQGR S(0.453)VEDEMDS(0.546)PGEEPFY(0.001)TGQGR SVEDEM(49.93)DSPGEEPFYTGQGR S(-0.81)VEDEMDS(0.81)PGEEPFY(-30.35)T(-35.89)GQGR 0 1 1 0 S4R3W2;B1AKN7;B1AKN5;B4DRN9;B1AKN8;Q12857 S4R3W2 S4R3W2 NFIA Nuclear factor 1;Nuclear factor 1 A-type MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1168.9503 2 1163.4463 2324.87805 57080.02 0.3642 0.00042373 0.21439 0.00024943 0.57859 0.00067316 1163.94777492962 1168.95237730186 80.743 0.95497 80.743 80.34 81.295 -7.6294E-06 253 86 5 0 0 0 2.2328E-05 2 42660 49.929 44.65 4 1.0555 1.3274 0 43909000 23286000 20623000 5869 518 3036 3374 9547;9548 9548 136 883;884 SVEDEMDSPGEEPFYTGQGR 20 0 1 Oxidation (M),Phospho (STY) _S(ph)VEDEM(ox)DSPGEEPFYTGQGR_ SVEDEM(1)DSPGEEPFYTGQGR S(0.561)VEDEMDS(0.439)PGEEPFYTGQGR SVEDEM(58.75)DSPGEEPFYTGQGR S(1.07)VEDEMDS(-1.07)PGEEPFY(-47.65)T(-54.2)GQGR 0 1 1 0 S4R3W2;B1AKN7;B1AKN5;B4DRN9;B1AKN8;Q12857 S4R3W2 S4R3W2 NFIA Nuclear factor 1;Nuclear factor 1 A-type MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1163.9484 2 1163.4463 2324.87805 55356.91 0.41486 0.00048266 0.22253 0.0002589 0.63738 0.00074156 1163.94808208219 1168.95212897359 84.049 0.78864 84.049 83.66 84.449 0 332 70 8 0 0 0 2.9264E-07 1 53928 58.752 53.769 4 2.0306 1.4144 0 38120000 12692000 25429000 5870 518 3036 3374 9549 9549 136 883;884 SVEDRFDQQK 10 1 1 Phospho (STY) _S(ph)VEDRFDQQK_ S(1)VEDRFDQQK S(61.44)VEDRFDQQK 0 0 1 1 P15924;B4DKX6;B4E2A0;Q4LE79 P15924 P15924 DSP;DSP variant protein Desmoplakin ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 666.2858 2 666.285006 1330.55546 NaN NaN NaN 0.12862 8.5695E-05 NaN NaN NaN NaN 51.946 1.4109 51.946 51.3 52.711 0 0 0 0 0.021773 1 21586 61.435 30.362 1 NaN NaN 0 31315000 31315000 0 5871 965 3037 3375 9550 9550 1710 SVEDRFDQQK 10 1 1 Phospho (STY) _S(ph)VEDRFDQQK_ S(1)VEDRFDQQK S(72.29)VEDRFDQQK 0 0 1 1 P15924;B4DKX6;B4E2A0;Q4LE79 P15924 P15924 DSP;DSP variant protein Desmoplakin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 666.285 2 666.285006 1330.55546 73318.85 1.0806 0.00071996 0.14941 9.9553E-05 1.23 0.00081951 666.284932251629 675.297051748804 26.031 0.41249 26.031 25.832 26.245 0 130 22 8 0 0 0 0.0017759 1 12103 72.29 55.621 1 0.94565 0.7293 0 57152000 28706000 28446000 5872 965 3037 3375 9551 9551 1710 SVELEEALPVTTAEGMAK 18 1 0 Acetyl (Protein N-term),Oxidation (M),Phospho (STY) _(ac)S(ph)VELEEALPVTTAEGM(ox)AK_ SVELEEALPVTTAEGM(1)AK S(1)VELEEALPVTTAEGMAK SVELEEALPVTTAEGM(107.34)AK S(104.36)VELEEALPVT(-104.52)T(-104.36)AEGMAK 1 1 1 0 Q92522 Q92522 Q92522 H1FX Histone H1x MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1007.4612 2 1006.96033 2011.9061 60592.99 0.49408 0.00049752 0.50283 0.00050633 0.99692 0.0010039 1007.46207768251 1010.96780105039 127.18 0.92735 127.18 126.71 127.64 -7.6294E-06 721 87 12 0 0 0 2.754E-18 2 76981 107.34 96.433 3 0.73447 0.90986 0 146840000 83499000 63343000 5873 1171 3038 3376 9552;9553 9552 327 2303 SVELEEALPVTTAEGMAK 18 1 0 Oxidation (M),Phospho (STY) _S(ph)VELEEALPVTTAEGM(ox)AK_ SVELEEALPVTTAEGM(1)AK S(1)VELEEALPVTTAEGMAK SVELEEALPVTTAEGM(89.36)AK S(78.41)VELEEALPVT(-78.41)T(-82.45)AEGMAK 0 1 1 0 Q92522 Q92522 Q92522 H1FX Histone H1x ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 990.4642 2 985.955046 1969.89554 NaN NaN NaN 0.19334 0.00019062 NaN NaN NaN NaN 111.84 0.41511 111.84 111.68 112.1 0 0 0 0 2.0105E-11 2 66340 89.358 72.472 3 NaN NaN 0 7479400 0 7479400 5874 1171 3038 3377 9554;9555 9555 327 2303 SVELEEALPVTTAEGMAK 18 1 0 Oxidation (M),Phospho (STY) _S(ph)VELEEALPVTTAEGM(ox)AK_ SVELEEALPVTTAEGM(1)AK S(1)VELEEALPVTTAEGMAK SVELEEALPVTTAEGM(54)AK S(52.2)VELEEALPVT(-52.2)T(-52.2)AEGMAK 0 1 1 0 Q92522 Q92522 Q92522 H1FX Histone H1x MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 986.458 2 985.955046 1969.89554 60197.41 0.68205 0.00067247 0.30673 0.00030243 0.98878 0.00097489 986.457081097177 989.963532082234 119.38 0.79035 119.38 119.02 119.81 -7.6294E-06 318 69 7 0 0 0 6.8852E-06 1 76924 54.004 37.32 3 0.11742 0.07622 0 35973000 31575000 4397400 5875 1171 3038 3377 9556 9556 327 2303 SVENQESVEIINDLK 15 1 0 Phospho (STY) _S(ph)VENQESVEIINDLK_ S(1)VENQESVEIINDLK S(133.77)VENQES(-133.77)VEIINDLK 0 0 1 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 898.9199 2 898.919321 1795.82409 64086.9 0.84004 0.00075513 0.056668 5.094E-05 0.89671 0.00080607 898.919347093309 902.926353611705 113.82 0.99649 113.82 113.38 114.37 7.6294E-06 603 87 10 0 0 0 5.847E-122 2 67581 212.7 171.76 2 0.74469 0.92212 0 179500000 104220000 75274000 5876 1170 3039 3378 9557;9558 9558 2301;2302 SVENQESVEIINDLK 15 1 0 Phospho (STY) _S(ph)VENQESVEIINDLK_ S(1)VENQESVEIINDLK S(61.94)VENQES(-61.94)VEIINDLK 0 0 1 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 898.9201 2 898.919321 1795.82409 64012.7 1.2269 0.0011029 -0.0011101 -9.9788E-07 1.2258 0.0011019 898.919447104659 902.926437906084 121.45 1.3231 121.45 121 122.32 7.6294E-06 843 125 12 0 0 0 2.5556E-08 2 78343 92.773 78.515 2 1.3879 0.9269 0 263490000 113290000 150200000 5877 1170 3039 3378 9559;9560 9560 2301;2302 SVENQESVEIINDLK 15 1 0 2 Phospho (STY) _S(ph)VENQES(ph)VEIINDLK_ S(1)VENQES(1)VEIINDLK S(60.31)VENQES(60.31)VEIINDLK 0 0 2 0 Q8WYP5;B3KVE5;B3KTD2;B3KRD0 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 939.4048 2 938.902486 1875.79042 63822.36 0.87925 0.00082553 0.21422 0.00020113 1.0935 0.0010267 938.902735703296 943.411012001257 117.05 0.63148 117.05 116.8 117.43 0 246 57 7 0 0 0 0.0007921 1 69949 60.307 45.835 1 0.56407 0.69 0 19702000 11651000 8051000 5878 1170 3039 3379 9561 9561 2301;2302 SVGDGETVEFDVVEGEK 17 1 0 Phospho (STY) _S(ph)VGDGETVEFDVVEGEK_ S(1)VGDGETVEFDVVEGEK S(42.45)VGDGET(-42.45)VEFDVVEGEK 0 0 1 0 Q7KZ24;H0Y449;P67809;A0A0D9SEI8;Q59EB5;Q6PKI6;Q59HE1;A0A024RAV4;B2RCC2;A0A024RAQ1;Q9Y2T7;P16989 Q7KZ24 Q7KZ24 YBX1;YBX3;CSDA;YBX2 Nuclease-sensitive element-binding protein 1;Y-box-binding protein 2;Y-box-binding protein 3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 942.4073 2 938.398419 1874.78228 NaN NaN NaN NaN NaN NaN NaN NaN NaN 106.13 1 106.13 105.63 106.63 0 0 0 0 1.0748E-07 1 61705 76.341 66.284 2 5879 847 3040 3380 9562 9562 1456 SVGGSGGGSFGDNLVTR 17 0 1 Phospho (STY) _SVGGSGGGS(ph)FGDNLVTR_ SVGGSGGGS(1)FGDNLVTR S(-98.29)VGGS(-36.91)GGGS(36.91)FGDNLVT(-62.49)R 0 0 1 0 P02545;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 823.8617 2 823.862141 1645.70973 66903.55 0.79284 0.00065319 -0.046416 -3.824E-05 0.74643 0.00061495 823.862102089617 828.866219553477 85.705 1.6699 85.705 84.808 86.478 0 1000 160 8 0 0 0 2.6338E-43 5 46237 142.3 124.03 4 1.1118 1.4059 0 237340000 114460000 122880000 5880 954 3041 3381 9563;9564;9565;9566;9567 9566 1662;1663 SVGGSGGGSFGDNLVTR 17 0 1 Phospho (STY) _SVGGS(ph)GGGSFGDNLVTR_ S(0.001)VGGS(0.999)GGGSFGDNLVTR S(-31.27)VGGS(31.27)GGGS(-39.69)FGDNLVT(-81.05)R 0 0 1 0 P02545;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 829.3677 2 823.862141 1645.70973 NaN NaN NaN 0.54221 0.0004467 NaN NaN NaN NaN 86.823 0.88274 86.823 86.346 87.228 0 0 0 0 6.7768E-22 1 46912 107.34 86.876 4 NaN NaN 0 17673000 0 17673000 5881 954 3041 3381 9568 9568 1662;1663 SVGGSGGGSFGDNLVTR 17 0 1 Phospho (STY) _SVGGSGGGS(ph)FGDNLVTR_ SVGGS(0.02)GGGS(0.98)FGDNLVTR S(-43.59)VGGS(-16.92)GGGS(16.92)FGDNLVT(-39.21)R 0 0 1 0 P02545;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 823.8634 2 823.862141 1645.70973 67039.76 1.0867 0.00089533 -0.088223 -7.2684E-05 0.99852 0.00082264 823.862223678307 828.866273095679 88.27 2.4251 88.27 86.873 89.298 0 1260 234 9 0 0 0 2.5888E-09 2 57106 83.253 74.298 4 1.0136 0.67259 0 189460000 95530000 93928000 5882 954 3041 3381 9569;9570 9570 1662;1663 SVGGSGGGSFGDNLVTR 17 0 1 Phospho (STY) _SVGGS(ph)GGGSFGDNLVTR_ S(0.142)VGGS(0.845)GGGS(0.013)FGDNLVTR S(-7.73)VGGS(7.73)GGGS(-18.19)FGDNLVT(-41.3)R 0 0 1 0 P02545;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 824.3644 2 823.862141 1645.70973 66996.13 1.1831 0.00097474 0.25831 0.00021281 1.4414 0.0011876 823.862285148897 828.866239528504 89.876 1.3796 89.876 89.175 90.554 0 705 132 8 0 0 0 0.0001249 3 57638 51.495 45.018 4 0.78851 0.55808 0 31073000 15469000 15604000 5883 954 3041 3381 9571;9572;9573 9571 1662;1663 SVGGSGGGSFGDNLVTR 17 0 1 2 Phospho (STY) _SVGGS(ph)GGGS(ph)FGDNLVTR_ S(0.007)VGGS(0.994)GGGS(0.996)FGDNLVT(0.002)R S(-22.61)VGGS(22.61)GGGS(26.72)FGDNLVT(-26.72)R 0 0 2 0 P02545;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 868.8502 2 863.845306 1725.67606 65714.86 0.99327 0.00085803 0.39194 0.00033858 1.3852 0.0011966 863.845423245258 868.849957590678 94.375 0.80619 94.375 93.945 94.752 -7.6294E-06 208 64 5 0 0 0 4.9915E-05 1 52595 55.589 39.335 6 0.87164 1.0716 0 28193000 14016000 14178000 5884 954 3041 3382 9574 9574 1662;1663 SVICDISPLR 10 0 1 Phospho (STY) _SVICDIS(ph)PLR_ SVICDIS(1)PLR S(-98.63)VICDIS(98.63)PLR 0 0 1 0 W5ZR30;Q9UGU0 W5ZR30 W5ZR30 TCF20 Transcription factor 20 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 620.2953 2 620.293788 1238.57302 76590.57 1.3615 0.00084451 -0.37842 -0.00023473 0.98306 0.00060978 620.293537533423 625.297792591428 102.43 0.99741 102.43 101.96 102.95 7.6294E-06 228 75 4 0 0 0 4.526E-06 3 58807 107.85 91.314 2 0.75502 0.91753 0 20453000 11943000 8510100 5885 1227 3042 3383 9575;9576;9577 9575 2501 SVICDISPLR 10 0 1 Phospho (STY) _SVICDIS(ph)PLR_ SVICDIS(1)PLR S(-90.83)VICDIS(90.83)PLR 0 0 1 0 W5ZR30;Q9UGU0 W5ZR30 W5ZR30 TCF20 Transcription factor 20 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 625.2985 2 620.293788 1238.57302 76794.46 1.0997 0.00068217 -0.24732 -0.00015341 0.85242 0.00052875 620.293790473292 625.297814809826 107.32 1.1235 107.32 106.75 107.87 -7.6294E-06 528 106 7 0 0 0 4.0303E-06 3 69247 106.49 83.772 2 2.6233 1.8427 0 33678000 9608900 24069000 5886 1227 3042 3383 9578;9579;9580 9580 2501 SVLFGLMNSGTPEDSEFR 18 0 1 Oxidation (M),2 Phospho (STY) _SVLFGLM(ox)NS(ph)GT(ph)PEDSEFR_ SVLFGLM(1)NSGTPEDSEFR S(0.015)VLFGLMNS(0.991)GT(0.986)PEDS(0.008)EFR SVLFGLM(41.41)NSGTPEDSEFR S(-21.32)VLFGLMNS(21.32)GT(21.32)PEDS(-21.86)EFR 0 1 2 0 A0PJ70;A8K9K0;Q8TF76 A0PJ70 A0PJ70 GSG2 Serine/threonine-protein kinase haspin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1086.4329 2 1081.43109 2160.84762 59923.2 0.21705 0.00023472 -0.021207 -2.2934E-05 0.19584 0.00021179 1081.43132883121 1086.93672402484 132.03 1.0438 132.03 131.32 132.36 0 561 91 7 0 0 0 0.00051586 1 79948 41.412 35.226 6 0.92018 1.1313 0 28337000 13561000 14777000 5887 400 3043 3384 9581 9581 100 687;2717 SVLTSPVANGVNLDYDGLGK 20 1 0 Phospho (STY) _SVLT(ph)SPVANGVNLDYDGLGK_ S(0.184)VLT(0.408)S(0.408)PVANGVNLDYDGLGK S(-3.46)VLT(0)S(0)PVANGVNLDY(-45.37)DGLGK 0 0 1 0 I3VM54;I3VM53;Q9Y2K7 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1050.0087 2 1050.00646 2097.99837 61950.39 0.55475 0.00058249 0.53984 0.00056684 1.0946 0.0011493 1050.50845105805 1054.51648971693 122.38 0.53484 122.38 122.08 122.62 0 145 39 5 0 0 0 4.1151E-06 2 73837 55.724 48 4 0.38354 0.46827 0 18848000 11217000 7630600 5888 888 3044 3385 9582;9583 9583 1501;1502;2839 SVLTSPVANGVNLDYDGLGK 20 1 0 Phospho (STY) _S(ph)VLTSPVANGVNLDYDGLGK_ S(0.4)VLT(0.3)S(0.3)PVANGVNLDYDGLGK S(1.24)VLT(-1.24)S(-1.24)PVANGVNLDY(-35.64)DGLGK 0 0 1 0 I3VM54;I3VM53;Q9Y2K7 I3VM54 I3VM54 KDM2A Lysine-specific demethylase 2A ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1050.5077 2 1050.00646 2097.99837 NaN NaN NaN -0.1032 -0.00010836 NaN NaN NaN NaN 131.83 0.39224 131.83 131.64 132.03 0 0 0 0 0.00073828 1 85046 43.813 31.046 4 NaN NaN 0 7543300 7543300 0 5889 888 3044 3385 9584 9584 1501;1502;2839 SVPGTTSSPLVGDISPK 17 1 0 Phospho (STY) _SVPGTTSSPLVGDIS(ph)PK_ SVPGTTSSPLVGDIS(1)PK S(-148.97)VPGT(-111.15)T(-100.42)S(-89.2)S(-77.58)PLVGDIS(77.58)PK 0 0 1 0 H0Y6S1;B4DRC2;B4DZR9;Q9UQR0 H0Y6S1 H0Y6S1 SCML2 Sex comb on midleg-like protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 861.4229 2 861.4215 1720.82845 65902.05 1.5794 0.0013605 0.16672 0.00014361 1.7461 0.0015041 861.421455025496 865.428732497427 100.81 1.1824 100.81 100.2 101.38 0 515 90 9 0 0 0 1.8751E-51 2 57628 152.01 152.01 6 0.69275 0.86026 0 100410000 58253000 42152000 5890 654 3045 3386 9585;9586 9586 1088;1089;1090 SVPGTTSSPLVGDISPK 17 1 0 Phospho (STY) _SVPGTTSSPLVGDIS(ph)PK_ SVPGTTS(0.001)S(0.002)PLVGDIS(0.997)PK S(-57.82)VPGT(-48.15)T(-36.27)S(-30.22)S(-27.45)PLVGDIS(27.45)PK 0 0 1 0 H0Y6S1;B4DRC2;B4DZR9;Q9UQR0 H0Y6S1 H0Y6S1 SCML2 Sex comb on midleg-like protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 861.4224 2 861.4215 1720.82845 65532.25 1.1304 0.00097375 -0.17143 -0.00014767 0.95897 0.00082608 861.421728081978 865.428134325771 106.56 1.771 106.56 105.35 107.12 0 869 168 10 0 0 0 6.0466E-05 1 68556 58.427 58.427 6 1.0534 0.70202 0 102830000 54507000 48327000 5891 654 3045 3386 9587 9587 1088;1089;1090 SVPGTTSSPLVGDISPK 17 1 0 2 Phospho (STY) _SVPGTTSS(ph)PLVGDIS(ph)PK_ SVPGTT(0.001)S(0.211)S(0.788)PLVGDIS(1)PK S(-68.2)VPGT(-34.15)T(-27.6)S(-5.73)S(5.73)PLVGDIS(60.95)PK 0 0 2 0 H0Y6S1;B4DRC2;B4DZR9;Q9UQR0 H0Y6S1 H0Y6S1 SCML2 Sex comb on midleg-like protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 901.4062 2 901.404665 1800.79478 63869.12 1.3094 0.0011803 0.70389 0.00063449 2.0133 0.0018148 901.405161227248 905.41227344085 102.98 1.3799 102.98 102.44 103.82 0 621 99 10 0 0 0 2.2482E-16 5 59123 103.9 90.501 15 0.61969 0.7668 0 246520000 148020000 98500000 5892 654 3045 3387 9588;9589;9590;9591;9592 9590 1088;1089;1090 SVPGTTSSPLVGDISPK 17 1 0 2 Phospho (STY) _SVPGTTS(ph)SPLVGDIS(ph)PK_ SVPGT(0.001)T(0.002)S(0.645)S(0.352)PLVGDIS(1)PK S(-59.96)VPGT(-28.15)T(-24.94)S(2.64)S(-2.64)PLVGDIS(41.99)PK 0 0 2 0 H0Y6S1;B4DRC2;B4DZR9;Q9UQR0 H0Y6S1 H0Y6S1 SCML2 Sex comb on midleg-like protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 905.413 2 901.404665 1800.79478 63970.7 1.2404 0.0011181 0.309 0.00027853 1.5494 0.0013966 901.405021588895 905.412047926643 113.17 1.2479 113.17 112.69 113.94 0 830 116 11 0 0 0 1.2695E-16 2 72651 106.67 87.423 15 1.3252 0.88558 0 184290000 80374000 103910000 5893 654 3045 3387 9593;9594 9594 1088;1089;1090 SVPVNNLPERSPTDSPR 17 0 2 2 Phospho (STY) _SVPVNNLPERS(ph)PTDS(ph)PR_ S(0.019)VPVNNLPERS(0.953)PT(0.106)DS(0.921)PR S(-16.9)VPVNNLPERS(15.02)PT(-10.55)DS(10.55)PR 0 0 2 1 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1012.9457 2 1012.94555 2023.87655 63662.09 0.22775 0.0002307 0.16677 0.00016893 0.39452 0.00039963 1012.94593833567 1022.9541386652 67.371 0.44771 67.371 67.187 67.634 0 166 39 6 0 0 0 0.00013293 2 33023 46.663 34.797 6 1.0805 1.3177 0 20812000 9742900 11070000 5894 999 3046 3388 9595;9596 9595 1815;1816;2897 SVPVNNLPERSPTDSPR 17 0 2 2 Phospho (STY) _SVPVNNLPERS(ph)PT(ph)DSPR_ SVPVNNLPERS(0.98)PT(0.602)DS(0.418)PR S(-38.82)VPVNNLPERS(14.55)PT(1.65)DS(-1.65)PR 0 0 2 1 P49454 P49454 P49454 CENPF Centromere protein F ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 682.9738 3 675.632793 2023.87655 NaN NaN NaN -0.90132 -0.00060896 NaN NaN NaN NaN 66.728 1.0782 66.728 66.014 67.093 0 0 0 0 0.00014045 1 41830 48.229 34.333 6 NaN NaN 0 16363000 0 16363000 5895 999 3046 3388 9597 9597 1815;1816;2897 SVPVNNLPERSPTDSPR 17 0 2 Phospho (STY) _SVPVNNLPERS(ph)PTDSPR_ S(0.001)VPVNNLPERS(0.795)PT(0.167)DS(0.038)PR S(-31.97)VPVNNLPERS(6.79)PT(-6.79)DS(-13.23)PR 0 0 1 1 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 649.3148 3 648.977349 1943.91022 77015.92 0.55829 0.00036232 0.82194 0.00053342 1.3802 0.00089574 649.311604362585 655.650546810438 68.802 0.38161 68.802 68.633 69.015 7.6294E-06 90 36 4 0 0 0 0.00033512 1 34162 41.136 35.818 4 0.81672 1.0088 0 31056000 13200000 17855000 5896 999 3046 3389 9598 9598 1815;1816;2897 SVPVNNLPERSPTDSPR 17 0 2 Phospho (STY) _SVPVNNLPERS(ph)PTDSPR_ SVPVNNLPERS(0.776)PT(0.18)DS(0.044)PR S(-49.95)VPVNNLPERS(6.34)PT(-6.34)DS(-12.49)PR 0 0 1 1 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 648.9785 3 648.977349 1943.91022 77245.09 0.68038 0.00044155 -0.17085 -0.00011088 0.50953 0.00033067 649.311251363351 655.64984568825 69.372 0.75061 69.372 68.894 69.645 0 188 73 5 0 0 0 2.6021E-05 3 34651 54.658 46.159 4 0.75483 0.92738 0 26273000 13799000 12474000 5897 999 3046 3389 9599;9600;9601 9601 1815;1816;2897 SVPVNNLPERSPTDSPR 17 0 2 Phospho (STY) _SVPVNNLPERS(ph)PTDSPR_ SVPVNNLPERS(0.729)PT(0.199)DS(0.072)PR S(-46.13)VPVNNLPERS(5.65)PT(-5.65)DS(-10.05)PR 0 0 1 1 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 649.3127 3 648.977349 1943.91022 76098.62 1.3327 0.00086489 -0.43686 -0.00028351 0.89584 0.00058138 648.97705916553 655.649207992653 59.289 1.6839 59.289 58.316 60 0 878 158 8 0 0 0 2.5881E-05 2 36810 54.834 43.314 4 1.1441 0.99069 0 37629000 16119000 21510000 5898 999 3046 3389 9602;9603 9603 1815;1816;2897 SVPVTVDDDDDDNDPENR 18 0 1 Unmodified _SVPVTVDDDDDDNDPENR_ 0 0 0 0 A4LAA3;P46100;A0A096LNL9;B7Z1D8;A0A096LP59 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1008.9147 2 1008.91688 2015.8192 NaN NaN NaN 0.17762 0.0001792 NaN NaN NaN NaN 64.169 0.39728 64.169 63.867 64.265 0 0 0 0 0.0027012 1 30342 42.789 24.98 1 NaN NaN 0 6721800 6721800 0 5899 422 3047 3390 9604 9604 SVQEGENPDDGVRGSPPEDYR 21 0 2 Phospho (STY) _SVQEGENPDDGVRGS(ph)PPEDYR_ SVQEGENPDDGVRGS(1)PPEDYR S(-115.04)VQEGENPDDGVRGS(64.16)PPEDY(-64.16)R 0 0 1 1 Q5TCT4;A2A2V2;P42696;H7C5M1 Q5TCT4 Q5TCT4 RBM34 RNA-binding protein 34 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 795.3342 3 794.999319 2381.97613 68163.66 0.8785 0.00069841 -0.23135 -0.00018393 0.64715 0.00051448 795.333408973233 801.671369261862 61.542 1.4229 61.542 60.904 62.327 3.8147E-06 777 101 10 0 0 0 6.795E-46 4 28742 128.36 128.36 3 0.98427 1.228 0 171790000 87044000 84747000 5900 404 3048 3391 9605;9606;9607;9608 9607 692 SVQIAYHR 8 0 1 Phospho (STY) _S(ph)VQIAYHR_ S(1)VQIAYHR S(72.41)VQIAY(-72.41)HR 0 0 1 0 P55201 P55201 P55201 BRPF1 Peregrin ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 532.2518 2 527.247499 1052.48044 NaN NaN NaN 0.52137 0.00027489 NaN NaN NaN NaN 62.818 1.1633 62.818 61.913 63.076 0 0 0 0 0.00078861 1 29452 80.755 44.33 2 NaN NaN 0 10294000 0 10294000 5901 1009 3049 3392 9609 9609 1840 SVQIAYHR 8 0 1 Phospho (STY) _S(ph)VQIAYHR_ S(1)VQIAYHR S(43.78)VQIAY(-43.78)HR 0 0 1 0 P55201 P55201 P55201 BRPF1 Peregrin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 532.252 2 527.247499 1052.48044 83534.41 0.80777 0.0004259 -0.10683 -5.6324E-05 0.70095 0.00036957 527.247429159917 532.251469957367 35.746 0.78154 35.746 35.453 36.235 0 330 63 8 0 0 0 0.020483 2 19931 50.978 40.104 2 1.7986 1.2118 0 89021000 28213000 60808000 5902 1009 3049 3392 9610;9611 9610 1840 SVSEINSDDELSGK 14 1 0 Phospho (STY) _SVSEINS(ph)DDELSGK_ SVS(0.006)EINS(0.953)DDELS(0.041)GK S(-36.25)VS(-21.86)EINS(13.71)DDELS(-13.71)GK 0 0 1 0 Q6PII6;F8WF45;B4DQY7;A0A024R370;P82094 Q6PII6 Q6PII6 TMF1 TATA element modulatory factor MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 784.3343 2 780.327265 1558.63998 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.049 1 62.049 61.549 62.549 0 0 0 0 0.00087081 1 28859 50.155 30.316 4 5903 73 3050 3393 9612 9612 93 SVSLVGEDERK 11 1 1 Unmodified _SVSLVGEDERK_ 0 0 0 1 B3GQE6;Q53G15;B7Z6D5;Q96GQ7 B3GQE6 B3GQE6 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 609.82 2 609.819867 1217.62518 78501.92 0.73458 0.00044796 -0.037001 -2.2564E-05 0.69758 0.0004254 609.81972954577 618.83114726126 75.888 0.46899 75.888 75.625 76.094 0 189 41 6 0 0 0 0.0014007 1 39062 86.882 67.611 1 0.73893 0.87413 0 48634000 26881000 21752000 5904 566 3051 3394 9613 9613 SVSPESNDSISEELNHFK 18 1 0 Phospho (STY) _SVS(ph)PESNDSISEELNHFK_ S(0.12)VS(0.879)PES(0.001)NDS(0.001)ISEELNHFK S(-8.64)VS(8.64)PES(-31.8)NDS(-31.8)IS(-43.38)EELNHFK 0 0 1 0 Q8NCN4 Q8NCN4 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 700.3039 3 700.303679 2097.88921 NaN NaN NaN -0.35405 -0.00024794 NaN NaN NaN NaN 105.34 0.48228 105.34 105.09 105.57 0 0 0 0 2.9853E-07 1 61055 64.507 53.207 5 NaN NaN 0 8136600 8136600 0 5905 1157 3052 3395 9614 9614 2230 SVSPLLSTHVLGK 13 1 0 2 Phospho (STY) _S(ph)VS(ph)PLLSTHVLGK_ S(1)VS(1)PLLSTHVLGK S(49.27)VS(46.4)PLLS(-46.4)T(-46.88)HVLGK 0 0 2 0 X6RL08;X6R907;A0A024R171;Q96H12 X6RL08 X6RL08 MSANTD3;C9orf30 Myb/SANT-like DNA-binding domain-containing protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 749.36 2 749.359332 1496.70411 71137.08 0.73466 0.00055052 -0.34799 -0.00026077 0.38667 0.00028975 749.359530134114 753.366135685898 114.87 0.72 114.87 114.45 115.17 0 323 63 7 0 0 0 0.0012579 1 68314 70.332 70.332 6 0.74744 0.91704 0 21254000 14349000 6905300 5906 41 3053 3396 9615 9615 48;49 SVVSDLEADDVK 12 1 0 Unmodified _SVVSDLEADDVK_ 0 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 642.8239 2 638.81699 1275.61943 78802.87 1.1575 0.00073944 -0.36602 -0.00023382 0.7915 0.00050563 638.816733981024 642.823872580087 90.003 0.56107 90.003 89.726 90.287 0 132 48 4 0 0 0 0.002421 2 49373 80.763 80.763 1 0.78809 0.97198 0 23123000 10804000 12319000 5907 962 3054 3397 9616;9617 9617 SVVSDLEADDVK 12 1 0 Unmodified _SVVSDLEADDVK_ 0 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 638.8173 2 638.81699 1275.61943 77846.86 1.294 0.00082662 0.31558 0.0002016 1.6096 0.0010282 638.817117035719 642.824063072165 90.555 0.1623 90.555 90.444 90.606 0 42 13 4 0 0 0 5.0712E-09 1 49856 105.86 93.275 1 0.72131 0.91417 0 33522000 20315000 13206000 5908 962 3054 3397 9618 9618 SVVSDLEADDVK 12 1 0 Unmodified _SVVSDLEADDVK_ 0 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 642.8253 2 638.81699 1275.61943 80760.91 1.3408 0.00085652 0.090127 5.7575E-05 1.4309 0.0009141 638.816923416993 642.82415821346 90.666 0.37786 90.666 90.606 90.984 -7.6294E-06 61 33 4 0 0 0 0.019803 1 49955 64.439 64.439 1 0.56992 0.68496 0 15513000 7635800 7877700 5909 962 3054 3397 9619 9619 SVVSDLEADDVK 12 1 0 Unmodified _SVVSDLEADDVK_ 0 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 638.8163 2 638.81699 1275.61943 74095.67 1.0792 0.00068938 -1.4741 -0.00094167 -0.39493 -0.00025229 638.816138484694 642.82278530055 82.395 1.0254 82.395 81.77 82.796 0 305 94 6 0 0 0 0.00076886 1 52734 87.568 87.568 1 1.4549 0.94956 0 44887000 18480000 26407000 5910 962 3054 3397 9620 9620 SVVSDLEADDVK 12 1 0 Phospho (STY) _SVVS(ph)DLEADDVK_ SVVS(1)DLEADDVK S(-51.49)VVS(51.49)DLEADDVK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 678.8008 2 678.800155 1355.58576 74004.48 0.78738 0.00053447 -0.17145 -0.00011638 0.61592 0.00041809 678.800469411939 682.806970370546 104.42 3.0364 104.42 103.58 106.62 0 1468 211 10 0 0 0 2.4397E-33 6 60580 156.08 131.31 2 0.87345 1.0747 0 3303900000 1729900000 1574000000 5911 962 3054 3398 9621;9622;9623;9624;9625;9626 9624 1703;1704 SVVSDLEADDVK 12 1 0 Phospho (STY) _S(ph)VVSDLEADDVK_ S(1)VVSDLEADDVK S(33.61)VVS(-33.61)DLEADDVK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 682.8073 2 678.800155 1355.58576 NaN NaN NaN 0.0070976 4.8178E-06 NaN NaN NaN NaN 87.307 0.68091 87.307 87.187 87.867 -7.6294E-06 0 0 0 0.00091861 1 47771 78.964 48.633 2 NaN NaN 0 10293000 0 10293000 5912 962 3054 3398 9627 9627 1703;1704 SVVSDLEADDVK 12 1 0 Phospho (STY) _SVVS(ph)DLEADDVK_ S(0.001)VVS(0.999)DLEADDVK S(-28.56)VVS(28.56)DLEADDVK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 682.808 2 678.800155 1355.58576 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.262 1 99.262 98.762 99.762 -7.6294E-06 0 0 0 0.0005154 1 56555 60.401 38.642 2 5913 962 3054 3398 9628 9628 1703;1704 SVVSDLEADDVK 12 1 0 Phospho (STY) _SVVS(ph)DLEADDVK_ S(0.008)VVS(0.992)DLEADDVK S(-21.05)VVS(21.05)DLEADDVK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 678.8009 2 678.800155 1355.58576 NaN NaN NaN NaN NaN NaN NaN NaN NaN 107.39 1 107.39 106.89 107.89 0 0 0 0 0.0060312 1 62675 44.425 23.585 2 5914 962 3054 3398 9629 9629 1703;1704 SVVSDLEADDVK 12 1 0 Phospho (STY) _SVVS(ph)DLEADDVK_ SVVS(1)DLEADDVK S(-41.57)VVS(41.57)DLEADDVK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 682.8083 2 678.800155 1355.58576 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.03 1 109.03 108.53 109.53 -7.6294E-06 0 0 0 0.003559 1 64029 91.858 60.986 2 5915 962 3054 3398 9630 9630 1703;1704 SVVSDLEADDVK 12 1 0 Phospho (STY) _SVVS(ph)DLEADDVK_ SVVS(1)DLEADDVK S(-38.18)VVS(38.18)DLEADDVK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 678.8015 2 678.800155 1355.58576 NaN NaN NaN NaN NaN NaN NaN NaN NaN 109.14 1 109.14 108.64 109.64 0 0 0 0 2.5144E-05 1 64119 79.466 64.265 2 5916 962 3054 3398 9631 9631 1703;1704 SVVSDLEADDVK 12 1 0 Phospho (STY) _SVVS(ph)DLEADDVK_ S(0.004)VVS(0.996)DLEADDVK S(-24.09)VVS(24.09)DLEADDVK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 682.8081 2 678.800155 1355.58576 NaN NaN NaN NaN NaN NaN NaN NaN NaN 145.29 1 145.29 144.79 145.79 0 0 0 0 0.011388 1 83669 42.426 20.667 2 5917 962 3054 3398 9632 9632 1703;1704 SVVSDLEADDVK 12 1 0 Phospho (STY) _SVVS(ph)DLEADDVK_ SVVS(1)DLEADDVK S(-44.6)VVS(44.6)DLEADDVK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 682.8073 2 678.800155 1355.58576 73374.14 1.1477 0.00077909 -0.34699 -0.00023554 0.80075 0.00054355 678.801208414329 682.807014324803 110.67 3.1371 110.67 110 113.14 0 1985 299 11 0 0 0 2.0101E-06 5 71406 98.942 81.711 2 1.236 0.82217 0 2954000000 1327600000 1626400000 5918 962 3054 3398 9633;9634;9635;9636;9637 9635 1703;1704 SVVSDLEADDVK 12 1 0 Phospho (STY) _SVVS(ph)DLEADDVK_ S(0.003)VVS(0.997)DLEADDVK S(-24.7)VVS(24.7)DLEADDVK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 682.8077 2 678.800155 1355.58576 74089.92 1.1276 0.00076541 0.24975 0.00016953 1.3773 0.00093494 679.302064047733 682.806943754787 113.14 0.67527 113.14 112.87 113.54 -7.6294E-06 139 62 5 0 0 0 0.010796 1 72641 46.282 35.452 2 1.2689 1.0183 0 6450900 3484900 2966000 5919 962 3054 3398 9638 9638 1703;1704 SVVSDLEADDVK 12 1 0 Phospho (STY) _S(ph)VVSDLEADDVK_ S(0.999)VVS(0.001)DLEADDVK S(28.87)VVS(-28.87)DLEADDVK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 682.8077 2 678.800155 1355.58576 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.984 1 91.984 91.484 92.484 0 0 0 0 0.0037051 1 59297 48.527 32.988 2 5920 962 3054 3398 9639 9639 1703;1704 SVVSDLEADDVK 12 1 0 2 Phospho (STY) _S(ph)VVS(ph)DLEADDVK_ S(1)VVS(1)DLEADDVK S(99.94)VVS(99.94)DLEADDVK 0 0 2 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 722.7917 2 718.78332 1435.55209 72380.1 0.90309 0.00064913 -0.034349 -2.469E-05 0.86874 0.00062444 718.783248909478 722.790337202684 104.62 1.3031 104.62 104.02 105.32 -7.6294E-06 454 93 7 0 0 0 7.2185E-07 3 60342 99.941 87.151 1 1.6149 2.0083 0 83204000 32331000 50874000 5921 962 3054 3399 9640;9641;9642 9640 1703;1704 SVYATMGDHENRSPVK 16 1 1 Oxidation (M),Phospho (STY) _SVYATM(ox)GDHENRS(ph)PVK_ SVYATM(1)GDHENRSPVK SVYAT(0.09)MGDHENRS(0.91)PVK SVYATM(51.57)GDHENRSPVK S(-47.79)VY(-35.75)AT(-10.05)MGDHENRS(10.05)PVK 0 1 1 1 Q96T58 Q96T58 Q96T58 SPEN Msx2-interacting protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 629.9426 3 629.608269 1885.80298 76078.86 0.84424 0.00053154 -0.40233 -0.00025331 0.44191 0.00027823 629.608283213768 635.615521516323 19.16 0.26365 19.16 19.023 19.287 0 51 9 9 0 0 0 7.9785E-05 1 6155 51.566 36.797 4 1.2718 0.97675 0 29039000 12705000 16334000 5922 1189 3055 3400 9643 9643 330 2353 SWASPVYTEADGTFSR 16 0 1 Phospho (STY) _SWAS(ph)PVYTEADGTFSR_ S(0.001)WAS(0.999)PVYTEADGTFSR S(-28.75)WAS(28.75)PVY(-39.25)T(-47.08)EADGT(-72.86)FS(-72.31)R 0 0 1 0 E9PMS6;B7Z8W3;A0A1P7ZIM8;E9PMP7;E9PJ10;E9PLU6;E9PK58 E9PMS6 E9PMS6 LMO7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 932.8965 2 927.390731 1852.76691 62750.96 0.65053 0.00060329 0.1236 0.00011463 0.77413 0.00071792 927.391370786379 932.394544489681 109.82 0.5102 109.82 109.6 110.11 0 140 37 5 0 0 0 4.3192E-09 1 64730 84.508 75.319 6 1.9621 2.3424 0 16471000 6143600 10327000 5923 391 3056 3401 9644 9644 668 SWEETPAAESPAGR 14 0 1 2 Phospho (STY) _S(ph)WEETPAAES(ph)PAGR_ S(1)WEET(0.002)PAAES(0.998)PAGR S(44.05)WEET(-26.38)PAAES(26.38)PAGR 0 0 2 0 B3KVD4;Q9P1Z0 B3KVD4 B3KVD4 ZBTB4 Zinc finger and BTB domain-containing protein 4 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 824.3098 2 824.308025 1646.6015 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.696 1 64.696 64.196 65.196 0 0 0 0 6.0474E-07 1 30881 70.197 55.035 3 5924 603 3057 3402 9645 9645 991;992 SYCAEIAHNVSSK 13 1 0 Unmodified _SYCAEIAHNVSSK_ 0 0 0 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 733.3408 2 733.34064 1464.66673 70743.82 0.9953 0.00072989 -0.20219 -0.00014828 0.79311 0.00058162 733.340497699799 737.347697233412 77.025 1.0673 77.025 76.726 77.794 0 410 93 6 0 0 0 4.9661E-53 2 40091 172.11 155.17 1 0.89142 1.1064 0 107730000 54405000 53325000 5925 64 3058 3403 9646;9647 9647 SYCAEIAHNVSSK 13 1 0 Unmodified _SYCAEIAHNVSSK_ 0 0 0 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 489.2295 3 489.229519 1464.66673 87594.35 0.31496 0.00015409 -0.46458 -0.00022729 -0.14962 -7.3199E-05 489.229454447873 491.900881633131 77.061 0.99237 77.061 76.762 77.755 0 296 86 6 0 0 0 0.0021649 2 39930 43.229 41.145 1 0.73955 0.93344 0 47594000 26096000 21498000 5926 64 3058 3403 9648;9649 9648 SYCAEIAHNVSSK 13 1 0 Unmodified _SYCAEIAHNVSSK_ 0 0 0 0 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 D3YTB1 RPL32 60S ribosomal protein L32 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 733.3422 2 733.34064 1464.66673 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.884 1 77.884 77.384 78.384 0 0 0 0 0.027641 1 40700 52.391 41.239 1 5927 64 3058 3403 9650 9650 SYDANTVASFYTTK 14 1 0 Phospho (STY) _S(ph)YDANTVASFYTTK_ S(0.973)Y(0.027)DANTVASFYTTK S(15.51)Y(-15.51)DANT(-43.87)VAS(-53.8)FY(-56.81)T(-58.13)T(-58.13)K 0 0 1 0 B7ZML1;Q3L8U1;Q5JB41;A0A087WU44;Q461N2 B7ZML1 B7ZML1 CHD9 Chromodomain-helicase-DNA-binding protein 9 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 824.3746 2 824.350543 1646.68653 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.633 1 99.633 99.133 100.13 0 0 0 0 4.6219E-05 1 56851 58.32 37.02 7 5928 724 3059 3404 9651 9651 1195 SYDANTVASFYTTK 14 1 0 Phospho (STY) _S(ph)YDANTVASFYTTK_ S(0.909)Y(0.091)DANTVASFYTTK S(10.01)Y(-10.01)DANT(-44.08)VAS(-67.23)FY(-73.37)T(-78.57)T(-81.91)K 0 0 1 0 B7ZML1;Q3L8U1;Q5JB41;A0A087WU44;Q461N2 B7ZML1 B7ZML1 CHD9 Chromodomain-helicase-DNA-binding protein 9 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 828.3582 2 824.350543 1646.68653 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.648 1 99.648 99.148 100.15 0 0 0 0 2.0523E-05 1 56864 82.102 70.125 7 5929 724 3059 3404 9652 9652 1195 SYDANTVASFYTTK 14 1 0 Phospho (STY) _S(ph)YDANTVASFYTTK_ S(0.841)Y(0.145)DANT(0.013)VASFYTTK S(7.62)Y(-7.62)DANT(-18.01)VAS(-34.4)FY(-38.18)T(-40.09)T(-40.24)K 0 0 1 0 B7ZML1;Q3L8U1;Q5JB41;A0A087WU44;Q461N2 B7ZML1 B7ZML1 CHD9 Chromodomain-helicase-DNA-binding protein 9 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 828.3584 2 824.350543 1646.68653 66659.51 1.0879 0.00089681 -3.3264 -0.0027421 -2.2385 -0.0018453 824.847078322772 828.357494775534 105.75 0.90965 105.75 105.31 106.22 7.6294E-06 363 86 7 0 0 0 0.0059107 1 68005 40.242 36.479 7 0.42304 0.31539 0 9469800 5288000 4181800 5930 724 3059 3404 9653 9653 1195 SYELPDGQVITIGNER 16 0 1 Unmodified _SYELPDGQVITIGNER_ 0 0 0 0 B4E335;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;V9HVZ7;Q562R1;Q96DE1;Q96FU6;K4EQ44;K4EP00;K4ENJ5;F1BXA6;A4UCT3;A5GZ75;B3KPP5;Q9BYX7;G8FSY7;A0A173GMX0;B4E3A4;P63261;B4DVQ0;Q6S8J3;A5A3E0;B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;Q13707;B3KW67;A8K3K1;B4DUI8 B4E335;B4E3A4;B7Z6P1 B4E3A4 PS1TP5BP1;ACTB;ACTG1;HEL-176;ACTBL2;POTEKP;POTEE;POTEF;ACTA2;ACTG2;ACTA1;ACTC1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Beta-actin-like protein 2;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 900.9544 2 895.949598 1789.88464 65473.44 0.72841 0.00065262 0.15226 0.00013641 0.88067 0.00078904 896.451135969704 900.953979866914 111.71 0.89716 111.71 111.22 112.12 0 388 77 7 0 0 0 1.1242E-05 1 65953 72.958 72.958 1 1.7724 2.2305 0 48202000 15275000 32927000 5931 683;685;711 3060 3405 9654 9654 SYELPDGQVITIGNER 16 0 1 Unmodified _SYELPDGQVITIGNER_ 0 0 0 0 B4E335;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;V9HVZ7;Q562R1;Q96DE1;Q96FU6;K4EQ44;K4EP00;K4ENJ5;F1BXA6;A4UCT3;A5GZ75;B3KPP5;Q9BYX7;G8FSY7;A0A173GMX0;B4E3A4;P63261;B4DVQ0;Q6S8J3;A5A3E0;B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;Q13707;B3KW67;A8K3K1;B4DUI8 B4E335;B4E3A4;B7Z6P1 B4E3A4 PS1TP5BP1;ACTB;ACTG1;HEL-176;ACTBL2;POTEKP;POTEE;POTEF;ACTA2;ACTG2;ACTA1;ACTC1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Beta-actin-like protein 2;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 900.9547 2 895.949598 1789.88464 65790.36 1.2606 0.0011295 0.13912 0.00012465 1.3998 0.0012541 895.949329241873 900.953668447609 114.43 0.70624 114.43 114.03 114.74 -7.6294E-06 349 67 7 0 0 0 1.8342E-08 2 73594 82.543 75.662 1 2.3925 1.7968 0 20784000 6048000 14736000 5932 683;685;711 3060 3405 9655;9656 9655 SYELPDGQVITIGNER 16 0 1 Phospho (STY) _S(ph)YELPDGQVITIGNER_ S(0.94)Y(0.06)ELPDGQVITIGNER S(11.95)Y(-11.95)ELPDGQVIT(-91.05)IGNER 0 0 1 0 B4E335;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;V9HVZ7;Q562R1;Q96DE1;Q96FU6;K4EQ44;K4EP00;K4ENJ5;F1BXA6;A4UCT3;A5GZ75;B3KPP5;Q9BYX7;G8FSY7;A0A173GMX0;B4E3A4;P63261;B4DVQ0;Q6S8J3;A5A3E0;B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;Q13707;B3KW67;A8K3K1;B4DUI8 B4E335;B4E3A4;B7Z6P1 B4E3A4 PS1TP5BP1;ACTB;ACTG1;HEL-176;ACTBL2;POTEKP;POTEE;POTEF;ACTA2;ACTG2;ACTA1;ACTC1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Beta-actin-like protein 2;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 941.4391 2 935.932763 1869.85097 63478.86 0.7907 0.00074004 -0.5828 -0.00054546 0.2079 0.00019458 936.432772168973 941.438140788394 115.95 0.48206 115.95 115.67 116.16 -7.6294E-06 180 42 7 0 0 0 2.0156E-12 2 69208 99.566 85.903 3 1.4096 1.6702 0 14832000 6147800 8684600 5933 683;685;711 3060 3406 9657;9658 9657 1127 SYELPDGQVITIGNER 16 0 1 Phospho (STY) _S(ph)YELPDGQVITIGNER_ S(0.542)Y(0.458)ELPDGQVITIGNER S(0.73)Y(-0.73)ELPDGQVIT(-43.9)IGNER 0 0 1 0 B4E335;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;B3KUD3;B3KWQ3;Q6PJ43;B7ZAP6;V9HVZ7;Q562R1;Q96DE1;Q96FU6;K4EQ44;K4EP00;K4ENJ5;F1BXA6;A4UCT3;A5GZ75;B3KPP5;Q9BYX7;G8FSY7;A0A173GMX0;B4E3A4;P63261;B4DVQ0;Q6S8J3;A5A3E0;B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;Q13707;B3KW67;A8K3K1;B4DUI8 B4E335;B4E3A4;B7Z6P1 B4E3A4 PS1TP5BP1;ACTB;ACTG1;HEL-176;ACTBL2;POTEKP;POTEE;POTEF;ACTA2;ACTG2;ACTA1;ACTC1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Beta-actin-like protein 2;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 941.4403 2 935.932763 1869.85097 NaN NaN NaN 0.86045 0.00080533 NaN NaN NaN NaN 123.67 0.53454 123.67 123.41 123.94 -7.6294E-06 0 0 0 0.00059664 1 80036 47.915 35.999 3 NaN NaN 0 12474000 0 12474000 5934 683;685;711 3060 3406 9659 9659 1127 SYGEEDIPFYSSSTGK 16 1 0 Phospho (STY) _SYGEEDIPFYS(ph)SSTGK_ SYGEEDIPFY(0.009)S(0.248)S(0.248)S(0.248)T(0.248)GK S(-52.42)Y(-54.9)GEEDIPFY(-14.4)S(0)S(0)S(0)T(0)GK 0 0 1 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 923.8759 2 923.874579 1845.73461 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.57 1 103.57 103.07 104.07 0 0 0 0 0.00025778 1 59845 54.898 30.043 7 5935 1034 3061 3407 9660 9660 1902;1903;1904;2911 SYLEGSSDNQLK 12 1 0 Phospho (STY) _SYLEGS(ph)SDNQLK_ SYLEGS(0.645)S(0.355)DNQLK S(-63.17)Y(-63.64)LEGS(2.59)S(-2.59)DNQLK 0 0 1 0 E9PJ60;Q8TDR3;Q8NEH0;Q8IYV2;Q9UHI6 E9PJ60 E9PJ60 DDX20 Probable ATP-dependent RNA helicase DDX20 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 714.8101 2 710.803229 1419.5919 NaN NaN NaN NaN NaN NaN NaN NaN NaN 65.677 1 65.677 65.177 66.177 0 0 0 0 1.7665E-05 1 31705 74.392 51.017 4 5936 805 3062 3408 9661 9661 1386 SYLLGNSSPR 10 0 1 Phospho (STY) _SYLLGNS(ph)SPR_ SYLLGNS(0.5)S(0.5)PR S(-68.56)Y(-69.02)LLGNS(0)S(0)PR 0 0 1 0 P02545;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 587.2689 2 587.268628 1172.5227 80405.96 0.9011 0.00052919 0.036628 2.151E-05 0.93773 0.0005507 587.268560689846 592.272599738303 74.234 1.2532 74.234 73.864 75.117 0 313 111 5 0 0 0 0.00074032 2 47212 83.226 79.291 4 0.5866 0.46558 0 13202000 6964900 6237500 5937 954 3063 3409 9662;9663 9662 1664;1665 SYLLGNSSPR 10 0 1 Phospho (STY) _SYLLGNS(ph)SPR_ SYLLGNS(0.5)S(0.5)PR S(-41.24)Y(-41.35)LLGNS(0)S(0)PR 0 0 1 0 P02545;A0A0C4DGC5 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 587.27 2 587.268628 1172.5227 NaN NaN NaN -0.14242 -8.3639E-05 NaN NaN NaN NaN 74.176 0.84177 74.176 73.379 74.221 0 0 0 0 0.02807 1 46677 42.843 16.459 4 NaN NaN 0 9558900 9558900 0 5938 954 3063 3409 9664 9664 1664;1665 TAAPSPSLLYK 11 1 0 Phospho (STY) _TAAPS(ph)PSLLYK_ TAAPS(0.976)PS(0.024)LLYK T(-45.91)AAPS(16.18)PS(-16.18)LLY(-37.29)K 0 0 1 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 614.3049 2 614.304679 1226.59481 NaN NaN NaN 0.49258 0.00030259 NaN NaN NaN NaN 95.237 0.89897 95.237 94.695 95.594 -7.6294E-06 0 0 0 0.0009583 1 53517 75.378 32.132 4 NaN NaN 0 49392000 49392000 0 5939 1195 3064 3410 9665 9665 2374 TAAPSPSLLYK 11 1 0 Phospho (STY) _TAAPS(ph)PSLLYK_ TAAPS(0.863)PS(0.136)LLY(0.001)K T(-39.98)AAPS(8.02)PS(-8.02)LLY(-31.36)K 0 0 1 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 614.3051 2 614.304679 1226.59481 78032.59 0.95508 0.00058671 -0.061792 -3.7959E-05 0.89328 0.00054875 614.304540979835 618.311617483224 98.704 1.5416 98.704 98.159 99.7 7.6294E-06 818 147 9 0 0 0 0.0039363 4 63382 69.451 54.063 4 1.5323 1.0189 0 89635000 35855000 53780000 5940 1195 3064 3410 9666;9667;9668;9669 9667 2374 TADDSATSDYCPAPK 15 1 0 Phospho (STY) _TADDS(ph)ATSDYCPAPK_ TADDS(0.989)AT(0.01)S(0.001)DYCPAPK T(-36.39)ADDS(19.89)AT(-19.89)S(-30.98)DY(-51.04)CPAPK 0 0 1 0 Q59H79;Q9UBC3;B3KM53 Q59H79 Q59H79 DNMT3B DNA (cytosine-5)-methyltransferase 3B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 843.8271 2 839.81875 1677.62295 68042.09 1.0937 0.00091848 -0.026514 -2.2267E-05 1.0672 0.00089622 839.818683972307 843.825795031341 41.406 0.66101 41.406 41.096 41.757 0 237 56 6 0 0 0 6.5175E-05 1 24090 74.789 68.686 5 1.8683 1.459 0 13688000 5184700 8503200 5941 1093 3065 3411 9670 9670 2060 TADSSSSEDEEEYVVEK 17 1 0 Phospho (STY) _TADS(ph)SSSEDEEEYVVEK_ T(0.006)ADS(0.29)S(0.235)S(0.235)S(0.235)EDEEEYVVEK T(-16.9)ADS(0.91)S(-0.91)S(-0.91)S(-0.91)EDEEEY(-29.92)VVEK 0 0 1 0 V9HWG0;P45973;Q6I9T7;F8VNY3 V9HWG0 V9HWG0 HEL25;CBX5 Chromobox protein homolog 5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 992.3838 2 992.383162 1982.75177 62085.64 0.51157 0.00050767 0.51165 0.00050775 1.0232 0.0010154 992.38341223464 996.391955416266 63.428 1.237 63.428 62.786 64.023 0 274 100 5 0 0 0 3.8402E-05 2 30063 65.563 48.537 6 0.38323 0.485 0 32014000 20410000 11603000 5942 993 3066 3412 9671;9672 9672 1765;1766;1767;1768 TAEEENPEHVEIQK 14 1 0 Unmodified _TAEEENPEHVEIQK_ 0 0 0 0 O00566;B3KPV5 O00566 O00566 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 551.9316 3 551.596924 1651.76894 81614.73 0.59566 0.00032856 0.56072 0.00030929 1.1564 0.00063786 551.931697811804 554.268820829634 67.526 0.54848 67.526 67.286 67.835 0 151 48 5 0 0 0 0.0027403 1 33238 39.366 31.585 1 1.5769 2.0003 0 37225000 19219000 18006000 5943 917 3067 3413 9673 9673 TAESQTPTPSATSFFSGK 18 1 0 Phospho (STY) _TAESQT(ph)PTPSATSFFSGK_ T(0.115)AES(0.102)QT(0.651)PT(0.102)PS(0.02)AT(0.005)S(0.005)FFSGK T(-7.52)AES(-8.03)QT(7.52)PT(-8.03)PS(-15.06)AT(-21.56)S(-21.56)FFS(-37.21)GK 0 0 1 0 D3DV75;B7Z8Y3;H0YCK3;A0A024DAK3;Q59EC0;P55265 D3DV75 D3DV75 ADAR Double-stranded RNA-specific adenosine deaminase ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 966.4304 2 962.422228 1922.8299 NaN NaN NaN -0.45124 -0.00043428 NaN NaN NaN NaN 100.49 0.45889 100.49 100.14 100.6 0 0 0 0 0.0041397 1 57415 42.209 31.575 8 NaN NaN 0 5990300 0 5990300 5944 2 3068 3414 9674 9674 2613 TAFYNEDDSEEEQR 14 0 1 Phospho (STY) _TAFYNEDDS(ph)EEEQR_ TAFYNEDDS(1)EEEQR T(-68.23)AFY(-62.82)NEDDS(62.82)EEEQR 0 0 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 911.837 2 906.833443 1811.65233 64866.15 0.67036 0.0006079 -0.023247 -2.1081E-05 0.64711 0.00058682 907.334500803165 911.837636282264 55.068 1.1383 55.068 54.525 55.663 0 305 88 5 0 0 0 1.9243E-05 2 23727 81.632 75.391 3 0.7748 0.8945 0 12250000 7009600 5240000 5945 1167 3069 3415 9675;9676 9676 2271 TAFYNEDDSEEEQR 14 0 1 Phospho (STY) _TAFYNEDDS(ph)EEEQR_ TAFYNEDDS(1)EEEQR T(-204.22)AFY(-173.59)NEDDS(173.59)EEEQR 0 0 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 906.8351 2 906.833443 1811.65233 63373.3 0.77432 0.00070218 -0.077746 -7.0503E-05 0.69658 0.00063168 906.833710518506 911.837456031462 57.228 2.7391 57.228 56.073 58.812 0 1845 226 13 0 0 0 5.3812E-140 6 25119 221.59 203.53 3 0.74973 0.95124 0 1550800000 887190000 663580000 5946 1167 3069 3415 9677;9678;9679;9680;9681;9682 9679 2271 TAFYNEDDSEEEQR 14 0 1 Phospho (STY) _TAFYNEDDS(ph)EEEQR_ TAFYNEDDS(1)EEEQR T(-70.37)AFY(-53.84)NEDDS(53.84)EEEQR 0 0 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 906.8342 2 906.833443 1811.65233 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.883 1 58.883 58.383 59.383 -3.8147E-06 0 0 0 9.4136E-06 1 26252 77.068 66.872 3 5947 1167 3069 3415 9683 9683 2271 TAFYNEDDSEEEQR 14 0 1 Phospho (STY) _TAFYNEDDS(ph)EEEQR_ TAFYNEDDS(1)EEEQR T(-142.12)AFY(-107.63)NEDDS(107.63)EEEQR 0 0 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 906.8349 2 906.833443 1811.65233 63609.11 1.2106 0.0010978 0.017981 1.6306E-05 1.2286 0.0011141 906.833838315132 911.837628976659 51.723 3.6129 51.723 50.927 54.54 0 2083 316 12 0 0 0 2.452E-89 5 31513 192.32 183.13 3 1.4065 0.90183 0 1043000000 433790000 609240000 5948 1167 3069 3415 9684;9685;9686;9687;9688 9687 2271 TAHNSEAADLEESFNEHELEPSSPK 25 1 0 Phospho (STY) _TAHNSEAADLEESFNEHELEPS(ph)SPK_ TAHNSEAADLEES(0.05)FNEHELEPS(0.475)S(0.475)PK T(-50.78)AHNS(-50.82)EAADLEES(-9.82)FNEHELEPS(0)S(0)PK 0 0 1 0 A0A0D9SGE8;Q5JRC6 A0A0D9SGE8 A0A0D9SGE8 PHF6 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 715.059 4 712.804087 2847.18724 70976.78 0.90558 0.0006455 0.10666 7.6027E-05 1.0122 0.00072153 713.054814070854 715.058441984924 96.036 0.90999 96.036 95.699 96.609 7.6294E-06 764 89 12 0 0 0 1.0949E-09 2 61704 51.586 51.586 5 0.85895 0.57427 0 139740000 79688000 60055000 5949 335 3070 3416 9689;9690 9690 527;528 TAHNSEADLEESFNEHELEPSSPK 24 1 0 2 Phospho (STY) _TAHNSEADLEES(ph)FNEHELEPSS(ph)PK_ TAHNS(0.05)EADLEES(0.95)FNEHELEPS(0.378)S(0.622)PK T(-35.15)AHNS(-13.03)EADLEES(13.03)FNEHELEPS(-2.38)S(2.38)PK 0 0 2 0 Q8IWS0 Q8IWS0 Q8IWS0 PHF6 PHD finger protein 6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 953.3817 3 953.046096 2856.11646 62983.46 1.0326 0.00098414 -0.01558 -1.4849E-05 1.017 0.00096929 953.380471791463 956.051675465784 93.696 0.93929 93.696 93.156 94.095 7.6294E-06 470 77 9 0 0 0 8.749E-10 1 52029 54.581 48.354 10 0.36188 0.44975 0 90669000 68066000 22603000 5950 1145 3071 3417 9691 9691 2193;2194;2195 TAHNSEADLEESFNEHELEPSSPK 24 1 0 2 Phospho (STY) _TAHNSEADLEES(ph)FNEHELEPS(ph)SPK_ T(0.001)AHNS(0.004)EADLEES(0.995)FNEHELEPS(0.557)S(0.443)PK T(-32.01)AHNS(-23.85)EADLEES(23.85)FNEHELEPS(0.99)S(-0.99)PK 0 0 2 0 Q8IWS0 Q8IWS0 Q8IWS0 PHF6 PHD finger protein 6 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 956.0539 3 953.046096 2856.11646 62119.81 0.90878 0.00086611 -0.13975 -0.00013319 0.76904 0.00073293 953.380336941725 956.051793102029 88.655 0.84511 88.655 88.34 89.185 0 786 82 12 0 0 0 1.6388E-07 1 56974 47.058 47.058 10 0.95047 0.63521 0 175740000 81999000 93739000 5951 1145 3071 3417 9692 9692 2193;2194;2195 TAHNSEADLEESFNEHELEPSSPK 24 1 0 Phospho (STY) _TAHNSEADLEESFNEHELEPSS(ph)PK_ TAHNSEADLEESFNEHELEPS(0.248)S(0.752)PK T(-126.71)AHNS(-114.08)EADLEES(-72.36)FNEHELEPS(-4.81)S(4.81)PK 0 0 1 0 Q8IWS0 Q8IWS0 Q8IWS0 PHF6 PHD finger protein 6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 929.0632 3 926.390652 2776.15013 62880.3 0.63939 0.00059232 -0.15851 -0.00014684 0.48087 0.00044548 926.725075807714 929.396290226564 106.72 1.6787 106.72 106.34 108.02 -7.6294E-06 1045 130 11 0 0 0 2.6257E-56 4 62549 129.51 119.35 5 0.62425 0.77262 0 221360000 140350000 81013000 5952 1145 3071 3418 9693;9694;9695;9696 9696 2193;2194;2195 TAHNSEADLEESFNEHELEPSSPK 24 1 0 Phospho (STY) _TAHNSEADLEESFNEHELEPS(ph)SPK_ TAHNSEADLEES(0.002)FNEHELEPS(0.65)S(0.348)PK T(-83.41)AHNS(-83.5)EADLEES(-26.07)FNEHELEPS(2.72)S(-2.72)PK 0 0 1 0 Q8IWS0 Q8IWS0 Q8IWS0 PHF6 PHD finger protein 6 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 697.3 4 695.044808 2776.15013 71576.96 1.1769 0.00081802 -0.072146 -5.0144E-05 1.1048 0.00076788 695.295551554173 697.298957647031 90.467 1.5157 90.467 89.795 91.31 7.6294E-06 1241 144 12 0 0 0 2.4456E-20 1 58123 85.881 77.792 5 0.88492 0.59098 0 271790000 141870000 129920000 5953 1145 3071 3418 9697 9697 2193;2194;2195 TAITVEHLAIK 11 1 0 Unmodified _TAITVEHLAIK_ 0 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 598.3568 2 598.355888 1194.69722 NaN NaN NaN NaN NaN NaN NaN NaN NaN 106.74 1 106.74 106.24 107.24 0 0 0 0 0.0043324 1 62183 57.55 40.453 1 5954 1214 3072 3419 9698 9698 TAITVEHLAIK 11 1 0 Unmodified _TAITVEHLAIK_ 0 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 602.364 2 598.355888 1194.69722 NaN NaN NaN NaN NaN NaN NaN NaN NaN 106.76 1 106.76 106.26 107.26 -7.6294E-06 0 0 0 0.0050992 1 62193 55.064 34.543 1 5955 1214 3072 3419 9699 9699 TALINSTGEEVAMRK 15 1 1 Oxidation (M) _TALINSTGEEVAM(ox)RK_ TALINSTGEEVAM(1)RK TALINSTGEEVAM(41.97)RK 0 1 0 1 P02545;Q5TCI8;Q3BDU5;B4DFR3 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 551.9589 3 545.950533 1634.82977 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.761 1 78.761 78.261 79.261 0 0 0 0 0.0016841 1 41350 41.967 28.563 1 5956 954 3073 3420 9700 9700 261 TANSPGSGARPDPVR 15 0 2 Phospho (STY) _TANS(ph)PGSGARPDPVR_ TANS(0.993)PGS(0.007)GARPDPVR T(-38.67)ANS(21.61)PGS(-21.61)GARPDPVR 0 0 1 1 Q86VR6;B4DKX3;E9PIF2;Q59EC7;Q13206 Q86VR6 Q86VR6 DDX10 Probable ATP-dependent RNA helicase DDX10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 527.9147 3 521.242138 1560.70458 84197.97 0.54006 0.0002815 -0.1643 -8.564E-05 0.37576 0.00019586 521.242017320341 527.914222295672 47.271 0.99398 47.271 46.801 47.795 0 390 68 8 0 0 0 0.00039473 2 18327 61.477 56.399 3 0.51243 0.63617 0 52365000 33624000 18742000 5957 633 3074 3421 9701;9702 9702 1048 TAPPALPTGYDSEEEEESRPMSYDEK 26 1 1 Oxidation (M),Phospho (STY) _TAPPALPTGYDS(ph)EEEEESRPM(ox)SYDEK_ TAPPALPTGYDSEEEEESRPM(1)SYDEK TAPPALPT(0.119)GY(0.397)DS(0.482)EEEEES(0.001)RPMSYDEK TAPPALPTGYDSEEEEESRPM(75.95)SYDEK T(-53.95)APPALPT(-6.07)GY(-0.84)DS(0.84)EEEEES(-26.39)RPMS(-34.79)Y(-35.32)DEK 0 1 1 1 X5CF57;A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;A0A0G2JHN8;A0A140T9I1 X5CF57 X5CF57 BRD2 Bromodomain-containing protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1009.0853 3 1008.74952 3023.22672 60028.95 0.16643 0.00016788 0.090126 9.0915E-05 0.25655 0.0002588 1009.08399156915 1015.09143684001 85.397 1.3338 85.397 84.675 86.009 0 915 126 10 0 0 0 1.0869E-21 1 46210 75.945 69.718 7 0.55035 0.6607 0 150750000 89862000 60884000 5958 214 3075 3422 9703 9703 51 334 TAPVASTPSSTPIPALSPPTK 21 1 0 Phospho (STY) _TAPVASTPSSTPIPALS(ph)PPTK_ TAPVASTPSST(0.001)PIPALS(0.71)PPT(0.289)K T(-54.55)APVAS(-51.74)T(-47.98)PS(-32.95)S(-32.95)T(-30.65)PIPALS(3.91)PPT(-3.91)K 0 0 1 0 Q7Z3K3 Q7Z3K3 Q7Z3K3 POGZ Pogo transposable element with ZNF domain MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1054.5421 2 1050.53485 2099.05515 60262.16 0.47918 0.00050339 0.085572 8.9896E-05 0.56475 0.00059329 1051.03641486687 1054.54211118081 109.7 0.80872 109.7 109.29 110.1 0 393 59 9 0 0 0 2.3952E-12 1 64437 67.396 67.396 8 0.59961 0.74536 0 88201000 52838000 35364000 5959 1134 3076 3423 9704 9704 2169 TAQVPSPPR 9 0 1 Phospho (STY) _TAQVPS(ph)PPR_ TAQVPS(1)PPR T(-111.64)AQVPS(111.64)PPR 0 0 1 0 B4DQZ7;S4R3H4;E7EQT4;Q9UKV3;G3V3B0;Q69YJ6 B4DQZ7 B4DQZ7 ACIN1;DKFZp667N107 Apoptotic chromatin condensation inducer in the nucleus MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 521.7516 2 516.747331 1031.48011 84393.94 0.13117 6.7779E-05 0.17224 8.9005E-05 0.30341 0.00015678 516.747423779181 521.751456593154 53.803 1.8436 53.803 52.958 54.802 0 840 148 8 0 0 0 4.3074E-05 5 22650 115.57 101.42 2 1.1115 1.4047 0 165230000 74510000 90716000 5960 652 3077 3424 9705;9706;9707;9708;9709 9707 1083 TAQVPSPPR 9 0 1 Phospho (STY) _TAQVPS(ph)PPR_ TAQVPS(1)PPR T(-86.27)AQVPS(86.27)PPR 0 0 1 0 B4DQZ7;S4R3H4;E7EQT4;Q9UKV3;G3V3B0;Q69YJ6 B4DQZ7 B4DQZ7 ACIN1;DKFZp667N107 Apoptotic chromatin condensation inducer in the nucleus MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 516.7481 2 516.747331 1031.48011 83644.35 0.60511 0.00031269 0.0085463 4.4163E-06 0.61365 0.0003171 516.747298680081 521.751411736016 46.099 1.8841 46.099 45.266 47.15 0 861 175 6 0 0 0 3.9553E-05 5 27474 101.93 88.35 2 0.71989 0.4896 0 55793000 31728000 24065000 5961 652 3077 3424 9710;9711;9712;9713;9714 9712 1083 TASLELDLFPEAK 13 1 0 Phospho (STY) _TAS(ph)LELDLFPEAK_ T(0.002)AS(0.998)LELDLFPEAK T(-26.61)AS(26.61)LELDLFPEAK 0 0 1 0 H7C446 H7C446 H7C446 PPAN MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 757.3632 2 757.362922 1512.71129 69845.6 0.95272 0.00072155 0.36665 0.00027769 1.3194 0.00099924 757.36274580533 761.370016706253 129.63 0.5918 129.63 129.33 129.92 0 285 52 7 0 0 0 1.8088E-16 3 78683 124.3 101.81 2 0.72245 0.88196 0 18827000 11534000 7293100 5962 884 3078 3425 9715;9716;9717 9716 1495 TASPPALPK 9 1 0 Phospho (STY) _TAS(ph)PPALPK_ TAS(1)PPALPK T(-41.21)AS(41.21)PPALPK 0 0 1 0 B4DU02;Q59H82;A0A024QZ73;A0A024QZ72;Q13029;B4DEP3 B4DU02 B4DU02 PRDM2 PR domain zinc finger protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 481.2412 2 481.241351 960.468148 87960.77 0.76961 0.00037037 -0.33901 -0.00016315 0.4306 0.00020722 481.24106463509 485.248216496773 59.881 1.4963 59.881 59.063 60.559 0 537 141 6 0 0 0 0.0053539 4 36862 65.5 53.51 2 1.17 0.85634 0 20021000 9221400 10800000 5963 8 3079 3426 9718;9719;9720;9721 9719 10 TAVDGFQSESPEK 13 1 0 Phospho (STY) _TAVDGFQS(ph)ESPEK_ TAVDGFQS(0.587)ES(0.413)PEK T(-42)AVDGFQS(1.52)ES(-1.52)PEK 0 0 1 0 Q9Y232 Q9Y232 Q9Y232 CDYL Chromodomain Y-like protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 737.8097 2 737.808511 1473.60247 69760.19 0.64499 0.00047588 0.59721 0.00044063 1.2422 0.0009165 737.808768164311 741.815836362984 52.251 1.0645 52.251 51.731 52.795 -3.8147E-06 303 80 8 0 0 0 0.0089996 1 21778 41.996 33.681 3 1.1967 1.4193 0 8863100 3746500 5116600 5964 1245 3080 3427 9722 9722 2553;2554 TAVDGFQSESPEK 13 1 0 Phospho (STY) _TAVDGFQS(ph)ESPEK_ TAVDGFQS(0.5)ES(0.5)PEK T(-39.89)AVDGFQS(0)ES(0)PEK 0 0 1 0 Q9Y232 Q9Y232 Q9Y232 CDYL Chromodomain Y-like protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 741.8154 2 737.808511 1473.60247 72414.59 0.8254 0.00060899 -1.0288 -0.00075909 -0.20345 -0.00015011 737.80690558688 741.815455551919 57.677 0.59439 57.677 57.46 58.054 0 91 50 4 0 0 0 0.0061513 1 25362 45.864 45.864 3 1.1283 1.3385 0 9637200 4057200 5580100 5965 1245 3080 3427 9723 9723 2553;2554 TAVDGFQSESPEK 13 1 0 Phospho (STY) _TAVDGFQSES(ph)PEK_ TAVDGFQS(0.004)ES(0.996)PEK T(-200.71)AVDGFQS(-23.86)ES(23.86)PEK 0 0 1 0 Q9Y232 Q9Y232 Q9Y232 CDYL Chromodomain Y-like protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 741.8165 2 737.808511 1473.60247 70562.04 0.8636 0.00063717 0.017767 1.3109E-05 0.88137 0.00065028 737.808457402135 741.81559286894 59.02 1.8662 59.02 58.207 60.073 0 1029 146 9 0 0 0 3.7499E-151 5 26034 232.37 211.99 3 1.1449 1.4153 0 394360000 183040000 211320000 5966 1245 3080 3427 9724;9725;9726;9727;9728 9724 2553;2554 TAVDGFQSESPEK 13 1 0 Phospho (STY) _TAVDGFQSES(ph)PEK_ TAVDGFQS(0.009)ES(0.991)PEK T(-117.22)AVDGFQS(-20.22)ES(20.22)PEK 0 0 1 0 Q9Y232 Q9Y232 Q9Y232 CDYL Chromodomain Y-like protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 741.8161 2 737.808511 1473.60247 71484.56 1.1352 0.00083758 -0.025395 -1.8737E-05 1.1098 0.00081884 737.808490576781 741.815638476471 53.393 1.5834 53.393 52.699 54.282 -3.8147E-06 868 131 10 0 0 0 3.1584E-20 2 32706 133.48 116.04 3 1.4663 0.97618 0 96806000 39308000 57498000 5967 1245 3080 3427 9729;9730 9729 2553;2554 TAVVVGTITDDVR 13 0 1 Unmodified _TAVVVGTITDDVR_ 0 0 0 0 F8VUA6;Q0QEW2;G3V203;H0YHA7;A0A024QZD1;J3QQ67;Q07020;F8VYV2;B4DDY5;A0A075B7A0 F8VUA6 F8VUA6 RPL18 60S ribosomal protein L18 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 673.3713 2 673.369724 1344.72489 76137.67 1.0904 0.00073426 -0.20032 -0.00013489 0.8901 0.00059937 673.370000632964 678.372908067799 97.297 0.47189 97.297 96.977 97.448 0 96 41 4 0 0 0 3.8957E-25 2 54883 140.07 120.83 1 0.82681 1.0173 0 23977000 13474000 10503000 5968 13 3081 3428 9731;9732 9732 TAVVVGTITDDVR 13 0 1 Unmodified _TAVVVGTITDDVR_ 0 0 0 0 F8VUA6;Q0QEW2;G3V203;H0YHA7;A0A024QZD1;J3QQ67;Q07020;F8VYV2;B4DDY5;A0A075B7A0 F8VUA6 F8VUA6 RPL18 60S ribosomal protein L18 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 678.3749 2 673.369724 1344.72489 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.347 1 93.347 92.847 93.847 0 0 0 0 0.02466 1 60145 39.917 14.531 1 5969 13 3081 3428 9733 9733 TAYCDIHTPPGSAR 14 0 1 Phospho (STY) _TAYCDIHTPPGS(ph)AR_ TAYCDIHT(0.016)PPGS(0.984)AR T(-44.41)AY(-36.33)CDIHT(-17.91)PPGS(17.91)AR 0 0 1 0 P55201 P55201 P55201 BRPF1 Peregrin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 542.5643 3 542.564112 1624.67051 84100.83 0.57457 0.00031174 -0.20554 -0.00011152 0.36903 0.00020022 542.898275825121 545.89996805636 63.618 0.67308 63.618 63.379 64.052 3.8147E-06 169 51 5 0 0 0 0.0013145 1 29906 48.883 40.908 4 0.56738 0.6981 0 23899000 15083000 8816000 5970 1009 3082 3429 9734 9734 1841 TCSPESQQIYGDIK 14 1 0 Phospho (STY) _TCS(ph)PESQQIYGDIK_ TCS(1)PESQQIYGDIK T(-44.56)CS(38.52)PES(-38.52)QQIY(-110.34)GDIK 0 0 1 0 Q4VC44;B3KRZ0;I3L287;B3KPY2;B3KP60;J3KNW1 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 853.3616 2 853.360585 1704.70662 65665.63 0.69418 0.00059239 -0.0041923 -3.5775E-06 0.68999 0.00058881 853.360796074191 857.36777247454 77.821 1.5296 77.821 77.167 78.697 0 714 137 8 0 0 0 1.116E-33 3 40830 145.1 86.222 4 0.95921 1.1897 0 116880000 60395000 56489000 5971 1086 3083 3430 9735;9736;9737 9736 2049 TCSPESQQIYGDIK 14 1 0 Phospho (STY) _TCS(ph)PESQQIYGDIK_ T(0.059)CS(0.94)PES(0.001)QQIYGDIK T(-12.02)CS(12.02)PES(-31.1)QQIY(-72.08)GDIK 0 0 1 0 Q4VC44;B3KRZ0;I3L287;B3KPY2;B3KP60;J3KNW1 Q4VC44 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 853.864 2 853.360585 1704.70662 64987.01 1.1786 0.0010058 -0.038022 -3.2446E-05 1.1406 0.00097336 853.360937635675 857.869123312867 79.909 1.4302 79.909 79.245 80.675 0 713 136 8 0 0 0 8.6564E-07 1 50915 90.707 60.795 4 1.2934 0.8636 0 307860000 162960000 144900000 5972 1086 3083 3430 9738 9738 2049 TDASSASSFLDSDELER 17 0 1 Phospho (STY) _TDAS(ph)SASSFLDSDELER_ T(0.079)DAS(0.397)S(0.397)AS(0.108)S(0.019)FLDSDELER T(-7.02)DAS(0)S(0)AS(-5.66)S(-13.12)FLDS(-33.54)DELER 0 0 1 0 H0Y4X3;G3XAC6;B4DRA0;B4DLM0;B3KWX7;Q68DD9;B4E1M7;Q14498;A0A0U1RQW2;A0A0U1RQH7;B7Z4L7;Q6N037;Q6MZY7;E1P5S2 H0Y4X3 H0Y4X3 RBM39;DKFZp781C0423;DKFZp686A11192;DKFZp686C17209;RNPC2 RNA-binding protein 39 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 955.3898 2 955.388582 1908.76261 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.26 1 105.26 104.76 105.76 7.6294E-06 0 0 0 0.0035675 1 61038 41.401 26.199 6 5973 608 3084 3431 9739 9739 1006;1007 TDDEDFVPSDASPPK 15 1 0 Phospho (STY) _TDDEDFVPS(ph)DASPPK_ TDDEDFVPS(0.539)DAS(0.461)PPK T(-103.27)DDEDFVPS(0.68)DAS(-0.68)PPK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 850.3402 2 850.340372 1698.66619 66447.59 0.77137 0.00065593 -0.032754 -2.7852E-05 0.73862 0.00062808 850.340033644267 854.347300837613 80.257 1.2893 80.257 79.604 80.893 0 515 119 6 0 0 0 3.9253E-28 3 42532 135.81 122.01 3 0.922 1.1528 0 64560000 31371000 33189000 5974 962 3085 3432 9740;9741;9742 9741 1705;1706;2875 TDDEDFVPSDASPPK 15 1 0 Phospho (STY) _TDDEDFVPSDAS(ph)PPK_ TDDEDFVPS(0.003)DAS(0.997)PPK T(-141.4)DDEDFVPS(-25.27)DAS(25.27)PPK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 850.3414 2 850.340372 1698.66619 65398.5 0.67972 0.000578 0.01132 9.6259E-06 0.69104 0.00058762 850.340641070783 854.347344109326 82.344 3.2097 82.344 81.068 84.278 0 2548 300 13 0 0 0 2.1806E-62 10 43661 167.37 148.63 3 0.93919 1.1552 0 3895600000 1990400000 1905200000 5975 962 3085 3432 9743;9744;9745;9746;9747;9748;9749;9750;9751;9752 9746 1705;1706;2875 TDDEDFVPSDASPPK 15 1 0 Phospho (STY) _TDDEDFVPSDAS(ph)PPK_ TDDEDFVPS(0.427)DAS(0.573)PPK T(-105.45)DDEDFVPS(-1.28)DAS(1.28)PPK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 854.3473 2 850.340372 1698.66619 NaN NaN NaN -0.021327 -1.8136E-05 NaN NaN NaN NaN 84.569 0.70556 84.569 84.418 85.123 0 0 0 0 5.8277E-36 1 45448 125.73 101.88 3 NaN NaN 0 14928000 0 14928000 5976 962 3085 3432 9753 9753 1705;1706;2875 TDDEDFVPSDASPPK 15 1 0 Phospho (STY) _TDDEDFVPS(ph)DASPPK_ TDDEDFVPS(0.578)DAS(0.421)PPK T(-36.47)DDEDFVPS(1.38)DAS(-1.38)PPK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 850.3401 2 850.340372 1698.66619 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.566 1 79.566 79.066 80.066 0 0 0 0 0.0045162 1 41968 42.317 30.843 3 5977 962 3085 3432 9754 9754 1705;1706;2875 TDDEDFVPSDASPPK 15 1 0 Phospho (STY) _TDDEDFVPSDAS(ph)PPK_ TDDEDFVPS(0.327)DAS(0.673)PPK T(-47.14)DDEDFVPS(-3.14)DAS(3.14)PPK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 850.3414 2 850.340372 1698.66619 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.93 1 80.93 80.43 81.43 0 0 0 0 2.2502E-06 1 42962 66.215 55.11 3 5978 962 3085 3432 9755 9755 1705;1706;2875 TDDEDFVPSDASPPK 15 1 0 Phospho (STY) _TDDEDFVPSDAS(ph)PPK_ TDDEDFVPS(0.163)DAS(0.836)PPK T(-43.37)DDEDFVPS(-7.09)DAS(7.09)PPK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 854.3484 2 850.340372 1698.66619 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.865 1 85.865 85.365 86.365 7.6294E-06 0 0 0 0.00054673 1 46437 51.546 41.265 3 5979 962 3085 3432 9756 9756 1705;1706;2875 TDDEDFVPSDASPPK 15 1 0 Phospho (STY) _TDDEDFVPS(ph)DASPPK_ TDDEDFVPS(0.5)DAS(0.5)PPK T(-47.62)DDEDFVPS(0)DAS(0)PPK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 850.3395 2 850.340372 1698.66619 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.108 1 87.108 86.608 87.608 7.6294E-06 0 0 0 0.00015184 1 47304 55.401 42.445 3 5980 962 3085 3432 9757 9757 1705;1706;2875 TDDEDFVPSDASPPK 15 1 0 Phospho (STY) _TDDEDFVPS(ph)DASPPK_ TDDEDFVPS(0.5)DAS(0.5)PPK T(-34.18)DDEDFVPS(0)DAS(0)PPK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 850.3422 2 850.340372 1698.66619 64487.26 0.9232 0.00078504 0.063142 5.3692E-05 0.98635 0.00083873 850.339831026733 854.849494931629 84.456 0.82608 84.456 84.044 84.87 0 274 71 5 0 0 0 0.0032461 1 54097 40.154 33.913 3 1.517 1.1065 0 20209000 10019000 10190000 5981 962 3085 3432 9758 9758 1705;1706;2875 TDDEDFVPSDASPPK 15 1 0 Phospho (STY) _TDDEDFVPSDAS(ph)PPK_ TDDEDFVPS(0.404)DAS(0.596)PPK T(-86.05)DDEDFVPS(-1.69)DAS(1.69)PPK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 854.3483 2 850.340372 1698.66619 66044.13 1.0173 0.00086506 -0.30618 -0.00026036 0.71113 0.0006047 850.341045667279 854.347395479556 86.141 2.294 86.141 85.107 87.401 0 1953 214 13 0 0 0 2.4104E-12 4 55786 104.41 96.87 3 1.5654 1.0409 0 3764400000 1463200000 2301200000 5982 962 3085 3432 9759;9760;9761;9762 9761 1705;1706;2875 TDDEDFVPSDASPPK 15 1 0 Phospho (STY) _TDDEDFVPSDAS(ph)PPK_ TDDEDFVPS(0.302)DAS(0.698)PPK T(-51.74)DDEDFVPS(-3.64)DAS(3.64)PPK 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 850.3397 2 850.340372 1698.66619 66349.03 1.1128 0.00094629 -0.5114 -0.00043486 0.60144 0.00051143 850.339549261513 854.346916695964 87.569 2.3338 87.569 87.201 89.535 -7.6294E-06 691 225 6 0 0 0 0.0010224 2 56410 62.528 53.241 3 1.7184 1.1384 0 71162000 27944000 43218000 5983 962 3085 3432 9763;9764 9764 1705;1706;2875 TDDEDFVPSDASPPK 15 1 0 2 Phospho (STY) _TDDEDFVPS(ph)DAS(ph)PPK_ TDDEDFVPS(1)DAS(1)PPK T(-37.53)DDEDFVPS(37.53)DAS(39.61)PPK 0 0 2 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 894.3304 2 890.323538 1778.63252 67081.91 0.51482 0.00045836 0.0064703 5.7606E-06 0.52129 0.00046412 890.323614948303 894.330536134266 84.121 0.76931 84.121 83.661 84.43 0 263 70 5 0 0 0 0.0010362 1 45003 45.873 37.274 3 0.75086 0.94442 0 28942000 16929000 12014000 5984 962 3085 3433 9765 9765 1705;1706;2875 TDDEDFVPSDASPPK 15 1 0 2 Phospho (STY) _TDDEDFVPS(ph)DAS(ph)PPK_ TDDEDFVPS(1)DAS(1)PPK T(-72.1)DDEDFVPS(72.1)DAS(77.9)PPK 0 0 2 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 894.3289 2 890.323538 1778.63252 64732.38 0.82036 0.00073039 -0.16683 -0.00014853 0.65354 0.00058186 890.323346669375 894.330174059949 86.254 0.93819 86.254 85.345 86.284 0 399 90 7 0 0 0 5.2285E-09 2 46272 98.654 89.618 3 0.78924 0.98021 0 98769000 55279000 43490000 5985 962 3085 3433 9766;9767 9767 1705;1706;2875 TDDEDFVPSDASPPK 15 1 0 2 Phospho (STY) _TDDEDFVPS(ph)DAS(ph)PPK_ TDDEDFVPS(1)DAS(1)PPK T(-95.68)DDEDFVPS(95.68)DAS(106.18)PPK 0 0 2 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 894.3307 2 890.323538 1778.63252 64348.09 0.7792 0.00069374 -0.14497 -0.00012907 0.63423 0.00056467 890.32388087399 894.330350817679 87.039 3.1534 87.039 86.284 89.437 0 2181 289 12 0 0 0 1.028E-33 8 46818 138.81 128.18 3 0.71852 0.88282 0 6333100000 3647100000 2686000000 5986 962 3085 3433 9768;9769;9770;9771;9772;9773;9774;9775 9769 1705;1706;2875 TDDEDFVPSDASPPK 15 1 0 2 Phospho (STY) _TDDEDFVPS(ph)DAS(ph)PPK_ TDDEDFVPS(1)DAS(1)PPK T(-37.41)DDEDFVPS(37.97)DAS(37.41)PPK 0 0 2 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 890.3247 2 890.323538 1778.63252 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.638 1 89.638 89.138 90.138 -7.6294E-06 0 0 0 0.00023662 1 49164 54.09 42.558 3 5987 962 3085 3433 9776 9776 1705;1706;2875 TDDEDFVPSDASPPK 15 1 0 2 Phospho (STY) _TDDEDFVPS(ph)DAS(ph)PPK_ TDDEDFVPS(1)DAS(1)PPK T(-91.16)DDEDFVPS(91.16)DAS(99.95)PPK 0 0 2 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 890.3248 2 890.323538 1778.63252 64632.25 1.016 0.00090455 -0.31671 -0.00028198 0.69926 0.00062257 890.324136929903 894.330513498632 96.589 3.3242 96.589 95.279 98.604 0 2510 321 13 0 0 0 2.4646E-24 7 62036 127.66 119.28 3 1.4742 0.981 0 2391500000 928020000 1463500000 5988 962 3085 3433 9777;9778;9779;9780;9781;9782;9783 9778 1705;1706;2875 TDDEDFVPSDASPPK 15 1 0 3 Phospho (STY) _T(ph)DDEDFVPS(ph)DAS(ph)PPK_ T(1)DDEDFVPS(1)DAS(1)PPK T(56.96)DDEDFVPS(56.96)DAS(56.96)PPK 0 0 3 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 934.3139 2 930.306703 1858.59885 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.104 1 92.104 91.604 92.604 0 0 0 0 0.00026956 1 51047 56.959 44.982 1 5989 962 3085 3434 9784 9784 1705;1706;2875 TDGSISGDRQPVTVADYISR 20 0 2 Phospho (STY) _TDGS(ph)ISGDRQPVTVADYISR_ T(0.053)DGS(0.926)IS(0.014)GDRQPVT(0.006)VADYISR T(-12.41)DGS(12.41)IS(-18.05)GDRQPVT(-21.68)VADY(-43.08)IS(-39.66)R 0 0 1 1 P51116 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 746.6845 3 739.677628 2216.01106 72580.59 1.1707 0.00086595 -0.49364 -0.00036513 0.67708 0.00050082 739.677244351179 746.683855248703 99.447 0.54195 99.447 99.19 99.732 7.6294E-06 136 45 5 0 0 0 1.9224E-05 1 56705 45.957 41.605 6 1.6291 1.982 0 19353000 6307200 13046000 5990 1003 3086 3435 9785 9785 1827;1828 TDGSISGDRQPVTVADYISR 20 0 2 2 Phospho (STY) _TDGS(ph)IS(ph)GDRQPVTVADYISR_ T(0.097)DGS(0.913)IS(0.99)GDRQPVTVADYISR T(-10.15)DGS(10.15)IS(19.78)GDRQPVT(-35.18)VADY(-53.83)IS(-55.72)R 0 0 2 1 P51116 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 766.6685 3 766.333072 2295.97739 69497.76 0.8763 0.00067154 -0.14056 -0.00010772 0.73574 0.00056382 766.33274756495 773.005132650804 104.4 0.90071 104.4 103.99 104.89 0 349 64 8 0 0 0 1.0705E-08 1 60257 66.138 66.138 15 0.96359 1.1952 0 42184000 19997000 22187000 5991 1003 3086 3436 9786 9786 1827;1828 TDHPEIGEGKPTPALSEEASSSSIR 25 1 1 Unmodified _TDHPEIGEGKPTPALSEEASSSSIR_ 0 0 0 1 B4DS66;B4DKR1;Q16891;Q05DN3 B4DS66 B4DS66 IMMT MICOS complex subunit MIC60 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 649.8205 4 649.568777 2594.246 76558.91 1.7534 0.001139 0.1814 0.00011783 1.9349 0.0012568 649.819808866181 654.324997624284 100.67 0.39847 100.67 100.51 100.91 0 91 28 5 0 0 0 0.00012861 2 57698 33.835 26.803 1 0.70882 0.81621 0 25856000 15587000 10269000 5992 630 3087 3437 9787;9788 9787 TDLSTTVATPSSGLK 15 1 0 Phospho (STY) _TDLSTTVATPS(ph)SGLK_ TDLSTT(0.001)VAT(0.036)PS(0.481)S(0.481)GLK T(-51.7)DLS(-35.4)T(-35.25)T(-27.85)VAT(-11.27)PS(0)S(0)GLK 0 0 1 0 Q03164;B4E012 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 783.3817 2 779.374018 1556.73348 NaN NaN NaN 0.54002 0.00042087 NaN NaN NaN NaN 83.398 0.20328 83.398 83.27 83.473 -7.6294E-06 0 0 0 8.8416E-05 1 44685 59.673 28.179 7 NaN NaN 0 8164700 0 8164700 5993 1034 3088 3438 9789 9789 1905;1906 TDLSTTVATPSSGLK 15 1 0 Phospho (STY) _TDLSTTVATPS(ph)SGLK_ TDLSTTVAT(0.03)PS(0.485)S(0.485)GLK T(-67.34)DLS(-56.03)T(-45.38)T(-40.87)VAT(-12.03)PS(0)S(0)GLK 0 0 1 0 Q03164;B4E012 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 779.3738 2 779.374018 1556.73348 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.598 1 83.598 83.098 84.098 0 0 0 0 2.6049E-06 1 44887 75.316 57.88 7 5994 1034 3088 3438 9790 9790 1905;1906 TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHK 35 1 0 Unmodified _TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHK_ 0 0 0 0 B2R959;Q6NTA2;P14866 B2R959 B2R959 HNRNPL Heterogeneous nuclear ribonucleoprotein L MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 994.4086 3 994.405696 2980.19526 61168.43 0.59779 0.00059445 -0.18341 -0.00018238 0.41439 0.00041207 994.740045682756 997.411280667955 56.829 1.1475 56.829 56.516 57.664 3.8147E-06 661 95 10 0 0 0 0.00013853 2 24590 26.13 20.035 1 1.4765 1.8341 0 96792000 37891000 58901000 5995 544 3089 3439 9791;9792 9792 TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHK 35 1 0 Unmodified _TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHK_ 0 0 0 0 B2R959;Q6NTA2;P14866 B2R959 B2R959 HNRNPL Heterogeneous nuclear ribonucleoprotein L MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 746.3063 4 746.056091 2980.19526 68365.02 0.85455 0.00063754 -0.012513 -9.3353E-06 0.84204 0.00062821 746.306848408126 748.310592788819 56.837 1.7998 56.837 56.062 57.862 0 1033 127 12 0 0 0 1.6345E-05 2 25074 33.646 31.888 1 1.5321 1.8935 0 437490000 184770000 252720000 5996 544 3089 3439 9793;9794 9794 TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHK 35 1 0 Unmodified _TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHK_ 0 0 0 0 B2R959;Q6NTA2;P14866 B2R959 B2R959 HNRNPL Heterogeneous nuclear ribonucleoprotein L MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 745.9788 4 746.056091 2980.19526 69458.09 0.67343 0.00050242 0.081199 6.0579E-05 0.75463 0.000563 746.306466877615 748.310768120346 15.315 0.59876 15.315 15.078 15.676 9.5367E-07 55 19 8 0 0 0 1.1206E-51 1 2936 97.387 90.512 1 1.115 0.75274 0 26169000 13708000 12460000 5997 544 3089 3439 9795 9795 TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHK 35 1 0 Unmodified _TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHK_ 0 0 0 0 B2R959;Q6NTA2;P14866 B2R959 B2R959 HNRNPL Heterogeneous nuclear ribonucleoprotein L MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 994.7413 3 994.405696 2980.19526 60774.64 0.065658 6.5291E-05 0.72631 0.00072224 0.79196 0.00078753 994.740342935633 997.412234211221 15.315 0.42275 15.315 15.117 15.54 0 36 10 9 0 0 0 9.6074E-05 1 2972 28.869 23.662 1 0.83161 0.54429 0 49238000 26081000 23157000 5998 544 3089 3439 9796 9796 TDNSSLSSPLNPK 13 1 0 Phospho (STY) _TDNSSLSS(ph)PLNPK_ TDNSSLS(0.025)S(0.975)PLNPK T(-150.52)DNS(-81.03)S(-45.83)LS(-15.9)S(15.9)PLNPK 0 0 1 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 724.3323 2 720.324328 1438.6341 70433.07 0.70928 0.00051091 -0.047889 -3.4496E-05 0.66139 0.00047642 720.324187818169 724.331427934837 67.489 1.7124 67.489 66.687 68.399 0 760 141 8 0 0 0 1.5872E-94 5 33246 198.23 181 5 30.662 37.842 0 808170000 29665000 778510000 5999 1232 3090 3440 9797;9798;9799;9800;9801 9799 2516;2517 TDNSSLSSPLNPK 13 1 0 Phospho (STY) _TDNSSLS(ph)SPLNPK_ T(0.001)DNS(0.007)S(0.026)LS(0.604)S(0.362)PLNPK T(-29.29)DNS(-19.1)S(-13.67)LS(2.23)S(-2.23)PLNPK 0 0 1 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 724.3323 2 720.324328 1438.6341 NaN NaN NaN NaN NaN NaN NaN NaN NaN 69.822 1 69.822 69.322 70.322 0 0 0 0 0.0088849 1 34810 42.243 34.199 5 6000 1232 3090 3440 9802 9802 2516;2517 TDNSSLSSPLNPK 13 1 0 Phospho (STY) _TDNSSLSS(ph)PLNPK_ TDNSS(0.017)LS(0.058)S(0.925)PLNPK T(-81.16)DNS(-43.56)S(-17.48)LS(-12.03)S(12.03)PLNPK 0 0 1 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 724.3331 2 720.324328 1438.6341 71627.88 0.96889 0.00069791 0.26808 0.0001931 1.237 0.00089102 720.325241450299 724.331987682214 63.781 3.6375 63.781 62.399 66.037 -3.8147E-06 1661 331 10 0 0 0 3.6632E-14 7 39437 112.02 103.44 5 39.309 26.18 0 1451300000 39660000 1411700000 6001 1232 3090 3440 9803;9804;9805;9806;9807;9808;9809 9805 2516;2517 TDNSSLSSPLNPK 13 1 0 Phospho (STY) _TDNSSLS(ph)SPLNPK_ TDNSSLS(0.5)S(0.5)PLNPK T(-93.21)DNS(-75.7)S(-49.89)LS(0)S(0)PLNPK 0 0 1 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 724.3325 2 720.324328 1438.6341 NaN NaN NaN 0.50052 0.00036054 NaN NaN NaN NaN 46.795 1.634 46.795 45.933 47.567 0 0 0 0 2.1294E-16 1 28053 111.31 96.639 5 NaN NaN 0 12370000 0 12370000 6002 1232 3090 3440 9810 9810 2516;2517 TDNSSLSSPLNPK 13 1 0 Phospho (STY) _TDNSSLSS(ph)PLNPK_ TDNSS(0.001)LS(0.114)S(0.885)PLNPK T(-79.01)DNS(-43.15)S(-29.57)LS(-8.88)S(8.88)PLNPK 0 0 1 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 724.3324 2 720.324328 1438.6341 NaN NaN NaN 0.2608 0.00018786 NaN NaN NaN NaN 66.539 1.6441 66.539 65.97 67.614 0 0 0 0 5.3945E-16 1 41376 106.33 84.871 5 NaN NaN 0 18592000 0 18592000 6003 1232 3090 3440 9811 9811 2516;2517 TDQADGPREPPQSAR 15 0 2 Unmodified _TDQADGPREPPQSAR_ 0 0 0 1 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 542.261 3 542.260647 1623.76011 81555.19 0.36264 0.00019664 0.10172 5.5159E-05 0.46436 0.0002518 542.260708650309 548.932898173168 50.726 1.3567 50.726 50.083 51.439 0 635 112 8 0 0 0 4.6179E-12 3 20674 105.14 84.282 1 1.019 1.2639 0 41313000 19447000 21866000 6004 1212 3091 3441 9812;9813;9814 9813 TDQADGPREPPQSAR 15 0 2 Unmodified _TDQADGPREPPQSAR_ 0 0 0 1 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 548.9333 3 542.260647 1623.76011 80686.65 0.79557 0.0004314 -0.4025 -0.00021826 0.39306 0.00021314 542.260610553613 548.932399144902 16.517 0.55524 16.517 16.301 16.856 0 68 19 6 0 0 0 0.0093131 1 3887 37.77 15.714 1 2.3257 2.1677 0 3565000 950500 2614500 6005 1212 3091 3441 9815 9815 TDSQSVRHSPIAPSSPSPQVLAQK 24 1 1 3 Phospho (STY) _TDSQSVRHS(ph)PIAPSS(ph)PS(ph)PQVLAQK_ T(0.197)DS(0.225)QS(0.266)VRHS(0.314)PIAPS(0.196)S(0.822)PS(0.981)PQVLAQK T(-2.23)DS(-1.5)QS(-0.76)VRHS(0.76)PIAPS(-6.76)S(6.76)PS(17.23)PQVLAQK 0 0 3 1 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 926.0812 3 919.739711 2756.19731 62838.21 0.48686 0.00044778 0.28331 0.00026057 0.77017 0.00070835 920.074395030475 926.081569712659 77.805 1.7447 77.805 77.032 78.776 0 1501 157 14 0 0 0 9.1415E-11 4 40215 60.728 60.728 35 0.80627 0.99602 0 1360900000 747690000 613180000 6006 1212 3092 3442 9816;9817;9818;9819 9816 2422;2423;2424;2425;2432 TDSQSVRHSPIAPSSPSPQVLAQK 24 1 1 3 Phospho (STY) _TDS(ph)QSVRHSPIAPS(ph)SPS(ph)PQVLAQK_ T(0.078)DS(0.336)QS(0.316)VRHS(0.316)PIAPS(0.518)S(0.456)PS(0.981)PQVLAQK T(-6.85)DS(0.3)QS(-0.3)VRHS(-0.3)PIAPS(0.59)S(-0.59)PS(17.29)PQVLAQK 0 0 3 1 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 690.0573 4 690.056603 2756.19731 NaN NaN NaN -0.39322 -0.00027135 NaN NaN NaN NaN 77.834 1.3477 77.834 76.843 78.191 0 0 0 0 4.5931E-05 1 40625 44.615 33.626 35 NaN NaN 0 42805000 42805000 0 6007 1212 3092 3442 9820 9820 2422;2423;2424;2425;2432 TDSQSVRHSPIAPSSPSPQVLAQK 24 1 1 2 Phospho (STY) _TDSQSVRHS(ph)PIAPSS(ph)PSPQVLAQK_ T(0.029)DS(0.178)QS(0.213)VRHS(0.579)PIAPS(0.203)S(0.788)PS(0.009)PQVLAQK T(-12.85)DS(-4.94)QS(-4.15)VRHS(4.15)PIAPS(-5.54)S(5.54)PS(-19.15)PQVLAQK 0 0 2 1 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 893.4192 3 893.084268 2676.23097 63620.09 0.8235 0.00073546 -0.22342 -0.00019953 0.60008 0.00053592 893.41842585986 899.425867293937 79.414 1.8072 79.414 78.605 80.412 0 1493 164 12 0 0 0 3.0746E-14 3 41895 70.632 70.632 21 1.0918 1.3385 0 758520000 375360000 383160000 6008 1212 3092 3443 9821;9822;9823 9821 2422;2423;2424;2425;2432 TDSQSVRHSPIAPSSPSPQVLAQK 24 1 1 2 Phospho (STY) _TDSQSVRHS(ph)PIAPS(ph)SPSPQVLAQK_ T(0.17)DS(0.29)QS(0.306)VRHS(0.368)PIAPS(0.62)S(0.189)PS(0.057)PQVLAQK T(-3.53)DS(-1.7)QS(-1.37)VRHS(1.37)PIAPS(5.45)S(-5.45)PS(-10.92)PQVLAQK 0 0 2 1 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 670.3175 4 670.06502 2676.23097 72739.28 1.0098 0.00067666 -0.10083 -6.7564E-05 0.90901 0.0006091 670.316046733384 674.821234946577 74.105 1.9368 74.105 73.453 75.39 0 1359 168 14 0 0 0 4.0297E-06 1 46802 41.83 34.47 21 1.8389 1.4238 0 567040000 195550000 371490000 6009 1212 3092 3443 9824 9824 2422;2423;2424;2425;2432 TDSQSVRHSPIAPSSPSPQVLAQK 24 1 1 Phospho (STY) _TDSQSVRHS(ph)PIAPSSPSPQVLAQK_ T(0.017)DS(0.212)QS(0.212)VRHS(0.55)PIAPS(0.006)S(0.002)PS(0.001)PQVLAQK T(-15.13)DS(-4.15)QS(-4.15)VRHS(4.15)PIAPS(-19.84)S(-23.52)PS(-27.08)PQVLAQK 0 0 1 1 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 872.7711 3 866.428825 2596.26464 65547.88 0.63274 0.00054823 -0.27281 -0.00023637 0.35993 0.00031185 866.76287472975 872.770542541164 85.18 1.4017 85.18 84.507 85.908 0 722 132 8 0 0 0 3.7888E-10 1 46119 57.046 57.046 7 1.2921 1.539 0 82637000 34009000 48628000 6010 1212 3092 3444 9825 9825 2422;2423;2424;2425;2432 TDSQSVRHSPIAPSSPSPQVLAQK 24 1 1 Phospho (STY) _TDSQSVRHS(ph)PIAPSSPSPQVLAQK_ TDS(0.003)QS(0.013)VRHS(0.984)PIAPSSPSPQVLAQK T(-37.83)DS(-25.01)QS(-18.85)VRHS(18.85)PIAPS(-44.62)S(-56.95)PS(-81.6)PQVLAQK 0 0 1 1 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 866.7641 3 866.428825 2596.26464 65041.03 1.0165 0.00088071 0.1329 0.00011515 1.1494 0.00099586 866.763412648853 872.770687422217 70.243 1.8848 70.243 69.475 71.359 0 1517 164 12 0 0 0 2.4098E-68 2 44399 140.55 140.55 7 2.0925 1.6189 0 365150000 120970000 244170000 6011 1212 3092 3444 9826;9827 9826 2422;2423;2424;2425;2432 TDSREDEISPPPPNPVVK 18 1 1 Phospho (STY) _TDSREDEIS(ph)PPPPNPVVK_ T(0.005)DS(0.071)REDEIS(0.924)PPPPNPVVK T(-22.76)DS(-11.16)REDEIS(11.16)PPPPNPVVK 0 0 1 1 K7EMU2;K7EMZ6;A6YCE1;K7EIE5;K7EID3;K7EJ40;K7EK41;K7EPB2;Q68DQ4;B2R5T5;Q15300;P10644 K7EMU2 K7EMU2 PRKAR1A;PRKAR1A/RARA fusion;DKFZp779L0468;RET/PTC2 cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 686.6594 3 686.324415 2055.95142 73445.8 0.73168 0.00050217 0.094724 6.5011E-05 0.82641 0.00056718 686.324547262795 692.666280355957 82.207 1.0907 82.207 81.682 82.773 7.6294E-06 257 102 5 0 0 0 2.0021E-05 2 43721 51.526 41.469 3 1.31 1.5503 0 50256000 21046000 29211000 6012 431 3093 3445 9828;9829 9829 749 TDSREDEISPPPPNPVVK 18 1 1 Phospho (STY) _TDSREDEIS(ph)PPPPNPVVK_ T(0.019)DS(0.079)REDEIS(0.902)PPPPNPVVK T(-16.85)DS(-10.55)REDEIS(10.55)PPPPNPVVK 0 0 1 1 K7EMU2;K7EMZ6;A6YCE1;K7EIE5;K7EID3;K7EJ40;K7EK41;K7EPB2;Q68DQ4;B2R5T5;Q15300;P10644 K7EMU2 K7EMU2 PRKAR1A;PRKAR1A/RARA fusion;DKFZp779L0468;RET/PTC2 cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 692.3324 3 686.324415 2055.95142 NaN NaN NaN 0.15882 0.000109 NaN NaN NaN NaN 81.972 0.71531 81.972 81.46 82.175 -7.6294E-06 0 0 0 2.1801E-05 1 43864 50.202 39.735 3 NaN NaN 0 20913000 0 20913000 6013 431 3093 3445 9830 9830 749 TDSVIIADQTPTPTR 15 0 1 2 Phospho (STY) _TDSVIIADQT(ph)PT(ph)PTR_ TDSVIIADQT(0.997)PT(0.92)PT(0.083)R T(-99.36)DS(-91.55)VIIADQT(24.71)PT(10.57)PT(-10.57)R 0 0 2 0 B2R8U0;P17544;K7ESA4;K7ELQ4 B2R8U0 B2R8U0 ATF7 Cyclic AMP-dependent transcription factor ATF-7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 888.3889 2 887.886639 1773.75873 65894.84 0.46288 0.00041098 0.061042 5.4199E-05 0.52392 0.00046518 887.886778226406 892.88960775224 83.672 0.8524 83.672 83.239 84.091 0 242 81 5 0 0 0 3.8051E-28 2 44801 131.24 111.03 10 0.28737 0.35367 0 31495000 22072000 9422900 6014 543 3094 3446 9831;9832 9831 2758;2759 TDTLEDLFPTTK 12 1 0 Unmodified _TDTLEDLFPTTK_ 0 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 691.3496 2 690.84829 1379.68203 NaN NaN NaN -0.40203 -0.00027774 NaN NaN NaN NaN 116.55 0.6015 116.55 116.31 116.92 0 0 0 0 0.0032799 1 69584 70.942 41.198 1 NaN NaN 0 6407000 6407000 0 6015 963 3095 3447 9833 9833 TDTLEDLFPTTK 12 1 0 Unmodified _TDTLEDLFPTTK_ 0 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 694.8564 2 690.84829 1379.68203 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.54 1 116.54 116.04 117.04 0 0 0 0 0.00012739 1 69683 70.1 42.087 1 6016 963 3095 3447 9834 9834 TDTLEDLFPTTK 12 1 0 Unmodified _TDTLEDLFPTTK_ 0 0 0 0 P13010;Q53T09 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 690.8495 2 690.84829 1379.68203 NaN NaN NaN 0.65118 0.00044986 NaN NaN NaN NaN 118.47 0.53918 118.47 118.19 118.73 0 0 0 0 0.031921 1 76359 38.714 19.471 1 NaN NaN 0 2747600 2747600 0 6017 963 3095 3447 9835 9835 TEAEQQITEVFVLAER 16 0 1 Unmodified _TEAEQQITEVFVLAER_ 0 0 0 0 P46013;B4DRH3 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 937.4853 2 931.978355 1861.94216 64093.85 0.84562 0.0007881 0.29459 0.00027455 1.1402 0.0010626 931.978964684754 937.484175848779 129.67 2.5051 129.67 128.53 131.04 0 664 225 5 0 0 0 4.4967E-36 4 79004 132.59 132.59 1 1.5878 1.8644 0 13610000 6254900 7355600 6018 994 3096 3448 9836;9837;9838;9839 9837 TEAEQQITEVFVLAER 16 0 1 Unmodified _TEAEQQITEVFVLAER_ 0 0 0 0 P46013;B4DRH3 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 936.982 2 931.978355 1861.94216 NaN NaN NaN -0.024669 -2.2991E-05 NaN NaN NaN NaN 128.42 0.31902 128.42 128.26 128.58 0 0 0 0 2.8997E-06 1 77937 62.088 49.705 1 NaN NaN 0 3303400 0 3303400 6019 994 3096 3448 9840 9840 TEAEQQITEVFVLAER 16 0 1 Unmodified _TEAEQQITEVFVLAER_ 0 0 0 0 P46013;B4DRH3 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 932.4802 2 931.978355 1861.94216 NaN NaN NaN 0.28131 0.00026218 NaN NaN NaN NaN 128.92 0.36549 128.92 128.62 128.98 0 0 0 0 1.1923E-21 1 78270 109.84 94.089 1 NaN NaN 0 4014600 4014600 0 6020 994 3096 3448 9841 9841 TEAEQQITEVFVLAER 16 0 1 Unmodified _TEAEQQITEVFVLAER_ 0 0 0 0 P46013;B4DRH3 P46013 P46013 MKI67 Antigen KI-67 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 931.9787 2 931.978355 1861.94216 NaN NaN NaN NaN NaN NaN NaN NaN NaN 130.7 1 130.7 130.2 131.2 0 0 0 0 2.2828E-05 1 79501 91.858 70.628 1 6021 994 3096 3448 9842 9842 TEAEQQITEVFVLAER 16 0 1 Unmodified _TEAEQQITEVFVLAER_ 0 0 0 0 P46013;B4DRH3 P46013 P46013 MKI67 Antigen KI-67 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 931.9796 2 931.978355 1861.94216 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.02 1 131.02 130.52 131.52 0 0 0 0 3.6019E-08 1 79702 111.39 83.061 1 6022 994 3096 3448 9843 9843 TEAEQQITEVFVLAER 16 0 1 Unmodified _TEAEQQITEVFVLAER_ 0 0 0 0 P46013;B4DRH3 P46013 P46013 MKI67 Antigen KI-67 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 936.9858 2 931.978355 1861.94216 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.76 1 131.76 131.26 132.26 0 0 0 0 6.2204E-07 1 80155 72.089 58.183 1 6023 994 3096 3448 9844 9844 TEAEQQITEVFVLAER 16 0 1 Unmodified _TEAEQQITEVFVLAER_ 0 0 0 0 P46013;B4DRH3 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 936.9825 2 931.978355 1861.94216 64508.34 0.87638 0.00081676 0.56155 0.00052335 1.4379 0.0013401 931.978674812469 936.982899406622 132.28 0.50258 132.28 132.11 132.61 1.5259E-05 231 49 8 0 0 0 0.00041479 1 85289 56.599 56.599 1 3.0039 2.2679 0 19916000 4597900 15319000 6024 994 3096 3448 9845 9845 TEAFTSPEALQPGGTALAPK 20 1 0 Phospho (STY) _TEAFTS(ph)PEALQPGGTALAPK_ TEAFT(0.067)S(0.933)PEALQPGGTALAPK T(-58.09)EAFT(-11.45)S(11.45)PEALQPGGT(-71.51)ALAPK 0 0 1 0 Q7Z5J4 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1033.4972 2 1033.49573 2064.9769 60266.26 0.71649 0.00074049 0.36819 0.00038052 1.0847 0.001121 1033.99724321842 1038.00473098073 107.81 1.123 107.81 107.31 108.43 0 534 85 11 0 0 0 6.294E-29 2 62929 116.51 109.62 4 0.67862 0.83998 0 214850000 125110000 89742000 6025 1137 3097 3449 9846;9847 9846 2180 TEDGGEFEEGASENNAK 17 1 0 Phospho (STY) _TEDGGEFEEGAS(ph)ENNAK_ TEDGGEFEEGAS(1)ENNAK T(-64.45)EDGGEFEEGAS(64.45)ENNAK 0 0 1 0 O43719;B4DRS4 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 932.3499 2 932.349457 1862.68436 63600.38 0.74948 0.00069877 0.13287 0.00012388 0.88235 0.00082266 932.349569976874 936.356716072725 44.023 0.89769 44.023 43.616 44.513 0 373 66 8 0 0 0 8.5512E-06 2 16198 71.344 59.198 2 1.2858 1.5249 0 8643800 3797400 4846500 6026 927 3098 3450 9848;9849 9849 1567 TEELIESPKLESSEGEIIQTVDR 23 1 1 Phospho (STY) _TEELIES(ph)PKLESSEGEIIQTVDR_ TEELIES(0.949)PKLES(0.026)S(0.026)EGEIIQTVDR T(-42.74)EELIES(15.7)PKLES(-15.7)S(-15.7)EGEIIQT(-62.59)VDR 0 0 1 1 Q05BS8;A0A0A0MTP7;B4DZM2;B2RA91;F8VXG7;Q99590 Q05BS8 Q05BS8 SFRS2IP;SCAF11 Protein SCAF11 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 895.0981 3 894.763427 2681.26845 65437.43 0.91828 0.00082164 0.52395 0.00046881 1.4422 0.0012905 895.097943820299 900.77201216713 116.64 0.71761 116.64 116.3 117.02 0 317 63 7 0 0 0 8.4978E-20 1 69720 89.039 81.5 5 0.74498 0.88126 0 48523000 26361000 22161000 6027 300 3099 3451 9850 9850 478 TEIMSPLYQDEAPK 14 1 0 Oxidation (M),Phospho (STY) _TEIM(ox)S(ph)PLYQDEAPK_ TEIM(1)SPLYQDEAPK TEIMS(1)PLYQDEAPK TEIM(204.82)SPLYQDEAPK T(-75.44)EIMS(73)PLY(-73)QDEAPK 0 1 1 0 B4DKU3;Q8IY81 B4DKU3 B4DKU3 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 863.3812 2 859.373161 1716.73177 65198.51 0.7482 0.00064299 -0.24935 -0.00021428 0.49885 0.0004287 859.37319099538 863.380231951129 77.063 1.9775 77.063 76.543 78.52 0 1153 174 8 0 0 0 1.2901E-120 4 40311 204.82 181.4 3 1.0067 1.2451 0 313970000 146130000 167840000 6028 632 3100 3452 9851;9852;9853;9854 9853 161 1046 TEIMSPLYQDEAPK 14 1 0 Oxidation (M),Phospho (STY) _TEIM(ox)S(ph)PLYQDEAPK_ TEIM(1)SPLYQDEAPK TEIMS(0.999)PLY(0.001)QDEAPK TEIM(75.76)SPLYQDEAPK T(-43.94)EIMS(29.41)PLY(-29.41)QDEAPK 0 1 1 0 B4DKU3;Q8IY81 B4DKU3 B4DKU3 FTSJ3 pre-rRNA processing protein FTSJ3 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 863.3805 2 859.373161 1716.73177 NaN NaN NaN -0.81721 -0.00070229 NaN NaN NaN NaN 80.032 2.0353 80.032 79.63 81.665 0 0 0 0 0.00012638 1 51071 75.764 60.973 3 NaN NaN 0 106860000 0 106860000 6029 632 3100 3452 9855 9855 161 1046 TEIMSPLYQDEAPK 14 1 0 Phospho (STY) _TEIMS(ph)PLYQDEAPK_ T(0.003)EIMS(0.992)PLY(0.005)QDEAPK T(-24.88)EIMS(23.32)PLY(-23.32)QDEAPK 0 0 1 0 B4DKU3;Q8IY81 B4DKU3 B4DKU3 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 855.8868 2 851.375704 1700.73685 65794.28 1.2448 0.0010598 -0.43825 -0.00037312 0.80655 0.00068668 851.375292909579 855.382845850309 108.25 1.0389 108.25 107.73 108.77 -7.6294E-06 537 101 8 0 0 0 0.0040834 1 69470 42.958 37.234 3 1.4263 0.92998 0 32579000 13199000 19381000 6030 632 3100 3453 9856 9856 1046 TEKPPPEPGKPK 12 3 0 Unmodified _TEKPPPEPGKPK_ 0 0 0 2 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 435.5784 3 435.578477 1303.7136 90964.89 -0.10139 -4.4164E-05 0.020556 8.9536E-06 -0.080836 -3.521E-05 435.578448418046 443.592650029028 65.952 0.62943 65.952 65.652 66.281 0 266 48 8 0 0 0 0.00097323 2 31881 70.622 63.939 1 0.82814 1.0489 0 138360000 81419000 56941000 6031 953 3101 3454 9857;9858 9858 TELNSSAESEQPLDK 15 1 0 Phospho (STY) _TELNSS(ph)AESEQPLDK_ TELNS(0.172)S(0.82)AES(0.008)EQPLDK T(-37.13)ELNS(-6.79)S(6.79)AES(-20.04)EQPLDK 0 0 1 0 Q5XGA1;Q8N6E6;Q9Y5B6 Q5XGA1 Q5XGA1 C21orf66;PAXBP1 PAX3- and PAX7-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 864.3721 2 864.372204 1726.72985 67369.47 0.66978 0.00057894 -0.48665 -0.00042065 0.18312 0.00015829 864.371847554497 868.377999850779 58.578 0.73805 58.578 58.229 58.967 0 199 59 6 0 0 0 5.6929E-05 3 25950 75.764 75.764 4 0.85245 1.0114 0 10845000 6770700 4074800 6032 1115 3102 3455 9859;9860;9861 9861 2111;2112 TELNSSAESEQPLDK 15 1 0 2 Phospho (STY) _TELNS(ph)S(ph)AESEQPLDK_ T(0.08)ELNS(0.946)S(0.946)AES(0.028)EQPLDK T(-13.52)ELNS(13.52)S(13.52)AES(-18.24)EQPLDK 0 0 2 0 Q5XGA1;Q8N6E6;Q9Y5B6 Q5XGA1 Q5XGA1 C21orf66;PAXBP1 PAX3- and PAX7-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 908.3617 2 904.355369 1806.69619 65821.22 0.71893 0.00065016 0.17745 0.00016047 0.89637 0.00081064 904.355061221492 908.361967780003 61.984 0.69145 61.984 61.645 62.336 -3.8147E-06 170 46 5 0 0 0 0.0011326 1 28670 44.252 37.194 6 0.83214 1.0202 0 20856000 11140000 9715600 6033 1115 3102 3456 9862 9862 2111;2112 TENNDHINLK 10 1 0 Unmodified _TENNDHINLK_ 0 0 0 0 A0A024R8S3;P61956 A0A024R8S3 A0A024R8S3 SUMO2 Small ubiquitin-related modifier;Small ubiquitin-related modifier 2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 599.2974 2 599.296559 1196.57856 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.482 1 70.482 69.982 70.982 0 0 0 0 0.0070756 1 35238 57.859 31.965 1 6034 155 3103 3457 9863 9863 TEPACVSPIQNSAPVSDLTK 20 1 0 Phospho (STY) _TEPACVS(ph)PIQNSAPVSDLTK_ T(0.047)EPACVS(0.872)PIQNS(0.078)APVS(0.002)DLT(0.001)K T(-12.66)EPACVS(10.46)PIQNS(-10.46)APVS(-26.15)DLT(-31.57)K 0 0 1 0 D3DRJ1;B4DR27;B1APH0;Q6ZN30;B4E3J2;F5H586;Q5H9S4;H0Y6W5 D3DRJ1 D3DRJ1 hCG_27250;BNC2;DKFZp686A01127 Zinc finger protein basonuclin-2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1101.5187 2 1097.50851 2193.00246 NaN NaN NaN 0.092863 0.00010192 NaN NaN NaN NaN 101.28 0.63618 101.28 100.89 101.53 0 0 0 0 0.0011546 1 58079 40.941 27.823 5 NaN NaN 0 10272000 0 10272000 6035 520 3104 3458 9864 9864 888 TEPACVSPIQNSAPVSDLTK 20 1 0 Phospho (STY) _TEPACVS(ph)PIQNSAPVSDLTK_ T(0.008)EPACVS(0.991)PIQNS(0.001)APVSDLTK T(-20.98)EPACVS(20.98)PIQNS(-29.73)APVS(-41.71)DLT(-41.07)K 0 0 1 0 D3DRJ1;B4DR27;B1APH0;Q6ZN30;B4E3J2;F5H586;Q5H9S4;H0Y6W5 D3DRJ1 D3DRJ1 hCG_27250;BNC2;DKFZp686A01127 Zinc finger protein basonuclin-2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1102.0193 2 1097.50851 2193.00246 58360.41 0.85433 0.00093764 0.27254 0.00029911 1.1269 0.0012367 1098.01027667587 1101.51594258718 108.33 0.76855 108.33 107.95 108.72 7.6294E-06 488 76 9 0 0 0 4.9402E-07 1 69561 56.327 43.127 5 3.2545 2.1554 0 69912000 14283000 55628000 6036 520 3104 3458 9865 9865 888 TEPSSPLSDPSDIIR 15 0 1 Phospho (STY) _TEPSS(ph)PLSDPSDIIR_ TEPS(0.107)S(0.89)PLS(0.003)DPSDIIR T(-54.91)EPS(-9.21)S(9.21)PLS(-24.97)DPS(-39.93)DIIR 0 0 1 0 B4DTN6;Q9ULJ3;Q5H9S0 B4DTN6 B4DTN6 ZBTB21;DKFZp781N1974 Zinc finger and BTB domain-containing protein 21 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 852.8929 2 847.387657 1692.76076 64764.55 0.93456 0.00079194 0.1186 0.0001005 1.0532 0.00089244 847.387704584493 852.392326094756 104.99 1.369 104.99 104.47 105.84 -7.6294E-06 470 93 8 0 0 0 2.5043E-08 2 60680 92.935 75.733 5 0.51738 0.65179 0 55967000 33694000 22273000 6037 661 3105 3459 9866;9867 9867 1105;1106 TEPSSPLSDPSDIIR 15 0 1 Phospho (STY) _TEPSS(ph)PLSDPSDIIR_ TEPS(0.238)S(0.759)PLS(0.003)DPSDIIR T(-40.85)EPS(-5.03)S(5.03)PLS(-23.92)DPS(-36.5)DIIR 0 0 1 0 B4DTN6;Q9ULJ3;Q5H9S0 B4DTN6 B4DTN6 ZBTB21;DKFZp781N1974 Zinc finger and BTB domain-containing protein 21 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 852.894 2 847.387657 1692.76076 65601.18 1.2268 0.0010396 -0.11135 -9.4359E-05 1.1155 0.00094525 847.387637725056 852.391702055819 111.32 1.0749 111.32 110.86 111.93 0 673 104 8 0 0 0 3.1134E-05 3 71426 78.814 53.597 5 1.0595 0.71041 0 113260000 57068000 56188000 6038 661 3105 3459 9868;9869;9870 9869 1105;1106 TEPSSPLSDPSDIIR 15 0 1 2 Phospho (STY) _TEPSS(ph)PLS(ph)DPSDIIR_ T(0.01)EPS(0.177)S(0.816)PLS(0.864)DPS(0.132)DIIR T(-19.5)EPS(-6.61)S(6.61)PLS(8.03)DPS(-8.03)DIIR 0 0 2 0 B4DTN6;Q9ULJ3;Q5H9S0 B4DTN6 B4DTN6 ZBTB21;DKFZp781N1974 Zinc finger and BTB domain-containing protein 21 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 887.3718 2 887.370822 1772.72709 65807.48 0.78175 0.0006937 0.099236 8.8059E-05 0.88098 0.00078176 887.370911772239 892.37491415867 110.94 0.7285 110.94 110.56 111.29 -7.6294E-06 328 62 7 0 0 0 0.0012795 1 65333 43.791 36.528 10 0.72595 0.91346 0 47464000 25995000 21469000 6039 661 3105 3460 9871 9871 1105;1106 TEPSSPLSDPSDIIR 15 0 1 2 Phospho (STY) _TEPSS(ph)PLS(ph)DPSDIIR_ T(0.013)EPS(0.186)S(0.802)PLS(0.95)DPS(0.05)DIIR T(-18.26)EPS(-6.4)S(6.4)PLS(13.02)DPS(-13.02)DIIR 0 0 2 0 B4DTN6;Q9ULJ3;Q5H9S0 B4DTN6 B4DTN6 ZBTB21;DKFZp781N1974 Zinc finger and BTB domain-containing protein 21 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 887.3719 2 887.370822 1772.72709 64978.19 1.1884 0.0010546 0.005223 4.6347E-06 1.1936 0.0010592 887.370648881486 892.375128605569 120.82 1.0323 120.82 120.24 121.27 0 512 93 9 0 0 0 0.0010139 1 78172 46.892 35.621 10 0.98085 0.67184 0 48807000 23869000 24938000 6040 661 3105 3460 9872 9872 1105;1106 TEQFYR 6 0 1 Unmodified _TEQFYR_ 0 0 0 0 Q32Q62;J3QSV6;A0PJ61;O76021;I3L234;I3L3C4;I3L3U9;A0PJ87 Q32Q62 Q32Q62 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 427.2074 2 422.20341 842.392267 91721.06 0.099301 4.1925E-05 0.05435 2.2947E-05 0.15365 6.4872E-05 422.203315391469 427.207445647504 60.066 0.61207 60.066 59.711 60.323 0 188 43 7 0 0 0 0.016974 2 27106 113.82 67.469 1 0.66041 0.83345 0 76496000 47604000 28892000 6041 1084 3106 3461 9873;9874 9874 TESPATAAETASEELDNR 18 0 1 Phospho (STY) _TESPATAAET(ph)ASEELDNR_ T(0.001)ES(0.014)PAT(0.037)AAET(0.795)AS(0.153)EELDNR T(-27.83)ES(-17.7)PAT(-13.33)AAET(7.16)AS(-7.16)EELDNR 0 0 1 0 Q9NTJ3;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 657.9451 3 657.944151 1970.81062 76329.23 0.7324 0.00048188 0.0050206 3.3033E-06 0.73742 0.00048518 657.944113538258 661.280134151828 58.376 0.83606 58.376 57.986 58.822 3.8147E-06 288 66 6 0 0 0 5.4809E-06 1 25710 53.342 43.242 5 0.73287 0.87973 0 17766000 10058000 7708000 6042 1220 3107 3462 9875 9875 2474;2475;2993;2994;2995 TESPATAAETASEELDNR 18 0 1 Phospho (STY) _TESPATAAETAS(ph)EELDNR_ TESPATAAET(0.179)AS(0.821)EELDNR T(-83.64)ES(-80.58)PAT(-62.4)AAET(-6.61)AS(6.61)EELDNR 0 0 1 0 Q9NTJ3;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 986.3673 2 986.412589 1970.81062 61903.81 0.40528 0.00039977 0.46678 0.00046043 0.87205 0.00086021 986.412925687933 991.416990785031 74.359 0.8653 74.359 73.938 74.803 0 310 74 7 0 0 0 4.5164E-13 1 37865 94.281 78.159 5 1.0397 1.3028 0 40852000 18277000 22575000 6043 1220 3107 3462 9876 9876 2474;2475;2993;2994;2995 TESPATAAETASEELDNR 18 0 1 Phospho (STY) _TES(ph)PATAAETASEELDNR_ T(0.161)ES(0.819)PAT(0.02)AAETASEELDNR T(-7.08)ES(7.08)PAT(-16.1)AAET(-71.71)AS(-79.68)EELDNR 0 0 1 0 Q9NTJ3;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 986.9114 2 986.412589 1970.81062 61253.42 0.46049 0.00045423 -0.21944 -0.00021646 0.24105 0.00023777 986.913526242521 991.416744493976 86.377 1.0969 86.377 85.877 86.974 0 445 104 8 0 0 0 5.7822E-13 2 47041 92.439 77.238 5 0.78993 0.99638 0 66585000 35592000 30993000 6044 1220 3107 3462 9877;9878 9878 2474;2475;2993;2994;2995 TESPATAAETASEELDNR 18 0 1 Phospho (STY) _TES(ph)PATAAETASEELDNR_ TES(1)PATAAETASEELDNR T(-58.4)ES(58.4)PAT(-100.8)AAET(-227.59)AS(-293.11)EELDNR 0 0 1 0 Q9NTJ3;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 991.4181 2 986.412589 1970.81062 60818.38 0.60953 0.00060124 -0.27027 -0.0002666 0.33925 0.00033464 986.412952824321 991.416446541801 94.945 3.5419 94.945 93.802 97.344 0 2157 299 14 0 0 0 0 5 53586 401.36 379.32 5 0.79536 1.0113 0 5259300000 2970000000 2289300000 6045 1220 3107 3462 9879;9880;9881;9882;9883 9882 2474;2475;2993;2994;2995 TESPATAAETASEELDNR 18 0 1 Phospho (STY) _TES(ph)PATAAETASEELDNR_ T(0.017)ES(0.982)PAT(0.001)AAETASEELDNR T(-17.52)ES(17.52)PAT(-31.65)AAET(-71.98)AS(-71.98)EELDNR 0 0 1 0 Q9NTJ3;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 986.9095 2 986.412589 1970.81062 60713.49 0.75673 0.00074645 -3.1775 -0.0031343 -2.4207 -0.0023878 986.909556745699 992.413303371317 97.466 0.44155 97.466 97.344 97.786 0 92 36 5 0 0 0 1.488E-10 1 55131 86.016 69.763 5 0.81348 0.99916 0 23002000 12938000 10064000 6046 1220 3107 3462 9884 9884 2474;2475;2993;2994;2995 TESPATAAETASEELDNR 18 0 1 Phospho (STY) _TES(ph)PATAAETASEELDNR_ T(0.022)ES(0.94)PAT(0.037)AAETASEELDNR T(-16.22)ES(14.01)PAT(-14.01)AAET(-61.67)AS(-66.41)EELDNR 0 0 1 0 Q9NTJ3;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 986.9141 2 986.412589 1970.81062 61549.47 0.33946 0.00033484 0.48093 0.0004744 0.82039 0.00080924 986.413833956381 991.41874838786 145.27 0.15581 145.27 145.25 145.41 0 11 4 5 0 0 0 1.3684E-10 1 83683 86.455 75.797 5 0.66071 0.72685 0 7731300 4368100 3363200 6047 1220 3107 3462 9885 9885 2474;2475;2993;2994;2995 TESPATAAETASEELDNR 18 0 1 Phospho (STY) _TES(ph)PATAAETASEELDNR_ T(0.036)ES(0.927)PAT(0.036)AAETASEELDNR T(-14.06)ES(14.06)PAT(-14.06)AAET(-48.11)AS(-54.87)EELDNR 0 0 1 0 Q9NTJ3;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 986.4133 2 986.412589 1970.81062 NaN NaN NaN -0.063728 -6.2862E-05 NaN NaN NaN NaN 98.272 0.1333 98.272 98.203 98.336 -7.6294E-06 0 0 0 3.1964E-07 1 55743 61.815 50.047 5 NaN NaN 0 5878900 5878900 0 6048 1220 3107 3462 9886 9886 2474;2475;2993;2994;2995 TESPATAAETASEELDNR 18 0 1 Phospho (STY) _T(ph)ESPATAAETASEELDNR_ T(0.503)ES(0.419)PAT(0.077)AAETASEELDNR T(0.79)ES(-0.79)PAT(-8.12)AAET(-34.89)AS(-40.63)EELDNR 0 0 1 0 Q9NTJ3;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 991.4183 2 986.412589 1970.81062 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.945 1 85.945 85.445 86.445 7.6294E-06 0 0 0 0.0031533 1 46498 55.314 37.946 5 6049 1220 3107 3462 9887 9887 2474;2475;2993;2994;2995 TESPATAAETASEELDNR 18 0 1 Phospho (STY) _T(ph)ESPATAAETASEELDNR_ T(0.454)ES(0.454)PAT(0.092)AAETASEELDNR T(0)ES(0)PAT(-6.94)AAET(-44.14)AS(-53.68)EELDNR 0 0 1 0 Q9NTJ3;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 986.4161 2 986.412589 1970.81062 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.26 1 100.26 99.761 100.76 0 0 0 0 0.0017963 1 57360 58.83 47.568 5 6050 1220 3107 3462 9888 9888 2474;2475;2993;2994;2995 TESPATAAETASEELDNR 18 0 1 Phospho (STY) _T(ph)ESPATAAETASEELDNR_ T(0.422)ES(0.322)PAT(0.256)AAETASEELDNR T(1.17)ES(-1.17)PAT(-2.16)AAET(-45.23)AS(-54.62)EELDNR 0 0 1 0 Q9NTJ3;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 992.4203 2 986.412589 1970.81062 61935.55 0.46425 0.00045794 0.25761 0.00025411 0.72186 0.00071205 986.41292857864 991.417192048209 44.12 1.9111 44.12 43.166 45.077 0 885 175 6 0 0 0 1.2392E-09 1 25990 85.576 69.083 5 1.4359 0.99672 0 40144000 16103000 24041000 6051 1220 3107 3462 9889 9889 2474;2475;2993;2994;2995 TESPATAAETASEELDNR 18 0 1 Phospho (STY) _TESPATAAET(ph)ASEELDNR_ TES(0.001)PAT(0.03)AAET(0.83)AS(0.138)EELDNR T(-43.83)ES(-28.08)PAT(-14.42)AAET(7.78)AS(-7.78)EELDNR 0 0 1 0 Q9NTJ3;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 657.9451 3 657.944151 1970.81062 75060.07 1.1437 0.00075247 0.15732 0.00010351 1.301 0.00085598 657.944126644224 661.280453466067 44.021 2.2895 44.021 43.08 45.369 0 1251 208 8 0 0 0 3.2699E-08 2 26003 75.646 65.27 5 1.5277 1.0366 0 62609000 23998000 38611000 6052 1220 3107 3462 9890;9891 9890 2474;2475;2993;2994;2995 TESPATAAETASEELDNR 18 0 1 Phospho (STY) _TES(ph)PATAAETASEELDNR_ T(0.008)ES(0.454)PAT(0.454)AAET(0.081)AS(0.002)EELDNR T(-17.3)ES(0)PAT(0)AAET(-7.51)AS(-22.96)EELDNR 0 0 1 0 Q9NTJ3;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 657.945 3 657.944151 1970.81062 74294.23 1.0227 0.00067286 0.072482 4.7689E-05 1.0952 0.00072055 657.944157835688 661.280254370208 48.725 2.5894 48.725 47.599 50.188 0 1429 246 10 0 0 0 1.8503E-06 1 29062 63.918 46.636 5 1.5742 1.0582 0 99460000 39371000 60089000 6053 1220 3107 3462 9892 9892 2474;2475;2993;2994;2995 TESPATAAETASEELDNR 18 0 1 Phospho (STY) _T(ph)ESPATAAETASEELDNR_ T(0.515)ES(0.434)PAT(0.051)AAETASEELDNR T(0.74)ES(-0.74)PAT(-10.08)AAET(-48.07)AS(-57.09)EELDNR 0 0 1 0 Q9NTJ3;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 986.4087 2 986.412589 1970.81062 61068.65 0.41418 0.00040856 0.1452 0.00014323 0.55938 0.00055178 986.914072837719 991.417069017315 92.635 1.2567 92.635 91.941 93.198 0 690 124 7 0 0 0 2.149E-05 2 59488 66.893 57.362 5 1.5791 1.0713 0 63127000 25464000 37663000 6054 1220 3107 3462 9893;9894 9894 2474;2475;2993;2994;2995 TESPATAAETASEELDNR 18 0 1 Phospho (STY) _TES(ph)PATAAETASEELDNR_ T(0.02)ES(0.98)PATAAETASEELDNR T(-16.92)ES(16.92)PAT(-52.78)AAET(-141.55)AS(-153.46)EELDNR 0 0 1 0 Q9NTJ3;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 986.4138 2 986.412589 1970.81062 60720.17 0.56068 0.00055306 -0.050532 -4.9846E-05 0.51014 0.00050321 986.414502810657 991.417434817041 101.83 3.2971 101.83 101.04 104.34 -7.6294E-06 2561 315 12 0 0 0 5.3852E-117 5 66075 199.08 179.78 5 1.5575 0.96684 0 5221600000 2030200000 3191400000 6055 1220 3107 3462 9895;9896;9897;9898;9899 9896 2474;2475;2993;2994;2995 TESPATAAETASEELDNR 18 0 1 2 Phospho (STY) _TES(ph)PATAAETAS(ph)EELDNR_ TES(1)PATAAET(0.02)AS(0.98)EELDNR T(-38.51)ES(38.51)PAT(-89.46)AAET(-16.88)AS(16.88)EELDNR 0 0 2 0 Q9NTJ3;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1026.3965 2 1026.39575 2050.77695 59658.81 0.42574 0.00043698 0.69813 0.00071656 1.1239 0.0011535 1026.39653251699 1031.40009660166 79.312 1.4656 79.312 78.437 79.903 0 679 132 9 0 0 0 2.0634E-249 2 41754 260.49 227.08 10 0.71025 0.8975 0 156750000 89808000 66946000 6056 1220 3107 3463 9900;9901 9901 2474;2475;2993;2994;2995 TESPATAAETASEELDNR 18 0 1 2 Phospho (STY) _TES(ph)PATAAETAS(ph)EELDNR_ T(0.192)ES(0.797)PAT(0.011)AAET(0.142)AS(0.858)EELDNR T(-6.19)ES(6.19)PAT(-18.52)AAET(-7.83)AS(7.83)EELDNR 0 0 2 0 Q9NTJ3;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1026.3964 2 1026.39575 2050.77695 59908.2 0.51609 0.00052971 0.72225 0.00074131 1.2383 0.001271 1026.39603188646 1031.40070356444 88.146 1.0488 88.146 87.788 88.837 0 618 102 10 0 0 0 8.4956E-08 1 56924 75.224 63.059 10 1.8188 1.2179 0 120720000 46605000 74111000 6057 1220 3107 3463 9902 9902 2474;2475;2993;2994;2995 TESPATAAETASEELDNR 18 0 1 Unmodified _TESPATAAETASEELDNR_ 0 0 0 0 Q9NTJ3;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 951.9365 2 946.429423 1890.84429 59865.34 1.0796 0.0010218 -0.61775 -0.00058466 0.46189 0.00043715 946.930751459303 951.434432514805 90.071 0.68391 90.071 89.821 90.505 0 168 59 4 0 0 0 2.1377E-05 1 49769 57.804 45.173 1 0.73546 0.90957 0 33799000 17070000 16730000 6058 1220 3107 3464 9903 9903 TESPATAAETASEELDNR 18 0 1 Unmodified _TESPATAAETASEELDNR_ 0 0 0 0 Q9NTJ3;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 951.436 2 946.429423 1890.84429 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.436 1 90.436 89.936 90.936 0 0 0 0 0.0050473 1 49752 43.03 28.058 1 6059 1220 3107 3464 9904 9904 TESPATAAETASEELDNR 18 0 1 Unmodified _TESPATAAETASEELDNR_ 0 0 0 0 Q9NTJ3;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 951.4379 2 946.429423 1890.84429 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.554 1 90.554 90.054 91.054 0 0 0 0 0.023711 1 49843 33.204 17.832 1 6060 1220 3107 3464 9905 9905 TESPATAAETASEELDNR 18 0 1 3 Phospho (STY) _TES(ph)PATAAET(ph)AS(ph)EELDNR_ T(0.395)ES(0.48)PAT(0.142)AAET(0.99)AS(0.994)EELDNR T(-0.86)ES(0.86)PAT(-5.58)AAET(20.81)AS(24.72)EELDNR 0 0 3 0 Q9NTJ3;Q6P169;C9JR83;Q6NSG3;Q58F29;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1071.3821 2 1066.37892 2130.74329 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.497 1 71.497 70.997 71.997 0 0 0 0 0.0053345 1 35925 44.816 36.511 10 6061 1220 3107 3465 9906 9906 2474;2475;2993;2994;2995 TESPIKLSPATPSR 14 1 1 2 Phospho (STY) _TES(ph)PIKLS(ph)PATPSR_ T(0.115)ES(0.885)PIKLS(0.984)PAT(0.013)PS(0.003)R T(-8.86)ES(8.86)PIKLS(18.72)PAT(-18.72)PS(-25.45)R 0 0 2 1 Q9Y6X9 Q9Y6X9 Q9Y6X9 MORC2 MORC family CW-type zinc finger protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 822.3773 2 822.375711 1642.73687 69437.98 0.86458 0.00071101 -0.6709 -0.00055173 0.19368 0.00015928 822.375019895311 831.887183897439 77.316 0.37154 77.316 77.157 77.529 0 107 33 5 0 0 0 2.4145E-05 1 40289 80.545 66.427 10 0.60028 0.67482 0 18905000 9463200 9441500 6062 1257 3108 3466 9907 9907 2591;2592;3009 TEVSPVPR 8 0 1 Phospho (STY) _TEVS(ph)PVPR_ T(0.001)EVS(0.999)PVPR T(-32.89)EVS(32.89)PVPR 0 0 1 0 E9PPY3;O43159 E9PPY3 E9PPY3 RRP8 Ribosomal RNA-processing protein 8 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 482.7292 2 482.728607 963.442662 88436.92 0.64832 0.00031296 -0.23282 -0.00011239 0.4155 0.00020057 482.728548908203 487.732698662532 39.093 0.56332 39.093 38.81 39.373 0 163 49 5 0 0 0 0.03169 1 22523 43.308 35.383 2 0.6289 0.51538 0 6238000 3581300 2656800 6063 815 3109 3467 9908 9908 1410 TFHHVYSGK 9 1 0 Unmodified _TFHHVYSGK_ 0 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 359.1822 3 359.182169 1074.52468 101465.7 0.1854 6.6592E-05 0.046919 1.6852E-05 0.23232 8.3445E-05 359.18209010233 361.853540393882 92.747 2.4082 92.747 91.23 93.639 0 546 205 5 0 0 0 0.00063068 5 51212 72.325 65.394 1 1.1141 1.4002 0 53846000 27896000 25950000 6064 1214 3110 3468 9909;9910;9911;9912;9913 9911 TFLHTVQR 8 0 1 Unmodified _TFLHTVQR_ 0 0 0 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 506.2835 2 501.279983 1000.54541 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.965 1 86.965 86.465 87.465 0 0 0 0 0.021152 1 47208 62.659 22.555 1 6065 1212 3111 3469 9914 9914 TFMEITLEEDSIER 14 0 1 Oxidation (M),Phospho (STY) _TFM(ox)EIT(ph)LEEDSIER_ TFM(1)EITLEEDSIER TFMEIT(1)LEEDSIER TFM(124.09)EITLEEDSIER T(-77.06)FMEIT(57.85)LEEDS(-57.85)IER 0 1 1 0 B3KRQ2;Q86XI2;B4DHE5;B4DXB7;Q9NXD3;H0Y6U5 B3KRQ2 B3KRQ2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 909.8922 2 904.886632 1807.75871 63651.94 1.0192 0.00092229 -0.084667 -7.6614E-05 0.93456 0.00084567 905.388174774388 909.890640826954 108.32 0.82288 108.32 107.88 108.71 0 210 63 5 0 0 0 3.5003E-23 2 63354 124.09 101.88 3 1.293 1.589 0 30826000 12513000 18313000 6066 593 3112 3470 9915;9916 9915 149 2776 TFMEITLEEDSIER 14 0 1 Oxidation (M),Phospho (STY) _TFM(ox)EIT(ph)LEEDSIER_ TFM(1)EITLEEDSIER T(0.001)FMEIT(0.987)LEEDS(0.012)IER TFM(42.34)EITLEEDSIER T(-28.66)FMEIT(19.2)LEEDS(-19.2)IER 0 1 1 0 B3KRQ2;Q86XI2;B4DHE5;B4DXB7;Q9NXD3;H0Y6U5 B3KRQ2 B3KRQ2 NCAPG2 Condensin-2 complex subunit G2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 910.3909 2 904.886632 1807.75871 66846.96 1.2082 0.0010933 0.1645 0.00014885 1.3727 0.0012421 904.886638825812 910.392661181498 115.27 0.75555 115.27 114.89 115.65 0 229 66 6 0 0 0 0.0050142 1 74194 42.338 31.483 3 1.5211 1.2226 0 8072100 3438900 4633200 6067 593 3112 3470 9917 9917 149 2776 TFNEPGSPIVK 11 1 0 Phospho (STY) _TFNEPGS(ph)PIVK_ TFNEPGS(1)PIVK T(-98.87)FNEPGS(98.87)PIVK 0 0 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 634.8005 2 634.799761 1267.58497 76303.81 0.67608 0.00042917 0.07567 4.8035E-05 0.75175 0.00047721 634.79944901224 638.806747433462 82.699 1.6409 82.699 82.155 83.796 0 468 155 5 0 0 0 1.5301E-08 5 44345 107.09 78.914 2 0.6434 0.80263 0 70059000 43333000 26725000 6068 1167 3113 3471 9918;9919;9920;9921;9922 9920 2273 TFNEPGSPIVK 11 1 0 Phospho (STY) _TFNEPGS(ph)PIVK_ TFNEPGS(1)PIVK T(-87.21)FNEPGS(87.21)PIVK 0 0 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 634.8 2 634.799761 1267.58497 76136.78 0.98295 0.00062398 0.16389 0.00010404 1.1468 0.00072802 634.799802898882 638.806888212173 84.237 1.4707 84.237 83.72 85.19 0 745 133 8 0 0 0 1.8133E-08 3 54243 105.03 71.235 2 1.1121 0.7379 0 78286000 35863000 42423000 6069 1167 3113 3471 9923;9924;9925 9925 2273 TFNTSTGGLLLPSDTK 16 1 0 Phospho (STY) _TFNTS(ph)TGGLLLPSDTK_ TFNT(0.006)S(0.772)T(0.223)GGLLLPSDTK T(-50.06)FNT(-21.36)S(5.4)T(-5.4)GGLLLPS(-60.04)DT(-65.72)K 0 0 1 0 B4DE32;B1AHC9;B2RDN9;A0A024R1N4;P12956;B4E356 B4DE32 B4DE32 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 866.4164 2 866.413675 1730.8128 66430.48 0.96695 0.00083778 0.26132 0.00022641 1.2283 0.0010642 866.41388578729 870.421260094749 112.93 0.93053 112.93 112.53 113.46 0 448 88 7 0 0 0 4.0617E-22 1 66880 114.54 96.271 6 0.36435 0.45718 0 57013000 40080000 16933000 6070 50 3114 3472 9926 9926 63 TFPSSPGDSLEDQLK 15 1 0 Phospho (STY) _TFPS(ph)SPGDSLEDQLK_ T(0.004)FPS(0.495)S(0.495)PGDS(0.006)LEDQLK T(-21.18)FPS(0)S(0)PGDS(-19.45)LEDQLK 0 0 1 0 Q59H79;Q9UBC3;Q2PJS8;B3KM53;B4DSJ7;B4DUZ5 Q59H79 Q59H79 DNMT3B DNA (cytosine-5)-methyltransferase 3B ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 854.8803 2 850.874382 1699.73421 NaN NaN NaN -0.23399 -0.0001991 NaN NaN NaN NaN 104.43 0.06813 104.43 104.38 104.45 0 0 0 0 0.0035789 1 60452 44.299 30.946 4 NaN NaN 0 2057500 0 2057500 6071 1093 3115 3473 9927 9927 2061;2062 TFPSSPGDSLEDQLK 15 1 0 Phospho (STY) _TFPSS(ph)PGDSLEDQLK_ T(0.007)FPS(0.48)S(0.498)PGDS(0.015)LEDQLK T(-18.77)FPS(-0.16)S(0.16)PGDS(-15.21)LEDQLK 0 0 1 0 Q59H79;Q9UBC3;Q2PJS8;B3KM53;B4DSJ7;B4DUZ5 Q59H79 Q59H79 DNMT3B DNA (cytosine-5)-methyltransferase 3B ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 851.378 2 850.874382 1699.73421 NaN NaN NaN 0.5118 0.00043548 NaN NaN NaN NaN 104.69 0.71071 104.69 104.41 105.12 0 0 0 0 0.0047061 1 60549 42.242 26.67 4 NaN NaN 0 6366500 6366500 0 6072 1093 3115 3473 9928 9928 2061;2062 TFSLTEVR 8 0 1 Phospho (STY) _TFS(ph)LTEVR_ T(0.123)FS(0.864)LT(0.013)EVR T(-8.45)FS(8.45)LT(-18.37)EVR 0 0 1 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 521.7474 2 516.741715 1031.46888 85136.07 0.75447 0.00038987 0.020138 1.0406E-05 0.77461 0.00040027 516.741700392908 521.745768564145 97.231 1.1716 97.231 96.651 97.822 0 330 97 5 0 0 0 0.0076548 2 54736 68.847 59.259 3 0.74379 0.93022 0 39759000 22326000 17432000 6073 944 3116 3474 9929;9930 9929 1633;2860 TFSLTEVR 8 0 1 2 Phospho (STY) _T(ph)FS(ph)LTEVR_ T(1)FS(0.986)LT(0.014)EVR T(42.25)FS(18.43)LT(-18.43)EVR 0 0 2 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 561.7292 2 556.72488 1111.43521 82610.63 0.99255 0.00055258 -0.38173 -0.00021252 0.61082 0.00034006 556.724604302861 561.728724203015 105.4 0.88622 105.4 104.94 105.83 0 166 60 6 0 0 0 0.013952 2 61226 53.124 43.137 3 1.0965 1.2751 0 12816000 6492300 6323400 6074 944 3116 3475 9931;9932 9932 1633;2860 TFVLTPELSPGK 12 1 0 Phospho (STY) _TFVLTPELS(ph)PGK_ TFVLT(0.003)PELS(0.997)PGK T(-83.93)FVLT(-25.36)PELS(25.36)PGK 0 0 1 0 Q96DY7 Q96DY7 Q96DY7 MTBP Mdm2-binding protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 688.8522 2 684.844168 1367.67378 74718.35 0.69541 0.00047625 -0.56003 -0.00038353 0.13538 9.2712E-05 685.344649195217 688.851023169144 115.95 0.55647 115.95 115.75 116.3 7.6294E-06 142 49 4 0 0 0 9.4508E-06 4 69158 91.858 82.675 3 0.89903 1.0662 0 8515400 4970600 3544800 6075 1173 3117 3476 9933;9934;9935;9936 9934 2305 TFVLTPELSPGK 12 1 0 Phospho (STY) _TFVLTPELS(ph)PGK_ TFVLT(0.021)PELS(0.979)PGK T(-56.2)FVLT(-16.73)PELS(16.73)PGK 0 0 1 0 Q96DY7 Q96DY7 Q96DY7 MTBP Mdm2-binding protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 689.3534 2 684.844168 1367.67378 75388.05 1.0426 0.00071404 0.06871 4.7056E-05 1.1113 0.00076109 685.345637639389 688.851316539124 122.85 0.75336 122.85 122.5 123.25 0 248 69 5 0 0 0 0.0077349 1 79357 57.106 52.411 3 0.96719 0.8138 0 4893400 2676300 2217100 6076 1173 3117 3476 9937 9937 2305 TGAAPIIDVVR 11 0 1 Unmodified _TGAAPIIDVVR_ 0 0 0 0 Q9BQQ5;E9PLL6;Q6NZ52;P46776;E9PJD9;E9PLX7 Q9BQQ5 Q9BQQ5 L27a;RPL27A 60S ribosomal protein L27a MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 556.3274 2 556.327131 1110.63971 82908 0.9288 0.00051672 -0.28981 -0.00016123 0.63899 0.00035549 556.326894537384 561.33106253 99.844 0.67061 99.844 99.526 100.2 0 201 65 4 0 0 0 0.0062379 1 64104 74.841 63.248 1 0.74052 0.61516 0 4794900 2251900 2542900 6077 813 3118 3477 9938 9938 TGDLGIPPNPEDRSPSPEPIYNSEGK 26 1 1 2 Phospho (STY) _TGDLGIPPNPEDRS(ph)PS(ph)PEPIYNSEGK_ TGDLGIPPNPEDRS(0.97)PS(0.932)PEPIY(0.07)NS(0.028)EGK T(-39.39)GDLGIPPNPEDRS(16.94)PS(12.9)PEPIY(-12.9)NS(-17.4)EGK 0 0 2 1 A0A024R588;A0A024R566;A0A024R5D9;A0A024R572;Q15637 A0A024R588 A0A024R588 SF1 Splicing factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 982.7657 3 976.089636 2925.24708 61272.15 1.2508 0.0012209 -0.69666 -0.00068001 0.55415 0.0005409 976.423650380598 982.430222740186 101.62 2.0419 101.62 100.77 102.82 0 799 162 7 0 0 0 1.1695E-12 2 58559 54.072 45.685 10 1.2091 1.4332 0 56910000 26062000 30848000 6078 103 3119 3478 9939;9940 9939 137;138 TGGPAYGPSSDVSTASETESEK 22 1 0 Phospho (STY) _TGGPAYGPSSDVSTAS(ph)ETESEK_ TGGPAYGPS(0.025)S(0.025)DVS(0.097)T(0.137)AS(0.484)ET(0.137)ES(0.097)EK T(-40.26)GGPAY(-36.88)GPS(-12.93)S(-12.93)DVS(-7)T(-5.48)AS(5.48)ET(-5.48)ES(-7)EK 0 0 1 0 P51116 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1118.9595 2 1118.9601 2235.90565 59644.68 0.28986 0.00032434 0.59286 0.00066338 0.88271 0.00098772 1119.46303067918 1122.96790939506 57.551 0.68207 57.551 57.232 57.914 0 228 56 6 0 0 0 2.5347E-06 1 25313 45.916 23.195 9 1.5667 1.8762 0 14132000 5984200 8148000 6079 1003 3120 3479 9941 9941 1829 TGLLFSPDVDEK 12 1 0 Phospho (STY) _TGLLFS(ph)PDVDEK_ TGLLFS(1)PDVDEK T(-57.32)GLLFS(57.32)PDVDEK 0 0 1 0 Q6P4F7;H3BQ41;H3BR51 Q6P4F7 Q6P4F7 ARHGAP11A Rho GTPase-activating protein 11A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 705.3303 2 700.82089 1399.62723 74543.77 0.94173 0.00065998 -0.2783 -0.00019504 0.66343 0.00046495 700.820806999331 704.827783376803 115.74 0.73458 115.74 115.4 116.13 -7.6294E-06 261 64 6 0 0 0 8.4018E-06 3 69038 92.856 92.856 2 1.4187 1.7411 0 21388000 7578900 13809000 6080 1122 3121 3480 9942;9943;9944 9943 2138 TGLLFSPDVDEK 12 1 0 Phospho (STY) _TGLLFS(ph)PDVDEK_ TGLLFS(1)PDVDEK T(-39.05)GLLFS(39.05)PDVDEK 0 0 1 0 Q6P4F7;H3BQ41;H3BR51 Q6P4F7 Q6P4F7 ARHGAP11A Rho GTPase-activating protein 11A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 704.829 2 700.82089 1399.62723 72525.49 1.1322 0.0007935 0.17814 0.00012485 1.3104 0.00091835 700.821163790373 704.828126154696 122.37 1.3018 122.37 121.77 123.08 7.6294E-06 519 120 6 0 0 0 0.0095464 2 79335 50.155 50.155 2 5.6717 3.831 0 26121000 4966100 21154000 6081 1122 3121 3480 9945;9946 9946 2138 TGPAAAQVQVGKQEEDSR 18 1 1 Phospho (STY) _TGPAAAQVQVGKQEEDS(ph)R_ TGPAAAQVQVGKQEEDS(1)R T(-49.08)GPAAAQVQVGKQEEDS(49.08)R 0 0 1 1 J3KQ96;E7ETY2;Q13428;Q59FZ2 J3KQ96 J3KQ96 TCOF1 Treacle protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 657.3107 3 650.968743 1949.8844 75357.95 1.3009 0.00084687 -1.0925 -0.00071117 0.20847 0.00013571 651.633863936201 656.976855190763 33.663 0.61155 33.663 33.322 33.934 0 216 44 8 0 0 0 3.7693E-05 1 18337 49.106 45.004 2 2.8635 2.1834 0 19748000 8317200 11431000 6082 792 3122 3481 9947 9947 1355 TGPLSAQPSVEK 12 1 0 Phospho (STY) _TGPLSAQPS(ph)VEK_ TGPLS(0.001)AQPS(0.999)VEK T(-78.21)GPLS(-28.43)AQPS(28.43)VEK 0 0 1 0 D6R9S4;Q09GN1;Q71F23;A5D8X7 D6R9S4 D6R9S4 CENPU;MLF1IP Centromere protein U MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 647.3088 2 647.30795 1292.60135 75385.92 1.0419 0.00067445 -0.21722 -0.00014061 0.82471 0.00053384 647.307827538989 651.31466178492 60.685 0.94218 60.685 60.181 61.123 0 274 65 8 0 0 0 0.00016277 1 27499 88.78 67.72 3 0.45628 0.57894 0 38246000 26155000 12091000 6083 772 3123 3482 9948 9948 1308 TGQAGSLSGSPKPFSPQLSAPITTK 25 2 0 2 Phospho (STY) _TGQAGSLSGS(ph)PKPFS(ph)PQLSAPITTK_ TGQAGS(0.003)LS(0.132)GS(0.865)PKPFS(0.994)PQLS(0.005)APITTK T(-49.12)GQAGS(-24.25)LS(-8.19)GS(8.19)PKPFS(22.81)PQLS(-22.81)APIT(-39.1)T(-38.74)K 0 0 2 1 A0A087WYS3;H7C4X9;A0A087WVZ6;Q9ULU4;A0A087WV57;A6H8Y8;Q5JV90 A0A087WYS3 A0A087WYS3 ZMYND8;DKFZp564P1772 Protein kinase C-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 878.76 3 873.081864 2616.22376 64896.96 0.64879 0.00056644 0.33952 0.00029643 0.98831 0.00086287 873.416396752495 878.759271352399 109.36 0.92152 109.36 108.99 109.92 0 602 69 12 0 0 0 3.0787E-26 3 64092 89.266 82.617 28 0.63011 0.84024 0 420990000 260310000 160680000 6084 258 3124 3483 9949;9950;9951 9950 410;412;413;414 TGQAGSLSGSPKPFSPQLSAPITTK 25 2 0 4 Phospho (STY) _TGQAGS(ph)LS(ph)GS(ph)PKPFS(ph)PQLSAPITTK_ T(0.041)GQAGS(0.982)LS(0.982)GS(0.982)PKPFS(0.978)PQLS(0.022)APIT(0.007)T(0.007)K T(-18.78)GQAGS(18.78)LS(18.78)GS(18.78)PKPFS(18.54)PQLS(-18.54)APIT(-28.56)T(-28.56)K 0 0 4 1 A0A087WYS3;H7C4X9;A0A087WVZ6;Q9ULU4;A0A087WV57;A6H8Y8;Q5JV90 A0A087WYS3 A0A087WYS3 ZMYND8;DKFZp564P1772 Protein kinase C-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 926.7277 3 926.392751 2776.15642 62818.4 0.61557 0.00057026 0.83997 0.00077815 1.4555 0.0013484 927.061894249659 932.07047524703 121.01 0.56252 121.01 120.72 121.28 0 186 43 7 0 0 0 1.8471E-06 1 72900 42.454 42.454 70 0.69738 0.80959 0 21356000 12335000 9021400 6085 258 3124 3484 9952 9952 410;412;413;414 TGSPGPELLFHEGQQK 16 1 0 Phospho (STY) _TGS(ph)PGPELLFHEGQQK_ T(0.012)GS(0.988)PGPELLFHEGQQK T(-19.25)GS(19.25)PGPELLFHEGQQK 0 0 1 0 A6NHN7;A6NHB5;Q14202;A8K3Z7;A6NL54 A6NHN7 A6NHN7 ZMYM3 Zinc finger MYM-type protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 602.2813 3 602.280369 1803.81928 78035.95 1.504 0.00090581 -0.45813 -0.00027592 1.0458 0.00062989 602.280217855691 604.951673818039 99.674 1.4007 99.674 99.109 100.51 0 537 115 6 0 0 0 2.6243E-06 6 57060 72.421 69.186 2 0.73106 0.90514 0 187860000 106230000 81629000 6086 426 3125 3485 9953;9954;9955;9956;9957;9958 9956 740 TGSPGPELLFHEGQQK 16 1 0 Phospho (STY) _TGS(ph)PGPELLFHEGQQK_ T(0.039)GS(0.961)PGPELLFHEGQQK T(-13.93)GS(13.93)PGPELLFHEGQQK 0 0 1 0 A6NHN7;A6NHB5;Q14202;A8K3Z7;A6NL54 A6NHN7 A6NHN7 ZMYM3 Zinc finger MYM-type protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 906.9266 2 902.916916 1803.81928 63095.27 1.5378 0.0013885 -0.42144 -0.00038053 1.1163 0.001008 902.917375631187 906.922186797542 99.674 1.7322 99.674 98.79 100.52 0 747 143 9 0 0 0 1.4398E-11 4 57393 91.657 78.326 2 0.77807 0.96301 0 221150000 129730000 91422000 6087 426 3125 3485 9959;9960;9961;9962 9962 740 TGSPGPELLFHEGQQK 16 1 0 Phospho (STY) _TGS(ph)PGPELLFHEGQQK_ T(0.016)GS(0.984)PGPELLFHEGQQK T(-17.78)GS(17.78)PGPELLFHEGQQK 0 0 1 0 A6NHN7;A6NHB5;Q14202;A8K3Z7;A6NL54 A6NHN7 A6NHN7 ZMYM3 Zinc finger MYM-type protein 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 604.9521 3 602.280369 1803.81928 78045.77 0.8416 0.00050688 0.095711 5.7645E-05 0.93731 0.00056452 602.280497705076 604.951840072609 95.759 0.94221 95.759 95.279 96.222 7.6294E-06 612 93 10 0 0 0 0.00012866 1 61417 48.315 48.315 2 2.0116 1.3451 0 129280000 42039000 87236000 6088 426 3125 3485 9963 9963 740 TGSPGPELLFHEGQQK 16 1 0 Phospho (STY) _TGS(ph)PGPELLFHEGQQK_ T(0.066)GS(0.934)PGPELLFHEGQQK T(-11.52)GS(11.52)PGPELLFHEGQQK 0 0 1 0 A6NHN7;A6NHB5;Q14202;A8K3Z7;A6NL54 A6NHN7 A6NHN7 ZMYM3 Zinc finger MYM-type protein 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 902.9179 2 902.916916 1803.81928 64209.03 0.94782 0.0008558 0.40096 0.00036203 1.3488 0.0012178 902.917255024496 906.924207493599 95.79 1.2349 95.79 95.184 96.419 0 727 122 9 0 0 0 2.8467E-05 1 61547 70.197 70.197 2 2.0269 1.3534 0 305800000 105770000 200030000 6089 426 3125 3485 9964 9964 740 TGSPTFVR 8 0 1 Phospho (STY) _TGS(ph)PTFVR_ TGS(1)PTFVR T(-38.05)GS(38.05)PT(-40.93)FVR 0 0 1 0 Q9UPP1;B0QZZ4;Q5JPR8;B0QZZ2;B0QZZ3;B0QZE1 Q9UPP1 Q9UPP1 PHF8 Histone lysine demethylase PHF8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 472.7155 2 472.7155 943.416447 89032.8 0.21376 0.00010105 0.092484 4.3719E-05 0.30625 0.00014477 472.715493779931 477.719585766348 58.623 1.4114 58.623 57.872 59.284 0 379 112 5 0 0 0 0.0061893 1 26212 84.213 35.93 3 0.81643 0.998 0 21821000 11104000 10717000 6090 1243 3126 3486 9965 9965 2550 TGSPTFVR 8 0 1 Phospho (STY) _TGS(ph)PTFVR_ T(0.008)GS(0.983)PT(0.008)FVR T(-20.67)GS(20.67)PT(-20.67)FVR 0 0 1 0 Q9UPP1;B0QZZ4;Q5JPR8;B0QZZ2;B0QZZ3;B0QZE1 Q9UPP1 Q9UPP1 PHF8 Histone lysine demethylase PHF8 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 477.7199 2 472.7155 943.416447 NaN NaN NaN NaN NaN NaN NaN NaN NaN 58.122 1 58.122 57.622 58.622 0 0 0 0 0.019278 1 25677 43.308 11.886 3 6091 1243 3126 3486 9966 9966 2550 TGSPTFVR 8 0 1 Phospho (STY) _TGS(ph)PTFVR_ T(0.004)GS(0.995)PTFVR T(-23.54)GS(23.54)PT(-39.37)FVR 0 0 1 0 Q9UPP1;B0QZZ4;Q5JPR8;B0QZZ2;B0QZZ3;B0QZE1 Q9UPP1 Q9UPP1 PHF8 Histone lysine demethylase PHF8 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 472.7159 2 472.7155 943.416447 88574.99 0.43525 0.00020575 -0.053277 -2.5185E-05 0.38197 0.00018056 472.715384809469 477.719512128581 47.559 0.81916 47.559 47.15 47.969 0 352 77 6 0 0 0 0.0058687 2 28363 79.148 35.897 3 1.4322 0.99127 0 41887000 17260000 24627000 6092 1243 3126 3486 9967;9968 9968 2550 TGTITTFEHAHNMR 14 0 1 Oxidation (M) _TGTITTFEHAHNM(ox)R_ TGTITTFEHAHNM(1)R TGTITTFEHAHNM(122.64)R 0 1 0 0 P13639;Q8TA90;Q6PK56 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 548.2621 3 544.591339 1630.75219 81150.74 0.91877 0.00050036 -0.29216 -0.00015911 0.62661 0.00034125 544.59138615323 547.927280522759 95.757 0.51741 95.757 95.628 96.145 0 162 45 7 0 0 0 1.4165E-23 2 53805 122.64 103.39 1 5.0806 6.4163 0 112900000 17314000 95582000 6093 964 3127 3487 9969;9970 9969 272 TGTITTFEHAHNMR 14 0 1 Oxidation (M) _TGTITTFEHAHNM(ox)R_ TGTITTFEHAHNM(1)R TGTITTFEHAHNM(98.53)R 0 1 0 0 P13639;Q8TA90;Q6PK56 P13639 P13639 EEF2 Elongation factor 2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 547.928 3 544.591339 1630.75219 NaN NaN NaN -0.29263 -0.00015936 NaN NaN NaN NaN 96.373 0.64242 96.373 95.995 96.637 0 0 0 0 5.1457E-12 1 54374 98.531 77.578 1 NaN NaN 0 15912000 0 15912000 6094 964 3127 3487 9971 9971 272 TGVHHYSGNNIELGTACGK 19 1 0 Unmodified _TGVHHYSGNNIELGTACGK_ 0 0 0 0 A0A0B4J213;E5RI99;A0A024R9D3;P62888 A0A0B4J213 A0A0B4J213 RPL30 60S ribosomal protein L30 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 672.3186 3 672.318167 2013.93267 74664.16 0.75516 0.00050771 -0.020536 -1.3807E-05 0.73462 0.0004939 672.318024328223 675.323830602524 106.78 2.4612 106.78 105.76 108.22 -7.6294E-06 593 185 5 0 0 0 3.4993E-14 4 62189 89.049 78.005 1 0.73694 0.93031 0 47356000 25668000 21688000 6095 165 3128 3488 9972;9973;9974;9975 9973 TGVHHYSGNNIELGTACGK 19 1 0 Unmodified _TGVHHYSGNNIELGTACGK_ 0 0 0 0 A0A0B4J213;E5RI99;A0A024R9D3;P62888 A0A0B4J213 A0A0B4J213 RPL30 60S ribosomal protein L30 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 674.9896 3 672.318167 2013.93267 NaN NaN NaN NaN NaN NaN NaN NaN NaN 106.62 1 106.62 106.12 107.12 0 0 0 0 2.6171E-06 1 62090 71.376 35.665 1 6096 165 3128 3488 9976 9976 TGVHHYSGNNIELGTACGK 19 1 0 Unmodified _TGVHHYSGNNIELGTACGK_ 0 0 0 0 A0A0B4J213;E5RI99;A0A024R9D3;P62888 A0A0B4J213 A0A0B4J213 RPL30 60S ribosomal protein L30 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 674.9902 3 672.318167 2013.93267 NaN NaN NaN NaN NaN NaN NaN NaN NaN 107.38 1 107.38 106.88 107.88 0 0 0 0 0.0017491 1 62666 56.708 28.858 1 6097 165 3128 3488 9977 9977 THDHQLESSLSPVEVFAK 18 1 0 2 Phospho (STY) _THDHQLES(ph)SLS(ph)PVEVFAK_ T(0.001)HDHQLES(0.629)S(0.629)LS(0.74)PVEVFAK T(-28.65)HDHQLES(0)S(0)LS(1.55)PVEVFAK 0 0 2 0 A8K3X3;Q9H410;Q5JW53 A8K3X3 A8K3X3 DSN1 Kinetochore-associated protein DSN1 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 728.9875 3 728.651853 2182.93373 72907.05 1.0284 0.00074938 -0.14542 -0.00010596 0.88303 0.00064342 728.651852955489 731.323163188109 124.89 1.3504 124.89 123.92 125.27 7.6294E-06 535 122 7 0 0 0 3.8376E-05 2 75662 51.089 46.917 6 0.7325 0.89858 0 21171000 14727000 6444500 6098 455 3129 3489 9978;9979 9978 793;794;795 THLASDDLYK 10 1 0 Unmodified _THLASDDLYK_ 0 0 0 0 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 585.7982 2 581.790578 1161.5666 81894.21 0.72952 0.00042443 -0.39506 -0.00022984 0.33445 0.00019458 581.790112606421 585.797239013474 88.964 0.31749 88.964 88.825 89.142 0 80 28 4 0 0 0 0.0002814 2 48766 90.906 58.065 1 1.0181 1.2234 0 15427000 5996800 9430200 6099 490 3130 3490 9980;9981 9981 THLASDDLYK 10 1 0 Unmodified _THLASDDLYK_ 0 0 0 0 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 585.7975 2 581.790578 1161.5666 82047.43 0.84988 0.00049445 -0.019035 -1.1074E-05 0.83084 0.00048338 581.79051090578 585.797394383154 89.297 0.74948 89.297 89.094 89.843 0 152 66 4 0 0 0 0.0069583 1 48790 72.643 45.389 1 0.90647 1.0926 0 16508000 9101900 7405800 6100 490 3130 3490 9982 9982 THLASDDLYK 10 1 0 Unmodified _THLASDDLYK_ 0 0 0 0 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 585.7983 2 581.790578 1161.5666 NaN NaN NaN -0.13374 -7.7809E-05 NaN NaN NaN NaN 88.343 0.23325 88.343 88.267 88.5 7.6294E-06 0 0 0 3.2347E-05 1 48200 85.807 50.512 1 NaN NaN 0 9120300 0 9120300 6101 490 3130 3490 9983 9983 THLASDDLYK 10 1 0 Unmodified _THLASDDLYK_ 0 0 0 0 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 581.7905 2 581.790578 1161.5666 NaN NaN NaN -0.10114 -5.8843E-05 NaN NaN NaN NaN 89.719 0.21832 89.719 89.582 89.8 0 0 0 0 0.0019211 1 49177 70.552 36.463 1 NaN NaN 0 5255800 5255800 0 6102 490 3130 3490 9984 9984 THLASDDLYK 10 1 0 Unmodified _THLASDDLYK_ 0 0 0 0 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 585.7986 2 581.790578 1161.5666 NaN NaN NaN -0.72237 -0.00042027 NaN NaN NaN NaN 91.536 0.33514 91.536 91.417 91.752 0 0 0 0 0.0047879 1 50528 66.299 39.169 1 NaN NaN 0 5074700 0 5074700 6103 490 3130 3490 9985 9985 THLASDDLYK 10 1 0 Unmodified _THLASDDLYK_ 0 0 0 0 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 585.798 2 581.790578 1161.5666 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.438 1 87.438 86.938 87.938 0 0 0 0 0.0011739 1 47551 74.464 47.21 1 6104 490 3130 3490 9986 9986 THLASDDLYK 10 1 0 Unmodified _THLASDDLYK_ 0 0 0 0 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 581.7908 2 581.790578 1161.5666 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.119 1 88.119 87.619 88.619 0 0 0 0 0.0007035 1 48048 93.111 60.27 1 6105 490 3130 3490 9987 9987 THLASDDLYK 10 1 0 Unmodified _THLASDDLYK_ 0 0 0 0 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 585.798 2 581.790578 1161.5666 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.882 1 89.882 89.382 90.382 -7.6294E-06 0 0 0 0.0054859 1 49340 61.78 38.351 1 6106 490 3130 3490 9988 9988 THLASDDLYK 10 1 0 Unmodified _THLASDDLYK_ 0 0 0 0 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 581.7911 2 581.790578 1161.5666 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.101 1 90.101 89.601 90.601 -7.6294E-06 0 0 0 0.0019384 1 49513 71.349 47.921 1 6107 490 3130 3490 9989 9989 THLASDDLYK 10 1 0 Unmodified _THLASDDLYK_ 0 0 0 0 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 A8K800 RPF2 Ribosome production factor 2 homolog MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 581.791 2 581.790578 1161.5666 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.422 1 90.422 89.922 90.922 0 0 0 0 0.00039746 1 49740 79.974 52.72 1 6108 490 3130 3490 9990 9990 THLSLSHNPEQK 12 1 0 Unmodified _THLSLSHNPEQK_ 0 0 0 0 V9GYY3;A0A024R652;F5H2F4;B7Z809;P11586 V9GYY3 V9GYY3 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 466.9121 3 464.240635 1389.70008 89922.51 0.44797 0.00020797 -0.054289 -2.5203E-05 0.39369 0.00018276 464.240288097656 466.912009406357 95.339 0.96236 95.339 94.803 95.766 -7.6294E-06 366 84 7 0 0 0 9.1513E-05 2 53246 87.831 72.286 1 2.0049 2.5178 0 55459000 19111000 36348000 6109 117 3131 3491 9991;9992 9991 THNLEPYFESFINNLR 16 0 1 Unmodified _THNLEPYFESFINNLR_ 0 0 0 0 H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRG2 H6VRG3;H6VRG2 H6VRG2 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 665.3312 3 665.330402 1992.96938 NaN NaN NaN 0.072794 4.8432E-05 NaN NaN NaN NaN 134.3 0.13904 134.3 134.23 134.37 0 0 0 0 0.012987 1 86628 42.382 31.747 1 NaN NaN 0 5261900 5261900 0 + 6110 876;877 3132 3492 9993 9993 THQPSDEVGTSIEHPR 16 0 1 Unmodified _THQPSDEVGTSIEHPR_ 0 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 597.6221 3 597.286973 1788.83909 79070.84 0.29168 0.00017422 -0.24544 -0.0001466 0.046241 2.7619E-05 597.286822155874 600.622787084176 92.108 0.8931 92.108 91.599 92.492 0 315 78 6 0 0 0 1.2696E-06 2 51211 73.983 67.952 1 0.27921 0.35231 0 69943000 53004000 16938000 6111 1175 3133 3493 9994;9995 9995 THQPSDEVGTSIEHPR 16 0 1 Unmodified _THQPSDEVGTSIEHPR_ 0 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 597.2884 3 597.286973 1788.83909 NaN NaN NaN -0.11187 -6.6821E-05 NaN NaN NaN NaN 91.695 0.58578 91.695 91.253 91.839 0 0 0 0 2.5665E-07 1 50625 83.751 71.368 1 NaN NaN 0 19037000 19037000 0 6112 1175 3133 3493 9996 9996 THQPSDEVGTSIEHPR 16 0 1 Unmodified _THQPSDEVGTSIEHPR_ 0 0 0 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 597.6217 3 597.286973 1788.83909 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.347 1 89.347 88.847 89.847 0 0 0 0 0.0079133 1 48938 43.37 25.453 1 6113 1175 3133 3493 9997 9997 THSDVSSEQQHLK 13 1 0 Unmodified _THSDVSSEQQHLK_ 0 0 0 0 F5ATB8;E5KQF5;H6V745;F1D8N4;B6ZGU6;E5KQF6;P04150 F5ATB8 F5ATB8 NR3C1 Glucocorticoid receptor MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 501.9143 3 499.242705 1494.70628 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.223 1 73.223 72.723 73.723 0 0 0 0 0.0078283 1 37253 48.532 35.105 1 6114 698 3134 3494 9998 9998 THTDTESEASILGDSGEYK 19 1 0 Unmodified _THTDTESEASILGDSGEYK_ 0 0 0 0 Q96ME4;J3KQ48;Q9Y3E5 Q96ME4 Q96ME4 PTRH2 Peptidyl-tRNA hydrolase 2, mitochondrial MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 680.6393 3 680.639518 2038.89672 76183.16 0.59004 0.00040161 -0.90341 -0.0006149 -0.31337 -0.00021329 680.972928889964 683.310742708822 98.571 0.46207 98.571 98.316 98.778 0 81 36 4 0 0 0 1.3385E-07 1 56124 61.477 56.268 1 0.63565 0.76385 0 15454000 9989000 5465000 6115 891 3135 3495 9999 9999 THTDTESEASILGDSGEYK 19 1 0 Unmodified _THTDTESEASILGDSGEYK_ 0 0 0 0 Q96ME4;J3KQ48;Q9Y3E5 Q96ME4 Q96ME4 PTRH2 Peptidyl-tRNA hydrolase 2, mitochondrial MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 680.6385 3 680.639518 2038.89672 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.127 1 98.127 97.627 98.627 -7.6294E-06 0 0 0 0.017261 1 55680 24.893 17.181 1 6116 891 3135 3495 10000 10000 THTTALAGRSPSPASGR 17 0 2 2 Phospho (STY) _THTTALAGRS(ph)PS(ph)PASGR_ T(0.001)HT(0.007)T(0.141)ALAGRS(0.915)PS(0.828)PAS(0.109)GR T(-33.52)HT(-23.98)T(-10.06)ALAGRS(11.23)PS(9.45)PAS(-9.45)GR 0 0 2 1 A0A140VK53;Q9UQ35;I3L4D8;I3L182;Q9UQ39;A0A087X1W1;I3L1I8 A0A140VK53 A0A140VK53 SRRM2 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 609.6041 3 609.603057 1825.78734 76936.22 0.53988 0.00032911 -0.036397 -2.2188E-05 0.50348 0.00030692 609.603129187303 616.275288892232 57.441 1.5147 57.441 57 58.515 0 777 122 10 0 0 0 3.3181E-05 1 25003 53.553 53.553 15 0.82231 1.0295 0 394510000 216160000 178350000 6117 383 3136 3496 10001 10001 643;644 THTTALAGRSPSPASGR 17 0 2 2 Phospho (STY) _THTTALAGRS(ph)PS(ph)PASGR_ THTTALAGRS(1)PS(0.994)PAS(0.006)GR T(-74.63)HT(-54.78)T(-40.29)ALAGRS(40.29)PS(22.09)PAS(-22.09)GR 0 0 2 1 A0A140VK53;Q9UQ35;I3L4D8;I3L182;Q9UQ39;A0A087X1W1;I3L1I8 A0A140VK53 A0A140VK53 SRRM2 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 609.6031 3 609.603057 1825.78734 75982.29 0.24521 0.00014948 0.31232 0.00019039 0.55753 0.00033987 609.603477940441 616.275427847278 22.656 0.93628 22.656 22.345 23.282 0 351 48 11 0 0 0 8.7336E-13 1 9139 98.3 90.767 15 0.53996 0.47337 0 456810000 291690000 165110000 6118 383 3136 3496 10002 10002 643;644 THTTALAGRSPSPASGRR 18 0 3 2 Phospho (STY) _THTTALAGRS(ph)PS(ph)PASGRR_ THT(0.001)T(0.005)ALAGRS(0.973)PS(0.607)PAS(0.414)GRR T(-47.97)HT(-32.75)T(-22.91)ALAGRS(14.4)PS(1.74)PAS(-1.74)GRR 0 0 2 2 A0A140VK53;Q9UQ35;I3L4D8;I3L182;Q9UQ39;A0A087X1W1;I3L1I8 A0A140VK53 A0A140VK53 SRRM2 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 661.6376 3 661.63676 1981.88845 73926.63 0.74727 0.00049442 0.29352 0.0001942 1.0408 0.00068863 661.637039864188 671.645268446479 65.482 0.28842 65.482 65.339 65.627 0 97 21 6 0 0 0 1.9746E-06 2 31505 59.539 55.418 15 0.88956 1.0341 0 46742000 23174000 23568000 6119 383 3137 3497 10003;10004 10003 643;644 THTTALAGRSPSPASGRR 18 0 3 2 Phospho (STY) _THTTALAGRS(ph)PS(ph)PASGRR_ THTTALAGRS(0.999)PS(0.99)PAS(0.01)GRR T(-91.07)HT(-62.89)T(-57.2)ALAGRS(32.47)PS(20.13)PAS(-20.13)GRR 0 0 2 2 A0A140VK53;Q9UQ35;I3L4D8;I3L182;Q9UQ39;A0A087X1W1;I3L1I8 A0A140VK53 A0A140VK53 SRRM2 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 661.6369 3 661.63676 1981.88845 75244.13 0.96174 0.00063632 0.088466 5.8533E-05 1.0502 0.00069485 661.636806713711 671.645205424314 18.104 0.70984 18.104 17.923 18.632 0 124 31 7 0 0 0 1.1136E-31 1 5258 123.06 106.57 15 0.53901 0.61978 0 95874000 60013000 35860000 6120 383 3137 3497 10005 10005 643;644 TIAHSPTSFTESSSK 15 1 0 2 Phospho (STY) _TIAHS(ph)PT(ph)SFTESSSK_ TIAHS(1)PT(0.616)S(0.319)FT(0.054)ES(0.009)S(0.001)SK T(-55.9)IAHS(41.45)PT(2.85)S(-2.85)FT(-10.59)ES(-18.21)S(-26.48)S(-35.92)K 0 0 2 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 870.3492 2 870.34989 1738.68523 66145.84 0.67866 0.00059068 -0.1078 -9.3827E-05 0.57086 0.00049685 870.349758339379 874.356962590544 65.342 1.0498 65.342 64.893 65.943 0 373 77 7 0 0 0 1.3229E-08 3 31172 95.428 85.12 28 0.5913 0.73998 0 62628000 39100000 23528000 6121 1034 3138 3498 10006;10007;10008 10006 1907;1908;2912 TIAHSPTSFTESSSK 15 1 0 2 Phospho (STY) _TIAHS(ph)PTS(ph)FTESSSK_ TIAHS(0.998)PT(0.22)S(0.751)FT(0.026)ES(0.002)S(0.002)S(0.001)K T(-36.6)IAHS(27.47)PT(-5.34)S(5.34)FT(-14.63)ES(-27.05)S(-26.34)S(-27.05)K 0 0 2 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 874.3572 2 870.34989 1738.68523 65123.17 0.84212 0.00073294 -0.068271 -5.9419E-05 0.77385 0.00067352 870.851140327431 874.356959224429 61.812 1.7085 61.812 61.024 62.732 -3.8147E-06 855 158 7 0 0 0 0.00012744 1 38032 71.781 61.051 28 1.5264 1.0154 0 92116000 28643000 63473000 6122 1034 3138 3498 10009 10009 1907;1908;2912 TIAHSPTSFTESSSK 15 1 0 Phospho (STY) _TIAHS(ph)PTSFTESSSK_ TIAHS(0.99)PT(0.006)S(0.002)FT(0.001)ESSSK T(-57.92)IAHS(21.98)PT(-21.98)S(-26.34)FT(-32.05)ES(-39)S(-37.72)S(-37.72)K 0 0 1 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 830.3676 2 830.366725 1658.7189 67322.27 0.94877 0.00078783 0.45139 0.00037482 1.4002 0.0011627 830.367121629864 834.374149660057 44.85 3.481 44.85 43.285 46.766 0 2033 321 9 0 0 0 1.9593E-06 6 27022 86.548 86.548 8 2.1418 1.4314 0 174360000 55129000 119230000 6123 1034 3138 3499 10010;10011;10012;10013;10014;10015 10013 1907;1908;2912 TIAHSPTSFTESSSK 15 1 0 Phospho (STY) _TIAHS(ph)PTSFTESSSK_ T(0.002)IAHS(0.734)PT(0.218)S(0.043)FT(0.003)ESSSK T(-25.82)IAHS(5.28)PT(-5.28)S(-12.31)FT(-24.27)ES(-35.09)S(-34.62)S(-34.14)K 0 0 1 0 Q03164 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 553.9139 3 553.913575 1658.7189 80723.54 0.76079 0.00042141 0.014818 8.2078E-06 0.7756 0.00042962 553.913579748922 556.584974202698 44.935 3.1485 44.935 43.468 46.616 0 1402 292 7 0 0 0 0.00056344 3 26972 49.865 44.882 8 2.1429 1.4018 0 48499000 15128000 33371000 6124 1034 3138 3499 10016;10017;10018 10017 1907;1908;2912 TICTFDSSGFESMSPIK 17 1 0 Oxidation (M),Phospho (STY) _TICTFDSSGFESM(ox)S(ph)PIK_ TICTFDSSGFESM(1)SPIK TICTFDSSGFES(0.163)MS(0.836)PIK TICTFDSSGFESM(77.18)SPIK T(-75.28)ICT(-60.65)FDS(-40.88)S(-33.64)GFES(-7.1)MS(7.1)PIK 0 1 1 0 E9PEI0;Q69YH5;A8K8Z0;B3KRS8 E9PEI0 E9PEI0 CDCA2 Cell division cycle-associated protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1006.4205 2 1001.91232 2001.8101 60479.65 1.1485 0.0011507 0.090127 9.0299E-05 1.2386 0.001241 1002.41416684198 1005.91954509517 102.03 1.0531 102.03 101.57 102.62 0 550 85 9 0 0 0 8.1096E-07 4 58970 77.185 63.505 6 0.69512 0.88197 0 38128000 23471000 14658000 6125 799 3139 3500 10019;10020;10021;10022 10021 218 1377 TIEESEETLK 10 1 0 Unmodified _TIEESEETLK_ 0 0 0 0 B7ZLZ7;A0A024R158;O95347;Q05BV1;A8K984;B3KMB1;B3KM27 B7ZLZ7 B7ZLZ7 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 593.8 2 589.792983 1177.57141 NaN NaN NaN -0.13994 -8.2533E-05 NaN NaN NaN NaN 60.035 0.48433 60.035 59.822 60.306 3.8147E-06 0 0 0 0.022913 1 27061 51.066 9.4139 1 NaN NaN 0 3491800 0 3491800 6126 39 3140 3501 10023 10023 TIEESEETLK 10 1 0 Unmodified _TIEESEETLK_ 0 0 0 0 B7ZLZ7;A0A024R158;O95347;Q05BV1;A8K984;B3KMB1;B3KM27 B7ZLZ7 B7ZLZ7 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 589.7633 2 589.792983 1177.57141 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.923 1 59.923 59.423 60.423 0 0 0 0 0.010238 1 27052 52.716 6.9982 1 6127 39 3140 3501 10024 10024 TIEESEETLK 10 1 0 Unmodified _TIEESEETLK_ 0 0 0 0 B7ZLZ7;A0A024R158;O95347;Q05BV1;A8K984;B3KMB1;B3KM27 B7ZLZ7 B7ZLZ7 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 589.7931 2 589.792983 1177.57141 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.994 1 59.994 59.494 60.494 -3.8147E-06 0 0 0 0.0036573 1 27113 66.621 19.554 1 6128 39 3140 3501 10025 10025 TIEQNINNLNVSEADRK 17 1 1 Unmodified _TIEQNINNLNVSEADRK_ 0 0 0 1 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 653.3198 3 653.336104 1956.98648 77199.54 0.73752 0.00048185 0.10377 6.7795E-05 0.84129 0.00054964 653.670511029072 659.343657344721 88.122 0.79051 88.122 87.793 88.583 0 175 71 6 0 0 0 2.2184E-05 3 48127 56.121 32.617 1 1.0292 1.1972 0 30694000 12507000 18187000 6129 464 3141 3502 10026;10027;10028 10028 TIETSPSLSR 10 0 1 Phospho (STY) _TIETS(ph)PSLSR_ TIET(0.112)S(0.774)PS(0.112)LS(0.003)R T(-65.31)IET(-8.41)S(8.41)PS(-8.41)LS(-24.43)R 0 0 1 0 H3BP78;F8W7R3;B3KNW8;B7ZMF2;Q9NVI1 H3BP78 H3BP78 FANCI Fanconi anemia group I protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 585.7739 2 585.773743 1169.53293 79155.89 0.79342 0.00046477 -0.27846 -0.00016311 0.51497 0.00030165 585.773666050779 590.777783668483 56.723 1.2586 56.723 56.052 57.31 0 449 106 6 0 0 0 0.0012607 4 24872 78.903 54.748 5 0.76459 0.96003 0 42108000 23356000 18751000 6130 589 3142 3503 10029;10030;10031;10032 10031 971 TIETSPSLSR 10 0 1 Phospho (STY) _TIETS(ph)PSLSR_ TIET(0.002)S(0.691)PS(0.23)LS(0.077)R T(-84.16)IET(-24.58)S(4.78)PS(-4.78)LS(-9.54)R 0 0 1 0 H3BP78;F8W7R3;B3KNW8;B7ZMF2;Q9NVI1 H3BP78 H3BP78 FANCI Fanconi anemia group I protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 590.7786 2 585.773743 1169.53293 79058.67 0.78264 0.00045845 -0.34397 -0.00020149 0.43867 0.00025696 585.773865438621 590.778005880068 49.389 1.5873 49.389 48.843 50.43 0 638 153 6 0 0 0 3.6222E-05 2 29758 91.961 67.806 5 0.99631 0.69 0 41502000 21271000 20232000 6131 589 3142 3503 10033;10034 10034 971 TIGGGDDSFNTFFSETGAGK 20 1 0 Phospho (STY) _TIGGGDDS(ph)FNTFFSETGAGK_ TIGGGDDS(0.989)FNT(0.011)FFSETGAGK T(-34.05)IGGGDDS(19.64)FNT(-19.64)FFS(-46.39)ET(-60.15)GAGK 0 0 1 0 B3KT06;B3KPS3;Q53GA7;A8JZY9;F5H5D3;B7Z1K5;Q9BQE3;Q71U36;P68363;B4DN58;F8VQQ4;F8VVB9;Q1ZYQ1;Q13748;F8VRK0;F8VX09;F8VWV9;F8VRZ4;F8VS66;Q8N532;Q6PEY2;F8VXZ7;F8W0F6 B3KT06 B3KT06 TUBA1C;TUBA1A;TUBA1B;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1048.4432 2 1044.43332 2086.8521 60083.83 0.81349 0.00084964 -0.0093097 -9.7234E-06 0.80418 0.00083991 1044.93464154853 1048.44027142268 118.16 1.3919 118.16 117.44 118.83 7.6294E-06 946 121 12 0 0 0 1.0292E-28 3 70573 114.52 94.315 5 1.0616 1.3119 0 442310000 210430000 231880000 6132 437 3143 3504 10035;10036;10037 10035 760 TIGGGDDSFNTFFSETGAGK 20 1 0 Phospho (STY) _TIGGGDDS(ph)FNTFFSETGAGK_ T(0.102)IGGGDDS(0.781)FNT(0.116)FFS(0.001)ETGAGK T(-8.84)IGGGDDS(8.29)FNT(-8.29)FFS(-29.34)ET(-35.24)GAGK 0 0 1 0 B3KT06;B3KPS3;Q53GA7;A8JZY9;F5H5D3;B7Z1K5;Q9BQE3;Q71U36;P68363;B4DN58;F8VQQ4;F8VVB9;Q1ZYQ1;Q13748;F8VRK0;F8VX09;F8VWV9;F8VRZ4;F8VS66;Q8N532;Q6PEY2;F8VXZ7;F8W0F6 B3KT06 B3KT06 TUBA1C;TUBA1A;TUBA1B;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1044.4349 2 1044.43332 2086.8521 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.87 1 118.87 118.37 119.37 0 0 0 0 0.00092692 1 71401 49.929 36.729 5 6133 437 3143 3504 10038 10038 760 TIGGGDDSFNTFFSETGAGK 20 1 0 Phospho (STY) _TIGGGDDS(ph)FNTFFSETGAGK_ T(0.103)IGGGDDS(0.878)FNT(0.019)FFSETGAGK T(-9.32)IGGGDDS(9.32)FNT(-16.58)FFS(-43.15)ET(-50.38)GAGK 0 0 1 0 B3KT06;B3KPS3;Q53GA7;A8JZY9;F5H5D3;B7Z1K5;Q9BQE3;Q71U36;P68363;B4DN58;F8VQQ4;F8VVB9;Q1ZYQ1;Q13748;F8VRK0;F8VX09;F8VWV9;F8VRZ4;F8VS66;Q8N532;Q6PEY2;F8VXZ7;F8W0F6 B3KT06 B3KT06 TUBA1C;TUBA1A;TUBA1B;TUBA2;TUBA3C;TUBA3E Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1044.9369 2 1044.43332 2086.8521 59645.12 0.60198 0.00062872 0.5249 0.00054822 1.1269 0.0011769 1044.93548625785 1048.44087159869 125.92 1.2727 125.92 125.4 126.67 0 895 116 12 0 0 0 2.6128E-08 2 81339 65.805 55.884 5 1.0222 0.68267 0 277680000 137740000 139940000 6134 437 3143 3504 10039;10040 10040 760 TIGGGDDSFTTFFCETGAGK 20 1 0 Phospho (STY) _TIGGGDDS(ph)FTTFFCETGAGK_ T(0.061)IGGGDDS(0.813)FT(0.11)T(0.016)FFCETGAGK T(-11.27)IGGGDDS(8.69)FT(-8.69)T(-17.11)FFCET(-46.76)GAGK 0 0 1 0 P68366;C9JDL2;C9JEV8;C9JQ00;C9JJQ8 P68366 P68366 TUBA4A Tubulin alpha-4A chain MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1078.4464 2 1074.43501 2146.85547 59274.25 0.30625 0.00032905 -1.0837 -0.0011644 -0.77749 -0.00083536 1074.93504367192 1078.94258043809 122.73 0.69692 122.73 122.4 123.1 0 274 55 7 0 0 0 2.5779E-07 1 74039 59.898 45.641 5 1.5235 1.8632 0 19599000 8613200 10986000 6135 1024 3144 3505 10041 10041 1851 TISPAESTALLQGR 14 0 1 Phospho (STY) _TIS(ph)PAESTALLQGR_ TIS(1)PAESTALLQGR T(-52.49)IS(52.49)PAES(-70.61)T(-85.81)ALLQGR 0 0 1 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 762.3774 2 762.376895 1522.73924 69766.28 1.4661 0.0011177 -0.21117 -0.00016099 1.2549 0.00095674 762.376697436576 767.380901881321 101.41 1.5151 101.41 100.73 102.25 7.6294E-06 717 123 9 0 0 0 2.8152E-41 4 58436 153.81 130.13 4 0.51364 0.64949 0 228290000 150260000 78032000 6136 1035 3145 3506 10042;10043;10044;10045 10044 1925 TISPAESTALLQGR 14 0 1 Phospho (STY) _TIS(ph)PAESTALLQGR_ T(0.027)IS(0.972)PAES(0.001)TALLQGR T(-15.64)IS(15.64)PAES(-29.86)T(-35.02)ALLQGR 0 0 1 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 767.3821 2 762.376895 1522.73924 69618.94 1.2192 0.00092949 -0.11716 -8.9317E-05 1.102 0.00084017 762.376889770124 767.380875576244 107.44 1.5993 107.44 106.87 108.47 0 1095 154 10 0 0 0 0.0026061 2 68847 60.255 47.488 4 0.92349 0.60976 0 242840000 127430000 115410000 6137 1035 3145 3506 10046;10047 10046 1925 TITLEVEPSDTIENVK 16 1 0 Unmodified _TITLEVEPSDTIENVK_ 0 0 0 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q9UFQ0;Q96C32;Q96MH4;L8B4I8;L8B196;Q96H31;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;Q66K58;Q59EM9;P62987;P0CG47;P0CG48;M0R1V7;Q49A90;J3QSA3;F5GZ39 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;DKFZp434K0435;UbC Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 894.9699 2 894.467289 1786.92002 65574.98 1.0144 0.00090731 -0.10767 -9.6307E-05 0.90669 0.000811 894.466967911511 898.474250331719 108.31 0.70566 108.31 107.98 108.68 7.6294E-06 230 54 8 0 0 0 6.0491E-36 1 63278 130.56 130.56 1 0.89653 1.1148 0 84732000 42536000 42195000 6138 558 3146 3507 10048 10048 TITVPVSGSPK 11 1 0 Phospho (STY) _TITVPVS(ph)GSPK_ TIT(0.001)VPVS(0.83)GS(0.168)PK T(-51.19)IT(-28.35)VPVS(6.93)GS(-6.93)PK 0 0 1 0 E9PMC9;B3KWI5;Q7Z589;B4E1Z2 E9PMC9 E9PMC9 C11orf30;EMSY Protein EMSY MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 583.2975 2 583.296854 1164.57916 80304.27 0.84086 0.00049047 0.19996 0.00011664 1.0408 0.00060711 583.296963241701 587.303809544009 75.958 0.99355 75.958 75.458 76.452 -7.6294E-06 353 86 5 0 0 0 0.00077616 1 39031 81.92 61.713 4 0.56466 0.7103 0 52471000 32295000 20175000 6139 607 3147 3508 10049 10049 1004 TITVPVSGSPK 11 1 0 Phospho (STY) _TITVPVS(ph)GSPK_ TITVPVS(0.665)GS(0.335)PK T(-65.43)IT(-33.68)VPVS(2.98)GS(-2.98)PK 0 0 1 0 E9PMC9;B3KWI5;Q7Z589;B4E1Z2 E9PMC9 E9PMC9 C11orf30;EMSY Protein EMSY MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 587.3047 2 583.296854 1164.57916 80049.11 0.84789 0.00049457 0.11696 6.8222E-05 0.96485 0.0005628 583.296926245466 587.303931327852 75.167 1.4812 75.167 74.526 76.007 -7.6294E-06 517 130 6 0 0 0 0.00083791 2 48041 81.525 61.918 4 1.2723 0.82688 0 37744000 16203000 21540000 6140 607 3147 3508 10050;10051 10051 1004 TIYSGEENMDITK 13 1 0 Oxidation (M),Phospho (STY) _TIYSGEENM(ox)DIT(ph)K_ TIYSGEENM(1)DITK TIYSGEENMDIT(1)K TIYSGEENM(94.72)DITK T(-94.72)IY(-77.28)S(-59.51)GEENMDIT(59.51)K 0 1 1 0 E9PPJ1;Q8NG31 E9PPJ1 E9PPJ1 CASC5 Protein CASC5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 802.8357 2 798.828586 1595.64262 68131.19 0.95951 0.00076648 -0.82215 -0.00065676 0.13736 0.00010973 798.828324442247 802.835201292801 60.204 1.1 60.204 59.761 60.861 3.8147E-06 380 77 7 0 0 0 2.3445E-06 2 27143 94.717 84.193 4 0.90453 1.1374 0 53015000 23836000 29179000 6141 814 3148 3509 10052;10053 10053 221 2832 TKDCNVISSK 10 2 0 Unmodified _TKDCNVISSK_ 0 0 0 1 Q6N082;H7C1J4;B2RNT9;Q6BDS2 Q6N082 Q6N082 DKFZp686F10110;UHRF1BP1 UHRF1-binding protein 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 576.2882 2 576.289888 1150.56522 NaN NaN NaN NaN NaN NaN NaN NaN NaN 56.792 1 56.792 56.292 57.292 0 0 0 0 0.0030265 1 24739 75.043 1.3787 1 6142 561 3149 3510 10054 10054 TKPTQAAGPSSPQKPPTPEETK 22 3 0 2 Phospho (STY) _TKPTQAAGPSS(ph)PQKPPT(ph)PEETK_ TKPTQAAGPS(0.457)S(0.543)PQKPPT(0.995)PEET(0.005)K T(-62.89)KPT(-50.29)QAAGPS(-0.74)S(0.74)PQKPPT(23.3)PEET(-23.3)K 0 0 2 2 F5H8D7;B4DTD3;B2RCY5;A0A024R0S8;Q59HH7;P18887 F5H8D7 F5H8D7 XRCC1 DNA repair protein XRCC1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 821.0539 3 813.039777 2436.0975 67316.19 0.5941 0.00048302 0.17523 0.00014247 0.76933 0.0006255 813.374176245976 821.054159562663 51.301 2.2516 51.301 50.695 52.947 0 1520 178 11 0 0 0 1.1832E-36 3 21364 115.54 115.54 15 0.54737 0.69326 0 206740000 131180000 75558000 6143 33 3150 3511 10055;10056;10057 10057 41;42;2616 TKPTQAAGPSSPQKPPTPEETK 22 3 0 Phospho (STY) _TKPTQAAGPS(ph)SPQKPPTPEETK_ T(0.004)KPT(0.037)QAAGPS(0.474)S(0.474)PQKPPT(0.008)PEET(0.004)K T(-20.73)KPT(-11.08)QAAGPS(0)S(0)PQKPPT(-17.7)PEET(-20.85)K 0 0 1 2 F5H8D7;B4DTD3;B2RCY5;A0A024R0S8;Q59HH7;P18887 F5H8D7 F5H8D7 XRCC1 DNA repair protein XRCC1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 787.0535 3 786.384333 2356.13117 68546.01 1.0019 0.00078786 0.1058 8.3199E-05 1.1077 0.00087106 786.718743374669 794.398499081192 60.569 0.53678 60.569 60.368 60.904 0 260 37 12 0 0 0 6.6478E-06 1 27544 42.973 34.479 6 0.3978 0.50382 0 184270000 129280000 54989000 6144 33 3150 3512 10058 10058 41;42;2616 TKPTQAAGPSSPQKPPTPEETK 22 3 0 Phospho (STY) _TKPTQAAGPSS(ph)PQKPPTPEETK_ TKPTQAAGPS(0.065)S(0.91)PQKPPT(0.021)PEET(0.004)K T(-46.98)KPT(-40.02)QAAGPS(-11.43)S(11.43)PQKPPT(-16.37)PEET(-23.63)K 0 0 1 2 F5H8D7;B4DTD3;B2RCY5;A0A024R0S8;Q59HH7;P18887 F5H8D7 F5H8D7 XRCC1 DNA repair protein XRCC1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 590.0405 4 590.040069 2356.13117 78678.31 0.79958 0.00047178 0.38616 0.00022785 1.1857 0.00069963 590.291004828648 596.050900501279 60.574 0.41585 60.574 60.402 60.817 0 170 29 10 0 0 0 6.2787E-13 2 27587 66.027 57.533 6 0.386 0.48888 0 60030000 42571000 17459000 6145 33 3150 3512 10059;10060 10059 41;42;2616 TLAPSPKSPGDFTSAAQLASTPFHK 25 2 0 2 Phospho (STY) _TLAPS(ph)PKS(ph)PGDFTSAAQLASTPFHK_ T(0.008)LAPS(0.498)PKS(0.498)PGDFT(0.498)S(0.498)AAQLAS(0.001)TPFHK T(-19.43)LAPS(0)PKS(0)PGDFT(0)S(0)AAQLAS(-29.85)T(-34.41)PFHK 0 0 2 1 O43683;A0JLU2 O43683 O43683 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 906.4194 3 906.085497 2715.23466 64763.43 0.82437 0.00074695 -0.43826 -0.0003971 0.38611 0.00034985 906.419309363914 911.762160369484 115.86 0.69707 115.86 115.51 116.21 7.6294E-06 270 61 8 0 0 0 3.5758E-07 2 69327 44.258 44.258 21 0.63788 0.75736 0 25562000 13865000 11698000 6146 926 3151 3513 10061;10062 10062 1557;1558;1559;2844 TLAVSGLGVVGR 12 0 1 Unmodified _TLAVSGLGVVGR_ 0 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 569.8446 2 564.840405 1127.66626 NaN NaN NaN -0.010205 -5.7639E-06 NaN NaN NaN NaN 100.54 0.3868 100.54 100.33 100.71 7.6294E-06 0 0 0 0.008955 1 64550 52.579 35.193 1 NaN NaN 0 2788300 0 2788300 6147 962 3152 3514 10063 10063 TLAVSGLGVVGR 12 0 1 Unmodified _TLAVSGLGVVGR_ 0 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 564.8407 2 564.840405 1127.66626 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.53 1 100.53 100.03 101.03 0 0 0 0 0.00076525 1 64645 61.161 43.776 1 6148 962 3152 3514 10064 10064 TLCGTPNYIAPEVLSK 16 1 0 Phospho (STY) _T(ph)LCGTPNYIAPEVLSK_ T(0.948)LCGT(0.052)PNYIAPEVLSK T(12.64)LCGT(-12.64)PNY(-42.63)IAPEVLS(-63.62)K 0 0 1 0 B4E083;Q59GD0;B2R841;P53350 B4E083 B4E083 PLK1 Serine/threonine-protein kinase PLK;Serine/threonine-protein kinase PLK1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 922.4409 2 921.939002 1841.86345 63054.43 0.4584 0.00042262 0.44539 0.00041062 0.90378 0.00083323 921.939342656224 925.946477965987 114.11 0.67616 114.11 113.76 114.44 -7.6294E-06 354 59 8 0 0 0 5.3598E-05 3 67749 72.315 63.615 4 0.70989 0.88811 0 63342000 34961000 28381000 6149 540 3153 3515 10065;10066;10067 10067 2757 TLDSGTSEIVKSPR 14 1 1 Phospho (STY) _TLDSGTSEIVKS(ph)PR_ TLDS(0.003)GT(0.003)S(0.053)EIVKS(0.94)PR T(-36.61)LDS(-24.47)GT(-24.47)S(-12.47)EIVKS(12.47)PR 0 0 1 1 Q9H501;Q8IWH6;Q05C10;A0JLU5 Q9H501 Q9H501 ESF1 ESF1 homolog ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 794.3912 2 785.379635 1568.74472 NaN NaN NaN -0.58083 -0.00045617 NaN NaN NaN NaN 66.768 0.53591 66.768 66.455 66.991 0 0 0 0 0.011331 1 32427 45.207 30.52 5 NaN NaN 0 6061400 0 6061400 6150 1206 3154 3516 10068 10068 2407;2985 TLDSGTSEIVKSPR 14 1 1 Phospho (STY) _TLDSGTSEIVKS(ph)PR_ TLDSGTSEIVKS(0.999)PR T(-69.49)LDS(-45.34)GT(-39.31)S(-33.1)EIVKS(33.1)PR 0 0 1 1 Q9H501;Q8IWH6;Q05C10;A0JLU5 Q9H501 Q9H501 ESF1 ESF1 homolog MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 785.3798 2 785.379635 1568.74472 NaN NaN NaN NaN NaN NaN NaN NaN NaN 66.566 1 66.566 66.066 67.066 0 0 0 0 1.9332E-05 1 32454 81.632 66.002 5 6151 1206 3154 3516 10069 10069 2407;2985 TLDSGTSEIVKSPR 14 1 1 Phospho (STY) _TLDSGTSEIVKS(ph)PR_ TLDSGTSEIVKS(0.999)PR T(-64.79)LDS(-35.95)GT(-33.62)S(-34.51)EIVKS(33.62)PR 0 0 1 1 Q9H501;Q8IWH6;Q05C10;A0JLU5 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 529.9297 3 523.922182 1568.74472 82849.49 0.97467 0.00051065 -0.23794 -0.00012466 0.73673 0.00038599 523.922115383484 529.92965639237 52.264 2.1824 52.264 51.085 53.268 0 973 196 8 0 0 0 0.00039843 3 32019 69.256 62.217 5 1.1123 0.8575 0 45005000 19640000 25364000 6152 1206 3154 3516 10070;10071;10072 10072 2407;2985 TLDSGTSEIVKSPR 14 1 1 Phospho (STY) _TLDSGTSEIVKS(ph)PR_ TLDSGTSEIVKS(1)PR T(-167.06)LDS(-118.72)GT(-89.97)S(-80.37)EIVKS(80.37)PR 0 0 1 1 Q9H501;Q8IWH6;Q05C10;A0JLU5 Q9H501 Q9H501 ESF1 ESF1 homolog MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 794.3915 2 785.379635 1568.74472 68505.96 1.221 0.00095896 0.30543 0.00023987 1.5264 0.0011988 785.379627267042 794.391353611299 52.138 2.6011 52.138 51.046 53.647 0 1194 228 8 0 0 0 1.4158E-139 4 31542 218.12 184.85 5 1.0816 0.83461 0 77943000 40047000 37896000 6153 1206 3154 3516 10073;10074;10075;10076 10074 2407;2985 TLDSGTSEIVKSPR 14 1 1 2 Phospho (STY) _T(ph)LDSGTSEIVKS(ph)PR_ T(0.964)LDS(0.03)GT(0.006)S(0.003)EIVKS(0.997)PR T(15.13)LDS(-15.13)GT(-22.64)S(-27.58)EIVKS(27.58)PR 0 0 2 1 Q9H501;Q8IWH6;Q05C10;A0JLU5 Q9H501 Q9H501 ESF1 ESF1 homolog MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 556.5859 3 550.577626 1648.71105 NaN NaN NaN NaN NaN NaN NaN NaN NaN 52.301 1 52.301 51.801 52.801 -3.8147E-06 0 0 0 4.7982E-06 1 31748 62.735 42.629 10 6154 1206 3154 3517 10077 10077 2407;2985 TLEGELHDLR 10 0 1 Unmodified _TLEGELHDLR_ 0 0 0 0 P02545;W8QEH3;Q5TCI8;Q5I6Y5;Q3BDU5;Q8N519;H0YAB0 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 398.2112 3 394.875293 1181.60405 103582.2 -0.031939 -1.2612E-05 0.19359 7.6444E-05 0.16165 6.3832E-05 394.87541953 398.211419840772 105.1 0.87972 105.1 104.68 105.56 0 133 60 4 0 0 0 0.0055758 1 60939 49.35 36.395 1 1.0745 1.1754 0 6018100 2866300 3151800 6155 954 3155 3518 10078 10078 TLHCEGTEINSDDEQESK 18 1 0 Phospho (STY) _TLHCEGTEINS(ph)DDEQESK_ TLHCEGTEINS(1)DDEQESK T(-162)LHCEGT(-79.89)EINS(67.32)DDEQES(-67.32)K 0 0 1 0 Q6NUR1;Q9BPX3;H0Y9Z8 Q6NUR1 Q6NUR1 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1086.9275 2 1086.42537 2170.83619 58169.37 0.22274 0.00024199 0.0947 0.00010288 0.31744 0.00034487 1086.92694334496 1090.43266846679 55.111 1.4192 55.111 54.459 55.878 0 1035 113 12 0 0 0 7.2914E-174 3 23626 224.86 208.77 4 0.76921 0.95017 0 543780000 308810000 234970000 6156 1119 3156 3519 10079;10080;10081 10080 2125;2951 TLHCEGTEINSDDEQESK 18 1 0 Phospho (STY) _TLHCEGTEINS(ph)DDEQESK_ TLHCEGTEINS(1)DDEQESK T(-96.13)LHCEGT(-64.61)EINS(43.85)DDEQES(-43.85)K 0 0 1 0 Q6NUR1;Q9BPX3;H0Y9Z8 Q6NUR1 Q6NUR1 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 724.9548 3 724.619339 2170.83619 70161.81 0.64444 0.00046697 -0.217 -0.00015724 0.42744 0.00030973 724.953854966745 727.290679198112 55.182 1.7813 55.182 54.38 56.161 3.8147E-06 1212 142 12 0 0 0 1.0458E-38 5 23144 136.14 136.14 4 0.76881 0.94824 0 1091400000 614480000 476930000 6157 1119 3156 3519 10082;10083;10084;10085;10086 10082 2125;2951 TLHCEGTEINSDDEQESK 18 1 0 Phospho (STY) _TLHCEGTEINS(ph)DDEQESK_ TLHCEGT(0.097)EINS(0.902)DDEQESK T(-34.7)LHCEGT(-9.67)EINS(9.67)DDEQES(-45.52)K 0 0 1 0 Q6NUR1;Q9BPX3;H0Y9Z8 Q6NUR1 Q6NUR1 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 724.9547 3 724.619339 2170.83619 69203.1 0.75377 0.0005462 -0.1709 -0.00012384 0.58287 0.00042236 724.953775961815 727.290813956561 19.163 1.2019 19.163 18.771 19.973 1.9073E-06 418 55 13 0 0 0 2.0016E-11 2 6093 89.831 81.039 4 1.6554 1.1049 0 382940000 147580000 235360000 6158 1119 3156 3519 10087;10088 10087 2125;2951 TLHCEGTEINSDDEQESK 18 1 0 Phospho (STY) _TLHCEGT(ph)EINSDDEQESK_ T(0.004)LHCEGT(0.613)EINS(0.383)DDEQESK T(-22.03)LHCEGT(2.04)EINS(-2.04)DDEQES(-36.49)K 0 0 1 0 Q6NUR1;Q9BPX3;H0Y9Z8 Q6NUR1 Q6NUR1 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1086.9265 2 1086.42537 2170.83619 56706.78 0.43801 0.00047587 -0.17106 -0.00018584 0.26696 0.00029003 1086.926893582 1090.43252394532 19.162 0.95783 19.162 18.961 19.919 0 185 42 10 0 0 0 4.8727E-05 1 6122 58.159 58.159 4 1.6074 1.0515 0 48472000 19458000 29014000 6159 1119 3156 3519 10089 10089 2125;2951 TLHCEGTEINSDDEQESK 18 1 0 Phospho (STY) _TLHCEGTEINS(ph)DDEQESK_ TLHCEGTEINS(1)DDEQESK T(-110.79)LHCEGT(-73.31)EINS(45.98)DDEQES(-45.98)K 0 0 1 0 Q6NUR1;Q9BPX3;H0Y9Z8 Q6NUR1 Q6NUR1 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 724.62 3 724.619339 2170.83619 68435.68 0.63253 0.00045835 -2.0883 -0.0015132 -1.4557 -0.0010548 724.952052758774 727.62323805584 21.406 1.6198 21.406 20.777 22.396 0 546 78 13 0 0 0 3.6054E-45 2 8113 145.88 135.6 4 1.6751 1.1195 0 123130000 45488000 77645000 6160 1119 3156 3519 10090;10091 10091 2125;2951 TLHCEGTEINSDDEQESK 18 1 0 Phospho (STY) _TLHCEGTEINS(ph)DDEQESK_ TLHCEGTEINS(0.999)DDEQESK T(-46.7)LHCEGT(-43)EINS(33.21)DDEQES(-33.21)K 0 0 1 0 Q6NUR1;Q9BPX3;H0Y9Z8 Q6NUR1 Q6NUR1 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 724.9551 3 724.619339 2170.83619 70735.62 0.87793 0.00063617 0.12676 9.1854E-05 1.0047 0.00072802 724.953811268514 727.291206738187 26.982 1.0912 26.982 26.663 27.754 0 426 66 10 0 0 0 7.8737E-07 2 12999 69.133 64.606 4 1.6201 1.0627 0 52473000 21520000 30953000 6161 1119 3156 3519 10092;10093 10093 2125;2951 TLHCEGTEINSDDEQESK 18 1 0 Phospho (STY) _TLHCEGTEINS(ph)DDEQESK_ TLHCEGT(0.001)EINS(0.999)DDEQESK T(-86.84)LHCEGT(-31.41)EINS(31.41)DDEQES(-41.94)K 0 0 1 0 Q6NUR1;Q9BPX3;H0Y9Z8 Q6NUR1 Q6NUR1 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1090.4336 2 1086.42537 2170.83619 57179.02 0.56314 0.0006118 0.02848 3.0942E-05 0.59162 0.00064275 1086.42559284962 1090.432441242 26.979 0.66321 26.979 26.602 27.265 0 226 39 8 0 0 0 1.2519E-23 1 12969 116.06 102.23 4 1.4967 0.97681 0 44816000 18403000 26413000 6162 1119 3156 3519 10094 10094 2125;2951 TLHCEGTEINSDDEQESK 18 1 0 Phospho (STY) _TLHCEGTEINS(ph)DDEQESK_ TLHCEGTEINS(1)DDEQESK T(-160.5)LHCEGT(-87.26)EINS(66.6)DDEQES(-66.6)K 0 0 1 0 Q6NUR1;Q9BPX3;H0Y9Z8 Q6NUR1 Q6NUR1 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1086.9287 2 1086.42537 2170.83619 56627.29 0.55751 0.00060569 -0.53797 -0.00058446 0.01954 2.1228E-05 1086.9268629867 1090.43226474035 28.154 2.9166 28.154 27.509 30.425 0 1686 203 13 0 0 0 2.144E-102 6 14466 194.19 184.67 4 1.6852 1.1209 0 3164500000 1224300000 1940200000 6163 1119 3156 3519 10095;10096;10097;10098;10099;10100 10096 2125;2951 TLHCEGTEINSDDEQESK 18 1 0 Phospho (STY) _TLHCEGTEINS(ph)DDEQESK_ TLHCEGTEINS(1)DDEQESK T(-90.9)LHCEGT(-60.17)EINS(47.06)DDEQES(-47.06)K 0 0 1 0 Q6NUR1;Q9BPX3;H0Y9Z8 Q6NUR1 Q6NUR1 NCAPG Condensin complex subunit 3 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 727.6261 3 724.619339 2170.83619 NaN NaN NaN -1.3062 -0.00094647 NaN NaN NaN NaN 28.161 2.6474 28.161 27.72 30.368 0 0 0 0 5.0419E-41 3 13828 124.69 112.01 4 NaN NaN 0 2066300000 0 2066300000 6164 1119 3156 3519 10101;10102;10103 10101 2125;2951 TLHCEGTEINSDDEQESK 18 1 0 Phospho (STY) _TLHCEGTEINS(ph)DDEQESK_ TLHCEGTEINS(1)DDEQESK T(-96.13)LHCEGT(-68.89)EINS(50.89)DDEQES(-50.89)K 0 0 1 0 Q6NUR1;Q9BPX3;H0Y9Z8 Q6NUR1 Q6NUR1 NCAPG Condensin complex subunit 3 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 724.9549 3 724.619339 2170.83619 NaN NaN NaN 1.0825 0.00078443 NaN NaN NaN NaN 28.16 3.0156 28.16 27.564 30.58 0 0 0 0 8.0623E-53 3 13850 136.14 121.91 4 NaN NaN 0 1291400000 1291400000 0 6165 1119 3156 3519 10104;10105;10106 10104 2125;2951 TLHCEGTEINSDDEQESKEVEETATAK 27 2 0 Phospho (STY) _TLHCEGTEINS(ph)DDEQESKEVEETATAK_ TLHCEGT(0.069)EINS(0.889)DDEQES(0.025)KEVEET(0.008)AT(0.009)AK T(-36.4)LHCEGT(-11.11)EINS(11.11)DDEQES(-15.48)KEVEET(-20.63)AT(-19.79)AK 0 0 1 1 Q6NUR1;Q9BPX3;H0Y9Z8 Q6NUR1 Q6NUR1 NCAPG Condensin complex subunit 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1049.7843 3 1044.10625 3129.29693 59046.37 0.68847 0.00071883 0.023867 2.4919E-05 0.71233 0.00074375 1044.44075602587 1049.78340111417 67.928 1.4628 67.928 67.531 68.994 0 1215 130 15 0 0 0 1.973E-09 1 42386 46.898 40.487 6 1.6293 1.2001 0 318920000 112020000 206900000 6166 1119 3157 3520 10107 10107 2125;2951 TLHEVSLQESIR 12 0 1 Unmodified _TLHEVSLQESIR_ 0 0 0 0 Q05CW7 Q05CW7 Q05CW7 NAT10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 471.2558 3 471.256174 1410.74669 88291.81 1.0793 0.00050865 0.43386 0.00020446 1.5132 0.00071311 471.256187052341 474.592427502329 100.81 0.5884 100.81 100.63 101.22 0 217 43 8 0 0 0 6.0048E-07 2 57757 99.5 83.744 1 0.91145 1.1526 0 244170000 126940000 117230000 6167 1038 3158 3521 10108;10109 10108 TLHEVSLQESIR 12 0 1 Unmodified _TLHEVSLQESIR_ 0 0 0 0 Q05CW7 Q05CW7 Q05CW7 NAT10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 706.8842 2 706.380623 1410.74669 74498.41 1.7048 0.0012043 0.62615 0.0004423 2.331 0.0016466 706.882556693453 711.886153109525 100.8 0.22697 100.8 100.69 100.92 7.6294E-06 49 15 5 0 0 0 0.02778 1 57843 64.439 53.609 1 0.69729 0.83548 0 17319000 10067000 7251700 6168 1038 3158 3521 10110 10110 TLLDIDNTR 9 0 1 Unmodified _TLLDIDNTR_ 0 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 530.7859 2 530.785296 1059.55604 NaN NaN NaN -0.4079 -0.00021651 NaN NaN NaN NaN 80.171 0.48282 80.171 79.956 80.439 0 0 0 0 0.024873 1 51186 47.198 23.043 1 NaN NaN 0 4473800 4473800 0 + 6169 757 3159 3522 10111 10111 TLLDIDNTR 9 0 1 Unmodified _TLLDIDNTR_ 0 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 530.7849 2 530.785296 1059.55604 NaN NaN NaN -0.43421 -0.00023047 NaN NaN NaN NaN 80.581 0.58777 80.581 80.412 80.999 0 0 0 0 0.0063645 1 51691 66.27 34.967 1 NaN NaN 0 3663400 3663400 0 + 6170 757 3159 3522 10112 10112 TLLEGEESR 9 0 1 Unmodified _TLLEGEESR_ 0 0 0 0 H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;CON__P04264;CON__ENSEMBL:ENSBTAP00000038253;H6VRG2 H6VRG3;H6VRG2 H6VRG2 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 517.2621 2 517.261653 1032.50875 NaN NaN NaN 0.48119 0.0002489 NaN NaN NaN NaN 61.914 0.3686 61.914 61.776 62.144 0 0 0 0 0.015792 1 28869 55.908 20.29 1 NaN NaN 0 20297000 20297000 0 + 6171 876;877 3160 3523 10113 10113 TLLEGEESR 9 0 1 Unmodified _TLLEGEESR_ 0 0 0 0 H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;CON__P04264;CON__ENSEMBL:ENSBTAP00000038253;H6VRG2 H6VRG3;H6VRG2 H6VRG2 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 517.262 2 517.261653 1032.50875 NaN NaN NaN -0.069123 -3.5755E-05 NaN NaN NaN NaN 34.414 0.59303 34.414 34.165 34.759 -3.8147E-06 0 0 0 0.014871 1 18957 57.859 12.141 1 NaN NaN 0 10970000 10970000 0 + 6172 876;877 3160 3523 10114 10114 TLLTGDGGGEATGSPLAQGK 20 1 0 Phospho (STY) _TLLTGDGGGEATGS(ph)PLAQGK_ TLLTGDGGGEAT(0.001)GS(0.999)PLAQGK T(-182.98)LLT(-136.65)GDGGGEAT(-31.2)GS(31.2)PLAQGK 0 0 1 0 J3KSW8;Q6WCQ1;B9EGI2;U6FSN9;H0Y7E2;Q9Y6X7;H0Y2S9;Q5ZEZ6 J3KSW8 J3KSW8 MPRIP;Mprip-Ntrk1 fusion gene;KIAA0864;M-RIP Myosin phosphatase Rho-interacting protein;Tyrosine-protein kinase receptor MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 959.4572 2 955.448777 1908.883 63121.85 0.42435 0.00040545 0.0090824 8.6777E-06 0.43344 0.00041413 955.448382276609 959.455972784502 83.073 1.3006 83.073 82.265 83.565 0 480 120 7 0 0 0 4.024E-166 3 44419 215.98 205.13 4 3.0732 3.8342 0 69821000 19790000 50032000 6173 892 3161 3524 10115;10116;10117 10116 1521 TLLTGDGGGEATGSPLAQGK 20 1 0 Phospho (STY) _TLLTGDGGGEATGS(ph)PLAQGK_ TLLTGDGGGEAT(0.053)GS(0.947)PLAQGK T(-60.63)LLT(-43.09)GDGGGEAT(-12.52)GS(12.52)PLAQGK 0 0 1 0 J3KSW8;Q6WCQ1;B9EGI2;U6FSN9;H0Y7E2;Q9Y6X7;H0Y2S9;Q5ZEZ6 J3KSW8 J3KSW8 MPRIP;Mprip-Ntrk1 fusion gene;KIAA0864;M-RIP Myosin phosphatase Rho-interacting protein;Tyrosine-protein kinase receptor ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 959.4562 2 955.448777 1908.883 NaN NaN NaN 0.020778 1.9852E-05 NaN NaN NaN NaN 86.007 1.3425 86.007 85.6 86.942 0 0 0 0 5.9517E-11 1 55269 72.421 55.479 4 NaN NaN 0 84656000 0 84656000 6174 892 3161 3524 10118 10118 1521 TLRDSPNVEAAHLAR 15 0 2 Phospho (STY) _T(ph)LRDSPNVEAAHLAR_ T(0.59)LRDS(0.41)PNVEAAHLAR T(1.57)LRDS(-1.57)PNVEAAHLAR 0 0 1 1 Q9UHF7;H0YC29;E5RJ97;E5RFF3 Q9UHF7 Q9UHF7 TRPS1 Zinc finger transcription factor Trps1 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 583.9567 3 577.284225 1728.83085 NaN NaN NaN -0.809 -0.00046702 NaN NaN NaN NaN 56.333 1.6188 56.333 55.306 56.925 0 0 0 0 0.0029973 1 34267 43.316 32.211 2 NaN NaN 0 11596000 0 11596000 6175 1229 3162 3525 10119 10119 2998 TLSDDLDEAAK 11 1 0 Phospho (STY) _TLS(ph)DDLDEAAK_ TLS(1)DDLDEAAK T(-39.84)LS(39.84)DDLDEAAK 0 0 1 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 629.2665 2 629.265948 1256.51734 77839.23 0.72974 0.0004592 -0.0018377 -1.1564E-06 0.7279 0.00045805 629.26581786728 633.272932095544 78.947 1.2333 78.947 78.191 79.424 0 431 109 5 0 0 0 1.2399E-05 4 41066 95.417 74.056 2 0.76209 0.95887 0 52140000 27157000 24983000 6176 1202 3163 3526 10120;10121;10122;10123 10121 2392 TLSDDLDEAAK 11 1 0 Phospho (STY) _TLS(ph)DDLDEAAK_ T(0.002)LS(0.998)DDLDEAAK T(-26.2)LS(26.2)DDLDEAAK 0 0 1 0 Q9H0A0;A0A087WV29 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 629.2667 2 629.265948 1256.51734 76758.59 1.1216 0.00070579 -0.04226 -2.6593E-05 1.0793 0.00067919 629.265919331921 633.27294182494 81.403 1.2379 81.403 80.839 82.077 0 614 116 8 0 0 0 0.006976 2 52340 63.76 51.713 2 1.0994 0.7293 0 77432000 35928000 41504000 6177 1202 3163 3526 10124;10125 10125 2392 TLSDYNIQK 9 1 0 Unmodified _TLSDYNIQK_ 0 0 0 0 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;Q8WYN9;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q9UFQ0;Q96C32;Q96MH4;L8B4I8;L8B196;Q96H31;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;Q66K58;Q59EM9;P62987;P0CG47;P0CG48;M0R1V7;Q49A90;M0R1M6;M0R2S1 Q5RKT7 Q5RKT7 RPS27A;HEL112;UBB;UBC;UBA52;DKFZp434K0435;UbC Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 541.2801 2 541.279846 1080.54514 83199.68 0.48008 0.00025986 -0.0016153 -8.7432E-07 0.47846 0.00025898 541.279783576248 545.286856216864 64.97 0.6681 64.97 64.696 65.364 0 248 48 8 0 0 0 0.00022372 2 31068 94.302 69.484 1 0.86255 1.0687 0 137980000 72795000 65181000 6178 558 3164 3527 10126;10127 10126 TLSPTPASATAPTSQGIPTSDEESTPKK 28 2 0 2 Phospho (STY) _TLS(ph)PTPASATAPTSQGIPT(ph)SDEESTPKK_ T(0.024)LS(0.908)PT(0.039)PAS(0.011)AT(0.012)APT(0.01)S(0.01)QGIPT(0.483)S(0.442)DEES(0.032)T(0.029)PKK T(-15.96)LS(13.92)PT(-13.92)PAS(-19.51)AT(-18.97)APT(-18.91)S(-19.23)QGIPT(0.39)S(-0.39)DEES(-11.95)T(-12.37)PKK 0 0 2 1 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 987.447 3 987.112218 2958.31482 61237.38 0.57316 0.00056577 0.038134 3.7642E-05 0.61129 0.00060342 987.446602018527 992.789340073718 80.728 1.532 80.728 79.938 81.47 0 1347 141 14 0 0 0 4.0371E-14 1 42993 60.18 46.539 55 1.1391 1.5711 0 1398300000 612300000 786000000 6179 1212 3165 3528 10128 10128 2433;2988 TLSPTPASATAPTSQGIPTSDEESTPKK 28 2 0 Phospho (STY) _TLSPTPASATAPTSQGIPT(ph)SDEESTPKK_ TLSPTPASAT(0.002)APT(0.042)S(0.042)QGIPT(0.542)S(0.336)DEES(0.016)T(0.019)PKK T(-69.33)LS(-59.32)PT(-52.4)PAS(-35.87)AT(-24.74)APT(-11.1)S(-11.1)QGIPT(2.08)S(-2.08)DEES(-15.28)T(-14.46)PKK 0 0 1 1 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 960.7927 3 960.456774 2878.34849 62259.57 0.89856 0.00086302 0.31032 0.00029805 1.2089 0.0011611 960.791550101267 966.134043550346 78.075 1.678 78.075 77.558 79.236 7.6294E-06 1332 157 15 0 0 0 2.1334E-23 1 49723 77.464 65.341 11 2.044 1.4981 0 461110000 149770000 311340000 6180 1212 3165 3529 10129 10129 2433;2988 TLSPTPASATAPTSQGIPTSDEESTPKK 28 2 0 Phospho (STY) _TLS(ph)PTPASATAPTSQGIPTSDEESTPKK_ T(0.045)LS(0.942)PT(0.012)PASATAPTSQGIPTSDEESTPKK T(-13.16)LS(13.16)PT(-18.8)PAS(-51.19)AT(-51.92)APT(-70.62)S(-70.05)QGIPT(-105.63)S(-108.51)DEES(-108.35)T(-108.15)PKK 0 0 1 1 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 960.7928 3 960.456774 2878.34849 61881.1 0.86137 0.00082731 -0.00012121 -1.1642E-07 0.86125 0.00082719 960.791142215393 966.133813263038 79.906 1.6992 79.906 79.149 80.848 0 1487 161 13 0 0 0 1.1447E-47 1 51147 116.94 97.439 11 2.2606 1.664 0 334270000 96937000 237330000 6181 1212 3165 3529 10130 10130 2433;2988 TLTDEVNSPDSDR 13 0 1 Phospho (STY) _TLTDEVNS(ph)PDSDR_ TLTDEVNS(0.951)PDS(0.049)DR T(-86.55)LT(-69.87)DEVNS(12.89)PDS(-12.89)DR 0 0 1 0 B4DF22;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2 B4DF22 B4DF22 SMARCC2 SWI/SNF complex subunit SMARCC2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 764.8114 2 764.811782 1527.60901 71718.67 0.58208 0.00044518 0.077318 5.9134E-05 0.6594 0.00050432 764.811773415982 769.816151352996 51.1 0.87617 51.1 50.607 51.484 -3.8147E-06 235 72 6 0 0 0 1.6709E-06 4 20829 95.981 77.843 4 0.62685 0.69535 0 8676200 5028100 3648100 6182 190 3166 3530 10131;10132;10133;10134 10133 303 TLTDEVNSPDSDR 13 0 1 Phospho (STY) _TLTDEVNS(ph)PDSDR_ TLT(0.001)DEVNS(0.888)PDS(0.111)DR T(-40.69)LT(-28.31)DEVNS(9.04)PDS(-9.04)DR 0 0 1 0 B4DF22;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2 B4DF22 B4DF22 SMARCC2 SWI/SNF complex subunit SMARCC2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 769.8174 2 764.811782 1527.60901 70403.95 1.0777 0.00082421 -0.44726 -0.00034207 0.6304 0.00048214 764.811516970495 769.815753947135 44.443 0.77876 44.443 44.08 44.859 0 272 75 5 0 0 0 0.0060842 2 26164 46.41 39.385 4 1.6479 1.3038 0 10196000 4689000 5507400 6183 190 3166 3530 10135;10136 10135 303 TLTDEVNSPDSDRR 14 0 2 Phospho (STY) _TLTDEVNS(ph)PDSDRR_ TLTDEVNS(0.876)PDS(0.123)DRR T(-44.53)LT(-35.39)DEVNS(8.51)PDS(-8.51)DRR 0 0 1 1 B4DF22;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2 B4DF22 B4DF22 SMARCC2 SWI/SNF complex subunit SMARCC2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 842.8629 2 842.862338 1683.71012 65542.49 0.62829 0.00052957 0.075089 6.3289E-05 0.70338 0.00059286 842.862439774463 852.870835142767 55.169 1.3998 55.169 54.574 55.973 0 783 111 9 0 0 0 0.00037717 4 23788 69.92 69.92 4 0.6274 0.78299 0 184730000 108720000 76008000 6184 190 3167 3531 10137;10138;10139;10140 10139 303 TLTDEVNSPDSDRR 14 0 2 Phospho (STY) _TLTDEVNS(ph)PDSDRR_ TLT(0.003)DEVNS(0.891)PDS(0.106)DRR T(-32.76)LT(-25.44)DEVNS(9.25)PDS(-9.25)DRR 0 0 1 1 B4DF22;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2 B4DF22 B4DF22 SMARCC2 SWI/SNF complex subunit SMARCC2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 568.9168 3 562.243984 1683.71012 80603.03 0.59364 0.00033377 0.51071 0.00028715 1.1044 0.00062092 562.244119696012 568.91660879343 55.249 1.3019 55.249 54.688 55.99 0 571 103 8 0 0 0 0.00073867 1 23324 51.591 44.389 4 0.61846 0.7689 0 73677000 43450000 30227000 6185 190 3167 3531 10141 10141 303 TLTDEVNSPDSDRR 14 0 2 Phospho (STY) _TLTDEVNS(ph)PDSDRR_ T(0.009)LT(0.244)DEVNS(0.722)PDS(0.024)DRR T(-18.97)LT(-4.71)DEVNS(4.71)PDS(-14.72)DRR 0 0 1 1 B4DF22;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2 B4DF22 B4DF22 SMARCC2 SWI/SNF complex subunit SMARCC2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 852.8729 2 842.862338 1683.71012 65394.78 1.0537 0.0008881 0.2608 0.00021982 1.3145 0.0011079 842.86275564232 852.870849864504 31.463 1.4881 31.463 30.87 32.358 0 635 109 10 0 0 0 0.0012527 1 16532 49.149 36.523 4 1.4951 1.3099 0 404170000 164790000 239380000 6186 190 3167 3531 10142 10142 303 TLTDEVNSPDSDRRDK 16 1 2 Phospho (STY) _TLTDEVNS(ph)PDSDRRDK_ TLT(0.001)DEVNS(0.81)PDS(0.189)DRRDK T(-44.79)LT(-28.37)DEVNS(6.31)PDS(-6.31)DRRDK 0 0 1 2 B4DF22;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2 B4DF22 B4DF22 SMARCC2 SWI/SNF complex subunit SMARCC2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 643.2848 3 643.284619 1926.83203 73962.44 0.71908 0.00046257 0.30786 0.00019804 1.0269 0.00066061 643.284893771475 652.628423954732 24.33 0.73235 24.33 24.085 24.817 1.9073E-06 220 38 9 0 0 0 0.00010186 1 10641 46.663 35.608 4 1.5476 1.3977 0 79533000 30592000 48941000 6187 190 3168 3532 10143 10143 303 TLTELILDAQEHVK 14 1 0 Unmodified _TLTELILDAQEHVK_ 0 0 0 0 B4DNQ1;E9PKP7;A8K962;P17480;Q05BZ1;Q9BQR2 B4DNQ1 B4DNQ1 UBTF Nucleolar transcription factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 539.9697 3 537.298039 1608.87229 85598.89 0.726 0.00039008 -0.6139 -0.00032985 0.1121 6.0228E-05 537.297645899623 539.969081676114 133.41 0.14882 133.41 133.32 133.47 0 30 7 7 0 0 0 0.008068 2 81228 24.558 20.01 1 0.73189 0.86819 0 9687100 4046800 5640300 6188 501 3169 3533 10144;10145 10145 TMCPLLSMKPGEYSYFSPR 19 1 1 2 Oxidation (M),Phospho (STY) _TM(ox)CPLLSM(ox)KPGEYSYFS(ph)PR_ TM(1)CPLLSM(1)KPGEYSYFSPR TMCPLLS(0.001)MKPGEY(0.001)S(0.19)Y(0.002)FS(0.806)PR TM(56.3)CPLLSM(56.3)KPGEYSYFSPR T(-53.06)MCPLLS(-30.89)MKPGEY(-31.7)S(-6.27)Y(-25.19)FS(6.27)PR 0 2 1 1 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 793.0098 3 792.675185 2375.00373 NaN NaN NaN -0.31405 -0.00024894 NaN NaN NaN NaN 108.32 1.068 108.32 107.82 108.89 0 0 0 0 2.0041E-06 1 63399 56.298 44.445 6 NaN NaN 0 70428000 70428000 0 6189 464 3170 3534 10146 10146 124;125 804;805 TMCPLLSMKPGEYSYFSPR 19 1 1 2 Oxidation (M),Phospho (STY) _TM(ox)CPLLSM(ox)KPGEYS(ph)YFSPR_ TM(1)CPLLSM(1)KPGEYSYFSPR TMCPLLS(0.39)MKPGEYS(0.439)YFS(0.171)PR TM(78.84)CPLLSM(78.84)KPGEYSYFSPR T(-65.66)MCPLLS(-0.51)MKPGEY(-40.84)S(0.51)Y(-41.73)FS(-4.09)PR 0 2 1 1 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 799.0192 3 792.675185 2375.00373 NaN NaN NaN -0.084052 -6.6626E-05 NaN NaN NaN NaN 109.14 1.487 109.14 108.4 109.88 0 0 0 0 1.5283E-12 1 70113 78.837 62.045 6 NaN NaN 0 39566000 0 39566000 6190 464 3170 3534 10147 10147 124;125 804;805 TNAENEFVTIK 11 1 0 Unmodified _TNAENEFVTIK_ 0 0 0 0 H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRG2 H6VRG3;H6VRG2 H6VRG2 KRT1 Keratin, type II cytoskeletal 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 633.3215 2 633.322242 1264.62993 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.194 1 86.194 85.694 86.694 0 0 0 0 0.0018389 1 46665 66.595 47.353 1 + 6191 876;877 3171 3535 10148 10148 TNKSPEAKPLPGK 13 3 0 Phospho (STY) _TNKS(ph)PEAKPLPGK_ TNKS(1)PEAKPLPGK T(-48.68)NKS(48.68)PEAKPLPGK 0 0 1 2 P46087;F5H5X6;F5GWB7;F5H709;F5H359 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 482.917 3 482.916591 1445.72794 85380.43 0.61129 0.0002952 0.49985 0.00024138 1.1111 0.00053659 482.916815417908 490.931008724304 17.168 0.24521 17.168 17.053 17.298 0 35 7 7 0 0 0 7.8597E-07 1 4423 93.342 93.342 2 0.90995 0.81917 0 25111000 13034000 12077000 6192 995 3172 3536 10149 10149 1802 TNKSPEAKPLPGK 13 3 0 Phospho (STY) _TNKS(ph)PEAKPLPGK_ TNKS(1)PEAKPLPGK T(-56.64)NKS(56.64)PEAKPLPGK 0 0 1 2 P46087;F5H5X6;F5GWB7;F5H709;F5H359 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 723.8724 2 723.871249 1445.72794 71726.77 0.97967 0.00070915 1.0239 0.00074118 2.0036 0.0014503 723.871832404215 735.893287920656 17.161 0.21611 17.161 17.053 17.269 1.9073E-06 21 6 5 0 0 0 3.7216E-05 1 4426 86.944 86.944 2 0.98164 0.91149 0 7061400 3849900 3211500 6193 995 3172 3536 10150 10150 1802 TNLDLGPTAPSLEK 14 1 0 Phospho (STY) _TNLDLGPTAPS(ph)LEK_ TNLDLGPT(0.176)APS(0.824)LEK T(-72.58)NLDLGPT(-6.7)APS(6.7)LEK 0 0 1 0 Q03164;E9PR05;Q9HB80 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 768.3718 2 768.371279 1534.728 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.194 1 99.194 98.694 99.694 0 0 0 0 2.2754E-06 1 56512 73.834 51.193 3 6194 1034 3173 3537 10151 10151 1909 TNLDLGPTAPSLEK 14 1 0 Phospho (STY) _TNLDLGPTAPS(ph)LEK_ TNLDLGPT(0.053)APS(0.947)LEK T(-43.15)NLDLGPT(-12.56)APS(12.56)LEK 0 0 1 0 Q03164;E9PR05;Q9HB80 Q03164 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 768.3718 2 768.371279 1534.728 73328.3 1.2042 0.00092529 -0.34006 -0.00026129 0.86417 0.000664 768.370597686967 772.37837882877 105.09 0.74097 105.09 104.72 105.46 0 196 67 6 0 0 0 0.003855 1 67671 43.297 43.297 3 1.2628 0.9382 0 8560300 3947500 4612800 6195 1034 3173 3537 10152 10152 1909 TNPEVMVVESDLSDDGK 17 1 0 Oxidation (M),Phospho (STY) _TNPEVM(ox)VVESDLS(ph)DDGK_ TNPEVM(1)VVESDLSDDGK TNPEVMVVES(0.051)DLS(0.949)DDGK TNPEVM(95.43)VVESDLSDDGK T(-89.71)NPEVMVVES(-12.72)DLS(12.72)DDGK 0 1 1 0 A8K8X5;A0A024RA51;Q96GN5;C9JFL7;C9J8L0;C9IZR6 A8K8X5 A8K8X5 CDCA7L Cell division cycle-associated 7-like protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 965.9007 2 965.903011 1929.79147 63471.12 0.39869 0.0003851 -0.39318 -0.00037977 0.0055146 5.3265E-06 966.404091629667 969.909977266164 87.988 0.62248 87.988 87.727 88.35 0 131 55 4 0 0 0 3.7839E-12 4 48207 95.429 81.624 3 0.70082 0.86536 0 23398000 12725000 10674000 6196 179 3174 3538 10153;10154;10155;10156 10156 41 280 TNPEVMVVESDLSDDGK 17 1 0 Oxidation (M),Phospho (STY) _TNPEVM(ox)VVESDLS(ph)DDGK_ TNPEVM(1)VVESDLSDDGK TNPEVMVVES(0.25)DLS(0.75)DDGK TNPEVM(85.94)VVESDLSDDGK T(-76.01)NPEVMVVES(-4.78)DLS(4.78)DDGK 0 1 1 0 A8K8X5;A0A024RA51;Q96GN5;C9JFL7;C9J8L0;C9IZR6 A8K8X5 A8K8X5 CDCA7L Cell division cycle-associated 7-like protein ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 969.9096 2 965.903011 1929.79147 NaN NaN NaN -0.24737 -0.00023894 NaN NaN NaN NaN 89.515 0.45701 89.515 89.343 89.8 0 0 0 0 4.0428E-09 1 49071 85.937 70.047 3 NaN NaN 0 11047000 0 11047000 6197 179 3174 3538 10157 10157 41 280 TNPEVMVVESDLSDDGK 17 1 0 Oxidation (M),Phospho (STY) _TNPEVM(ox)VVESDLS(ph)DDGK_ TNPEVM(1)VVESDLSDDGK TNPEVMVVES(0.193)DLS(0.807)DDGK TNPEVM(52.73)VVESDLSDDGK T(-52.73)NPEVMVVES(-6.22)DLS(6.22)DDGK 0 1 1 0 A8K8X5;A0A024RA51;Q96GN5;C9JFL7;C9J8L0;C9IZR6 A8K8X5 A8K8X5 CDCA7L Cell division cycle-associated 7-like protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 965.9026 2 965.903011 1929.79147 61416.98 0.58589 0.00056591 -0.19668 -0.00018997 0.38921 0.00037594 965.902605572898 969.910331722355 92.794 1.0581 92.794 92.326 93.384 0 442 104 5 0 0 0 8.4394E-05 2 59623 52.731 47.125 3 1.0405 0.73422 0 22363000 12372000 9991700 6198 179 3174 3538 10158;10159 10159 41 280 TNPEVMVVESDLSDDGK 17 1 0 Oxidation (M),Phospho (STY) _TNPEVM(ox)VVESDLS(ph)DDGK_ TNPEVM(1)VVESDLSDDGK TNPEVMVVES(0.188)DLS(0.812)DDGK TNPEVM(47.2)VVESDLSDDGK T(-43.97)NPEVMVVES(-6.36)DLS(6.36)DDGK 0 1 1 0 A8K8X5;A0A024RA51;Q96GN5;C9JFL7;C9J8L0;C9IZR6 A8K8X5 A8K8X5 CDCA7L Cell division cycle-associated 7-like protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 969.9092 2 965.903011 1929.79147 62565.26 0.47969 0.00046333 0.66348 0.00064085 1.1432 0.0011042 965.903363842461 969.912037866215 94.162 0.89537 94.162 93.705 94.6 7.6294E-06 329 81 6 0 0 0 0.00019699 2 60594 47.204 47.204 3 0.87708 0.66626 0 18123000 9572100 8551300 6199 179 3174 3538 10160;10161 10161 41 280 TNQEHAALEAENSK 14 1 0 Unmodified _TNQEHAALEAENSK_ 0 0 0 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 517.2497 3 514.577864 1540.71176 83981.36 0.21626 0.00011128 0.3296 0.0001696 0.54585 0.00028088 514.577795635384 517.249643630439 61.842 0.39134 61.842 61.645 62.036 0 74 23 6 0 0 0 3.1013E-12 2 28647 103.6 89.251 1 1.2273 1.5418 0 28350000 13414000 14935000 6200 999 3175 3539 10162;10163 10162 TNREIIHYIRSK 12 1 2 2 Phospho (STY) _TNREIIHY(ph)IRS(ph)K_ TNREIIHY(1)IRS(1)K T(-50.56)NREIIHY(50.56)IRS(50.56)K 0 0 2 2 A0A087WZE6;F2Z6J8;Q6ZNI0 A0A087WZE6 A0A087WZE6 GCNT7;gcnt Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 7 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 859.4125 2 845.397312 1688.78007 NaN NaN NaN -1.3829 -0.0011691 NaN NaN NaN NaN 103.83 1.2956 103.83 103.11 104.41 0 0 0 0 0.01258 1 60181 50.562 25.842 3 NaN NaN 0 89109000 0 89109000 6201 266 3176 3540 10164 10164 425;3016 TNRPPLSLSR 10 0 2 Unmodified _TNRPPLSLSR_ 0 0 0 1 F8VUA6;Q0QEW2;G3V203;H0YHA7;A0A024QZD1;J3QQ67;Q07020;F8VYV2;B4DDY5;A0A075B7A0 F8VUA6 F8VUA6 RPL18 60S ribosomal protein L18 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 380.8875 3 380.887645 1139.64111 103159.9 -0.011444 -4.359E-06 -0.12585 -4.7935E-05 -0.1373 -5.2294E-05 380.887548423771 387.559724054971 85.849 0.25681 85.849 85.62 85.877 0 47 21 4 0 0 0 0.023121 1 46316 43.897 32.031 1 1.0952 1.3444 0 25575000 9911400 15664000 6202 13 3177 3541 10165 10165 TNRPPLSLSR 10 0 2 Unmodified _TNRPPLSLSR_ 0 0 0 1 F8VUA6;Q0QEW2;G3V203;H0YHA7;A0A024QZD1;J3QQ67;Q07020;F8VYV2;B4DDY5;A0A075B7A0 F8VUA6 F8VUA6 RPL18 60S ribosomal protein L18 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 387.5594 3 380.887645 1139.64111 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.202 1 86.202 85.702 86.702 -7.6294E-06 0 0 0 0.0028149 1 46670 56.087 43.471 1 6203 13 3177 3541 10166 10166 TNRPPLSLSR 10 0 2 Unmodified _TNRPPLSLSR_ 0 0 0 1 F8VUA6;Q0QEW2;G3V203;H0YHA7;A0A024QZD1;J3QQ67;Q07020;F8VYV2;B4DDY5;A0A075B7A0 F8VUA6 F8VUA6 RPL18 60S ribosomal protein L18 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 387.5595 3 380.887645 1139.64111 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.554 1 86.554 86.054 87.054 0 0 0 0 0.0023593 1 46920 59.198 48.721 1 6204 13 3177 3541 10167 10167 TNRPPLSLSR 10 0 2 Unmodified _TNRPPLSLSR_ 0 0 0 1 F8VUA6;Q0QEW2;G3V203;H0YHA7;A0A024QZD1;J3QQ67;Q07020;F8VYV2;B4DDY5;A0A075B7A0 F8VUA6 F8VUA6 RPL18 60S ribosomal protein L18 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 387.5597 3 380.887645 1139.64111 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.996 1 86.996 86.496 87.496 0 0 0 0 0.002148 1 47230 60.641 49.477 1 6205 13 3177 3541 10168 10168 TNYNDRYDEIR 11 0 2 Unmodified _TNYNDRYDEIR_ 0 0 0 1 P62424;Q9BY74;Q5T8U2 P62424 P62424 RPL7A;RP-L7a 60S ribosomal protein L7a MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 486.892 3 486.891783 1457.65352 85388.82 0.38 0.00018502 -0.043624 -2.124E-05 0.33637 0.00016378 486.891729612885 493.563943911928 76.667 1.1637 76.667 76.169 77.333 0 535 99 8 0 0 0 0.0010843 2 39516 74.76 64.708 1 0.8188 1.0222 0 198910000 111810000 87103000 6206 1019 3178 3542 10169;10170 10170 TNYNDRYDEIR 11 0 2 Unmodified _TNYNDRYDEIR_ 0 0 0 1 P62424;Q9BY74;Q5T8U2 P62424 P62424 RPL7A;RP-L7a 60S ribosomal protein L7a MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 730.3375 2 729.834037 1457.65352 70497.23 0.93893 0.00068526 -1.3974 -0.0010198 -0.45844 -0.00033459 729.833641503341 739.842115160343 76.68 0.8983 76.68 76.281 77.179 0 298 76 6 0 0 0 0.032713 1 39554 42.743 22.957 1 0.91489 1.1364 0 59381000 32547000 26834000 6207 1019 3178 3542 10171 10171 TPAAAAAMNLASPR 14 0 1 Oxidation (M),Phospho (STY) _TPAAAAAM(ox)NLAS(ph)PR_ TPAAAAAM(1)NLASPR TPAAAAAMNLAS(1)PR TPAAAAAM(157.84)NLASPR T(-144.69)PAAAAAMNLAS(144.69)PR 0 1 1 0 A0A140VK53;Q9UQ35;O60382;A0AUK8 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 724.336 2 719.331434 1436.64831 71489.26 0.76721 0.00055188 -0.0093923 -6.7562E-06 0.75782 0.00054512 719.331253744533 724.836861075746 61.341 1.4179 61.341 60.674 62.092 0 396 100 5 0 0 0 1.2912E-50 3 28400 157.84 140.09 2 1.2536 1.5778 0 49226000 21699000 27527000 6208 383 3179 3543 10172;10173;10174 10174 96 645 TPAAAAAMNLASPR 14 0 1 Oxidation (M),Phospho (STY) _TPAAAAAM(ox)NLAS(ph)PR_ TPAAAAAM(1)NLASPR TPAAAAAMNLAS(1)PR TPAAAAAM(40.38)NLASPR T(-36.61)PAAAAAMNLAS(36.61)PR 0 1 1 0 A0A140VK53;Q9UQ35;O60382;A0AUK8 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 719.3322 2 719.331434 1436.64831 NaN NaN NaN 0.032562 2.3423E-05 NaN NaN NaN NaN 56.003 0.71916 56.003 55.443 56.162 0 0 0 0 0.0049273 1 34083 40.377 29.854 2 NaN NaN 0 4247400 4247400 0 6209 383 3179 3543 10175 10175 96 645 TPAAPASPAAVPSEGSGGSTTGWR 24 0 1 2 Phospho (STY) _TPAAPAS(ph)PAAVPSEGS(ph)GGSTTGWR_ TPAAPAS(1)PAAVPS(0.457)EGS(0.474)GGS(0.045)T(0.011)T(0.013)GWR T(-48.15)PAAPAS(48.15)PAAVPS(-0.16)EGS(0.16)GGS(-10.26)T(-16.39)T(-15.47)GWR 0 0 2 0 P07199 P07199 P07199 CENPB Major centromere autoantigen B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1187.0045 2 1186.50142 2370.98828 57078.94 0.16773 0.00019902 0.17393 0.00020637 0.34167 0.00040539 1187.00335986212 1192.00649108549 87.666 0.75514 87.666 87.297 88.052 0 415 68 8 0 0 0 2.9304E-37 3 47670 114.92 100.57 21 0.78292 0.98802 0 74779000 42934000 31845000 6210 958 3180 3544 10176;10177;10178 10176 1677;1678 TPAAPASPAAVPSEGSGGSTTGWR 24 0 1 Phospho (STY) _TPAAPAS(ph)PAAVPSEGSGGSTTGWR_ TPAAPAS(1)PAAVPSEGSGGSTTGWR T(-39.73)PAAPAS(39.73)PAAVPS(-44.64)EGS(-49.18)GGS(-43.56)T(-43.56)T(-43.56)GWR 0 0 1 0 P07199 P07199 P07199 CENPB Major centromere autoantigen B MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1146.9896 2 1146.51825 2291.02195 58898.73 0.29372 0.00033675 0.761 0.0008725 1.0547 0.0012093 1147.02183799001 1152.02402086549 82.229 0.75512 82.229 81.746 82.501 0 316 70 7 0 0 0 1.4693E-14 1 43806 73.405 59.978 7 1.1014 1.3857 0 46771000 23494000 23278000 6211 958 3180 3545 10179 10179 1677;1678 TPAEVVSTCDITFACVSDPK 20 1 0 Unmodified _TPAEVVSTCDITFACVSDPK_ 0 0 0 0 K7EMM8;D3DUE6;D3DUE7;Q49A26;K7EK70 K7EMM8 K7EMM8 GLYR1;N-PAC Putative oxidoreductase GLYR1 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1103.0186 2 1099.01121 2196.00787 NaN NaN NaN 0.21493 0.00023621 NaN NaN NaN NaN 114.55 0.39449 114.55 114.31 114.71 0 0 0 0 0.030309 1 73742 28.546 19.258 1 NaN NaN 0 6036900 0 6036900 6212 767 3181 3546 10180 10180 TPAFSPFVR 9 0 1 Phospho (STY) _TPAFS(ph)PFVR_ TPAFS(1)PFVR T(-62.66)PAFS(62.66)PFVR 0 0 1 0 Q7Z5J4 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 551.2599 2 551.260075 1100.5056 NaN NaN NaN 0.17938 9.8885E-05 NaN NaN NaN NaN 109.46 0.74795 109.46 109.26 110.01 -7.6294E-06 0 0 0 0.0019609 1 64615 71.555 42.597 2 NaN NaN 0 5179100 5179100 0 6213 1137 3182 3547 10181 10181 2181 TPAFSPFVR 9 0 1 Phospho (STY) _TPAFS(ph)PFVR_ TPAFS(1)PFVR T(-59.66)PAFS(59.66)PFVR 0 0 1 0 Q7Z5J4 Q7Z5J4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 556.2645 2 551.260075 1100.5056 84229.39 0.99025 0.00054589 -0.24932 -0.00013744 0.74093 0.00040845 551.259860311391 556.263984075044 114.64 0.80408 114.64 114.23 115.04 7.6294E-06 265 76 5 0 0 0 0.00085918 1 73661 77.062 68.29 2 2.1877 1.7769 0 6850800 2337800 4513000 6214 1137 3182 3547 10182 10182 2181 TPAPPEPGSPAPGEGPSGR 19 0 1 Phospho (STY) _TPAPPEPGS(ph)PAPGEGPSGR_ TPAPPEPGS(1)PAPGEGPSGR T(-56.89)PAPPEPGS(39.64)PAPGEGPS(-39.64)GR 0 0 1 0 A0A024R4Q5;P0C1Z6 A0A024R4Q5 A0A024R4Q5 TFPT TCF3 fusion partner MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 919.41 2 919.409455 1836.80436 62666.4 0.45291 0.00041641 -0.20106 -0.00018486 0.25185 0.00023155 919.409047688323 924.413376006459 57.112 1.2178 57.112 56.579 57.797 3.8147E-06 651 101 9 0 0 0 2.5603E-13 3 24666 84.035 84.035 3 0.63691 0.80436 0 113510000 68626000 44885000 6215 90 3183 3548 10183;10184;10185 10183 118 TPAPPEPGSPAPGEGPSGR 19 0 1 Phospho (STY) _TPAPPEPGS(ph)PAPGEGPSGR_ TPAPPEPGS(0.991)PAPGEGPS(0.009)GR T(-40.86)PAPPEPGS(20.48)PAPGEGPS(-20.48)GR 0 0 1 0 A0A024R4Q5;P0C1Z6 A0A024R4Q5 A0A024R4Q5 TFPT TCF3 fusion partner MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 919.4099 2 919.409455 1836.80436 63478.9 1.0245 0.00094192 0.12748 0.00011721 1.152 0.0010591 919.409470038668 924.413816031958 54.051 1.11 54.051 53.497 54.607 -3.8147E-06 650 93 10 0 0 0 2.1187E-05 1 32737 52.298 52.298 3 1.1933 0.79911 0 120580000 56645000 63936000 6216 90 3183 3548 10186 10186 118 TPEELDDSDFETEDFDVR 18 0 1 Phospho (STY) _TPEELDDS(ph)DFETEDFDVR_ T(0.005)PEELDDS(0.942)DFET(0.054)EDFDVR T(-23.09)PEELDDS(12.45)DFET(-12.45)EDFDVR 0 0 1 0 B4DKT9;B4DU00;G3XAM7;B4E2G8;P35221 B4DKT9 B4DKT9 CTNNA1 Catenin alpha-1 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1120.4371 2 1119.93355 2237.85255 NaN NaN NaN 2.1189 0.002373 NaN NaN NaN NaN 119.49 0.75665 119.49 119.19 119.95 -7.6294E-06 0 0 0 0.0022843 1 76997 40.88 35.274 3 NaN NaN 0 23502000 23502000 0 6217 631 3184 3549 10187 10187 1039 TPELPEPSVK 10 1 0 Phospho (STY) _T(ph)PELPEPSVK_ T(1)PELPEPSVK T(72.5)PELPEPS(-72.5)VK 0 0 1 0 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3;E9PCT1;M0R088;B4DED5 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 588.7814 2 588.781037 1175.54752 79659.64 0.75683 0.00044561 0.13121 7.7254E-05 0.88804 0.00052286 588.780936692108 592.788109781092 80.199 1.4923 80.199 79.533 81.026 0 621 137 6 0 0 0 5.1039E-06 4 42145 119.03 95.6 2 0.95832 1.1869 0 160430000 78064000 82364000 6218 353 3185 3550 10188;10189;10190;10191 10188 2692 TPENLITEIR 10 0 1 Phospho (STY) _T(ph)PENLITEIR_ T(1)PENLITEIR T(67.15)PENLIT(-67.15)EIR 0 0 1 0 Q5SYF9;Q5VY60;Q7Z4H7 Q5SYF9 Q5SYF9 HAUS6 HAUS augmin-like complex subunit 6 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 633.3113 2 633.310493 1264.60643 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.72 1 105.72 105.22 106.22 0 0 0 0 0.003424 1 61396 73.848 58.646 2 6219 1101 3186 3551 10192 10192 2945 TPENLITEIR 10 0 1 Phospho (STY) _T(ph)PENLITEIR_ T(1)PENLITEIR T(47.34)PENLIT(-47.34)EIR 0 0 1 0 Q5SYF9;Q5VY60;Q7Z4H7 Q5SYF9 Q5SYF9 HAUS6 HAUS augmin-like complex subunit 6 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 638.3154 2 633.310493 1264.60643 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.73 1 105.73 105.23 106.23 0 0 0 0 0.017331 1 61399 59.57 41.761 2 6220 1101 3186 3551 10193 10193 2945 TPEPVVPTAPEPHPTTSTDQPVTPK 25 1 0 Phospho (STY) _T(ph)PEPVVPTAPEPHPTTSTDQPVTPK_ T(0.999)PEPVVPT(0.001)APEPHPTTSTDQPVTPK T(30.93)PEPVVPT(-30.93)APEPHPT(-40.02)T(-40.02)S(-40.02)T(-40.02)DQPVT(-39.84)PK 0 0 1 0 Q14676;B4DYH4 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 901.7672 3 901.768624 2702.28404 64121.48 0.77787 0.00070146 0.070537 6.3608E-05 0.84841 0.00076507 902.103006933953 904.774525873952 88.96 0.72635 88.96 88.533 89.26 0 213 65 6 0 0 0 2.8622E-06 1 48478 42.181 38.967 7 0.46481 0.58026 0 26111000 15087000 11024000 6221 1059 3187 3552 10194 10194 2927 TPESIVPIAPELQPSTSR 18 0 1 Phospho (STY) _T(ph)PESIVPIAPELQPSTSR_ T(0.937)PES(0.063)IVPIAPELQPSTSR T(11.7)PES(-11.7)IVPIAPELQPS(-75.38)T(-75.38)S(-75.38)R 0 0 1 0 Q14676 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1002.0019 2 1001.49827 2000.98199 61746.23 0.43939 0.00044005 0.42939 0.00043004 0.86879 0.00087009 1001.49856536472 1006.50277396299 121.01 0.68046 121.01 120.68 121.36 0 359 52 9 0 0 0 8.5212E-07 1 72787 75.376 66.089 5 0.4489 0.56657 0 80031000 53123000 26908000 6222 1059 3188 3553 10195 10195 2928 TPESKPTILVK 11 2 0 Phospho (STY) _T(ph)PESKPTILVK_ T(1)PESKPTILVK T(36.93)PES(-36.93)KPT(-59.45)ILVK 0 0 1 1 A0JLN3;Q9Y3B9;A8K201 A0JLN3 A0JLN3 RRP15 RRP15-like protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 654.861 2 646.846711 1291.67887 75657.8 0.8448 0.00054646 -0.15246 -9.8618E-05 0.69235 0.00044784 646.846530259194 654.860801262416 74.635 1.9445 74.635 73.368 75.313 0 898 171 8 0 0 0 9.9752E-06 3 37986 98.407 75.289 3 0.7719 1.0211 0 316730000 186640000 130090000 6223 394 3189 3554 10196;10197;10198 10196 2711 TPESKPTILVK 11 2 0 Phospho (STY) _T(ph)PESKPTILVK_ T(0.997)PES(0.003)KPT(0.001)ILVK T(25.55)PES(-25.55)KPT(-32.18)ILVK 0 0 1 1 A0JLN3;Q9Y3B9;A8K201 A0JLN3 A0JLN3 RRP15 RRP15-like protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 646.847 2 646.846711 1291.67887 75393 1.2292 0.0007951 0.062761 4.0597E-05 1.292 0.0008357 646.84672604374 654.860871408009 55.743 3.2198 55.743 53.414 56.633 0 1492 275 8 0 0 0 0.018606 2 33876 52.071 40.473 3 1.0094 0.75308 0 121750000 61563000 60191000 6224 394 3189 3554 10199;10200 10200 2711 TPESQPDTPPGTPLVSQDEK 20 1 0 Phospho (STY) _TPESQPDT(ph)PPGTPLVSQDEK_ T(0.002)PES(0.004)QPDT(0.94)PPGT(0.054)PLVSQDEK T(-27.18)PES(-24.21)QPDT(12.42)PPGT(-12.42)PLVS(-32.94)QDEK 0 0 1 0 A0A0D9SEV0;M0R000;M0QYI1;A0A0D9SFD6;M0R3C8;A0A0D9SFL2;M0QYH2;A0A1S5RA93;Q96T60 A0A0D9SEV0 A0A0D9SEV0 PNKP Bifunctional polynucleotide phosphatase/kinase;Polynucleotide 3-phosphatase;Polynucleotide 5-hydroxyl-kinase MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1101.9927 2 1101.99375 2201.97294 58398.16 0.47291 0.00052114 -0.36477 -0.00040198 0.10813 0.00011916 1102.49480160459 1106.00069147944 76.99 0.87383 76.99 76.598 77.472 0 325 76 7 0 0 0 1.3793E-08 2 39877 72.321 64.217 5 0.43613 0.54617 0 61156000 42804000 18352000 6225 331 3190 3555 10201;10202 10201 2691 TPFNTDLGENSGIGK 15 1 0 Phospho (STY) _TPFNTDLGENS(ph)GIGK_ TPFNTDLGENS(1)GIGK T(-148.35)PFNT(-73.97)DLGENS(73.97)GIGK 0 0 1 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 819.3694 2 815.361442 1628.70833 67386.18 1.1714 0.00095515 -0.39923 -0.00032552 0.77221 0.00062963 815.361052529895 819.368466166127 91.57 1.1518 91.57 90.82 91.972 0 257 98 5 0 0 0 4.2196E-51 2 50399 159.88 159.88 3 0.59138 0.74715 0 46284000 30938000 15347000 6226 1120 3191 3556 10203;10204 10204 2132 TPFNTDLGENSGIGK 15 1 0 Phospho (STY) _TPFNTDLGENS(ph)GIGK_ TPFNT(0.002)DLGENS(0.998)GIGK T(-52.11)PFNT(-28.1)DLGENS(28.1)GIGK 0 0 1 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 819.3689 2 815.361442 1628.70833 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.438 1 90.438 89.938 90.938 0 0 0 0 0.00010215 1 49754 58.079 43.659 3 6227 1120 3191 3556 10205 10205 2132 TPGFSVQSISDFEK 14 1 0 2 Phospho (STY) _TPGFSVQS(ph)IS(ph)DFEK_ T(0.001)PGFS(0.109)VQS(0.894)IS(0.997)DFEK T(-31.04)PGFS(-9.26)VQS(9.26)IS(24.13)DFEK 0 0 2 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 851.8453 2 851.344076 1700.6736 NaN NaN NaN 0.26715 0.00022744 NaN NaN NaN NaN 122.16 0.52357 122.16 121.9 122.43 0 0 0 0 8.3769E-05 1 73851 59.248 41.383 6 NaN NaN 0 4153000 4153000 0 6228 1223 3192 3557 10206 10206 2483;2484 TPGLRTPAAGER 12 0 2 Phospho (STY) _TPGLRT(ph)PAAGER_ T(0.215)PGLRT(0.785)PAAGER T(-5.63)PGLRT(5.63)PAAGER 0 0 1 1 Q53HL2;A8K7A2;B4DXT3 Q53HL2 Q53HL2 CDCA8 Borealin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 442.554 3 435.881881 1304.62381 89902.3 0.16048 6.9952E-05 -0.053986 -2.3531E-05 0.1065 4.642E-05 435.881810079848 442.554066095332 56.662 1.0374 56.662 56.121 57.158 0 465 87 8 0 0 0 0.0024894 2 24513 64.52 42.889 2 0.72933 0.90828 0 110930000 65629000 45300000 6229 1090 3193 3558 10207;10208 10207 2937 TPGPGAQSALR 11 0 1 Unmodified _TPGPGAQSALR_ 0 0 0 0 P62263;H0YB22;E5RH77 P62263 P62263 RPS14 40S ribosomal protein S14 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 527.7861 2 527.78563 1053.55671 87955.75 0.37121 0.00019592 0.89728 0.00047357 1.2685 0.00066949 527.786285276648 532.790098713641 55.021 0.51564 55.021 54.661 55.177 0 97 40 4 0 0 0 0.014621 1 23424 68.557 54.966 1 1.0859 1.1853 0 5197700 2905000 2292700 6230 1017 3194 3559 10209 10209 TPHVQAVQGPLGSPPK 16 1 0 Phospho (STY) _TPHVQAVQGPLGS(ph)PPK_ TPHVQAVQGPLGS(1)PPK T(-38.12)PHVQAVQGPLGS(38.12)PPK 0 0 1 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 567.6248 3 564.953817 1691.83962 82000.98 0.59813 0.00033792 -0.31618 -0.00017863 0.28196 0.00015929 564.953749477821 567.625037832174 85.433 1.3867 85.433 84.794 86.181 7.6294E-06 267 133 4 0 0 0 0.00045325 1 46397 41.962 37.16 2 2.6494 3.3601 0 36319000 7366600 28952000 6231 1070 3195 3560 10210 10210 2024 TPHVQAVQGPLGSPPK 16 1 0 Phospho (STY) _TPHVQAVQGPLGS(ph)PPK_ TPHVQAVQGPLGS(1)PPK T(-58.43)PHVQAVQGPLGS(58.43)PPK 0 0 1 0 Q15149 Q15149 Q15149 PLEC Plectin MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 567.6251 3 564.953817 1691.83962 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.049 1 85.049 84.549 85.549 0 0 0 0 2.7339E-06 1 45879 65.16 53.259 2 6232 1070 3195 3560 10211 10211 2024 TPHVQAVQGPLGSPPK 16 1 0 Phospho (STY) _TPHVQAVQGPLGS(ph)PPK_ TPHVQAVQGPLGS(1)PPK T(-42.51)PHVQAVQGPLGS(42.51)PPK 0 0 1 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 567.6255 3 564.953817 1691.83962 80604.5 0.71964 0.00040656 0.11761 6.6443E-05 0.83724 0.000473 564.953706441016 567.625239140016 75.263 1.1025 75.263 74.7 75.802 0 317 95 5 0 0 0 0.00015196 1 47844 46.415 46.415 2 3.0498 2.3654 0 15480000 4629100 10851000 6233 1070 3195 3560 10212 10212 2024 TPITSVPLGPLASSPTK 17 1 0 Phospho (STY) _TPITSVPLGPLAS(ph)SPTK_ TPITSVPLGPLAS(0.333)S(0.333)PT(0.333)K T(-73.94)PIT(-56.44)S(-49.01)VPLGPLAS(0)S(0)PT(0)K 0 0 1 0 Q15911 Q15911 Q15911 ZFHX3 Zinc finger homeobox protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 873.4551 2 873.457885 1744.90122 71340.98 0.73458 0.00064163 -0.53 -0.00046293 0.20459 0.0001787 873.456735119107 877.965956861919 119.26 0.36404 119.26 119.05 119.42 -7.6294E-06 79 31 4 0 0 0 1.8948E-09 1 71542 85.457 85.457 6 0.78481 0.93079 0 8590500 4535300 4055200 6234 1076 3196 3561 10213 10213 2031;2032;2932 TPLALAGSPTPK 12 1 0 Phospho (STY) _TPLALAGS(ph)PTPK_ TPLALAGS(0.988)PT(0.012)PK T(-128.53)PLALAGS(19.03)PT(-19.03)PK 0 0 1 0 B9EGQ5;M0QXA7;O95785 B9EGQ5 B9EGQ5 WIZ Protein Wiz MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 616.8184 2 616.817954 1231.62135 78653.29 0.2898 0.00017875 0.2539 0.00015661 0.5437 0.00033537 616.817974385161 620.825120088257 83.535 1.2079 83.535 83.01 84.218 0 409 111 5 0 0 0 1.1012E-32 3 44989 151.99 125.3 3 0.64734 0.81914 0 44213000 27221000 16992000 6235 731 3197 3562 10214;10215;10216 10215 1212 TPLALAGSPTPK 12 1 0 Phospho (STY) _TPLALAGS(ph)PTPK_ TPLALAGS(0.837)PT(0.163)PK T(-76.23)PLALAGS(7.12)PT(-7.12)PK 0 0 1 0 B9EGQ5;M0QXA7;O95785 B9EGQ5 B9EGQ5 WIZ Protein Wiz MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 620.8256 2 616.817954 1231.62135 77679.53 0.74945 0.00046227 0.14028 8.6527E-05 0.88973 0.0005488 616.8180420029 620.825061501813 84.508 1.0028 84.508 83.996 84.998 0 409 89 6 0 0 0 0.00027851 3 54012 86.756 77.237 3 1.6298 1.0583 0 36449000 14086000 22363000 6236 731 3197 3562 10217;10218;10219 10217 1212 TPLDLFAHFGPEPGDHSDPLPPSAPSPTR 29 0 1 Phospho (STY) _TPLDLFAHFGPEPGDHSDPLPPSAPS(ph)PTR_ TPLDLFAHFGPEPGDHSDPLPPS(0.023)APS(0.745)PT(0.232)R T(-40.52)PLDLFAHFGPEPGDHS(-36.13)DPLPPS(-15.12)APS(5.06)PT(-5.06)R 0 0 1 0 Q8N1G0;F8WCX2 Q8N1G0 Q8N1G0 ZNF687 Zinc finger protein 687 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1045.4932 3 1044.82027 3131.43898 58510 0.92328 0.00096466 -0.58527 -0.0006115 0.33801 0.00035316 1045.48943583861 1048.48918695967 133.44 0.17572 133.44 133.33 133.51 1.5259E-05 32 8 7 0 0 0 1.2664E-10 1 81223 46.01 46.01 5 0.53112 0.6663 0 41586000 26810000 14777000 6237 1150 3198 3563 10220 10220 2223 TPPAPSPFDLPELK 14 1 0 Phospho (STY) _TPPAPS(ph)PFDLPELK_ TPPAPS(1)PFDLPELK T(-38.42)PPAPS(38.42)PFDLPELK 0 0 1 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 794.8877 2 794.886564 1587.75858 70999.89 1.098 0.00087276 -0.030321 -2.4101E-05 1.0677 0.00084866 795.388009255788 798.893557707423 124.7 0.57529 124.7 124.38 124.95 0 179 52 5 0 0 0 0.0028183 2 75480 53.3 53.3 2 0.47006 0.55761 0 9947500 6083100 3864500 6238 944 3199 3564 10221;10222 10221 1631;2859 TPPAPSPFDLPELK 14 1 0 Phospho (STY) _T(ph)PPAPSPFDLPELK_ T(1)PPAPSPFDLPELK T(60.54)PPAPS(-60.54)PFDLPELK 0 0 1 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 794.8873 2 794.886564 1587.75858 68294.31 1.1472 0.00091187 -0.23139 -0.00018393 0.91578 0.00072794 794.88650119444 798.893377867981 127.69 1.4693 127.69 126.94 128.41 0 1075 134 12 0 0 0 3.5583E-12 5 77565 109.83 90.068 2 0.96389 1.1906 0 546480000 277280000 269200000 6239 944 3199 3564 10223;10224;10225;10226;10227 10227 1631;2859 TPPAPSPFDLPELK 14 1 0 Phospho (STY) _T(ph)PPAPSPFDLPELK_ T(1)PPAPSPFDLPELK T(66.53)PPAPS(-66.53)PFDLPELK 0 0 1 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 794.8873 2 794.886564 1587.75858 68063.62 1.1192 0.00088964 0.11283 8.969E-05 1.232 0.00097933 794.886706233996 798.893571652093 134.72 0.27039 134.72 134.63 134.9 0 44 7 9 0 0 0 1.6142E-16 2 87002 110.98 100.04 2 1.0246 0.67627 0 62743000 30902000 31841000 6240 944 3199 3564 10228;10229 10229 1631;2859 TPPAPSPFDLPELK 14 1 0 2 Phospho (STY) _T(ph)PPAPS(ph)PFDLPELK_ T(1)PPAPS(1)PFDLPELK T(58.08)PPAPS(58.08)PFDLPELK 0 0 2 0 Q59HG1;O95239;B3KNC0 Q59HG1 Q59HG1 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 835.3732 2 834.86973 1667.72491 66364.05 0.77019 0.00064301 0.082796 6.9124E-05 0.85299 0.00071213 834.869872261953 838.876815296527 133.32 0.60022 133.32 132.97 133.57 0 311 40 10 0 0 0 0.0020609 2 80930 58.079 50.679 1 0.59533 0.73723 0 173210000 109600000 63608000 6241 944 3199 3565 10230;10231 10230 1631;2859 TPPLITDYR 9 0 1 Unmodified _TPPLITDYR_ 0 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 538.293 2 538.292756 1074.57096 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.365 1 90.365 89.865 90.865 7.6294E-06 0 0 0 0.020376 1 49696 47.198 23.043 1 6242 962 3200 3566 10232 10232 TPPLITDYR 9 0 1 Unmodified _TPPLITDYR_ 0 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 543.2967 2 538.292756 1074.57096 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.825 1 90.825 90.325 91.325 0 0 0 0 0.0078447 1 50050 57.59 35.459 1 6243 962 3200 3566 10233 10233 TPPTPPSSIVAK 12 1 0 Phospho (STY) _TPPT(ph)PPSSIVAK_ T(0.009)PPT(0.976)PPS(0.007)S(0.007)IVAK T(-20.35)PPT(20.35)PPS(-21.22)S(-21.22)IVAK 0 0 1 0 B4DFE2;A8K5V5;Q96QT6 B4DFE2 B4DFE2 PHF12 PHD finger protein 12 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 637.8241 2 637.823236 1273.63192 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.939 1 73.939 73.439 74.439 0 0 0 0 0.015537 1 37789 49.423 25.995 4 6244 476 3201 3567 10234 10234 2746 TPQEAIMDGTEIAVSPR 17 0 1 Oxidation (M),Phospho (STY) _TPQEAIM(ox)DGTEIAVS(ph)PR_ TPQEAIM(1)DGTEIAVSPR TPQEAIMDGT(0.001)EIAVS(0.999)PR TPQEAIM(99.09)DGTEIAVSPR T(-93.71)PQEAIMDGT(-29.11)EIAVS(29.11)PR 0 1 1 0 B4DVB5;Q06587 B4DVB5 B4DVB5 RING1 E3 ubiquitin-protein ligase RING1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 955.9326 2 955.931906 1909.84926 NaN NaN NaN -0.31003 -0.00029637 NaN NaN NaN NaN 88.889 0.6692 88.889 88.685 89.354 7.6294E-06 0 0 0 1.5412E-15 1 48818 99.092 82.46 3 NaN NaN 0 14357000 14357000 0 6245 665 3202 3568 10235 10235 169 1111 TPQEAIMDGTEIAVSPR 17 0 1 Oxidation (M),Phospho (STY) _TPQEAIM(ox)DGTEIAVS(ph)PR_ TPQEAIM(1)DGTEIAVSPR TPQEAIMDGT(0.012)EIAVS(0.988)PR TPQEAIM(60.94)DGTEIAVSPR T(-55.55)PQEAIMDGT(-19.08)EIAVS(19.08)PR 0 1 1 0 B4DVB5;Q06587 B4DVB5 B4DVB5 RING1 E3 ubiquitin-protein ligase RING1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 960.9344 2 955.931906 1909.84926 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.814 1 87.814 87.314 88.314 0 0 0 0 0.00013693 1 47820 60.938 37.458 3 6246 665 3202 3568 10236 10236 169 1111 TPQEAITDGLEIVVSPR 17 0 1 Phospho (STY) _TPQEAITDGLEIVVS(ph)PR_ TPQEAITDGLEIVVS(1)PR T(-157.73)PQEAIT(-92.33)DGLEIVVS(92.33)PR 0 0 1 0 X6RFN3;Q99496 X6RFN3 X6RFN3 RNF2 E3 ubiquitin-protein ligase RING2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 952.9725 2 952.971888 1903.92922 62806.31 0.73061 0.00069625 0.41367 0.00039421 1.1443 0.0010905 952.971634662857 957.976014147595 123.59 1.0505 123.59 123.29 124.34 0 484 91 8 0 0 0 6.5447E-63 2 74745 166.47 157.65 3 1.2334 1.5528 0 50873000 22823000 28051000 6247 1190 3203 3569 10237;10238 10238 2354;2978 TPQEAITDGLEIVVSPR 17 0 1 Phospho (STY) _TPQEAITDGLEIVVS(ph)PR_ TPQEAIT(0.004)DGLEIVVS(0.996)PR T(-46.37)PQEAIT(-24.45)DGLEIVVS(24.45)PR 0 0 1 0 X6RFN3;Q99496 X6RFN3 X6RFN3 RNF2 E3 ubiquitin-protein ligase RING2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 952.9734 2 952.971888 1903.92922 62973.13 0.78003 0.00074335 0.56839 0.00054166 1.3484 0.001285 952.973087739503 957.976335071536 132.41 0.67857 132.41 132.15 132.83 0 430 65 9 0 0 0 0.0002135 1 85424 47.68 41.956 3 1.8602 1.3035 0 34930000 12633000 22296000 6248 1190 3203 3569 10239 10239 2354;2978 TPQEAITDGLEIVVSPR 17 0 1 2 Phospho (STY) _T(ph)PQEAITDGLEIVVS(ph)PR_ T(1)PQEAIT(0.003)DGLEIVVS(0.997)PR T(54.84)PQEAIT(-25.96)DGLEIVVS(25.96)PR 0 0 2 0 X6RFN3;Q99496 X6RFN3 X6RFN3 RNF2 E3 ubiquitin-protein ligase RING2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 997.9589 2 992.955053 1983.89555 62022.16 0.45054 0.00044737 0.13469 0.00013375 0.58524 0.00058111 992.955042959534 998.461242613383 131.57 0.63919 131.57 131.23 131.87 -1.5259E-05 241 54 7 0 0 0 2.4592E-10 5 80067 90.464 82.351 3 1.2513 1.4023 0 10006000 4291400 5714700 6249 1190 3203 3570 10240;10241;10242;10243;10244 10243 2354;2978 TPSKPPAQLSPSVPK 15 2 0 Phospho (STY) _TPSKPPAQLS(ph)PSVPK_ T(0.001)PS(0.001)KPPAQLS(0.931)PS(0.067)VPK T(-29.69)PS(-29.93)KPPAQLS(11.44)PS(-11.44)VPK 0 0 1 1 F5H8D7;B4DTD3;B2RCY5;A0A024R0S8;Q59HH7;P18887;M0QYS5;B4DEB2 F5H8D7 F5H8D7 XRCC1 DNA repair protein XRCC1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 807.4183 2 807.418563 1612.82257 69770.75 0.53479 0.0004318 0.10003 8.0764E-05 0.63481 0.00051256 807.920252994606 815.4327174414 73.476 0.54565 73.476 73.242 73.787 0 129 47 4 0 0 0 0.0013887 1 37350 43.592 36.574 4 0.49019 0.6009 0 33257000 22430000 10828000 6250 33 3204 3571 10245 10245 39;40 TPSKPPAQLSPSVPK 15 2 0 Phospho (STY) _TPSKPPAQLSPS(ph)VPK_ T(0.001)PS(0.001)KPPAQLS(0.403)PS(0.596)VPK T(-30.12)PS(-29.94)KPPAQLS(-1.7)PS(1.7)VPK 0 0 1 1 F5H8D7;B4DTD3;B2RCY5;A0A024R0S8;Q59HH7;P18887;M0QYS5;B4DEB2 F5H8D7 F5H8D7 XRCC1 DNA repair protein XRCC1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 807.4189 2 807.418563 1612.82257 70584.07 1.0494 0.00084727 0.36658 0.00029599 1.4159 0.0011433 807.418865858801 815.433215171656 63.654 0.95906 63.654 63.13 64.089 -3.8147E-06 342 86 6 0 0 0 0.0010619 1 39524 46.3 31.881 4 0.76436 0.62995 0 14880000 7455900 7423800 6251 33 3204 3571 10246 10246 39;40 TPSKPPAQLSPSVPK 15 2 0 Phospho (STY) _TPSKPPAQLS(ph)PSVPK_ TPS(0.001)KPPAQLS(0.787)PS(0.213)VPK T(-45.11)PS(-31.15)KPPAQLS(5.68)PS(-5.68)VPK 0 0 1 1 F5H8D7;B4DTD3;B2RCY5;A0A024R0S8;Q59HH7;P18887;M0QYS5;B4DEB2 F5H8D7 F5H8D7 XRCC1 DNA repair protein XRCC1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 544.2921 3 538.614801 1612.82257 82171.77 0.83434 0.00044939 -0.031488 -1.696E-05 0.80285 0.00043243 538.614766669513 543.957583552577 63.68 1.2467 63.68 62.921 64.168 -3.8147E-06 591 112 7 0 0 0 0.00042763 1 39718 55.453 43.07 4 0.71978 0.56149 0 38296000 22285000 16010000 6252 33 3204 3571 10247 10247 39;40 TPSPKEEDEEPESPPEK 17 2 0 Phospho (STY) _TPSPKEEDEEPES(ph)PPEK_ TPSPKEEDEEPES(1)PPEK T(-37.45)PS(-37.14)PKEEDEEPES(37.14)PPEK 0 0 1 1 Q9H1E3 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 669.2838 3 668.948902 2003.82488 74040.03 0.77747 0.00052009 0.27001 0.00018062 1.0475 0.00070071 669.283151189877 674.291992235264 49.013 0.78908 49.013 48.678 49.467 0 337 59 9 0 0 0 0.00033656 1 19336 41.115 36.872 3 0.78457 0.89755 0 19210000 10686000 8524200 6253 1204 3205 3572 10248 10248 2396 TPSPKEEDEEPESPPEK 17 2 0 Phospho (STY) _TPSPKEEDEEPES(ph)PPEK_ TPSPKEEDEEPES(1)PPEK T(-83.49)PS(-70.55)PKEEDEEPES(70.55)PPEK 0 0 1 1 Q9H1E3 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1002.9207 2 1002.91972 2003.82488 61761.62 0.38464 0.00038576 0.24124 0.00024194 0.62588 0.00062771 1003.42154688573 1010.93398974863 49.004 0.78535 49.004 48.61 49.395 0 271 58 6 0 0 0 5.9473E-13 1 19451 99.891 93.321 3 0.74126 0.84185 0 18223000 10487000 7736700 6254 1204 3205 3572 10249 10249 2396 TPSPKEEDEEPESPPEK 17 2 0 Phospho (STY) _TPSPKEEDEEPES(ph)PPEK_ TPSPKEEDEEPES(1)PPEK T(-59.73)PS(-46.08)PKEEDEEPES(46.08)PPEK 0 0 1 1 Q9H1E3 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 668.9489 3 668.948902 2003.82488 73863.7 0.87762 0.00058708 0.98665 0.00066002 1.8643 0.0012471 669.284663490311 674.626605807906 27.553 1.0287 27.553 26.983 28.012 0 260 67 7 0 0 0 1.9168E-05 1 13443 63.225 63.225 3 0.17063 0.13735 0 27438000 24525000 2912600 6255 1204 3205 3572 10250 10250 2396 TPSPPPFR 8 0 1 Phospho (STY) _TPS(ph)PPPFR_ TPS(1)PPPFR T(-38.04)PS(38.04)PPPFR 0 0 1 0 H0YGP9;E1B6W4;Q9P068;Q7L4I2 H0YGP9 H0YGP9 RSRC2 Arginine/serine-rich coiled-coil protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 494.7305 2 489.725868 977.437182 89053.84 0.61068 0.00029907 -0.098916 -4.8442E-05 0.51177 0.00025063 489.725760243055 494.729983736405 64.605 1.668 64.605 63.933 65.601 0 396 147 5 0 0 0 0.011686 3 40084 61.56 30.671 2 0.66722 0.52909 0 13305000 7085100 6220200 6256 780 3206 3573 10251;10252;10253 10252 1322;2815 TPSPPPPIPEDIALGK 16 1 0 Phospho (STY) _TPS(ph)PPPPIPEDIALGK_ T(0.07)PS(0.93)PPPPIPEDIALGK T(-11.21)PS(11.21)PPPPIPEDIALGK 0 0 1 0 Q5T200;Q6PJ96;A0PJJ2 Q5T200 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 858.9424 2 854.931503 1707.84845 66213.64 0.76976 0.00065809 0.49371 0.00042209 1.2635 0.0010802 854.931845836634 858.939093155698 116.43 0.69142 116.44 116.12 116.82 7.6294E-06 372 62 8 0 0 0 9.0062E-07 2 69479 79.652 71.139 2 0.87832 1.1036 0 54335000 29098000 25237000 6257 1102 3207 3574 10254;10255 10255 2085;2946 TPTAPAVNLAGAR 13 0 1 Phospho (STY) _T(ph)PTAPAVNLAGAR_ T(0.986)PT(0.014)APAVNLAGAR T(18.64)PT(-18.64)APAVNLAGAR 0 0 1 0 A0A140VK53;Q9UQ35;O60382;A0AUK8 A0A140VK53 A0A140VK53 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 659.8297 2 659.829384 1317.64421 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.664 1 81.664 81.164 82.164 0 0 0 0 0.00089052 1 43494 61.11 51.199 2 6258 383 3208 3575 10256 10256 2706 TPTCQSSTDCSPYAR 15 0 1 Phospho (STY) _TPTCQSSTDCS(ph)PYAR_ TPTCQSS(0.001)T(0.004)DCS(0.994)PYAR T(-118.24)PT(-95.78)CQS(-46.62)S(-29.4)T(-23.59)DCS(23.59)PY(-42.63)AR 0 0 1 0 O95235 O95235 O95235 KIF20A Kinesin-like protein KIF20A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 910.8474 2 905.842233 1809.66991 62745.64 0.92868 0.00084124 -0.41177 -0.000373 0.51692 0.00046825 905.8423735464 910.846430914853 26.946 0.95451 26.946 26.554 27.509 0 350 57 11 0 0 0 5.2423E-28 2 12883 134.93 122.64 7 1.6224 1.0541 0 540050000 205590000 334470000 6259 943 3209 3576 10257;10258 10257 1624 TPTGEGLLDSPSK 13 1 0 Phospho (STY) _TPTGEGLLDS(ph)PSK_ TPTGEGLLDS(0.961)PS(0.039)K T(-92.43)PT(-65.6)GEGLLDS(13.88)PS(-13.88)K 0 0 1 0 O95425;A0A0J9YWY6;Q659E9;B4E3H1 O95425;Q659E9 O95425 SVIL;DKFZp586H1823 Supervillin ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 691.3154 2 691.315972 1380.61739 NaN NaN NaN -0.46005 -0.00031804 NaN NaN NaN NaN 71.309 1.1319 71.309 70.591 71.723 0 0 0 0 3.3329E-10 1 35727 97.129 75.043 4 NaN NaN 0 17972000 17972000 0 6260 948;686 3210 3577 10259 10259 1132 TPTGEGLLDSPSK 13 1 0 Phospho (STY) _TPTGEGLLDS(ph)PSK_ TPTGEGLLDS(0.877)PS(0.123)K T(-126.78)PT(-90.16)GEGLLDS(8.53)PS(-8.53)K 0 0 1 0 O95425;A0A0J9YWY6;Q659E9;B4E3H1 O95425;Q659E9 O95425 SVIL;DKFZp586H1823 Supervillin ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 695.3245 2 691.315972 1380.61739 NaN NaN NaN 0.16615 0.00011486 NaN NaN NaN NaN 69.092 1.566 69.092 68.297 69.863 7.6294E-06 0 0 0 7.1117E-34 2 43803 132.15 90.753 4 NaN NaN 0 49216000 0 49216000 6261 948;686 3210 3577 10260;10261 10261 1132 TPTSSPASSPLVAK 14 1 0 2 Phospho (STY) _TPTSS(ph)PAS(ph)SPLVAK_ TPTS(0.118)S(0.882)PAS(0.844)S(0.156)PLVAK T(-51.22)PT(-34.69)S(-8.74)S(8.74)PAS(7.33)S(-7.33)PLVAK 0 0 2 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 755.8381 2 751.830605 1501.64666 69811.73 0.85834 0.00064532 0.087689 6.5928E-05 0.94603 0.00071125 751.830643333979 755.837750735818 59.96 1.4883 59.96 59.198 60.687 0 633 110 8 0 0 0 1.4117E-17 4 27225 111.88 101.92 15 0.95649 1.1843 0 185890000 89986000 95906000 6262 1060 3211 3578 10262;10263;10264;10265 10264 1989;1990;1991 TPTSSPASSPLVAK 14 1 0 2 Phospho (STY) _TPTSS(ph)PAS(ph)SPLVAK_ T(0.001)PT(0.219)S(0.091)S(0.689)PAS(0.662)S(0.338)PLVAK T(-31.03)PT(-4.96)S(-8.87)S(4.96)PAS(2.93)S(-2.93)PLVAK 0 0 2 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 751.8309 2 751.830605 1501.64666 68972.77 0.93043 0.00069953 -0.21953 -0.00016505 0.7109 0.00053448 751.830455832281 755.837442698049 63.883 1.6972 63.883 63.121 64.818 -3.8147E-06 948 151 10 0 0 0 6.5462E-12 3 39537 102.38 84.11 15 2.1703 1.4492 0 294470000 93055000 201420000 6263 1060 3211 3578 10266;10267;10268 10266 1989;1990;1991 TPTSSPASSPLVAK 14 1 0 Phospho (STY) _TPTSSPASS(ph)PLVAK_ TPTS(0.001)S(0.005)PAS(0.195)S(0.8)PLVAK T(-84.25)PT(-61.7)S(-30.58)S(-22.27)PAS(-6.14)S(6.14)PLVAK 0 0 1 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 711.8475 2 711.847439 1421.68033 72189.38 0.88084 0.00062702 -1.1203 -0.00079749 -0.23947 -0.00017047 711.845994462552 715.854518300254 60.469 1.4605 60.469 59.809 61.269 0 493 102 8 0 0 0 3.4703E-33 4 27366 139.3 117.83 6 0.7407 0.92109 0 84135000 48999000 35136000 6264 1060 3211 3579 10269;10270;10271;10272 10270 1989;1990;1991 TPTSSPASSPLVAK 14 1 0 Phospho (STY) _TPTSS(ph)PASSPLVAK_ TPTS(0.016)S(0.984)PASSPLVAK T(-102.37)PT(-53.4)S(-17.81)S(17.81)PAS(-49.66)S(-56.82)PLVAK 0 0 1 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 711.8478 2 711.847439 1421.68033 73488.02 0.59502 0.00042356 -0.014481 -1.0308E-05 0.58054 0.00041325 711.847238936418 715.854600892397 66.101 1.2069 66.101 65.48 66.687 0 458 90 7 0 0 0 8.5837E-89 2 31770 185.99 154.8 6 1.0093 1.2552 0 82917000 40068000 42849000 6265 1060 3211 3579 10273;10274 10274 1989;1990;1991 TPTSSPASSPLVAK 14 1 0 Phospho (STY) _TPTSSPAS(ph)SPLVAK_ TPTSSPAS(0.5)S(0.5)PLVAK T(-108.97)PT(-68.83)S(-46.85)S(-33.54)PAS(0)S(0)PLVAK 0 0 1 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 715.8551 2 711.847439 1421.68033 72212.74 1.0725 0.00076344 -0.075198 -5.353E-05 0.99728 0.00070991 711.847337956941 715.854461883361 54.122 2.0735 54.122 53.339 55.412 -3.8147E-06 1032 176 9 0 0 0 2.5614E-33 3 33154 141.54 113.85 6 2.4945 1.6626 0 103840000 28077000 75767000 6266 1060 3211 3579 10275;10276;10277 10276 1989;1990;1991 TPTSSPASSPLVAK 14 1 0 Phospho (STY) _TPTSS(ph)PASSPLVAK_ TPT(0.002)S(0.23)S(0.768)PASSPLVAK T(-54.3)PT(-25.93)S(-5.25)S(5.25)PAS(-34.85)S(-41.09)PLVAK 0 0 1 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 715.8555 2 711.847439 1421.68033 73234.47 0.95826 0.00068213 -0.15999 -0.00011389 0.79826 0.00056824 711.846454366192 715.854618403113 60.948 1.8239 60.948 60.308 62.132 -3.8147E-06 988 167 8 0 0 0 2.2266E-17 2 37971 110.44 91.195 6 1.7012 1.1373 0 142020000 54574000 87441000 6267 1060 3211 3579 10278;10279 10279 1989;1990;1991 TPTTTPPETQQSPHLSLK 18 1 0 2 Phospho (STY) _TPTT(ph)TPPETQQS(ph)PHLSLK_ T(0.002)PT(0.299)T(0.4)T(0.299)PPET(0.308)QQS(0.692)PHLSLK T(-22.51)PT(-1.26)T(1.26)T(-1.26)PPET(-3.49)QQS(3.49)PHLS(-35.35)LK 0 0 2 0 B5BUA4;Q5FBB7 B5BUA4 B5BUA4 SGOL1 Shugoshin-like 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1062.4791 2 1061.97652 2121.93848 59280.39 0.32084 0.00034073 0.34001 0.00036108 0.66085 0.0007018 1062.47841074143 1066.48526067476 78.701 1.2882 78.701 78.093 79.381 0 763 114 9 0 0 0 5.4012E-38 2 41471 131.56 123.45 21 0.75104 0.92983 0 193400000 100560000 92842000 6268 691 3212 3580 10280;10281 10280 1141;2797;2798;2799 TPTTTPPETQQSPHLSLK 18 1 0 2 Phospho (STY) _TPTT(ph)TPPETQQS(ph)PHLSLK_ T(0.002)PT(0.415)T(0.482)T(0.1)PPET(0.064)QQS(0.935)PHLS(0.001)LK T(-23.3)PT(-0.65)T(0.65)T(-6.83)PPET(-11.72)QQS(11.72)PHLS(-29.5)LK 0 0 2 0 B5BUA4;Q5FBB7 B5BUA4 B5BUA4 SGOL1 Shugoshin-like 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 708.6553 3 708.320103 2121.93848 72260.41 0.86711 0.00061419 -0.12776 -9.0494E-05 0.73935 0.0005237 708.319804640221 710.991463605846 78.747 1.1409 78.747 78.126 79.267 0 583 100 7 0 0 0 6.4939E-11 2 41484 83.245 83.245 21 0.76799 0.95121 0 159000000 93830000 65170000 6269 691 3212 3580 10282;10283 10282 1141;2797;2798;2799 TPTTTPPETQQSPHLSLK 18 1 0 Phospho (STY) _TPTTTPPETQQS(ph)PHLSLK_ TPT(0.001)T(0.002)T(0.001)PPET(0.484)QQS(0.506)PHLS(0.006)LK T(-33.39)PT(-28.88)T(-23.94)T(-25.85)PPET(-0.2)QQS(0.2)PHLS(-19.53)LK 0 0 1 0 B5BUA4;Q5FBB7 B5BUA4 B5BUA4 SGOL1 Shugoshin-like 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 681.6642 3 681.66466 2041.97215 NaN NaN NaN NaN NaN NaN NaN NaN NaN 77.858 1 77.858 77.358 78.358 0 0 0 0 0.000722 1 40678 52.769 35.025 7 6270 691 3212 3581 10284 10284 1141;2797;2798;2799 TPTTTPPETQQSPHLSLK 18 1 0 Phospho (STY) _T(ph)PTTTPPETQQSPHLSLK_ T(0.333)PT(0.304)T(0.304)T(0.058)PPET(0.001)QQSPHLSLK T(0.39)PT(-0.39)T(-0.39)T(-7.6)PPET(-24.38)QQS(-37.89)PHLS(-45.57)LK 0 0 1 0 B5BUA4;Q5FBB7 B5BUA4 B5BUA4 SGOL1 Shugoshin-like 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 681.6238 3 681.66466 2041.97215 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.417 1 79.417 78.917 79.917 0 0 0 0 0.0027162 1 41856 46.178 34.556 7 6271 691 3212 3581 10285 10285 1141;2797;2798;2799 TPTTTPPETQQSPHLSLK 18 1 0 Phospho (STY) _TPTTT(ph)PPETQQSPHLSLK_ T(0.011)PT(0.179)T(0.179)T(0.63)PPETQQSPHLSLK T(-17.51)PT(-5.46)T(-5.46)T(5.46)PPET(-33.51)QQS(-45.92)PHLS(-58.11)LK 0 0 1 0 B5BUA4;Q5FBB7 B5BUA4 B5BUA4 SGOL1 Shugoshin-like 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 684.3365 3 681.66466 2041.97215 73385.69 0.9662 0.00065862 -0.5538 -0.00037751 0.4124 0.00028112 681.998374396846 684.335760662336 73.994 0.84259 73.994 73.617 74.459 0 387 68 9 0 0 0 7.3713E-07 1 46835 67.76 67.76 7 1.3786 0.91397 0 74631000 25906000 48726000 6272 691 3212 3581 10286 10286 1141;2797;2798;2799 TPVDESDDEIQHDEIPTGK 19 1 0 Phospho (STY) _TPVDES(ph)DDEIQHDEIPTGK_ TPVDES(0.994)DDEIQHDEIPT(0.006)GK T(-37.26)PVDES(22.02)DDEIQHDEIPT(-22.02)GK 0 0 1 0 A0A087WX60;Q86TC9 A0A087WX60 A0A087WX60 MYPN Myopalladin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 738.6526 3 735.645882 2203.91582 70794.62 0.83786 0.00061637 -0.4726 -0.00034767 0.36526 0.0002687 735.979424501618 738.317166405758 74.041 0.99185 74.041 73.624 74.616 0 418 85 7 0 0 0 2.7575E-05 2 37594 49.106 45.878 3 1.8835 2.386 0 42844000 20014000 22830000 6273 262 3213 3582 10287;10288 10287 421 TPVDESDDEIQHDEIPTGK 19 1 0 Phospho (STY) _TPVDES(ph)DDEIQHDEIPTGK_ T(0.279)PVDES(0.721)DDEIQHDEIPTGK T(-4.13)PVDES(4.13)DDEIQHDEIPT(-34.54)GK 0 0 1 0 A0A087WX60;Q86TC9 A0A087WX60 A0A087WX60 MYPN Myopalladin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1102.9639 2 1102.96519 2203.91582 58336.94 0.31512 0.00034756 -0.33773 -0.0003725 -0.02261 -2.4938E-05 1103.46589599702 1106.97185533273 74.083 0.95054 74.083 73.613 74.564 0 353 82 6 0 0 0 0.00028346 2 37904 42.317 38.349 3 1.655 2.1003 0 38931000 14798000 24133000 6274 262 3213 3582 10289;10290 10290 421 TPVEPEVAIHR 11 0 1 Unmodified _TPVEPEVAIHR_ 0 0 0 0 E5RIP1;E5RJX2;P60866 E5RIP1 E5RIP1 RPS20 40S ribosomal protein S20 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 416.5646 3 416.562938 1246.66699 96420.39 0.1655 6.894E-05 0.24511 0.0001021 0.41061 0.00017104 416.563192510499 419.898999769179 82.59 0.51416 82.59 82.464 82.978 0 88 49 4 0 0 0 0.0083993 2 44135 41.598 31.289 1 1.4602 1.7964 0 24417000 10073000 14344000 6275 785 3214 3583 10291;10292 10291 TPVQYSQQQNSPQK 14 1 0 Phospho (STY) _TPVQYSQQQNS(ph)PQK_ TPVQYSQQQNS(1)PQK T(-162.06)PVQY(-114)S(-59.49)QQQNS(59.49)PQK 0 0 1 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 860.8928 2 856.885616 1711.75668 65619.22 0.89339 0.00076553 -0.14079 -0.00012064 0.7526 0.00064489 856.885706369976 860.892608391193 25.215 0.37973 25.215 25.043 25.423 0 89 18 7 0 0 0 3.2986E-62 1 11441 171.15 153.35 4 3.0404 1.9767 0 33179000 8364200 24815000 6276 994 3215 3584 10293 10293 1796 TQASSSFQDSSQPAGK 16 1 0 Unmodified _TQASSSFQDSSQPAGK_ 0 0 0 0 P46087 P46087 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 813.3748 2 813.373723 1624.73289 69563.73 0.83232 0.00067698 -0.42571 -0.00034626 0.4066 0.00033072 813.373282139043 817.380378204981 43.981 0.60101 43.981 43.652 44.253 0 144 43 5 0 0 0 0.00028091 1 16190 64.65 58.547 1 0.96035 1.1177 0 2914700 1506600 1408100 6277 995 3216 3585 10294 10294 TQGYLESPK 9 1 0 Phospho (STY) _TQGYLES(ph)PK_ TQGYLES(1)PK T(-50.77)QGY(-34.62)LES(34.62)PK 0 0 1 0 B2R8U0;P17544 B2R8U0 B2R8U0 ATF7 Cyclic AMP-dependent transcription factor ATF-7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 551.7451 2 551.744454 1101.47436 83719.04 0.40036 0.0002209 0.14624 8.0687E-05 0.5466 0.00030159 551.744536725306 555.751414709315 50.789 1.06 50.789 50.316 51.376 0 186 87 4 0 0 0 0.010489 1 20469 56.087 43.51 3 0.45239 0.53618 0 5787500 3712100 2075400 6278 543 3217 3586 10295 10295 904 TQIVTEIISEIR 12 0 1 Unmodified _TQIVTEIISEIR_ 0 0 0 0 Q6NUR1;Q9BPX3;H0Y9Z8 Q6NUR1 Q6NUR1 NCAPG Condensin complex subunit 3 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 701.4014 2 701.401024 1400.78749 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.32 1 131.32 130.82 131.82 0 0 0 0 0.0072319 1 79880 47.559 22.122 1 6279 1119 3218 3587 10296 10296 TQIVTEIISEIR 12 0 1 Unmodified _TQIVTEIISEIR_ 0 0 0 0 Q6NUR1;Q9BPX3;H0Y9Z8 Q6NUR1 Q6NUR1 NCAPG Condensin complex subunit 3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 706.4062 2 701.401024 1400.78749 NaN NaN NaN NaN NaN NaN NaN NaN NaN 131.52 1 131.52 131.02 132.02 0 0 0 0 0.00033772 1 80002 64.439 53.609 1 6280 1119 3218 3587 10297 10297 TQLYEYLQNR 10 0 1 Unmodified _TQLYEYLQNR_ 0 0 0 0 B3KN82;Q9Y2X3;H7BZ72 B3KN82 B3KN82 NOP58 Nucleolar protein 58 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 669.3384 2 664.335684 1326.65681 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.267 1 96.267 95.767 96.767 0 0 0 0 0.019323 1 54226 45.368 19.429 1 6281 578 3219 3588 10298 10298 TQLYEYLQNR 10 0 1 Unmodified _TQLYEYLQNR_ 0 0 0 0 B3KN82;Q9Y2X3;H7BZ72 B3KN82 B3KN82 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 664.3362 2 664.335684 1326.65681 75646.49 1.1802 0.00078403 0.055485 3.6861E-05 1.2357 0.00082089 664.335531663029 669.33988737809 89.228 1.1074 89.228 88.596 89.703 0 342 107 4 0 0 0 0.029748 1 57298 55.567 44.416 1 0.99861 0.79243 0 9732100 4330700 5401400 6282 578 3219 3588 10299 10299 TQMAEVLPSPR 11 0 1 Oxidation (M),Phospho (STY) _TQM(ox)AEVLPS(ph)PR_ TQM(1)AEVLPSPR TQMAEVLPS(1)PR TQM(179.12)AEVLPSPR T(-135.71)QMAEVLPS(135.71)PR 0 1 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 662.8027 2 662.801978 1323.5894 71537.94 0.59856 0.00039673 -0.51676 -0.00034251 0.081802 5.4219E-05 662.802460817978 667.805826805684 68.329 3.6219 68.329 67.573 71.195 0 2315 344 12 0 0 0 6.2182E-58 8 33427 179.12 156.78 2 0.81681 1.039 0 6418200000 3497900000 2920300000 6283 962 3220 3589 10300;10301;10302;10303;10304;10305;10306;10307 10301 269 1695 TQMAEVLPSPR 11 0 1 Oxidation (M),Phospho (STY) _TQM(ox)AEVLPS(ph)PR_ TQM(1)AEVLPSPR TQMAEVLPS(1)PR TQM(59.25)AEVLPSPR T(-54.8)QMAEVLPS(54.8)PR 0 1 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 668.2502 2 662.801978 1323.5894 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.779 1 72.779 72.279 73.279 0 0 0 0 0.0020677 1 36935 59.248 43.703 2 6284 962 3220 3589 10308 10308 269 1695 TQMAEVLPSPR 11 0 1 Oxidation (M),Phospho (STY) _TQM(ox)AEVLPS(ph)PR_ TQM(1)AEVLPSPR TQMAEVLPS(1)PR TQM(90.44)AEVLPSPR T(-85.99)QMAEVLPS(85.99)PR 0 1 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 667.8607 2 662.801978 1323.5894 75594.62 0.78184 0.0005182 0.29581 0.00019606 1.0776 0.00071426 662.802306028809 667.805963809164 145.27 0.15581 145.27 145.25 145.41 0 9 4 4 0 0 0 9.043E-09 1 83679 90.444 77.307 2 0.78095 0.86819 0 8945400 4905400 4040000 6285 962 3220 3589 10309 10309 269 1695 TQMAEVLPSPR 11 0 1 Oxidation (M),Phospho (STY) _TQM(ox)AEVLPS(ph)PR_ TQM(1)AEVLPSPR TQMAEVLPS(1)PR TQM(125.28)AEVLPSPR T(-101.57)QMAEVLPS(101.57)PR 0 1 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 662.8046 2 662.801978 1323.5894 71465.88 1.0996 0.00072885 -0.88367 -0.0005857 0.21597 0.00014315 662.803091188121 667.806017653375 64.592 4.9655 64.592 63.08 68.046 7.6294E-06 3485 448 13 0 0 0 9.0463E-11 9 40182 125.28 113.36 2 1.2136 0.75453 0 4835300000 2177500000 2657700000 6286 962 3220 3589 10310;10311;10312;10313;10314;10315;10316;10317;10318 10312 269 1695 TQMAEVLPSPR 11 0 1 Oxidation (M),Phospho (STY) _TQM(ox)AEVLPS(ph)PR_ TQM(1)AEVLPSPR TQMAEVLPS(1)PR TQM(55.34)AEVLPSPR T(-50.88)QMAEVLPS(50.88)PR 0 1 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 667.8051 2 662.801978 1323.5894 74153.1 1.0924 0.00072402 -2.3519 -0.0015589 -1.2596 -0.00083484 662.800046136841 667.805444110938 74.171 0.23694 74.171 73.952 74.189 0 32 19 3 0 0 0 0.0079609 1 47111 55.335 43.099 2 1.0049 0.80296 0 8814900 3761600 5053200 6287 962 3220 3589 10319 10319 269 1695 TQMAEVLPSPR 11 0 1 Oxidation (M),Phospho (STY) _TQM(ox)AEVLPS(ph)PR_ TQM(1)AEVLPSPR TQMAEVLPS(1)PR TQM(110.98)AEVLPSPR T(-102.58)QMAEVLPS(102.58)PR 0 1 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 667.8069 2 662.801978 1323.5894 72442.24 1.2476 0.00082693 -0.58976 -0.00039089 0.65787 0.00043604 662.801538553524 667.805799444745 90.26 1.9284 90.26 89.318 91.246 0 1056 183 8 0 0 0 8.8704E-09 4 57743 110.98 97.306 2 1.5768 1.0635 0 84506000 31010000 53496000 6288 962 3220 3589 10320;10321;10322;10323 10321 269 1695 TQMAEVLPSPR 11 0 1 Oxidation (M),Phospho (STY) _TQM(ox)AEVLPS(ph)PR_ TQM(1)AEVLPSPR TQMAEVLPS(1)PR TQM(69.92)AEVLPSPR T(-65.31)QMAEVLPS(65.31)PR 0 1 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 662.8018 2 662.801978 1323.5894 NaN NaN NaN 0.069699 4.6197E-05 NaN NaN NaN NaN 72.923 0.31461 72.923 72.856 73.17 0 0 0 0 0.0011294 1 46219 69.92 58.337 2 NaN NaN 0 2184300 2184300 0 6289 962 3220 3589 10324 10324 269 1695 TQMAEVLPSPR 11 0 1 Oxidation (M),Phospho (STY) _TQM(ox)AEVLPS(ph)PR_ TQM(1)AEVLPSPR TQMAEVLPS(1)PR TQM(52.89)AEVLPSPR T(-50.49)QMAEVLPS(50.49)PR 0 1 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 667.8056 2 662.801978 1323.5894 NaN NaN NaN -1.121 -0.00074302 NaN NaN NaN NaN 74.722 0.10645 74.722 74.689 74.796 -7.6294E-06 0 0 0 0.0070275 1 47548 52.891 43.113 2 NaN NaN 0 2516000 0 2516000 6290 962 3220 3589 10325 10325 269 1695 TQMAEVLPSPR 11 0 1 Oxidation (M),Phospho (STY) _TQM(ox)AEVLPS(ph)PR_ TQM(1)AEVLPSPR TQMAEVLPS(1)PR TQM(117.08)AEVLPSPR T(-105.85)QMAEVLPS(105.85)PR 0 1 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 662.8032 2 662.801978 1323.5894 NaN NaN NaN NaN NaN NaN NaN NaN NaN 67.494 1 67.494 66.994 67.994 0 0 0 0 5.1595E-05 1 42258 117.08 101.88 2 6291 962 3220 3589 10326 10326 269 1695 TQMAEVLPSPR 11 0 1 Oxidation (M),Phospho (STY) _TQM(ox)AEVLPS(ph)PR_ TQM(1)AEVLPSPR TQMAEVLPS(1)PR TQM(50.09)AEVLPSPR T(-47.69)QMAEVLPS(47.69)PR 0 1 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 662.8024 2 662.801978 1323.5894 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.412 1 70.412 69.912 70.912 0 0 0 0 0.0050698 1 44429 50.088 42.958 2 6292 962 3220 3589 10327 10327 269 1695 TQMAEVLPSPR 11 0 1 Oxidation (M),Phospho (STY) _TQM(ox)AEVLPS(ph)PR_ TQM(1)AEVLPSPR TQMAEVLPS(1)PR TQM(88.56)AEVLPSPR T(-80.05)QMAEVLPS(80.05)PR 0 1 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 667.8072 2 662.801978 1323.5894 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.299 1 71.299 70.799 71.799 0 0 0 0 0.0012454 1 45103 88.561 67.012 2 6293 962 3220 3589 10328 10328 269 1695 TQMAEVLPSPR 11 0 1 Oxidation (M),Phospho (STY) _TQM(ox)AEVLPS(ph)PR_ TQM(1)AEVLPSPR TQMAEVLPS(1)PR TQM(94.02)AEVLPSPR T(-88.54)QMAEVLPS(88.54)PR 0 1 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 662.8023 2 662.801978 1323.5894 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.857 1 71.857 71.357 72.357 -7.6294E-06 0 0 0 0.0025211 1 45506 94.023 78.822 2 6294 962 3220 3589 10329 10329 269 1695 TQMAEVLPSPR 11 0 1 Oxidation (M),Phospho (STY) _TQM(ox)AEVLPS(ph)PR_ TQM(1)AEVLPSPR TQMAEVLPS(1)PR TQM(87.5)AEVLPSPR T(-82.89)QMAEVLPS(82.89)PR 0 1 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 662.8024 2 662.801978 1323.5894 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.11 1 72.11 71.61 72.61 7.6294E-06 0 0 0 0.0010397 1 45673 87.498 74.095 2 6295 962 3220 3589 10330 10330 269 1695 TQMAEVLPSPR 11 0 1 Oxidation (M),Phospho (STY) _TQM(ox)AEVLPS(ph)PR_ TQM(1)AEVLPSPR TQMAEVLPS(1)PR TQM(71.69)AEVLPSPR T(-67.08)QMAEVLPS(67.08)PR 0 1 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 662.8033 2 662.801978 1323.5894 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.152 1 72.152 71.652 72.652 0 0 0 0 0.00040267 1 45705 71.692 58.288 2 6296 962 3220 3589 10331 10331 269 1695 TQMAEVLPSPR 11 0 1 Oxidation (M),Phospho (STY) _TQM(ox)AEVLPS(ph)PR_ TQM(1)AEVLPSPR TQMAEVLPS(1)PR TQM(72.17)AEVLPSPR T(-67.56)QMAEVLPS(67.56)PR 0 1 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 667.8063 2 662.801978 1323.5894 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.533 1 72.533 72.033 73.033 0 0 0 0 0.0003462 1 45970 72.175 51.273 2 6297 962 3220 3589 10332 10332 269 1695 TQMAEVLPSPR 11 0 1 Oxidation (M),Phospho (STY) _TQM(ox)AEVLPS(ph)PR_ TQM(1)AEVLPSPR TQMAEVLPS(1)PR TQM(63.19)AEVLPSPR T(-58.57)QMAEVLPS(58.57)PR 0 1 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 667.8068 2 662.801978 1323.5894 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.382 1 73.382 72.882 73.882 0 0 0 0 0.0014083 1 46569 63.185 47.646 2 6298 962 3220 3589 10333 10333 269 1695 TQMAEVLPSPR 11 0 1 Phospho (STY) _TQMAEVLPS(ph)PR_ TQMAEVLPS(1)PR T(-72.12)QMAEVLPS(72.12)PR 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 654.8055 2 654.80452 1307.59449 NaN NaN NaN 0.058174 3.8093E-05 NaN NaN NaN NaN 87.889 0.68756 87.889 87.466 88.154 0 0 0 0 0.00013357 1 47954 84.753 69.138 2 NaN NaN 0 11803000 11803000 0 6299 962 3220 3590 10334 10334 1695 TQMAEVLPSPR 11 0 1 Phospho (STY) _TQMAEVLPS(ph)PR_ TQMAEVLPS(1)PR T(-128.61)QMAEVLPS(128.61)PR 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 659.8098 2 654.80452 1307.59449 71867.94 1.3748 0.00090023 -0.49878 -0.0003266 0.87603 0.00057363 654.804545619204 659.808441660225 90.104 2.7238 90.104 89.269 91.993 0 1787 260 10 0 0 0 1.3236E-26 6 57677 155.14 137.68 2 1.6384 1.0661 0 502090000 191160000 310930000 6300 962 3220 3590 10335;10336;10337;10338;10339;10340 10336 1695 TQMAEVLPSPR 11 0 1 Phospho (STY) _TQMAEVLPS(ph)PR_ TQMAEVLPS(1)PR T(-49.15)QMAEVLPS(49.15)PR 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 659.8091 2 654.80452 1307.59449 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.308 1 92.308 91.808 92.808 0 0 0 0 0.0049335 1 59491 50.843 36.585 2 6301 962 3220 3590 10341 10341 1695 TQPDGTSVPGEPASPISQR 19 0 1 Phospho (STY) _TQPDGTSVPGEPAS(ph)PISQR_ TQPDGT(0.001)S(0.004)VPGEPAS(0.838)PIS(0.158)QR T(-42.75)QPDGT(-31.83)S(-23.48)VPGEPAS(7.26)PIS(-7.26)QR 0 0 1 0 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q96HN5;H0YFY6;Q7Z757;Q59HB8 A0A087WY61 A0A087WY61 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1002.9595 2 1002.45713 2002.89971 61456.46 0.33934 0.00034017 -0.14565 -0.00014601 0.19369 0.00019416 1002.95842756811 1007.46116230143 70.168 1.4696 70.168 69.426 70.896 0 1052 142 10 0 0 0 6.1384E-08 2 34760 64.967 43.409 5 0.77775 0.98414 0 341070000 194390000 146680000 6302 110 3221 3591 10342;10343 10343 152 TQPDGTSVPGEPASPISQR 19 0 1 Phospho (STY) _TQPDGTSVPGEPAS(ph)PISQR_ TQPDGTSVPGEPAS(0.948)PIS(0.051)QR T(-95.48)QPDGT(-55.5)S(-37.1)VPGEPAS(12.66)PIS(-12.66)QR 0 0 1 0 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q96HN5;H0YFY6;Q7Z757;Q59HB8 A0A087WY61 A0A087WY61 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1007.462 2 1002.45713 2002.89971 60858.48 0.3236 0.00032439 0.34597 0.00034682 0.66957 0.00067121 1002.45758186365 1007.46187026622 71.634 1.8086 71.634 70.971 72.78 0 1065 166 11 0 0 0 2.8265E-55 1 45568 146.97 128.35 5 1.5412 0.9913 0 895210000 352530000 542670000 6303 110 3221 3591 10344 10344 152 TQSRPGGPPNPPGPSPK 17 1 1 Phospho (STY) _TQSRPGGPPNPPGPS(ph)PK_ TQSRPGGPPNPPGPS(1)PK T(-52.32)QS(-49.67)RPGGPPNPPGPS(49.67)PK 0 0 1 1 B9EGQ5;M0QXA7;O95785;B3KR89 B9EGQ5 B9EGQ5 WIZ Protein Wiz MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 584.6157 3 584.280592 1749.81995 79862.58 0.43848 0.00025619 0.33354 0.00019488 0.77202 0.00045108 584.28072186712 590.622557665776 52.817 1.4526 52.817 51.998 53.451 -3.8147E-06 613 117 7 0 0 0 2.601E-05 1 22034 54.672 43.567 3 0.57937 0.66523 0 24907000 14107000 10800000 6304 731 3222 3592 10345 10345 1213 TQSRPGGPPNPPGPSPK 17 1 1 Phospho (STY) _TQSRPGGPPNPPGPS(ph)PK_ TQSRPGGPPNPPGPS(1)PK T(-70.12)QS(-64.59)RPGGPPNPPGPS(64.59)PK 0 0 1 1 B9EGQ5;M0QXA7;O95785;B3KR89 B9EGQ5 B9EGQ5 WIZ Protein Wiz MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 590.2884 3 584.280592 1749.81995 79723.67 0.72281 0.00042232 -0.082124 -4.7983E-05 0.64068 0.00037434 584.280610777526 590.287951654128 28.04 0.94396 28.04 27.564 28.508 0 381 64 8 0 0 0 3.6393E-06 2 13930 71.148 59.171 3 1.5398 1.187 0 44803000 18490000 26313000 6305 731 3222 3592 10346;10347 10347 1213 TQSRPGGPPNPPGPSPK 17 1 1 Phospho (STY) _TQSRPGGPPNPPGPS(ph)PK_ TQSRPGGPPNPPGPS(1)PK T(-42.18)QS(-42.18)RPGGPPNPPGPS(42.18)PK 0 0 1 1 B9EGQ5;M0QXA7;O95785;B3KR89 B9EGQ5 B9EGQ5 WIZ Protein Wiz MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 876.4193 2 875.91725 1749.81995 65221.2 0.85393 0.00074797 -0.18414 -0.00016129 0.66979 0.00058668 876.418570568072 884.928514706323 28.015 0.84981 28.015 27.643 28.493 1.9073E-06 301 59 7 0 0 0 0.00016791 1 13897 47.568 33.662 3 1.75 1.3404 0 25139000 10368000 14771000 6306 731 3222 3592 10348 10348 1213 TQTPPLGQTPQLGLK 15 1 0 Phospho (STY) _TQT(ph)PPLGQTPQLGLK_ T(0.007)QT(0.993)PPLGQTPQLGLK T(-21.75)QT(21.75)PPLGQT(-62.21)PQLGLK 0 0 1 0 H0Y3P2;D3DQV9;Q59G42;B4DZF2;P78344;E9PKF8;Q2TU89 H0Y3P2 H0Y3P2 EIF4G2;AAG1 Eukaryotic translation initiation factor 4 gamma 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 829.9309 2 829.929295 1657.84404 67836.4 0.87336 0.00072483 0.036536 3.0322E-05 0.9099 0.00075515 829.92924934271 833.936566642901 104.26 0.80682 104.26 103.82 104.63 0 257 58 6 0 0 0 1.328E-05 2 60254 87.148 81.177 3 0.98313 1.2011 0 19086000 8440500 10645000 6307 673 3223 3593 10349;10350 10350 2794 TQTPPVEENVTQK 13 1 0 Phospho (STY) _TQT(ph)PPVEENVTQK_ T(0.034)QT(0.966)PPVEENVTQK T(-14.58)QT(14.58)PPVEENVT(-63.05)QK 0 0 1 0 Q9P0B4;B4DSX4;Q6P1Q9 Q9P0B4 Q9P0B4 METTL2B Methyltransferase-like protein 2B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 779.8664 2 775.858535 1549.70252 69995.82 0.45631 0.00035403 0.22992 0.00017839 0.68623 0.00053242 775.858748863418 779.865737118445 53.387 0.88377 53.387 52.958 53.842 3.8147E-06 391 75 7 0 0 0 0.0068263 1 22199 72.417 63.463 3 1.6883 2.0465 0 17493000 6830400 10663000 6308 658 3224 3594 10351 10351 2792 TRDELDQFLDK 11 1 1 Unmodified _TRDELDQFLDK_ 0 0 0 1 A0A075B729;B4DEN9;B2RDN4;A8K3R2;Q14137 A0A075B729 A0A075B729 BOP1 Ribosome biogenesis protein BOP1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 690.3441 2 690.343706 1378.67286 73211.49 0.73334 0.00050626 0.055831 3.8543E-05 0.78917 0.0005448 690.343568391169 699.354958539641 121.48 1.771 121.48 120.37 122.14 -7.6294E-06 445 139 6 0 0 0 1.9308E-13 5 73205 131.17 104.06 1 0.87299 1.0119 0 28166000 15020000 13146000 6309 240 3225 3595 10352;10353;10354;10355;10356 10354 TRDELDQFLDK 11 1 1 Unmodified _TRDELDQFLDK_ 0 0 0 1 A0A075B729;B4DEN9;B2RDN4;A8K3R2;Q14137 A0A075B729 A0A075B729 BOP1 Ribosome biogenesis protein BOP1 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 699.8572 2 690.343706 1378.67286 73970.91 0.77688 0.00053631 -0.013252 -9.1483E-06 0.76363 0.00052717 690.845122400786 699.354868453617 120.91 0.74889 120.91 120.3 121.05 7.6294E-06 186 61 5 0 0 0 0.026873 1 72427 52.79 52.79 1 0.76294 0.85637 0 18532000 8534500 9997200 6310 240 3225 3595 10357 10357 TRDSSDIETAVVK 13 1 1 2 Phospho (STY) _TRDS(ph)S(ph)DIETAVVK_ T(0.398)RDS(0.659)S(0.942)DIETAVVK T(-2.47)RDS(2.47)S(10.19)DIET(-37)AVVK 0 0 2 1 B2RWP5;Q96L73;Q96MN8;Q8NB95 B2RWP5 B2RWP5 NSD1 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 799.8462 2 790.833876 1579.6532 69049.89 1.1942 0.00094441 -0.68878 -0.00054471 0.50541 0.00039969 790.833613265325 799.844957012814 67.82 1.4102 67.82 67.093 68.503 0 500 123 7 0 0 0 0.00042433 1 42364 73.252 56.62 6 1.5931 1.2155 0 19028000 6638800 12390000 6311 565 3226 3596 10358 10358 942;943 TRLEQEIATYR 11 0 2 Unmodified _TRLEQEIATYR_ 0 0 0 1 Q13092;A0A024R1X6;CON__P02533;P02533;CON__Q61782;Q14666;F5GWP8;CON__Q9QWL7;A8MT21;B4DL17;K7ERE3;CON__ENSEMBL:ENSP00000377550;CON__P35900;CON__Q9D312;CON__P08730-1;CON__Q6IFX2;CON__P19012;CON__A2A4G1;B3KVF5;CON__Q9Z2K1;CON__P08779;CON__Q3ZAW8;P35900;P19012;P08779;CON__Q04695;Q04695;CON__P13646-1;A8K2H9;A1A4E9;P13646 Q13092;CON__Q04695;CON__P13646-1 CON__Q04695 K14;KRT14;KRT17;KRT15;KRT13;KRT20;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 20;Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 13 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 690.3679 2 690.367515 1378.72048 NaN NaN NaN 0.19121 0.000132 NaN NaN NaN NaN 103.84 1.0681 103.84 103.16 104.23 0 0 0 0 6.9082E-09 1 59716 101.93 74.186 1 NaN NaN 0 26283000 26283000 0 + 6312 54;759;401 3227 3597 10359 10359 TRLEQEIATYR 11 0 2 Unmodified _TRLEQEIATYR_ 0 0 0 1 Q13092;A0A024R1X6;CON__P02533;P02533;CON__Q61782;Q14666;F5GWP8;CON__Q9QWL7;A8MT21;B4DL17;K7ERE3;CON__ENSEMBL:ENSP00000377550;CON__P35900;CON__Q9D312;CON__P08730-1;CON__Q6IFX2;CON__P19012;CON__A2A4G1;B3KVF5;CON__Q9Z2K1;CON__P08779;CON__Q3ZAW8;P35900;P19012;P08779;CON__Q04695;Q04695;CON__P13646-1;A8K2H9;A1A4E9;P13646 Q13092;CON__Q04695;CON__P13646-1 CON__Q04695 K14;KRT14;KRT17;KRT15;KRT13;KRT20;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 20;Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 13 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 460.5807 3 460.580769 1378.72048 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.26 1 103.26 102.76 103.76 0 0 0 0 0.0010952 1 59622 48.115 34.681 1 + 6313 54;759;401 3227 3597 10360 10360 TRLSPPR 7 0 2 Phospho (STY) _TRLS(ph)PPR_ T(0.001)RLS(0.999)PPR T(-30.7)RLS(30.7)PPR 0 0 1 1 A0A0S2Z4Z0;Q96PK6;B4DNG4;Q59GV2 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 453.7314 2 453.731484 905.448416 88582.95 0.33619 0.00015254 -0.0038424 -1.7434E-06 0.33235 0.0001508 453.731438654526 463.739664759738 60.532 1.0752 60.532 60.048 61.123 0 354 75 7 0 0 0 0.026453 1 27278 56.258 30.699 2 1.4228 1.7737 0 142860000 58003000 84858000 6314 354 3228 3598 10361 10361 559 TRLSPPR 7 0 2 Phospho (STY) _TRLS(ph)PPR_ T(0.016)RLS(0.984)PPR T(-17.98)RLS(17.98)PPR 0 0 1 1 A0A0S2Z4Z0;Q96PK6;B4DNG4;Q59GV2 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 463.7402 2 453.731484 905.448416 88564.22 0.30409 0.00013798 0.09337 4.2365E-05 0.39746 0.00018034 453.731472498863 463.739736650664 26.83 1.5491 26.83 26.127 27.676 0 381 86 7 0 0 0 0.023373 1 12865 60.167 27.847 2 0.96947 0.8431 0 89709000 44388000 45321000 6315 354 3228 3598 10362 10362 559 TRSPSPDDILER 12 0 2 2 Phospho (STY) _TRS(ph)PS(ph)PDDILER_ T(0.018)RS(0.982)PS(1)PDDILER T(-17.36)RS(17.36)PS(37)PDDILER 0 0 2 1 B4DZQ5;A0A024QZY5;Q13523;H0YDJ3 B4DZQ5 B4DZQ5 PRPF4B Serine/threonine-protein kinase PRP4 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 773.3213 2 773.320935 1544.62732 68596.45 0.83795 0.000648 -0.13946 -0.00010784 0.69849 0.00054016 773.320883944958 783.329125577142 81.41 1.6914 81.41 80.433 82.124 0 653 154 6 0 0 0 6.4507E-16 2 43146 119.65 85.264 3 0.7213 0.89858 0 120500000 71246000 49251000 6316 20 3229 3599 10363;10364 10363 25;26 TRSQEQEVLER 11 0 2 Phospho (STY) _TRS(ph)QEQEVLER_ T(0.075)RS(0.925)QEQEVLER T(-10.94)RS(10.94)QEQEVLER 0 0 1 1 B4DQZ7;S4R3H4;E7EQT4;Q9UKV3 B4DQZ7 B4DQZ7 ACIN1 Apoptotic chromatin condensation inducer in the nucleus ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 727.8364 2 727.835395 1453.65624 NaN NaN NaN 0.065872 4.7944E-05 NaN NaN NaN NaN 60.583 0.59648 60.583 60.402 60.998 0 0 0 0 0.011952 1 27633 63.185 46.653 2 NaN NaN 0 12380000 12380000 0 6317 652 3230 3600 10365 10365 1084 TSAAACAVTDLSDDSDFDEK 20 1 0 Phospho (STY) _TSAAACAVTDLS(ph)DDSDFDEK_ TSAAACAVT(0.009)DLS(0.979)DDS(0.013)DFDEK T(-87.16)S(-87.16)AAACAVT(-20.58)DLS(18.88)DDS(-18.88)DFDEK 0 0 1 0 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1103.4362 2 1099.42758 2196.8406 57987.61 1.0147 0.0011156 -0.088596 -9.7404E-05 0.92608 0.0010182 1099.42820180216 1103.43485883421 91.048 0.85786 91.048 90.549 91.407 0 457 75 8 0 0 0 6.744E-47 1 50032 132.74 115.52 5 0.99278 1.243 0 61535000 30982000 30553000 6318 1213 3231 3601 10366 10366 2437 TSAAACAVTDLSDDSDFDEK 20 1 0 Phospho (STY) _TSAAACAVTDLS(ph)DDSDFDEK_ TSAAACAVT(0.111)DLS(0.766)DDS(0.123)DFDEK T(-45.62)S(-45.62)AAACAVT(-8.41)DLS(7.95)DDS(-7.95)DFDEK 0 0 1 0 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1099.9294 2 1099.42758 2196.8406 58378.81 0.56907 0.00062566 -0.22583 -0.00024828 0.34325 0.00037737 1099.9287595529 1103.93598555944 96.168 1.0752 96.168 95.789 96.864 0 763 106 11 0 0 0 2.422E-07 3 61861 60.134 55.332 5 1.2189 0.81445 0 199100000 85036000 114060000 6319 1213 3231 3601 10367;10368;10369 10369 2437 TSASLEMNQGVSEER 15 0 1 Oxidation (M),Phospho (STY) _TSAS(ph)LEM(ox)NQGVSEER_ TSASLEM(1)NQGVSEER T(0.124)S(0.124)AS(0.752)LEMNQGVSEER TSASLEM(45.86)NQGVSEER T(-7.84)S(-7.84)AS(7.84)LEMNQGVS(-41.62)EER 0 1 1 0 A8K3X3;Q9H410;Q5JW53;Q4G1A1 A8K3X3 A8K3X3 DSN1 Kinetochore-associated protein DSN1 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 872.3615 2 867.356031 1732.69751 65830.91 0.76903 0.00066702 -0.18949 -0.00016436 0.57954 0.00050267 867.355715056909 872.360522113864 45.014 0.82848 45.014 44.502 45.331 3.8147E-06 258 60 6 0 0 0 0.0012101 2 16647 45.864 42.568 4 0.67079 0.73407 0 6189700 3533400 2656300 6320 455 3232 3602 10370;10371 10370 120 796 TSAVSSPLLDQQR 13 0 1 Phospho (STY) _TSAVSS(ph)PLLDQQR_ TSAVS(0.141)S(0.859)PLLDQQR T(-48.89)S(-48.89)AVS(-7.85)S(7.85)PLLDQQR 0 0 1 0 Q5T200;Q6PJ96;A0A087WX14 Q5T200 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 746.3578 2 741.35342 1480.69229 NaN NaN NaN NaN NaN NaN NaN NaN NaN 73.474 1 73.474 72.974 73.974 7.6294E-06 0 0 0 8.9384E-06 1 37449 72.496 23.073 4 6321 1102 3233 3603 10372 10372 2088 TSCRLSGGLGAGSCR 15 0 2 Phospho (STY) _TSCRLS(ph)GGLGAGSCR_ T(0.003)S(0.017)CRLS(0.981)GGLGAGSCR T(-25.75)S(-17.71)CRLS(17.71)GGLGAGS(-41.9)CR 0 0 1 1 CON__Q04695;Q04695;B4E2P9;K7EPJ9 CON__Q04695 CON__Q04695 KRT17 Keratin, type I cytoskeletal 17 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 540.233 3 540.232368 1617.67527 80200.84 0.72274 0.00039045 -0.063484 -3.4296E-05 0.65926 0.00035615 540.232372381574 546.90469393454 37.433 0.94217 37.433 37.071 38.013 0 445 82 7 0 0 0 0.00046844 2 21264 50.957 39.582 4 1.4716 1.2728 0 29862000 11411000 18451000 + 6322 759 3234 3604 10373;10374 10374 1281 TSDANETEDHLESLICK 17 1 0 Phospho (STY) _T(ph)SDANETEDHLESLICK_ T(0.5)S(0.5)DANET(0.001)EDHLESLICK T(0)S(0)DANET(-27.85)EDHLES(-42.23)LICK 0 0 1 0 F2Z2T1;A0A024R179;Q09161 F2Z2T1 F2Z2T1 NCBP1 Nuclear cap-binding protein subunit 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 681.2866 3 681.28552 2040.83473 73929.79 0.89754 0.00061148 -0.2187 -0.000149 0.67883 0.00046248 681.285339304653 683.956641678567 103.38 0.83627 103.38 102.97 103.81 -7.6294E-06 244 60 6 0 0 0 3.5684E-05 1 59664 51.888 42.23 4 1.3484 1.6741 0 24714000 11252000 13461000 6323 42 3235 3605 10375 10375 50;2618 TSDISSPIGSHR 12 0 1 Phospho (STY) _TSDISS(ph)PIGSHR_ TSDIS(0.133)S(0.773)PIGS(0.094)HR T(-61.03)S(-61.03)DIS(-7.65)S(7.65)PIGS(-9.14)HR 0 0 1 0 Q59GL0;Q13129 Q59GL0 Q59GL0 RLF Zinc finger protein Rlf MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 668.7985 2 668.798281 1335.58201 75089.8 0.64434 0.00043093 0.30825 0.00020616 0.95259 0.00063709 668.798356630826 673.802536452123 57.956 0.97086 57.956 57.381 58.352 3.8147E-06 287 77 5 0 0 0 0.00058309 2 25339 81.803 65.648 5 0.54451 0.65618 0 18649000 10100000 8549400 6324 1048 3236 3606 10376;10377 10376 1957;1958 TSDISSPIGSHR 12 0 1 Phospho (STY) _TSDIS(ph)SPIGSHR_ TSDIS(0.581)S(0.367)PIGS(0.051)HR T(-43.57)S(-41.14)DIS(1.99)S(-1.99)PIGS(-10.53)HR 0 0 1 0 Q59GL0;Q13129 Q59GL0 Q59GL0 RLF Zinc finger protein Rlf MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 668.7991 2 668.798281 1335.58201 74469.95 0.97672 0.00065323 0.13211 8.8354E-05 1.1088 0.00074158 668.798413282373 673.802396305396 31.134 0.73107 31.134 30.856 31.587 1.9073E-06 261 50 8 0 0 0 0.0086282 2 16427 53.001 33.73 5 1.536 1.0454 0 53713000 22385000 31329000 6325 1048 3236 3606 10378;10379 10378 1957;1958 TSDISSPIGSHREEQEGR 18 0 2 Phospho (STY) _TSDISS(ph)PIGSHREEQEGR_ TSDIS(0.151)S(0.812)PIGS(0.038)HREEQEGR T(-63.44)S(-63.75)DIS(-7.32)S(7.32)PIGS(-13.3)HREEQEGR 0 0 1 1 Q59GL0;Q13129 Q59GL0 Q59GL0 RLF Zinc finger protein Rlf MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 688.9724 3 688.970923 2063.89094 73124.13 0.52928 0.00036466 -0.0001961 -1.3511E-07 0.52908 0.00036452 689.305081163186 695.977378247534 66.213 0.47195 66.213 66.028 66.5 0 157 35 7 0 0 0 5.8438E-08 2 32102 72.771 63.607 5 0.55088 0.68331 0 42465000 27402000 15063000 6326 1048 3237 3607 10380;10381 10381 1957;1958 TSDISSPIGSHREEQEGR 18 0 2 Phospho (STY) _TSDISS(ph)PIGSHREEQEGR_ TSDIS(0.163)S(0.802)PIGS(0.035)HREEQEGR T(-37.76)S(-37.76)DIS(-6.93)S(6.93)PIGS(-13.55)HREEQEGR 0 0 1 1 Q59GL0;Q13129 Q59GL0 Q59GL0 RLF Zinc finger protein Rlf MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 689.3062 3 688.970923 2063.89094 71838.38 0.94056 0.00064802 0.097386 6.7096E-05 1.0379 0.00071511 688.971206286349 695.643237275075 26.483 0.75971 26.483 26.223 26.983 1.9073E-06 212 36 10 0 0 0 5.6152E-05 1 12640 46.578 39.132 5 1.4646 1.2813 0 301400000 115790000 185610000 6327 1048 3237 3607 10382 10382 1957;1958 TSETDDGVVGKSSDGEDEQQVPK 23 2 0 Phospho (STY) _TSETDDGVVGKS(ph)SDGEDEQQVPK_ TSETDDGVVGKS(0.5)S(0.5)DGEDEQQVPK T(-54.04)S(-54.04)ET(-33.64)DDGVVGKS(0)S(0)DGEDEQQVPK 0 0 1 1 D9IVD5;A0A024R241;Q16649 D9IVD5 D9IVD5 NFIL3 Nuclear factor interleukin-3-regulated protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 835.363 3 829.685065 2486.03337 65951.09 1.0208 0.00084697 -0.088828 -7.3699E-05 0.93201 0.00077327 830.019461970958 835.027595117343 42.962 1.6004 42.962 42.143 43.743 0 754 139 8 0 0 0 1.0927E-09 1 25273 59.555 51.466 5 1.1564 0.89636 0 41072000 19758000 21314000 6328 58 3238 3608 10383 10383 73;74 TSGETTHTHREPAGDGK 17 1 1 Unmodified _TSGETTHTHREPAGDGK_ 0 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 445.9606 4 445.960677 1779.8136 87879.7 0.082269 3.6689E-05 -0.47048 -0.00020981 -0.38821 -0.00017313 445.960650744386 450.466248716401 65.304 0.81271 65.304 64.908 65.721 0 404 59 10 0 0 0 0.00013289 2 31271 44.089 36.308 1 1.879 2.2647 0 205230000 67596000 137630000 6329 994 3239 3609 10384;10385 10384 TSGETTHTHREPAGDGK 17 1 1 Unmodified _TSGETTHTHREPAGDGK_ 0 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 600.2861 3 594.278477 1779.8136 78047.59 0.62038 0.00036868 -0.26252 -0.00015601 0.35786 0.00021267 594.278337757967 600.285782764197 65.298 0.588 65.298 65.052 65.64 0 198 43 6 0 0 0 1.7053E-23 3 31307 119.46 93.811 1 1.632 1.936 0 60499000 21447000 39052000 6330 994 3239 3609 10386;10387;10388 10386 TSGGDHAPDSPSGENSPAPQGR 22 0 1 Phospho (STY) _TSGGDHAPDS(ph)PSGENSPAPQGR_ TSGGDHAPDS(0.807)PS(0.179)GENS(0.014)PAPQGR T(-42.95)S(-42.95)GGDHAPDS(6.54)PS(-6.54)GENS(-17.72)PAPQGR 0 0 1 0 E9PL60;E9PII7;H0YDE3;H0YDU2;E9PRI1;Q53ES5;B3KX63;Q96NY9 E9PL60 E9PL60 MUS81 Crossover junction endonuclease MUS81 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1101.4498 2 1100.94819 2199.88183 57494.5 0.35772 0.00039383 0.41031 0.00045173 0.76803 0.00084556 1101.45011989907 1106.45444759831 20.252 0.47747 20.252 19.973 20.45 0 163 23 10 0 0 0 1.9768E-12 2 7072 66.246 49.168 5 1.0616 0.7354 0 41350000 19725000 21625000 6331 609 3240 3610 10389;10390 10390 1008 TSGGDHAPDSPSGENSPAPQGR 22 0 1 Phospho (STY) _TSGGDHAPDS(ph)PSGENSPAPQGR_ TSGGDHAPDS(0.996)PS(0.003)GENSPAPQGR T(-36.9)S(-36.9)GGDHAPDS(24.88)PS(-24.88)GENS(-71.65)PAPQGR 0 0 1 0 E9PL60;E9PII7;H0YDE3;H0YDU2;E9PRI1;Q53ES5;B3KX63;Q96NY9 E9PL60 E9PL60 MUS81 Crossover junction endonuclease MUS81 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 734.3027 3 734.30122 2199.88183 70468.68 0.72504 0.0005324 0.53174 0.00039046 1.2568 0.00092286 734.635855378005 737.637964551813 20.244 0.64055 20.244 19.956 20.596 0 221 31 12 0 0 0 1.4855E-29 1 7084 102.72 94.494 5 1.1187 0.75552 0 78874000 39739000 39135000 6332 609 3240 3610 10391 10391 1008 TSIIEAQYLR 10 0 1 Phospho (STY) _TS(ph)IIEAQYLR_ T(0.249)S(0.751)IIEAQYLR T(-4.79)S(4.79)IIEAQY(-76.48)LR 0 0 1 0 Q14690;B4DH82;B4DES7 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 642.3179 2 637.313035 1272.61152 76469.02 1.2088 0.00077037 -0.18705 -0.00011921 1.0217 0.00065116 637.312854569138 642.316967206318 106.15 1.3044 106.15 105.59 106.89 0 659 125 7 0 0 0 0.00096898 1 68467 81.09 56.935 3 1.4022 0.97417 0 39604000 16022000 23582000 6333 1061 3241 3611 10392 10392 1996 TSLPLSPVK 9 1 0 Phospho (STY) _TSLPLS(ph)PVK_ TS(0.001)LPLS(0.999)PVK T(-40.8)S(-32.16)LPLS(32.16)PVK 0 0 1 0 Q86XL3 Q86XL3 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 515.2777 2 511.270108 1020.52566 NaN NaN NaN 0.044921 2.2967E-05 NaN NaN NaN NaN 94.071 0.33522 94.071 93.915 94.25 0 0 0 0 0.009454 1 60635 58.274 33.455 3 NaN NaN 0 2949200 0 2949200 6334 1141 3242 3612 10393 10393 2188 TSPASLDFPESQK 13 1 0 Phospho (STY) _T(ph)SPASLDFPESQK_ T(0.5)S(0.5)PASLDFPESQK T(0)S(0)PAS(-37)LDFPES(-67.6)QK 0 0 1 0 Q96JM3 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 748.3364 2 743.826704 1485.63885 71610.22 0.54238 0.00040344 0.28646 0.00021307 0.82884 0.00061651 743.826964543214 747.833831153055 83.319 1.2242 83.319 82.703 83.927 7.6294E-06 481 113 6 0 0 0 0.016755 2 44305 69.01 61.443 4 0.60824 0.76245 0 59077000 33648000 25428000 6335 1180 3243 3613 10394;10395 10394 2323;2974 TSPDPSPVSAAPSK 14 1 0 Phospho (STY) _T(ph)SPDPSPVSAAPSK_ T(0.5)S(0.5)PDPSPVSAAPSK T(0)S(0)PDPS(-41.19)PVS(-51.28)AAPS(-55.45)K 0 0 1 0 Q13469;B7Z8Y1;B5B2P4 Q13469 Q13469 NFATC2 Nuclear factor of activated T-cells, cytoplasmic 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 710.8221 2 710.821422 1419.62829 76120.3 0.61533 0.00043739 0.011467 8.1508E-06 0.62679 0.00044554 710.821368796719 714.828644854132 50.836 0.81234 50.836 50.405 51.217 0 163 65 5 0 0 0 0.021219 1 20533 55.452 44.623 5 0.2549 0.30222 0 6678100 4821600 1856500 6336 1051 3244 3614 10396 10396 1960;2919 TSPEMDIQNPDDGAR 15 0 1 Oxidation (M),Phospho (STY) _T(ph)SPEM(ox)DIQNPDDGAR_ TSPEM(1)DIQNPDDGAR T(0.5)S(0.5)PEMDIQNPDDGAR TSPEM(105.03)DIQNPDDGAR T(0)S(0)PEMDIQNPDDGAR 0 1 1 0 P46013;B4DRH3 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 876.3459 2 871.340381 1740.66621 64923.64 0.57973 0.00050514 0.097593 8.5037E-05 0.67732 0.00059018 871.340848342007 876.344851250937 49.937 2.5791 49.937 48.61 51.189 0 1423 210 12 0 0 0 2.4015E-12 4 19804 105.03 90.341 2 2.1143 2.6781 0 599840000 197160000 402680000 6337 994 3245 3615 10397;10398;10399;10400 10398 283 1787;2893 TSPEMDIQNPDDGAR 15 0 1 Oxidation (M),Phospho (STY) _T(ph)SPEM(ox)DIQNPDDGAR_ TSPEM(1)DIQNPDDGAR T(0.5)S(0.5)PEMDIQNPDDGAR TSPEM(65.4)DIQNPDDGAR T(0)S(0)PEMDIQNPDDGAR 0 1 1 0 P46013;B4DRH3 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 876.8473 2 871.340381 1740.66621 NaN NaN NaN -0.029476 -2.5684E-05 NaN NaN NaN NaN 46.664 1.017 46.664 46.092 47.109 0 0 0 0 0.00032592 1 17691 65.395 54.91 2 NaN NaN 0 11956000 0 11956000 6338 994 3245 3615 10401 10401 283 1787;2893 TSPEMDIQNPDDGAR 15 0 1 Oxidation (M),Phospho (STY) _T(ph)SPEM(ox)DIQNPDDGAR_ TSPEM(1)DIQNPDDGAR T(0.5)S(0.5)PEMDIQNPDDGAR TSPEM(68.07)DIQNPDDGAR T(0)S(0)PEMDIQNPDDGAR 0 1 1 0 P46013;B4DRH3 P46013 P46013 MKI67 Antigen KI-67 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 876.3454 2 871.340381 1740.66621 NaN NaN NaN 0.25454 0.00022179 NaN NaN NaN NaN 48.04 0.61216 48.04 47.795 48.407 0 0 0 0 0.00038702 1 18720 68.069 50.633 2 NaN NaN 0 3018700 0 3018700 6339 994 3245 3615 10402 10402 283 1787;2893 TSPEMDIQNPDDGAR 15 0 1 Oxidation (M),Phospho (STY) _T(ph)SPEM(ox)DIQNPDDGAR_ TSPEM(1)DIQNPDDGAR T(0.5)S(0.5)PEMDIQNPDDGAR TSPEM(53.25)DIQNPDDGAR T(0)S(0)PEMDIQNPDDGAR 0 1 1 0 P46013;B4DRH3 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 876.3456 2 871.340381 1740.66621 66353.45 0.99197 0.00086435 -0.23125 -0.0002015 0.76072 0.00066285 871.339647874784 876.344437457141 41.752 0.72412 41.752 41.345 42.069 0 342 61 8 0 0 0 0.0012973 1 24301 53.252 43.819 2 3.1671 2.3675 0 21553000 4894600 16658000 6340 994 3245 3615 10403 10403 283 1787;2893 TSPEMDIQNPDDGAR 15 0 1 Oxidation (M),Phospho (STY) _T(ph)SPEM(ox)DIQNPDDGAR_ TSPEM(1)DIQNPDDGAR T(0.5)S(0.5)PEMDIQNPDDGAR TSPEM(56.95)DIQNPDDGAR T(0)S(0)PEMDIQNPDDGAR 0 1 1 0 P46013;B4DRH3 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 876.3461 2 871.340381 1740.66621 64551.41 0.86848 0.00075674 -0.070815 -6.1704E-05 0.79766 0.00069503 871.341049058013 876.344594206617 45.372 1.9124 45.372 44.715 46.627 0 907 173 8 0 0 0 0.0012282 1 26683 56.951 47.296 2 2.655 1.7127 0 773470000 231160000 542320000 6341 994 3245 3615 10404 10404 283 1787;2893 TSPEMDIQNPDDGAR 15 0 1 Phospho (STY) _T(ph)SPEMDIQNPDDGAR_ T(0.5)S(0.5)PEMDIQNPDDGAR T(0)S(0)PEMDIQNPDDGAR 0 0 1 0 P46013;B4DRH3 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 863.3426 2 863.342923 1724.67129 65034.05 1.0753 0.00092835 -0.42031 -0.00036288 0.65498 0.00056547 863.342564688311 868.346981076682 68.278 1.2722 68.278 67.699 68.971 0 689 114 9 0 0 0 0.00058854 2 42802 73.466 64.278 2 3.6815 2.48 0 89676000 19556000 70120000 6342 994 3245 3616 10405;10406 10405 1787;2893 TSPKPAVVETVTTAK 15 2 0 Phospho (STY) _T(ph)SPKPAVVETVTTAK_ T(0.5)S(0.5)PKPAVVETVTTAK T(0)S(0)PKPAVVET(-51.05)VT(-54.8)T(-55.86)AK 0 0 1 1 A8K492;P56192;H0YI94;H0YIP0 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 804.9169 2 804.915853 1607.81715 68418.79 0.71538 0.00057582 0.096337 7.7544E-05 0.81172 0.00065336 804.916031120105 812.930039565086 74.088 0.92991 74.088 73.624 74.554 0 390 80 7 0 0 0 0.0018569 1 37858 61.235 52.654 5 2.5499 3.2476 0 82218000 28258000 53960000 6343 457 3246 3617 10407 10407 797;2734 TSPKPAVVETVTTAK 15 2 0 Phospho (STY) _T(ph)SPKPAVVETVTTAK_ T(0.5)S(0.5)PKPAVVETVTTAK T(0)S(0)PKPAVVET(-46.83)VT(-49.4)T(-49.12)AK 0 0 1 1 A8K492;P56192;H0YI94;H0YIP0 A8K492 A8K492 MARS Methionine--tRNA ligase, cytoplasmic MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 804.9164 2 804.915853 1607.81715 67798.71 1.0843 0.00087279 0.032702 2.6322E-05 1.117 0.00089911 804.915776167496 812.930062813746 64.267 2.4763 64.267 62.771 65.247 0 1166 224 7 0 0 0 0.0020885 1 39852 53.034 47.062 5 1.2075 0.90604 0 79482000 36025000 43458000 6344 457 3246 3617 10408 10408 797;2734 TSPLVSQNNEQGSTLR 16 0 1 Phospho (STY) _T(ph)SPLVSQNNEQGSTLR_ T(0.5)S(0.5)PLVS(0.001)QNNEQGSTLR T(0)S(0)PLVS(-27.41)QNNEQGS(-41.75)T(-41.75)LR 0 0 1 0 B7ZLC8;Q15652;H7BXU7 B7ZLC8 B7ZLC8 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 910.9266 2 905.920187 1809.82582 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.009 1 62.009 61.509 62.509 3.8147E-06 0 0 0 0.015423 1 28825 42.095 28.668 5 6345 722 3247 3618 10409 10409 1193;2805 TSQDYQALTVHDNLAMK 17 1 0 Oxidation (M),Phospho (STY) _T(ph)SQDYQALTVHDNLAM(ox)K_ TSQDYQALTVHDNLAM(1)K T(0.486)S(0.486)QDY(0.027)QALTVHDNLAMK TSQDYQALTVHDNLAM(57.53)K T(0)S(0)QDY(-12.53)QALT(-43.82)VHDNLAMK 0 1 1 0 Q6NUR1;Q9BPX3 Q6NUR1 Q6NUR1 NCAPG Condensin complex subunit 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 677.6344 3 677.634483 2029.88162 74830.66 0.53522 0.00036268 -0.24631 -0.00016691 0.28891 0.00019577 677.968713867354 680.305733453475 82.901 1.389 82.901 82.065 83.454 0 595 128 8 0 0 0 2.0567E-05 2 44186 57.525 51.258 4 0.91681 1.1422 0 73423000 37068000 36355000 6346 1119 3248 3619 10410;10411 10410 317 2126;2952 TSQPPVPQGEAEEDSQGK 18 1 0 Phospho (STY) _TSQPPVPQGEAEEDS(ph)QGK_ TSQPPVPQGEAEEDS(1)QGK T(-54.46)S(-54.46)QPPVPQGEAEEDS(54.46)QGK 0 0 1 0 Q6AHZ7;Q12789;Q6AWA4 Q6AHZ7 Q6AHZ7 DKFZp686A111;GTF3C1;DKFZp686O0870 General transcription factor 3C polypeptide 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 982.9203 2 982.417674 1962.82079 60370.45 0.5779 0.00056774 0.28526 0.00028025 0.86316 0.00084798 982.417831214543 986.425275567179 47.34 1.2496 47.34 46.685 47.934 0 663 84 10 0 0 0 6.6844E-06 1 18449 57.173 48.077 3 0.65819 0.81836 0 85805000 51629000 34176000 6347 1044 3249 3620 10412 10412 1950 TSQVGAASAPAKESPRK 17 2 1 Phospho (STY) _TSQVGAASAPAKES(ph)PRK_ TSQVGAAS(0.013)APAKES(0.987)PRK T(-136.48)S(-136.48)QVGAAS(-18.77)APAKES(18.77)PRK 0 0 1 2 J3KQ96;E7ETY2;Q13428 J3KQ96 J3KQ96 TCOF1 Treacle protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 589.2943 3 588.959519 1763.85673 77603.48 0.85315 0.00050247 -0.21311 -0.00012551 0.64004 0.00037696 588.959486766949 597.638321852009 16.378 0.59556 16.378 16.237 16.833 0 84 20 8 0 0 0 1.1069E-43 3 3737 140.2 140.2 4 1.7686 1.4488 0 77368000 29633000 47735000 6348 792 3250 3621 10413;10414;10415 10415 1356 TSSAQVEGGVHSLHSYEK 18 1 0 Unmodified _TSSAQVEGGVHSLHSYEK_ 0 0 0 0 H0Y4R1;P12268 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 641.9825 3 639.309666 1914.90717 75674.39 1.428 0.00091295 -0.077043 -4.9254E-05 1.351 0.00086369 639.643991573575 641.98099086064 91.425 1.0413 91.425 90.918 91.959 0 497 88 9 0 0 0 3.9206E-07 2 50302 70.96 64.232 1 1.2537 1.5524 0 181650000 82266000 99381000 6349 850 3251 3622 10416;10417 10416 TSSAQVEGGVHSLHSYEK 18 1 0 Unmodified _TSSAQVEGGVHSLHSYEK_ 0 0 0 0 H0Y4R1;P12268 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 481.7376 4 479.734069 1914.90717 86552.54 1.0319 0.00049502 0.15686 7.525E-05 1.1887 0.00057027 479.733914000517 481.737377915501 91.416 0.70325 91.416 91.078 91.781 0 306 57 9 0 0 0 0.0018146 1 50345 31.138 31.138 1 1.1844 1.4696 0 112200000 51976000 60224000 6350 850 3251 3622 10418 10418 TSSAVWNSPPLQGAR 15 0 1 Phospho (STY) _TSSAVWNS(ph)PPLQGAR_ TSSAVWNS(1)PPLQGAR T(-92.94)S(-92.94)S(-74.66)AVWNS(74.66)PPLQGAR 0 0 1 0 Q9NQS7 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 830.8896 2 825.885419 1649.75628 65894.09 0.70813 0.00058483 -0.16781 -0.00013859 0.54031 0.00044624 825.885317266663 830.889433578213 91.929 2.6031 91.929 90.112 92.715 7.6294E-06 1420 230 10 0 0 0 3.5146E-76 6 50744 183.81 169.34 4 0.87206 1.1054 0 896340000 483890000 412450000 6351 1212 3252 3623 10419;10420;10421;10422;10423;10424 10422 2434 TSSAVWNSPPLQGAR 15 0 1 Phospho (STY) _TSSAVWNS(ph)PPLQGAR_ TSSAVWNS(1)PPLQGAR T(-58.91)S(-58.91)S(-54.95)AVWNS(54.95)PPLQGAR 0 0 1 0 Q9NQS7 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 830.8914 2 825.885419 1649.75628 65746.68 0.82217 0.00067902 0.24441 0.00020185 1.0666 0.00088087 825.885634971467 830.889747547768 95.045 2.151 95.045 93.714 95.865 0 1166 203 8 0 0 0 7.3017E-06 4 60728 81.632 70.37 4 2.0028 1.3385 0 133170000 48294000 84873000 6352 1212 3252 3623 10425;10426;10427;10428 10425 2434 TSSDDESEEDEDDLLQR 17 0 1 Phospho (STY) _T(ph)SSDDESEEDEDDLLQR_ T(0.312)S(0.312)S(0.312)DDES(0.064)EEDEDDLLQR T(0)S(0)S(0)DDES(-6.89)EEDEDDLLQR 0 0 1 0 Q9Y5J1;B2RAX6 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1031.8851 2 1031.88406 2061.75356 60337.47 0.59798 0.00061704 -0.077525 -7.9997E-05 0.52045 0.00053705 1031.88377366203 1036.88767295398 75.654 0.78757 75.654 75.154 75.942 0 220 66 5 0 0 0 0.00029596 3 39111 65.563 65.563 4 0.85035 1.0452 0 29451000 16107000 13344000 6353 1255 3253 3624 10429;10430;10431 10430 2583;2584;2585;3008 TSSDDESEEDEDDLLQR 17 0 1 Phospho (STY) _TSSDDES(ph)EEDEDDLLQR_ TSSDDES(1)EEDEDDLLQR T(-73.15)S(-73.15)S(-42.55)DDES(42.55)EEDEDDLLQR 0 0 1 0 Q9Y5J1;B2RAX6 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1037.3909 2 1031.88406 2061.75356 NaN NaN NaN -0.1813 -0.00018708 NaN NaN NaN NaN 74.131 1.2371 74.131 73.528 74.765 0 0 0 0 3.2241E-82 3 38059 159.13 134.66 4 NaN NaN 0 47954000 0 47954000 6354 1255 3253 3624 10432;10433;10434 10434 2583;2584;2585;3008 TSSDDESEEDEDDLLQR 17 0 1 Phospho (STY) _T(ph)SSDDESEEDEDDLLQR_ T(0.316)S(0.316)S(0.253)DDES(0.115)EEDEDDLLQR T(0)S(0)S(-0.96)DDES(-4.37)EEDEDDLLQR 0 0 1 0 Q9Y5J1;B2RAX6 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1036.8912 2 1031.88406 2061.75356 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.291 1 75.291 74.791 75.791 0 0 0 0 0.0032057 1 38713 53.034 44.93 4 6355 1255 3253 3624 10435 10435 2583;2584;2585;3008 TSSDDESEEDEDDLLQR 17 0 1 2 Phospho (STY) _TSS(ph)DDES(ph)EEDEDDLLQR_ T(0.026)S(0.03)S(0.946)DDES(0.998)EEDEDDLLQR T(-15.86)S(-15.12)S(15.12)DDES(32.59)EEDEDDLLQR 0 0 2 0 Q9Y5J1;B2RAX6 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1076.8724 2 1071.86722 2141.71989 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.987 1 80.987 80.487 81.487 0 0 0 0 3.7413E-07 1 43007 82.01 68.104 6 6356 1255 3253 3625 10436 10436 2583;2584;2585;3008 TSSDDESEEDEDDLLQR 17 0 1 2 Phospho (STY) _TSS(ph)DDES(ph)EEDEDDLLQR_ T(0.291)S(0.337)S(0.392)DDES(0.98)EEDEDDLLQR T(-1.35)S(-0.68)S(0.68)DDES(17.59)EEDEDDLLQR 0 0 2 0 Q9Y5J1;B2RAX6 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1076.8715 2 1071.86722 2141.71989 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.778 1 81.778 81.278 82.278 0 0 0 0 3.4605E-07 1 43573 81.317 65.93 6 6357 1255 3253 3625 10437 10437 2583;2584;2585;3008 TSSDDESEEDEDDLLQR 17 0 1 2 Phospho (STY) _T(ph)SSDDES(ph)EEDEDDLLQR_ T(0.385)S(0.385)S(0.314)DDES(0.917)EEDEDDLLQR T(0)S(0)S(-1.05)DDES(10.74)EEDEDDLLQR 0 0 2 0 Q9Y5J1;B2RAX6 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1076.8717 2 1071.86722 2141.71989 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.261 1 91.261 90.761 91.761 0 0 0 0 0.00023843 1 58815 60.161 51.857 6 6358 1255 3253 3625 10438 10438 2583;2584;2585;3008 TSSEDNLYLAVLR 13 0 1 Phospho (STY) _T(ph)SSEDNLYLAVLR_ T(0.365)S(0.365)S(0.271)EDNLYLAVLR T(0)S(0)S(-1.29)EDNLY(-53.38)LAVLR 0 0 1 0 Q8WXV6 Q8WXV6 Q8WXV6 PLEC1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 780.8699 2 780.868903 1559.72325 71287.46 1.0017 0.00078218 -0.39027 -0.00030475 0.61141 0.00047743 780.868525549305 785.872814930323 125 0.78755 125 124.67 125.45 0 360 74 7 0 0 0 0.00054872 2 75603 87.913 87.913 4 1.2514 1.5386 0 27896000 11782000 16115000 6359 1168 3254 3626 10439;10440 10440 2278;2279;2971 TSSEDNLYLAVLR 13 0 1 Phospho (STY) _TSS(ph)EDNLYLAVLR_ T(0.135)S(0.135)S(0.73)EDNLYLAVLR T(-7.33)S(-7.33)S(7.33)EDNLY(-59.9)LAVLR 0 0 1 0 Q8WXV6 Q8WXV6 Q8WXV6 PLEC1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 785.8738 2 780.868903 1559.72325 68556.67 1.0613 0.00082872 0.12855 0.00010038 1.1898 0.00092911 780.86894995864 785.873200465478 133.78 0.76807 133.78 133.39 134.16 0 372 73 8 0 0 0 6.7711E-10 1 86196 104.22 83.637 4 4.1229 2.901 0 32859000 6114800 26744000 6360 1168 3254 3626 10441 10441 2278;2279;2971 TSSIADEGTYTLDSILR 17 0 1 Phospho (STY) _TSS(ph)IADEGTYTLDSILR_ T(0.087)S(0.087)S(0.826)IADEGTYTLDSILR T(-9.79)S(-9.79)S(9.79)IADEGT(-55.59)Y(-66.1)T(-74.86)LDS(-90.68)ILR 0 0 1 0 E7ERV5;B5LY56;Q59FF5;A8CDT9;A0A087WY00;G3V394;F8WE88;F8W6H6;Q9Y4I1 E7ERV5 E7ERV5 MYO5A Unconventional myosin-Va MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 961.9465 2 961.44316 1920.87177 61493.53 0.65124 0.00062613 0.076476 7.3528E-05 0.72771 0.00069965 961.945130579455 966.94862396696 128.92 0.87991 128.92 128.69 129.57 0 341 74 7 0 0 0 3.7294E-12 3 78265 96.163 81.132 7 1.7061 2.1344 0 39949000 15165000 24784000 6361 264 3255 3627 10442;10443;10444 10443 423 TSSSSPANSDVEIDGIGR 18 0 1 Phospho (STY) _T(ph)SSSSPANSDVEIDGIGR_ T(0.2)S(0.2)S(0.2)S(0.2)S(0.2)PANS(0.001)DVEIDGIGR T(0)S(0)S(0)S(0)S(0)PANS(-25.64)DVEIDGIGR 0 0 1 0 O60293 O60293 O60293 ZFC3H1 Zinc finger C3H1 domain-containing protein MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 941.4099 2 936.404567 1870.79458 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.965 1 80.965 80.465 81.465 0 0 0 0 0.00081394 1 42989 61.375 51.845 6 6362 929 3256 3628 10445 10445 1573;1574;1575;1576;1577;2845 TSSSSPANSDVEIDGIGR 18 0 1 2 Phospho (STY) _TSSSS(ph)PANS(ph)DVEIDGIGR_ T(0.174)S(0.191)S(0.19)S(0.231)S(0.256)PANS(0.958)DVEIDGIGR T(-1.83)S(-1.39)S(-1.39)S(-0.47)S(0.47)PANS(17.4)DVEIDGIGR 0 0 2 0 O60293 O60293 O60293 ZFC3H1 Zinc finger C3H1 domain-containing protein MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 976.3904 2 976.387732 1950.76091 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.849 1 84.849 84.349 85.349 7.6294E-06 0 0 0 0.0027166 1 45739 47.09 33.185 15 6363 929 3256 3629 10446 10446 1573;1574;1575;1576;1577;2845 TSSVSSISQVSPER 14 0 1 Phospho (STY) _TSSVSSISQVS(ph)PER_ TSSVS(0.001)S(0.002)IS(0.187)QVS(0.81)PER T(-43.11)S(-43.11)S(-43.11)VS(-27.89)S(-26.04)IS(-6.37)QVS(6.37)PER 0 0 1 0 D3DX33;B4DYG5;Q4LE69;P42356 D3DX33 D3DX33 hCG_1999854;PIK4CA variant protein;PI4KA Phosphatidylinositol 4-kinase alpha MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 777.359 2 772.353617 1542.69268 NaN NaN NaN NaN NaN NaN NaN NaN NaN 61.385 1 61.385 60.885 61.885 3.8147E-06 0 0 0 6.194E-05 1 28278 56.527 43.967 7 6364 670 3257 3630 10447 10447 1113 TSTTGVATTQSPTPR 15 0 1 Phospho (STY) _TSTTGVATTQS(ph)PTPR_ TSTTGVAT(0.007)T(0.065)QS(0.714)PT(0.214)PR T(-41.3)S(-41.3)T(-41.3)T(-43.69)GVAT(-20.36)T(-10.38)QS(5.23)PT(-5.23)PR 0 0 1 0 E9PMS6;B7Z8W3;A0A1P7ZIM8;A0A0A0MTE2;E9PMT2;F8WD26;F8J2B5;J3KP06;Q8WWI1 E9PMS6 E9PMS6 LMO7 LIM domain only protein 7 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 797.8748 2 792.866892 1583.71923 NaN NaN NaN 2.3931 0.0018974 NaN NaN NaN NaN 42.755 0.61552 42.755 42.437 43.052 0 0 0 0 0.00015435 1 15397 62.104 41.868 8 NaN NaN 0 2616200 0 2616200 6365 391 3258 3631 10448 10448 669;2709 TSTTGVATTQSPTPR 15 0 1 Phospho (STY) _TSTTGVATT(ph)QSPTPR_ TSTTGVAT(0.141)T(0.543)QS(0.265)PT(0.05)PR T(-52.51)S(-52.51)T(-52.12)T(-46.59)GVAT(-5.85)T(3.11)QS(-3.11)PT(-10.32)PR 0 0 1 0 E9PMS6;B7Z8W3;A0A1P7ZIM8;A0A0A0MTE2;E9PMT2;F8WD26;F8J2B5;J3KP06;Q8WWI1 E9PMS6 E9PMS6 LMO7 LIM domain only protein 7 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 798.3723 2 792.866892 1583.71923 NaN NaN NaN -0.29902 -0.00023709 NaN NaN NaN NaN 32.204 0.67115 32.204 31.833 32.504 0 0 0 0 0.00048808 1 17206 70.529 55.556 8 NaN NaN 0 14059000 0 14059000 6366 391 3258 3631 10449 10449 669;2709 TSVLEESGPSR 11 0 1 Phospho (STY) _TSVLEES(ph)GPSR_ TSVLEES(0.815)GPS(0.185)R T(-62.98)S(-62.98)VLEES(6.44)GPS(-6.44)R 0 0 1 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 621.2742 2 621.274107 1240.53366 NaN NaN NaN 0.011073 6.8794E-06 NaN NaN NaN NaN 53.937 0.45948 53.937 53.768 54.227 0 0 0 0 0.001543 1 22741 71.085 49.453 4 NaN NaN 0 3950700 3950700 0 6367 1035 3259 3632 10450 10450 1926;1927 TSVLEESGPSR 11 0 1 Phospho (STY) _TSVLEESGPS(ph)R_ TSVLEES(0.402)GPS(0.598)R T(-50.13)S(-50.13)VLEES(-1.72)GPS(1.72)R 0 0 1 0 Q03188;H0Y8J2 Q03188 Q03188 CENPC Centromere protein C MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 621.2748 2 621.274107 1240.53366 80893.66 0.87495 0.00054358 -0.37635 -0.00023381 0.4986 0.00030977 621.273569060042 626.27792217747 44.701 0.70779 44.701 44.369 45.077 0 164 65 4 0 0 0 0.0096483 1 26425 53.448 42.618 4 0.59252 0.48794 0 5925400 3504400 2421000 6368 1035 3259 3632 10451 10451 1926;1927 TSYEEFTHK 9 1 0 Unmodified _TSYEEFTHK_ 0 0 0 0 Q6P2Q9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 571.2614 2 571.261653 1140.50875 81158.32 0.59805 0.00034164 -0.094536 -5.4005E-05 0.50351 0.00028764 571.261554368542 575.268603002281 75.671 0.56791 75.671 75.384 75.952 0 215 47 6 0 0 0 0.029579 1 38924 58.981 48.994 1 0.97991 1.2358 0 48782000 26351000 22431000 6369 1121 3260 3633 10452 10452 TTHFVEGGDAGNR 13 0 1 Unmodified _TTHFVEGGDAGNR_ 0 0 0 0 A8MUD9;O95036;A0A024R814;P18124 A8MUD9 A8MUD9 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 680.8145 2 680.815647 1359.61674 NaN NaN NaN -0.030445 -2.0727E-05 NaN NaN NaN NaN 66.997 0.35876 66.997 66.809 67.168 0 0 0 0 0.00052218 1 32746 80.763 68.916 1 NaN NaN 0 9991900 9991900 0 6370 145 3261 3634 10453 10453 TTHFVEGGDAGNREDQINR 19 0 2 Unmodified _TTHFVEGGDAGNREDQINR_ 0 0 0 1 A8MUD9;O95036;A0A024R814;P18124 A8MUD9 A8MUD9 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 535.0056 4 529.750516 2114.97296 80972.98 0.32556 0.00017247 -0.042539 -2.2535E-05 0.28302 0.00014993 529.750532351032 534.754638949308 83.089 3.8955 83.089 81.45 85.345 0 1837 362 7 0 0 0 1.0375E-73 8 43725 126.19 116.61 1 0.9352 1.1727 0 584990000 287890000 297100000 6371 145 3262 3635 10454;10455;10456;10457;10458;10459;10460;10461 10456 TTHFVEGGDAGNREDQINR 19 0 2 Unmodified _TTHFVEGGDAGNREDQINR_ 0 0 0 1 A8MUD9;O95036;A0A024R814;P18124 A8MUD9 A8MUD9 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 712.6704 3 705.998262 2114.97296 71568.21 0.88707 0.00062627 -0.13112 -9.2571E-05 0.75595 0.0005337 706.332405659793 712.670412513355 82.682 1.2704 82.682 81.613 82.884 0 431 120 8 0 0 0 4.824E-22 2 43982 89.982 74.834 1 0.96992 1.2114 0 222820000 96274000 126540000 6372 145 3262 3635 10462;10463 10463 TTHFVEGGDAGNREDQINR 19 0 2 Unmodified _TTHFVEGGDAGNREDQINR_ 0 0 0 1 A8MUD9;O95036;A0A024R814;P18124 A8MUD9 A8MUD9 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 713.0051 3 705.998262 2114.97296 71283.24 0.61936 0.00043727 -0.050337 -3.5538E-05 0.56902 0.00040173 706.332390277375 712.670592113178 82.919 2.2334 82.919 82.703 84.937 0 570 203 6 0 0 0 3.1376E-73 3 45049 132.51 123.32 1 0.95033 1.1862 0 189930000 81344000 108580000 6373 145 3262 3635 10464;10465;10466 10466 TTHFVEGGDAGNREDQINR 19 0 2 Unmodified _TTHFVEGGDAGNREDQINR_ 0 0 0 1 A8MUD9;O95036;A0A024R814;P18124 A8MUD9 A8MUD9 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 712.6711 3 705.998262 2114.97296 NaN NaN NaN -0.4501 -0.00031777 NaN NaN NaN NaN 81.574 0.10175 81.574 81.512 81.613 0 0 0 0 3.3249E-05 1 43422 54.974 38.667 1 NaN NaN 0 17169000 0 17169000 6374 145 3262 3635 10467 10467 TTHFVEGGDAGNREDQINR 19 0 2 Unmodified _TTHFVEGGDAGNREDQINR_ 0 0 0 1 A8MUD9;O95036;A0A024R814;P18124 A8MUD9 A8MUD9 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 706.3324 3 705.998262 2114.97296 NaN NaN NaN -0.2336 -0.00016492 NaN NaN NaN NaN 82.475 1.0614 82.475 81.533 82.594 0 0 0 0 6.4373E-15 1 43717 65.423 49.831 1 NaN NaN 0 76620000 76620000 0 6375 145 3262 3635 10468 10468 TTHYTPLACGSNPLK 15 1 0 Unmodified _TTHYTPLACGSNPLK_ 0 0 0 0 O60832;U5U7S7;H7C2Q9;H7C0M1;C9IYT0;U5UA77 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 553.9446 3 553.94349 1658.80864 86833.98 1.3837 0.00076647 0.20626 0.00011426 1.5899 0.00088073 553.943402735157 556.949552153242 100.9 0.24628 100.9 100.79 101.04 -7.6294E-06 51 17 4 0 0 0 0.00045649 1 57899 58.32 47.533 1 1.2988 1.5552 0 14094000 4680800 9413200 6376 931 3263 3636 10469 10469 TTPPAETAPLPPLPESESLLK 21 1 0 Phospho (STY) _T(ph)TPPAETAPLPPLPESESLLK_ T(0.498)T(0.498)PPAET(0.005)APLPPLPESESLLK T(0)T(0)PPAET(-20.3)APLPPLPES(-43.68)ES(-43.68)LLK 0 0 1 0 A0A024R465;A0A024R418;P52746 A0A024R465 A0A024R465 ZNF142 Zinc finger protein 142 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1135.076 2 1134.57417 2267.1338 58435.05 0.47732 0.00054155 0.42037 0.00047694 0.89769 0.0010185 1135.07593914947 1138.58168217904 128.7 0.4823 128.7 128.48 128.97 0 232 39 8 0 0 0 3.3543E-05 1 78117 44.577 37.674 5 0.44688 0.53917 0 16676000 11867000 4809700 6377 85 3264 3637 10470 10470 2628;2629 TTPSGLQIMPLK 12 1 0 Oxidation (M),Phospho (STY) _T(ph)TPSGLQIM(ox)PLK_ TTPSGLQIM(1)PLK T(0.5)T(0.5)PSGLQIMPLK TTPSGLQIM(78.93)PLK T(0)T(0)PS(-31.11)GLQIMPLK 0 1 1 0 A0A0B4J291;Q8N8U2 A0A0B4J291 A0A0B4J291 CDYL2 Chromodomain Y-like protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 695.3497 2 691.343478 1380.6724 74622.51 1.644 0.0011366 0.16525 0.00011424 1.8093 0.0012508 691.343743664591 695.350669211442 99.793 0.81477 99.793 99.498 100.31 0 159 65 4 0 0 0 0.0011037 2 56879 78.934 59.663 3 1.4775 1.8396 0 25422000 8036300 17386000 6378 311 3265 3638 10471;10472 10471 73 2686;2687 TTPSYVAFTDTER 13 0 1 Unmodified _TTPSYVAFTDTER_ 0 0 0 0 Q53FC7;B3KSM6;B2R6X5;P17066;B4DXY3;B4DFN9;B4DI39;B4DWK5;Q53FA3;B2RCQ9;A8K5I0;A0A0G2JIW1;B4DI54;Q59EJ3;P48741;P34931;P0DMV9;P0DMV8;B4DNV4;B4E1T6;B4DNX1;E9PI65;B3KUS2;Q53HF2;E9PKE3;V9HW22;Q53GZ6;P11142;B3KTV0;E9PN25;E9PPY6;E9PQQ4;E9PQK7;E9PK54;E9PLF4;B4DTX2;E9PNE6;A0A024R6B5;P54652 Q53FC7;Q53HF2 Q53HF2 HSPA6;HEL-S-103;HSPA7;HSPA1L;HSPA1B;HSPA1A;HSPA8;HEL-S-72p;HSPA2 Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7;Heat shock 70 kDa protein 1-like;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 744.3539 2 744.354271 1486.69399 NaN NaN NaN NaN NaN NaN NaN NaN NaN 90.3 1 90.3 89.8 90.8 0 0 0 0 0.027236 1 49658 39.266 20.954 1 6379 534;810 3266 3639 10473 10473 TTSFFLNSPEK 11 1 0 Phospho (STY) _TTSFFLNS(ph)PEK_ TTSFFLNS(1)PEK T(-132.59)T(-132.59)S(-97.24)FFLNS(97.24)PEK 0 0 1 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 675.8032 2 675.802501 1349.59045 73465.45 1.3182 0.00089084 -0.36354 -0.00024568 0.95465 0.00064515 675.802296685609 679.809338202626 101.28 2.4483 101.28 100.42 102.87 0 1133 193 9 0 0 0 3.2652E-102 5 58381 210.93 193.9 4 1.3119 1.6206 0 528620000 227680000 300940000 6380 1170 3267 3640 10474;10475;10476;10477;10478 10477 2284 TTSFFLNSPEK 11 1 0 Phospho (STY) _TTSFFLNS(ph)PEK_ TTSFFLNS(1)PEK T(-83.57)T(-83.57)S(-59.98)FFLNS(59.98)PEK 0 0 1 0 Q8WYP5;B3KVE5;B3KTD2 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 679.8105 2 675.802501 1349.59045 72817.48 1.0017 0.00067698 -0.023851 -1.6119E-05 0.97789 0.00066086 675.802701163791 679.809572296418 104.03 3.657 104.03 103.09 106.75 7.6294E-06 1849 350 10 0 0 0 1.8046E-10 9 67485 122.45 111.92 4 2.6141 1.7436 0 584640000 158090000 426550000 6381 1170 3267 3640 10479;10480;10481;10482;10483;10484;10485;10486;10487 10484 2284 TVANLLSGKSPR 12 1 1 Phospho (STY) _TVANLLSGKS(ph)PR_ TVANLLS(0.324)GKS(0.676)PR T(-48.24)VANLLS(-3.2)GKS(3.2)PR 0 0 1 1 J3KQ96;E7ETY2;Q13428 J3KQ96 J3KQ96 TCOF1 Treacle protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 661.8458 2 661.845034 1321.67552 78854.13 0.88202 0.00058376 -0.43688 -0.00028914 0.44515 0.00029462 661.844725488764 670.855950758689 81.639 0.49023 81.639 81.316 81.806 0 85 46 4 0 0 0 0.0059833 1 43515 57.288 42.883 3 1.1606 1.3408 0 26973000 12253000 14720000 6382 792 3268 3641 10488 10488 1357;1358 TVANLLSGKSPR 12 1 1 Phospho (STY) _TVANLLS(ph)GKSPR_ TVANLLS(0.737)GKS(0.263)PR T(-41.91)VANLLS(4.47)GKS(-4.47)PR 0 0 1 1 J3KQ96;E7ETY2;Q13428 J3KQ96 J3KQ96 TCOF1 Treacle protein ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 670.8569 2 661.845034 1321.67552 NaN NaN NaN -0.45344 -0.00030011 NaN NaN NaN NaN 81.574 0.35021 81.574 81.263 81.613 0 0 0 0 0.010055 1 43228 55.314 26.915 3 NaN NaN 0 11610000 0 11610000 6383 792 3268 3641 10489 10489 1357;1358 TVANLLSGKSPR 12 1 1 Phospho (STY) _TVANLLSGKS(ph)PR_ TVANLLS(0.04)GKS(0.96)PR T(-86.61)VANLLS(-13.76)GKS(13.76)PR 0 0 1 1 J3KQ96;E7ETY2;Q13428 J3KQ96 J3KQ96 TCOF1 Treacle protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 670.8576 2 661.845034 1321.67552 74176.36 1.125 0.00074457 -0.30807 -0.0002039 0.81692 0.00054067 661.845216028942 670.855907523039 68.442 2.5875 68.442 67.439 70.026 -7.6294E-06 993 225 7 0 0 0 7.6704E-06 2 42536 91.457 74.927 3 2.7136 2.094 0 80682000 19875000 60807000 6384 792 3268 3641 10490;10491 10490 1357;1358 TVANLLSGKSPR 12 1 1 Phospho (STY) _TVANLLSGKS(ph)PR_ TVANLLS(0.023)GKS(0.977)PR T(-68.61)VANLLS(-16.27)GKS(16.27)PR 0 0 1 1 J3KQ96;E7ETY2;Q13428 J3KQ96 J3KQ96 TCOF1 Treacle protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 447.5731 3 441.565782 1321.67552 90331.88 0.33424 0.00014759 -0.15923 -7.031E-05 0.17501 7.7277E-05 441.565710243422 447.573146326654 68.45 2.1841 68.45 67.439 69.623 0 793 189 7 0 0 0 0.000527 2 43148 76.158 61.367 3 2.5785 1.9887 0 59372000 16931000 42440000 6385 792 3268 3641 10492;10493 10493 1357;1358 TVDMESTEVFTK 12 1 0 Oxidation (M),Phospho (STY) _TVDM(ox)ES(ph)TEVFTK_ TVDM(1)ESTEVFTK TVDMES(0.854)T(0.146)EVFTK TVDM(134.68)ESTEVFTK T(-99.8)VDMES(7.67)T(-7.67)EVFT(-46.66)K 0 1 1 0 CON__P02663 CON__P02663 CON__P02663 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 741.8068 2 741.807123 1481.59969 NaN NaN NaN -0.13331 -9.8888E-05 NaN NaN NaN NaN 67.525 1.3171 67.525 66.741 68.058 0 0 0 0 6.0378E-44 2 33404 134.68 65.234 4 NaN NaN 0 66790000 66790000 0 + 6386 752 3269 3642 10494;10495 10495 200 1264 TVDMESTEVFTK 12 1 0 Oxidation (M),Phospho (STY) _TVDM(ox)ES(ph)TEVFTK_ TVDM(1)ESTEVFTK TVDMES(0.772)T(0.226)EVFT(0.002)K TVDM(57.27)ESTEVFTK T(-38.31)VDMES(5.33)T(-5.33)EVFT(-25.6)K 0 1 1 0 CON__P02663 CON__P02663 CON__P02663 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 741.8086 2 741.807123 1481.59969 NaN NaN NaN -0.83134 -0.00061669 NaN NaN NaN NaN 64.526 1.3976 64.526 64.089 65.487 0 0 0 0 0.0017164 2 40714 57.267 29.858 4 NaN NaN 0 9688100 9688100 0 + 6387 752 3269 3642 10496;10497 10497 200 1264 TVDSQGPTPVCTPTFLER 18 0 1 2 Phospho (STY) _TVDSQGPT(ph)PVCT(ph)PTFLER_ TVDSQGPT(0.998)PVCT(0.893)PT(0.108)FLER T(-56.67)VDS(-35.13)QGPT(27.3)PVCT(9.23)PT(-9.23)FLER 0 0 2 0 Q9BYG3;H7BZL0;C9J808 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1083.457 2 1082.95473 2163.8949 57448.57 0.52697 0.00057069 -0.14677 -0.00015894 0.38021 0.00041175 1083.45615816809 1087.95881142349 108.17 1.4854 108.17 107.69 109.18 0 959 115 13 0 0 0 7.7286E-18 5 63695 104.89 104.89 10 0.86452 1.0954 0 732890000 393050000 339840000 6388 1201 3270 3643 10498;10499;10500;10501;10502 10502 2391;2982;2983 TVDSQGPTPVCTPTFLER 18 0 1 3 Phospho (STY) _TVDS(ph)QGPT(ph)PVCT(ph)PTFLER_ T(0.029)VDS(0.974)QGPT(0.996)PVCT(0.848)PT(0.152)FLER T(-15.88)VDS(15.88)QGPT(24.54)PVCT(7.48)PT(-7.48)FLER 0 0 3 0 Q9BYG3;H7BZL0;C9J808 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1123.4407 2 1122.93789 2243.86123 58242.95 0.46868 0.0005263 -0.21163 -0.00023764 0.25705 0.00028866 1123.43901331805 1127.94227086377 116.72 0.84142 116.72 116.34 117.19 0 417 74 8 0 0 0 1.5985E-06 1 69704 64.2 56.095 10 0.45435 0.5718 0 48644000 30855000 17789000 6389 1201 3270 3644 10503 10503 2391;2982;2983 TVDSQGPTPVCTPTFLER 18 0 1 Phospho (STY) _TVDSQGPTPVCT(ph)PTFLER_ TVDS(0.002)QGPT(0.101)PVCT(0.711)PT(0.186)FLER T(-41.77)VDS(-26.24)QGPT(-8.48)PVCT(5.82)PT(-5.82)FLER 0 0 1 0 Q9BYG3;H7BZL0;C9J808 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1047.9723 2 1042.97156 2083.92857 NaN NaN NaN -0.24282 -0.00025325 NaN NaN NaN NaN 106.81 0.97393 106.81 106.36 107.33 0 0 0 0 8.0313E-08 2 62451 77.506 56.666 5 NaN NaN 0 25103000 0 25103000 6390 1201 3270 3645 10504;10505 10505 2391;2982;2983 TVDSQGPTPVCTPTFLER 18 0 1 Phospho (STY) _TVDSQGPTPVCT(ph)PTFLER_ TVDS(0.002)QGPT(0.149)PVCT(0.7)PT(0.149)FLER T(-44.61)VDS(-25.89)QGPT(-6.71)PVCT(6.71)PT(-6.71)FLER 0 0 1 0 Q9BYG3;H7BZL0;C9J808 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1042.9755 2 1042.97156 2083.92857 NaN NaN NaN -1.746 -0.001821 NaN NaN NaN NaN 106.85 0.98937 106.85 106.33 107.32 0 0 0 0 5.7147E-07 2 62581 64.275 54.992 5 NaN NaN 0 38058000 38058000 0 6391 1201 3270 3645 10506;10507 10507 2391;2982;2983 TVDSQGPTPVCTPTFLER 18 0 1 Phospho (STY) _TVDSQGPT(ph)PVCTPTFLER_ TVDS(0.006)QGPT(0.906)PVCT(0.071)PT(0.017)FLER T(-36.75)VDS(-21.96)QGPT(11.07)PVCT(-11.07)PT(-17.16)FLER 0 0 1 0 Q9BYG3;H7BZL0;C9J808 Q9BYG3 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1043.4725 2 1042.97156 2083.92857 58303.43 0.74377 0.00077573 0.21505 0.00022429 0.95882 0.001 1043.47285731457 1047.97642995177 113.24 1.0963 113.24 112.69 113.79 0 677 102 11 0 0 0 6.1724E-07 2 72695 77.221 77.221 5 1.2437 0.83053 0 138490000 64313000 74174000 6392 1201 3270 3645 10508;10509 10508 2391;2982;2983 TVFAEHISDECK 12 1 0 Unmodified _TVFAEHISDECK_ 0 0 0 0 B3KS36;P39023;Q8TBW1;Q96QL0;H7C3M2;H7C422;Q9NY85;G5E9G0;B4DN06;F8WCR1;B5MCW2 B3KS36 B3KS36 RPL3;rpl3 60S ribosomal protein L3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 722.3389 2 718.329741 1434.64493 70804.18 0.75785 0.00054439 0.95178 0.00068369 1.7096 0.0012281 718.330332269352 722.337745741258 82.55 0.37965 82.55 82.346 82.726 0 74 37 4 0 0 0 0.0010632 2 44145 86.014 52.986 1 0.89086 1.0931 0 21301000 10439000 10862000 6393 597 3271 3646 10510;10511 10511 TVFAEHISDECK 12 1 0 Unmodified _TVFAEHISDECK_ 0 0 0 0 B3KS36;P39023;Q8TBW1;Q96QL0;H7C3M2;H7C422;Q9NY85;G5E9G0;B4DN06;F8WCR1;B5MCW2 B3KS36 B3KS36 RPL3;rpl3 60S ribosomal protein L3 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 722.3361 2 718.329741 1434.64493 NaN NaN NaN 0.75503 0.00054236 NaN NaN NaN NaN 83.013 0.64503 83.013 82.726 83.371 0 0 0 0 0.003592 1 44723 69.672 40.714 1 NaN NaN 0 18153000 0 18153000 6394 597 3271 3646 10512 10512 TVFAEHISDECK 12 1 0 Unmodified _TVFAEHISDECK_ 0 0 0 0 B3KS36;P39023;Q8TBW1;Q96QL0;H7C3M2;H7C422;Q9NY85;G5E9G0;B4DN06;F8WCR1;B5MCW2 B3KS36 B3KS36 RPL3;rpl3 60S ribosomal protein L3 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 718.3317 2 718.329741 1434.64493 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.746 1 81.746 81.246 82.246 0 0 0 0 0.0085698 1 43551 45.908 29.276 1 6395 597 3271 3646 10513 10513 TVFAEHISDECK 12 1 0 Unmodified _TVFAEHISDECK_ 0 0 0 0 B3KS36;P39023;Q8TBW1;Q96QL0;H7C3M2;H7C422;Q9NY85;G5E9G0;B4DN06;F8WCR1;B5MCW2 B3KS36 B3KS36 RPL3;rpl3 60S ribosomal protein L3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 722.337 2 718.329741 1434.64493 NaN NaN NaN NaN NaN NaN NaN NaN NaN 81.823 1 81.823 81.323 82.323 7.6294E-06 0 0 0 0.0040902 1 43612 51.436 15.925 1 6396 597 3271 3646 10514 10514 TVFAEHISDECK 12 1 0 Unmodified _TVFAEHISDECK_ 0 0 0 0 B3KS36;P39023;Q8TBW1;Q96QL0;H7C3M2;H7C422;Q9NY85;G5E9G0;B4DN06;F8WCR1;B5MCW2 B3KS36 B3KS36 RPL3;rpl3 60S ribosomal protein L3 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 718.3152 2 718.329741 1434.64493 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.098 1 82.098 81.598 82.598 7.6294E-06 0 0 0 0.0010948 1 43824 83.862 48.638 1 6397 597 3271 3646 10515 10515 TVFAEHISDECK 12 1 0 Unmodified _TVFAEHISDECK_ 0 0 0 0 B3KS36;P39023;Q8TBW1;Q96QL0;H7C3M2;H7C422;Q9NY85;G5E9G0;B4DN06;F8WCR1;B5MCW2 B3KS36 B3KS36 RPL3;rpl3 60S ribosomal protein L3 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 718.3301 2 718.329741 1434.64493 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.275 1 83.275 82.775 83.775 0 0 0 0 0.010957 1 44655 97.734 67.121 1 6398 597 3271 3646 10516 10516 TVFSPTLPAAR 11 0 1 Phospho (STY) _TVFS(ph)PTLPAAR_ TVFS(0.991)PT(0.009)LPAAR T(-45.4)VFS(20.35)PT(-20.35)LPAAR 0 0 1 0 A8K9U6;Q7Z2W4;Q05DV5;C9J6P4 A8K9U6 A8K9U6 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 620.3105 2 620.310296 1238.60604 77086.31 0.96887 0.000601 -0.3216 -0.00019949 0.64727 0.00040151 620.310204154231 625.314046142189 105.81 1.4361 105.81 105.08 106.51 0 375 96 6 0 0 0 0.0056371 2 61225 66.267 34.836 3 1.0912 1.3758 0 63282000 30727000 32554000 6399 505 3272 3647 10517;10518 10518 867 TVFSPTLPAAR 11 0 1 Phospho (STY) _TVFS(ph)PTLPAAR_ TVFS(0.995)PT(0.005)LPAAR T(-53.59)VFS(23.14)PT(-23.14)LPAAR 0 0 1 0 A8K9U6;Q7Z2W4;Q05DV5;C9J6P4 A8K9U6 A8K9U6 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 625.3145 2 620.310296 1238.60604 77345.65 1.109 0.00068792 -0.050203 -3.1142E-05 1.0588 0.00065678 620.310260111232 625.314318890093 110.79 1.4351 110.79 110.17 111.61 0 574 134 6 0 0 0 0.00056582 2 71407 84.479 59.006 3 1.3108 0.9694 0 23158000 9205900 13952000 6400 505 3272 3647 10519;10520 10519 867 TVLPTVPESPEEEVK 15 1 0 Phospho (STY) _TVLPTVPES(ph)PEEEVK_ TVLPTVPES(1)PEEEVK T(-98.62)VLPT(-35.43)VPES(35.43)PEEEVK 0 0 1 0 Q0D2N5;E9PBY7;E9PQ61;B4DLG2;O75152 Q0D2N5 Q0D2N5 ZC3H11A Zinc finger CCCH domain-containing protein 11A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 867.9207 2 867.415883 1732.81721 65837.27 1.3462 0.0011677 -0.024459 -2.1216E-05 1.3217 0.0011465 867.917336916605 871.422902244325 102.85 1.2753 102.85 102.13 103.41 0 602 90 10 0 0 0 8.1016E-42 4 59503 154.6 136.86 3 1.7624 2.1865 0 113510000 41345000 72167000 6401 638 3273 3648 10521;10522;10523;10524 10524 1055 TVLPTVPESPEEEVK 15 1 0 Phospho (STY) _TVLPTVPES(ph)PEEEVK_ TVLPTVPES(1)PEEEVK T(-74.94)VLPT(-37.73)VPES(37.73)PEEEVK 0 0 1 0 Q0D2N5;E9PBY7;E9PQ61;B4DLG2;O75152 Q0D2N5 Q0D2N5 ZC3H11A Zinc finger CCCH domain-containing protein 11A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 867.9192 2 867.415883 1732.81721 65645.69 1.1665 0.0010118 0.28455 0.00024682 1.451 0.0012587 867.416083442695 871.423163275505 109.22 1.306 109.22 108.74 110.05 0 889 130 10 0 0 0 2.4579E-06 2 70089 85.28 85.28 3 1.8122 1.211 0 184420000 63612000 120810000 6402 638 3273 3648 10525;10526 10525 1055 TVMDGGLESDGPNMTENGLEDESRPQR 27 0 2 2 Oxidation (M),Phospho (STY) _TVM(ox)DGGLES(ph)DGPNM(ox)TENGLEDESRPQR_ TVM(1)DGGLESDGPNM(1)TENGLEDESRPQR TVMDGGLES(0.978)DGPNMT(0.021)ENGLEDESRPQR TVM(70.15)DGGLESDGPNM(70.15)TENGLEDESRPQR T(-45.64)VMDGGLES(16.61)DGPNMT(-16.61)ENGLEDES(-39.52)RPQR 0 2 1 1 P51116 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1023.4263 3 1016.08491 3045.23289 60114.58 0.20335 0.00020663 0.19461 0.00019774 0.39797 0.00040437 1016.75397085011 1023.09159880791 71.861 0.7915 71.861 71.518 72.31 0 285 70 7 0 0 0 3.7032E-18 1 36319 70.151 70.151 4 2.1285 2.6398 0 41072000 13922000 27150000 6403 1003 3274 3649 10527 10527 287;288 1830 TVQSLEIDLDSMR 13 0 1 Oxidation (M),Phospho (STY) _TVQS(ph)LEIDLDSM(ox)R_ TVQSLEIDLDSM(1)R TVQS(1)LEIDLDSMR TVQSLEIDLDSM(117.2)R T(-54.52)VQS(54.52)LEIDLDS(-70.32)MR 0 1 1 0 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__H-INV:HIT000015463 F8VZY9 F8VZY9 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 806.8624 2 801.857678 1601.7008 68018.29 1.0479 0.00084023 -0.22832 -0.00018308 0.81954 0.00065715 801.857112529457 806.861661949157 108.35 0.45435 108.35 108.05 108.5 0 118 34 5 0 0 0 1.0525E-14 1 63469 117.2 106.26 3 0.85351 1.0474 0 22768000 14610000 8157800 6404 186 3275 3650 10528 10528 44 299 TVQSNSPISALAPTGK 16 1 0 Phospho (STY) _TVQSNS(ph)PISALAPTGK_ T(0.001)VQS(0.311)NS(0.677)PIS(0.012)ALAPTGK T(-31.08)VQS(-3.38)NS(3.38)PIS(-17.53)ALAPT(-44.43)GK 0 0 1 0 B4DNS4;Q6ZSP7;Q6ZR82;B3KVU7;Q53XM7;O95292 B4DNS4 B4DNS4 VAPB Vesicle-associated membrane protein-associated protein B/C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 829.9185 2 825.90856 1649.80257 67076.71 0.89912 0.00074259 -0.018571 -1.5338E-05 0.88055 0.00072725 825.908458759164 829.915746570102 89.335 1.0063 89.335 88.754 89.761 0 445 88 7 0 0 0 2.1334E-06 3 49079 76.341 76.341 5 0.67992 0.84389 0 107450000 63379000 44076000 6405 604 3276 3651 10529;10530;10531 10530 993 TVQSNSPISALAPTGK 16 1 0 Phospho (STY) _TVQSNS(ph)PISALAPTGK_ TVQS(0.002)NS(0.901)PIS(0.097)ALAPTGK T(-57.54)VQS(-27.63)NS(9.66)PIS(-9.66)ALAPT(-41.72)GK 0 0 1 0 B4DNS4;Q6ZSP7;Q6ZR82;B3KVU7;Q53XM7;O95292 B4DNS4 B4DNS4 VAPB Vesicle-associated membrane protein-associated protein B/C MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 825.9092 2 825.90856 1649.80257 66934.68 0.87076 0.00071917 0.58062 0.00047954 1.4514 0.0011987 825.908730322053 829.915877186574 92.857 0.90884 92.857 92.436 93.344 -7.6294E-06 532 89 8 0 0 0 9.9259E-11 1 59746 91.317 80.53 5 1.453 0.96159 0 67815000 30244000 37571000 6406 604 3276 3651 10532 10532 993 TVSPDEITTR 10 0 1 Phospho (STY) _TVS(ph)PDEITTR_ T(0.002)VS(0.985)PDEIT(0.007)T(0.007)R T(-26.72)VS(21.7)PDEIT(-21.7)T(-21.7)R 0 0 1 0 E9PPJ1;Q8NG31 E9PPJ1 E9PPJ1 CASC5 Protein CASC5 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 604.7757 2 599.7712 1197.52785 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.029 1 57.029 56.529 57.529 0 0 0 0 0.011638 1 35064 44.616 20.765 4 6407 814 3277 3652 10533 10533 1405 TVSPDEITTRPMDK 14 1 1 Oxidation (M),Phospho (STY) _TVS(ph)PDEITTRPM(ox)DK_ TVSPDEITTRPM(1)DK T(0.004)VS(0.996)PDEITTRPMDK TVSPDEITTRPM(79.81)DK T(-24.15)VS(24.15)PDEIT(-53.37)T(-57.09)RPMDK 0 1 1 1 E9PPJ1;Q8NG31 E9PPJ1 E9PPJ1 CASC5 Protein CASC5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 843.8766 2 843.376235 1684.73792 65719.43 0.68673 0.00057917 -0.60827 -0.000513 0.078458 6.6169E-05 843.87624574121 852.387691853521 64.573 2.2721 64.573 62.889 65.161 0 878 174 10 0 0 0 8.2343E-05 1 30588 79.81 69.622 4 0.76367 0.92281 0 249420000 125690000 123730000 6408 814 3278 3653 10534 10534 222 1405 TVSPDEITTRPMDK 14 1 1 Oxidation (M),Phospho (STY) _TVS(ph)PDEITTRPM(ox)DK_ TVSPDEITTRPM(1)DK T(0.002)VS(0.998)PDEITTRPMDK TVSPDEITTRPM(54.97)DK T(-27.33)VS(27.33)PDEIT(-37.4)T(-37.4)RPMDK 0 1 1 1 E9PPJ1;Q8NG31 E9PPJ1 E9PPJ1 CASC5 Protein CASC5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 562.9213 3 562.586582 1684.73792 80883.85 0.63838 0.00035915 0.11023 6.2015E-05 0.74861 0.00042116 562.586566817223 568.5941172326 64.629 0.89119 64.629 64.093 64.984 0 280 63 6 0 0 0 0.0011098 2 30608 54.974 38.23 4 0.97845 1.1609 0 60886000 27441000 33445000 6409 814 3278 3653 10535;10536 10535 222 1405 TVSPDEITTRPMDK 14 1 1 Oxidation (M),Phospho (STY) _TVS(ph)PDEITTRPM(ox)DK_ TVSPDEITTRPM(1)DK T(0.001)VS(0.999)PDEITTRPMDK TVSPDEITTRPM(99.93)DK T(-28.9)VS(28.9)PDEIT(-59.65)T(-64.89)RPMDK 0 1 1 1 E9PPJ1;Q8NG31 E9PPJ1 E9PPJ1 CASC5 Protein CASC5 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 843.3765 2 843.376235 1684.73792 65045.88 1.0821 0.00091259 -0.20773 -0.0001752 0.87433 0.00073739 843.376085300377 852.387334850211 50.291 2.5794 50.291 48.791 51.37 0 1018 242 6 0 0 0 1.093E-08 3 30647 99.927 87.761 4 0.94944 0.7335 0 158080000 77602000 80477000 6410 814 3278 3653 10537;10538;10539 10538 222 1405 TVSPDEITTRPMDK 14 1 1 Phospho (STY) _TVS(ph)PDEITTRPMDK_ T(0.013)VS(0.985)PDEIT(0.001)T(0.001)RPMDK T(-18.9)VS(18.9)PDEIT(-30.31)T(-29.81)RPMDK 0 0 1 1 E9PPJ1;Q8NG31 E9PPJ1 E9PPJ1 CASC5 Protein CASC5 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 844.3903 2 835.378778 1668.743 NaN NaN NaN 3.2479 0.0027132 NaN NaN NaN NaN 68.158 1.1723 68.158 67.663 68.835 0 0 0 0 0.003129 1 42698 53.168 14.152 4 NaN NaN 0 11814000 0 11814000 6411 814 3278 3654 10540 10540 1405 TVSPPIR 7 0 1 Phospho (STY) _TVS(ph)PPIR_ TVS(1)PPIR T(-45.27)VS(45.27)PPIR 0 0 1 0 B4DN52;Q53GG0;Q9UHB6;F8VQE1;F8VS07;B3KTW2 B4DN52 B4DN52 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 425.215 2 425.215136 848.415719 92075.17 -0.054242 -2.3065E-05 0.28239 0.00012007 0.22814 9.701E-05 425.215083671846 430.21926558254 62.573 1.4247 62.573 61.84 63.264 0 460 111 6 0 0 0 0.019445 3 29033 71.379 7.6349 2 2.0448 2.5769 0 58780000 18218000 40562000 6412 644 3279 3655 10541;10542;10543 10542 1071 TVSPPIR 7 0 1 Phospho (STY) _TVS(ph)PPIR_ TVS(1)PPIR T(-40.94)VS(40.94)PPIR 0 0 1 0 B4DN52;Q53GG0;Q9UHB6;F8VQE1;F8VS07;B3KTW2 B4DN52 B4DN52 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 430.2193 2 425.215136 848.415719 92812.13 0.27099 0.00011523 -0.079579 -3.3838E-05 0.19141 8.1389E-05 425.215075406782 430.219133507568 54.533 1.8208 54.533 53.622 55.443 0 566 157 6 0 0 0 0.022661 1 33627 67.897 6.9869 2 5.829 4.1637 0 29218000 4401600 24817000 6413 644 3279 3655 10544 10544 1071 TVSPPIRK 8 1 1 Phospho (STY) _TVS(ph)PPIRK_ TVS(1)PPIRK T(-42.58)VS(42.58)PPIRK 0 0 1 1 B4DN52;Q53GG0;Q9UHB6;F8VQE1;F8VS07;B3KTW2 B4DN52 B4DN52 LIMA1 LIM domain and actin-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 489.2628 2 489.262617 976.510682 85404.31 0.32636 0.00015967 0.1365 6.6785E-05 0.46286 0.00022646 489.262746766003 498.273802226638 57.622 1.3167 57.622 57.049 58.366 0 523 106 7 0 0 0 0.0042895 2 25525 64.04 34.567 2 1.9103 2.3074 0 242210000 79552000 162660000 6414 644 3280 3656 10545;10546 10546 1071 TVSPPIRK 8 1 1 Phospho (STY) _TVS(ph)PPIRK_ TVS(1)PPIRK T(-44.01)VS(44.01)PPIRK 0 0 1 1 B4DN52;Q53GG0;Q9UHB6;F8VQE1;F8VS07;B3KTW2 B4DN52 B4DN52 LIMA1 LIM domain and actin-binding protein 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 498.2741 2 489.262617 976.510682 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.256 1 57.256 56.756 57.756 -3.8147E-06 0 0 0 0.012807 1 25056 64.711 25.69 2 6415 644 3280 3656 10547 10547 1071 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(150.61)DVVYALK 0 1 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 663.8536 2 663.852321 1325.69009 74646.52 0.86414 0.00057366 0.16054 0.00010657 1.0247 0.00068023 663.85251827252 667.859634448851 106.73 0.90501 106.73 106.45 107.35 7.6294E-06 451 74 8 0 0 0 3.1083E-32 2 62074 150.61 111.06 1 0.8848 1.0971 0 121680000 59474000 62207000 6416 528 3281 3657 10548;10549 10549 138 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(101.65)DVVYALK 0 1 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 667.8608 2 663.852321 1325.69009 74646.49 1.0348 0.00068694 -0.059247 -3.9331E-05 0.97552 0.0006476 663.852202135055 667.859372281098 107.78 1.2189 107.78 107.27 108.49 0 427 92 6 0 0 0 6.7046E-09 2 63310 101.65 71.076 1 0.90299 1.1188 0 137750000 71029000 66720000 6417 528 3281 3657 10550;10551 10551 138 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(87.15)DVVYALK 0 1 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 667.8607 2 663.852321 1325.69009 75875.59 0.78139 0.00051873 0.57832 0.00038392 1.3597 0.00090265 663.85216775728 667.859777850098 145.28 0.15581 145.28 145.25 145.41 1.5259E-05 20 4 8 0 0 0 0.00057194 2 83679 87.149 62.012 1 0.73644 0.90033 0 19409000 10760000 8649600 6418 528 3281 3657 10552;10553 10553 138 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(61.35)DVVYALK 0 1 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 663.853 2 663.852321 1325.69009 73578.83 1.1635 0.00077243 -0.12893 -8.5588E-05 1.0346 0.00068684 663.85217117134 667.859289776832 105.86 1.1981 105.86 105.4 106.6 0 559 114 7 0 0 0 0.015477 3 67896 61.353 41.024 1 0.51997 0.34593 0 28655000 18004000 10651000 6419 528 3281 3657 10554;10555;10556 10554 138 TVTAMDVVYALK 12 1 0 Oxidation (M) _TVTAM(ox)DVVYALK_ TVTAM(1)DVVYALK TVTAM(61.35)DVVYALK 0 1 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 663.853 2 663.852321 1325.69009 74105.04 1.2208 0.00081043 -0.11165 -7.4118E-05 1.1092 0.00073631 663.852203989032 667.859253488548 107.32 1.3778 107.32 106.74 108.12 0 603 131 6 0 0 0 0.015477 3 68877 61.353 41.024 1 0.52354 0.33967 0 35217000 22715000 12502000 6420 528 3281 3657 10557;10558;10559 10557 138 TVTAMDVVYALK 12 1 0 Oxidation (M),Phospho (STY) _T(ph)VTAM(ox)DVVYALK_ TVTAM(1)DVVYALK T(0.824)VT(0.176)AMDVVYALK TVTAM(93.62)DVVYALK T(6.71)VT(-6.71)AMDVVY(-82.87)ALK 0 1 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 703.8364 2 703.835486 1405.65642 77795.61 1.1296 0.00079504 0.35082 0.00024692 1.4804 0.001042 703.835664218736 707.843074954328 112.81 0.55364 112.81 112.58 113.14 0 92 53 4 0 0 0 8.4635E-06 1 66943 93.623 70.902 3 1.4004 1.6647 0 11611000 4364300 7246200 6421 528 3281 3658 10560 10560 138 2756 TVTAMDVVYALK 12 1 0 Oxidation (M),Phospho (STY) _T(ph)VTAM(ox)DVVYALK_ TVTAM(1)DVVYALK T(0.933)VT(0.067)AMDVVYALK TVTAM(58.1)DVVYALK T(11.46)VT(-11.46)AMDVVY(-46.38)ALK 0 1 1 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 703.8361 2 703.835486 1405.65642 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.83 1 111.83 111.33 112.33 0 0 0 0 0.0004361 1 66265 58.098 26.751 3 6422 528 3281 3658 10561 10561 138 2756 TVTAMDVVYALK 12 1 0 Unmodified _TVTAMDVVYALK_ 0 0 0 0 B2R4R0;P62805;Q0VAS5 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 656.3577 2 655.854864 1309.69517 74679.68 1.2565 0.00082411 -0.29563 -0.00019389 0.96091 0.00063022 655.854704071659 659.861819853173 123.81 0.93405 123.81 123.4 124.33 7.6294E-06 455 89 7 0 0 0 0.022356 3 79926 62.303 36.364 1 0.92402 0.67412 0 20196000 11170000 9026400 6423 528 3281 3659 10562;10563;10564 10564 TYFEDNPR 8 0 1 Unmodified _TYFEDNPR_ 0 0 0 0 H7BZN7;Q53HB9;Q9NY93 H7BZN7 H7BZN7 DDX56 Probable ATP-dependent RNA helicase DDX56 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 521.2355 2 521.235439 1040.45632 NaN NaN NaN NaN NaN NaN NaN NaN NaN 63.527 1 63.527 63.027 64.027 3.8147E-06 0 0 0 0.024474 1 29936 48.561 28.925 1 6424 880 3282 3660 10565 10565 VAADLQLSTPQK 12 1 0 Phospho (STY) _VAADLQLST(ph)PQK_ VAADLQLS(0.295)T(0.705)PQK VAADLQLS(-3.78)T(3.78)PQK 0 0 1 0 A7E234;Q9H582;Q9H835;Q569I6 A7E234 A7E234 ZNF644 Zinc finger protein 644 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 675.8381 2 675.836875 1349.6592 78547.67 0.6745 0.00045585 0.15167 0.0001025 0.82617 0.00055836 675.837026359313 679.843897703895 74.874 0.81167 74.874 74.456 75.267 0 158 73 4 0 0 0 5.7652E-13 1 38319 114.7 77.514 2 0.33055 0.40373 0 18957000 12803000 6153500 6425 432 3283 3661 10566 10566 2728 VAAETQSPSLFGSTK 15 1 0 Phospho (STY) _VAAETQS(ph)PSLFGSTK_ VAAET(0.078)QS(0.792)PS(0.105)LFGS(0.019)T(0.007)K VAAET(-10.05)QS(8.79)PS(-8.79)LFGS(-16.23)T(-20.83)K 0 0 1 0 A0A024R4X7;Q9UKX7 A0A024R4X7 A0A024R4X7 hCG_1989366;NUP50 Nuclear pore complex protein Nup50 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 802.3762 2 801.874185 1601.73382 NaN NaN NaN 0.81347 0.0006523 NaN NaN NaN NaN 83.472 0.91642 83.472 82.954 83.87 0 0 0 0 0.0058722 2 44879 44.188 28.297 5 NaN NaN 0 7169500 7169500 0 6426 97 3284 3662 10567;10568 10568 130;2633 VAAETQSPSLFGSTK 15 1 0 Phospho (STY) _VAAETQS(ph)PSLFGSTK_ VAAET(0.018)QS(0.831)PS(0.149)LFGS(0.001)T(0.001)K VAAET(-16.75)QS(7.45)PS(-7.45)LFGS(-28.66)T(-28.78)K 0 0 1 0 A0A024R4X7;Q9UKX7 A0A024R4X7 A0A024R4X7 hCG_1989366;NUP50 Nuclear pore complex protein Nup50 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 805.8809 2 801.874185 1601.73382 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.373 1 83.373 82.873 83.873 -7.6294E-06 0 0 0 5.0699E-07 1 44735 71.344 51.248 5 6427 97 3284 3662 10569 10569 130;2633 VAASPKSPTAALNESLVECPK 21 2 0 2 Phospho (STY) _VAAS(ph)PKS(ph)PTAALNESLVECPK_ VAAS(0.666)PKS(0.666)PT(0.666)AALNES(0.002)LVECPK VAAS(0)PKS(0)PT(0)AALNES(-26.71)LVECPK 0 0 2 1 Q53EZ4 Q53EZ4 Q53EZ4 CEP55 Centrosomal protein of 55 kDa ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 782.7003 3 777.02307 2328.04738 NaN NaN NaN -2.1764 -0.0016911 NaN NaN NaN NaN 102.74 0.84502 102.74 102.31 103.16 0 0 0 0 3.9115E-06 1 59087 49.089 36.16 6 NaN NaN 0 12670000 0 12670000 6428 1087 3285 3663 10570 10570 2050;2051;2936 VAFSEITSPSK 11 1 0 Phospho (STY) _VAFSEITS(ph)PSK_ VAFSEIT(0.03)S(0.815)PS(0.155)K VAFS(-108.47)EIT(-14.39)S(7.19)PS(-7.19)K 0 0 1 0 B7Z8H0;Q96F82;A8K794;Q13415 B7Z8H0 B7Z8H0 ORC1L;ORC1 Origin recognition complex subunit 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 623.2925 2 623.291769 1244.56898 76633.27 0.77884 0.00048544 0.19815 0.00012351 0.97699 0.00060895 623.291684284309 627.299209275845 82.398 2.1195 82.398 81.175 83.295 0 798 197 7 0 0 0 3.7516E-58 5 44074 182.1 149.77 4 1.4927 1.8483 0 180970000 76279000 104700000 6429 487 3286 3664 10571;10572;10573;10574;10575 10574 842 VAFSEITSPSK 11 1 0 Phospho (STY) _VAFSEITS(ph)PSK_ VAFSEIT(0.046)S(0.924)PS(0.03)K VAFS(-106.58)EIT(-13.01)S(13.01)PS(-14.94)K 0 0 1 0 B7Z8H0;Q96F82;A8K794;Q13415 B7Z8H0 B7Z8H0 ORC1L;ORC1 Origin recognition complex subunit 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 623.2925 2 623.291769 1244.56898 76951.63 0.89871 0.00056016 0.03133 1.9528E-05 0.93004 0.00057968 623.291838195926 627.298840690667 83.419 1.6638 83.419 82.914 84.578 0 924 153 10 0 0 0 1.0221E-85 4 53748 196.38 147.38 4 1.6892 1.1273 0 425060000 167260000 257800000 6430 487 3286 3664 10576;10577;10578;10579 10578 842 VAHSDKPGSTSTASFR 16 1 1 Unmodified _VAHSDKPGSTSTASFR_ 0 0 0 1 A8KA83;Q9P0L0 A8KA83 A8KA83 VAPA Vesicle-associated membrane protein-associated protein A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 556.2834 3 549.941026 1646.80125 82151.31 0.70363 0.00038695 -0.14463 -7.9538E-05 0.559 0.00030742 549.940855461785 555.948425083987 80.905 0.98891 80.905 80.534 81.523 0 409 91 6 0 0 0 0.00039881 2 43290 52.172 41.891 1 0.70577 0.83713 0 59728000 36728000 23000000 6431 508 3287 3665 10580;10581 10581 VALKASEPVAR 11 1 1 Phospho (STY) _VALKAS(ph)EPVAR_ VALKAS(1)EPVAR VALKAS(56.23)EPVAR 0 0 1 1 REV__Q8NFD2 REV__Q8NFD2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 610.8242 2 610.82357 1219.63259 78270.99 0.69782 0.00042625 0.25295 0.00015451 0.95077 0.00058076 610.823482179998 619.83509404548 48.394 1.3566 48.394 47.809 49.165 0 489 126 5 0 0 0 0.0068914 1 29322 56.225 16.959 1 1.1096 0.85294 0 30553000 14177000 16375000 + 6432 1263 3288 3666 10582 10582 2599 VALVNDSLSDVTSTTSSR 18 0 1 Phospho (STY) _VALVNDS(ph)LSDVTSTTSSR_ VALVNDS(0.954)LS(0.046)DVTSTTSSR VALVNDS(13.21)LS(-13.21)DVT(-33.63)S(-39.6)T(-45.4)T(-51.02)S(-56.42)S(-55.4)R 0 0 1 0 A8K9U6;Q7Z2W4;Q05DV5 A8K9U6 A8K9U6 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 971.4595 2 966.451517 1930.88848 NaN NaN NaN 0.68321 0.00066029 NaN NaN NaN NaN 100.15 0.53614 100.15 99.799 100.33 -7.6294E-06 0 0 0 4.3865E-11 1 57287 86.488 64.29 8 NaN NaN 0 9471700 0 9471700 6433 505 3289 3667 10583 10583 868;869 VALVNDSLSDVTSTTSSR 18 0 1 Phospho (STY) _VALVNDSLS(ph)DVTSTTSSR_ VALVNDS(0.003)LS(0.992)DVT(0.003)S(0.001)TTSSR VALVNDS(-24.63)LS(24.63)DVT(-24.63)S(-31.62)T(-38.42)T(-45)S(-45)S(-45)R 0 0 1 0 A8K9U6;Q7Z2W4;Q05DV5 A8K9U6 A8K9U6 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 971.4586 2 966.451517 1930.88848 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.02 1 104.02 103.52 104.52 7.6294E-06 0 0 0 4.9616E-07 1 60165 84.14 66.044 8 6434 505 3289 3667 10584 10584 868;869 VANVSLLALYK 11 1 0 Unmodified _VANVSLLALYK_ 0 0 0 0 A8K517;P62266 A8K517 A8K517 RPS23 40S ribosomal protein S23 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 599.8688 2 595.860806 1189.70706 79055.1 1.1397 0.00067911 -0.071855 -4.2816E-05 1.0679 0.0006363 595.860655693485 599.867792768827 118.89 0.71278 118.89 118.4 119.11 0 307 63 6 0 0 0 0.0096813 1 76385 71.349 71.349 1 1.6252 1.239 0 17779000 7072600 10707000 6435 469 3290 3668 10585 10585 VAPEEHPVLLTEAPLNPK 18 1 0 Unmodified _VAPEEHPVLLTEAPLNPK_ 0 0 0 0 B4E335;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;G5E9R0;E7EVS6;Q562Z7;Q562Z4;Q562X9;Q562V5;Q562U2;Q562S0;Q562R8;Q562P0;Q562N6;Q562N0;Q562L9;Q562L5;Q562Y6;Q562P9;Q562N8;Q562N4;Q562L6;B4E3A4;P63261;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282 B4E335;B4E3A4 B4E3A4 PS1TP5BP1;ACTB;ACT;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 655.0323 3 652.026319 1953.05713 NaN NaN NaN -0.034543 -2.2523E-05 NaN NaN NaN NaN 112.53 1.6215 112.53 111.52 113.14 7.6294E-06 0 0 0 1.2261E-06 2 66630 71.697 7.4332 1 NaN NaN 0 33636000 0 33636000 6436 683;685 3291 3669 10586;10587 10586 VAPEEHPVLLTEAPLNPK 18 1 0 Unmodified _VAPEEHPVLLTEAPLNPK_ 0 0 0 0 B4E335;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;G5E9R0;E7EVS6;Q562Z7;Q562Z4;Q562X9;Q562V5;Q562U2;Q562S0;Q562R8;Q562P0;Q562N6;Q562N0;Q562L9;Q562L5;Q562Y6;Q562P9;Q562N8;Q562N4;Q562L6;B4E3A4;P63261;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282 B4E335;B4E3A4 B4E3A4 PS1TP5BP1;ACTB;ACT;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 652.0266 3 652.026319 1953.05713 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.43 1 112.43 111.93 112.93 0 0 0 0 6.5054E-07 1 66700 82.707 8.5869 1 6437 683;685 3291 3669 10588 10588 VAPEEHPVLLTEAPLNPK 18 1 0 Unmodified _VAPEEHPVLLTEAPLNPK_ 0 0 0 0 B4E335;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;G5E9R0;E7EVS6;Q562Z7;Q562Z4;Q562X9;Q562V5;Q562U2;Q562S0;Q562R8;Q562P0;Q562N6;Q562N0;Q562L9;Q562L5;Q562Y6;Q562P9;Q562N8;Q562N4;Q562L6;B4E3A4;P63261;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282 B4E335;B4E3A4 B4E3A4 PS1TP5BP1;ACTB;ACT;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 651.9911 3 652.026319 1953.05713 NaN NaN NaN NaN NaN NaN NaN NaN NaN 112.68 1 112.68 112.18 113.18 -7.6294E-06 0 0 0 0.00028723 1 66875 62.475 5.6234 1 6438 683;685 3291 3669 10589 10589 VAPEEHPVLLTEAPLNPK 18 1 0 Unmodified _VAPEEHPVLLTEAPLNPK_ 0 0 0 0 B4E335;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;Q8WVW5;B4DW52;G5E9R0;E7EVS6;Q562Z7;Q562Z4;Q562X9;Q562V5;Q562U2;Q562S0;Q562R8;Q562P0;Q562N6;Q562N0;Q562L9;Q562L5;Q562Y6;Q562P9;Q562N8;Q562N4;Q562L6;B4E3A4;P63261;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282 B4E335;B4E3A4 B4E3A4 PS1TP5BP1;ACTB;ACT;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 654.6989 3 652.026319 1953.05713 76495.7 1.2624 0.00082312 -0.26058 -0.0001699 1.0018 0.00065322 652.026094626074 654.697591913359 101.35 0.76997 101.35 101 101.77 0 343 70 8 0 0 0 3.918E-05 1 64994 49.425 10.602 1 2.7909 2.1648 0 15469000 4122600 11347000 6439 683;685 3291 3669 10590 10590 VAPVINNGSPTILGK 15 1 0 Phospho (STY) _VAPVINNGS(ph)PTILGK_ VAPVINNGS(0.971)PT(0.029)ILGK VAPVINNGS(15.26)PT(-15.26)ILGK 0 0 1 0 Q59FW1;H0Y4T7;A0A024R6P5;E7ESY4;Q13330;Q9BRL8;F8W9Y9 Q59FW1 Q59FW1 MTA1 Metastasis-associated protein MTA1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 780.4139 2 780.413281 1558.81201 69484.3 1.4306 0.0011164 -0.17508 -0.00013664 1.2555 0.0009798 780.413169686153 784.420113215067 101.49 1.3812 101.49 100.71 102.09 -7.6294E-06 795 112 10 0 0 0 4.8336E-51 4 58022 158.89 143.3 2 0.80208 0.99165 0 363540000 208500000 155040000 6440 124 3292 3670 10591;10592;10593;10594 10592 186 VAPVINNGSPTILGK 15 1 0 Phospho (STY) _VAPVINNGS(ph)PTILGK_ VAPVINNGS(0.626)PT(0.374)ILGK VAPVINNGS(2.24)PT(-2.24)ILGK 0 0 1 0 Q59FW1;H0Y4T7;A0A024R6P5;E7ESY4;Q13330;Q9BRL8;F8W9Y9 Q59FW1 Q59FW1 MTA1 Metastasis-associated protein MTA1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 784.4203 2 780.413281 1558.81201 69765.69 1.1981 0.00093499 -0.084673 -6.608E-05 1.1134 0.00086891 780.413235401593 784.420353061428 106.83 1.5119 106.83 106.16 107.67 7.6294E-06 960 143 10 0 0 0 5.4947E-05 1 69022 75.998 62.336 2 2.0485 1.3684 0 232420000 74184000 158240000 6441 124 3292 3670 10595 10595 186 VASEEEEVPLVVYLK 15 1 0 Phospho (STY) _VAS(ph)EEEEVPLVVYLK_ VAS(1)EEEEVPLVVYLK VAS(58.39)EEEEVPLVVY(-58.39)LK 0 0 1 0 A7MD96;B3KXB8;Q8N3V7 A7MD96 A7MD96 SYNPO Synaptopodin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 892.4404 2 892.441901 1782.86925 66083.45 0.64379 0.00057454 -1.8292 -0.0016324 -1.1854 -0.0010579 892.440542753302 896.44684562105 132.39 0.41266 132.39 132.2 132.61 0 109 34 4 0 0 0 0.00063057 2 80587 67.115 61.27 2 0.85721 1.0158 0 5601200 2444100 3157200 6442 436 3293 3671 10596;10597 10597 759 VASPLDQNGSFNVVIK 16 1 0 Phospho (STY) _VAS(ph)PLDQNGSFNVVIK_ VAS(1)PLDQNGSFNVVIK VAS(37.3)PLDQNGS(-37.3)FNVVIK 0 0 1 0 B9EGR5;Q8IWI9;H3BP52;H3BTF4 B9EGR5 B9EGR5 MGA MAX gene-associated protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 884.9388 2 884.437484 1766.86042 67077.05 0.75898 0.00067127 0.094409 8.3499E-05 0.85339 0.00075477 884.437515135848 888.444944781088 113.91 0.49343 113.91 113.63 114.12 0 175 42 6 0 0 0 0.00012891 1 67661 55.66 38.635 2 0.83728 1.0257 0 20437000 12209000 8228100 6443 732 3294 3672 10598 10598 1228;1229 VASPLDQNGSFNVVIK 16 1 0 2 Phospho (STY) _VAS(ph)PLDQNGS(ph)FNVVIK_ VAS(1)PLDQNGS(1)FNVVIK VAS(65.72)PLDQNGS(65.72)FNVVIK 0 0 2 0 B9EGR5;Q8IWI9;H3BP52;H3BTF4 B9EGR5 B9EGR5 MGA MAX gene-associated protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 928.4294 2 924.420649 1846.82675 62876.77 0.5439 0.00050279 0.27775 0.00025676 0.82165 0.00075955 924.42105372627 928.428105826992 120.46 0.67706 120.46 120.19 120.87 0 287 57 7 0 0 0 5.5578E-05 2 72686 65.716 52.053 1 0.45403 0.57499 0 32383000 22221000 10162000 6444 732 3294 3673 10599;10600 10600 1228;1229 VASSPVMVSNPATR 14 0 1 Oxidation (M),Phospho (STY) _VASS(ph)PVM(ox)VSNPATR_ VASSPVM(1)VSNPATR VAS(0.103)S(0.897)PVMVSNPATR VASSPVM(96.59)VSNPATR VAS(-9.41)S(9.41)PVMVS(-54.38)NPAT(-69.18)R 0 1 1 0 A6NEM2;P51610 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 761.355 2 756.349823 1510.68509 69241.38 0.7668 0.00057997 -0.238 -0.00018001 0.5288 0.00039996 756.349719713312 761.353964006275 57.614 1.4079 57.614 56.927 58.335 0 652 114 8 0 0 0 3.1681E-08 4 24966 96.591 89.221 4 0.75291 0.95125 0 142810000 79385000 63424000 6445 425 3295 3674 10601;10602;10603;10604 10602 107 737 VASSPVMVSNPATR 14 0 1 Oxidation (M),Phospho (STY) _VASS(ph)PVM(ox)VSNPATR_ VASSPVM(1)VSNPATR VAS(0.205)S(0.795)PVMVSNPATR VASSPVM(66.28)VSNPATR VAS(-5.88)S(5.88)PVMVS(-33.08)NPAT(-40.57)R 0 1 1 0 A6NEM2;P51610 A6NEM2 A6NEM2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 756.3511 2 756.349823 1510.68509 69036.76 1.0586 0.00080068 -0.05115 -3.8687E-05 1.0075 0.00076199 756.349738408765 761.353908248441 53.226 2.4913 53.226 52.3 54.791 -3.8147E-06 780 215 6 0 0 0 0.0015559 2 32131 66.285 59.596 4 1.2263 0.82452 0 98467000 42341000 56126000 6446 425 3295 3674 10605;10606 10606 107 737 VATVSLPR 8 0 1 Unmodified _VATVSLPR_ 0 0 0 0 CON__P00761 CON__P00761 CON__P00761 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 421.7584 2 421.758352 841.502152 NaN NaN NaN -0.0046416 -1.9576E-06 NaN NaN NaN NaN 59.864 1.7283 59.864 58.892 60.62 0 0 0 0 3.2993E-06 2 37173 91.626 34.163 1 NaN NaN 0 16389000 16389000 0 + 6447 750 3296 3675 10607;10608 10608 VAYVSFGPHAGK 12 1 0 Unmodified _VAYVSFGPHAGK_ 0 0 0 0 A8K7N0;Q6IPH7;P50914;E7EPB3;A0PJ62;B7Z6S8 A8K7N0 A8K7N0 RPL14 60S ribosomal protein L14 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 411.5526 3 411.552262 1231.63496 94622.13 0.26323 0.00010833 -0.082387 -3.3906E-05 0.18084 7.4426E-05 411.55221320933 414.22358183794 94.707 1.7904 94.707 94.107 95.897 0 466 150 5 0 0 0 0.0041894 2 52943 48.944 43.224 1 0.93424 1.1571 0 163210000 72365000 90840000 6448 489 3297 3676 10609;10610 10609 VAYVSFGPHAGK 12 1 0 Unmodified _VAYVSFGPHAGK_ 0 0 0 0 A8K7N0;Q6IPH7;P50914;E7EPB3;A0PJ62;B7Z6S8 A8K7N0 A8K7N0 RPL14 60S ribosomal protein L14 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 411.552 3 411.552262 1231.63496 93863.67 0.52099 0.00021442 -0.82186 -0.00033824 -0.30087 -0.00012382 411.551863761215 414.223297991279 96.046 0.5518 96.046 95.897 96.449 0 130 48 4 0 0 0 0.017971 1 54099 30.563 30.563 1 0.88667 1.083 0 18941000 9372100 9568900 6449 489 3297 3676 10611 10611 VDAVHADVYR 10 0 1 Unmodified _VDAVHADVYR_ 0 0 0 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 577.7967 2 572.790912 1143.56727 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.544 1 76.544 76.044 77.044 0 0 0 0 0.0023925 1 39678 70.1 46.672 1 6450 464 3298 3677 10612 10612 VDDDSLGEFPVTNSR 15 0 1 Phospho (STY) _VDDDS(ph)LGEFPVTNSR_ VDDDS(1)LGEFPVTNSR VDDDS(63.28)LGEFPVT(-63.28)NS(-70.57)R 0 0 1 0 A0A024R582;J3KMZ8;Q92785 A0A024R582 A0A024R582 DPF2 Zinc finger protein ubi-d4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 870.8757 2 865.867089 1729.71962 69042.26 1.1476 0.00099366 -0.23632 -0.00020463 0.91127 0.00078904 865.866763317 870.870975940981 95.871 0.48215 95.871 95.594 96.077 -7.6294E-06 142 42 5 0 0 0 3.1056E-06 3 54014 83.633 71.841 3 0.54724 0.65971 0 18721000 10102000 8619100 6451 105 3299 3678 10613;10614;10615 10614 141 VDGPRSPSYGR 11 0 2 Phospho (STY) _VDGPRS(ph)PSYGR_ VDGPRS(0.998)PS(0.002)YGR VDGPRS(27.97)PS(-27.97)Y(-37.65)GR 0 0 1 1 J3KTL2;Q07955;A8K1L8;J3KSR8;B7Z570 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 645.7912 2 635.782434 1269.55031 74767.85 0.88218 0.00056088 -0.64966 -0.00041304 0.23252 0.00014783 635.782421169591 645.79028499537 46.188 1.6485 46.188 45.422 47.071 0 707 109 9 0 0 0 0.0047418 1 17584 65.395 24.806 3 1.1272 1.4034 0 104190000 50817000 53371000 6452 895 3300 3679 10616 10616 1522 VDGPRSPSYGR 11 0 2 Phospho (STY) _VDGPRS(ph)PSYGR_ VDGPRS(0.818)PS(0.182)YGR VDGPRS(6.54)PS(-6.54)Y(-33.18)GR 0 0 1 1 J3KTL2;Q07955;A8K1L8;J3KSR8;B7Z570 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 430.8628 3 424.190715 1269.55031 90573.41 0.082375 3.4943E-05 -0.24663 -0.00010462 -0.16425 -6.9675E-05 424.190695524411 430.862769846567 46.194 1.6458 46.194 45.545 47.191 0 708 115 10 0 0 0 0.0032683 2 17789 57.434 22.81 3 1.3272 1.6563 0 184010000 80313000 103690000 6453 895 3300 3679 10617;10618 10618 1522 VDGPRSPSYGR 11 0 2 Phospho (STY) _VDGPRS(ph)PSYGR_ VDGPRS(0.985)PS(0.015)YGR VDGPRS(18.17)PS(-18.17)Y(-43.58)GR 0 0 1 1 J3KTL2;Q07955;A8K1L8;J3KSR8;B7Z570 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 645.7912 2 635.782434 1269.55031 76474.03 0.815 0.00051816 0.077338 4.917E-05 0.89233 0.00056733 635.782487976023 645.790784055036 20.008 0.37319 20.008 19.838 20.211 -1.9073E-06 91 17 9 0 0 0 0.001015 2 6931 78.529 36.083 3 0.75283 0.65388 0 69594000 39801000 29793000 6454 895 3300 3679 10619;10620 10620 1522 VDGPRSPSYGR 11 0 2 Phospho (STY) _VDGPRS(ph)PSYGR_ VDGPRS(0.638)PS(0.36)Y(0.002)GR VDGPRS(2.48)PS(-2.48)Y(-24.77)GR 0 0 1 1 J3KTL2;Q07955;A8K1L8;J3KSR8;B7Z570 J3KTL2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 424.1906 3 424.190715 1269.55031 91861.37 -0.073835 -3.132E-05 0.28811 0.00012221 0.21427 9.0893E-05 424.1907794722 430.862963934845 20.009 0.31354 20.009 19.858 20.172 1.9073E-06 74 14 8 0 0 0 0.0066449 1 6916 42.958 17.836 3 0.70027 0.60692 0 44980000 26382000 18598000 6455 895 3300 3679 10621 10621 1522 VDLNEEETILIIR 13 0 1 Unmodified _VDLNEEETILIIR_ 0 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;B3KNW7;B4E0F1;B4DSI8;Q59FZ6;B4DK35;A0A0U1RQE1;P51531;A0A0U1RQZ9;B4DSC8 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 778.9316 2 778.930145 1555.84574 NaN NaN NaN 0.1016 7.9139E-05 NaN NaN NaN NaN 123.35 0.28592 123.35 123.33 123.61 -7.6294E-06 0 0 0 5.8314E-57 2 74708 143.61 96.72 1 NaN NaN 0 4122900 4122900 0 6456 434;1004 3301 3680 10622;10623 10623 VDLNEEETILIIR 13 0 1 Unmodified _VDLNEEETILIIR_ 0 0 0 0 A7E2E1;Q9HBD4;B9EGQ8;P51532;A0A0A0MT49;B3KNW7;B4E0F1;B4DSI8;Q59FZ6;B4DK35;A0A0U1RQE1;P51531;A0A0U1RQZ9;B4DSC8 A7E2E1;P51531 A7E2E1 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 783.9342 2 778.930145 1555.84574 NaN NaN NaN NaN NaN NaN NaN NaN NaN 123.37 1 123.37 122.87 123.87 0 0 0 0 0.0044499 1 74676 47.559 27.255 1 6457 434;1004 3301 3680 10624 10624 VDLYQQASPPDALR 14 0 1 Phospho (STY) _VDLYQQAS(ph)PPDALR_ VDLYQQAS(1)PPDALR VDLY(-36.1)QQAS(36.1)PPDALR 0 0 1 0 P48634;B4DLY2;B4DQ12 P48634 P48634 PRRC2A Protein PRRC2A MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 831.8931 2 826.887627 1651.7607 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.655 1 96.655 96.155 97.155 7.6294E-06 0 0 0 0.00056722 1 54536 51.643 41.272 2 6458 997 3302 3681 10625 10625 1806 VDLYQQASPPDALR 14 0 1 Phospho (STY) _VDLYQQAS(ph)PPDALR_ VDLYQQAS(1)PPDALR VDLY(-55.78)QQAS(55.78)PPDALR 0 0 1 0 P48634;B4DLY2;B4DQ12 P48634 P48634 PRRC2A Protein PRRC2A MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 831.8948 2 826.887627 1651.7607 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.763 1 96.763 96.263 97.263 0 0 0 0 6.86E-06 1 54621 75.911 55.608 2 6459 997 3302 3681 10626 10626 1806 VDLYQQASPPDALR 14 0 1 Phospho (STY) _VDLYQQAS(ph)PPDALR_ VDLYQQAS(1)PPDALR VDLY(-38.53)QQAS(38.53)PPDALR 0 0 1 0 P48634;B4DLY2;B4DQ12 P48634 P48634 PRRC2A Protein PRRC2A ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 831.8921 2 826.887627 1651.7607 NaN NaN NaN -0.42234 -0.00034923 NaN NaN NaN NaN 102.17 1.2877 102.17 101.6 102.89 0 0 0 0 0.0050886 1 65546 44.132 32.9 2 NaN NaN 0 5707900 0 5707900 6460 997 3302 3681 10627 10627 1806 VDNDENEHQLSLR 13 0 1 Unmodified _VDNDENEHQLSLR_ 0 0 0 0 A0A140VJQ2;A0A0S2Z4G7;A4ZU86;A0A0S2Z491;P06748;E5RGW4 A0A140VJQ2 A0A140VJQ2 NPM1 Nucleophosmin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 526.9173 3 523.581497 1567.72266 81103.77 0.3406 0.00017833 0.046662 2.4431E-05 0.38726 0.00020276 523.581450887975 526.917491282063 74.287 1.8298 74.287 73.117 74.947 0 1017 159 10 0 0 0 3.9155E-21 5 37873 136.99 101.34 1 1.1925 1.5096 0 429900000 194500000 235410000 6461 350 3303 3682 10628;10629;10630;10631;10632 10630 VDNDENEHQLSLR 13 0 1 Unmodified _VDNDENEHQLSLR_ 0 0 0 0 A0A140VJQ2;A0A0S2Z4G7;A4ZU86;A0A0S2Z491;P06748;E5RGW4 A0A140VJQ2 A0A140VJQ2 NPM1 Nucleophosmin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 784.8695 2 784.868608 1567.72266 68978.34 0.74426 0.00058415 -0.0015858 -1.2446E-06 0.74268 0.0005829 784.868381868974 789.872894864874 74.261 1.37 74.261 73.328 74.698 0 508 117 6 0 0 0 4.9503E-53 1 37964 172.13 134.94 1 1.1684 1.4727 0 60262000 29159000 31103000 6462 350 3303 3682 10633 10633 VDNDENEHQLSLR 13 0 1 Unmodified _VDNDENEHQLSLR_ 0 0 0 0 A0A140VJQ2;A0A0S2Z4G7;A4ZU86;A0A0S2Z491;P06748;E5RGW4 A0A140VJQ2 A0A140VJQ2 NPM1 Nucleophosmin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 523.5817 3 523.581497 1567.72266 84002.16 0.88514 0.00046344 0.7302 0.00038232 1.6153 0.00084576 523.581780816482 526.917955935673 33.871 1.1789 33.871 33.356 34.535 0 523 91 9 0 0 0 9.0175E-07 1 18371 78.486 42.841 1 0.57301 0.39792 0 39883000 25265000 14618000 6463 350 3303 3682 10634 10634 VDNDENEHQLSLR 13 0 1 Unmodified _VDNDENEHQLSLR_ 0 0 0 0 A0A140VJQ2;A0A0S2Z4G7;A4ZU86;A0A0S2Z491;P06748;E5RGW4 A0A140VJQ2 A0A140VJQ2 NPM1 Nucleophosmin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 784.8693 2 784.868608 1567.72266 70917.02 1.1452 0.00089886 0.046784 3.672E-05 1.192 0.00093557 784.868448751918 789.872594318159 33.919 0.76951 33.919 33.498 34.268 0 201 61 5 0 0 0 0.018932 1 18722 49.423 36.847 1 0.48317 0.38308 0 10695000 7013900 3680800 6464 350 3303 3682 10635 10635 VDPEDTNLNQDSAK 14 1 0 Phospho (STY) _VDPEDTNLNQDS(ph)AK_ VDPEDTNLNQDS(1)AK VDPEDT(-51.49)NLNQDS(51.49)AK 0 0 1 0 Q5F1R6 Q5F1R6 Q5F1R6 DNAJC21 DnaJ homolog subfamily C member 21 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 813.3403 2 813.338164 1624.66178 69731.41 0.94981 0.00077252 -0.026691 -2.1709E-05 0.92312 0.00075081 813.338517492781 817.846820057015 47.536 0.81557 47.536 47.093 47.909 0 167 56 5 0 0 0 3.1818E-06 1 18460 88.507 75.094 2 0.57919 0.68666 0 6154300 3838200 2316100 6465 1095 3304 3683 10636 10636 2065 VDSLEFSLESQK 12 1 0 Phospho (STY) _VDS(ph)LEFSLESQK_ VDS(1)LEFSLESQK VDS(48.65)LEFS(-48.65)LES(-67.95)QK 0 0 1 0 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 735.3376 2 731.329079 1460.64361 72606.14 1.2566 0.00091897 -0.57924 -0.00042362 0.67733 0.00049535 731.328614272328 735.336378389907 103.22 0.7872 103.22 102.91 103.7 0 191 56 6 0 0 0 0.00020308 2 59700 88.075 73.044 3 0.77639 0.9288 0 13761000 7735100 6026300 6466 999 3305 3684 10637;10638 10638 1817 VDSLEFSLESQK 12 1 0 Phospho (STY) _VDS(ph)LEFSLESQK_ VDS(1)LEFSLESQK VDS(45.99)LEFS(-45.99)LES(-51.23)QK 0 0 1 0 P49454 P49454 P49454 CENPF Centromere protein F MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 731.3312 2 731.329079 1460.64361 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.1 1 103.1 102.6 103.6 7.6294E-06 0 0 0 0.00059364 1 59510 59.614 39.827 3 6467 999 3305 3684 10639 10639 1817 VDSLLENLEK 10 1 0 Unmodified _VDSLLENLEK_ 0 0 0 0 G3V576;G3V4W0;B4DY08;B2R5W2;G3V4C1;B2R603;G3V2Q1;A8K9A4;P07910;Q6PKD2;A0A0G2JPF8;A0A0G2JNQ3;P0DMR1;O60812;B7ZW38;B2RXH8;G3V5V7;B4DQQ2;G3V2D6 G3V576 G3V576 HNRNPC;HNRPCL1;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 580.3148 2 580.313886 1158.61322 NaN NaN NaN 0.073661 4.2746E-05 NaN NaN NaN NaN 106.9 0.4693 106.9 106.69 107.16 0 0 0 0 1.198E-09 1 62273 99.815 43.086 1 NaN NaN 0 12009000 12009000 0 6468 503 3306 3685 10640 10640 VDSSTNSSPSPQQSESLSPAHTSDFR 26 0 1 2 Phospho (STY) _VDSSTNSS(ph)PSPQQS(ph)ESLSPAHTSDFR_ VDS(0.041)S(0.041)T(0.047)NS(0.185)S(0.669)PS(0.022)PQQS(0.398)ES(0.338)LS(0.245)PAHT(0.007)S(0.007)DFR VDS(-12.37)S(-12.37)T(-11.75)NS(-5.68)S(5.68)PS(-16.01)PQQS(0.75)ES(-0.75)LS(-2.2)PAHT(-18.26)S(-17.99)DFR 0 0 2 0 F2Z3H6;Q9BQE9 F2Z3H6 F2Z3H6 BCL7B B-cell CLL/lymphoma 7 protein family member B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 974.0646 3 970.060516 2907.15972 61909.95 0.70916 0.00068793 0.30434 0.00029522 1.0135 0.00098316 970.394887848931 973.731036034272 74.831 0.79836 74.831 74.479 75.277 0 527 73 9 0 0 0 3.4612E-09 1 47557 49.944 49.944 55 1.4907 1.0108 0 64678000 28534000 36144000 6469 823 3307 3686 10641 10641 1417;1418 VEDAADSATKPENLSSK 17 2 0 Unmodified _VEDAADSATKPENLSSK_ 0 0 0 1 P46013;Q70L74 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 587.9561 3 587.954889 1760.84284 79194.45 0.71842 0.0004224 1.1653 0.00068514 1.8837 0.0011075 588.289933206973 593.29842778045 61.257 0.6451 61.257 60.873 61.518 -3.8147E-06 275 48 8 0 0 0 0.00034513 2 28021 50.079 50.079 1 1.7882 2.2564 0 59143000 21957000 37186000 6470 994 3308 3687 10642;10643 10643 VEEISPNIR 9 0 1 Phospho (STY) _VEEIS(ph)PNIR_ VEEIS(1)PNIR VEEIS(77.38)PNIR 0 0 1 0 B3KMI9;B4DVI7;Q9UHB9 B3KMI9 B3KMI9 SRP68 Signal recognition particle subunit SRP68 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 573.7759 2 568.771003 1135.52745 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.83 1 71.83 71.33 72.33 0 0 0 0 0.0011347 1 36178 77.379 32.218 1 6471 574 3309 3688 10644 10644 953 VEEISPNIR 9 0 1 Phospho (STY) _VEEIS(ph)PNIR_ VEEIS(1)PNIR VEEIS(93.1)PNIR 0 0 1 0 B3KMI9;B4DVI7;Q9UHB9 B3KMI9 B3KMI9 SRP68 Signal recognition particle subunit SRP68 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 573.7756 2 568.771003 1135.52745 81466.97 0.62467 0.00035529 0.35352 0.00020107 0.97819 0.00055637 568.771403130582 573.775363493609 70.512 1.1584 70.512 69.874 71.033 0 232 101 4 0 0 0 7.3932E-05 3 44142 93.096 54.345 1 2.4995 2.0173 0 7561100 2790400 4770700 6472 574 3309 3688 10645;10646;10647 10645 953 VEETSPLGNAR 11 0 1 Phospho (STY) _VEETS(ph)PLGNAR_ VEET(0.217)S(0.783)PLGNAR VEET(-5.56)S(5.56)PLGNAR 0 0 1 0 Q6M1B8;A0A087WYW3;A0A024R2N6;P30414 Q6M1B8 Q6M1B8 DKFZp686J06106;NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 626.782 2 626.782099 1251.54965 NaN NaN NaN 0.072496 4.5439E-05 NaN NaN NaN NaN 50.896 0.91917 50.896 50.418 51.337 0 0 0 0 0.0011961 1 20482 73.632 30.12 2 NaN NaN 0 2783400 2783400 0 6473 67 3310 3689 10648 10648 90 VEFMDDTSR 9 0 1 Oxidation (M) _VEFM(ox)DDTSR_ VEFM(1)DDTSR VEFM(50.8)DDTSR 0 1 0 0 B2R4R9;P62857 B2R4R9 B2R4R9 RPS28 40S ribosomal protein S28 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 563.2427 2 558.237321 1114.46009 NaN NaN NaN NaN NaN NaN NaN NaN NaN 54.072 1 54.072 53.572 54.572 0 0 0 0 0.010753 1 22809 50.805 16.084 1 6474 529 3311 3690 10649 10649 139 VEILANDQGNR 11 0 1 Unmodified _VEILANDQGNR_ 0 0 0 0 Q53FC7;B3KSM6;B2R6X5;P17066;P48741 Q53FC7 Q53FC7 HSPA6;HSPA7 Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 619.8234 2 614.817658 1227.62076 78264.46 0.58189 0.00035776 -0.27604 -0.00016972 0.30585 0.00018804 614.817184386398 619.821924643699 63.262 1.2281 63.262 62.252 63.48 0 264 103 5 0 0 0 4.3912E-09 1 29782 118.71 0 1 0.92731 1.1404 0 26293000 12693000 13600000 6475 534 3312 3691 10650 10650 VEILANDQGNR 11 0 1 Unmodified _VEILANDQGNR_ 0 0 0 0 Q53FC7;B3KSM6;B2R6X5;P17066;P48741 Q53FC7 Q53FC7 HSPA6;HSPA7 Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 619.8222 2 614.817658 1227.62076 NaN NaN NaN 0.096743 5.9479E-05 NaN NaN NaN NaN 61.824 0.44637 61.824 61.679 62.126 3.8147E-06 0 0 0 3.4096E-06 1 28623 93.111 0 1 NaN NaN 0 8134100 0 8134100 6476 534 3312 3691 10651 10651 VEILANDQGNR 11 0 1 Unmodified _VEILANDQGNR_ 0 0 0 0 Q53FC7;B3KSM6;B2R6X5;P17066;P48741 Q53FC7 Q53FC7 HSPA6;HSPA7 Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 619.8224 2 614.817658 1227.62076 NaN NaN NaN -0.092637 -5.6955E-05 NaN NaN NaN NaN 62.767 0.58907 62.767 62.405 62.994 0 0 0 0 0.0051921 1 29237 65.347 0 1 NaN NaN 0 7379800 0 7379800 6477 534 3312 3691 10652 10652 VEILANDQGNR 11 0 1 Unmodified _VEILANDQGNR_ 0 0 0 0 Q53FC7;B3KSM6;B2R6X5;P17066;P48741 Q53FC7 Q53FC7 HSPA6;HSPA7 Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 614.818 2 614.817658 1227.62076 77735.09 0.7884 0.00048472 0.24178 0.00014865 1.0302 0.00063337 614.817782305213 619.82191020895 38.142 0.87854 38.142 37.824 38.702 0 401 79 8 0 0 0 5.0157E-08 2 21785 107.21 0 1 1.1396 0.7902 0 40771000 19604000 21168000 6478 534 3312 3691 10653;10654 10654 VEILNEHRGEK 11 1 1 Unmodified _VEILNEHRGEK_ 0 0 0 1 Q9NTJ3;E9PD53;B3KXX5;Q6P169;C9JR83;Q6NSG3;Q58F29 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 441.9056 3 441.905364 1322.69426 92801.73 0.48929 0.00021622 -0.0081715 -3.611E-06 0.48112 0.00021261 441.9052773456 447.912854999821 95.867 0.17173 95.867 95.775 95.947 -7.6294E-06 43 14 5 0 0 0 0.026694 1 53913 48.948 35.763 1 0.86758 0.96507 0 15339000 7180100 8159000 6479 1220 3313 3692 10655 10655 VELCSFSGYK 10 1 0 Unmodified _VELCSFSGYK_ 0 0 0 0 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 C9JXB8 RPL24;HEL-S-310 60S ribosomal protein L24 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 599.29 2 595.281531 1188.54851 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.327 1 89.327 88.827 89.827 0 0 0 0 0.021783 1 48926 44.203 20.048 1 6480 745 3314 3693 10656 10656 VELEGLK 7 1 0 Unmodified _VELEGLK_ 0 0 0 0 A0A0S2Z475;A0A0S2Z4A3;A0A0S2Z4T6;O76083 A0A0S2Z475 A0A0S2Z475 PDE9A High affinity cGMP-specific 3,5-cyclic phosphodiesterase 9A ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 398.2338 2 394.231636 786.448719 NaN NaN NaN 1.4188 0.00055932 NaN NaN NaN NaN 57.718 0.3648 57.718 57.683 58.047 3.8147E-06 0 0 0 0.015602 1 35560 60.788 8.1047 1 NaN NaN 0 3313700 0 3313700 6481 349 3315 3694 10657 10657 VELQELNDR 9 0 1 Unmodified _VELQELNDR_ 0 0 0 0 V9HWE1;Q53HU8;P08670;B3KRK8;B0YJC4;A0A1B0GUA0;A0A1B0GTT5;Q9H319;Q53SB5;Q45VM8;Q45VM7;Q45VM6;L7RDA5;A5Z217;P17661;B4DUI0 V9HWE1 V9HWE1 HEL113;VIM;tmp_locus_29;DES Vimentin;Desmin ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 563.2928 2 558.288202 1114.56185 NaN NaN NaN 0.12497 6.9767E-05 NaN NaN NaN NaN 56.391 0.2735 56.391 56.19 56.463 0 0 0 0 0.013504 1 34604 59.35 21.791 1 NaN NaN 0 1421700 0 1421700 6482 960 3316 3695 10658 10658 VELQELNDR 9 0 1 Unmodified _VELQELNDR_ 0 0 0 0 V9HWE1;Q53HU8;P08670;B3KRK8;B0YJC4;A0A1B0GUA0;A0A1B0GTT5;Q9H319;Q53SB5;Q45VM8;Q45VM7;Q45VM6;L7RDA5;A5Z217;P17661;B4DUI0 V9HWE1 V9HWE1 HEL113;VIM;tmp_locus_29;DES Vimentin;Desmin MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 563.2918 2 558.288202 1114.56185 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.189 1 57.189 56.689 57.689 -3.8147E-06 0 0 0 0.0016662 1 35181 78.334 35.088 1 6483 960 3316 3695 10659 10659 VELQELNDR 9 0 1 Unmodified _VELQELNDR_ 0 0 0 0 V9HWE1;Q53HU8;P08670;B3KRK8;B0YJC4;A0A1B0GUA0;A0A1B0GTT5;Q9H319;Q53SB5;Q45VM8;Q45VM7;Q45VM6;L7RDA5;A5Z217;P17661;B4DUI0 V9HWE1 V9HWE1 HEL113;VIM;tmp_locus_29;DES Vimentin;Desmin MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 563.2917 2 558.288202 1114.56185 NaN NaN NaN NaN NaN NaN NaN NaN NaN 57.232 1 57.232 56.732 57.732 0 0 0 0 0.0051046 1 35210 66.692 20.266 1 6484 960 3316 3695 10660 10660 VEMYSGSDDDDDFNK 15 1 0 Oxidation (M),2 Phospho (STY) _VEM(ox)YS(ph)GS(ph)DDDDDFNK_ VEM(1)YSGSDDDDDFNK VEMY(0.604)S(0.698)GS(0.698)DDDDDFNK VEM(47.97)YSGSDDDDDFNK VEMY(-1.18)S(1.18)GS(1.18)DDDDDFNK 0 1 2 0 A0JLR8;Q05CQ1;Q8N5A0;A0A087WUT6;O60841 A0JLR8 A0JLR8 EIF5B Eukaryotic translation initiation factor 5B MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 956.7972 2 956.797027 1911.5795 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.093 1 51.093 50.593 51.593 0 0 0 0 0.0003365 1 20779 47.971 41.243 3 6485 248 3317 3696 10661 10661 61 393;394 VEMYSGSDDDDDFNK 15 1 0 Oxidation (M),2 Phospho (STY) _VEM(ox)YS(ph)GS(ph)DDDDDFNK_ VEM(1)YSGSDDDDDFNK VEMY(0.349)S(0.726)GS(0.925)DDDDDFNK VEM(53.92)YSGSDDDDDFNK VEMY(-3.77)S(3.77)GS(9.36)DDDDDFNK 0 1 2 0 A0JLR8;Q05CQ1;Q8N5A0;A0A087WUT6;O60841 A0JLR8 A0JLR8 EIF5B Eukaryotic translation initiation factor 5B MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 960.8054 2 956.797027 1911.5795 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.225 1 51.225 50.725 51.725 0 0 0 0 5.9369E-05 1 20871 53.924 47.482 3 6486 248 3317 3696 10662 10662 61 393;394 VEMYSGSDDDDDFNK 15 1 0 Oxidation (M),Phospho (STY) _VEM(ox)YSGS(ph)DDDDDFNK_ VEM(1)YSGSDDDDDFNK VEMY(0.001)S(0.047)GS(0.952)DDDDDFNK VEM(67.14)YSGSDDDDDFNK VEMY(-29.96)S(-13.05)GS(13.05)DDDDDFNK 0 1 1 0 A0JLR8;Q05CQ1;Q8N5A0;A0A087WUT6;O60841 A0JLR8 A0JLR8 EIF5B Eukaryotic translation initiation factor 5B MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 920.8208 2 916.813861 1831.61317 NaN NaN NaN NaN NaN NaN NaN NaN NaN 51.841 1 51.841 51.341 52.341 -3.8147E-06 0 0 0 1.8301E-06 1 21262 67.136 56.031 3 6487 248 3317 3697 10663 10663 61 393;394 VENSNTVRTPEENGNLGK 18 1 1 Phospho (STY) _VENSNTVRT(ph)PEENGNLGK_ VENSNT(0.032)VRT(0.967)PEENGNLGK VENS(-35.89)NT(-14.76)VRT(14.76)PEENGNLGK 0 0 1 1 A6NHN7;A6NHB5;Q14202 A6NHN7 A6NHN7 ZMYM3 Zinc finger MYM-type protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 685.988 3 679.979419 2036.91643 69676.98 0.47554 0.00032336 -4.3163 -0.002935 -3.8407 -0.0026116 680.310544367639 686.318517732302 50.223 1.1645 50.223 49.826 50.99 0 580 98 9 0 0 0 2.7024E-13 2 20245 91.475 68.302 3 0.55208 0.64903 0 40859000 26864000 13995000 6488 426 3318 3698 10664;10665 10664 2726 VENSNTVRTPEENGNLGK 18 1 1 Phospho (STY) _VENSNTVRT(ph)PEENGNLGK_ VENSNT(0.008)VRT(0.992)PEENGNLGK VENS(-46.55)NT(-21.19)VRT(21.19)PEENGNLGK 0 0 1 1 A6NHN7;A6NHB5;Q14202 A6NHN7 A6NHN7 ZMYM3 Zinc finger MYM-type protein 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 679.9802 3 679.979419 2036.91643 73134.26 0.84029 0.00057138 0.14115 9.5976E-05 0.98143 0.00066735 679.979570550772 685.987006744486 29.326 0.77668 29.326 29.036 29.813 0 276 54 7 0 0 0 1.1686E-23 2 14974 111.66 82.215 3 1.6685 1.2865 0 49946000 19624000 30321000 6489 426 3318 3698 10666;10667 10667 2726 VEPADSVESSPPSITHSPQNELK 23 1 0 Phospho (STY) _VEPADSVESSPPSITHS(ph)PQNELK_ VEPADSVES(0.056)S(0.056)PPS(0.268)IT(0.218)HS(0.4)PQNELK VEPADS(-33.82)VES(-8.51)S(-8.51)PPS(-1.74)IT(-2.64)HS(1.74)PQNELK 0 0 1 0 B7Z4V7;Q2TB10 B7Z4V7 B7Z4V7 ZNF800 Zinc finger protein 800 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 843.7237 3 843.389924 2527.14794 68393 0.52599 0.00044362 -0.063916 -5.3906E-05 0.46208 0.00038971 843.724250503465 846.395301830874 84.891 0.64986 84.891 84.547 85.197 0 186 59 5 0 0 0 1.2869E-09 3 45681 59.539 59.539 6 0.72016 0.90602 0 29058000 17406000 11652000 6490 705 3319 3699 10668;10669;10670 10669 1168;1169;1170;2801 VEPADSVESSPPSITHSPQNELK 23 1 0 2 Phospho (STY) _VEPADSVESS(ph)PPSITHS(ph)PQNELK_ VEPADS(0.001)VES(0.225)S(0.75)PPS(0.027)IT(0.035)HS(0.963)PQNELK VEPADS(-31)VES(-5.23)S(5.23)PPS(-15.58)IT(-14.93)HS(14.93)PQNELK 0 0 2 0 B7Z4V7;Q2TB10 B7Z4V7 B7Z4V7 ZNF800 Zinc finger protein 800 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 870.3806 3 870.045368 2607.11427 65301.21 0.63512 0.00055258 0.07902 6.8751E-05 0.71414 0.00062134 870.379687600846 873.051282841719 88.386 1.3735 88.386 87.64 89.013 0 975 122 12 0 0 0 1.7788E-30 3 48131 109.08 109.08 15 0.894 1.1059 0 284410000 142350000 142060000 6491 705 3319 3700 10671;10672;10673 10672 1168;1169;1170;2801 VEPADSVESSPPSITHSPQNELK 23 1 0 2 Phospho (STY) _VEPADSVESS(ph)PPS(ph)ITHSPQNELK_ VEPADS(0.061)VES(0.174)S(0.595)PPS(0.43)IT(0.393)HS(0.346)PQNELK VEPADS(-10.35)VES(-5.57)S(5.57)PPS(0.72)IT(-0.72)HS(-1.42)PQNELK 0 0 2 0 B7Z4V7;Q2TB10 B7Z4V7 B7Z4V7 ZNF800 Zinc finger protein 800 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 870.3825 3 870.045368 2607.11427 64679.57 0.74876 0.00065146 1.3143 0.0011435 2.0631 0.001795 870.380814986665 873.052200647068 94.251 1.3375 94.251 93.668 95.005 0 858 122 11 0 0 0 2.4206E-05 1 60528 40.454 40.454 15 1.4985 1.0012 0 206700000 86508000 120190000 6492 705 3319 3700 10674 10674 1168;1169;1170;2801 VEPADSVESSPPSITHSPQNELK 23 1 0 3 Phospho (STY) _VEPADSVESS(ph)PPS(ph)IT(ph)HSPQNELK_ VEPADS(0.016)VES(0.221)S(0.766)PPS(0.966)IT(0.646)HS(0.385)PQNELK VEPADS(-17.09)VES(-5.5)S(5.5)PPS(13.04)IT(2.44)HS(-2.44)PQNELK 0 0 3 0 B7Z4V7;Q2TB10 B7Z4V7 B7Z4V7 ZNF800 Zinc finger protein 800 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 899.7082 3 896.700811 2687.0806 64361.28 0.45582 0.00040874 0.08707 7.8075E-05 0.54289 0.00048681 897.034948455511 899.70614981188 92.057 1.0506 92.057 91.563 92.614 0 729 92 10 0 0 0 1.3558E-13 2 51203 70.67 62.866 20 0.95605 1.1845 0 139070000 67472000 71598000 6493 705 3319 3701 10675;10676 10676 1168;1169;1170;2801 VEPEVLSTDTQTSPEPGTR 19 0 1 Phospho (STY) _VEPEVLSTDTQTS(ph)PEPGTR_ VEPEVLSTDTQT(0.138)S(0.846)PEPGT(0.015)R VEPEVLS(-44.96)T(-46.64)DT(-32.6)QT(-7.87)S(7.87)PEPGT(-17.47)R 0 0 1 0 P29375;B4DVM9 P29375 P29375 KDM5A Lysine-specific demethylase 5A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1062.4841 2 1061.98064 2121.94672 59280.63 0.36981 0.00039274 0.38117 0.00040479 0.75098 0.00079753 1062.48236577029 1067.48682077843 79.795 0.88885 79.795 79.32 80.208 -7.6294E-06 417 81 7 0 0 0 5.9444E-29 3 42048 118.24 95.254 6 0.65403 0.82454 0 61898000 32199000 29700000 6494 980 3320 3702 10677;10678;10679 10679 1736;2881 VEPEVLSTDTQTSPEPGTR 19 0 1 Phospho (STY) _VEPEVLSTDTQT(ph)SPEPGTR_ VEPEVLS(0.002)T(0.011)DT(0.107)QT(0.536)S(0.33)PEPGT(0.014)R VEPEVLS(-24.56)T(-16.98)DT(-6.98)QT(2.1)S(-2.1)PEPGT(-15.77)R 0 0 1 0 P29375;B4DVM9 P29375 P29375 KDM5A Lysine-specific demethylase 5A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1067.4886 2 1061.98064 2121.94672 61095.68 0.69713 0.00074034 0.79802 0.00084748 1.4951 0.0015878 1062.48251888117 1067.48712554661 82.629 0.68121 82.629 82.33 83.012 0 342 61 8 0 0 0 2.0396E-09 1 52881 79.875 71.56 6 1.0774 0.7381 0 48709000 22798000 25912000 6495 980 3320 3702 10680 10680 1736;2881 VEPVALAPSPVIPR 14 0 1 Phospho (STY) _VEPVALAPS(ph)PVIPR_ VEPVALAPS(1)PVIPR VEPVALAPS(87.52)PVIPR 0 0 1 0 Q5VWG9 Q5VWG9 Q5VWG9 TAF3 Transcription initiation factor TFIID subunit 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 762.9131 2 762.912917 1523.81128 71622.77 0.87322 0.00066619 -0.078486 -5.9878E-05 0.79473 0.00060631 762.91272740891 767.917170342579 116.15 0.52234 116.15 115.91 116.44 0 190 47 6 0 0 0 4.2221E-06 2 69283 87.519 77.566 1 0.3657 0.44025 0 18442000 14784000 3657600 6496 1112 3321 3703 10681;10682 10681 2104 VEPVALAPSPVIPR 14 0 1 Phospho (STY) _VEPVALAPS(ph)PVIPR_ VEPVALAPS(1)PVIPR VEPVALAPS(74.3)PVIPR 0 0 1 0 Q5VWG9 Q5VWG9 Q5VWG9 TAF3 Transcription initiation factor TFIID subunit 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 767.9179 2 762.912917 1523.81128 71245.05 1.1477 0.00087557 0.099557 7.5953E-05 1.2472 0.00095152 762.913019344452 767.917028968206 123.53 0.53172 123.53 123.3 123.83 -7.6294E-06 231 52 6 0 0 0 0.00018006 1 79882 74.296 64.343 1 1.014 0.80418 0 9807400 4265200 5542200 6497 1112 3321 3703 10683 10683 2104 VEQATKPSFESGR 13 1 1 Unmodified _VEQATKPSFESGR_ 0 0 0 1 H0Y6E7;H3BT71;B4E352;P38159 H0Y6E7 H0Y6E7 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 485.2518 3 479.244045 1434.71031 85235.05 0.30608 0.00014669 0.62862 0.00030126 0.9347 0.00044795 479.244474159541 485.251506845806 64.949 0.48166 64.949 64.75 65.232 0 149 34 7 0 0 0 4.5947E-06 1 31070 94.728 78.972 1 0.93217 1.1108 0 85013000 40039000 44974000 6498 684 3322 3704 10684 10684 VEQLAR 6 0 1 Unmodified _VEQLAR_ 0 0 0 0 Q3B787;F8VYN8;A0A0A0MS84;A0A024RBD4;J3KNW7;Q9Y592 Q3B787 Q3B787 CCDC41;CEP83 Centrosomal protein of 83 kDa ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 358.2085 2 358.208495 714.402438 NaN NaN NaN 0.22986 8.2338E-05 NaN NaN NaN NaN 63.844 0.71254 63.844 63.197 63.909 0 0 0 0 0.00080501 1 30005 71.995 0 1 NaN NaN 0 83671000 83671000 0 6499 195 3323 3705 10685 10685 VEQLSPEEEEK 11 1 0 Phospho (STY) _VEQLS(ph)PEEEEK_ VEQLS(1)PEEEEK VEQLS(126.83)PEEEEK 0 0 1 0 G3V5J9;Q6FG41;P01100 G3V5J9 G3V5J9 FOS Proto-oncogene c-Fos ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 698.7987 2 698.797612 1395.58067 NaN NaN NaN 0.32898 0.00022989 NaN NaN NaN NaN 48.392 0.98531 48.392 47.957 48.942 0 0 0 0 1.1472E-31 1 18961 126.83 90.511 1 NaN NaN 0 7864900 7864900 0 6500 842 3324 3706 10686 10686 1446 VESLESLYFTPIPAR 15 0 1 Phospho (STY) _VES(ph)LESLYFTPIPAR_ VES(1)LESLYFTPIPAR VES(44.53)LES(-44.53)LY(-90.07)FT(-106.11)PIPAR 0 0 1 0 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q96HN5;H0YFY6;Q7Z757;Q59HB8 A0A087WY61 A0A087WY61 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 906.4462 2 901.442235 1800.86992 65034.63 0.81318 0.00073304 -0.11289 -0.00010176 0.70029 0.00063127 901.943720511412 906.44605006751 130.71 0.80411 130.71 130.4 131.21 -1.5259E-05 511 75 11 0 0 0 1.4268E-23 2 79387 123.02 112.83 4 0.48733 0.61513 0 84791000 55738000 29053000 6501 110 3325 3707 10687;10688 10688 153;2638 VESLESLYFTPIPAR 15 0 1 2 Phospho (STY) _VES(ph)LESLYFT(ph)PIPAR_ VES(1)LESLYFT(1)PIPAR VES(94.68)LES(-87.39)LY(-79.44)FT(79.44)PIPAR 0 0 2 0 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q96HN5;H0YFY6;Q7Z757;Q59HB8 A0A087WY61 A0A087WY61 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 941.4272 2 941.4254 1880.83625 62870.97 0.60173 0.00056649 -0.047622 -4.4833E-05 0.55411 0.00052166 941.425381569064 946.429569166034 132.31 0.80644 132.31 131.98 132.79 -1.5259E-05 410 68 9 0 0 0 3.8947E-121 3 80447 205.52 191.8 6 0.23736 0.29875 0 49181000 38975000 10206000 6502 110 3325 3708 10689;10690;10691 10691 153;2638 VESQEREDVLAGMSGK 16 1 1 Oxidation (M),Phospho (STY) _VESQEREDVLAGM(ox)S(ph)GK_ VESQEREDVLAGM(1)SGK VESQEREDVLAGMS(1)GK VESQEREDVLAGM(65.25)SGK VES(-47.19)QEREDVLAGMS(47.19)GK 0 1 1 1 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B4DKD0;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 611.2704 3 610.936162 1829.78666 75337.7 0.72101 0.00044049 1.6687 0.0010195 2.3897 0.00146 610.936206379258 617.280290218059 60.544 1.0996 60.544 60.112 61.212 -3.8147E-06 360 76 8 0 0 0 3.1557E-05 1 27316 65.25 46.214 2 1.4806 1.7702 0 109670000 45712000 63958000 6503 1032 3326 3709 10692 10692 296 1876 VESQEREDVLAGMSGK 16 1 1 Oxidation (M) _VESQEREDVLAGM(ox)SGK_ VESQEREDVLAGM(1)SGK VESQEREDVLAGM(67.42)SGK 0 1 0 1 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B4DKD0;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 584.6163 3 584.280719 1749.82033 78620.83 0.74423 0.00043484 -0.52937 -0.0003093 0.21487 0.00012554 584.280533665752 590.287838483983 67.558 0.34717 67.558 67.396 67.743 0 109 29 6 0 0 0 0.00011032 1 33225 67.416 40.081 1 0.63873 0.74677 0 35176000 20272000 14905000 6504 1032 3326 3710 10693 10693 296 VETLSPESALQGSPR 15 0 1 2 Phospho (STY) _VETLS(ph)PESALQGS(ph)PR_ VET(0.038)LS(0.958)PES(0.413)ALQGS(0.591)PR VET(-13.7)LS(13.7)PES(-1.54)ALQGS(1.54)PR 0 0 2 0 I6ZZT5;Q99958 I6ZZT5 I6ZZT5 FOXC2 Forkhead box protein C2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 870.8792 2 865.873532 1729.73251 65230.89 1.2241 0.0010599 -0.44575 -0.00038597 0.77838 0.00067398 865.872850204357 870.877232444189 97.137 0.87294 97.137 96.689 97.562 0 337 73 6 0 0 0 0.0015594 2 54641 42.913 36.53 6 0.63366 0.79814 0 54695000 32179000 22517000 6505 889 3327 3711 10694;10695 10695 1504;1505 VETLSPESALQGSPR 15 0 1 2 Phospho (STY) _VETLS(ph)PESALQGS(ph)PR_ VET(0.02)LS(0.979)PES(0.001)ALQGS(1)PR VET(-16.82)LS(16.82)PES(-32.12)ALQGS(35.35)PR 0 0 2 0 I6ZZT5;Q99958 I6ZZT5 I6ZZT5 FOXC2 Forkhead box protein C2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 865.8748 2 865.873532 1729.73251 64743.55 1.1514 0.00099694 0.49661 0.00043 1.648 0.0014269 865.87352818373 870.877810294114 107.53 0.96232 107.53 107.03 107.99 0 500 91 8 0 0 0 0.00023473 1 69151 70.335 63.802 6 0.42075 0.28567 0 60668000 43614000 17053000 6506 889 3327 3711 10696 10696 1504;1505 VETVSQPSESPKDTIDK 17 2 0 Phospho (STY) _VETVSQPSESPKDT(ph)IDK_ VETVS(0.013)QPS(0.307)ES(0.307)PKDT(0.372)IDK VET(-32.39)VS(-14.41)QPS(-0.82)ES(-0.82)PKDT(0.82)IDK 0 0 1 1 Q05BS8;A0A0A0MTP7;B4DZM2;B2RA91;F8VXG7;Q99590 Q05BS8 Q05BS8 SFRS2IP;SCAF11 Protein SCAF11 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 647.3014 3 647.301387 1938.88233 74708.87 0.75489 0.00048864 0.11727 7.591E-05 0.87216 0.00056455 647.301359852325 652.644352338113 58.397 0.93364 58.397 57.949 58.882 3.8147E-06 456 74 8 0 0 0 0.00018992 1 25666 43.534 33.954 5 0.77418 0.96797 0 42671000 25745000 16927000 6507 300 3328 3712 10697 10697 479;2684 VETVSQPSESPKDTIDK 17 2 0 Phospho (STY) _VETVSQPS(ph)ESPKDTIDK_ VETVS(0.019)QPS(0.492)ES(0.398)PKDT(0.09)IDK VET(-31.55)VS(-14.03)QPS(0.92)ES(-0.92)PKDT(-7.36)IDK 0 0 1 1 Q05BS8;A0A0A0MTP7;B4DZM2;B2RA91;F8VXG7;Q99590 Q05BS8 Q05BS8 SFRS2IP;SCAF11 Protein SCAF11 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 647.6363 3 647.301387 1938.88233 75107.7 1.0248 0.00066337 0.045049 2.916E-05 1.0699 0.00069253 647.635729696368 652.644217401579 45.878 1.6598 45.878 44.977 46.637 0 968 151 9 0 0 0 2.5277E-05 1 27081 55.588 38.708 5 0.94244 0.7151 0 51937000 25605000 26332000 6508 300 3328 3712 10698 10698 479;2684 VEVNTNSGEIIHK 13 1 0 2 Phospho (STY) _VEVNT(ph)NS(ph)GEIIHK_ VEVNT(1)NS(1)GEIIHK VEVNT(55.34)NS(55.34)GEIIHK 0 0 2 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 804.8535 2 800.34441 1598.67427 67954.22 0.8124 0.0006502 -0.35535 -0.0002844 0.45705 0.0003658 800.344469171892 804.350969029336 61.617 0.8575 61.617 61.382 62.24 0 172 57 4 0 0 0 0.0038876 1 28422 55.335 42.379 1 0.4627 0.58439 0 46705000 31112000 15593000 6509 1167 3329 3713 10699 10699 2274;2969 VEVNTNSGEIIHK 13 1 0 Phospho (STY) _VEVNTNS(ph)GEIIHK_ VEVNT(0.062)NS(0.938)GEIIHK VEVNT(-11.78)NS(11.78)GEIIHK 0 0 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 507.2439 3 507.243256 1518.70794 84355.86 0.2063 0.00010464 -0.10334 -5.2419E-05 0.10296 5.2224E-05 507.243206138304 509.914597670449 65.965 1.2025 65.965 65.556 66.759 0 558 89 9 0 0 0 0.00024793 2 32285 76.341 64.44 2 0.54289 0.67073 0 502750000 320450000 182290000 6510 1167 3329 3714 10700;10701 10701 2274;2969 VEVNTNSGEIIHK 13 1 0 Phospho (STY) _VEVNTNS(ph)GEIIHK_ VEVNT(0.004)NS(0.996)GEIIHK VEVNT(-23.9)NS(23.9)GEIIHK 0 0 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 764.3686 2 760.361245 1518.70794 70767.34 0.66455 0.0005053 -0.32147 -0.00024443 0.34309 0.00026087 760.361087172089 764.368143528533 65.954 0.92258 65.954 65.577 66.5 0 416 70 9 0 0 0 3.461E-16 3 31704 119.96 99.236 2 0.53189 0.65891 0 146210000 94353000 51853000 6511 1167 3329 3714 10702;10703;10704 10703 2274;2969 VEVNTNSGEIIHK 13 1 0 Phospho (STY) _VEVNTNS(ph)GEIIHK_ VEVNT(0.026)NS(0.974)GEIIHK VEVNT(-15.75)NS(15.75)GEIIHK 0 0 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 509.9147 3 507.243256 1518.70794 84069.09 0.72288 0.00036667 -0.1493 -7.5733E-05 0.57357 0.00029094 507.24326176403 509.914520834232 50.876 3.1159 50.876 49.716 52.832 3.8147E-06 1469 286 10 0 0 0 0.00032079 2 30855 73.833 56.755 2 0.93325 0.62356 0 201240000 102220000 99024000 6512 1167 3329 3714 10705;10706 10706 2274;2969 VEVNTNSGEIIHK 13 1 0 Phospho (STY) _VEVNTNS(ph)GEIIHK_ VEVNTNS(1)GEIIHK VEVNT(-53.65)NS(53.65)GEIIHK 0 0 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 760.3619 2 760.361245 1518.70794 69781.79 1.1419 0.00086822 -0.40659 -0.00030916 0.73526 0.00055906 760.361118927488 764.368486580086 50.868 2.0079 50.868 50.074 52.081 0 922 181 8 0 0 0 8.2093E-96 2 30786 203.93 178.72 2 1.0276 0.68387 0 94470000 47018000 47453000 6513 1167 3329 3714 10707;10708 10708 2274;2969 VEVNTNSGEIIHK 13 1 0 Unmodified _VEVNTNSGEIIHK_ 0 0 0 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 483.2591 3 480.587812 1438.74161 87904.53 0.4585 0.00022035 -0.25284 -0.00012151 0.20566 9.8836E-05 480.587681720709 483.259009480839 75.414 0.84227 75.414 74.865 75.707 0 229 72 4 0 0 0 9.283E-05 3 38873 81.494 71.168 1 0.80588 1.0219 0 41649000 23940000 17709000 6514 1167 3329 3715 10709;10710;10711 10711 VEYISSPLK 9 1 0 Phospho (STY) _VEYISS(ph)PLK_ VEYIS(0.235)S(0.765)PLK VEY(-39.18)IS(-5.13)S(5.13)PLK 0 0 1 0 Q15697 Q15697 Q15697 ZNF174 Zinc finger protein 174 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 558.2727 2 558.272848 1114.53114 NaN NaN NaN 0.90325 0.00050426 NaN NaN NaN NaN 83.877 0.77953 83.877 83.424 84.204 0 0 0 0 0.0023314 1 44865 70.412 45.574 3 NaN NaN 0 8793500 8793500 0 6515 1072 3330 3716 10712 10712 2027;2028 VEYISSPLK 9 1 0 Phospho (STY) _VEYIS(ph)SPLK_ VEYIS(0.5)S(0.5)PLK VEY(-42.96)IS(0)S(0)PLK 0 0 1 0 Q15697 Q15697 Q15697 ZNF174 Zinc finger protein 174 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 562.2803 2 558.272848 1114.53114 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.899 1 83.899 83.399 84.399 0 0 0 0 0.0028679 1 45076 67.113 28.546 3 6516 1072 3330 3716 10713 10713 2027;2028 VEYISSPLK 9 1 0 Phospho (STY) _VEYIS(ph)SPLK_ VEYIS(0.654)S(0.346)PLK VEY(-45.35)IS(2.76)S(-2.76)PLK 0 0 1 0 Q15697 Q15697 Q15697 ZNF174 Zinc finger protein 174 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 562.2806 2 558.272848 1114.53114 81800.52 0.65274 0.00036441 0.21985 0.00012274 0.87259 0.00048714 558.272803611814 562.279969505598 85.092 0.81451 85.092 84.663 85.478 0 299 76 6 0 0 0 0.00083616 2 54414 77.288 49.959 3 1.6263 1.2668 0 14357000 5793500 8563800 6517 1072 3330 3716 10714;10715 10714 2027;2028 VEYSEEELK 9 1 0 Unmodified _VEYSEEELK_ 0 0 0 0 B4DE32;B1AHC9;B2RDN9;A0A024R1N4;P12956;B4E356;Q6IC76 B4DE32 B4DE32 XRCC6;G22P1 X-ray repair cross-complementing protein 6 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 563.27 2 563.269144 1124.52373 NaN NaN NaN 0.72457 0.00040813 NaN NaN NaN NaN 63.835 0.51476 63.835 63.627 64.142 -3.8147E-06 0 0 0 0.016932 1 30087 53.493 11.097 1 NaN NaN 0 7398600 7398600 0 6518 50 3331 3717 10716 10716 VFCVEEEDSESSLQK 15 1 0 Phospho (STY) _VFCVEEEDS(ph)ESSLQK_ VFCVEEEDS(0.839)ES(0.138)S(0.023)LQK VFCVEEEDS(7.85)ES(-7.85)S(-15.58)LQK 0 0 1 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 933.3808 2 933.379172 1864.74379 NaN NaN NaN -0.5117 -0.00047761 NaN NaN NaN NaN 79.827 0.32735 79.827 79.542 79.87 0 0 0 0 1.2722E-07 1 42043 89.466 59.976 3 NaN NaN 0 6840500 6840500 0 6519 1060 3332 3718 10717 10717 1992 VFCVEEEDSESSLQK 15 1 0 Phospho (STY) _VFCVEEEDS(ph)ESSLQK_ VFCVEEEDS(0.772)ES(0.183)S(0.045)LQK VFCVEEEDS(6.26)ES(-6.26)S(-12.36)LQK 0 0 1 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 937.387 2 933.379172 1864.74379 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.575 1 79.575 79.075 80.075 -7.6294E-06 0 0 0 0.0002842 1 41974 53.3 38.881 3 6520 1060 3332 3718 10718 10718 1992 VFCVEEEDSESSLQK 15 1 0 Phospho (STY) _VFCVEEEDS(ph)ESSLQK_ VFCVEEEDS(0.9)ES(0.077)S(0.023)LQK VFCVEEEDS(10.66)ES(-10.66)S(-15.94)LQK 0 0 1 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 933.8789 2 933.379172 1864.74379 63574.74 0.85899 0.00080177 -0.51185 -0.00047775 0.34715 0.00032402 933.880108274219 937.38599666702 82.465 0.71689 82.465 82.126 82.843 0 347 64 8 0 0 0 1.5911E-08 2 52809 95.822 85.337 3 2.2934 1.5075 0 55797000 16641000 39156000 6521 1060 3332 3718 10719;10720 10720 1992 VFDDESDEKEDEEYADEK 18 2 0 Phospho (STY) _VFDDES(ph)DEKEDEEYADEK_ VFDDES(1)DEKEDEEYADEK VFDDES(77.96)DEKEDEEY(-77.96)ADEK 0 0 1 1 O43719 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1144.4358 2 1136.42047 2270.82639 NaN NaN NaN 0.47574 0.00054064 NaN NaN NaN NaN 63.273 1.2214 63.273 62.802 64.023 0 0 0 0 3.7925E-16 1 29980 103.87 82.238 2 NaN NaN 0 104350000 0 104350000 6522 927 3333 3719 10721 10721 1568 VFDLQFSTDSPR 12 0 1 Phospho (STY) _VFDLQFSTDS(ph)PR_ VFDLQFS(0.001)T(0.014)DS(0.984)PR VFDLQFS(-28.97)T(-18.32)DS(18.32)PR 0 0 1 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 746.3306 2 746.329414 1490.64427 69273.38 1.0119 0.00075521 0.086846 6.4815E-05 1.0987 0.00082002 746.330091334025 751.333400230043 112.82 2.3294 112.82 112.1 114.43 -7.6294E-06 1643 213 12 0 0 0 2.2959E-247 5 67183 260.72 232.44 3 0.79412 1.0093 0 4072100000 2281000000 1791000000 6523 464 3334 3720 10722;10723;10724;10725;10726 10724 809;810;2739 VFDLQFSTDSPR 12 0 1 Phospho (STY) _VFDLQFSTDS(ph)PR_ VFDLQFS(0.015)T(0.115)DS(0.87)PR VFDLQFS(-17.57)T(-8.78)DS(8.78)PR 0 0 1 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 746.3299 2 746.329414 1490.64427 68579 0.71406 0.00053292 0.42891 0.00032011 1.143 0.00085303 746.329332624417 751.333531022792 145.27 0.15581 145.27 145.25 145.41 0 16 4 7 0 0 0 7.4984E-42 2 83656 160.48 142.42 3 0.82239 1.0114 0 26229000 13850000 12379000 6524 464 3334 3720 10727;10728 10727 809;810;2739 VFDLQFSTDSPR 12 0 1 Phospho (STY) _VFDLQFSTDS(ph)PR_ VFDLQFS(0.177)T(0.148)DS(0.675)PR VFDLQFS(-5.82)T(-6.59)DS(5.82)PR 0 0 1 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 746.3295 2 746.329414 1490.64427 NaN NaN NaN -0.57866 -0.00043187 NaN NaN NaN NaN 116.13 0.21134 116.13 116.05 116.26 0 0 0 0 5.093E-10 1 69363 99.941 81.805 3 NaN NaN 0 6591100 6591100 0 6525 464 3334 3720 10729 10729 809;810;2739 VFDLQFSTDSPR 12 0 1 Phospho (STY) _VFDLQFST(ph)DSPR_ VFDLQFS(0.38)T(0.404)DS(0.216)PR VFDLQFS(-0.27)T(0.27)DS(-2.72)PR 0 0 1 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 746.329 2 746.329414 1490.64427 NaN NaN NaN 0.2591 0.00019337 NaN NaN NaN NaN 133.12 0.56647 133.12 132.79 133.35 0 0 0 0 0.0046161 1 80948 70.889 42.124 3 NaN NaN 0 2564000 2564000 0 6526 464 3334 3720 10730 10730 809;810;2739 VFDLQFSTDSPR 12 0 1 Phospho (STY) _VFDLQFSTDS(ph)PR_ VFDLQFS(0.001)T(0.046)DS(0.953)PR VFDLQFS(-28.39)T(-13.17)DS(13.17)PR 0 0 1 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 751.3345 2 746.329414 1490.64427 NaN NaN NaN NaN NaN NaN NaN NaN NaN 114.49 1 114.49 113.99 114.99 -7.6294E-06 0 0 0 1.6414E-13 1 68192 134.04 110.37 3 6527 464 3334 3720 10731 10731 809;810;2739 VFDLQFSTDSPR 12 0 1 Phospho (STY) _VFDLQFST(ph)DSPR_ VFDLQFS(0.208)T(0.396)DS(0.396)PR VFDLQFS(-2.79)T(0)DS(0)PR 0 0 1 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 751.3356 2 746.329414 1490.64427 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.18 1 116.18 115.68 116.68 0 0 0 0 0.022219 1 69419 46.387 34.43 3 6528 464 3334 3720 10732 10732 809;810;2739 VFDLQFSTDSPR 12 0 1 Phospho (STY) _VFDLQFSTDS(ph)PR_ VFDLQFS(0.06)T(0.27)DS(0.67)PR VFDLQFS(-10.47)T(-3.94)DS(3.94)PR 0 0 1 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 746.3327 2 746.329414 1490.64427 NaN NaN NaN NaN NaN NaN NaN NaN NaN 116.89 1 116.89 116.39 117.39 0 0 0 0 0.0036434 1 69940 92.039 63.415 3 6529 464 3334 3720 10733 10733 809;810;2739 VFDLQFSTDSPR 12 0 1 Phospho (STY) _VFDLQFS(ph)TDSPR_ VFDLQFS(0.333)T(0.333)DS(0.333)PR VFDLQFS(0)T(0)DS(0)PR 0 0 1 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 751.3339 2 746.329414 1490.64427 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.55 1 118.55 118.05 119.05 0 0 0 0 0.0010823 1 71157 54.7 40.033 3 6530 464 3334 3720 10734 10734 809;810;2739 VFDLQFSTDSPR 12 0 1 Phospho (STY) _VFDLQFS(ph)TDSPR_ VFDLQFS(0.333)T(0.333)DS(0.333)PR VFDLQFS(0)T(0)DS(0)PR 0 0 1 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 751.3383 2 746.329414 1490.64427 NaN NaN NaN NaN NaN NaN NaN NaN NaN 118.6 1 118.6 118.1 119.1 0 0 0 0 0.016874 1 71200 40.377 29.548 3 6531 464 3334 3720 10735 10735 809;810;2739 VFDLQFSTDSPR 12 0 1 Phospho (STY) _VFDLQFSTDS(ph)PR_ VFDLQFS(0.145)T(0.145)DS(0.709)PR VFDLQFS(-6.89)T(-6.89)DS(6.89)PR 0 0 1 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 746.3293 2 746.329414 1490.64427 NaN NaN NaN NaN NaN NaN NaN NaN NaN 119.16 1 119.16 118.66 119.66 0 0 0 0 0.00024785 1 71594 63.091 50.531 3 6532 464 3334 3720 10736 10736 809;810;2739 VFDLQFSTDSPR 12 0 1 Phospho (STY) _VFDLQFS(ph)TDSPR_ VFDLQFS(0.381)T(0.381)DS(0.238)PR VFDLQFS(0)T(0)DS(-2.04)PR 0 0 1 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 746.3313 2 746.329414 1490.64427 NaN NaN NaN NaN NaN NaN NaN NaN NaN 120.21 1 120.21 119.71 120.71 0 0 0 0 9.6047E-05 1 72356 69.03 51.819 3 6533 464 3334 3720 10737 10737 809;810;2739 VFDLQFSTDSPR 12 0 1 Phospho (STY) _VFDLQFSTDS(ph)PR_ VFDLQFS(0.002)T(0.028)DS(0.97)PR VFDLQFS(-27)T(-15.33)DS(15.33)PR 0 0 1 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 746.3303 2 746.329414 1490.64427 69858.1 1.1607 0.0008663 0.08873 6.6222E-05 1.2495 0.00093252 746.330629203138 751.333705186352 119.18 5.732 119.18 118.45 124.18 7.6294E-06 2435 526 13 0 0 0 1.4103E-65 10 76560 178.67 161.53 3 1.5478 0.97333 0 2744500000 1081200000 1663300000 6534 464 3334 3720 10738;10739;10740;10741;10742;10743;10744;10745;10746;10747 10739 809;810;2739 VFDLQFSTDSPR 12 0 1 Phospho (STY) _VFDLQFS(ph)TDSPR_ VFDLQFS(0.462)T(0.317)DS(0.221)PR VFDLQFS(1.64)T(-1.64)DS(-3.2)PR 0 0 1 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 751.3342 2 746.329414 1490.64427 69767.41 1.0551 0.00078747 1.661 0.0012396 2.7161 0.0020271 746.32916286009 751.33354086561 124.39 1.419 124.39 123.93 125.35 -7.6294E-06 398 134 6 0 0 0 0.0077644 1 80617 56.951 50.418 3 1.5311 1.2477 0 6621600 2658700 3962900 6535 464 3334 3720 10748 10748 809;810;2739 VFDLQFSTDSPR 12 0 1 Phospho (STY) _VFDLQFSTDS(ph)PR_ VFDLQFS(0.208)T(0.208)DS(0.584)PR VFDLQFS(-4.48)T(-4.48)DS(4.48)PR 0 0 1 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 751.3343 2 746.329414 1490.64427 71288.55 1.0206 0.0007617 0.28448 0.00021232 1.3051 0.00097401 746.329333467288 751.333690004963 134.36 0.56177 134.36 134 134.56 0 143 43 6 0 0 0 0.0015351 1 86665 75.102 65.149 3 1.5407 1.2529 0 6768500 2350900 4417600 6536 464 3334 3720 10749 10749 809;810;2739 VFDLQFSTDSPR 12 0 1 Phospho (STY) _VFDLQFS(ph)TDSPR_ VFDLQFS(0.367)T(0.367)DS(0.267)PR VFDLQFS(0)T(0)DS(-1.38)PR 0 0 1 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 746.8325 2 746.329414 1490.64427 NaN NaN NaN 0.31915 0.00023819 NaN NaN NaN NaN 112.32 0.74181 112.32 111.97 112.71 0 0 0 0 0.0053328 1 72121 53.252 36.678 3 NaN NaN 0 6210100 6210100 0 6537 464 3334 3720 10750 10750 809;810;2739 VFDLQFSTDSPR 12 0 1 Phospho (STY) _VFDLQFST(ph)DSPR_ VFDLQFS(0.186)T(0.595)DS(0.219)PR VFDLQFS(-5.04)T(4.34)DS(-4.34)PR 0 0 1 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 751.3322 2 746.329414 1490.64427 NaN NaN NaN -1.2376 -0.00092364 NaN NaN NaN NaN 112.32 0.73351 112.32 112.08 112.82 7.6294E-06 0 0 0 0.0050644 1 72256 63.16 50.068 3 NaN NaN 0 8869300 0 8869300 6538 464 3334 3720 10751 10751 809;810;2739 VFDLQFSTDSPR 12 0 1 Phospho (STY) _VFDLQFS(ph)TDSPR_ VFDLQFS(0.373)T(0.373)DS(0.254)PR VFDLQFS(0)T(0)DS(-1.68)PR 0 0 1 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 751.3351 2 746.329414 1490.64427 NaN NaN NaN 0.57159 0.0004266 NaN NaN NaN NaN 129.54 0.33313 129.54 129.32 129.66 0 0 0 0 0.0023176 1 83654 62.891 50.124 3 NaN NaN 0 1923000 0 1923000 6539 464 3334 3720 10752 10752 809;810;2739 VFDLQFSTDSPR 12 0 1 Phospho (STY) _VFDLQFS(ph)TDSPR_ VFDLQFS(0.369)T(0.369)DS(0.262)PR VFDLQFS(0)T(0)DS(-1.49)PR 0 0 1 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 751.335 2 746.329414 1490.64427 NaN NaN NaN NaN NaN NaN NaN NaN NaN 125.5 1 125.5 125 126 -7.6294E-06 0 0 0 0.001271 1 81112 53.754 37.529 3 6540 464 3334 3720 10753 10753 809;810;2739 VFDLQFSTDSPR 12 0 1 2 Phospho (STY) _VFDLQFST(ph)DS(ph)PR_ VFDLQFS(0.185)T(0.86)DS(0.955)PR VFDLQFS(-7.66)T(7.66)DS(12.54)PR 0 0 2 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 786.6672 2 786.312579 1570.6106 70414.89 1.0062 0.00079119 -0.039322 -3.092E-05 0.96688 0.00076027 786.312508731789 791.316748625939 118.21 0.81496 118.21 117.79 118.6 0 317 71 6 0 0 0 0.0053778 1 70619 61.11 48.233 3 0.61253 0.74582 0 20897000 12648000 8248300 6541 464 3334 3721 10754 10754 809;810;2739 VFDLQFSTDSPR 12 0 1 2 Phospho (STY) _VFDLQFS(ph)T(ph)DSPR_ VFDLQFS(0.977)T(0.733)DS(0.289)PR VFDLQFS(14.99)T(4.26)DS(-4.26)PR 0 0 2 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 791.3175 2 786.312579 1570.6106 69095.55 0.84075 0.00066109 -0.031471 -2.4746E-05 0.80928 0.00063634 786.312692199396 791.316616894486 120.55 1.8164 120.55 119.92 121.74 0 1031 152 11 0 0 0 8.2174E-26 3 72823 145.6 133.36 3 0.65393 0.82817 0 549770000 329460000 220310000 6542 464 3334 3721 10755;10756;10757 10757 809;810;2739 VFDLQFSTDSPR 12 0 1 2 Phospho (STY) _VFDLQFS(ph)TDS(ph)PR_ VFDLQFS(0.622)T(0.446)DS(0.932)PR VFDLQFS(1.65)T(-1.65)DS(9.13)PR 0 0 2 0 A8K4T8;Q15003;C9J470;B4DRG7;E9PHA2;C9JZP1 A8K4T8 A8K4T8 NCAPH Condensin complex subunit 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 786.3134 2 786.312579 1570.6106 68769.18 1.0357 0.00081442 0.078436 6.1675E-05 1.1142 0.0008761 786.312728444465 791.316728617882 131.22 2.4356 131.22 130.64 133.08 0 1185 233 11 0 0 0 6.8272E-07 2 84880 99.991 91.606 3 1.4883 0.98562 0 209350000 86470000 122880000 6543 464 3334 3721 10758;10759 10759 809;810;2739 VFIDQNLSPGK 11 1 0 Phospho (STY) _VFIDQNLS(ph)PGK_ VFIDQNLS(1)PGK VFIDQNLS(211.96)PGK 0 0 1 0 F5H452;Q5JSB6;Q5JSB5;A0A024RDY4;Q14186 F5H452 F5H452 TFDP1 Transcription factor Dp-1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 653.3211 2 649.313035 1296.61152 75632.14 0.83798 0.00054411 -0.071759 -4.6594E-05 0.76622 0.00049751 649.312846552665 653.320109040702 88.949 1.0215 88.949 88.4 89.421 7.6294E-06 423 92 6 0 0 0 2.0198E-102 2 48683 211.96 197.09 1 0.97976 1.2262 0 62508000 28252000 34256000 6544 232 3335 3722 10760;10761 10761 360 VFIDQNLSPGK 11 1 0 Phospho (STY) _VFIDQNLS(ph)PGK_ VFIDQNLS(1)PGK VFIDQNLS(110.91)PGK 0 0 1 0 F5H452;Q5JSB6;Q5JSB5;A0A024RDY4;Q14186 F5H452 F5H452 TFDP1 Transcription factor Dp-1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 653.321 2 649.313035 1296.61152 75866.78 1.1276 0.00073214 0.12067 7.835E-05 1.2482 0.00081049 649.313241558701 653.320104472308 92.161 1.3829 92.161 91.52 92.903 0 624 136 7 0 0 0 1.0201E-08 3 59582 110.91 110.91 1 2.072 1.3634 0 57499000 21784000 35715000 6545 232 3335 3722 10762;10763;10764 10764 360 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 500.2968 2 495.292559 988.570566 86146.77 0.40445 0.00020032 0.053697 2.6596E-05 0.45815 0.00022692 495.292534043967 500.296566263245 109.67 1.8922 109.67 108.91 110.8 0 782 152 8 0 0 0 0.016484 3 64170 107.43 61.711 1 0.68419 0.86585 0 363280000 220300000 142980000 6546 528 3336 3723 10765;10766;10767 10765 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 495.2926 2 495.292559 988.570566 86398.45 0.362 0.0001793 -0.19083 -9.4516E-05 0.17117 8.4779E-05 495.292408766153 500.296445491749 145.27 0.067978 145.27 145.24 145.31 0 15 3 7 0 0 0 0.0014083 2 83667 124.37 76.631 1 0.58294 0.70923 0 20717000 12756000 7960700 6547 528 3336 3723 10768;10769 10768 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 495.2926 2 495.292559 988.570566 85180.9 0.62878 0.00031143 0.0085668 4.2431E-06 0.63735 0.00031567 495.29245018554 500.29661619234 106.47 2.2886 106.47 105.66 107.95 0 989 219 6 0 0 0 0.014647 5 68501 114.78 65.424 1 0.74887 0.50656 0 72987000 40100000 32887000 6548 528 3336 3723 10770;10771;10772;10773;10774 10772 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 495.2926 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.04 1 108.04 107.54 108.54 0 0 0 0 0.033756 1 69534 43.246 15.14 1 6549 528 3336 3723 10775 10775 VFLENVIR 8 0 1 Unmodified _VFLENVIR_ 0 0 0 0 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 B2R4R0 HIST1H4H;HIST1H4A Histone H4 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 500.2972 2 495.292559 988.570566 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108.26 1 108.26 107.76 108.76 0 0 0 0 0.02967 1 69672 44.447 19.524 1 6550 528 3336 3723 10776 10776 VFQQHYTNK 9 1 0 Unmodified _VFQQHYTNK_ 0 0 0 0 O43683;A8K5A6;B4DYG2 O43683 O43683 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 388.8646 3 388.864729 1163.57236 96823.72 -0.20761 -8.0731E-05 -0.22945 -8.9223E-05 -0.43705 -0.00016995 388.864698439447 391.535832269684 65.29 0.3158 65.29 65.122 65.438 -7.6294E-06 67 22 6 0 0 0 0.014282 1 31387 38.567 32.844 1 0.863 1.0802 0 26814000 12461000 14353000 6551 926 3337 3724 10777 10777 VFTQVSHLAR 10 0 1 2 Phospho (STY) _VFT(ph)QVS(ph)HLAR_ VFT(1)QVS(1)HLAR VFT(43.77)QVS(43.77)HLAR 0 0 2 0 G3XAE0;B3KUR0;Q5HY98 G3XAE0 G3XAE0 ZNF766 Zinc finger protein 766 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 664.2939 2 659.291253 1316.56795 75344.08 1.3323 0.00087837 -2.642 -0.0017419 -1.3097 -0.0008635 659.289362816359 664.293598662871 58.845 1.0622 58.845 58.305 59.367 0 441 97 6 0 0 0 0.014277 1 36155 43.77 27.677 1 1.8428 1.3675 0 22641000 7488700 15152000 6552 602 3338 3725 10778 10778 989;2780 VFTSWTGGGAAASR 14 0 1 Unmodified _VFTSWTGGGAAASR_ 0 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 684.3392 2 684.338758 1366.66296 NaN NaN NaN 0.10335 7.0728E-05 NaN NaN NaN NaN 81.919 2.4252 81.919 80.725 83.15 0 0 0 0 8.2188E-61 3 43679 150.06 106.81 1 NaN NaN 0 61993000 61993000 0 + 6553 756 3339 3726 10779;10780;10781 10780 VFTSWTGGGAAASR 14 0 1 Unmodified _VFTSWTGGGAAASR_ 0 0 0 0 CON__P15636 CON__P15636 CON__P15636 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 684.3392 2 684.338758 1366.66296 NaN NaN NaN 0.036164 2.4749E-05 NaN NaN NaN NaN 71.944 0.86779 71.944 71.587 72.455 -7.6294E-06 0 0 0 0.010302 1 45558 41.598 21.077 1 NaN NaN 0 3565000 3565000 0 + 6554 756 3339 3726 10782 10782 VGDGDLSAEEIPENEVSLR 19 0 1 Phospho (STY) _VGDGDLS(ph)AEEIPENEVSLR_ VGDGDLS(1)AEEIPENEVSLR VGDGDLS(141.95)AEEIPENEVS(-141.95)LR 0 0 1 0 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1055.4753 2 1054.97281 2107.93107 59016.49 0.66685 0.0007035 0.23651 0.00024951 0.90336 0.00095302 1055.47431079025 1060.47873675628 105.87 1.2649 105.87 105.11 106.37 -7.6294E-06 544 86 11 0 0 0 1.2866E-85 3 61683 170.11 147.91 2 0.88293 1.1165 0 239190000 117010000 122180000 6555 1060 3340 3727 10783;10784;10785 10784 1993 VGDGDLSAEEIPENEVSLR 19 0 1 Phospho (STY) _VGDGDLS(ph)AEEIPENEVSLR_ VGDGDLS(1)AEEIPENEVSLR VGDGDLS(50.75)AEEIPENEVS(-50.75)LR 0 0 1 0 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1054.9745 2 1054.97281 2107.93107 58011.13 0.86493 0.00091248 0.41983 0.00044291 1.2848 0.0013554 1054.97359594867 1059.97734468209 113.29 1.3509 113.29 112.67 114.02 0 866 125 13 0 0 0 2.0341E-05 2 73057 52.365 46.822 2 1.7091 1.1169 0 405570000 153220000 252350000 6556 1060 3340 3727 10786;10787 10787 1993 VGDGDLSAEEIPENEVSLRR 20 0 2 Phospho (STY) _VGDGDLS(ph)AEEIPENEVSLRR_ VGDGDLS(0.996)AEEIPENEVS(0.004)LRR VGDGDLS(24.35)AEEIPENEVS(-24.35)LRR 0 0 1 1 Q14684;Q6PJM8 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 755.6853 3 755.684671 2264.03218 68662.49 1.0101 0.0007633 -0.010674 -8.0665E-06 0.9994 0.00075523 756.019199062249 762.35689520387 98.018 1.5736 98.018 97.364 98.938 -7.6294E-06 929 144 12 0 0 0 3.8561E-05 1 63389 42.454 42.454 2 1.9425 1.6953 0 182430000 60666000 121760000 6557 1060 3341 3728 10788 10788 1993 VGDTEKPEPERSPPNR 16 1 2 Phospho (STY) _VGDTEKPEPERS(ph)PPNR_ VGDT(0.001)EKPEPERS(0.999)PPNR VGDT(-32.59)EKPEPERS(32.59)PPNR 0 0 1 2 Q9NZ63 Q9NZ63 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 630.2932 3 629.958066 1886.85237 76109.91 1.0108 0.00063678 -0.19606 -0.00012351 0.81477 0.00051327 629.957824437514 639.301522045324 17.615 0.37732 17.615 17.423 17.8 1.9073E-06 88 14 8 0 0 0 8.8001E-05 1 4770 48.315 40.983 2 1.6177 1.5369 0 20641000 7712000 12929000 6558 1225 3342 3729 10789 10789 2488 VGDTSLDPNDFDFTVTGR 18 0 1 Phospho (STY) _VGDT(ph)SLDPNDFDFTVTGR_ VGDT(0.5)S(0.5)LDPNDFDFTVTGR VGDT(0)S(0)LDPNDFDFT(-58.82)VT(-68.63)GR 0 0 1 0 I6LM39;D6QZ43;A0A087X1U4;C6KG44;E1B2J3;E9LUH3;D9ZNA4;D3YJ43;D0UU70;A8K079;A0A140VKC4;E9LUH4;P51608;A0A087WVW7;D5L9I5;A0A075BPP5 I6LM39 I6LM39 MECP2 Methyl-CpG-binding protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1018.939 2 1018.43587 2034.85718 59562.33 0.27303 0.00027807 1.1363 0.0011573 1.4094 0.0014353 1018.9377717926 1023.43976446664 120.67 1.1668 120.67 120.05 121.22 7.6294E-06 421 99 9 0 0 0 1.7588E-06 2 72588 72.496 62.331 4 0.31837 0.40115 0 57440000 45057000 12383000 6559 272 3343 3730 10790;10791 10790 434;2671 VGDVTPQVK 9 1 0 Phospho (STY) _VGDVT(ph)PQVK_ VGDVT(1)PQVK VGDVT(51.01)PQVK 0 0 1 0 J3KQ96;E7ETY2;Q13428 J3KQ96 J3KQ96 TCOF1 Treacle protein ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 515.7568 2 511.74954 1021.48453 NaN NaN NaN 0.42259 0.00021626 NaN NaN NaN NaN 39.381 0.50089 39.381 39.086 39.586 0 0 0 0 0.025379 1 22676 51.013 23 1 NaN NaN 0 3955400 0 3955400 6560 792 3344 3731 10792 10792 2823 VGGSDEEASGIPSR 14 0 1 Phospho (STY) _VGGS(ph)DEEASGIPSR_ VGGS(1)DEEASGIPSR VGGS(38.72)DEEAS(-38.72)GIPS(-54.71)R 0 0 1 0 A8MV53;A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;H7C446 A8MV53;H7C446 H7C446 PPAN;PPAN-P2RY11 Suppressor of SWI4 1 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 720.8044 2 720.80376 1439.59297 73125.32 0.8901 0.00064159 0.055964 4.0339E-05 0.94606 0.00068193 720.803749861318 725.807917278433 48.174 0.91728 48.174 47.612 48.529 3.8147E-06 173 61 6 0 0 0 0.0027017 1 18638 57.136 49.411 3 0.58134 0.63519 0 5567600 3088600 2479100 6561 303;884 3345 3732 10793 10793 485 VGGSDEEASGIPSR 14 0 1 Phospho (STY) _VGGS(ph)DEEASGIPSR_ VGGS(1)DEEASGIPSR VGGS(108.86)DEEAS(-108.86)GIPS(-161.12)R 0 0 1 0 A8MV53;A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;H7C446 A8MV53;H7C446 H7C446 PPAN;PPAN-P2RY11 Suppressor of SWI4 1 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 725.8083 2 720.80376 1439.59297 70983.76 0.64141 0.00046233 0.21102 0.0001521 0.85242 0.00061443 720.804359409307 725.807898516617 49.84 3.0163 49.84 48.467 51.484 0 1630 245 11 0 0 0 8.5224E-89 4 20051 186.05 161.08 3 0.68316 0.8663 0 1128300000 663960000 464380000 6562 303;884 3345 3732 10794;10795;10796;10797 10796 485 VGGSDEEASGIPSR 14 0 1 Phospho (STY) _VGGS(ph)DEEASGIPSR_ VGGS(0.999)DEEASGIPSR VGGS(33.09)DEEAS(-33.09)GIPS(-41.79)R 0 0 1 0 A8MV53;A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;H7C446 A8MV53;H7C446 H7C446 PPAN;PPAN-P2RY11 Suppressor of SWI4 1 homolog MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 725.8083 2 720.80376 1439.59297 NaN NaN NaN NaN NaN NaN NaN NaN NaN 47.816 1 47.816 47.316 48.316 0 0 0 0 0.0025773 1 18597 44.299 33.974 3 6563 303;884 3345 3732 10798 10798 485 VGGSDEEASGIPSR 14 0 1 Phospho (STY) _VGGS(ph)DEEASGIPSR_ VGGS(1)DEEASGIPSR VGGS(55.63)DEEAS(-55.63)GIPS(-73.88)R 0 0 1 0 A8MV53;A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;H7C446 A8MV53;H7C446 H7C446 PPAN;PPAN-P2RY11 Suppressor of SWI4 1 homolog MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 720.8047 2 720.80376 1439.59297 72854.8 0.89413 0.00064449 0.32952 0.00023752 1.2237 0.00088201 720.803916854084 725.808191280498 29.7 0.8301 29.7 29.403 30.233 0 311 57 8 0 0 0 7.6326E-08 1 15256 91.845 77.158 3 1.0632 0.72238 0 58569000 30045000 28524000 6564 303;884 3345 3732 10799 10799 485 VGGSDEEASGIPSR 14 0 1 Phospho (STY) _VGGS(ph)DEEASGIPSR_ VGGS(1)DEEASGIPSR VGGS(58.48)DEEAS(-58.48)GIPS(-101.15)R 0 0 1 0 A8MV53;A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;H7C446 A8MV53;H7C446 H7C446 PPAN;PPAN-P2RY11 Suppressor of SWI4 1 homolog MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 725.8091 2 720.80376 1439.59297 71376.4 0.99854 0.00071975 -0.43809 -0.00031578 0.56045 0.00040397 720.804608419896 725.807616032145 43.078 3.1089 43.078 42.441 45.55 0 1559 278 11 0 0 0 1.5029E-17 3 25145 113.43 94.856 3 1.0879 0.68335 0 2899000000 1385100000 1513800000 6565 303;884 3345 3732 10800;10801;10802 10800 485 VGMADANSPPKPLSK 15 2 0 Oxidation (M),Phospho (STY) _VGM(ox)ADANS(ph)PPKPLSK_ VGM(1)ADANSPPKPLSK VGMADANS(0.999)PPKPLS(0.001)K VGM(86)ADANSPPKPLSK VGMADANS(30.46)PPKPLS(-30.46)K 0 1 1 1 Q59FP7;A0A024R7E3;P26358;K7EJL0 Q59FP7 Q59FP7 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 804.3767 2 804.378581 1606.74261 66774.47 0.69768 0.0005612 -1.3276 -0.0010679 -0.62989 -0.00050667 804.378517305961 812.39182324231 55.075 1.5873 55.075 54.175 55.763 -3.8147E-06 658 124 9 0 0 0 3.0237E-06 3 23179 86.005 78.605 2 0.3457 0.43534 0 55051000 39948000 15103000 6566 133 3346 3733 10803;10804;10805 10803 28 200 VGMADANSPPKPLSK 15 2 0 Oxidation (M),Phospho (STY) _VGM(ox)ADANS(ph)PPKPLSK_ VGM(1)ADANSPPKPLSK VGMADANS(0.998)PPKPLS(0.002)K VGM(91.59)ADANSPPKPLSK VGMADANS(26.88)PPKPLS(-26.88)K 0 1 1 1 Q59FP7;A0A024R7E3;P26358;K7EJL0 Q59FP7 Q59FP7 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 536.5884 3 536.588146 1606.74261 82408.7 0.39617 0.00021258 0.10045 5.39E-05 0.49662 0.00026648 536.588348697423 541.931007407748 54.967 1.1586 54.967 54.429 55.588 0 406 90 9 0 0 0 1.1746E-08 1 23309 91.589 91.589 2 0.40911 0.51308 0 47551000 33072000 14479000 6567 133 3346 3733 10806 10806 28 200 VGMADANSPPKPLSK 15 2 0 Oxidation (M),Phospho (STY) _VGM(ox)ADANS(ph)PPKPLSK_ VGM(1)ADANSPPKPLSK VGMADANS(0.941)PPKPLS(0.059)K VGM(69.36)ADANSPPKPLSK VGMADANS(11.99)PPKPLS(-11.99)K 0 1 1 1 Q59FP7;A0A024R7E3;P26358;K7EJL0 Q59FP7 Q59FP7 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 542.2643 3 536.588146 1606.74261 81635.5 0.95915 0.00051467 -0.42485 -0.00022797 0.53429 0.0002867 536.588262955685 541.93035000722 34.079 1.1594 34.079 33.438 34.597 0 390 90 6 0 0 0 0.00016386 1 18681 69.361 59.196 2 0.76026 0.60277 0 32033000 17861000 14172000 6568 133 3346 3733 10807 10807 28 200 VGMADANSPPKPLSK 15 2 0 Oxidation (M),Phospho (STY) _VGM(ox)ADANS(ph)PPKPLSK_ VGM(1)ADANSPPKPLSK VGMADANS(0.929)PPKPLS(0.071)K VGM(42.26)ADANSPPKPLSK VGMADANS(11.17)PPKPLS(-11.17)K 0 1 1 1 Q59FP7;A0A024R7E3;P26358;K7EJL0 Q59FP7 Q59FP7 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 804.3803 2 804.378581 1606.74261 66790.01 1.1841 0.00095245 0.032219 2.5916E-05 1.2163 0.00097837 804.378792340138 812.392642820541 34.033 1.4487 34.033 33.285 34.734 -3.8147E-06 657 112 9 0 0 0 0.0032756 1 18861 42.257 36.016 2 0.74317 0.55786 0 77270000 45769000 31501000 6569 133 3346 3733 10808 10808 28 200 VGPATPSAQVGK 12 1 0 Unmodified _VGPATPSAQVGK_ 0 0 0 0 J3KQ96;E7ETY2;Q13428;B4DRA2;Q59FZ2 J3KQ96 J3KQ96 TCOF1 Treacle protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 560.316 2 556.308938 1110.60332 83518.71 0.71962 0.00040033 0.14757 8.2094E-05 0.86719 0.00048242 556.308692054601 560.316283377009 30.417 0.93137 30.417 29.754 30.685 0 221 67 6 0 0 0 0.024391 1 15868 59.067 52.618 1 1.9672 1.4541 0 8724700 3342500 5382200 6570 792 3347 3734 10809 10809 VGQQAIVLCISPSK 14 1 0 Phospho (STY) _VGQQAIVLCIS(ph)PSK_ VGQQAIVLCIS(0.889)PS(0.111)K VGQQAIVLCIS(9.04)PS(-9.04)K 0 0 1 0 C9JP85;A0A024R770;A0A024R774;Q16656 C9JP85 C9JP85 NRF1 Nuclear respiratory factor 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 790.4003 2 790.399316 1578.78408 NaN NaN NaN -0.1918 -0.00015159 NaN NaN NaN NaN 106.05 0.53578 106.05 105.85 106.39 0 0 0 0 1.3825E-07 1 61639 92.575 60.567 2 NaN NaN 0 4124500 4124500 0 6571 129 3348 3735 10810 10810 192 VGQQAIVLCISPSK 14 1 0 Phospho (STY) _VGQQAIVLCIS(ph)PSK_ VGQQAIVLCIS(0.776)PS(0.224)K VGQQAIVLCIS(5.4)PS(-5.4)K 0 0 1 0 C9JP85;A0A024R770;A0A024R774;Q16656 C9JP85 C9JP85 NRF1 Nuclear respiratory factor 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 794.4069 2 790.399316 1578.78408 NaN NaN NaN NaN NaN NaN NaN NaN NaN 106.02 1 106.02 105.52 106.52 0 0 0 0 0.0013841 1 61626 47.639 23.257 2 6572 129 3348 3735 10811 10811 192 VGSPATVTFQQNK 13 1 0 Phospho (STY) _VGS(ph)PATVTFQQNK_ VGS(1)PATVTFQQNK VGS(59.89)PAT(-59.89)VT(-120.27)FQQNK 0 0 1 0 E7ETD6;Q12830;F5GXF5;J3QQK4 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 728.8464 2 728.845231 1455.67591 71557.63 0.58125 0.00042364 0.32398 0.00023613 0.90523 0.00065977 728.845505760099 732.852498833339 68.384 1.3969 68.384 67.835 69.232 0 658 128 6 0 0 0 8.8235E-172 2 34096 239.48 239.48 3 0.70571 0.87419 0 149400000 79859000 69545000 6573 791 3349 3736 10812;10813 10813 1343 VGSPATVTFQQNK 13 1 0 Phospho (STY) _VGS(ph)PATVTFQQNK_ VGS(0.997)PAT(0.003)VTFQQNK VGS(25.38)PAT(-25.38)VT(-39.38)FQQNK 0 0 1 0 E7ETD6;Q12830;F5GXF5;J3QQK4 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 728.8459 2 728.845231 1455.67591 71532.62 1.1096 0.00080871 -0.091362 -6.6589E-05 1.0182 0.00074212 728.845303347358 732.852292853538 66.71 1.717 66.71 65.959 67.676 0 1035 156 10 0 0 0 0.0047989 2 41898 58.116 58.116 3 1.9438 1.2985 0 228400000 73794000 154600000 6574 791 3349 3736 10814;10815 10815 1343 VGSPLDYSLVDLPSTNGQSPGK 22 1 0 2 Phospho (STY) _VGS(ph)PLDYSLVDLPST(ph)NGQSPGK_ VGS(0.948)PLDY(0.036)S(0.016)LVDLPS(0.147)T(0.575)NGQS(0.277)PGK VGS(14.94)PLDY(-14.94)S(-17.86)LVDLPS(-5.91)T(3.27)NGQS(-3.27)PGK 0 0 2 0 Q96T23 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1196.5319 2 1196.02948 2390.0444 NaN NaN NaN -0.24178 -0.00028917 NaN NaN NaN NaN 130.93 1.0296 130.93 130.52 131.55 0 0 0 0 1.5614E-10 1 79484 60.032 44.551 15 NaN NaN 0 116800000 116800000 0 6575 1188 3350 3737 10816 10816 2350;2977 VGSPLDYSLVDLPSTNGQSPGK 22 1 0 Phospho (STY) _VGS(ph)PLDYSLVDLPSTNGQSPGK_ VGS(0.668)PLDY(0.156)S(0.175)LVDLPSTNGQSPGK VGS(5.81)PLDY(-6.31)S(-5.81)LVDLPS(-33.34)T(-33.34)NGQS(-33.71)PGK 0 0 1 0 Q96T23 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1160.0569 2 1156.04631 2310.07807 NaN NaN NaN NaN NaN NaN NaN NaN NaN 122.15 1 122.15 121.65 122.65 -7.6294E-06 0 0 0 0.00054821 1 73829 44.816 32.049 6 6576 1188 3350 3738 10817 10817 2350;2977 VGTEGLVDSFSQGLER 16 0 1 Phospho (STY) _VGTEGLVDS(ph)FSQGLER_ VGTEGLVDS(0.794)FS(0.205)QGLER VGT(-35.69)EGLVDS(5.88)FS(-5.88)QGLER 0 0 1 0 A0A024R4W0;T1ECW5;O75170 A0A024R4W0 A0A024R4W0 SAPS2;PPP6R2 Serine/threonine-protein phosphatase 6 regulatory subunit 2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 887.405 2 887.406381 1772.79821 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.24 1 110.24 109.74 110.74 -7.6294E-06 0 0 0 0.001584 1 65031 44.252 28.622 3 6577 96 3351 3739 10818 10818 129 VGVFEEIVPMGISPK 15 1 0 Oxidation (M),Phospho (STY) _VGVFEEIVPM(ox)GIS(ph)PK_ VGVFEEIVPM(1)GISPK VGVFEEIVPMGIS(1)PK VGVFEEIVPM(47.55)GISPK VGVFEEIVPMGIS(47.55)PK 0 1 1 0 B3KVC7;A0A0S2Z5Z0;Q5T7W7 B3KVC7 B3KVC7 TSTD2 Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 853.4207 2 849.414632 1696.81471 NaN NaN NaN NaN NaN NaN NaN NaN NaN 125.32 1 125.32 124.82 125.82 -7.6294E-06 0 0 0 0.0010823 1 75942 47.545 16.36 1 6578 364 3352 3740 10819 10819 86 572 VHELNEEIGK 10 1 0 Unmodified _VHELNEEIGK_ 0 0 0 0 B8ZZ09;B8ZZ10;A8MYV2;D3DU41;Q1W6G4;B3KRR1;Q53G47;B3KSL5;A0A0A6YYJ8;Q9NQ29;Q9Y383 B8ZZ09 B8ZZ09 LUC7L;LUC7L2 Putative RNA-binding protein Luc7-like 1;Putative RNA-binding protein Luc7-like 2 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 584.3047 2 584.303852 1166.59315 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.637 1 79.637 79.137 80.137 0 0 0 0 0.0082006 1 42018 55.084 30.565 1 6579 304 3353 3741 10820 10820 VHELQGNAPSDPDAVSAEEALK 22 1 0 Phospho (STY) _VHELQGNAPS(ph)DPDAVSAEEALK_ VHELQGNAPS(0.999)DPDAVS(0.001)AEEALK VHELQGNAPS(29.96)DPDAVS(-29.96)AEEALK 0 0 1 0 B3KNB2;Q68DI5;F5H2T0;B3KXE7;B4E3I9;Q8N516;Q4LE38;O95163 B3KNB2 B3KNB2 DKFZp781H1425;IKBKAP;IKBKAP variant protein Elongator complex protein 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 786.6965 3 786.360076 2356.0584 NaN NaN NaN 0.69509 0.00054659 NaN NaN NaN NaN 91.232 0.15548 91.232 91.157 91.312 -7.6294E-06 0 0 0 9.9026E-05 1 50362 46.578 37.977 2 NaN NaN 0 5767700 5767700 0 6580 579 3354 3742 10821 10821 962 VHELQGNAPSDPDAVSAEEALK 22 1 0 Phospho (STY) _VHELQGNAPS(ph)DPDAVSAEEALK_ VHELQGNAPS(0.987)DPDAVS(0.013)AEEALK VHELQGNAPS(18.72)DPDAVS(-18.72)AEEALK 0 0 1 0 B3KNB2;Q68DI5;F5H2T0;B3KXE7;B4E3I9;Q8N516;Q4LE38;O95163 B3KNB2 B3KNB2 DKFZp781H1425;IKBKAP;IKBKAP variant protein Elongator complex protein 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 786.6945 3 786.360076 2356.0584 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.398 1 91.398 90.898 91.898 0 0 0 0 0.00052935 1 50480 44.341 35.518 2 6581 579 3354 3742 10822 10822 962 VHFEESSK 8 1 0 Unmodified _VHFEESSK_ 0 0 0 0 B4DE32;B1AHC9;B2RDN9;A0A024R1N4;P12956;B4E356 B4DE32 B4DE32 XRCC6 X-ray repair cross-complementing protein 6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 481.7322 2 481.732532 961.45051 87745.52 0.085718 4.1293E-05 0.064875 3.1252E-05 0.15059 7.2545E-05 481.732426865405 485.739644026813 68.817 0.78719 68.817 68.567 69.355 0 278 76 7 0 0 0 0.017878 2 34101 89.752 74.97 1 0.39501 0.48931 0 150870000 103370000 47502000 6582 50 3355 3743 10823;10824 10823 VHGEPTSDLSDID 13 0 0 Phospho (STY) _VHGEPTSDLS(ph)DID_ VHGEPTSDLS(1)DID VHGEPT(-63.22)S(-51.56)DLS(51.56)DID 0 0 1 0 Q86X06;A0A024R4V5;Q9Y4Q3;B7Z926;A0A024R4W4;O95696;B4DZ41;B4DZC2;Q659H0;Q5CZ83 Q86X06 Q86X06 BRD1;DKFZp434B094;DKFZp586E1619;DKFZp686F0325 Bromodomain-containing protein 1 ISO-MSMS -1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 732.7981 2 732.798143 1463.58173 NaN NaN NaN -0.20152 -0.00014767 NaN NaN NaN NaN 81.995 1.7043 81.995 81.579 83.283 7.6294E-06 0 0 0 4.6872E-34 2 44130 132.56 117.69 3 6583 94 3356 3744 10825;10826 10826 126;127;2632 VHGEPTSDLSDID 13 0 0 Phospho (STY) _VHGEPT(ph)SDLSDID_ VHGEPT(0.852)S(0.148)DLSDID VHGEPT(7.61)S(-7.61)DLS(-35.56)DID 0 0 1 0 Q86X06;A0A024R4V5;Q9Y4Q3;B7Z926;A0A024R4W4;O95696;B4DZ41;B4DZC2;Q659H0;Q5CZ83 Q86X06 Q86X06 BRD1;DKFZp434B094;DKFZp586E1619;DKFZp686F0325 Bromodomain-containing protein 1 ISO-MSMS -1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 732.799 2 732.798143 1463.58173 NaN NaN NaN -0.051354 -3.7632E-05 NaN NaN NaN NaN 83.712 1.1155 83.712 83.162 84.278 0 0 0 0 0.0025323 1 44710 71.085 56.905 3 6584 94 3356 3744 10827 10827 126;127;2632 VHGEPTSDLSDID 13 0 0 Phospho (STY) _VHGEPTSDLS(ph)DID_ VHGEPTSDLS(1)DID VHGEPT(-55.94)S(-44.85)DLS(44.85)DID 0 0 1 0 Q86X06;A0A024R4V5;Q9Y4Q3;B7Z926;A0A024R4W4;O95696;B4DZ41;B4DZC2;Q659H0;Q5CZ83 Q86X06 Q86X06 BRD1;DKFZp434B094;DKFZp586E1619;DKFZp686F0325 Bromodomain-containing protein 1 ISO-MSMS -1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 732.7988 2 732.798143 1463.58173 NaN NaN NaN 0.17097 0.00012529 NaN NaN NaN NaN 81.655 1.3309 81.655 81.221 82.551 0 0 0 0 6.0342E-16 2 52583 105.36 90.692 3 6585 94 3356 3744 10828;10829 10829 126;127;2632 VHGEPTSDLSDID 13 0 0 2 Phospho (STY) _VHGEPTS(ph)DLS(ph)DID_ VHGEPT(0.051)S(0.949)DLS(1)DID VHGEPT(-12.66)S(12.66)DLS(86.71)DID 0 0 2 0 Q86X06;A0A024R4V5;Q9Y4Q3;B7Z926;A0A024R4W4;O95696;B4DZ41;B4DZC2;Q659H0;Q5CZ83 Q86X06 Q86X06 BRD1;DKFZp434B094;DKFZp586E1619;DKFZp686F0325 Bromodomain-containing protein 1 ISO-MSMS -1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 772.7817 2 772.781309 1543.54806 NaN NaN NaN 0.03646 2.8175E-05 NaN NaN NaN NaN 86.76 1.731 86.76 86.062 87.793 -7.6294E-06 0 0 0 1.5662E-57 2 47299 145.23 123.47 3 6586 94 3356 3745 10830;10831 10831 126;127;2632 VHGPGIQSGTTNKPNK 16 2 0 Unmodified _VHGPGIQSGTTNKPNK_ 0 0 0 1 Q5HY54;Q60FE6;Q60FE5;P21333;A6NDY9;A0A087WWY3;Q8TES4 Q5HY54 Q5HY54 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 413.7282 4 409.470681 1633.85362 93841.8 -0.15909 -6.5144E-05 -0.11264 -4.6124E-05 -0.27174 -0.00011127 409.470707714295 413.4777275938 73.223 0.89758 73.223 72.749 73.647 0 303 78 6 0 0 0 8.6194E-05 1 37152 43.548 38.174 1 1.4021 1.7708 0 61046000 23689000 37357000 6587 973 3357 3746 10832 10832 VHGPGIQSGTTNKPNK 16 2 0 Unmodified _VHGPGIQSGTTNKPNK_ 0 0 0 1 Q5HY54;Q60FE6;Q60FE5;P21333;A6NDY9;A0A087WWY3;Q8TES4 Q5HY54 Q5HY54 FLNA;FLJ00119 Filamin-A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 551.3032 3 545.625149 1633.85362 81991.52 0.71072 0.00038778 0.023337 1.2733E-05 0.73405 0.00040052 545.625225083788 550.968017147687 16.26 0.18219 16.26 16.149 16.332 0 18 5 5 0 0 0 6.0758E-06 2 3655 55.755 51.402 1 4.6599 4.1956 0 2297700 320630 1977100 6588 973 3357 3746 10833;10834 10833 VHIDIGADGR 10 0 1 Unmodified _VHIDIGADGR_ 0 0 0 0 A0A024QZP1;B4DHY1;Q53F48;A0A024QZK8;P31942 A0A024QZP1 A0A024QZP1 HNRPH3;HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 531.7827 2 526.777805 1051.54106 NaN NaN NaN 0.19631 0.00010341 NaN NaN NaN NaN 93.99 0.89012 93.99 93.651 94.541 0 0 0 0 0.0064917 1 52578 65.305 39.568 1 NaN NaN 0 31764000 0 31764000 6589 17 3358 3747 10835 10835 VHIDIGADGR 10 0 1 Unmodified _VHIDIGADGR_ 0 0 0 0 A0A024QZP1;B4DHY1;Q53F48;A0A024QZK8;P31942 A0A024QZP1 A0A024QZP1 HNRPH3;HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 354.8572 3 351.520962 1051.54106 NaN NaN NaN NaN NaN NaN NaN NaN NaN 94.131 1 94.131 93.631 94.631 0 0 0 0 0.026499 1 52630 50.292 26.864 1 6590 17 3358 3747 10836 10836 VHIEFTEGEDK 11 1 0 Unmodified _VHIEFTEGEDK_ 0 0 0 0 H7C0A4;B4DKR8;Q6ZS03;Q96CF6;H0Y394;B2R5V9;A0A024R4E5;Q00341 H7C0A4 H7C0A4 HDLBP Vigilin MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 652.3123 2 652.311874 1302.6092 NaN NaN NaN NaN NaN NaN NaN NaN NaN 97.184 1 97.184 96.684 97.684 0 0 0 0 0.0058659 1 54959 53.756 20.916 1 6591 88 3359 3748 10837 10837 VHIEIGPDGR 10 0 1 Unmodified _VHIEIGPDGR_ 0 0 0 0 B4DKS8;A0A024R7T3;P52597;B4DP51;H0YBG7;Q68DG4;H0YBD7;B4DP00;G8JLB6;P31943;E9PCY7;H0YB39;P55795;B4DFK9 B4DKS8;G8JLB6 G8JLB6 HNRPF;HNRNPF;HNRNPH1;DKFZp686A15170;HNRNPH2 Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 368.5307 3 364.864729 1091.57236 98619.76 0.26 9.4867E-05 -1.7631 -0.00064331 -1.5031 -0.00054844 364.864827169753 368.200833967044 97.609 0.45461 97.609 97.319 97.773 0 109 37 5 0 0 0 0.022374 2 55272 29.767 25.072 1 1.4227 1.7501 0 25025000 11447000 13578000 6592 844;140 3360 3749 10838;10839 10839 VHIEIGPDGR 10 0 1 Unmodified _VHIEIGPDGR_ 0 0 0 0 B4DKS8;A0A024R7T3;P52597;B4DP51;H0YBG7;Q68DG4;H0YBD7;B4DP00;G8JLB6;P31943;E9PCY7;H0YB39;P55795;B4DFK9 B4DKS8;G8JLB6 G8JLB6 HNRPF;HNRNPF;HNRNPH1;DKFZp686A15170;HNRNPH2 Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 546.7943 2 546.793455 1091.57236 81576.41 0.67831 0.0003709 0.39718 0.00021718 1.0755 0.00058807 546.793603780742 551.797612439589 98.079 1.4514 98.079 97.243 98.694 0 419 121 6 0 0 0 4.7403E-07 3 55633 124.92 111.2 1 1.4003 1.7676 0 86144000 38333000 47811000 6593 844;140 3360 3749 10840;10841;10842 10841 VHIEIGPDGR 10 0 1 Unmodified _VHIEIGPDGR_ 0 0 0 0 B4DKS8;A0A024R7T3;P52597;B4DP51;H0YBG7;Q68DG4;H0YBD7;B4DP00;G8JLB6;P31943;E9PCY7;H0YB39;P55795;B4DFK9 B4DKS8;G8JLB6 G8JLB6 HNRPF;HNRNPF;HNRNPH1;DKFZp686A15170;HNRNPH2 Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 551.799 2 546.793455 1091.57236 NaN NaN NaN 0.39949 0.00021844 NaN NaN NaN NaN 97.192 0.23217 97.192 97.011 97.243 0 0 0 0 0.00036383 1 54909 78.334 54.18 1 NaN NaN 0 8247000 0 8247000 6594 844;140 3360 3749 10843 10843 VHIEIGPDGR 10 0 1 Unmodified _VHIEIGPDGR_ 0 0 0 0 B4DKS8;A0A024R7T3;P52597;B4DP51;H0YBG7;Q68DG4;H0YBD7;B4DP00;G8JLB6;P31943;E9PCY7;H0YB39;P55795;B4DFK9 B4DKS8;G8JLB6 G8JLB6 HNRPF;HNRNPF;HNRNPH1;DKFZp686A15170;HNRNPH2 Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 364.8654 3 364.864729 1091.57236 NaN NaN NaN 0.52943 0.00019317 NaN NaN NaN NaN 98.074 0.93341 98.074 97.761 98.694 0 0 0 0 0.0066187 1 55641 67.881 50.485 1 NaN NaN 0 26122000 26122000 0 6595 844;140 3360 3749 10844 10844 VHIEIGPDGR 10 0 1 Unmodified _VHIEIGPDGR_ 0 0 0 0 B4DKS8;A0A024R7T3;P52597;B4DP51;H0YBG7;Q68DG4;H0YBD7;B4DP00;G8JLB6;P31943;E9PCY7;H0YB39;P55795;B4DFK9 B4DKS8;G8JLB6 G8JLB6 HNRPF;HNRNPF;HNRNPH1;DKFZp686A15170;HNRNPH2 Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 551.9313 2 546.793455 1091.57236 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.971 1 96.971 96.471 97.471 0 0 0 0 0.0036573 1 54795 66.621 42.466 1 6596 844;140 3360 3749 10845 10845 VHIPNDDAQFDASHCDSDK 19 1 0 Unmodified _VHIPNDDAQFDASHCDSDK_ 0 0 0 0 E9PC52;Q6FHQ0;Q16576;A8K6A2;Q5JP01;C9J7L0 E9PC52 E9PC52 RBBP7 Histone-binding protein RBBP7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 724.6423 3 724.307996 2169.90216 71497.62 1.2639 0.00091549 0.010155 7.3556E-06 1.2741 0.00092284 724.642422125297 727.313879088815 96.918 1.176 96.918 96.306 97.482 -7.6294E-06 601 97 9 0 0 0 3.9722E-07 3 55089 56.9 47.854 1 1.0045 1.2483 0 91535000 48527000 43008000 6597 798 3361 3750 10846;10847;10848 10848 VHIPNDDAQFDASHCDSDK 19 1 0 Unmodified _VHIPNDDAQFDASHCDSDK_ 0 0 0 0 E9PC52;Q6FHQ0;Q16576;A8K6A2;Q5JP01;C9J7L0 E9PC52 E9PC52 RBBP7 Histone-binding protein RBBP7 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 543.4825 4 543.482816 2169.90216 82103.12 1.047 0.00056905 -0.19108 -0.00010385 0.85596 0.0004652 543.482339220198 545.737114050452 96.929 0.85812 96.929 96.461 97.319 0 219 70 5 0 0 0 0.028091 1 54629 23.293 23.293 1 1.0369 1.2982 0 61643000 25311000 36332000 6598 798 3361 3750 10849 10849 VHSFTHEAPNQR 12 0 1 Unmodified _VHSFTHEAPNQR_ 0 0 0 0 Q6PKC6;B3KRR8;Q6AZD6;Q9H9M3;E9PBK6;B4DLP3;Q8NDH0;E9PDU5;B4E256;A0A087X295;Q9NNW5 Q6PKC6 Q6PKC6 WDR6;DKFZp434F1720 WD repeat-containing protein 6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 474.9015 3 474.900613 1421.68001 88429.91 0.35051 0.00016646 -0.52495 -0.0002493 -0.17444 -8.2842E-05 474.900505926158 478.236075204074 82.618 0.48808 82.618 82.295 82.783 0 166 47 5 0 0 0 7.1019E-05 1 44097 74.46 65.011 1 0.67178 0.8451 0 45988000 25419000 20569000 6599 275 3362 3751 10850 10850 VHVPARPYR 9 0 2 Unmodified _VHVPARPYR_ 0 0 0 1 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 365.545 3 365.545442 1093.6145 96393.95 0.47305 0.00017292 -0.028825 -1.0537E-05 0.44422 0.00016238 365.545273980042 372.217598324666 102.75 1.9381 102.75 101.85 103.79 7.6294E-06 434 145 5 0 0 0 0.013239 1 58901 64.265 55.306 1 1.7061 2.1163 0 42722000 14814000 27908000 6600 994;1130 3363 3752 10851 10851 VHVPARPYR 9 0 2 Unmodified _VHVPARPYR_ 0 0 0 1 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 372.2175 3 365.545442 1093.6145 NaN NaN NaN NaN NaN NaN NaN NaN NaN 103.98 1 103.98 103.48 104.48 0 0 0 0 0.014374 1 60130 40.352 20.048 1 6601 994;1130 3363 3752 10852 10852 VHVPARPYR 9 0 2 Unmodified _VHVPARPYR_ 0 0 0 1 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 372.2173 3 365.545442 1093.6145 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.74 1 104.74 104.24 105.24 0 0 0 0 0.011498 1 60677 42.599 24.159 1 6602 994;1130 3363 3752 10853 10853 VHVPARPYR 9 0 2 Unmodified _VHVPARPYR_ 0 0 0 1 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 372.2177 3 365.545442 1093.6145 NaN NaN NaN NaN NaN NaN NaN NaN NaN 105.5 1 105.5 105 106 0 0 0 0 0.012971 1 61216 41.448 24.777 1 6603 994;1130 3363 3752 10854 10854 VHVPARPYR 9 0 2 Unmodified _VHVPARPYR_ 0 0 0 1 P46013;Q70L73 P46013;Q70L73 P46013 MKI67 Antigen KI-67 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 372.2178 3 365.545442 1093.6145 NaN NaN NaN NaN NaN NaN NaN NaN NaN 106.49 1 106.49 105.99 106.99 7.6294E-06 0 0 0 0.029333 1 61998 31.76 17.553 1 6604 994;1130 3363 3752 10855 10855 VHVQFFDDSPTR 12 0 1 Phospho (STY) _VHVQFFDDS(ph)PTR_ VHVQFFDDS(0.726)PT(0.274)R VHVQFFDDS(4.24)PT(-4.24)R 0 0 1 0 A0A087WWJ1;Q1L838;P52701;C9J7Y7;Q3SWU9;U3KQ72;C9JH55;C9J8Y8;F8WAX8 A0A087WWJ1 A0A087WWJ1 MSH6;GTBP DNA mismatch repair protein Msh6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 769.3386 2 764.33503 1526.65551 69262.14 1.0632 0.00081262 -0.18708 -0.00014299 0.87609 0.00066963 764.334665849156 769.339060167025 105.13 1.218 105.13 104.58 105.8 0 473 82 8 0 0 0 3.7371E-79 4 61190 186.56 166.1 2 0.7638 0.9638 0 70875000 40683000 30192000 6605 259 3364 3753 10856;10857;10858;10859 10858 417 VHVQFFDDSPTR 12 0 1 Phospho (STY) _VHVQFFDDS(ph)PTR_ VHVQFFDDS(0.752)PT(0.248)R VHVQFFDDS(4.81)PT(-4.81)R 0 0 1 0 A0A087WWJ1;Q1L838;P52701;C9J7Y7;Q3SWU9;U3KQ72;C9JH55;C9J8Y8;F8WAX8 A0A087WWJ1 A0A087WWJ1 MSH6;GTBP DNA mismatch repair protein Msh6 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 513.2288 3 509.892446 1526.65551 89188.56 0.51422 0.0002622 -0.030237 -1.5418E-05 0.48399 0.00024678 509.892395781254 513.22849398066 96.073 0.3688 96.073 95.834 96.203 0 116 34 5 0 0 0 0.0071255 1 61743 41.743 36.759 2 0.73849 0.59611 0 7543700 4754800 2788900 6606 259 3364 3753 10860 10860 417 VHVQFFDDSPTR 12 0 1 Phospho (STY) _VHVQFFDDS(ph)PTR_ VHVQFFDDS(0.929)PT(0.071)R VHVQFFDDS(11.17)PT(-11.17)R 0 0 1 0 A0A087WWJ1;Q1L838;P52701;C9J7Y7;Q3SWU9;U3KQ72;C9JH55;C9J8Y8;F8WAX8 A0A087WWJ1 A0A087WWJ1 MSH6;GTBP DNA mismatch repair protein Msh6 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 764.3359 2 764.33503 1526.65551 NaN NaN NaN 0.37507 0.00028668 NaN NaN NaN NaN 96.027 1.1223 96.027 95.77 96.892 0 0 0 0 9.6173E-24 1 61705 121.42 94.877 2 NaN NaN 0 34469000 34469000 0 6607 259 3364 3753 10861 10861 417 VIDRFDEGEDGEGDFLVVGSIR 22 0 2 Phospho (STY) _VIDRFDEGEDGEGDFLVVGS(ph)IR_ VIDRFDEGEDGEGDFLVVGS(1)IR VIDRFDEGEDGEGDFLVVGS(75.1)IR 0 0 1 1 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 842.3893 3 835.382881 2503.12681 67852.47 0.57838 0.00048317 0.01285 1.0735E-05 0.59123 0.0004939 835.716945256794 842.389127861947 133.18 0.16574 133.18 133.09 133.26 -1.5259E-05 53 13 5 0 0 0 4.1086E-15 1 81017 75.103 70.226 1 0.57686 0.67994 0 10697000 6985500 3711900 6608 1223 3365 3754 10862 10862 2485 VIEASDVVLEVLDAR 15 0 1 Unmodified _VIEASDVVLEVLDAR_ 0 0 0 0 A0A024R2Z6;Q9BVP2 A0A024R2Z6 A0A024R2Z6 GNL3 Guanine nucleotide-binding protein-like 3 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 814.4479 2 814.448702 1626.88285 NaN NaN NaN NaN NaN NaN NaN NaN NaN 133.62 1 133.62 133.12 134.12 0 0 0 0 0.00029425 1 81423 54.471 27.957 1 6609 69 3366 3755 10863 10863 VIHELANER 9 0 1 Unmodified _VIHELANER_ 0 0 0 0 Q71UH4;Q02880;B4DKD0;E9PCY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 364.2007 3 360.864729 1079.57236 100758.8 0.024103 8.698E-06 -0.13396 -4.8342E-05 -0.10986 -3.9644E-05 360.864624621178 364.200730613192 75.877 0.46665 75.877 75.648 76.114 7.6294E-06 144 41 5 0 0 0 0.0089408 1 39085 44.863 17.534 1 0.51297 0.63161 0 31694000 18889000 12804000 6610 1032 3367 3756 10864 10864 VIHEQVNHR 9 0 1 Unmodified _VIHEQVNHR_ 0 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 377.8719 3 377.872106 1130.59449 95251.63 -0.13716 -5.183E-05 0.048519 1.8334E-05 -0.088643 -3.3496E-05 377.872132105203 381.208179159984 68.935 4.2867 68.935 68.633 72.92 0 1444 400 9 0 0 0 3.2159E-21 7 35122 138.1 122.51 1 0.71192 0.90255 0 983780000 571710000 412060000 6611 962 3368 3757 10865;10866;10867;10868;10869;10870;10871 10869 VIHEQVNHR 9 0 1 Unmodified _VIHEQVNHR_ 0 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 566.7672 2 566.304521 1130.59449 82284.43 0.34607 0.00019598 0.27119 0.00015358 0.61727 0.00034956 566.304503793439 571.308928027474 68.917 0.76231 68.917 68.721 69.483 0 234 73 5 0 0 0 0.00036584 1 34192 114.5 114.5 1 0.6359 0.80089 0 54041000 34119000 19923000 6612 962 3368 3757 10872 10872 VIKDEALSDGDDLRDFPSDLK 21 2 1 Phospho (STY) _VIKDEALS(ph)DGDDLRDFPSDLK_ VIKDEALS(0.997)DGDDLRDFPS(0.003)DLK VIKDEALS(25.27)DGDDLRDFPS(-25.27)DLK 0 0 1 2 X5DRB1;A8K146;A0A024R2M8;Q01831;D9I4E1;D2CPK1;E7EUB5;D2CPI9;D2CPJ0;D2CPJ8 X5DRB1 X5DRB1 XPC DNA repair protein complementing XP-C cells MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 818.7272 3 810.047498 2427.12067 67244.79 1.2433 0.0010071 -0.098571 -7.9847E-05 1.1447 0.0009273 810.382033198441 818.726185781074 107.82 1.6723 107.82 107.27 108.94 0 1051 162 9 0 0 0 3.7494E-13 1 69658 69.981 47.858 2 0.65296 0.53377 0 88297000 55563000 32733000 6613 66 3369 3758 10873 10873 84 VILASPETSSAK 12 1 0 Phospho (STY) _VILAS(ph)PETSSAK_ VILAS(0.943)PET(0.015)S(0.021)S(0.021)AK VILAS(16.54)PET(-17.99)S(-16.54)S(-16.54)AK 0 0 1 0 C9JKS0;F2YGU2;P49116;Q6PHZ7 C9JKS0 C9JKS0 NR2C2 Nuclear receptor subfamily 2 group C member 2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 641.8187 2 641.818151 1281.62175 NaN NaN NaN -0.80922 -0.00051938 NaN NaN NaN NaN 66.691 0.49431 66.691 66.47 66.964 0 0 0 0 0.0020743 1 32541 71.241 40.986 4 NaN NaN 0 8162900 8162900 0 6614 742 3370 3759 10874 10874 1254 VILASPETSSAK 12 1 0 Phospho (STY) _VILAS(ph)PETSSAK_ VILAS(0.607)PET(0.131)S(0.131)S(0.131)AK VILAS(6.65)PET(-6.65)S(-6.65)S(-6.65)AK 0 0 1 0 C9JKS0;F2YGU2;P49116;Q6PHZ7 C9JKS0 C9JKS0 NR2C2 Nuclear receptor subfamily 2 group C member 2 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 646.3269 2 641.818151 1281.62175 NaN NaN NaN 0.30583 0.00019628 NaN NaN NaN NaN 61.844 1.1954 61.844 61.333 62.528 0 0 0 0 0.016132 2 38088 41.401 11.867 4 NaN NaN 0 8063700 0 8063700 6615 742 3370 3759 10875;10876 10875 1254 VIQENEHALQK 11 1 0 Unmodified _VIQENEHALQK_ 0 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 439.5729 3 436.901731 1307.68336 90463.48 0.07888 3.4463E-05 0.13533 5.9127E-05 0.21421 9.359E-05 436.901784947254 439.573144724965 63.844 0.26954 63.844 63.742 64.012 0 110 19 8 0 0 0 0.00023266 2 30158 84.658 66.522 1 0.87921 1.0878 0 261470000 143230000 118240000 6616 1220 3371 3760 10877;10878 10878 VIQENEHALQK 11 1 0 Unmodified _VIQENEHALQK_ 0 0 0 0 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 439.5732 3 436.901731 1307.68336 94436.02 -0.14814 -6.4723E-05 0.52851 0.00023091 0.38037 0.00016618 436.901748602998 439.573425611164 21.133 0.25032 21.133 21.011 21.261 1.9073E-06 46 11 7 0 0 0 0.022774 1 7913 28.708 14.451 1 1.7177 1.4418 0 5015900 2041500 2974400 6617 1220 3371 3760 10879 10879 VKASPITNDGEDEFVPSDGLDK 22 2 0 Phospho (STY) _VKAS(ph)PITNDGEDEFVPSDGLDK_ VKAS(0.771)PIT(0.229)NDGEDEFVPSDGLDK VKAS(5.27)PIT(-5.27)NDGEDEFVPS(-48)DGLDK 0 0 1 1 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 805.3676 3 805.031737 2412.07338 66736.53 1.9138 0.0015406 0.10161 8.1801E-05 2.0154 0.0016224 805.366324388936 810.708690621833 100.27 1.1186 100.27 99.775 100.89 7.6294E-06 630 85 11 0 0 0 2.5033E-07 1 57128 51.827 43.007 3 0.61002 0.80574 0 300120000 191860000 108260000 6618 1032 3372 3761 10880 10880 1860;1861 VKASPITNDGEDEFVPSDGLDK 22 2 0 2 Phospho (STY) _VKAS(ph)PITNDGEDEFVPS(ph)DGLDK_ VKAS(0.883)PIT(0.117)NDGEDEFVPS(1)DGLDK VKAS(8.8)PIT(-8.8)NDGEDEFVPS(57.24)DGLDK 0 0 2 1 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 832.0234 3 831.68718 2492.03971 66095.12 1.4943 0.0012428 0.23366 0.00019433 1.728 0.0014371 832.021589459341 837.364421049061 102.2 1.2617 102.2 101.65 102.91 0 710 99 11 0 0 0 7.6635E-13 1 58646 66.884 62.389 3 0.4869 0.62993 0 143690000 91620000 52066000 6619 1032 3372 3762 10881 10881 1860;1861 VKASPITNDGEDEFVPSDGLDKDEYTFSPGK 31 3 0 Phospho (STY) _VKAS(ph)PITNDGEDEFVPSDGLDKDEYTFSPGK_ VKAS(0.579)PIT(0.421)NDGEDEFVPSDGLDKDEYTFSPGK VKAS(1.38)PIT(-1.38)NDGEDEFVPS(-34.6)DGLDKDEY(-40.88)T(-40.86)FS(-40.82)PGK 0 0 1 2 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 866.4015 4 860.138166 3436.52356 65476.55 1.1779 0.0010131 -0.29691 -0.00025538 0.88097 0.00075776 860.388709663926 866.399224697594 112.01 0.95968 112.01 111.62 112.58 0 788 96 15 0 0 0 7.6633E-08 1 71925 42.524 42.524 6 1.3263 1.1442 0 257450000 103360000 154090000 6620 1032 3373 3763 10882 10882 1860;1861;1862 VKASPITNDGEDEFVPSDGLDKDEYTFSPGK 31 3 0 2 Phospho (STY) _VKAS(ph)PITNDGEDEFVPS(ph)DGLDKDEYTFSPGK_ VKAS(0.757)PIT(0.243)NDGEDEFVPS(0.87)DGLDKDEY(0.001)T(0.061)FS(0.068)PGK VKAS(5.19)PIT(-5.19)NDGEDEFVPS(11.54)DGLDKDEY(-31.13)T(-12.06)FS(-11.54)PGK 0 0 2 2 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 886.3936 4 880.129748 3516.48989 63954.32 1.1352 0.00099914 0.11331 9.9731E-05 1.2485 0.0010989 880.380743753133 886.39106139356 116.75 0.80229 116.75 116.46 117.26 0 678 76 15 0 0 0 5.7204E-19 1 75391 63.201 56.95 15 1.0701 0.92788 0 194930000 89939000 104990000 6621 1032 3373 3764 10883 10883 1860;1861;1862 VKASPITNDGEDEFVPSDGLDKDEYTFSPGK 31 3 0 3 Phospho (STY) _VKAS(ph)PITNDGEDEFVPS(ph)DGLDKDEYTFS(ph)PGK_ VKAS(0.999)PIT(0.001)NDGEDEFVPS(0.995)DGLDKDEY(0.005)T(0.01)FS(0.99)PGK VKAS(29.81)PIT(-29.81)NDGEDEFVPS(23.74)DGLDKDEY(-23.74)T(-20.1)FS(20.1)PGK 0 0 3 2 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1199.8282 3 1199.82602 3596.45622 NaN NaN NaN NaN NaN NaN NaN NaN NaN 121.95 1 121.95 121.45 122.45 -7.6294E-06 0 0 0 4.0255E-38 1 78821 119.29 108.58 20 6622 1032 3373 3765 10884 10884 1860;1861;1862 VLAPILPDNFSTPTGSR 17 0 1 Phospho (STY) _VLAPILPDNFS(ph)TPTGSR_ VLAPILPDNFS(0.45)T(0.45)PT(0.085)GS(0.016)R VLAPILPDNFS(0)T(0)PT(-7.26)GS(-14.45)R 0 0 1 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 938.47 2 932.963866 1863.91318 63082.58 0.85523 0.0007979 0.035118 3.2764E-05 0.89035 0.00083067 933.465358715874 937.967889986514 123.88 1.1229 123.88 123.44 124.57 0 677 97 10 0 0 0 2.5242E-22 5 74888 113.4 100.19 4 0.59908 0.75735 0 201760000 125040000 76717000 6623 1212 3374 3766 10885;10886;10887;10888;10889 10887 2435;2989;2990 VLAPILPDNFSTPTGSR 17 0 1 Phospho (STY) _VLAPILPDNFS(ph)TPTGSR_ VLAPILPDNFS(0.393)T(0.393)PT(0.084)GS(0.129)R VLAPILPDNFS(0)T(0)PT(-6.68)GS(-4.84)R 0 0 1 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 933.4665 2 932.963866 1863.91318 62944.14 0.88053 0.0008215 0.15334 0.00014306 1.0339 0.00096456 932.964142034911 937.968128766985 132.73 1.3486 132.73 132.38 133.73 0 917 127 12 0 0 0 2.7975E-09 2 85797 82.59 82.59 4 1.0355 0.6861 0 204550000 101150000 103400000 6624 1212 3374 3766 10890;10891 10891 2435;2989;2990 VLAPILPDNFSTPTGSR 17 0 1 2 Phospho (STY) _VLAPILPDNFST(ph)PT(ph)GSR_ VLAPILPDNFS(0.461)T(0.543)PT(0.579)GS(0.417)R VLAPILPDNFS(-0.75)T(0.75)PT(1.49)GS(-1.49)R 0 0 2 0 Q9NQS7;B3KPD3 Q9NQS7 Q9NQS7 INCENP Inner centromere protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 977.9523 2 972.947031 1943.87951 62179.93 0.46325 0.00045072 0.21952 0.00021358 0.68277 0.0006643 972.947681874752 978.452786551687 132.52 0.5607 132.52 132.22 132.79 0 283 46 8 0 0 0 1.7918E-05 2 80563 63.128 52.223 6 0.49626 0.58659 0 14343000 9229600 5113100 6625 1212 3374 3767 10892;10893 10893 2435;2989;2990 VLDDVSIRSPETK 13 1 1 Phospho (STY) _VLDDVS(ph)IRSPETK_ VLDDVS(0.5)IRS(0.5)PETK VLDDVS(0)IRS(0)PET(-39.4)K 0 0 1 1 E7ETD6;Q12830;F5GXF5 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 769.8768 2 769.876728 1537.7389 69395.09 0.81172 0.00062493 -0.11061 -8.5153E-05 0.70112 0.00053977 769.876693503548 778.887757517338 75.327 1.1372 75.327 74.698 75.836 0 478 98 6 0 0 0 0.00027369 1 38373 79.466 61.88 3 0.6037 0.72216 0 114620000 76509000 38114000 6626 791 3375 3768 10894 10894 1333;1334 VLDDVSIRSPETK 13 1 1 Phospho (STY) _VLDDVS(ph)IRSPETK_ VLDDVS(0.498)IRS(0.498)PET(0.004)K VLDDVS(0)IRS(0)PET(-21.51)K 0 0 1 1 E7ETD6;Q12830;F5GXF5 E7ETD6 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 778.8878 2 769.876728 1537.7389 69743.23 1.2178 0.00093752 -0.35521 -0.00027347 0.86254 0.00066405 769.876561017069 778.887671320963 66.791 1.8581 66.791 66.234 68.092 0 695 167 9 0 0 0 0.0046121 1 41550 47.621 40.932 3 1.9629 1.5156 0 116840000 39593000 77249000 6627 791 3375 3768 10895 10895 1333;1334 VLDTSSLTQSAPASPTNK 18 1 0 Phospho (STY) _VLDTSSLTQSAPAS(ph)PTNK_ VLDTSSLT(0.001)QS(0.001)APAS(0.811)PT(0.187)NK VLDT(-46.15)S(-40.86)S(-40.86)LT(-32.07)QS(-27.56)APAS(6.37)PT(-6.37)NK 0 0 1 0 I3L436;Q8N122 I3L436 I3L436 RPTOR Regulatory-associated protein of mTOR MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 949.4529 2 948.951153 1895.88775 65826.59 0.79112 0.00075073 0.062071 5.8903E-05 0.85319 0.00080963 948.950865385184 953.459133288779 76.508 0.52283 76.508 76.269 76.792 0 152 44 5 0 0 0 6.3715E-07 1 39525 71.601 63.735 7 0.67865 0.82924 0 19154000 10960000 8193800 6628 887 3376 3769 10896 10896 1498 VLEQLTGQTPVFSK 14 1 0 Phospho (STY) _VLEQLTGQT(ph)PVFSK_ VLEQLT(0.004)GQT(0.991)PVFS(0.004)K VLEQLT(-23.53)GQT(23.53)PVFS(-23.53)K 0 0 1 0 Q5VVC9;Q5VVC8;Q08ES8;Q5VVD0;P62913 Q5VVC9 Q5VVC9 RPL11 60S ribosomal protein L11 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 817.9167 2 813.910571 1625.80659 NaN NaN NaN -0.70813 -0.00057636 NaN NaN NaN NaN 103.95 0.32959 103.95 103.73 104.06 0 0 0 0 2.8191E-11 2 60093 97.417 67.163 3 NaN NaN 0 3581600 0 3581600 6629 1021 3377 3770 10897;10898 10898 2904 VLHSSNPVPLYAPNLSPPADSR 22 0 1 Phospho (STY) _VLHSSNPVPLYAPNLS(ph)PPADSR_ VLHSSNPVPLY(0.034)APNLS(0.937)PPADS(0.028)R VLHS(-34)S(-34)NPVPLY(-14.35)APNLS(14.35)PPADS(-15.19)R 0 0 1 0 H0YM74;Q92610 H0YM74 H0YM74 ZNF592 Zinc finger protein 592 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 804.7312 3 804.396685 2410.16822 NaN NaN NaN 0.13916 0.00011194 NaN NaN NaN NaN 114.5 0.65721 114.5 114.18 114.84 0 0 0 0 0.0003377 1 68223 41.188 27.027 5 NaN NaN 0 5539400 5539400 0 6630 863 3378 3771 10899 10899 1472 VLINGSAYQPSFASPNK 17 1 0 Phospho (STY) _VLINGSAYQPS(ph)FASPNK_ VLINGS(0.003)AY(0.025)QPS(0.486)FAS(0.486)PNK VLINGS(-22.62)AY(-12.95)QPS(0)FAS(0)PNK 0 0 1 0 H7C1M2;B3KRA1 H7C1M2 H7C1M2 SON ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 940.9553 2 936.948216 1871.88188 NaN NaN NaN -0.40197 -0.00037663 NaN NaN NaN NaN 100.58 0.54346 100.58 100.27 100.82 -7.6294E-06 0 0 0 0.0025727 1 57719 42.257 28.351 4 NaN NaN 0 6871300 0 6871300 6631 882 3379 3772 10900 10900 1493;1494 VLKQVHPDTGISSK 14 2 0 Unmodified _VLKQVHPDTGISSK_ 0 0 0 1 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;P57053;Q96A08;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257 B2R4S9;A0A024RCJ2 B2R4S9 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS;HIST1H2BA;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 508.9633 3 503.619224 1507.83584 87804.93 0.32323 0.00016279 0.71409 0.00035963 1.0373 0.00052241 503.953560080596 508.962536165008 88.089 0.75774 88.089 87.671 88.429 0 165 67 5 0 0 0 0.0060653 1 48096 54.812 42.185 1 1.0142 1.2616 0 37499000 16330000 21169000 6632 21;211 3380 3773 10901 10901 VLKQVHPDTGISSK 14 2 0 Unmodified _VLKQVHPDTGISSK_ 0 0 0 1 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;P57053;Q96A08;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257 B2R4S9;A0A024RCJ2 B2R4S9 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS;HIST1H2BA;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 508.9617 3 503.619224 1507.83584 NaN NaN NaN -0.93731 -0.00047205 NaN NaN NaN NaN 86.641 0.32496 86.641 86.334 86.659 0 0 0 0 0.0045268 1 46974 51.771 28.653 1 NaN NaN 0 11343000 0 11343000 6633 21;211 3380 3773 10902 10902 VLKQVHPDTGISSK 14 2 0 Unmodified _VLKQVHPDTGISSK_ 0 0 0 1 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;P57053;Q96A08;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257 B2R4S9;A0A024RCJ2 B2R4S9 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS;HIST1H2BA;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 508.9626 3 503.619224 1507.83584 NaN NaN NaN 1.0904 0.00054916 NaN NaN NaN NaN 87.541 0.29028 87.541 87.381 87.671 0 0 0 0 0.020876 1 47547 40.941 30.89 1 NaN NaN 0 19337000 0 19337000 6634 21;211 3380 3773 10903 10903 VLNSYWVGEDSTYK 14 1 0 Unmodified _VLNSYWVGEDSTYK_ 0 0 0 0 A0A024R2Q4;P61313;E7EQV9;E7EX53;E7ENU7 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 831.3983 2 830.896303 1659.77805 67986.66 1.2864 0.0010689 -0.045224 -3.7576E-05 1.2412 0.0010313 831.397879431933 835.405219922903 99.603 0.47697 99.603 99.31 99.787 7.6294E-06 114 39 5 0 0 0 0.00071803 2 56690 72.652 72.652 1 0.73223 0.89485 0 19230000 11991000 7238500 6635 68 3381 3774 10904;10905 10904 VLNSYWVGEDSTYK 14 1 0 Unmodified _VLNSYWVGEDSTYK_ 0 0 0 0 A0A024R2Q4;P61313;E7EQV9;E7EX53;E7ENU7 A0A024R2Q4 A0A024R2Q4 RPL15 Ribosomal protein L15;60S ribosomal protein L15 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 830.8961 2 830.896303 1659.77805 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.314 1 99.314 98.814 99.814 0 0 0 0 2.7911E-06 1 56598 63.408 46.466 1 6636 68 3381 3774 10906 10906 VLNTGSDVEEAVADALK 17 1 0 Phospho (STY) _VLNT(ph)GSDVEEAVADALK_ VLNT(0.5)GS(0.5)DVEEAVADALK VLNT(0)GS(0)DVEEAVADALK 0 0 1 0 Q96F87;E3W994;J3KR49;O75122 Q96F87 Q96F87 CLASP2 CLIP-associating protein 2 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 905.9277 2 905.927146 1809.83974 NaN NaN NaN 0.29652 0.00026863 NaN NaN NaN NaN 128.5 0.24437 128.5 128.31 128.56 0 0 0 0 9.2564E-08 2 78028 83.314 66.682 2 NaN NaN 0 4517600 4517600 0 6637 782 3382 3775 10907;10908 10908 1325;2816 VLPEVDLDSGK 11 1 0 Phospho (STY) _VLPEVDLDS(ph)GK_ VLPEVDLDS(1)GK VLPEVDLDS(50.21)GK 0 0 1 0 B3KXW2;A0A024R283;Q9HCE3 B3KXW2 B3KXW2 ZNF532 Zinc finger protein 532 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 625.8173 2 626.297051 1250.57955 NaN NaN NaN NaN NaN NaN NaN NaN NaN 93.232 1 93.232 92.732 93.732 7.6294E-06 0 0 0 0.0052979 1 51906 50.207 30.446 1 6638 61 3383 3776 10909 10909 82 VLREEQEHK 9 1 1 Unmodified _VLREEQEHK_ 0 0 0 1 Q15021;B4E0B7;B3KY03;E7EN77;Q6ZV00 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 395.8826 3 389.875405 1166.60439 94949.59 -0.41734 -0.00016271 0.5987 0.00023342 0.18135 7.0706E-05 389.875577718194 395.883096556667 68.127 0.91339 68.127 67.928 68.842 0 386 83 8 0 0 0 0.033845 1 33614 35.652 35.652 1 0.86467 1.053 0 454700000 235630000 219080000 6639 1067 3384 3777 10910 10910 VLRKLPGR 8 1 2 Unmodified _VLRKLPGR_ 0 0 0 2 A0A0A0MS59;Q6ZRS2;A0A0C4DFX4 A0A0A0MS59 A0A0A0MS59 SRCAP Helicase SRCAP MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 938.4147 1 938.625796 937.618519 61279.54 0.76002 0.00071337 0.27426 0.00025742 1.0343 0.0009708 938.624696271394 966.656803422513 134.93 0.12964 134.93 134.86 134.99 0 12 5 4 0 0 0 0.034657 1 87121 1.0012 1.0012 1 8.1708 7.79 0 18795000 1450400 17345000 6640 292 3385 3778 10911 10911 VLSPGVSHR 9 0 1 Phospho (STY) _VLS(ph)PGVSHR_ VLS(1)PGVSHR VLS(42.74)PGVS(-42.74)HR 0 0 1 0 Q14676;A1Z5I7;A1Z5I6;A2AB07;A2AB05 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 521.26 2 516.255324 1030.49609 86212.4 0.59549 0.00030742 -0.30276 -0.0001563 0.29273 0.00015112 516.25508881305 521.259165342193 28.268 0.24501 28.268 28.121 28.366 1.9073E-06 47 16 4 0 0 0 0.0022781 1 14120 70.942 45.115 2 1.6421 1.3211 0 7949300 3212400 4736900 6641 1059 3386 3779 10912 10912 1986 VLSPLIIK 8 1 0 Phospho (STY) _VLS(ph)PLIIK_ VLS(1)PLIIK VLS(66.62)PLIIK 0 0 1 0 Q8NCN4 Q8NCN4 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 481.7883 2 481.787937 961.56132 87868.45 0.32976 0.00015887 0.033374 1.6079E-05 0.36313 0.00017495 481.787812033076 485.795032990598 121.27 0.84266 121.27 120.92 121.77 0 230 66 5 0 0 0 0.0087694 1 73059 66.621 41.699 1 0.60315 0.72212 0 14041000 7784600 6256300 6642 1157 3387 3780 10913 10913 2231 VLSPLIIK 8 1 0 Phospho (STY) _VLS(ph)PLIIK_ VLS(1)PLIIK VLS(61.56)PLIIK 0 0 1 0 Q8NCN4 Q8NCN4 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 485.7953 2 481.787937 961.56132 88268.05 0.62533 0.00030128 -0.19838 -9.5575E-05 0.42695 0.0002057 481.787774247422 485.794857821956 129.27 0.92264 129.27 128.78 129.7 0 349 82 6 0 0 0 0.011686 1 83228 61.56 36.637 1 1.99 1.5079 0 10874000 4028300 6846200 6643 1157 3387 3780 10914 10914 2231 VLSPLIIKSTPR 12 1 1 3 Phospho (STY) _VLS(ph)PLIIKS(ph)T(ph)PR_ VLS(1)PLIIKS(1)T(1)PR VLS(98.94)PLIIKS(98.94)T(98.94)PR 0 0 3 1 Q8NCN4 Q8NCN4 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 782.8727 2 782.371058 1562.72756 69035.34 0.8239 0.0006446 0.2298 0.00017979 1.0537 0.00082438 782.371487948972 791.382280899251 120.27 0.64297 120.27 119.98 120.62 0 255 59 6 0 0 0 4.6104E-07 1 72372 98.943 88.711 1 0.59411 0.66412 0 17098000 11702000 5396100 6644 1157 3388 3781 10915 10915 2231;2232;2963 VLSRNSADDEELTNDSLTLSQSK 23 1 1 Phospho (STY) _VLS(ph)RNSADDEELTNDSLTLSQSK_ VLS(0.498)RNS(0.498)ADDEELT(0.003)NDSLTLSQSK VLS(0)RNS(0)ADDEELT(-21.76)NDS(-35.25)LT(-40.69)LS(-46.78)QS(-47.14)K 0 0 1 1 A0A0U1RRH6;O94880 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 868.4038 3 868.06751 2601.1807 66580.93 1.2094 0.0010498 -0.5126 -0.00044497 0.69677 0.00060484 868.401248691943 874.408436782068 92.7 0.65617 92.7 92.336 92.992 -7.6294E-06 206 57 7 0 0 0 4.2124E-07 1 51617 47.564 39.667 7 0.81215 0.9313 0 24487000 13522000 10964000 6645 368 3389 3782 10916 10916 581;582;583 VLSRNSADDEELTNDSLTLSQSK 23 1 1 Phospho (STY) _VLS(ph)RNSADDEELTNDSLTLSQSK_ VLS(0.499)RNS(0.499)ADDEELT(0.001)NDSLTLSQSK VLS(0)RNS(0)ADDEELT(-26.08)NDS(-36.47)LT(-40.83)LS(-48.08)QS(-50.25)K 0 0 1 1 A0A0U1RRH6;O94880 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 874.4098 3 868.06751 2601.1807 NaN NaN NaN -0.29926 -0.00025978 NaN NaN NaN NaN 92.641 0.38956 92.641 92.325 92.715 0 0 0 0 5.6719E-07 1 51270 51.234 37.218 7 NaN NaN 0 12790000 0 12790000 6646 368 3389 3782 10917 10917 581;582;583 VLSRNSADDEELTNDSLTLSQSK 23 1 1 2 Phospho (STY) _VLSRNS(ph)ADDEELTNDS(ph)LTLSQSK_ VLS(0.404)RNS(0.596)ADDEELT(0.009)NDS(0.768)LT(0.201)LS(0.02)QS(0.002)K VLS(-1.72)RNS(1.72)ADDEELT(-19.86)NDS(5.87)LT(-5.87)LS(-16)QS(-25.51)K 0 0 2 1 A0A0U1RRH6;O94880 A0A0U1RRH6 A0A0U1RRH6 PHF14 PHD finger protein 14 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 894.7255 3 894.722953 2681.14703 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.453 1 89.453 88.953 89.953 0 0 0 0 5.6232E-08 1 49021 69.523 57.478 21 6647 368 3389 3783 10918 10918 581;582;583 VLTPPQAAGDGILATTANQR 20 0 1 Phospho (STY) _VLT(ph)PPQAAGDGILATTANQR_ VLT(1)PPQAAGDGILATTANQR VLT(69.41)PPQAAGDGILAT(-69.41)T(-72.56)ANQR 0 0 1 0 B4DFE2;A8K5V5;Q96QT6;K7EPF7;Q0VAI6;C9J9G2 B4DFE2 B4DFE2 PHF12 PHD finger protein 12 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1037.5179 2 1037.52007 2073.02558 NaN NaN NaN -0.37134 -0.00038528 NaN NaN NaN NaN 114.03 0.32317 114.03 113.86 114.18 0 0 0 0 6.2511E-12 1 67801 78.674 62.324 3 NaN NaN 0 6086500 6086500 0 6648 476 3390 3784 10919 10919 2747 VLVDPESGR 9 0 1 Phospho (STY) _VLVDPES(ph)GR_ VLVDPES(1)GR VLVDPES(43.31)GR 0 0 1 0 E7EW31 E7EW31 E7EW31 PROB1 Proline-rich basic protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 531.2486 2 526.244621 1050.47469 83265.42 0.38858 0.00020449 0.24952 0.00013131 0.6381 0.0003358 526.244736226795 531.248572526016 58.568 1.1398 58.568 58.033 59.173 0 281 89 5 0 0 0 0.024025 1 25811 43.308 6.1165 1 0.76186 0.92563 0 20403000 11410000 8993200 6649 795 3391 3785 10920 10920 1366 VLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHR 33 0 1 Unmodified _VLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHR_ 0 0 0 0 Q96BS4;P22087;M0R299;M0QXL5;M0R2Q4;B4DLD4;M0R0P1 Q96BS4 Q96BS4 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 857.947 4 854.942581 3415.74122 65453.23 1.0582 0.00090467 0.048755 4.1683E-05 1.1069 0.00094635 855.444123598796 857.695111814284 134.25 0.12967 134.25 134.17 134.3 0 86 10 11 0 0 0 0.017951 2 86597 13.255 13.255 1 0.99081 0.78576 0 9817200 4606900 5210300 6650 974 3392 3786 10921;10922 10922 VMENSSGTPDILTR 14 0 1 Oxidation (M),Phospho (STY) _VM(ox)ENSSGT(ph)PDILTR_ VM(1)ENSSGTPDILTR VMENSS(0.01)GT(0.987)PDILT(0.002)R VM(126.16)ENSSGTPDILTR VMENS(-39.08)S(-19.74)GT(19.74)PDILT(-26.05)R 0 1 1 0 J3KTD6;Q96GD4;J3KRF8;J3QR41;J3QLN8;J3KRJ2 J3KTD6 J3KTD6 AURKB Aurora kinase B MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 813.36 2 808.355303 1614.69605 68093.23 0.62061 0.00050168 -0.15438 -0.0001248 0.46623 0.00037688 808.355255217659 813.359260263163 73.815 1.001 73.815 73.416 74.417 0 385 85 6 0 0 0 2.0413E-23 3 37507 126.16 99.488 4 0.9726 1.2244 0 50702000 23118000 27583000 6651 893 3393 3787 10923;10924;10925 10923 246 2840 VMSPENFPTASVEGK 15 1 0 Oxidation (M),Phospho (STY) _VM(ox)S(ph)PENFPTASVEGK_ VM(1)SPENFPTASVEGK VMS(1)PENFPTASVEGK VM(70.78)SPENFPTASVEGK VMS(43.02)PENFPT(-43.02)AS(-55.41)VEGK 0 1 1 0 B7ZML1;Q3L8U1;H3BRU9;Q8N4Q2;H3BSP3;Q8NAR9;H3BTW3;B4DR07 B7ZML1 B7ZML1 CHD9 Chromodomain-helicase-DNA-binding protein 9 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 848.8738 2 844.865503 1687.71645 66418.98 1.1236 0.00094933 -0.2659 -0.00022465 0.85774 0.00072467 844.865426399392 848.872444487882 80.781 0.86858 80.781 80.412 81.28 0 323 81 6 0 0 0 0.00023522 1 51649 70.784 64.094 3 1.3324 0.89651 0 26664000 11648000 15017000 6652 724 3394 3788 10926 10926 188 1196 VMTVSFHK 8 1 0 Oxidation (M) _VM(ox)TVSFHK_ VM(1)TVSFHK VM(63.57)TVSFHK 0 1 0 0 B3KUJ5;Q92769;E7ESJ6;O15379;Q6IT96;B5BU61;Q13547;Q5TEE2;B4DSK9;B7Z3S4 B3KUJ5;Q6IT96 B3KUJ5 HDAC2;HDAC3;HDAC1 Histone deacetylase;Histone deacetylase 2;Histone deacetylase 3;Histone deacetylase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 482.7498 2 482.74967 963.484787 89904.51 0.29021 0.0001401 0.31112 0.00015019 0.60133 0.00029029 482.749782563748 486.756631356181 72.319 0.49069 72.319 72.085 72.576 0 107 39 4 0 0 0 0.023009 1 36476 63.565 37.828 1 1.7612 2.1418 0 18092000 7922800 10169000 6653 601;690 3395 3789 10927 10927 157 VNEHEQDGNELQTTPEFR 18 0 1 Phospho (STY) _VNEHEQDGNELQTT(ph)PEFR_ VNEHEQDGNELQT(0.24)T(0.76)PEFR VNEHEQDGNELQT(-5)T(5)PEFR 0 0 1 0 E7ENF1;G5EA44;F5H7W8;Q96C57;F5H3K2;B4DRA4;B4DWJ9 E7ENF1 E7ENF1 C12orf43 Uncharacterized protein C12orf43 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 741.9854 3 741.64985 2221.92772 72928.27 0.92426 0.00068548 -0.15718 -0.00011658 0.76708 0.0005689 741.984066786162 745.319988537006 76.458 0.55714 76.458 76.181 76.739 0 147 47 5 0 0 0 1.8573E-06 4 39592 58.964 50.464 2 0.87477 1.0758 0 26345000 12901000 13444000 6654 788 3396 3790 10928;10929;10930;10931 10928 2817 VNFPENGFLSPDK 13 1 0 Phospho (STY) _VNFPENGFLS(ph)PDK_ VNFPENGFLS(1)PDK VNFPENGFLS(180.11)PDK 0 0 1 0 B7Z5C0;Q9NXZ8;P31689 B7Z5C0 B7Z5C0 HDJ2;DNAJA1 DnaJ homolog subfamily A member 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 772.3457 2 772.345064 1542.67557 68581.7 0.67752 0.00052328 -0.096471 -7.4509E-05 0.58105 0.00044877 772.344947045134 776.352133021737 111.85 1.1022 111.85 111.36 112.46 0 672 95 10 0 0 0 3.5429E-66 2 66497 180.11 180.11 1 0.98217 1.2139 0 418300000 209710000 208590000 6655 707 3397 3791 10932;10933 10932 1172 VNFPENGFLSPDK 13 1 0 Phospho (STY) _VNFPENGFLS(ph)PDK_ VNFPENGFLS(1)PDK VNFPENGFLS(78.81)PDK 0 0 1 0 B7Z5C0;Q9NXZ8;P31689 B7Z5C0 B7Z5C0 HDJ2;DNAJA1 DnaJ homolog subfamily A member 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 772.346 2 772.345064 1542.67557 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.39 1 111.39 110.89 111.89 0 0 0 0 1.8884E-05 1 65910 78.814 63.548 1 6656 707 3397 3791 10934 10934 1172 VNFPENGFLSPDK 13 1 0 Phospho (STY) _VNFPENGFLS(ph)PDK_ VNFPENGFLS(1)PDK VNFPENGFLS(50.1)PDK 0 0 1 0 B7Z5C0;Q9NXZ8;P31689 B7Z5C0 B7Z5C0 HDJ2;DNAJA1 DnaJ homolog subfamily A member 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 772.3461 2 772.345064 1542.67557 69066.48 1.2762 0.00098565 0.20373 0.00015735 1.4799 0.001143 772.345394041161 776.352238761408 118.4 1.7665 118.4 117.76 119.53 -7.6294E-06 1123 158 11 0 0 0 0.0056315 2 76559 50.102 43.249 1 0.73792 0.49276 0 286830000 162420000 124400000 6657 707 3397 3791 10935;10936 10936 1172 VNLSPVIR 8 0 1 Phospho (STY) _VNLS(ph)PVIR_ VNLS(1)PVIR VNLS(47.71)PVIR 0 0 1 0 Q8IV32 Q8IV32 Q8IV32 CCDC71 Coiled-coil domain-containing protein 71 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 489.2636 2 489.262617 976.510682 NaN NaN NaN 0.32062 0.00015687 NaN NaN NaN NaN 97.501 0.77385 97.501 97.201 97.975 -7.6294E-06 0 0 0 0.018063 1 55121 47.706 29.034 1 NaN NaN 0 7963400 7963400 0 6658 1143 3398 3792 10937 10937 2189 VNLSPVIR 8 0 1 Phospho (STY) _VNLS(ph)PVIR_ VNLS(1)PVIR VNLS(52.17)PVIR 0 0 1 0 Q8IV32 Q8IV32 Q8IV32 CCDC71 Coiled-coil domain-containing protein 71 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 494.2666 2 489.262617 976.510682 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.52 1 100.52 100.02 101.02 0 0 0 0 0.011633 1 64640 52.167 20.04 1 6659 1143 3398 3792 10938 10938 2189 VNTLIRPDGEK 11 1 1 Unmodified _VNTLIRPDGEK_ 0 0 0 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 630.3575 2 621.346052 1240.67755 76675.98 0.74697 0.00046412 -0.11078 -6.8835E-05 0.63618 0.00039529 621.345962237052 630.357170581304 77.354 1.0592 77.354 77.022 78.081 0 469 94 7 0 0 0 5.771E-14 1 40133 139.86 112.74 1 0.62254 0.74895 0 177670000 109570000 68106000 6660 511 3399 3793 10939 10939 VNTLIRPDGEK 11 1 1 Unmodified _VNTLIRPDGEK_ 0 0 0 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 414.2067 3 414.56646 1240.67755 96092.82 0.24113 9.9966E-05 0.79086 0.00032786 1.032 0.00042783 414.566304758486 420.573822167131 75.736 0.93254 75.736 75.384 76.316 0 206 81 5 0 0 0 0.029082 1 39122 42.843 34.356 1 0.72404 0.8438 0 32243000 18387000 13856000 6661 511 3399 3793 10940 10940 VNTLIRPDGEK 11 1 1 Unmodified _VNTLIRPDGEK_ 0 0 0 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-SECPEP 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 621.8483 2 621.346052 1240.67755 78988.38 1.0253 0.00063707 0.039033 2.4253E-05 1.0643 0.00066133 621.345906206215 630.357317763241 32.452 0.80827 32.452 32.102 32.91 0 204 63 5 0 0 0 0.033659 1 17412 40.727 26.054 1 0.73905 0.63293 0 7406000 3822200 3583700 6662 511 3399 3793 10941 10941 VNTLIRPDGEKK 12 2 1 Unmodified _VNTLIRPDGEKK_ 0 0 0 2 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 457.6002 3 457.264781 1368.77251 89275.53 0.5278 0.00024134 0.18463 8.4426E-05 0.71243 0.00032577 457.264774080286 465.943651742178 93.811 0.46886 93.811 93.573 94.042 7.6294E-06 118 39 4 0 0 0 0.017305 1 52332 27.967 17.915 1 0.77443 0.90589 0 26313000 13930000 12383000 6663 511 3400 3794 10942 10942 VNTLIRPDGEKK 12 2 1 Unmodified _VNTLIRPDGEKK_ 0 0 0 2 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 H7BY10 RPL23A 60S ribosomal protein L23a MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 457.2648 3 457.264781 1368.77251 90328.14 -0.21016 -9.6098E-05 0.14792 6.7641E-05 -0.062233 -2.8457E-05 457.264695467639 465.943811242658 22.623 0.30422 22.623 22.453 22.757 0 81 17 6 0 0 0 0.0095922 1 9174 34.685 20.427 1 0.78195 0.6694 0 9826000 4943900 4882100 6664 511 3400 3794 10943 10943 VNVTVDYIRPASPATETVPAFSER 24 0 2 Phospho (STY) _VNVTVDYIRPAS(ph)PATETVPAFSER_ VNVT(0.019)VDY(0.053)IRPAS(0.664)PAT(0.232)ET(0.023)VPAFS(0.009)ER VNVT(-15.39)VDY(-10.99)IRPAS(4.57)PAT(-4.57)ET(-14.51)VPAFS(-18.6)ER 0 0 1 1 B2R5U1;B4E299;B3KU67;A0A140VK49;Q59FF0;I6TRR8;Q7KZF4 B2R5U1 B2R5U1 SND1 Staphylococcal nuclease domain-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 907.4515 3 900.44073 2698.30036 66948.19 0.72159 0.00064975 0.51005 0.00045927 1.2316 0.001109 900.775028718367 907.448193485028 114.81 0.60005 114.81 114.5 115.1 0 127 53 4 0 0 0 2.8303E-06 1 68262 43.256 43.256 6 2.1095 2.5337 0 15104000 5074300 10029000 6665 382 3401 3795 10944 10944 601 VPDEEENEESDNEKETEK 18 2 0 Phospho (STY) _VPDEEENEES(ph)DNEKETEK_ VPDEEENEES(1)DNEKETEK VPDEEENEES(33.33)DNEKET(-33.33)EK 0 0 1 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1115.9294 2 1115.43137 2228.84819 55584.83 0.4471 0.00049871 -2.8207 -0.0031463 -2.3736 -0.0026476 1115.92924198727 1123.94330232585 36.929 1.6952 36.929 36.235 37.93 0 1080 157 10 0 0 0 5.0272E-05 2 12447 50.897 50.897 2 0.83949 0.91732 0 13662000 7334000 6327600 6666 962 3402 3796 10945;10946 10946 1687 VPDEEENEESDNEKETEK 18 2 0 Phospho (STY) _VPDEEENEES(ph)DNEKETEK_ VPDEEENEES(0.999)DNEKET(0.001)EK VPDEEENEES(30.76)DNEKET(-30.76)EK 0 0 1 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 749.6312 3 743.956674 2228.84819 67498.77 0.88862 0.00066109 -3.2211 -0.0023963 -2.3325 -0.0017352 744.287911567913 749.299437756569 36.998 1.7432 36.998 36.199 37.942 3.8147E-06 1085 161 11 0 0 0 2.5673E-05 1 12469 50.752 41.96 2 0.83476 0.95033 0 18545000 10454000 8090500 6667 962 3402 3796 10947 10947 1687 VPDEEENEESDNEKETEK 18 2 0 Phospho (STY) _VPDEEENEES(ph)DNEKETEK_ VPDEEENEES(1)DNEKETEK VPDEEENEES(47.21)DNEKET(-47.21)EK 0 0 1 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1115.9342 2 1115.43137 2228.84819 56568.72 0.48403 0.0005399 -0.00040046 -4.4668E-07 0.48363 0.00053945 1115.93324534843 1123.44557056203 18.143 1.1954 18.143 17.873 19.068 0 463 55 15 0 0 0 4.1427E-63 2 5159 164.99 151.56 2 1.3225 0.95367 0 1549300000 661530000 887760000 6668 962 3402 3796 10948;10949 10948 1687 VPDEEENEESDNEKETEK 18 2 0 Phospho (STY) _VPDEEENEES(ph)DNEKETEK_ VPDEEENEES(1)DNEKETEK VPDEEENEES(47.23)DNEKET(-47.23)EK 0 0 1 1 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 744.2918 3 743.956674 2228.84819 69114.03 0.88928 0.00066159 0.11423 8.4982E-05 1.0035 0.00074657 744.2915391419 749.299735444726 18.141 0.95882 18.141 17.873 18.832 0 366 43 15 0 0 0 1.7597E-102 1 5181 193.42 182.17 2 1.3385 0.96961 0 1104700000 469830000 634820000 6669 962 3402 3796 10950 10950 1687 VPDSPENELK 10 1 0 Phospho (STY) _VPDS(ph)PENELK_ VPDS(1)PENELK VPDS(48.95)PENELK 0 0 1 0 A0A0U1RR46;A5PKX9;A0A0X1KG69;A0A087WUZ6;B4E2N5;Q8NI35 A0A0U1RR46 A0A0U1RR46 INADL InaD-like protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 604.2661 2 604.265751 1206.51695 80724.98 0.69952 0.0004227 0.51214 0.00030947 1.2117 0.00073216 604.265704291656 608.273663386041 59.35 0.97223 59.35 58.788 59.761 0 205 77 4 0 0 0 0.013566 1 26575 48.948 38.075 1 1.1755 1.3946 0 10657000 5101300 5555800 6670 251 3403 3797 10951 10951 399 VPGEDGTLPPTQGSPLR 17 0 1 Phospho (STY) _VPGEDGTLPPT(ph)QGSPLR_ VPGEDGT(0.001)LPPT(0.499)QGS(0.499)PLR VPGEDGT(-26.24)LPPT(0)QGS(0)PLR 0 0 1 0 Q9Y2F5 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 900.931 2 900.930023 1799.84549 NaN NaN NaN -0.074943 -6.7519E-05 NaN NaN NaN NaN 88.802 1.6753 88.802 88.009 89.685 0 0 0 0 0.005716 1 57013 42.083 22.76 3 NaN NaN 0 11140000 11140000 0 6671 1246 3404 3798 10952 10952 2562;3004 VPKPEPIPEPKEPSPEK 17 3 0 Phospho (STY) _VPKPEPIPEPKEPS(ph)PEK_ VPKPEPIPEPKEPS(1)PEK VPKPEPIPEPKEPS(46.57)PEK 0 0 1 2 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3;E9PCT1;M0R088;B4DED5 A0A0S2Z4W1 A0A0S2Z4W1 SRRM1 Serine/arginine repetitive matrix protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 668.0173 3 660.002613 1976.98601 75639.42 0.62713 0.0004139 -0.10102 -6.6676E-05 0.5261 0.00034723 660.002474950008 668.01670140252 84.587 1.6611 84.587 83.72 85.381 0 750 154 8 0 0 0 7.3022E-05 1 45800 46.569 41.251 1 0.99686 1.2626 0 100160000 49939000 50220000 6672 353 3405 3799 10953 10953 558 VPLGKGRR 8 1 2 Unmodified _VPLGKGRR_ 0 0 0 2 D6RAZ3;D6R9T3;Q96FZ2 D6RAZ3 D6RAZ3 HMCES Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 910.5951 1 882.563195 881.555919 63018.94 0.94644 0.00083529 1.8166 0.0016033 2.763 0.0024386 882.564333703842 910.595474181235 139 0.70171 139 138.77 139.47 -1.5259E-05 337 83 8 0 0 0 0.034885 1 82379 0 0 1 0.74815 0.86635 0 62129000 32726000 29404000 6673 773 3406 3800 10954 10954 VPPAINQFTQALDR 14 0 1 Unmodified _VPPAINQFTQALDR_ 0 0 0 0 P62424;Q5T8U3 P62424 P62424 RPL7A 60S ribosomal protein L7a MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 785.4232 2 785.422822 1568.83109 NaN NaN NaN NaN NaN NaN NaN NaN NaN 119.29 1 119.29 118.79 119.79 0 0 0 0 0.0094585 1 76952 42.743 5.2677 1 6674 1019 3407 3801 10955 10955 VPPFVDLNVNSNEGK 15 1 0 Phospho (STY) _VPPFVDLNVNS(ph)NEGK_ VPPFVDLNVNS(1)NEGK VPPFVDLNVNS(85.28)NEGK 0 0 1 0 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254 Q4ZG72 Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 854.9029 2 854.900734 1707.78692 65936.79 0.76666 0.00065541 0.028932 2.4734E-05 0.79559 0.00068015 854.900865528586 858.908025951447 113.49 0.92348 113.49 112.99 113.91 0 494 85 8 0 0 0 2.4579E-06 2 67216 85.28 72.788 1 0.9506 1.1865 0 68823000 36127000 32696000 6675 182 3408 3802 10956;10957 10957 291 VPQLEIVPNSAEER 14 0 1 Phospho (STY) _VPQLEIVPNS(ph)AEER_ VPQLEIVPNS(1)AEER VPQLEIVPNS(153.23)AEER 0 0 1 0 CON__P02662 CON__P02662 CON__P02662 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 830.9009 2 830.900734 1659.78692 NaN NaN NaN 0.30792 0.00025585 NaN NaN NaN NaN 103.21 2.1319 103.21 102.5 104.63 0 0 0 0 5.2945E-76 2 59748 153.23 102.39 1 NaN NaN 0 593890000 593890000 0 + 6676 751 3409 3803 10958;10959 10959 1263 VPQLEIVPNSAEER 14 0 1 Phospho (STY) _VPQLEIVPNS(ph)AEER_ VPQLEIVPNS(1)AEER VPQLEIVPNS(84.84)AEER 0 0 1 0 CON__P02662 CON__P02662 CON__P02662 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 830.9 2 830.900734 1659.78692 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.68 1 104.68 104.18 105.18 0 0 0 0 0.00041168 1 60640 84.842 57.635 1 + 6677 751 3409 3803 10960 10960 1263 VPSIELR 7 0 1 Phospho (STY) _VPS(ph)IELR_ VPS(1)IELR VPS(42.29)IELR 0 0 1 0 Q02388 Q02388 Q02388 COL7A1 Collagen alpha-1(VII) chain ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 903.4602 1 893.44921 892.441933 NaN NaN NaN 1.4138 0.0012632 NaN NaN NaN NaN 124.14 0.94426 124.14 123.68 124.63 -7.6294E-06 0 0 0 0.028141 1 75293 42.287 12.62 1 NaN NaN 0 4078400 0 4078400 6678 1031 3410 3804 10961 10961 1859 VPSPPDEHQEAENAVSSGNR 20 0 1 Phospho (STY) _VPS(ph)PPDEHQEAENAVSSGNR_ VPS(1)PPDEHQEAENAVSSGNR VPS(70.57)PPDEHQEAENAVS(-70.57)S(-75.03)GNR 0 0 1 0 A8K4B4;Q9BXS6 A8K4B4 A8K4B4 NUSAP1 Nucleolar and spindle-associated protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 737.6526 3 733.981599 2198.92297 71290.02 0.80851 0.00059343 -0.18183 -0.00013346 0.62668 0.00045997 734.315583748636 737.651898020724 58.094 1.5611 58.094 57.261 58.822 0 976 126 12 0 0 0 8.6442E-18 3 25645 91.589 69.276 3 0.34922 0.44181 0 308110000 226180000 81928000 6679 458 3411 3805 10962;10963;10964 10963 798 VPSPPDEHQEAENAVSSGNR 20 0 1 Phospho (STY) _VPS(ph)PPDEHQEAENAVSSGNR_ VPS(1)PPDEHQEAENAVSSGNR VPS(156.97)PPDEHQEAENAVS(-156.97)S(-161.55)GNR 0 0 1 0 A8K4B4;Q9BXS6 A8K4B4 A8K4B4 NUSAP1 Nucleolar and spindle-associated protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 734.3164 3 733.981599 2198.92297 70610.24 0.88244 0.0006477 0.016271 1.1943E-05 0.89871 0.00065964 734.31608790706 737.317559429319 49 1.9305 49 48.239 50.17 -3.8147E-06 1689 184 13 0 0 0 4.1372E-114 3 29787 191.41 159.64 3 0.56149 0.3623 0 763200000 488390000 274810000 6680 458 3411 3805 10965;10966;10967 10967 798 VPSPPDEHQEAENAVSSGNR 20 0 1 Phospho (STY) _VPS(ph)PPDEHQEAENAVSSGNR_ VPS(1)PPDEHQEAENAVSSGNR VPS(42.77)PPDEHQEAENAVS(-42.77)S(-42.77)GNR 0 0 1 0 A8K4B4;Q9BXS6 A8K4B4 A8K4B4 NUSAP1 Nucleolar and spindle-associated protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1100.4695 2 1100.46876 2198.92297 57347.64 0.5184 0.00057049 0.13689 0.00015064 0.65529 0.00072113 1100.97020254343 1105.47345254339 49.012 1.2854 49.012 48.411 49.696 0 966 122 10 0 0 0 1.3824E-05 1 29684 51.771 37.445 3 0.57334 0.38237 0 147710000 90368000 57343000 6681 458 3411 3805 10968 10968 798 VPSPSALLVDNPTPFGNAK 19 1 0 Phospho (STY) _VPS(ph)PSALLVDNPTPFGNAK_ VPS(0.847)PS(0.153)ALLVDNPTPFGNAK VPS(7.44)PS(-7.44)ALLVDNPT(-34.99)PFGNAK 0 0 1 0 C9JF25;C9JED2;A8K594;Q9P0V3 C9JF25 C9JF25 SH3BP4 SH3 domain-binding protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1002.9962 2 1002.49553 2002.97651 64049.71 0.62544 0.000627 -0.28308 -0.00028379 0.34236 0.00034321 1002.99666120717 1007.00401537706 126.35 0.42245 126.35 126.15 126.57 0 106 36 5 0 0 0 0.00045434 1 76603 40.066 40.066 3 1.4768 1.7501 0 5649400 2007500 3641900 6682 475 3412 3806 10969 10969 829 VPVPGPGSGGNGPER 15 0 1 Phospho (STY) _VPVPGPGS(ph)GGNGPER_ VPVPGPGS(1)GGNGPER VPVPGPGS(75.67)GGNGPER 0 0 1 0 J3KPS2;Q6ZRV2 J3KPS2 J3KPS2 FAM83H Protein FAM83H MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 728.8342 2 728.832655 1455.65076 72540.63 0.89772 0.00065429 -0.14525 -0.00010587 0.75247 0.00054842 728.832808918725 733.83673112604 57.15 1.2129 57.15 56.463 57.676 0 585 101 9 0 0 0 5.7734E-05 2 24985 75.669 57.357 1 0.80184 1.0097 0 52290000 29537000 22753000 6683 890 3413 3807 10970;10971 10971 1516 VQALEEANNDLENK 14 1 0 Unmodified _VQALEEANNDLENK_ 0 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 793.8865 2 793.886466 1585.75838 NaN NaN NaN 0.57207 0.00045416 NaN NaN NaN NaN 70.907 0.068115 70.907 70.863 70.931 0 0 0 0 9.8764E-18 1 35535 124.39 80.943 1 NaN NaN 0 3676000 3676000 0 + 6684 757 3414 3808 10972 10972 VQALEEANNDLENK 14 1 0 Unmodified _VQALEEANNDLENK_ 0 0 0 0 CON__P35527;P35527 CON__P35527 CON__P35527 KRT9 Keratin, type I cytoskeletal 9 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 793.8871 2 793.886466 1585.75838 NaN NaN NaN -0.042453 -3.3703E-05 NaN NaN NaN NaN 71.551 1.0126 71.551 70.931 71.944 0 0 0 0 1.6598E-111 2 36042 201.6 133.71 1 NaN NaN 0 41059000 41059000 0 + 6685 757 3414 3808 10973;10974 10974 VQAYEEPSVASSPNGK 16 1 0 Phospho (STY) _VQAYEEPSVASS(ph)PNGK_ VQAYEEPSVAS(0.102)S(0.898)PNGK VQAY(-152.5)EEPS(-44.76)VAS(-9.45)S(9.45)PNGK 0 0 1 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 871.8856 2 871.885281 1741.75601 65476.47 0.65826 0.00057393 -0.096243 -8.3913E-05 0.56202 0.00049002 871.885200570187 875.892313182242 58.987 1.7183 58.987 58.054 59.772 0 750 136 10 0 0 0 3.4469E-100 2 26508 190.19 190.19 4 0.2787 0.34498 0 211150000 165910000 45238000 6686 1175 3415 3809 10975;10976 10976 2308;2309 VQAYEEPSVASSPNGK 16 1 0 Phospho (STY) _VQAYEEPSVAS(ph)SPNGK_ VQAYEEPS(0.028)VAS(0.486)S(0.486)PNGK VQAY(-52.76)EEPS(-12.35)VAS(0)S(0)PNGK 0 0 1 0 Q96F88;Q99575 Q96F88 Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 875.8932 2 871.885281 1741.75601 64532.58 1.026 0.00089459 -0.083041 -7.2403E-05 0.94299 0.00082218 871.885351320122 875.891901064607 55.047 1.9875 55.047 54.303 56.291 -3.8147E-06 1100 172 10 0 0 0 4.8611E-09 2 33737 83.633 83.633 4 0.66359 0.44369 0 133980000 81086000 52893000 6687 1175 3415 3809 10977;10978 10978 2308;2309 VQDTSNTGLGEDIIHQLSK 19 1 0 Phospho (STY) _VQDTS(ph)NTGLGEDIIHQLSK_ VQDT(0.244)S(0.74)NT(0.016)GLGEDIIHQLSK VQDT(-4.82)S(4.82)NT(-16.73)GLGEDIIHQLS(-81.76)K 0 0 1 0 A8K330;Q8IWA0;Q05D27 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 712.6736 3 712.338724 2133.99434 71849.77 0.92079 0.00065591 -0.21428 -0.00015264 0.70651 0.00050327 712.67279102719 715.009985181269 117.93 1.6024 117.93 117.25 118.85 7.6294E-06 1061 141 11 0 0 0 4.2036E-19 3 70863 100.64 100.64 4 0.64597 0.79897 0 300460000 176940000 123520000 6688 452 3416 3810 10979;10980;10981 10981 786;2733 VQDTSNTGLGEDIIHQLSK 19 1 0 Phospho (STY) _VQDT(ph)SNTGLGEDIIHQLSK_ VQDT(0.463)S(0.463)NT(0.074)GLGEDIIHQLSK VQDT(0)S(0)NT(-7.99)GLGEDIIHQLS(-72.74)K 0 0 1 0 A8K330;Q8IWA0;Q05D27 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1072.0127 2 1068.00445 2133.99434 59623.11 0.45374 0.0004846 -0.12127 -0.00012951 0.33248 0.00035509 1068.50577176553 1072.01146259123 117.93 1.3305 117.93 117.36 118.7 0 873 115 11 0 0 0 2.8398E-16 3 70869 92.457 92.457 4 0.64134 0.79404 0 189570000 117750000 71817000 6689 452 3416 3810 10982;10983;10984 10983 786;2733 VQDTSNTGLGEDIIHQLSK 19 1 0 Phospho (STY) _VQDTS(ph)NTGLGEDIIHQLSK_ VQDT(0.27)S(0.696)NT(0.034)GLGEDIIHQLSK VQDT(-4.11)S(4.11)NT(-13.12)GLGEDIIHQLS(-48.09)K 0 0 1 0 A8K330;Q8IWA0;Q05D27 A8K330 A8K330 WDR75 WD repeat-containing protein 75 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 712.6741 3 712.338724 2133.99434 71556.39 1.1519 0.00082051 -0.0018053 -1.286E-06 1.15 0.00081922 712.673332901086 715.01013986155 120.69 1.0338 120.69 120.34 121.37 -7.6294E-06 648 95 13 0 0 0 6.8602E-08 1 77882 62.677 62.677 4 0.86719 0.57797 0 923510000 492970000 430530000 6690 452 3416 3810 10985 10985 786;2733 VQEALR 6 0 1 Unmodified _VQEALR_ 0 0 0 0 Q5ZF00;A0A024R300;Q8IZP6;Q12891 Q5ZF00 Q5ZF00 HYAL2;RNF113B Hyaluronidase;RING finger protein 113B;Hyaluronidase-2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 725.4182 1 715.409714 714.402438 71166.65 0.75356 0.00053911 0.057 4.0779E-05 0.81056 0.00057988 715.409521911065 725.417882167697 64.267 1.6725 64.267 63.312 64.984 0 483 124 6 0 0 0 0.016733 1 29961 35.105 0 1 0.74604 0.94304 0 189850000 108390000 81460000 6691 70 3417 3811 10986 10986 VQEFEHVNGR 10 0 1 Unmodified _VQEFEHVNGR_ 0 0 0 0 B3KY63;F5GWX5;A0A0C4DGG9;Q14839 B3KY63 B3KY63 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 409.1987 3 405.535271 1213.58398 95628.93 -0.099448 -4.033E-05 0.054587 2.2137E-05 -0.044861 -1.8193E-05 405.535224436145 408.871263433573 67.712 0.47084 67.712 67.573 68.044 0 123 38 6 0 0 0 0.011565 1 33460 50.791 40.739 1 0.6987 0.8799 0 53238000 28913000 24325000 6692 324 3418 3812 10987 10987 VQEHEDSGDSEVENEAK 17 1 0 Phospho (STY) _VQEHEDS(ph)GDSEVENEAK_ VQEHEDS(0.998)GDS(0.002)EVENEAK VQEHEDS(27.22)GDS(-27.22)EVENEAK 0 0 1 0 Q9Y5J1;B2RAX6 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 995.3943 2 991.386571 1980.75859 60893.83 0.50059 0.00049627 0.21628 0.00021442 0.71687 0.00071069 991.386779887556 995.393985209555 44.142 1.2972 44.142 43.64 44.937 0 583 95 10 0 0 0 1.5687E-100 1 16153 190.67 168.19 2 1.0652 1.3293 0 69233000 30926000 38307000 6693 1255 3419 3813 10988 10988 2586;2587 VQEHEDSGDSEVENEAK 17 1 0 Phospho (STY) _VQEHEDS(ph)GDSEVENEAK_ VQEHEDS(0.607)GDS(0.393)EVENEAK VQEHEDS(1.89)GDS(-1.89)EVENEAK 0 0 1 0 Q9Y5J1;B2RAX6 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 995.3943 2 991.386571 1980.75859 62193.33 0.53299 0.0005284 -0.048997 -4.8575E-05 0.48399 0.00047982 991.385813272597 995.394273508703 45.836 0.64927 45.836 45.519 46.168 0 177 46 5 0 0 0 0.00020483 1 17303 48.053 39.54 2 0.62906 0.74736 0 11417000 7087800 4329400 6694 1255 3419 3813 10989 10989 2586;2587 VQEHEDSGDSEVENEAK 17 1 0 Phospho (STY) _VQEHEDS(ph)GDSEVENEAK_ VQEHEDS(0.999)GDS(0.001)EVENEAK VQEHEDS(31.21)GDS(-31.21)EVENEAK 0 0 1 0 Q9Y5J1;B2RAX6 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 991.3867 2 991.386571 1980.75859 59951.77 0.0077371 7.6704E-06 0.50717 0.00050281 0.51491 0.00051048 991.387380490159 995.394247898326 21.737 1.1221 21.737 21.416 22.538 0 292 56 12 0 0 0 1.2031E-220 2 8385 250.27 221.69 2 1.407 0.93829 0 649930000 254100000 395830000 6695 1255 3419 3813 10990;10991 10991 2586;2587 VQEHEDSGDSEVENEAK 17 1 0 Phospho (STY) _VQEHEDS(ph)GDSEVENEAK_ VQEHEDS(0.994)GDS(0.006)EVENEAK VQEHEDS(22.14)GDS(-22.14)EVENEAK 0 0 1 0 Q9Y5J1;B2RAX6 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 664.2666 3 661.260139 1980.75859 73853.26 0.67516 0.00044646 0.29701 0.0001964 0.97217 0.00064286 661.260305709573 663.931983035428 21.758 0.54007 21.758 21.566 22.106 0 143 26 10 0 0 0 2.1802E-12 1 8410 94.707 88.591 2 1.5552 1.0287 0 66886000 27808000 39078000 6696 1255 3419 3813 10992 10992 2586;2587 VQEHEDSGDSEVENEAK 17 1 0 Phospho (STY) _VQEHEDSGDS(ph)EVENEAK_ VQEHEDS(0.006)GDS(0.994)EVENEAK VQEHEDS(-22.29)GDS(22.29)EVENEAK 0 0 1 0 Q9Y5J1;B2RAX6 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 661.2607 3 661.260139 1980.75859 73519.41 0.37458 0.0002477 -1.6515 -0.0010921 -1.277 -0.00084441 661.594176215868 663.932163982608 23.03 0.36315 23.03 22.839 23.202 0 108 19 8 0 0 0 4.9511E-05 1 9578 52.095 46.991 2 1.1001 0.78214 0 21771000 11252000 10519000 6697 1255 3419 3813 10993 10993 2586;2587 VQEHEDSGDSEVENEAK 17 1 0 2 Phospho (STY) _VQEHEDS(ph)GDS(ph)EVENEAK_ VQEHEDS(1)GDS(1)EVENEAK VQEHEDS(85.86)GDS(85.86)EVENEAK 0 0 2 0 Q9Y5J1;B2RAX6 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1035.3777 2 1031.36974 2060.72492 NaN NaN NaN 0.67037 0.00069139 NaN NaN NaN NaN 39.385 1.5401 39.385 38.781 40.321 0 0 0 0 3.701E-09 1 13849 85.855 75.574 1 NaN NaN 0 31759000 0 31759000 6698 1255 3419 3814 10994 10994 2586;2587 VQELETSLAELR 12 0 1 Phospho (STY) _VQELET(ph)SLAELR_ VQELET(0.604)S(0.396)LAELR VQELET(1.84)S(-1.84)LAELR 0 0 1 0 B7ZC06;Q08379 B7ZC06 B7ZC06 GOLGA2 Golgin subfamily A member 2 MULTI-SECPEP 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 734.8301 2 734.358171 1466.70179 77377.32 1.2086 0.00088756 -0.023039 -1.6919E-05 1.1856 0.00087064 734.358247760283 739.362150167233 110.08 0.55885 110.08 109.83 110.39 0 142 50 4 0 0 0 0.029701 1 70794 51.939 36.551 2 1.2153 1.0095 0 4830900 2179700 2651100 6699 719 3420 3815 10995 10995 2804 VQVAALQASPPLDQDDR 17 0 1 Phospho (STY) _VQVAALQAS(ph)PPLDQDDR_ VQVAALQAS(1)PPLDQDDR VQVAALQAS(108.75)PPLDQDDR 0 0 1 0 U3KQJ2;B1AN86;B7Z2R3;A0A024R225;B7Z954;A0A024R233;A0A1B0GTW1;Q9UDY2 U3KQJ2 U3KQJ2 TJP2 Tight junction protein ZO-2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 956.9554 2 951.951487 1901.88842 63662.7 0.55394 0.00052733 -0.36597 -0.00034838 0.18798 0.00017895 951.951086524958 956.954946086573 98.995 0.7506 98.995 98.547 99.298 7.6294E-06 288 62 6 0 0 0 7.0549E-17 2 56152 108.75 108.75 1 1.5502 1.9422 0 40795000 19633000 21162000 6700 55 3421 3816 10996;10997 10997 66 VQYLNEAIDTNEK 13 1 0 Phospho (STY) _VQYLNEAIDT(ph)NEK_ VQYLNEAIDT(1)NEK VQY(-34.13)LNEAIDT(34.13)NEK 0 0 1 0 REV__C9JDX1 REV__C9JDX1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 808.8647 2 808.863818 1615.71308 67216.9 0.53937 0.00043627 0.15838 0.00012811 0.69775 0.00056438 808.864055630231 812.871002676617 84.178 3.561 84.178 82.671 86.232 -7.6294E-06 2267 332 10 0 0 0 0.033636 4 44889 63.091 51.58 2 1.0042 1.2373 0 1741800000 882920000 858880000 + 6701 1261 3422 3817 10998;10999;11000;11001 11000 3011 VREYELR 7 0 2 Unmodified _VREYELR_ 0 0 0 1 Q5VVC9;Q5VVC8;Q08ES8;Q5VVD0;P62913 Q5VVC9 Q5VVC9 RPL11 60S ribosomal protein L11 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 482.764 2 482.764166 963.513779 NaN NaN NaN -0.089967 -4.3433E-05 NaN NaN NaN NaN 82.207 1.0228 82.207 81.85 82.873 0 0 0 0 1.3784E-05 1 43748 93.992 46.925 1 NaN NaN 0 82494000 82494000 0 6702 1021 3423 3818 11002 11002 VREYELR 7 0 2 Unmodified _VREYELR_ 0 0 0 1 Q5VVC9;Q5VVC8;Q08ES8;Q5VVD0;P62913 Q5VVC9 Q5VVC9 RPL11 60S ribosomal protein L11 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 322.1787 3 322.178536 963.513779 NaN NaN NaN 0.38615 0.00012441 NaN NaN NaN NaN 82.255 1.0943 82.255 81.884 82.978 0 0 0 0 0.012939 1 43803 69.383 31.738 1 NaN NaN 0 48992000 48992000 0 6703 1021 3423 3818 11003 11003 VREYELR 7 0 2 Unmodified _VREYELR_ 0 0 0 1 Q5VVC9;Q5VVC8;Q08ES8;Q5VVD0;P62913 Q5VVC9 Q5VVC9 RPL11 60S ribosomal protein L11 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 328.8506 3 322.178536 963.513779 NaN NaN NaN NaN NaN NaN NaN NaN NaN 82.512 1 82.512 82.012 83.012 0 0 0 0 0.013949 1 44096 60.478 35.846 1 6704 1021 3423 3818 11004 11004 VREYELR 7 0 2 Unmodified _VREYELR_ 0 0 0 1 Q5VVC9;Q5VVC8;Q08ES8;Q5VVD0;P62913 Q5VVC9 Q5VVC9 RPL11 60S ribosomal protein L11 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 482.764 2 482.764166 963.513779 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.02 1 83.02 82.52 83.52 -7.6294E-06 0 0 0 9.9934E-09 1 44448 104.37 59.644 1 6705 1021 3423 3818 11005 11005 VRRPAGVR 8 0 3 Unmodified _VRRPAGVR_ 0 0 0 2 B4DKU3;Q8IY81 B4DKU3 B4DKU3 FTSJ3 pre-rRNA processing protein FTSJ3 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 304.1944 3 304.194632 909.562067 NaN NaN NaN 0.50737 0.00015434 NaN NaN NaN NaN 80.691 0.2202 80.691 80.545 80.765 0 0 0 0 0.018039 1 42838 44.395 26.547 1 NaN NaN 0 4722300 4722300 0 6706 632 3424 3819 11006 11006 VSAGEPGSHPSPAPR 15 0 1 Phospho (STY) _VSAGEPGSHPS(ph)PAPR_ VSAGEPGS(0.072)HPS(0.928)PAPR VS(-35.11)AGEPGS(-11.13)HPS(11.13)PAPR 0 0 1 0 C9JME2;Q9Y4F1;A0A1B0GV68 C9JME2 C9JME2 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 512.5679 3 509.23135 1524.67222 84408.05 0.2816 0.0001434 -0.38404 -0.00019556 -0.10243 -5.2162E-05 509.231322728005 512.567337861253 44.826 0.77439 44.826 44.369 45.143 0 241 56 6 0 0 0 0.0005839 1 16587 48.288 32.743 3 1.5781 1.7228 0 5256800 2023700 3233100 6707 744 3425 3820 11007 11007 1257 VSAGEPGSHPSPAPR 15 0 1 Phospho (STY) _VSAGEPGSHPS(ph)PAPR_ VSAGEPGS(0.061)HPS(0.939)PAPR VS(-47.53)AGEPGS(-11.86)HPS(11.86)PAPR 0 0 1 0 C9JME2;Q9Y4F1;A0A1B0GV68 C9JME2 C9JME2 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 512.5672 3 509.23135 1524.67222 85915.4 0.19512 9.9362E-05 0.032391 1.6495E-05 0.22751 0.00011586 509.231490776331 512.567460646149 21.712 0.28004 21.712 21.566 21.846 0 57 12 6 0 0 0 0.0004674 1 8434 60.764 40.179 3 2.0066 1.5932 0 9653100 2688100 6964900 6708 744 3425 3820 11008 11008 1257 VSCHDSDDDIMR 12 0 1 Phospho (STY) _VSCHDS(ph)DDDIMR_ VS(0.001)CHDS(0.999)DDDIMR VS(-32.71)CHDS(32.71)DDDIMR 0 0 1 0 A0A024R250;Q76FK4;B4DM91;F8WE42;Q6AI50;F5H101;A6H8Z4;F5GWN9 A0A024R250 A0A024R250 NOL8;DKFZp686P12242 Nucleolar protein 8 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 770.279 2 765.273455 1528.53236 72965.91 1.2337 0.00094412 -0.69486 -0.00053176 0.53885 0.00041236 765.272777421049 770.27756937619 33.608 0.33649 33.608 33.438 33.775 3.8147E-06 73 22 6 0 0 0 0.010732 1 18373 46.481 30.942 2 1.2896 1.0712 0 4926700 1876900 3049800 6709 59 3426 3821 11009 11009 79 VSDQNSPVLPK 11 1 0 Phospho (STY) _VSDQNS(ph)PVLPK_ VS(0.001)DQNS(0.999)PVLPK VS(-31.06)DQNS(31.06)PVLPK 0 0 1 0 Q9UPU5 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 636.3099 2 632.302668 1262.59078 77905.17 0.62171 0.00039311 0.031768 2.0087E-05 0.65347 0.00041319 632.302715807174 636.309617314469 58.615 0.8771 58.615 58.165 59.042 0 210 70 4 0 0 0 0.0092619 2 25974 54.524 45.342 2 2.3006 2.7425 0 12517000 3999400 8517800 6710 1244 3427 3822 11010;11011 11010 2551 VSEFNVSSEGSGEK 14 1 0 Phospho (STY) _VSEFNVS(ph)SEGSGEK_ VSEFNVS(0.831)S(0.159)EGS(0.01)GEK VS(-84.24)EFNVS(7.18)S(-7.18)EGS(-19.16)GEK 0 0 1 0 Q9BVJ6;O60531 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 772.3245 2 768.3167 1534.61885 70132.99 0.76212 0.00058555 -0.59863 -0.00045994 0.16349 0.00012561 768.315915712991 772.323378830424 59.776 1.078 59.776 59.187 60.265 0 357 82 6 0 0 0 2.0975E-17 1 26830 110.97 98.59 4 0.45238 0.57071 0 30400000 19773000 10627000 6711 1199 3428 3823 11012 11012 2387;2388 VSEFNVSSEGSGEK 14 1 0 Phospho (STY) _VSEFNVSSEGS(ph)GEK_ VSEFNVS(0.017)S(0.052)EGS(0.931)GEK VS(-97.23)EFNVS(-17.41)S(-12.55)EGS(12.55)GEK 0 0 1 0 Q9BVJ6;O60531 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 768.3173 2 768.3167 1534.61885 70980.41 0.91373 0.00070204 -0.48248 -0.0003707 0.43126 0.00033134 768.316673497503 772.323642550868 60.832 1.112 60.832 60.123 61.235 3.8147E-06 321 77 6 0 0 0 2.2485E-17 2 27521 110.35 100.99 4 0.88082 1.1134 0 31407000 15715000 15692000 6712 1199 3428 3823 11013;11014 11014 2387;2388 VSEFNVSSEGSGEK 14 1 0 Phospho (STY) _VSEFNVSSEGS(ph)GEK_ VSEFNVS(0.01)S(0.092)EGS(0.898)GEK VS(-93.62)EFNVS(-19.67)S(-9.88)EGS(9.88)GEK 0 0 1 0 Q9BVJ6;O60531 Q9BVJ6 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 768.3184 2 768.3167 1534.61885 69761.48 1.2021 0.00092363 0.11442 8.7911E-05 1.3166 0.0010115 768.316483389937 772.323575353367 54.58 2.0109 54.58 53.807 55.817 0 1019 175 9 0 0 0 8.9605E-12 4 33462 102.15 91.066 4 0.9307 0.61144 0 54898000 29420000 25478000 6713 1199 3428 3823 11015;11016;11017;11018 11017 2387;2388 VSGDDFSVPSK 11 1 0 Phospho (STY) _VS(ph)GDDFSVPSK_ VS(1)GDDFSVPSK VS(73.96)GDDFS(-73.96)VPS(-113.33)K 0 0 1 0 B4DZG2;A0A024R8C1;Q15361 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 613.2651 2 609.257926 1216.5013 77092.45 0.51414 0.00031325 -0.153 -9.3219E-05 0.36114 0.00022003 609.257893656639 613.26500989066 70.516 1.3531 70.516 69.723 71.076 0 529 131 6 0 0 0 4.1776E-14 4 35355 134.56 109.09 3 0.88553 1.1078 0 63479000 34143000 29336000 6714 150 3429 3824 11019;11020;11021;11022 11021 223 VSGDDFSVPSK 11 1 0 Phospho (STY) _VS(ph)GDDFSVPSK_ VS(0.993)GDDFS(0.007)VPSK VS(21.39)GDDFS(-21.39)VPS(-49.24)K 0 0 1 0 B4DZG2;A0A024R8C1;Q15361 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 613.2651 2 609.257926 1216.5013 77918.73 0.95921 0.00058441 0.22721 0.00013843 1.1864 0.00072284 609.25794527621 613.265175318615 69.768 1.6511 69.768 69.008 70.659 0 778 141 8 0 0 0 0.0088889 3 44125 56.139 50.271 3 1.6228 1.0707 0 62075000 24116000 37959000 6715 150 3429 3824 11023;11024;11025 11025 223 VSHSPALSSDVR 12 0 1 Phospho (STY) _VS(ph)HSPALSSDVR_ VS(0.571)HS(0.429)PALSSDVR VS(1.24)HS(-1.24)PALS(-41.92)S(-47.29)DVR 0 0 1 0 Q8NBP1;F8W108;F8WCU9;Q68CP9;F8VWP4 Q8NBP1 Q8NBP1 ARID2 AT-rich interactive domain-containing protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 445.5416 3 445.541525 1333.60274 90463.32 0.12028 5.3592E-05 0.15957 7.1094E-05 0.27985 0.00012469 445.541494601182 448.877648107526 59.842 0.72781 59.842 59.484 60.211 3.8147E-06 276 52 9 0 0 0 0.0026533 1 26892 64.499 46.834 4 0.72924 0.92084 0 105110000 63764000 41346000 6716 831 3430 3825 11026 11026 1436;1437 VSHSPALSSDVR 12 0 1 Phospho (STY) _VSHS(ph)PALSSDVR_ VSHS(1)PALSSDVR VS(-50.1)HS(50.1)PALS(-64.22)S(-64.22)DVR 0 0 1 0 Q8NBP1;F8W108;F8WCU9;Q68CP9;F8VWP4 Q8NBP1 Q8NBP1 ARID2 AT-rich interactive domain-containing protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 667.8098 2 667.808649 1333.60274 74649.88 0.8026 0.00053598 -0.33516 -0.00022382 0.46744 0.00031216 667.808610394567 672.812681614672 59.853 0.58555 59.853 59.61 60.196 0 154 41 5 0 0 0 7.9485E-16 2 26914 122.39 109.76 4 0.82198 1.0255 0 38391000 23398000 14993000 6717 831 3430 3825 11027;11028 11027 1436;1437 VSHSPALSSDVR 12 0 1 Phospho (STY) _VSHS(ph)PALSSDVR_ VS(0.007)HS(0.99)PALS(0.002)S(0.002)DVR VS(-21.76)HS(21.76)PALS(-27.22)S(-27.22)DVR 0 0 1 0 Q8NBP1;F8W108;F8WCU9;Q68CP9;F8VWP4 Q8NBP1 Q8NBP1 ARID2 AT-rich interactive domain-containing protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 667.8096 2 667.808649 1333.60274 74764.05 0.97087 0.00064835 0.20452 0.00013658 1.1754 0.00078493 667.80854218248 672.812883108513 30.961 0.60283 30.961 30.659 31.262 0 217 43 8 0 0 0 0.010091 1 16235 48.467 39.604 4 1.7108 1.1949 0 36604000 14325000 22280000 6718 831 3430 3825 11029 11029 1436;1437 VSLEPHQGPGTPESK 15 1 0 Phospho (STY) _VSLEPHQGPGT(ph)PESK_ VS(0.009)LEPHQGPGT(0.975)PES(0.016)K VS(-20.45)LEPHQGPGT(17.77)PES(-17.77)K 0 0 1 0 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q96HN5;H0YFY6;Q7Z757;Q59HB8;Q9UNL7 A0A087WY61 A0A087WY61 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 821.8781 2 821.877259 1641.73997 70980.38 0.92199 0.00075776 -0.22875 -0.00018801 0.69324 0.00056976 821.877059645611 825.884736967791 60.33 0.47509 60.33 60.101 60.576 0 87 31 5 0 0 0 0.013774 1 27307 43.592 37.621 3 0.50282 0.59635 0 8708500 5745200 2963300 6719 110 3431 3826 11030 11030 147;2637 VSLLGPVTTPEHQLLK 16 1 0 Phospho (STY) _VSLLGPVTT(ph)PEHQLLK_ VSLLGPVT(0.138)T(0.862)PEHQLLK VS(-36.07)LLGPVT(-7.95)T(7.95)PEHQLLK 0 0 1 0 Q9H9L9;B2RE34;A0A024R136;Q9H0H5 Q9H9L9 Q9H9L9 RACGAP1 Rac GTPase-activating protein 1 MULTI-SECPEP 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 607.6666 3 604.66041 1810.9594 79389.73 1.0862 0.00065679 -0.025281 -1.5286E-05 1.0609 0.0006415 604.660391785802 607.33170475244 120.83 0.48825 120.83 120.53 121.02 0 89 43 4 0 0 0 0.0029603 1 78012 43.696 43.696 3 2.4 1.8563 0 7379600 1733000 5646600 6720 37 3432 3827 11031 11031 2617 VSPASSVDSNIPSSQGYK 18 1 0 Phospho (STY) _VS(ph)PASSVDSNIPSSQGYK_ VS(0.971)PAS(0.025)S(0.005)VDSNIPSSQGYK VS(15.97)PAS(-15.97)S(-23.29)VDS(-35.84)NIPS(-43.38)S(-43.38)QGY(-43.38)K 0 0 1 0 Q9UHB7 Q9UHB7 Q9UHB7 AFF4 AF4/FMR2 family member 4 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 955.9359 2 951.927678 1901.8408 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.721 1 75.721 75.221 76.221 0 0 0 0 0.0028045 1 39058 43.382 29.955 7 6721 1228 3433 3828 11032 11032 2504 VSPENLVDK 9 1 0 Phospho (STY) _VS(ph)PENLVDK_ VS(1)PENLVDK VS(55.4)PENLVDK 0 0 1 0 J3KS29;J3QKP0;Q86YY2;Q86YY1;B4DJ25;Q9NSZ0;B4DZ48;E7EVK1;Q7Z516;A0A088AWL3;A0A024RD47;O75376 J3KS29 J3KS29 NCOR1;DKFZp434M075 Nuclear receptor corepressor 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 544.7592 2 540.752279 1079.49001 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.123 1 71.123 70.623 71.623 0 0 0 0 0.0049082 1 35663 55.401 33.937 1 6722 222 3434 3829 11033 11033 349 VSPENLVDK 9 1 0 Phospho (STY) _VS(ph)PENLVDK_ VS(1)PENLVDK VS(50.35)PENLVDK 0 0 1 0 J3KS29;J3QKP0;Q86YY2;Q86YY1;B4DJ25;Q9NSZ0;B4DZ48;E7EVK1;Q7Z516;A0A088AWL3;A0A024RD47;O75376 J3KS29 J3KS29 NCOR1;DKFZp434M075 Nuclear receptor corepressor 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 540.7521 2 540.752279 1079.49001 NaN NaN NaN NaN NaN NaN NaN NaN NaN 71.736 1 71.736 71.236 72.236 0 0 0 0 0.0086771 1 36097 50.354 23.025 1 6723 222 3434 3829 11034 11034 349 VSPSFSAELK 10 1 0 Phospho (STY) _VS(ph)PSFSAELK_ VS(0.997)PS(0.002)FSAELK VS(26.67)PS(-26.67)FS(-34.11)AELK 0 0 1 0 B4DYU9;A0A024R411;Q13416 B4DYU9 B4DYU9 ORC2L;ORC2 Origin recognition complex subunit 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 576.7748 2 572.767929 1143.52131 81131.63 0.7514 0.00043038 0.11092 6.3532E-05 0.86232 0.00049391 572.767966162951 576.775037790687 90.38 1.0401 90.38 89.964 91.004 0 373 98 6 0 0 0 0.013143 2 58039 49.448 18.131 3 1.1309 0.8775 0 15424000 7342000 8082500 6724 84 3435 3830 11035;11036 11035 112 VSPSTSYTPSR 11 0 1 Phospho (STY) _VS(ph)PSTSYTPSR_ VS(0.995)PS(0.004)T(0.001)SYTPSR VS(23.94)PS(-23.94)T(-30.96)S(-37.5)Y(-43.62)T(-46.82)PS(-51.27)R 0 0 1 0 A0A0S2Z5P5;Q9BTE3 A0A0S2Z5P5 A0A0S2Z5P5 MCMBP Mini-chromosome maintenance complex-binding protein ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 631.2759 2 631.27665 1260.53875 NaN NaN NaN 0.59876 0.00037798 NaN NaN NaN NaN 46.395 0.82869 46.395 45.943 46.772 0 0 0 0 0.01148 1 17475 51.268 39.777 7 NaN NaN 0 4155200 4155200 0 6725 362 3436 3831 11037 11037 567 VSRSSFSSDPDESEGIPLK 19 1 1 3 Phospho (STY) _VSRS(ph)SFS(ph)S(ph)DPDESEGIPLK_ VS(0.37)RS(0.648)S(0.63)FS(0.671)S(0.671)DPDES(0.01)EGIPLK VS(-4.7)RS(0.43)S(-0.43)FS(1.43)S(1.43)DPDES(-20.81)EGIPLK 0 0 3 1 Q70L73 Q70L73 Q70L73 MKI67 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1139.4435 2 1138.94169 2275.86882 57925.83 0.58194 0.0006628 -0.44904 -0.00051142 0.13291 0.00015137 1138.9398420863 1147.95293641323 95.629 1.094 95.629 95.146 96.24 -7.6294E-06 397 98 7 0 0 0 2.9395E-05 1 53775 44.816 32.456 20 1.855 2.2102 0 84643000 28231000 56412000 6726 1130 3437 3832 11038 11038 2160;2161;2162;2163 VSRSSFSSDPDESEGIPLK 19 1 1 3 Phospho (STY) _VSRSS(ph)FS(ph)S(ph)DPDESEGIPLK_ VS(0.096)RS(0.46)S(0.514)FS(0.961)S(0.96)DPDES(0.009)EGIPLK VS(-7.89)RS(-0.55)S(0.55)FS(13.03)S(13.07)DPDES(-23.16)EGIPLK 0 0 3 1 Q70L73 Q70L73 Q70L73 MKI67 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1138.942 2 1138.94169 2275.86882 NaN NaN NaN 0.62728 0.00071443 NaN NaN NaN NaN 95.48 0.40925 95.48 95.175 95.584 0 0 0 0 0.00015641 1 53662 47.754 25.556 20 NaN NaN 0 20898000 20898000 0 6727 1130 3437 3832 11039 11039 2160;2161;2162;2163 VSSPLPSPSAMTDAANSQAAAK 22 1 0 Oxidation (M),Phospho (STY) _VSS(ph)PLPSPSAM(ox)TDAANSQAAAK_ VSSPLPSPSAM(1)TDAANSQAAAK VS(0.186)S(0.814)PLPSPSAMTDAANSQAAAK VSSPLPSPSAM(89.01)TDAANSQAAAK VS(-6.4)S(6.4)PLPS(-41.37)PS(-52.02)AMT(-61.98)DAANS(-80.8)QAAAK 0 1 1 0 A0A0U1RRM1;B3KSZ4;Q8WXI9;A0A0U1RR30 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1099.4946 2 1098.99577 2195.97698 58118.51 0.27091 0.00029773 -0.3344 -0.0003675 -0.06349 -6.9775E-05 1099.49635122587 1103.00315504261 65.845 0.83844 65.845 65.39 66.229 0 390 64 8 0 0 0 3.6244E-19 1 32018 89.011 89.011 6 1.059 1.3177 0 78034000 38842000 39192000 6728 369 3438 3833 11040 11040 88 589;590 VSSPLPSPSAMTDAANSQAAAK 22 1 0 Oxidation (M),Phospho (STY) _VSS(ph)PLPSPSAM(ox)TDAANSQAAAK_ VSSPLPSPSAM(1)TDAANSQAAAK VS(0.054)S(0.944)PLPS(0.002)PSAMTDAANSQAAAK VSSPLPSPSAM(53.03)TDAANSQAAAK VS(-12.41)S(12.41)PLPS(-27.41)PS(-35.89)AMT(-43.08)DAANS(-50.07)QAAAK 0 1 1 0 A0A0U1RRM1;B3KSZ4;Q8WXI9;A0A0U1RR30 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1103.5067 2 1098.99577 2195.97698 56813.22 0.75803 0.00083307 0.86013 0.00094528 1.6182 0.0017784 1098.99719046489 1103.00479583691 66.07 1.3528 66.07 65.449 66.802 0 756 121 8 0 0 0 2.4102E-07 1 41155 53.033 43.976 6 1.5351 1.0022 0 45457000 18879000 26578000 6729 369 3438 3833 11041 11041 88 589;590 VSSPLPSPSAMTDAANSQAAAK 22 1 0 Oxidation (M),2 Phospho (STY) _VSS(ph)PLPS(ph)PSAM(ox)TDAANSQAAAK_ VSSPLPSPSAM(1)TDAANSQAAAK VS(0.465)S(0.535)PLPS(0.942)PS(0.049)AMT(0.007)DAANS(0.002)QAAAK VSSPLPSPSAM(68.49)TDAANSQAAAK VS(-0.62)S(0.62)PLPS(12.9)PS(-12.9)AMT(-21.51)DAANS(-28.11)QAAAK 0 1 2 0 A0A0U1RRM1;B3KSZ4;Q8WXI9;A0A0U1RR30 A0A0U1RRM1 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1139.4792 2 1138.97893 2275.94331 57337.91 0.26276 0.00029927 -0.12387 -0.00014109 0.13889 0.00015819 1138.97895221148 1142.98612620509 67.727 0.8021 67.727 67.325 68.127 0 496 67 10 0 0 0 7.667E-13 3 33128 68.49 63.225 15 0.89296 1.1062 0 146040000 78393000 67649000 6730 369 3438 3834 11042;11043;11044 11043 88 589;590 VSTPSDYTLSFLK 13 1 0 Phospho (STY) _VST(ph)PSDYTLSFLK_ VS(0.477)T(0.523)PSDYTLSFLK VS(-0.4)T(0.4)PS(-36.65)DY(-65.34)T(-58.44)LS(-71.33)FLK 0 0 1 0 Q9UE24;E7EN32;A0A024R570;A0A024R5E3;A0A024R5D2;O00255 Q9UE24 Q9UE24 MEN1 Menin MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 773.3721 2 769.362922 1536.71129 70713.63 0.77672 0.00059758 0.03236 2.4897E-05 0.80908 0.00062247 769.362820556291 773.370124713312 123.04 0.60298 123.04 122.68 123.28 -7.6294E-06 233 53 6 0 0 0 7.915E-06 2 74319 97.86 78.098 6 0.69507 0.82574 0 11397000 6739700 4656900 6731 104 3439 3835 11045;11046 11046 2635 VTAIHIDPATHR 12 0 1 Unmodified _VTAIHIDPATHR_ 0 0 0 0 A0A0U1RQF0;P49327 A0A0U1RQF0 A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 335.9383 4 333.43611 1329.71533 103157.5 0.0038288 1.2767E-06 -0.14425 -4.8097E-05 -0.14042 -4.682E-05 333.436003187022 335.938223838494 105.74 0.76679 105.74 105.44 106.21 7.6294E-06 111 51 4 0 0 0 0.0084477 2 61549 35.204 24.594 1 1.5034 1.7377 0 12341000 6282100 6059100 6732 365 3440 3836 11047;11048 11048 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 0 A3KPC7;A0A024RAS2;Q08AJ9;B2R5B3;A4FTV9;A0A024R017;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q93077;Q7L7L0;Q6FI13;P20671;P0C0S8;P04908;H0YFX9;B4E0B3 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AB;HIST1H2AK;HIST1H2AC;HIST1H2AJ;HIST2H2AC;HIST3H2A;HIST2H2AA3;HIST1H2AD;HIST1H2AG Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 970.0964 2 966.088043 1930.16153 60362.55 0.95085 0.0009186 0.081872 7.9095E-05 1.0327 0.0009977 966.589493206281 970.596602988956 133.56 0.17265 133.56 133.47 133.64 0 24 5 8 0 0 0 1.2842E-98 2 81385 182.72 182.72 1 0.67522 0.83606 0 181670000 105330000 76345000 6733 22 3441 3837 11049;11050 11050 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 0 A3KPC7;A0A024RAS2;Q08AJ9;B2R5B3;A4FTV9;A0A024R017;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q93077;Q7L7L0;Q6FI13;P20671;P0C0S8;P04908;H0YFX9;B4E0B3 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AB;HIST1H2AK;HIST1H2AC;HIST1H2AJ;HIST2H2AC;HIST3H2A;HIST2H2AA3;HIST1H2AD;HIST1H2AG Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 970.5975 2 966.088043 1930.16153 60618.31 0.40989 0.00039599 -0.11541 -0.0001115 0.29448 0.00028449 966.589719796077 970.59689442454 145.27 0.058502 145.27 145.25 145.31 0 16 2 8 0 0 0 0.00033927 2 83673 45.915 45.915 1 0.69031 0.82927 0 15328000 8144300 7183600 6734 22 3441 3837 11051;11052 11052 VTIAQGGVLPNIQAVLLPK 19 1 0 Unmodified _VTIAQGGVLPNIQAVLLPK_ 0 0 0 0 A3KPC7;A0A024RAS2;Q08AJ9;B2R5B3;A4FTV9;A0A024R017;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q93077;Q7L7L0;Q6FI13;P20671;P0C0S8;P04908;H0YFX9;B4E0B3 A3KPC7 A3KPC7 HIST1H2AH;H2AFJ;HIST1H2AB;HIST1H2AK;HIST1H2AC;HIST1H2AJ;HIST2H2AC;HIST3H2A;HIST2H2AA3;HIST1H2AD;HIST1H2AG Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 966.5914 2 966.088043 1930.16153 59208.39 0.71614 0.00069185 0.12054 0.00011645 0.83667 0.0008083 966.589495497263 970.596447652203 134.79 0.29016 134.79 134.61 134.9 0 43 8 12 0 0 0 1.167E-210 2 87038 240.92 240.92 1 0.86261 0.57648 0 177770000 96814000 80956000 6735 22 3441 3837 11053;11054 11053 VTLYNTDQDGSDSPR 15 0 1 Phospho (STY) _VTLYNTDQDGS(ph)DSPR_ VTLYNT(0.008)DQDGS(0.496)DS(0.496)PR VT(-45.33)LY(-32.11)NT(-17.93)DQDGS(0)DS(0)PR 0 0 1 0 C9JXI1;C9JVP0;Q9UPW0 C9JXI1 C9JXI1 FOXJ3 Forkhead box protein J3 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 874.3631 2 874.36217 1746.70979 NaN NaN NaN NaN NaN NaN NaN NaN NaN 62.738 1 62.738 62.238 63.238 0 0 0 0 0.00051314 1 29379 51.771 35.633 5 6736 747 3442 3838 11055 11055 1258;1259 VTQHESDNENEIQIQNK 17 1 0 Phospho (STY) _VTQHES(ph)DNENEIQIQNK_ VT(0.213)QHES(0.787)DNENEIQIQNK VT(-5.67)QHES(5.67)DNENEIQIQNK 0 0 1 0 Q5VZL5 Q5VZL5 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 702.9771 3 702.642695 2104.90626 73147.58 0.84847 0.00059617 0.13986 9.8269E-05 0.98833 0.00069444 702.9771300483 705.314255204178 57.616 1.0342 57.616 57.103 58.137 -3.8147E-06 473 85 8 0 0 0 1.1815E-09 2 25129 83.063 73.967 2 0.55299 0.70169 0 38456000 22689000 15767000 6737 1114 3443 3839 11056;11057 11056 2110;2949 VTQHESDNENEIQIQNK 17 1 0 Phospho (STY) _VT(ph)QHESDNENEIQIQNK_ VT(0.587)QHES(0.413)DNENEIQIQNK VT(1.53)QHES(-1.53)DNENEIQIQNK 0 0 1 0 Q5VZL5 Q5VZL5 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1053.9618 2 1053.4604 2104.90626 60207.09 0.39997 0.00042135 0.7587 0.00079926 1.1587 0.0012206 1053.9625986285 1057.96946565202 57.57 0.76897 57.57 57.204 57.973 3.8147E-06 192 63 6 0 0 0 0.0021112 1 25216 45.077 30.516 2 0.55298 0.66612 0 16402000 10549000 5853000 6738 1114 3443 3839 11058 11058 2110;2949 VTQHESDNENEIQIQNK 17 1 0 Phospho (STY) _VTQHES(ph)DNENEIQIQNK_ VT(0.253)QHES(0.747)DNENEIQIQNK VT(-4.71)QHES(4.71)DNENEIQIQNK 0 0 1 0 Q5VZL5 Q5VZL5 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 702.9778 3 702.642695 2104.90626 70382.86 0.963 0.00067665 -0.4613 -0.00032413 0.50171 0.00035252 702.977086985593 705.314104013855 35.875 0.89317 35.875 35.43 36.323 0 418 72 10 0 0 0 5.1112E-07 1 20205 76.015 68.696 2 1.7733 1.178 0 84162000 31081000 53081000 6739 1114 3443 3839 11059 11059 2110;2949 VTSSITIYPSDSSSPR 16 0 1 Phospho (STY) _VTSSITIYPSDS(ph)SSPR_ VTS(0.003)S(0.001)ITIY(0.001)PS(0.1)DS(0.298)S(0.298)S(0.298)PR VT(-30.54)S(-19.58)S(-24.86)IT(-32.68)IY(-24.45)PS(-4.74)DS(0)S(0)S(0)PR 0 0 1 0 A0A024RAC0;Q86V48 A0A024RAC0 A0A024RAC0 LUZP1 Leucine zipper protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 893.9104 2 888.906214 1775.79787 65065.87 0.68039 0.0006048 0.16484 0.00014653 0.84523 0.00075133 888.906495708473 893.910528988467 88.477 1.1769 88.477 87.878 89.055 0 511 104 7 0 0 0 0.00012554 2 48684 56.514 39.055 9 2.6148 3.2996 0 71480000 23877000 47603000 6740 180 3444 3840 11060;11061 11061 286;287;288 VVDRDSEEAEIIR 13 0 2 Unmodified _VVDRDSEEAEIIR_ 0 0 0 1 B2R5W3;A0A024R3T8;P09874;B4E0E1 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 510.93 3 510.930126 1529.76855 NaN NaN NaN -0.45781 -0.00023391 NaN NaN NaN NaN 85.346 0.18182 85.346 85.226 85.408 0 0 0 0 1.1082E-09 1 46063 76.728 56.632 1 NaN NaN 0 7039700 7039700 0 6741 81 3445 3841 11062 11062 VVDRDSEEAEIIR 13 0 2 Unmodified _VVDRDSEEAEIIR_ 0 0 0 1 B2R5W3;A0A024R3T8;P09874;B4E0E1 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 517.6044 3 510.930126 1529.76855 NaN NaN NaN NaN NaN NaN NaN NaN NaN 84.639 1 84.639 84.139 85.139 0 0 0 0 0.010249 1 45589 38.977 20.381 1 6742 81 3445 3841 11063 11063 VVDRDSEEAEIIRK 14 1 2 Unmodified _VVDRDSEEAEIIRK_ 0 0 0 2 B2R5W3;A0A024R3T8;P09874 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 553.6301 3 553.628448 1657.86351 82480.45 1.0658 0.00059008 0.58719 0.00032508 1.653 0.00091516 553.628724850219 562.972144679569 93.508 0.69855 93.508 93.044 93.742 -7.6294E-06 217 56 6 0 0 0 0.00080982 1 51998 63.682 51.3 1 0.73822 0.84991 0 44765000 25609000 19156000 6743 81 3446 3842 11064 11064 VVDRDSEEAEIIRK 14 1 2 Unmodified _VVDRDSEEAEIIRK_ 0 0 0 2 B2R5W3;A0A024R3T8;P09874 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 415.7233 4 415.473155 1657.86351 92521.21 0.49942 0.0002075 0.36909 0.00015335 0.86851 0.00036084 415.473206030446 422.481103838207 93.506 1.1302 93.506 93.032 94.163 0 413 93 7 0 0 0 0.025204 1 51861 18.364 9.7654 1 0.61217 0.71813 0 129310000 75039000 54274000 6744 81 3446 3842 11065 11065 VVDYSQFQESDDADEDYGR 19 0 1 Phospho (STY) _VVDYSQFQES(ph)DDADEDYGR_ VVDY(0.001)S(0.001)QFQES(0.998)DDADEDYGR VVDY(-31.5)S(-30.61)QFQES(30.61)DDADEDY(-75.65)GR 0 0 1 0 Q9H1E3;B4DTY3;Q6IA16 Q9H1E3 Q9H1E3 NUCKS1;NUCKS Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1159.9443 2 1159.44207 2316.8696 56784.79 0.31542 0.00036572 0.14464 0.0001677 0.46006 0.00053341 1159.94346805431 1164.44667973516 81.361 0.931 81.361 80.905 81.836 7.6294E-06 346 84 5 0 0 0 6.1403E-22 4 43523 104.45 99.277 4 0.87109 1.0964 0 49716000 22212000 27504000 6745 1204 3447 3843 11066;11067;11068;11069 11068 2397 VVEAVNSDSDSEFGIPK 17 1 0 Phospho (STY) _VVEAVNS(ph)DSDSEFGIPK_ VVEAVNS(0.899)DS(0.097)DS(0.004)EFGIPK VVEAVNS(9.67)DS(-9.67)DS(-23.7)EFGIPK 0 0 1 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 936.9179 2 936.916778 1871.819 62431.66 1.7784 0.0016662 0.4765 0.00044644 2.2549 0.0021127 936.916877591544 940.923855386112 100.15 1.466 100.15 99.428 100.89 0 788 114 10 0 0 0 9.588E-37 3 57229 130.29 114.33 3 0.61506 0.76047 0 353780000 219430000 134360000 6746 1032 3448 3844 11070;11071;11072 11070 1869;1870;1871 VVEAVNSDSDSEFGIPK 17 1 0 Phospho (STY) _VVEAVNS(ph)DSDSEFGIPK_ VVEAVNS(0.843)DS(0.13)DS(0.027)EFGIPK VVEAVNS(8.11)DS(-8.11)DS(-14.97)EFGIPK 0 0 1 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 940.9244 2 936.916778 1871.819 62930.67 0.97839 0.00091667 0.21268 0.00019926 1.1911 0.0011159 936.917002804957 940.92414519155 106.19 1.8877 106.19 105.31 107.2 -7.6294E-06 1130 170 11 0 0 0 5.8711E-05 2 68119 59.261 59.261 3 0.87861 0.58701 0 211620000 113900000 97721000 6747 1032 3448 3844 11073;11074 11074 1869;1870;1871 VVEAVNSDSDSEFGIPK 17 1 0 2 Phospho (STY) _VVEAVNS(ph)DS(ph)DSEFGIPK_ VVEAVNS(1)DS(0.985)DS(0.015)EFGIPK VVEAVNS(37.79)DS(18.08)DS(-18.08)EFGIPK 0 0 2 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 980.9077 2 976.899944 1951.78533 61144.83 0.78615 0.00076799 -0.17309 -0.00016909 0.61306 0.0005989 976.900027219469 980.906895422743 108.03 2.2188 108.03 107.22 109.44 0 1289 173 12 0 0 0 2.1963E-30 5 63344 124.43 116.42 3 0.52561 0.64708 0 2539200000 1680300000 858850000 6748 1032 3448 3845 11075;11076;11077;11078;11079 11077 1869;1870;1871 VVEAVNSDSDSEFGIPK 17 1 0 2 Phospho (STY) _VVEAVNS(ph)DS(ph)DSEFGIPK_ VVEAVNS(0.998)DS(0.808)DS(0.194)EFGIPK VVEAVNS(26.12)DS(6.24)DS(-6.24)EFGIPK 0 0 2 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 976.9012 2 976.899944 1951.78533 61704.23 0.76456 0.0007469 0.16787 0.00016399 0.93243 0.00091089 976.900330322373 980.907194215013 117.48 2.7775 117.48 116.77 119.55 0 1687 254 13 0 0 0 1.3815E-09 3 75874 85.636 80.029 3 1.1466 0.76417 0 921810000 429350000 492450000 6749 1032 3448 3845 11080;11081;11082 11081 1869;1870;1871 VVEAVNSDSDSEFGIPK 17 1 0 3 Phospho (STY) _VVEAVNS(ph)DS(ph)DS(ph)EFGIPK_ VVEAVNS(1)DS(1)DS(1)EFGIPK VVEAVNS(56.36)DS(56.36)DS(56.36)EFGIPK 0 0 3 0 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1016.8829 2 1016.88311 2031.75166 60459.64 0.19416 0.00019744 0.39682 0.00040352 0.59098 0.00060096 1016.88362088538 1020.89064179954 114.85 1.0038 114.85 114.38 115.39 0 562 86 9 0 0 0 8.1842E-05 2 68707 56.359 49.386 1 0.51154 0.63558 0 93714000 59282000 34431000 6750 1032 3448 3846 11083;11084 11084 1869;1870;1871 VVEAVNSDSDSEFGIPKK 18 2 0 2 Phospho (STY) _VVEAVNS(ph)DS(ph)DSEFGIPKK_ VVEAVNS(0.943)DS(0.807)DS(0.25)EFGIPKK VVEAVNS(11.22)DS(5.89)DS(-5.89)EFGIPKK 0 0 2 1 Q71UH4;Q02880;Q59H80;B4DLV2;Q8WTY5 Q71UH4 Q71UH4 TOP2B DNA topoisomerase 2;DNA topoisomerase 2-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1041.4543 2 1040.94743 2079.8803 58720.57 0.9086 0.0009458 1.0003 0.0010412 1.9089 0.001987 1040.94852611311 1048.96294431388 89.879 1.5976 89.879 88.918 90.516 0 627 141 7 0 0 0 1.2792E-08 5 49004 79.393 73.207 3 0.53305 0.67556 0 68999000 46511000 22489000 6751 1032 3449 3847 11085;11086;11087;11088;11089 11085 1869;1870;1871 VVELSPLK 8 1 0 Phospho (STY) _VVELS(ph)PLK_ VVELS(1)PLK VVELS(54.07)PLK 0 0 1 0 A0A1C9J735;A0A1C9J732;Q8TEK3 A0A1C9J735 A0A1C9J735 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 482.759 2 482.759376 963.504199 NaN NaN NaN NaN NaN NaN NaN NaN NaN 91.153 1 91.153 90.653 91.653 0 0 0 0 0.0104 1 58748 54.066 6.4632 1 6752 389 3450 3848 11090 11090 661 VVESPDFSK 9 1 0 Phospho (STY) _VVES(ph)PDFSK_ VVES(0.911)PDFS(0.089)K VVES(10.12)PDFS(-10.12)K 0 0 1 0 B3KN10;B4DWG1;B3KM47;Q9Y6Y8 B3KN10 B3KN10 SEC23IP SEC23-interacting protein MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 548.2467 2 544.239005 1086.46346 NaN NaN NaN NaN NaN NaN NaN NaN NaN 55.349 1 55.349 54.849 55.849 3.8147E-06 0 0 0 0.022106 1 23671 40.727 11.771 2 6753 568 3451 3849 11091 11091 947 VVFRDPYR 8 0 2 Unmodified _VVFRDPYR_ 0 0 0 1 E9PKZ0;P62917;G3V1A1;B4DVG7;E9PKU4 E9PKZ0 E9PKZ0 RPL8 60S ribosomal protein L8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 351.1945 3 351.194298 1050.56106 100697.6 0.35822 0.00012581 0.47539 0.00016695 0.83361 0.00029276 351.194442031466 357.866533304134 97.044 1.6312 97.044 95.979 97.61 0 485 137 6 0 0 0 0.023465 1 54540 62.88 48.201 1 0.75136 0.93672 0 143950000 87359000 56587000 6754 811 3452 3850 11092 11092 VVIIQPHDDGSPR 13 0 1 Phospho (STY) _VVIIQPHDDGS(ph)PR_ VVIIQPHDDGS(1)PR VVIIQPHDDGS(41.4)PR 0 0 1 0 A7E2F9;Q9P2F8 A7E2F9 A7E2F9 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 761.9996 2 756.863955 1511.71336 NaN NaN NaN NaN NaN NaN NaN NaN NaN 72.924 1 72.924 72.424 73.424 0 0 0 0 0.010798 1 37045 41.401 25.829 1 6755 435 3453 3851 11093 11093 758 VVNANQNASPNVPGK 15 1 0 Phospho (STY) _VVNANQNAS(ph)PNVPGK_ VVNANQNAS(1)PNVPGK VVNANQNAS(111.64)PNVPGK 0 0 1 0 B9EGR5;Q8IWI9;Q9H6M4;H3BP52;H3BTF4 B9EGR5 B9EGR5 MGA MAX gene-associated protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 795.3799 2 794.877594 1587.74063 68941.3 0.9257 0.00073582 0.025721 2.0445E-05 0.95143 0.00075627 794.877506528523 798.884802338892 43.375 0.91996 43.375 42.912 43.832 0 371 66 7 0 0 0 7.2215E-18 1 15676 111.64 103.34 1 0.57584 0.68804 0 13322000 7992500 5329200 6756 732 3454 3852 11094 11094 1230 VVNANQNASPNVPGK 15 1 0 Phospho (STY) _VVNANQNAS(ph)PNVPGK_ VVNANQNAS(1)PNVPGK VVNANQNAS(116)PNVPGK 0 0 1 0 B9EGR5;Q8IWI9;Q9H6M4;H3BP52;H3BTF4 B9EGR5 B9EGR5 MGA MAX gene-associated protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 794.8777 2 794.877594 1587.74063 69699.35 1.209 0.00096102 0.31076 0.00024702 1.5198 0.001208 794.877387661704 798.88530512897 33.344 0.56625 33.344 33.074 33.641 0 228 42 8 0 0 0 3.2946E-18 1 18219 116 105.25 1 1.4329 0.99701 0 23506000 9608300 13897000 6757 732 3454 3852 11095 11095 1230 VVPQQITHTSPR 12 0 1 Phospho (STY) _VVPQQITHT(ph)SPR_ VVPQQIT(0.023)HT(0.488)S(0.488)PR VVPQQIT(-13.2)HT(0)S(0)PR 0 0 1 0 B3KRT9;Q96DP1;H7BXF5;Q9H0E3 B3KRT9 B3KRT9 SAP130 Histone deacetylase complex subunit SAP130 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 481.5783 3 481.576569 1441.70788 87109.03 0.38808 0.00018689 0.079292 3.8185E-05 0.46737 0.00022507 481.576659360251 485.247355134623 59.7 1.1187 59.7 59.158 60.277 0 368 85 7 0 0 0 0.0022838 1 26812 58.814 48.683 3 0.61226 0.77009 0 44887000 29256000 15631000 6758 594 3455 3853 11096 11096 977;2777 VVPQQITHTSPR 12 0 1 Phospho (STY) _VVPQQITHT(ph)SPR_ VVPQQIT(0.186)HT(0.407)S(0.407)PR VVPQQIT(-3.41)HT(0)S(0)PR 0 0 1 0 B3KRT9;Q96DP1;H7BXF5;Q9H0E3 B3KRT9 B3KRT9 SAP130 Histone deacetylase complex subunit SAP130 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 721.8649 2 721.861215 1441.70788 NaN NaN NaN 0.41578 0.00030013 NaN NaN NaN NaN 59.819 0.57102 59.819 59.464 60.035 0 0 0 0 0.01209 1 26798 52.891 37.002 3 NaN NaN 0 5252600 5252600 0 6759 594 3455 3853 11097 11097 977;2777 VVSEDFLQDVSASTK 15 1 0 Unmodified _VVSEDFLQDVSASTK_ 0 0 0 0 B2R5W3;A0A024R3T8;P09874;B4E0E1 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 813.4085 2 812.906867 1623.79918 NaN NaN NaN -0.37157 -0.00030205 NaN NaN NaN NaN 107.75 0.18745 107.75 107.64 107.83 0 0 0 0 0.00014024 1 63024 75.695 57.384 1 NaN NaN 0 4964000 4964000 0 6760 81 3456 3854 11098 11098 VVSEDFLQDVSASTK 15 1 0 Phospho (STY) _VVSEDFLQDVSAS(ph)TK_ VVSEDFLQDVS(0.279)AS(0.36)T(0.36)K VVS(-29.86)EDFLQDVS(-1.12)AS(0)T(0)K 0 0 1 0 B2R5W3;A0A024R3T8;P09874;B4E0E1 B2R5W3 B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 857.3979 2 852.890032 1703.76551 67016.8 1.2155 0.0010367 0.21392 0.00018245 1.4294 0.0012191 852.891163264255 856.89653241416 112.45 0.68816 112.45 112.12 112.81 0 193 68 5 0 0 0 0.0029714 1 72258 40.801 36.833 4 0.65409 0.48935 0 9709800 5940000 3769800 6761 81 3456 3855 11099 11099 107;2627 VVVDPVVTEQPSTSSAAK 18 1 0 Phospho (STY) _VVVDPVVTEQPS(ph)TSSAAK_ VVVDPVVTEQPS(0.547)T(0.286)S(0.083)S(0.083)AAK VVVDPVVT(-70.76)EQPS(2.81)T(-2.81)S(-8.17)S(-8.17)AAK 0 0 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 951.4717 2 947.463896 1892.91324 63509.16 0.72176 0.00068384 -0.12628 -0.00011965 0.59548 0.00056419 947.96521701186 951.470693954909 85.845 1.5243 85.845 84.983 86.508 0 976 146 10 0 0 0 2.8141E-62 4 46457 157.91 140.16 5 0.54545 0.67405 0 452270000 296730000 155540000 6762 1167 3457 3856 11100;11101;11102;11103 11103 2275;2276;2277;2970 VVVDPVVTEQPSTSSAAK 18 1 0 Phospho (STY) _VVVDPVVTEQPS(ph)TSSAAK_ VVVDPVVT(0.001)EQPS(0.25)T(0.25)S(0.25)S(0.25)AAK VVVDPVVT(-23.25)EQPS(0)T(0)S(0)S(0)AAK 0 0 1 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 951.4719 2 947.463896 1892.91324 62465.55 0.95226 0.00090223 0.20129 0.00019071 1.1535 0.0010929 947.463841878855 951.470937052211 89.047 1.3009 89.047 88.44 89.741 0 846 126 10 0 0 0 3.728E-13 2 57222 95.428 84.944 5 1.2116 0.80987 0 160300000 71600000 88695000 6763 1167 3457 3856 11104;11105 11104 2275;2276;2277;2970 VVVDPVVTEQPSTSSAAK 18 1 0 2 Phospho (STY) _VVVDPVVTEQPSTS(ph)S(ph)AAK_ VVVDPVVT(0.003)EQPS(0.099)T(0.472)S(0.558)S(0.868)AAK VVVDPVVT(-23.07)EQPS(-8.6)T(-0.97)S(0.97)S(6.76)AAK 0 0 2 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 987.4474 2 987.447061 1972.87957 62540.13 0.37258 0.0003679 0.28201 0.00027847 0.65459 0.00064637 987.948828969219 991.45442927213 91.793 1.0419 91.793 91.37 92.412 0 341 90 6 0 0 0 1.4269E-10 2 51006 84.508 84.508 10 0.39543 0.49606 0 57506000 43143000 14363000 6764 1167 3457 3857 11106;11107 11107 2275;2276;2277;2970 VVVDPVVTEQPSTSSAAK 18 1 0 2 Phospho (STY) _VVVDPVVTEQPS(ph)T(ph)SSAAK_ VVVDPVVT(0.062)EQPS(0.454)T(0.515)S(0.515)S(0.454)AAK VVVDPVVT(-10.56)EQPS(0)T(0)S(0)S(0)AAK 0 0 2 0 Q8WWQ0;Q9NWP3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 991.4542 2 987.447061 1972.87957 59740.07 0.61021 0.00060255 0.19544 0.00019298 0.80565 0.00079553 987.446614750158 991.454234019683 100.7 1.1708 100.7 100.15 101.32 7.6294E-06 431 109 6 0 0 0 6.6863E-08 1 64648 76.82 68.515 10 1.3228 0.85859 0 35865000 16542000 19323000 6765 1167 3457 3857 11108 11108 2275;2276;2277;2970 VYDPASPQR 9 0 1 Phospho (STY) _VYDPAS(ph)PQR_ VYDPAS(1)PQR VY(-38.82)DPAS(38.82)PQR 0 0 1 0 E9PS41;Q6RFH5 E9PS41 E9PS41 WDR74 WD repeat-containing protein 74 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 556.7422 2 556.742246 1111.46994 NaN NaN NaN 0.16215 9.0273E-05 NaN NaN NaN NaN 46.168 0.93964 46.168 45.637 46.577 0 0 0 0 0.027406 1 17224 42.395 23.65 2 NaN NaN 0 3089000 3089000 0 6766 816 3458 3858 11109 11109 1411 VYEDSGIPLPAESPK 15 1 0 Phospho (STY) _VYEDSGIPLPAES(ph)PK_ VYEDSGIPLPAES(1)PK VY(-69.39)EDS(-43)GIPLPAES(43)PK 0 0 1 0 F8W038;H0YIS7;Q8IXM2;F8W1H0 F8W038 F8W038 C17orf49;RNASEK-C17orf49;BAP18 Chromatin complexes subunit BAP18 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 841.3914 2 841.389668 1680.76478 66920.68 1.4351 0.0012075 0.21678 0.00018239 1.6519 0.0013899 841.38960467722 845.397104188394 101.87 0.65074 101.87 101.57 102.22 0 180 55 4 0 0 0 0.00011435 3 58515 72.34 65.899 3 0.8778 1.0557 0 15787000 7131600 8655500 6767 830 3459 3859 11110;11111;11112 11111 1434 VYEDSGIPLPAESPKK 16 2 0 Phospho (STY) _VYEDSGIPLPAES(ph)PKK_ VYEDS(0.001)GIPLPAES(0.999)PKK VY(-40.79)EDS(-31.08)GIPLPAES(31.08)PKK 0 0 1 1 F8W038;H0YIS7;Q8IXM2;F8W1H0 F8W038 F8W038 C17orf49;RNASEK-C17orf49;BAP18 Chromatin complexes subunit BAP18 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 905.9405 2 905.43715 1808.85975 NaN NaN NaN 0.045823 4.149E-05 NaN NaN NaN NaN 92.939 0.78003 92.939 92.459 93.239 0 0 0 0 0.00015666 1 51473 53.995 35.727 3 NaN NaN 0 15407000 15407000 0 6768 830 3460 3860 11113 11113 1434 VYEHTSRFSPK 11 1 1 Phospho (STY) _VYEHTS(ph)RFSPK_ VYEHT(0.028)S(0.486)RFS(0.486)PK VY(-71.51)EHT(-12.38)S(0)RFS(0)PK 0 0 1 1 A4LAA3;P46100;A0A096LNL9;A0A096LNW1;A0A068A230;A0A096LNN3 A4LAA3 A4LAA3 ATRX Transcriptional regulator ATRX MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 483.5616 3 477.553653 1429.63913 87355.77 0.24074 0.00011497 -0.14074 -6.7211E-05 0.099999 4.7755E-05 477.553551592366 483.561068236149 21.667 0.42616 21.667 21.497 21.923 0 109 20 8 0 0 0 0.00043249 2 8336 79.614 71.229 4 1.2003 0.92224 0 29759000 13818000 15942000 6769 422 3461 3861 11114;11115 11114 727;728 VYISSPHSSPAHNK 14 1 0 Phospho (STY) _VYISSPHS(ph)SPAHNK_ VYIS(0.054)S(0.042)PHS(0.512)S(0.392)PAHNK VY(-47.88)IS(-9.77)S(-10.86)PHS(1.16)S(-1.16)PAHNK 0 0 1 0 B2RCJ6;Q9BZH6 B2RCJ6 B2RCJ6 WDR11 WD repeat-containing protein 11 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 537.9188 3 535.247 1602.71917 82498.25 0.54013 0.0002891 -0.25745 -0.0001378 0.28268 0.0001513 535.247036940425 537.91757696921 21.104 0.42779 21.104 20.932 21.359 0 105 19 9 0 0 0 0.0012512 2 7876 53.773 34.715 5 0.84016 0.65356 0 14724000 7454500 7269900 6770 554 3462 3862 11116;11117 11117 919 VYLSDSDNNSLETGEILK 18 1 0 Phospho (STY) _VYLS(ph)DSDNNSLETGEILK_ VY(0.008)LS(0.792)DS(0.199)DNNS(0.001)LETGEILK VY(-19.86)LS(6)DS(-6)DNNS(-27.63)LET(-49.53)GEILK 0 0 1 0 Q9NSI6 Q9NSI6 Q9NSI6 BRWD1 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1042.9795 2 1038.97228 2075.93001 59410.93 0.66698 0.00069297 0.31404 0.00032628 0.98102 0.0010193 1039.47391373895 1043.48265350027 110.96 0.52899 110.96 110.69 111.22 0 190 46 6 0 0 0 4.3005E-08 4 65619 79.466 68.253 5 0.7884 0.99593 0 31070000 17326000 13744000 6771 1218 3463 3863 11118;11119;11120;11121 11121 2462;2463 VYLSDSDNNSLETGEILK 18 1 0 2 Phospho (STY) _VYLS(ph)DS(ph)DNNSLETGEILK_ VY(0.027)LS(0.954)DS(0.954)DNNS(0.06)LET(0.005)GEILK VY(-18.38)LS(14.99)DS(14.99)DNNS(-14.99)LET(-27.87)GEILK 0 0 2 0 Q9NSI6 Q9NSI6 Q9NSI6 BRWD1 Bromodomain and WD repeat-containing protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1079.4595 2 1078.95545 2155.89634 59455.62 0.37435 0.00040391 -0.02475 -2.6704E-05 0.3496 0.00037721 1079.45720607387 1082.96214045798 119.17 0.94405 119.17 118.78 119.73 7.6294E-06 503 84 8 0 0 0 4.8489E-06 1 71374 57.802 42.926 10 0.73137 0.90945 0 84611000 49185000 35426000 6772 1218 3463 3864 11122 11122 2462;2463 VYNVTQHAVGIVVNK 15 1 0 Unmodified _VYNVTQHAVGIVVNK_ 0 0 0 0 G3V1B3;M0R181;Q6IAX2;Q59GK9;P46778 G3V1B3 G3V1B3 RPL21 60S ribosomal protein L21 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 550.6484 3 547.64214 1639.90459 82056.59 0.71218 0.00039002 -0.18787 -0.00010289 0.52431 0.00028713 547.976299339106 550.313491056788 104.64 0.75079 104.64 104.19 104.94 -7.6294E-06 205 53 5 0 0 0 3.9918E-09 2 60458 97.86 97.86 1 0.95711 1.1751 0 21649000 12755000 8894400 6773 837 3464 3865 11123;11124 11123 VYNVTQHAVGIVVNK 15 1 0 Unmodified _VYNVTQHAVGIVVNK_ 0 0 0 0 G3V1B3;M0R181;Q6IAX2;Q59GK9;P46778 G3V1B3 G3V1B3 RPL21 60S ribosomal protein L21 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 824.967 2 820.959571 1639.90459 NaN NaN NaN NaN NaN NaN NaN NaN NaN 104.64 1 104.64 104.14 105.14 -7.6294E-06 0 0 0 0.00020729 1 60602 57.164 39.062 1 6774 837 3464 3865 11125 11125 VYNVTQHAVGIVVNK 15 1 0 Unmodified _VYNVTQHAVGIVVNK_ 0 0 0 0 G3V1B3;M0R181;Q6IAX2;Q59GK9;P46778 G3V1B3 G3V1B3 RPL21 60S ribosomal protein L21 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 547.6428 3 547.64214 1639.90459 83028.49 0.77336 0.00042353 -0.07494 -4.104E-05 0.69842 0.00038249 547.642148080256 550.313523573687 85.633 0.54597 85.633 85.422 85.968 7.6294E-06 108 49 5 0 0 0 0.0098639 1 54953 27.734 25.664 1 0.66111 0.5386 0 6063900 2899200 3164600 6775 837 3464 3865 11126 11126 VYVGNLGNNGNK 12 1 0 Unmodified _VYVGNLGNNGNK_ 0 0 0 0 A0A087X2D0;B2R6F3;P84103 A0A087X2D0 A0A087X2D0 SRSF3;SFRS3 Serine/arginine-rich splicing factor 3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 628.827 2 624.820201 1247.62585 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.767 1 64.767 64.267 65.267 0 0 0 0 0.00020923 1 30939 67.897 50.657 1 6776 276 3465 3866 11127 11127 VYVGNLGNNGNK 12 1 0 Unmodified _VYVGNLGNNGNK_ 0 0 0 0 A0A087X2D0;B2R6F3;P84103 A0A087X2D0 A0A087X2D0 SRSF3;SFRS3 Serine/arginine-rich splicing factor 3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 628.8276 2 624.820201 1247.62585 NaN NaN NaN NaN NaN NaN NaN NaN NaN 64.795 1 64.795 64.295 65.295 0 0 0 0 0.0058078 1 30963 91.318 70.416 1 6777 276 3465 3866 11128 11128 VYVGNLGNNGNK 12 1 0 Unmodified _VYVGNLGNNGNK_ 0 0 0 0 A0A087X2D0;B2R6F3;P84103 A0A087X2D0 A0A087X2D0 SRSF3;SFRS3 Serine/arginine-rich splicing factor 3 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 624.8209 2 624.820201 1247.62585 NaN NaN NaN NaN NaN NaN NaN NaN NaN 38.06 1 38.06 37.56 38.56 0 0 0 0 0.0062293 1 21806 48.796 19.709 1 6778 276 3465 3866 11129 11129 WELLQQVDTSTR 12 0 1 Unmodified _WELLQQVDTSTR_ 0 0 0 0 H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRG2 H6VRG3;H6VRG2 H6VRG2 KRT1 Keratin, type II cytoskeletal 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 738.3845 2 738.37808 1474.74161 NaN NaN NaN 1.3074 0.00096534 NaN NaN NaN NaN 108.66 0.43938 108.66 108.37 108.81 0 0 0 0 2.9265E-10 1 63574 103.22 78.366 1 NaN NaN 0 6437900 6437900 0 + 6779 876;877 3466 3867 11130 11130 WGQPPSPTPVPRPPDADPNTPSPK 24 1 1 Phospho (STY) _WGQPPS(ph)PTPVPRPPDADPNTPSPK_ WGQPPS(0.815)PT(0.18)PVPRPPDADPNT(0.004)PS(0.002)PK WGQPPS(6.57)PT(-6.57)PVPRPPDADPNT(-23.06)PS(-27.31)PK 0 0 1 1 B3KY63;F5GWX5;A0A0C4DGG9;Q14839 B3KY63 B3KY63 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 873.0828 3 872.414515 2614.22172 65647.57 1.1489 0.0010024 -0.18155 -0.00015838 0.9674 0.00084397 872.748507030515 878.756161044707 92.845 1.0605 92.845 92.308 93.368 0 570 90 9 0 0 0 9.192E-09 3 51316 53.262 46.558 4 0.78826 0.93874 0 81340000 45885000 35455000 6780 324 3467 3868 11131;11132;11133 11131 512;513;2690 WGQPPSPTPVPRPPDADPNTPSPK 24 1 1 2 Phospho (STY) _WGQPPS(ph)PTPVPRPPDADPNTPS(ph)PK_ WGQPPS(0.705)PT(0.294)PVPRPPDADPNT(0.103)PS(0.898)PK WGQPPS(3.82)PT(-3.82)PVPRPPDADPNT(-9.51)PS(9.51)PK 0 0 2 1 B3KY63;F5GWX5;A0A0C4DGG9;Q14839 B3KY63 B3KY63 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 905.7464 3 899.069959 2694.18805 64007.45 1.2036 0.0010821 0.12384 0.00011134 1.3275 0.0011935 899.404195549776 905.077484730433 95.881 1.1566 95.881 95.423 96.58 0 643 102 8 0 0 0 1.0657E-07 2 53818 47.395 36.879 6 0.78727 0.9395 0 95395000 56615000 38780000 6781 324 3467 3869 11134;11135 11134 512;513;2690 WGQPPSPTPVPRPPDADPNTPSPK 24 1 1 3 Phospho (STY) _WGQPPS(ph)PTPVPRPPDADPNT(ph)PS(ph)PK_ WGQPPS(0.992)PT(0.045)PVPRPPDADPNT(0.975)PS(0.989)PK WGQPPS(20.61)PT(-15.74)PVPRPPDADPNT(15.74)PS(19.43)PK 0 0 3 1 B3KY63;F5GWX5;A0A0C4DGG9;Q14839 B3KY63 B3KY63 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 926.0612 3 925.725402 2774.15438 62927.32 1.6882 0.0015628 0.1845 0.0001708 1.8727 0.0017336 926.059978446207 932.067267407234 100.13 1.0859 100.13 99.608 100.69 0 706 85 11 0 0 0 1.3764E-09 1 57071 54.255 44.793 4 0.61714 0.74577 0 249920000 136930000 113000000 6782 324 3467 3870 11136 11136 512;513;2690 WLDESDAEMELR 12 0 1 Oxidation (M),Phospho (STY) _WLDES(ph)DAEM(ox)ELR_ WLDESDAEM(1)ELR WLDES(1)DAEMELR WLDESDAEM(96.76)ELR WLDES(96.76)DAEMELR 0 1 1 0 H3BPZ1;H3BS72;Q9P035 H3BPZ1 H3BPZ1 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 795.3139 2 795.313103 1588.61165 69528.26 1.5862 0.0012616 0.033992 2.7034E-05 1.6202 0.0012886 795.313545684722 800.317168854134 102.35 0.83067 102.35 101.87 102.7 0 260 64 6 0 0 0 3.7778E-06 2 59124 96.756 85.926 1 0.6983 0.82894 0 15218000 8834100 6384400 6783 869 3468 3871 11137;11138 11138 234 1479 WLDESDAEMELR 12 0 1 Oxidation (M),Phospho (STY) _WLDES(ph)DAEM(ox)ELR_ WLDESDAEM(1)ELR WLDES(1)DAEMELR WLDESDAEM(126.1)ELR WLDES(126.1)DAEMELR 0 1 1 0 H3BPZ1;H3BS72;Q9P035 H3BPZ1 H3BPZ1 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 800.3187 2 795.313103 1588.61165 69865.13 1.4205 0.0011298 0.4452 0.00035407 1.8657 0.0014839 795.313139765069 800.317820035651 103.06 0.97125 103.06 102.51 103.48 0 258 67 6 0 0 0 3.094E-16 2 59300 126.1 114.66 1 0.74238 0.89934 0 19757000 10522000 9235100 6784 869 3468 3871 11139;11140 11139 234 1479 WLDESDAEMELR 12 0 1 Oxidation (M),Phospho (STY) _WLDES(ph)DAEM(ox)ELR_ WLDESDAEM(1)ELR WLDES(1)DAEMELR WLDESDAEM(45.79)ELR WLDES(45.79)DAEMELR 0 1 1 0 H3BPZ1;H3BS72;Q9P035 H3BPZ1 H3BPZ1 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 795.3137 2 795.313103 1588.61165 69650.2 1.296 0.0010307 -0.3983 -0.00031678 0.89772 0.00071397 795.31276477672 800.317221184353 108.81 0.6732 108.81 108.54 109.21 0 265 66 5 0 0 0 0.0096104 1 69919 45.79 38.141 1 0.46292 0.36838 0 12915000 8592800 4322200 6785 869 3468 3871 11141 11141 234 1479 WQDIQNDPR 9 0 1 Unmodified _WQDIQNDPR_ 0 0 0 0 B3KY63;F5GWX5;A0A0C4DGG9;Q14839;Q6ZU36;Q8TDI0 B3KY63 B3KY63 CHD4;CHD5 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 5 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 586.2794 2 586.278169 1170.54179 NaN NaN NaN NaN NaN NaN NaN NaN NaN 59.763 1 59.763 59.263 60.263 -3.8147E-06 0 0 0 0.0067881 1 26917 60.91 32.702 1 6786 324 3469 3872 11142 11142 YCYYNETHK 9 1 0 Unmodified _YCYYNETHK_ 0 0 0 0 Q05CW7;E9PMU0;E9PJN6;Q9H0A0 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 426.7408 3 426.513367 1276.51827 92620.52 -0.20333 -8.6721E-05 -0.31573 -0.00013466 -0.51905 -0.00022138 426.513277168602 429.184400948257 66.575 0.32739 66.575 66.345 66.673 0 68 21 5 0 0 0 0.021683 1 32432 43.635 37.332 1 0.98935 1.2268 0 24411000 12761000 11650000 6787 1202;1038 3470 3873 11143 11143 YDAGEHGLQEAEK 13 1 0 Unmodified _YDAGEHGLQEAEK_ 0 0 0 0 F5H2X1;B7Z842;B7Z7T5;H3BND8;B7Z855;B7ZAX6;Q6U8A4;Q93009 F5H2X1 F5H2X1 USP7 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 724.3314 2 723.82842 1445.64229 72117.17 0.55822 0.00040405 1.2954 0.00093763 1.8536 0.0013417 724.330240911507 727.83548646923 66.598 0.25729 66.598 66.484 66.741 0 75 16 6 0 0 0 0.00030845 1 32478 86.772 58.195 1 0.52816 0.66494 0 29393000 18445000 10948000 6788 714 3471 3874 11144 11144 YDEIRR 6 0 2 Unmodified _YDEIRR_ 0 0 0 1 P62424;Q9BY74;Q5T8U2 P62424 P62424 RPL7A;RP-L7a 60S ribosomal protein L7a MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 426.2221 2 426.222134 850.429715 92347.37 -0.10914 -4.652E-05 0.13428 5.7231E-05 0.025131 1.0711E-05 426.222097462366 436.230372539721 65.827 0.43427 65.827 65.664 66.099 0 113 33 5 0 0 0 0.021976 1 31791 105.27 40.492 1 0.74486 0.92748 0 106920000 59182000 47743000 6789 1019 3472 3875 11145 11145 YDERPGPSPLPHR 13 0 2 Phospho (STY) _YDERPGPS(ph)PLPHR_ Y(0.002)DERPGPS(0.998)PLPHR Y(-28.18)DERPGPS(28.18)PLPHR 0 0 1 1 A8KAQ5;A0A024QZD5;P08621 A8KAQ5 A8KAQ5 SNRP70;SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 541.2543 3 534.247112 1599.71951 NaN NaN NaN 0.064161 3.4278E-05 NaN NaN NaN NaN 72.935 0.17065 72.935 72.843 73.014 0 0 0 0 0.0045709 1 37096 40.237 29.579 2 NaN NaN 0 5777600 0 5777600 6790 14 3473 3876 11146 11146 16 YEDEINKR 8 1 1 Unmodified _YEDEINKR_ 0 0 0 1 CON__P05787;P05787;Q969I0;F8VUG2;CON__H-INV:HIT000016045;F8VP67;F8W0C6;CON__Q6IFZ6;Q147W7;Q0IIN1;CON__Q7Z794;CON__P12035;CON__Q01546;Q7Z794;P12035;Q01546;F8W1U3;H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;CON__P04264;CON__ENSEMBL:ENSBTAP00000038253;H6VRG2;B4DL32;CON__Q8VED5;B4E1T1;CON__P13647;P13647;CON__P35908;P35908 CON__P05787;F8W1U3;H6VRG3;H6VRG2;CON__P35908 H6VRG2 KRT8;KRT5;KRT1B;KRT77;KRT3;KRT76;KRT1;KRT2 Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 1b;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 533.7619 2 533.76182 1065.50909 NaN NaN NaN -0.55739 -0.00029751 NaN NaN NaN NaN 62.464 1.2046 62.464 62.144 63.349 0 0 0 0 3.1552E-10 2 29618 97.798 46.832 1 NaN NaN 0 29837000 29837000 0 + 6791 876;877;754;758;832 3474 3877 11147;11148 11148 YEDEINKR 8 1 1 Unmodified _YEDEINKR_ 0 0 0 1 CON__P05787;P05787;Q969I0;F8VUG2;CON__H-INV:HIT000016045;F8VP67;F8W0C6;CON__Q6IFZ6;Q147W7;Q0IIN1;CON__Q7Z794;CON__P12035;CON__Q01546;Q7Z794;P12035;Q01546;F8W1U3;H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;CON__P04264;CON__ENSEMBL:ENSBTAP00000038253;H6VRG2;B4DL32;CON__Q8VED5;B4E1T1;CON__P13647;P13647;CON__P35908;P35908 CON__P05787;F8W1U3;H6VRG3;H6VRG2;CON__P35908 H6VRG2 KRT8;KRT5;KRT1B;KRT77;KRT3;KRT76;KRT1;KRT2 Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 1b;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 2 epidermal ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 356.1769 3 356.176972 1065.50909 NaN NaN NaN 0.1874 6.6747E-05 NaN NaN NaN NaN 62.426 1.476 62.426 62.23 63.706 0 0 0 0 0.0010718 1 29075 77.923 61.146 1 NaN NaN 0 17076000 17076000 0 + 6792 876;877;754;758;832 3474 3877 11149 11149 YEDEINRR 8 0 2 Unmodified _YEDEINRR_ 0 0 0 1 B3KY79;CON__P08729 B3KY79 B3KY79 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 372.1846 3 365.512355 1093.51524 99012.43 -0.090873 -3.3215E-05 0.15326 5.6018E-05 0.062387 2.2803E-05 365.512264309498 372.184681434095 64.904 0.40182 64.904 64.72 65.122 0 116 28 6 0 0 0 0.0020438 2 31069 74.127 59.461 1 0.94008 1.1687 0 73086000 36915000 36171000 + 6793 613 3475 3878 11150;11151 11151 YEDEINRR 8 0 2 Unmodified _YEDEINRR_ 0 0 0 1 B3KY79;CON__P08729 B3KY79 B3KY79 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 547.7646 2 547.764894 1093.51524 82480.97 0.54644 0.00029932 -0.3081 -0.00016876 0.23834 0.00013055 547.764447359475 557.773106329629 64.938 0.34258 64.938 64.737 65.079 0 106 24 7 0 0 0 4.7711E-06 1 31080 132.57 117.19 1 0.86561 1.0768 0 84894000 48002000 36892000 + 6794 613 3475 3878 11152 11152 YEDGIEVNQEIVVITTK 17 1 0 Unmodified _YEDGIEVNQEIVVITTK_ 0 0 0 0 O60832;H7C2Q2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 975.508 2 975.506945 1948.99934 66110.97 0.47596 0.0004643 -0.32939 -0.00032132 0.14657 0.00014298 976.00836292345 980.014981345222 132.4 0.631 132.4 132.14 132.77 0 174 51 5 0 0 0 9.3778E-16 1 80643 104.24 104.24 1 0.74793 0.88673 0 6361500 3047100 3314400 6795 931 3476 3879 11153 11153 YEEIVK 6 1 0 Unmodified _YEEIVK_ 0 0 0 0 A0A087WV01;Q9H2I7;Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q53GE9;Q53GA1;Q5VTE0;P68104;A9X7H1;Q96RE1;B4DV42;Q9NZS6;A0A087WVQ9;A8K9C4;Q8IUB0;Q53HR1;Q16577;Q504Z0;B4E2C5;Q53G89 A0A087WV01 A0A087WV01 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 390.7101 2 390.710537 779.40652 98084.88 -0.24732 -9.6632E-05 0.24441 9.5494E-05 -0.0029127 -1.138E-06 390.710523446655 394.717617630279 61.501 0.69989 61.501 61.123 61.823 -3.8147E-06 134 51 6 0 0 0 0.022823 1 28329 95.957 31.394 1 2.4194 3.0636 0 32322000 9357700 22965000 6796 252 3477 3880 11154 11154 YEELQITAGR 10 0 1 Unmodified _YEELQITAGR_ 0 0 0 0 H6VRG3;H6VRG0;H6VRF9;H6VRF8;H6VRG1;P04264;CON__P04264;H6VRG2 H6VRG3;H6VRG2 H6VRG2 KRT1 Keratin, type II cytoskeletal 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 590.3038 2 590.303852 1178.59315 NaN NaN NaN NaN NaN NaN NaN NaN NaN 80.885 1 80.885 80.385 81.385 0 0 0 0 0.00039582 1 42927 79.986 50.609 1 + 6797 876;877 3478 3881 11155 11155 YEITEQR 7 0 1 Unmodified _YEITEQR_ 0 0 0 0 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B4DRX3;B2R4K7 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 469.7328 2 469.732532 937.45051 NaN NaN NaN 0.1398 6.5668E-05 NaN NaN NaN NaN 55.123 0.99199 55.123 54.561 55.553 0 0 0 0 0.00090295 1 23294 80.462 30.423 1 NaN NaN 0 4339200 4339200 0 6798 199 3479 3882 11156 11156 YEITEQRK 8 1 1 Unmodified _YEITEQRK_ 0 0 0 1 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B4DRX3;B2R4K7 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 542.7917 2 533.780013 1065.54547 84655.5 0.40431 0.00021581 0.15782 8.4243E-05 0.56213 0.00030006 533.780067599758 542.791322735227 65.782 0.31169 65.782 65.614 65.926 0 74 23 5 0 0 0 0.017757 1 31747 87.323 69.937 1 1.1497 1.3346 0 28958000 15036000 13922000 6799 199 3480 3883 11157 11157 YELGRPAANTK 11 1 1 Unmodified _YELGRPAANTK_ 0 0 0 1 Q5JR95;Q5JR94;P62241 Q5JR95 Q5JR95 RPS8 40S ribosomal protein S8 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 610.3255 2 610.325119 1218.63569 79264.19 0.52607 0.00032107 -0.15068 -9.1963E-05 0.37539 0.00022911 610.325024227456 619.336072548937 70.768 0.72182 70.768 70.382 71.104 0 195 69 4 0 0 0 4.6389E-05 1 35449 92.611 73.633 1 0.67429 0.78236 0 28608000 14549000 14058000 6800 1016 3481 3884 11158 11158 YELGRPAANTK 11 1 1 Unmodified _YELGRPAANTK_ 0 0 0 1 Q5JR95;Q5JR94;P62241 Q5JR95 Q5JR95 RPS8 40S ribosomal protein S8 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 619.3377 2 610.325119 1218.63569 NaN NaN NaN NaN NaN NaN NaN NaN NaN 70.17 1 70.17 69.67 70.67 0 0 0 0 0.00076609 1 35044 77.288 52.394 1 6801 1016 3481 3884 11159 11159 YELVTELNDSRSECITATR 19 0 2 Phospho (STY) _YELVTELNDS(ph)RSECITATR_ YELVT(0.013)ELNDS(0.247)RS(0.247)ECIT(0.247)AT(0.247)R Y(-45.3)ELVT(-12.71)ELNDS(0)RS(0)ECIT(0)AT(0)R 0 0 1 1 P49454 P49454 P49454 CENPF Centromere protein F MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 786.3579 3 779.685795 2336.03556 68394.79 1.1523 0.00089845 -0.36427 -0.00028402 0.78805 0.00061443 780.019783639491 786.357573052144 101.43 0.90007 101.43 100.98 101.88 0 308 83 6 0 0 0 3.9599E-05 1 65238 45.784 36.853 6 1.6111 1.3836 0 17884000 6400400 11483000 6802 999 3482 3885 11160 11160 1818;1819;2898;2899 YENEVALR 8 0 1 Unmodified _YENEVALR_ 0 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 497.2533 2 497.253631 992.49271 NaN NaN NaN -0.082565 -4.1056E-05 NaN NaN NaN NaN 39.231 0.28743 39.231 39.074 39.362 0 0 0 0 0.017185 1 22617 62.464 27.656 1 NaN NaN 0 2454500 2454500 0 + 6803 755 3483 3886 11161 11161 YEQGFITDPVVLSPK 15 1 0 Phospho (STY) _YEQGFITDPVVLS(ph)PK_ YEQGFITDPVVLS(1)PK Y(-62.84)EQGFIT(-34.4)DPVVLS(34.4)PK 0 0 1 0 H0Y4R1;P12268;Q6QE17;B7Z1G4;E7ETK5 H0Y4R1 H0Y4R1 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 890.9366 2 886.928961 1771.84337 68439.88 0.75714 0.00067153 0.22819 0.00020239 0.98533 0.00087392 886.929441284117 890.935844938663 120.47 0.32472 120.47 120.33 120.66 0 70 28 4 0 0 0 0.00094889 2 72540 63.894 59.502 3 0.88589 1.0505 0 7260100 4392300 2867800 6804 850 3484 3887 11162;11163 11162 1461 YEYDPDISPPR 11 0 1 Phospho (STY) _YEYDPDIS(ph)PPR_ YEY(0.001)DPDIS(0.999)PPR Y(-45.49)EY(-31.24)DPDIS(31.24)PPR 0 0 1 0 A8K4Z6;Q9BRD0;H7C462 A8K4Z6 A8K4Z6 BUD13 BUD13 homolog ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 716.296 2 716.29504 1430.57553 NaN NaN NaN 0.030485 2.1837E-05 NaN NaN NaN NaN 86.614 0.1104 86.614 86.529 86.639 0 0 0 0 0.013326 1 46967 48.467 37.208 3 NaN NaN 0 3484400 3484400 0 6805 468 3485 3888 11164 11164 816 YFQSPSR 7 0 1 Phospho (STY) _YFQS(ph)PSR_ YFQS(0.856)PS(0.144)R Y(-92.34)FQS(7.73)PS(-7.73)R 0 0 1 0 H7BZZ6;Q16629 H7BZZ6 H7BZZ6 SRSF7 Serine/arginine-rich splicing factor 7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 487.7043 2 482.69985 963.385147 87421.27 0.36674 0.00017703 0.094749 4.5735E-05 0.46149 0.00022276 482.699788256304 487.70396272432 41.683 1.4476 41.683 40.966 42.413 3.8147E-06 525 120 6 0 0 0 0.0074961 2 14702 97.431 88.096 3 1.1312 1.2832 0 10979000 4959000 6020000 6806 881 3486 3889 11165;11166 11165 1488 YGDGPRPPK 9 1 1 Unmodified _YGDGPRPPK_ 0 0 0 1 Q08211;B3KU66 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 502.768 2 493.756341 985.498129 85602.45 0.39842 0.00019672 -0.015978 -7.8893E-06 0.38244 0.00018883 493.756319424421 502.767450427565 64.844 0.73354 64.844 64.389 65.122 0 221 54 6 0 0 0 0.0048439 1 30890 71.501 46.578 1 1.1843 1.4104 0 81376000 36412000 44963000 6807 1040 3487 3890 11167 11167 YGEYFPGTGDLR 12 0 1 Unmodified _YGEYFPGTGDLR_ 0 0 0 0 B3KUJ5;Q92769;Q6IT96;B5BU61;Q13547;Q5TEE2;B4DSK9;B7Z3S4;B4DRG0 B3KUJ5;Q6IT96 B3KUJ5 HDAC2;HDAC1 Histone deacetylase;Histone deacetylase 2;Histone deacetylase 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 687.8193 2 687.819867 1373.62518 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.39 1 100.39 99.888 100.89 0 0 0 0 0.00039807 1 57468 63.283 44.503 1 6808 601;690 3488 3891 11168 11168 YGIICMEDLIHEIYTVGK 18 1 0 Oxidation (M) _YGIICM(ox)EDLIHEIYTVGK_ YGIICM(1)EDLIHEIYTVGK YGIICM(72.18)EDLIHEIYTVGK 0 1 0 0 A8MUD9;O95036;A0A024R814;P18124 A8MUD9 A8MUD9 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 727.0302 3 724.023481 2169.04861 71690.78 1.0804 0.00078226 0.28146 0.00020378 1.3619 0.00098604 724.357949312789 727.029578493229 133.47 0.19528 133.47 133.37 133.57 0 27 8 7 0 0 0 1.2923E-07 3 81298 72.184 63.534 1 2.25 2.7692 0 22648000 6602800 16045000 6809 145 3489 3892 11169;11170;11171 11171 32 YGLIYHASLVGQTSPK 16 1 0 Phospho (STY) _YGLIYHASLVGQT(ph)SPK_ YGLIYHASLVGQT(0.5)S(0.5)PK Y(-80.83)GLIY(-60.55)HAS(-36.33)LVGQT(0)S(0)PK 0 0 1 0 B3KN82;Q9Y2X3 B3KN82 B3KN82 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 607.973 3 605.300993 1812.88115 78779.09 0.8097 0.00049011 0.071895 4.3518E-05 0.8816 0.00053363 605.300949057118 607.972466265748 107.5 1.2016 107.5 106.77 107.97 0 341 96 5 0 0 0 1.6856E-09 2 62876 82.651 73.832 5 1.1239 1.4227 0 32119000 18561000 13558000 6810 578 3490 3893 11172;11173 11172 960;961;2768 YGLIYHASLVGQTSPK 16 1 0 Phospho (STY) _YGLIYHASLVGQT(ph)SPK_ YGLIY(0.001)HAS(0.017)LVGQT(0.491)S(0.491)PK Y(-41.96)GLIY(-29.44)HAS(-14.68)LVGQT(0)S(0)PK 0 0 1 0 B3KN82;Q9Y2X3 B3KN82 B3KN82 NOP58 Nucleolar protein 58 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 607.9743 3 605.300993 1812.88115 78779.09 0.93583 0.00056646 0.085512 5.176E-05 1.0213 0.00061822 605.635407631794 607.972608255442 108.14 0.61441 108.14 107.93 108.54 0 137 46 5 0 0 0 0.00023664 1 63429 42.958 42.958 5 1.1274 1.4043 0 25535000 11518000 14017000 6811 578 3490 3893 11174 11174 960;961;2768 YGLIYHASLVGQTSPK 16 1 0 Phospho (STY) _YGLIYHAS(ph)LVGQTSPK_ YGLIYHAS(0.404)LVGQT(0.298)S(0.298)PK Y(-34.98)GLIY(-31.86)HAS(1.32)LVGQT(-1.32)S(-1.32)PK 0 0 1 0 B3KN82;Q9Y2X3 B3KN82 B3KN82 NOP58 Nucleolar protein 58 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 907.4488 2 907.447852 1812.88115 NaN NaN NaN NaN NaN NaN NaN NaN NaN 107.08 1 107.08 106.58 107.58 0 0 0 0 0.0044367 1 62424 40.589 16.603 5 6812 578 3490 3893 11175 11175 960;961;2768 YGLIYHASLVGQTSPK 16 1 0 Phospho (STY) _YGLIYHASLVGQT(ph)SPK_ YGLIYHAS(0.016)LVGQT(0.558)S(0.426)PK Y(-59.99)GLIY(-34.99)HAS(-15.45)LVGQT(1.17)S(-1.17)PK 0 0 1 0 B3KN82;Q9Y2X3 B3KN82 B3KN82 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 605.3023 3 605.300993 1812.88115 77667.83 0.97285 0.00058887 0.34544 0.00020909 1.3183 0.00079796 605.301042270664 607.972698752247 102.9 1.5649 102.9 102.24 103.81 0 697 152 7 0 0 0 3.2305E-05 2 66426 61.767 55.641 5 1.2121 0.78939 0 41033000 17120000 23913000 6813 578 3490 3893 11176;11177 11177 960;961;2768 YGLIYHASLVGQTSPK 16 1 0 Phospho (STY) _YGLIYHASLVGQT(ph)SPK_ YGLIYHAS(0.021)LVGQT(0.489)S(0.489)PK Y(-43.29)GLIY(-40.75)HAS(-13.67)LVGQT(0)S(0)PK 0 0 1 0 B3KN82;Q9Y2X3 B3KN82 B3KN82 NOP58 Nucleolar protein 58 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 907.4494 2 907.447852 1812.88115 64577.97 1.0727 0.00097339 0.6814 0.00061833 1.7541 0.0015917 907.447772751473 911.455899366948 102.88 1.2981 102.88 102.43 103.73 0 636 126 8 0 0 0 0.0046768 2 66508 43.604 43.604 5 1.1562 0.75 0 33662000 14870000 18792000 6814 578 3490 3893 11178;11179 11178 960;961;2768 YGLQDSDEEEEEHPSK 16 1 0 Phospho (STY) _YGLQDS(ph)DEEEEEHPSK_ Y(0.001)GLQDS(0.979)DEEEEEHPS(0.02)K Y(-30.38)GLQDS(16.93)DEEEEEHPS(-16.93)K 0 0 1 0 A0A024RCC4;P52948;B4DWF8;A8KA17 A0A024RCC4 A0A024RCC4 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 660.5931 3 657.921235 1970.74188 74670.74 0.85857 0.00056487 -0.088941 -5.8516E-05 0.76963 0.00050635 657.921234396617 660.592495152129 55.828 0.92805 55.828 55.245 56.173 0 492 74 10 0 0 0 0.00062883 1 24157 40.381 40.381 3 1.2591 1.5627 0 108490000 49040000 59454000 6815 209 3491 3894 11180 11180 326 YGLQDSDEEEEEHPSK 16 1 0 Phospho (STY) _YGLQDS(ph)DEEEEEHPSK_ Y(0.043)GLQDS(0.957)DEEEEEHPS(0.001)K Y(-13.51)GLQDS(13.51)DEEEEEHPS(-30.89)K 0 0 1 0 A0A024RCC4;P52948;B4DWF8;A8KA17 A0A024RCC4 A0A024RCC4 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 986.3785 2 986.378214 1970.74188 NaN NaN NaN 1.5798 0.0015583 NaN NaN NaN NaN 36.133 1.3025 36.133 35.805 37.108 0 0 0 0 0.0039618 1 20253 40.844 31.056 3 NaN NaN 0 31868000 31868000 0 6816 209 3491 3894 11181 11181 326 YGPIADVSIVYDQQSR 16 0 1 Unmodified _YGPIADVSIVYDQQSR_ 0 0 0 0 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995 Q8N1H4 Q8N1H4 DKFZp686F18120;TRA2B Transformer-2 protein homolog beta MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 905.9536 2 905.95214 1809.88973 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.34 1 110.34 109.84 110.84 0 0 0 0 0.00025337 1 65103 72.958 58.267 1 6817 556 3492 3895 11182 11182 YGPIADVSIVYDQQSR 16 0 1 Unmodified _YGPIADVSIVYDQQSR_ 0 0 0 0 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995 Q8N1H4 Q8N1H4 DKFZp686F18120;TRA2B Transformer-2 protein homolog beta MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 910.9569 2 905.95214 1809.88973 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.52 1 110.52 110.02 111.02 0 0 0 0 0.015097 1 65237 35.204 26.474 1 6818 556 3492 3895 11183 11183 YGSFEEAEASYPILNR 16 0 1 Phospho (STY) _YGS(ph)FEEAEASYPILNR_ Y(0.344)GS(0.656)FEEAEASYPILNR Y(-2.8)GS(2.8)FEEAEAS(-32.21)Y(-37.48)PILNR 0 0 1 0 O95425 O95425 O95425 SVIL Supervillin ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 968.9263 2 963.419488 1924.82442 NaN NaN NaN 0.21899 0.00021098 NaN NaN NaN NaN 113.15 0.42371 113.15 112.94 113.37 0 0 0 0 0.0016917 1 67167 45.614 33.748 4 NaN NaN 0 9764400 0 9764400 6819 948 3493 3896 11184 11184 1646 YGSFEEAEASYPILNR 16 0 1 Phospho (STY) _YGS(ph)FEEAEASYPILNR_ Y(0.019)GS(0.981)FEEAEASYPILNR Y(-17.04)GS(17.04)FEEAEAS(-61.01)Y(-63.74)PILNR 0 0 1 0 O95425 O95425 O95425 SVIL Supervillin ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 968.9258 2 963.419488 1924.82442 NaN NaN NaN 0.30173 0.00029069 NaN NaN NaN NaN 120.58 0.50676 120.58 120.29 120.8 0 0 0 0 2.5913E-06 1 77884 68.919 54.229 4 NaN NaN 0 7978700 0 7978700 6820 948 3493 3896 11185 11185 1646 YHPGYFGK 8 1 0 Unmodified _YHPGYFGK_ 0 0 0 0 Q9BQQ5;E9PLL6;Q6NZ52;P46776 Q9BQQ5 Q9BQQ5 L27a;RPL27A 60S ribosomal protein L27a ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 484.7353 2 484.734877 967.455202 NaN NaN NaN 0.10545 5.1113E-05 NaN NaN NaN NaN 90.562 0.49786 90.562 90.444 90.942 0 0 0 0 0.020223 1 50075 57.559 16.613 1 NaN NaN 0 26510000 26510000 0 6821 813 3494 3897 11186 11186 YHPGYFGK 8 1 0 Unmodified _YHPGYFGK_ 0 0 0 0 Q9BQQ5;E9PLL6;Q6NZ52;P46776 Q9BQQ5 Q9BQQ5 L27a;RPL27A 60S ribosomal protein L27a MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 488.7426 2 484.734877 967.455202 NaN NaN NaN NaN NaN NaN NaN NaN NaN 88.192 1 88.192 87.692 88.692 7.6294E-06 0 0 0 0.019339 1 48099 57.559 16.613 1 6822 813 3494 3897 11187 11187 YHPGYFGK 8 1 0 Unmodified _YHPGYFGK_ 0 0 0 0 Q9BQQ5;E9PLL6;Q6NZ52;P46776 Q9BQQ5 Q9BQQ5 L27a;RPL27A 60S ribosomal protein L27a MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 484.7352 2 484.734877 967.455202 87272.33 0.51966 0.0002519 0.025599 1.2409E-05 0.54526 0.00026431 484.734754872738 488.741843877387 27.543 0.40811 27.543 27.39 27.798 -1.9073E-06 110 23 8 0 0 0 0.015947 1 13509 92.319 43.816 1 0.86801 0.56791 0 48721000 25882000 22839000 6823 813 3494 3897 11188 11188 YHSDDYIK 8 1 0 Unmodified _YHSDDYIK_ 0 0 0 0 Q6IT96;B5BU61;Q13547;Q5TEE2;B4DSK9;B7Z3S4 Q6IT96 Q6IT96 HDAC1 Histone deacetylase;Histone deacetylase 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 520.7383 2 520.737814 1039.46108 85056.88 0.52508 0.00027343 0.47297 0.00024629 0.99805 0.00051972 520.737850840148 524.745179473085 80.345 1.035 80.345 79.87 80.905 0 294 95 5 0 0 0 0.02128 1 42419 81.119 51.969 1 0.9073 1.1455 0 47149000 25058000 22090000 6824 690 3495 3898 11189 11189 YHSDEYIK 8 1 0 Unmodified _YHSDEYIK_ 0 0 0 0 B3KUJ5;Q92769;E5RFI6;E5RJ04;E5RGV4;E5RHE7;E5RH52;E5RG37;E5RFP9;H3BM24;E5RK19 B3KUJ5 B3KUJ5 HDAC2 Histone deacetylase;Histone deacetylase 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 531.7528 2 527.745639 1053.47673 83585.73 0.57596 0.00030396 0.5778 0.00030493 1.1538 0.00060889 527.745634561785 531.752693162739 80.092 1.1286 80.092 79.492 80.62 -7.6294E-06 426 104 6 0 0 0 0.019857 2 42248 110.12 76.117 1 0.8944 1.1121 0 85134000 45446000 39688000 6825 601 3496 3899 11190;11191 11191 YHTINGHNAEVR 12 0 1 Unmodified _YHTINGHNAEVR_ 0 0 0 0 I6L957;A0A087WUI2;A0A024RA28;P22626 I6L957 I6L957 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 474.2373 3 470.900613 1409.68001 NaN NaN NaN NaN NaN NaN NaN NaN NaN 86.497 1 86.497 85.997 86.997 0 0 0 0 9.3897E-05 1 46876 80.69 62.355 1 6826 177 3497 3900 11192 11192 YHTINGHNAEVR 12 0 1 Unmodified _YHTINGHNAEVR_ 0 0 0 0 I6L957;A0A087WUI2;A0A024RA28;P22626 I6L957 I6L957 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 474.2633 3 470.900613 1409.68001 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.164 1 87.164 86.664 87.664 0 0 0 0 6.155E-05 1 47338 74.392 51.017 1 6827 177 3497 3900 11193 11193 YHTINGHNAEVR 12 0 1 Unmodified _YHTINGHNAEVR_ 0 0 0 0 I6L957;A0A087WUI2;A0A024RA28;P22626 I6L957 I6L957 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 474.2371 3 470.900613 1409.68001 NaN NaN NaN NaN NaN NaN NaN NaN NaN 87.277 1 87.277 86.777 87.777 0 0 0 0 0.00046695 1 47426 67.252 53.818 1 6828 177 3497 3900 11194 11194 YHTSQSGDEMTSLSEYVSR 19 0 1 Oxidation (M) _YHTSQSGDEM(ox)TSLSEYVSR_ YHTSQSGDEM(1)TSLSEYVSR YHTSQSGDEM(56.33)TSLSEYVSR 0 1 0 0 A0A024RD80;P08238;B4DMA2;B4DGL0;Q9H6X9;A8K3W9 A0A024RD80 A0A024RD80 HSP90AB1 Heat shock protein HSP 90-beta MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 735.3237 3 731.65154 2191.93279 70512.5 1.3355 0.00097712 -0.12627 -9.2386E-05 1.2092 0.00088474 731.985696063962 734.987694074541 97.491 1.3729 97.491 96.602 97.975 0 445 113 6 0 0 0 3.5557E-07 2 54640 56.327 52.455 1 2.8523 3.5984 0 68190000 16230000 51961000 6829 223 3498 3901 11195;11196 11195 56 YHTVNGHNCEVR 12 0 1 Unmodified _YHTVNGHNCEVR_ 0 0 0 0 F8W6I7;A0A024RC46;A0A024RB53;A0A024RAZ7;P09651;F8VTQ5;Q6IPF2;F8VZ49;Q9BSM5;Q0VAC0;Q3MI39;H0YH80 F8W6I7 F8W6I7 HNRNPA1;hCG_2020860;HNRPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 499.2299 3 495.893241 1484.65789 NaN NaN NaN NaN NaN NaN NaN NaN NaN 78.473 1 78.473 77.973 78.973 7.6294E-06 0 0 0 0.00064734 1 41143 64.827 47.659 1 6830 188 3499 3902 11197 11197 YHVVSGADDYTVK 13 1 0 Unmodified _YHVVSGADDYTVK_ 0 0 0 0 H0Y8P4;Q8TED0 H0Y8P4 H0Y8P4 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 727.8534 2 727.351531 1452.68851 74509.25 0.96634 0.00070287 0.60317 0.00043871 1.5695 0.0011416 727.352074416648 731.359163928223 89.465 0.53362 89.465 89.16 89.694 7.6294E-06 108 45 4 0 0 0 0.017346 1 48901 53.327 49.31 1 1.0394 1.2452 0 14268000 7884700 6383100 6831 853 3500 3903 11198 11198 YHVVSGADDYTVK 13 1 0 Unmodified _YHVVSGADDYTVK_ 0 0 0 0 H0Y8P4;Q8TED0 H0Y8P4 H0Y8P4 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 731.3586 2 727.351531 1452.68851 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.696 1 89.696 89.196 90.196 7.6294E-06 0 0 0 9.695E-05 1 49209 67.113 43.684 1 6832 853 3500 3903 11199 11199 YHVVSGADDYTVK 13 1 0 Unmodified _YHVVSGADDYTVK_ 0 0 0 0 H0Y8P4;Q8TED0 H0Y8P4 H0Y8P4 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 727.3543 2 727.351531 1452.68851 NaN NaN NaN NaN NaN NaN NaN NaN NaN 89.835 1 89.835 89.335 90.335 0 0 0 0 0.00037291 1 49306 60.518 44.265 1 6833 853 3500 3903 11200 11200 YIASVQGSTPSPR 13 0 1 2 Phospho (STY) _YIASVQGST(ph)PS(ph)PR_ YIASVQGS(0.195)T(0.832)PS(0.973)PR Y(-71.63)IAS(-40.58)VQGS(-6.81)T(6.81)PS(14.8)PR 0 0 2 0 D3DX73;P49792;F8WBP7 D3DX73 D3DX73 hCG_1994636;RANBP2 E3 SUMO-protein ligase RanBP2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 766.8241 2 761.820571 1521.62659 68556.48 0.80611 0.00061411 0.022931 1.7469E-05 0.82904 0.00063158 761.820520980679 766.824494427191 59.702 1.3595 59.702 59.042 60.402 0 458 99 6 0 0 0 1.3812E-05 2 26670 90.689 57.426 10 1.4698 1.8547 0 73117000 28867000 44250000 6834 769 3501 3904 11201;11202 11202 1298;2811 YIASVQGSTPSPR 13 0 1 2 Phospho (STY) _YIASVQGST(ph)PS(ph)PR_ YIAS(0.01)VQGS(0.246)T(0.774)PS(0.97)PR Y(-61.62)IAS(-19.32)VQGS(-5.37)T(5.37)PS(14.19)PR 0 0 2 0 D3DX73;P49792;F8WBP7 D3DX73 D3DX73 hCG_1994636;RANBP2 E3 SUMO-protein ligase RanBP2 ISO-MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 761.8214 2 761.820571 1521.62659 NaN NaN NaN -0.18162 -0.00013836 NaN NaN NaN NaN 63.396 0.99142 63.396 62.941 63.933 0 0 0 0 0.00046581 1 39430 73.415 41.572 10 NaN NaN 0 19530000 19530000 0 6835 769 3501 3904 11203 11203 1298;2811 YIASVQGSTPSPR 13 0 1 Phospho (STY) _YIASVQGSTPS(ph)PR_ YIASVQGS(0.011)T(0.058)PS(0.93)PR Y(-97.6)IAS(-43.91)VQGS(-19.15)T(-12.04)PS(12.04)PR 0 0 1 0 D3DX73;P49792;F8WBP7 D3DX73 D3DX73 hCG_1994636;RANBP2 E3 SUMO-protein ligase RanBP2 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 726.841 2 721.837406 1441.66026 NaN NaN NaN -0.59639 -0.00043049 NaN NaN NaN NaN 61.514 1.0871 61.514 61.153 62.24 3.8147E-06 0 0 0 2.0952E-10 2 28274 100.11 66.849 5 NaN NaN 0 12901000 0 12901000 6836 769 3501 3905 11204;11205 11204 1298;2811 YIASVQGSTPSPR 13 0 1 Phospho (STY) _YIASVQGSTPS(ph)PR_ YIASVQGS(0.243)T(0.145)PS(0.613)PR Y(-77.07)IAS(-42.45)VQGS(-4.02)T(-6.27)PS(4.02)PR 0 0 1 0 D3DX73;P49792;F8WBP7 D3DX73 D3DX73 hCG_1994636;RANBP2 E3 SUMO-protein ligase RanBP2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 726.8419 2 721.837406 1441.66026 79643.13 1.1679 0.00084304 1.0584 0.000764 2.2263 0.001607 721.83804599449 726.841910038173 57.429 0.55529 57.429 57.051 57.606 0 128 48 4 0 0 0 0.00026887 2 35359 80.746 55.971 5 1.7812 1.4304 0 8181300 2747000 5434200 6837 769 3501 3905 11206;11207 11207 1298;2811 YIEIDSDEEPR 11 0 1 Phospho (STY) _YIEIDS(ph)DEEPR_ YIEIDS(1)DEEPR Y(-37.6)IEIDS(37.6)DEEPR 0 0 1 0 E7EW05;B4DT66;Q9NVU7 E7EW05 E7EW05 SDAD1 Protein SDA1 homolog ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 728.2998 2 723.295237 1444.57592 NaN NaN NaN -1.1956 -0.00086478 NaN NaN NaN NaN 76.676 0.32349 76.676 76.41 76.733 0 0 0 0 0.025913 1 48792 40.475 24.611 2 NaN NaN 0 2141400 0 2141400 6838 659 3502 3906 11208 11208 1095 YIEIDSDEEPR 11 0 1 Phospho (STY) _YIEIDS(ph)DEEPR_ YIEIDS(1)DEEPR Y(-69.39)IEIDS(69.39)DEEPR 0 0 1 0 E7EW05;B4DT66;Q9NVU7 E7EW05 E7EW05 SDAD1 Protein SDA1 homolog MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 723.2973 2 723.295237 1444.57592 NaN NaN NaN NaN NaN NaN NaN NaN NaN 76.573 1 76.573 76.073 77.073 0 0 0 0 0.00018659 1 48847 76.326 50.314 2 6839 659 3502 3906 11209 11209 1095 YIEIDSDEEPRGELLSLR 18 0 2 Phospho (STY) _YIEIDS(ph)DEEPRGELLSLR_ YIEIDS(0.996)DEEPRGELLS(0.004)LR Y(-46.08)IEIDS(23.73)DEEPRGELLS(-23.73)LR 0 0 1 1 E7EW05;B4DT66;Q9NVU7 E7EW05 E7EW05 SDAD1 Protein SDA1 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 738.6838 3 738.682379 2213.02531 72094.7 0.87383 0.00064548 -0.18232 -0.00013467 0.69151 0.00051081 738.68221300957 745.688850253296 115.48 0.82796 115.48 115.15 115.98 -7.6294E-06 220 71 6 0 0 0 2.696E-06 3 68761 56.081 41.488 3 0.71238 0.88142 0 32755000 16650000 16105000 6840 659 3503 3907 11210;11211;11212 11211 1095 YIEIDSDEEPRGELLSLR 18 0 2 Phospho (STY) _YIEIDS(ph)DEEPRGELLSLR_ YIEIDS(0.972)DEEPRGELLS(0.028)LR Y(-39.95)IEIDS(15.38)DEEPRGELLS(-15.38)LR 0 0 1 1 E7EW05;B4DT66;Q9NVU7 E7EW05 E7EW05 SDAD1 Protein SDA1 homolog MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 739.0177 3 738.682379 2213.02531 71092.11 1.1904 0.00087932 0.58857 0.00043477 1.779 0.0013141 739.017090008179 745.689300105341 118.69 0.83405 118.69 118.46 119.29 0 495 72 12 0 0 0 7.1325E-05 1 76452 44.5 27.993 3 0.77744 0.67723 0 125600000 69238000 56358000 6841 659 3503 3907 11213 11213 1095 YKDDPVDLR 9 1 1 Unmodified _YKDDPVDLR_ 0 0 0 1 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 569.7972 2 560.785296 1119.55604 82530.97 1.098 0.00061572 0.00073357 4.1138E-07 1.0987 0.00061613 560.785338382584 569.796446964923 92.781 1.0339 92.781 92.194 93.228 -7.6294E-06 239 90 4 0 0 0 0.018019 1 51414 62.005 48.009 1 1.4514 1.7051 0 40082000 17495000 22587000 6842 1248 3504 3908 11214 11214 YKLDEDEDEDDADLSK 16 2 0 Phospho (STY) _YKLDEDEDEDDADLS(ph)K_ YKLDEDEDEDDADLS(1)K Y(-79.36)KLDEDEDEDDADLS(79.36)K 0 0 1 1 O95218 O95218 O95218 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 990.3871 2 990.385705 1978.75686 61352.89 0.28899 0.00028621 0.4607 0.00045627 0.74969 0.00074248 990.386100114511 998.400638472985 73.626 0.69305 73.626 73.312 74.005 0 206 59 5 0 0 0 7.4051E-07 1 37716 79.511 79.511 2 2.2236 2.6495 0 26325000 9835500 16490000 6843 942 3505 3909 11215 11215 1613 YKPLDLRPK 9 2 1 Unmodified _YKPLDLRPK_ 0 0 0 2 P42766 P42766 P42766 RPL35 60S ribosomal protein L35 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 377.2289 3 377.229119 1128.66553 95457.88 0.041326 1.5589E-05 -0.19802 -7.47E-05 -0.1567 -5.911E-05 377.228985980074 385.907902306006 123.36 3.983 123.36 120.43 124.41 0 1288 326 5 0 0 0 3.59E-05 9 74923 90.601 90.601 1 0.50844 0.5985 0 86720000 57414000 29306000 6844 992 3506 3910 11216;11217;11218;11219;11220;11221;11222;11223;11224 11223 YKPLDLRPK 9 2 1 Unmodified _YKPLDLRPK_ 0 0 0 2 P42766 P42766 P42766 RPL35 60S ribosomal protein L35 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 385.9079 3 377.229119 1128.66553 NaN NaN NaN -0.2908 -0.0001097 NaN NaN NaN NaN 124.85 1.1189 124.85 124.31 125.43 7.6294E-06 0 0 0 0.015222 1 75770 45.161 18.488 1 NaN NaN 0 14056000 0 14056000 6845 992 3506 3910 11225 11225 YKPLDLRPK 9 2 1 Unmodified _YKPLDLRPK_ 0 0 0 2 P42766 P42766 P42766 RPL35 60S ribosomal protein L35 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 377.2291 3 377.229119 1128.66553 NaN NaN NaN -0.29173 -0.00011005 NaN NaN NaN NaN 126.1 2.0747 126.1 125.43 127.5 0 0 0 0 0.002178 2 76914 57.55 34.23 1 NaN NaN 0 9341100 9341100 0 6846 992 3506 3910 11226;11227 11227 YLEESDEDDLF 11 0 0 Phospho (STY) _YLEES(ph)DEDDLF_ Y(0.001)LEES(0.999)DEDDLF Y(-31.25)LEES(31.25)DEDDLF 0 0 1 0 P11388;J3QR57 P11388 P11388 TOP2A DNA topoisomerase 2-alpha ISO-MSMS -1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 727.7662 2 727.765978 1453.5174 NaN NaN NaN 0.15736 0.00011452 NaN NaN NaN NaN 124.26 1.185 124.26 123.88 125.06 0 0 0 0 0.022341 1 75300 42.743 26.541 2 6847 962 3507 3911 11228 11228 1707 YLHENLPIPQR 11 0 1 Unmodified _YLHENLPIPQR_ 0 0 0 0 P54886 P54886 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 463.9217 3 460.585854 1378.73573 93452.3 0.28251 0.00013012 -0.86091 -0.00039652 -0.57839 -0.0002664 460.585212296529 463.921532273738 106.54 0.33572 106.54 106.36 106.69 0 61 22 4 0 0 0 0.01753 1 62009 32.254 32.254 1 1.805 2.0299 0 10404000 4282900 6121100 6848 1007 3508 3912 11229 11229 YLHSPESRPVTGER 14 0 2 Phospho (STY) _YLHS(ph)PESRPVTGER_ Y(0.004)LHS(0.875)PES(0.102)RPVT(0.02)GER Y(-23.91)LHS(9.33)PES(-9.33)RPVT(-16.43)GER 0 0 1 1 B2RWN8;Q8WYB5;A7E2B6 B2RWN8 B2RWN8 MYST4;KAT6B Histone acetyltransferase;Histone acetyltransferase KAT6B MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 576.6067 3 569.933193 1706.77775 79663.46 0.088946 5.0694E-05 1.0789 0.00061491 1.1679 0.00066561 569.93355949176 576.605852796978 24.188 0.41566 24.188 23.996 24.411 0 122 23 8 0 0 0 0.0020947 1 10610 40.844 36.13 4 2.2264 1.9086 0 16355000 4029700 12325000 6849 564 3509 3913 11230 11230 931 YLLGDAPVSPSSQK 14 1 0 Phospho (STY) _YLLGDAPVS(ph)PSSQK_ YLLGDAPVS(0.718)PS(0.141)S(0.141)QK Y(-73.54)LLGDAPVS(7.06)PS(-7.06)S(-7.06)QK 0 0 1 0 Q9NYB0;H3BMI8 Q9NYB0 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 771.366 2 771.365996 1540.71744 NaN NaN NaN -0.1732 -0.0001336 NaN NaN NaN NaN 90.115 1.1137 90.115 89.502 90.616 0 0 0 0 1.7137E-07 2 49693 91.812 53.574 4 NaN NaN 0 24149000 24149000 0 6850 1224 3510 3914 11231;11232 11232 2487 YLLGDAPVSPSSQK 14 1 0 Phospho (STY) _YLLGDAPVS(ph)PSSQK_ YLLGDAPVS(0.78)PS(0.11)S(0.11)QK Y(-49.55)LLGDAPVS(8.5)PS(-8.5)S(-8.5)QK 0 0 1 0 Q9NYB0;H3BMI8 Q9NYB0 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 771.3651 2 771.365996 1540.71744 NaN NaN NaN -0.96607 -0.00074519 NaN NaN NaN NaN 91.478 0.36022 91.478 91.276 91.636 0 0 0 0 0.00042256 1 50564 63.709 25.075 4 NaN NaN 0 9748700 9748700 0 6851 1224 3510 3914 11233 11233 2487 YLLGDAPVSPSSQK 14 1 0 Phospho (STY) _YLLGDAPVS(ph)PSSQK_ YLLGDAPVS(0.769)PS(0.116)S(0.116)QK Y(-67.8)LLGDAPVS(8.23)PS(-8.23)S(-8.23)QK 0 0 1 0 Q9NYB0;H3BMI8 Q9NYB0 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 771.3672 2 771.365996 1540.71744 69937.35 0.90354 0.00069696 0.17902 0.00013809 1.0826 0.00083505 771.366162506113 775.373213033363 93.629 0.79559 93.629 93.198 93.994 7.6294E-06 551 77 11 0 0 0 6.4529E-08 2 60170 93.237 64.839 4 1.7936 1.1982 0 229640000 81860000 147780000 6852 1224 3510 3914 11234;11235 11235 2487 YLLSQSSPAPLTAAEEELR 19 0 1 Phospho (STY) _YLLS(ph)QSSPAPLTAAEEELR_ Y(0.004)LLS(0.332)QS(0.332)S(0.332)PAPLT(0.001)AAEEELR Y(-19.14)LLS(0)QS(0)S(0)PAPLT(-24.47)AAEEELR 0 0 1 0 F8VS81;Q12792 F8VS81 F8VS81 TWF1 Twinfilin-1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1083.5238 2 1078.01957 2154.02458 62584.93 0.52744 0.00056859 -0.79572 -0.0008578 -0.26828 -0.00028921 1078.51967395101 1083.52450568245 125.49 0.36618 125.49 125.3 125.67 0 90 32 6 0 0 0 2.6575E-05 1 75958 51.875 40.342 5 1.483 1.695 0 11509000 2634000 8875100 6853 828 3511 3915 11236 11236 1422;1423;1424 YLMEEDEDAYKK 12 2 0 Oxidation (M) _YLM(ox)EEDEDAYKK_ YLM(1)EEDEDAYKK YLM(137.16)EEDEDAYKK 0 1 0 1 B3KTM6;A2RUM7;Q59GX9;P46777 B3KTM6 B3KTM6 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 522.572 3 517.229073 1548.66539 83669.13 0.20417 0.0001056 -0.30085 -0.00015561 -0.096687 -5.001E-05 517.22911276136 522.571809585233 66.05 0.82552 66.05 65.736 66.561 0 347 62 8 0 0 0 6.2713E-21 2 31928 137.16 137.16 1 1.2354 1.6054 0 168030000 72191000 95841000 6854 409 3512 3916 11237;11238 11237 106 YLMEEDEDAYKK 12 2 0 Oxidation (M) _YLM(ox)EEDEDAYKK_ YLM(1)EEDEDAYKK YLM(98.04)EEDEDAYKK 0 1 0 1 B3KTM6;A2RUM7;Q59GX9;P46777 B3KTM6 B3KTM6 RPL5 60S ribosomal protein L5 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 783.3559 2 775.339972 1548.66539 69663.34 0.58253 0.00045166 -0.27215 -0.00021101 0.31038 0.00024065 775.339753410621 783.354229040072 65.999 0.56474 65.999 65.815 66.38 0 185 44 6 0 0 0 8.9762E-07 2 31934 98.044 98.044 1 1.1134 1.3574 0 31797000 13249000 18548000 6855 409 3512 3916 11239;11240 11239 106 YLPHSAGR 8 0 1 Unmodified _YLPHSAGR_ 0 0 0 0 M0R0F0;A0A024R4Q8;M0R0R2;P46782;Q53G25 M0R0F0 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 304.1638 3 300.827726 899.46135 109565.4 -0.53623 -0.00016131 0.41279 0.00012418 -0.12345 -3.7136E-05 300.82778471081 304.163870800808 66.718 0.48262 66.718 66.442 66.925 0 133 32 6 0 0 0 0.0090349 1 32489 47.574 36.41 1 1.1509 1.4542 0 155070000 65304000 89765000 6856 91 3513 3917 11241 11241 YLSADSGDADDSDADLGSAVK 21 1 0 Phospho (STY) _YLSADS(ph)GDADDSDADLGSAVK_ Y(0.002)LS(0.131)ADS(0.867)GDADDSDADLGSAVK Y(-25.48)LS(-8.21)ADS(8.21)GDADDS(-35.29)DADLGS(-52.26)AVK 0 0 1 0 B4DZG2;A0A024R8C1;Q15361 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1080.4363 2 1076.43372 2150.85288 62318.2 -0.020644 -2.2222E-05 0.35478 0.0003819 0.33414 0.00035968 1076.43376645235 1080.44137056076 83.328 0.56516 83.328 83.085 83.651 0 133 49 4 0 0 0 2.897E-12 1 44573 66.285 56.752 5 0.88367 1.0965 0 24573000 13846000 10728000 6857 150 3514 3918 11242 11242 229;230;231 YLSADSGDADDSDADLGSAVK 21 1 0 Phospho (STY) _YLSADSGDADDS(ph)DADLGSAVK_ YLS(0.001)ADS(0.049)GDADDS(0.944)DADLGS(0.006)AVK Y(-42.37)LS(-32.56)ADS(-12.87)GDADDS(12.87)DADLGS(-21.72)AVK 0 0 1 0 B4DZG2;A0A024R8C1;Q15361 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1076.8724 2 1076.43372 2150.85288 61556.57 0.39495 0.00042513 -0.094741 -0.00010198 0.3002 0.00032315 1076.93525494722 1080.44104900201 80.968 1.0051 80.968 80.555 81.56 0 385 92 6 0 0 0 2.4971E-07 1 43007 61.087 44.737 5 1.1717 1.4775 0 48859000 18835000 30024000 6858 150 3514 3918 11243 11243 229;230;231 YLSADSGDADDSDADLGSAVK 21 1 0 2 Phospho (STY) _YLSADS(ph)GDADDS(ph)DADLGSAVK_ YLS(0.016)ADS(0.984)GDADDS(1)DADLGSAVK Y(-33.89)LS(-18.08)ADS(18.08)GDADDS(37.22)DADLGS(-43.27)AVK 0 0 2 0 B4DZG2;A0A024R8C1;Q15361 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1116.9211 2 1116.41688 2230.81921 61203.81 0.27603 0.00030817 0.121 0.00013509 0.39703 0.00044325 1116.91843441453 1120.42517016253 88.166 0.50981 88.166 87.947 88.457 0 111 45 4 0 0 0 2.3109E-19 1 48000 90.22 84.378 10 0.74963 0.92139 0 22257000 13308000 8949300 6859 150 3514 3919 11244 11244 229;230;231 YLSADSGDADDSDADLGSAVK 21 1 0 2 Phospho (STY) _YLS(ph)ADS(ph)GDADDSDADLGSAVK_ Y(0.003)LS(0.998)ADS(0.996)GDADDS(0.003)DADLGSAVK Y(-26.29)LS(26.29)ADS(25.24)GDADDS(-25.24)DADLGS(-49.98)AVK 0 0 2 0 B4DZG2;A0A024R8C1;Q15361 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1120.4218 2 1116.41688 2230.81921 58808.96 0.64477 0.00071983 -0.21774 -0.00024309 0.42703 0.00047674 1116.41632893122 1120.92558644693 94.116 0.63953 94.116 93.79 94.429 0 267 55 7 0 0 0 4.4638E-15 2 52455 79.461 70.411 10 0.73727 0.92776 0 51931000 29269000 22662000 6860 150 3514 3919 11245;11246 11246 229;230;231 YLSADSGDADDSDADLGSAVK 21 1 0 3 Phospho (STY) _YLS(ph)ADS(ph)GDADDS(ph)DADLGSAVK_ Y(0.004)LS(0.997)ADS(0.999)GDADDS(0.994)DADLGS(0.006)AVK Y(-24.9)LS(24.9)ADS(30.21)GDADDS(22.25)DADLGS(-22.25)AVK 0 0 3 0 B4DZG2;A0A024R8C1;Q15361 B4DZG2 B4DZG2 TTF1 Transcription termination factor 1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1160.4009 2 1156.40005 2310.78554 NaN NaN NaN NaN NaN NaN NaN NaN NaN 100.24 1 100.24 99.745 100.74 0 0 0 0 1.8973E-07 1 57346 67.11 60.507 10 6861 150 3514 3920 11247 11247 229;230;231 YLSPLGK 7 1 0 Phospho (STY) _YLS(ph)PLGK_ YLS(1)PLGK Y(-63.09)LS(63.09)PLGK 0 0 1 0 H0UIC2;A0A075B754;Q96QE3 H0UIC2 H0UIC2 ATAD5 ATPase family AAA domain-containing protein 5 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 433.2189 2 429.212062 856.409571 93110.85 0.34246 0.00014699 -0.19563 -8.3967E-05 0.14683 6.3023E-05 429.211839657252 433.219013335875 77.275 1.6651 77.275 76.586 78.251 0 405 156 4 0 0 0 0.0061572 1 49357 98.582 33.336 2 4.828 3.3939 0 22667000 4805900 17861000 6862 241 3515 3921 11248 11248 380 YLVDGTKPNAGSEEISSEDDELVEEK 26 2 0 Phospho (STY) _YLVDGTKPNAGSEEIS(ph)SEDDELVEEK_ YLVDGT(0.037)KPNAGS(0.123)EEIS(0.684)S(0.156)EDDELVEEK Y(-32.95)LVDGT(-12.68)KPNAGS(-7.47)EEIS(6.42)S(-6.42)EDDELVEEK 0 0 1 1 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 984.1105 3 978.432294 2932.27505 60092.11 0.87896 0.00086 -0.5923 -0.00057952 0.28666 0.00028048 979.100154681383 984.108950146368 95.693 0.67885 95.693 95.453 96.132 0 242 61 8 0 0 0 1.9959E-17 3 53719 67.413 57.53 5 0.79174 0.98705 0 38480000 18134000 20345000 6863 1223 3516 3922 11249;11250;11251 11251 2480;2481;2482 YLVDGTKPNAGSEEISSEDDELVEEK 26 2 0 3 Phospho (STY) _YLVDGTKPNAGS(ph)EEIS(ph)S(ph)EDDELVEEK_ Y(0.004)LVDGT(0.055)KPNAGS(0.98)EEIS(0.98)S(0.98)EDDELVEEK Y(-31.37)LVDGT(-17.26)KPNAGS(17.26)EEIS(17.26)S(17.26)EDDELVEEK 0 0 3 1 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1032.0793 3 1031.74318 3092.20771 60107.68 1.2206 0.0012594 0.42183 0.00043522 1.6425 0.0016946 1032.07799513994 1037.42075077722 101.98 1.2977 101.98 101.52 102.82 -7.6294E-06 875 103 13 0 0 0 8.1039E-10 1 58981 51.301 44.944 10 0.7241 0.95478 0 282310000 166090000 116220000 6864 1223 3516 3923 11252 11252 2480;2481;2482 YLVIDEAHR 9 0 1 Unmodified _YLVIDEAHR_ 0 0 0 0 B7ZAX9;B4DZC0;O60264;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;D7EZH4;Q4W5H1 B7ZAX9 B7ZAX9 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 375.8687 3 372.532979 1114.57711 99510.57 0.44229 0.00016477 -0.46127 -0.00017184 -0.018978 -7.0701E-06 372.532666522464 375.868706422585 92.628 1.051 92.628 92.37 93.421 0 198 88 5 0 0 0 0.015353 1 51577 37.344 31.04 1 0.57096 0.71513 0 40623000 19944000 20680000 6865 672 3517 3924 11253 11253 YLVIDEAHR 9 0 1 Unmodified _YLVIDEAHR_ 0 0 0 0 B7ZAX9;B4DZC0;O60264;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;D7EZH4;Q4W5H1 B7ZAX9 B7ZAX9 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 563.301 2 558.29583 1114.57711 NaN NaN NaN -0.087599 -4.8906E-05 NaN NaN NaN NaN 92.194 0.37595 92.194 91.913 92.289 0 0 0 0 0.0038977 1 51107 69.825 53.049 1 NaN NaN 0 15873000 0 15873000 6866 672 3517 3924 11254 11254 YLVIDEAHR 9 0 1 Unmodified _YLVIDEAHR_ 0 0 0 0 B7ZAX9;B4DZC0;O60264;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;D7EZH4;Q4W5H1 B7ZAX9 B7ZAX9 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 375.8688 3 372.532979 1114.57711 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.046 1 92.046 91.546 92.546 -7.6294E-06 0 0 0 0.0095678 1 51000 67.897 48.582 1 6867 672 3517 3924 11255 11255 YLVIDEAHR 9 0 1 Unmodified _YLVIDEAHR_ 0 0 0 0 B7ZAX9;B4DZC0;O60264;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;D7EZH4;Q4W5H1 B7ZAX9 B7ZAX9 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 375.2044 3 372.532979 1114.57711 98489.67 -0.39603 -0.00014753 -0.36737 -0.00013686 -0.7634 -0.00028439 372.532746848607 375.868776791577 92.166 0.49146 92.166 91.807 92.299 0 112 44 4 0 0 0 0.028589 1 51109 28.958 20 1 0.62206 0.76712 0 32415000 18477000 13938000 6868 672 3517 3924 11256 11256 YMNSDTTSPELR 12 0 1 Oxidation (M),Phospho (STY) _YM(ox)NSDTT(ph)SPELR_ YM(1)NSDTTSPELR YMNSDT(0.233)T(0.383)S(0.383)PELR YM(98.9)NSDTTSPELR Y(-85.55)MNS(-38.41)DT(-2.16)T(0)S(0)PELR 0 1 1 0 Q96ST3;B3KQE3 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 760.3046 2 755.299996 1508.58544 70636.44 0.84411 0.00063755 -0.16257 -0.00012279 0.68154 0.00051477 755.299872320513 760.304029449961 49.156 1.1763 49.156 48.61 49.786 0 396 92 5 0 0 0 2.2868E-06 2 19286 98.902 85.185 5 0.85282 1.0494 0 23547000 14017000 9529800 6869 1187 3518 3925 11257;11258 11257 329 2339;2975 YMNSDTTSPELR 12 0 1 Oxidation (M),Phospho (STY) _YM(ox)NSDTTS(ph)PELR_ YM(1)NSDTTSPELR YMNSDT(0.068)T(0.068)S(0.865)PELR YM(100.73)NSDTTSPELR Y(-93.6)MNS(-51.1)DT(-11.06)T(-11.06)S(11.06)PELR 0 1 1 0 Q96ST3;B3KQE3 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 760.3047 2 755.299996 1508.58544 69422.16 0.91605 0.00069189 -0.38523 -0.00029096 0.53082 0.00040093 755.299783525425 760.303912382373 38.991 0.72343 38.991 38.627 39.351 0 331 63 8 0 0 0 1.1858E-07 1 22319 100.73 80.207 5 0.6821 0.46919 0 45876000 25574000 20302000 6870 1187 3518 3925 11259 11259 329 2339;2975 YMSPEQISSQDYGK 14 1 0 Oxidation (M),Phospho (STY) _YM(ox)S(ph)PEQISSQDYGK_ YM(1)SPEQISSQDYGK Y(0.014)MS(0.985)PEQISSQDYGK YM(54.9)SPEQISSQDYGK Y(-18.48)MS(18.48)PEQIS(-36.07)S(-35.29)QDY(-48.01)GK 0 1 1 0 B7ZKK7;P19525;Q8IW76 B7ZKK7 B7ZKK7 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 868.8527 2 864.844768 1727.67498 66095.52 0.66881 0.00057842 -0.36425 -0.00031502 0.30456 0.0002634 865.346346307903 868.851030615461 57.824 0.82652 57.824 57.31 58.137 3.8147E-06 211 67 5 0 0 0 0.0024303 1 25342 54.898 48.794 5 1.1236 1.3329 0 10101000 5886100 4215200 6871 720 3519 3926 11260 11260 187 1190 YNGEPEHIER 10 0 1 Unmodified _YNGEPEHIER_ 0 0 0 0 C9JXK0;A0A024R3R5;Q14739 C9JXK0 C9JXK0 LBR Lamin-B receptor MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 418.5304 3 415.194915 1242.56291 94422.55 0.065679 2.7269E-05 -0.084869 -3.5237E-05 -0.01919 -7.9675E-06 415.194863569779 418.530772704489 65.631 0.30983 65.631 65.492 65.802 0 91 23 6 0 0 0 0.015818 2 31654 33.89 23.886 1 1.1854 1.4575 0 27482000 12378000 15104000 6872 79 3520 3927 11261;11262 11262 YNGLIHR 7 0 1 Unmodified _YNGLIHR_ 0 0 0 0 H0YKD8;P46779;H0YLP6;Q59F34;H0YMF4 H0YKD8 H0YKD8 RPL28 60S ribosomal protein L28 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 436.7403 2 436.740494 871.466435 90460.69 0.058492 2.5546E-05 0.003274 1.4299E-06 0.061766 2.6976E-05 436.740436940217 441.74447303234 78.808 1.2518 78.808 78.372 79.623 0 536 112 6 0 0 0 7.2115E-06 1 41726 137.5 119.74 1 0.93286 1.1785 0 136290000 71901000 64390000 6873 860 3521 3928 11263 11263 YNLDASEEEDSNK 13 1 0 Phospho (STY) _YNLDAS(ph)EEEDSNK_ YNLDAS(0.999)EEEDS(0.001)NK Y(-76.13)NLDAS(31.1)EEEDS(-31.1)NK 0 0 1 0 O95218 O95218 O95218 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 801.3089 2 797.301247 1592.58794 69227.68 0.68013 0.00054227 0.46629 0.00037177 1.1464 0.00091404 797.301425103337 801.308789698069 51.328 1.1678 51.328 50.728 51.896 0 539 94 8 0 0 0 2.9448E-06 2 20734 92.265 82.578 3 1.2156 1.4864 0 19489000 9012800 10476000 6874 942 3522 3929 11264;11265 11264 1614 YNLDASEEEDSNK 13 1 0 Phospho (STY) _YNLDAS(ph)EEEDSNK_ YNLDAS(0.994)EEEDS(0.006)NK Y(-59.95)NLDAS(21.85)EEEDS(-21.85)NK 0 0 1 0 O95218 O95218 O95218 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 801.3088 2 797.301247 1592.58794 68704.45 1.0392 0.00082852 0.1015 8.0922E-05 1.1407 0.00090945 797.301242087526 801.308368713982 45.312 0.77378 45.312 44.893 45.666 -3.8147E-06 374 68 7 0 0 0 0.00065263 1 26800 74.853 67.725 3 0.85222 0.57393 0 26516000 12745000 13772000 6875 942 3522 3929 11266 11266 1614 YNLSAGTIK 9 1 0 Phospho (STY) _YNLS(ph)AGTIK_ YNLS(0.927)AGT(0.073)IK Y(-36.95)NLS(11.02)AGT(-11.02)IK 0 0 1 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 523.7493 2 523.74954 1045.48453 84502.41 0.54932 0.0002877 -0.17967 -9.4101E-05 0.36965 0.0001936 523.748960299028 527.756365868933 75.859 0.90285 75.859 75.366 76.269 0 212 78 4 0 0 0 0.019232 1 38970 46.73 33.775 3 0.65294 0.82118 0 28894000 15667000 13227000 6876 1120 3523 3930 11267 11267 2133 YNLSAGTIK 9 1 0 Phospho (STY) _YNLS(ph)AGTIK_ YNLS(0.804)AGT(0.196)IK Y(-36.61)NLS(6.13)AGT(-6.13)IK 0 0 1 0 Q6P0N0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 ISO-MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 527.7568 2 523.74954 1045.48453 NaN NaN NaN -0.4957 -0.00025962 NaN NaN NaN NaN 75.757 0.99437 75.757 75.341 76.335 0 0 0 0 0.016925 1 48133 46.844 30.979 3 NaN NaN 0 6575200 0 6575200 6877 1120 3523 3930 11268 11268 2133 YPIEHGIITNWDDMEK 16 1 0 Oxidation (M) _YPIEHGIITNWDDM(ox)EK_ YPIEHGIITNWDDM(1)EK YPIEHGIITNWDDM(76)EK 0 1 0 0 B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;Q13707;B3KW67;A8K3K1;Q7Z7J6;A6NL76;B4DUI8;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1 B7Z6P1 B7Z6P1 ACTA2;ACTG2;ACTA1;ACTC1 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 662.6467 3 659.640136 1975.89858 74743.07 0.90972 0.00060009 -0.1154 -7.6122E-05 0.79432 0.00052397 659.97439560605 662.311493646951 106.9 1.5126 106.9 106.22 107.74 -7.6294E-06 492 117 7 0 0 0 7.8789E-07 3 62465 75.998 75.998 1 2.0189 2.5455 0 49066000 16157000 32908000 6878 711 3524 3931 11269;11270;11271 11270 183 YPLTVFESR 9 0 1 Phospho (STY) _YPLTVFES(ph)R_ YPLTVFES(1)R Y(-105.03)PLT(-48.48)VFES(48.48)R 0 0 1 0 O96028 O96028 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 MSMS 1 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 601.2797 2 596.275922 1190.53729 NaN NaN NaN NaN NaN NaN NaN NaN NaN 110.68 1 110.68 110.18 111.18 0 0 0 0 0.00010134 1 71187 105.03 88.006 3 6879 953 3525 3932 11272 11272 1655 YPRPASVPPSPSLSR 15 0 2 2 Phospho (STY) _YPRPAS(ph)VPPS(ph)PSLSR_ Y(0.002)PRPAS(0.997)VPPS(0.969)PS(0.025)LS(0.006)R Y(-27.28)PRPAS(27.28)VPPS(15.99)PS(-15.99)LS(-22.55)R 0 0 2 1 B7Z255;B7Z806;B7Z6I6;Q53ER0;A8K6K7;P13807 B7Z255 B7Z255 GYS1 Glycogen [starch] synthase, muscle ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 885.903 2 885.902427 1769.7903 NaN NaN NaN 0.023237 2.0586E-05 NaN NaN NaN NaN 78.418 1.3928 78.418 77.746 79.138 -7.6294E-06 0 0 0 0.00090471 1 41074 50.079 32.86 10 NaN NaN 0 16842000 16842000 0 6880 481 3526 3933 11273 11273 832;833 YPRPASVPPSPSLSR 15 0 2 2 Phospho (STY) _YPRPAS(ph)VPPS(ph)PSLSR_ Y(0.004)PRPAS(0.996)VPPS(0.945)PS(0.028)LS(0.028)R Y(-25.57)PRPAS(25.57)VPPS(15.45)PS(-15.45)LS(-15.45)R 0 0 2 1 B7Z255;B7Z806;B7Z6I6;Q53ER0;A8K6K7;P13807 B7Z255 B7Z255 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 886.4032 2 885.902427 1769.7903 65512.8 1.1443 0.0010138 -0.030215 -2.6767E-05 1.1141 0.000987 885.90233974264 895.911068338457 80.213 2.8033 80.213 78.71 81.514 -7.6294E-06 940 264 6 0 0 0 0.0016276 1 50982 40.962 30.495 10 0.28654 0.24821 0 40117000 29130000 10987000 6881 481 3526 3933 11274 11274 832;833 YQAQSSTEQTLLSPSEK 17 1 0 Phospho (STY) _YQAQSSTEQTLLS(ph)PSEK_ YQAQSSTEQT(0.002)LLS(0.779)PS(0.219)EK Y(-53.47)QAQS(-36.7)S(-35.37)T(-35.37)EQT(-26.17)LLS(5.51)PS(-5.51)EK 0 0 1 0 Q9NT12;Q8WV44 Q9NT12 Q9NT12 DKFZp434N1710;TRIM41 E3 ubiquitin-protein ligase TRIM41 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 993.4533 2 988.946067 1975.87758 63925.82 0.56386 0.00055763 -0.096969 -9.5897E-05 0.46689 0.00046173 989.447524183517 993.453996699389 75.821 0.53394 75.821 75.519 76.053 0 128 46 4 0 0 0 6.4856E-05 2 39039 56.339 46.681 7 0.94622 1.1767 0 25131000 12635000 12495000 6882 1165 3527 3934 11275;11276 11275 2249 YQAVTATLEEK 11 1 0 Unmodified _YQAVTATLEEK_ 0 0 0 0 Q9BSQ6;Q5QTS3;Q53H34;M0QYS1;P40429;Q8J015;Q6NVV1 Q9BSQ6 Q9BSQ6 RPL13A;RPL13a;RPL13AP3 60S ribosomal protein L13a;Putative 60S ribosomal protein L13a protein RPL13AP3 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 630.832 2 626.824618 1251.63468 NaN NaN NaN NaN NaN NaN NaN NaN NaN 75.422 1 75.422 74.922 75.922 0 0 0 0 0.0083369 1 38819 51.092 20.838 1 6883 910 3528 3935 11277 11277 YQKSTELLIR 10 1 1 Unmodified _YQKSTELLIR_ 0 0 0 1 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 424.2433 3 417.574955 1249.70304 94973.84 0.26863 0.00011217 -0.44867 -0.00018736 -0.18004 -7.518E-05 417.574676233974 423.582247149348 106.28 0.90518 106.28 105.91 106.82 0 218 63 5 0 0 0 0.032389 1 61761 31.185 31.185 1 0.77138 0.86225 0 17088000 8875400 8213000 6884 527;1108 3529 3936 11278 11278 YQPLASTASDNDFVTPEPR 19 0 1 Phospho (STY) _YQPLASTAS(ph)DNDFVTPEPR_ YQPLAS(0.005)T(0.03)AS(0.965)DNDFVTPEPR Y(-59.68)QPLAS(-22.54)T(-15.14)AS(15.14)DNDFVT(-41.79)PEPR 0 0 1 0 Q15021;B4E0B7;B3KMS0;B3KY03 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1094.9901 2 1094.48335 2186.95214 57538.48 0.65367 0.00071543 0.12861 0.00014076 0.78228 0.0008562 1094.9850331927 1099.48732697792 103.39 1.2022 103.39 102.8 104.01 -7.6294E-06 635 85 11 0 0 0 3.5108E-19 3 59436 100.77 83.073 5 0.75641 0.95669 0 261870000 151280000 110590000 6885 1067 3530 3937 11279;11280;11281 11280 2011;2930 YQPLASTASDNDFVTPEPR 19 0 1 Phospho (STY) _YQPLASTASDNDFVT(ph)PEPR_ YQPLAS(0.01)T(0.013)AS(0.15)DNDFVT(0.827)PEPR Y(-33.47)QPLAS(-19.1)T(-17.91)AS(-7.42)DNDFVT(7.42)PEPR 0 0 1 0 Q15021;B4E0B7;B3KMS0;B3KY03 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1094.4817 2 1094.48335 2186.95214 NaN NaN NaN NaN NaN NaN NaN NaN NaN 98.214 1 98.214 97.714 98.714 0 0 0 0 0.016363 1 55744 40.349 26.092 5 6886 1067 3530 3937 11282 11282 2011;2930 YQPLASTASDNDFVTPEPR 19 0 1 2 Phospho (STY) _YQPLASTAS(ph)DNDFVT(ph)PEPR_ YQPLAS(0.031)T(0.036)AS(0.933)DNDFVT(1)PEPR Y(-50.55)QPLAS(-14.77)T(-14.12)AS(14.12)DNDFVT(43.15)PEPR 0 0 2 0 Q15021;B4E0B7;B3KMS0;B3KY03 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1139.474 2 1134.46651 2266.91847 56711.18 0.36358 0.00041247 0.54355 0.00061664 0.90713 0.0010291 1134.96814791864 1140.4735368549 103.74 0.18129 103.74 103.58 103.76 0 84 14 8 0 0 0 1.7015E-10 2 59898 80.238 64.845 10 1.0346 1.2719 0 28256000 14476000 13780000 6887 1067 3530 3938 11283;11284 11283 2011;2930 YQPLASTASDNDFVTPEPR 19 0 1 2 Phospho (STY) _YQPLASTAS(ph)DNDFVT(ph)PEPR_ Y(0.001)QPLAS(0.285)T(0.32)AS(0.404)DNDFVT(0.991)PEPR Y(-26.84)QPLAS(-1.54)T(-1.04)AS(1.04)DNDFVT(20.96)PEPR 0 0 2 0 Q15021;B4E0B7;B3KMS0;B3KY03 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1134.9683 2 1134.46651 2266.91847 57684.36 0.30382 0.00034467 0.23204 0.00026324 0.53586 0.00060791 1134.96810841624 1139.47136999312 104.05 0.76179 104.05 103.75 104.51 7.6294E-06 361 55 10 0 0 0 7.6845E-05 1 60242 46.131 36.209 10 1.0229 1.2911 0 82986000 40911000 42076000 6888 1067 3530 3938 11285 11285 2011;2930 YRPDLR 6 0 2 Unmodified _YRPDLR_ 0 0 0 1 H0YKD8;P46779;O60251 H0YKD8 H0YKD8 RPL28 60S ribosomal protein L28 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 410.2273 2 410.22722 818.439886 92961.93 0.07509 3.0804E-05 0.11985 4.9167E-05 0.19494 7.9971E-05 410.227268600432 420.2353072304 78.013 1.7196 78.013 77.354 79.074 0 686 154 7 0 0 0 6.5171E-05 1 40798 129.96 41.227 1 0.85375 1.0716 0 736150000 406480000 329670000 6889 860 3531 3939 11286 11286 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 0 1 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;A8K4Y7;Q6TXQ4;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 526.8094 2 516.801083 1031.58761 82642.08 0.40319 0.00020837 -0.28111 -0.00014528 0.12209 6.3096E-05 516.801309761985 526.809050218423 88.03 5.7104 88.03 84.794 90.505 -7.6294E-06 3718 527 9 0 0 0 0.00073523 11 48771 73.233 49.805 1 0.72295 0.91562 0 6390200000 3715000000 2675200000 6890 527;1108 3532 3940 11287;11288;11289;11290;11291;11292;11293;11294;11295;11296;11297 11295 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 0 1 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;A8K4Y7;Q6TXQ4;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 344.8698 3 344.869814 1031.58761 100261.4 -0.1729 -5.9627E-05 -0.33079 -0.00011408 -0.50369 -0.00017371 344.869958970309 351.542026238211 87.933 4.221 87.933 86.284 90.505 0 1823 383 7 0 0 0 8.258E-05 11 48660 111.95 77.694 1 0.74058 0.93466 0 2738400000 1468500000 1270000000 6891 527;1108 3532 3940 11298;11299;11300;11301;11302;11303;11304;11305;11306;11307;11308 11305 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 0 1 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;A8K4Y7;Q6TXQ4;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 526.8094 2 516.801083 1031.58761 83162.96 0.92371 0.00047738 0.014241 7.3597E-06 0.93795 0.00048474 516.80130063246 526.809252480708 90.562 0.55167 90.562 90.505 91.056 0 328 49 8 0 0 0 0.027371 1 49901 52.716 29.288 1 0.69477 0.87746 0 3244500000 1885300000 1359100000 6892 527;1108 3532 3940 11309 11309 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 0 1 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;A8K4Y7;Q6TXQ4;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 351.5425 3 344.869814 1031.58761 100261.5 0.35116 0.0001211 0.23519 8.1112E-05 0.58635 0.00020222 344.869974079754 351.542031462133 90.559 0.96325 90.559 90.444 91.407 0 271 84 7 0 0 0 0.0044789 1 50130 71.349 50.479 1 0.72162 0.90763 0 1208300000 683500000 524820000 6893 527;1108 3532 3940 11310 11310 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 0 1 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;A8K4Y7;Q6TXQ4;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 344.87 3 344.869814 1031.58761 100980.5 0.47793 0.00016482 0.28327 9.7692E-05 0.7612 0.00026252 344.869894521829 351.542016272231 91.107 0.65453 91.107 91.036 91.691 0 224 54 5 0 0 0 0.00011013 1 50367 99.139 64.886 1 0.67823 0.85136 0 745690000 425650000 320040000 6894 527;1108 3532 3940 11311 11311 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 0 1 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;A8K4Y7;Q6TXQ4;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 526.8098 2 516.801083 1031.58761 82642.11 1.0076 0.00052072 0.06992 3.6135E-05 1.0775 0.00055685 516.80121448612 526.809280688598 91.118 1.3112 91.118 91.036 92.348 0 455 112 9 0 0 0 0.0068998 2 50477 68.224 47.703 1 0.67313 0.84811 0 1834400000 1106000000 728360000 6895 527;1108 3532 3940 11312;11313 11313 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 0 1 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;A8K4Y7;Q6TXQ4;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 351.5417 3 344.869814 1031.58761 100980.4 -0.29464 -0.00010161 -0.12848 -4.4308E-05 -0.42311 -0.00014592 344.869626039923 351.541891654711 91.747 0.45219 91.747 91.65 92.102 0 116 37 5 0 0 0 0.0021024 1 50754 76.064 58.245 1 0.68067 0.84674 0 84758000 51569000 33189000 6896 527;1108 3532 3940 11314 11314 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 0 1 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;A8K4Y7;Q6TXQ4;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 516.8019 2 516.801083 1031.58761 85019.98 0.65423 0.00033811 0.070075 3.6215E-05 0.72431 0.00037432 516.801040085038 526.809252849155 92.447 0.97343 92.447 92.279 93.253 0 271 84 5 0 0 0 0.030253 1 51547 53.327 28.404 1 0.68936 0.85805 0 97817000 55912000 41905000 6897 527;1108 3532 3940 11315 11315 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 0 1 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;A8K4Y7;Q6TXQ4;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 526.8096 2 516.801083 1031.58761 84554.38 0.6799 0.00035137 0.47391 0.00024492 1.1538 0.00059629 516.801359431801 526.809445662413 93.645 1.317 93.645 93.421 94.738 0 256 107 4 0 0 0 0.022421 1 52602 56.258 36.472 1 0.69834 0.86733 0 57736000 35546000 22190000 6898 527;1108 3532 3940 11316 11316 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 0 1 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;A8K4Y7;Q6TXQ4;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 526.8094 2 516.801083 1031.58761 84586.44 0.36134 0.00018674 0.049556 2.561E-05 0.41089 0.00021235 516.80102916357 526.80926039412 110.19 2.9438 110.19 108.44 111.38 0 681 242 4 0 0 0 0.026615 2 64278 53.166 34.384 1 0.72236 0.89606 0 42904000 27409000 15495000 6899 527;1108 3532 3940 11317;11318 11317 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 0 1 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;A8K4Y7;Q6TXQ4;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 516.8012 2 516.801083 1031.58761 82542.44 0.26806 0.00013853 0.098074 5.0685E-05 0.36613 0.00018922 516.801082481014 526.809289028983 145.88 0.69347 145.88 145.41 146.1 0 132 34 7 0 0 0 0.0075 1 84116 69.598 44.675 1 0.70221 0.85678 0 21166000 11791000 9375100 6900 527;1108 3532 3940 11319 11319 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 0 1 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;A8K4Y7;Q6TXQ4;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C ISO-MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 344.87 3 344.869814 1031.58761 NaN NaN NaN 0.43927 0.00015149 NaN NaN NaN NaN 93.746 0.69637 93.746 93.356 94.053 0 0 0 0 0.0321 1 52329 53.751 34.264 1 NaN NaN 0 12535000 12535000 0 6901 527;1108 3532 3940 11320 11320 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 0 1 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;A8K4Y7;Q6TXQ4;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 344.8698 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 83.546 1 83.546 83.046 84.046 0 0 0 0 0.0023633 1 44850 61.679 45.476 1 6902 527;1108 3532 3940 11321 11321 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 0 1 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;A8K4Y7;Q6TXQ4;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 351.5413 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 85.611 1 85.611 85.111 86.111 0 0 0 0 0.0031329 1 46238 54.982 38.779 1 6903 527;1108 3532 3940 11322 11322 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 0 1 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;A8K4Y7;Q6TXQ4;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 344.8694 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.038 1 92.038 91.538 92.538 0 0 0 0 0.00079473 1 50991 76.679 45.45 1 6904 527;1108 3532 3940 11323 11323 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 0 1 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;A8K4Y7;Q6TXQ4;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 351.5415 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.494 1 92.494 91.994 92.994 0 0 0 0 0.0011087 1 51323 73.985 52.521 1 6905 527;1108 3532 3940 11324 11324 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 0 1 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;A8K4Y7;Q6TXQ4;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 344.8699 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 92.812 1 92.812 92.312 93.312 0 0 0 0 0.00077751 1 51569 76.827 46.09 1 6906 527;1108 3532 3940 11325 11325 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 0 1 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;A8K4Y7;Q6TXQ4;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 344.86 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.022 1 96.022 95.522 96.522 0 0 0 0 0.007847 1 54045 46.39 30.187 1 6907 527;1108 3532 3940 11326 11326 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 0 1 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;A8K4Y7;Q6TXQ4;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 344.8701 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 96.17 1 96.17 95.67 96.67 0 0 0 0 0.015714 1 54157 39.305 23.102 1 6908 527;1108 3532 3940 11327 11327 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 0 1 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;A8K4Y7;Q6TXQ4;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 516.8013 2 516.801083 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.694 1 99.694 99.194 100.19 0 0 0 0 0.024533 1 56901 50.607 15.799 1 6909 527;1108 3532 3940 11328 11328 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 0 1 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;A8K4Y7;Q6TXQ4;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 351.8762 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 108 1 108 107.5 108.5 0 0 0 0 0.0058391 1 63197 49.715 35.508 1 6910 527;1108 3532 3940 11329 11329 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 0 1 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;A8K4Y7;Q6TXQ4;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 517.2479 2 516.801083 1031.58761 84554.43 0.81668 0.00042206 1.0132 0.00052363 1.8299 0.00094569 516.801732710623 526.809627123124 93.336 0.38889 93.336 93.133 93.522 0 75 30 4 0 0 0 0.032712 1 51934 46.158 21.235 1 0.77292 0.95933 0 49229000 25122000 24107000 6911 527;1108 3532 3940 11330 11330 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 0 1 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;A8K4Y7;Q6TXQ4;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 344.8698 3 344.869814 1031.58761 103280.2 0.46397 0.00016001 -0.47667 -0.00016439 -0.012697 -4.3787E-06 344.869618450631 351.541799664072 33.269 1.3609 33.269 32.702 34.063 0 291 104 4 0 0 0 0.019604 1 17997 49.715 35.049 1 0.85757 0.74298 0 11549000 5574700 5974700 6912 527;1108 3532 3940 11331 11331 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 0 1 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;A8K4Y7;Q6TXQ4;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 516.8013 2 516.801083 1031.58761 84201.17 0.83865 0.00043341 -0.026077 -1.3477E-05 0.81257 0.00041994 516.800949688107 526.809324228138 33.306 2.723 33.306 32.626 35.349 0 813 213 6 0 0 0 0.032461 1 18009 52.482 29.053 1 0.87096 0.75388 0 34593000 18514000 16080000 6913 527;1108 3532 3940 11332 11332 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 0 1 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;A8K4Y7;Q6TXQ4;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 344.8694 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 35.365 1 35.365 34.865 35.865 0 0 0 0 0.031671 1 19775 30.797 21.209 1 6914 527;1108 3532 3940 11333 11333 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 0 1 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;A8K4Y7;Q6TXQ4;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 344.8699 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 39.294 1 39.294 38.794 39.794 0 0 0 0 0.027745 1 22690 32.415 23.201 1 6915 527;1108 3532 3940 11334 11334 YRPGTVALR 9 0 2 Unmodified _YRPGTVALR_ 0 0 0 1 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;K7ES00;Q6NXT2;K7EP01;A8K4Y7;Q6TXQ4;Q5TEC6 B4E380;Q5TEC6 Q5TEC6 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 344.8694 3 344.869814 1031.58761 NaN NaN NaN NaN NaN NaN NaN NaN NaN 40.078 1 40.078 39.578 40.578 0 0 0 0 0.02088 1 23254 35.269 24.559 1 6916 527;1108 3532 3940 11335 11335 YRTEAHQDVVGR 12 0 2 Unmodified _YRTEAHQDVVGR_ 0 0 0 1 Q05CW7;E9PMU0;Q9H0A0;A0A087WV29 Q05CW7;Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 477.5765 3 477.576018 1429.70622 88443.8 0.29834 0.00014248 -0.092485 -4.4169E-05 0.20585 9.8311E-05 477.575972446007 484.248195812976 82.758 1.4017 82.758 82.193 83.595 0 589 130 9 0 0 0 0.0049544 2 44087 71.888 64.164 1 0.85322 1.0674 0 329070000 177060000 152010000 6917 1202;1038 3533 3941 11336;11337 11336 YSEEGLSPSK 10 1 0 Phospho (STY) _YSEEGLS(ph)PSK_ YSEEGLS(0.834)PS(0.166)K Y(-113.98)S(-91.62)EEGLS(7.01)PS(-7.01)K 0 0 1 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 588.7443 2 588.744651 1175.47475 80208.24 0.75615 0.00044518 0.11484 6.7609E-05 0.87099 0.00051279 588.744569543879 592.751706807092 47.101 1.0462 47.101 46.591 47.638 0 366 69 8 0 0 0 1.7093E-06 3 17863 117.09 89.078 4 0.92932 1.1365 0 19563000 9693400 9869700 6918 829 3534 3942 11338;11339;11340 11339 1431 YSEEGLSPSK 10 1 0 Phospho (STY) _YSEEGLS(ph)PSK_ YSEEGLS(0.826)PS(0.174)K Y(-91.84)S(-84.48)EEGLS(6.76)PS(-6.76)K 0 0 1 0 J3QK86;J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9 J3QK86 J3QK86 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 588.7454 2 588.744651 1175.47475 78564.56 0.77911 0.0004587 0.18675 0.00010995 0.96586 0.00056865 588.744815644678 592.751822039825 36.843 0.74785 36.843 36.529 37.276 0 338 63 9 0 0 0 2.4153E-05 2 20791 95.094 76.116 4 2.1661 1.4206 0 52201000 17679000 34522000 6919 829 3534 3942 11341;11342 11342 1431 YSGAYGASVSDEELK 15 1 0 Phospho (STY) _YS(ph)GAYGASVSDEELK_ YS(1)GAYGASVSDEELK Y(-53.54)S(53.54)GAY(-80.31)GAS(-97.45)VS(-115.43)DEELK 0 0 1 0 B7Z1X9;A4D1N4;C9JRZ6;F8WAR4;Q9NX63 B7Z1X9 B7Z1X9 CHCHD3 MICOS complex subunit MIC19 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 828.3458 2 828.345458 1654.67636 67938.88 0.8554 0.00070857 -0.13349 -0.00011058 0.72191 0.00059799 828.344745229317 832.352698330973 77.279 1.1176 77.279 76.803 77.92 7.6294E-06 385 98 6 0 0 0 3.0606E-28 3 40186 136.39 122.1 5 1.0375 1.3064 0 50903000 22797000 28105000 6920 414 3535 3943 11343;11344;11345 11344 708 YSGAYGASVSDEELK 15 1 0 Phospho (STY) _YS(ph)GAYGASVSDEELK_ Y(0.107)S(0.872)GAY(0.02)GAS(0.001)VSDEELK Y(-9.09)S(9.09)GAY(-16.43)GAS(-29.73)VS(-41.07)DEELK 0 0 1 0 B7Z1X9;A4D1N4;C9JRZ6;F8WAR4;Q9NX63 B7Z1X9 B7Z1X9 CHCHD3 MICOS complex subunit MIC19 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 828.3465 2 828.345458 1654.67636 68970.74 1.1237 0.00093084 -0.030535 -2.5294E-05 1.0932 0.00090555 828.34563952273 832.352434543718 79.978 0.82191 79.978 79.731 80.552 7.6294E-06 322 78 5 0 0 0 0.0014895 1 51218 44.294 34.341 5 1.439 1.076 0 18909000 7052300 11857000 6921 414 3535 3943 11346 11346 708 YSGPAPPPNR 10 0 1 Phospho (STY) _YS(ph)GPAPPPNR_ Y(0.133)S(0.867)GPAPPPNR Y(-8.14)S(8.14)GPAPPPNR 0 0 1 0 A8K4Z6;Q9BRD0 A8K4Z6 A8K4Z6 BUD13 BUD13 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 568.2502 2 568.250238 1134.48592 81604.57 0.55979 0.0003181 0.11804 6.7075E-05 0.67783 0.00038518 568.250119046567 573.254412004727 42.242 1.0575 42.242 41.724 42.781 0 343 82 6 0 0 0 0.022488 1 15064 41.399 36.884 2 0.66053 0.72283 0 6185700 3842400 2343300 6922 468 3536 3944 11347 11347 817 YSGPEDDAAISLAFSK 16 1 0 Phospho (STY) _YS(ph)GPEDDAAISLAFSK_ Y(0.021)S(0.979)GPEDDAAISLAFSK Y(-16.68)S(16.68)GPEDDAAIS(-61.65)LAFS(-74.47)K 0 0 1 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 875.8831 2 875.882207 1749.74986 66719.45 0.75543 0.00066167 0.13229 0.00011587 0.88772 0.00077753 875.882254366424 880.390456243719 116.54 0.47379 116.54 116.3 116.78 0 151 41 5 0 0 0 2.2937E-06 3 69622 75.911 69.939 4 0.64518 0.77026 0 13033000 7080100 5953300 6923 962 3537 3945 11348;11349;11350 11349 1708 YSGPEDDAAISLAFSK 16 1 0 Unmodified _YSGPEDDAAISLAFSK_ 0 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 835.8996 2 835.899042 1669.78353 NaN NaN NaN NaN NaN NaN NaN NaN NaN 111.07 1 111.07 110.57 111.57 0 0 0 0 0.00033279 1 65668 57.136 40.504 1 6924 962 3537 3946 11351 11351 YSGPEDDAAISLAFSK 16 1 0 Unmodified _YSGPEDDAAISLAFSK_ 0 0 0 0 P11388 P11388 P11388 TOP2A DNA topoisomerase 2-alpha MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 839.9081 2 835.899042 1669.78353 69045.59 1.1962 0.00099994 0.045189 3.7773E-05 1.2414 0.0010377 835.898834219126 839.90621929342 112.85 0.73067 112.85 112.51 113.24 0 173 67 5 0 0 0 0.0045288 1 72549 40.552 40.552 1 1.4719 1.1223 0 7773400 3306500 4466900 6925 962 3537 3946 11352 11352 YSGSYNDYLR 10 0 1 Phospho (STY) _YS(ph)GSYNDYLR_ Y(0.029)S(0.969)GS(0.001)YNDYLR Y(-15.21)S(15.21)GS(-28.75)Y(-47.07)NDY(-63.05)LR 0 0 1 0 A0A0S2Z4Z0;Q96PK6;B4DNG4 A0A0S2Z4Z0 A0A0S2Z4Z0 RBM14 RNA-binding protein 14 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 664.2654 2 659.261 1316.50745 NaN NaN NaN NaN NaN NaN NaN NaN NaN 79.981 1 79.981 79.481 80.481 7.6294E-06 0 0 0 0.0017017 1 42272 68.536 49.805 5 6926 354 3538 3947 11353 11353 560 YSHSYLSDSDTEAK 14 1 0 2 Phospho (STY) _YSHSYLS(ph)DS(ph)DTEAK_ YSHS(0.001)Y(0.008)LS(0.864)DS(0.905)DT(0.222)EAK Y(-57.85)S(-52.31)HS(-32.12)Y(-23.24)LS(7.67)DS(9.32)DT(-7.67)EAK 0 0 2 0 Q9NYE8;B3KVF8;B4DFN7;B4DZ32;B4DYM1;A0A0D9SFK2;A0A024QZ63;Q92614 Q9NYE8 Q9NYE8 MAJN;hCG_27198;MYO18A Unconventional myosin-XVIIIa MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 881.8163 2 881.81588 1761.61721 64925.76 0.83407 0.0007355 -0.29219 -0.00025765 0.54188 0.00047784 881.816010193866 885.822120746509 60.563 0.90176 60.563 60.048 60.95 -3.8147E-06 314 63 7 0 0 0 0.00070223 2 27397 69.716 62.588 21 1.3449 1.7045 0 33387000 17060000 16326000 6927 7 3539 3948 11354;11355 11354 7;8 YSPPAISPLVSEK 13 1 0 Phospho (STY) _YS(ph)PPAISPLVSEK_ Y(0.426)S(0.573)PPAISPLVSEK Y(-1.29)S(1.29)PPAIS(-34.45)PLVS(-40.55)EK 0 0 1 0 Q14694 Q14694 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 734.362 2 734.360183 1466.70581 72402.52 1.1789 0.00086576 0.79553 0.00058421 1.9745 0.00145 734.360628793673 738.36803186113 115.13 0.7374 115.13 114.84 115.58 -7.6294E-06 213 66 6 0 0 0 0.010569 1 74176 40.552 34.449 4 1.4009 1.0461 0 9578900 4280000 5298800 6928 1063 3540 3949 11356 11356 2000 YSPSQNSPIHHIPSR 15 0 1 2 Phospho (STY) _YS(ph)PSQNS(ph)PIHHIPSR_ Y(0.098)S(0.902)PS(0.022)QNS(0.977)PIHHIPSR Y(-9.61)S(9.61)PS(-16.31)QNS(16.31)PIHHIPS(-34.91)R 0 0 2 0 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09;E9PJA7;H0YF00 Q6DCA8 Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 630.6044 3 627.267785 1878.78153 76061.83 0.48829 0.00030629 0.0091288 5.7262E-06 0.49742 0.00031201 627.26766919825 630.603792750631 68.519 1.9649 68.519 67.344 69.309 0 718 178 6 0 0 0 0.0002719 2 33863 69.122 64.922 10 1.1959 1.51 0 98252000 47985000 50268000 6929 809 3541 3950 11357;11358 11358 1401;1402 YSSEVATESPLDFTK 15 1 0 Phospho (STY) _YSSEVATES(ph)PLDFTK_ YSSEVATES(0.992)PLDFT(0.008)K Y(-137.45)S(-123.61)S(-107.96)EVAT(-37.84)ES(21.18)PLDFT(-21.18)K 0 0 1 0 A8K905;Q8WTT2 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 877.3828 2 877.38204 1752.74953 65005.06 0.70405 0.00061772 0.38446 0.00033731 1.0885 0.00095504 877.382736849344 881.3894319233 104.14 1.5011 104.14 103.13 104.63 0 591 110 8 0 0 0 2.3273E-62 3 60455 166.79 151.63 6 1.0019 1.256 0 58890000 31142000 27748000 6930 498 3542 3951 11359;11360;11361 11361 854 YSSEVATESPLDFTK 15 1 0 Phospho (STY) _YSSEVATES(ph)PLDFTK_ YSSEVAT(0.003)ES(0.97)PLDFT(0.027)K Y(-79.37)S(-74.01)S(-66.11)EVAT(-25.88)ES(15.51)PLDFT(-15.51)K 0 0 1 0 A8K905;Q8WTT2 A8K905 A8K905 NOC3L Nucleolar complex protein 3 homolog MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 877.3831 2 877.38204 1752.74953 65631.92 1.1359 0.0009966 -0.47795 -0.00041934 0.65793 0.00057726 877.381215784558 881.388160318638 109.62 0.98132 109.62 109.19 110.17 0 514 96 8 0 0 0 1.9627E-06 1 70486 86.539 86.539 6 1.0241 0.70539 0 24367000 12007000 12360000 6931 498 3542 3951 11362 11362 854 YSSSFCTHDR 10 0 1 Unmodified _YSSSFCTHDR_ 0 0 0 0 K7ENW5;K7ES52;K7ERJ1;B5BUF9;B5BU32;K7ERV3;P04183;A0A024R8N6 K7ENW5 K7ENW5 TK1 Thymidine kinase;Thymidine kinase, cytosolic MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 635.2634 2 630.259119 1258.50368 79489.91 0.54104 0.00034099 -0.12657 -7.9773E-05 0.41447 0.00026122 630.258845028814 635.263160188465 66.866 0.22186 66.866 66.784 67.006 0 46 15 5 0 0 0 0.0011274 1 32723 87.913 33.708 1 2.6445 3.1831 0 18412000 4915800 13496000 6932 689 3543 3952 11363 11363 YSVDIPLDK 9 1 0 Unmodified _YSVDIPLDK_ 0 0 0 0 E4W6B6;B2R4D8;A0A024R1V4;K7ELC7;P61353;K7EQQ9 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 529.2868 2 525.279315 1048.54408 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.016 1 99.016 98.516 99.516 0 0 0 0 0.022114 1 56387 46.158 22.003 1 6933 53 3544 3953 11364 11364 YSVDIPLDK 9 1 0 Unmodified _YSVDIPLDK_ 0 0 0 0 E4W6B6;B2R4D8;A0A024R1V4;K7ELC7;P61353;K7EQQ9 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MSMS 0 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 525.2781 2 525.279315 1048.54408 NaN NaN NaN NaN NaN NaN NaN NaN NaN 99.053 1 99.053 98.553 99.553 0 0 0 0 0.0047784 1 56416 67.897 11.995 1 6934 53 3544 3953 11365 11365 YSVDIPLDK 9 1 0 Unmodified _YSVDIPLDK_ 0 0 0 0 E4W6B6;B2R4D8;A0A024R1V4;K7ELC7;P61353;K7EQQ9 E4W6B6 E4W6B6 RPL27 60S ribosomal protein L27 MSMS 0 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 525.2795 2 525.279315 1048.54408 NaN NaN NaN NaN NaN NaN NaN NaN NaN 95.153 1 95.153 94.653 95.653 7.6294E-06 0 0 0 0.019699 1 61259 47.603 12.795 1 6935 53 3544 3953 11366 11366 YSVLNNDDYFADVSPLR 17 0 1 Phospho (STY) _YSVLNNDDYFADVS(ph)PLR_ YSVLNNDDYFADVS(1)PLR Y(-139.01)S(-137.61)VLNNDDY(-83.06)FADVS(83.06)PLR 0 0 1 0 Q1ED39;H3BMC9 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 1039.4608 2 1034.4566 2066.89865 59772.04 0.65116 0.0006736 0.0066051 6.8327E-06 0.65776 0.00068043 1034.95828145985 1039.96210554274 123.53 0.86744 123.53 123.16 124.02 0 606 77 11 0 0 0 1.5901E-43 2 74862 144.5 120.21 4 0.83944 1.0608 0 162090000 88208000 73883000 6936 1082 3545 3954 11367;11368 11367 2039 YSVLNNDDYFADVSPLR 17 0 1 Phospho (STY) _YSVLNNDDYFADVS(ph)PLR_ YSVLNNDDYFADVS(1)PLR Y(-72.73)S(-70.14)VLNNDDY(-61)FADVS(61)PLR 0 0 1 0 Q1ED39;H3BMC9 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 MULTI-MSMS 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 1039.962 2 1034.4566 2066.89865 59392.77 0.50623 0.00052367 0.42419 0.0004388 0.93042 0.00096248 1034.95872625551 1039.46130111015 132.28 1.0809 132.28 131.96 133.04 0 719 102 13 0 0 0 1.2087E-06 1 85203 75.682 69.65 4 2.1658 1.4252 0 286980000 87960000 199020000 6937 1082 3545 3954 11369 11369 2039 YTEGVQSLNWTK 12 1 0 Phospho (STY) _YTEGVQSLNWT(ph)K_ YTEGVQSLNWT(1)K Y(-182.48)T(-168.34)EGVQS(-40.8)LNWT(40.8)K 0 0 1 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 753.3377 2 753.337239 1504.65992 69657.64 0.55188 0.00041575 0.057354 4.3207E-05 0.60924 0.00045896 753.336851762129 757.344538654561 92.085 1.1633 92.085 91.588 92.751 0 436 102 6 0 0 0 2.3377E-78 4 51289 188.12 167.34 4 0.50055 0.6258 0 64829000 41295000 23535000 6938 1254 3546 3955 11370;11371;11372;11373 11372 3007 YTQVGPDHNR 10 0 1 Unmodified _YTQVGPDHNR_ 0 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 598.7888 2 593.783619 1185.55268 78071.3 0.80483 0.0004779 0.62149 0.00036903 1.4263 0.00084692 593.783809341761 598.787858515309 60.648 0.57985 60.648 60.418 60.998 0 158 40 6 0 0 0 0.001225 2 27600 81.95 81.95 1 1.2228 1.5383 0 46034000 21176000 24858000 6939 1040 3547 3956 11374;11375 11375 YTQVGPDHNR 10 0 1 Unmodified _YTQVGPDHNR_ 0 0 0 0 Q08211;Q58F26;Q6PJK6 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 396.1919 3 396.191504 1185.55268 94500.03 -0.19058 -7.5507E-05 0.41234 0.00016336 0.22175 8.7856E-05 396.191670177531 399.527648644864 60.656 0.64026 60.656 60.385 61.025 0 211 44 8 0 0 0 4.3367E-05 3 27599 90.696 85.902 1 1.2903 1.629 0 95709000 42237000 53472000 6940 1040 3547 3956 11376;11377;11378 11376 YVASYLLAALGGNSSPSAK 19 1 0 Phospho (STY) _YVASYLLAALGGNS(ph)SPSAK_ YVASYLLAALGGNS(0.447)S(0.447)PS(0.106)AK Y(-97.01)VAS(-85.21)Y(-89.54)LLAALGGNS(0)S(0)PS(-6.23)AK 0 0 1 0 A0A024RCA7;P05387 A0A024RCA7 A0A024RCA7 RPLP2 60S acidic ribosomal protein P2 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 974.9741 2 974.974431 1947.93431 61797.04 0.51257 0.00049974 0.24975 0.0002435 0.76232 0.00074324 975.47602839917 978.98159070202 132.07 0.84554 132.07 131.7 132.55 0 479 73 8 0 0 0 8.85E-22 3 80207 101.9 90.991 6 0.99797 1.2652 0 41895000 21779000 20116000 6941 208 3548 3957 11379;11380;11381 11381 322;323 YVELFLNSTAGASGGAYEHR 20 0 1 Unmodified _YVELFLNSTAGASGGAYEHR_ 0 0 0 0 G8JLB6;P31943;H0YB39 G8JLB6 G8JLB6 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed ISO-MSMS 1 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 718.3511 3 714.67987 2141.01778 NaN NaN NaN 0.53802 0.00038451 NaN NaN NaN NaN 133.1 0.28995 133.1 132.97 133.26 0 0 0 0 2.393E-10 2 80964 72.421 55.14 1 NaN NaN 0 3096400 0 3096400 6942 844 3549 3958 11382;11383 11383 YYPTEDVPRK 10 1 1 Unmodified _YYPTEDVPRK_ 0 0 0 1 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;F8VR69;F8VZ45;U3KQR5 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 423.2155 3 423.215427 1266.62445 91091.61 0.054747 2.317E-05 0.30434 0.0001288 0.35908 0.00015197 423.215580478848 429.223004515298 74.756 1.3051 74.756 74.249 75.554 0 577 115 8 0 0 0 9.7877E-07 2 38260 79.427 65.519 1 0.86671 1.039 0 135300000 70549000 64748000 6943 199 3550 3959 11384;11385 11384 YYPTEDVPRK 10 1 1 Unmodified _YYPTEDVPRK_ 0 0 0 1 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;F8VR69;F8VZ45;U3KQR5 Q8TBK5 Q8TBK5 RPL6 60S ribosomal protein L6 MULTI-SECPEP 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 634.7891 2 634.319502 1266.62445 77279.85 0.80554 0.00051097 -0.29805 -0.00018906 0.50749 0.00032191 634.3194200266 643.330310092883 74.802 1.0293 74.802 74.417 75.446 0 423 91 7 0 0 0 0.016185 1 38522 39.148 30.194 1 0.8814 1.0476 0 70147000 39531000 30616000 6944 199 3550 3959 11386 11386 YYVTIIDAPGHR 12 0 1 Unmodified _YYVTIIDAPGHR_ 0 0 0 0 A0A087WV01;Q9H2I7;Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q53GE9;Q53GA1;Q5VTE0;P68104;A9X7H1;Q96RE1;B4DV42;Q9NZS6;A0A087WVQ9;Q53G85;A8K9C4;B4DNE0;Q16577;A6PW80;Q5JR01 A0A087WV01 A0A087WV01 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 472.2501 3 468.91386 1403.71975 88177.85 0.24964 0.00011706 -0.14689 -6.8879E-05 0.10275 4.8181E-05 468.913780655195 472.249793425557 110.67 2.3167 110.67 109.87 112.18 0 1052 201 9 0 0 0 1.035E-09 4 65526 103.21 103.21 1 2.2288 2.8189 0 258930000 86019000 172910000 6945 252 3551 3960 11387;11388;11389;11390 11388 YYVTIIDAPGHR 12 0 1 Unmodified _YYVTIIDAPGHR_ 0 0 0 0 A0A087WV01;Q9H2I7;Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q53GE9;Q53GA1;Q5VTE0;P68104;A9X7H1;Q96RE1;B4DV42;Q9NZS6;A0A087WVQ9;Q53G85;A8K9C4;B4DNE0;Q16577;A6PW80;Q5JR01 A0A087WV01 A0A087WV01 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-MSMS 20170518_phospho_BAZ1ABKO BAZ1AB_KO_exp1 702.8677 2 702.867151 1403.71975 73298.91 0.90308 0.00063474 -0.07776 -5.4655E-05 0.82532 0.00058009 702.867166230172 707.871097595184 110.66 2.0897 110.66 110.01 112.1 0 943 181 8 0 0 0 0.0026651 3 65689 100.02 93.086 1 2.2477 2.8403 0 156230000 45691000 110540000 6946 252 3551 3960 11391;11392;11393 11393 YYVTIIDAPGHR 12 0 1 Unmodified _YYVTIIDAPGHR_ 0 0 0 0 A0A087WV01;Q9H2I7;Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q53GE9;Q53GA1;Q5VTE0;P68104;A9X7H1;Q96RE1;B4DV42;Q9NZS6;A0A087WVQ9;Q53G85;A8K9C4;B4DNE0;Q16577;A6PW80;Q5JR01 A0A087WV01 A0A087WV01 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 MULTI-SECPEP 20171017_Phospho_BAZ1ABKO BAZ1AB_KO_exp2 472.25 3 468.91386 1403.71975 91705.73 0.67683 0.00031738 -0.22659 -0.00010625 0.45024 0.00021112 469.248123672313 472.584184428907 89.023 0.6864 89.023 88.651 89.338 0 136 67 5 0 0 0 0.021246 1 57158 33.782 30.461 1 1.3994 1.1593 0 5565700 2211900 3353800 6947 252 3551 3960 11394 11394