Sequence N-term cleavage window C-term cleavage window Amino acid before First amino acid Second amino acid Second last amino acid Last amino acid Amino acid after A Count R Count N Count D Count C Count Q Count E Count G Count H Count I Count L Count K Count M Count F Count P Count S Count T Count W Count Y Count V Count U Count O Count Length Missed cleavages Mass Proteins Leading razor protein Start position End position Gene names Protein names Unique (Groups) Unique (Proteins) Charges PEP Score Experiment BAZ1B_KO_exp1 Experiment BAZ1B_KO_exp2 Ratio H/L Ratio H/L normalized Ratio H/L variability [%] Ratio H/L count Ratio H/L iso-count Ratio H/L type Ratio H/L BAZ1B_KO_exp1 Ratio H/L normalized BAZ1B_KO_exp1 Ratio H/L variability [%] BAZ1B_KO_exp1 Ratio H/L count BAZ1B_KO_exp1 Ratio H/L iso-count BAZ1B_KO_exp1 Ratio H/L type BAZ1B_KO_exp1 Ratio H/L BAZ1B_KO_exp2 Ratio H/L normalized BAZ1B_KO_exp2 Ratio H/L variability [%] BAZ1B_KO_exp2 Ratio H/L count BAZ1B_KO_exp2 Ratio H/L iso-count BAZ1B_KO_exp2 Ratio H/L type BAZ1B_KO_exp2 Intensity Intensity L Intensity H Intensity BAZ1B_KO_exp1 Intensity L BAZ1B_KO_exp1 Intensity H BAZ1B_KO_exp1 Intensity BAZ1B_KO_exp2 Intensity L BAZ1B_KO_exp2 Intensity H BAZ1B_KO_exp2 Reverse Potential contaminant id Protein group IDs Mod. peptide IDs Evidence IDs MS/MS IDs Best MS/MS Oxidation (M) site IDs Phospho (STY) site IDs MS/MS Count AAAAAAALQAK TILCQARNHKLRVDKAAAAAAALQAKSDEK RVDKAAAAAAALQAKSDEKAAVAGKKPVVG K A A A K S 8 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 11 0 955.54508 Q59GY2;P36578;H3BM89;B4DMJ6;H3BU31 Q59GY2 368 378 RPL4 60S ribosomal protein L4 yes no 2 7.5311E-14 81.296 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 0 755 0 0 0 0 1 AAAAAAALQAKSDEK TILCQARNHKLRVDKAAAAAAALQAKSDEK AAAAAAALQAKSDEKAAVAGKKPVVGKKGK K A A E K A 8 0 0 1 0 1 1 0 0 0 1 2 0 0 0 1 0 0 0 0 0 0 15 1 1414.7416 Q59GY2;P36578;H3BM89;B4DMJ6;H3BU31 Q59GY2 368 382 RPL4 60S ribosomal protein L4 yes no 2;3 1.6224E-45 132.86 3 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1 755 1 1;2;3;4;5 1;2;3;4;5;6 1 1182 0 AAAAAATAPPSPGPAQPGPR PPAPVAAAAPARAPRAAAAAATAPPSPGPA ATAPPSPGPAQPGPRAQRAAPLAAPPPAPA R A A P R A 8 1 0 0 0 1 0 2 0 0 0 0 0 0 6 1 1 0 0 0 0 0 20 0 1754.9064 Q6SPF0 Q6SPF0 151 170 SAMD1 Atherin yes yes 2 7.6997E-24 101.05 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2 863 2 6;7 7;8;9;10;11;12 12 1432 0 AAAAPDSRVSEEENLK ______________________________ AAAPDSRVSEEENLKKTPKKKMKMVTGAVA M A A L K K 4 1 1 1 0 0 3 0 0 0 1 1 0 0 1 2 0 0 0 1 0 0 16 1 1685.822 A0JLN3;Q9Y3B9 A0JLN3 2 17 RRP15 RRP15-like protein yes no 2 1.1574E-05 65.477 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3 292 3 8 13 13 437;438 0 AAAAPDSRVSEEENLKK ______________________________ AAPDSRVSEEENLKKTPKKKMKMVTGAVAS M A A K K T 4 1 1 1 0 0 3 0 0 0 1 2 0 0 1 2 0 0 0 1 0 0 17 2 1813.917 A0JLN3;Q9Y3B9 A0JLN3 2 18 RRP15 RRP15-like protein yes no 3 1.3432E-05 45.885 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 4 292 4 9 14 14 437;438 0 AAAPPQPSPPPTK PGSIALPVQTLVSARAAAPPQPSPPPTKFI ARAAAPPQPSPPPTKFIVMSSSSSAPSTQQ R A A T K F 3 0 0 0 0 1 0 0 0 0 0 1 0 0 6 1 1 0 0 0 0 0 13 0 1257.6717 B3KUR4;A4D299;J3KR72;P49848 B3KUR4 449 461 TAF6 Transcription initiation factor TFIID subunit 6 yes no 2 0.0045997 41.621 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 5 313 5 10 15;16 15 466 0 AAAVAAAGAGEPQSPDELLPK ______________________________ AGAGEPQSPDELLPKGDAEKPEEELEEDDD M A A P K G 7 0 0 1 0 1 2 2 0 0 2 1 0 0 3 1 0 0 0 1 0 0 21 0 1962.0058 Q549C5;Q53GB0;Q9NS69 Q549C5 2 22 MST065;TOMM22 Mitochondrial import receptor subunit TOM22 homolog yes no 2 3.3882E-24 100.55 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 6 836 6 11 17;18;19 18 1384 0 AADGGERPLAASPPGTVK VGRSAGGEPGPEAGRAADGGERPLAASPPG GGERPLAASPPGTVKAEEHQRQNINKFERR R A A V K A 4 1 0 1 0 0 1 3 0 0 1 1 0 0 3 1 1 0 0 1 0 0 18 1 1692.8795 B9EGQ5;M0QXA7;O95785;B3KR89 B9EGQ5 687 704 WIZ Protein Wiz yes no 3 1.144E-06 54.117 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 7 554 7 12 20 20 818 0 AADISLDNLVEGK QYGLGPYEAVTPLTKAADISLDNLVEGKRK TKAADISLDNLVEGKRKRRSNVSSPATPTA K A A G K R 2 0 1 2 0 0 1 1 0 1 2 1 0 0 0 1 0 0 0 1 0 0 13 0 1343.6933 B7Z3E7;A6NNK5;Q12888;H7BZY0;B3KVT9 B7Z3E7 1619 1631 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 0.0027141 51.276 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 8 329 8 13;14 21;22 21 500 0 AADKSPESQNLIDGTK RESSPLPKEVNDSPRAADKSPESQNLIDGT ADKSPESQNLIDGTKKPSLKQPDSPRSISS R A A T K K 2 0 1 2 0 1 1 1 0 1 1 2 0 0 1 2 1 0 0 0 0 0 16 1 1672.8268 B3KXW2;A0A024R283;Q9HCE3 B3KXW2 310 325 ZNF532 Zinc finger protein 532 yes no 2 0.00014905 64.537 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 9 44 9 15 23 23 44 0 AADTEEMDIEMDSGDEA RKKLEEALMADILSRAADTEEMDIEMDSGD DTEEMDIEMDSGDEA_______________ R A A E A - 3 0 0 4 0 0 4 1 0 1 0 0 2 0 0 1 1 0 0 0 0 0 17 0 1827.6663 Q9UBB5;Q69YZ5;O60535 Q9UBB5 395 411 MBD2;DKFZp586O0821;NY-CO-41 Methyl-CpG-binding domain protein 2 yes no 2 2.9622E-24 87.989 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 10 947 10 16 24 24 224;225 1683 0 AADVSVTHRPPLSPK ______________________________ AADVSVTHRPPLSPKSGAEVEAGDAAERRA M A A P K S 2 1 0 1 0 0 0 0 1 0 1 1 0 0 3 2 1 0 0 2 0 0 15 1 1573.8576 A0A087WZ13;Q8IY67 A0A087WZ13 2 16 RAVER1 Ribonucleoprotein PTB-binding 1 yes no 3 0.00026575 47.68 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 11 198 11 17 25;26 25 281 0 AAGPASPPEEDPER LSPGSRPSGGMEALKAAGPASPPEEDPERT KAAGPASPPEEDPERTKHRRKQKTPKKFTG K A A E R T 3 1 0 1 0 0 3 1 0 0 0 0 0 0 4 1 0 0 0 0 0 0 14 0 1421.6423 Q96KM6 Q96KM6 404 417 ZNF512B Zinc finger protein 512B yes yes 2 7.1515E-05 80.387 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 12 907 12 18;19 27;28;29 29 1557 0 AAGPASPPEEDPERTK LSPGSRPSGGMEALKAAGPASPPEEDPERT AGPASPPEEDPERTKHRRKQKTPKKFTGEQ K A A T K H 3 1 0 1 0 0 3 1 0 0 0 1 0 0 4 1 1 0 0 0 0 0 16 1 1650.7849 Q96KM6 Q96KM6 404 419 ZNF512B Zinc finger protein 512B yes yes 2;3 0.00011691 60.549 1 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 13 907 13 20;21;22 30;31;32;33 31 1557 0 AALAHSEEVTASQVAATK QRLREQLQLLEEQHRAALAHSEEVTASQVA AHSEEVTASQVAATKTLPNGRDALDGPAAE R A A T K T 6 0 0 0 0 1 2 0 1 0 1 1 0 0 0 2 2 0 0 2 0 0 18 0 1782.9112 Q15149;D3DWL0;H0YDN1 Q15149 2744 2761 PLEC;PLEC1 Plectin yes no 3 0.00010823 38.824 1 1.1264 1.3761 NaN 1 Median 1.1264 1.3761 NaN 1 0 Median NaN NaN NaN 0 0 Median 11240000 5523100 5716700 11240000 5523100 5716700 0 0 0 14 822 14 23 34 34 1 AALAPAKESPRK TLAQVKPSGKTHQIRAALAPAKESPRKGAA QIRAALAPAKESPRKGAAPTPPGKTGPSAA R A A R K G 4 1 0 0 0 0 1 0 0 0 1 2 0 0 2 1 0 0 0 0 0 0 12 2 1237.7143 E7ETY2;J3KQ96;Q13428;B4DRA2;B4DLB1;Q59FZ2;H0YAB7 E7ETY2 898 909 TCOF1 Treacle protein yes no 3 4.6769E-05 70.197 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 15 608 15 24;25;26 35;36;37 37 912 0 AALEPKESRSPQQSAALPR DAEEAVELPEASAPKAALEPKESRSPQQSA PKESRSPQQSAALPRRYMLREREGAPEPAS K A A P R R 4 2 0 0 0 2 2 0 0 0 2 1 0 0 3 3 0 0 0 0 0 0 19 2 2035.0811 A0A0A6YYG7;Q6IBW4;E5RJN3 A0A0A6YYG7 275 293 NCAPH2 Condensin-2 complex subunit H2 yes no 3 6.1043E-13 91.238 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 16 230 16 27;28 38;39;40 40 325;326 0 AALLKASPK MRNRIIKDEVKKLQKAALLKASPKKAPGTK VKKLQKAALLKASPKKAPGTKGTAAAAAAA K A A P K K 3 0 0 0 0 0 0 0 0 0 2 2 0 0 1 1 0 0 0 0 0 0 9 1 897.56475 A8K7N0;Q6IPH7;P50914;A8K3Q9 A8K7N0 133 141 RPL14 60S ribosomal protein L14 yes no 2 5.284E-19 117.79 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 17 370 17 29 41;42;43 42 568 0 AAMEALVVEVTK LQISHEAAACITGLRAAMEALVVEVTKQPA GLRAAMEALVVEVTKQPAIISQLDPVNERM R A A T K Q 3 0 0 0 0 0 2 0 0 0 1 1 1 0 0 0 1 0 0 3 0 0 12 0 1259.6795 Q08211;B3KU66 Q08211 1105 1116 DHX9 ATP-dependent RNA helicase A yes no 2 0.013505 38.021 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1944500 1944500 0 0 0 0 1944500 1944500 0 18 802 18 30 44 44 1 AAMYDIISSPSK KKMKLGKDEKEQSEKAAMYDIISSPSKDST SEKAAMYDIISSPSKDSTKLTLRLSRVRSS K A A S K D 2 0 0 1 0 0 0 0 0 2 0 1 1 0 1 3 0 0 1 0 0 0 12 0 1281.6275 Q6IEH8;Q6KC79;A8K2T2;A6QL62 Q6IEH8 342 353 NIPBL Nipped-B-like protein yes no 2 0.00035729 89.26 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 19 856 19 31 45;46 46 200 1411 0 AAQDRDQIYR SRSYRGGGGGGGGWRAAQDRDQIYRRSPSP GGGWRAAQDRDQIYRRSPSPYYSRGGYRSR R A A Y R R 2 2 0 2 0 2 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 10 1 1234.6054 H7C2L4;Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995 H7C2L4 72 81 TRA2B;DKFZp686F18120 Transformer-2 protein homolog beta yes no 3 0.00034635 74.533 1 1 0.75022 1.2681 NaN 1 Median NaN NaN NaN 0 0 Median 0.75022 1.2681 NaN 1 0 Median 27650000 15932000 11717000 1725500 1725500 0 25924000 14207000 11717000 20 416 20 32;33 47;48;49 49 3 AAREELLAEFGSGTLDLPALTR AVPVWDVLASGYVSRAAREELLAEFGSGTL AEFGSGTLDLPALTRRLTAIIEEAEEAPGA R A A T R R 4 2 0 1 0 0 3 2 0 0 5 0 0 1 1 1 2 0 0 0 0 0 22 1 2329.2278 A0A075B730;A0A087X1U6;P58107 A0A075B730 2523 2544 EPPK1 Epiplakin yes no 3 0.024233 26.21 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2333000 0 2333000 0 0 0 2333000 0 2333000 21 176 21 34 50 50 1 AASADSTTEGTPADGFTVLSTK KGARKSKKKQGEVSKAASADSTTEGTPADG TEGTPADGFTVLSTKSLFLGQKLNLIHSEI K A A T K S 4 0 0 2 0 0 1 2 0 0 1 1 0 1 1 3 5 0 0 1 0 0 22 0 2126.0015 O75367 O75367 168 189 H2AFY Core histone macro-H2A.1 yes yes 2 7.8762E-218 191.07 8 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 22 709 22;23;24 35;36;37;38;39;40;41;42;43;44;45 51;52;53;54;55;56;57;58;59;60;61;62;63;64;65;66;67;68;69;70;71;72 58 1059;1060;1942;1943;1944 0 AASDPLLSSVSPAVSK GVVGGLSGGALSPLRAASDPLLSSVSPAVS ASDPLLSSVSPAVSKASSRRSSFSMEEES_ R A A S K A 3 0 0 1 0 0 0 0 0 0 2 1 0 0 2 5 0 0 0 2 0 0 16 0 1527.8144 B4DIA5;A0A024QZ23;P19532 B4DIA5 441 456 TFE3 Transcription factor E3 yes no 2 1.4802E-26 118.31 1 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 23 0 25;26 46;47;48 73;74;75;76 73 0;1;2 0 AASPESASSTPESLQAR DGPGASSGDEDASGRAASPESASSTPESLQ SPESASSTPESLQARRHHQFLEPAPAPGAA R A A A R R 4 1 0 0 0 1 2 0 0 0 1 0 0 0 2 5 1 0 0 0 0 0 17 0 1687.8013 B3KPB2;A8K662;Q96BT3;B4DV17;B4DWP4 B3KPB2 395 411 CENPT Centromere protein T yes no 2 1.2868E-06 63.145 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 24 363 27 49 77 77 560 0 AASPPASASDLIEQQQK PPLPEDSIKVIRNMRAASPPASASDLIEQQ SPPASASDLIEQQQKRGRREHKALIKQDNL R A A Q K R 4 0 0 1 0 3 1 0 0 1 1 1 0 0 2 3 0 0 0 0 0 0 17 0 1739.869 A8K4U4;Q5VSL9 A8K4U4 333 349 STRIP1 Striatin-interacting protein 1 yes no 2 8.1072E-06 58.98 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 25 356 28 50 78 78 547 0 AASSPSNPAALPVASDSSPMGSK AAFKSGKRVGKPSPKAASSPSNPAALPVAS AALPVASDSSPMGSKTKETDSPSTPGKDQR K A A S K T 5 0 1 1 0 0 0 1 0 0 1 1 1 0 4 7 0 0 0 1 0 0 23 0 2128.0106 Q7Z5J4 Q7Z5J4 1105 1127 RAI1 Retinoic acid-induced protein 1 yes yes 2 4.7838E-17 77.681 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 26 870 29 51 79;80 80 202 1447;1448 0 AAVGVSMAHFSVSDALMSPPPK KRQLEEQEEALRQQRAAVGVSMAHFSVSDA AHFSVSDALMSPPPKSSLPKAELFQQEQQS R A A P K S 4 0 0 1 0 0 0 1 1 0 1 1 2 1 3 4 0 0 0 3 0 0 22 0 2198.0864 Q9BTC0 Q9BTC0 1505 1526 DIDO1 Death-inducer obliterator 1 yes yes 3 4.6508E-08 45.992 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 27 916 30 52 81 81 212;213 1580 0 AAYEAELGDARK TESEEVVSREVSGIKAAYEAELGDARKTLD GIKAAYEAELGDARKTLDSVAKERARLQLE K A A R K T 4 1 0 1 0 0 2 1 0 0 1 1 0 0 0 0 0 0 1 0 0 0 12 1 1292.6361 P02545;W8QEH3;Q5I6Y5;Q8N519;Q3BDU5;W5X314 P02545 79 90 LMNA Prelamin-A/C;Lamin-A/C yes no 2 0.024925 39.785 1 1.4977 1.8721 NaN 1 Median NaN NaN NaN 0 0 Median 1.4977 1.8721 NaN 1 0 Median 4647400 2253800 2393600 0 0 0 4647400 2253800 2393600 28 725 31 53 82 82 1 ACAVETSVDLSEISSK GKVIGLQIFNIDTDRACAVETSVDLSEISS CAVETSVDLSEISSKLGSTQSGFLVEESLP R A C S K L 2 0 0 1 1 0 2 0 0 1 1 1 0 0 0 4 1 0 0 2 0 0 16 0 1694.8033 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 219 234 CDCA2 Cell division cycle-associated protein 2 yes no 2 1.3013E-06 84.718 1 1 0.58744 0.75365 32.914 2 Median 0.76204 0.95115 NaN 1 0 Median 0.45284 0.59716 NaN 1 0 Median 32144000 20233000 11911000 17645000 10374000 7270500 14499000 9859200 4640100 29 615 32 54;55 83;84;85;86;87 85 5 ADAASSLTVDVTPPTAK PTSNAPSDPATTTAKADAASSLTVDVTPPT AASSLTVDVTPPTAKAPTTVEDRVGDSTPV K A D A K A 4 0 0 2 0 0 0 0 0 0 1 1 0 0 2 2 3 0 0 2 0 0 17 0 1642.8414 B4DQF1;B4DEI4;B4DNR1;Q9H8Y8 B4DQF1 262 278 GORASP2 Golgi reassembly-stacking protein 2 yes no 2 0.00080211 44.005 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 30 461 33 56 88 88 1881 0 ADFTVVAGDEGSSTTGGSSEENK NLPQLKELYQLSKEKADFTVVAGDEGSSTT DEGSSTTGGSSEENKGPSGSAVSRKAPSKP K A D N K G 2 0 1 2 0 0 3 4 0 0 0 1 0 1 0 4 3 0 0 2 0 0 23 0 2243.9666 P49916;B7Z6I3 P49916 836 858 LIG3 DNA ligase 3;DNA ligase yes no 2 4.2264E-17 84.468 1 1 0.86436 1.0797 NaN 1 Median 0.86436 1.0797 NaN 1 0 Median NaN NaN NaN 0 0 Median 17265000 9261600 8003400 17265000 9261600 8003400 0 0 0 31 770 34;35 57;58 89;90;91 89 1248 2 ADGYVLEGK KLLACIASRPGQCGRADGYVLEGKELEFYL PGQCGRADGYVLEGKELEFYLRKIKARKGK R A D G K E 1 0 0 1 0 0 1 2 0 0 1 1 0 0 0 0 0 0 1 1 0 0 9 0 950.47091 Q5JR95;Q5JR94;P62241;Q9BS10 Q5JR95 165 173 RPS8 40S ribosomal protein S8 yes no 2 0.0030759 65.305 1 1 1.5368 1.8886 NaN 1 Median 1.5368 1.8886 NaN 1 0 Median NaN NaN NaN 0 0 Median 11642000 9321600 2320600 3736700 1416100 2320600 7905600 7905600 0 32 785 36 59;60 92;93 93 2 ADHGEPIGR QYAWESSAGGSFTVRADHGEPIGRGTKVIL GSFTVRADHGEPIGRGTKVILHLKEDQTEY R A D G R G 1 1 0 1 0 0 1 2 1 1 0 0 0 0 1 0 0 0 0 0 0 0 9 0 950.45699 A0A024RD80;P08238;Q6PK50 A0A024RD80 169 177 HSP90AB1 Heat shock protein HSP 90-beta yes no 2 0.0011286 68.016 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 5945400 0 5945400 0 0 0 5945400 0 5945400 33 167 37 61 94 94 1 ADHSFSDGVPSDSVEAAK ______________________________ SFSDGVPSDSVEAAKNASNTEKLTDQVMQN M A D A K N 3 0 0 3 0 0 1 1 1 0 0 1 0 1 1 4 0 0 0 2 0 0 18 0 1817.8068 E9PNW0;E9PJJ2;E9PS34;E9PNJ7;E9PKT8;C9J6D1;C9JZI7;A0A024RCC9;B7ZAK9;B7ZB83;B7ZAC7;B4DS05;Q99733;E9PKI2;C9J1B1;E9PP22 E9PNW0 2 19 NAP1L4 Nucleosome assembly protein 1-like 4 yes no 2 2.2785E-06 49.425 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 34 156 38 62 95 95 215 0 ADLLQREEEEEEEEDQEGDRETTIR TPPEGLRLKPPAGWKADLLQREEEEEEEED EEEEDQEGDRETTIRGKATPAEEEKTGKVK K A D I R G 1 3 0 3 0 2 10 1 0 1 2 0 0 0 0 0 2 0 0 0 0 0 25 2 3047.3439 A0A0B4J2E5;Q15269 A0A0B4J2E5 234 258 PWP2 Periodic tryptophan protein 2 homolog yes no 4 2.566E-05 32.025 1 0.70224 0.85203 NaN 1 Median NaN NaN NaN 0 0 Median 0.70224 0.85203 NaN 1 0 Median 88241000 51485000 36756000 0 0 0 88241000 51485000 36756000 35 238 39 63 96;97 97 2 ADLSDYVSMGR A D G R 1 1 0 2 0 0 0 1 0 0 1 0 1 0 0 2 0 0 1 1 0 0 11 0 1212.5445 REV__Q59HC8 yes no 2 0.0075482 59.245 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 30626000 30626000 0 0 0 0 30626000 30626000 0 + 36 971 40 64 98 98 1 ADRSPSLSVAPQDR HPNTLVKRHFQELYKADRSPSLSVAPQDRM KADRSPSLSVAPQDRMKDPTFLGKLPSGFD K A D D R M 2 2 0 2 0 1 0 0 0 0 1 0 0 0 2 3 0 0 0 1 0 0 14 1 1497.7536 Q5VWN6 Q5VWN6 216 229 FAM208B Protein FAM208B yes yes 3 0.00050478 54.812 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 37 852 41 65;66 99;100 100 1402;1403 0 ADSLEVQQMK QLCIGNHDLFMRRRKADSLEVQQMKAQARE MRRRKADSLEVQQMKAQAREEKARKQMERQ K A D M K A 1 0 0 1 0 2 1 0 0 0 1 1 1 0 0 1 0 0 0 1 0 0 10 0 1147.5543 A0A024R1D9;A0A024R1I0;A0A024R1F6;A0A024R1J9;A0A024R1J8;B7Z4B6;P35240 A0A024R1D9 230 239 NF2 Merlin yes no 2 0.0054742 65.252 1 0.59469 0.74559 NaN 1 Median NaN NaN NaN 0 0 Median 0.59469 0.74559 NaN 1 0 Median 43150000 27361000 15789000 0 0 0 43150000 27361000 15789000 38 29 42 67 101 101 1 ADTEEEFLAFRK TPTSSKPQPKRSLRKADTEEEFLAFRKQTP LRKADTEEEFLAFRKQTPSAGKAMHTPKPA K A D R K Q 2 1 0 1 0 0 3 0 0 0 1 1 0 2 0 0 1 0 0 0 0 0 12 1 1454.7042 P46013 P46013 1762 1773 MKI67 Antigen KI-67 yes yes 2;3 0.0017094 84.054 2 1.1285 1.6167 2.7421 2 Median NaN NaN NaN 0 0 Median 1.1285 1.6167 2.7421 2 0 Median 34846000 15410000 19436000 0 0 0 34846000 15410000 19436000 39 762 43 68;69 102;103;104;105 102 4 ADVEEEFLALRK TPTSTKQWPKRSLRKADVEEEFLALRKLTP LRKADVEEEFLALRKLTPSAGKAMLTPKPA K A D R K L 2 1 0 1 0 0 3 0 0 0 2 1 0 1 0 0 0 0 0 1 0 0 12 1 1418.7405 P46013 P46013 1154 1165 MKI67 Antigen KI-67 yes no 2;3 0.01933 34.692 2 1.1324 1.5187 12.626 2 Median NaN NaN NaN 0 0 Median 1.1324 1.5187 12.626 2 0 Median 20354000 8689200 11665000 0 0 0 20354000 8689200 11665000 40 762 44 70;71 106;107 106 0 ADVEEESLALRK TPTIFKPQSKRSLRKADVEEESLALRKRTP LRKADVEEESLALRKRTPSVGKAMDTPKPA K A D R K R 2 1 0 1 0 0 3 0 0 0 2 1 0 0 0 1 0 0 0 1 0 0 12 1 1358.7042 P46013 P46013 2246 2257 MKI67 Antigen KI-67 yes yes 2 0.025511 23.226 1 1.1316 1.5819 NaN 1 Median NaN NaN NaN 0 0 Median 1.1316 1.5819 NaN 1 0 Median 14517000 5433200 9083800 0 0 0 14517000 5433200 9083800 41 762 45 72 108 108 0 ADVEVSSMSPTK A D T K 1 0 0 1 0 0 1 0 0 0 0 1 1 0 1 3 1 0 0 2 0 0 12 0 1249.586 REV__O60882 yes yes 2 0.003428 47.823 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 + 42 985 46 73 109 109 1771;2062 0 ADVIQATGDAICIFR GVDPVEAFAQNVLSKADVIQATGDAICIFR ADVIQATGDAICIFRELQCLTPRGRYDIRI K A D F R E 3 1 0 2 1 1 0 1 0 3 0 0 0 1 0 0 1 0 0 1 0 0 15 0 1648.8243 A0A024R4Z6;Q08945;E9PMD4 A0A024R4Z6 189 203 SSRP1 FACT complex subunit SSRP1 yes no 2 0.0029453 42.843 1 0.59973 0.82155 NaN 1 Median NaN NaN NaN 0 0 Median 0.59973 0.82155 NaN 1 0 Median 43753000 27189000 16564000 0 0 0 43753000 27189000 16564000 43 65 47 74 110 110 1 ADVQSIIGLQR VGRMFKQFNKLTEDKADVQSIIGLQRFFET TEDKADVQSIIGLQRFFETRMNEAFGDTKF K A D Q R F 1 1 0 1 0 2 0 1 0 2 1 0 0 0 0 1 0 0 0 1 0 0 11 0 1198.667 B2R8R5;Q13263;M0R0K9 B2R8R5 780 790 TRIM28 Transcription intermediary factor 1-beta yes no 2 0.014995 58.674 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 44 408 48 75 111 111 602 0 AEAESLYQSK AEVKAQYEDIAQKSKAEAESLYQSKYEELQ AQKSKAEAESLYQSKYEELQITAGRHGDSV K A E S K Y 2 0 0 0 0 1 2 0 0 0 1 1 0 0 0 2 0 0 1 0 0 0 10 0 1124.535 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;H6VRG2;H6VRF9;CON__P04264 H6VRG3 367 376 KRT1 Keratin, type II cytoskeletal 1 yes no 2 0.023679 42.336 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 6271000 6271000 0 0 0 0 6271000 6271000 0 + 45 670 49 76 112;113 113 2 AEALEDLVGFK NLPGSKRQPQTPKEKAEALEDLVGFKELFQ PKEKAEALEDLVGFKELFQTPGHTEESMTD K A E F K E 2 0 0 1 0 0 2 1 0 0 2 1 0 1 0 0 0 0 0 1 0 0 11 0 1190.6183 P46013 P46013 2431 2441 MKI67 Antigen KI-67 yes yes 2 0.029401 30.564 1 1.0602 1.2674 NaN 1 Median NaN NaN NaN 0 0 Median 1.0602 1.2674 NaN 1 0 Median 1657200 739900 917290 0 0 0 1657200 739900 917290 46 762 50 77 114 114 0 AEAVVNTVDISER KKRRMLKRLEQTRKKAEAVVNTVDISEREK KKAEAVVNTVDISEREKVAQLRSLYKKAGL K A E E R E 2 1 1 1 0 0 2 0 0 1 0 0 0 0 0 1 1 0 0 3 0 0 13 0 1401.71 B4DKU3;Q8IY81 B4DKU3 643 655 FTSJ3 pre-rRNA processing protein FTSJ3 yes no 2 0.00058365 83.081 1 0.63284 0.8272 NaN 1 Median NaN NaN NaN 0 0 Median 0.63284 0.8272 NaN 1 0 Median 5357200 2755400 2601800 0 0 0 5357200 2755400 2601800 47 474 51 78 115 115 1 AEDVSSAAPSPR ______________________________ ______________________________ M A E P R G 3 1 0 1 0 0 1 0 0 0 0 0 0 0 2 3 0 0 0 1 0 0 12 0 1185.5626 E5RFJ5;A8K914;P54274 E5RFJ5 2 13 TERF1 Telomeric repeat-binding factor 1 yes no 2 0.00012184 88.282 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 48 375 52 79;80 116;117;118;119;120 116 571 0 AEEDEILNRSPR DGGTVSQEEEDRKPKAEEDEILNRSPRNRK KPKAEEDEILNRSPRNRKPRRE________ K A E P R N 1 2 1 1 0 0 3 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 12 1 1427.7005 P27824 P27824 574 585 CANX Calnexin yes yes 2 0.029128 53.351 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 49 750 53 81 121 121 1168 0 AEEIHISR AGKEGTAPSENGETKAEEIHISRSTVNVST SENGETKAEEIHISRSTVNVSTSRGTPPST K A E S R S 1 1 0 0 0 0 2 0 1 2 0 0 0 0 0 1 0 0 0 0 0 0 8 0 953.49304 A0A087WZE9 A0A087WZE9 85 92 HMGN3 yes yes 2 0.00015311 69.598 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 5091300 5091300 0 0 0 0 5091300 5091300 0 50 200 54 82 122 122 1 AEENTDQASPQEDYAGFER ILCAIQNLEERKNEKAEENTDQASPQEDYA TDQASPQEDYAGFERLQSGHLTKLLEDDFW K A E E R L 3 1 1 2 0 2 4 1 0 0 0 0 0 1 1 1 1 0 1 0 0 0 19 0 2155.893 Q6PJJ1;Q6AI22;Q9NU22 Q6PJJ1 74 92 MDN1;DKFZp686H16106 Midasin yes no 2 1.8736E-05 43.813 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 51 855 55 83 123 123 1410 0 AEEQQLPPPLSPPSPSTPNHR ESGYFSLEKTKQDLKAEEQQLPPPLSPPSP PPPLSPPSPSTPNHRRSQVIEKFEALDIEK K A E H R R 1 1 1 0 0 2 2 0 1 0 2 0 0 0 7 3 1 0 0 0 0 0 21 0 2278.1342 B9EGI2;Q6WCQ1;U6FSN9;Q8N236;J3KSW8 B9EGI2 278 298 MPRIP;Mprip-Ntrk1 fusion gene Myosin phosphatase Rho-interacting protein;Tyrosine-protein kinase receptor yes no 3 1.372E-14 67.832 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 52 553 56 84 124 124 811;812 0 AEEVATFFAK VKFYYDGKVMKLSPKAEEVATFFAKMLDHE KLSPKAEEVATFFAKMLDHEYTTKEIFRKN K A E A K M 3 0 0 0 0 0 2 0 0 0 0 1 0 2 0 0 1 0 0 1 0 0 10 0 1111.555 P11387;B9EG90 P11387 253 262 TOP1 DNA topoisomerase 1 yes no 2 0.010106 47.187 1 0.76798 0.97046 NaN 1 Median NaN NaN NaN 0 0 Median 0.76798 0.97046 NaN 1 0 Median 19360000 10751000 8608800 0 0 0 19360000 10751000 8608800 53 733 57 85 125 125 1 AEEVEDETVELDVSDEEMAR PEVEKLMLQMNAKHKAEEVEDETVELDVSD DETVELDVSDEEMARRYETLVGTIGKKFAR K A E A R R 2 1 0 3 0 0 7 0 0 0 1 0 1 0 0 1 1 0 0 3 0 0 20 0 2293.9744 H3BSB3;H3BNT4;Q53HB4;Q99547 H3BSB3 68 87 MPHOSPH6 M-phase phosphoprotein 6 yes no 2 1.3072E-05 52.185 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 54 663 58 86 126 126 138 988 0 AEEYTEETEEREESTTGFDK SRSSSSSSQSSHSYKAEEYTEETEEREEST EETEEREESTTGFDKSRLGTKDFVGPSERG K A E D K S 1 1 0 1 0 0 8 1 0 0 0 1 0 1 0 1 4 0 1 0 0 0 20 1 2378.9874 Q9Y2W1 Q9Y2W1 792 811 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3 0.0008158 30.094 1 0.76825 1.0531 NaN 1 Median NaN NaN NaN 0 0 Median 0.76825 1.0531 NaN 1 0 Median 12540000 6286900 6253300 0 0 0 12540000 6286900 6253300 55 963 59 87 127;128 128 2 AEFEDQDDEAR DDLKGEMQKQAQLNRAEFEDQDDEARVQYE QLNRAEFEDQDDEARVQYEGFRPGMYVRIE R A E A R V 2 1 0 3 0 1 3 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 11 0 1323.5215 Q14692 Q14692 864 874 BMS1 Ribosome biogenesis protein BMS1 homolog yes yes 2 0.0096479 50.194 1 0.73503 0.97222 NaN 1 Median NaN NaN NaN 0 0 Median 0.73503 0.97222 NaN 1 0 Median 6178700 3346100 2832700 0 0 0 6178700 3346100 2832700 56 817 60 88 129 129 1 AEGEPQEESPLK PVSKRRGSQEKQTKKAEGEPQEESPLKSKS TKKAEGEPQEESPLKSKSQEEPKDTFEHDP K A E L K S 1 0 0 0 0 1 4 1 0 0 1 1 0 0 2 1 0 0 0 0 0 0 12 0 1312.6147 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09;E9PJA7 Q6DCA8 169 180 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 0.0037377 46.704 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 57 622 61 89 130;131 130 947 0 AEGYAEGDLTLYHR QAKTVTELVTKKKPKAEGYAEGDLTLYHRT KAEGYAEGDLTLYHRTSVTDFLRAANPVDF K A E H R T 2 1 0 1 0 0 2 2 1 0 2 0 0 0 0 0 1 0 2 0 0 0 14 0 1593.7423 B4DKU3;Q8IY81 B4DKU3 117 130 FTSJ3 pre-rRNA processing protein FTSJ3 yes no 2;3 7.1338E-05 84.821 2 0.61346 0.81137 7.2733 2 Median NaN NaN NaN 0 0 Median 0.61346 0.81137 7.2733 2 0 Median 56454000 34370000 22085000 0 0 0 56454000 34370000 22085000 58 474 62 90;91 132;133;134;135;136 135 5 AELNSTTEELHK TQQLQEVKAKLQQCKAELNSTTEELHKYQK QCKAELNSTTEELHKYQKMLEPPPSAKPFT K A E H K Y 1 0 1 0 0 0 3 0 1 0 2 1 0 0 0 1 2 0 0 0 0 0 12 0 1370.6678 O95235 O95235 701 712 KIF20A Kinesin-like protein KIF20A yes yes 2;3 0.0037071 73.781 2 0.50148 0.64512 8.9761 2 Median NaN NaN NaN 0 0 Median 0.50148 0.64512 8.9761 2 0 Median 23777000 15163000 8613800 0 0 0 23777000 15163000 8613800 59 716 63 92;93 137;138 137 1 AEPGEGTRPATVGDSSAR SGEKPPAGSEQDGWKAEPGEGTRPATVGDS GEGTRPATVGDSSARPARRVLLPTPPCGAL K A E A R P 3 2 0 1 0 0 2 3 0 0 0 0 0 0 2 2 2 0 0 1 0 0 18 1 1756.834 Q9BTC0 Q9BTC0 1636 1653 DIDO1 Death-inducer obliterator 1 yes yes 3 0.0060871 25.508 1 0.51178 0.69138 NaN 1 Median NaN NaN NaN 0 0 Median 0.51178 0.69138 NaN 1 0 Median 5267200 3589800 1677300 0 0 0 5267200 3589800 1677300 60 916 64 94 139 139 1 AESEASLLNVSTPK KTSIPVKDIKLTQSKAESEASLLNVSTPKS KAESEASLLNVSTPKSTRRSGRISSTPTTE K A E P K S 2 0 1 0 0 0 2 0 0 0 2 1 0 0 1 3 1 0 0 1 0 0 14 0 1444.7409 A0A075B754;Q96QE3;H0UIC2 A0A075B754 579 592 ATAD5 ATPase family AAA domain-containing protein 5 yes no 2 3.2616E-05 84.759 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 61 177 65 95 140 140 236;1805 0 AESISEEADSEPGR CNRTAGPSTSVQKLKAESISEEADSEPGRS KAESISEEADSEPGRSGGRKYNTFHKNASF K A E G R S 2 1 0 1 0 0 4 1 0 1 0 0 0 0 1 3 0 0 0 0 0 0 14 0 1475.6376 Q9NSI6 Q9NSI6 1784 1797 BRWD1 Bromodomain and WD repeat-containing protein 1 yes yes 2 0.0017813 45.992 1 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 62 938 66 96;97;98 141;142;143 142 1652;1653;1654 0 AESPESSAIESTQSTPQK SKSKQHRVSRRAQQRAESPESSAIESTQST PESSAIESTQSTPQKGRGRPSKTPSPSQPK R A E Q K G 2 0 0 0 0 2 3 0 0 1 0 1 0 0 2 5 2 0 0 0 0 0 18 0 1875.8698 Q9NTI5 Q9NTI5 1356 1373 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes yes 2 3.7303E-58 105.06 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 63 940 67 99 144 144 1667 0 AESTLQNSSSAVHTESNK CRRIIPPKMKNTSSKAESTLQNSSSAVHTE TLQNSSSAVHTESNKLQPKRTADAMNLSVD K A E N K L 2 0 2 0 0 1 2 0 1 0 1 1 0 0 0 5 2 0 0 1 0 0 18 0 1888.8763 C9JE56;A0A0C4DFX7;Q9H967 C9JE56 41 58 WDR76 WD repeat-containing protein 76 yes no 3 0.0073364 22.985 1 0.67214 0.89257 NaN 1 Median NaN NaN NaN 0 0 Median 0.67214 0.89257 NaN 1 0 Median 5859000 3862800 1996100 0 0 0 5859000 3862800 1996100 64 240 68 100 145 145 1 AETECQNTEYQQLLDIK QAQISALEEQLQQIRAETECQNTEYQQLLD TECQNTEYQQLLDIKIRLENEIQTYRSLLE R A E I K I 1 0 1 1 1 3 3 0 0 1 2 1 0 0 0 0 2 0 1 0 0 0 17 0 2081.9575 CON__P13645;P13645 CON__P13645 423 439 KRT10 Keratin, type I cytoskeletal 10 yes no 2 0.0051255 37.013 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 24931000 24931000 0 0 0 0 24931000 24931000 0 + 65 579 69 101 146 146 1 AETLEFNDVYQEVK ______________________________ MAETLEFNDVYQEVKGSMNDGRLRLSRQGI M A E V K G 1 0 1 1 0 1 3 0 0 0 1 1 0 1 0 0 1 0 1 2 0 0 14 0 1683.7992 A0A024R4Z6;Q08945 A0A024R4Z6 2 15 SSRP1 FACT complex subunit SSRP1 yes no 2 9.1739E-16 88.596 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1486500 0 1486500 1486500 0 1486500 0 0 0 66 65 70 102 147 147 1 AEVVETTQVYTEEETR PETGLRLLPLKGAEKAEVVETTQVYTEEET EVVETTQVYTEEETRRAFEETQIDIPGGGS K A E T R R 1 1 0 0 0 1 5 0 0 0 0 0 0 0 0 0 4 0 1 3 0 0 16 0 1882.8796 Q15149;D3DWL0;Q96IE3 Q15149 3686 3701 PLEC;PLEC1 Plectin yes no 2 9.8046E-26 114.82 1 0.70347 0.90079 NaN 1 Median 0.70347 0.90079 NaN 1 0 Median NaN NaN NaN 0 0 Median 9351200 6010300 3340900 9351200 6010300 3340900 0 0 0 67 822 71 103 148;149 148 2 AEVVETTQVYTEEETRR PETGLRLLPLKGAEKAEVVETTQVYTEEET VVETTQVYTEEETRRAFEETQIDIPGGGSH K A E R R A 1 2 0 0 0 1 5 0 0 0 0 0 0 0 0 0 4 0 1 3 0 0 17 1 2038.9807 Q15149;D3DWL0;Q96IE3 Q15149 3686 3702 PLEC;PLEC1 Plectin yes no 3 6.7174E-06 50.305 1 2 1.3815 1.9831 103.18 2 Median 0.73259 0.95603 NaN 1 0 Median 2.6053 4.1135 NaN 1 0 Median 56438000 24988000 31450000 37396000 20658000 16738000 19042000 4330100 14712000 68 822 72 104;105;106 150;151;152;153;154;155;156;157 152 8 AFGPGLQGGSAGSPAR FPLEAVAPTKPSKVKAFGPGLQGGSAGSPA FGPGLQGGSAGSPARFTIDTKGAGTGGLGL K A F A R F 3 1 0 0 0 1 0 5 0 0 1 0 0 1 2 2 0 0 0 0 0 0 16 0 1428.711 Q5HY54;Q60FE6;Q60FE5;P21333;A6NDY9;A0A087WWY3 Q5HY54 1072 1087 FLNA Filamin-A yes no 2 1.0506E-173 181.51 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 69 746 73 107;108 158;159;160;161;162;163;164 159 1164 0 AFLAELEQNSPK PTKTETVKAQAESNKAFLAELEQNSPKIQK SNKAFLAELEQNSPKIQKVKEALAGLLVTY K A F P K I 2 0 1 0 0 1 2 0 0 0 2 1 0 1 1 1 0 0 0 0 0 0 12 0 1345.6878 H0Y390;H3BPE1;H3BQK9;Q9UPN3 H0Y390 1558 1569 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes no 2 7.8844E-41 116.01 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 70 646 74 109;110 165;166 166 977 0 AFMGTPVQK MLTPKPAGGDEKDIKAFMGTPVQKLDLAGT DEKDIKAFMGTPVQKLDLAGTLPGSKRQLQ K A F Q K L 1 0 0 0 0 1 0 1 0 0 0 1 1 1 1 0 1 0 0 1 0 0 9 0 977.50044 P46013 P46013 1189 1197 MKI67 Antigen KI-67 yes no 2 7.3807E-06 98.523 1 1.0188 1.329 NaN 1 Median NaN NaN NaN 0 0 Median 1.0188 1.329 NaN 1 0 Median 15939000 8573500 7365100 0 0 0 15939000 8573500 7365100 71 762 75 111 167;168 168 172 2 AFPEHFTYEPNEADAAQGYR LGRYYMSARHMALSKAFPEHFTYEPNEADA FTYEPNEADAAQGYRYPRPASVPPSPSLSR K A F Y R Y 4 1 1 1 0 1 3 1 1 0 0 0 0 2 2 0 1 0 2 0 0 0 20 0 2312.0134 B7Z806;B7Z6I6;Q53ER0;A8K6K7;P13807;B7Z255 B7Z806 536 555 GYS1 Glycogen [starch] synthase, muscle yes no 3 4.2029E-05 39.905 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 7813400 7813400 0 0 0 0 7813400 7813400 0 72 364 76 112 169 169 1 AFVEDSEDEDGAGEGGSSLLQK QSYVEEQKQLKESFRAFVEDSEDEDGAGEG DEDGAGEGGSSLLQKRAKTRQEKAQEEADY R A F Q K R 2 0 0 3 0 1 4 4 0 0 2 1 0 1 0 3 0 0 0 1 0 0 22 0 2238.9764 B7ZLF4;A0A024R7C4;B4DUY9;Q8N9T8;H0YFD2;F8WFC1 B7ZLF4 60 81 KRI1;FLJ12949 Protein KRI1 homolog yes no 2 0 299.71 1 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 73 90 77 113;114;115 170;171;172;173;174;175;176;177;178;179 178 124 0 AGALHAQVER HLCRARRYCHDLGERAGALHAQVERLVQQA DLGERAGALHAQVERLVQQAGRQPDSPTAL R A G E R L 3 1 0 0 0 1 1 1 1 0 1 0 0 0 0 0 0 0 0 1 0 0 10 0 1050.557 Q9BQG0;I3L1L3 Q9BQG0 897 906 MYBBP1A Myb-binding protein 1A yes no 3 0.019691 27.481 1 0.62183 0.80744 NaN 1 Median NaN NaN NaN 0 0 Median 0.62183 0.80744 NaN 1 0 Median 13582000 8421800 5160700 0 0 0 13582000 8421800 5160700 74 914 78 116 180 180 1 AGDPGEMPQSPTGLGQPK QFSSTPLAGLAPKRRAGDPGEMPQSPTGLG PGEMPQSPTGLGQPKRRGRPPSKFFKQMEQ R A G P K R 1 0 0 1 0 2 1 4 0 0 1 1 1 0 4 1 1 0 0 0 0 0 18 0 1765.8305 J3QK86;J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9;H0YHL2 J3QK86 1356 1373 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A yes no 2 2.2404E-07 63.145 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 75 636 79 117 181;182 182 135 963 0 AGEVFIHK ITEEEMRKLFEKYGKAGEVFIHKDKGFGFI LFEKYGKAGEVFIHKDKGFGFIRLETRTLA K A G H K D 1 0 0 0 0 0 1 1 1 1 0 1 0 1 0 0 0 0 0 1 0 0 8 0 899.4865 A0A0S2Z4E7;C9IZL7;H7C367;C9JYS8;A8K525;A0A0S2Z4Z9;Q15233 A0A0S2Z4E7 100 107 NONO Non-POU domain-containing octamer-binding protein yes no 2 0.0065836 81.784 1 3.2862 4.3253 NaN 1 Median NaN NaN NaN 0 0 Median 3.2862 4.3253 NaN 1 0 Median 12757000 2751400 10006000 0 0 0 12757000 2751400 10006000 76 265 80 118 183 183 1 AGFAGDDAPR EIAALVIDNGSGMCKAGFAGDDAPRAVFPS SGMCKAGFAGDDAPRAVFPSIVGRPRHQGV K A G P R A 3 1 0 2 0 0 0 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 10 0 975.44101 P63261;B4E3A4;Q8WVW5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4DVQ0;B4E335;B4DW52;I3L3I0;I3L1U9;B3KUD3;B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;I3L4N8;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;Q6S8J3;A5A3E0;K7EM38;I3L3R2;J3KT65;L0R5C4;P0CG39;P0CG38;A1E282;G5E9R0;E7EVS6;C9JTX5;C9JUM1;C9JZR7;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1;F8WCH0 P63261 19 28 ACTG1;PS1TP5BP1;ACTB;ACTA2;ACTG2;ACTA1;ACTC1;POTEE;POTEF;POTEM;POTEJ;POTEI Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member J;POTE ankyrin domain family member I yes no 2 0.0011176 75.378 2 2.906 4.0628 NaN 1 Median NaN NaN NaN 0 0 Median 2.906 4.0628 NaN 1 0 Median 81895000 20912000 60983000 0 0 0 81895000 20912000 60983000 77 794 81 119;120 184;185 184 2 AGFNYESPSK SSSKKDLKSAVLSEKAGFNYESPSKGGNFP VLSEKAGFNYESPSKGGNFPSFPHDEVTDR K A G S K G 1 0 1 0 0 0 1 1 0 0 0 1 0 1 1 2 0 0 1 0 0 0 10 0 1098.4982 Q9UHF7;H0YC29;E5RJ97;E7EVN4;F8W8T0 Q9UHF7 84 93 TRPS1 Zinc finger transcription factor Trps1 yes no 2 0.0022334 63.944 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 78 951 82 121 186;187 186 1698 0 AGGAARPVSLR PPPQPQPPPEGGAVRAGGAARPVSLREVVR GAVRAGGAARPVSLREVVRYLGGSGGAGGR R A G L R E 3 2 0 0 0 0 0 2 0 0 1 0 0 0 1 1 0 0 0 1 0 0 11 1 1053.6043 Q6SPF0;E9PIW9 Q6SPF0 242 252 SAMD1 Atherin yes no 3 0.008824 42.243 1 0.38175 0.54415 NaN 1 Median NaN NaN NaN 0 0 Median 0.38175 0.54415 NaN 1 0 Median 7926100 5705100 2221000 0 0 0 7926100 5705100 2221000 79 863 83 122 188 188 1 AGGLDWPEATEVSPSR RAFAYERQASSSSSRAGGLDWPEATEVSPS GGLDWPEATEVSPSRTIRAPAVRTLQRFQS R A G S R T 2 1 0 1 0 0 2 2 0 0 1 0 0 0 2 2 1 1 0 1 0 0 16 0 1670.79 E9PJR7;E9PRW6;E9PKC4;E9PK71;Q9Y446 E9PJR7 70 85 PKP3 Plakophilin-3 yes no 2 0.00053043 42.095 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 80 621 84 123 189 189 946 0 AGGPTTPLSPTR ______________________________ GSRAGGPTTPLSPTRLSRLQEKEELRELND R A G T R L 1 1 0 0 0 0 0 2 0 0 1 0 0 0 3 1 3 0 0 0 0 0 12 0 1153.6091 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;A0A0D9SFY5 P20700 15 26 LMNB1 Lamin-B1 yes no 2 4.0793E-82 153.05 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 81 745 85;86 124;125 190;191;192;193 192 1163;1965 0 AGGSGGAGVTLDEAR TRSSKTRAASCPAAKAGGSGGAGVTLDEAR AGGSGGAGVTLDEARKVEVDGSLSDSHVSP K A G A R K 3 1 0 1 0 0 1 5 0 0 1 0 0 0 0 1 1 0 0 1 0 0 15 0 1316.6321 C9JG15;Q9ULI0 C9JG15 58 72 ATAD2B ATPase family AAA domain-containing protein 2B yes no 2 2.7499E-07 89.466 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 82 561 87 126 194 194 842 0 AGKLSPLK PSATFQQATKIKKLRAGKLSPLKSKFKTGK TKIKKLRAGKLSPLKSKFKTGKLQIGRKGV R A G L K S 1 0 0 0 0 0 0 1 0 0 2 2 0 0 1 1 0 0 0 0 0 0 8 1 812.51199 Q03164;E9PR05;Q9UPD0;Q9Y6P1;H0YNL8;D3DW85;A0A0A6YY96 Q03164 275 282 KMT2A;MLL;IREB2 Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes no 2 0.018104 74.962 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 83 798 88 127 195;196 196 1282 0 AGLESGAEPGDGDSDTTK IKKEKKKSKKDKKAKAGLESGAEPGDGDSD ESGAEPGDGDSDTTKKKKKKKKAKEVELVS K A G T K K 2 0 0 3 0 0 2 4 0 0 1 1 0 0 1 2 2 0 0 0 0 0 18 0 1705.7279 O60832 O60832 481 498 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 2 8.7603E-183 187.75 1 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 84 706 89 128;129;130 197;198;199;200;201;202;203;204;205;206;207 199 1048;1940;1941 0 AGLESGAEPGDGDSDTTKK IKKEKKKSKKDKKAKAGLESGAEPGDGDSD SGAEPGDGDSDTTKKKKKKKKAKEVELVSE K A G K K K 2 0 0 3 0 0 2 4 0 0 1 2 0 0 1 2 2 0 0 0 0 0 19 1 1833.8228 O60832 O60832 481 499 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 2;3 5.1606E-14 94.01 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 85 706 90 131;132;133;134 208;209;210;211 210 1048;1940;1941 0 AGLGSPERPPK PEETREPGSPPSVQRAGLGSPERPPKTSPG SVQRAGLGSPERPPKTSPGSPRLQQGAGLE R A G P K T 1 1 0 0 0 0 1 2 0 0 1 1 0 0 3 1 0 0 0 0 0 0 11 1 1107.6037 Q9H6F5;H0YG79;Q6ZW18 Q9H6F5 54 64 CCDC86 Coiled-coil domain-containing protein 86 yes no 2;3 6.3448E-08 104.24 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 86 927 91 135;136 212;213;214;215;216 216 1615 0 AGLGSPERPPKTSPGSPR PEETREPGSPPSVQRAGLGSPERPPKTSPG GSPERPPKTSPGSPRLQQGAGLESPQGQPE R A G P R L 1 2 0 0 0 0 1 3 0 0 1 1 0 0 5 3 1 0 0 0 0 0 18 2 1789.9435 Q9H6F5;H0YG79;Q6ZW18 Q9H6F5 54 71 CCDC86 Coiled-coil domain-containing protein 86 yes no 2;3;4 5.0167E-33 120.89 3 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 87 927 92;93 137;138;139;140;141 217;218;219;220;221;222 220 1615;1616;1617;2039 0 AGLQFPVGR QGGKARAKAKTRSSRAGLQFPVGRVHRLLR KTRSSRAGLQFPVGRVHRLLRKGNYAERVG R A G G R V 1 1 0 0 0 1 0 2 0 0 1 0 0 1 1 0 0 0 0 1 0 0 9 0 943.52395 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;B2R5B6;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;Q96QV6;P16104;V9GZN0;Q71UI9;P0C0S5;C9J0D1;Q8IUE6 A3KPC7 22 30 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;HIST1H2AA;H2AFX;H2AFV;H2AFZ;HIST2H2AB Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A type 1-A;Histone H2AX;Histone H2A.V;Histone H2A.Z;Histone H2A type 2-B no no 2 2.1681E-19 117.17 2 2 0.67282 0.91621 4.6884 2 Median 0.70523 0.88633 NaN 1 0 Median 0.64189 0.94709 NaN 1 0 Median 547340000 378390000 168940000 23381000 10745000 12636000 523960000 367650000 156310000 88 132;732;872 94 142;143;144;145 223;224;225;226;227;228;229;230 225 8 AGLSEEDDSLVDVYYR ESGSEQERVSKKPKKAGLSEEDDSLVDVYY GLSEEDDSLVDVYYREGKEEAEETNVLPKE K A G Y R E 1 1 0 3 0 0 2 1 0 0 2 0 0 0 0 2 0 0 2 2 0 0 16 0 1829.8319 Q14690 Q14690 1490 1505 PDCD11 Protein RRP5 homolog yes yes 2 1.4785E-05 65.092 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 89 816 95 146;147 231;232;233 232 1346 0 AGMSSNQSISSPVLDAVPR SGHSSSELSPDAVEKAGMSSNQSISSPVLD SNQSISSPVLDAVPRTPSRERSSSASSPEM K A G P R T 2 1 1 1 0 1 0 1 0 1 1 0 1 0 2 5 0 0 0 2 0 0 19 0 1914.9469 A0A140VK53;Q9UQ35;O60382 A0A140VK53 1394 1412 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 yes no 2 3.2108E-06 49.993 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 90 284 96 148 234 234 58 397;398 0 AGNALTPELAPVQIK PSGRKRRRVPRDGRRAGNALTPELAPVQIK AGNALTPELAPVQIKVEEDFGFEADEALDS R A G I K V 3 0 1 0 0 1 1 1 0 1 2 1 0 0 2 0 1 0 0 1 0 0 15 0 1520.8562 A0A024R4Q5;P0C1Z6 A0A024R4Q5 202 216 TFPT TCF3 fusion partner yes no 2 0.0001082 67.964 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 91 63 97 149 235;236 236 1784 0 AGQEPSPKPGTDVIPAAPR MPLPEPSEQEGESVKAGQEPSPKPGTDVIP PSPKPGTDVIPAAPRKPREFSKLVLLTASD K A G P R K 3 1 0 1 0 1 1 2 0 1 0 1 0 0 5 1 1 0 0 1 0 0 19 1 1886.985 Q4VC44;I3L0R3;I3L231 Q4VC44 16 34 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 yes no 3 3.298E-09 68.552 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 92 833 98 150 237;238 237 1378 0 AGTDSPVSCASVTEER IPKAKNKSESENEPKAGTDSPVSCASVTEE GTDSPVSCASVTEERVASDSPKPALTLQQG K A G E R V 2 1 0 1 1 0 2 1 0 0 0 0 0 0 1 3 2 0 0 2 0 0 16 0 1664.7312 E9PEI0;Q69YH5 E9PEI0 691 706 CDCA2 Cell division cycle-associated protein 2 yes no 2 1.3583E-07 89.484 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 93 615 99 151 239;240;241 240 931 0 AGVNTVTTLVENK AGKGDVPTKRPPVLRAGVNTVTTLVENKKA LRAGVNTVTTLVENKKAQLVVIAHDVDPIE R A G N K K 1 0 2 0 0 0 1 1 0 0 1 1 0 0 0 0 3 0 0 3 0 0 13 0 1344.7249 P62424;Q9BY74;Q5T8U2;Q5T8U3 P62424 138 150 RPL7A;RP-L7a 60S ribosomal protein L7a yes no 2 0.021105 48.284 1 0.76411 0.90781 NaN 1 Median 0.76411 0.90781 NaN 1 0 Median NaN NaN NaN 0 0 Median 3029000 1625200 1403800 3029000 1625200 1403800 0 0 0 94 789 100 152 242 242 1 AGVVNGTGAPGQSPGAGR YNKPNPNQISVNNVKAGVVNGTGAPGQSPG VNGTGAPGQSPGAGRACESCYTTQSYQWYS K A G G R A 3 1 1 0 0 1 0 6 0 0 0 0 0 0 2 1 1 0 0 2 0 0 18 0 1551.7754 Q59FW1;H0Y4T7;A0A024R6P5;E7ESY4;Q13330 Q59FW1 166 183 MTA1 Metastasis-associated protein MTA1 yes no 2 7.5169E-09 69.081 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 95 83 101 153 243;244 243 111 0 AHEPTYFTVDCAEAGQGDVSIGIK KVKVYGPGVAKTGLKAHEPTYFTVDCAEAG DCAEAGQGDVSIGIKCAPGVVGPAEADIDF K A H I K C 3 0 0 2 1 1 2 3 1 2 0 1 0 1 1 1 2 0 1 2 0 0 24 0 2564.1853 Q5HY54;Q60FE6;Q60FE5;P21333;A6NDY9;A0A087WWY3 Q5HY54 786 809 FLNA Filamin-A yes no 3 0.02804 12.196 1 0.83995 0.96586 NaN 1 Median 0.83995 0.96586 NaN 1 0 Median NaN NaN NaN 0 0 Median 2101800 1227000 874820 2101800 1227000 874820 0 0 0 96 746 102 154 245 245 0 AHFNAMFQPSSPTR GLASPLGHRMQLESRAHFNAMFQPSSPTRR RAHFNAMFQPSSPTRRPGFSPTSHRLLPTP R A H T R R 2 1 1 0 0 1 0 0 1 0 0 0 1 2 2 2 1 0 0 0 0 0 14 0 1589.7409 Q53SY8;H0Y4Q6;Q8WUA4 Q53SY8 349 362 GTF3C2 General transcription factor 3C polypeptide 2 yes no 2 0.00013594 78.505 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 97 647 103 155 246 246 137 978;979 0 AHGLLAEENR AEKASYAEQLSMLKKAHGLLAEENRGLGER SMLKKAHGLLAEENRGLGERANLGRQFLEV K A H N R G 2 1 1 0 0 0 2 1 1 0 2 0 0 0 0 0 0 0 0 0 0 0 10 0 1108.5625 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q59HB8;Q96HN5;H0YFY6;Q7Z757;A0A024R5G4;K4DIE0 A0A087WY61 1441 1450 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 yes no 3 0.00016809 73.985 1 0.27424 0.36295 NaN 1 Median NaN NaN NaN 0 0 Median 0.27424 0.36295 NaN 1 0 Median 11196000 8246800 2949000 0 0 0 11196000 8246800 2949000 98 71 104 156 247 247 1 AHLGTALK SHRRDQKWHDKQYKKAHLGTALKANPFGGA HDKQYKKAHLGTALKANPFGGASHAKGIVL K A H L K A 2 0 0 0 0 0 0 1 1 0 2 1 0 0 0 0 1 0 0 0 0 0 8 0 809.47594 A8K517;P62266;D6RD47;D6RDJ2;D6RIX0;D6R9I7 A8K517 30 37 RPS23 40S ribosomal protein S23 yes no 2 5.0897E-23 108.09 2 1 0.65565 0.82535 NaN 1 Median NaN NaN NaN 0 0 Median 0.65565 0.82535 NaN 1 0 Median 338570000 215100000 123470000 29850000 29850000 0 308720000 185250000 123470000 99 358 105 157;158;159 248;249;250;251;252;253 249 6 AHLMEIQVNGGTVAEK CKRRFYKNWHKSKKKAHLMEIQVNGGTVAE HLMEIQVNGGTVAEKLDWARERLEQQVPVN K A H E K L 2 0 1 0 0 1 2 2 1 1 1 1 1 0 0 0 1 0 0 2 0 0 16 0 1695.8614 B3KS36;P39023;H7C3M2;B5MCW2;H7C422;Q9NY85;G5E9G0;Q8TBW1;Q96QL0;Q49AJ9;Q9BT63 B3KS36 129 144 RPL3;rpl3 60S ribosomal protein L3 yes no 2 8.2057E-12 66.708 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 100 443 106 160 254 254 87 1 AHQVVEDGYEFFAK VAKFLHKHDLDLICRAHQVVEDGYEFFAKR RAHQVVEDGYEFFAKRQLVTLFSAPNYCGE R A H A K R 2 0 0 1 0 1 2 1 1 0 0 1 0 2 0 0 0 0 1 2 0 0 14 0 1638.7678 A0A024RBP2;F8W0W8;P36873;Q9UPN1;F8VYE8;B4DNE3;C4TNW6;E9PMD7;A0A140VJS9;B3KXM2;P62136;B7ZB67;B4DJ75;V9HW04;P62140 A0A024RBP2 247 260 PPP1CC;PPP1CA;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit no no 2;3 1.5593E-05 77.062 2 2 0.92386 1.1398 10.346 4 Median 1.0056 1.2357 6.1028 2 0 Median 0.84405 1.0544 5.6833 2 0 Median 58220000 32408000 25812000 10962000 5418900 5543500 47257000 26989000 20269000 101 148;280;470 107 161;162;163;164 255;256;257;258;259;260 258 4 AHSIQIMK VTQCYRDMGARHRARAHSIQIMKVEEIAAS GARHRARAHSIQIMKVEEIAASKCRRPAVK R A H M K V 1 0 0 0 0 1 0 0 1 2 0 1 1 0 0 1 0 0 0 0 0 0 8 0 926.50077 M0R0P7;M0R3D6;M0R1A7;M0R117;B4DM74;B2R4C0;Q02543;B4DM94;B4DUV3;Q53HD3;Q76N54 M0R0P7 82 89 RPL18A 60S ribosomal protein L18a yes no 2 7.2565E-20 107.19 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 36374000 36374000 0 0 0 0 36374000 36374000 0 102 397 108 165 261 261 79 1 AHVFECNLESSVESIISPK AKIWLAAHWDKKLTKAHVFECNLESSVESI ECNLESSVESIISPKVKMALRTSGHLLLGV K A H P K V 1 0 1 0 1 0 3 0 1 2 1 1 0 1 1 4 0 0 0 2 0 0 19 0 2145.0412 E5RJW1;E5RJK5;B3KUT8;E5RFV8;E5RIN7;A0A024R9J0;O60216 E5RJW1 30 48 RAD21 Double-strand-break repair protein rad21 homolog yes no 3 5.2006E-11 77.899 1 0.49578 0.65539 NaN 1 Median NaN NaN NaN 0 0 Median 0.49578 0.65539 NaN 1 0 Median 13346000 9131200 4214600 0 0 0 13346000 9131200 4214600 103 117 109 166 262 262 1 AHVTHPELK KYERFIRPMGLRFKKAHVTHPELKATFCLP GLRFKKAHVTHPELKATFCLPILGVKKNPS K A H L K A 1 0 0 0 0 0 1 0 2 0 1 1 0 0 1 0 1 0 0 1 0 0 9 0 1030.556 Q5J7U2;O95478 Q5J7U2 181 189 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog yes no 3 0.021747 20.972 1 0.52878 0.68571 NaN 1 Median NaN NaN NaN 0 0 Median 0.52878 0.68571 NaN 1 0 Median 6884500 4437600 2446900 0 0 0 6884500 4437600 2446900 104 720 110 167 263 263 1 AIEEGTLEEIEEEVR EVDYSDSLTEKQWLKAIEEGTLEEIEEEVR AIEEGTLEEIEEEVRQKKSSRKRKRDSDAG K A I V R Q 1 1 0 0 0 0 7 1 0 2 1 0 0 0 0 0 1 0 0 1 0 0 15 0 1744.8367 A7E2E1;Q9HBD4;B9EGQ8;A0A0A0MT49;P51532;B4E0F1;B4DSI8;B3KNW7;K7EP28 A7E2E1 1391 1405 SMARCA4 Transcription activator BRG1 yes no 2 4.3104E-06 74.76 1 1.1734 1.498 NaN 1 Median NaN NaN NaN 0 0 Median 1.1734 1.498 NaN 1 0 Median 16870000 7800300 9069600 0 0 0 16870000 7800300 9069600 105 224 111 168 264;265 265 2 AIFAGYKR ______________________________ SGRLWSKAIFAGYKRGLRNQREHTALLKIE K A I K R G 2 1 0 0 0 0 0 1 0 1 0 1 0 1 0 0 0 0 1 0 0 0 8 1 924.51814 F8WBS5;F8WB72;C9K025;P18077 F8WBS5 9 16 RPL35A 60S ribosomal protein L35a yes no 2 0.028672 37.646 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 106 567 112 169 266 266 1 AIPVSPSAVEEDEDEDGHTVVATAR EKPKYQINNISTVPKAIPVSPSAVEEDEDE EDEDEDGHTVVATARGIFNSNGGVLSSIET K A I A R G 4 1 0 3 0 0 4 1 1 1 0 0 0 0 2 2 2 0 0 4 0 0 25 0 2593.2144 H0Y3R8;B4DZK4;Q68DX9;A0A087X0K9;Q6MZU1;G5E9E7;A9CQZ8;G3V1L9;Q07157 H0Y3R8 85 109 TJP1;DKFZp686M05161;DKFZp686A1195 Tight junction protein ZO-1 yes no 3 3.4887E-32 99.446 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 107 202 113 170 267;268 268 284 0 AISSYFVSTMSSSIK RNGFPKQTAAQLILKAISSYFVSTMSSSIK AISSYFVSTMSSSIKTVYFVLFDSESIGIY K A I I K T 1 0 0 0 0 0 0 0 0 2 0 1 1 1 0 6 1 0 1 1 0 0 15 0 1606.7913 O75367;Q59FH0;B4DJC3 O75367 333 347 H2AFY Core histone macro-H2A.1;Histone H2A yes no 2 4.5203E-06 78.324 1 0.54643 0.68813 NaN 1 Median NaN NaN NaN 0 0 Median 0.54643 0.68813 NaN 1 0 Median 229990000 150380000 79609000 0 0 0 229990000 150380000 79609000 108 709 114 171 269;270 269 149 2 AITGASLADIMAK EIQKKRTRRAVKFQRAITGASLADIMAKRN QRAITGASLADIMAKRNQKPEVRKAQREQA R A I A K R 4 0 0 1 0 0 0 1 0 2 1 1 1 0 0 1 1 0 0 0 0 0 13 0 1260.6748 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 81 93 RPL24;HEL-S-310 60S ribosomal protein L24 yes no 2 0.0022708 62.408 2 0.41419 0.51912 4.3391 2 Median NaN NaN NaN 0 0 Median 0.41419 0.51912 4.3391 2 0 Median 43485000 31040000 12444000 0 0 0 43485000 31040000 12444000 109 563 115 172;173 271;272;273 272 110 3 AITSLLGGGSPK EEEGEVSASTNARNKAITSLLGGGSPKNNT RNKAITSLLGGGSPKNNTAAETEDDESDGE K A I P K N 1 0 0 0 0 0 0 3 0 1 2 1 0 0 1 2 1 0 0 0 0 0 12 0 1099.6237 Q6IEH8;Q6KC79 Q6IEH8 2649 2660 NIPBL Nipped-B-like protein yes no 2 4.7798E-52 139.3 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 110 856 116 174;175 274;275;276;277;278;279;280 276 1412 0 AKEVELVSE DGDSDTTKKKKKKKKAKEVELVSE______ KKKKKKAKEVELVSE_______________ K A K S E - 1 0 0 0 0 0 3 0 0 0 1 1 0 0 0 1 0 0 0 2 0 0 9 1 1002.5233 O60832 O60832 506 514 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 2 3.2431E-05 98.04 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 111 706 117 176 281 281 1049 0 AKNSDLLTSPDVGLLK LNLADPVGSLKPHLRAKNSDLLTSPDVGLL KNSDLLTSPDVGLLKLASPELERLIIQSSN R A K L K L 1 0 1 2 0 0 0 1 0 0 4 2 0 0 1 2 1 0 0 1 0 0 16 1 1669.9251 P05412 P05412 55 70 JUN Transcription factor AP-1 yes yes 2 8.2412E-05 55.04 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 112 727 118 177 282;283 283 1119;1120;1957 0 AKPTGARPSALDR KVRQSLQQQHHKEAKAKPTGARPSALDRFV AKAKPTGARPSALDRFVR____________ K A K D R F 3 2 0 1 0 0 0 1 0 0 1 1 0 0 2 1 1 0 0 0 0 0 13 2 1338.7368 B4DP15;B4DNI0;B0UZZ8;A8K806;O15213;A8K9A1 B4DP15 541 553 C6orf11;WDR46 WD repeat-containing protein 46 yes no 3 0.024338 19.211 1 0.58623 0.79737 NaN 1 Median NaN NaN NaN 0 0 Median 0.58623 0.79737 NaN 1 0 Median 26453000 15227000 11227000 0 0 0 26453000 15227000 11227000 113 372 119 178 284 284 0 AKQEELEAALQR AEAEERGELALKDARAKQEELEAALQRAKQ DARAKQEELEAALQRAKQDMARQLREYQEL R A K Q R A 3 1 0 0 0 2 3 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 12 1 1384.731 CON__P08729;B3KY79;CON__Q3KNV1;P08729;Q96GE1 CON__P08729 352 363 KRT7 Keratin, type II cytoskeletal 7 yes no 3 0.011571 42.809 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2606800 0 2606800 0 0 0 2606800 0 2606800 + 114 576 120 179 285 285 1 ALAAAGYDVEK ASKERSGVSLAALKKALAAAGYDVEKNNSR ALKKALAAAGYDVEKNNSRIKLGLKSLVSK K A L E K N 4 0 0 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 1 1 0 0 11 0 1106.5608 P16403;A1L407;P22492;Q02539;Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402 Q4VB24 65 75 HIST1H1C;HIST1H1T;HIST1H1A;HIST1H1E;HIST1H1D Histone H1.2;Histone H1t;Histone H1.1;Histone H1.4;Histone H1.3 no no 1;2 6.8005E-13 107.79 2 2 0.7657 0.94298 14.019 4 Median 0.87598 1.0726 2.494 2 0 Median 0.6712 0.84243 0.23031 2 0 Median 346390000 200020000 146380000 76922000 39567000 37356000 269470000 160450000 109020000 115 308;739 121 180;181;182;183 286;287;288;289;290;291;292;293 290 7 ALAAAGYDVEKNNSR ASKERSGVSLAALKKALAAAGYDVEKNNSR ALAAAGYDVEKNNSRIKLGLKSLVSKGTLV K A L S R I 4 1 2 1 0 0 1 1 0 0 1 1 0 0 0 1 0 0 1 1 0 0 15 1 1577.7798 P16403;A1L407;P22492;Q02539;Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402 Q4VB24 65 79 HIST1H1C;HIST1H1T;HIST1H1A;HIST1H1E;HIST1H1D Histone H1.2;Histone H1t;Histone H1.1;Histone H1.4;Histone H1.3 no no 3 0.011924 26.771 1 0.90554 1.1512 NaN 1 Median NaN NaN NaN 0 0 Median 0.90554 1.1512 NaN 1 0 Median 5433700 2334100 3099600 0 0 0 5433700 2334100 3099600 116 308;739 122 184 294 294 0 ALAAGGYDVEK ASKERNGLSLAALKKALAAGGYDVEKNNSR ALKKALAAGGYDVEKNNSRIKLGLKSLVSK K A L E K N 3 0 0 1 0 0 1 2 0 0 1 1 0 0 0 0 0 0 1 1 0 0 11 0 1092.5451 P16401 P16401 68 78 HIST1H1B Histone H1.5 yes yes 2 0.0001088 93.111 1 1 0.56165 0.70444 16.772 2 Median 0.6349 0.79313 NaN 1 0 Median 0.49686 0.62566 NaN 1 0 Median 257160000 177100000 80054000 15073000 8990100 6083300 242080000 168110000 73971000 117 738 123 185;186 295;296;297;298;299;300;301 296 7 ALDQSDNDMSAVYR TPMAAAANEVYKRAKALDQSDNDMSAVYRA KALDQSDNDMSAVYRAYIH___________ K A L Y R A 2 1 1 3 0 1 0 0 0 0 1 0 1 0 0 2 0 0 1 1 0 0 14 0 1583.6886 K7EMM8;D3DUE6;D3DUE7;Q49A26 K7EMM8 507 520 GLYR1;N-PAC Putative oxidoreductase GLYR1 yes no 2 0.0030497 46.797 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 118 592 124 187 302 302 121 883 0 ALEAASLSQHPPSLCISDSEEEEEERK QNKGSKRRQLLATLRALEAASLSQHPPSLC SLCISDSEEEEEERKKKCPKKASFASASAE R A L R K K 3 1 0 1 1 1 7 0 1 1 3 1 0 0 2 5 0 0 0 0 0 0 27 1 3040.3931 E9PPY3;O43159 E9PPY3 46 72 RRP8 Ribosomal RNA-processing protein 8 yes no 4 1.1208E-16 59.496 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 119 628 125 188 303 303 954;955 0 ALEDLAGFK PGSKRQLQTPKEKAQALEDLAGFKELFQTP PKEKAQALEDLAGFKELFQTPGHTEELVAA Q A L F K E 2 0 0 1 0 0 1 1 0 0 2 1 0 1 0 0 0 0 0 0 0 0 9 0 962.5073 P46013 P46013 1220 1228 MKI67 Antigen KI-67 yes yes 2 0.00097891 75.213 1 1.0694 1.3529 NaN 1 Median NaN NaN NaN 0 0 Median 1.0694 1.3529 NaN 1 0 Median 8110500 3782500 4328000 0 0 0 8110500 3782500 4328000 120 762 126 189 304;305 304 2 ALEEANADLEVK QNLNDRLASYLDKVRALEEANADLEVKIRD KVRALEEANADLEVKIRDWYQRQRPAEIKD R A L V K I 3 0 1 1 0 0 3 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 12 0 1300.6511 CON__P02533;P02533;CON__Q6IFX2;B4DL17;K7ERE3;CON__ENSEMBL:ENSP00000377550;CON__P19012;B3KVF5;CON__P13646-1;A8K2H9;A1A4E9;P19012;P13646;B4DWU0;K7EMD9;B4E2J5;B4E204;CON__P08779;P08779 CON__P02533 135 146 KRT14;KRT13;KRT15;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 13;Keratin, type I cytoskeletal 16 no no 2 0.0080752 41.283 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3623200 3623200 0 0 0 0 3623200 3623200 0 + 121 571;577 127 190 306;307 307 2 ALEEGDGSVSGSSPR LELELVLERKKAELRALEEGDGSVSGSSPR ALEEGDGSVSGSSPRSDISQPASQDGMRRL R A L P R S 1 1 0 1 0 0 2 3 0 0 1 0 0 0 1 4 0 0 0 1 0 0 15 0 1446.6587 B3KNP0;D3DQS4;Q8N3X1 B3KNP0 420 434 FNBP4 Formin-binding protein 4 yes no 2 1.1639E-06 73.834 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 122 434 128 191 308 308 638 0 ALEESNYELEGK QNLNDRLASYLDKVRALEESNYELEGKIKE KVRALEESNYELEGKIKEWYEKHGNSHQGE R A L G K I 1 0 1 0 0 0 4 1 0 0 2 1 0 0 0 1 0 0 1 0 0 0 12 0 1380.6409 CON__P13645;P13645;CON__P02535-1 CON__P13645 166 177 KRT10 Keratin, type I cytoskeletal 10 yes no 2 1.2951E-26 105.98 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 28856000 28856000 0 0 0 0 28856000 28856000 0 + 123 579 129 192 309 309 1 ALEVEESNSEDEASFK GEKVKAESEPREAKKALEVEESNSEDEASF LEVEESNSEDEASFKSESAQSSPSNSSSSS K A L F K S 2 0 1 1 0 0 5 0 0 0 1 1 0 1 0 3 0 0 0 1 0 0 16 0 1782.7796 Q03111 Q03111 353 368 MLLT1 Protein ENL yes yes 2 0.00051346 49.621 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 124 797 130 193 310 310 1280;1281 0 ALLSLRSPK ARRASRTRLAAWARRALLSLRSPKARRGKA AAWARRALLSLRSPKARRGKARRRAAKLQS R A L P K A 1 1 0 0 0 0 0 0 0 0 3 1 0 0 1 2 0 0 0 0 0 0 9 1 983.61277 Q5H909;A0A024R9Y7;Q9UNF1 Q5H909 223 231 MAGED2 Melanoma-associated antigen D2 yes no 2 0.027974 56.043 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 125 123 131 194 311 311 176 0 ALNHEIEELEK IKLQEELSENDKKIKALNHEIEELEKRKDK KKIKALNHEIEELEKRKDKETGGILRSLED K A L E K R 1 0 1 0 0 0 4 0 1 1 2 1 0 0 0 0 0 0 0 0 0 0 11 0 1323.667 B7ZLZ7;A0A024R158;O95347;A8K984;B3KMB1;Q2KQ72;Q05BV1;Q6IPS5;Q7Z2X1;A0JLM9;Q5T821 B7ZLZ7 276 286 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 yes no 2;3 2.5431E-51 123.51 2 0.62254 0.78236 NaN 1 Median NaN NaN NaN 0 0 Median 0.62254 0.78236 NaN 1 0 Median 77306000 58254000 19052000 0 0 0 77306000 58254000 19052000 126 27 132 195;196 312;313 313 2 ALNTLSSPGQSSFSHGTR IPGKTILENSVKHSKALNTLSSPGQSSFSH TLSSPGQSSFSHGTRNNSAKENMEKEKPVK K A L T R N 1 1 1 0 0 1 0 2 1 0 2 0 0 1 1 5 2 0 0 0 0 0 18 0 1845.8969 Q8WWQ0;Q9NWP3 Q8WWQ0 1554 1571 PHIP PH-interacting protein yes no 2;3 1.3515E-41 126.02 4 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 127 894 133;134 197;198;199;200;201;202;203 314;315;316;317;318;319;320;321;322;323;324 318 1498;1499;1500 0 ALPSLNTGSSSPR EELLIDHQTSCNPSRALPSLNTGSSSPRGV SRALPSLNTGSSSPRGVEEPDVIFQNFLQQ R A L P R G 1 1 1 0 0 0 0 1 0 0 2 0 0 0 2 4 1 0 0 0 0 0 13 0 1285.6626 A0A024RBK4;O14545 A0A024RBK4 317 329 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes no 2 0.0002012 78.814 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 128 147 135 204 325;326 325 208;209;210 0 ALQALQNEPIPERSPQNGESGK EGKTRQAARHNAAMKALQALQNEPIPERSP EPIPERSPQNGESGKDVDDDKDANKSEISL K A L G K D 2 1 2 0 0 3 3 2 0 1 2 1 0 0 3 2 0 0 0 0 0 0 22 1 2362.1877 E5RFK1;E5RJN7;E7EVI1;B7Z1P6;A0A0A0MTC4;A0A0A0MTD1;Q2TBD5;F8VPI7;A8K276;Q4LE57;E7EPX0;A0A0A0MTC6;E7EVJ4;E9PH62;A0A0A0MTC5;A0A024R7X7;Q9NUL3 E5RFK1 143 164 STAU2;STAU2 variant protein Double-stranded RNA-binding protein Staufen homolog 2 yes no 3 2.9176E-31 111.58 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 129 97 136 205 327 327 137 0 ALSSDSILSPAPDAR TPDWVSEGPQPGLRRALSSDSILSPAPDAR ALSSDSILSPAPDARAADPAPEVRKVNRIP R A L A R A 3 1 0 2 0 0 0 0 0 1 2 0 0 0 2 4 0 0 0 0 0 0 15 0 1498.7627 Q8IVT2 Q8IVT2 392 406 MISP Mitotic interactor and substrate of PLK1 yes yes 2 1.2706E-06 72.184 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 130 873 137;138 206;207;208 328;329;330;331 329 1460;1461;1462 0 ALVDGPCTQVR AGKLVAIVDVIDQNRALVDGPCTQVRRQAM DQNRALVDGPCTQVRRQAMPFKCMQLTDFI R A L V R R 1 1 0 1 1 1 0 1 0 0 1 0 0 0 1 0 1 0 0 2 0 0 11 0 1214.6078 A8K7N0;Q6IPH7;P50914;E7EPB3;A0PJ62;B7Z6S8;A8K3Q9 A8K7N0 36 46 RPL14 60S ribosomal protein L14 yes no 2 0.026904 36.334 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2457700 2457700 0 0 0 0 2457700 2457700 0 131 370 139 209 332 332 1 ALVEFESNPEETREPGSPPSVQR PESPESLTSVSRTRRALVEFESNPEETREP PEETREPGSPPSVQRAGLGSPERPPKTSPG R A L Q R A 1 2 1 0 0 1 5 1 0 0 1 0 0 1 4 3 1 0 0 2 0 0 23 1 2554.23 Q9H6F5;H0YG79 Q9H6F5 31 53 CCDC86 Coiled-coil domain-containing protein 86 yes no 3 0 213.78 2 3 0.45504 0.65466 NaN 1 Median NaN NaN NaN 0 0 Median 0.45504 0.65466 NaN 1 0 Median 8396300 5539800 2856500 0 0 0 8396300 5539800 2856500 132 927 140;141 210;211;212;213;214 333;334;335;336;337;338;339;340;341 335 1618;2040 3 ALVNCQYSSATFSTGER LFQIRGSRARALPDRALVNCQYSSATFSTG VNCQYSSATFSTGERKRRPHGDRKSCEMGL R A L E R K 2 1 1 0 1 1 1 1 0 0 1 0 0 1 0 3 2 0 1 1 0 0 17 0 1889.8578 E9PI41;Q9NPD3 E9PI41 93 109 EXOSC4 Exosome complex component RRP41 yes no 2 0.0079056 33.204 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3671000 3671000 0 0 0 0 3671000 3671000 0 133 618 142 215 342;343 342 2 ALVQNDTLLQVK FDQQNGRTYLKYSIKALVQNDTLLQVKGTG SIKALVQNDTLLQVKGTGANGSFKLNRKKL K A L V K G 1 0 1 1 0 2 0 0 0 0 3 1 0 0 0 0 1 0 0 2 0 0 12 0 1340.7664 Q92522 Q92522 95 106 H1FX Histone H1x yes yes 2 0.00065181 89.08 1 0.49762 0.62396 NaN 1 Median NaN NaN NaN 0 0 Median 0.49762 0.62396 NaN 1 0 Median 8929600 6631500 2298200 0 0 0 8929600 6631500 2298200 134 898 143 216 344 344 1 AMGIMNSFVNDIFER KVLKQVHPDTGISSKAMGIMNSFVNDIFER AMGIMNSFVNDIFERIAGEASRLAHYNKRS K A M E R I 1 1 2 1 0 0 1 1 0 2 0 0 2 2 0 1 0 0 0 1 0 0 15 0 1742.812 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;P57053;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257 A0A024RCJ2 59 73 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B no no 2 3.7235E-128 169.89 2 0.45086 0.64222 13.283 2 Median NaN NaN NaN 0 0 Median 0.45086 0.64222 13.283 2 0 Median 1942600000 1334100000 608490000 0 0 0 1942600000 1334100000 608490000 135 10;158 144 217;218 345;346;347;348;349 345 0;1 5 ANATVDGLEQGYVVCPSEK SLKKEPLYVGVDDDKANATVDGLEQGYVVC VDGLEQGYVVCPSEKRFLLLFTFLKKNRKK K A N E K R 2 0 1 1 1 1 2 2 0 0 1 1 0 0 1 1 1 0 1 3 0 0 19 0 2035.9521 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254;Q59FR7 Q4ZG72 269 287 DDX18 ATP-dependent RNA helicase DDX18 yes no 2 2.6136E-10 76.588 1 1.0581 1.2697 NaN 1 Median 1.0581 1.2697 NaN 1 0 Median NaN NaN NaN 0 0 Median 9779400 4565700 5213700 9779400 4565700 5213700 0 0 0 136 130 145 219 350;351;352 351 3 ANCIDSTASAEAVFASEVK HTFLRNGGHFVISIKANCIDSTASAEAVFA DSTASAEAVFASEVKKMQQENMKPQEQLTL K A N V K K 5 0 1 1 1 0 2 0 0 1 0 1 0 1 0 3 1 0 0 2 0 0 19 0 1968.9099 Q96BS4;P22087;M0QXL5;M0R2Q4;B4DLD4;M0R299 Q96BS4 205 223 FBL rRNA 2-O-methyltransferase fibrillarin yes no 2 2.3963E-13 93.823 1 1 0.73114 0.89757 NaN 1 Median 0.73114 0.89757 NaN 1 0 Median NaN NaN NaN 0 0 Median 33385000 20647000 12738000 27445000 14707000 12738000 5939700 5939700 0 137 747 146 220;221 353;354;355;356 353 4 ANPFGGASHAK HDKQYKKAHLGTALKANPFGGASHAKGIVL TALKANPFGGASHAKGIVLEKVGVEAKQPN K A N A K G 3 0 1 0 0 0 0 2 1 0 0 1 0 1 1 1 0 0 0 0 0 0 11 0 1055.5148 A8K517;P62266;D6RD47;D6RDJ2;D6RIX0;D6R9I7 A8K517 38 48 RPS23 40S ribosomal protein S23 yes no 2;3 8.5492E-05 94.409 3 2 0.63407 0.79819 1.4121 2 Median NaN NaN NaN 0 0 Median 0.63407 0.79819 1.4121 2 0 Median 803850000 501770000 302080000 14469000 10172000 4297300 789380000 491600000 297780000 138 358 147 222;223;224;225;226 357;358;359;360;361;362;363;364;365;366 361 10 ANSPEKPPEAGAAHK ISEELVAASRTQVQKANSPEKPPEAGAAHK ANSPEKPPEAGAAHKPRARLAALKRPDDVP K A N H K P 4 0 1 0 0 0 2 1 1 0 0 2 0 0 3 1 0 0 0 0 0 0 15 1 1502.7478 F8WDB4;A0A140VJD0;Q9UFC0;Q59FT0 F8WDB4 58 72 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 yes no 3 4.3073E-05 61.102 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 139 278 148 227 367 367 391 0 ANSPEKPPEAGAAHKPR ISEELVAASRTQVQKANSPEKPPEAGAAHK SPEKPPEAGAAHKPRARLAALKRPDDVPLS K A N P R A 4 1 1 0 0 0 2 1 1 0 0 2 0 0 4 1 0 0 0 0 0 0 17 2 1755.9016 F8WDB4;A0A140VJD0;Q9UFC0;Q59FT0 F8WDB4 58 74 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 yes no 4 4.8985E-06 56.215 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 140 278 149 228 368 368 391 0 ANYAVDAYFR IAFTEWIEPPKRERKANYAVDAYFREALRV KRERKANYAVDAYFREALRVSEPKAPKAPR K A N F R E 3 1 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 2 1 0 0 10 0 1188.5564 B7ZAX9;B4DZC0;O60264;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;D7EZH4 B7ZAX9 683 692 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 yes no 2 0.014572 48.091 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3072100 0 3072100 0 0 0 3072100 0 3072100 141 510 150 229 369 369 1 APGASPGNPLSPSLSDK VQKITSPSLKKFACKAPGASPGNPLSPSLS GASPGNPLSPSLSDKDRGLKGAGGSPVGVE K A P D K D 2 0 1 1 0 0 0 2 0 0 2 1 0 0 4 4 0 0 0 0 0 0 17 0 1593.7999 Q7Z5J4 Q7Z5J4 1348 1364 RAI1 Retinoic acid-induced protein 1 yes yes 2 1.9794E-58 118.66 3 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 142 870 151;152 230;231;232;233 370;371;372;373 371 1449;1450;1451 0 APGASPGNPLSPSLSDKDR VQKITSPSLKKFACKAPGASPGNPLSPSLS SPGNPLSPSLSDKDRGLKGAGGSPVGVEEG K A P D R G 2 1 1 2 0 0 0 2 0 0 2 1 0 0 4 4 0 0 0 0 0 0 19 1 1864.9279 Q7Z5J4 Q7Z5J4 1348 1366 RAI1 Retinoic acid-induced protein 1 yes yes 2 2.9055E-08 62.362 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 143 870 153 234 374 374 1449;1450;1451 0 APIDTSDVEEK ESIANQRITAFKMEKAPIDTSDVEEKAEEI KMEKAPIDTSDVEEKAEEIIAEAEPPSEVV K A P E K A 1 0 0 2 0 0 2 0 0 1 0 1 0 0 1 1 1 0 0 1 0 0 11 0 1202.5667 B4DXG8;D6RIY6;A5PLM5;Q06265 B4DXG8 301 311 EXOSC9 Exosome complex component RRP45 yes no 2 1.9719E-51 137.95 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 144 322 154 235 375;376 376 492 0 APIRPDIVNFVHTNLR GESSGKNVTLPAVFKAPIRPDIVNFVHTNL PIRPDIVNFVHTNLRKNNRQPYAVSELAGH K A P L R K 1 2 2 1 0 0 0 0 1 2 1 0 0 1 2 0 1 0 0 2 0 0 16 1 1861.0323 Q59GY2;P36578;B4DMJ6;B4DFI6;H3BU31;B4DP82;H3BTP7 Q59GY2 44 59 RPL4 60S ribosomal protein L4 yes no 3;4 1.2957E-07 82.837 2 0.67203 1.1179 7.744 2 Median NaN NaN NaN 0 0 Median 0.67203 1.1179 7.744 2 0 Median 86938000 53233000 33705000 0 0 0 86938000 53233000 33705000 145 755 155 236;237 377;378;379 377 3 APLKPYPVSPSDK SVIESHTEFIFTTIKAPLKPYPVSPSDKVL IKAPLKPYPVSPSDKVLIQEKTQLKGSELE K A P D K V 1 0 0 1 0 0 0 0 0 0 1 2 0 0 4 2 0 0 1 1 0 0 13 1 1397.7555 Q9P1N9;Q7L4K8;B4DVX2;Q7Z355;J3KR24;Q7Z3U5;A0A0A0MSX9;Q59G75;P41252;Q5TCC6;Q6P0M4 Q9P1N9 141 153 IARS;DKFZp686L17145;DKFZp686L0869 Isoleucine--tRNA ligase, cytoplasmic yes no 2;3 1.6423E-15 113.76 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 146 222 156 238;239;240 380;381;382 381 310 0 APLNIPGTPVLEDFPQNDDEK PPGPERVFPMPLPRKAPLNIPGTPVLEDFP GTPVLEDFPQNDDEKERLQRRRSRVFDLQF K A P E K E 1 0 2 3 0 1 2 1 0 1 2 1 0 1 4 0 1 0 0 1 0 0 21 0 2308.1223 B4DRG7;E9PHA2;A8K4T8;Q15003;C9J470;C9JZP1 B4DRG7 18 38 NCAPH Condensin complex subunit 2 yes no 2 2.1426E-59 134.88 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 147 354 157 241;242 383;384;385 385 1850 0 APLQQCAEDR LELPELGCVEMTDLKAPLQQCAEDRQICPS MTDLKAPLQQCAEDRQICPSLAGFQFTQWD K A P D R Q 2 1 0 1 1 2 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 10 0 1186.5401 B4DRG7;E9PHA2;A8K4T8;Q15003;C9J470;C9JZP1 B4DRG7 280 289 NCAPH Condensin complex subunit 2 yes no 2 0.009583 58.916 1 0.45138 0.49977 NaN 1 Median NaN NaN NaN 0 0 Median 0.45138 0.49977 NaN 1 0 Median 1675000 1090300 584610 0 0 0 1675000 1090300 584610 148 354 158 243 386 386 1 APNTPASGANGDGSMSQTQSGSTVK ASIVVYWNYQNSTCRAPNTPASGANGDGSM GDGSMSQTQSGSTVKATYATSDFTLLELNN R A P V K A 3 0 2 1 0 2 0 4 0 0 0 1 1 0 2 5 3 0 0 1 0 0 25 0 2349.0503 CON__P15636 CON__P15636 287 311 yes yes 2 5.1944E-32 84.035 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 7005600 7005600 0 7005600 7005600 0 0 0 0 + 149 581 159 244 387 387 117 1 APPQTHLPSGASSGTGSASATHGGGSPPGTR QEYNVGGKVIHLVERAPPQTHLPSGASSGT SASATHGGGSPPGTRGPGASVHDRNANSYV R A P T R G 4 1 0 0 0 1 0 7 2 0 1 0 0 0 5 6 4 0 0 0 0 0 31 0 2784.3175 F6TC96;F6UR09;F6U1F2;F6XTU0;A0A0G2JJR8;A0A1B0GX79;F6WML8;F6VEM6;F6X9W3;F6U341;F6S6P2;X6REW1;A0A0G2JJM1;A0A0G2JL47;A0A024RCR6;A0A0G2JK23;P46379 F6TC96 88 118 BAG6;BAT3 Large proline-rich protein BAG6 yes no 4 1.1649E-34 90.338 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 150 162 160 245 388 388 224 0 APRPTRPDK RVRCWQYRQLSALHRAPRPTRPDKARRLGY LSALHRAPRPTRPDKARRLGYKAKQGYVIY R A P D K A 1 2 0 1 0 0 0 0 0 0 0 1 0 0 3 0 1 0 0 0 0 0 9 2 1036.5778 A0A024R2Q4;P61313;B4DLP4;E7EQV9;E7ENU7;E7EX53;B4DEN1;E7ERA2;Q76N55 A0A024R2Q4 39 47 RPL15 Ribosomal protein L15;60S ribosomal protein L15 yes no 3 0.00018586 65.627 2 0.46091 0.63837 6.2305 2 Median NaN NaN NaN 0 0 Median 0.46091 0.63837 6.2305 2 0 Median 83629000 57519000 26110000 0 0 0 83629000 57519000 26110000 151 50 161 246;247 389;390;391;392 390 4 APSLTNDEVEEFR KELVRSQADKVIEPRAPSLTNDEVEEFRAY PRAPSLTNDEVEEFRAYFNEKMSILQKGGK R A P F R A 1 1 1 1 0 0 3 0 0 0 1 0 0 1 1 1 1 0 0 1 0 0 13 0 1505.6998 Q86VR6;B4DKX3;E9PIF2;Q59EC7;Q13206 Q86VR6 537 549 DDX10 Probable ATP-dependent RNA helicase DDX10 yes no 2 3.0105E-06 92.039 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 152 475 162 248;249 393;394 394 684 0 APSPASFQR PSYQTPPSLPNHISRAPSPASFQRSLENRM PNHISRAPSPASFQRSLENRMSPSKSPFLP R A P Q R S 2 1 0 0 0 1 0 0 0 0 0 0 0 1 2 2 0 0 0 0 0 0 9 0 959.48248 B4DYC0;A0A1B0GV63;A0A1B0GWJ2;A0A1B0GTJ8;A0A1B0GVK1;H0Y7H8;Q8NFD5 B4DYC0 61 69 ARID1B AT-rich interactive domain-containing protein 1B yes no 2 0.0016891 63.073 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 153 285 163 250 395 395 424 0 APTAALPQGVVMAASPGSLHSPQQLAEEATR ______________________________ GSLHSPQQLAEEATRKRELRLMKNREAARE R A P T R K 7 1 0 0 0 3 2 2 1 0 3 0 1 0 4 3 2 0 0 2 0 0 31 0 3084.5662 E9PAR2;E9PB41;Q59FC7;C9IYM9;C9K092;J3KR46;G5E998;J3KQC0;Q03060 E9PAR2 8 38 CREM cAMP-responsive element modulator yes no 3 7.7686E-35 90.832 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 154 557 164 251 396 396 108 834;835 0 APVPSTCSSTFPEELSPPSHQAK DGLNLNEDLENFLQKAPVPSTCSSTFPEEL STFPEELSPPSHQAKREIRFLELQKVASSS K A P A K R 2 0 0 0 1 1 2 0 1 0 1 1 0 1 5 5 2 0 0 1 0 0 23 0 2453.1533 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;A0A024R5G4;F5H4J1;A8K394;Q3SYK8;F5H6Y5;F5H0Z7;F5H763;Q86XH4 A0A087WY61 154 176 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 yes no 3 1.292E-07 40.454 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 155 71 165 252 397 397 85 0 APVQPQQSPAAAPGGTDEKPSGK ______________________________ PAAAPGGTDEKPSGKERRDAGDKDKEQELV K A P G K E 4 0 0 1 0 3 1 3 0 0 0 2 0 0 5 2 1 0 0 1 0 0 23 1 2217.1026 F8WBS8;C9JPC0;Q9NSM5;B4DM22;Q59EG8;Q13200 F8WBS8 9 31 PSMD2;DKFZp564A2282 26S proteasome non-ATPase regulatory subunit 2 yes no 3 1.2295E-16 75.416 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 156 480 166 253 398 398 697 0 AQAAAPASVPAQAPK LCRPKAKAKAKDQTKAQAAAPASVPAQAPK AQAAAPASVPAQAPKRTQAPTKASE_____ K A Q P K R 7 0 0 0 0 2 0 0 0 0 0 1 0 0 3 1 0 0 0 1 0 0 15 0 1376.7412 A0A024R326;Q6IPI1;P47914 A0A024R326 133 147 RPL29 60S ribosomal protein L29 yes no 2 0.00073687 46.408 1 1 0.52001 0.66723 NaN 1 Median NaN NaN NaN 0 0 Median 0.52001 0.66723 NaN 1 0 Median 7249000 4902000 2347000 0 0 0 7249000 4902000 2347000 157 52 167;168 254;255 399;400 399 53 0 AQALEDLAGFK TLPGSKRQLQTPKEKAQALEDLAGFKELFQ PKEKAQALEDLAGFKELFQTPGHTEELVAA K A Q F K E 3 0 0 1 0 1 1 1 0 0 2 1 0 1 0 0 0 0 0 0 0 0 11 0 1161.603 P46013 P46013 1218 1228 MKI67 Antigen KI-67 yes no 2 0.0032819 82.287 1 1 1.1842 1.4127 13.51 2 Median 1.3457 1.5544 NaN 1 0 Median 1.042 1.284 NaN 1 0 Median 25515000 10499000 15016000 2260900 1006900 1254000 23254000 9491900 13762000 158 762 169 256;257 401;402 402 2 AQALEELTGFR NLPGSNRRLQTRKEKAQALEELTGFRELFQ RKEKAQALEELTGFRELFQTPCTDNPTTDE K A Q F R E 2 1 0 0 0 1 2 1 0 0 2 0 0 1 0 0 1 0 0 0 0 0 11 0 1233.6354 P46013 P46013 1826 1836 MKI67 Antigen KI-67 yes yes 2 0.00057065 70.1 1 1.0931 1.4573 NaN 1 Median NaN NaN NaN 0 0 Median 1.0931 1.4573 NaN 1 0 Median 10443000 4832600 5610500 0 0 0 10443000 4832600 5610500 159 762 170 258 403 403 1 AQELGHSQSALASAQR RDSALETLQGQLEEKAQELGHSQSALASAQ QELGHSQSALASAQRELAAFRTKVQDHSKA K A Q Q R E 4 1 0 0 0 3 1 1 1 0 2 0 0 0 0 3 0 0 0 0 0 0 16 0 1652.823 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q59HB8;Q96HN5;H0YFY6;Q7Z757;A0A024R5G4 A0A087WY61 1175 1190 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 yes no 3 0.0013767 42.338 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 7665200 7665200 0 0 0 0 7665200 7665200 0 160 71 171 259 404 404 1 AQHEDQVEQYK REFESRLADALQELRAQHEDQVEQYKKELE QELRAQHEDQVEQYKKELEKTYSAKLDNAR R A Q Y K K 1 0 0 1 0 3 2 0 1 0 0 1 0 0 0 0 0 0 1 1 0 0 11 0 1373.6212 P02545;W8QEH3;Q5I6Y5;Q8N519;Q3BDU5;Q5TCI8;H0YAB0 P02545 250 260 LMNA Prelamin-A/C;Lamin-A/C yes no 3 0.016494 22.055 1 1.4445 1.8204 NaN 1 Median NaN NaN NaN 0 0 Median 1.4445 1.8204 NaN 1 0 Median 8452800 3181700 5271100 0 0 0 8452800 3181700 5271100 161 725 172 260 405 405 1 AQHEDQVEQYKK REFESRLADALQELRAQHEDQVEQYKKELE ELRAQHEDQVEQYKKELEKTYSAKLDNARQ R A Q K K E 1 0 0 1 0 3 2 0 1 0 0 2 0 0 0 0 0 0 1 1 0 0 12 1 1501.7161 P02545;W8QEH3;Q5I6Y5;Q8N519;Q3BDU5;Q5TCI8;H0YAB0 P02545 250 261 LMNA Prelamin-A/C;Lamin-A/C yes no 3 0.026656 14.687 1 0.62092 0.76824 NaN 1 Median 0.62092 0.76824 NaN 1 0 Median NaN NaN NaN 0 0 Median 15309000 10044000 5264500 15309000 10044000 5264500 0 0 0 162 725 173 261 406 406 0 AQLEPVASPAK INAIKDYELQLVTYKAQLEPVASPAKKPKV VTYKAQLEPVASPAKKPKVQSGSESVIQEY K A Q A K K 3 0 0 0 0 1 1 0 0 0 1 1 0 0 2 1 0 0 0 1 0 0 11 0 1109.6081 Q15149 Q15149 1428 1438 PLEC Plectin yes yes 2 2.4182E-65 144.28 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 163 822 174 262 407;408 408 1354 0 AQLGLGHSYSR FHNLVKGLTDLSACKAQLGLGHSYSRAKVK SACKAQLGLGHSYSRAKVKFNVNRVDNMII K A Q S R A 1 1 0 0 0 1 0 2 1 0 2 0 0 0 0 2 0 0 1 0 0 0 11 0 1187.6047 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 144 154 NOP56 Nucleolar protein 56 yes no 3 0.0094418 34.386 1 0.49333 0.67788 NaN 1 Median NaN NaN NaN 0 0 Median 0.49333 0.67788 NaN 1 0 Median 47945000 30228000 17717000 0 0 0 47945000 30228000 17717000 164 379 175 263 409 409 1 AQPLEDLAGFTELSETSGHTQESLTAGK EEEPSRRRPRAPKEKAQPLEDLAGFTELSE SETSGHTQESLTAGKATKIPCESPPLEVVD K A Q G K A 3 0 0 1 0 2 4 3 1 0 4 1 0 1 1 3 4 0 0 0 0 0 28 0 2916.3989 P46013 P46013 2673 2700 MKI67 Antigen KI-67 yes yes 3 7.9091E-80 131.97 1 1 1.028 1.267 2.7675 2 Median 1.0705 1.2921 NaN 1 0 Median 0.98707 1.2425 NaN 1 0 Median 330560000 165450000 165100000 6175700 3192600 2983200 324380000 162260000 162120000 165 762 176 264;265 410;411 411 2 AQPLEDLAGLK ASVTGSKRHPKTKEKAQPLEDLAGLKELFQ TKEKAQPLEDLAGLKELFQTPVCTDKPTTH K A Q L K E 2 0 0 1 0 1 1 1 0 0 3 1 0 0 1 0 0 0 0 0 0 0 11 0 1153.6343 P46013 P46013 1461 1471 MKI67 Antigen KI-67 yes no 2 0.02723 44.425 1 1.0906 1.3857 NaN 1 Median NaN NaN NaN 0 0 Median 1.0906 1.3857 NaN 1 0 Median 10707000 5813500 4893600 0 0 0 10707000 5813500 4893600 166 762 177 266 412 412 0 AQSLVISPPAPSPR SGKQESGSEIHVEVKAQSLVISPPAPSPRK KAQSLVISPPAPSPRKTPVASDQRRRSCKT K A Q P R K 2 1 0 0 0 1 0 0 0 1 1 0 0 0 4 3 0 0 0 1 0 0 14 0 1418.7882 P46013;Q70L73 P46013 573 586 MKI67 Antigen KI-67 no no 2 2.2479E-144 176.25 2 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1071300 0 1071300 0 0 0 1071300 0 1071300 167 762;865 178;179;180 267;268;269;270;271 413;414;415;416;417;418;419;420;421;422;423;424;425;426;427;428;429;430;431;432;433;434;435;436 413 1202;1203 1 AQSLVISPPAPSPRK SGKQESGSEIHVEVKAQSLVISPPAPSPRK AQSLVISPPAPSPRKTPVASDQRRRSCKTA K A Q R K T 2 1 0 0 0 1 0 0 0 1 1 1 0 0 4 3 0 0 0 1 0 0 15 1 1546.8831 P46013;Q70L73 P46013 573 587 MKI67 Antigen KI-67 no no 2;3 1.0072E-35 123.54 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 168 762;865 181 272;273;274;275 437;438;439;440;441;442;443;444;445;446;447 447 1202;1203 0 AQSYDIQAWK RKRKDHQPRRRLRNRAQSYDIQAWKKQCEE RLRNRAQSYDIQAWKKQCEELLNLIFQCED R A Q W K K 2 0 0 1 0 2 0 0 0 1 0 1 0 0 0 1 0 1 1 0 0 0 10 0 1208.5826 Q8WWQ0;Q9NWP3 Q8WWQ0 1313 1322 PHIP PH-interacting protein yes no 2 0.0004659 79.82 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 169 894 182 276;277 448;449 449 1501 0 AQSYDIQAWKK RKRKDHQPRRRLRNRAQSYDIQAWKKQCEE LRNRAQSYDIQAWKKQCEELLNLIFQCEDS R A Q K K Q 2 0 0 1 0 2 0 0 0 1 0 2 0 0 0 1 0 1 1 0 0 0 11 1 1336.6776 Q8WWQ0;Q9NWP3 Q8WWQ0 1313 1323 PHIP PH-interacting protein yes no 2 0.021598 45.879 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 170 894 183 278 450 450 1501 0 AQTLPTSVVTITSESSPGK HEVSASTQSTPASSRAQTLPTSVVTITSES PTSVVTITSESSPGKREKDKEKDKEKRFSL R A Q G K R 1 0 0 0 0 1 1 1 0 1 1 1 0 0 2 4 4 0 0 2 0 0 19 0 1901.9946 D6W5C0;K9MS24;B2ZZ89;A0A087WUZ3;Q01082;B4DIF8 D6W5C0 2240 2258 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 2 1.658E-05 51.875 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 171 185 184 279 451;452 451 257;258;259;1807;1808 0 AQTLPTSVVTITSESSPGKR HEVSASTQSTPASSRAQTLPTSVVTITSES TSVVTITSESSPGKREKDKEKDKEKRFSLF R A Q K R E 1 1 0 0 0 1 1 1 0 1 1 1 0 0 2 4 4 0 0 2 0 0 20 1 2058.0957 D6W5C0;K9MS24;B2ZZ89;A0A087WUZ3;Q01082;B4DIF8 D6W5C0 2240 2259 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 3 9.865E-74 136.56 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 172 185 185;186 280;281;282 453;454;455;456;457;458 454 257;258;259;1807;1808 0 AQTPPGPSLSGSK RQSHSGSISPYPKVKAQTPPGPSLSGSKSP VKAQTPPGPSLSGSKSPCPQEKSKDSLVQS K A Q S K S 1 0 0 0 0 1 0 2 0 0 1 1 0 0 3 3 1 0 0 0 0 0 13 0 1225.6303 A0A140VK53;Q9UQ35;O60382;I3L4D8 A0A140VK53 1001 1013 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 yes no 2 0.0020921 79.633 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 173 284 187 283 459;460 459 1826 0 AQYDELARK APKSQDLAKIMADIRAQYDELARKNREELD IMADIRAQYDELARKNREELDKYWSQQIEE R A Q R K N 2 1 0 1 0 1 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 9 1 1092.5564 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965 F8VZY9 254 262 KRT18 Keratin, type I cytoskeletal 18 yes no 2 0.011514 52.716 1 1.5622 2.0324 NaN 1 Median NaN NaN NaN 0 0 Median 1.5622 2.0324 NaN 1 0 Median 6857500 2654700 4202800 0 0 0 6857500 2654700 4202800 174 134 188 284 461 461 1 AQYEDIAQK NNRSLDLDSIIAEVKAQYEDIAQKSKAEAE IIAEVKAQYEDIAQKSKAEAESLYQSKYEE K A Q Q K S 2 0 0 1 0 2 1 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 9 0 1064.5138 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;H6VRG2;H6VRF9 H6VRG3 356 364 KRT1 Keratin, type II cytoskeletal 1 yes no 2 0.00012807 69.598 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 21214000 21214000 0 0 0 0 21214000 21214000 0 + 175 670 189 285 462 462 1 AQYEEIANR NNRNLDLDSIIAEVKAQYEEIANRSRTEAE IIAEVKAQYEEIANRSRTEAESWYQTKYEE K A Q N R S 2 1 1 0 0 1 2 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 9 0 1092.52 CON__P13647;P13647;B4E1T1;B4DL32;H0YI76;H0YIN9 CON__P13647 344 352 KRT5 Keratin, type II cytoskeletal 5 yes no 2 0.01409 49.418 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 5002100 5002100 0 0 0 0 5002100 5002100 0 + 176 580 190 286 463 463 1 ARDINTEQGQNVLEILQDCFEEK HLKNGYRRRFCRPSRARDINTEQGQNVLEI GQNVLEILQDCFEEKSLANDFSTNSTKSVP R A R E K S 1 1 2 2 1 3 4 1 0 2 2 1 0 1 0 0 1 0 0 1 0 0 23 1 2748.3025 Q03188 Q03188 23 45 CENPC Centromere protein C yes yes 3 0.021378 16.792 1 0.58179 0.7782 NaN 1 Median NaN NaN NaN 0 0 Median 0.58179 0.7782 NaN 1 0 Median 10057000 6217900 3838800 0 0 0 10057000 6217900 3838800 177 799 191 287 464 464 1 AREAAAGIQWSEEETEDEEEEK GEALLPIERAARKQKAREAAAGIQWSEEET IQWSEEETEDEEEEKEVTPESGPPKVEEAD K A R E K E 4 1 0 1 0 1 9 1 0 1 0 1 0 0 0 1 1 1 0 0 0 0 22 1 2535.0885 P46087;F5H5X6;F5GYR3 P46087 171 192 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes no 3 6.2676E-16 75.112 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 178 763 192;193 288;289 465;466;467 467 1228;1981 0 AREEAERELER EEAERRAQQQAEAERAREEAERELERWQLK EAERAREEAERELERWQLKANEALRLRLQA R A R E R W 2 3 0 0 0 0 5 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 11 2 1386.6852 Q15149 Q15149 1760 1770 PLEC Plectin yes yes 3 0.0054013 42.031 1 0.62893 0.81817 NaN 1 Median 0.62893 0.81817 NaN 1 0 Median NaN NaN NaN 0 0 Median 7812200 4961700 2850500 7812200 4961700 2850500 0 0 0 179 822 194 290 468 468 1 ARLPEELR CVISKTARLLSSEDRARLPEELRSLVQKRY LLSSEDRARLPEELRSLVQKRYELLEHKKR R A R L R S 1 2 0 0 0 0 2 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 8 1 982.55598 Q9UIG0 Q9UIG0 512 519 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 2;3 0.010358 65.305 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 18538000 0 18538000 0 0 0 18538000 0 18538000 180 952 195 291;292 469;470 469 2 ARVGGSDEEASGIPSR QREAHRKKSLEGMKKARVGGSDEEASGIPS RVGGSDEEASGIPSRTASLELDLFPEAKQK K A R S R T 2 2 0 1 0 0 2 3 0 1 0 0 0 0 1 3 0 0 0 1 0 0 16 1 1586.7649 H7C446;A8MV53;A0A0A6YYI3;A0A0B4J1V8;Q9NQ55 H7C446 114 129 PPAN;PPAN-P2RY11 Suppressor of SWI4 1 homolog yes no 2;3 7.0444E-47 129.51 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 181 675 196 293;294;295 471;472;473;474;475;476;477;478;479 479 1000 0 ASAGAEQTPGPLSQSPGLVK AKAFLYEPTTQASGRASAGAEQTPGPLSQS EQTPGPLSQSPGLVKQAKQMVGGQQLPALA R A S V K Q 3 0 0 0 0 2 1 3 0 0 2 1 0 0 3 3 1 0 0 1 0 0 20 0 1893.9796 B2RWP5;Q96L73;Q658U6;Q9H6B5;A0A1D8GZ55;A0A1D8GZ56;Q9H6H8 B2RWP5 2290 2309 NSD1;DKFZp666C163 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific yes no 2 6.6446E-10 56.407 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 182 422 197 296 480;481 480 619;620 0 ASAGHVAVSSPTPETGPLQR NPAMSPAVSQPCTPRASAGHVAVSSPTPET VAVSSPTPETGPLQRLLPKARPMSLSTIAI R A S Q R L 3 1 0 0 0 1 1 2 1 0 1 0 0 0 3 3 2 0 0 2 0 0 20 0 1960.9967 P42695;Q96FA6 P42695 1320 1339 NCAPD3 Condensin-2 complex subunit D3 yes no 2;3 2.8981E-38 118.31 5 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 183 759 198;199;200 297;298;299;300;301;302;303 482;483;484;485;486;487;488;489;490;491;492;493;494 489 1189;1190;1970 0 ASASGSGAQVGGPISSGSSASSVTVTR SRTVLCGTCGQPADKASASGSGAQVGGPIS PISSGSSASSVTVTRSYRSVGGSGGGSFGD K A S T R S 4 1 0 0 0 1 0 5 0 1 0 0 0 0 1 9 2 0 0 3 0 0 27 0 2364.1517 P02545;A0A0C4DGC5 P02545 598 624 LMNA Prelamin-A/C;Lamin-A/C yes no 2 0.0017377 27.324 1 1.5689 2.045 NaN 1 Median NaN NaN NaN 0 0 Median 1.5689 2.045 NaN 1 0 Median 12998000 4343800 8654300 0 0 0 12998000 4343800 8654300 184 725 201 304 495 495 1 ASAVSELSPR KPWPDATYGTGSASRASAVSELSPRERSPA GSASRASAVSELSPRERSPALKSPLQSVVV R A S P R E 2 1 0 0 0 0 1 0 0 0 1 0 0 0 1 3 0 0 0 1 0 0 10 0 1015.5298 Q9Y2W1;Q7Z5U1;Q05D20;Q6P0P7;Q6PJV4 Q9Y2W1 236 245 THRAP3 Thyroid hormone receptor-associated protein 3 yes no 2 5.9181E-64 147.24 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 185 963 202 305;306 496;497;498;499;500;501;502;503 498 1737 0 ASFDHSPDSLPLR ______________________________ KKASFDHSPDSLPLRSSGRQAKKKATETTD K A S L R S 1 1 0 2 0 0 0 0 1 0 2 0 0 1 2 3 0 0 0 0 0 0 13 0 1440.6997 Q8NB78 Q8NB78 12 24 KDM1B Lysine-specific histone demethylase 1B yes yes 2 0.0027846 50.145 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 186 884 203 307 504 504 1487 0 ASFIKDEGK TVASEKLKQLTKTGKASFIKDEGKDKALKS LTKTGKASFIKDEGKDKALKSSQAFFSKLQ K A S G K D 1 0 0 1 0 0 1 1 0 1 0 2 0 1 0 1 0 0 0 0 0 0 9 1 993.51311 O00566 O00566 628 636 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 yes yes 2 4.998E-05 95.608 1 0.6773 0.82764 NaN 1 Median NaN NaN NaN 0 0 Median 0.6773 0.82764 NaN 1 0 Median 8548200 4946700 3601500 0 0 0 8548200 4946700 3601500 187 695 204 308 505;506 506 2 ASGGSLQGHDAVLR LLMYLMDLTHLILDKASGGSLQGHDAVLRL KASGGSLQGHDAVLRLVEIRTLSSEDEEED K A S L R L 2 1 0 1 0 1 0 3 1 0 2 0 0 0 0 2 0 0 0 1 0 0 14 0 1366.6953 H0YJ17;Q8NEJ9;G3V4G1 H0YJ17 69 82 NGDN Neuroguidin yes no 3 1.3313E-05 66.285 1 0.52271 0.66855 NaN 1 Median NaN NaN NaN 0 0 Median 0.52271 0.66855 NaN 1 0 Median 17391000 10533000 6857800 0 0 0 17391000 10533000 6857800 188 655 205 309 507;508 508 2 ASGNYATVISHNPETK CCLEEKPGDRGKLARASGNYATVISHNPET SGNYATVISHNPETKKTRVKLPSGSKKVIS R A S T K K 2 0 2 0 0 0 1 1 1 1 0 1 0 0 1 2 2 0 1 1 0 0 16 0 1687.8166 E9PKZ0;P62917;G3V1A1;B4DVG7 E9PKZ0 129 144 RPL8 60S ribosomal protein L8 yes no 2 1.2947E-06 84.753 1 0.73874 0.91567 NaN 1 Median NaN NaN NaN 0 0 Median 0.73874 0.91567 NaN 1 0 Median 27715000 14465000 13250000 0 0 0 27715000 14465000 13250000 189 624 206 310 509;510 509 2 ASGNYATVISHNPETKK CCLEEKPGDRGKLARASGNYATVISHNPET GNYATVISHNPETKKTRVKLPSGSKKVISS R A S K K T 2 0 2 0 0 0 1 1 1 1 0 2 0 0 1 2 2 0 1 1 0 0 17 1 1815.9115 E9PKZ0;P62917;G3V1A1;B4DVG7 E9PKZ0 129 145 RPL8 60S ribosomal protein L8 yes no 3 3.5217E-06 57.52 1 1 0.58751 0.71859 41.159 2 Median 0.77642 0.96133 NaN 1 0 Median 0.44456 0.53713 NaN 1 0 Median 52512000 34418000 18094000 8727600 5110100 3617500 43784000 29308000 14477000 190 624 207 311;312 511;512;513 512 3 ASGPPVSELITK VKKKARKSAGAAKRKASGPPVSELITKVVA KRKASGPPVSELITKVVAASKERSGVSLAA K A S T K V 1 0 0 0 0 0 1 1 0 1 1 1 0 0 2 2 1 0 0 1 0 0 12 0 1197.6605 P16403;Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402 Q4VB24 35 46 HIST1H1C;HIST1H1E;HIST1H1D Histone H1.2;Histone H1.4;Histone H1.3 no no 2 0.00017702 89.507 3 3 0.78404 0.95885 12.615 2 Median 0.88312 1.0483 NaN 1 0 Median 0.69608 0.87702 NaN 1 0 Median 167390000 98901000 68494000 8136600 4419800 3716800 159260000 94481000 64777000 191 308;739 208;209 313;314;315;316;317;318 514;515;516;517;518;519;520;521;522;523 520 457;458;1152;1153 3 ASLEAAIADAEQR ISRLQAEIEGLKGQRASLEAAIADAEQRGE QRASLEAAIADAEQRGELAIKDANAKLSEL R A S Q R G 5 1 0 1 0 1 2 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 13 0 1343.6681 CON__P05787;P05787;Q969I0;Q7L4M3;CON__H-INV:HIT000292931 CON__P05787 329 341 KRT8 Keratin, type II cytoskeletal 8 yes no 2 2.0976E-09 82.069 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 + 192 575 210 319 524;525 525 855 0 ASLGSLEGEAEAEASSPK EASISGSKGDLKSSKASLGSLEGEAEAEAS GSLEGEAEAEASSPKGKFSLFKSKKPRHRS K A S P K G 4 0 0 0 0 0 4 2 0 0 2 1 0 0 1 4 0 0 0 0 0 0 18 0 1731.8163 Q09666 Q09666 5748 5765 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 2 1.221E-17 100.04 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 193 804 211 320 526 526 1313 0 ASMSEFLESEDGEVEQQR TPITHILVCRPKRTKASMSEFLESEDGEVE SEFLESEDGEVEQQRTYSSGHNRLYFHSDT K A S Q R T 1 1 0 1 0 2 5 1 0 0 1 0 1 1 0 3 0 0 0 1 0 0 18 0 2069.8848 J3QQW9;A8K1U9;Q15022 J3QQW9 515 532 SUZ12 Polycomb protein SUZ12 yes no 2 8.2401E-137 173.28 1 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 194 342 212 321;322;323;324 527;528;529;530;531;532;533;534 532 70 517;518;519 0 ASPAGTAGGPGAGAAAGGTGPLAAR SAPAALPSSTAAENKASPAGTAGGPGAGAA GAGAAAGGTGPLAARAGEPAERRGAAPVSA K A S A R A 9 1 0 0 0 0 0 8 0 0 1 0 0 0 3 1 2 0 0 0 0 0 25 0 1962.9872 Q12962 Q12962 43 67 TAF10 Transcription initiation factor TFIID subunit 10 yes yes 2 3.3308E-17 63.184 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 195 807 213 325 535 535 1325 0 ASPAVALPK VVKIRRLSLSPKKNKASPAVALPKRRCTAS SPKKNKASPAVALPKRRCTASVNYKEPTLA K A S P K R 3 0 0 0 0 0 0 0 0 0 1 1 0 0 2 1 0 0 0 1 0 0 9 0 852.5069 B5BUA4;Q5FBB7;A0A024R2J4 B5BUA4 467 475 SGOL1 Shugoshin-like 1 yes no 2 0.0038522 51.276 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 196 529 214 326 536;537 536 767 0 ASPITNDGEDEFVPSDGLDK DDDDDNNDLEELKVKASPITNDGEDEFVPS NDGEDEFVPSDGLDKDEYTFSPGKSKATPE K A S D K D 1 0 1 4 0 0 2 2 0 1 1 1 0 1 2 2 1 0 0 1 0 0 20 0 2104.9437 Q02880;Q71UH4;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q02880 1399 1418 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 2 2.1155E-09 52.03 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 197 796 215 327 538 538 1269;1270 0 ASPPSLEQPYLTHR AGMGDVVNIWAGQGKASPPSLEQPYLTHRL KASPPSLEQPYLTHRLSGPVHGLQFCPFED K A S H R L 1 1 0 0 0 1 1 0 1 0 2 0 0 0 3 2 1 0 1 0 0 0 14 0 1594.8104 B4DP15;B4DNI0;B0UZZ8;A8K806;O15213;A8K9A1 B4DP15 378 391 C6orf11;WDR46 WD repeat-containing protein 46 yes no 3 0.024296 17.917 1 0.87297 1.1698 NaN 1 Median NaN NaN NaN 0 0 Median 0.87297 1.1698 NaN 1 0 Median 9202700 6264800 2937900 0 0 0 9202700 6264800 2937900 198 372 216 328 539 539 0 ASPQGGQIAIAMR ______________________________ ______________________________ M A S M R L 3 1 0 0 0 2 0 2 0 2 0 0 1 0 1 1 0 0 0 0 0 0 13 0 1298.6765 Q9BSM1 Q9BSM1 2 14 PCGF1 Polycomb group RING finger protein 1 yes yes 2 6.3689E-05 84.753 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 199 915 217 329 540;541 540 211 1579 0 ASPSLERPEK ______________________________ ______________________________ M A S E K G 1 1 0 0 0 0 2 0 0 0 1 1 0 0 2 2 0 0 0 0 0 0 10 1 1112.5826 B4DMS5;Q13601 B4DMS5 2 11 KRR1 KRR1 small subunit processome component homolog yes no 2 2.3833E-50 137.55 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 200 483 218 330;331 542;543;544;545;546;547 543 700 0 ASPVTSPAAAFPTASPANK VSLEVPLTASVTSPKASPVTSPAAAFPTAS TSPAAAFPTASPANKDVSSFLETTADVEEI K A S N K D 6 0 1 0 0 0 0 0 0 0 0 1 0 1 4 3 2 0 0 1 0 0 19 0 1783.9105 J3QK86;J3KPG5;F8VU39;Q9UIF9;H0YHQ7 J3QK86 463 481 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A yes no 2 5.7545E-41 105.01 5 4 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 201 636 219;220 332;333;334;335;336;337;338;339;340 548;549;550;551;552;553;554;555;556 553 964;965;966;1933 0 ASPVTTSPTAATTQNPVLSK ______________________________ TSPTAATTQNPVLSKLLMADQDSPLDLTVR K A S S K L 3 0 1 0 0 1 0 0 0 0 1 1 0 0 3 3 5 0 0 2 0 0 20 0 1970.032 A0A1B0GUH9;A2VCT1;Q96JN0 A0A1B0GUH9 8 27 LCOR Ligand-dependent corepressor yes no 2 6.9745E-11 61.862 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 202 286 221;222 341;342 557;558 558 425;426;1829 0 ASSGDQGSPPCFLR ______________________________ KASSGDQGSPPCFLRFPRPVRVVSGAEAEL K A S L R F 1 1 0 1 1 1 0 2 0 0 1 0 0 1 2 3 0 0 0 0 0 0 14 0 1477.662 A0A024R468;A6NN50;O75147 A0A024R468 3 16 CHPF;OBSL1 Obscurin-like protein 1 yes no 2 0.0010455 56.482 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 203 60 223 343 559 559 66 0 ASSLEDLVLK GDTVSASPCSAPLARASSLEDLVLKEASTA APLARASSLEDLVLKEASTAVSTPEAPEPP R A S L K E 1 0 0 1 0 0 1 0 0 0 3 1 0 0 0 2 0 0 0 1 0 0 10 0 1073.5968 A0A024RCU1;B4E0N1;B4DM01;Q9NPK3;Q96BC0;O76046;Q15477 A0A024RCU1 254 263 SKIV2L;SKI2W Helicase SKI2W yes no 2 0.0027853 62.466 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 204 164 224 344 560;561 560 226 0 ASSLGEIDESSELR LDFDLEPEPPPAPPRASSLGEIDESSELRV RASSLGEIDESSELRVLDIPGQDSETVFDI R A S L R V 1 1 0 1 0 0 3 1 0 1 2 0 0 0 0 4 0 0 0 0 0 0 14 0 1491.7053 Q16513 Q16513 581 594 PKN2 Serine/threonine-protein kinase N2 yes yes 2 0.0073789 49.31 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 205 826 225 345 562 562 1365 0 ASSPPDRIDIFGR SRSKHTKSSKHNKKRASSPPDRIDIFGRTV KRASSPPDRIDIFGRTVSKRSSLDEKQKRE R A S G R T 1 2 0 2 0 0 0 1 0 2 0 0 0 1 2 2 0 0 0 0 0 0 13 1 1429.7314 B4E3J6;A0A024RDW4;Q9NWB6 B4E3J6 25 37 FLJ10154;ARGLU1 Arginine and glutamate-rich protein 1 yes no 2 0.023081 53.448 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 206 171 226 346;347 563;564;565 563 232 0 ASSSDSEDSSEEEEEVQGPPAK KLQANGPVAKKAKKKASSSDSEDSSEEEEE DSSEEEEEVQGPPAKKAAVPAKRVGLPPGK K A S A K K 2 0 0 2 0 1 6 1 0 0 0 1 0 0 2 6 0 0 0 1 0 0 22 0 2292.9354 B2RAU8;A0A0A0MRM9;Q14978;S4R3C2 B2RAU8 82 103 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 2.3019E-15 73.887 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 207 214 227 348 566 566 292;293 0 ASSSGPRSPLDQR SRDYRYHSDWQMDHRASSSGPRSPLDQRSP HRASSSGPRSPLDQRSPYGSRSPFEHSVEH R A S Q R S 1 2 0 1 0 1 0 1 0 0 1 0 0 0 2 4 0 0 0 0 0 0 13 1 1356.6746 O14646;B3KT33 O14646 1670 1682 CHD1 Chromodomain-helicase-DNA-binding protein 1 yes no 3 0.00056516 58.98 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 208 696 228 349 567;568 567 1026 0 ASTLVHKPQSDFTNDALSPK EPGTETPQVNLSDLKASTLVHKPQSDFTND HKPQSDFTNDALSPKFNLSSSISSENSLIK K A S P K F 2 0 1 2 0 1 0 0 1 0 2 2 0 1 2 3 2 0 0 1 0 0 20 1 2155.0909 B2RWP5;Q96L73;A4QPE5;Q96MN8;Q8NB95 B2RWP5 466 485 NSD1 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific yes no 3 2.6586E-24 101.76 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 209 422 229 350 569;570 569 621 0 ASVSITFDNSDKK LQDLVYKNGQAGITKASVSITFDNSDKKQS TKASVSITFDNSDKKQSPLGFEVHDEITVT K A S K K Q 1 0 1 2 0 0 0 0 0 1 0 2 0 1 0 3 1 0 0 1 0 0 13 1 1410.6991 B7ZLZ7;A0A024R158;O95347;A8K984;B3KMB1;Q2KQ72;Q05BV1;Q6IPS5;A0JLM9;Q32Q15;Q6P712 B7ZLZ7 77 89 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 yes no 2 0.017884 38.783 1 0.43733 0.5399 NaN 1 Median NaN NaN NaN 0 0 Median 0.43733 0.5399 NaN 1 0 Median 10077000 7508000 2569500 0 0 0 10077000 7508000 2569500 210 27 230 351 571;572 571 2 ATAGDTHLGGEDFDNR DVSILTIDDGIFEVKATAGDTHLGGEDFDN TAGDTHLGGEDFDNRLVNHFVEEFKRKHKK K A T N R L 2 1 1 3 0 0 1 3 1 0 1 0 0 1 0 0 2 0 0 0 0 0 16 0 1674.7234 B4DFN9;B4DI39;B4DWK5;A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;V9GZ37;B3KTT5;B4DVU9;B4E1S9;B4E388;B4DNT8;Q53FA3;B2RCQ9;B4DI54;P34931;B4DNV4;B4DXY3;Q9UQC1;B4DHP5;Q53FC7;B3KSM6;B2R6X5;P48741;P17066 B4DFN9 152 167 HEL-S-103;HSPA1B;HSPA1A;HSPA1L;HSP70-1;HSPA7;HSPA6 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1-like;Putative heat shock 70 kDa protein 7;Heat shock 70 kDa protein 6 no no 3 2.2636E-07 72.433 1 1 1.033 1.3573 57.616 2 Median 0.71498 0.90311 NaN 1 0 Median 1.4926 2.0399 NaN 1 0 Median 57008000 25327000 31681000 16177000 9351600 6825700 40830000 15975000 24855000 211 256;405 231 352;353 573;574;575;576 576 4 ATATHTDVLK RLAELLTQQHGLQCRATATHTDVLKDGFVF GLQCRATATHTDVLKDGFVFRIRVAYQREP R A T L K D 2 0 0 1 0 0 0 0 1 0 1 1 0 0 0 0 3 0 0 1 0 0 10 0 1055.5611 A0A0A0MRW6;B4DF80;Q9H6R4;B3KPN5 A0A0A0MRW6 779 788 NOL6 Nucleolar protein 6 yes no 2 0.0011331 88.136 1 0.73074 0.92226 NaN 1 Median NaN NaN NaN 0 0 Median 0.73074 0.92226 NaN 1 0 Median 10392000 6079000 4312600 0 0 0 10392000 6079000 4312600 212 215 232 354 577 577 1 ATDTSQGELVHPK ______________________________ ______________________________ M A T P K A 1 0 0 1 0 1 1 1 1 0 1 1 0 0 1 1 2 0 0 1 0 0 13 0 1381.6838 Q5SSJ5;X6RGJ2;B0QZK9;B0QZK8 Q5SSJ5 2 14 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 2 0.00011627 80.312 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 213 842 233 355 578;579 578 1390 0 ATGPPVSELITK KATKKAAGAGAAKRKATGPPVSELITKAVA KRKATGPPVSELITKAVAASKERNGLSLAA K A T T K A 1 0 0 0 0 0 1 1 0 1 1 1 0 0 2 1 2 0 0 1 0 0 12 0 1211.6762 P16401 P16401 38 49 HIST1H1B Histone H1.5 yes yes 2 0.00014541 88.706 2 3 0.51944 0.65344 14.559 3 Median 0.66683 0.83074 NaN 1 0 Median 0.5162 0.64607 1.604 2 0 Median 105900000 66565000 39338000 14462000 8356600 6105800 91440000 58208000 33232000 214 738 234;235 356;357;358;359;360 580;581;582;583;584;585;586;587;588;589;590 588 1149 7 ATIAGGGVIPHIHK QLAIRGDEELDSLIKATIAGGGVIPHIHKS KATIAGGGVIPHIHKSLIGKKGQQKTA___ K A T H K S 2 0 0 0 0 0 0 3 2 3 0 1 0 0 1 0 1 0 0 1 0 0 14 0 1369.783 Q71UI9;P0C0S5 Q71UI9 103 116 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z yes no 3 3.9109E-05 79.466 1 0.5633 0.70941 NaN 1 Median NaN NaN NaN 0 0 Median 0.5633 0.70941 NaN 1 0 Median 219790000 140630000 79153000 0 0 0 219790000 140630000 79153000 215 732 236 361 591;592 592 2 ATLSSTSGLDLMSESGEGEISPQREVSR SPFSSLSQDQAATSKATLSSTSGLDLMSES ESGEGEISPQREVSRSQDQFSDMRISINQT K A T S R S 1 2 0 1 0 1 4 3 0 1 3 0 1 0 1 7 2 0 0 1 0 0 28 1 2922.3877 E9PMS6;B7Z8W3;A0A1P7ZIM8;A0A0A0MTE2;E9PMT2;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMP7;H0Y424;H0YDG6 E9PMS6 571 598 LMO7 LIM domain only protein 7 yes no 3 2.0602E-24 62.666 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 216 227 237 362 593 593 46 315 0 ATNESEDEIPQLVPIGK EHGKKKRGRGKAQVKATNESEDEIPQLVPI NESEDEIPQLVPIGKKTPANEKVEIQKHAT K A T G K K 1 0 1 1 0 1 3 1 0 2 1 1 0 0 2 1 1 0 0 1 0 0 17 0 1838.9262 O76021;J3QSV6;A0PJ61;Q32Q62 O76021 357 373 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 2 7.6351E-19 89.484 1 4 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 217 712 238 363;364;365;366;367 594;595;596;597;598;599 598 1063;1946 0 ATNESEDEIPQLVPIGKK EHGKKKRGRGKAQVKATNESEDEIPQLVPI ESEDEIPQLVPIGKKTPANEKVEIQKHATG K A T K K T 1 0 1 1 0 1 3 1 0 2 1 2 0 0 2 1 1 0 0 1 0 0 18 1 1967.0211 O76021;J3QSV6;A0PJ61;Q32Q62 O76021 357 374 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 2 3.5989E-08 66.809 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 218 712 239 368 600 600 1063;1946 0 ATQQQHDFTLTQTADGR EGSLSARWPVAGQIRATQQQHDFTLTQTAD QQQHDFTLTQTADGRSSFDWLTGSSTDPLV R A T G R S 2 1 0 2 0 4 0 1 1 0 1 0 0 1 0 0 4 0 0 0 0 0 17 0 1916.8977 P78527 P78527 2637 2653 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 3 5.2846E-05 42.633 1 1 0.61567 0.80459 NaN 1 Median NaN NaN NaN 0 0 Median 0.61567 0.80459 NaN 1 0 Median 15889000 10457000 5432100 3258400 3258400 0 12630000 7198200 5432100 219 795 240 369;370 601;602 602 2 ATSSSNPSSPAPDWYK TGNNPSVSLKLEESKATSSSNPSSPAPDWY TSSSNPSSPAPDWYKDFVTDADAEVLEHSG K A T Y K D 2 0 1 1 0 0 0 0 0 0 0 1 0 0 3 5 1 1 1 0 0 0 16 0 1693.7584 A4LAA3;P46100;B4DLE1;B4DHH8 A4LAA3 1988 2003 ATRX Transcriptional regulator ATRX yes no 2 0.00024933 54.812 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 220 317 241;242 371;372 603;604 603 467;468;1838 0 AVAFHPR TKPYRMLRHHKKALRAVAFHPRYPLFASGS RHHKKALRAVAFHPRYPLFASGSDDGSVIV R A V P R Y 2 1 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 1 0 0 7 0 796.43441 B2RDN4;A8K3R2;Q14137;B4DEN9;Q6DKJ9;Q4G0D9 B2RDN4 668 674 BOP1 Ribosome biogenesis protein BOP1 yes no 2 5.8063E-07 105.42 1 0.58152 0.75107 NaN 1 Median NaN NaN NaN 0 0 Median 0.58152 0.75107 NaN 1 0 Median 20476000 11931000 8545200 0 0 0 20476000 11931000 8545200 221 349 243 373 605 605 1 AVAILCNHQR ENIPAKILSYNRANRAVAILCNHQRAPPKT NRANRAVAILCNHQRAPPKTFEKSMMNLQT R A V Q R A 2 1 1 0 1 1 0 0 1 1 1 0 0 0 0 0 0 0 0 1 0 0 10 0 1180.6135 P11387;B9EG90;Q9BVT2 P11387 625 634 TOP1 DNA topoisomerase 1 yes no 2;3 0.0061079 67.981 2 0.67765 0.88749 1.6426 2 Median NaN NaN NaN 0 0 Median 0.67765 0.88749 1.6426 2 0 Median 26461000 15336000 11125000 0 0 0 26461000 15336000 11125000 222 733 244 374;375 606;607 606 2 AVAVESIHR LLVKFLDADKPQWLRAVAVESIHRFCVQPQ KPQWLRAVAVESIHRFCVQPQLLRSFCQSY R A V H R F 2 1 0 0 0 0 1 0 1 1 0 0 0 0 0 1 0 0 0 2 0 0 9 0 980.54033 Q6P148;B3KW06;F8VZV1;B7ZM73;Q7Z3U7 Q6P148 353 361 MON2 Protein MON2 homolog yes no 2 0.0040935 49.418 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 223 449 245 376 608 608 655 0 AVDPEDDFQR IGGSEAPAPQNKDQKAVDPEDDFQREMSFY NKDQKAVDPEDDFQREMSFYRQAQAAVLAV K A V Q R E 1 1 0 3 0 1 1 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 10 0 1190.5204 Q6IB29;H7C2Q8;Q99848;B4DHA6 Q6IB29 95 104 EBNA1BP2 Probable rRNA-processing protein EBP2 yes no 2 0.017528 45.161 1 0.74415 0.98585 NaN 1 Median NaN NaN NaN 0 0 Median 0.74415 0.98585 NaN 1 0 Median 6324900 3173200 3151800 0 0 0 6324900 3173200 3151800 224 674 246 377 609 609 1 AVIGIGIEEEDRK CDRAGSVATCQAVMRAVIGIGIEEEDRKHT MRAVIGIGIEEEDRKHTWMEDADSCVAHNA R A V R K H 1 1 0 1 0 0 3 2 0 3 0 1 0 0 0 0 0 0 0 1 0 0 13 1 1427.762 O94906 O94906 528 540 PRPF6 Pre-mRNA-processing factor 6 yes yes 3 0.0052197 27.967 1 0.90414 1.1426 NaN 1 Median NaN NaN NaN 0 0 Median 0.90414 1.1426 NaN 1 0 Median 5145300 3045600 2099700 0 0 0 5145300 3045600 2099700 225 714 247 378 610 610 1 AVKDELLGEKPEVK YFKKHEKRMSKDEERAVKDELLGEKPEVKQ RAVKDELLGEKPEVKQKWASRLLAKLRKDI R A V V K Q 1 0 0 1 0 0 3 1 0 0 2 3 0 0 1 0 0 0 0 2 0 0 14 2 1553.8665 Q6FI30;P08651;B7Z4T6 Q6FI30 47 60 NFIC Nuclear factor 1;Nuclear factor 1 C-type yes no 3 0.00045269 58.817 1 0.96606 1.3951 NaN 1 Median NaN NaN NaN 0 0 Median 0.96606 1.3951 NaN 1 0 Median 13713000 6957800 6755200 0 0 0 13713000 6957800 6755200 226 730 248 379 611 611 1 AVKDELLSEKPEVK ______________________________ RAVKDELLSEKPEVKQKWASRLLAKLRKDI R A V V K Q 1 0 0 1 0 0 3 0 0 0 2 3 0 0 1 1 0 0 0 2 0 0 14 2 1583.877 S4R3K4;B1AKN6;B1AKN7;B1AKN5;B4DRN9;B1AKN8;Q12857 S4R3K4 8 21 NFIA Nuclear factor 1;Nuclear factor 1 A-type yes no 3 0.0085234 26.929 1 0.67388 0.97313 NaN 1 Median NaN NaN NaN 0 0 Median 0.67388 0.97313 NaN 1 0 Median 12883000 7139800 5743100 0 0 0 12883000 7139800 5743100 227 392 249 380 612 612 1 AVPPVSPELR ELRKTAPTLSPEHWKAVPPVSPELRKPGPP PEHWKAVPPVSPELRKPGPPLSPEIRSPAG K A V L R K 1 1 0 0 0 0 1 0 0 0 1 0 0 0 3 1 0 0 0 2 0 0 10 0 1063.6026 Q96JM3 Q96JM3 411 420 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.0031758 55.401 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 228 906 250 381 613;614 614 1547 0 AVPVESPVQKV LRVYARGRLKQRGKKAVPVESPVQKV____ RGKKAVPVESPVQKV_______________ K A V K V - 1 0 0 0 0 1 1 0 0 0 0 1 0 0 2 1 0 0 0 4 0 0 11 1 1151.655 B3KVY9;Q8TB61 B3KVY9 402 412 SLC35B2 Adenosine 3-phospho 5-phosphosulfate transporter 1 yes no 2 0.0022832 53.237 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 229 448 251 382 615 615 654 0 AVSTVVVTTAPSPK PASHLQQGTASGSSKAVSTVVVTTAPSPKQ KAVSTVVVTTAPSPKQAPEQQ_________ K A V P K Q 2 0 0 0 0 0 0 0 0 0 0 1 0 0 2 2 3 0 0 4 0 0 14 0 1355.766 A0A024R3K9;A0A024R3N2;Q6P4R8 A0A024R3K9 1280 1293 NFRKB Nuclear factor related to kappa-B-binding protein yes no 2 1.0733E-22 114.64 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 230 53 252 383;384 616;617;618;619;620;621 616 54 0 AVTETSFNSVNVNGQR NVHSANVSKVSFNEKAVTETSFNSVNVNGQ VTETSFNSVNVNGQRGENSKLSLTPNCSST K A V Q R G 1 1 3 0 0 1 1 1 0 0 0 0 0 1 0 2 2 0 0 3 0 0 16 0 1721.8333 B3KWI2;Q8IZT6 B3KWI2 275 290 ASPM Abnormal spindle-like microcephaly-associated protein yes no 2 1.2863E-35 124.51 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 231 450 253 385 622;623 622 656 0 AVTIANSPSKPSEK HNSKEKIAKMEHGPKAVTIANSPSKPSEKD KAVTIANSPSKPSEKDSVVSLESQKTPADP K A V E K D 2 0 1 0 0 0 1 0 0 1 0 2 0 0 2 3 1 0 0 1 0 0 14 1 1427.762 Q8NEF9 Q8NEF9 197 210 SRFBP1 Serum response factor-binding protein 1 yes yes 2;3 0.00021365 68.944 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 232 888 254 386;387 624;625 624 1493 0 AVVGVVAGGGR KLPSGSKKVISSANRAVVGVVAGGGRIDKP SANRAVVGVVAGGGRIDKPILKAGRAYHKY R A V G R I 2 1 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 11 0 940.54541 E9PKZ0;P62917;E9PKU4;E9PP36 E9PKZ0 164 174 RPL8 60S ribosomal protein L8 yes no 2 0.014331 45.68 1 0.43725 0.57766 NaN 1 Median NaN NaN NaN 0 0 Median 0.43725 0.57766 NaN 1 0 Median 6071400 4198800 1872600 0 0 0 6071400 4198800 1872600 233 624 255 388 626 626 1 AVVLPGGTATSPK NASTAMLMAASVARKAVVLPGGTATSPKMI RKAVVLPGGTATSPKMIAKNVLGLVPQALP K A V P K M 2 0 0 0 0 0 0 2 0 0 1 1 0 0 2 1 2 0 0 2 0 0 13 0 1196.6765 Q8N1G0;F8WCX2;H0Y5I5 Q8N1G0 423 435 ZNF687 Zinc finger protein 687 yes no 2 3.7245E-09 92.925 1 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 234 879 256 389;390;391 627;628;629;630;631 631 1475;2018;2019 0 AYDIAGSTK MQSLDKDIVALMVRRAYDIAGSTKDVKVFL ALMVRRAYDIAGSTKDVKVFLNGNKLPVKG R A Y T K D 2 0 0 1 0 0 0 1 0 1 0 1 0 0 0 1 1 0 1 0 0 0 9 0 924.45526 P11388 P11388 243 251 TOP2A DNA topoisomerase 2-alpha yes yes 2 0.010489 54.982 1 0.84708 1.0646 NaN 1 Median NaN NaN NaN 0 0 Median 0.84708 1.0646 NaN 1 0 Median 8707600 4558300 4149200 0 0 0 8707600 4558300 4149200 235 734 257 392 632 632 1 AYHEQLSVAEITNACFEPANQMVK HFPLATYAPVISAEKAYHEQLSVAEITNAC EITNACFEPANQMVKCDPRHGKYMACCLLY K A Y V K C 4 0 2 0 1 2 3 0 1 1 1 1 1 1 1 1 1 0 1 2 0 0 24 0 2749.284 B3KT06;B3KPS3;Q1ZYQ1;A8JZY9;Q13748;Q71U36;P68363;C9JDS9;B4DDU2;Q9UQM3;B4DQK4;P68366;Q6PEY2 B3KT06 246 269 TUBA2;TUBA3C;TUBA1A;TUBA1B;TUBA4A;TUBA3E Tubulin alpha-3C/D chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-3E chain yes no 3 2.5762E-24 88.239 1 3.5983 4.5198 NaN 1 Median NaN NaN NaN 0 0 Median 3.5983 4.5198 NaN 1 0 Median 47907000 9574100 38333000 0 0 0 47907000 9574100 38333000 236 334 258 393 633 633 69 1 AYPLADAHLTK ______________________________ VNPKAYPLADAHLTKKLLDLVQQSCNYKQL K A Y T K K 3 0 0 1 0 0 0 0 1 0 2 1 0 0 1 0 1 0 1 0 0 0 11 0 1198.6346 Q6FHM6;B1AHD1;P55769 Q6FHM6 10 20 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed yes no 2 0.010427 60.102 1 0.47192 0.59121 NaN 1 Median NaN NaN NaN 0 0 Median 0.47192 0.59121 NaN 1 0 Median 41759000 27666000 14093000 0 0 0 41759000 27666000 14093000 237 390 259 394 634;635 635 2 AYPLADAHLTKK ______________________________ NPKAYPLADAHLTKKLLDLVQQSCNYKQLR K A Y K K L 3 0 0 1 0 0 0 0 1 0 2 2 0 0 1 0 1 0 1 0 0 0 12 1 1326.7296 Q6FHM6;B1AHD1;P55769 Q6FHM6 10 21 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed yes no 3 0.021907 18.413 1 0.41546 0.5201 NaN 1 Median NaN NaN NaN 0 0 Median 0.41546 0.5201 NaN 1 0 Median 14084000 8918800 5165400 0 0 0 14084000 8918800 5165400 238 390 260 395 636 636 1 AYQDTTLNSSSEYCVEK LHPEGDHFTLISIYKAYQDTTLNSSSEYCV QDTTLNSSSEYCVEKWCRDYFLNCSALRMA K A Y E K W 1 0 1 1 1 1 2 0 0 0 1 1 0 0 0 3 2 0 2 1 0 0 17 0 1993.8575 X6R717;B2RD71;Q7L7V1 X6R717 177 193 DHX32 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 yes no 2 1.3687E-60 137.81 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 239 414 261 396 637 637 612 0 AYSPTCSPTLGFK PLAHPPTVFDAGLQKAYSPTCSPTLGFKEE QKAYSPTCSPTLGFKEELRPPPTKLAACEP K A Y F K E 1 0 0 0 1 0 0 1 0 0 1 1 0 1 2 2 2 0 1 0 0 0 13 0 1427.6755 Q5TGY3 Q5TGY3 1397 1409 AHDC1 AT-hook DNA-binding motif-containing protein 1 yes yes 2 6.8884E-05 86.291 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 240 850 262 397 638;639;640 639 1400;1401 0 AYVEIEYEQETEPVAK HKGKMPLRGPLQRKRAYVEIEYEQETEPVA YVEIEYEQETEPVAKAKTT___________ R A Y A K A 2 0 0 0 0 1 5 0 0 1 0 1 0 0 1 0 1 0 2 2 0 0 16 0 1896.8993 Q9BXY0 Q9BXY0 281 296 MAK16 Protein MAK16 homolog yes yes 2 1.7464E-06 73.632 1 0.40861 0.51213 NaN 1 Median NaN NaN NaN 0 0 Median 0.40861 0.51213 NaN 1 0 Median 10072000 6853600 3217900 0 0 0 10072000 6853600 3217900 241 921 263 398 641 641 1 CDILVQEELLASPK ELGDELQIDAIDDQKCDILVQEELLASPKK KCDILVQEELLASPKKLLEDTLFPSSKKLK K C D P K K 1 0 0 1 1 1 2 0 0 1 3 1 0 0 1 1 0 0 0 1 0 0 14 0 1613.8335 Q96JM3 Q96JM3 592 605 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.0057401 41.621 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 242 906 264 399 642 642 1548 0 CGSGPVHISGQHLVAVEEDAESEDEEEEDVK LGGFEITPPVVLRLKCGSGPVHISGQHLVA EEDAESEDEEEEDVKLLSISGKRSAPGGGS K C G V K L 2 0 0 3 1 1 8 3 2 1 1 1 0 0 1 3 0 0 0 4 0 0 31 0 3379.4634 A0A140VJQ2;A0A0S2Z4G7;A4ZU86;A0A0S2Z491;P06748;Q9NX34;Q9BTI9;E5RI98 A0A140VJQ2 104 134 NPM1 Nucleophosmin yes no 3;4 1.7024E-81 135.27 4 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1771500 1771500 0 1771500 1771500 0 0 0 0 243 263 265;266 400;401;402;403 643;644;645;646;647;648;649 644 358 1 CLVAGLLSPR SGPSLNELIPDGYNRCLVAGLLSPRFVDVQ DGYNRCLVAGLLSPRFVDVQPSSLSQEEQL R C L P R F 1 1 0 0 1 0 0 1 0 0 3 0 0 0 1 1 0 0 0 1 0 0 10 0 1084.6063 Q8WYP5 Q8WYP5 521 530 AHCTF1 Protein ELYS yes yes 2 0.0020486 64.439 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 244 897 267 404 650;651 651 1518 0 CPEILSDESSSDEDEKK ERNSSGMARKAKRTKCPEILSDESSSDEDE EILSDESSSDEDEKKNKEESSDDEDKESEE K C P K K N 0 0 0 3 1 0 4 0 0 1 1 2 0 0 1 4 0 0 0 0 0 0 17 1 1966.8313 P35659;B4DFG0;B4DNW3;H0Y8X0 P35659 222 238 DEK Protein DEK yes no 2 2.3568E-07 65.842 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 245 754 268 405 652 652 1174;1175;1176 0 CSASPPLRR VFFSAQNAAKQPSDKCSASPPLRRQCIREN KQPSDKCSASPPLRRQCIRENGNVAKTPRN K C S R R Q 1 2 0 0 1 0 0 0 0 0 1 0 0 0 2 2 0 0 0 0 0 0 9 1 1042.5342 P46013;Q70L73 P46013 824 832 MKI67 Antigen KI-67 no no 2;3 7.666E-05 90.15 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 246 762;865 269 406;407 653;654;655;656;657 657 1204 0 CSLSEPLESDEADLAK AEGSGGIVGHDEISRCSLSEPLESDEADLA SLSEPLESDEADLAKKKNLDCSRSTRSSKN R C S A K K 2 0 0 2 1 0 3 0 0 0 3 1 0 0 1 3 0 0 0 0 0 0 16 0 1762.7931 Q03188;H0Y8J2 Q03188 612 627 CENPC Centromere protein C yes no 2 9.1639E-07 76.82 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 247 799 270 408 658 658 1302 0 DADLSPVNASIIK MKQEAELMSREDVTKDADLSPVNASIIKEN TKDADLSPVNASIIKENYEKDEDFLSSTRN K D A I K E 2 0 1 2 0 0 0 0 0 2 1 1 0 0 1 2 0 0 0 1 0 0 13 0 1341.714 F5H1U9;O75970 F5H1U9 479 491 MPDZ Multiple PDZ domain protein yes no 2 2.9851E-14 86.467 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 248 633 271 409 659 659 960 0 DADSSISVLEIHSQK MKTGELEKETAPLRKDADSSISVLEIHSQK DADSSISVLEIHSQKAQIEEPDPPEMETSL K D A Q K A 1 0 0 2 0 1 1 0 1 2 1 1 0 0 0 4 0 0 0 1 0 0 15 0 1627.8053 Q96T23;H0YER1;H0YCN2 Q96T23 512 526 RSF1 Remodeling and spacing factor 1 yes no 2 1.6927E-06 87.216 1 0.74471 0.94924 NaN 1 Median NaN NaN NaN 0 0 Median 0.74471 0.94924 NaN 1 0 Median 18271000 10385000 7885100 0 0 0 18271000 10385000 7885100 249 910 272 410 660;661;662 662 3 DAEAWFNEK NMRSQYEQLAEQNRKDAEAWFNEKSKELTT AEQNRKDAEAWFNEKSKELTTEIDNNIEQI K D A E K S 2 0 1 1 0 0 2 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 9 0 1108.4825 CON__P13645;P13645;CON__Q7Z3Z0;CON__Q7Z3Y8;CON__Q148H6;CON__Q7Z3Y7;Q7Z3Z0;Q7Z3Y8;Q7Z3Y7 CON__P13645 335 343 KRT10;KRT25;KRT27;KRT28 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 25;Keratin, type I cytoskeletal 27;Keratin, type I cytoskeletal 28 yes no 2 7.9045E-06 76.827 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 11959000 11959000 0 0 0 0 11959000 11959000 0 + 250 579 273 411 663 663 1 DAEFYEHR KFVLAHGGRRVAILRDAEFYEHRKEERCSR RRVAILRDAEFYEHRKEERCSRVWGTTCTK R D A H R K 1 1 0 1 0 0 2 0 1 0 0 0 0 1 0 0 0 0 1 0 0 0 8 0 1065.4516 Q5TB52;B4DWB5;O95340 Q5TB52 330 337 PAPSS2 Bifunctional 3-phosphoadenosine 5-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes no 2 0.0049772 63.565 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3226300 0 3226300 0 0 0 3226300 0 3226300 251 505 274 412 664 664 1 DAEYIYPSLESDDDDPALK NASLDEQDSLGACFKDAEYIYPSLESDDDD IYPSLESDDDDPALKSRPKKKKNSDDAPWS K D A L K S 2 0 0 5 0 0 2 0 0 1 2 1 0 0 2 2 0 0 2 0 0 0 19 0 2154.9481 Q9UPP1;H0Y589;H0Y3N9 Q9UPP1 847 865 PHF8 Histone lysine demethylase PHF8 yes no 2 3.1493E-05 43.261 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 252 960 275 413;414 665;666 665 1722;1723 0 DAGEGGLSLAIEGPSK HGVVNKPATFTVNTKDAGEGGLSLAIEGPS AGEGGLSLAIEGPSKAEISCTDNQDGTCSV K D A S K A 2 0 0 1 0 0 2 4 0 1 2 1 0 0 1 2 0 0 0 0 0 0 16 0 1499.7468 Q5HY54;Q60FE6;Q60FE5;P21333;A6NDY9;A0A087WWY3;B4DTD5;Q96C61;Q6NXF2;Q8TES4 Q5HY54 1852 1867 FLNA;FLJ00119 Filamin-A yes no 2 0.00026427 60.161 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1599300 638870 960390 1599300 638870 960390 0 0 0 253 746 276 415 667 667 1 DAHLLVESK IRNLLESYHVPELIKDAHLLVESKNLDFQK VPELIKDAHLLVESKNLDFQKTVQLTSSEL K D A S K N 1 0 0 1 0 0 1 0 1 0 2 1 0 0 0 1 0 0 0 1 0 0 9 0 1010.5397 B4DSR0;E5KNY5;P42704 B4DSR0 541 549 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 2 1.3559E-09 83.647 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 254 495 277 416 668 668 1 DAPSLEEVEGHVADGSATEMGTTK AVHADVYRVLGGLGKDAPSLEEVEGHVADG GHVADGSATEMGTTKKAVKPKKKHLHRTIE K D A T K K 3 0 0 2 0 0 4 3 1 0 1 1 1 0 1 2 3 0 0 2 0 0 24 0 2430.0857 B4DRG7;E9PHA2;A8K4T8;Q15003;C9J470 B4DRG7 162 185 NCAPH Condensin complex subunit 2 yes no 3 3.3614E-13 52.268 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 255 354 278;279 417;418 669;670 669 72 538;1851 0 DAPSLEEVEGHVADGSATEMGTTKK AVHADVYRVLGGLGKDAPSLEEVEGHVADG HVADGSATEMGTTKKAVKPKKKHLHRTIEQ K D A K K A 3 0 0 2 0 0 4 3 1 0 1 2 1 0 1 2 3 0 0 2 0 0 25 1 2558.1806 B4DRG7;E9PHA2;A8K4T8;Q15003;C9J470 B4DRG7 162 186 NCAPH Condensin complex subunit 2 yes no 3 1.1817E-38 107.13 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 256 354 280 419 671;672 672 72 538;1851 0 DAQRLSPIPEEVPK CLEKLEKSKKTFLDKDAQRLSPIPEEVPKS KDAQRLSPIPEEVPKSTLESEKPGSPEAAE K D A P K S 1 1 0 1 0 1 2 0 0 1 1 1 0 0 3 1 0 0 0 1 0 0 14 1 1577.8413 Q96T23;H0YER1;H0YCN2 Q96T23 599 612 RSF1 Remodeling and spacing factor 1 yes no 2;3 2.7577E-05 81.723 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 257 910 281 420;421;422;423 673;674;675;676;677;678;679 678 1563 0 DASGDGELDLSGIDDLEIDR DSIRECISSQSSDPKDASGDGELDLSGIDD GELDLSGIDDLEIDRYILNESEARVKAELW K D A D R Y 1 1 0 6 0 0 2 3 0 2 3 0 0 0 0 2 0 0 0 0 0 0 20 0 2103.9444 A0A024R6P8;Q92994 A0A024R6P8 236 255 BRF1 Transcription factor IIIB 90 kDa subunit yes no 2 2.2803E-06 41.621 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 258 84 282 424 680 680 116 0 DASLVTNEDHQR LHAEYESLRDLLKSKDASLVTNEDHQRSLL KSKDASLVTNEDHQRSLLAFDQQPAMHHSF K D A Q R S 1 1 1 2 0 1 1 0 1 0 1 0 0 0 0 1 1 0 0 1 0 0 12 0 1383.6379 P49454 P49454 771 782 CENPF Centromere protein F yes yes 2 0.016642 40.477 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 259 768 283 425 681 681 1236 0 DAVTYTEHAK ETRGVLKVFLENVIRDAVTYTEHAKRKTVT ENVIRDAVTYTEHAKRKTVTAMDVVYALKR R D A A K R 2 0 0 1 0 0 1 0 1 0 0 1 0 0 0 0 2 0 1 1 0 0 10 0 1133.5353 B2R4R0;P62805;Q0VAS5 B2R4R0 69 78 HIST1H4H;HIST1H4A Histone H4 yes no 2;3 5.8675E-79 152.47 8 16 0.57213 0.75415 14.491 15 Median 0.74639 0.87666 12.545 6 0 Median 0.56926 0.71486 12.398 9 0 Median 3994200000 2504000000 1490200000 683700000 392600000 291100000 3310500000 2111400000 1199100000 260 400 284 426;427;428;429;430;431;432;433;434;435;436;437;438;439;440;441;442;443;444;445;446;447;448;449 682;683;684;685;686;687;688;689;690;691;692;693;694;695;696;697;698;699;700;701;702;703;704;705;706;707;708;709;710;711;712;713;714;715;716;717;718;719;720;721;722;723;724;725;726;727;728;729;730;731;732;733;734;735;736;737 684 56 DAVTYTEHAKR ETRGVLKVFLENVIRDAVTYTEHAKRKTVT NVIRDAVTYTEHAKRKTVTAMDVVYALKRQ R D A K R K 2 1 0 1 0 0 1 0 1 0 0 1 0 0 0 0 2 0 1 1 0 0 11 1 1289.6364 B2R4R0;P62805 B2R4R0 69 79 HIST1H4H;HIST1H4A Histone H4 yes no 3 0.00097953 62.466 1 2 0.67934 0.92843 12.729 2 Median 0.78008 1.0159 NaN 1 0 Median 0.59161 0.84852 NaN 1 0 Median 66102000 42891000 23211000 37703000 21548000 16155000 28399000 21343000 7056200 261 400 285 450;451;452 738;739;740;741 740 4 DAVTYTEHAKRK ETRGVLKVFLENVIRDAVTYTEHAKRKTVT VIRDAVTYTEHAKRKTVTAMDVVYALKRQG R D A R K T 2 1 0 1 0 0 1 0 1 0 0 2 0 0 0 0 2 0 1 1 0 0 12 2 1417.7314 B2R4R0;P62805 B2R4R0 69 80 HIST1H4H;HIST1H4A Histone H4 yes no 3 0.0021281 48.568 1 0.58124 0.70016 NaN 1 Median 0.58124 0.70016 NaN 1 0 Median NaN NaN NaN 0 0 Median 3195700 1617700 1578000 3195700 1617700 1578000 0 0 0 262 400 286 453 742 742 1 DCFGCLR EWLKDTCGANAKQSRDCFGCLREWCDAFL_ GANAKQSRDCFGCLREWCDAFL________ R D C L R E 0 1 0 1 2 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 7 0 926.37386 B2R4V4;A0A024R5H0;O75531 B2R4V4 76 82 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed yes no 2 0.023664 85.306 1 0.9327 1.1977 NaN 1 Median 0.9327 1.1977 NaN 1 0 Median NaN NaN NaN 0 0 Median 8286900 4205400 4081500 8286900 4205400 4081500 0 0 0 263 69 287 454 743 743 1 DCSYGAVTSPTSTLESR PCSTLPPISTNATAKDCSYGAVTSPTSTLE SYGAVTSPTSTLESRDSGIIATLTSYSENV K D C S R D 1 1 0 1 1 0 1 1 0 0 1 0 0 0 1 4 3 0 1 1 0 0 17 0 1829.8102 Q9HCD6;D3DU10;J3KRP9 Q9HCD6 161 177 TANC2;hCG_1810810 Protein TANC2 yes no 2 0.0021804 45.723 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 264 931 288 455 744 744 1630;2042 0 DDAQSVETLGKPK QKNTSNKNKLEDELKDDAQSVETLGKPKAK LKDDAQSVETLGKPKAKRIRTSKTKQASKN K D D P K A 1 0 0 2 0 1 1 1 0 0 1 2 0 0 1 1 1 0 0 1 0 0 13 1 1386.6991 Q8WYP5;B3KRD0 Q8WYP5 2177 2189 AHCTF1 Protein ELYS yes no 2 0.00074272 80.014 1 0.57385 0.7161 NaN 1 Median NaN NaN NaN 0 0 Median 0.57385 0.7161 NaN 1 0 Median 16722000 10516000 6206600 0 0 0 16722000 10516000 6206600 265 897 289 456 745;746 746 2 DDEVQVVR ELRQKYNVRSMPIRKDDEVQVVRGHYKGQQ RSMPIRKDDEVQVVRGHYKGQQIGKVVQVY K D D V R G 0 1 0 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 8 0 958.47197 Q6IBH6;P61254;J3KTJ8;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;A0A024RBF6;Q9UNX3;E5RIT6 Q6IBH6 52 59 RPL26;hCG_26523;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 no no 2 0.012014 60.76 1 0.3894 0.50273 NaN 1 Median NaN NaN NaN 0 0 Median 0.3894 0.50273 NaN 1 0 Median 20332000 14689000 5643800 0 0 0 20332000 14689000 5643800 266 782;959 290 457 747 747 1 DDGSSMSFYVRPSPAK KDPNGPTHSSTLFVRDDGSSMSFYVRPSPA DGSSMSFYVRPSPAKRRLSTLILHGGGTVC R D D A K R 1 1 0 2 0 0 0 1 0 0 0 1 1 1 2 4 0 0 1 1 0 0 16 1 1742.7934 Q9NYB0 Q9NYB0 24 39 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 yes yes 2 7.6803E-07 75.97 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 267 946 291 458 748 748 223 1681 0 DDGVFVQEVTQNSPAAR NWQGSGSHGLTIAQRDDGVFVQEVTQNSPA GVFVQEVTQNSPAARTGVVKEGDQIVGATI R D D A R T 2 1 1 2 0 2 1 1 0 0 0 0 0 1 1 1 1 0 0 3 0 0 17 0 1831.8701 Q09666;B4DTV0;E9PQE3;E9PJZ0;E9PKR9;E9PJC6;E9PLK4;Q96EC4;Q9BVU3 Q09666 29 45 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 2 7.2585E-254 190.46 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 268 804 292 459;460 749;750;751;752;753;754 754 1314 0 DDLGNTLEK VEAIINPTNADIDLKDDLGNTLEKKGGKEF ADIDLKDDLGNTLEKKGGKEFVEAVLELRK K D D E K K 0 0 1 2 0 0 1 1 0 0 2 1 0 0 0 0 1 0 0 0 0 0 9 0 1003.4822 O75367;Q59FH0 O75367 227 235 H2AFY Core histone macro-H2A.1 yes no 2 0.001085 80.165 1 0.7846 0.99106 NaN 1 Median NaN NaN NaN 0 0 Median 0.7846 0.99106 NaN 1 0 Median 10430000 5511800 4918000 0 0 0 10430000 5511800 4918000 269 709 293 461 755;756 755 2 DDSLDLSPQGR HAAADLGSPSLQHSRDDSLDLSPQGRLSDV QHSRDDSLDLSPQGRLSDVLKRKRLPKRGP R D D G R L 0 1 0 3 0 1 0 1 0 0 2 0 0 0 1 2 0 0 0 0 0 0 11 0 1201.5575 Q14669 Q14669 985 995 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes yes 2 1.2921E-13 110.31 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 270 814 294 462 757;758;759 758 1334 0 DDVAPESGDTTVK KKRQQARKTASVLSKDDVAPESGDTTVKKP SKDDVAPESGDTTVKKPESKKEQTPEHGKK K D D V K K 1 0 0 3 0 0 1 1 0 0 0 1 0 0 1 1 2 0 0 2 0 0 13 0 1332.6045 O76021;J3QSV6;A0PJ61;Q32Q62 O76021 319 331 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 2 0.024934 34.773 1 0.35855 0.45152 NaN 1 Median NaN NaN NaN 0 0 Median 0.35855 0.45152 NaN 1 0 Median 8521400 6200900 2320500 0 0 0 8521400 6200900 2320500 271 712 295 463 760 760 1 DEALSDGDDLRDFPSDLK VAKVTVKSENLKVIKDEALSDGDDLRDFPS LSDGDDLRDFPSDLKKAHHLKRGATMNEDS K D E L K K 1 1 0 6 0 0 1 1 0 0 3 1 0 1 1 2 0 0 0 0 0 0 18 1 2006.9069 X5DRB1;D9I4E1;A8K146;A0A024R2M8;Q01831;D2CPK1;E7EUB5;D2CPI9;D2CPJ0;D2CPJ8 X5DRB1 90 107 XPC DNA repair protein complementing XP-C cells yes no 2 0.00061092 40.844 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 272 48 296 464 761 761 47 0 DEALSDGDDLRDFPSDLKK VAKVTVKSENLKVIKDEALSDGDDLRDFPS SDGDDLRDFPSDLKKAHHLKRGATMNEDSN K D E K K A 1 1 0 6 0 0 1 1 0 0 3 2 0 1 1 2 0 0 0 0 0 0 19 2 2135.0019 X5DRB1;D9I4E1;A8K146;A0A024R2M8;Q01831;D2CPK1;E7EUB5;D2CPI9;D2CPJ0;D2CPJ8 X5DRB1 90 108 XPC DNA repair protein complementing XP-C cells yes no 3 9.1629E-06 44.105 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 273 48 297 465 762 762 47 0 DEDISLTLNMNEEEVEK QGQTRYHFLILLFSKDEDISLTLNMNEEEV DISLTLNMNEEEVEKRFEGRLTKNMSGSLY K D E E K R 0 0 2 2 0 0 5 0 0 1 2 1 1 0 0 1 1 0 0 1 0 0 17 0 2006.899 A0A024R4Z6;Q08945 A0A024R4Z6 280 296 SSRP1 FACT complex subunit SSRP1 yes no 2 7.1036E-05 51.875 1 1 0.79037 0.97795 NaN 1 Median NaN NaN NaN 0 0 Median 0.79037 0.97795 NaN 1 0 Median 27950000 16138000 11811000 1643800 1643800 0 26306000 14495000 11811000 274 65 298 466;467 763;764;765 764 12 3 DEDLFREWLK DKAYVVLGQFLVLKKDEDLFREWLKDTCGA LVLKKDEDLFREWLKDTCGANAKQSRDCFG K D E L K D 0 1 0 2 0 0 2 0 0 0 2 1 0 1 0 0 0 1 0 0 0 0 10 1 1349.6616 B2R4V4;A0A024R5H0;O75531 B2R4V4 55 64 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed yes no 2 3.1535E-28 126.39 1 0.51309 0.70328 NaN 1 Median NaN NaN NaN 0 0 Median 0.51309 0.70328 NaN 1 0 Median 12534000 8227500 4306700 0 0 0 12534000 8227500 4306700 275 69 299 468 766 766 1 DEIENSIVHR LIRRRRTRIGYSFKKDEIENSIVHRVQGVF YSFKKDEIENSIVHRVQGVFQRASAKWKDD K D E H R V 0 1 1 1 0 0 2 0 1 2 0 0 0 0 0 1 0 0 0 1 0 0 10 0 1210.5942 B4DSL9;B3KQ21;Q9NYH9;B7Z9G4 B4DSL9 82 91 UTP6 U3 small nucleolar RNA-associated protein 6 homolog yes no 2 0.0059854 63.216 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3955600 3955600 0 0 0 0 3955600 3955600 0 276 438 300 469 767 767 1 DEILPTTPISEQK PKKPLPDHVSIVEPKDEILPTTPISEQKGG PKDEILPTTPISEQKGGKPEPPAMPQPVPT K D E Q K G 0 0 0 1 0 1 2 0 0 2 1 1 0 0 2 1 2 0 0 0 0 0 13 0 1469.7613 E9PPU1;H0YEU2;E9PL09;Q53G83;P23396;E9PSF4;Q9NQS8 E9PPU1 130 142 RPS3 40S ribosomal protein S3 yes no 2 4.5337E-41 131.79 2 2 0.70091 0.8313 NaN 1 Median 0.70091 0.8313 NaN 1 0 Median NaN NaN NaN 0 0 Median 7872900 4701900 3171000 7872900 4701900 3171000 0 0 0 277 625 301;302 470;471;472;473 768;769;770;771;772;773;774;775;776 773 1927;1928 2 DEKIEELEALLQEAR KESLTSFYQEEIQERDEKIEELEALLQEAR DEKIEELEALLQEARQQSVAHQQSGSELAL R D E A R Q 2 1 0 1 0 1 5 0 0 1 3 1 0 0 0 0 0 0 0 0 0 0 15 1 1784.9156 O95235 O95235 645 659 KIF20A Kinesin-like protein KIF20A yes yes 2;3 1.0155E-17 68.576 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 6371000 6371000 0 0 0 0 6371000 6371000 0 278 716 303 474;475 777;778 777 2 DELAELSEAESEGDEKPK TPRIRKQTRPFSATKDELAELSEAESEGDE AELSEAESEGDEKPKLRRPCDRSNGYGRTE K D E P K L 2 0 0 2 0 0 6 1 0 0 2 2 0 0 1 2 0 0 0 0 0 0 18 1 1974.8906 Q461N2;B7ZML1;Q3L8U1;H3BTW3;B4DR07 Q461N2 576 593 CHD9 Chromodomain-helicase-DNA-binding protein 9 yes no 2 1.65E-09 71.685 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 279 548 304 476 779 779 804 0 DELHIVEAEAMNYEGSPIK HQLSLRTVSLGAGAKDELHIVEAEAMNYEG IVEAEAMNYEGSPIKVTLATLKMSVQPTVS K D E I K V 2 0 1 1 0 0 4 1 1 2 1 1 1 0 1 1 0 0 1 1 0 0 19 0 2144.0096 A0A140VJQ2;A0A0S2Z4G7;A4ZU86;A0A0S2Z491;P06748 A0A140VJQ2 55 73 NPM1 Nucleophosmin yes no 2;3 1.0635E-24 111.38 3 5 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 27730000 27730000 0 0 0 0 27730000 27730000 0 280 263 305;306;307 477;478;479;480;481;482;483;484 780;781;782;783;784;785;786;787;788;789;790;791;792;793;794;795;796;797 796 53 359 1 DENIHTSHITQDEFQR MAKPAEEQLDVGQSKDENIHTSHITQDEFQ ENIHTSHITQDEFQRNSDRNMEEHEEMGND K D E Q R N 0 1 1 2 0 2 2 0 2 2 0 0 0 1 0 1 2 0 0 0 0 0 16 0 1968.8926 Q03188;H0Y8J2 Q03188 441 456 CENPC Centromere protein C yes no 3 0.00016167 51.147 1 0.71215 0.90329 NaN 1 Median 0.71215 0.90329 NaN 1 0 Median NaN NaN NaN 0 0 Median 5954500 3337500 2617000 5954500 3337500 2617000 0 0 0 281 799 308 485 798;799 798 2 DEPNSTPEKTEQFYR HSIRSDSEDICLFTKDEPNSTPEKTEQFYR DEPNSTPEKTEQFYRKLLNKHGIKTVSQII K D E Y R K 0 1 1 1 0 1 3 0 0 0 0 1 0 1 2 1 2 0 1 0 0 0 15 1 1839.8275 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L234;I3L3C4 O76021 101 115 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 2 0.0009182 47.639 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 282 712 309 486;487 800;801 801 1064;1947 0 DEQLSPEEEEK GVIKTIGTTVGRRRRDEQLSPEEEEKRRIR RRRRDEQLSPEEEEKRRIRRERNKLAAAKC R D E E K R 0 0 0 1 0 1 5 0 0 0 1 1 0 0 1 1 0 0 0 0 0 0 11 0 1331.5729 C9JCN8;P15408 C9JCN8 77 87 FOSL2 Fos-related antigen 2 yes no 2 1.4189E-08 101.89 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 283 560 310 488 802;803 802 839 0 DETEFYLGK REHTALLKIEGVYARDETEFYLGKRCAYVY EGVYARDETEFYLGKRCAYVYKAKK_____ R D E G K R 0 0 0 1 0 0 2 1 0 0 1 1 0 1 0 0 1 0 1 0 0 0 9 0 1100.5026 F8WBS5;F8WB72;C9K025;P18077 F8WBS5 37 45 RPL35A 60S ribosomal protein L35a yes no 2 0.0049903 63.565 1 0.72273 0.88566 NaN 1 Median 0.72273 0.88566 NaN 1 0 Median NaN NaN NaN 0 0 Median 5575200 3416300 2158900 5575200 3416300 2158900 0 0 0 284 567 311 489 804;805 805 2 DETEFYLGKR REHTALLKIEGVYARDETEFYLGKRCAYVY GVYARDETEFYLGKRCAYVYKAKK______ R D E K R C 0 1 0 1 0 0 2 1 0 0 1 1 0 1 0 0 1 0 1 0 0 0 10 1 1256.6037 F8WBS5;F8WB72;C9K025;P18077 F8WBS5 37 46 RPL35A 60S ribosomal protein L35a yes no 2 0.00058871 69.954 2 0.43089 0.60676 6.5954 2 Median NaN NaN NaN 0 0 Median 0.43089 0.60676 6.5954 2 0 Median 30898000 21825000 9073300 0 0 0 30898000 21825000 9073300 285 567 312 490;491 806;807;808 806 3 DETIHIYDMK SAVAVNSRFVVTGSKDETIHIYDMKKKIEH VTGSKDETIHIYDMKKKIEHGALVHHSGTI K D E M K K 0 0 0 2 0 0 1 0 1 2 0 1 1 0 0 0 1 0 1 0 0 0 10 0 1263.5805 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 61 70 PAK1IP1 p21-activated protein kinase-interacting protein 1 yes no 2 0.011385 50.805 1 0.77613 0.98311 NaN 1 Median NaN NaN NaN 0 0 Median 0.77613 0.98311 NaN 1 0 Median 8000800 4724800 3276000 0 0 0 8000800 4724800 3276000 286 270 313 492 809 809 55 1 DEYTFSPGK NDGEDEFVPSDGLDKDEYTFSPGKSKATPE SDGLDKDEYTFSPGKSKATPEKSLHDKKSQ K D E G K S 0 0 0 1 0 0 1 1 0 0 0 1 0 1 1 1 1 0 1 0 0 0 9 0 1042.4607 Q02880;Q71UH4;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q02880 1419 1427 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 2 0.0026486 58.37 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 287 796 314 493;494 810;811 810 1271 0 DFATPSLHTSDQSPGK GFKKFVVTFMIFMARDFATPSLHTSDQSPG FATPSLHTSDQSPGKHMVTMDGVREEDLAP R D F G K H 1 0 0 2 0 1 0 1 1 0 1 1 0 1 2 3 2 0 0 0 0 0 16 0 1686.7849 A0A0A0MTR7;A0A0A0MTC1;Q63HN8 A0A0A0MTR7 2261 2276 RNF213 E3 ubiquitin-protein ligase RNF213 yes no 2 3.3879E-06 68.481 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 288 226 315 495 812;813;814 814 314 0 DFDREVEIR KTNSLRRRKLASFLKDFDREVEIRIKQIES LASFLKDFDREVEIRIKQIESDRQNLLKEV K D F I R I 0 2 0 2 0 0 2 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 9 1 1177.5728 Q53HL2;A8K7A2 Q53HL2 27 35 CDCA8 Borealin yes no 2;3 7.173E-08 100.48 1 2 0.64728 1.0125 9.5509 3 Median 0.78068 1.0125 NaN 1 0 Median 0.61906 1.0976 11.789 2 0 Median 317850000 185910000 131940000 18455000 10121000 8334300 299400000 175790000 123610000 289 837 316 496;497;498 815;816;817;818;819;820;821 818 7 DFGAQREEGR QRVHKRIQDIVGILRDFGAQREEGRSRSEY VGILRDFGAQREEGRSRSEYLNRLKKDLAI R D F G R S 1 2 0 1 0 1 2 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 10 1 1163.5319 P46087;F5GYR3 P46087 252 261 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes no 2;3 0.00032844 76.282 2 0.51132 0.90899 11.669 2 Median NaN NaN NaN 0 0 Median 0.51132 0.90899 11.669 2 0 Median 273170000 178810000 94359000 0 0 0 273170000 178810000 94359000 290 763 317 499;500 822;823;824 823 3 DFGEEHPFYDR QLLNTLTKKQKKHLRDFGEEHPFYDRVSRE KHLRDFGEEHPFYDRVSREEAKPQICQLSE R D F D R V 0 1 0 2 0 0 2 1 1 0 0 0 0 2 1 0 0 0 1 0 0 0 11 0 1410.584 A8K0P8;Q68CQ4 A8K0P8 26 36 DIEXF Digestive organ expansion factor homolog yes no 3 0.023644 15.202 1 0.38023 0.50245 NaN 1 Median NaN NaN NaN 0 0 Median 0.38023 0.50245 NaN 1 0 Median 6093400 3582000 2511400 0 0 0 6093400 3582000 2511400 291 337 318 501 825 825 0 DFQEYVEPGEDFPASPQRR IPPEEMKQMEQKLIRDFQEYVEPGEDFPAS YVEPGEDFPASPQRRNTASQEDKDDSVVLP R D F R R N 1 2 0 2 0 2 3 1 0 0 0 0 0 2 3 1 0 0 1 1 0 0 19 1 2266.0291 C9JGM7;Q6MZE7;B3KM42;E9PHI6;Q9Y6G9 C9JGM7 142 160 DYNC1LI1;DKFZp686A1525 Cytoplasmic dynein 1 light intermediate chain 1 yes no 3 2.1321E-14 92.95 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 292 424 319 502;503 826;827;828 827 629 0 DFQHLISSPLK VNEQSQITRRKKRKKDFQHLISSPLKKSRI KRKKDFQHLISSPLKKSRICDETANATSTL K D F L K K 0 0 0 1 0 1 0 0 1 1 2 1 0 1 1 2 0 0 0 0 0 0 11 0 1283.6874 B4DZG2;A0A024R8C1;Q15361 B4DZG2 58 68 TTF1 Transcription termination factor 1 yes no 2 1.4301E-07 80.371 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 293 103 320 504 829 829 143 0 DFSIHR LTAQWLPDVTRPEGKDFSIHRLVLGTHTSD PDVTRPEGKDFSIHRLVLGTHTSDEQNHLV K D F H R L 0 1 0 1 0 0 0 0 1 1 0 0 0 1 0 1 0 0 0 0 0 0 6 0 773.38204 Q09028;E9PNS6;E9PND5;C9JPP3 Q09028 60 65 RBBP4 Histone-binding protein RBBP4 yes no 2 0.0077401 88.201 1 0.97639 1.3843 NaN 1 Median NaN NaN NaN 0 0 Median 0.97639 1.3843 NaN 1 0 Median 122170000 59746000 62426000 0 0 0 122170000 59746000 62426000 294 803 321 505 830 830 1 DFSPEALK AYRLTPKLMEVCKEKDFSPEALKKANITFE MEVCKEKDFSPEALKKANITFEYMFEEVPI K D F L K K 1 0 0 1 0 0 1 0 0 0 1 1 0 1 1 1 0 0 0 0 0 0 8 0 905.44945 E5RGU4;E5RJT0;Q5BKY2;A0A087WZK9;Q6IB98;Q53HR0;Q53HG0;B3KS98;O15372 E5RGU4 197 204 EIF3H;EIF3S3 Eukaryotic translation initiation factor 3 subunit H yes no 2 0.0028272 64.654 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 295 201 322 506 831 831 283 0 DFSPEALKK AYRLTPKLMEVCKEKDFSPEALKKANITFE EVCKEKDFSPEALKKANITFEYMFEEVPIV K D F K K A 1 0 0 1 0 0 1 0 0 0 1 2 0 1 1 1 0 0 0 0 0 0 9 1 1033.5444 E5RGU4;E5RJT0;Q5BKY2;A0A087WZK9;Q6IB98;Q53HR0;Q53HG0;B3KS98;O15372 E5RGU4 197 205 EIF3H;EIF3S3 Eukaryotic translation initiation factor 3 subunit H yes no 2 0.00022158 74.944 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 296 201 323 507;508 832;833;834 832 283 0 DFSPLQTQTFNR YEHHTGKGEKCFSERDFSPLQTQTFNRETT SERDFSPLQTQTFNRETTIKCYSTQMKMEH R D F N R E 0 1 1 1 0 2 0 0 0 0 1 0 0 2 1 1 2 0 0 0 0 0 12 0 1452.6997 Q6P4F7 Q6P4F7 673 684 ARHGAP11A Rho GTPase-activating protein 11A yes yes 2 8.985E-26 104.59 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 297 861 324 509 835 835 1427 0 DFTDLIVINEDRK RGLALKKIIPQCIARDFTDLIVINEDRKTP ARDFTDLIVINEDRKTPNGLILSHLPNGPT R D F R K T 0 1 1 3 0 0 1 0 0 2 1 1 0 1 0 0 1 0 0 1 0 0 13 1 1576.8097 Q9H9Y2 Q9H9Y2 191 203 RPF1 Ribosome production factor 1 yes yes 2 0.00061975 67.385 1 0.66749 0.96591 NaN 1 Median NaN NaN NaN 0 0 Median 0.66749 0.96591 NaN 1 0 Median 18245000 10572000 7672900 0 0 0 18245000 10572000 7672900 298 929 325 510 836 836 1 DFTNEAPPAPLPDASASPLSPHRR TRQGRSEKRAFPRKRDFTNEAPPAPLPDAS PLPDASASPLSPHRRAKSLDRRSTEPSVTP R D F R R A 4 2 1 2 0 0 1 0 1 0 2 0 0 1 6 3 1 0 0 0 0 0 24 1 2542.2564 B9EGI2;Q6WCQ1;U6FSN9;Q8N236 B9EGI2 345 368 MPRIP;Mprip-Ntrk1 fusion gene Myosin phosphatase Rho-interacting protein;Tyrosine-protein kinase receptor yes no 3 4.4806E-08 40.454 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 299 553 326 511 837 837 813;814 0 DFVEDDTTHG NKVSHIDVITAEMAKDFVEDDTTHG_____ AEMAKDFVEDDTTHG_______________ K D F H G - 0 0 0 3 0 0 1 1 1 0 0 0 0 1 0 0 2 0 0 1 0 0 10 0 1134.4465 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 1208 1217 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 yes no 2 0.019142 45.081 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2016200 0 0 0 0 0 2016200 0 0 300 388 327 512 838 838 1 DGDESSPILTSFELVK VKCDDKEYGIVYYEKDGDESSPILTSFELV GDESSPILTSFELVKVPDPQMSMENLVESK K D G V K V 0 0 0 2 0 0 2 1 0 1 2 1 0 1 1 3 1 0 0 1 0 0 16 0 1735.8516 B4DPV9;A8MYT4;Q8NEB9 B4DPV9 176 191 PIK3C3 Phosphatidylinositol 3-kinase;Phosphatidylinositol 3-kinase catalytic subunit type 3 yes no 2 0.0004755 43.628 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 301 387 328 513 839 839 588;589 0 DGETLEGSDAEESLDK SEEKAADKAEGGPFKDGETLEGSDAEESLD GETLEGSDAEESLDKTAESSLLEDEIAQGE K D G D K T 1 0 0 3 0 0 4 2 0 0 2 1 0 0 0 2 1 0 0 0 0 0 16 0 1693.7166 B4DIS0;A0A024R7V7;Q9P2D1 B4DIS0 1206 1221 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes no 2 0.00030821 50.534 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 302 96 329 514 840 840 135 0 DGFHIR ARICANKYMVKSCGKDGFHIRVRLHPFHVI KYMVKSCGKDGFHIRVRLHPFHVIRINKML K D G I R V 0 1 0 1 0 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 0 0 6 0 743.37147 F8W7C6;A0A087WV22;X1WI28;X5D2T3;P27635;B8A6G2;X5D2W5;A6QRI9 F8W7C6 32 37 RPL10 60S ribosomal protein L10 yes no 2 0.024562 51.036 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 39604000 39604000 0 0 0 0 39604000 39604000 0 303 187 330 515 841;842 841 2 DGKFSPIQEK ATLDSCEENMVVPSRDGKFSPIQEKSPKQA VVPSRDGKFSPIQEKSPKQALSSHMYSASL R D G E K S 0 0 0 1 0 1 1 1 0 1 0 2 0 1 1 1 0 0 0 0 0 0 10 1 1147.5873 A0JLU2;B4DYG2;A8K5A6;O43683 A0JLU2 651 660 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 yes no 2 1.205E-182 190.24 1 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 304 297 331 516;517;518 843;844;845;846;847;848;849;850 850 442 0 DGQVINETSQHHDDLE THSKRTLLIKTVETRDGQVINETSQHHDDL GQVINETSQHHDDLE_______________ R D G L E - 0 0 1 3 0 2 2 1 2 1 1 0 0 0 0 1 1 0 0 1 0 0 16 0 1835.7922 V9HWE1;P08670;Q53HU8 V9HWE1 451 466 HEL113;VIM Vimentin yes no 2;3 0 206.43 3 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 44065000 0 0 22412000 0 0 21654000 0 0 305 731 332;333 519;520;521;522;523;524 851;852;853;854;855;856 851 1129;1959 4 DGQYILATGTYKPR ______________________________ KDGQYILATGTYKPRVRCYDTYQLSLKFER K D G P R V 1 1 0 1 0 1 0 2 0 1 1 1 0 0 1 0 2 0 2 0 0 0 14 1 1581.8151 B4DS83;Q9BSC4 B4DS83 13 26 NOL10 Nucleolar protein 10 yes no 2 0.00020053 75.683 1 0.66177 0.98379 NaN 1 Median NaN NaN NaN 0 0 Median 0.66177 0.98379 NaN 1 0 Median 23192000 14438000 8753500 0 0 0 23192000 14438000 8753500 306 493 334 525 857;858 858 2 DGSLIVSSSYDGLCR LPAHSDPVSAVHFNRDGSLIVSSSYDGLCR DGSLIVSSSYDGLCRIWDTASGQCLKTLID R D G C R I 0 1 0 2 1 0 0 2 0 1 2 0 0 0 0 4 0 0 1 1 0 0 15 0 1627.7512 P61964 P61964 182 196 WDR5 WD repeat-containing protein 5 yes yes 2 2.6362E-06 84.658 1 0.7036 0.87973 NaN 1 Median 0.7036 0.87973 NaN 1 0 Median NaN NaN NaN 0 0 Median 3243100 1695300 1547800 3243100 1695300 1547800 0 0 0 307 783 335 526 859 859 1 DGTSPEEEIEIER VKQIGINKKSVKSAKDGTSPEEEIEIERQK AKDGTSPEEEIEIERQKAEMALLMMDEDED K D G E R Q 0 1 0 1 0 0 5 1 0 2 0 0 0 0 1 1 1 0 0 0 0 0 13 0 1502.6736 Q9H501 Q9H501 691 703 ESF1 ESF1 homolog yes yes 2 6.8538E-05 87.18 1 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 308 926 336 527;528;529 860;861;862;863;864 861 1609;2038 0 DGVFLYFEDNAGVIVNNK HPAVVIRQRKSYRRKDGVFLYFEDNAGVIV FLYFEDNAGVIVNNKGEMKGSAITGPVAKE K D G N K G 1 0 3 2 0 0 1 2 0 1 1 1 0 2 0 0 0 0 1 3 0 0 18 0 2012.9844 J3KTJ3;J3KT29;Q9BTQ7;A0A024R1Q8;P62829 J3KTJ3 33 50 RPL23 60S ribosomal protein L23 yes no 2 7.3119E-65 137.59 1 0.66251 0.85957 NaN 1 Median NaN NaN NaN 0 0 Median 0.66251 0.85957 NaN 1 0 Median 11852000 6387000 5465000 0 0 0 11852000 6387000 5465000 309 34 337 530 865;866;867 865 3 DGVLTLANNVTPAK EDQVPALKTEAPLAKDGVLTLANNVTPAKD KDGVLTLANNVTPAKDVPPLSETEATPVPI K D G A K D 2 0 2 1 0 0 0 1 0 0 2 1 0 0 1 0 2 0 0 2 0 0 14 0 1411.7671 E7EVA0;B4DM10;P27816 E7EVA0 578 591 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 5.0806E-22 95.236 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 310 609 338 531;532 868;869 868 1923 0 DGVVEITGKHEER DVNHFAPDELTVKTKDGVVEITGKHEERQD TKDGVVEITGKHEERQDEHGYISRCFTRKY K D G E R Q 0 1 0 1 0 0 3 2 1 1 0 1 0 0 0 0 1 0 0 2 0 0 13 1 1467.7318 B4DL87;V9HW43;P04792 B4DL87 80 92 HEL-S-102;HSPB1 Heat shock protein beta-1 yes no 3 0.0018037 57.804 1 0.33936 0.43664 NaN 1 Median 0.33936 0.43664 NaN 1 0 Median NaN NaN NaN 0 0 Median 9084500 5690500 3394000 9084500 5690500 3394000 0 0 0 311 477 339 533 870 870 1 DHASIQMNVAEVDK VPRKCSASNRIIGAKDHASIQMNVAEVDKV KDHASIQMNVAEVDKVTGRFNGQFKTYAIC K D H D K V 2 0 1 2 0 1 1 0 1 1 0 1 1 0 0 1 0 0 0 2 0 0 14 0 1555.7301 Q8WVC2;Q6FGH5;P63220;Q9BYK1 Q8WVC2 28 41 RPS21 40S ribosomal protein S21 yes no 2 0.0071981 44.299 1 1.3743 1.7233 NaN 1 Median NaN NaN NaN 0 0 Median 1.3743 1.7233 NaN 1 0 Median 10093000 4072500 6020900 0 0 0 10093000 4072500 6020900 312 793 340 534 871 871 182 1 DHASQLSPVLSR SSSSSFRWQSEASSKDHASQLSPVLSRSPS SSKDHASQLSPVLSRSPSGDRPAVGHSGLK K D H S R S 1 1 0 1 0 1 0 0 1 0 2 0 0 0 1 3 0 0 0 1 0 0 12 0 1308.6786 A0A0J9YYE2;Q8IXZ2 A0A0J9YYE2 402 413 ZC3H3 Zinc finger CCCH domain-containing protein 3 yes no 2 0.0033315 50.897 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 313 259 341 535 872 872 355 0 DHAVVVGVYRPPPK NMKPQEQLTLEPYERDHAVVVGVYRPPPKV RDHAVVVGVYRPPPKVKN____________ R D H P K V 1 1 0 1 0 0 0 1 1 0 0 1 0 0 3 0 0 0 1 4 0 0 14 1 1532.8463 Q96BS4;P22087 Q96BS4 244 257 FBL rRNA 2-O-methyltransferase fibrillarin yes no 2;3 2.3232E-167 166.62 1 2 0.50722 0.82828 21.372 3 Median 0.87397 1.1278 NaN 1 0 Median 0.49905 0.78722 7.1909 2 0 Median 530070000 347630000 182450000 10772000 7117900 3653700 519300000 340510000 178790000 314 747 342 536;537;538 873;874;875;876;877;878;879 874 7 DHHQPLGR AVLSPSKTQATLKPKDHHQPLGRAKGVEKQ QATLKPKDHHQPLGRAKGVEKQQLPEQPFE K D H G R A 0 1 0 1 0 1 0 1 2 0 1 0 0 0 1 0 0 0 0 0 0 0 8 0 958.47331 P46087 P46087 744 751 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 3 0.0039495 43.769 1 0.56251 0.74703 NaN 1 Median NaN NaN NaN 0 0 Median 0.56251 0.74703 NaN 1 0 Median 10835000 6286000 4548600 0 0 0 10835000 6286000 4548600 315 763 343 539 880 880 1 DHPLPEVAHVK VKSEDFSLPAYMDRRDHPLPEVAHVKHLSA MDRRDHPLPEVAHVKHLSASQKALKEKEKA R D H V K H 1 0 0 1 0 0 1 0 2 0 1 1 0 0 2 0 0 0 0 2 0 0 11 0 1240.6564 Q86WV2;H3BPG0;H3BN72;H3BNV9;P13073 Q86WV2 43 53 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes no 3 0.0014649 63.415 1 1 0.86008 1.0686 11.339 2 Median 0.79136 0.98625 NaN 1 0 Median 0.93476 1.1578 NaN 1 0 Median 31984000 15764000 16219000 4877200 2602600 2274600 27106000 13162000 13944000 316 662 344 540;541 881;882;883 883 3 DHQYGLPIK VLLYDLRSDKPLLVKDHQYGLPIKSVHFQD KPLLVKDHQYGLPIKSVHFQDSLDLILSAD K D H I K S 0 0 0 1 0 1 0 1 1 1 1 1 0 0 1 0 0 0 1 0 0 0 9 0 1069.5556 B4DS83;Q9BSC4;H7C1Z3 B4DS83 218 226 NOL10 Nucleolar protein 10 yes no 2 2.3655E-38 139.74 1 0.77423 0.97241 NaN 1 Median NaN NaN NaN 0 0 Median 0.77423 0.97241 NaN 1 0 Median 47357000 26257000 21099000 0 0 0 47357000 26257000 21099000 317 493 345 542 884;885 884 2 DHQYQFLEDAVR CDTLTCRDCQLNAHKDHQYQFLEDAVRNQR AHKDHQYQFLEDAVRNQRKLLASLVKRLGD K D H V R N 1 1 0 2 0 2 1 0 1 0 1 0 0 1 0 0 0 0 1 1 0 0 12 0 1519.7056 B2R8R5;Q13263;M0R2I3;M0R3C0 B2R8R5 239 250 TRIM28 Transcription intermediary factor 1-beta yes no 2 0.007038 45.368 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1451000 1451000 0 1451000 1451000 0 0 0 0 318 408 346 543 886 886 1 DHSYVIAGYYQANER PMLEVALTLIDSWCKDHSYVIAGYYQANER DHSYVIAGYYQANERVKDASPNQVAEKVAS K D H E R V 2 1 1 1 0 1 1 1 1 1 0 0 0 0 0 1 0 0 3 1 0 0 15 0 1784.8118 Q53Y03;O43402 Q53Y03 84 98 COX4NB;EMC8 ER membrane protein complex subunit 8 yes no 3 0.00091778 38.028 1 0.7416 0.92545 NaN 1 Median 0.7416 0.92545 NaN 1 0 Median NaN NaN NaN 0 0 Median 2706100 1647400 1058700 2706100 1647400 1058700 0 0 0 319 700 347 544 887 887 1 DHTVSGDEDYCPR WVHDSIDYRFNHHCKDHTVSGDEDYCPRSK CKDHTVSGDEDYCPRSKKANLGKNASMNTQ K D H P R S 0 1 0 3 1 0 1 1 1 0 0 0 0 0 1 1 1 0 1 1 0 0 13 0 1549.6103 Q9UIG0 Q9UIG0 943 955 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 2 6.1401E-10 83.617 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 320 952 348 545;546 888;889;890 888 1702 0 DHVVSDFSEHGSLK GLEGLLTTKWLLRGKDHVVSDFSEHGSLKY KDHVVSDFSEHGSLKYLHENLPIPQRNTN_ K D H L K Y 0 0 0 2 0 0 1 1 2 0 1 1 0 1 0 3 0 0 0 2 0 0 14 0 1555.7267 P54886 P54886 768 781 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 3 9.0006E-05 65.092 1 1 1.5798 1.9348 32.458 2 Median 1.2976 1.538 NaN 1 0 Median 1.9233 2.434 NaN 1 0 Median 15756000 7108200 8648200 7679500 3555100 4124500 8076900 3553200 4523800 321 778 349 547;548 891;892;893 892 3 DHYPCVSSLEQLTELGR RRLQEKTSKLPDMLKDHYPCVSSLEQLTEL YPCVSSLEQLTELGRETDAFVCRPNAALCR K D H G R E 0 1 0 1 1 1 2 1 1 0 3 0 0 0 1 2 1 0 1 1 0 0 17 0 2002.9418 B2RMQ4;Q8WWK9 B2RMQ4 643 659 CKAP2 Cytoskeleton-associated protein 2 yes no 3 3.4874E-05 43.454 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 322 419 350 549 894 894 615;616 0 DHYQDPVPGITPSSSSR GQIFPTVNGLFRWFKDHYQDPVPGITPSSS YQDPVPGITPSSSSRTRTPASINATPANIN K D H S R T 0 1 0 2 0 1 0 1 1 1 0 0 0 0 3 4 1 0 1 1 0 0 17 0 1841.8544 Q7KZ85 Q7KZ85 1513 1529 SUPT6H Transcription elongation factor SPT6 yes yes 2 7.2167E-10 91.355 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 323 866 351 550 895 895 1442;2012 0 DIAAGEELLYDYGDR HDIDGVPHLILIASRDIAAGEELLYDYGDR DIAAGEELLYDYGDRSKASIEAHPWLKH__ R D I D R S 2 1 0 3 0 0 2 2 0 1 2 0 0 0 0 0 0 0 2 0 0 0 15 0 1698.7737 E3VVS3;A0A0C4DFR3;Q9NQR1 E3VVS3 295 309 SETD8 N-lysine methyltransferase SETD8 yes no 2 0.021598 30.059 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2256300 0 2256300 0 0 0 2256300 0 2256300 324 239 352 551 896 896 1 DIAAHIKK VECATQALEKYNIEKDIAAHIKKEFDKKYN EKYNIEKDIAAHIKKEFDKKYNPTWHCIVG K D I K K E 2 0 0 1 0 0 0 0 1 2 0 2 0 0 0 0 0 0 0 0 0 0 8 1 894.5287 Q6FGH9;P63167;F8VXL2;F8VRV5 Q6FGH9 37 44 DNCL1;DYNLL1 Dynein light chain 1, cytoplasmic yes no 2 0.029671 46.426 1 1.1047 1.3328 NaN 1 Median NaN NaN NaN 0 0 Median 1.1047 1.3328 NaN 1 0 Median 6299900 2581200 3718700 0 0 0 6299900 2581200 3718700 325 792 353 552 897 897 1 DIDHETVVEEQIIGENSPPDYSEYMTGK EGEFSVTMWSSDEKKDIDHETVVEEQIIGE GENSPPDYSEYMTGKKLPPGGIPGIDLSDP K D I G K K 0 0 1 3 0 1 5 2 1 3 0 1 1 0 2 2 2 0 2 2 0 0 28 0 3194.4238 P25490;H0YJU4;H0YJV7 P25490 231 258 YY1 Transcriptional repressor protein YY1 yes no 3 5.4764E-11 46.938 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 326 749 354 553;554 898;899 899 168 1167 0 DIDIHEVR MKVTEKIPVRHLYTKDIDIHEVRIGWSLTT VRHLYTKDIDIHEVRIGWSLTTSGMLLGEE K D I V R I 0 1 0 2 0 0 1 0 1 2 0 0 0 0 0 0 0 0 0 1 0 0 8 0 995.50361 Q96BA7;B3KX72;Q00839;B4DLR3;Q5RI18;Q7Z4Q5 Q96BA7 250 257 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U yes no 2 5.9304E-28 127.56 1 1 0.84734 1.1324 140.23 2 Median 0.33043 0.42013 NaN 1 0 Median 2.1729 3.0524 NaN 1 0 Median 105230000 35623000 69610000 12573000 8251200 4321300 92660000 27372000 65288000 327 453 355 555;556 900;901;902 900 3 DIDISSPEFK VTAYTVDVTGREGAKDIDISSPEFKIKIPR REGAKDIDISSPEFKIKIPRHELTEISNVD K D I F K I 0 0 0 2 0 0 1 0 0 2 0 1 0 1 1 2 0 0 0 0 0 0 10 0 1149.5554 Q09666;B4DTV0 Q09666 172 181 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 2 3.8589E-20 116.77 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 328 804 356 557;558 903;904;905;906;907;908;909 905 1315 0 DIDNNLITSTPR KEERENPSKRSRIERDIDNNLITSTPRAGE IERDIDNNLITSTPRAGEKPNKQISRVRRK R D I P R A 0 1 2 2 0 0 0 0 0 2 1 0 0 0 1 1 2 0 0 0 0 0 12 0 1357.6838 A0A024R5Q8;Q05D32;H0YMH7;H0YNU2;H0YNW9 A0A024R5Q8 77 88 CTDSPL2 CTD small phosphatase-like protein 2 yes no 2 7.559E-22 98.682 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 329 72 357 559;560;561 910;911;912 910 96;1789;1790 0 DIEELNFPWRSNCGEK D I E K 0 1 2 1 1 0 3 1 0 1 1 1 0 1 1 1 0 1 0 0 0 0 16 1 1992.9 REV__H0YAE9 yes no 3 0.0039932 21.458 1 0.5337 0.79421 NaN 1 Median NaN NaN NaN 0 0 Median 0.5337 0.79421 NaN 1 0 Median 23429000 16107000 7321400 0 0 0 23429000 16107000 7321400 + 330 976 358 562 913 913 1 DIEISTEEEK KDIIKEASEASKENRDIEISTEEEKDTGDL SKENRDIEISTEEEKDTGDLKDSSLLKTKR R D I E K D 0 0 0 1 0 0 4 0 0 2 0 1 0 0 0 1 1 0 0 0 0 0 10 0 1191.5507 Q4G0J3 Q4G0J3 333 342 LARP7 La-related protein 7 yes yes 2 0.0007403 81.92 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 331 832 359 563 914 914 1373;2001 0 DIENQYETQITQIEHEVSSSGQEVQSSAK DMRQEYEQLIAKNRKDIENQYETQITQIEH HEVSSSGQEVQSSAKEVTQLRHGVQELEIE K D I A K E 1 0 1 1 0 5 5 1 1 3 0 1 0 0 0 5 2 0 1 2 0 0 29 0 3263.5066 CON__P35527;P35527;K7EQQ3 CON__P35527 340 368 KRT9 Keratin, type I cytoskeletal 9 yes no 3 1.2762E-146 142.45 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 470930000 470930000 0 164640000 164640000 0 306290000 306290000 0 + 332 582 360 564;565 915;916;917;918 915 4 DIEVLSEDTDYEEDEVTK VISKPVSKSPERLRKDIEVLSEDTDYEEDE VLSEDTDYEEDEVTKKRKDVKKDTTDKSSK K D I T K K 0 0 0 4 0 0 5 0 0 1 1 1 0 0 0 1 2 0 1 2 0 0 18 0 2127.9219 H0Y7Y8;H7C5R6;A0A024R3V1;A0A024R3R1;Q4LE39 H0Y7Y8 185 202 ARID4B AT-rich interactive domain-containing protein 4B yes no 2 2.49E-06 55.452 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 333 55 361 566 919 919 57;1782 0 DIFPYSENK IFFFGTHETAFLGPKDIFPYSENKEKYGKP AFLGPKDIFPYSENKEKYGKPNKRKGFNEG K D I N K E 0 0 1 1 0 0 1 0 0 1 0 1 0 1 1 1 0 0 1 0 0 0 9 0 1111.5186 O75475;Q05CM9 O75475 57 65 PSIP1 PC4 and SFRS1-interacting protein yes no 2 0.0014151 64.439 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 334 710 362 567;568 920;921;922;923;924 923 1061 0 DIFYYEDDSEGEDIEK KIQTPAAPKQVFPSRDIFYYEDDSEGEDIE IFYYEDDSEGEDIEKESEGQAPCMAHACNS R D I E K E 0 0 0 4 0 0 4 1 0 2 0 1 0 1 0 1 0 0 2 0 0 0 16 0 1965.8004 B4DZG2;A0A024R8C1;Q15361;A0A087WY09 B4DZG2 864 879 TTF1 Transcription termination factor 1 yes no 2 8.9157E-27 119.56 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 335 103 363 569;570 925;926;927;928;929 927 144 0 DIGSESTEDQAMEDIK FPEVFGKEKVNELSKDIGSESTEDQAMEDI IGSESTEDQAMEDIKQMEAESISSSEEIVP K D I I K Q 1 0 0 3 0 1 3 1 0 2 0 1 1 0 0 2 1 0 0 0 0 0 16 0 1766.7516 CON__P02662 CON__P02662 43 58 yes yes 2 1.4725E-72 124.92 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 + 336 572 364 571 930 930 113 850;851 0 DIICQIAYAR YNTPKYRMIVRVTNRDIICQIAYARIEGDM RVTNRDIICQIAYARIEGDMIVCAAYAHEL R D I A R I 2 1 0 1 1 1 0 0 0 3 0 0 0 0 0 0 0 0 1 0 0 0 10 0 1221.6176 A2RUM7;Q59GX9;P46777;B3KTM6;Q9BUV4;Q5T7N0 A2RUM7 59 68 RPL5 60S ribosomal protein L5 yes no 2 7.5362E-11 86.011 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1090600 1090600 0 1090600 1090600 0 0 0 0 337 306 365 572 931 931 1 DIIHDPGR VDFAERHGYIKGIVKDIIHDPGRGAPLAKV YIKGIVKDIIHDPGRGAPLAKVVFRDPYRF K D I G R G 0 1 0 2 0 0 0 1 1 2 0 0 0 0 1 0 0 0 0 0 0 0 8 0 921.46683 E9PKZ0;P62917;G3V1A1;B4DVG7;E9PKU4 E9PKZ0 47 54 RPL8 60S ribosomal protein L8 yes no 2 0.019669 55.676 1 1 0.58431 0.77884 23.764 2 Median 0.74639 0.92135 NaN 1 0 Median 0.45742 0.65837 NaN 1 0 Median 251310000 164950000 86355000 59979000 32663000 27316000 191330000 132290000 59039000 338 624 366 573;574 932;933;934 933 3 DIIIFVGTPVQK GKAMHTPKPSVGEEKDIIIFVGTPVQKLDL EEKDIIIFVGTPVQKLDLTENLTGSKRRPQ K D I Q K L 0 0 0 1 0 1 0 1 0 3 0 1 0 1 1 0 1 0 0 2 0 0 12 0 1328.7704 P46013 P46013 1308 1319 MKI67 Antigen KI-67 yes yes 2 0.0015248 89.959 1 1 1.0763 1.4195 NaN 1 Median NaN NaN NaN 0 0 Median 1.0763 1.4195 NaN 1 0 Median 12891000 7151900 5739600 0 0 0 12891000 7151900 5739600 339 762 367;368 575;576 935;936;937 935 1972 1 DIISDTSGDFRK INRVYKEMYKTDLEKDIISDTSGDFRKLMV LEKDIISDTSGDFRKLMVALAK________ K D I R K L 0 1 0 3 0 0 0 1 0 2 0 1 0 1 0 2 1 0 0 0 0 0 12 1 1352.6572 H0YN52;H0YNA0;H0YN28;H0YL33;H0YNP5;H0YKS4;B3KRQ1;H0YMD0;H0YMU9;H0YM50;H0YN42;V9HW65;A0A024R5Z7;P07355;A6NMY6 H0YN52 41 52 ANXA2;HEL-S-270;ANXA2P2 Annexin;Annexin A2;Putative annexin A2-like protein yes no 2 0.0049758 51.092 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2364100 2364100 0 0 0 0 2364100 2364100 0 340 76 369 577;578 938;939;940 938 3 DIKEESDEEEEDDEESGRLR LDEFTGGMETLELQKDIKEESDEEEEDDEE SDEEEEDDEESGRLRFKTERKEGTIIRLSD K D I L R F 0 2 0 4 0 0 8 1 0 1 1 1 0 0 0 2 0 0 0 0 0 0 20 2 2408.0099 H7BXM6;A8MTF7;H7C0H2;Q96EV2 H7BXM6 155 174 RBM33 RNA-binding protein 33 yes no 3 1.1522E-11 62.611 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 341 384 370 579 941 941 585 0 DILETHLR VCVNLMKALKMSPYKDILETHLREKITAQS LKMSPYKDILETHLREKITAQSIEELCAVN K D I L R E 0 1 0 1 0 0 1 0 1 1 2 0 0 0 0 0 1 0 0 0 0 0 8 0 995.53999 P78527 P78527 1413 1420 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.021924 53.166 1 0.62265 0.82651 NaN 1 Median NaN NaN NaN 0 0 Median 0.62265 0.82651 NaN 1 0 Median 10885000 6245200 4639600 0 0 0 10885000 6245200 4639600 342 795 371 580 942 942 1 DILIQYDR YYQKYVDEASKKEIKDILIQYDRTLLVADP ASKKEIKDILIQYDRTLLVADPRRCESKKF K D I D R T 0 1 0 2 0 1 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 0 8 0 1034.5397 M0R210;P62249;A0A087WZ27 M0R210 93 100 RPS16;ZNF90 40S ribosomal protein S16 yes no 2 0.0064715 72.485 1 0.63269 0.8069 NaN 1 Median 0.63269 0.8069 NaN 1 0 Median NaN NaN NaN 0 0 Median 11125000 6877800 4247300 11125000 6877800 4247300 0 0 0 343 693 372 581 943 943 1 DINSVAIAPNDK PILLQAQTTQRCHDKDINSVAIAPNDKLLA HDKDINSVAIAPNDKLLATGSQDRTAKLWA K D I D K L 2 0 2 2 0 0 0 0 0 2 0 1 0 0 1 1 0 0 0 1 0 0 12 0 1255.6408 A0JLS5;J3KNP2;Q12788;A0A087WYP7 A0JLS5 243 254 TBL3 Transducin beta-like protein 3 yes no 2 0.023884 32.218 1 0.72531 0.83379 NaN 1 Median 0.72531 0.83379 NaN 1 0 Median NaN NaN NaN 0 0 Median 2091700 1244100 847600 2091700 1244100 847600 0 0 0 344 295 373 582 944 944 0 DINTFLGTPVQK GKAMHTPKPAVGEEKDINTFLGTPVQKLDQ EEKDINTFLGTPVQKLDQPGNLPGSNRRLQ K D I Q K L 0 0 1 1 0 1 0 1 0 1 1 1 0 1 1 0 2 0 0 1 0 0 12 0 1331.7085 P46013 P46013 1794 1805 MKI67 Antigen KI-67 yes yes 2 1.4485E-08 81.619 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3145900 0 3145900 0 0 0 3145900 0 3145900 345 762 374;375 583;584 945;946 945 1973 1 DINTFVGTPVEK GKAMHTPKAAVGEEKDINTFVGTPVEKLDL EEKDINTFVGTPVEKLDLLGNLPGSKRRPQ K D I E K L 0 0 1 1 0 0 1 1 0 1 0 1 0 1 1 0 2 0 0 2 0 0 12 0 1318.6769 P46013 P46013 1916 1927 MKI67 Antigen KI-67 yes yes 2 0.0012056 86.624 1 1.1592 1.3335 NaN 1 Median 1.1592 1.3335 NaN 1 0 Median NaN NaN NaN 0 0 Median 2113500 833440 1280100 2113500 833440 1280100 0 0 0 346 762 376 585 947 947 1 DIPGLTDTTVPR NLSVLNLVIVKKGEKDIPGLTDTTVPRRLG GEKDIPGLTDTTVPRRLGPKRASRIRKLFN K D I P R R 0 1 0 2 0 0 0 1 0 1 1 0 0 0 2 0 3 0 0 1 0 0 12 0 1283.6721 Q96DV6;A2A3R6;P62753;A2A3R5;Q9BZU1 Q96DV6 120 131 RPS6 40S ribosomal protein S6 yes no 2 0.00019712 97.456 1 1 0.66018 0.86926 40.258 2 Median 0.92701 1.1555 NaN 1 0 Median 0.47016 0.65392 NaN 1 0 Median 101240000 63013000 38226000 32400000 15913000 16487000 68839000 47100000 21739000 347 303 377 586;587 948;949;950 950 3 DIQLAR QSAAIHAKRVTIMPKDIQLARRIRGERA__ AKRVTIMPKDIQLARRIRGERA________ K D I A R R 1 1 0 1 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 6 0 714.40244 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;Q6NXT2;A8K4Y7 B4E380 101 106 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C yes no 2 0.00082824 94.95 1 0.717 0.88419 NaN 1 Median 0.717 0.88419 NaN 1 0 Median NaN NaN NaN 0 0 Median 63889000 36038000 27851000 63889000 36038000 27851000 0 0 0 348 399 378 588 951 951 1 DIQLARR QSAAIHAKRVTIMPKDIQLARRIRGERA__ KRVTIMPKDIQLARRIRGERA_________ K D I R R I 1 2 0 1 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 7 1 870.50355 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;Q6NXT2;A8K4Y7 B4E380 101 107 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C yes no 2 3.7105E-14 91.906 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 349 399 379 589 952 952 1 DIQSCTVEVHFQK SKKLSVLIHNSDEHKDIQSCTVEVHFQKII HKDIQSCTVEVHFQKIIDKEGDDYEVIPNS K D I Q K I 0 0 0 1 1 2 1 0 1 1 0 1 0 1 0 1 1 0 0 2 0 0 13 0 1589.7508 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9JVD8;C9J578;C9J9E4;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3 154 166 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 2;3 0.00010686 94.767 1 2 0.47865 0.59959 16.382 3 Median 0.6317 0.78062 NaN 1 0 Median 0.47381 0.5888 2.5672 2 0 Median 56320000 36317000 20003000 12800000 7778300 5021400 43520000 28538000 14982000 350 941 380 590;591;592 953;954;955;956;957 955 5 DISEASVFDAYVLPK KKFVIRNIVEAAAVRDISEASVFDAYVLPK DISEASVFDAYVLPKLYVKLHYCVSCAIHS R D I P K L 2 0 0 2 0 0 1 0 0 1 1 1 0 1 1 2 0 0 1 2 0 0 15 0 1652.8298 A0A024RB14;P62854;Q75MH1 A0A024RB14 52 66 RPS26 40S ribosomal protein S26 yes no 2 3.1809E-09 98.156 1 0.87526 1.0592 NaN 1 Median 0.87526 1.0592 NaN 1 0 Median NaN NaN NaN 0 0 Median 10444000 5552800 4890800 10444000 5552800 4890800 0 0 0 351 136 381 593 958;959 959 2 DISSSLNSLADSNAR NGNVEAKVVCLFRRRDISSSLNSLADSNAR DISSSLNSLADSNAREFEEESKQPGVSEQQ R D I A R E 2 1 2 2 0 0 0 0 0 1 2 0 0 0 0 5 0 0 0 0 0 0 15 0 1548.738 A0A024R534;O94776 A0A024R534 50 64 MTA2 Metastasis-associated protein MTA2 yes no 2 0.00089903 43.544 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3180800 0 3180800 0 0 0 3180800 0 3180800 352 67 382;383 594;595 960;961 960 77;78;79 1 DISTILDEERK GRGKDISTITGHRGKDISTILDEERKENKR HRGKDISTILDEERKENKRPQRAAAARRKK K D I R K E 0 1 0 2 0 0 2 0 0 2 1 1 0 0 0 1 1 0 0 0 0 0 11 1 1317.6776 Q96T23;H0YDG9 Q96T23 1062 1072 RSF1 Remodeling and spacing factor 1 yes no 2 0.0019149 67.726 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 4480900 4480900 0 0 0 0 4480900 4480900 0 353 910 384 596 962 962 1 DISTITGHR DDIKEADGGGVGRGKDISTITGHRGKDIST GVGRGKDISTITGHRGKDISTILDEERKEN K D I H R G 0 1 0 1 0 0 0 1 1 2 0 0 0 0 0 1 2 0 0 0 0 0 9 0 998.51451 Q96T23;H0YDG9 Q96T23 1051 1059 RSF1 Remodeling and spacing factor 1 yes no 2 0.0012014 70.919 1 0.92975 1.192 NaN 1 Median NaN NaN NaN 0 0 Median 0.92975 1.192 NaN 1 0 Median 15719000 8111700 7607000 0 0 0 15719000 8111700 7607000 354 910 385 597 963 963 1 DITNVSLYPVVK TTPPETQQSPHLSLKDITNVSLYPVVKIRR SLKDITNVSLYPVVKIRRLSLSPKKNKASP K D I V K I 0 0 1 1 0 0 0 0 0 1 1 1 0 0 1 1 1 0 1 3 0 0 12 0 1346.7446 B5BUA4;Q5FBB7;A0A024R2J4 B5BUA4 443 454 SGOL1 Shugoshin-like 1 yes no 2 0.00014271 77.662 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 355 529 386 598 964;965 964 2069 0 DIVEELSALK PTSTRRRPKTPLGKRDIVEELSALKQLTQT PLGKRDIVEELSALKQLTQTTHTDKVPGDE R D I L K Q 1 0 0 1 0 0 2 0 0 1 2 1 0 0 0 1 0 0 0 1 0 0 10 0 1115.6074 P46013 P46013 2129 2138 MKI67 Antigen KI-67 yes yes 2 0.00021815 70.942 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 356 762 387 599 966;967 967 1205 0 DKDDDEVFEK FRKLLLNRCQKEFEKDKDDDEVFEKKQKEM KEFEKDKDDDEVFEKKQKEMDEAATAEERG K D K E K K 0 0 0 4 0 0 2 0 0 0 0 2 0 1 0 0 0 0 0 1 0 0 10 1 1238.5303 C9J6B6;C9JF13;E7EX73;B4DSI9;E9PGM1;E7EUU4;B4DGF1;B2RU10;B2RU06;Q4LE58;Q04637 C9J6B6 690 699 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 yes no 2 6.5733E-08 101.35 1 5.9753 7.3334 NaN 1 Median NaN NaN NaN 0 0 Median 5.9753 7.3334 NaN 1 0 Median 9206800 1524400 7682400 0 0 0 9206800 1524400 7682400 357 420 388 600 968 968 1 DKEGTPPLTK LLINSELEKPQKVRKDKEGTPPLTKEDKTV QKVRKDKEGTPPLTKEDKTVVRQSPRRIKP K D K T K E 0 0 0 1 0 0 1 1 0 0 1 2 0 0 2 0 2 0 0 0 0 0 10 1 1084.5764 Q03164;E9PR05;Q9UPD0;Q9Y6P1 Q03164 333 342 KMT2A;MLL Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes no 2 5.3918E-06 98.337 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 358 798 389 601 969 969 1990 0 DKFPGEFMK IKESKNGKKIGVFSKDKFPGEFMKSWNDCL IGVFSKDKFPGEFMKSWNDCLNKEGFDKID K D K M K S 0 0 0 1 0 0 1 1 0 0 0 2 1 2 1 0 0 0 0 0 0 0 9 1 1097.5216 Q9Y5B9;Q0VGA3 Q9Y5B9 140 148 SUPT16H FACT complex subunit SPT16 yes no 2 0.0032131 57.96 2 0.71729 0.89654 NaN 1 Median NaN NaN NaN 0 0 Median 0.71729 0.89654 NaN 1 0 Median 20681000 13783000 6897900 0 0 0 20681000 13783000 6897900 359 967 390 602;603 970;971;972;973 971 231 4 DKLDETGNSLK LPVKGFRSYVDMYLKDKLDETGNSLKVIHE MYLKDKLDETGNSLKVIHEQVNHRWEVCLT K D K L K V 0 0 1 2 0 0 1 1 0 0 2 2 0 0 0 1 1 0 0 0 0 0 11 1 1218.6092 P11388 P11388 277 287 TOP2A DNA topoisomerase 2-alpha yes yes 2 5.7329E-05 96.89 2 3 0.86331 1.0529 8.2731 3 Median 0.86433 1.0573 0.59121 2 0 Median 0.7757 0.91631 NaN 1 0 Median 238050000 133040000 105010000 62890000 32974000 29916000 175160000 100060000 75095000 360 734 391;392 604;605;606;607;608 974;975;976;977;978;979;980;981 975 1960 6 DKMEGSDFESSGGR RRLDADLARFEADLKDKMEGSDFESSGGRG KDKMEGSDFESSGGRGLKSKSVNFFSLFYY K D K G R G 0 1 0 2 0 0 2 3 0 0 0 1 1 1 0 3 0 0 0 0 0 0 14 1 1500.6151 E9PEN0;A0A1B0GW41;Q8WYH8 E9PEN0 113 126 ING5 Inhibitor of growth protein 5 yes no 2 0.0013623 50.874 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 361 288 393 609 982 982 62 434 0 DKSDSPAIQLR NREREWEREVLGIKRDKSDSPAIQLRLKEP GIKRDKSDSPAIQLRLKEPMDVDVEDYYPA R D K L R L 1 1 0 2 0 1 0 0 0 1 1 1 0 0 1 2 0 0 0 0 0 0 11 1 1228.6412 B3KQE3;Q96ST3 B3KQE3 41 51 SIN3A Paired amphipathic helix protein Sin3a yes no 2 0.00032335 92.856 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 362 439 394 610;611 983;984;985 983 642 0 DKSPVREPIDNLTPEER KLSRRRSRSKSPFRKDKSPVREPIDNLTPE SPVREPIDNLTPEERDARTVFCMQLAARIR K D K E R D 0 2 1 2 0 0 3 0 0 1 1 1 0 0 3 1 1 0 0 1 0 0 17 2 1994.0069 Q5QP22;Q5QP23;H0Y4X3;G3XAC6;B4DRA0;B4DLM0;B3KWX7;Q68DD9;B4E1M7;Q14498 Q5QP22 134 150 RBM39;DKFZp781C0423 RNA-binding protein 39 yes no 3 8.5502E-11 92.95 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 363 452 395 612;613;614 986;987;988;989;990 988 664 0 DLAQALINR RPVTLRTNTLKTRRRDLAQALINRGVNLDP LKTRRRDLAQALINRGVNLDPLGKWSKTGL R D L N R G 2 1 1 1 0 1 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 9 0 1012.5665 P46087;F5GYR3 P46087 323 331 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes no 2 0.0022113 68.214 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 364 763 396 615 991 991 1 DLASPLIGRS LKISMIPQLNSKAVKDLASPLIGRS_____ SKAVKDLASPLIGRS_______________ K D L R S - 1 1 0 1 0 0 0 1 0 1 2 0 0 0 1 2 0 0 0 0 0 0 10 1 1027.5662 H0YMP3;Q7Z4Z4;Q5U0M0;Q53HG9;O95067 H0YMP3 261 270 CCNB2 G2/mitotic-specific cyclin-B2 yes no 2 1.7887E-05 93.839 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 365 659 397 616;617 992;993;994;995;996 993 986 0 DLAVPAALTPR TAVMIIAYHTVCTPRDLAVPAALTPRASPG CTPRDLAVPAALTPRASPGHSPHYFAASSP R D L P R A 3 1 0 1 0 0 0 0 0 0 2 0 0 0 2 0 1 0 0 1 0 0 11 0 1122.6397 Q8TEM1 Q8TEM1 1836 1846 NUP210 Nuclear pore membrane glycoprotein 210 yes yes 2 0.003546 69.01 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 366 892 398 618 997 997 2022 0 DLDAITDISPK NPTVGKSRQNPSQKRDLDAITDISPKQSTH SQKRDLDAITDISPKQSTHGERGHRCSDCG R D L P K Q 1 0 0 3 0 0 0 0 0 2 1 1 0 0 1 1 1 0 0 0 0 0 11 0 1186.6081 Q75MV2;B3KU58;Q8N718;B3KNK8;Q9Y2L8 Q75MV2 142 152 ZFP95;ZKSCAN5 Zinc finger protein with KRAB and SCAN domains 5 yes no 2 4.1802E-09 79.466 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 367 432 399 619 998 998 637 0 DLDEDELLGNLSETELK ______________________________ DEDELLGNLSETELKQLE____________ K D L L K Q 0 0 1 3 0 0 4 1 0 0 5 1 0 0 0 1 1 0 0 0 0 0 17 0 1931.9211 H0YNU8;Q5HYL6;Q9NYL9 H0YNU8 14 30 TMOD3;DKFZp686E1899 Tropomodulin-3 yes no 2 1.3291E-91 153.72 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 368 661 400 620 999;1000;1001 1001 987 0 DLDELSRYPEDK DQASNILASFGLSARDLDELSRYPEDKITP SARDLDELSRYPEDKITPENLPQILLQLKR R D L D K I 0 1 0 3 0 0 2 0 0 0 2 1 0 0 1 1 0 0 1 0 0 0 12 1 1478.6889 D6R991;D6REM6;Q68D11;A0A0R4J2E8;A8MXP9;P43243 D6R991 121 132 MATR3;DKFZp686K23100 Matrin-3 yes no 2 0.0018847 67.726 1 0.62055 0.78193 NaN 1 Median 0.62055 0.78193 NaN 1 0 Median NaN NaN NaN 0 0 Median 2895600 1706700 1188900 2895600 1706700 1188900 0 0 0 369 261 401 621 1002 1002 1 DLDILHNSSQMK KEILALIPNQNALLKDLDILHNSSQMKSMS LLKDLDILHNSSQMKSMSTFIEEAYKKLDA K D L M K S 0 0 1 2 0 1 0 0 1 1 2 1 1 0 0 2 0 0 0 0 0 0 12 0 1399.6766 A0A024RD28;Q7L2Z9 A0A024RD28 241 252 C6orf139;CENPQ Centromere protein Q yes no 2 0.0089426 44.829 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 370 166 402 622 1003;1004 1004 36 229 0 DLDITSPELR EVIIVLERSESWNLKDLDITSPELRSVCHV SWNLKDLDITSPELRSVCHVPGLKKMLRTC K D L L R S 0 1 0 2 0 0 1 0 0 1 2 0 0 0 1 1 1 0 0 0 0 0 10 0 1157.5928 P19474 P19474 261 270 TRIM21 E3 ubiquitin-protein ligase TRIM21 yes yes 2 0.00012291 70.977 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 371 744 403 623;624 1005;1006 1005 1964 0 DLDSPFFGIR RSCLPQLNCERPHGRDLDSPFFGIRPAFMC RPHGRDLDSPFFGIRPAFMCYVPSPVLASV R D L I R P 0 1 0 2 0 0 0 1 0 1 1 0 0 2 1 1 0 0 0 0 0 0 10 0 1165.5768 Q96C92 Q96C92 46 55 SDCCAG3 Serologically defined colon cancer antigen 3 yes yes 2 0.0084466 42.718 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 372 899 404 625 1007;1008 1008 1536 0 DLEAHIDSANK SMAVAARKKLEMDLKDLEAHIDSANKNRDE MDLKDLEAHIDSANKNRDEAIKQLRKLQAQ K D L N K N 2 0 1 2 0 0 1 0 1 1 1 1 0 0 0 1 0 0 0 0 0 0 11 0 1211.5782 A0A024R1N1;A0A0U4BW16;P35579;Q6ZNL4 A0A024R1N1 1621 1631 MYH9;FLJ00279 Myosin-9 yes no 2 5.7012E-64 133.81 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 25580000 0 25580000 0 0 0 25580000 0 25580000 373 32 405 626 1009 1009 1 DLEEDHACIPIKK IIAGAGELHLEICLKDLEEDHACIPIKKSD LKDLEEDHACIPIKKSDPVVSYRETVSEES K D L K K S 1 0 0 2 1 0 2 0 1 2 1 2 0 0 1 0 0 0 0 0 0 0 13 1 1566.7712 Q8TA90;P13639;B4DPU3;Q6PK56 Q8TA90 219 231 EEF2 Elongation factor 2 yes no 3 0.0028958 32.439 1 0.37361 0.44745 NaN 1 Median 0.37361 0.44745 NaN 1 0 Median NaN NaN NaN 0 0 Median 3383400 2203200 1180200 3383400 2203200 1180200 0 0 0 374 736 406 627 1010 1010 1 DLFDLNSSEEDDTEGFSER RKMADRKDEDRKQFKDLFDLNSSEEDDTEG LNSSEEDDTEGFSERGILRPLSTRHGVEDD K D L E R G 0 1 1 4 0 0 4 1 0 0 2 0 0 2 0 3 1 0 0 0 0 0 19 0 2203.9029 Q8NAK7;Q9H9J5;Q9Y3T9 Q8NAK7 128 146 NOC2L Nucleolar complex protein 2 homolog yes no 2 1.539E-168 153.68 4 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 375 883 407;408 628;629;630;631;632 1011;1012;1013;1014;1015;1016;1017;1018 1017 1485;1486 0 DLFDYSPPLHK KETQSPEQVKSEKLKDLFDYSPPLHKNLDA EKLKDLFDYSPPLHKNLDAREKSTFREESP K D L H K N 0 0 0 2 0 0 0 0 1 0 2 1 0 1 2 1 0 0 1 0 0 0 11 0 1330.6558 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 Q6DCA8 507 517 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 2.6924E-20 114.82 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 376 622 409 633;634 1019;1020;1021;1022;1023;1024 1023 948 0 DLIDNSFNR LALGAVIASSKKAKRDLIDNSFNRYTFNED SKKAKRDLIDNSFNRYTFNEDEGELPEWFV R D L N R Y 0 1 2 2 0 0 0 0 0 1 1 0 0 1 0 1 0 0 0 0 0 0 9 0 1092.52 B4DKU3;Q8IY81 B4DKU3 562 570 FTSJ3 pre-rRNA processing protein FTSJ3 yes no 2 1.9825E-28 125.75 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 377 474 410 635;636 1025;1026;1027;1028;1029;1030;1031 1028 679 0 DLLHPSLEEEK LKLIVIICFFVQLARDLLHPSLEEEKKKHK QLARDLLHPSLEEEKKKHKKKRLVQSPNSY R D L E K K 0 0 0 1 0 0 3 0 1 0 3 1 0 0 1 1 0 0 0 0 0 0 11 0 1308.6561 H0YMV8;Q71UM5;C9JLI6 H0YMV8 22 32 RPS27L 40S ribosomal protein S27;40S ribosomal protein S27-like yes no 2 0.00045809 91.087 1 0.9484 1.185 NaN 1 Median 0.9484 1.185 NaN 1 0 Median NaN NaN NaN 0 0 Median 4558000 2118300 2439600 4558000 2118300 2439600 0 0 0 378 660 411 637 1032 1032 1 DLLHPSLEEEKK LKLIVIICFFVQLARDLLHPSLEEEKKKHK LARDLLHPSLEEEKKKHKKKRLVQSPNSYF R D L K K K 0 0 0 1 0 0 3 0 1 0 3 2 0 0 1 1 0 0 0 0 0 0 12 1 1436.7511 H0YMV8;Q71UM5;C9JLI6 H0YMV8 22 33 RPS27L 40S ribosomal protein S27;40S ribosomal protein S27-like yes no 3 0.0016837 43.991 1 0.36003 0.43857 NaN 1 Median NaN NaN NaN 0 0 Median 0.36003 0.43857 NaN 1 0 Median 31589000 22155000 9434000 0 0 0 31589000 22155000 9434000 379 660 412 638 1033;1034 1033 2 DLLHPSPEEEK ______________________________ PLAKDLLHPSPEEEKRKHKKKRLVQSPNSY K D L E K R 0 0 0 1 0 0 3 0 1 0 2 1 0 0 2 1 0 0 0 0 0 0 11 0 1292.6248 P42677;Q5T4L4 P42677 6 16 RPS27 40S ribosomal protein S27 yes no 2 2.6716E-20 114.87 1 2 0.49375 0.62218 NaN 1 Median NaN NaN NaN 0 0 Median 0.49375 0.62218 NaN 1 0 Median 142640000 96295000 46346000 0 0 0 142640000 96295000 46346000 380 758 413;414 639;640;641 1035;1036;1037;1038;1039;1040;1041;1042;1043 1040 1188 2 DLLHPSPEEEKR ______________________________ LAKDLLHPSPEEEKRKHKKKRLVQSPNSYF K D L K R K 0 1 0 1 0 0 3 0 1 0 2 1 0 0 2 1 0 0 0 0 0 0 12 1 1448.726 P42677;Q5T4L4 P42677 6 17 RPS27 40S ribosomal protein S27 yes no 3 9.4031E-05 84.892 1 0.59122 0.90114 NaN 1 Median NaN NaN NaN 0 0 Median 0.59122 0.90114 NaN 1 0 Median 29686000 18340000 11346000 0 0 0 29686000 18340000 11346000 381 758 415 642 1044;1045 1045 2 DLLPSPAGPVPSK SSNRESSKQSAAKEKDLLPSPAGPVPSKDP EKDLLPSPAGPVPSKDPKTEHGSRKRTISQ K D L S K D 1 0 0 1 0 0 0 1 0 0 2 1 0 0 4 2 0 0 0 1 0 0 13 0 1276.7027 Q9UHB7 Q9UHB7 810 822 AFF4 AF4/FMR2 family member 4 yes yes 2 0.002918 48.004 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 382 950 416 643 1046 1046 1696 0 DLLSDLQDISDSER GDGRKPVKEEKMEERDLLSDLQDISDSERK RDLLSDLQDISDSERKTSSAESSSAESGSG R D L E R K 0 1 0 4 0 1 1 0 0 1 3 0 0 0 0 3 0 0 0 0 0 0 14 0 1604.753 Q59GL4;J3KS35;E7ESP2;B4E0M9;B4E0N4;A4VCI5;Q5QPR4;J3QR29;B4E3D9;A0A0D9SEI3;Q5QPR3;B7ZVY7;A0A0D9SER5;A0A0D9SEN2;J3QR44;Q9UQ88;P21127 Q59GL4 215 228 CDK11A;CDC2L1;CDK11B Cyclin-dependent kinase 11A;Cyclin-dependent kinase 11B yes no 2 0.0025048 46.481 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 383 248 417 644 1047 1047 347 0 DLPERDQFR NQLSRAVRELARRLRDLPERDQFRVRASAA LARRLRDLPERDQFRVRASAALLDKLYALG R D L F R V 0 2 0 2 0 1 1 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 9 1 1174.5731 Q9NV31 Q9NV31 64 72 IMP3 U3 small nucleolar ribonucleoprotein protein IMP3 yes yes 2 0.0013671 78.334 1 0.68741 1.1734 NaN 1 Median NaN NaN NaN 0 0 Median 0.68741 1.1734 NaN 1 0 Median 33753000 19284000 14469000 0 0 0 33753000 19284000 14469000 384 942 418 645 1048;1049 1049 2 DLQANVEHLVQK GADAAYIFEEPFTIRDLQANVEHLVQKMKT TIRDLQANVEHLVQKMKTTVKRGLVLRNEK R D L Q K M 1 0 1 1 0 2 1 0 1 0 2 1 0 0 0 0 0 0 0 2 0 0 12 0 1392.7361 A0A0S2Z4A8;Q7KYX9;B4E162;Q96I60;A0A0S2Z4I1;A0A024R0Y5;P08237 A0A0S2Z4A8 219 230 PFKM ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, muscle type yes no 2 9.8532E-20 92.943 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 4637400 0 4637400 0 0 0 4637400 0 4637400 385 23 419 646 1050 1050 1 DLQDELAGNSEQRK QEQIKQRTKLELKAKDLQDELAGNSEQRKR KDLQDELAGNSEQRKRLLKERQKLLEKIEE K D L R K R 1 1 1 2 0 2 2 1 0 0 2 1 0 0 0 1 0 0 0 0 0 0 14 1 1601.7645 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 311 324 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 yes no 3 0.012935 28.779 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2246800 2246800 0 0 0 0 2246800 2246800 0 386 388 420 647 1051 1051 1 DLQSPDFTTGFHSDK TSDSEGSYAGVGSPRDLQSPDFTTGFHSDK DLQSPDFTTGFHSDKIEAKVKPYVNGTSPV R D L D K I 0 0 0 3 0 1 0 1 1 0 1 1 0 2 1 2 2 0 0 0 0 0 15 0 1693.7584 E9PDR5;B7ZLD4;E7EPI0;B7ZLE0;Q9P2D0 E9PDR5 841 855 IBTK Inhibitor of Bruton tyrosine kinase yes no 2 0.00083834 44.616 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 387 547 421 648 1052 1052 803 0 DLSPEPAPDEGPR SKKRPRLGDLGGGSRDLSPEPAPDEGPRRD SRDLSPEPAPDEGPRRDGDPAPKRLASLNA R D L P R R 1 1 0 2 0 0 2 1 0 0 1 0 0 0 4 1 0 0 0 0 0 0 13 0 1378.6365 A0A024R9K2;Q8TBE0 A0A024R9K2 182 194 BAHD1 Bromo adjacent homology domain-containing 1 protein yes no 2 2.3107E-05 78.486 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 388 118 422 649;650 1053;1054;1055 1053 169 0 DLTDYLMK YALPHAILRLDLAGRDLTDYLMKILTERGY RLDLAGRDLTDYLMKILTERGYSFTTTAER R D L M K I 0 0 0 2 0 0 0 0 0 0 2 1 1 0 0 0 1 0 1 0 0 0 8 0 997.47903 P63261;B4E3A4;Q8WVW5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4E335;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;I3L3I0;I3L1U9;B3KUD3;B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;V9HVZ7;I3L4N8;B4DUI8;B3KW67;A8K3K1;Q13707;Q562R1;K4EQ44;K4EP00;K4ENJ5;A0AUL6 P63261 184 191 ACTG1;PS1TP5BP1;ACTB;ACTA2;ACTG2;ACTA1;ACTC1;HEL-176;ACTBL2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2 yes no 2 0.022218 55.676 1 1 1.7225 2.12 64.004 2 Median 1.1094 1.3483 NaN 1 0 Median 2.6743 3.3333 NaN 1 0 Median 39496000 11550000 27946000 5875200 2493500 3381800 33620000 9056100 24564000 389 794 423 651;652 1056;1057;1058 1058 184 3 DLTIPESSTVK EQSPRKRGRPPKDEKDLTIPESSTVKGMMA KDEKDLTIPESSTVKGMMAGPMAAFKWQPT K D L V K G 0 0 0 1 0 0 1 0 0 1 1 1 0 0 1 2 2 0 0 1 0 0 11 0 1188.6238 K7EMM8;D3DUE6;D3DUE7;Q49A26;K7EPU6 K7EMM8 168 178 GLYR1;N-PAC Putative oxidoreductase GLYR1 yes no 2 0.014759 53.967 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 390 592 424 653 1059 1059 884;885;1911 0 DLTTAGAVTQCYR YDSRSGTHNMYREYRDLTTAGAVTQCYRDM YRDLTTAGAVTQCYRDMGARHRARAHSIQI R D L Y R D 2 1 0 1 1 1 0 1 0 0 1 0 0 0 0 0 3 0 1 1 0 0 13 0 1454.6824 M0R0P7;M0R3D6;M0R1A7;M0R117;B4DM74;B2R4C0;Q02543;Q32XH3 M0R0P7 60 72 RPL18A 60S ribosomal protein L18a yes no 2 7.0568E-06 93.843 1 1 0.65065 0.84204 1.2716 2 Median 0.66828 0.84965 NaN 1 0 Median 0.63348 0.83451 NaN 1 0 Median 17968000 9810100 8158300 6265700 3839900 2425800 11703000 5970200 5732500 391 397 425 654;655 1060;1061;1062;1063 1061 4 DLVAQAPLKPK KIHPLVRLPLATIVKDLVAQAPLKPKTPRG TIVKDLVAQAPLKPKTPRGTKTPINRNQLS K D L P K T 2 0 0 1 0 1 0 0 0 0 2 2 0 0 2 0 0 0 0 1 0 0 11 1 1178.7023 A0A024R534;O94776 A0A024R534 523 533 MTA2 Metastasis-associated protein MTA2 yes no 2 0.0022428 60.91 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 392 67 426 656 1064 1064 1 DLVLPTQALPASPALK GAQDSEAAFAKLDQKDLVLPTQALPASPAL LVLPTQALPASPALKNKRPRKDENESSAPA K D L L K N 3 0 0 1 0 1 0 0 0 0 4 1 0 0 3 1 1 0 0 1 0 0 16 0 1632.9451 J3KSZ6;U3KQ35;H3BR06;Q15554 J3KSZ6 98 113 TERF2 Telomeric repeat-binding factor 2 yes no 2 3.7518E-05 61.641 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 393 665 427 657 1065 1065 990 0 DLVQPDKPASPK ADSLRVLSGHLMQTRDLVQPDKPASPKFIV QTRDLVQPDKPASPKFIVTLDGVPSPP___ R D L P K F 1 0 0 2 0 1 0 0 0 0 1 2 0 0 3 1 0 0 0 1 0 0 12 1 1293.6929 G3V4R5;G3V411;H0YJA2;Q6PJT7 G3V4R5 183 194 ZC3H14 Zinc finger CCCH domain-containing protein 14 yes no 2 0.023629 50.467 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 394 643 428 658 1066 1066 975 0 DLVWLEEIQEEAER CDQKLMEFLCNMDNKDLVWLEEIQEEAERM KDLVWLEEIQEEAERMFTREFSKEPELMPK K D L E R M 1 1 0 1 0 1 5 0 0 1 2 0 0 0 0 0 0 1 0 1 0 0 14 0 1757.8472 Q9NQS7;B3KPD3;E9PM67 Q9NQS7 30 43 INCENP Inner centromere protein yes no 2 0.00024895 67.456 1 0.87521 1.0923 NaN 1 Median 0.87521 1.0923 NaN 1 0 Median NaN NaN NaN 0 0 Median 2921000 1464000 1457000 2921000 1464000 1457000 0 0 0 395 932 429 659 1067;1068;1069 1068 3 DMDEPSPVPNVEEVTLPK SKRGHREEEQEDLTKDMDEPSPVPNVEEVT EPSPVPNVEEVTLPKTVNTKKDSESAPVKG K D M P K T 0 0 1 2 0 0 3 0 0 0 1 1 1 0 4 1 1 0 0 3 0 0 18 0 1994.9507 B4DF22;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2 B4DF22 231 248 SMARCC2 SWI/SNF complex subunit SMARCC2 yes no 2 5.6273E-05 44.567 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 396 137 430 660;661 1070;1071;1072 1071 30 198 0 DNFFSLTPK QIYENDNKGVHDLEKDNFFSLTPKDKETIS VHDLEKDNFFSLTPKDKETISENLQVTNEF K D N P K D 0 0 1 1 0 0 0 0 0 0 1 1 0 2 1 1 1 0 0 0 0 0 9 0 1067.5288 B7Z7S9;Q562F6 B7Z7S9 839 847 SGOL2 Shugoshin-like 2 yes no 2 0.0033283 78.548 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 397 543 431 662 1073;1074 1074 1897 0 DNFGFIETANHDK NSNSKRLLGYVATLKDNFGFIETANHDKEI LKDNFGFIETANHDKEIFFHYSEFSGDVDS K D N D K E 1 0 2 2 0 0 1 1 1 1 0 1 0 2 0 0 1 0 0 0 0 0 13 0 1506.6739 E9PLT0;Q96L66;Q9GZV0;A0A024R0K2;A0A024R0E2;O75534;Q9UG93 E9PLT0 398 410 CSDE1;UNR;DKFZp586J0620 Cold shock domain-containing protein E1 yes no 2 3.1382E-09 77.674 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 5782200 0 5782200 0 0 0 5782200 0 5782200 398 13 432 663 1075;1076 1076 2 DNHNLIER TDAESRALAKERQKKDNHNLIERRRRFNIN AKERQKKDNHNLIERRRRFNINDRIKELGM K D N E R R 0 1 2 1 0 0 1 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 8 0 1009.4941 A0A1B0GXL9;B1AKB4;A0A024RCY3;B4DPL3;B0QYS6;B0QYS7;P19484;Q75KY0;B7Z757;B1AKB5;C9JBI8;A0A0H3W5T2;B4DNC7;A8K5K3;O14948;O75030;B4DIA5;A0A024QZ23;P19532 B4DIA5 238 245 TFEB;TFEC;MITF;TFE3 Transcription factor EB;Transcription factor EC;Microphthalmia-associated transcription factor;Transcription factor E3 no no 2 0.024443 47.561 1 0.71778 0.93774 NaN 1 Median NaN NaN NaN 0 0 Median 0.71778 0.93774 NaN 1 0 Median 12667000 6615300 6052200 0 0 0 12667000 6615300 6052200 399 165;0 433 664 1077 1077 1 DNIQGITK GLGKGGAKRHRKVLRDNIQGITKPAIRRLA RHRKVLRDNIQGITKPAIRRLARRGGVKRI R D N T K P 0 0 1 1 0 1 0 1 0 2 0 1 0 0 0 0 1 0 0 0 0 0 8 0 887.47125 B2R4R0;P62805;Q0VAS5 B2R4R0 25 32 HIST1H4H;HIST1H4A Histone H4 yes no 2 1.1237E-09 98.458 2 1 0.64204 0.80926 NaN 1 Median NaN NaN NaN 0 0 Median 0.64204 0.80926 NaN 1 0 Median 150050000 104930000 45117000 32345000 32345000 0 117700000 72586000 45117000 400 400 434 665;666;667 1078;1079;1080;1081;1082;1083;1084;1085 1079 8 DNIQGITKPAIR GLGKGGAKRHRKVLRDNIQGITKPAIRRLA VLRDNIQGITKPAIRRLARRGGVKRISGLI R D N I R R 1 1 1 1 0 1 0 1 0 3 0 1 0 0 1 0 1 0 0 0 0 0 12 1 1324.7463 B2R4R0;P62805;Q0VAS5 B2R4R0 25 36 HIST1H4H;HIST1H4A Histone H4 yes no 2;3 1.4289E-31 99.539 2 5 0.71978 0.98341 7.6765 3 Median 0.77468 1.0081 10.666 2 0 Median 0.61407 0.98341 NaN 1 0 Median 327030000 177150000 149880000 93884000 49144000 44740000 233150000 128010000 105140000 401 400 435 668;669;670;671;672;673;674 1086;1087;1088;1089;1090;1091;1092;1093;1094;1095;1096;1097;1098;1099;1100;1101;1102 1101 17 DNIQGITKPAIRR GLGKGGAKRHRKVLRDNIQGITKPAIRRLA LRDNIQGITKPAIRRLARRGGVKRISGLIY R D N R R L 1 2 1 1 0 1 0 1 0 3 0 1 0 0 1 0 1 0 0 0 0 0 13 2 1480.8474 B2R4R0;P62805;Q0VAS5 B2R4R0 25 37 HIST1H4H;HIST1H4A Histone H4 yes no 3 0.0016732 51.875 1 1 0.73861 0.95309 15.504 2 Median 0.88363 1.0635 NaN 1 0 Median 0.61739 0.85413 NaN 1 0 Median 46184000 28843000 17340000 5803700 3501100 2302600 40380000 25342000 15038000 402 400 436 675;676 1103;1104 1103 2 DNLVSSIHTDDSLEVERR VVGSDNEDEQDFSSKDNLVSSIHTDDSLEV VSSIHTDDSLEVERRVTQHESDNENEIQIQ K D N R R V 0 2 1 3 0 0 2 0 1 1 2 0 0 0 0 3 1 0 0 2 0 0 18 1 2084.0134 Q5VZL5;A0A0A0MSN3 Q5VZL5 99 116 ZMYM4 Zinc finger MYM-type protein 4 yes no 3 3.1158E-06 46.982 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 403 853 437 677 1105 1105 2009 0 DNPSPEPQLDDIKR APTKPPVGPKTSPLKDNPSPEPQLDDIKRE KDNPSPEPQLDDIKRELRAEVDIIEQMSSS K D N K R E 0 1 1 3 0 1 1 0 0 1 1 1 0 0 3 1 0 0 0 0 0 0 14 1 1622.79 Q96JC9 Q96JC9 162 175 EAF1 ELL-associated factor 1 yes yes 2 0.0010206 50.827 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 404 905 438 678 1106 1106 1546 0 DNQESSDAELSSSEYIK LLEDTLFPSSKKLKKDNQESSDAELSSSEY QESSDAELSSSEYIKTDLDAMDIKGQESSS K D N I K T 1 0 1 2 0 1 3 0 0 1 1 1 0 0 0 5 0 0 1 0 0 0 17 0 1900.8174 Q96JM3 Q96JM3 622 638 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 1.2703E-05 56.851 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 405 906 439 679 1107 1107 1549 0 DNTFFRESPVGR FYSSHYARERSPYKRDNTFFRESPVGRKDS YKRDNTFFRESPVGRKDSPHSRSGSSVSSR R D N G R K 0 2 1 1 0 0 1 1 0 0 0 0 0 2 1 1 1 0 0 1 0 0 12 1 1423.6844 F8VPY7;F8VWU8;F8WF16;B7Z615;B7Z8L1;F8W6A0;B7Z8M9;F8W0Q9;B7Z695;Q8NEY8 F8VPY7 133 144 PPHLN1 Periphilin-1 yes no 3 0.0022268 43.592 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 406 541 440 680;681 1108;1109 1109 784 0 DNTSVYHISGK VIPNSNFYVSRTACRDNTSVYHISGKKKTF TACRDNTSVYHISGKKKTFKDVGNLLRSHG R D N G K K 0 0 1 1 0 0 0 1 1 1 0 1 0 0 0 2 1 0 1 1 0 0 11 0 1219.5833 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9JVD8;C9J578;C9J9E4 Q9NTJ3 192 202 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 2 0.010475 56.043 2 0.85871 1.04 NaN 1 Median 0.85871 1.04 NaN 1 0 Median NaN NaN NaN 0 0 Median 12751000 8609400 4141900 12751000 8609400 4141900 0 0 0 407 941 441 682;683 1110;1111 1110 2 DPALNSGVSQKPDPAK TTGAKKRAAPKGTKRDPALNSGVSQKPDPA PALNSGVSQKPDPAKTKNRRKRKPSTSDDS R D P A K T 2 0 1 2 0 1 0 1 0 0 1 2 0 0 3 2 0 0 0 1 0 0 16 1 1622.8264 P11388 P11388 1444 1459 TOP2A DNA topoisomerase 2-alpha yes yes 2 0.0014581 48.527 1 0.83297 0.99473 NaN 1 Median NaN NaN NaN 0 0 Median 0.83297 0.99473 NaN 1 0 Median 4438000 2418300 2019700 0 0 0 4438000 2418300 2019700 408 734 442 684 1112;1113 1113 2 DPAQPMSPGEATQSGAR ______________________________ AQPMSPGEATQSGARPADRYGLLKHSREFL R D P A R P 3 1 0 1 0 2 1 2 0 0 0 0 1 0 3 2 1 0 0 0 0 0 17 0 1698.7631 Q9BQG0;B4DZZ1;B4DWP5 Q9BQG0 5 21 MYBBP1A Myb-binding protein 1A yes no 2 3.6443E-06 61.815 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 409 914 443 685 1114;1115 1115 209 1574 0 DPFAHLPK LVGERVTLAAEPKAKDPFAHLPKSTFVLDE AAEPKAKDPFAHLPKSTFVLDEFKRKYSNE K D P P K S 1 0 0 1 0 0 0 0 1 0 1 1 0 1 2 0 0 0 0 0 0 0 8 0 923.4865 B4DUP0;Q53YD7;P26641 B4DUP0 47 54 EEF1G Elongation factor 1-gamma yes no 2 0.006335 75.189 1 1.314 1.6392 NaN 1 Median NaN NaN NaN 0 0 Median 1.314 1.6392 NaN 1 0 Median 9862700 3910900 5951800 0 0 0 9862700 3910900 5951800 410 500 444 686 1116 1116 1 DPFSPDKK SELWNDELQSRKKRKDPFSPDKKKPVVVSG QSRKKRKDPFSPDKKKPVVVSGPYIVYMLQ K D P K K K 0 0 0 2 0 0 0 0 0 0 0 2 0 1 2 1 0 0 0 0 0 0 8 1 932.46035 H0YHD0;B3KU43;B4DLQ5;Q5PSV4 H0YHD0 109 116 BRMS1L Breast cancer metastasis-suppressor 1-like protein yes no 2 0.0014707 84.507 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 411 445 445 687 1117;1118 1118 651 0 DPGGITAGSTDEPPMLTK GVPEEAQPPRLGQERDPGGITAGSTDEPPM GITAGSTDEPPMLTKEEPVPELLEAETMEM R D P T K E 1 0 0 2 0 0 1 3 0 1 1 1 1 0 3 1 3 0 0 0 0 0 18 0 1785.8455 I3L1Q2;Q8WUZ0 I3L1Q2 148 165 BCL7C B-cell CLL/lymphoma 7 protein family member C yes no 2 0.0011339 40.014 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 412 676 446 688 1119 1119 145 1001;1935 0 DPNSATATAPPSPLK TTNGNMHRHMKIHEKDPNSATATAPPSPLK DPNSATATAPPSPLK_______________ K D P L K - 3 0 1 1 0 0 0 0 0 0 1 1 0 0 4 2 2 0 0 0 0 0 15 0 1465.7413 C9JPJ6;C9JU34;A0A024QZU8;Q92766 C9JPJ6 150 164 RREB1 Ras-responsive element-binding protein 1 yes no 2 7.4207E-07 85.493 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 413 8 447 689 1120 1120 11 0 DPSLPVASSSSSSSK GSKSASRTHRGSHRKDPSLPVASSSSSSSK DPSLPVASSSSSSSKRGKKMCSDGEKAEKR K D P S K R 1 0 0 1 0 0 0 0 0 0 1 1 0 0 2 8 0 0 0 1 0 0 15 0 1434.6838 D2CPI8 D2CPI8 164 178 yes yes 2 0.00092044 46.481 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 414 586 448 690 1121 1121 867;868;869;870;871;872;873 0 DQEALEAVKR NKQAEVKKMDSGYRKDQEALEAVKRLKEKL SGYRKDQEALEAVKRLKEKLEAEMKKLNYE K D Q K R L 2 1 0 1 0 1 2 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 10 1 1157.6041 B7ZLZ7;A0A024R158;O95347;A8K984;B3KMB1;Q2KQ72;Q05BV1 B7ZLZ7 447 456 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 yes no 2 0.010011 55.084 1 0.39567 0.56889 NaN 1 Median NaN NaN NaN 0 0 Median 0.39567 0.56889 NaN 1 0 Median 17485000 12398000 5086600 0 0 0 17485000 12398000 5086600 415 27 449 691 1122 1122 1 DQFLDTLQAHGHDVNSFVR VLSGDQLEAAARDTRDQFLDTLQAHGHDVN DTLQAHGHDVNSFVRSRVLQLFTRIVQQKA R D Q V R S 1 1 1 3 0 2 0 1 2 0 2 0 0 2 0 1 1 0 0 2 0 0 19 0 2198.0505 Q15021;B4E0B7;B3KY03;B3KMS0;E7EN77;Q6ZV00 Q15021 363 381 NCAPD2 Condensin complex subunit 1 yes no 3 0.0070443 22.118 1 0.47385 0.63287 NaN 1 Median NaN NaN NaN 0 0 Median 0.47385 0.63287 NaN 1 0 Median 30611000 20097000 10514000 0 0 0 30611000 20097000 10514000 416 820 450 692 1123 1123 1 DQGTYEDYVEGLR ______________________________ NKDQGTYEDYVEGLRVFDKEGNGTVMGAEI K D Q L R V 0 1 0 2 0 1 2 2 0 0 1 0 0 0 0 0 1 0 2 1 0 0 13 0 1543.6791 H0YI43;F8VZU9;G3V1Y7;Q6IBG5;F8VPF3;F8W1R7;J3KND3;G8JLA2;G3V1V0;F8W180;B7Z6Z4;P60660 H0YI43 4 16 MYL6 Myosin light polypeptide 6 yes no 2 0.0012463 60.49 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 4177900 0 4177900 0 0 0 4177900 0 4177900 417 542 451 693 1124;1125 1125 2 DQIVDLTVGNNK QKNYSPYYNTIDDLKDQIVDLTVGNNKTLL DLKDQIVDLTVGNNKTLLDIDNTRMTLDDF K D Q N K T 0 0 2 2 0 1 0 1 0 1 1 1 0 0 0 0 1 0 0 2 0 0 12 0 1314.6779 CON__P35527;P35527 CON__P35527 213 224 KRT9 Keratin, type I cytoskeletal 9 yes no 2 4.9566E-20 96.009 1 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 96719000 96719000 0 56879000 56879000 0 39841000 39841000 0 + 418 582 452 694;695;696 1126;1127;1128 1126 3 DQLQEQLQALK EQQKATEKERVAQEKDQLQEQLQALKESLK AQEKDQLQEQLQALKESLKVTKGSLEEEKR K D Q L K E 1 0 0 1 0 4 1 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 11 0 1312.6987 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q59HB8;A0A024R5G4;F5H4J1;A8K394 A0A087WY61 698 708 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 yes no 2 4.2238E-08 81.95 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2647300 2647300 0 1050900 1050900 0 1596300 1596300 0 419 71 453 697;698 1129;1130 1129 2 DQNYPGAIAIHHPNVAEK ANPAFNLFWAGWDRRDQNYPGAIAIHHPNV YPGAIAIHHPNVAEKRISNSTSPTSFVAWG R D Q E K R 3 0 2 1 0 1 1 1 2 2 0 1 0 0 2 0 0 0 1 1 0 0 18 0 1972.9755 CON__P15636 CON__P15636 343 360 yes yes 3;4 9.9447E-06 45.257 3 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 473500000 473500000 0 462460000 462460000 0 11038000 11038000 0 + 420 581 454 699;700;701;702;703;704 1131;1132;1133;1134;1135;1136;1137;1138;1139 1133 9 DQNYPGAIAIHHPNVAEKR ANPAFNLFWAGWDRRDQNYPGAIAIHHPNV PGAIAIHHPNVAEKRISNSTSPTSFVAWGG R D Q K R I 3 1 2 1 0 1 1 1 2 2 0 1 0 0 2 0 0 0 1 1 0 0 19 1 2129.0766 CON__P15636 CON__P15636 343 361 yes yes 3;4 0.0074752 22.985 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 7080000 7080000 0 7080000 7080000 0 0 0 0 + 421 581 455 705;706 1140;1141 1141 2 DQTDFEHR MRKRALVFQPVAELKDQTDFEHRIPKEQWW QPVAELKDQTDFEHRIPKEQWWLKLRPILK K D Q H R I 0 1 0 2 0 1 1 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 8 0 1046.4417 A0A0S2Z4A8;Q7KYX9;B4E162;Q96I60;A0A0S2Z4I1;A0A024R0Y5;P08237;Q7Z683;A0A0S2Z4A1 A0A0S2Z4A8 343 350 PFKM;DKFZp779O048 ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, muscle type yes no 2 0.0087714 55.531 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 10986000 0 10986000 0 0 0 10986000 0 10986000 422 23 456 707 1142 1142 1 DQVNLSPK HIPENVQHNACQWSKDQVNLSPKLIQPGTF NACQWSKDQVNLSPKLIQPGTFTKTKEDIL K D Q P K L 0 0 1 1 0 1 0 0 0 0 1 1 0 0 1 1 0 0 0 1 0 0 8 0 899.47125 B5BUA4;Q5FBB7 B5BUA4 251 258 SGOL1 Shugoshin-like 1 yes no 2 0.0031976 62.166 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 423 529 457 708 1143 1143 768 0 DQVTAQEIFQDNHEDGPTAK SKIKTLFPLIEAKKKDQVTAQEIFQDNHED QEIFQDNHEDGPTAKKLKTEQGGAHFSVSS K D Q A K K 2 0 1 3 0 3 2 1 1 1 0 1 0 1 1 0 2 0 0 1 0 0 20 0 2242.0138 Q53T09;P13010 Q53T09 382 401 XRCC5 X-ray repair cross-complementing protein 5 yes no 3 3.8014E-15 73.294 1 1 0.54921 0.69145 16.495 2 Median 0.51331 0.61532 NaN 1 0 Median 0.58762 0.77699 NaN 1 0 Median 22929000 13388000 9541800 9697600 5929500 3768100 13232000 7458100 5773700 424 735 458 709;710 1144;1145;1146;1147 1145 3 DQVVILHHMLSK ERQRSLFVVVGDRGKDQVVILHHMLSKATV RGKDQVVILHHMLSKATVKARPSVLWCYKK K D Q S K A 0 0 0 1 0 1 0 0 2 1 2 1 1 0 0 1 0 0 0 2 0 0 12 0 1418.7704 Q9H0A0;E9PMU0;E9PJN6;Q05CW7 Q9H0A0 35 46 NAT10 N-acetyltransferase 10 no no 3 0.00092098 62.162 1 0.50829 0.63557 NaN 1 Median NaN NaN NaN 0 0 Median 0.50829 0.63557 NaN 1 0 Median 38529000 25541000 12987000 0 0 0 38529000 25541000 12987000 425 924;801 459 711 1148 1148 191 1 DRDYSDHPSGGSYR DYPSRGYSDRDGYGRDRDYSDHPSGGSYRD RDRDYSDHPSGGSYRDSYESYGNSRSAPPT R D R Y R D 0 2 0 3 0 0 0 2 1 0 0 0 0 0 1 3 0 0 2 0 0 0 14 1 1610.671 B4E352;P38159;H0Y6E7;H3BT71;Q2VIN3;Q96E39;B3KRG5;H3BUY5 B4E352 230 243 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 yes no 3 0.013712 27.335 1 0.83722 1.0897 NaN 1 Median 0.83722 1.0897 NaN 1 0 Median NaN NaN NaN 0 0 Median 27829000 14915000 12915000 27829000 14915000 12915000 0 0 0 426 522 460 712 1149;1150 1150 2 DREEALHQFR EGYACTSIHGDRSQRDREEALHQFRSGKSP DRSQRDREEALHQFRSGKSPILVATAVAAR R D R F R S 1 2 0 1 0 1 2 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 10 1 1299.632 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;A0A024R9A4;O15523;B4E132 A0A0D9SFB3 479 488 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 3 0.02369 23.749 1 0.47672 0.61758 NaN 1 Median 0.47672 0.61758 NaN 1 0 Median NaN NaN NaN 0 0 Median 16252000 10913000 5338800 16252000 10913000 5338800 0 0 0 427 249 461 713 1151 1151 0 DRIIDAGPK QEHDITNFYMLTLDKDRIIDAGPKGNYARF MLTLDKDRIIDAGPKGNYARFMNHCCQPNC K D R P K G 1 1 0 2 0 0 0 1 0 2 0 1 0 0 1 0 0 0 0 0 0 0 9 1 983.53999 B2RWP5;Q96L73;Q658U6;Q9H6B5;A0A1D8GZ55;A0A1D8GZ56;Q9H6H8;Q96DQ7;O96028;Q9BZ95 B2RWP5 1735 1743 NSD1;DKFZp666C163;WHSC1;WHSC1L1 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific;Histone-lysine N-methyltransferase NSD2;Histone-lysine N-methyltransferase NSD3 no no 2 0.021076 46.819 1 0.8018 1.0841 NaN 1 Median NaN NaN NaN 0 0 Median 0.8018 1.0841 NaN 1 0 Median 11123000 5536100 5587000 0 0 0 11123000 5536100 5587000 428 422;724;923 462 714 1152 1152 1 DRPSLTVTPK PVRRRRRCPGGRVPKDRPSLTVTPKRWKLR GRVPKDRPSLTVTPKRWKLRARPSLTVTPR K D R P K R 0 1 0 1 0 0 0 0 0 0 1 1 0 0 2 1 2 0 0 1 0 0 10 1 1112.619 A0PJ70;A8K9K0;Q8TF76 A0PJ70 90 99 GSG2 Serine/threonine-protein kinase haspin yes no 2 0.013865 45.433 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 429 299 463 715 1153 1153 1832 0 DRSEEEFER VKYDIGRKLWIYLHRDRSEEEFERIHQAQA WIYLHRDRSEEEFERIHQAQAAAAKARKAL R D R E R I 0 2 0 1 0 0 4 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 9 1 1195.5105 A0A024R3K9;A0A024R3N2;Q6P4R8;E9PQ59;B4DSL1 A0A024R3K9 653 661 NFRKB Nuclear factor related to kappa-B-binding protein yes no 2 0.018453 55.806 1 0.78438 1.2421 NaN 1 Median NaN NaN NaN 0 0 Median 0.78438 1.2421 NaN 1 0 Median 13352000 7333700 6018800 0 0 0 13352000 7333700 6018800 430 53 464 716 1154;1155 1154 2 DRTTSFFLNSPEK KKCAVPVETEWLKSKDRTTSFFLNSPEKEH SKDRTTSFFLNSPEKEHQEMDEGSQSLEKL K D R E K E 0 1 1 1 0 0 1 0 0 0 1 1 0 2 1 2 2 0 0 0 0 0 13 1 1540.7522 Q8WYP5;B3KTD2;B3KVE5 Q8WYP5 1274 1286 AHCTF1 Protein ELYS yes no 2;3 0 275.5 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 431 897 465 717;718;719 1156;1157;1158;1159;1160;1161 1159 1519 0 DRVLDDVSIRSPETK RMSDPSHTTNKLYPKDRVLDDVSIRSPETK DRVLDDVSIRSPETKCPKQNSIENDIEEKV K D R T K C 0 2 0 3 0 0 1 0 0 1 1 1 0 0 1 2 1 0 0 2 0 0 15 2 1728.9006 F5GXF5;E7ETD6;Q12830 F5GXF5 1227 1241 BPTF Nucleosome-remodeling factor subunit BPTF yes no 3 2.3976E-05 62.765 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 432 607 466 720;721 1162;1163;1164;1165 1163 906;907 0 DRVVNLAVDK ILSCRKAGSIMREGRDRVVNLAVDKTGRIL MREGRDRVVNLAVDKTGRILACHGTDSVLE R D R D K T 1 1 1 2 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 3 0 0 10 1 1127.6299 Q5TDG3;Q9UNX4 Q5TDG3 280 289 WDR3 WD repeat-containing protein 3 yes no 2 0.014135 47.559 1 0.59669 0.80251 NaN 1 Median NaN NaN NaN 0 0 Median 0.59669 0.80251 NaN 1 0 Median 10626000 6169200 4456600 0 0 0 10626000 6169200 4456600 433 848 467 722 1166 1166 1 DSAAFEDNEVQDEFLEK DVQEESEGSDTDDNKDSAAFEDNEVQDEFL AAFEDNEVQDEFLEKLETSEFFELTSEEKL K D S E K L 2 0 1 3 0 1 4 0 0 0 1 1 0 2 0 1 0 0 0 1 0 0 17 0 1984.8538 Q9UIG0 Q9UIG0 715 731 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 2 0.025605 25.178 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 9246700 0 9246700 0 0 0 9246700 0 9246700 434 952 468 723 1167 1167 1 DSAYISSSPLGSHQVFDFR GLPVIQSPPSSPPHRDSAYISSSPLGSHQV ISSSPLGSHQVFDFRSSSSVGSPTRQTYQS R D S F R S 1 1 0 2 0 1 0 1 1 1 1 0 0 2 1 5 0 0 1 1 0 0 19 0 2111.9912 Q9HCD6;A0A087WUE1 Q9HCD6 1451 1469 TANC2 Protein TANC2 yes no 3 0.029855 15.09 1 0.55157 0.68352 NaN 1 Median 0.55157 0.68352 NaN 1 0 Median NaN NaN NaN 0 0 Median 46866000 32800000 14066000 46866000 32800000 14066000 0 0 0 435 931 469 724 1168 1168 1 DSAYQSITHYRPVSASR SEEECKDRERPMYGRDSAYQSITHYRPVSA AYQSITHYRPVSASRSSLDLSYYPTSSSTS R D S S R S 2 2 0 1 0 1 0 0 1 1 0 0 0 0 1 4 1 0 2 1 0 0 17 1 1936.9391 P50402;Q5HY57 P50402 158 174 EMD Emerin yes no 3 2.0982E-07 66.874 1 1 0.90161 1.3861 NaN 1 Median NaN NaN NaN 0 0 Median 0.90161 1.3861 NaN 1 0 Median 11328000 5548400 5779100 0 0 0 11328000 5548400 5779100 436 771 470;471 725;726 1169;1170;1171;1172;1173 1170 1250;1251 3 DSDYVYPSLESDEDNPIFK DDYEEEQDHLDACFKDSDYVYPSLESDEDN VYPSLESDEDNPIFKSRSKKRKGSDDAPYS K D S F K S 0 0 1 4 0 0 2 0 0 1 1 1 0 1 2 3 0 0 2 1 0 0 19 0 2231.9746 O75151;E7ET14;A0A087WW48;Q6P2C5;Q8N359;B4DH04 O75151 872 890 PHF2 Lysine-specific demethylase PHF2 yes no 2 4.4233E-11 82.59 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 437 708 472;473 727;728 1174;1175;1176 1175 1055;1056 0 DSEADRFSDSHNALR FSTLAGLVFEWTIVKDSEADRFSDSHNALR DSEADRFSDSHNALRILTFLESTYIPPSYI K D S L R I 2 2 1 3 0 0 1 0 1 0 1 0 0 1 0 3 0 0 0 0 0 0 15 1 1718.7608 Q8TEM1 Q8TEM1 164 178 NUP210 Nuclear pore membrane glycoprotein 210 yes yes 3 0.0024531 40.237 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1896300 1896300 0 1896300 1896300 0 0 0 0 438 892 474 729 1177 1177 1 DSEEAEIIRK VNYEKLKTDIKVVDRDSEEAEIIRKYVKNT KVVDRDSEEAEIIRKYVKNTHATTHNAYDL R D S R K Y 1 1 0 1 0 0 3 0 0 2 0 1 0 0 0 1 0 0 0 0 0 0 10 1 1188.5986 A0A024R3T8;P09874;B2R5W3 A0A024R3T8 807 816 PARP1 Poly [ADP-ribose] polymerase 1 yes no 2 3.2173E-34 118.18 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 7119400 7119400 0 0 0 0 7119400 7119400 0 439 56 475 730 1178 1178 1 DSENLASPSEYPENGER LKNLNNSNLFSPVNRDSENLASPSEYPENG ENLASPSEYPENGERFSFLSKPVDENHQQD R D S E R F 1 1 2 1 0 0 4 1 0 0 1 0 0 0 2 3 0 0 1 0 0 0 17 0 1892.8024 Q86TI1;B4DWF8;A8KA17;A0A024RCC4;P52948 Q86TI1 130 146 NUP98/HOXC13;NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes no 2 0.0058325 40.349 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 440 155 476 731 1179 1179 214 0 DSFFLDLSCEK SEGGWFIDKTPSVKKDSFFLDLSCEKSNPK SVKKDSFFLDLSCEKSNPKKPITEIQDSKD K D S E K S 0 0 0 2 1 0 1 0 0 0 2 1 0 2 0 2 0 0 0 0 0 0 11 0 1359.6017 C9JP83;C9J6P7;A0JLP9;E9PH71;B4DQJ4;B4DLM8;O15381 C9JP83 80 90 NVL Nuclear valosin-containing protein-like yes no 2 2.5831E-29 126.1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 441 293 477 732 1180 1180 439 0 DSGSDLSHRPK NVSHDESIAKDMSLKDSGSDLSHRPKRRRF MSLKDSGSDLSHRPKRRRFHESYNFNMKCP K D S P K R 0 1 0 2 0 0 0 1 1 0 1 1 0 0 1 3 0 0 0 0 0 0 11 1 1197.5738 O95251;E7EUP3;B7Z4D9;B3KVJ2;D6RFZ5 O95251 161 171 KAT7 Histone acetyltransferase KAT7;Histone acetyltransferase yes no 3 0.022907 34.501 1 0.61374 0.79554 NaN 1 Median NaN NaN NaN 0 0 Median 0.61374 0.79554 NaN 1 0 Median 6504100 3461900 3042200 0 0 0 6504100 3461900 3042200 442 718 478 733 1181 1181 1 DSGSQEVLSELR ELSQDAEPAGSQETKDSGSQEVLSELRVLS ETKDSGSQEVLSELRVLSQKLKENHQSRKQ K D S L R V 0 1 0 1 0 1 2 1 0 0 2 0 0 0 0 3 0 0 0 1 0 0 12 0 1318.6365 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 450 461 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes no 2 2.7334E-227 191.48 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 443 919 479 734;735;736 1182;1183;1184;1185;1186 1184 1592 0 DSHGVAQVR SDSPASASRIGVILRDSHGVAQVRFVTGNK IGVILRDSHGVAQVRFVTGNKILRILKSKG R D S V R F 1 1 0 1 0 1 0 1 1 0 0 0 0 0 0 1 0 0 0 2 0 0 9 0 967.48354 E9PS50;J3KMX5;P62277 E9PS50 91 99 RPS13 40S ribosomal protein S13 yes no 2 0.0013013 69.423 1 0.7509 0.96326 NaN 1 Median NaN NaN NaN 0 0 Median 0.7509 0.96326 NaN 1 0 Median 15615000 8601400 7013100 0 0 0 15615000 8601400 7013100 444 629 480 737 1187;1188 1187 2 DSITPDIATKPGQPLFLDSISPKK NVRRHFDEVHRGLRRDSITPDIATKPGQPL KPGQPLFLDSISPKKSFKTRKQKSSSKAEY R D S K K S 1 0 0 3 0 1 0 1 0 3 2 3 0 1 4 3 2 0 0 0 0 0 24 2 2567.3847 B7Z4V7;Q2TB10;Q49A13 B7Z4V7 219 242 ZNF800 Zinc finger protein 800 yes no 3 2.6304E-27 95.302 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 445 539 481 738 1189 1189 776;777;778 0 DSLIDSLT KLNEAQPSTIATSMRDSLIDSLT_______ TIATSMRDSLIDSLT_______________ R D S L T - 0 0 0 2 0 0 0 0 0 1 2 0 0 0 0 2 1 0 0 0 0 0 8 0 862.42838 P56537 P56537 238 245 EIF6 Eukaryotic translation initiation factor 6 yes yes 1 7.0721E-51 133.58 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 5404300 0 0 5404300 0 0 0 0 0 446 781 482;483 739;740 1190;1191 1191 1263 1 DSLYAQGKR GKHQPHKVTQYKKGKDSLYAQGKRRYDRKQ QYKKGKDSLYAQGKRRYDRKQSGYGGQTKP K D S K R R 1 1 0 1 0 1 0 1 0 0 1 1 0 0 0 1 0 0 1 0 0 0 9 1 1036.5302 H0Y5B4;H7BZ11;J3KQN4;P83881;H7BY91;H0Y3V9 H0Y5B4 31 39 RPL36A;RPL36A-HNRNPH2 60S ribosomal protein L36a yes no 2 0.0049356 62.464 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1669200 1669200 0 0 0 0 1669200 1669200 0 447 650 484 741 1192 1192 1 DSLYAQGR GKHQPHKVTQYKKGKDSLYAQGRRRYDRKQ TQYKKGKDSLYAQGRRRYDRKQSVYGGQTK K D S G R R 1 1 0 1 0 1 0 1 0 0 1 0 0 0 0 1 0 0 1 0 0 0 8 0 908.43519 B2R4V2;Q969Q0 B2R4V2 31 38 RPL36AL 60S ribosomal protein L36a-like yes no 2 0.0065034 71.852 1 1.2064 1.5667 NaN 1 Median NaN NaN NaN 0 0 Median 1.2064 1.5667 NaN 1 0 Median 22438000 11176000 11262000 0 0 0 22438000 11176000 11262000 448 401 485 742 1193 1193 1 DSLYKPILR GQLRLAHGVRLKANKDSLYKPILRQKKHFN RLKANKDSLYKPILRQKKHFNSLHIPKALQ K D S L R Q 0 1 0 1 0 0 0 0 0 1 2 1 0 0 1 1 0 0 1 0 0 0 9 1 1103.6339 Q14692 Q14692 1148 1156 BMS1 Ribosome biogenesis protein BMS1 homolog yes yes 2 0.0069814 63.565 1 0.71489 0.99385 NaN 1 Median NaN NaN NaN 0 0 Median 0.71489 0.99385 NaN 1 0 Median 13993000 7754800 6238200 0 0 0 13993000 7754800 6238200 449 817 486 743 1194;1195 1195 2 DSNAPKSPLTGYVR RGGWSKGRKRKKPLRDSNAPKSPLTGYVRF RDSNAPKSPLTGYVRFMNERREQLRAKRPE R D S V R F 1 1 1 1 0 0 0 1 0 0 1 1 0 0 2 2 1 0 1 1 0 0 14 1 1503.7682 H0YNS8;H0YKM5;Q9NP66 H0YNS8 99 112 HMG20A High mobility group protein 20A yes no 2;3 4.7959E-05 88.78 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 450 657 487 744;745 1196;1197;1198;1199;1200 1199 983 0 DSPAFPDSPWR SASKLRIAQVSPGPRDSPAFPDSPWRERVL PGPRDSPAFPDSPWRERVLAPILPDNFSTP R D S W R E 1 1 0 2 0 0 0 0 0 0 0 0 0 1 3 2 0 1 0 0 0 0 11 0 1273.5728 Q9NQS7;B3KPD3 Q9NQS7 268 278 INCENP Inner centromere protein yes no 2 0.0033212 60.628 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 451 932 488 746 1201 1201 1631;1632 0 DSPAFPDSPWRER SASKLRIAQVSPGPRDSPAFPDSPWRERVL PRDSPAFPDSPWRERVLAPILPDNFSTPTG R D S E R V 1 2 0 2 0 0 1 0 0 0 0 0 0 1 3 2 0 1 0 0 0 0 13 1 1558.7165 Q9NQS7;B3KPD3 Q9NQS7 268 280 INCENP Inner centromere protein yes no 2 0.02333 53.001 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 452 932 489 747 1202 1202 1631;1632 0 DSSFTEVPRSPK SPAAESSSTFSFSGRDSSFTEVPRSPKHAH SGRDSSFTEVPRSPKHAHSSSLQQAASRSP R D S P K H 0 1 0 1 0 0 1 0 0 0 0 1 0 1 2 3 1 0 0 1 0 0 12 1 1348.6623 O95425 O95425 236 247 SVIL Supervillin yes yes 2 0 236.05 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 453 719 490;491 748;749;750;751 1203;1204;1205;1206;1207;1208;1209 1207 1096;1097 0 DSSGQEDETQSSNDDPSQSVASQDAQEIIRPR DNSGCSGENKEENIKDSSGQEDETQSSNDD QSVASQDAQEIIRPRRCKYFDTNSEVEEES K D S P R R 2 2 1 5 0 5 3 1 0 2 0 0 0 0 2 7 1 0 0 1 0 0 32 1 3475.5207 Q8N108 Q8N108 120 151 MIER1 Mesoderm induction early response protein 1 yes yes 3 5.6756E-25 58.672 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 454 878 492 752 1210 1210 1473 0 DSVAQGTTNVHSSEHAGR HIKNVKEDSTADDSKDSVAQGTTNVHSSEH AQGTTNVHSSEHAGRNGRNAADPISGDFKE K D S G R N 2 1 1 1 0 1 1 2 2 0 0 0 0 0 0 3 2 0 0 2 0 0 18 0 1851.846 P46013 P46013 173 190 MKI67 Antigen KI-67 yes yes 3 1.4792E-31 114.96 1 1 1.0337 1.3496 2.5714 2 Median 1.0692 1.3252 NaN 1 0 Median 0.99948 1.3743 NaN 1 0 Median 95169000 49594000 45575000 46223000 23355000 22868000 48946000 26239000 22706000 455 762 493 753;754 1211;1212;1213;1214 1214 4 DSYESYGNSR RDRDYSDHPSGGSYRDSYESYGNSRSAPPT GGSYRDSYESYGNSRSAPPTRGPPPSYGGS R D S S R S 0 1 1 1 0 0 1 1 0 0 0 0 0 0 0 3 0 0 2 0 0 0 10 0 1176.4683 B4E352;P38159;Q2VIN3;Q96E39;B3KRG5;H3BUY5 B4E352 244 253 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 yes no 2 0.020593 44.203 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1949500 1949500 0 0 0 0 1949500 1949500 0 456 522 494 755 1215 1215 1 DSYVGDEAQSKR GRPRHQGVMVGMGQKDSYVGDEAQSKRGIL GQKDSYVGDEAQSKRGILTLKYPIEHGIVT K D S K R G 1 1 0 2 0 1 1 1 0 0 0 1 0 0 0 2 0 0 1 1 0 0 12 1 1353.6161 P63261;B4E3A4;Q8WVW5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4DVQ0;B4E335;I3L3I0;I3L1U9;B3KUD3;B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B4DUI8;B3KW67;A8K3K1;Q7Z7J6;A6NL76;K7EM38;I3L3R2;J3KT65;A1E282;G5E9R0;E7EVS6;C9JTX5;C9JUM1;C9JZR7;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1 P63261 51 62 ACTG1;PS1TP5BP1;ACTB;ACTA2;ACTG2;ACTA1;ACTC1 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle yes no 2;3 1.6296E-20 117.52 2 2.5556 4.0101 NaN 1 Median NaN NaN NaN 0 0 Median 2.5556 4.0101 NaN 1 0 Median 87000000 23890000 63110000 0 0 0 87000000 23890000 63110000 457 794 495 756;757 1216;1217 1216 2 DTEGGPKEEESPV KPNEVTKAAESPDQKDTEGGPKEEESPV__ QKDTEGGPKEEESPV_______________ K D T P V - 0 0 0 1 0 0 4 2 0 0 0 1 0 0 2 1 1 0 0 1 0 0 13 1 1372.5994 B4E106 B4E106 468 480 yes yes 2 0.0028336 47.621 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 458 517 496 758 1218 1218 751 0 DTEQYEREDFLIK TVYGSNDQDPYVTLKDTEQYEREDFLIKPS LKDTEQYEREDFLIKPSDNLIVCGRAEQDQ K D T I K P 0 1 0 2 0 1 3 0 0 1 1 1 0 1 0 0 1 0 1 0 0 0 13 1 1684.7944 B4DJV5;Q9BV37;Q53FW9;A0A024RBH5;Q13610;F8VZ56;Q86X79;Q05BL3;Q6PKI5;Q6PIN4 B4DJV5 72 84 PWP1 Periodic tryptophan protein 1 homolog yes no 2;3 0.0042504 49.5 2 0.54412 0.79333 12.249 2 Median NaN NaN NaN 0 0 Median 0.54412 0.79333 12.249 2 0 Median 44561000 27919000 16642000 0 0 0 44561000 27919000 16642000 459 144 497 759;760 1219;1220;1221 1220 3 DTFEHDPSESIDEFNK QEESPLKSKSQEEPKDTFEHDPSESIDEFN TFEHDPSESIDEFNKSSATSGDIWPGLSAY K D T N K S 0 0 1 3 0 0 3 0 1 1 0 1 0 2 1 2 1 0 0 0 0 0 16 0 1908.8014 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09;E9PJA7 Q6DCA8 189 204 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.0013358 32.746 1 0.59781 0.79306 NaN 1 Median NaN NaN NaN 0 0 Median 0.59781 0.79306 NaN 1 0 Median 5910700 3340300 2570300 0 0 0 5910700 3340300 2570300 460 622 498 761 1222;1223 1223 2 DTIIDVVGAPLTPNSR AEPAVTEPGLGPDPKDTIIDVVGAPLTPNS TIIDVVGAPLTPNSRKRRESASSSSSVKKA K D T S R K 1 1 1 2 0 0 0 1 0 2 1 0 0 0 2 1 2 0 0 2 0 0 16 0 1666.889 B4DQG8;Q9NPF5 B4DQG8 424 439 DMAP1 DNA methyltransferase 1-associated protein 1 yes no 2 3.23E-12 101.42 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 461 490 499 762 1224;1225;1226 1226 1885 0 DTLFCYHK GCPLPEACELYYVNRDTLFCYHKASEVFLQ ELYYVNRDTLFCYHKASEVFLQRLMALYVA R D T H K A 0 0 0 1 1 0 0 0 1 0 1 1 0 1 0 0 1 0 1 0 0 0 8 0 1082.4855 Q9H0A0;A0A087WV29;Q05CW7 Q9H0A0 513 520 NAT10 N-acetyltransferase 10 no no 2 0.016834 57.559 1 0.87866 1.0715 NaN 1 Median 0.87866 1.0715 NaN 1 0 Median NaN NaN NaN 0 0 Median 5751600 2778400 2973200 5751600 2778400 2973200 0 0 0 462 924;801 500 763 1227 1227 1 DTLLSPDSSFEYVPPK LTLLQVASRQKHLPKDTLLSPDSSFEYVPP TLLSPDSSFEYVPPKPKPSRVKEKFLEQSM K D T P K P 0 0 0 2 0 0 1 0 0 0 2 1 0 1 3 3 1 0 1 1 0 0 16 0 1793.8723 Q59HG1;O95239;B3KNC0 Q59HG1 1012 1027 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A yes no 2 1.8993E-11 99.055 3 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 463 717 501;502;503 764;765;766;767 1228;1229;1230;1231;1232;1233;1234;1235;1236;1237;1238 1237 1081;1082;1083 0 DTLLSPDSSFEYVPPKPK LTLLQVASRQKHLPKDTLLSPDSSFEYVPP LSPDSSFEYVPPKPKPSRVKEKFLEQSMDI K D T P K P 0 0 0 2 0 0 1 0 0 0 2 2 0 1 4 3 1 0 1 1 0 0 18 1 2019.0201 Q59HG1;O95239;B3KNC0 Q59HG1 1012 1029 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A yes no 2;3 9.6029E-159 180.78 4 4 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 464 717 504;505;506 768;769;770;771;772;773;774;775 1239;1240;1241;1242;1243;1244;1245;1246;1247;1248;1249;1250;1251;1252;1253;1254;1255;1256;1257 1243 1081;1082;1083 0 DTLQTVSSSPVTEISR IDQQNSVSPDTPVRKDTLQTVSSSPVTEIS TLQTVSSSPVTEISREVVNIVLAKSKSSQM K D T S R E 0 1 0 1 0 1 1 0 0 1 1 0 0 0 1 4 3 0 0 2 0 0 16 0 1718.8687 Q5T3J3 Q5T3J3 394 409 LRIF1 Ligand-dependent nuclear receptor-interacting factor 1 yes yes 2 2.2126E-150 176.04 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 465 845 507 776;777 1258;1259;1260 1259 1397;1398 0 DTLVADNLDQATR VKDEKIRQAFYFALRDTLVADNLDQATRVA LRDTLVADNLDQATRVAYQKDRRWRVVTLQ R D T T R V 2 1 1 3 0 1 0 0 0 0 2 0 0 0 0 0 2 0 0 1 0 0 13 0 1430.7001 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 714 726 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 2 2.4948E-09 121.9 1 1 0.65642 0.83799 1.2168 2 Median 0.66804 0.84523 NaN 1 0 Median 0.64501 0.83081 NaN 1 0 Median 19723000 10141000 9582000 4822600 1964700 2857900 14900000 8176400 6724100 466 941 508 778;779 1261;1262 1261 2 DTSATTALELVAGER RNCVKGLVASLISVKDTSATTALELVAGER DTSATTALELVAGERLYNVVVDTEVTGKKL K D T E R L 3 1 0 1 0 0 2 1 0 0 2 0 0 0 0 1 3 0 0 1 0 0 15 0 1532.7682 B7ZLZ7;A0A024R158;O95347;A8K984;B3KMB1;Q2KQ72;Q05BV1 B7ZLZ7 534 548 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 yes no 2 1.3427E-05 54.7 1 1 0.57483 0.74426 NaN 1 Median NaN NaN NaN 0 0 Median 0.57483 0.74426 NaN 1 0 Median 23861000 14916000 8944800 2526400 2526400 0 21334000 12389000 8944800 467 27 509 780;781 1263;1264;1265 1263 3 DTYDTSIDSLEENLDK KLEGEDGDVKCLSEKDTYDTSIDSLEENLD TYDTSIDSLEENLDKKKKGKKFPEASDRCL K D T D K K 0 0 1 4 0 0 2 0 0 1 2 1 0 0 0 2 2 0 1 0 0 0 16 0 1856.8163 A0A1B0GUH9;A0PJI9;A0A1P0AZG4 A0A1B0GUH9 759 774 C10orf12 yes no 2 8.3567E-60 141.85 3 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 468 286 510;511 782;783;784;785;786;787 1266;1267;1268;1269;1270;1271;1272;1273 1267 427;428;1830 0 DTYDTSIDSLEENLDKK KLEGEDGDVKCLSEKDTYDTSIDSLEENLD YDTSIDSLEENLDKKKKGKKFPEASDRCLR K D T K K K 0 0 1 4 0 0 2 0 0 1 2 2 0 0 0 2 2 0 1 0 0 0 17 1 1984.9113 A0A1B0GUH9;A0PJI9;A0A1P0AZG4 A0A1B0GUH9 759 775 C10orf12 yes no 2 5.2861E-11 92.773 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 469 286 512 788 1274;1275 1275 427;428;1830 0 DVDEAHYAYSFK ERAKLNITPTKKGRKDVDEAHYAYSFKYLK GRKDVDEAHYAYSFKYLKNKPVKELRDDQF K D V F K Y 2 0 0 2 0 0 1 0 1 0 0 1 0 1 0 1 0 0 2 1 0 0 12 0 1443.6307 Q7KZ85 Q7KZ85 627 638 SUPT6H Transcription elongation factor SPT6 yes yes 2 0.0037869 60.691 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3360200 0 3360200 0 0 0 3360200 0 3360200 470 866 513 789 1276 1276 1 DVDIIDHHDNTYTVK LDVQFSGLTKGDAVRDVDIIDHHDNTYTVK DVDIIDHHDNTYTVKYTPVQQGPVGVNVTY R D V V K Y 0 0 1 4 0 0 0 0 2 2 0 1 0 0 0 0 2 0 1 2 0 0 15 0 1783.8377 Q5HY54;Q60FE6;Q60FE5;P21333;A6NDY9;A0A087WWY3 Q5HY54 922 936 FLNA Filamin-A yes no 3 0.000271 54.812 1 1 1.567 1.9587 77.511 2 Median 0.9143 1.1322 NaN 1 0 Median 2.6857 3.3885 NaN 1 0 Median 21564000 10355000 11209000 13213000 7928100 5285300 8350300 2427000 5923300 471 746 514 790;791 1277;1278;1279 1279 3 DVDVVCVDMSIEQK VDKENINNTPKHFRKDVDVVCVDMSIEQKL KDVDVVCVDMSIEQKLPRKPKTDKFQVLAK K D V Q K L 0 0 0 3 1 1 1 0 0 1 0 1 1 0 0 1 0 0 0 4 0 0 14 0 1635.7484 B4DZG2;A0A024R8C1;Q15361 B4DZG2 122 135 TTF1 Transcription termination factor 1 yes no 2 0.003981 40.278 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 472 103 515 792 1280 1280 21 145 0 DVESPSWR FTWLVGKINRSLASKDVESPSWRSTTVLGL NRSLASKDVESPSWRSTTVLGLLDIYGFEV K D V W R S 0 1 0 1 0 0 1 0 0 0 0 0 0 0 1 2 0 1 0 1 0 0 8 0 974.44576 B7Z9C0;D3DTH7;F5H6E2;B7Z3E5;O00159 B7Z9C0 370 377 MYO1C Unconventional myosin-Ic yes no 2 0.00013325 91.584 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 473 538 516 793 1281;1282 1282 775 0 DVESYIHR DIPEVDLVIQSSPPKDVESYIHRSGRTGRA IQSSPPKDVESYIHRSGRTGRAGRTGVCIC K D V H R S 0 1 0 1 0 0 1 0 1 1 0 0 0 0 0 1 0 0 1 1 0 0 8 0 1017.488 Q9NR30 Q9NR30 517 524 DDX21 Nucleolar RNA helicase 2 yes yes 2 0.00018481 94.262 1 1 0.54771 0.73754 1.8977 2 Median 0.5701 0.72771 NaN 1 0 Median 0.52619 0.7475 NaN 1 0 Median 136330000 87560000 48773000 6828600 4162100 2666600 129500000 83398000 46106000 474 934 517 794;795 1283;1284;1285;1286;1287 1284 5 DVFASEVTPSDLQK LTTNVTEQTEKDGDKDVFASEVTPSDLQKQ KDVFASEVTPSDLQKQMGNLEDAETKDLLV K D V Q K Q 1 0 0 2 0 1 1 0 0 0 1 1 0 1 1 2 1 0 0 2 0 0 14 0 1534.7515 Q8WYP5;B3KTD2;B3KVE5 Q8WYP5 1362 1375 AHCTF1 Protein ELYS yes no 2 0 218.6 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 475 897 518 796;797 1288;1289;1290;1291 1288 1520;2027 0 DVFRDPALK RYSVDIPLDKTVVNKDVFRDPALKRKLKKK KTVVNKDVFRDPALKRKLKKKSAYGLSLKN K D V L K R 1 1 0 2 0 0 0 0 0 0 1 1 0 1 1 0 0 0 0 1 0 0 9 1 1059.5713 E4W6B6;B2R4D8;A0A024R1V4;K7ELC7;P61353;K7EQQ9;Q6LCU2 E4W6B6 99 107 RPL27 60S ribosomal protein L27 yes no 2 0.0013907 74.92 1 1 0.62204 0.87912 5.5764 2 Median 0.72212 0.91448 NaN 1 0 Median 0.53583 0.84513 NaN 1 0 Median 114620000 72231000 42391000 5856100 3211600 2644500 108770000 69019000 39747000 476 37 519 798;799 1292;1293;1294;1295 1295 4 DVFRDPALKR RYSVDIPLDKTVVNKDVFRDPALKRKLKKK TVVNKDVFRDPALKRKLKKKSAYGLSLKNW K D V K R K 1 2 0 2 0 0 0 0 0 0 1 1 0 1 1 0 0 0 0 1 0 0 10 2 1215.6724 E4W6B6;B2R4D8;A0A024R1V4;K7ELC7;P61353;K7EQQ9;Q6LCU2 E4W6B6 99 108 RPL27 60S ribosomal protein L27 yes no 3 0.00022099 67.153 1 0.42597 0.59336 NaN 1 Median NaN NaN NaN 0 0 Median 0.42597 0.59336 NaN 1 0 Median 47866000 31858000 16008000 0 0 0 47866000 31858000 16008000 477 37 520 800 1296;1297;1298 1296 3 DVFYYSPSGK REEVPRRSGLSAGHRDVFYYSPSGKKFRSK SAGHRDVFYYSPSGKKFRSKPQLARYLGGS R D V G K K 0 0 0 1 0 0 0 1 0 0 0 1 0 1 1 2 0 0 2 1 0 0 10 0 1161.5342 O95983 O95983 32 41 MBD3 Methyl-CpG-binding domain protein 3 yes yes 2 0.0030916 57.836 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 478 723 521 801 1299;1300 1299 1108 0 DVFYYSPSGKK REEVPRRSGLSAGHRDVFYYSPSGKKFRSK AGHRDVFYYSPSGKKFRSKPQLARYLGGSM R D V K K F 0 0 0 1 0 0 0 1 0 0 0 2 0 1 1 2 0 0 2 1 0 0 11 1 1289.6292 O95983 O95983 32 42 MBD3 Methyl-CpG-binding domain protein 3 yes yes 2 0.0022608 46.88 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 479 723 522 802 1301 1301 1108 0 DVHTLLDR DHLERVLEAAAQAARDVHTLLDRVVRQHVR AAAQAARDVHTLLDRVVRQHVRE_______ R D V D R V 0 1 0 2 0 0 0 0 1 0 2 0 0 0 0 0 1 0 0 1 0 0 8 0 967.50869 E9PI41;Q9NPD3 E9PI41 246 253 EXOSC4 Exosome complex component RRP41 yes no 2 0.025278 47.082 1 0.39398 0.52731 NaN 1 Median NaN NaN NaN 0 0 Median 0.39398 0.52731 NaN 1 0 Median 9806000 7121100 2684900 0 0 0 9806000 7121100 2684900 480 618 523 803 1302 1302 1 DVLSVAFSSDNR LTTGTTTRRFVGHTKDVLSVAFSSDNRQIV HTKDVLSVAFSSDNRQIVSGSRDKTIKLWN K D V N R Q 1 1 1 2 0 0 0 0 0 0 1 0 0 1 0 3 0 0 0 2 0 0 12 0 1308.631 E9KL35;P63244;D6RFX4;D6RFZ9;H0YAF8;B4DVD2;D6RHH4;D6R9Z1;H0YAM7;J3KPE3;H0Y8W2;D6R9L0;D6RAU2;E9PD14 E9KL35 107 118 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 2 6.3561E-06 98.249 1 1 0.83173 1.0493 NaN 1 Median 0.83173 1.0493 NaN 1 0 Median NaN NaN NaN 0 0 Median 8089300 6195200 1894000 4135500 2241500 1894000 3953800 3953800 0 481 610 524 804;805 1303;1304;1305 1304 3 DVPPDILLDSPERK PLILQSQSLPCSSPRDVPPDILLDSPERKQ RDVPPDILLDSPERKQKKQKKMKLGKDEKE R D V R K Q 0 1 0 3 0 0 1 0 0 1 2 1 0 0 3 1 0 0 0 1 0 0 14 1 1592.841 Q6IEH8;Q6KC79;A8K2T2;A6QL62 Q6IEH8 309 322 NIPBL Nipped-B-like protein yes no 2 0.0017885 40.751 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 482 856 525 806 1306 1306 1413 0 DVPPLSETEATPVPIK KDGVLTLANNVTPAKDVPPLSETEATPVPI VPPLSETEATPVPIKDMEIAQTQKGISEDS K D V I K D 1 0 0 1 0 0 2 0 0 1 1 1 0 0 4 1 2 0 0 2 0 0 16 0 1691.8982 E7EVA0;B4DM10;P27816;A0A024R2V0 E7EVA0 592 607 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 0.0044695 45.077 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 483 609 526 807 1307 1307 1924;1925 0 DVQDSLTVSNEAQTAK VHYYEDGNVQLVSHKDVQDSLTVSNEAQTA VQDSLTVSNEAQTAKEFIKIIENAENEYQT K D V A K E 2 0 1 2 0 2 1 0 0 0 1 1 0 0 0 2 2 0 0 2 0 0 16 0 1704.8166 A8K0T9;A0A024R0E5;P52907 A8K0T9 211 226 CAPZA1 F-actin-capping protein subunit alpha-1 yes no 2 1.9481E-18 109.44 1 0.7767 0.94016 NaN 1 Median 0.7767 0.94016 NaN 1 0 Median NaN NaN NaN 0 0 Median 6027400 3415100 2612300 6027400 3415100 2612300 0 0 0 484 14 527 808 1308;1309 1308 2 DVQGWGENDR DQGLLCDLLWSDPDKDVQGWGENDRGVSFT SDPDKDVQGWGENDRGVSFTFGAEVVAKFL K D V D R G 0 1 1 2 0 1 1 2 0 0 0 0 0 0 0 0 0 1 0 1 0 0 10 0 1174.5003 E9PMD7;A0A140VJS9;B3KXM2;P62136;B7ZB67;B4DJ75;V9HW04;P62140 E9PMD7 177 186 PPP1CA;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit no no 2 0.0092959 61.56 1 1.069 1.4277 NaN 1 Median NaN NaN NaN 0 0 Median 1.069 1.4277 NaN 1 0 Median 7252400 3100600 4151800 0 0 0 7252400 3100600 4151800 485 280;470 528 809 1310;1311 1310 2 DVQIGDIVTVGECRPLSK KRHKNMSVHLSPCFRDVQIGDIVTVGECRP IGDIVTVGECRPLSKTVRFNVLKVTKAAGT R D V S K T 0 1 0 2 1 1 1 2 0 2 1 1 0 0 1 1 1 0 0 3 0 0 18 1 1985.0252 P62280;M0R1H5 P62280 119 136 RPS11 40S ribosomal protein S11 yes no 2 3.2322E-05 54.951 1 0.30292 0.45951 NaN 1 Median NaN NaN NaN 0 0 Median 0.30292 0.45951 NaN 1 0 Median 28315000 21633000 6682100 0 0 0 28315000 21633000 6682100 486 788 529 810 1312 1312 1 DVQSPGFLNEPLSSK DNMELSKSATCKNIKDVQSPGFLNEPLSSK DVQSPGFLNEPLSSKSQRRKSLKLKNDKTI K D V S K S 0 0 1 1 0 1 1 1 0 0 2 1 0 1 2 3 0 0 0 1 0 0 15 0 1616.8046 E9PPJ1;Q8NG31;H0YCZ2 E9PPJ1 1047 1061 CASC5 Protein CASC5 yes no 2 7.3385E-60 142.91 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 487 627 530 811 1313;1314;1315 1315 952 0 DVTPPPETEVVLIK KDMSPLSETEMALGKDVTPPPETEVVLIKN KDVTPPPETEVVLIKNVCLPPEMEVALTED K D V I K N 0 0 0 1 0 0 2 0 0 1 1 1 0 0 3 0 2 0 0 3 0 0 14 0 1535.8447 E7EVA0;B4DM10;P27816;A0A024R2V2;A0A024R2S1 E7EVA0 536 549 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 0.015347 50.897 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 488 609 531 812 1316;1317;1318 1318 1926 0 DVTVLSVAEEQDLLK ______________________________ DVTVLSVAEEQDLLKQERLVTVDEIGEVEE K D V L K Q 1 0 0 2 0 1 2 0 0 0 3 1 0 0 0 1 1 0 0 3 0 0 15 0 1657.8774 A0A096LPK8;Q57Z90;Q14966 A0A096LPK8 4 18 ZNF638;NP220 Zinc finger protein 638 yes no 2 0.0007677 45.864 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 489 211 532 813 1319 1319 290 0 DVVLSTSPK SSRSGSQRQGSWDSRDVVLSTSPKLLATAT GSWDSRDVVLSTSPKLLATATANGHGLKGN R D V P K L 0 0 0 1 0 0 0 0 0 0 1 1 0 0 1 2 1 0 0 2 0 0 9 0 944.51786 A0A075B784;A0A024R8V6;Q9P275;B3KMW2 A0A075B784 576 584 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 yes no 2 1.1915E-13 111.86 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 490 107 533 814;815 1320;1321;1322;1323;1324;1325;1326 1322 158;159 0 DVYLSPR SYGGPPRREPLPSRRDVYLSPRDDGYSTKD REPLPSRRDVYLSPRDDGYSTKDSYSSRDY R D V P R D 0 1 0 1 0 0 0 0 0 0 1 0 0 0 1 1 0 0 1 1 0 0 7 0 848.43922 B4E352;P38159;H0Y6E7;H3BT71;Q2VIN3;Q96E39;B3KRG5;H3BUY5 B4E352 165 171 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 yes no 2 0.0083058 73.573 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 491 522 534 816;817 1327;1328;1329;1330 1328 756 0 DVYLSPRDDGYSTK SYGGPPRREPLPSRRDVYLSPRDDGYSTKD RDVYLSPRDDGYSTKDSYSSRDYPSSRDTR R D V T K D 0 1 0 3 0 0 0 1 0 0 1 1 0 0 1 2 1 0 2 1 0 0 14 1 1614.7526 B4E352;P38159;H0Y6E7;H3BT71;Q2VIN3;Q96E39;B3KRG5;H3BUY5 B4E352 165 178 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 yes no 2 3.9732E-68 145.52 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 492 522 535 818;819 1331;1332;1333;1334 1331 756 0 DYAFVHMEK LFERRGRVIECDVVKDYAFVHMEKEADAKA ECDVVKDYAFVHMEKEADAKAAIAQLNGKE K D Y E K E 1 0 0 1 0 0 1 0 1 0 0 1 1 1 0 0 0 0 1 1 0 0 9 0 1138.5117 A0A0S2Z4Z0;Q96PK6;A0A0S2Z567 A0A0S2Z4Z0 113 121 RBM14 RNA-binding protein 14 yes no 2 0.023781 45.161 1 1.1964 1.5937 NaN 1 Median NaN NaN NaN 0 0 Median 1.1964 1.5937 NaN 1 0 Median 4857500 2042600 2814800 0 0 0 4857500 2042600 2814800 493 267 536 820 1335 1335 54 1 DYDHLFK ______________________________ ______________________________ R D Y F K L 0 0 0 2 0 0 0 0 1 0 1 1 0 1 0 0 0 0 1 0 0 0 7 0 936.43413 F5H7F8;B4DTA6;F5H157;Q15286 F5H7F8 4 10 RAB35 Ras-related protein Rab-35 yes no 2 0.0017675 65.038 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 5844500 0 5844500 0 0 0 5844500 0 5844500 494 497 537 821 1336 1336 1 DYDWINAER REAEDGAAKVSKMLKDYDWINAERHLFGQP VSKMLKDYDWINAERHLFGQPNSAYDFKTN K D Y E R H 1 1 1 2 0 0 1 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 9 0 1180.5149 B7ZLZ7;A0A024R158;O95347;A8K984;B3KMB1;A0A0C4DGE5 B7ZLZ7 937 945 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 yes no 2 0.0088122 57.59 1 1 0.56403 0.74566 NaN 1 Median NaN NaN NaN 0 0 Median 0.56403 0.74566 NaN 1 0 Median 12654000 8633000 4021100 1340300 1340300 0 11314000 7292600 4021100 495 27 538 822;823 1337;1338 1338 2 DYEVELLR KEKDAYHKKCDQKKKDYEVELLRFLESLPE KCDQKKKDYEVELLRFLESLPEEEQQRVLG K D Y L R F 0 1 0 1 0 0 2 0 0 0 2 0 0 0 0 0 0 0 1 1 0 0 8 0 1035.5237 B4DNQ1;E9PKP7;A8K962;P17480;O00164;B4DLB0 B4DNQ1 250 257 UBTF Nucleolar transcription factor 1 yes no 2 0.012502 67.032 1 0.83199 1.0962 NaN 1 Median NaN NaN NaN 0 0 Median 0.83199 1.0962 NaN 1 0 Median 5837100 3159200 2678000 0 0 0 5837100 3159200 2678000 496 376 539 824 1339;1340 1340 2 DYGHSSSRDDYPSR DTRDYAPPPRDYTYRDYGHSSSRDDYPSRG RDYGHSSSRDDYPSRGYSDRDGYGRDRDYS R D Y S R G 0 2 0 3 0 0 0 1 1 0 0 0 0 0 1 4 0 0 2 0 0 0 14 1 1640.6815 B4E352;P38159;H0Y6E7;H3BT71;Q2VIN3;Q96E39;B3KRG5;H3BUY5 B4E352 206 219 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 yes no 3 0.0061654 31.827 2 0.76744 0.98649 NaN 1 Median 0.76744 0.98649 NaN 1 0 Median NaN NaN NaN 0 0 Median 8253600 4151300 4102200 8253600 4151300 4102200 0 0 0 497 522 540 825;826 1341;1342;1343 1342 3 DYLHYIR VVTKMKMQRTIVIRRDYLHYIRKYNRFEKR QRTIVIRRDYLHYIRKYNRFEKRHKNMSVH R D Y I R K 0 1 0 1 0 0 0 0 1 1 1 0 0 0 0 0 0 0 2 0 0 0 7 0 978.49232 P62280;M0QZC5;M0R1H5 P62280 91 97 RPS11 40S ribosomal protein S11 yes no 2 5.7014E-17 114.54 1 1 0.52488 0.70858 45.989 2 Median 0.77902 0.98089 NaN 1 0 Median 0.35365 0.51187 NaN 1 0 Median 244520000 177790000 66728000 18272000 10836000 7436600 226250000 166950000 59292000 498 788 541 827;828 1344;1345;1346;1347 1344 4 DYLLSESEDEGDNDGER LLALSQQEELADLPKDYLLSESEDEGDNDG LLSESEDEGDNDGERKHQKLLEAISSLDGK K D Y E R K 0 1 1 4 0 0 4 2 0 0 2 0 0 0 0 2 0 0 1 0 0 0 17 0 1941.7712 Q9BVJ6;O60531 Q9BVJ6 25 41 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes no 2 9.3799E-05 42.913 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 499 919 542 829 1348 1348 1593;1594 0 DYLLSESEDEGDNDGERK LLALSQQEELADLPKDYLLSESEDEGDNDG LSESEDEGDNDGERKHQKLLEAISSLDGKN K D Y R K H 0 1 1 4 0 0 4 2 0 0 2 1 0 0 0 2 0 0 1 0 0 0 18 1 2069.8662 Q9BVJ6;O60531 Q9BVJ6 25 42 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes no 2;3 2.4351E-241 185.28 4 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 500 919 543;544 830;831;832;833 1349;1350;1351;1352;1353;1354 1352 1593;1594 0 DYQELMNTK DALQQAKEDLARLLRDYQELMNTKLALDLE LARLLRDYQELMNTKLALDLEIATYRTLLE R D Y T K L 0 0 1 1 0 1 1 0 0 0 1 1 1 0 0 0 1 0 1 0 0 0 9 0 1140.5121 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;H6VRG2;H6VRF9;CON__P04264 H6VRG3 464 472 KRT1 Keratin, type II cytoskeletal 1 no no 2 0.014733 51.949 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 5135600 5135600 0 0 0 0 5135600 5135600 0 + 501 670 545 834 1355 1355 140 1 DYRDAQEFAADVR HPMDLSTVKRKMENRDYRDAQEFAADVRLM NRDYRDAQEFAADVRLMFSNCYKYNPPDHD R D Y V R L 3 2 0 3 0 1 1 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 13 1 1554.7063 U3KQA6;A0A0G2JHL0;A0A140T9F7;A0A140T9V2;X5CF57;A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440 U3KQA6 407 419 BRD2 Bromodomain-containing protein 2 yes no 3 0.0028658 45.863 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3580700 3580700 0 0 0 0 3580700 3580700 0 502 161 546 835 1356 1356 1 DYVFDKR LNLHSPVKRKLEAEKDYVFDKRLRYSVRQN KRKLEAEKDYVFDKRLRYSVRQNESNCRFR K D Y K R L 0 1 0 2 0 0 0 0 0 0 0 1 0 1 0 0 0 0 1 1 0 0 7 1 941.46068 A0A0B4J291;Q8N8U2 A0A0B4J291 230 236 CDYL2 Chromodomain Y-like protein 2 yes no 2 0.0026558 55.504 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 4195600 4195600 0 0 0 0 4195600 4195600 0 503 236 547 836 1357 1357 1 EAAAGIQWSEEETEDEEEEK ALLPIERAARKQKAREAAAGIQWSEEETED IQWSEEETEDEEEEKEVTPESGPPKVEEAD R E A E K E 3 0 0 1 0 1 9 1 0 1 0 1 0 0 0 1 1 1 0 0 0 0 20 0 2307.9503 P46087;F5H5X6;F5GYR3 P46087 173 192 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes no 2 9.7195E-16 79.639 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 504 763 548 837 1358;1359 1359 1228;1981 0 EAADLDAVPMSLSYEELVR LEPEEYMEPEGADPREAADLDAVPMSLSYE LDAVPMSLSYEELVRRNVELFIATSQKFVQ R E A V R R 3 1 0 2 0 0 3 0 0 0 3 0 1 0 1 2 0 0 1 2 0 0 19 0 2107.0143 A0A0A6YYG7;Q6IBW4;H0YC55 A0A0A6YYG7 454 472 NCAPH2 Condensin-2 complex subunit H2 yes no 2 1.3771E-10 79.837 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 505 230 549 838;839 1360;1361;1362 1362 48 327 0 EAAFDDAVEER ______________________________ MADKEAAFDDAVEERVINEEYKIWKKNTPF K E A E R V 3 1 0 2 0 0 3 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 11 0 1250.5415 Q09028;E9PNS6;E9PNS2;E9PIC4 Q09028 5 15 RBBP4 Histone-binding protein RBBP4 yes no 2 0.0037749 84.17 1 0.9263 1.1991 NaN 1 Median NaN NaN NaN 0 0 Median 0.9263 1.1991 NaN 1 0 Median 14074000 7381900 6691800 0 0 0 14074000 7381900 6691800 506 803 550 840 1363;1364 1363 2 EAALAEVADEK GKEADAEANHREAGKEAALAEVADEKMLSG EAGKEAALAEVADEKMLSGLTKDLQRSLPP K E A E K M 4 0 0 1 0 0 3 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 11 0 1144.5612 B4DRG7;E9PHA2;A8K4T8;Q15003;H7C415 B4DRG7 651 661 NCAPH Condensin complex subunit 2 yes no 2 0.010967 46.64 1 0.62935 0.80127 NaN 1 Median NaN NaN NaN 0 0 Median 0.62935 0.80127 NaN 1 0 Median 7571200 4288300 3282900 0 0 0 7571200 4288300 3282900 507 354 551 841 1365 1365 1 EAALTSEEVGADLEQVEVLQK LFREANELQQWINEKEAALTSEEVGADLEQ EEVGADLEQVEVLQKKFDDFQKDLKANESR K E A Q K K 3 0 0 1 0 2 5 1 0 0 3 1 0 0 0 1 1 0 0 3 0 0 21 0 2257.1325 A0A0D9SF54;A0A0D9SGF6;Q13813;B4DTV8;B4DGT1;Q9UG16;A0A024R889 A0A0D9SF54 1091 1111 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 yes no 2 3.8551E-14 64.244 1 0.74593 0.92635 NaN 1 Median 0.74593 0.92635 NaN 1 0 Median NaN NaN NaN 0 0 Median 5123900 2720100 2403800 5123900 2720100 2403800 0 0 0 508 250 552 842 1366 1366 0 EAAVSASDILQESAIHSPGTVEK SSSSEDSDEEWRRCREAAVSASDILQESAI ILQESAIHSPGTVEKEAKKKRKLKKKAKKV R E A E K E 4 0 0 1 0 1 3 1 1 2 1 1 0 0 1 4 1 0 0 2 0 0 23 0 2338.1652 F5H3K2;E7ENF1;G5EA44;B4DWJ9;F5H7W8;Q96C57;F5H8B7 F5H3K2 118 140 C12orf43 Uncharacterized protein C12orf43 yes no 3 1.0052E-20 93.236 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 509 506 553 843 1367;1368;1369 1368 745;1887 0 EADDDEEVDDNIPEMPSPK KQACQERRCPNMAMKEADDDEEVDDNIPEM DEEVDDNIPEMPSPKKMHQGKKKKQNKNRI K E A P K K 1 0 1 5 0 0 4 0 0 1 0 1 1 0 3 1 0 0 0 1 0 0 19 0 2143.8739 Q59FP7;A0A024R7E3;P26358;I6L9H2 Q59FP7 685 703 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 yes no 2 1.1742E-13 94.688 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 510 91 554 844 1370 1370 16 126 0 EAFAGDDVIRDFLK ELEDEEERNHRQMIKEAFAGDDVIRDFLKE KEAFAGDDVIRDFLKEKREAVEASKPKDVD K E A L K E 2 1 0 3 0 0 1 1 0 1 1 1 0 2 0 0 0 0 0 1 0 0 14 1 1594.7991 Q9BVJ6;B4E343;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6 597 610 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C yes no 3 0.005887 33.204 1 0.73781 0.92866 NaN 1 Median NaN NaN NaN 0 0 Median 0.73781 0.92866 NaN 1 0 Median 4959100 3045700 1913400 0 0 0 4959100 3045700 1913400 511 919 555 845 1371 1371 1 EAFREDLHNR MTLLDLFEVEKDGEKEAFREDLHNRMLLWH KDGEKEAFREDLHNRMLLWHGSRMSNWVGI K E A N R M 1 2 1 1 0 0 2 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 10 1 1285.6163 G3V167;A8K214;Q9UGN5;H0YH02;B4DV82 G3V167 414 423 PARP2 Poly [ADP-ribose] polymerase 2 yes no 3 0.0078915 43.512 1 0.85127 1.0955 NaN 1 Median 0.85127 1.0955 NaN 1 0 Median NaN NaN NaN 0 0 Median 9009100 4642700 4366300 9009100 4642700 4366300 0 0 0 512 343 556 846 1372;1373 1373 2 EAGENAPVLSDDELVSMSVR MTTNPKPNKALKVKKEAGENAPVLSDDELV APVLSDDELVSMSVRELNQHLRGLTKEEVT K E A V R E 2 1 1 2 0 0 3 1 0 0 2 0 1 0 1 3 0 0 0 3 0 0 20 0 2116.9947 A0A024R804;A8WFP5;O60675 A0A024R804 16 35 MAFK Transcription factor MafK yes no 2 1.0864E-14 74.029 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 513 98 557 847 1374;1375 1375 18 138 0 EAGNINTSLHTLGR GSERCKDQKSGERLKEAGNINTSLHTLGRC KEAGNINTSLHTLGRCIAALRQNQQNRSKQ K E A G R C 1 1 2 0 0 0 1 2 1 1 2 0 0 0 0 1 2 0 0 0 0 0 14 0 1481.7587 O95235 O95235 426 439 KIF20A Kinesin-like protein KIF20A yes yes 3 0.00055306 56.599 1 0.47958 0.62315 NaN 1 Median NaN NaN NaN 0 0 Median 0.47958 0.62315 NaN 1 0 Median 22645000 15506000 7138600 0 0 0 22645000 15506000 7138600 514 716 558 848 1376 1376 1 EAHEPLAVADAK KINKQLKKVLKKIVKEAHEPLAVADAKLGG IVKEAHEPLAVADAKLGGVIKEKLNLSCIH K E A A K L 4 0 0 1 0 0 2 0 1 0 1 1 0 0 1 0 0 0 0 1 0 0 12 0 1249.6303 Q9Y2X3;B3KN82;B4DUY3 Q9Y2X3 82 93 NOP58 Nucleolar protein 58 yes no 2;3 0.0013663 65.627 2 0.5331 0.66215 9.8248 2 Median NaN NaN NaN 0 0 Median 0.5331 0.66215 9.8248 2 0 Median 62306000 40341000 21965000 0 0 0 62306000 40341000 21965000 515 964 559 849;850 1377;1378;1379 1378 3 EAHFVR KGTWVQLKRQPAPPREAHFVRTNGKEPELL LKRQPAPPREAHFVRTNGKEPELLEPIPYE R E A V R T 1 1 0 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 6 0 757.38712 Q6IAX2;P46778;Q59GK9 Q6IAX2 137 142 RPL21 60S ribosomal protein L21 yes no 2 0.02176 80.377 1 0.65471 0.95172 NaN 1 Median NaN NaN NaN 0 0 Median 0.65471 0.95172 NaN 1 0 Median 257260000 151250000 106010000 0 0 0 257260000 151250000 106010000 516 764 560 851 1380 1380 1 EAIEGTYIDK PRYYKNIGLGFKTPKEAIEGTYIDKKCPFT FKTPKEAIEGTYIDKKCPFTGNVSIRGRIL K E A D K K 1 0 0 1 0 0 2 1 0 2 0 1 0 0 0 0 1 0 1 0 0 0 10 0 1137.5554 P62280;M0QZC5 P62280 49 58 RPS11 40S ribosomal protein S11 yes no 2 0.0010728 74.92 1 1 0.42653 0.5259 28.639 2 Median 0.5281 0.64395 NaN 1 0 Median 0.3445 0.42949 NaN 1 0 Median 15259000 10929000 4329500 5753400 4326800 1426600 9505300 6602400 2902900 517 788 561 852;853 1381;1382;1383 1381 3 EAIEGTYIDKK PRYYKNIGLGFKTPKEAIEGTYIDKKCPFT KTPKEAIEGTYIDKKCPFTGNVSIRGRILS K E A K K C 1 0 0 1 0 0 2 1 0 2 0 2 0 0 0 0 1 0 1 0 0 0 11 1 1265.6503 P62280;M0QZC5 P62280 49 59 RPS11 40S ribosomal protein S11 yes no 2 4.5506E-05 111.06 1 0.34237 0.41249 NaN 1 Median NaN NaN NaN 0 0 Median 0.34237 0.41249 NaN 1 0 Median 52183000 37773000 14409000 0 0 0 52183000 37773000 14409000 518 788 562 854 1384 1384 1 EAIQCVDNNQSVLVSAHTSAGK KAAKEYPFILDAFQREAIQCVDNNQSVLVS NNQSVLVSAHTSAGKTVCAEYAIALALREK R E A G K T 3 0 2 1 1 2 1 1 1 1 1 1 0 0 0 3 1 0 0 3 0 0 22 0 2327.1176 B4E3M6;P42285 B4E3M6 45 66 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes no 3 4.3171E-05 34.221 1 0.63158 0.76855 NaN 1 Median 0.63158 0.76855 NaN 1 0 Median NaN NaN NaN 0 0 Median 10899000 6475000 4423800 10899000 6475000 4423800 0 0 0 519 524 563 855 1385 1385 1 EAITHLLGVALTR LENPTINHQKNRPTREAITHLLGVALTRYN TREAITHLLGVALTRYNHMLSATVKIIQML R E A T R Y 2 1 0 0 0 0 1 1 1 1 3 0 0 0 0 0 2 0 0 1 0 0 13 0 1392.8089 Q15021;B4E0B7;B3KY03;B3KMS0;E7EN77;Q6ZV00;A0PJ76 Q15021 221 233 NCAPD2 Condensin complex subunit 1 yes no 2;3 0.0023222 42.568 2 0.59661 0.79636 NaN 1 Median NaN NaN NaN 0 0 Median 0.59661 0.79636 NaN 1 0 Median 13083000 8886900 4195900 0 0 0 13083000 8886900 4195900 520 820 564 856;857 1386;1387;1388 1386 3 EAIVTSEELGQDLEHVEVLQK YLRECEDVMDWINDKEAIVTSEELGQDLEH EELGQDLEHVEVLQKKFEEFQTDMAAHEER K E A Q K K 1 0 0 1 0 2 5 1 1 1 3 1 0 0 0 1 1 0 0 3 0 0 21 0 2365.2013 A0A0D9SF54;A0A0D9SGF6;Q13813;B4DTV8;B4DGT1 A0A0D9SF54 169 189 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes no 3 0.012482 17.066 1 0.86823 1.0551 NaN 1 Median 0.86823 1.0551 NaN 1 0 Median NaN NaN NaN 0 0 Median 3478400 1606900 1871600 3478400 1606900 1871600 0 0 0 521 250 565 858 1389 1389 1 EALENCITLQDFNR ELKMAEIKVKLIEAKEALENCITLQDFNRA KEALENCITLQDFNRASELKEEIKALEDAR K E A N R A 1 1 2 1 1 1 2 0 0 1 2 0 0 1 0 0 1 0 0 0 0 0 14 0 1721.8043 Q6NUR1;Q9BPX3;H0Y9Z8 Q6NUR1 504 517 NCAPG Condensin complex subunit 3 yes no 2 0.00076401 55.426 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 522 857 566 859 1390 1390 1 EALIAASETLK LSRHNTAVSQLTKAKEALIAASETLKERKA TKAKEALIAASETLKERKAAIRDIEGKLPQ K E A L K E 3 0 0 0 0 0 2 0 0 1 2 1 0 0 0 1 1 0 0 0 0 0 11 0 1144.634 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 525 535 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 2 0.015986 39.937 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2070300 2070300 0 0 0 0 2070300 2070300 0 523 941 567 860 1391 1391 1 EAMVQAEEAAAEITR YETGEIPRKNLDVMKEAMVQAEEAAAEITR EAMVQAEEAAAEITRKLEKQEKKRLKKEKK K E A T R K 5 1 0 0 0 1 4 0 0 1 0 0 1 0 0 0 1 0 0 1 0 0 15 0 1617.7668 A8K9K6;O00567;A0PJ92;Q9BSN3;H0Y653;H0YDU4 A8K9K6 423 437 NOP56 Nucleolar protein 56 yes no 2 4.0325E-18 109.84 1 0.50772 0.65407 NaN 1 Median NaN NaN NaN 0 0 Median 0.50772 0.65407 NaN 1 0 Median 19619000 12723000 6895900 0 0 0 19619000 12723000 6895900 524 379 568 861 1392;1393;1394 1392 75 3 EAQQKVPDEEENEESDNEK LIQRGYDSDPVKAWKEAQQKVPDEEENEES KVPDEEENEESDNEKETEKSDSVTDSGPTF K E A E K E 1 0 2 2 0 2 7 0 0 0 0 2 0 0 1 1 0 0 0 1 0 0 19 1 2245.9459 P11388 P11388 1092 1110 TOP2A DNA topoisomerase 2-alpha yes yes 2;3 6.1927E-53 130.19 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 525 734 569 862;863 1395;1396;1397;1398;1399 1396 1135 0 EAQQKVPDEEENEESDNEKETEK LIQRGYDSDPVKAWKEAQQKVPDEEENEES EEENEESDNEKETEKSDSVTDSGPTFNYLL K E A E K S 1 0 2 2 0 2 9 0 0 0 0 3 0 0 1 1 1 0 0 1 0 0 23 2 2733.1737 P11388 P11388 1092 1114 TOP2A DNA topoisomerase 2-alpha yes yes 3 1.1306E-276 209.46 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 526 734 570 864 1400;1401;1402 1401 1135 0 EASLQFVVEPSEATNR QKSHPKSVPVSSKKKEASLQFVVEPSEATN ASLQFVVEPSEATNRSVQAHEVHQKILATD K E A N R S 2 1 1 0 0 1 3 0 0 0 1 0 0 1 1 2 1 0 0 2 0 0 16 0 1775.869 Q03188;H0Y8J2 Q03188 94 109 CENPC Centromere protein C yes no 2 8.7287E-09 91.657 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 527 799 571 865 1403 1403 1303 0 EASYSLIR EDVLPLAFTRLCEPKEASYSLIRKYVSQYY TRLCEPKEASYSLIRKYVSQYYPKLRVDIR K E A I R K 1 1 0 0 0 0 1 0 0 1 1 0 0 0 0 2 0 0 1 0 0 0 8 0 937.4869 Q5SSJ5;X6RGJ2;B0QZK4;Q5SWC8 Q5SSJ5 275 282 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 2 0.022095 52.786 1 1.1386 1.5209 NaN 1 Median NaN NaN NaN 0 0 Median 1.1386 1.5209 NaN 1 0 Median 10255000 4375300 5879200 0 0 0 10255000 4375300 5879200 528 842 572 866 1404 1404 1 EASYSLIRK EDVLPLAFTRLCEPKEASYSLIRKYVSQYY RLCEPKEASYSLIRKYVSQYYPKLRVDIRP K E A R K Y 1 1 0 0 0 0 1 0 0 1 1 1 0 0 0 2 0 0 1 0 0 0 9 1 1065.5819 Q5SSJ5;X6RGJ2;B0QZK4;Q5SWC8 Q5SSJ5 275 283 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 2 6.1161E-08 99.305 1 0.39499 0.55203 NaN 1 Median NaN NaN NaN 0 0 Median 0.39499 0.55203 NaN 1 0 Median 14492000 9943400 4548200 0 0 0 14492000 9943400 4548200 529 842 573 867 1405 1405 1 EAVQLVNTREEVEDLCR LHLLTQEALSIHGVKEAVQLVNTREEVEDL VQLVNTREEVEDLCRLDKMIDLIIPRGSSQ K E A C R L 1 2 1 1 1 1 4 0 0 0 2 0 0 0 0 0 1 0 0 3 0 0 17 1 2059.0004 P54886 P54886 531 547 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 3 0.0012025 34.612 1 1.2628 1.5907 NaN 1 Median 1.2628 1.5907 NaN 1 0 Median NaN NaN NaN 0 0 Median 3634400 1784600 1849800 3634400 1784600 1849800 0 0 0 530 778 574 868 1406;1407 1406 2 EAVREGSPANWK EMNIELVPPYMIASKEAVREGSPANWKRKE ASKEAVREGSPANWKRKEKLPQVTRSWHNY K E A W K R 2 1 1 0 0 0 2 1 0 0 0 1 0 0 1 1 0 1 0 1 0 0 12 1 1342.663 D3DNS0;Q6FI97;O96019 D3DNS0 24 35 ACTL6A;BAF53A Actin-like protein 6A yes no 2 0.025923 56.122 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 531 588 575 869 1408 1408 875 0 EAVVQEPER EAQINTAKRLLEKGKEAVVQEPERSWFQTK LLEKGKEAVVQEPERSWFQTKEERKKEKIA K E A E R S 1 1 0 0 0 1 3 0 0 0 0 0 0 0 1 0 0 0 0 2 0 0 9 0 1055.5247 B7Z6D5;B3GQE6;Q96GQ7;Q53G15 B7Z6D5 611 619 DDX27 Probable ATP-dependent RNA helicase DDX27 yes no 2 0.0057981 58.981 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1482200 1482200 0 0 0 0 1482200 1482200 0 532 423 576 870 1409 1409 1 ECPSDECGAGVFMASHFDR YYKVDENGKISRLRRECPSDECGAGVFMAS DECGAGVFMASHFDRHYCGKCCLTYCFNKP R E C D R H 2 1 0 2 2 0 2 2 1 0 0 0 1 2 1 2 0 0 0 1 0 0 19 0 2170.8507 Q5RKT7;B2RDW1;P62979;Q8WYN9 Q5RKT7 120 138 RPS27A;HEL112 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a yes no 3 4.7102E-11 70.837 1 0.52279 0.66854 NaN 1 Median NaN NaN NaN 0 0 Median 0.52279 0.66854 NaN 1 0 Median 17345000 11090000 6254300 0 0 0 17345000 11090000 6254300 533 417 577 871 1410 1410 85 1 EDAIEHFMK GTVIGSNKLEQMPSKEDAIEHFMKLYEEKT EQMPSKEDAIEHFMKLYEEKTGNAWHSKNF K E D M K L 1 0 0 1 0 0 2 0 1 1 0 1 1 1 0 0 0 0 0 0 0 0 9 0 1118.5066 A0A024R3T8;P09874;B2R5W3;B4E0E1 A0A024R3T8 608 616 PARP1 Poly [ADP-ribose] polymerase 1 yes no 2 0.0078864 60.436 1 0.37973 0.49763 NaN 1 Median NaN NaN NaN 0 0 Median 0.37973 0.49763 NaN 1 0 Median 15505000 10890000 4614900 0 0 0 15505000 10890000 4614900 534 56 578 872 1411;1412 1412 8 2 EDGSGDRGDGPFR ______________________________ GKEDGSGDRGDGPFRLGGHGPSFPLKGITE K E D F R L 0 2 0 3 0 0 1 4 0 0 0 0 0 1 1 1 0 0 0 0 0 0 13 1 1363.5753 Q53T09;P13010 Q53T09 8 20 XRCC5 X-ray repair cross-complementing protein 5 yes no 3 0.0070217 37.013 1 2 0.55657 0.93385 20.15 3 Median 0.55657 0.72364 NaN 1 0 Median 0.60631 1.0029 10.092 2 0 Median 129770000 82379000 47394000 24534000 14848000 9686300 105240000 67531000 37708000 535 735 579 873;874;875 1413;1414;1415;1416;1417 1416 5 EDILENEDEQNSPPK SESDEQQWPEEKRLKEDILENEDEQNSPPK EDILENEDEQNSPPKKGKRGRPPKPLGGGT K E D P K K 0 0 2 2 0 1 4 0 0 1 1 1 0 0 2 1 0 0 0 0 0 0 15 0 1755.7799 Q9NTI5;A9IYQ1 Q9NTI5 1272 1286 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 2 0.00054814 53.3 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 536 940 580 876 1418 1418 1668 0 EDILENEDEQNSPPKK SESDEQQWPEEKRLKEDILENEDEQNSPPK DILENEDEQNSPPKKGKRGRPPKPLGGGTP K E D K K G 0 0 2 2 0 1 4 0 0 1 1 2 0 0 2 1 0 0 0 0 0 0 16 1 1883.8749 Q9NTI5;A9IYQ1 Q9NTI5 1272 1287 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 2;3 1.7545E-13 102.36 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 537 940 581 877;878;879 1419;1420;1421;1422;1423 1423 1668 0 EDLIREER PELSKFLYQLHETEKEDLIREERSRRERVR QLHETEKEDLIREERSRRERVRQSRMDTDL K E D E R S 0 2 0 1 0 0 3 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 8 1 1058.5356 A4FU77;O75643;Q9H8B9 A4FU77 120 127 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 2 0.0089138 74.464 1 1.2379 1.9779 NaN 1 Median NaN NaN NaN 0 0 Median 1.2379 1.9779 NaN 1 0 Median 14361000 6523300 7837400 0 0 0 14361000 6523300 7837400 538 316 582 880 1424 1424 1 EDLPAENGETKTEESPASDEAGEK GAKGKQAEVANQETKEDLPAENGETKTEES TKTEESPASDEAGEKEAKSD__________ K E D E K E 3 0 1 2 0 0 7 2 0 0 1 2 0 0 2 2 2 0 0 0 0 0 24 1 2532.0987 A6NL93;Q6NSG7;Q3B790;A6NEL0;A0A024R2A3;P05114 A6NL93 62 85 HMGN1;hCG_1979072 Non-histone chromosomal protein HMG-14 yes no 3 4.9734E-13 50.865 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 539 45 583 881 1425 1425 45 0 EDLQELNDR STPLSPTRITRLQEKEDLQELNDRLAVYID TRLQEKEDLQELNDRLAVYIDRVRSLETEN K E D D R L 0 1 1 2 0 1 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 9 0 1130.5204 P02545;W8QEH3;Q5I6Y5;Q8N519;Q3BDU5;W5X314 P02545 33 41 LMNA Prelamin-A/C;Lamin-A/C yes no 2 6.7393E-05 73.248 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1888100 1888100 0 1888100 1888100 0 0 0 0 540 725 584 882 1426 1426 1 EDLRNEVQK E D Q K 0 1 1 1 0 1 2 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 9 1 1129.5728 REV__B1AJZ2 yes no 3 0.0037867 46.158 1 0.64968 0.98058 NaN 1 Median NaN NaN NaN 0 0 Median 0.64968 0.98058 NaN 1 0 Median 26945000 16212000 10733000 0 0 0 26945000 16212000 10733000 + 541 980 585 883 1427 1427 1 EDLSGIAEMFK RVLNNFISNQKMDFKEDLSGIAEMFKTPVK MDFKEDLSGIAEMFKTPVKEQPQLTSTCHI K E D F K T 1 0 0 1 0 0 2 1 0 1 1 1 1 1 0 1 0 0 0 0 0 0 11 0 1238.5853 P46013;Q70L73 P46013 750 760 MKI67 Antigen KI-67 no no 2 0.024216 43.651 1 0.79216 1.0208 NaN 1 Median NaN NaN NaN 0 0 Median 0.79216 1.0208 NaN 1 0 Median 7099400 4207100 2892300 0 0 0 7099400 4207100 2892300 542 762;865 586 884 1428 1428 173 1 EDSVKPGAHLTVK KVDGRVVEPKRAVSREDSVKPGAHLTVKKI SREDSVKPGAHLTVKKIFVGGIKEDTEEYN R E D V K K 1 0 0 1 0 0 1 1 1 0 1 2 0 0 1 1 1 0 0 2 0 0 13 1 1379.7409 P51991;Q65ZQ3;B4E3E6;B4DDB6 P51991 114 126 HNRNPA3;D10S102;HNRPA3 Heterogeneous nuclear ribonucleoprotein A3 yes no 3 0.012365 30.874 1 2.6798 3.3321 NaN 1 Median NaN NaN NaN 0 0 Median 2.6798 3.3321 NaN 1 0 Median 17917000 4001400 13916000 0 0 0 17917000 4001400 13916000 543 774 587 885 1429 1429 1 EDVEVAESPLR LSTVHPASPPLLCTREDVEVAESPLRVLAE LCTREDVEVAESPLRVLAETPDSFEKHIRS R E D L R V 1 1 0 1 0 0 3 0 0 0 1 0 0 0 1 1 0 0 0 2 0 0 11 0 1242.6092 B7Z5I6;B4DP20;J3KMX1;Q99567 B7Z5I6 510 520 NUP88 Nuclear pore complex protein Nup88 yes no 2 0.018131 52.071 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 544 489 588 886 1430;1431 1431 719 0 EEAEQLRR FVEKERQRLENLRRKEEAEQLRRQKVEEDK LENLRRKEEAEQLRRQKVEEDKRRRLEEVK K E E R R Q 1 2 0 0 0 1 3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 8 1 1029.5203 Q9NQS7;B3KPD3 Q9NQS7 549 556 INCENP Inner centromere protein yes no 3 0.0014945 58.782 1 1.0263 1.6535 NaN 1 Median NaN NaN NaN 0 0 Median 1.0263 1.6535 NaN 1 0 Median 15383000 7599700 7783200 0 0 0 15383000 7599700 7783200 545 932 589 887 1432 1432 1 EEAPASPLRPLYPQISPLK ______________________________ ASPLRPLYPQISPLKIHIPEPDLRSMVSPV K E E L K I 2 1 0 0 0 1 2 0 0 1 3 1 0 0 5 2 0 0 1 0 0 0 19 1 2105.1521 U3KQ26;B4DY33;A4D1Z4;P85037 U3KQ26 15 33 FOXK1;KIAA0415 Forkhead box protein K1 yes no 2 9.1166E-06 41.912 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 546 312 590 888 1433 1433 464;465 0 EEAQSLEDLAGFK AARVTGMKKWPRTPKEEAQSLEDLAGFKEL PKEEAQSLEDLAGFKELFQTPGPSEESMTD K E E F K E 2 0 0 1 0 1 3 1 0 0 2 1 0 1 0 1 0 0 0 0 0 0 13 0 1435.6831 P46013 P46013 1094 1106 MKI67 Antigen KI-67 yes no 2 2.9444E-22 114.72 2 2 0.955 1.1834 NaN 1 Median NaN NaN NaN 0 0 Median 0.955 1.1834 NaN 1 0 Median 29549000 13595000 15954000 2077800 0 2077800 27471000 13595000 13877000 547 762 591;592 889;890;891;892 1434;1435;1436;1437;1438;1439 1434 1206 3 EEEEEEEEDQEGDRETTIR RLKPPAGWKADLLQREEEEEEEEDQEGDRE EEEEDQEGDRETTIRGKATPAEEEKTGKVK R E E I R G 0 2 0 2 0 1 10 1 0 1 0 0 0 0 0 0 2 0 0 0 0 0 19 1 2350.9521 A0A0B4J2E5;Q15269 A0A0B4J2E5 240 258 PWP2 Periodic tryptophan protein 2 homolog yes no 3 0.018911 19.791 1 0.77167 1.0722 NaN 1 Median NaN NaN NaN 0 0 Median 0.77167 1.0722 NaN 1 0 Median 6507700 3950100 2557600 0 0 0 6507700 3950100 2557600 548 238 593 893 1440 1440 0 EEEEQQEGGFASPR EALANREREKENSKREEEEQQEGGFASPRT REEEEQQEGGFASPRTGKGKWKRKSAGGGP R E E P R T 1 1 0 0 0 2 5 2 0 0 0 0 0 1 1 1 0 0 0 0 0 0 14 0 1591.675 A0A087WVR3;A0A087WTW0;Q96T88;B4E0F9;A0A087WWG9 A0A087WVR3 641 654 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes no 2 1.4963E-30 102.15 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 549 181 594 894 1441 1441 248 0 EEEIAALVIDNGSGMCK ______________________________ EIAALVIDNGSGMCKAGFAGDDAPRAVFPS M E E C K A 2 0 1 1 1 0 3 2 0 2 1 1 1 0 0 1 0 0 0 1 0 0 17 0 1834.8441 P63261;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65 P63261 2 18 ACTG1 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed yes no 2 3.8896E-06 59.57 1 0.69751 0.80449 NaN 1 Median 0.69751 0.80449 NaN 1 0 Median NaN NaN NaN 0 0 Median 2207200 1439700 767460 2207200 1439700 767460 0 0 0 550 794 595 895 1442;1443 1442 185 2 EEFEHQQK NEIINWLDKNQTAEKEEFEHQQKELEKVCN KNQTAEKEEFEHQQKELEKVCNPIITKLYQ K E E Q K E 0 0 0 0 0 2 3 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 8 0 1073.4778 E9PKE3;V9HW22;Q53GZ6;P11142;B3KTV0;E9PNE6;Q96IS6;A8K7Q2;B4E1Q1;Q9NZ87;Q9NWW3;E9PM13;Q96H53;E9PS65;Q96BE0 E9PKE3 571 578 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein yes no 2 1.5264E-07 101.28 1 1.6244 2.0855 NaN 1 Median NaN NaN NaN 0 0 Median 1.6244 2.0855 NaN 1 0 Median 11230000 3984300 7245800 0 0 0 11230000 3984300 7245800 551 623 596 896 1444 1444 1 EEGETADTVGCCSLR LYFIDKLALRAGNEKEEGETADTVGCCSLR EEGETADTVGCCSLRVEHINLHPELDGQEY K E E L R V 1 1 0 1 2 0 3 2 0 0 1 0 0 0 0 1 2 0 0 1 0 0 15 0 1682.6876 P11387;B9EG90 P11387 494 508 TOP1 DNA topoisomerase 1 yes no 2 0.0053671 38.021 1 0.78881 1.004 NaN 1 Median 0.78881 1.004 NaN 1 0 Median NaN NaN NaN 0 0 Median 6421200 3395300 3025900 6421200 3395300 3025900 0 0 0 552 733 597 897 1445;1446 1445 2 EEHGIELSSPR RKPRVKKENKVPRLKEEHGIELSSPRHSDN PRLKEEHGIELSSPRHSDNPSEEGEVKDDG K E E P R H 0 1 0 0 0 0 3 1 1 1 1 0 0 0 1 2 0 0 0 0 0 0 11 0 1252.6048 O14647;A0A024RC75 O14647 1357 1367 CHD2 Chromodomain-helicase-DNA-binding protein 2 yes no 2;3 1.7413E-81 154.67 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 553 697 598 898;899;900 1447;1448;1449;1450 1448 1029;1030 0 EEHLDVASPDK SSEPVPGEIIAVRVKEEHLDVASPDKASSP VRVKEEHLDVASPDKASSPELPVSVENIKQ K E E D K A 1 0 0 2 0 0 2 0 1 0 1 1 0 0 1 1 0 0 0 1 0 0 11 0 1238.5779 B3KPJ8;A0A0S2Z5X6;Q969R5 B3KPJ8 676 686 L3MBTL2 Lethal(3)malignant brain tumor-like protein 2 yes no 2 0.00078829 79.283 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 554 272 599 901 1451;1452 1452 372 0 EEIDPDEEESAK SGPNTQNEDIEKEVKEEIDPDEEESAKKKH EVKEEIDPDEEESAKKKHLDKKRKLKEMFD K E E A K K 1 0 0 2 0 0 5 0 0 1 0 1 0 0 1 1 0 0 0 0 0 0 12 0 1389.5783 Q14692 Q14692 811 822 BMS1 Ribosome biogenesis protein BMS1 homolog yes yes 2 0.0074483 54.898 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 555 817 600 902 1453 1453 1348 0 EEIFDDASPGK ______________________________ ______________________________ M E E G K Q 1 0 0 2 0 0 2 1 0 1 0 1 0 1 1 1 0 0 0 0 0 0 11 0 1206.5404 B7ZAX9;B4DZC0 B7ZAX9 2 12 yes no 2 0.0033416 55.261 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 556 510 601 903 1454 1454 749 0 EEIQETQTPTHSR KDDEIVFKQPISCVKEEIQETQTPTHSRKK VKEEIQETQTPTHSRKKRRRSSNQ______ K E E S R K 0 1 0 0 0 2 3 0 1 1 0 0 0 0 1 1 3 0 0 0 0 0 13 0 1554.7274 Q9BYG3;H7BZL0 Q9BYG3 272 284 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein yes no 2;3 2.8212E-142 158.56 2 0.80245 1.1139 NaN 1 Median NaN NaN NaN 0 0 Median 0.80245 1.1139 NaN 1 0 Median 79401000 37381000 42020000 0 0 0 79401000 37381000 42020000 557 922 602 904;905 1455;1456;1457 1457 3 EEIQSSISGVTAAYNR DEPPNFVQNSMQLSREEIQSSISGVTAAYN EIQSSISGVTAAYNREQLWLANEGLITRLQ R E E N R E 2 1 1 0 0 1 2 1 0 2 0 0 0 0 0 3 1 0 1 1 0 0 16 0 1723.8377 A0A087WWP1;Q6P1N4;H0YLE8;B4E2M0;A0A0J9YXZ5;A4QPB0;A0A024RC65;P46940 A0A087WWP1 34 49 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 2 7.5897E-08 68.44 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 558 152 603 906 1458 1458 1 EEISATQIIVCTPEK GITVAELTGDHQLCKEEISATQIIVCTPEK EEISATQIIVCTPEKWDIITRKGGERTYTQ K E E E K W 1 0 0 0 1 1 3 0 0 3 0 1 0 0 1 1 2 0 0 1 0 0 15 0 1716.8604 A4FU77;O75643;Q9H8B9 A4FU77 329 343 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 2 1.2172E-06 70.412 1 1 0.76561 0.96046 20.259 2 Median 0.66499 0.83227 NaN 1 0 Median 0.88146 1.1084 NaN 1 0 Median 26557000 15282000 11275000 16337000 9558900 6778100 10220000 5723000 4497300 559 316 604 907;908 1459;1460;1461 1461 3 EELEQASQAHGAR ITDLQSSISNLSQAKEELEQASQAHGARLT AKEELEQASQAHGARLTAQVASLTSELTTL K E E A R L 3 1 0 0 0 2 3 1 1 0 1 0 0 0 0 1 0 0 0 0 0 0 13 0 1424.6644 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;A0A024R5G4;F5H4J1;A8K394;Q3SYK8;F5H6Y5 A0A087WY61 483 495 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 yes no 2;3 1.1596E-22 112.89 2 0.27708 0.36053 5.1701 2 Median NaN NaN NaN 0 0 Median 0.27708 0.36053 5.1701 2 0 Median 45213000 36355000 8857800 0 0 0 45213000 36355000 8857800 560 71 605 909;910 1462;1463;1464;1465 1463 4 EELEQTYHAK HEMREQHDAQVRLYKEELEQTYHAKLENAR VRLYKEELEQTYHAKLENARLSSEMNTSTV K E E A K L 1 0 0 0 0 1 3 0 1 0 1 1 0 0 0 0 1 0 1 0 0 0 10 0 1246.583 P20700;B4DZT3;E9PBF6;A0A0D9SFE5;Q6DC98 P20700 262 271 LMNB1 Lamin-B1 yes no 2 6.4067E-08 99.442 1 1.7893 2.3608 NaN 1 Median NaN NaN NaN 0 0 Median 1.7893 2.3608 NaN 1 0 Median 14247000 5513100 8733600 0 0 0 14247000 5513100 8733600 561 745 606 911 1466;1467 1466 2 EELGFRPEYSASQLK MIDRWYHPGCFVKNREELGFRPEYSASQLK EELGFRPEYSASQLKGFSLLATEDKEALKK R E E L K G 1 1 0 0 0 1 3 1 0 0 2 1 0 1 1 2 0 0 1 0 0 0 15 1 1752.8683 A0A024R3T8;P09874;B2R5W3;B4E0E1;Q05D33;Q6PJL0 A0A024R3T8 168 182 PARP1 Poly [ADP-ribose] polymerase 1 yes no 3 0.0002653 58.814 1 0.23687 0.32888 NaN 1 Median NaN NaN NaN 0 0 Median 0.23687 0.32888 NaN 1 0 Median 13875000 11535000 2340400 0 0 0 13875000 11535000 2340400 562 56 607 912 1468 1468 1 EELLAVGK TKQQLKASLGKVGVKEELLAVGKFTRTSGE LGKVGVKEELLAVGKFTRTSGETTHTHREP K E E G K F 1 0 0 0 0 0 2 1 0 0 2 1 0 0 0 0 0 0 0 1 0 0 8 0 857.48583 P46013 P46013 1036 1043 MKI67 Antigen KI-67 yes no 2 0.023636 49.358 1 1.0567 1.3366 NaN 1 Median NaN NaN NaN 0 0 Median 1.0567 1.3366 NaN 1 0 Median 10495000 5153000 5341800 0 0 0 10495000 5153000 5341800 563 762 608 913 1469;1470 1469 2 EELLFMKK NITRLQLETEIEALKEELLFMKKNHEEEVK TEIEALKEELLFMKKNHEEEVKGLQAQIAS K E E K K N 0 0 0 0 0 0 2 0 0 0 2 2 1 1 0 0 0 0 0 0 0 0 8 1 1036.5627 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__P05784 F8VZY9 208 215 KRT18 Keratin, type I cytoskeletal 18 yes no 2 0.00066041 86.953 1 1.2654 1.5723 NaN 1 Median NaN NaN NaN 0 0 Median 1.2654 1.5723 NaN 1 0 Median 18167000 8614800 9552600 0 0 0 18167000 8614800 9552600 564 134 609 914 1471;1472 1472 26 2 EELMSSDLEETAGSTSIPK SISFSKPKKKKSFSKEELMSSDLEETAGST SSDLEETAGSTSIPKRKKSTPKEETVNDPE K E E P K R 1 0 0 1 0 0 4 1 0 1 2 1 1 0 1 4 2 0 0 0 0 0 19 0 2022.9303 A8K9K6;O00567;Q9BSN3 A8K9K6 515 533 NOP56 Nucleolar protein 56 yes no 2 3.6087E-33 99.011 3 4 0.57284 0.71086 NaN 1 Median NaN NaN NaN 0 0 Median 0.57284 0.71086 NaN 1 0 Median 34707000 19069000 15638000 0 0 0 34707000 19069000 15638000 565 379 610;611;612;613 915;916;917;918;919;920;921 1473;1474;1475;1476;1477;1478;1479;1480;1481;1482;1483;1484;1485 1478 76 575;576 4 EELSAVER STKRCPKTRPRKEVKEELSAVERLTQTSGQ RPRKEVKEELSAVERLTQTSGQSTHTHKEP K E E E R L 1 1 0 0 0 0 3 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 8 0 931.46108 P46013 P46013 2614 2621 MKI67 Antigen KI-67 yes yes 2 0.00013709 95.531 1 0.90621 1.182 NaN 1 Median NaN NaN NaN 0 0 Median 0.90621 1.182 NaN 1 0 Median 23788000 12443000 11345000 0 0 0 23788000 12443000 11345000 566 762 614 922 1486;1487 1487 2 EEPLSEEEPCTSTAIASPEK SVKKKKKRGKKKHIKEEPLSEEEPCTSTAI EEEPCTSTAIASPEKKKKKKKKRENED___ K E E E K K 2 0 0 0 1 0 6 0 0 1 1 1 0 0 3 3 2 0 0 0 0 0 20 0 2202.9838 Q9Y2X3;B3KN82 Q9Y2X3 498 517 NOP58 Nucleolar protein 58 yes no 2 1.4382E-144 166.91 3 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 567 964 615;616 923;924;925;926;927;928 1488;1489;1490;1491;1492;1493;1494;1495;1496;1497 1494 1746;1747;1748 0 EEPLSEEEPCTSTAIASPEKK SVKKKKKRGKKKHIKEEPLSEEEPCTSTAI EEPCTSTAIASPEKKKKKKKKRENED____ K E E K K K 2 0 0 0 1 0 6 0 0 1 1 2 0 0 3 3 2 0 0 0 0 0 21 1 2331.0788 Q9Y2X3;B3KN82 Q9Y2X3 498 518 NOP58 Nucleolar protein 58 yes no 3 4.6615E-10 50.498 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 568 964 617 929 1498 1498 1746;1747;1748 0 EEPPSPIEATPPQSLLEK TVASSDEVCDGDREKEEPPSPIEATPPQSL PSPIEATPPQSLLEKVSKKKTPKTVKMPKP K E E E K V 1 0 0 0 0 1 4 0 0 1 2 1 0 0 5 2 1 0 0 0 0 0 18 0 1960.9993 O75151 O75151 470 487 PHF2 Lysine-specific demethylase PHF2 yes yes 2 3.3974E-06 51.606 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 569 708 618 930 1499 1499 1057 0 EESGKPGAHVTVK SIDGRVVEPKRAVAREESGKPGAHVTVKKL AREESGKPGAHVTVKKLFVGGIKEDTEEHH R E E V K K 1 0 0 0 0 0 2 2 1 0 0 2 0 0 1 1 1 0 0 2 0 0 13 1 1337.6939 I6L957;A0A087WUI2;A0A024RA28;P22626 I6L957 88 100 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 3 0.0028318 51.546 1 1 2.1788 2.6458 NaN 1 Median NaN NaN NaN 0 0 Median 2.1788 2.6458 NaN 1 0 Median 39138000 13800000 25338000 3687200 3687200 0 35451000 10113000 25338000 570 125 619 931;932 1500;1501 1501 2 EETEIIEGEVVEIQIDRPATGTGSK ALTQAFRRSIGVRIKEETEIIEGEVVEIQI VEIQIDRPATGTGSKVGKLTLKTTEMETIY K E E S K V 1 1 0 1 0 1 6 3 0 4 0 1 0 0 1 1 3 0 0 2 0 0 25 1 2699.3501 B4DW30;X6R2L4;M0R0Y3;B3KNL2;Q9Y230 B4DW30 133 157 RUVBL2 RuvB-like 2 yes no 3 4.443E-05 33.909 1 0.98292 1.3197 NaN 1 Median NaN NaN NaN 0 0 Median 0.98292 1.3197 NaN 1 0 Median 10467000 6127500 4339700 0 0 0 10467000 6127500 4339700 571 433 620 933 1502 1502 1 EETVGIFSPLSVK KRCSKVVSFSKPIEKEETVGIFSPLSVKLN EKEETVGIFSPLSVKLNIVISPYHFDNSWK K E E V K L 0 0 0 0 0 0 2 1 0 1 1 1 0 1 1 2 1 0 0 2 0 0 13 0 1404.75 H7C2W2;A0A0D9SFM0;Q149N8 H7C2W2 64 76 SHPRH E3 ubiquitin-protein ligase SHPRH yes no 2 0.0020227 56.569 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 572 252 621 934 1503;1504 1504 350 0 EETVNDPEEAGHR AGSTSIPKRKKSTPKEETVNDPEEAGHRSG PKEETVNDPEEAGHRSGSKKKRKFSKGEPV K E E H R S 1 1 1 1 0 0 4 1 1 0 0 0 0 0 1 0 1 0 0 1 0 0 13 0 1481.6383 A8K9K6;O00567;Q9BSN3 A8K9K6 541 553 NOP56 Nucleolar protein 56 yes no 3 0.0021285 43.798 1 0.47879 0.6625 NaN 1 Median NaN NaN NaN 0 0 Median 0.47879 0.6625 NaN 1 0 Median 59055000 37493000 21562000 0 0 0 59055000 37493000 21562000 573 379 622 935 1505;1506;1507;1508 1505 4 EEVGEEAIVELVENGK WVPSDKSGFEPASLKEEVGEEAIVELVENG EVGEEAIVELVENGKKVKVNKDDIQKMNPP K E E G K K 1 0 1 0 0 0 6 2 0 1 1 1 0 0 0 0 0 0 0 3 0 0 16 0 1742.8574 A0A024R1N1;A0A0U4BW16;P35579;Q86XU5;B1AH99;Q5BKV1;B4E3S1 A0A024R1N1 48 63 MYH9 Myosin-9 yes no 2 0.0006562 56.205 1 0.99187 1.1815 NaN 1 Median 0.99187 1.1815 NaN 1 0 Median NaN NaN NaN 0 0 Median 3078800 1584900 1493900 3078800 1584900 1493900 0 0 0 574 32 623 936 1509;1510 1509 2 EEVGINTETSSAERK FPGSEEICSSSKRSKEEVGINTETSSAERK EEVGINTETSSAERKRRLPVWFAKGSDTSK K E E R K R 1 1 1 0 0 0 4 1 0 1 0 1 0 0 0 2 2 0 0 1 0 0 15 1 1648.7904 Q59F09;Q14191 Q59F09 800 814 WRN Werner syndrome ATP-dependent helicase yes no 3 3.735E-07 75.564 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 575 812 624 937 1511 1511 1331;1332 0 EEYQLVQVEQK RAGRTGVCICFYQHKEEYQLVQVEQKAGIK YQHKEEYQLVQVEQKAGIKFKRIGVPSATE K E E Q K A 0 0 0 0 0 3 3 0 0 0 1 1 0 0 0 0 0 0 1 2 0 0 11 0 1391.6933 Q9NR30 Q9NR30 545 555 DDX21 Nucleolar RNA helicase 2 yes yes 2 0.0029709 81.099 1 0.34391 0.44793 NaN 1 Median NaN NaN NaN 0 0 Median 0.34391 0.44793 NaN 1 0 Median 6739900 5125000 1614900 0 0 0 6739900 5125000 1614900 576 934 625 938 1512 1512 1 EFAAALTAER KPCGPQCYQHLEGAKEFAAALTAERIKTPP LEGAKEFAAALTAERIKTPPKRPGGRRRGR K E F E R I 4 1 0 0 0 0 2 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 10 0 1077.5455 Q75MP9;F2YMM1;Q75MQ0;S4S3R8;A0A090N8E9;Q15910;B7Z8K5 Q75MP9 251 260 EZH2 Histone-lysine N-methyltransferase EZH2 yes no 2 0.0068887 55.261 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 577 209 626 939;940 1513;1514 1514 1812 0 EFNAEVHR PHSTKRFPGYDSESKEFNAEVHRKHIMGQN GYDSESKEFNAEVHRKHIMGQNVADYMRYL K E F H R K 1 1 1 0 0 0 2 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 8 0 1000.4726 A2RUM7;Q59GX9;P46777;B3KTM6 A2RUM7 189 196 RPL5 60S ribosomal protein L5 yes no 2;3 0.00011842 96.492 2 0.61816 0.84523 6.0059 2 Median NaN NaN NaN 0 0 Median 0.61816 0.84523 6.0059 2 0 Median 157930000 95365000 62561000 0 0 0 157930000 95365000 62561000 578 306 627 941;942 1515;1516;1517 1516 3 EFNAEVHRK PHSTKRFPGYDSESKEFNAEVHRKHIMGQN YDSESKEFNAEVHRKHIMGQNVADYMRYLM K E F R K H 1 1 1 0 0 0 2 0 1 0 0 1 0 1 0 0 0 0 0 1 0 0 9 1 1128.5676 A2RUM7;Q59GX9;P46777;B3KTM6 A2RUM7 189 197 RPL5 60S ribosomal protein L5 yes no 2;3 2.5584E-08 92.439 2 1 0.73649 0.95682 11.235 3 Median 0.752 0.97754 3.0309 2 0 Median 0.58564 0.80757 NaN 1 0 Median 120620000 68817000 51799000 107410000 61249000 46159000 13209000 7568400 5640300 579 306 628 943;944;945 1518;1519;1520;1521;1522;1523 1518 6 EFPITEAVGSDK RPSVKETLQKSGVRKEFPITEAVGSDKTNR VRKEFPITEAVGSDKTNRHPLECLPGLIQD K E F D K T 1 0 0 1 0 0 2 1 0 1 0 1 0 1 1 1 1 0 0 1 0 0 12 0 1291.6296 Q6P0N0;H0YJM1 Q6P0N0 851 862 MIS18BP1 Mis18-binding protein 1 yes no 2 1.5636E-05 92.039 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 580 858 629 946;947 1524;1525;1526;1527;1528;1529 1526 1420 0 EFVEAVLELR LKDDLGNTLEKKGGKEFVEAVLELRKKNGP KKGGKEFVEAVLELRKKNGPLEVAGAAVSA K E F L R K 1 1 0 0 0 0 3 0 0 0 2 0 0 1 0 0 0 0 0 2 0 0 10 0 1203.6499 O75367;Q59FH0;B4DJC3 O75367 240 249 H2AFY Core histone macro-H2A.1;Histone H2A yes no 2 2.9144E-08 116.3 2 0.70537 0.96482 NaN 1 Median NaN NaN NaN 0 0 Median 0.70537 0.96482 NaN 1 0 Median 41842000 30515000 11327000 0 0 0 41842000 30515000 11327000 581 709 630 948;949 1530;1531 1530 2 EGEDSSVIHYDDK ELFKDEATDGGGDNKEGEDSSVIHYDDKAI NKEGEDSSVIHYDDKAIERLLDRNQDETED K E G D K A 0 0 0 3 0 0 2 1 1 1 0 1 0 0 0 2 0 0 1 1 0 0 13 0 1492.6318 B3KY63;F5GWX5;A0A0C4DGG9;Q14839 B3KY63 1214 1226 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 3 0.0011833 55.841 1 1.1617 1.4455 NaN 1 Median NaN NaN NaN 0 0 Median 1.1617 1.4455 NaN 1 0 Median 31217000 15213000 16004000 0 0 0 31217000 15213000 16004000 582 244 631 950 1532 1532 1 EGGTASVATGPDSPSPVPLPPGK GSGTRQVFSMAAMNKEGGTASVATGPDSPS TGPDSPSPVPLPPGKPALPGADGTPFGCPP K E G G K P 2 0 0 1 0 0 1 4 0 0 1 1 0 0 6 3 2 0 0 2 0 0 23 0 2117.0641 Q6SPF0;E9PIW9;F8WDT5 Q6SPF0 413 435 SAMD1 Atherin yes no 2 3.6051E-10 50.843 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 583 863 632 951 1533 1533 1433;1434 0 EGIVKQDSLVINLNR VQKRYKTREAEEKEKEGIVKQDSLVINLNR EGIVKQDSLVINLNRSNPKLKDLYIRPNIA K E G N R S 0 1 2 1 0 1 1 1 0 2 2 1 0 0 0 1 0 0 0 2 0 0 15 1 1696.9472 Q9Y5B9 Q9Y5B9 643 657 SUPT16H FACT complex subunit SPT16 yes yes 2 7.7493E-18 110.84 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 584 967 633 952 1534;1535 1534 1752 0 EGKEEAEETNVLPK GLSEEDDSLVDVYYREGKEEAEETNVLPKE REGKEEAEETNVLPKEKQTKPAEAPRLQLS R E G P K E 1 0 1 0 0 0 5 1 0 0 1 2 0 0 1 0 1 0 0 1 0 0 14 1 1571.7679 Q14690;B4DH82 Q14690 1506 1519 PDCD11 Protein RRP5 homolog yes no 3 0.018827 23.831 1 0.6782 0.8475 NaN 1 Median NaN NaN NaN 0 0 Median 0.6782 0.8475 NaN 1 0 Median 13289000 6565400 6723600 0 0 0 13289000 6565400 6723600 585 816 634 953 1536 1536 0 EGLELPEDEEEK QLKEFDGKSLVSVTKEGLELPEDEEEKKKM VTKEGLELPEDEEEKKKMEESKAKFENLCK K E G E K K 0 0 0 1 0 0 6 1 0 0 2 1 0 0 1 0 0 0 0 0 0 0 12 0 1415.6304 Q2VPJ6;K9JA46;P07900;Q8TBA7;Q86U12;O75322;Q58FF6;Q96HX7;Q58FG0;A0A024RD80;P08238;B4DMA2;B4DGL0;Q58FF7;Q9H6X9;A8K3W9 A0A024RD80 539 550 HSP90AA1;EL52;HSP90AB4P;HSP90AA5P;HSP90AB1;HSP90AB3P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-beta 4;Putative heat shock protein HSP 90-alpha A5;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 no no 2 0.0039124 54.539 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 4706300 0 4706300 0 0 0 4706300 0 4706300 586 167;688 635 954 1537 1537 1 EGPEPPEEVPPPTTPPVPK GSFEASPVEPQLPSKEGPEPPEEVPPPTTP PPEEVPPPTTPPVPKVEPKGDGIGPTRQPP K E G P K V 0 0 0 0 0 0 4 1 0 0 0 1 0 0 9 0 2 0 0 2 0 0 19 0 1993.0044 P48634 P48634 597 615 PRRC2A Protein PRRC2A yes yes 2 9.4332E-52 132.81 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 587 766 636 955 1538 1538 1983 0 EGQAGSPEKPLSDLGR YGRFLIDFSYLLSKREGQAGSPEKPLSDLG GQAGSPEKPLSDLGRLSYMAYWKSVILECL R E G G R L 1 1 0 1 0 1 2 3 0 0 2 1 0 0 2 2 0 0 0 0 0 0 16 1 1639.8166 A5PKX7;Q92794;A5PLL3;C9K0F9;A7E2B6;B2RWN8;Q8WYB5 A5PKX7 673 688 MYST3;KAT6A;MYST4;KAT6B Histone acetyltransferase;Histone acetyltransferase KAT6A;Histone acetyltransferase KAT6B no no 2 2.9223E-89 152.37 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 588 321;421 637 956 1539;1540 1539 487 0 EGRPSGEAFVELESEDEVK KIQNGAQGIRFIYTREGRPSGEAFVELESE SGEAFVELESEDEVKLALKKDRETMGHRYV R E G V K L 1 1 0 1 0 0 6 2 0 0 1 1 0 1 1 2 0 0 0 2 0 0 19 1 2105.9753 E9PCY7;G8JLB6;P31943;D6RBM0;E7EQJ0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;E7EN40;D6RIU0;D6RDU3;D6RJ04;D6RIH9;D6RDL0 E9PCY7 50 68 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 3 8.9318E-12 85.013 3 0.30914 0.39437 NaN 1 Median 0.30914 0.39437 NaN 1 0 Median NaN NaN NaN 0 0 Median 7210500 4977400 2233100 7210500 4977400 2233100 0 0 0 589 614 638;639 957;958;959 1541;1542;1543;1544 1541 928;929 1 EGRPSGEAFVELESEEEVK KIQNGTSGIRFIYTREGRPSGEAFVELESE SGEAFVELESEEEVKLALKKDRETMGHRYV R E G V K L 1 1 0 0 0 0 7 2 0 0 1 1 0 1 1 2 0 0 0 2 0 0 19 1 2119.991 P55795;B4DP00;B4DFK9 P55795 50 68 HNRNPH2 Heterogeneous nuclear ribonucleoprotein H2 yes no 3 1.3036E-05 40.952 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 590 780 640 960 1545 1545 1262 0 EGSEFSFSDGEVAEK LLHPLGPDDKNIETKEGSEFSFSDGEVAEK EGSEFSFSDGEVAEKAEVYRSENESERNCL K E G E K A 1 0 0 1 0 0 4 2 0 0 0 1 0 2 0 3 0 0 0 1 0 0 15 0 1616.6842 Q9NVB0;Q9BVS4 Q9NVB0 22 36 RIOK2 Serine/threonine-protein kinase RIO2 yes no 2 7.0676E-06 63.29 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 591 920 641;642 961;962 1546;1547 1547 1600;1601;1602 0 EGTSVLEHTSDGFPENK TLGMMDMLFATMRRKEGTSVLEHTSDGFPE TSVLEHTSDGFPENKKIES___________ K E G N K K 0 0 1 1 0 0 3 2 1 0 1 1 0 1 1 2 2 0 0 1 0 0 17 0 1845.8381 H0Y8P4;Q8TED0 H0Y8P4 525 541 UTP15 U3 small nucleolar RNA-associated protein 15 homolog yes no 3 0.015616 20.368 1 0.70943 0.89319 NaN 1 Median NaN NaN NaN 0 0 Median 0.70943 0.89319 NaN 1 0 Median 10278000 6251800 4026000 0 0 0 10278000 6251800 4026000 592 651 643 963 1548 1548 1 EGVEHQLRR FIVALKVLFKSQIEKEGVEHQLRREIEIQA KSQIEKEGVEHQLRREIEIQAHLHHPNILR K E G R R E 0 2 0 0 0 1 2 1 1 0 1 0 0 0 0 0 0 0 0 1 0 0 9 1 1122.5894 J3QR41;J3KTD6;J3QLN8;Q96GD4;J3KT86;B2RC06 J3QR41 75 83 AURKB Aurora kinase B yes no 3 0.014148 32.415 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 5717300 5717300 0 0 0 0 5717300 5717300 0 593 681 644 964;965 1549;1550 1550 2 EGVVGPELHHK DPVRNRRLTVNEAVKEGVVGPELHHKLLSA EAVKEGVVGPELHHKLLSAERAVTGYKDPY K E G H K L 0 0 0 0 0 0 2 2 2 0 1 1 0 0 1 0 0 0 0 2 0 0 11 0 1200.6251 Q15149;D3DWL0 Q15149 2893 2903 PLEC;PLEC1 Plectin yes no 3 0.019947 29.299 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2301000 2301000 0 2301000 2301000 0 0 0 0 594 822 645 966 1551 1551 1 EHALLAYTLGVK VGEFEAGISKNGQTREHALLAYTLGVKQLI QTREHALLAYTLGVKQLIVGVNKMDSTEPP R E H V K Q 2 0 0 0 0 0 1 1 1 0 3 1 0 0 0 0 1 0 1 1 0 0 12 0 1313.7343 A0A087WV01;Q9H2I7;Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q53GE9;Q53GA1;Q53G85;Q5VTE0;P68104;A9X7H1;Q96RE1;Q16577;B4DV42;Q9NZS6;A8K9C4;Q05639;Q59GP5;Q8IUB0;Q53HR1;Q53G89 A0A087WV01 135 146 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 yes no 2 1.1152E-20 143.5 1 3.8877 4.8354 NaN 1 Median NaN NaN NaN 0 0 Median 3.8877 4.8354 NaN 1 0 Median 30690000 6888600 23801000 0 0 0 30690000 6888600 23801000 595 186 646 967 1552;1553 1552 2 EHAPLASPVENK PGEKPLGVNKVAKPKEHAPLASPVENKEVY KPKEHAPLASPVENKEVYQCRLCNAKLSSL K E H N K E 2 0 1 0 0 0 2 0 1 0 1 1 0 0 2 1 0 0 0 1 0 0 12 0 1290.6568 Q5H9S0;B4DTN6;Q9ULJ3 Q5H9S0 708 719 DKFZp781N1974;ZBTB21 Zinc finger and BTB domain-containing protein 21 yes no 2 0.00025517 88.42 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 596 499 647 968;969 1554;1555;1556;1557 1557 733 0 EHFSFSPR VIKYLSRNVVHSVRREHFSFSPRMPVGDFF VVHSVRREHFSFSPRMPVGDFFEERDTPEG R E H P R M 0 1 0 0 0 0 1 0 1 0 0 0 0 2 1 2 0 0 0 0 0 0 8 0 1005.4668 J3QK86;J3KPG5;F8VU39;Q9UIF9;H0YII3 J3QK86 576 583 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A yes no 2 1.3561E-05 98.044 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 597 636 648 970;971 1558;1559;1560;1561;1562 1559 967 0 EHGAFDAVK TDTESELDLISRLSREHGAFDAVKCTHWAE ISRLSREHGAFDAVKCTHWAEGGKGALALA R E H V K C 2 0 0 1 0 0 1 1 1 0 0 1 0 1 0 0 0 0 0 1 0 0 9 0 972.46649 A0A024R652;F5H2F4;B7Z809;P11586 A0A024R652 776 784 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 2 9.6607E-05 71.491 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3502400 0 3502400 0 0 0 3502400 0 3502400 598 79 649 972 1563 1563 1 EHIEDFK TVKKILSDIGLEYCKEHIEDFKQFEPNDFY DIGLEYCKEHIEDFKQFEPNDFYLKNTTWE K E H F K Q 0 0 0 1 0 0 2 0 1 1 0 1 0 1 0 0 0 0 0 0 0 0 7 0 916.42905 Q6DHZ8;B2RBM8;Q9H2P0;E9PQK8 Q6DHZ8 33 39 ADNP Activity-dependent neuroprotector homeobox protein yes no 2 3.7672E-17 116.88 1 1.065 1.3383 NaN 1 Median NaN NaN NaN 0 0 Median 1.065 1.3383 NaN 1 0 Median 50858000 24794000 26063000 0 0 0 50858000 24794000 26063000 599 413 650 973 1564;1565 1565 2 EHLLLAR ILVVAANDGPMPQTREHLLLARQIGVEHVV DGPMPQTREHLLLARQIGVEHVVVYVNKAD R E H A R Q 1 1 0 0 0 0 1 0 1 0 3 0 0 0 0 0 0 0 0 0 0 0 7 0 850.50249 P49411 P49411 163 169 TUFM Elongation factor Tu, mitochondrial yes yes 2 0.022853 79.454 1 4.8619 6.3232 NaN 1 Median NaN NaN NaN 0 0 Median 4.8619 6.3232 NaN 1 0 Median 22997000 3196400 19800000 0 0 0 22997000 3196400 19800000 600 767 651 974 1566 1566 1 EHQEFLTK NRKNELEQLKEAFAKEHQEFLTKLAFAEER LKEAFAKEHQEFLTKLAFAEERNQNLMLEL K E H T K L 0 0 0 0 0 1 2 0 1 0 1 1 0 1 0 0 1 0 0 0 0 0 8 0 1030.5084 P49454 P49454 1081 1088 CENPF Centromere protein F yes yes 2 0.015824 58.23 1 1.5692 2.0176 NaN 1 Median NaN NaN NaN 0 0 Median 1.5692 2.0176 NaN 1 0 Median 7175800 3643500 3532300 0 0 0 7175800 3643500 3532300 601 768 652 975 1567 1567 1 EHSLQVSPSLEK PPMQLGFPSLHSFIKEHSLQVSPSLEKGAK FIKEHSLQVSPSLEKGAKADTGLDDDIENE K E H E K G 0 0 0 0 0 1 2 0 1 0 2 1 0 0 1 3 0 0 0 1 0 0 12 0 1352.6936 O95235 O95235 526 537 KIF20A Kinesin-like protein KIF20A yes yes 2 0 264.97 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 602 716 653;654 976;977;978;979 1568;1569;1570;1571;1572;1573;1574;1575 1573 1075;1076 0 EHTALLK KAIFAGYKRGLRNQREHTALLKIEGVYARD KRGLRNQREHTALLKIEGVYARDETEFYLG R E H L K I 1 0 0 0 0 0 1 0 1 0 2 1 0 0 0 0 1 0 0 0 0 0 7 0 810.45995 F8WBS5;F8WB72;C9K025;P18077 F8WBS5 23 29 RPL35A 60S ribosomal protein L35a yes no 2 1.3758E-05 99.139 1 1 0.58186 0.71659 13.011 2 Median 0.65315 0.78564 NaN 1 0 Median 0.51836 0.6536 NaN 1 0 Median 91723000 58536000 33186000 9959200 5909600 4049600 81763000 52627000 29137000 603 567 655 980;981 1576;1577;1578;1579 1579 4 EHVDVIAK SHRVLQRALECLPSKEHVDVIAKFAQLEFQ LECLPSKEHVDVIAKFAQLEFQLGDAERAK K E H A K F 1 0 0 1 0 0 1 0 1 1 0 1 0 0 0 0 0 0 0 2 0 0 8 0 909.49198 Q14690 Q14690 1759 1766 PDCD11 Protein RRP5 homolog yes yes 2 2.0287E-49 138.83 1 0.64497 0.82577 NaN 1 Median NaN NaN NaN 0 0 Median 0.64497 0.82577 NaN 1 0 Median 17796000 9904500 7891800 0 0 0 17796000 9904500 7891800 604 816 656 982 1580;1581 1581 2 EHVEEISELFYDAK ANLLAKINGKDSIEKEHVEEISELFYDAKS KEHVEEISELFYDAKSSAKILADQQDKYMK K E H A K S 1 0 0 1 0 0 4 0 1 1 1 1 0 1 0 1 0 0 1 1 0 0 14 0 1707.7992 B5BUB1;Q9Y265;H7C4G5 B5BUB1 428 441 RUVBL1 RuvB-like 1 yes no 2;3 3.7324E-219 197.07 1 2 0.94342 1.1885 35.399 3 Plateau 0.5101 0.63635 NaN 1 0 Median 0.93447 1.1744 1.6844 2 0 Median 225750000 118310000 107440000 4751600 3413100 1338500 221000000 114890000 106100000 605 530 657 983;984;985 1582;1583;1584;1585;1586;1587 1584 6 EHVIEALR IGQVIMSIRTKLQNKEHVIEALRRAKFKFP RTKLQNKEHVIEALRRAKFKFPGRQKIHIS K E H L R R 1 1 0 0 0 0 2 0 1 1 1 0 0 0 0 0 0 0 0 1 0 0 8 0 965.52943 F8W7C6;A0A087WV22;X1WI28;X5D2T3;P27635;X5D7P1;H7C123;H7C2C5 F8W7C6 95 102 RPL10 60S ribosomal protein L10 yes no 2 1.2038E-07 102.41 1 0.60554 0.85003 NaN 1 Median NaN NaN NaN 0 0 Median 0.60554 0.85003 NaN 1 0 Median 90719000 56890000 33829000 0 0 0 90719000 56890000 33829000 606 187 658 986 1588;1589 1589 2 EHVIEALRR IGQVIMSIRTKLQNKEHVIEALRRAKFKFP TKLQNKEHVIEALRRAKFKFPGRQKIHISK K E H R R A 1 2 0 0 0 0 2 0 1 1 1 0 0 0 0 0 0 0 0 1 0 0 9 1 1121.6305 F8W7C6;A0A087WV22;X1WI28;X5D2T3;P27635;X5D7P1;H7C123;H7C2C5 F8W7C6 95 103 RPL10 60S ribosomal protein L10 yes no 2;3 1.0067E-08 117.04 2 4 0.86517 1.0828 16.655 4 Linear 0.77033 1.0038 1.7753 2 0 Median 0.48938 0.75726 5.9005 2 0 Median 96898000 54961000 41937000 67278000 39296000 27982000 29620000 15665000 13955000 607 187 659 987;988;989;990;991;992 1590;1591;1592;1593;1594;1595;1596;1597;1598;1599;1600 1592 11 EIAIVHSDAEK HNDVEIEEAGEEEEKEIAIVHSDAEKEQEE EEEKEIAIVHSDAEKEQEEEEQKQEMEVKM K E I E K E 2 0 0 1 0 0 2 0 1 2 0 1 0 0 0 1 0 0 0 1 0 0 11 0 1210.6194 B4E392;B4DTD4;A8K964;Q9H307 B4E392 61 71 PNN Pinin yes no 2 0.00038703 73.466 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 608 377 660 993;994 1601;1602 1601 574 0 EIAIVHSDAEKEQEEEEQK HNDVEIEEAGEEEEKEIAIVHSDAEKEQEE VHSDAEKEQEEEEQKQEMEVKMEEETEVRE K E I Q K Q 2 0 0 1 0 2 7 0 1 2 0 2 0 0 0 1 0 0 0 1 0 0 19 1 2240.0445 B4E392;B4DTD4;A8K964;Q9H307 B4E392 61 79 PNN Pinin yes no 3 1.1676E-11 83.905 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 609 377 661 995 1603;1604 1604 574 0 EIAQDFK TELLIRKLPFQRLVREIAQDFKTDLRFQSA LPFQRLVREIAQDFKTDLRFQSAAIHAKRV R E I F K T 1 0 0 1 0 1 1 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 7 0 849.42323 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;A8K4Y7;K7ES00;Q6TXQ4 B4E380 74 80 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1 yes no 2 0.00072587 88.029 3 3 0.71169 0.86578 10.709 4 Median 0.75783 0.89172 NaN 1 0 Median 0.66836 0.84059 13.08 3 0 Median 889510000 520070000 369450000 241030000 135740000 105290000 648490000 384330000 264160000 610 399 662 996;997;998;999;1000;1001 1605;1606;1607;1608;1609;1610;1611;1612;1613;1614;1615;1616;1617 1611 13 EIAQDFKTDLR TELLIRKLPFQRLVREIAQDFKTDLRFQSA RLVREIAQDFKTDLRFQSAAIHAKRVTIMP R E I L R F 1 1 0 2 0 1 1 0 0 1 1 1 0 1 0 0 1 0 0 0 0 0 11 1 1334.683 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;K7EMV3;B4DEB1;B2R6Y1;A8K4Y7;K7ES00;Q6TXQ4 B4E380 74 84 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1 yes no 2;3 0.0030423 59.067 1 2 0.78346 1.2383 21.07 3 Plateau 0.67349 0.85297 NaN 1 0 Median 0.78492 1.2283 1.1449 2 0 Median 175500000 102510000 72990000 6017000 3151500 2865500 169480000 99359000 70124000 611 399 663 1002;1003;1004 1618;1619;1620;1621;1622 1621 5 EIAQEFKTDLR TELLIRKLPFQRLVREIAQEFKTDLRFQSS RLVREIAQEFKTDLRFQSSAVMALQEAREA R E I L R F 1 1 0 1 0 1 2 0 0 1 1 1 0 1 0 0 1 0 0 0 0 0 11 1 1348.6987 Q5TEC6 Q5TEC6 74 84 HIST2H3PS2 Histone H3 yes yes 2;3 8.1453E-13 122.57 2 4 0.50627 0.80517 8.1347 6 Median 0.63164 0.82028 2.1854 2 0 Median 0.47077 0.76083 9.1937 4 0 Median 1531200000 996910000 534290000 145040000 90057000 54984000 1386200000 906850000 479310000 612 849 664 1005;1006;1007;1008;1009;1010 1623;1624;1625;1626;1627;1628;1629;1630;1631;1632;1633;1634;1635;1636 1632 14 EIEEESETTVEADLTDK ______________________________ EEESETTVEADLTDKQKHQLKHRELFLSRQ K E I D K Q 1 0 0 2 0 0 6 0 0 1 1 1 0 0 0 1 3 0 0 1 0 0 17 0 1936.8637 D6W5A2;E7EV10;Q9BTC8;E7EQY4;Q53RX8;E9PCS8 D6W5A2 9 25 MTA3;tmp_locus_6 Metastasis-associated protein MTA3 yes no 2 4.6428E-08 71.558 1 0.55388 0.66034 NaN 1 Median 0.55388 0.66034 NaN 1 0 Median NaN NaN NaN 0 0 Median 6964200 4485900 2478300 6964200 4485900 2478300 0 0 0 613 601 665 1011 1637;1638 1637 2 EIEESKEPGVEDTEWSNTQTEEAIQTR ______________________________ TEWSNTQTEEAIQTRSEESQGAIHRSMSQP K E I T R S 1 1 1 1 0 2 8 1 0 2 0 1 0 0 1 2 4 1 0 1 0 0 27 1 3134.4164 H0YJF7;A8K245;Q99986 H0YJF7 6 32 VRK1 Serine/threonine-protein kinase VRK1 yes no 3 0.00085299 24.907 1 1 0.60204 0.81391 67.048 2 Median 1.0108 1.3076 NaN 1 0 Median 0.35858 0.50661 NaN 1 0 Median 27851000 16793000 11058000 12281000 5927200 6353500 15570000 10866000 4704200 614 344 666 1012;1013 1639;1640 1640 2 EIEGEEIEIVLAKPPDK ______________________________ EGEEIEIVLAKPPDKKRKERQAARQASRST K E I D K K 1 0 0 1 0 0 5 1 0 3 1 2 0 0 2 0 0 0 0 1 0 0 17 1 1908.0092 Q7Z334;B4DMD1;B4DT28;B4DMB1;Q0VGD6;Q6MZS5;B2R7W4;O43390 Q7Z334 8 24 DKFZp686O0665;HNRNPR;HNRPR;DKFZp686A13234 Heterogeneous nuclear ribonucleoprotein R yes no 3 0.027936 17.558 1 1.6368 2.0358 NaN 1 Median NaN NaN NaN 0 0 Median 1.6368 2.0358 NaN 1 0 Median 11413000 4183400 7229500 0 0 0 11413000 4183400 7229500 615 406 667 1014 1641 1641 0 EIEHLSR KEERSSYLEYQKVMREIEHLSRLYIAYQFL LEYQKVMREIEHLSRLYIAYQFLLAEDTKV R E I S R L 0 1 0 0 0 0 2 0 1 1 1 0 0 0 0 1 0 0 0 0 0 0 7 0 882.45593 B7ZLZ7;A0A024R158;O95347;A8K984;B3KMB1;Q2KQ72;Q05BV1;Q6IPS5;Q7Z2X1;A0JLM9;Q32Q15;Q5T821;Q05D74 B7ZLZ7 226 232 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 yes no 2 0.027295 47.849 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1735200 1735200 0 1735200 1735200 0 0 0 0 616 27 668 1015 1642 1642 1 EIERPFETYK QKATLLQQRREGEMKEIERPFETYKENIEL EGEMKEIERPFETYKENIELKENDEKMKAM K E I Y K E 0 1 0 0 0 0 3 0 0 1 0 1 0 1 1 0 1 0 1 0 0 0 10 1 1310.6507 P46013 P46013 924 933 MKI67 Antigen KI-67 yes yes 2;3 0.0007478 73.887 3 0.86557 1.3238 1.3198 2 Median NaN NaN NaN 0 0 Median 0.86557 1.3238 1.3198 2 0 Median 73236000 38576000 34659000 0 0 0 73236000 38576000 34659000 617 762 669 1016;1017;1018 1643;1644;1645;1646 1644 4 EIESEIDSEEELINK ESALKRSELVNWYLKEIESEIDSEEELINK EIESEIDSEEELINKKRIIEKVIHRLTHYD K E I N K K 0 0 1 1 0 0 6 0 0 3 1 1 0 0 0 2 0 0 0 0 0 0 15 0 1775.8313 Q4ZG57;Q14566 Q4ZG57 719 733 MCM6 DNA replication licensing factor MCM6 yes no 2 1.4959E-06 79.633 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 618 813 670 1019 1647 1647 1333 0 EIETYHNLLEGGQEDFESSGAGK QEYSLLLSIKMRLEKEIETYHNLLEGGQED LEGGQEDFESSGAGKIGLGGRGGSGGSYGR K E I G K I 1 0 1 1 0 1 5 4 1 1 2 1 0 1 0 2 1 0 1 0 0 0 23 0 2509.1245 CON__P35527;P35527;K7EQQ3 CON__P35527 450 472 KRT9 Keratin, type I cytoskeletal 9 yes no 3 1.0084E-19 70.917 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 403630000 403630000 0 192940000 192940000 0 210680000 210680000 0 + 619 582 671 1020;1021 1648;1649;1650;1651 1648 4 EIKLSDDFDSPVK KLKNDQQAKIPLKKREIKLSDDFDSPVKGP KREIKLSDDFDSPVKGPLCKSVTPTKEFLK R E I V K G 0 0 0 3 0 0 1 0 0 1 1 2 0 1 1 2 0 0 0 1 0 0 13 1 1491.7457 Q96T23;H0YER1;H0YCN2 Q96T23 388 400 RSF1 Remodeling and spacing factor 1 yes no 2 3.8403E-103 160.64 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 620 910 672 1022;1023 1652;1653;1654;1655;1656 1653 1564;1565 0 EILSPLFPR ALLLTEHSKKHLQEREILSPLFPRNGTKSP KHLQEREILSPLFPRNGTKSPEAATPVGKV R E I P R N 0 1 0 0 0 0 1 0 0 1 2 0 0 1 2 1 0 0 0 0 0 0 9 0 1070.6124 Q5VWN6 Q5VWN6 672 680 FAM208B Protein FAM208B yes yes 2 0.0035859 53.327 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 621 852 673 1024 1657 1657 1404 0 EINDCIGGTVLNISK KVPVSVNLLSKNLSREINDCIGGTVLNISK EINDCIGGTVLNISKSGSCSAIRIGHVGMQ R E I S K S 0 0 2 1 1 0 1 2 0 3 1 1 0 0 0 1 1 0 0 1 0 0 15 0 1631.8189 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87 O76021 193 207 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 2 1.4976E-06 70.806 1 1 0.43815 0.53665 73.486 2 Median 0.74382 0.90232 NaN 1 0 Median 0.2581 0.31917 NaN 1 0 Median 29306000 21895000 7411000 3441900 1820300 1621600 25865000 20075000 5789400 622 712 674 1025;1026 1658;1659;1660 1660 3 EIPSATQSPISK TLGVQRPKLEKKDAKEIPSATQSPISKKRK DAKEIPSATQSPISKKRKKKGFLPETKKRK K E I S K K 1 0 0 0 0 1 1 0 0 2 0 1 0 0 2 3 1 0 0 0 0 0 12 0 1256.6612 Q9BQG0;I3L1L3;B4DE42 Q9BQG0 1156 1167 MYBBP1A Myb-binding protein 1A yes no 2 4.4968E-10 106.17 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 623 914 675;676 1027;1028;1029 1661;1662;1663;1664;1665;1666;1667;1668 1663 1575;1576 0 EIQTAVR SRLAHYNKRSTITSREIQTAVRLLLPGELA KRSTITSREIQTAVRLLLPGELAKHAVSEG R E I V R L 1 1 0 0 0 1 1 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 7 0 815.45012 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;P57053;Q96A08;A0A024RCJ2;Q16778;P33778;P23527;P06899 A0A024RCJ2 94 100 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS;HIST1H2BA;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J no no 2 0.029846 64.776 1 0.56311 0.78169 NaN 1 Median NaN NaN NaN 0 0 Median 0.56311 0.78169 NaN 1 0 Median 65020000 40408000 24612000 0 0 0 65020000 40408000 24612000 624 10;158 677 1030 1669;1670 1669 2 EISDDEAEEEKGEKEEEDKDDEEKPK IGYPITLYLEKEREKEISDDEAEEEKGEKE GEKEEEDKDDEEKPKIEDVGSDEEDDSGKD K E I P K I 1 0 0 5 0 0 11 1 0 1 0 5 0 0 1 1 0 0 0 0 0 0 26 4 3078.3161 A0A024RD80;P08238;B4DMA2;B4DGL0;Q6PK50;Q58FF7 A0A024RD80 224 249 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 4 3.9864E-24 84.68 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 625 167 678 1031 1671 1671 230 0 EISPGSGPGEIR VGKDERVITEEMNGKEISPGSGPGEIRKVE NGKEISPGSGPGEIRKVEPVTQKDSTSLSS K E I I R K 0 1 0 0 0 0 2 3 0 2 0 0 0 0 2 2 0 0 0 0 0 0 12 0 1197.599 Q9H1C6;E9PMG5;E9PMV8;B4DJ76;H0Y5B0;Q6R5J7;E9PK52;E9PHY5;O43491 Q9H1C6 91 102 EPB41L2 Band 4.1-like protein 2 yes no 2 0.0019711 60.518 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 626 471 679 1032 1672 1672 677 0 EITALAPSTMK GGTTMYPGIADRMQKEITALAPSTMKIKII RMQKEITALAPSTMKIKIIAPPERKYSVWI K E I M K I 2 0 0 0 0 0 1 0 0 1 1 1 1 0 1 1 2 0 0 0 0 0 11 0 1160.6111 P63261;B4E3A4;Q8WVW5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4DVQ0;B4E335;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;B3KUD3;B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;B4DUI8;A8K3K1;Q96DE1;Q96FU6;Q7Z7J6;A6NL76;Q13707;F1BXA6;A4UCT3;A5GZ75;B3KPP5;Q9UE89 P63261 316 326 ACTG1;PS1TP5BP1;ACTB;ACTA2;ACTG2;ACTA1;ACTC1 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle yes no 2 0.025574 43.308 1 3.3383 4.2551 NaN 1 Median NaN NaN NaN 0 0 Median 3.3383 4.2551 NaN 1 0 Median 10864000 3137100 7727100 0 0 0 10864000 3137100 7727100 627 794 680 1033 1673 1673 186 1 EITSHEEGGGDVSPRKEPQEPEVCPTK DVQLPREDNPEEPSKEITSHEEGGGDVSPR SPRKEPQEPEVCPTKIKPNLSSSPRSEETT K E I T K I 0 1 0 1 1 1 6 3 1 1 0 2 0 0 4 2 2 0 0 2 0 0 27 2 2991.388 A0A1B0GUH9;A0PJI9;A0A1P0AZG4 A0A1B0GUH9 543 569 C10orf12 yes no 4 1.2524E-18 62.302 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 628 286 681 1034 1674 1674 429 0 EIVHLQAGQCGNQIGAK ______________________________ VHLQAGQCGNQIGAKFWEVISDEHGIDPTG R E I A K F 2 0 1 0 1 3 1 3 1 2 1 1 0 0 0 0 0 0 0 1 0 0 17 0 1821.9156 B4DJ43;Q8N6N5;Q8IZ29;Q8IWP6;P04350;P68371;M0R2D3;B4DFH6;M0R0X0;M0R2T4;M0QY85;M0QY37;M0QX14;M0R042;M0QZL7;M0QYM7;M0R278;B4DNW1 B4DJ43 3 19 TUBB2C;TUBB4A;TUBB4B Tubulin beta-4A chain;Tubulin beta-4B chain yes no 3 2.8588E-16 106.42 2 0.43286 0.52782 NaN 1 Median 0.43286 0.52782 NaN 1 0 Median NaN NaN NaN 0 0 Median 34159000 24354000 9805200 34159000 24354000 9805200 0 0 0 629 469 682 1035;1036 1675;1676;1677 1675 3 EIVNNIRR IGTGWSCKIPNFDVREIVNNIRRLMDGEEP IPNFDVREIVNNIRRLMDGEEPLPMLPSYK R E I R R L 0 2 2 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 0 1 0 0 8 1 1012.5778 P11388 P11388 871 878 TOP2A DNA topoisomerase 2-alpha yes yes 3 0.0019104 56.011 1 0.72162 1.2406 NaN 1 Median NaN NaN NaN 0 0 Median 0.72162 1.2406 NaN 1 0 Median 40921000 23794000 17127000 0 0 0 40921000 23794000 17127000 630 734 683 1037 1678;1679 1679 2 EKAEALEDLVGFK LGNLPGSKRQPQTPKEKAEALEDLVGFKEL PKEKAEALEDLVGFKELFQTPGHTEESMTD K E K F K E 2 0 0 1 0 0 3 1 0 0 2 2 0 1 0 0 0 0 0 1 0 0 13 1 1447.7559 P46013 P46013 2429 2441 MKI67 Antigen KI-67 yes yes 2 1.5249E-14 108.98 1 0.94447 1.1506 NaN 1 Median NaN NaN NaN 0 0 Median 0.94447 1.1506 NaN 1 0 Median 31509000 15482000 16027000 0 0 0 31509000 15482000 16027000 631 762 684 1038 1680;1681 1681 2 EKDSPFKPK SKKKQAGRPKGSKGKEKDSPFKPKLYKGDR KGSKGKEKDSPFKPKLYKGDRGLPLEGSAK K E K P K L 0 0 0 1 0 0 1 0 0 0 0 3 0 1 2 1 0 0 0 0 0 0 9 2 1074.571 B4DLF8;A0A024R9B5;B4DMM7;Q15291 B4DLF8 367 375 RBBP5 Retinoblastoma-binding protein 5 yes no 2 0.0096448 43.308 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 632 112 685 1039 1682 1682 164 0 EKGSFSDTGLGDGK DKEQKQTNTDKEKIKEKGSFSDTGLGDGKM KEKGSFSDTGLGDGKMKSDSFAPKTDSEKP K E K G K M 0 0 0 2 0 0 1 4 0 0 1 2 0 1 0 2 1 0 0 0 0 0 14 1 1396.647 Q9Y2W1 Q9Y2W1 374 387 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 0.012103 53.403 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 633 963 686 1040 1683 1683 1738;1739 0 EKPDSDDDLDIASLVTAK PHEALRCRVIKSSGREKPDSDDDLDIASLV DSDDDLDIASLVTAKLVNTTITPEPEPKPQ R E K A K L 2 0 0 5 0 0 1 0 0 1 2 2 0 0 1 2 1 0 0 1 0 0 18 1 1930.9371 A0A024RAC0;Q86V48 A0A024RAC0 655 672 LUZP1 Leucine zipper protein 1 yes no 2 1.038E-05 59.185 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 634 127 687 1041 1684;1685 1684 180 0 EKQDEQVGLPGK DLATFIEELEAVEAKEKQDEQVGLPGKGGK EAKEKQDEQVGLPGKGGKAKGKKTQMAEVL K E K G K G 0 0 0 1 0 2 2 2 0 0 1 2 0 0 1 0 0 0 0 1 0 0 12 1 1326.6779 P11388 P11388 1185 1196 TOP2A DNA topoisomerase 2-alpha yes yes 2;3 0.0021136 81.338 2 3 0.79588 0.96997 15.432 5 Median 0.99413 1.2182 6.938 2 0 Median 0.77829 0.95386 5.2372 3 0 Median 93189000 47876000 45313000 15780000 7899500 7880400 77409000 39977000 37432000 635 734 688 1042;1043;1044;1045;1046 1686;1687;1688;1689;1690;1691;1692 1686 7 EKTPELPEPSVK HRTKSRSPSPAPEKKEKTPELPEPSVKVKE EKKEKTPELPEPSVKVKEPSVQEATSTSDI K E K V K V 0 0 0 0 0 0 3 0 0 0 1 2 0 0 3 1 1 0 0 1 0 0 12 1 1352.7187 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3;M0R088;E9PCT1;B4DED5 A0A0S2Z4W1 218 229 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.00049942 67.997 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 636 266 689 1047 1693;1694 1694 1823 0 EKVEELIK DFNYILNMSLWSLTKEKVEELIKQRDAKGR SLWSLTKEKVEELIKQRDAKGREVNDLKRK K E K I K Q 0 0 0 0 0 0 3 0 0 1 1 2 0 0 0 0 0 0 0 1 0 0 8 1 986.56481 Q02880;Q71UH4;Q59H80;B4DLV2;Q8WTY5;B4DKD0;B7ZB27;Q6W6M6 Q02880 1157 1164 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 2 0.0084215 85.161 1 0.56175 0.69176 NaN 1 Median NaN NaN NaN 0 0 Median 0.56175 0.69176 NaN 1 0 Median 21583000 13324000 8259000 0 0 0 21583000 13324000 8259000 637 796 690 1048 1695 1695 1 EKVEPEVLSTDTQTSPEPGTR GVSLMGVQMPNLDLKEKVEPEVLSTDTQTS VLSTDTQTSPEPGTRMNILPKRTRRVKTQS K E K T R M 0 1 0 1 0 1 4 1 0 0 1 1 0 0 3 2 4 0 0 2 0 0 21 1 2299.1179 P29375;B4DVM9 P29375 190 210 KDM5A Lysine-specific demethylase 5A yes no 3 7.35E-07 40.625 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 638 751 691 1049 1696 1696 1169 0 EKYEITEQR RKPRHQEGEIFDTEKEKYEITEQRKIDQKA IFDTEKEKYEITEQRKIDQKAVDSQILPKI K E K Q R K 0 1 0 0 0 1 3 0 0 1 0 1 0 0 0 0 1 0 1 0 0 0 9 1 1194.5881 Q8TBK5;Q8N5Z7;A0A024RBK3;Q02878;B4DRX3;B2R4K7;Q9HBB3 Q8TBK5 238 246 RPL6 60S ribosomal protein L6 yes no 2 0.0083947 61.962 1 1.0235 1.3021 NaN 1 Median 1.0235 1.3021 NaN 1 0 Median NaN NaN NaN 0 0 Median 6785600 2788100 3997500 6785600 2788100 3997500 0 0 0 639 146 692 1050 1697 1697 1 EKYEITEQRK RKPRHQEGEIFDTEKEKYEITEQRKIDQKA FDTEKEKYEITEQRKIDQKAVDSQILPKIK K E K R K I 0 1 0 0 0 1 3 0 0 1 0 2 0 0 0 0 1 0 1 0 0 0 10 2 1322.683 Q8TBK5;Q8N5Z7;A0A024RBK3;Q02878;B4DRX3;B2R4K7;Q9HBB3 Q8TBK5 238 247 RPL6 60S ribosomal protein L6 yes no 3 0.0018955 59.542 1 0.73387 0.87548 NaN 1 Median 0.73387 0.87548 NaN 1 0 Median NaN NaN NaN 0 0 Median 42721000 24181000 18540000 42721000 24181000 18540000 0 0 0 640 146 693 1051 1698 1698 1 ELAAQLNEEAK RNEMTAEEKRRAHQKELAAQLNEEAKRRLT AHQKELAAQLNEEAKRRLTEQKGEQQIQKA K E L A K R 3 0 1 0 0 1 3 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 11 0 1214.6143 Q9Y5B9 Q9Y5B9 480 490 SUPT16H FACT complex subunit SPT16 yes yes 2 0.00080949 73.067 1 0.85192 1.0971 NaN 1 Median NaN NaN NaN 0 0 Median 0.85192 1.0971 NaN 1 0 Median 11407000 6314000 5092600 0 0 0 11407000 6314000 5092600 641 967 694 1052 1699;1700;1701 1701 3 ELAAQLNEEAKR RNEMTAEEKRRAHQKELAAQLNEEAKRRLT HQKELAAQLNEEAKRRLTEQKGEQQIQKAR K E L K R R 3 1 1 0 0 1 3 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 12 1 1370.7154 Q9Y5B9 Q9Y5B9 480 491 SUPT16H FACT complex subunit SPT16 yes yes 3 0.018012 28.859 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2945900 2945900 0 0 0 0 2945900 2945900 0 642 967 695 1053 1702 1702 1 ELAEDGYSGVEVR ADGIFKAELNEFLTRELAEDGYSGVEVRVT TRELAEDGYSGVEVRVTPTRTEIIILATRT R E L V R V 1 1 0 1 0 0 3 2 0 0 1 0 0 0 0 1 0 0 1 2 0 0 13 0 1422.6627 E9PPU1;H0YEU2;E9PL09;Q53G83;P23396;E9PQ96;E9PJH4;F2Z2S8;H0YF32;E9PK82;H0YCJ7 E9PPU1 28 40 RPS3 40S ribosomal protein S3 yes no 2 0.00013745 90.05 1 1 1.2708 1.6537 51.289 2 Median 0.90922 1.1507 NaN 1 0 Median 1.7762 2.3767 NaN 1 0 Median 14916000 6904100 8011800 4971600 2756900 2214700 9944300 4147200 5797100 643 625 696 1054;1055 1703;1704;1705;1706 1703 4 ELAGGDFTSPDASASSCGK EANLVGREAAKQQRKELAGGDFTSPDASAS GDFTSPDASASSCGKEVPEDSNNFDGSHVY K E L G K E 3 0 0 2 1 0 1 3 0 0 1 1 0 1 1 4 1 0 0 0 0 0 19 0 1855.7894 B7ZLX4;D6W5R0;A4D1I0;Q9ULJ8 B7ZLX4 363 381 PPP1R9A;hCG_1741805 Neurabin-1 yes no 2 0.00031124 41.644 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 644 310 697 1056 1707 1707 461;1836 0 ELDEEGSDPPLPGR RARELTVQKAEALMRELDEEGSDPPLPGRA RELDEEGSDPPLPGRAQRIRQVLQLLS___ R E L G R A 0 1 0 2 0 0 3 2 0 0 2 0 0 0 3 1 0 0 0 0 0 0 14 0 1509.6947 A0A024R836;C9JQV0;Q9BRJ6;H7C0T1;H7C2R9 A0A024R836 132 145 MGC11257;C7orf50 Uncharacterized protein C7orf50 yes no 2 6.4554E-05 75.669 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 645 100 698 1057 1708;1709 1709 139 0 ELDHNISK AKHKEQNNDSQLKIKELDHNISKHKREAED DSQLKIKELDHNISKHKREAEDGAAKVSKM K E L S K H 0 0 1 1 0 0 1 0 1 1 1 1 0 0 0 1 0 0 0 0 0 0 8 0 954.47706 B7ZLZ7;A0A024R158;O95347;A8K984;B3KMB1;B3KM27 B7ZLZ7 912 919 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 yes no 2 0.021479 54.157 1 0.60945 0.76517 NaN 1 Median NaN NaN NaN 0 0 Median 0.60945 0.76517 NaN 1 0 Median 8804200 4921900 3882300 0 0 0 8804200 4921900 3882300 646 27 699 1058 1710 1710 1 ELEANVLATAPDK QRLIEQEEYLNVQVKELEANVLATAPDKKK VKELEANVLATAPDKKKQKLLEENVSAFKT K E L D K K 3 0 1 1 0 0 2 0 0 0 2 1 0 0 1 0 1 0 0 1 0 0 13 0 1369.7089 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 841 853 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 2 0.0025509 45.764 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 945750 0 945750 0 0 0 945750 0 945750 647 941 700 1059 1711 1711 1 ELEDATETADAMNR EEAQRANASRRKLQRELEDATETADAMNRE RELEDATETADAMNREVSSLKNKLRRGDLP R E L N R E 3 1 1 2 0 0 3 0 0 0 1 0 1 0 0 0 2 0 0 0 0 0 14 0 1564.6675 A0A024R1N1;A0A0U4BW16;P35579;Q6ZNL4 A0A024R1N1 1899 1912 MYH9;FLJ00279 Myosin-9 yes no 2 0.0011784 52.693 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3527300 0 3527300 0 0 0 3527300 0 3527300 648 32 701 1060 1712 1712 2 1 ELEELRDK ALLNEKQAASPLEPKELEELRDKNESLTMR ASPLEPKELEELRDKNESLTMRLHETLKQC K E L D K N 0 1 0 1 0 0 3 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 8 1 1030.5295 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;A0A024R5G4;F5H4J1;A8K394;Q3SYK8;F5H6Y5 A0A087WY61 277 284 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 yes no 2 0.0045202 88.358 1 0.33509 0.4949 NaN 1 Median NaN NaN NaN 0 0 Median 0.33509 0.4949 NaN 1 0 Median 21738000 15135000 6603200 0 0 0 21738000 15135000 6603200 649 71 702 1061 1713 1713 1 ELEELSLEAQGIK KEKKKQDFDEDDILKELEELSLEAQGIKAD LKELEELSLEAQGIKADRETVAVKPTENNE K E L I K A 1 0 0 0 0 1 4 1 0 1 3 1 0 0 0 1 0 0 0 0 0 0 13 0 1457.7613 A0JLR8;Q05CQ1;Q8N5A0;A0A087WUT6;O60841 A0JLR8 61 73 EIF5B Eukaryotic translation initiation factor 5B yes no 2 1.8082E-05 72.705 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 650 182 703 1062 1714 1714 250 0 ELEEVSPETPVVPATTQR RGPLPTEEQRVYRRKELEEVSPETPVVPAT EVSPETPVVPATTQRTLARPGPEPAPATDE K E L Q R T 1 1 0 0 0 1 4 0 0 0 1 0 0 0 3 1 3 0 0 3 0 0 18 0 1981.0004 Q15149 Q15149 144 161 PLEC Plectin yes yes 2 1.1493E-17 100.43 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 651 822 704 1063 1715;1716 1716 1355 0 ELEFYLR PGQCGRADGYVLEGKELEFYLRKIKARKGK DGYVLEGKELEFYLRKIKARKGK_______ K E L L R K 0 1 0 0 0 0 2 0 0 0 2 0 0 1 0 0 0 0 1 0 0 0 7 0 968.49673 Q5JR95;Q5JR94;P62241;Q9BS10 Q5JR95 174 180 RPS8 40S ribosomal protein S8 yes no 2 0.026492 83.801 1 0.27161 0.34891 NaN 1 Median NaN NaN NaN 0 0 Median 0.27161 0.34891 NaN 1 0 Median 15371000 11192000 4179300 0 0 0 15371000 11192000 4179300 652 785 705 1064 1717 1717 1 ELEFYLRK PGQCGRADGYVLEGKELEFYLRKIKARKGK GYVLEGKELEFYLRKIKARKGK________ K E L R K I 0 1 0 0 0 0 2 0 0 0 2 1 0 1 0 0 0 0 1 0 0 0 8 1 1096.5917 Q5JR95;Q5JR94;P62241;Q9BS10 Q5JR95 174 181 RPS8 40S ribosomal protein S8 yes no 2 7.924E-05 97.071 1 1 0.53297 0.7437 82.287 2 Median 1.0535 1.3307 NaN 1 0 Median 0.26964 0.41562 NaN 1 0 Median 44170000 32975000 11195000 3988000 1981600 2006400 40182000 30994000 9188200 653 785 706 1065;1066 1718;1719;1720;1721 1718 4 ELEQDTPDAPPRPTSYYR VSASTTPKLPEVVYRELEQDTPDAPPRPTS QDTPDAPPRPTSYYRYIEKSAEELDEEVEY R E L Y R Y 1 2 0 2 0 1 2 0 0 0 1 0 0 0 4 1 2 0 2 0 0 0 18 1 2133.9967 P55201 P55201 183 200 BRPF1 Peregrin yes yes 3 9.9894E-14 98.269 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 654 779 707 1067;1068 1722;1723 1722 1989 0 ELEVLLMCNK MLPSGFRKFLVHNVKELEVLLMCNKSYCAE VHNVKELEVLLMCNKSYCAEIAHNVSSKNR K E L N K S 0 0 1 0 1 0 2 0 0 0 3 1 1 0 0 0 0 0 0 1 0 0 10 0 1247.6254 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 84 93 RPL32 60S ribosomal protein L32 yes no 2 0.021059 48.036 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1433600 1433600 0 0 0 0 1433600 1433600 0 655 46 708 1069 1724 1724 7 1 ELFQTPDHTEESTTDDK PKEEAQSLEDLAGFKELFQTPDHTEESTTD FQTPDHTEESTTDDKTTKIACKSPPPESMD K E L D K T 0 0 0 3 0 1 3 0 1 0 1 1 0 1 1 1 4 0 0 0 0 0 17 0 1991.8596 P46013 P46013 2081 2097 MKI67 Antigen KI-67 yes yes 2;3 1.3538E-08 74.147 1 4 0.84762 1.062 6.3866 2 Median NaN NaN NaN 0 0 Median 0.84762 1.062 6.3866 2 0 Median 175270000 90443000 84825000 0 0 0 175270000 90443000 84825000 656 762 709;710 1070;1071;1072;1073;1074 1725;1726;1727;1728;1729;1730;1731;1732;1733 1727 1974 4 ELFQTPGHTEEAVAAGK PKEEAQALEDLTGFKELFQTPGHTEEAVAA FQTPGHTEEAVAAGKTTKMPCESSPPESAD K E L G K T 3 0 0 0 0 1 3 2 1 0 1 1 0 1 1 0 2 0 0 1 0 0 17 0 1783.8741 P46013 P46013 1351 1367 MKI67 Antigen KI-67 yes yes 3 2.2173E-11 97.579 1 1.0022 1.2636 NaN 1 Median NaN NaN NaN 0 0 Median 1.0022 1.2636 NaN 1 0 Median 93735000 45989000 47746000 0 0 0 93735000 45989000 47746000 657 762 711 1075 1734;1735 1735 2 ELFQTPGHTEELVAAGK PKEKAQALEDLAGFKELFQTPGHTEELVAA FQTPGHTEELVAAGKTTKIPCDSPQSDPVD K E L G K T 2 0 0 0 0 1 3 2 1 0 2 1 0 1 1 0 2 0 0 1 0 0 17 0 1825.921 P46013 P46013 1229 1245 MKI67 Antigen KI-67 yes yes 3 3.863E-07 65.943 1 1.0217 1.2901 NaN 1 Median NaN NaN NaN 0 0 Median 1.0217 1.2901 NaN 1 0 Median 19457000 10389000 9067300 0 0 0 19457000 10389000 9067300 658 762 712 1076 1736;1737 1736 2 ELFQTPGHTEESMTDDK PKEKAKALEDLAGFKELFQTPGHTEESMTD FQTPGHTEESMTDDKITEVSCKSPQPDPVK K E L D K I 0 0 0 2 0 1 3 1 1 0 1 1 1 1 1 1 3 0 0 0 0 0 17 0 1963.8469 P46013 P46013 1959 1975 MKI67 Antigen KI-67 yes no 3 3.9571E-06 59.502 1 0.95797 1.2077 NaN 1 Median NaN NaN NaN 0 0 Median 0.95797 1.2077 NaN 1 0 Median 99524000 53007000 46517000 0 0 0 99524000 53007000 46517000 659 762 713 1077 1738 1738 174 1 ELFQTPGTDKPTTDEK PKEKAQALEDLAGFKELFQTPGTDKPTTDE LFQTPGTDKPTTDEKTTKIACKSPQPDPVD K E L E K T 0 0 0 2 0 1 2 1 0 0 1 2 0 1 2 0 4 0 0 0 0 0 16 1 1805.8683 P46013 P46013 2321 2336 MKI67 Antigen KI-67 yes yes 3 4.4391E-07 72.446 1 0.94845 1.1466 NaN 1 Median NaN NaN NaN 0 0 Median 0.94845 1.1466 NaN 1 0 Median 42212000 19861000 22351000 0 0 0 42212000 19861000 22351000 660 762 714 1078 1739;1740 1739 2 ELFQTPVCTDKPTTHEK TKEKAQPLEDLAGLKELFQTPVCTDKPTTH FQTPVCTDKPTTHEKTTKIACRSQPDPVDT K E L E K T 0 0 0 1 1 1 2 0 1 0 1 2 0 1 2 0 4 0 0 1 0 0 17 1 2029.9779 P46013 P46013 1472 1488 MKI67 Antigen KI-67 yes yes 3 1.058E-06 64.52 1 1 0.78976 0.96708 5.6149 2 Median 0.80991 1.0062 NaN 1 0 Median 0.77012 0.92943 NaN 1 0 Median 59627000 32168000 27458000 12687000 6589800 6097100 46940000 25579000 21361000 661 762 715 1079;1080 1741;1742 1742 2 ELFQTR PKEKAQALEDLAGFKELFQTRGHTEESMTN ALEDLAGFKELFQTRGHTEESMTNDKTAKV K E L T R G 0 1 0 0 0 1 1 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 6 0 792.413 P46013 P46013 1593 1598 MKI67 Antigen KI-67 yes yes 2 0.014622 88.734 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 8190900 0 8190900 0 0 0 8190900 0 8190900 662 762 716 1081 1743 1743 1 ELGFSSHR ATVKARPSVLWCYKKELGFSSHRKKRMRQL VLWCYKKELGFSSHRKKRMRQLQKKIKNGT K E L H R K 0 1 0 0 0 0 1 1 1 0 1 0 0 1 0 2 0 0 0 0 0 0 8 0 931.45118 Q9H0A0;E9PMU0;E9PJN6;Q05CW7 Q9H0A0 62 69 NAT10 N-acetyltransferase 10 no no 2 0.01916 56.014 1 0.6271 0.87888 NaN 1 Median NaN NaN NaN 0 0 Median 0.6271 0.87888 NaN 1 0 Median 86451000 52585000 33866000 0 0 0 86451000 52585000 33866000 663 924;801 717 1082 1744;1745 1744 2 ELGFSSHRK ATVKARPSVLWCYKKELGFSSHRKKRMRQL LWCYKKELGFSSHRKKRMRQLQKKIKNGTL K E L R K K 0 1 0 0 0 0 1 1 1 0 1 1 0 1 0 2 0 0 0 0 0 0 9 1 1059.5461 Q9H0A0;E9PMU0;E9PJN6;Q05CW7 Q9H0A0 62 70 NAT10 N-acetyltransferase 10 no no 2 0.0057362 56.729 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 664 924;801 718 1083 1746 1746 1 ELGITALHIK YAAMLAAQDVAQRCKELGITALHIKLRATG AQRCKELGITALHIKLRATGGNRTKTPGPG K E L I K L 1 0 0 0 0 0 1 1 1 2 2 1 0 0 0 0 1 0 0 0 0 0 10 0 1093.6495 P62263;H0YB22;E5RH77;A4D1M5 P62263 87 96 RPS14;LOC401404 40S ribosomal protein S14 yes no 2 0.00098155 73.985 1 0.26598 0.34135 NaN 1 Median NaN NaN NaN 0 0 Median 0.26598 0.34135 NaN 1 0 Median 17547000 14067000 3480200 0 0 0 17547000 14067000 3480200 665 786 719 1084 1747 1747 1 ELHESAIVK IDPLLFKYKVQPTKKELHESAIVKATQISR VQPTKKELHESAIVKATQISRRKHLFSRDK K E L V K A 1 0 0 0 0 0 2 0 1 1 1 1 0 0 0 1 0 0 0 1 0 0 9 0 1024.5553 D3DS96;Q9NRL2;Q05CW0;Q32ND1 D3DS96 200 208 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes no 2 0.0022113 68.214 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 666 591 720 1085 1748 1748 1 ELILFSNSDNER GQTTTYLTYNDFINKELILFSNSDNERSIP INKELILFSNSDNERSIPSMVDGLKPGQRK K E L E R S 0 1 2 1 0 0 2 0 0 1 2 0 0 1 0 2 0 0 0 0 0 0 12 0 1435.6943 P11388;Q02880;Q71UH4;Q59H80;B4DKD0;E9PCY5 P11388 702 713 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2-beta;DNA topoisomerase 2 no no 2 0.001695 83.883 1 1.0064 1.3975 NaN 1 Median NaN NaN NaN 0 0 Median 1.0064 1.3975 NaN 1 0 Median 65624000 33381000 32243000 0 0 0 65624000 33381000 32243000 667 734;796 721 1086 1749 1749 1 ELILGSETPSSPR ______________________________ IRELILGSETPSSPRAGQLLEDAEAAVAGP R E L P R A 0 1 0 0 0 0 2 1 0 1 2 0 0 0 2 3 1 0 0 0 0 0 13 0 1384.7198 R4GNJ5;A0A0C4DGT6;Q96AP0;B4DVI0 R4GNJ5 15 27 ACD Adrenocortical dysplasia protein homolog yes no 2 1.835E-16 113.76 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 668 246 722 1087;1088 1750;1751;1752 1751 341;342 0 ELISNASDALDK LIINTFYSNKEIFLRELISNASDALDKIRY FLRELISNASDALDKIRYESLTDPSKLDSG R E L D K I 2 0 1 2 0 0 1 0 0 1 2 1 0 0 0 2 0 0 0 0 0 0 12 0 1274.6354 A0A024RD80;P08238;B4DMA2;B4DGL0;Q6PK50;F8W026;B4DQX3;Q96GW1;Q59FC6;Q5CAQ5;V9HWP2;P14625 A0A024RD80 42 53 HSP90AB1;HSP90B1;TRA1;HEL-S-125m Heat shock protein HSP 90-beta;Endoplasmin yes no 2 0.0037618 61.958 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2301500 0 2301500 0 0 0 2301500 0 2301500 669 167 723 1089 1753 1753 1 ELKPQKSVVSDLEADDVK ASPPKTKTSPKLSNKELKPQKSVVSDLEAD PQKSVVSDLEADDVKGSVPLSSSPPATHFP K E L V K G 1 0 0 3 0 1 2 0 0 0 2 3 0 0 1 2 0 0 0 3 0 0 18 2 1999.0474 P11388 P11388 1368 1385 TOP2A DNA topoisomerase 2-alpha yes yes 3 7.2912E-11 77.576 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 670 734 724 1090 1754;1755 1755 1136;1137 0 ELLIFNK IKDELKKVCSTNDLKELLIFNKQQVPSGES VCSTNDLKELLIFNKQQVPSGESAILDRVA K E L N K Q 0 0 1 0 0 0 1 0 0 1 2 1 0 1 0 0 0 0 0 0 0 0 7 0 875.51165 A0A024R3T8;P09874;B2R5W3;B4E0E1 A0A024R3T8 263 269 PARP1 Poly [ADP-ribose] polymerase 1 yes no 2 0.018638 50.539 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2723500 2723500 0 0 0 0 2723500 2723500 0 671 56 725 1091 1756 1756 1 ELLTLDEKDPR WRVKFTLAKIRKAARELLTLDEKDPRRLFE KAARELLTLDEKDPRRLFEGNALLRRLVRI R E L P R R 0 1 0 2 0 0 2 0 0 0 3 1 0 0 1 0 1 0 0 0 0 0 11 1 1327.6983 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;F2Z3C0;A8MXK4 A0A024R4M0 59 69 RPS9 40S ribosomal protein S9 yes no 2 0.00078666 70.056 1 0.51337 0.67377 NaN 1 Median NaN NaN NaN 0 0 Median 0.51337 0.67377 NaN 1 0 Median 7803100 4802300 3000800 0 0 0 7803100 4802300 3000800 672 62 726 1092 1757 1757 1 ELMRGEEGRPGK IQDYDLFKQSYWNHRELMRGEEGRPGKKLK NHRELMRGEEGRPGKKLKKVKLRKLERPPE R E L G K K 0 2 0 0 0 0 3 3 0 0 1 1 1 0 1 0 0 0 0 0 0 0 12 2 1357.6772 B3KY63;F5GWX5;A0A0C4DGG9;Q14839 B3KY63 650 661 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 3 0.0019614 41.383 1 1.0291 1.3802 NaN 1 Median NaN NaN NaN 0 0 Median 1.0291 1.3802 NaN 1 0 Median 18673000 7754900 10918000 0 0 0 18673000 7754900 10918000 673 244 727 1093 1758 1758 51 1 ELNEDKLEK NATYCRLAQFIGNRRELNEDKLEKLEELTM FIGNRRELNEDKLEKLEELTMDGAKAKAIL R E L E K L 0 0 1 1 0 0 3 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 9 1 1116.5663 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 222 230 NOP56 Nucleolar protein 56 yes no 2 2.0015E-08 104.89 1 0.59383 0.71673 NaN 1 Median NaN NaN NaN 0 0 Median 0.59383 0.71673 NaN 1 0 Median 46689000 29887000 16802000 0 0 0 46689000 29887000 16802000 674 379 728 1094 1759 1759 1 ELNNYIMR TMIVQAISLLDDLDKELNNYIMRCREWYGW LLDDLDKELNNYIMRCREWYGWHFPELGKI K E L M R C 0 1 2 0 0 0 1 0 0 1 1 0 1 0 0 0 0 0 1 0 0 0 8 0 1051.5121 Q9Y2X3;B3KN82;H7BZ72 Q9Y2X3 175 182 NOP58 Nucleolar protein 58 yes no 2 0.0058879 86.086 1 0.45707 0.61051 NaN 1 Median NaN NaN NaN 0 0 Median 0.45707 0.61051 NaN 1 0 Median 7274100 4704700 2569500 0 0 0 7274100 4704700 2569500 675 964 729 1095 1760 1760 229 1 ELPAAEPVLSPLEGTK TNMSRTLVNKEEPPKELPAAEPVLSPLEGT LPAAEPVLSPLEGTKMTVNNLHPRVTEEDI K E L T K M 2 0 0 0 0 0 3 1 0 0 3 1 0 0 3 1 1 0 0 1 0 0 16 0 1649.8876 B4DMM2;Q96DI9;F6VRR5;B4E0L0;Q9BY77 B4DMM2 110 125 POLDIP3 Polymerase delta-interacting protein 3 yes no 2 4.3276E-07 84.41 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 676 482 730 1096 1761;1762 1762 699 0 ELPRPVLEGQQSER EELEELGKEECFQNKELPRPVLEGQQSERT KELPRPVLEGQQSERTPNNRPDAPKEKKKK K E L E R T 0 2 0 0 0 2 3 1 0 0 2 0 0 0 2 1 0 0 0 1 0 0 14 1 1636.8533 Q9BVJ6;B4E343;Q08E77;A0A024RDV0;Q5TAP6 Q9BVJ6 527 540 UTP14A;UTP14C;hCG_1811699 U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C yes no 3 0.020774 34.432 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2983000 2983000 0 0 0 0 2983000 2983000 0 677 919 731 1097 1763 1763 1 ELQCLTPR ADVIQATGDAICIFRELQCLTPRGRYDIRI DAICIFRELQCLTPRGRYDIRIYPTFLHLH R E L P R G 0 1 0 0 1 1 1 0 0 0 2 0 0 0 1 0 1 0 0 0 0 0 8 0 1015.5121 A0A024R4Z6;Q08945;E9PMD4 A0A024R4Z6 204 211 SSRP1 FACT complex subunit SSRP1 yes no 2 0.021272 54.611 1 1.7564 2.3141 NaN 1 Median NaN NaN NaN 0 0 Median 1.7564 2.3141 NaN 1 0 Median 5831800 2227400 3604400 0 0 0 5831800 2227400 3604400 678 65 732 1098 1764 1764 1 ELQGDGPPSSPTNDPTVK GEDPAQPRKYKKKKKELQGDGPPSSPTNDP GDGPPSSPTNDPTVKYETQPRFITATGGTL K E L V K Y 0 0 1 2 0 1 1 2 0 0 1 1 0 0 4 2 2 0 0 1 0 0 18 0 1837.8694 Q12873 Q12873 704 721 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes yes 2 1.1212E-17 100.58 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 679 806 733 1099;1100 1765;1766;1767;1768 1765 1323 0 ELSESVQQQSTPVPLISPK LNLNLDRSKAEMDLKELSESVQQQSTPVPL SVQQQSTPVPLISPKRQIRSRFQLNLDKTI K E L P K R 0 0 0 0 0 3 2 0 0 1 2 1 0 0 3 4 1 0 0 2 0 0 19 0 2066.0895 A0A087WYS3;H7C4X9;A0A087WVZ6;Q9ULU4;A0A087WV57;A6H8Y8;Q5JV90 A0A087WYS3 531 549 ZMYND8;DKFZp564P1772 Protein kinase C-binding protein 1 yes no 2 3.3525E-12 89.859 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 680 190 734;735 1101;1102;1103 1769;1770;1771;1772 1770 271;1809 0 ELSESVQQQSTPVPLISPKR LNLNLDRSKAEMDLKELSESVQQQSTPVPL VQQQSTPVPLISPKRQIRSRFQLNLDKTIE K E L K R Q 0 1 0 0 0 3 2 0 0 1 2 1 0 0 3 4 1 0 0 2 0 0 20 1 2222.1907 A0A087WYS3;H7C4X9;A0A087WVZ6;Q9ULU4;A0A087WV57;A6H8Y8;Q5JV90 A0A087WYS3 531 550 ZMYND8;DKFZp564P1772 Protein kinase C-binding protein 1 yes no 3 9.1246E-11 58.904 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 681 190 736 1104 1773 1773 271;1809 0 ELSPAALEK LHEKIQEARGQGSAKELSPAALEKRRRRKQ GQGSAKELSPAALEKRRRRKQERDRKKRKR K E L E K R 2 0 0 0 0 0 2 0 0 0 2 1 0 0 1 1 0 0 0 0 0 0 9 0 956.51786 B3KNS8;O75683 B3KNS8 136 144 SURF6 Surfeit locus protein 6 yes no 2 1.1776E-78 153.33 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 682 435 737 1105;1106 1774;1775;1776;1777;1778;1779;1780;1781 1778 639 0 ELSPPPGLPSK IGMNTETSGTSAREKELSPPPGLPSKIGSM AREKELSPPPGLPSKIGSM___________ K E L S K I 0 0 0 0 0 0 1 1 0 0 2 1 0 0 4 2 0 0 0 0 0 0 11 0 1120.6128 H0YIM6;Q68D13;H0YI78;H0YHT2;A0A024R0V9;A0A1B0GV47;Q7Z4S6 H0YIM6 461 471 KIF21A;DKFZp779C159 Kinesin-like protein;Kinesin-like protein KIF21A yes no 2 0.003338 56.202 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 683 22 738 1107 1782;1783 1783 21 0 ELSTSPCNPTVR ADEKEEDDRILKTSRELSTSPCNPTVRQKE TSRELSTSPCNPTVRQKESELQMTSAASPH R E L V R Q 0 1 1 0 1 0 1 0 0 0 1 0 0 0 2 2 2 0 0 1 0 0 12 0 1359.6453 B4DGC7 B4DGC7 420 431 yes yes 2 3.6265E-05 75.479 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 684 466 739 1108 1784 1784 674 0 ELSVEEQIK QKSQDVELWEGEVVKELSVEEQIKRNRYYD EGEVVKELSVEEQIKRNRYYDEDEDEE___ K E L I K R 0 0 0 0 0 1 3 0 0 1 1 1 0 0 0 1 0 0 0 1 0 0 9 0 1073.5605 B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2;F8VQE1 B4DN52 658 666 LIMA1 LIM domain and actin-binding protein 1 yes no 2 1.2373E-05 78.655 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 685 485 740 1109 1785 1785 701 0 ELTTEIDNNIEQISSYK QNRKDAEAWFNEKSKELTTEIDNNIEQISS TTEIDNNIEQISSYKSEITELRRNVQALEI K E L Y K S 0 0 2 1 0 1 3 0 0 3 1 1 0 0 0 2 2 0 1 0 0 0 17 0 1995.9637 CON__P13645;P13645 CON__P13645 346 362 KRT10 Keratin, type I cytoskeletal 10 yes no 2 6.3772E-07 83.243 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 62956000 62956000 0 0 0 0 62956000 62956000 0 + 686 579 741 1110 1786;1787 1787 2 ELTVDNSFEFEK RKVRWTKAFRKAAGKELTVDNSFEFEKRRN AGKELTVDNSFEFEKRRNEPIKYQR_____ K E L E K R 0 0 1 1 0 0 3 0 0 0 1 1 0 2 0 1 1 0 0 1 0 0 12 0 1456.6722 H3BMQ2;B3KP47;A0A024R5U8;Q9UHA3 H3BMQ2 45 56 RSL24D1;C15orf15 Probable ribosome biogenesis protein RLP24 yes no 2 4.2566E-52 139.78 2 2 0.99991 1.2432 26.177 2 Median 1.2708 1.496 NaN 1 0 Median 0.78674 1.0331 NaN 1 0 Median 9315700 5153400 4162300 2863000 1475300 1387700 6452700 3678100 2774600 687 73 742;743 1111;1112;1113;1114 1788;1789;1790;1791;1792;1793 1789 102 2 ELVSSSSSGSDSDSEVDK ______________________________ SSSSSGSDSDSEVDKKLKRKKQVAPEKPVK K E L D K K 0 0 0 3 0 0 2 1 0 0 1 1 0 0 0 8 0 0 0 2 0 0 18 0 1813.7701 Q6IBA2;Q59G24;P53999;D6RC37;D6R970;B7Z1Z0 Q6IBA2 6 23 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes no 2 1.1423E-13 95.414 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 688 777 744 1115 1794;1795 1794 1259 0 ELVSSSSSGSDSDSEVDKK ______________________________ SSSSGSDSDSEVDKKLKRKKQVAPEKPVKK K E L K K L 0 0 0 3 0 0 2 1 0 0 1 2 0 0 0 8 0 0 0 2 0 0 19 1 1941.8651 Q6IBA2;Q59G24;P53999;D6RC37;D6R970;B7Z1Z0 Q6IBA2 6 24 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes no 2;3 3.0725E-13 74.776 2 0.4174 0.52226 NaN 1 Median NaN NaN NaN 0 0 Median 0.4174 0.52226 NaN 1 0 Median 13858000 10096000 3762100 0 0 0 13858000 10096000 3762100 689 777 745;746 1116;1117 1796;1797 1797 1259 1 ELYIHR PQVSLIINYDLPNNRELYIHRIGRSGRYGR INYDLPNNRELYIHRIGRSGRYGRKGVAIN R E L H R I 0 1 0 0 0 0 1 0 1 1 1 0 0 0 0 0 0 0 1 0 0 0 6 0 829.44464 A0A024R8W0;P38919 A0A024R8W0 359 364 DDX48;EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes no 2 0.010337 56.51 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 17082000 0 17082000 0 0 0 17082000 0 17082000 690 108 747 1118 1798 1798 1 ELYVKLTPVSLSNSPIK NRGGIKSKTTAKVTKELYVKLTPVSLSNSP YVKLTPVSLSNSPIKGADCQEVPQDKDGYK K E L I K G 0 0 1 0 0 0 1 0 0 1 3 2 0 0 2 3 1 0 1 2 0 0 17 1 1887.0717 A4LAA3;P46100 A4LAA3 585 601 ATRX Transcriptional regulator ATRX yes no 2 4.604E-60 139.02 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 691 317 748;749 1119;1120;1121 1799;1800;1801;1802;1803 1800 469;470;471;1839 0 EMEAELEDERK EQSEEKKKQLVRQVREMEAELEDERKQRSM RQVREMEAELEDERKQRSMAVAARKKLEMD R E M R K Q 1 1 0 1 0 0 5 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 11 1 1377.6082 A0A024R1N1;A0A0U4BW16;P35579;Q6ZNL4 A0A024R1N1 1593 1603 MYH9;FLJ00279 Myosin-9 yes no 3 0.001246 54.7 1 3.7085 5.498 NaN 1 Median NaN NaN NaN 0 0 Median 3.7085 5.498 NaN 1 0 Median 22568000 4623900 17944000 0 0 0 22568000 4623900 17944000 692 32 750 1122 1804 1804 3 1 EMFEDTVEER ______________________________ ______________________________ K E M E R V 0 1 0 1 0 0 4 0 0 0 0 0 1 1 0 0 1 0 0 1 0 0 10 0 1283.534 E9PC52;Q6FHQ0;Q16576;A8K6A2 E9PC52 5 14 RBBP7 Histone-binding protein RBBP7 yes no 2 0.0045995 42.743 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 693 612 751 1123 1805 1805 128 1 ENALTVVQKDSSELPTTK TPKKPPPEINPVDGRENALTVVQKDSSELP LTVVQKDSSELPTTKSNSINSSSVDSFTPG R E N T K S 1 0 1 1 0 1 2 0 0 0 2 2 0 0 1 2 3 0 0 2 0 0 18 1 1959.0161 A0A1B0GUH9 A0A1B0GUH9 209 226 yes yes 3 1.0977E-06 54.658 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 694 286 752 1124 1806 1806 430;431 0 ENDTVTISPK VGILAPEANPKAEEKENDTVTISPKQEGFP KAEEKENDTVTISPKQEGFPPKGYFPSGKK K E N P K Q 0 0 1 1 0 0 1 0 0 1 0 1 0 0 1 1 2 0 0 1 0 0 10 0 1102.5506 W5ZR30;Q9UGU0 W5ZR30 1515 1524 TCF20 Transcription factor 20 yes no 2 5.0409E-21 120.84 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 695 949 753 1125 1807;1808 1807 1687 0 ENEFSFEDNAIR VVTYVGDKDSRAIIRENEFSFEDNAIRGGK IIRENEFSFEDNAIRGGKKASRMKKEASVK R E N I R G 1 1 2 1 0 0 3 0 0 1 0 0 0 2 0 1 0 0 0 0 0 0 12 0 1469.6423 B3KY63;F5GWX5;A0A0C4DGG9;Q14839;Q8TDI0;Q659F1;K7EMY3;Q659D0;Q6ZSZ4;F2Z2R5 B3KY63 792 803 CHD4;CHD5;DKFZp434K213;DKFZp434P202 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 5 yes no 2 0.0012533 64.82 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 4532900 0 4532900 0 0 0 4532900 0 4532900 696 244 754 1126;1127 1809;1810;1811 1811 3 ENEPQQMVSPSNSLR APSVYSFFSEEGTGKENEPQQMVSPSNSLR ENEPQQMVSPSNSLRAGQSQKATMHLKQEV K E N L R A 0 1 2 0 0 2 2 0 0 0 1 0 1 0 2 3 0 0 0 1 0 0 15 0 1714.7944 A0A0C4DGM5;A0A024R9R5;Q9H2Y7;H3BNX5;B4DGC7 A0A0C4DGM5 70 84 ZNF106;ZFP106 Zinc finger protein 106 no no 2 1.3654E-06 85.473 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 697 121;466 755 1128 1812 1812 24 172 0 ENFALECSPAFQVSDDEHEK LVPLSVSSGKNVIIKENFALECSPAFQVSD ECSPAFQVSDDEHEKMDKMKFKVNRRTQKS K E N E K M 2 0 1 2 1 1 4 0 1 0 1 1 0 2 1 2 0 0 0 1 0 0 20 0 2351.0012 B7Z7S9;Q562F6 B7Z7S9 1174 1193 SGOL2 Shugoshin-like 2 yes no 3 8.1084E-31 111.57 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 698 543 756 1129;1130 1813;1814 1813 785;786 0 ENGFSSPPQIK EKVRASGDAKIKKEKENGFSSPPQIKDEPE KKEKENGFSSPPQIKDEPEDDGYFVPPKED K E N I K D 0 0 1 0 0 1 1 1 0 1 0 1 0 1 2 2 0 0 0 0 0 0 11 0 1202.5932 P11387;B9EG90;Q6PK95;Q6NWZ5 P11387 107 117 TOP1 DNA topoisomerase 1 yes no 2 8.0645E-13 89.301 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 699 733 757 1131;1132 1815;1816 1816 1132 0 ENGFSSPPQIKDEPEDDGYFVPPK EKVRASGDAKIKKEKENGFSSPPQIKDEPE IKDEPEDDGYFVPPKEDIKPLKRPRDEDDA K E N P K E 0 0 1 3 0 1 3 2 0 1 0 2 0 2 5 2 0 0 1 1 0 0 24 1 2691.234 P11387;B9EG90;Q6PK95;Q6NWZ5 P11387 107 130 TOP1 DNA topoisomerase 1 yes no 3 3.413E-27 92.449 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 700 733 758 1133 1817;1818 1817 1132 0 ENIQTTNYNTALDFHSNSDVTK NSEEWFAAACKKELKENIQTTNYNTALDFH YNTALDFHSNSDVTKQVIQTHVNAGEAPDP K E N T K Q 1 0 4 2 0 1 1 0 1 1 1 1 0 1 0 2 4 0 1 1 0 0 22 0 2511.1514 E9PPJ1;Q8NG31;H0YCZ2 E9PPJ1 1509 1530 CASC5 Protein CASC5 yes no 3 0.0043331 21.569 1 0.62711 0.77556 NaN 1 Median 0.62711 0.77556 NaN 1 0 Median NaN NaN NaN 0 0 Median 5260900 2761800 2499100 5260900 2761800 2499100 0 0 0 701 627 759 1134 1819 1819 1 ENRDIEISTEEEK IIQKDIIKEASEASKENRDIEISTEEEKDT SKENRDIEISTEEEKDTGDLKDSSLLKTKR K E N E K D 0 1 1 1 0 0 5 0 0 2 0 1 0 0 0 1 1 0 0 0 0 0 13 1 1590.7373 Q4G0J3 Q4G0J3 330 342 LARP7 La-related protein 7 yes yes 2 0.00067936 49.5 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 702 832 760 1135 1820 1820 1373;2001 0 ENSSMRLELDALR RQRVELQQEVEKLARENSSMRLELDALRSK ARENSSMRLELDALRSKYEALQTFARTVAR R E N L R S 1 2 1 1 0 0 2 0 0 0 3 0 1 0 0 2 0 0 0 0 0 0 13 1 1532.7617 A0A024R804;A8WFP5;O60675 A0A024R804 96 108 MAFK Transcription factor MafK yes no 3 0.023992 57.159 1 1.1708 1.7299 NaN 1 Median NaN NaN NaN 0 0 Median 1.1708 1.7299 NaN 1 0 Median 9467400 4173900 5293500 0 0 0 9467400 4173900 5293500 703 98 761 1136 1821 1821 19 1 ENVYDELR DRFLICMLHKLGFDKENVYDELRQCIRNSP HKLGFDKENVYDELRQCIRNSPQFRFDWFL K E N L R Q 0 1 1 1 0 0 2 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 8 0 1036.4825 B7ZAX9;B4DZC0;O60264 B7ZAX9 910 917 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes no 2 0.0073404 59.245 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2123600 0 2123600 0 0 0 2123600 0 2123600 704 510 762 1137 1822 1822 1 EPFTIAQGK KKVERLTMQVSSLQREPFTIAQGKGQKLCE VSSLQREPFTIAQGKGQKLCEIERIHFFLS R E P G K G 1 0 0 0 0 1 1 1 0 1 0 1 0 1 1 0 1 0 0 0 0 0 9 0 989.5182 P35659;B4DNW3;D6R9L5;D6RDA2 P35659 76 84 DEK Protein DEK yes no 2 0.01236 50.607 1 0.68019 0.86104 NaN 1 Median NaN NaN NaN 0 0 Median 0.68019 0.86104 NaN 1 0 Median 8055200 4479800 3575400 0 0 0 8055200 4479800 3575400 705 754 763 1138 1823 1823 1 EPHSPADQPEQQAESTLTSAETR SFLRLSFASETPLEKEPHSPADQPEQQAES PEQQAESTLTSAETRGSKKKKKLRKKKSLR K E P T R G 3 1 0 1 0 3 4 0 1 0 1 0 0 0 3 3 3 0 0 0 0 0 23 0 2508.1365 A0A0C4DGM5;A0A024R9R5;Q9H2Y7;Q86T35;H3BS99 A0A0C4DGM5 510 532 ZNF106;ZFP106;DKFZp451A177 Zinc finger protein 106 yes no 3 3.9874E-16 70.315 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 706 121 764 1139;1140 1824;1825;1826 1824 173 0 EPLEFHAK ______________________________ ______________________________ K E P A K R 1 0 0 0 0 0 2 0 1 0 1 1 0 1 1 0 0 0 0 0 0 0 8 0 969.49198 B2R5U7;Q03701 B2R5U7 6 13 CEBPZ CCAAT/enhancer-binding protein zeta yes no 2 0.0094193 63.48 1 0.47915 0.63231 NaN 1 Median NaN NaN NaN 0 0 Median 0.47915 0.63231 NaN 1 0 Median 14148000 8760000 5388500 0 0 0 14148000 8760000 5388500 707 402 765 1141 1827 1827 1 EPSEVPTPK QPPVSPGTALVGSQKEPSEVPTPKRPRGRP LVGSQKEPSEVPTPKRPRGRPKGSKNKGAA K E P P K R 0 0 0 0 0 0 2 0 0 0 0 1 0 0 3 1 1 0 0 1 0 0 9 0 982.49713 P17096;B4DWA0;A0A024RCT9;Q5T6U8;Q6IPL9 P17096 47 55 HMGA1 High mobility group protein HMG-I/HMG-Y no no 2 0.0085929 57.931 1 0.57609 0.71781 NaN 1 Median NaN NaN NaN 0 0 Median 0.57609 0.71781 NaN 1 0 Median 33150000 20764000 12386000 0 0 0 33150000 20764000 12386000 708 740;846 766 1142 1828;1829;1830 1829 3 EQDQRPLHPVANPHAEISTK WNIFSEASNSEPVNKEQDQRPLHPVANPHA PLHPVANPHAEISTKVPASKVKDAVEQQGE K E Q T K V 2 1 1 1 0 2 2 0 2 1 1 1 0 0 3 1 1 0 0 1 0 0 20 1 2266.1454 Q9NX58 Q9NX58 149 168 LYAR Cell growth-regulating nucleolar protein yes yes 4 2.0481E-05 35.421 1 0.5788 0.82272 NaN 1 Median NaN NaN NaN 0 0 Median 0.5788 0.82272 NaN 1 0 Median 16208000 10627000 5581100 0 0 0 16208000 10627000 5581100 709 944 767 1143 1831 1831 1 EQFFSDEERK TTEELDVSIDILTSREQFFSDEERKYMAIN ILTSREQFFSDEERKYMAINQKKAYILVTP R E Q R K Y 0 1 0 1 0 1 3 0 0 0 0 1 0 2 0 1 0 0 0 0 0 0 10 1 1313.5888 Q6P0N0 Q6P0N0 630 639 MIS18BP1 Mis18-binding protein 1 yes yes 2 0.0051262 43.68 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 710 858 768 1144 1832 1832 1421 0 EQISDIDDAVR RKGISLNPEQWSQLKEQISDIDDAVRKL__ SQLKEQISDIDDAVRKL_____________ K E Q V R K 1 1 0 3 0 1 1 0 0 2 0 0 0 0 0 1 0 0 0 1 0 0 11 0 1259.5994 Q6IBA2;Q59G24;P53999;Q6E433 Q6IBA2 115 125 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes no 2 0.00041028 73.848 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 711 777 769 1145;1146 1833;1834;1835 1835 1260 0 EQIVPKPEEEVAQK YMSSPCHIEMILTEKEQIVPKPEEEVAQKK KEQIVPKPEEEVAQKKK_____________ K E Q Q K K 1 0 0 0 0 2 4 0 0 1 0 2 0 0 2 0 0 0 0 2 0 0 14 1 1622.8516 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8 A0A087WXM6 154 167 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 yes no 3 0.001377 54.402 1 1 0.48185 0.5798 70.975 2 Median 0.7904 0.95772 NaN 1 0 Median 0.29376 0.35101 NaN 1 0 Median 92487000 70516000 21970000 5952000 3096500 2855500 86535000 67420000 19115000 712 43 770 1147;1148 1836;1837;1838 1837 3 EQIVPKPEEEVAQKK YMSSPCHIEMILTEKEQIVPKPEEEVAQKK EQIVPKPEEEVAQKKK______________ K E Q K K K 1 0 0 0 0 2 4 0 0 1 0 3 0 0 2 0 0 0 0 2 0 0 15 2 1750.9465 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8 A0A087WXM6 154 168 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 yes no 3 7.3299E-05 60.968 1 0.29455 0.42535 NaN 1 Median NaN NaN NaN 0 0 Median 0.29455 0.42535 NaN 1 0 Median 81461000 62348000 19112000 0 0 0 81461000 62348000 19112000 713 43 771 1149 1839;1840;1841 1841 3 EQLADARR EKSMMNLQTKIDAKKEQLADARRDLKSAKA TKIDAKKEQLADARRDLKSAKADAKVMKDA K E Q R R D 2 2 0 1 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 8 1 957.49919 P11387;B9EG90;Q9BVT2 P11387 656 663 TOP1 DNA topoisomerase 1 yes no 2 0.0067259 83.753 1 0.76017 1.1795 NaN 1 Median NaN NaN NaN 0 0 Median 0.76017 1.1795 NaN 1 0 Median 11812000 6814600 4997800 0 0 0 11812000 6814600 4997800 714 733 772 1150 1842 1842 1 EQMIDLQNLLTTQSPSVK TPNNRPDAPKEKKKKEQMIDLQNLLTTQSP IDLQNLLTTQSPSVKSLAVPTIEELEDEEE K E Q V K S 0 0 1 1 0 3 1 0 0 1 3 1 1 0 1 2 2 0 0 1 0 0 18 0 2044.0511 Q9BVJ6;B4E343 Q9BVJ6 556 573 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes no 2 1.437E-17 102.39 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 715 919 773 1151 1843;1844 1844 214 1595 0 EQPQLTSTCHIAISNSENLLGK EDLSGIAEMFKTPVKEQPQLTSTCHIAISN TCHIAISNSENLLGKQFQGTDSGEEPLLPT K E Q G K Q 1 0 2 0 1 2 2 1 1 2 3 1 0 0 1 3 2 0 0 0 0 0 22 0 2439.2064 P46013;Q70L73 P46013 765 786 MKI67 Antigen KI-67 no no 3 0.028548 12.677 1 0.77412 0.97926 NaN 1 Median NaN NaN NaN 0 0 Median 0.77412 0.97926 NaN 1 0 Median 8116000 4656700 3459300 0 0 0 8116000 4656700 3459300 716 762;865 774 1152 1845 1845 0 EQQLLSTLK SQMAEKQLEESVSEKEQQLLSTLKCQDEEL ESVSEKEQQLLSTLKCQDEELEKMREVCEQ K E Q L K C 0 0 0 0 0 2 1 0 0 0 3 1 0 0 0 1 1 0 0 0 0 0 9 0 1058.5972 Q59HG1;O95239;B3KNC0 Q59HG1 959 967 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A yes no 2 0.0023475 59.84 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 717 717 775 1153 1846 1846 1084 0 EREDECFSCGDAGQLVSCK KKQQGKRRTQGEITKEREDECFSCGDAGQL ECFSCGDAGQLVSCKKPGCPKVYHADCLNL K E R C K K 1 1 0 2 3 1 3 2 0 0 1 1 0 1 0 2 0 0 0 1 0 0 19 1 2245.9038 B2RWP5;Q96L73;Q658U6;Q9H6B5;A0A1D8GZ55;A0A1D8GZ56;Q9H6H8 B2RWP5 1847 1865 NSD1;DKFZp666C163 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific yes no 3 4.8903E-07 55.061 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 718 422 776 1154 1847 1847 622 0 EREDSGDAEAHAFK TDTSQSGEDGGCWQREREDSGDAEAHAFKS REREDSGDAEAHAFKSPSKENKKKDKDMLE R E R F K S 3 1 0 2 0 0 3 1 1 0 0 1 0 1 0 1 0 0 0 0 0 0 14 1 1560.6805 A0A024R6Q8;Q9NPI1 A0A024R6Q8 132 145 BRD7 Bromodomain-containing protein 7 yes no 3 0.0009463 41.86 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 719 85 777 1155 1848 1848 117 0 ERFAGVDIR NGLIKLLEPVLLLGKERFAGVDIRVRVKGG VLLLGKERFAGVDIRVRVKGGGHVAQIYAI K E R I R V 1 2 0 1 0 0 1 1 0 1 0 0 0 1 0 0 0 0 0 1 0 0 9 1 1061.5618 M0R210;P62249;A0A087WZ27;M0QX76;M0R1M5;M0R3H0;B4DP32;Q6IPX4 M0R210 44 52 RPS16;ZNF90 40S ribosomal protein S16 yes no 3 0.0038468 52.725 1 0.75939 1.055 NaN 1 Median NaN NaN NaN 0 0 Median 0.75939 1.055 NaN 1 0 Median 6502900 3209400 3293400 0 0 0 6502900 3209400 3293400 720 693 778 1156 1849;1850 1849 2 ERFDVGPK KGHEYRNQTFEGRQRERFDVGPKEKPLEEP TFEGRQRERFDVGPKEKPLEEPDAQGRASE R E R P K E 0 1 0 1 0 0 1 1 0 0 0 1 0 1 1 0 0 0 0 1 0 0 8 1 946.48723 Q9BTC0 Q9BTC0 2089 2096 DIDO1 Death-inducer obliterator 1 yes yes 2 0.028162 55.37 1 0.65556 0.86569 NaN 1 Median NaN NaN NaN 0 0 Median 0.65556 0.86569 NaN 1 0 Median 8497700 5213700 3284000 0 0 0 8497700 5213700 3284000 721 916 779 1157 1851 1851 1 ERLEQQVPVNQVFGQDEMIDVIGVTK QVNGGTVAEKLDWARERLEQQVPVNQVFGQ VFGQDEMIDVIGVTKGKGYKGVTSRWHTKK R E R T K G 0 1 1 2 0 4 3 2 0 2 1 1 1 1 1 0 1 0 0 5 0 0 26 1 2970.5121 B3KS36;P39023;H7C3M2;B5MCW2;H7C422;Q9NY85;G5E9G0;Q8TBW1;Q96QL0;Q49AJ9;Q9BT63 B3KS36 150 175 RPL3;rpl3 60S ribosomal protein L3 yes no 3 1.2595E-26 97.059 1 0.66865 1.0679 NaN 1 Median NaN NaN NaN 0 0 Median 0.66865 1.0679 NaN 1 0 Median 187110000 113550000 73566000 0 0 0 187110000 113550000 73566000 722 443 780 1158 1852 1852 88 1 ERLSDELLVK MAKLQLELNLCQKEKERLSDELLVKSDLET CQKEKERLSDELLVKSDLETVVHQLEQEKQ K E R V K S 0 1 0 1 0 0 2 0 0 0 3 1 0 0 0 1 0 0 0 1 0 0 10 1 1200.6714 Q66GS9 Q66GS9 380 389 CEP135 Centrosomal protein of 135 kDa yes yes 2 0.0078935 49.081 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 723 854 781 1159 1853 1853 1409 0 ERLYPLR NKHEENLKTKKQQRKERLYPLRKYAVKA__ KTKKQQRKERLYPLRKYAVKA_________ K E R L R K 0 2 0 0 0 0 1 0 0 0 2 0 0 0 1 0 0 0 1 0 0 0 7 1 945.5396 P42766 P42766 111 117 RPL35 60S ribosomal protein L35 yes yes 2 0.014742 89.296 1 0.27844 0.505 NaN 1 Median NaN NaN NaN 0 0 Median 0.27844 0.505 NaN 1 0 Median 172440000 134670000 37771000 0 0 0 172440000 134670000 37771000 724 760 782 1160 1854 1854 1 ERLYPLRK NKHEENLKTKKQQRKERLYPLRKYAVKA__ TKKQQRKERLYPLRKYAVKA__________ K E R R K Y 0 2 0 0 0 0 1 0 0 0 2 1 0 0 1 0 0 0 1 0 0 0 8 2 1073.6346 P42766 P42766 111 118 RPL35 60S ribosomal protein L35 yes yes 2;3 0.01097 42.599 2 1 0.81098 0.98607 61.02 3 Median 0.81579 1.0028 2.3764 2 0 Median 0.25633 0.34864 NaN 1 0 Median 67803000 41509000 26294000 41360000 22305000 19054000 26443000 19204000 7239600 725 760 783 1161;1162;1163 1855;1856;1857;1858;1859 1856 5 ERNGLSLAALK PPVSELITKAVAASKERNGLSLAALKKALA AASKERNGLSLAALKKALAAGGYDVEKNNS K E R L K K 2 1 1 0 0 0 1 1 0 0 3 1 0 0 0 1 0 0 0 0 0 0 11 1 1170.6721 P16401 P16401 56 66 HIST1H1B Histone H1.5 yes yes 2 0.010048 64.439 1 0.42628 0.566 NaN 1 Median NaN NaN NaN 0 0 Median 0.42628 0.566 NaN 1 0 Median 9127500 5573800 3553700 0 0 0 9127500 5573800 3553700 726 738 784 1164 1860 1860 1 ERNGLSLAALKK PPVSELITKAVAASKERNGLSLAALKKALA ASKERNGLSLAALKKALAAGGYDVEKNNSR K E R K K A 2 1 1 0 0 0 1 1 0 0 3 2 0 0 0 1 0 0 0 0 0 0 12 2 1298.767 P16401 P16401 56 67 HIST1H1B Histone H1.5 yes yes 3 0.0053425 39.016 2 0.37881 0.53362 4.3125 2 Median NaN NaN NaN 0 0 Median 0.37881 0.53362 4.3125 2 0 Median 15288000 10998000 4289500 0 0 0 15288000 10998000 4289500 727 738 785 1165;1166 1861;1862;1863;1864 1861 4 ERNLQDPVPKESPK GTASKKKQITPSQCKERNLQDPVPKESPKS KERNLQDPVPKESPKSCFFDSRSKSLPSPH K E R P K S 0 1 1 1 0 1 2 0 0 0 1 2 0 0 3 1 0 0 0 1 0 0 14 2 1635.858 A0A087X0P0;Q02224 A0A087X0P0 2591 2604 CENPE Kinesin-like protein;Centromere-associated protein E yes no 3 0.00048968 57.366 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 728 203 786 1167 1865;1866 1865 285 0 ERPPEEVAAR PTPALSEEASSSSIRERPPEEVAARLAQQE SSSIRERPPEEVAARLAQQEKQEQVKIESL R E R A R L 2 2 0 0 0 0 3 0 0 0 0 0 0 0 2 0 0 0 0 1 0 0 10 1 1152.5887 Q05DN3;B4DS66;B4DKR1;Q16891;Q3B7X4;A0A087WYS0;B4E2B5;C9J406;B9A067;B4DQY2 Q05DN3 193 202 IMMT MICOS complex subunit MIC60 yes no 2 0.013489 58.37 1 2.6096 4.2251 NaN 1 Median NaN NaN NaN 0 0 Median 2.6096 4.2251 NaN 1 0 Median 16007000 5663000 10344000 0 0 0 16007000 5663000 10344000 729 472 787 1168 1867 1867 1 ERSDSGGSSSEPFDR DFYPPGVHPSGLVPRERSDSGGSSSEPFDR ERSDSGGSSSEPFDRHAPAMLRERGTPPVD R E R D R H 0 2 0 2 0 0 2 2 0 0 0 0 0 1 1 5 0 0 0 0 0 0 15 1 1611.6761 P48634 P48634 757 771 PRRC2A Protein PRRC2A yes yes 2 0.0076878 44.252 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 730 766 788 1169 1868 1868 1234 0 ERSGVSLAALK PPVSELITKVVAASKERSGVSLAALKKALA AASKERSGVSLAALKKALAAAGYDVEKNNS K E R L K K 2 1 0 0 0 0 1 1 0 0 2 1 0 0 0 2 0 0 0 1 0 0 11 1 1129.6455 P16403;Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402 Q4VB24 53 63 HIST1H1C;HIST1H1E;HIST1H1D Histone H1.2;Histone H1.4;Histone H1.3 no no 2;3 3.1297E-20 120.59 2 4 0.70861 1.1537 20.637 3 Plateau 0.84522 1.1012 NaN 1 0 Median 0.64339 0.95483 26.76 2 0 Median 476220000 277590000 198630000 34489000 19491000 14998000 441730000 258100000 183630000 731 308;739 789;790 1170;1171;1172;1173;1174;1175 1869;1870;1871;1872;1873;1874;1875;1876;1877 1871 459 5 ERSGVSLAALKK PPVSELITKVVAASKERSGVSLAALKKALA ASKERSGVSLAALKKALAAAGYDVEKNNSR K E R K K A 2 1 0 0 0 0 1 1 0 0 2 2 0 0 0 2 0 0 0 1 0 0 12 2 1257.7405 P16403;Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402 Q4VB24 53 64 HIST1H1C;HIST1H1E;HIST1H1D Histone H1.2;Histone H1.4;Histone H1.3 no no 3 0.00029866 67.102 1 1 0.7014 1.0018 NaN 1 Median NaN NaN NaN 0 0 Median 0.7014 1.0018 NaN 1 0 Median 46582000 26523000 20060000 0 0 0 46582000 26523000 20060000 732 308;739 791;792 1176;1177 1878;1879;1880;1881 1879 459 2 ERSPALKSPLQSVVVR GSASRASAVSELSPRERSPALKSPLQSVVV RSPALKSPLQSVVVRRRSPRPSPVPKPSPP R E R V R R 1 2 0 0 0 1 1 0 0 0 2 1 0 0 2 3 0 0 0 3 0 0 16 2 1765.021 Q9Y2W1;Q7Z5U1;Q05D20;Q6P0P7;Q6PJV4 Q9Y2W1 246 261 THRAP3 Thyroid hormone receptor-associated protein 3 yes no 3 1.8787E-36 127.01 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 733 963 793 1178 1882;1883;1884 1884 1740;1741 0 ERVEAGDVIYIEANSGAVK KQLKLDPSIFESLQKERVEAGDVIYIEANS AGDVIYIEANSGAVKRQGRCDTYATEFDLE K E R V K R 3 1 1 1 0 0 3 2 0 2 0 1 0 0 0 1 0 0 1 3 0 0 19 1 2019.0273 B5BUB1;Q9Y265;H7C4I3;E7ETR0;B3KRS7 B5BUB1 183 201 RUVBL1 RuvB-like 1 yes no 3 0.00088826 36.923 3 3 0.80301 1.0194 33.973 2 Median 0.63433 0.80174 NaN 1 0 Median 1.0165 1.2963 NaN 1 0 Median 19493000 15150000 4342200 4180000 2544800 1635300 15312000 12606000 2706900 734 530 794 1179;1180;1181;1182;1183;1184 1885;1886;1887;1888;1889;1890 1885 6 ERVMEIVDADEK KAASITSEVFNKFFKERVMEIVDADEKVRH FFKERVMEIVDADEKVRHSKLAESVEKAIE K E R E K V 1 1 0 2 0 0 3 0 0 1 0 1 1 0 0 0 0 0 0 2 0 0 12 1 1432.6868 Q9Y5B9;Q0VGA3 Q9Y5B9 200 211 SUPT16H FACT complex subunit SPT16 yes no 2 0.00087444 66.262 1 0.71328 1.0804 NaN 1 Median NaN NaN NaN 0 0 Median 0.71328 1.0804 NaN 1 0 Median 27909000 17106000 10803000 0 0 0 27909000 17106000 10803000 735 967 795 1185 1891;1892 1892 232 2 ESADGLQGETQLLVSR YCRKSGLQTDYATEKESADGLQGETQLLVS SADGLQGETQLLVSRKSRPKSGGSGHAVAE K E S S R K 1 1 0 1 0 2 2 2 0 0 3 0 0 0 0 2 1 0 0 1 0 0 16 0 1701.8533 P46013 P46013 275 290 MKI67 Antigen KI-67 yes yes 2 0.00074668 55.291 1 1 1.0262 1.3175 22.003 2 Median 0.87765 1.1277 NaN 1 0 Median 1.1999 1.5393 NaN 1 0 Median 26157000 13454000 12703000 7872700 4447500 3425200 18284000 9006600 9277600 736 762 796 1186;1187 1893;1894;1895;1896 1896 4 ESAQAIEDLAGFKDPAAGHTEESMTDDK AASVTGSRRRPRAPRESAQAIEDLAGFKDP DPAAGHTEESMTDDKTTKIPCKSSPELEDT R E S D K T 5 0 0 4 0 1 4 2 1 1 1 2 1 1 1 2 2 0 0 0 0 0 28 1 2962.3138 P46013 P46013 2792 2819 MKI67 Antigen KI-67 yes yes 4 1.2716E-09 40.094 1 0.92461 1.1324 NaN 1 Median NaN NaN NaN 0 0 Median 0.92461 1.1324 NaN 1 0 Median 25924000 12987000 12937000 0 0 0 25924000 12987000 12937000 737 762 797 1188 1897 1897 175 1 ESAWSPPPIEIR IRTSKTKQASKNTEKESAWSPPPIEIRLIS TEKESAWSPPPIEIRLISPLASPADGVKSK K E S I R L 1 1 0 0 0 0 2 0 0 2 0 0 0 0 3 2 0 1 0 0 0 0 12 0 1380.7038 Q8WYP5 Q8WYP5 2208 2219 AHCTF1 Protein ELYS yes yes 2 0.00014913 69.03 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 738 897 798 1189 1898 1898 1521 0 ESDGFREEK EGLKYKSKVSLKGNRESDGFREEKNYKLKE SLKGNRESDGFREEKNYKLKETGYVVERPS R E S E K N 0 1 0 1 0 0 3 1 0 0 0 1 0 1 0 1 0 0 0 0 0 0 9 1 1095.4833 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 Q6DCA8 449 457 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 0.0015857 72.23 1 0.74433 1.01 NaN 1 Median NaN NaN NaN 0 0 Median 0.74433 1.01 NaN 1 0 Median 11482000 7851600 3630600 0 0 0 11482000 7851600 3630600 739 622 799 1190 1899;1900 1899 2 ESDQTLAALLSPK NNLVSKDTEEPLPVKESDQTLAALLSPKES VKESDQTLAALLSPKESSGGEKEVPPPPKE K E S P K E 2 0 0 1 0 1 1 0 0 0 3 1 0 0 1 2 1 0 0 0 0 0 13 0 1371.7246 P18583;H7C1M2 P18583 1687 1699 SON Protein SON yes no 2 1.164E-06 96.414 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 740 743 800 1191 1901;1902;1903;1904 1904 1159 0 ESEDKPEIEDVGSDEEEEKK EEKEDKEEEKEKEEKESEDKPEIEDVGSDE PEIEDVGSDEEEEKKDGDKKKKKKIKEKYI K E S K K D 0 0 0 3 0 0 8 1 0 1 0 3 0 0 1 2 0 0 0 1 0 0 20 2 2320.0078 Q2VPJ6;K9JA46;P07900;Q8TBA7;Q86U12;O75322 Q2VPJ6 251 270 HSP90AA1;EL52 Heat shock protein HSP 90-alpha yes no 3 1.9775E-16 83.115 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 741 688 801 1192 1905;1906 1905 1020 0 ESEDSDEENDFTEK SAKEIPEDVDMEEEKESEDSDEENDFTEKV KESEDSDEENDFTEKVQDTSNTGLGEDIIH K E S E K V 0 0 1 3 0 0 5 0 0 0 0 1 0 1 0 2 1 0 0 0 0 0 14 0 1672.6224 A8K330;Q8IWA0;Q05D27 A8K330 778 791 WDR75 WD repeat-containing protein 75 yes no 2 0.003749 44.612 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 742 347 802 1193 1907 1907 524 0 ESEEGNPVRGSEEDSPKK EGCPKRGFEGSCSQKESEEGNPVRGSEEDS EGNPVRGSEEDSPKKESKKKTLKNDCEENG K E S K K E 0 1 1 1 0 0 5 2 0 0 0 2 0 0 2 3 0 0 0 1 0 0 18 2 1972.8974 O43719;B4DRS4 O43719 484 501 HTATSF1 HIV Tat-specific factor 1 yes no 3 7.5811E-08 62.064 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 743 702 803 1194 1908 1908 1033 0 ESEITDEDIDGILER LQMIRHGATHVFASKESEITDEDIDGILER ESEITDEDIDGILERGAKKTAEMNEKLSKM K E S E R G 0 1 0 3 0 0 4 1 0 3 1 0 0 0 0 1 1 0 0 0 0 0 15 0 1732.8003 B7ZAX9;B4DZC0;O60264 B7ZAX9 609 623 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes no 2 5.8504E-18 107.18 1 1 2.2798 2.9205 0.4989 2 Median 2.3133 2.9308 NaN 1 0 Median 2.2468 2.9102 NaN 1 0 Median 19604000 6375800 13228000 5625900 1873200 3752700 13978000 4502600 9475200 744 510 804 1195;1196 1909;1910 1909 2 ESEQESEEEILAQK TAKKVEGNKGTKSLKESEQESEEEILAQKK KESEQESEEEILAQKKEQREEEVEEEEKEE K E S Q K K 1 0 0 0 0 2 6 0 0 1 1 1 0 0 0 2 0 0 0 0 0 0 14 0 1647.7475 B2R6A9;Q9BW71 B2R6A9 222 235 HIRIP3 HIRA-interacting protein 3 yes no 2 0.00024961 62.891 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 745 403 805 1197;1198 1911;1912 1911 596;597 0 ESESEDSSDDEPLIK ADSSTTKKNQNSSKKESESEDSSDDEPLIK ESESEDSSDDEPLIKKLKKPPTDEELKETI K E S I K K 0 0 0 3 0 0 4 0 0 1 1 1 0 0 1 4 0 0 0 0 0 0 15 0 1678.7057 P35659;B4DFG0;B4DNW3;H0Y993 P35659 300 314 DEK Protein DEK yes no 2 6.7618E-286 215.61 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 746 754 806;807 1199;1200;1201;1202 1913;1914;1915;1916;1917;1918;1919;1920;1921;1922;1923 1918 1177;1178;1179 0 ESESEDSSDDEPLIKK ADSSTTKKNQNSSKKESESEDSSDDEPLIK SESEDSSDDEPLIKKLKKPPTDEELKETIK K E S K K L 0 0 0 3 0 0 4 0 0 1 1 2 0 0 1 4 0 0 0 0 0 0 16 1 1806.8007 P35659;B4DFG0;B4DNW3;H0Y993 P35659 300 315 DEK Protein DEK yes no 2 2.141E-07 80.746 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 747 754 808 1203;1204 1924;1925 1924 1177;1178;1179 0 ESESESDETPPAAPQLIK PQVVAEAAKTAKRKRESESESDETPPAAPQ SESDETPPAAPQLIKKEKKKSKKDKKAKAG R E S I K K 2 0 0 1 0 1 4 0 0 1 1 1 0 0 3 3 1 0 0 0 0 0 18 0 1926.9058 O60832 O60832 450 467 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 2 6.0193E-235 196.33 4 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 748 706 809;810 1205;1206;1207;1208 1926;1927;1928;1929;1930;1931 1929 1050;1051;1052 0 ESGSTLDLSGSR ASASKEKETSAEKSKESGSTLDLSGSRETP KSKESGSTLDLSGSRETPSSILLGSNQGSV K E S S R E 0 1 0 1 0 0 1 2 0 0 2 0 0 0 0 4 1 0 0 0 0 0 12 0 1207.5681 A0A087WYS3;H7C4X9;A0A087WVZ6;Q9ULU4 A0A087WYS3 989 1000 ZMYND8 Protein kinase C-binding protein 1 yes no 2 0.0012075 64.104 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 749 190 811 1209;1210 1932;1933;1934 1932 272 0 ESLGSEEESGKDWDELEEEAR DEDYSSEAEESDYSKESLGSEEESGKDWDE EESGKDWDELEEEARKADRESRYEEEEEQS K E S A R K 1 1 0 2 0 0 8 2 0 0 2 1 0 0 0 3 0 1 0 0 0 0 21 1 2423.0248 Q9Y5B9 Q9Y5B9 978 998 SUPT16H FACT complex subunit SPT16 yes yes 3 3.2814E-16 78.202 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 750 967 812 1211 1935 1935 1753 0 ESLPPAAEPSPVSK LTCLGVWLDKVADMKESLPPAAEPSPVSKE KESLPPAAEPSPVSKEQSKIGKKEPGDTVH K E S S K E 2 0 0 0 0 0 2 0 0 0 1 1 0 0 4 3 0 0 0 1 0 0 14 0 1407.7246 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 311 324 PAK1IP1 p21-activated protein kinase-interacting protein 1 yes no 2 5.2149E-05 85.909 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 751 270 813 1212;1213 1936;1937;1938;1939;1940;1941;1942;1943;1944;1945 1936 370 0 ESLTSFYQEEIQER ELLEEMYEEKLNILKESLTSFYQEEIQERD KESLTSFYQEEIQERDEKIEELEALLQEAR K E S E R D 0 1 0 0 0 2 4 0 0 1 1 0 0 1 0 2 1 0 1 0 0 0 14 0 1757.8108 O95235 O95235 631 644 KIF20A Kinesin-like protein KIF20A yes yes 2 3.7002E-07 98.942 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 752 716 814 1214 1946;1947 1947 1949 0 ESPSLEDEETKKEEETPK PVLLKNSSQQDNSSRESPSLEDEETKKEEE SLEDEETKKEEETPKQEEQKESEKMKSEEQ R E S P K Q 0 0 0 1 0 0 7 0 0 0 1 3 0 0 2 2 2 0 0 0 0 0 18 2 2103.9696 Q96T23;H0YER1;H0YCN2;Q05DG0 Q96T23 226 243 RSF1 Remodeling and spacing factor 1 yes no 3 0.003175 18.784 1 0.93659 1.3525 NaN 1 Median NaN NaN NaN 0 0 Median 0.93659 1.3525 NaN 1 0 Median 7031100 3502500 3528500 0 0 0 7031100 3502500 3528500 753 910 815 1215 1948 1948 1 ESPTQISIGAFPSTK GDSQHSASSANVFPKESPTQISIGAFPSTK ESPTQISIGAFPSTKISEAPFLHPAPRSRS K E S T K I 1 0 0 0 0 1 1 1 0 2 0 1 0 1 2 3 2 0 0 0 0 0 15 0 1561.7988 Q5VWN6;Q6IPC8 Q5VWN6 2008 2022 FAM208B;C10orf18 Protein FAM208B yes no 2 0.00025171 62.378 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 754 852 816 1216;1217 1949;1950;1951 1951 1405;2007 0 ESQVNFQEGQLNSGK LEKTKQKISHELQVKESQVNFQEGQLNSGK ESQVNFQEGQLNSGKKQIEKLEQELKRCKS K E S G K K 0 0 2 0 0 3 2 2 0 0 1 1 0 1 0 2 0 0 0 1 0 0 15 0 1663.7802 P49454 P49454 94 108 CENPF Centromere protein F yes yes 2 0.00060635 50.843 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 755 768 817 1218 1952;1953 1952 1237 0 ESRSPQQSAALPR ELPEASAPKAALEPKESRSPQQSAALPRRY PKESRSPQQSAALPRRYMLREREGAPEPAS K E S P R R 2 2 0 0 0 2 1 0 0 0 1 0 0 0 2 3 0 0 0 0 0 0 13 1 1425.7324 A0A0A6YYG7;Q6IBW4;E5RJN3 A0A0A6YYG7 281 293 NCAPH2 Condensin-2 complex subunit H2 yes no 3 5.5293E-05 85.473 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 756 230 818 1219;1220 1954;1955;1956;1957;1958;1959;1960 1957 325;326 0 ESRYEEEEEQSR KDWDELEEEARKADRESRYEEEEEQSRSMS ADRESRYEEEEEQSRSMSRKRKASVHSSGR R E S S R S 0 2 0 0 0 1 6 0 0 0 0 0 0 0 0 2 0 0 1 0 0 0 12 1 1569.6543 Q9Y5B9 Q9Y5B9 1003 1014 SUPT16H FACT complex subunit SPT16 yes yes 3 4.1117E-40 110.31 1 1 0.69705 1.0368 14.924 2 Median 0.73537 0.93293 NaN 1 0 Median 0.66073 1.1522 NaN 1 0 Median 65003000 38678000 26325000 5108100 2704700 2403400 59895000 35973000 23922000 757 967 819 1221;1222 1961;1962;1963 1961 3 ESSIIAPAPAEDVDTPPR IGTKTCRQVYEFRVKESSIIAPAPAEDVDT IIAPAPAEDVDTPPRKKKRKHRLWAAHCRK K E S P R K 3 1 0 2 0 0 2 0 0 2 0 0 0 0 4 2 1 0 0 1 0 0 18 0 1863.9214 Q75MP9;F2YMM1;Q75MQ0;S4S3R8;A0A090N8E9;Q15910 Q75MP9 391 408 EZH2 Histone-lysine N-methyltransferase EZH2 yes no 2 4.6021E-10 85.636 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 758 209 820 1223;1224 1964;1965;1966;1967;1968 1967 1813 0 ESSIIAPAPAEDVDTPPRK IGTKTCRQVYEFRVKESSIIAPAPAEDVDT IAPAPAEDVDTPPRKKKRKHRLWAAHCRKI K E S R K K 3 1 0 2 0 0 2 0 0 2 0 1 0 0 4 2 1 0 0 1 0 0 19 1 1992.0164 Q75MP9;F2YMM1;Q75MQ0;S4S3R8;A0A090N8E9;Q15910 Q75MP9 391 409 EZH2 Histone-lysine N-methyltransferase EZH2 yes no 2;3 7.4792E-07 57.175 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 759 209 821 1225;1226;1227 1969;1970;1971;1972 1969 1813 0 ESSIIAPAPAEDVDTPPRKK IGTKTCRQVYEFRVKESSIIAPAPAEDVDT APAPAEDVDTPPRKKKRKHRLWAAHCRKIQ K E S K K K 3 1 0 2 0 0 2 0 0 2 0 2 0 0 4 2 1 0 0 1 0 0 20 2 2120.1113 Q75MP9;F2YMM1;Q75MQ0;S4S3R8;A0A090N8E9;Q15910 Q75MP9 391 410 EZH2 Histone-lysine N-methyltransferase EZH2 yes no 3 4.4143E-09 50.029 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 760 209 822 1228 1973 1973 1813 0 ESSPEKEAEEGCPEK DGGEFEEGASENNAKESSPEKEAEEGCPEK ESSPEKEAEEGCPEKESEEGCPKRGFEGSC K E S E K E 1 0 0 0 1 0 6 1 0 0 0 2 0 0 2 2 0 0 0 0 0 0 15 1 1704.7149 O43719;B4DRS4 O43719 451 465 HTATSF1 HIV Tat-specific factor 1 yes no 2 0.0048841 53.403 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 761 702 823 1229 1974;1975 1975 1034 0 ESSPIPSPTSDRK SEMVNGATEQRTSSKESSPIPSPTSDRKAK SKESSPIPSPTSDRKAKTALPAQSAATLPA K E S R K A 0 1 0 1 0 0 1 0 0 1 0 1 0 0 3 4 1 0 0 0 0 0 13 1 1399.6943 D6W5C0;K9MS24;B2ZZ89;A0A087WUZ3;Q01082;B4DIF8 D6W5C0 2077 2089 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 2 0.0014456 41.838 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 762 185 824 1230 1976 1976 260;261;262 0 ESTLHLVLR QLEDGRTLSDYNIQKESTLHLVLRLRGGAK DYNIQKESTLHLVLRLRGGAKKRKKKSCTT K E S L R L 0 1 0 0 0 0 1 0 1 0 3 0 0 0 0 1 1 0 0 1 0 0 9 0 1066.6135 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;Q8WYN9;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q9UFQ0;Q96C32;Q96MH4;L8B4I8;L8B196;Q96H31;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;Q66K58;Q59EM9;P62987;P0CG47;P0CG48;M0R1M6;M0R2S1 Q5RKT7 64 72 RPS27A;HEL112;UBB;UBC;UBA52;DKFZp434K0435;UbC Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin yes no 2;3 7.3407E-115 164.72 2 0.66606 0.89602 8.4987 2 Median NaN NaN NaN 0 0 Median 0.66606 0.89602 8.4987 2 0 Median 108450000 64410000 44042000 0 0 0 108450000 64410000 44042000 763 417 825 1231;1232 1977;1978;1979;1980 1979 4 ESVFTVEGGHR LKLLLGAGAVAYGVRESVFTVEGGHRAIFF YGVRESVFTVEGGHRAIFFNRIGGVQQDTI R E S H R A 0 1 0 0 0 0 2 2 1 0 0 0 0 1 0 1 1 0 0 2 0 0 11 0 1216.5836 F5H2D2;F5H0C5;F5H3X6;B4DW05;F5GWA7;F5GY37;J3KPX7;Q99623 F5H2D2 38 48 PHB2 Prohibitin-2 yes no 2 0.0061293 65.224 1 1 0.98913 1.3127 58.87 2 Median 0.6786 0.8657 NaN 1 0 Median 1.4418 1.9904 NaN 1 0 Median 66115000 28666000 37450000 10985000 6662600 4322000 55131000 22003000 33128000 764 504 826 1233;1234 1981;1982 1981 2 ESYDDVSSFR FGFGGKKKGSKWNTRESYDDVSSFRAKTAH KWNTRESYDDVSSFRAKTAHGRGLKRPGKK R E S F R A 0 1 0 2 0 0 1 0 0 0 0 0 0 1 0 3 0 0 1 1 0 0 10 0 1203.5044 Q6IB29;H7C2Q8;Q99848 Q6IB29 263 272 EBNA1BP2 Probable rRNA-processing protein EBP2 yes no 2 0.0078731 63.076 2 0.68469 0.87382 NaN 1 Median NaN NaN NaN 0 0 Median 0.68469 0.87382 NaN 1 0 Median 23473000 16524000 6949000 0 0 0 23473000 16524000 6949000 765 674 827 1235;1236 1983;1984 1984 2 ESYFESHNK IPQEIFEYLMDRLEKESYFESHNKGDPNAL MDRLEKESYFESHNKGDPNALVDEDAVCCI K E S N K G 0 0 1 0 0 0 2 0 1 0 0 1 0 1 0 2 0 0 1 0 0 0 9 0 1139.4884 P55201 P55201 255 263 BRPF1 Peregrin yes yes 2 1.8093E-08 104.44 1 0.73149 0.92413 NaN 1 Median NaN NaN NaN 0 0 Median 0.73149 0.92413 NaN 1 0 Median 10438000 6296100 4142000 0 0 0 10438000 6296100 4142000 766 779 828 1237 1985;1986 1986 2 ESYSIYVYK KAQKKDGKKRKRSRKESYSIYVYKVLKQVH RKRSRKESYSIYVYKVLKQVHPDTGISSKA K E S Y K V 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 2 0 0 3 1 0 0 9 0 1150.5546 A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257;Q6DRA6;Q6DN03 A0A024RCJ2 36 44 HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C yes no 2 2.297E-16 93.111 2 5 0.74242 0.93938 3.7692 4 Median 0.78976 0.95538 NaN 1 0 Median 0.73302 0.92364 4.2721 3 0 Median 523640000 303170000 220460000 38883000 23104000 15779000 484750000 280070000 204680000 767 158 829;830 1238;1239;1240;1241;1242;1243;1244 1987;1988;1989;1990;1991;1992;1993;1994;1995;1996;1997;1998;1999;2000;2001;2002;2003 2003 217;218 13 ESYSVYVYK KAQKKDGKKRKRSRKESYSVYVYKVLKQVH RKRSRKESYSVYVYKVLKQVHPDTGISSKA K E S Y K V 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 2 0 0 3 2 0 0 9 0 1136.539 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;P57053 B2R4S9 36 44 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S yes no 1;2 6.8058E-09 104.05 4 2 0.68017 0.82875 9.9174 3 Median 0.70998 0.84944 3.4872 2 0 Median 0.57236 0.71924 NaN 1 0 Median 1411700000 859870000 551780000 278920000 160070000 118850000 1132700000 699800000 432930000 768 10 831;832 1245;1246;1247;1248;1249;1250 2004;2005;2006;2007;2008;2009;2010;2011;2012;2013;2014;2015;2016;2017;2018;2019;2020;2021;2022;2023 2021 14;15 15 ESYTEEIVSEAESHVSGISR PVSSVRKKPKVTPTKESYTEEIVSEAESHV EIVSEAESHVSGISRIVLPTEKTTGARRSK K E S S R I 1 1 0 0 0 0 5 1 1 2 0 0 0 0 0 5 1 0 1 2 0 0 20 0 2208.0182 J3KP30;B7Z854;Q5QJE6;E9PRB3 J3KP30 133 152 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 yes no 3 3.1257E-05 51.834 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 38214000 0 38214000 0 0 0 38214000 0 38214000 769 545 833 1251 2024 2024 1 ETFSSAEGTVDK SQEGSSDDAERKQERETFSSAEGTVDKDTT QERETFSSAEGTVDKDTTIMELRDRLPKKQ R E T D K D 1 0 0 1 0 0 2 1 0 0 0 1 0 1 0 2 2 0 0 1 0 0 12 0 1269.5725 A4LAA3;P46100;A0A096LNL9;B7Z1D8;A0A096LNW1 A4LAA3 886 897 ATRX Transcriptional regulator ATRX yes no 2 0.0033022 51.829 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 770 317 834 1252 2025;2026 2025 472 0 ETLDAGNYDSPLEFCK YRDIIDTPMDFGTVRETLDAGNYDSPLEFC TLDAGNYDSPLEFCKDIRLIFSNAKAYTPN R E T C K D 1 0 1 2 1 0 2 1 0 0 2 1 0 1 1 1 1 0 1 0 0 0 16 0 1857.8091 Q9NSI6;Q5R2U7;H7C409 Q9NSI6 1365 1380 BRWD1;WDR9 Bromodomain and WD repeat-containing protein 1 yes no 2 1.0849E-05 66.262 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 771 938 835 1253 2027;2028;2029 2029 1655 0 ETLEAGNYESPMELCK YRDIIDTPMDFATVRETLEAGNYESPMELC TLEAGNYESPMELCKDVRLIFSNSKAYTPS R E T C K D 1 0 1 0 1 0 4 1 0 0 2 1 1 0 1 1 1 0 1 0 0 0 16 0 1869.8125 Q8WWQ0;Q9NWP3 Q8WWQ0 1368 1383 PHIP PH-interacting protein yes no 2 0.00015725 46.324 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 772 894 836 1254;1255 2030;2031 2031 205 1502;2023 0 ETNLDSLPLVDTHSK RISLPLPNFSSLNLRETNLDSLPLVDTHSK ETNLDSLPLVDTHSKRTLLIKTVETRDGQV R E T S K R 0 0 1 2 0 0 1 0 1 0 3 1 0 0 1 2 2 0 0 1 0 0 15 0 1667.8366 V9HWE1;P08670;Q53HU8 V9HWE1 425 439 HEL113;VIM Vimentin yes no 2 1.0044E-36 128.71 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 773 731 837 1256 2032;2033 2032 1130 0 ETPDPWQSLDPFDSLESK LREREGAPEPASCVKETPDPWQSLDPFDSL DPWQSLDPFDSLESKPFKKGRPYSVPPCVE K E T S K P 0 0 0 3 0 1 2 0 0 0 2 1 0 1 3 3 1 1 0 0 0 0 18 0 2089.948 A0A0A6YYG7;Q6IBW4 A0A0A6YYG7 312 329 NCAPH2 Condensin-2 complex subunit H2 yes no 2 2.4415E-96 135.09 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 774 230 838 1257 2034 2034 328 0 ETPHSPGVEDAPIAK NEEILERPAQLANARETPHSPGVEDAPIAK ETPHSPGVEDAPIAKVGVLAASMEAKASSQ R E T A K V 2 0 0 1 0 0 2 1 1 1 0 1 0 0 3 1 1 0 0 1 0 0 15 0 1546.7627 B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2;F8VQE1 B4DN52 405 419 LIMA1 LIM domain and actin-binding protein 1 yes no 2;3 2.6042E-46 132.97 1 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 775 485 839 1258;1259;1260 2035;2036;2037;2038;2039;2040;2041 2036 702;1882 0 ETPSSILLGSNQGSVSK KSKESGSTLDLSGSRETPSSILLGSNQGSV PSSILLGSNQGSVSKRCDKQPAYAPTTTDH R E T S K R 0 0 1 0 0 1 1 2 0 1 2 1 0 0 1 5 1 0 0 1 0 0 17 0 1702.8737 A0A087WYS3;H7C4X9;A0A087WVZ6 A0A087WYS3 1001 1017 ZMYND8 yes no 2 2.3682E-06 55.864 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 776 190 840 1261;1262 2042;2043;2044 2043 273;274 0 ETQVILLDTPGIISPGK VHTTRCQALGVITEKETQVILLDTPGIISP QVILLDTPGIISPGKQKRHHLELSLLEDPW K E T G K Q 0 0 0 1 0 1 1 2 0 3 2 1 0 0 2 1 2 0 0 1 0 0 17 0 1779.9982 J3QSB2;J3QRV9;O75616 J3QSB2 160 176 ERAL1 GTPase Era, mitochondrial yes no 2 5.4373E-07 66.498 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 777 686 841 1263 2045 2045 1018 0 ETSSTGEEALVAAVR HYVGGPLDALIQGLKETSSTGEEALVAAVR ETSSTGEEALVAAVRCYDDLSRLLWGLEGL K E T V R C 3 1 0 0 0 0 3 1 0 0 1 0 0 0 0 2 2 0 0 2 0 0 15 0 1518.7526 A0A0A0MRW6;B4DF80;Q9H6R4;B3KPN5 A0A0A0MRW6 650 664 NOL6 Nucleolar protein 6 yes no 2 0.00010423 64.55 1 0.84584 1.115 NaN 1 Median NaN NaN NaN 0 0 Median 0.84584 1.115 NaN 1 0 Median 5877000 2873300 3003700 0 0 0 5877000 2873300 3003700 778 215 842 1264 2046;2047 2047 2 ETVNSPAIYK RKDLMDKTQKVKVKKETVNSPAIYKFQSRR VKVKKETVNSPAIYKFQSRRKR________ K E T Y K F 1 0 1 0 0 0 1 0 0 1 0 1 0 0 1 1 1 0 1 1 0 0 10 0 1120.5764 Q9Y3A2 Q9Y3A2 237 246 UTP11L Probable U3 small nucleolar RNA-associated protein 11 yes yes 2 0.0005888 79.659 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 779 965 843 1265;1266 2048;2049 2048 1749 0 ETVSEESNVLCLSK ACIPIKKSDPVVSYRETVSEESNVLCLSKS RETVSEESNVLCLSKSPNKHNRLYMKARPF R E T S K S 0 0 1 0 1 0 3 0 0 0 2 1 0 0 0 3 1 0 0 2 0 0 14 0 1593.7556 Q8TA90;P13639;B4DPU3;Q6W6M8 Q8TA90 240 253 EEF2 Elongation factor 2 yes no 2 0.0029815 41.242 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3364700 0 3364700 0 0 0 3364700 0 3364700 780 736 844 1267 2050 2050 1 ETVYCLNDDDETEVLK TVVDAKTLKKEDIQKETVYCLNDDDETEVL TVYCLNDDDETEVLKEDIIQGFRYGSDIVP K E T L K E 0 0 1 3 1 0 3 0 0 0 2 1 0 0 0 0 2 0 1 2 0 0 16 0 1941.8514 Q53T09;P13010 Q53T09 128 143 XRCC5 X-ray repair cross-complementing protein 5 yes no 2 3.0546E-91 158.4 1 0.55811 0.69723 NaN 1 Median 0.55811 0.69723 NaN 1 0 Median NaN NaN NaN 0 0 Median 17205000 11609000 5596000 17205000 11609000 5596000 0 0 0 781 735 845 1268 2051;2052 2052 2 EVAATEEDVTRLPSPTSPFSSLSQDQAATSK SPDASQLASSLSSQKEVAATEEDVTRLPSP SPFSSLSQDQAATSKATLSSTSGLDLMSES K E V S K A 4 1 0 2 0 2 3 0 0 0 2 1 0 1 3 6 4 0 0 2 0 0 31 1 3248.5685 E9PMS6;B7Z8W3;A0A1P7ZIM8;A0A0A0MTE2;E9PMT2;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMP7;H0Y424 E9PMS6 540 570 LMO7 LIM domain only protein 7 yes no 3 2.9263E-21 55.428 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 782 227 846 1269 2053 2053 316;317;1817 0 EVDEDSEPEREVR APASVVPFVRVKREREVDEDSEPEREVRAK EREVDEDSEPEREVRAKNGRVDSEDRRSRH R E V V R A 0 2 0 2 0 0 5 0 0 0 0 0 0 0 1 1 0 0 0 2 0 0 13 1 1587.7013 F8WC91;B9A018;Q53GS9 F8WC91 77 89 USP39 U4/U6.U5 tri-snRNP-associated protein 2 yes no 3 0.0004451 60.209 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 783 551 847 1270 2054;2055 2054 808 0 EVDYSDSLTEK EEEEKMFGRGSRHRKEVDYSDSLTEKQWLK RHRKEVDYSDSLTEKQWLKAIEEGTLEEIE K E V E K Q 0 0 0 2 0 0 2 0 0 0 1 1 0 0 0 2 1 0 1 1 0 0 11 0 1284.5721 A7E2E1;Q9HBD4;B9EGQ8;A0A0A0MT49;P51532;B4E0F1;B4DSI8;B3KNW7;K7EP28 A7E2E1 1376 1386 SMARCA4 Transcription activator BRG1 yes no 2 8.5044E-40 134.18 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 784 224 848 1271;1272 2056;2057;2058;2059 2058 311 0 EVEDKESEGEEEDEDEDLSK KKYRGKAVGPASILKEVEDKESEGEEEDED ESEGEEEDEDEDLSKYKLDEDEDEDDADLS K E V S K Y 0 0 0 4 0 0 9 1 0 0 1 2 0 0 0 2 0 0 0 1 0 0 20 1 2338.9296 O95218 O95218 147 166 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 3 7.2599E-07 42.711 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 785 715 849 1273 2060 2060 1073 0 EVEIVASSDSSISSK LSGDDSSTCIGILAKEVEIVASSDSSISSK EVEIVASSDSSISSKARGSNKVKIQPVAKY K E V S K A 1 0 0 1 0 0 2 0 0 2 0 1 0 0 0 6 0 0 0 2 0 0 15 0 1536.7519 B7Z7V8;Q6P2E9 B7Z7V8 29 43 EDC4 Enhancer of mRNA-decapping protein 4 yes no 2 1.2734E-26 121.02 1 0.48894 0.57998 NaN 1 Median 0.48894 0.57998 NaN 1 0 Median NaN NaN NaN 0 0 Median 7917900 5210900 2706900 7917900 5210900 2706900 0 0 0 786 544 850 1274 2061 2061 1 EVELVSE DSDTTKKKKKKKKAKEVELVSE________ KKKKKKAKEVELVSE_______________ K E V S E - 0 0 0 0 0 0 3 0 0 0 1 0 0 0 0 1 0 0 0 2 0 0 7 0 803.39126 O60832 O60832 508 514 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 1 0.0034416 52.937 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 787 706 851 1275 2062;2063 2063 1049 0 EVEQFDVATHLQTAPELVDR GKQQNKHVFFFDTKKEVEQFDVATHLQTAP DVATHLQTAPELVDRVFNRPRIETLQKEKV K E V D R V 2 1 0 2 0 2 3 0 1 0 2 0 0 1 1 0 2 0 0 3 0 0 20 0 2296.1335 Q9Y3A2 Q9Y3A2 145 164 UTP11L Probable U3 small nucleolar RNA-associated protein 11 yes yes 3 0.025567 22.313 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1845600 1845600 0 0 0 0 1845600 1845600 0 788 965 852 1276 2064 2064 1 EVIEIEDASPTK RKRIAEREREREKLREVIEIEDASPTKCPI KLREVIEIEDASPTKCPITTKLVLDEDEET R E V T K C 1 0 0 1 0 0 3 0 0 2 0 1 0 0 1 1 1 0 0 1 0 0 12 0 1329.6664 A4LAA3;P46100 A4LAA3 1519 1530 ATRX Transcriptional regulator ATRX yes no 2 5.9479E-176 180.09 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 789 317 853 1277;1278 2065;2066;2067;2068;2069 2065 473;1840 0 EVITAQDTVIK KESVNKAQEEVTKQKEVITAQDTVIKAKYA TKQKEVITAQDTVIKAKYAEVAKHKEQNND K E V I K A 1 0 0 1 0 1 1 0 0 2 0 1 0 0 0 0 2 0 0 2 0 0 11 0 1215.6711 B7ZLZ7;A0A024R158;O95347;A8K984;B3KMB1;B3KM27 B7ZLZ7 880 890 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 yes no 2 0.0093123 48.44 1 1 0.6955 0.85359 4.1362 2 Median 0.75368 0.87892 NaN 1 0 Median 0.64181 0.82898 NaN 1 0 Median 19533000 10454000 9079500 2638900 1480500 1158500 16894000 8973100 7921000 790 27 854 1279;1280 2070;2071 2071 2 EVKEEIDPDEEESAK KGKSGPNTQNEDIEKEVKEEIDPDEEESAK EVKEEIDPDEEESAKKKHLDKKRKLKEMFD K E V A K K 1 0 0 2 0 0 6 0 0 1 0 2 0 0 1 1 0 0 0 1 0 0 15 1 1745.7843 Q14692 Q14692 808 822 BMS1 Ribosome biogenesis protein BMS1 homolog yes yes 2 0.0014215 60.307 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 791 817 855 1281;1282 2072;2073;2074 2074 1348 0 EVKEEIDPDEEESAKK KGKSGPNTQNEDIEKEVKEEIDPDEEESAK VKEEIDPDEEESAKKKHLDKKRKLKEMFDA K E V K K K 1 0 0 2 0 0 6 0 0 1 0 3 0 0 1 1 0 0 0 1 0 0 16 2 1873.8793 Q14692 Q14692 808 823 BMS1 Ribosome biogenesis protein BMS1 homolog yes yes 3 0.028617 17.931 1 0.74662 1.0782 NaN 1 Median NaN NaN NaN 0 0 Median 0.74662 1.0782 NaN 1 0 Median 5216500 2592200 2624300 0 0 0 5216500 2592200 2624300 792 817 856 1283 2075 2075 1 EVNFTSELRK DERIKQHPKNQEEYKEVNFTSELRKHPSSP QEEYKEVNFTSELRKHPSSPARVTKGCTIV K E V R K H 0 1 1 0 0 0 2 0 0 0 1 1 0 1 0 1 1 0 0 1 0 0 10 1 1221.6354 B3KM90;Q643R0;Q9ULW0 B3KM90 141 150 HCTP4;TPX2 Targeting protein for Xklp2 yes no 2 0.019074 39.622 1 0.67486 1.0153 NaN 1 Median NaN NaN NaN 0 0 Median 0.67486 1.0153 NaN 1 0 Median 26101000 15595000 10507000 0 0 0 26101000 15595000 10507000 793 427 857 1284 2076 2076 0 EVNSQEEEEEELLRK EQFALALKMSEQEAREVNSQEEEEEELLRK EVNSQEEEEEELLRKAIAESLNSCRPSDAS R E V R K A 0 1 1 0 0 1 7 0 0 0 2 1 0 0 0 1 0 0 0 1 0 0 15 1 1859.8749 D6RC40;D6RCQ3;A0A024R7R0;Q96RL1 D6RC40 98 112 UIMC1;RAP80 BRCA1-A complex subunit RAP80 yes no 3 0.00013912 51.971 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 794 94 858 1285 2077 2077 134 0 EVQSPEGMISLR FRIRVAYQREPQILKEVQSPEGMISLRDTA ILKEVQSPEGMISLRDTAASLRLERDTRQL K E V L R D 0 1 0 0 0 1 2 1 0 1 1 0 1 0 1 2 0 0 0 1 0 0 12 0 1344.6708 A0A0A0MRW6;B4DF80;Q9H6R4;B3KPN5 A0A0A0MRW6 808 819 NOL6 Nucleolar protein 6 yes no 2 8.2365E-14 110.15 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 795 215 859 1286 2078;2079 2079 43 295 0 EVSDDEAEEKEDKEEEK IGYPITLFVEKERDKEVSDDEAEEKEDKEE SDDEAEEKEDKEEEKEKEEKESEDKPEIED K E V E K E 1 0 0 3 0 0 8 0 0 0 0 3 0 0 0 1 0 0 0 1 0 0 17 2 2036.8546 Q2VPJ6;K9JA46;P07900;Q8TBA7;Q86U12;O75322 Q2VPJ6 229 245 HSP90AA1;EL52 Heat shock protein HSP 90-alpha yes no 3 2.2011E-20 108.14 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 796 688 860 1287 2080;2081 2080 1021 0 EVSIEDTGVDVDPEK GENMEKSCASKEEVKEVSIEDTGVDVDPEK EVSIEDTGVDVDPEKLEMESKLHRNLLFQD K E V E K L 0 0 0 3 0 0 3 1 0 1 0 1 0 0 1 1 1 0 0 3 0 0 15 0 1630.7574 B2RMQ4;Q8WWK9 B2RMQ4 531 545 CKAP2 Cytoskeleton-associated protein 2 yes no 2 3.4896E-109 165.49 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 797 419 861 1288;1289 2082;2083;2084;2085 2083 617 0 EVSPLQPVNENMQVNK ______________________________ VSPLQPVNENMQVNKIKKNEDAKKRLSVER M E V N K I 0 0 3 0 0 2 2 0 0 0 1 1 1 0 2 1 0 0 0 3 0 0 16 0 1824.904 P11388 P11388 2 17 TOP2A DNA topoisomerase 2-alpha yes yes 2 0.00098976 41.838 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 798 734 862 1290 2086 2086 157 1138 0 EVVCTTQNTPTVK GGSKSLLPDFLQTPKEVVCTTQNTPTVKKS PKEVVCTTQNTPTVKKSRDTALKKLEFSSS K E V V K K 0 0 1 0 1 1 1 0 0 0 0 1 0 0 1 0 4 0 0 3 0 0 13 0 1475.729 H0YNU5;B2RAN0;P54132;Q3B7X0;H0YLV8 H0YNU5 117 129 BLM Bloom syndrome protein yes no 2 0.0019428 46.069 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 799 412 863 1291 2087 2087 1872 0 EVYELLDSPGK EVLNIGKKLYEGKTKEVYELLDSPGKVLLQ GKTKEVYELLDSPGKVLLQSKDQITAGNAA K E V G K V 0 0 0 1 0 0 2 1 0 0 2 1 0 0 1 1 0 0 1 1 0 0 11 0 1248.6238 B4DGX3;E9PBS1;A0A024RD93;P22234 B4DGX3 20 30 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 2 2.0739E-39 131.13 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 800 168 864 1292;1293 2088;2089;2090;2091;2092;2093 2090 231 0 EWLTNFMEDRR AISLAFSKKQIDDRKEWLTNFMEDRRQRKL DDRKEWLTNFMEDRRQRKLLGLPEDYLYGQ K E W R R Q 0 2 1 1 0 0 2 0 0 0 1 0 1 1 0 0 1 1 0 0 0 0 11 1 1495.6878 P11388;Q02880;Q71UH4;Q59H80;B4DKD0;E9PCY5 P11388 663 673 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2-beta;DNA topoisomerase 2 no no 3 0.0012382 54.259 1 0.53462 0.90828 NaN 1 Median NaN NaN NaN 0 0 Median 0.53462 0.90828 NaN 1 0 Median 29715000 20736000 8979600 0 0 0 29715000 20736000 8979600 801 734;796 865 1294 2094 2094 158 1 EWYGWHFPELGK DDLDKELNNYIMRCREWYGWHFPELGKIIS RCREWYGWHFPELGKIISDNLTYCKCLQKV R E W G K I 0 0 0 0 0 0 2 2 1 0 1 1 0 1 1 0 0 2 1 0 0 0 12 0 1547.7197 Q9Y2X3;B3KN82;H7BZ72 Q9Y2X3 185 196 NOP58 Nucleolar protein 58 yes no 3 0.010423 29.689 1 0.43469 0.5612 NaN 1 Median NaN NaN NaN 0 0 Median 0.43469 0.5612 NaN 1 0 Median 3411100 2534000 877050 0 0 0 3411100 2534000 877050 802 964 866 1295 2095 2095 1 EYFADMKR KYYKGLGTSTSKEAKEYFADMKRHRIQFKY STSKEAKEYFADMKRHRIQFKYSGPEDDAA K E Y K R H 1 1 0 1 0 0 1 0 0 0 0 1 1 1 0 0 0 0 1 0 0 0 8 1 1058.4855 P11388 P11388 626 633 TOP2A DNA topoisomerase 2-alpha yes yes 2 3.7375E-05 92.47 1 0.51826 0.80575 NaN 1 Median NaN NaN NaN 0 0 Median 0.51826 0.80575 NaN 1 0 Median 58328000 37835000 20493000 0 0 0 58328000 37835000 20493000 803 734 867 1296 2096;2097 2097 159 2 EYFDDSTEER SGNSDGGEEFCEEEKEYFDDSTEERFYKQS CEEEKEYFDDSTEERFYKQSSMSEDSDSGD K E Y E R F 0 1 0 2 0 0 3 0 0 0 0 0 0 1 0 1 1 0 1 0 0 0 10 0 1289.5048 Q8NEF9 Q8NEF9 259 268 SRFBP1 Serum response factor-binding protein 1 yes yes 2 0.0030589 58.781 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 804 888 868 1297 2098 2098 1494 0 EYGFCIMDNHK EEKLKIKEENEKLLKEYGFCIMDNHKERIA KLLKEYGFCIMDNHKERIANFKIEPPGLFR K E Y H K E 0 0 1 1 1 0 1 1 1 1 0 1 1 1 0 0 0 0 1 0 0 0 11 0 1412.5853 P11387;B9EG90 P11387 337 347 TOP1 DNA topoisomerase 1 yes no 2 0.025574 43.308 1 0.64016 0.83211 NaN 1 Median NaN NaN NaN 0 0 Median 0.64016 0.83211 NaN 1 0 Median 16272000 9274800 6997300 0 0 0 16272000 9274800 6997300 805 733 869 1298 2099 2099 153 1 EYHTDTTVK LNGTEKTPPLITDYREYHTDTTVKFVVKMT LITDYREYHTDTTVKFVVKMTEEKLAEAER R E Y V K F 0 0 0 1 0 0 1 0 1 0 0 1 0 0 0 0 3 0 1 1 0 0 9 0 1092.5088 P11388;Q02880;Q59H80;B4DKD0;E9PCY5;Q6W6M6 P11388 959 967 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2-beta;DNA topoisomerase 2 no no 2 1.1441E-05 98.033 1 0.75568 0.93446 NaN 1 Median NaN NaN NaN 0 0 Median 0.75568 0.93446 NaN 1 0 Median 25833000 13787000 12047000 0 0 0 25833000 13787000 12047000 806 734;796 870 1299 2100;2101 2100 2 EYIPGQPPLSQSSDSSPTR CLLSLKAQYKEKTGKEYIPGQPPLSQSSDS GQPPLSQSSDSSPTRNSEPAGLETPEAKVL K E Y T R N 0 1 0 1 0 2 1 1 0 1 1 0 0 0 4 5 1 0 1 0 0 0 19 0 2044.9702 V9GYZ6;Q3KQZ8;B4DKX5;P07814 V9GYZ6 878 896 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 2 1.1404E-16 80.585 1 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 807 476 871;872 1300;1301;1302 2102;2103;2104;2105;2106 2105 686;687;688;689;690 0 EYIPGQPPLSQSSDSSPTRNSEPAGLETPEAK CLLSLKAQYKEKTGKEYIPGQPPLSQSSDS TRNSEPAGLETPEAKVLFDKVASQGEVVRK K E Y A K V 2 1 1 1 0 2 4 2 0 1 2 1 0 0 6 6 2 0 1 0 0 0 32 1 3368.6008 V9GYZ6;Q3KQZ8;B4DKX5;P07814 V9GYZ6 878 909 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 3 4.4475E-12 43.444 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 808 476 873 1303 2107 2107 686;687;688;689;690 0 EYRDLTTAGAVTQCYR WLRYDSRSGTHNMYREYRDLTTAGAVTQCY YRDLTTAGAVTQCYRDMGARHRARAHSIQI R E Y Y R D 2 2 0 1 1 1 1 1 0 0 1 0 0 0 0 0 3 0 2 1 0 0 16 1 1902.8894 M0R0P7;M0R3D6;M0R1A7;M0R117;B4DM74;B2R4C0;Q02543;Q32XH3 M0R0P7 57 72 RPL18A 60S ribosomal protein L18a yes no 3 0.00032265 50.608 1 1 0.54331 0.7315 33.173 2 Median 0.71199 0.92489 NaN 1 0 Median 0.41459 0.57855 NaN 1 0 Median 28900000 16674000 12226000 22171000 12800000 9371500 6728700 3873700 2854900 809 397 874 1304;1305 2108;2109;2110 2109 3 EYTINIHK EKKKGRSAINEVVTREYTINIHKRIHGVGF INEVVTREYTINIHKRIHGVGFKKRAPRAL R E Y H K R 0 0 1 0 0 0 1 0 1 2 0 1 0 0 0 0 1 0 1 0 0 0 8 0 1016.5291 B2R4C1;P62899;B8ZZK4;H7C2W9;C9JU56;B7Z4E3;B7Z4C8 B2R4C1 24 31 RPL31 60S ribosomal protein L31 yes no 2 0.0063028 77.674 1 1 0.61571 0.76474 58.392 2 Median 0.94355 1.1557 NaN 1 0 Median 0.40177 0.50605 NaN 1 0 Median 230070000 159270000 70802000 28986000 15359000 13627000 201080000 143910000 57175000 810 398 875 1306;1307 2111;2112;2113;2114;2115;2116 2116 6 EYTINIHKR EKKKGRSAINEVVTREYTINIHKRIHGVGF NEVVTREYTINIHKRIHGVGFKKRAPRALK R E Y K R I 0 1 1 0 0 0 1 0 1 2 0 1 0 0 0 0 1 0 1 0 0 0 9 1 1172.6302 B2R4C1;P62899;B8ZZK4;H7C2W9;C9JU56;B7Z4E3;B7Z4C8 B2R4C1 24 32 RPL31 60S ribosomal protein L31 yes no 3 0.017896 23.354 1 0.9642 1.2423 NaN 1 Median 0.9642 1.2423 NaN 1 0 Median NaN NaN NaN 0 0 Median 9816200 4743200 5073000 9816200 4743200 5073000 0 0 0 811 398 876 1308 2117 2117 1 FAAHISPAQGSPKPPPAASPGVR HQKVREYLSETYGNKFAAHISPAQGSPKPP QGSPKPPPAASPGVRAGHVLSSSAGNSAPN K F A V R A 5 1 0 0 0 1 0 2 1 1 0 1 0 1 6 3 0 0 0 1 0 0 23 1 2239.1862 A0A1B0GXL9;B1AKB4;A0A024RCY3;B4DPL3;B0QYS6;B0QYS7;P19484;B1AKB1;B1AKB2 A0A1B0GXL9 104 126 TFEB Transcription factor EB yes no 3 1.1181E-08 46.783 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 812 165 877 1309 2118 2118 227;228 0 FAALDNEEEDKEEEIIK GKEEKSKGKAKPQNKFAALDNEEEDKEEEI ALDNEEEDKEEEIIKEKEPPKQGKEKAKKA K F A I K E 2 0 1 2 0 0 6 0 0 2 1 2 0 1 0 0 0 0 0 0 0 0 17 1 2020.9477 Q5STZ8;B4DNU2;Q2L6I2;Q8NE71 Q5STZ8 194 210 ABCF1 ATP-binding cassette sub-family F member 1 yes no 3 0.020816 20.65 1 0.51322 0.63857 NaN 1 Median NaN NaN NaN 0 0 Median 0.51322 0.63857 NaN 1 0 Median 11541000 7033100 4508100 0 0 0 11541000 7033100 4508100 813 488 878 1310 2119 2119 0 FADLSEAANR AAKNLQEAEEWYKSKFADLSEAANRNNDAL WYKSKFADLSEAANRNNDALRQAKQESTEY K F A N R N 3 1 1 1 0 0 1 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 10 0 1092.52 V9HWE1;P08670;Q53HU8;B0YJC4;B3KRK8;B0YJC5;Q5JVS8 V9HWE1 295 304 HEL113;VIM Vimentin yes no 2 0.011564 58.433 1 0.64305 0.81394 NaN 1 Median 0.64305 0.81394 NaN 1 0 Median NaN NaN NaN 0 0 Median 5048300 2890900 2157500 5048300 2890900 2157500 0 0 0 814 731 879 1311 2120 2120 0 FAEVECLAESHQHLSK MSEDPSHPSMALNTRFAEVECLAESHQHLS AEVECLAESHQHLSKESMAGNKPANAVLHK R F A S K E 2 0 0 0 1 1 3 0 2 0 2 1 0 1 0 2 0 0 0 1 0 0 16 0 1883.8836 B3KY63;F5GWX5;A0A0C4DGG9;Q14839 B3KY63 1796 1811 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 3 0.0024118 30.536 1 0.87866 1.1236 NaN 1 Median NaN NaN NaN 0 0 Median 0.87866 1.1236 NaN 1 0 Median 17924000 9443500 8481000 0 0 0 17924000 9443500 8481000 815 244 880 1312 2121;2122 2121 2 FAEVTQEVEVARPVDK NPKAEDYEENLQVMRFAEVTQEVEVARPVD AEVTQEVEVARPVDKAICGLTPGRRYRNQP R F A D K A 2 1 0 1 0 1 3 0 0 0 0 1 0 1 1 0 1 0 0 4 0 0 16 1 1815.9367 H7BYN4;Q02241 H7BYN4 429 444 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 yes no 3 0.010794 27.125 1 1.1546 1.6082 NaN 1 Median NaN NaN NaN 0 0 Median 1.1546 1.6082 NaN 1 0 Median 14171000 7265500 6905400 0 0 0 14171000 7265500 6905400 816 672 881 1313 2123 2123 0 FAIQDISVEETSAK NVKMTLGMIWTIILRFAIQDISVEETSAKE RFAIQDISVEETSAKEGL____________ R F A A K E 2 0 0 1 0 1 2 0 0 2 0 1 0 1 0 2 1 0 0 1 0 0 14 0 1536.7672 G3V2E8;G3V5M4;G3V2X9;G3V2W4;B4DRP5;G3V2N5;B7Z4V1;B4DSX0;Q86TX4;B4E337;B7Z2N5;H9KV75;B7Z565;A0A024R694;B2R8Y4;A0A0S2Z3G9;B4DZQ2;A0A087WSZ2;P12814;P35609;Q08043;O43707 G3V2E8 69 82 ACTN1;ACTN3;ACTN2;ACTN4 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-3;Alpha-actinin-4 yes no 2 0.00021305 83 1 0.80089 0.98869 NaN 1 Median 0.80089 0.98869 NaN 1 0 Median NaN NaN NaN 0 0 Median 3844300 2132200 1712100 3844300 2132200 1712100 0 0 0 817 82 882 1314 2124 2124 1 FAQIDEK VEQMKEEKKKQIEQKFAQIDEKTEKAKEER KKKQIEQKFAQIDEKTEKAKEERLAEEKAK K F A E K T 1 0 0 1 0 1 1 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 7 0 849.42323 Q9NQS7;B3KPD3 Q9NQS7 603 609 INCENP Inner centromere protein yes no 2 0.0024315 91.906 1 0.78927 1.0192 NaN 1 Median NaN NaN NaN 0 0 Median 0.78927 1.0192 NaN 1 0 Median 11570000 5824300 5745600 0 0 0 11570000 5824300 5745600 818 932 883 1315 2125;2126 2125 2 FAYKDPEK KETYEALLARFPNLRFAYKDPEKNWNRNCV ARFPNLRFAYKDPEKNWNRNCVKGLVASLI R F A E K N 1 0 0 1 0 0 1 0 0 0 0 2 0 1 1 0 0 0 1 0 0 0 8 1 996.49165 B7ZLZ7;A0A024R158;O95347;A8K984;B3KMB1;Q2KQ72;Q05BV1 B7ZLZ7 508 515 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 yes no 2 0.0091152 80.684 1 0.57529 0.71173 NaN 1 Median NaN NaN NaN 0 0 Median 0.57529 0.71173 NaN 1 0 Median 19744000 12639000 7105000 0 0 0 19744000 12639000 7105000 819 27 884 1316 2127;2128 2128 2 FDHLRK GNSRFLDPRNKISFKFDHLRKEASDPQPEE DPRNKISFKFDHLRKEASDPQPEEADGGLK K F D R K E 0 1 0 1 0 0 0 0 1 0 1 1 0 1 0 0 0 0 0 0 0 0 6 1 814.44497 A8K0T9;A0A024R0E5;P52907;C9JUG7;F8W9N7;A0A0D9SET8;Q53GE2;Q53GC7;A4D0V4;P47755 A8K0T9 98 103 CAPZA1;CAPZA2 F-actin-capping protein subunit alpha-1;F-actin-capping protein subunit alpha-2 yes no 2 0.022771 79.833 1 0.73868 0.95436 NaN 1 Median 0.73868 0.95436 NaN 1 0 Median NaN NaN NaN 0 0 Median 11515000 6879200 4636000 11515000 6879200 4636000 0 0 0 820 14 885 1317 2129 2129 1 FDSNEEDSASVFSPSFGLK SFPSYSQKSEDDSAKFDSNEEDSASVFSPS EEDSASVFSPSFGLKQTDKVPSKTVAAKKG K F D L K Q 1 0 1 2 0 0 2 1 0 0 1 1 0 3 1 5 0 0 0 1 0 0 19 0 2061.9167 Q02880;Q71UH4;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q02880 1464 1482 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 2 6.0826E-08 62.765 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 821 796 886 1318 2130;2131 2130 1272;1273 0 FEEESKEPVADEEEEDSDDDVEPITEFR SDCLGEHLYVMVNAKFEEESKEPVADEEEE EEDSDDDVEPITEFRFVPSDKSALEAMFTA K F E F R F 1 1 0 5 0 0 10 0 0 1 0 1 0 2 2 2 1 0 0 2 0 0 28 1 3313.3794 E9PJF4;P54105 E9PJF4 86 113 CLNS1A Methylosome subunit pICln yes no 3 1.2268E-09 43.099 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 822 620 887 1319 2132 2132 945 0 FEMEQNLR DIDNTRMTLDDFRIKFEMEQNLRQGVDADI LDDFRIKFEMEQNLRQGVDADINGLRQVLD K F E L R Q 0 1 1 0 0 1 2 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 8 0 1065.4913 CON__P35527;P35527;K7EQQ3 CON__P35527 243 250 KRT9 Keratin, type I cytoskeletal 9 yes no 2 0.00010021 75.109 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2517300 2517300 0 0 0 0 2517300 2517300 0 + 823 582 888 1320 2133 2133 118 1 FESPEVAER IKMENGKSKGCGVVKFESPEVAERACRMMN GCGVVKFESPEVAERACRMMNGMKLSGREI K F E E R A 1 1 0 0 0 0 3 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 9 0 1062.4982 A0A087X0X3;P52272;Q8TCM5;Q6P2D7;Q7KYM9;Q59ES8 A0A087X0X3 699 707 HNRNPM;DKFZp547H118;HNRPM;ORF Heterogeneous nuclear ribonucleoprotein M yes no 2 0.003761 51.979 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 824 205 889 1321;1322 2134;2135 2135 287 0 FFPGHESR TVEIYNLSANYFQEKFFPGHESRATEALCW ANYFQEKFFPGHESRATEALCWAEGQRLFS K F F S R A 0 1 0 0 0 0 1 1 1 0 0 0 0 2 1 1 0 0 0 0 0 0 8 0 975.45626 H3BSH7;Q969X6;H3BPD7;I3L4T9 H3BSH7 68 75 CIRH1A Cirhin yes no 3 0.024695 28.081 1 0.61539 0.79005 NaN 1 Median NaN NaN NaN 0 0 Median 0.61539 0.79005 NaN 1 0 Median 18519000 10931000 7588100 0 0 0 18519000 10931000 7588100 825 667 890 1323 2136 2136 1 FFSPELK RLCRNAAVCPYCSLRFFSPELK________ VCPYCSLRFFSPELK_______________ R F F L K - 0 0 0 0 0 0 1 0 0 0 1 1 0 2 1 1 0 0 0 0 0 0 7 0 866.4538 Q5H9S0;B4DTN6;Q9ULJ3 Q5H9S0 757 763 DKFZp781N1974;ZBTB21 Zinc finger and BTB domain-containing protein 21 yes no 2 0.017671 51.066 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 826 499 891 1324 2137;2138 2137 734 0 FFTPSPDGR KFNKKTKGLIDGLTKFFTPSPDGRKARGEV IDGLTKFFTPSPDGRKARGEVVDYSEQYRI K F F G R K 0 1 0 1 0 0 0 1 0 0 0 0 0 2 2 1 1 0 0 0 0 0 9 0 1022.4821 A5PKX7;Q92794;A5PLL3;B2RWN8;Q8WYB5 A5PKX7 416 424 MYST3;KAT6A;MYST4;KAT6B Histone acetyltransferase;Histone acetyltransferase KAT6A;Histone acetyltransferase KAT6B no no 2 0.00094959 62.466 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 827 321;421 892 1325;1326 2139;2140;2141;2142 2140 488;618;1843;1875 0 FFTPSPDGRK KFNKKTKGLIDGLTKFFTPSPDGRKARGEV DGLTKFFTPSPDGRKARGEVVDYSEQYRIR K F F R K A 0 1 0 1 0 0 0 1 0 0 0 1 0 2 2 1 1 0 0 0 0 0 10 1 1150.5771 A5PKX7;Q92794;A5PLL3 A5PKX7 416 425 MYST3;KAT6A Histone acetyltransferase;Histone acetyltransferase KAT6A yes no 2 2.1969E-06 97.734 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 828 321 893 1327;1328 2143;2144;2145;2146 2144 488;1843 0 FFTPSPDGRR KVNKKTKGLIDGLTKFFTPSPDGRRSRGEI DGLTKFFTPSPDGRRSRGEIIDFSKHYRPR K F F R R S 0 2 0 1 0 0 0 1 0 0 0 0 0 2 2 1 1 0 0 0 0 0 10 1 1178.5833 B2RWN8;Q8WYB5 B2RWN8 441 450 MYST4;KAT6B Histone acetyltransferase;Histone acetyltransferase KAT6B yes no 2 0.0010216 53.237 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 829 421 894 1329 2147 2147 618;1875 0 FFTTPSK GKKDARQTPKKPEAKFFTTPSKSVRKASHT TPKKPEAKFFTTPSKSVRKASHTPKKWPKK K F F S K S 0 0 0 0 0 0 0 0 0 0 0 1 0 2 1 1 2 0 0 0 0 0 7 0 826.4225 O76021 O76021 462 468 RSL1D1 Ribosomal L1 domain-containing protein 1 yes yes 2 0.023698 81.297 1 0.34296 0.4262 NaN 1 Median NaN NaN NaN 0 0 Median 0.34296 0.4262 NaN 1 0 Median 29935000 22007000 7928300 0 0 0 29935000 22007000 7928300 830 712 895 1330 2148;2149 2148 2 FGEYNSNMSPEEK EYKERDKSNVFRDKRFGEYNSNMSPEEKMM KRFGEYNSNMSPEEKMMKRFALEQQRHHEK R F G E K M 0 0 2 0 0 0 3 1 0 0 0 1 1 1 1 2 0 0 1 0 0 0 13 0 1530.6297 E9PFK5;A8KA74;P78316 E9PFK5 88 100 NOP14 Nucleolar protein 14 yes no 2 3.5918E-06 94.532 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 831 382 896 1331 2150 2150 77 584 0 FGNQEDAHEFLR VSFIRDLKKIARHFRFGNQEDAHEFLRYTI HFRFGNQEDAHEFLRYTIDAMQKACLNGCA R F G L R Y 1 1 1 1 0 1 2 1 1 0 1 0 0 2 0 0 0 0 0 0 0 0 12 0 1461.6637 A0A075B784;A0A024R8V6;Q9P275;Q9H9C5;E9PEW0;K7ELR5;Q8IXW9 A0A075B784 203 214 USP36;DUB1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 yes no 3 0.023879 22.493 1 1.2314 1.6539 NaN 1 Median NaN NaN NaN 0 0 Median 1.2314 1.6539 NaN 1 0 Median 8198800 3182100 5016800 0 0 0 8198800 3182100 5016800 832 107 897 1332 2151 2151 1 FHHTIGGSR TSAGRKSRGLGKGHKFHHTIGGSRRAAWRR LGKGHKFHHTIGGSRRAAWRRRNTLQLHRY K F H S R R 0 1 0 0 0 0 0 2 2 1 0 0 0 1 0 1 1 0 0 0 0 0 9 0 1010.5046 A0A024R2Q4;P61313;B4DLP4 A0A024R2Q4 180 188 RPL15 Ribosomal protein L15;60S ribosomal protein L15 yes no 3 0.00019887 61.56 1 0.73645 0.90054 NaN 1 Median 0.73645 0.90054 NaN 1 0 Median NaN NaN NaN 0 0 Median 108780000 62411000 46367000 108780000 62411000 46367000 0 0 0 833 50 898 1333 2152;2153;2154 2153 3 FITDNTVEER RAHRIGQTKTVRVFRFITDNTVEERIVERA VRVFRFITDNTVEERIVERAEMKLRLDSIV R F I E R I 0 1 1 1 0 0 2 0 0 1 0 0 0 1 0 0 2 0 0 1 0 0 10 0 1222.583 B7ZAX9;B4DZC0;O60264;Q4W5H1 B7ZAX9 550 559 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes no 2 0.00011322 72.607 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 5978700 0 5978700 0 0 0 5978700 0 5978700 834 510 899 1334 2155 2155 1 FKDEQIDILVATDVAAR HGNLSQTQRLEALRRFKDEQIDILVATDVA DEQIDILVATDVAARGLDIEGVKTVINFTM R F K A R G 3 1 0 3 0 1 1 0 0 2 1 1 0 1 0 0 1 0 0 2 0 0 17 1 1903.0051 B7Z6D5;B3GQE6;Q96GQ7;Q53G15 B7Z6D5 478 494 DDX27 Probable ATP-dependent RNA helicase DDX27 yes no 3 2.2671E-05 50.178 1 0.62078 0.92925 NaN 1 Median NaN NaN NaN 0 0 Median 0.62078 0.92925 NaN 1 0 Median 24829000 14884000 9945200 0 0 0 24829000 14884000 9945200 835 423 900 1335 2156 2156 1 FLDGIYVSEK LIQQATTVKNKDIRKFLDGIYVSEKGTVQQ KDIRKFLDGIYVSEKGTVQQADE_______ K F L E K G 0 0 0 1 0 0 1 1 0 1 1 1 0 1 0 1 0 0 1 1 0 0 10 0 1169.5968 H0Y9R4;D6RAN4;H0Y9V9;Q53Z07;Q2NKY6;P32969 H0Y9R4 74 83 RPL9 60S ribosomal protein L9 yes no 2 0.0092861 61.65 1 0.70098 0.90256 NaN 1 Median NaN NaN NaN 0 0 Median 0.70098 0.90256 NaN 1 0 Median 11396000 6391600 5004900 0 0 0 11396000 6391600 5004900 836 597 901 1336 2157 2157 1 FLEQQNK KTLNNKFASFIDKVRFLEQQNKVLDTKWAL ASFIDKVRFLEQQNKVLDTKWALLQEQGTK R F L N K V 0 0 1 0 0 2 1 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 7 0 905.46068 V9HWE1;P08670;Q53HU8;B0YJC4;A0A1B0GTT5;A0A1B0GUA0;CON__Q9DCV7;CON__Q9NSB2;CON__Q6ISB0;Q9NSB2;U3KPR1;B4DIR1;K7ELP4;K7EJU1;K7EKH9;B4E192;B4DJW0;A0JNT2;CON__Q61726;A0A087X106;CON__O43790;B4DN72;A8K872;CON__Q6NT21;CON__P78385;CON__Q14533;CON__P78386;Q8IWY7;P14136;O43790;P78385;Q14533;P78386;CON__P05787;P05787;F8VUG2;F8W1U3;CON__H-INV:HIT000292931;CON__Q8VED5;CON__P13647;P13647;B4E1T1;B4DRR0;B4DRU6;CON__P48668;CON__P04259;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;F8W0C6;B4DWU6;B4DKV4;CON__Q5XKE5;CON__O95678;Q5XKE5;O95678;CON__Q8N1N4-2;CON__Q7RTT2;CON__P07744;Q8N1N4;CON__Q5XQN5;CON__Q922U2;CON__P50446;CON__Q8BGZ7;CON__P08729;B3KY79;CON__Q3KNV1;P08729 CON__Q5XQN5 189 195 HEL113;VIM;KRT84;KRT86;GFAP;KRT83;KRT81;KRT85;KRT8;KRT5;KRT6C;KRT6A;KRT79;KRT75;KRT78;KRT7 Vimentin;Keratin, type II cuticular Hb4;Glial fibrillary acidic protein;Keratin, type II cuticular Hb6;Keratin, type II cuticular Hb3;Keratin, type II cuticular Hb1;Keratin, type II cuticular Hb5;Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 79;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 78;Keratin, type II cytoskeletal 7 no no 2 0.028594 71.378 1 0.74122 0.97718 NaN 1 Median NaN NaN NaN 0 0 Median 0.74122 0.97718 NaN 1 0 Median 6238300 3475900 2762400 0 0 0 6238300 3475900 2762400 + 837 584;731;580;575;576 902 1337 2158;2159 2159 2 FLEQSMDIEDLK EYVPPKPKPSRVKEKFLEQSMDIEDLKYCS KEKFLEQSMDIEDLKYCSEHSVNEHEDGDG K F L L K Y 0 0 0 2 0 1 2 0 0 1 2 1 1 1 0 1 0 0 0 0 0 0 12 0 1466.6963 Q59HG1;O95239;B3KNC0;B4DYE2;Q2VIQ3 Q59HG1 1037 1048 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B yes no 2 0.0026926 62.891 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 838 717 903 1338 2160;2161 2161 151 1085 0 FLESLPEEEQQR KCDQKKKDYEVELLRFLESLPEEEQQRVLG LLRFLESLPEEEQQRVLGEEKMLNINKKQA R F L Q R V 0 1 0 0 0 2 4 0 0 0 2 0 0 1 1 1 0 0 0 0 0 0 12 0 1503.7205 B4DNQ1;E9PKP7;A8K962;P17480;O00164;B4DLB0 B4DNQ1 258 269 UBTF Nucleolar transcription factor 1 yes no 2 0.0035208 47.062 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 839 376 904 1339 2162 2162 572 0 FLESPSR KTCDTMVFNHPAIKKFLESPSRSSSPANQR FNHPAIKKFLESPSRSSSPANQRAETPSAN K F L S R S 0 1 0 0 0 0 1 0 0 0 1 0 0 1 1 2 0 0 0 0 0 0 7 0 834.42357 Q9ULM3;Q9H8R0 Q9ULM3 115 121 YEATS2 YEATS domain-containing protein 2 yes no 2 0.015364 55.064 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 840 957 905 1340 2163 2163 1716 0 FLETDSEEEQEEVNEK QSHFGTDDRFRMDSRFLETDSEEEQEEVNE LETDSEEEQEEVNEKKTAEEEELAEEKKKA R F L E K K 0 0 1 1 0 1 7 0 0 0 1 1 0 1 0 1 1 0 0 1 0 0 16 0 1953.8327 A6H8Z4;A0A024R250;Q76FK4;B4DM91;F8WE42;Q6AI50;F5H101 A6H8Z4 817 832 NOL8;DKFZp686P12242 Nucleolar protein 8 yes no 2 1.7007E-19 111.63 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 841 42 906;907 1341;1342;1343;1344 2164;2165;2166;2167;2168;2169;2170;2171 2169 42;1779 0 FLETDSEEEQEEVNEKK QSHFGTDDRFRMDSRFLETDSEEEQEEVNE ETDSEEEQEEVNEKKTAEEEELAEEKKKAL R F L K K T 0 0 1 1 0 1 7 0 0 0 1 2 0 1 0 1 1 0 0 1 0 0 17 1 2081.9277 A6H8Z4;A0A024R250;Q76FK4;B4DM91;F8WE42;Q6AI50;F5H101 A6H8Z4 817 833 NOL8;DKFZp686P12242 Nucleolar protein 8 yes no 2;3 1.9588E-61 140.2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 842 42 908 1345;1346 2172;2173 2173 42;1779 0 FLKIESSEEDSK ANGYKSHTPAPSKTKFLKIESSEEDSKSHD KTKFLKIESSEEDSKSHDSDHACNRTAGPS K F L S K S 0 0 0 1 0 0 3 0 0 1 1 2 0 1 0 3 0 0 0 0 0 0 12 1 1410.6878 Q9NSI6 Q9NSI6 1750 1761 BRWD1 Bromodomain and WD repeat-containing protein 1 yes yes 2 0.00019022 66.989 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 843 938 909 1347 2174;2175 2175 1656;1657 0 FLLGPPQGGSPR HRLAPWQASPPHPCRFLLGPPQGGSPRGSH PCRFLLGPPQGGSPRGSHHTSGSSLSTPRS R F L P R G 0 1 0 0 0 1 0 3 0 0 2 0 0 1 3 1 0 0 0 0 0 0 12 0 1224.6615 Q8IY92 Q8IY92 1035 1046 SLX4 Structure-specific endonuclease subunit SLX4 yes yes 2 0.00014913 82.362 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 844 876 910 1348;1349 2176;2177;2178;2179 2177 1468 0 FLNAEGSGGIVGHDEISR KRQKTATKGNQRVQKFLNAEGSGGIVGHDE AEGSGGIVGHDEISRCSLSEPLESDEADLA K F L S R C 1 1 1 1 0 0 2 4 1 2 1 0 0 1 0 2 0 0 0 1 0 0 18 0 1856.9017 Q03188;H0Y8J2 Q03188 594 611 CENPC Centromere protein C yes no 3 2.5873E-06 46.982 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 845 799 911 1350 2180;2181 2181 1304 0 FLPAVSDENSK RKARKQKGAETELVRFLPAVSDENSKRLSS ELVRFLPAVSDENSKRLSSRARKRAAKRRL R F L S K R 1 0 1 1 0 0 1 0 0 0 1 1 0 1 1 2 0 0 0 1 0 0 11 0 1205.5928 P46087;F5H5X6;F5GWB7;F5H709;F5H359;F5H8G6 P46087 31 41 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes no 2 0.029198 43.991 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 846 763 912 1351 2182 2182 1229 0 FLYDDNQR LARLLFPPKDDHTLKFLYDDNQRVEPEWYI KDDHTLKFLYDDNQRVEPEWYIPIIPMVLI K F L Q R V 0 1 1 2 0 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 8 0 1069.4829 P11388;Q02880;Q71UH4;Q59H80;B4DKD0;E9PCY5;Q6W6M6 P11388 828 835 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2-beta;DNA topoisomerase 2 no no 2 0.022514 51.854 1 0.79324 1.0981 NaN 1 Median NaN NaN NaN 0 0 Median 0.79324 1.0981 NaN 1 0 Median 59823000 32845000 26978000 0 0 0 59823000 32845000 26978000 847 734;796 913 1352 2183 2183 1 FNADEFEDMVAEK GRQKIHISKKWGFTKFNADEFEDMVAEKRL TKFNADEFEDMVAEKRLIPDGCGVKYIPSR K F N E K R 2 0 1 2 0 0 3 0 0 0 0 1 1 2 0 0 0 0 0 1 0 0 13 0 1543.6501 F8W7C6;A0A087WV22;X1WI28;X5D2T3;P27635;X5D7P1 F8W7C6 125 137 RPL10 60S ribosomal protein L10 yes no 2 0.0078622 55.776 1 0.4778 0.61399 NaN 1 Median NaN NaN NaN 0 0 Median 0.4778 0.61399 NaN 1 0 Median 11282000 7019500 4262100 0 0 0 11282000 7019500 4262100 848 187 914 1353 2184 2184 42 1 FNISTDRR DTKSKVTLLEGDHVRFNISTDRRDKLERAT LEGDHVRFNISTDRRDKLERATNIEVLSNT R F N R R D 0 2 1 1 0 0 0 0 0 1 0 0 0 1 0 1 1 0 0 0 0 0 8 1 1007.5148 E9PLT0;Q96L66;Q9GZV0;A0A024R0K2;A0A024R0E2;O75534 E9PLT0 188 195 CSDE1;UNR Cold shock domain-containing protein E1 yes no 2 0.026826 38.419 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 849 13 915 1354 2185 2185 1 FPGQLNADLRK HLVSATMSGVTTCLRFPGQLNADLRKLAVN TCLRFPGQLNADLRKLAVNMVPFPRLHFFM R F P R K L 1 1 1 1 0 1 0 1 0 0 2 1 0 1 1 0 0 0 0 0 0 0 11 1 1257.683 B4DJ43;Q8N6N5;Q8IZ29;Q8IWP6;P04350;P68371;M0R2D3;Q1KSF8;Q96HX0;Q96B85;B4DXZ5;B4E386;Q9UGA2;K7ESM5;Q9BUU9;O43209;B4E052;B7Z4N1;Q5ST81;B7ZAK1;B4DQN9;A0A024QZU2;B3KS31;B3KML9;A0A075B736;B4DE77;Q5SQY0;B4DP54;B2R6L0;Q3ZCM7;A6NNZ2;Q9BVA1;Q13885;Q9BUF5;A1L196;A1L195;G3V2A3;A5D907;A5D906;Q3ZCR3;Q9BV28;A0A183YE00;Q2NKY5;Q53G92;B2RBD5;CON__ENSEMBL:ENSBTAP00000025008;A0A0B4J269;Q13509;Q9H4B7;B4DMU8;B7ZAF0;Q5JP53;Q6LC01;Q5SU16;B4DY90;P07437 B4DJ43 160 170 TUBB2C;TUBB4A;TUBB4B;XTP3TPATP1;TUBB;DKFZp566F223;TUBB6;TUBB2B;TUBB8;TUBB2A;TUBB3;TUBB1 Tubulin beta-4A chain;Tubulin beta-4B chain;Tubulin beta-8 chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-6 chain;Tubulin beta-3 chain;Tubulin beta-1 chain;Tubulin beta chain no no 3 0.021738 29.303 2 3.4921 4.5795 NaN 1 Median NaN NaN NaN 0 0 Median 3.4921 4.5795 NaN 1 0 Median 13711000 1830100 11881000 0 0 0 13711000 1830100 11881000 850 469;484 916 1355;1356 2186;2187 2186 1 FPHSAHQK AMPFKCMQLTDFILKFPHSAHQKYVRQAWQ LTDFILKFPHSAHQKYVRQAWQKADINTKW K F P Q K Y 1 0 0 0 0 1 0 0 2 0 0 1 0 1 1 1 0 0 0 0 0 0 8 0 950.47225 A8K7N0;Q6IPH7;P50914;E7EPB3;A0PJ62;B7Z6S8;A8K3Q9 A8K7N0 64 71 RPL14 60S ribosomal protein L14 yes no 2 0.0025643 89.123 1 0.7501 0.88837 NaN 1 Median 0.7501 0.88837 NaN 1 0 Median NaN NaN NaN 0 0 Median 7452900 4349200 3103700 7452900 4349200 3103700 0 0 0 851 370 917 1357 2188;2189 2188 2 FPLTTESAMK SAPRRNKLDHYAIIKFPLTTESAMKKIEDN YAIIKFPLTTESAMKKIEDNNTLVFIVDVK K F P M K K 1 0 0 0 0 0 1 0 0 0 1 1 1 1 1 1 2 0 0 0 0 0 10 0 1123.5583 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750 H7BY10 81 90 RPL23A 60S ribosomal protein L23a yes no 2 0.0012244 80.834 2 0.44995 0.59301 NaN 1 Median NaN NaN NaN 0 0 Median 0.44995 0.59301 NaN 1 0 Median 14782000 9706900 5074600 0 0 0 14782000 9706900 5074600 852 385 918;919 1358;1359 2190;2191;2192 2192 78 586 2 FQETEFLSPPR PLDVENIQKRIDQSKFQETEFLSPPRKVPR DQSKFQETEFLSPPRKVPRLSEKSVEERDS K F Q P R K 0 1 0 0 0 1 2 0 0 0 1 0 0 2 2 1 1 0 0 0 0 0 11 0 1349.6616 P42166 P42166 417 427 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 2 0.00032789 72.496 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 853 757 920 1360 2193 2193 1186 0 FQIQDISVETEDNK NHRLTLGLIWTIILRFQIQDISVETEDNKE RFQIQDISVETEDNKEKKSAKDALLLWCQM R F Q N K E 0 0 1 2 0 2 2 0 0 2 0 1 0 1 0 1 1 0 0 1 0 0 14 0 1664.7893 D6W5C0;K9MS24;B2ZZ89;A0A087WUZ3;Q01082;F8W6C1;A4QPE4;O15020 D6W5C0 71 84 SPTBN1;SPTBN2 Spectrin beta chain, non-erythrocytic 1;Spectrin beta chain, non-erythrocytic 2 yes no 2 5.0354E-32 126.48 2 0.85124 1.0151 NaN 1 Median 0.85124 1.0151 NaN 1 0 Median NaN NaN NaN 0 0 Median 9311000 5471200 3839800 9311000 5471200 3839800 0 0 0 854 185 921;922 1361;1362 2194;2195;2196;2197 2197 263 2 FQSEEQQQTEDELQDK SSEESITRINKKIEKFQSEEQQQTEDELQD QSEEQQQTEDELQDKIHPFAQTQSLVYPFP K F Q D K I 0 0 0 2 0 5 4 0 0 0 1 1 0 1 0 1 1 0 0 0 0 0 16 0 1980.8549 CON__P02666 CON__P02666 33 48 yes yes 2 0 243.9 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 + 855 574 923 1363 2198;2199;2200 2200 854 0 FREDHPDLIQNAK DFQREKQEFERNLARFREDHPDLIQNAKKS ARFREDHPDLIQNAKKSDIPEKPKTPQQLW R F R A K K 1 1 1 2 0 1 1 0 1 1 1 1 0 1 1 0 0 0 0 0 0 0 13 1 1581.79 B4DNQ1;E9PKP7;A8K962;P17480;O00164;Q05BZ1 B4DNQ1 113 125 UBTF Nucleolar transcription factor 1 yes no 3 0.021988 25.448 1 0.82743 1.0752 NaN 1 Median 0.82743 1.0752 NaN 1 0 Median NaN NaN NaN 0 0 Median 15151000 9140800 6009700 15151000 9140800 6009700 0 0 0 856 376 924 1364 2201 2201 1 FRPAGAAPRPPPK NRSREARKDRTPPPRFRPAGAAPRPPPKPM PRFRPAGAAPRPPPKPM_____________ R F R P K P 3 2 0 0 0 0 0 1 0 0 0 1 0 1 5 0 0 0 0 0 0 0 13 2 1360.7728 A0A024RB14;P62854;Q5JNZ5 A0A024RB14 101 113 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 yes no 3 0.00024312 65.234 1 0.47755 0.64788 NaN 1 Median NaN NaN NaN 0 0 Median 0.47755 0.64788 NaN 1 0 Median 24823000 17466000 7357000 0 0 0 24823000 17466000 7357000 857 136 925 1365 2202;2203 2203 2 FRPAGAAPRPPPKPM NRSREARKDRTPPPRFRPAGAAPRPPPKPM FRPAGAAPRPPPKPM_______________ R F R P M - 3 2 0 0 0 0 0 1 0 0 0 1 1 1 6 0 0 0 0 0 0 0 15 3 1588.866 A0A024RB14;P62854;Q5JNZ5 A0A024RB14 101 115 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 yes no 3 8.8051E-05 60.401 1 0.35936 0.52332 NaN 1 Median NaN NaN NaN 0 0 Median 0.35936 0.52332 NaN 1 0 Median 144660000 111260000 33409000 0 0 0 144660000 111260000 33409000 858 136 926 1366 2204;2205 2205 29 2 FSFYGNLSPR LMLPDSPLVEEGRRKFSFYGNLSPRRSLYR EGRRKFSFYGNLSPRRSLYRTLSDESICSN K F S P R R 0 1 1 0 0 0 0 1 0 0 1 0 0 2 1 2 0 0 1 0 0 0 10 0 1186.5771 A7E2F9;Q9P2F8 A7E2F9 1247 1256 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 yes no 2 0.0003699 75.819 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 859 333 927 1367 2206;2207;2208;2209 2207 507 0 FSGEEGEIEDDESGTENREEK MFRKSSTSPKWAHDKFSGEEGEIEDDESGT EIEDDESGTENREEKDNIQPTTE_______ K F S E K D 0 1 1 2 0 0 8 3 0 1 0 1 0 1 0 2 1 0 0 0 0 0 21 1 2384.9728 Q9Y2W1 Q9Y2W1 927 947 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3 1.1328E-09 47.7 1 1 0.8576 1.1892 NaN 1 Median NaN NaN NaN 0 0 Median 0.8576 1.1892 NaN 1 0 Median 13754000 6778300 6976000 0 0 0 13754000 6778300 6976000 860 963 928;929 1368;1369 2210;2211;2212 2210 1742 2 FSLLKPWA FIENGSEFAQKLLKKFSLLKPWA_______ AQKLLKKFSLLKPWA_______________ K F S W A - 1 0 0 0 0 0 0 0 0 0 2 1 0 1 1 1 0 1 0 0 0 0 8 1 960.54329 F8W0V3;Q9GZZ8 F8W0V3 120 127 LACRT Extracellular glycoprotein lacritin yes no 2 0.0045918 68.485 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 15809000 15809000 0 15809000 15809000 0 0 0 0 861 637 930 1370 2213;2214 2214 2 FSPELTVR SCADCGNSGHPSCLKFSPELTVRVKALRWQ GHPSCLKFSPELTVRVKALRWQCIECKTCS K F S V R V 0 1 0 0 0 0 1 0 0 0 1 0 0 1 1 1 1 0 0 1 0 0 8 0 947.50763 A5PKX7;Q92794;A5PLL3 A5PKX7 244 251 MYST3;KAT6A Histone acetyltransferase;Histone acetyltransferase KAT6A yes no 2 0.011198 45.598 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 862 321 931 1371 2215 2215 489 0 FSPVLGR IAHIPLYFVNAQFPRFSPVLGRAQEPPAGG FVNAQFPRFSPVLGRAQEPPAGGGGSIHDL R F S G R A 0 1 0 0 0 0 0 1 0 0 1 0 0 1 1 1 0 0 0 1 0 0 7 0 774.43882 F8VZ44;B4DDU7;Q53HS1;Q9NRG9 F8VZ44 370 376 AAAS Aladin yes no 2 0.019534 47.574 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 863 457 932 1372 2216 2216 669 0 FSSCGGGGGSFGAGGGFGSR TTSSSTRRSGGGGGRFSSCGGGGGSFGAGG GGGGSFGAGGGFGSRSLVNLGGSKSISISV R F S S R S 1 1 0 0 1 0 0 10 0 0 0 0 0 3 0 4 0 0 0 0 0 0 20 0 1764.7274 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;H6VRG2;CON__P04264 H6VRG3 46 65 KRT1 Keratin, type II cytoskeletal 1 yes no 2 0.0026536 43.408 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 5020600 5020600 0 0 0 0 5020600 5020600 0 + 864 670 933 1373 2217 2217 1 FSSSIENSDSPVR TKPPLDHNASATDYKFSSSIENSDSPVRSI YKFSSSIENSDSPVRSILKSQAWQPLVEGS K F S V R S 0 1 1 1 0 0 1 0 0 1 0 0 0 1 1 5 0 0 0 1 0 0 13 0 1423.6579 O95425 O95425 911 923 SVIL Supervillin yes yes 2 2.8365E-192 191.06 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 865 719 934 1374;1375 2218;2219;2220;2221 2219 1098;1099 0 FSSSSGYGGGSSR YSRFSSSGGRGGGGRFSSSSGYGGGSSRVC GRFSSSSGYGGGSSRVCGRGGGGSFGYSYG R F S S R V 0 1 0 0 0 0 0 4 0 0 0 0 0 1 0 6 0 0 1 0 0 0 13 0 1234.5214 CON__P35527;P35527 CON__P35527 47 59 KRT9 Keratin, type I cytoskeletal 9 yes no 2 0.0025155 45.915 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 5646400 5646400 0 0 0 0 5646400 5646400 0 + 866 582 935 1376 2222 2222 1 FSVCVLGDQQHCDEAK RFSGTVRLKSTPRPKFSVCVLGDQQHCDEA SVCVLGDQQHCDEAKAVDIPHMDIEALKKL K F S A K A 1 0 0 2 2 2 1 1 1 0 1 1 0 1 0 1 0 0 0 2 0 0 16 0 1891.8193 Q1JQ76;P62906 Q1JQ76 52 67 RPL10A Ribosomal protein;60S ribosomal protein L10a yes no 3 1.0035E-09 82.59 1 1 0.59148 0.74254 45.469 2 Median 0.84863 1.0241 NaN 1 0 Median 0.41226 0.53838 NaN 1 0 Median 47835000 26688000 21147000 41182000 22731000 18451000 6653400 3957300 2696100 867 790 936 1377;1378 2223;2224;2225 2224 3 FTLRDEGK TICLETFKDFPQMGRFTLRDEGKTIAIGKV DFPQMGRFTLRDEGKTIAIGKVLKLVPEKD R F T G K T 0 1 0 1 0 0 1 1 0 0 1 1 0 1 0 0 1 0 0 0 0 0 8 1 964.49779 H3BR35;Q7KZX8;B2RCT6;A8K2W7;P15170;B4DQM6;Q8IYD1 H3BR35 453 460 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B yes no 2 4.0231E-12 108.74 1 5.5719 7.3172 NaN 1 Median NaN NaN NaN 0 0 Median 5.5719 7.3172 NaN 1 0 Median 7871700 1444400 6427300 0 0 0 7871700 1444400 6427300 868 346 937 1379 2226 2226 1 FTMDLDSDEDFSDFDEK PPRETEPRRAATKTKFTMDLDSDEDFSDFD MDLDSDEDFSDFDEKTDDEDFVPSDASPPK K F T E K T 0 0 0 6 0 0 2 0 0 0 1 1 1 3 0 2 1 0 0 0 0 0 17 0 2054.7939 P11388 P11388 1326 1342 TOP2A DNA topoisomerase 2-alpha yes yes 2 0.0049121 41.48 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 869 734 938 1380 2227 2227 1139 0 FTPSEAHSR RFDMHKRSPLLRAPRFTPSEAHSRIFESVT LLRAPRFTPSEAHSRIFESVTLPSNRTSAG R F T S R I 1 1 0 0 0 0 1 0 1 0 0 0 0 1 1 2 1 0 0 0 0 0 9 0 1030.4832 Q03164;E9PR05 Q03164 702 710 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes no 2 0.019799 46.39 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3042900 3042900 0 0 0 0 3042900 3042900 0 870 798 939 1381 2228 2228 1 FTQLDLEDVQVR KLNKITKFIEENKEKFTQLDLEDVQVREKL KEKFTQLDLEDVQVREKLKHATSKAKKLEK K F T V R E 0 1 0 2 0 2 1 0 0 0 2 0 0 1 0 0 1 0 0 2 0 0 12 0 1461.7464 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83 Q9NTJ3 390 401 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 2 2.5375E-05 95.483 1 0.8372 1.0732 NaN 1 Median NaN NaN NaN 0 0 Median 0.8372 1.0732 NaN 1 0 Median 18048000 9244800 8803000 0 0 0 18048000 9244800 8803000 871 941 940 1382 2229;2230 2230 2 FTQQNYHDR YQIHRIRHFYMRKVKFTQQNYHDRLSQILT YMRKVKFTQQNYHDRLSQILTDFPKLDDIH K F T D R L 0 1 1 1 0 2 0 0 1 0 0 0 0 1 0 0 1 0 1 0 0 0 9 0 1207.537 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;O60747;Q5T3R7 Q8N4P8 51 59 GTPBP4 Nucleolar GTP-binding protein 1 yes no 2;3 0.013398 61.679 2 0.58161 0.78195 NaN 1 Median NaN NaN NaN 0 0 Median 0.58161 0.78195 NaN 1 0 Median 32840000 20369000 12470000 0 0 0 32840000 20369000 12470000 872 585 941 1383;1384 2231;2232 2231 2 FTQTSGETTDADKEPAGEDK RVQKVQVKEEPSAVKFTQTSGETTDADKEP GETTDADKEPAGEDKGIKALKESAKQTPAP K F T D K G 2 0 0 3 0 1 3 2 0 0 0 2 0 1 1 1 4 0 0 0 0 0 20 1 2125.9288 P46013 P46013 2742 2761 MKI67 Antigen KI-67 yes yes 3 8.6429E-17 88.071 1 1.0125 1.204 NaN 1 Median NaN NaN NaN 0 0 Median 1.0125 1.204 NaN 1 0 Median 116030000 57732000 58297000 0 0 0 116030000 57732000 58297000 873 762 942 1385 2233;2234 2234 2 FTSPADLDASGAGPGPK VGAHKECLEVIPPCKFTSPADLDASGAGPG SPADLDASGAGPGPKMVAMQNYHGNPAPPG K F T P K M 3 0 0 2 0 0 0 3 0 0 1 1 0 1 3 2 1 0 0 0 0 0 17 0 1586.7577 P52735 P52735 574 590 VAV2 Guanine nucleotide exchange factor VAV2 yes yes 2 4.1949E-05 52.071 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 874 775 943 1386 2235 2235 1988 0 FTVETASR RNGYGAKLCNIFSTKFTVETASREYKKMFK CNIFSTKFTVETASREYKKMFKQTWMDNMG K F T S R E 1 1 0 0 0 0 1 0 0 0 0 0 0 1 0 1 2 0 0 1 0 0 8 0 909.4556 P11388 P11388 177 184 TOP2A DNA topoisomerase 2-alpha yes yes 2 0.0064774 80.229 1 0.75884 1.032 NaN 1 Median NaN NaN NaN 0 0 Median 0.75884 1.032 NaN 1 0 Median 37110000 20353000 16757000 0 0 0 37110000 20353000 16757000 875 734 944 1387 2236;2237 2237 2 FVDEGSLYGLSIATSR EVYVWDVNSRKCLNRFVDEGSLYGLSIATS VDEGSLYGLSIATSRNGQYVACGSNCGVVN R F V S R N 1 1 0 1 0 0 1 2 0 1 2 0 0 1 0 3 1 0 1 1 0 0 16 0 1713.8574 Q9Y5J1;B2RAX6;J3QR85;J3KSR7;J3QRG0;J3QLD6 Q9Y5J1 420 435 UTP18 U3 small nucleolar RNA-associated protein 18 homolog yes no 2 0.001309 45.257 1 0.77008 1.0271 NaN 1 Median NaN NaN NaN 0 0 Median 0.77008 1.0271 NaN 1 0 Median 7061100 3446600 3614600 0 0 0 7061100 3446600 3614600 876 968 945 1388 2238;2239 2238 2 FVEVGR ______________________________ ______________________________ R F V G R V 0 1 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 2 0 0 6 0 705.38097 A8K7N0;Q6IPH7;P50914;E7EPB3;A0PJ62;B7Z6S8;A8K3Q9 A8K7N0 6 11 RPL14 60S ribosomal protein L14 yes no 2 0.0024653 69.093 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2596800 2596800 0 0 0 0 2596800 2596800 0 877 370 946 1389 2240 2240 1 FVQETELSQR LVRRNVELFIATSQKFVQETELSQRIRDWE ATSQKFVQETELSQRIRDWEDTVQPLLQEQ K F V Q R I 0 1 0 0 0 2 2 0 0 0 1 0 0 1 0 1 1 0 0 1 0 0 10 0 1235.6146 A0A0A6YYG7;Q6IBW4;H0YC55 A0A0A6YYG7 485 494 NCAPH2 Condensin-2 complex subunit H2 yes no 2 1.3941E-08 101.71 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1910100 1910100 0 0 0 0 1910100 1910100 0 878 230 947;948 1390;1391 2241;2242;2243 2241 329 1 FVVIHDR ETDHLFDLSRRFDLRFVVIHDRYDHQQFKK LSRRFDLRFVVIHDRYDHQQFKKRSVEDLK R F V D R Y 0 1 0 1 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 2 0 0 7 0 884.48684 B4DQG8;Q9NPF5;Q5TG38;Q5TG39;Q5TG40 B4DQG8 161 167 DMAP1 DNA methyltransferase 1-associated protein 1 yes no 2 0.011889 52.636 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1118200 1118200 0 0 0 0 1118200 1118200 0 879 490 949 1392 2244 2244 1 FYEEVHDLER ALKNLQVKCAQIEAKFYEEVHDLERKYAVL QIEAKFYEEVHDLERKYAVLYQPLFDKRFE K F Y E R K 0 1 0 1 0 0 3 0 1 0 1 0 0 1 0 0 0 0 1 1 0 0 10 0 1335.6095 F8VRJ2;F8W118;F8VY35;F8VV59;A0A024RBE6;F5H4R6;H0YIV4;A0A024RBB7;P55209;B7Z5H0;H0YH88;H0YHC3;F8W020;F8VXI6;F8VUX1;F8W543;B7Z9C2;F8W0J6;B7Z2V4;A8MXH2;F8VVB5;E9PNW0;E9PJJ2;E9PS34;E9PNJ7;E9PKT8;C9J6D1;C9JZI7;A0A024RCC9;B7ZAK9;B7ZB83;B7ZAC7;B4DS05;Q99733 F8VRJ2 54 63 NAP1L1;NAP1L4 Nucleosome assembly protein 1-like 1;Nucleosome assembly protein 1-like 4 no no 2 0.010066 52.549 1 0.43404 0.588 NaN 1 Median NaN NaN NaN 0 0 Median 0.43404 0.588 NaN 1 0 Median 35605000 24315000 11290000 0 0 0 35605000 24315000 11290000 880 139;156 950 1393 2245 2245 1 FYEEVHDLERK ALKNLQVKCAQIEAKFYEEVHDLERKYAVL IEAKFYEEVHDLERKYAVLYQPLFDKRFEI K F Y R K Y 0 1 0 1 0 0 3 0 1 0 1 1 0 1 0 0 0 0 1 1 0 0 11 1 1463.7045 F8VRJ2;F8W118;F8VY35;F8VV59;A0A024RBE6;F5H4R6;H0YIV4;A0A024RBB7;P55209;B7Z5H0;H0YH88;H0YHC3;F8W020;F8VXI6;F8VUX1;F8W543;B7Z9C2;F8W0J6;B7Z2V4;A8MXH2;F8VVB5;E9PNW0;E9PJJ2;E9PS34;E9PNJ7;E9PKT8;C9J6D1;C9JZI7;A0A024RCC9;B7ZAK9;B7ZB83;B7ZAC7;B4DS05;Q99733 F8VRJ2 54 64 NAP1L1;NAP1L4 Nucleosome assembly protein 1-like 1;Nucleosome assembly protein 1-like 4 no no 3 0.00098254 51.286 1 1 0.57512 0.79426 27.926 2 Median 0.74322 0.96765 NaN 1 0 Median 0.44504 0.65193 NaN 1 0 Median 59546000 36446000 23100000 39496000 23355000 16141000 20050000 13091000 6958800 881 139;156 951 1394;1395 2246;2247;2248;2249;2250 2248 5 GAASTLVPGVSETSASPGSPSVR VVEEKELVRRRRQQRGAASTLVPGVSETSA GVSETSASPGSPSVRSMSGPESSPPIGGPC R G A V R S 3 1 0 0 0 0 1 3 0 0 1 0 0 0 3 6 2 0 0 3 0 0 23 0 2113.0651 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2 A0A0A0MS59 2513 2535 SRCAP Helicase SRCAP yes no 2 1.7134E-10 53.754 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 882 219 952 1396 2251 2251 304;305;306;307;1816 0 GAEAFGDSEEDGEDVFEVEK EGVGVVGEDNDAAARGAEAFGDSEEDGEDV GDSEEDGEDVFEVEKILDMKTEGGKVLYKV R G A E K I 2 0 0 3 0 0 6 3 0 0 0 1 0 2 0 1 0 0 0 2 0 0 20 0 2157.8862 Q99549;B3KS10 Q99549 44 63 MPHOSPH8 M-phase phosphoprotein 8 yes no 2 5.4896E-145 169.43 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 883 913 953 1397;1398 2252;2253;2254;2255 2253 1573 0 GAEHITTYTFNTHK NRHFIVPASRFKLLKGAEHITTYTFNTHKA KGAEHITTYTFNTHKAQHTFCKRCGVQSFY K G A H K A 1 0 1 0 0 0 1 1 2 1 0 1 0 1 0 0 4 0 1 0 0 0 14 0 1618.774 Q7Z7K6 Q7Z7K6 197 210 CENPV Centromere protein V yes yes 3 3.174E-05 75.102 1 1 0.87319 1.0846 49.095 2 Median 1.2543 1.5348 NaN 1 0 Median 0.60788 0.76651 NaN 1 0 Median 49297000 24982000 24315000 29650000 12608000 17042000 19647000 12374000 7272800 884 871 954 1399;1400 2256;2257;2258 2257 3 GAFGKPQGTVAR MLSCAGADRLQTGMRGAFGKPQGTVARVHI GMRGAFGKPQGTVARVHIGQVIMSIRTKLQ R G A A R V 2 1 0 0 0 1 0 3 0 0 0 1 0 1 1 0 1 0 0 1 0 0 12 1 1187.6411 F8W7C6;A0A087WV22;X1WI28;X5D2T3;P27635;H7C123;H7C2C5;Q96L21 F8W7C6 66 77 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like yes no 3 0.00079715 51.463 1 0.55441 0.86483 NaN 1 Median NaN NaN NaN 0 0 Median 0.55441 0.86483 NaN 1 0 Median 67412000 43068000 24344000 0 0 0 67412000 43068000 24344000 885 187 955 1401 2259 2259 1 GAGDGSDEEVDGKADGAEAKPAE RGDLPFVVPRRMARKGAGDGSDEEVDGKAD EVDGKADGAEAKPAE_______________ K G A A E - 5 0 0 4 0 0 4 5 0 0 0 2 0 0 1 1 0 0 0 1 0 0 23 2 2173.9247 A0A024R1N1;A0A0U4BW16;P35579;Q6ZNL4 A0A024R1N1 1938 1960 MYH9;FLJ00279 Myosin-9 yes no 2;3 0 254.4 3 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 886 32 956 1402;1403;1404;1405;1406;1407 2260;2261;2262;2263;2264;2265;2266;2267;2268;2269;2270 2260 30 0 GAGGSPVGVEEGLVNVGTGQK NPLSPSLSDKDRGLKGAGGSPVGVEEGLVN VGVEEGLVNVGTGQKLPTSGADPLCRNPTN K G A Q K L 1 0 1 0 0 1 2 7 0 0 1 1 0 0 1 1 1 0 0 4 0 0 21 0 1910.9698 Q7Z5J4 Q7Z5J4 1370 1390 RAI1 Retinoic acid-induced protein 1 yes yes 2 9.9182E-125 163.53 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 887 870 957 1408;1409 2271;2272;2273;2274 2272 1452 0 GAPAAATAPAPTAHK FKLNRKKLEGGGERRGAPAAATAPAPTAHK GAPAAATAPAPTAHKAKKAAPGAAGSRRAD R G A H K A 7 0 0 0 0 0 0 1 1 0 0 1 0 0 3 0 2 0 0 0 0 0 15 0 1330.6993 Q92522 Q92522 129 143 H1FX Histone H1x yes yes 2;3 7.1926E-26 119.03 2 0.59667 0.74578 5.1048 2 Median NaN NaN NaN 0 0 Median 0.59667 0.74578 5.1048 2 0 Median 76010000 48421000 27589000 0 0 0 76010000 48421000 27589000 888 898 958 1410;1411 2275;2276;2277 2276 3 GASGSFVVVQK KRELNRGVIKQVKGKGASGSFVVVQKSRKT VKGKGASGSFVVVQKSRKTPQKSRNRKNRS K G A Q K S 1 0 0 0 0 1 0 2 0 0 0 1 0 1 0 2 0 0 0 3 0 0 11 0 1077.5819 Q5SSJ5;X6RGJ2;Q5SWC8 Q5SSJ5 223 233 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 2 0.0051228 64.711 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3406600 3406600 0 0 0 0 3406600 3406600 0 889 842 959 1412 2278 2278 1 GASGTFQLK QRAVERGQLEQITGKGASGTFQLKKSGEKP EQITGKGASGTFQLKKSGEKPLLGGSLMEY K G A L K K 1 0 0 0 0 1 0 2 0 0 1 1 0 1 0 1 1 0 0 0 0 0 9 0 907.47633 Q5SSJ5;B0QZK4 Q5SSJ5 321 329 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 2 0.005373 62.107 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 5284900 5284900 0 0 0 0 5284900 5284900 0 890 842 960 1413 2279 2279 1 GCGVVKFESPEVAER HVLYADIKMENGKSKGCGVVKFESPEVAER GCGVVKFESPEVAERACRMMNGMKLSGREI K G C E R A 1 1 0 0 1 0 3 2 0 0 0 1 0 1 1 1 0 0 0 3 0 0 15 1 1662.8036 A0A087X0X3;P52272;Q8TCM5;Q6P2D7;Q7KYM9;Q59ES8 A0A087X0X3 693 707 HNRNPM;DKFZp547H118;HNRPM;ORF Heterogeneous nuclear ribonucleoprotein M yes no 2;3 0.00019982 54.805 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 891 205 961 1414;1415 2280;2281;2282 2280 287 0 GCIVDANLSVLNLVIVK YRPRRTGERKRKSVRGCIVDANLSVLNLVI IVDANLSVLNLVIVKKGEKDIPGLTDTTVP R G C V K K 1 0 2 1 1 0 0 1 0 2 3 1 0 0 0 1 0 0 0 4 0 0 17 0 1826.0336 Q96DV6;A2A3R6;P62753;A2A3R5;Q9BZU1 Q96DV6 99 115 RPS6 40S ribosomal protein S6 yes no 2 0.0072562 37.681 1 1 0.9217 1.1278 NaN 1 Median 0.9217 1.1278 NaN 1 0 Median NaN NaN NaN 0 0 Median 8050600 3058700 4991900 5628600 3058700 2570000 2421900 0 2421900 892 303 962 1416;1417 2283;2284 2283 1 GDDLQAIKK SKSGQRGSSKSGKLKGDDLQAIKKELTQIK KSGKLKGDDLQAIKKELTQIKQKVDSLLEN K G D K K E 1 0 0 2 0 1 0 1 0 1 1 2 0 0 0 0 0 0 0 0 0 0 9 1 986.53966 G3V576;G3V4W0;B4DY08;B2R5W2;G3V4C1;B2R603;G3V2Q1;A8K9A4;P07910;B3KX96;G3V5V7;B4DQQ2;G3V2D6 G3V576 190 198 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 2 0.0192 45.68 1 0.73165 0.89204 NaN 1 Median NaN NaN NaN 0 0 Median 0.73165 0.89204 NaN 1 0 Median 8041600 4335800 3705800 0 0 0 8041600 4335800 3705800 893 378 963 1418 2285 2285 1 GDEELDSLIK KVKRITPRHLQLAIRGDEELDSLIKATIAG QLAIRGDEELDSLIKATIAGGGVIPHIHKS R G D I K A 0 0 0 2 0 0 2 1 0 1 2 1 0 0 0 1 0 0 0 0 0 0 10 0 1117.5503 Q71UI9;P0C0S5;C9J0D1;C9J386 Q71UI9 93 102 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z;Histone H2A yes no 1;2 0.0095572 59.153 2 0.64805 0.80802 7.9428 2 Median NaN NaN NaN 0 0 Median 0.64805 0.80802 7.9428 2 0 Median 44490000 27243000 17247000 0 0 0 44490000 27243000 17247000 894 732 964 1419;1420 2286;2287 2286 2 GDFSYIGNLMTK LSYIQSIPVVNEEHRGDFSYIGNLMTKEFI EHRGDFSYIGNLMTKEFIGQQLILIIKSLD R G D T K E 0 0 1 1 0 0 0 2 0 1 1 1 1 1 0 1 1 0 1 0 0 0 12 0 1344.6384 Q6NUR1;Q9BPX3 Q6NUR1 387 398 NCAPG Condensin complex subunit 3 yes no 2 0.0062027 49.298 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 895 857 965 1421;1422 2288;2289;2290 2288 201 1416 0 GDKVDILYNNIK SLEAHVNGFRFTSVRGDKVDILYNNIKHAL SVRGDKVDILYNNIKHALFQPCDGEMIIVL R G D I K H 0 0 2 2 0 0 0 1 0 2 1 2 0 0 0 0 0 0 1 1 0 0 12 1 1390.7456 Q9Y5B9 Q9Y5B9 694 705 SUPT16H FACT complex subunit SPT16 yes yes 2 6.0675E-05 92.866 1 0.7373 0.91432 NaN 1 Median NaN NaN NaN 0 0 Median 0.7373 0.91432 NaN 1 0 Median 10796000 5877300 4918600 0 0 0 10796000 5877300 4918600 896 967 966 1423 2291 2291 1 GDQVLNFSDAEDLIDDSK QYYLLEDQTVQPLPKGDQVLNFSDAEDLID VLNFSDAEDLIDDSKLKDMRDEVLEHELMV K G D S K L 1 0 1 5 0 1 1 1 0 1 2 1 0 1 0 2 0 0 0 1 0 0 18 0 1979.896 A0A024R134;F8W126;Q96EZ8 A0A024R134 84 101 MCRS1 Microspherule protein 1 yes no 2 1.4035E-07 62.203 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 897 24 967 1424 2292;2293 2293 22 0 GDSIEEILADSEDEEDNEEEERSR EEEEEEEEEEPAQGKGDSIEEILADSEDEE DSEDEEDNEEEERSRGKEQRKLARQRSRAW K G D S R G 1 2 1 4 0 0 9 1 0 2 1 0 0 0 0 3 0 0 0 0 0 0 24 1 2794.1537 B3KMR5;Q5JTH9;B3KPQ2;B3KY97 B3KMR5 1070 1093 RRP12 RRP12-like protein yes no 3 1.6995E-27 95.823 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 898 430 968 1425 2294 2294 635 0 GEAAAERPGEAAVASSPSK ______________________________ AERPGEAAVASSPSKANGQENGHVKVNGDA K G E S K A 6 1 0 0 0 0 3 2 0 0 0 1 0 0 2 3 0 0 0 1 0 0 19 1 1783.8701 Q05C82;Q6NVI1;P29966 Q05C82 12 30 MARCKS Myristoylated alanine-rich C-kinase substrate yes no 3 5.7079E-06 44.683 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 899 752 969 1426 2295 2295 1171;1172 0 GEAVLRPGLDAEPELSPEEQR ______________________________ PGLDAEPELSPEEQRVLERKLKKERKKEER K G E Q R V 2 2 0 1 0 1 5 2 0 0 3 0 0 0 3 1 0 0 0 1 0 0 21 1 2291.1394 A0A024R836;C9JQV0;Q9BRJ6 A0A024R836 7 27 MGC11257;C7orf50 Uncharacterized protein C7orf50 yes no 3 4.8131E-10 52.707 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 900 100 970 1427 2296;2297 2297 140 0 GEGDAPFSEPGTTSTQRPSSPETATK TALAGRSPSPASGRRGEGDAPFSEPGTTST TTSTQRPSSPETATKQPSSPYEDKDKDKKE R G E T K Q 2 1 0 1 0 1 3 3 0 0 0 1 0 1 4 4 5 0 0 0 0 0 26 1 2634.2045 A0A140VK53;Q9UQ35;I3L4D8;I3L182;Q9UQ39;I3L1I8;A0A087X1W1 A0A140VK53 304 329 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 3 2.1456E-09 46.048 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 901 284 971 1428 2298 2298 399;400 0 GELGMSPPGSK NKCGLGLDLKVRTQKGELGMSPPGSKIPKA RTQKGELGMSPPGSKIPKAPSGGAVEQKVG K G E S K I 0 0 0 0 0 0 1 3 0 0 1 1 1 0 2 2 0 0 0 0 0 0 11 0 1058.5066 Q14781 Q14781 297 307 CBX2 Chromobox protein homolog 2 yes yes 2 0.0058978 52.5 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 902 818 972 1429 2299;2300 2300 194 1349 0 GEPNVSYICSR VLKLCDFGSAKQLVRGEPNVSYICSRYYRA QLVRGEPNVSYICSRYYRAPELIFGATDYT R G E S R Y 0 1 1 0 1 0 1 1 0 1 0 0 0 0 1 2 0 0 1 1 0 0 11 0 1280.5819 Q68D16;A8MT37;Q6FI27;B5BUC0;A0A024R0L5;P49841;P49840 Q68D16 178 188 DKFZp686D0638;GSK3A;GSK3B Glycogen synthase kinase-3 beta;Glycogen synthase kinase-3 alpha yes no 2 0.00019188 74.841 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 903 20 973 1430 2301;2302;2303 2303 2065 0 GEQVSQNGLPAEQGSPR VSEEAESQQQWDTSKGEQVSQNGLPAEQGS QVSQNGLPAEQGSPRMAETVDTSEMVNGAT K G E P R M 1 1 1 0 0 3 2 3 0 0 1 0 0 0 2 2 0 0 0 1 0 0 17 0 1752.8391 D6W5C0;K9MS24;B2ZZ89;A0A087WUZ3;Q01082;B4DIF8;Q8WYB3 D6W5C0 2038 2054 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 2 4.2797E-75 144.68 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 904 185 974 1431 2304;2305 2305 264 0 GEQYVVIIQNK KNIKQNAHIVEWSPRGEQYVVIIQNKIDIY WSPRGEQYVVIIQNKIDIYQLDTASISGTI R G E N K I 0 0 1 0 0 2 1 1 0 2 0 1 0 0 0 0 0 0 1 2 0 0 11 0 1289.698 A0A0S2Z5C3;Q9NWT1 A0A0S2Z5C3 176 186 PAK1IP1 p21-activated protein kinase-interacting protein 1 yes no 2 6.0054E-08 100.25 1 1 0.88447 1.0941 14.552 2 Median 1.0221 1.2127 NaN 1 0 Median 0.76536 0.9871 NaN 1 0 Median 25015000 12654000 12361000 7971700 4058800 3912900 17044000 8595100 8448600 905 270 975 1432;1433 2306;2307 2306 2 GESDDFHMDFDSAVAPR FEKIVSKAVTSKKSKGESDDFHMDFDSAVA SDDFHMDFDSAVAPRAKSVRAKKPIKYLEE K G E P R A 2 1 0 4 0 0 1 1 1 0 0 0 1 2 1 2 0 0 0 1 0 0 17 0 1894.7792 P11388 P11388 1493 1509 TOP2A DNA topoisomerase 2-alpha yes yes 2;3 8.102E-15 101.96 2 0.69614 0.95222 NaN 1 Median NaN NaN NaN 0 0 Median 0.69614 0.95222 NaN 1 0 Median 41881000 24086000 17795000 0 0 0 41881000 24086000 17795000 906 734 976;977 1434;1435 2308;2309;2310 2309 160 1140 2 GESDGAYIHR GEEPDIAVPKFKQRKGESDGAYIHRMQQEA FKQRKGESDGAYIHRMQQEAQHVLFLSKNQ K G E H R M 1 1 0 1 0 0 1 2 1 1 0 0 0 0 0 1 0 0 1 0 0 0 10 0 1103.4996 I3L0U5;H6QX63;Q6PK04 I3L0U5 128 137 CCDC137 Coiled-coil domain-containing protein 137 yes no 2 0.0075544 53.775 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3547500 3547500 0 0 0 0 3547500 3547500 0 907 669 978 1436 2311 2311 1 GESLDNLDSPR SVNKEPVSLPGIMRRGESLDNLDSPRSNSW IMRRGESLDNLDSPRSNSWRQPPWLNQPTG R G E P R S 0 1 1 2 0 0 1 1 0 0 2 0 0 0 1 2 0 0 0 0 0 0 11 0 1201.5575 E9PMS6;B7Z8W3;A0A1P7ZIM8;A0A0A0MTE2;E9PMT2;F8WD26;F8J2B5;J3KP06;Q8WWI1 E9PMS6 1100 1110 LMO7 LIM domain only protein 7 yes no 2 1.1E-98 159.08 3 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 908 227 979 1437;1438;1439;1440 2312;2313;2314;2315 2312 318 0 GEVVETVEDVIVR LLETTETPKRKRGEKGEVVETVEDVIVRKL EKGEVVETVEDVIVRKLTAERVEELKKVIK K G E V R K 0 1 0 1 0 0 3 1 0 1 0 0 0 0 0 0 1 0 0 5 0 0 13 0 1442.7617 H7C128;H7C179;H7C127;B2R5V7;A8K1N6;B4DEG9;B4DN43;B5MCW3;Q9H0E9 H7C128 80 92 BRD8 Bromodomain-containing protein 8 yes no 2 0.00016474 69.01 1 1.5798 2.1202 NaN 1 Median NaN NaN NaN 0 0 Median 1.5798 2.1202 NaN 1 0 Median 8534900 3995500 4539400 0 0 0 8534900 3995500 4539400 909 341 980 1441 2316 2316 1 GFAFVQYVNER IFSKYGKIVGCSVHKGFAFVQYVNERNARA SVHKGFAFVQYVNERNARAAVAGEDGRMIA K G F E R N 1 1 1 0 0 1 1 1 0 0 0 0 0 2 0 0 0 0 1 2 0 0 11 0 1328.6513 G3V576;G3V4W0;B4DY08;B2R5W2;G3V4C1;B2R603;G3V2Q1;A8K9A4;P07910;B3KX96;G3V4M8;G3V5X6;G3V3K6;G3V251;B4DMJ1;B4DSU6;G3V555;G3V575 G3V576 51 61 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 2 0.0028635 80.688 1 0.75105 0.98318 NaN 1 Median NaN NaN NaN 0 0 Median 0.75105 0.98318 NaN 1 0 Median 5398400 3005700 2392700 0 0 0 5398400 3005700 2392700 910 378 981 1442 2317;2318 2318 2 GFAFVTFESPADAK ______________________________ RGFAFVTFESPADAKDAARDMNGKSLDGKA R G F A K D 3 0 0 1 0 0 1 1 0 0 0 1 0 3 1 1 1 0 0 1 0 0 14 0 1485.714 B4E352;P38159;H0Y6E7;H3BT71;Q2VIN3;Q96E39;H3BR27;A0A1B0GUK8;A8K8A6;O75526;Q8N7X1 B4E352 11 24 RBMX;RBMXL1;RBMXL2;RBMXL3 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1;RNA-binding motif protein, X-linked-like-2;RNA-binding motif protein, X-linked-like-3 yes no 2 1.8416E-10 102.5 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 911 522 982 1443;1444 2319;2320;2321;2322;2323 2319 757 0 GFGEYSRSPTF KMSSPETDEEIEKMKGFGEYSRSPTF____ EKMKGFGEYSRSPTF_______________ K G F T F - 0 1 0 0 0 0 1 2 0 0 0 0 0 2 1 2 1 0 1 0 0 0 11 1 1246.5619 D6REL5;Q6UWZ7 D6REL5 350 360 FAM175A BRCA1-A complex subunit Abraxas yes no 2 1.6299E-07 100.55 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 912 599 983 1445 2324;2325;2326 2326 893 0 GFGFVCFSSPEEATK TITSAKVMMEGGRSKGFGFVCFSSPEEATK GFGFVCFSSPEEATKAVTEMNGRIVATKPL K G F T K A 1 0 0 0 1 0 2 2 0 0 0 1 0 3 1 2 1 0 0 1 0 0 15 0 1661.7396 A0A024R9E2;A0A087WTT1;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;B3KT93;A0A024R9C1;P11940;H0YAR2;B1ANR0;Q6IQ30;Q13310;H0YB86;Q15164;H0YEU6;Q147Y3;Q3B867;Q59GZ7;Q53GL4;H0Y5F5;Q2VIP3;Q5VX58;Q3ZCS4;Q4VXU2;Q9H361 A0A024R9E2 334 348 PABPC1;PABPC4;PABPC3;PABPC1L Polyadenylate-binding protein;Polyadenylate-binding protein 1;Polyadenylate-binding protein 4;Polyadenylate-binding protein 1-like;Polyadenylate-binding protein 3 yes no 2 2.3017E-07 69.716 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 913 113 984 1446 2327 2327 165;166 0 GFGFVDFNSEEDAK VRARIVTDRETGSSKGFGFVDFNSEEDAKA KGFGFVDFNSEEDAKAAKEAMEDGEIDGNK K G F A K A 1 0 1 2 0 0 2 2 0 0 0 1 0 3 0 1 0 0 0 1 0 0 14 0 1560.6733 H7BY16;Q9BQ02;B3KM80;Q6ZS99;A0A024R4A0;P19338;B3KTP9 H7BY16 236 249 NCL Nucleolin yes no 2 0.0019546 48.704 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 914 61 985 1447 2328 2328 67 0 GFQQISFVNSIATSK QVNHRWEVCLTMSEKGFQQISFVNSIATSK GFQQISFVNSIATSKGGRHVDYVADQIVTK K G F S K G 1 0 1 0 0 2 0 1 0 2 0 1 0 2 0 3 1 0 0 1 0 0 15 0 1625.8413 P11388 P11388 307 321 TOP2A DNA topoisomerase 2-alpha yes yes 2 2.0322E-06 71.558 1 1 1.1308 1.4206 47.744 2 Median 0.80942 1.0136 NaN 1 0 Median 1.5799 1.9911 NaN 1 0 Median 80197000 35049000 45148000 4209400 2679400 1530000 75987000 32370000 43618000 915 734 986 1448;1449 2329;2330;2331 2331 3 GFSEEHNTWEPEK RRVVKGQVEYLLKWKGFSEEHNTWEPEKNL WKGFSEEHNTWEPEKNLDCPELISEFMKKY K G F E K N 0 0 1 0 0 0 4 1 1 0 0 1 0 1 1 1 1 1 0 0 0 0 13 0 1588.6794 V9HWG0;P45973;Q6I9T7;F8VNY3 V9HWG0 43 55 HEL25;CBX5 Chromobox protein homolog 5 yes no 3 5.5287E-07 96.734 1 0.23205 0.2914 NaN 1 Median NaN NaN NaN 0 0 Median 0.23205 0.2914 NaN 1 0 Median 46352000 38431000 7922000 0 0 0 46352000 38431000 7922000 916 761 987 1450 2332;2333 2332 2 GFSLLATEDK EELGFRPEYSASQLKGFSLLATEDKEALKK ASQLKGFSLLATEDKEALKKQLPGVKSEGK K G F D K E 1 0 0 1 0 0 1 1 0 0 2 1 0 1 0 1 1 0 0 0 0 0 10 0 1079.5499 A0A024R3T8;P09874;B2R5W3;B4E0E1;Q05D33;Q6PJL0;Q96P95 A0A024R3T8 183 192 PARP1 Poly [ADP-ribose] polymerase 1 yes no 2 0.0078255 48.568 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 917 56 988 1451 2334 2334 1783 0 GFSQYGVSGSPTK KSISYSCSAVPHQGRGFSQYGVSGSPTKSK GRGFSQYGVSGSPTKSKVTSCPGCRKPLPR R G F T K S 0 0 0 0 0 1 0 3 0 0 0 1 0 1 1 3 1 0 1 1 0 0 13 0 1313.6252 B4DGE7;A0A024RA24;Q9NXC5 B4DGE7 757 769 FLJ20323;MIOS WD repeat-containing protein mio yes no 2 0.00040154 65.092 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 918 124 989 1452 2335 2335 178 0 GGAAVDPDSGLEHSAHVLEK EGINKSEKRMKLTLKGGAAVDPDSGLEHSA DPDSGLEHSAHVLEKGGKVFSATLGLVDIV K G G E K G 3 0 0 2 0 0 2 3 2 0 2 1 0 0 1 2 0 0 0 2 0 0 20 0 1987.9599 A0A024R3T8;P09874;B2R5W3;B4E0E1 A0A024R3T8 529 548 PARP1 Poly [ADP-ribose] polymerase 1 yes no 3;4 1.0958E-06 48.477 1 1 0.61957 0.76531 68.456 2 Median 1.0116 1.2418 NaN 1 0 Median 0.37947 0.47164 NaN 1 0 Median 35597000 22511000 13086000 5514200 2270700 3243500 30083000 20241000 9842500 919 56 990 1453;1454 2336;2337;2338;2339 2337 4 GGEFDEFVNDDTDDDLPISK KEKKRGGGGGRRSKKGGEFDEFVNDDTDDD EFVNDDTDDDLPISKKKKRRKGSGSEQEGE K G G S K K 0 0 1 6 0 0 2 2 0 1 1 1 0 2 1 1 1 0 0 1 0 0 20 0 2226.9441 A8K6X9;Q6PD62 A8K6X9 914 933 CTR9 RNA polymerase-associated protein CTR9 homolog yes no 2 1.8294E-10 63.998 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 920 366 991 1455;1456 2340;2341 2341 1857 0 GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR SVSTSHTTISGGGSRGGGGGGYGSGGSSYG GGGSYGSGGGGGGGRGSYGSGGSSYGSGGG R G G G R G 0 1 0 0 0 0 0 21 0 0 0 0 0 0 0 6 0 0 3 0 0 0 31 0 2382.9446 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;H6VRG2;H6VRF9;CON__P04264 H6VRG3 519 549 KRT1 Keratin, type II cytoskeletal 1 yes no 2 2.2061E-06 44.641 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 51277000 51277000 0 0 0 0 51277000 51277000 0 + 921 670 992 1457 2342 2342 1 GGGHVAQIYAIR GKERFAGVDIRVRVKGGGHVAQIYAIRQSI RVKGGGHVAQIYAIRQSISKALVAYYQKYV K G G I R Q 2 1 0 0 0 1 0 3 1 2 0 0 0 0 0 0 0 0 1 1 0 0 12 0 1240.6677 M0R210;P62249;M0QX76;M0R1M5;M0R3H0 M0R210 57 68 RPS16 40S ribosomal protein S16 yes no 3 0.010489 37.18 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3940700 3940700 0 0 0 0 3940700 3940700 0 922 693 993 1458 2343 2343 1 GGLGYVEETSEFEAR FLRSDLIEVATRLQKGGLGYVEETSEFEAR GGLGYVEETSEFEARVISLEKLKDFGECVI K G G A R V 1 1 0 0 0 0 4 3 0 0 1 0 0 1 0 1 1 0 1 1 0 0 15 0 1642.7475 Q9UIG0 Q9UIG0 1069 1083 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 2 3.0718E-25 95.018 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 16741000 0 16741000 0 0 0 16741000 0 16741000 923 952 994 1459 2344 2344 1 GGLLTSEEDSGFSTSPK CHENHDKKLNRCAIKGGLLTSEEDSGFSTS LLTSEEDSGFSTSPKDNSLPKKKRQKTEKK K G G P K D 0 0 0 1 0 0 2 3 0 0 2 1 0 1 1 4 2 0 0 0 0 0 17 0 1710.7948 Q8IWK7;Q4FD37;Q8TDH4;B2RAI2;Q9UQR1 Q8IWK7 292 308 ZNF148 Zinc finger protein 148 yes no 2 5.0731E-11 97.214 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 924 411 995 1460 2345;2346;2347 2345 605;1871 0 GGNLPPVSPNDSGAK LHEKLNTIIIKASAKGGNLPPVSPNDSGAK GGNLPPVSPNDSGAKIASNPLERHVIPVSS K G G A K I 1 0 2 1 0 0 0 3 0 0 1 1 0 0 3 2 0 0 0 1 0 0 15 0 1408.6947 Q9UK61;A0A024R363;A0A087X0F1 Q9UK61 1096 1110 FAM208A;C3orf63 Protein FAM208A yes no 2 0.00013679 60.657 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 925 954 996 1461 2348;2349 2349 1709 0 GGNRFEPYANPTK RPAQNEKRKEKNIKRGGNRFEPYANPTKRY KRGGNRFEPYANPTKRYRAFITNIPFDVKW R G G T K R 1 1 2 0 0 0 1 2 0 0 0 1 0 1 2 0 1 0 1 0 0 0 13 1 1449.7001 A0A087X0X3;P52272;M0R0Y6;M0QYQ7;M0R0N3;M0R019;M0R2T0;B4DEG4 A0A087X0X3 57 69 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 3 0.014257 23.831 1 1.449 1.8425 NaN 1 Median NaN NaN NaN 0 0 Median 1.449 1.8425 NaN 1 0 Median 5447500 2402300 3045100 0 0 0 5447500 2402300 3045100 926 205 997 1462 2350 2350 1 GGPASPGGLQGLETR RRMCLPDSWAMNMYRGGPASPGGLQGLETR GGPASPGGLQGLETRRLSLPSSKAKAKSLS R G G T R R 1 1 0 0 0 1 1 5 0 0 2 0 0 0 2 1 1 0 0 0 0 0 15 0 1395.7106 C9JWC4;Q8NCD3 C9JWC4 384 398 HJURP Holliday junction recognition protein yes no 2 0.00055944 52.823 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 927 565 998 1463 2351 2351 848 0 GGPASVPSSSPGTSVK SPARGPSGSPRTQGRGGPASVPSSSPGTSV GPASVPSSSPGTSVKKPDPNIKNNAASEGV R G G V K K 1 0 0 0 0 0 0 3 0 0 0 1 0 0 3 5 1 0 0 2 0 0 16 0 1413.71 J3KRZ2;J3KRI4;A0A024R6Z0;O43237 J3KRZ2 24 39 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 yes no 2 7.9796E-06 67.115 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 928 86 999 1464 2352 2352 118;119;120 0 GGPGSGGHGPLR SEEPDSTTPPAKSPRGGPGSGGHGPLRYRS SPRGGPGSGGHGPLRYRSSSSTEQSLMMGL R G G L R Y 0 1 0 0 0 0 0 6 1 0 1 0 0 0 2 1 0 0 0 0 0 0 12 0 1047.521 Q8N1G0 Q8N1G0 1102 1113 ZNF687 Zinc finger protein 687 yes yes 2 0.0033241 51.135 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 929 879 1000 1465 2353 2353 1476 0 GGQTVPGQAPLCFDPGSPASDK PMLHDPPKMGMPVVRGGQTVPGQAPLCFDP QAPLCFDPGSPASDKTEGKKKGRPKAENQA R G G D K T 2 0 0 2 1 2 0 4 0 0 1 1 0 1 4 2 1 0 0 1 0 0 22 0 2185.011 Q96KM6 Q96KM6 47 68 ZNF512B Zinc finger protein 512B yes yes 2 2.4247E-07 45.696 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 930 907 1001 1466 2354 2354 1558 0 GGQTVPGQAPLCFDPGSPASDKTEGK PMLHDPPKMGMPVVRGGQTVPGQAPLCFDP CFDPGSPASDKTEGKKKGRPKAENQALRDI R G G G K K 2 0 0 2 1 2 1 5 0 0 1 2 0 1 4 2 2 0 0 1 0 0 26 1 2600.2177 Q96KM6 Q96KM6 47 72 ZNF512B Zinc finger protein 512B yes yes 3 1.4517E-09 46.415 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 931 907 1002 1467 2355 2355 1558 0 GGSDDSSKDPIDVNYEK LDNLLDIEVAYSLLRGGSDDSSKDPIDVNY SDDSSKDPIDVNYEKLKTDIKVVDRDSEEA R G G E K L 0 0 1 4 0 0 1 2 0 1 0 2 0 0 1 3 0 0 1 1 0 0 17 1 1824.8014 A0A024R3T8;P09874;B2R5W3;B4E0E1 A0A024R3T8 780 796 PARP1 Poly [ADP-ribose] polymerase 1 yes no 2;3 3.9373E-74 144.5 2 2 0.40137 0.4814 NaN 1 Median NaN NaN NaN 0 0 Median 0.40137 0.4814 NaN 1 0 Median 68781000 47618000 21164000 0 0 0 68781000 47618000 21164000 932 56 1003;1004 1468;1469;1470;1471 2356;2357;2358;2359;2360;2361;2362;2363;2364 2358 58;59;60 2 GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK GGGSGGGYGGGSGSRGGSGGSHGGGSGFGG EASGSGGGYGGGSGKSSHS___________ R G G G K S 1 0 0 0 0 0 3 23 1 0 0 1 0 1 0 8 0 0 2 0 0 0 40 0 3222.2743 CON__P35527;P35527;K7EQQ3 CON__P35527 580 619 KRT9 Keratin, type I cytoskeletal 9 yes no 3 0.021199 17.157 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 37366000 37366000 0 0 0 0 37366000 37366000 0 + 933 582 1005 1472 2365 2365 1 GGSISVQVNSIKFDSE SFRHEKTKKKRGSYRGGSISVQVNSIKFDS GSISVQVNSIKFDSE_______________ R G G S E - 0 0 1 1 0 1 1 2 0 2 0 1 0 1 0 4 0 0 0 2 0 0 16 1 1665.821 B2RAU8;A0A0A0MRM9;Q14978;Q96J17 B2RAU8 684 699 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 0 268.93 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 934 214 1006 1473;1474 2366;2367;2368;2369;2370;2371 2368 294 0 GGTSQVGSPTLLSPAVPSK SHHTSGSSLSTPRSRGGTSQVGSPTLLSPA QVGSPTLLSPAVPSKQKRDRSILTLSKEPG R G G S K Q 1 0 0 0 0 1 0 3 0 0 2 1 0 0 3 4 2 0 0 2 0 0 19 0 1781.9523 Q8IY92 Q8IY92 1063 1081 SLX4 Structure-specific endonuclease subunit SLX4 yes yes 2 1.7415E-06 55.314 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 935 876 1007;1008 1475;1476;1477 2372;2373;2374;2375 2373 1469;1470;2017 0 GHAGSVDSIAVDGSGTK WNVERNKVKALHCCRGHAGSVDSIAVDGSG AGSVDSIAVDGSGTKFCSGSWDKMLKIWST R G H T K F 2 0 0 2 0 0 0 4 1 1 0 1 0 0 0 3 1 0 0 2 0 0 17 0 1556.7431 Q53T99;Q9GZL7 Q53T99 187 203 WDR12 Ribosome biogenesis protein WDR12 yes no 3 1.0763E-05 51.888 1 1 0.68421 0.84588 36.857 2 Median 0.90736 1.0977 NaN 1 0 Median 0.51594 0.65181 NaN 1 0 Median 14278000 8586800 5691300 6047800 3647000 2400800 8230200 4939700 3290500 936 838 1009 1478;1479 2376;2377;2378;2379;2380 2377 5 GHAVGDIPGVR IEENDEVLVAGFGRKGHAVGDIPGVRFKVV FGRKGHAVGDIPGVRFKVVKVANVSLLALY K G H V R F 1 1 0 1 0 0 0 3 1 1 0 0 0 0 1 0 0 0 0 2 0 0 11 0 1076.5727 A8K517;P62266;D6RD47 A8K517 109 119 RPS23 40S ribosomal protein S23 yes no 2;3 0.00054705 105.52 2 2 0.75668 1.0123 15.254 4 Median 0.91816 1.1543 0.45294 2 0 Median 0.62386 0.88637 0.67124 2 0 Median 323310000 198370000 124940000 42732000 22691000 20041000 280570000 175680000 104900000 937 358 1010 1480;1481;1482;1483 2381;2382;2383;2384;2385;2386 2386 6 GHCHAPDEQGLEAR RGRAITRGLRATVMRGHCHAPDEQGLEARR RGHCHAPDEQGLEARRQREKLPSLALPEGL R G H A R R 2 1 0 1 1 1 2 2 2 0 1 0 0 0 1 0 0 0 0 0 0 0 14 0 1575.6848 Q4VC44 Q4VC44 171 184 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 yes yes 3 4.0264E-05 77.912 1 0.61732 0.78238 NaN 1 Median 0.61732 0.78238 NaN 1 0 Median NaN NaN NaN 0 0 Median 5852600 3853900 1998700 5852600 3853900 1998700 0 0 0 938 833 1011 1484 2387;2388 2388 2 GHHTYCVRPK KGDAENMVLCDGCDRGHHTYCVRPKLKTVP DGCDRGHHTYCVRPKLKTVPEGDWFCPECR R G H P K L 0 1 0 0 1 0 0 1 2 0 0 1 0 0 1 0 1 0 1 1 0 0 10 1 1253.6088 D3DS96;Q9NRL2;B3KND8;Q59G54 D3DS96 1171 1180 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes no 3 0.0033684 52.49 1 0.4565 0.57783 NaN 1 Median 0.4565 0.57783 NaN 1 0 Median NaN NaN NaN 0 0 Median 5104000 3361200 1742900 5104000 3361200 1742900 0 0 0 939 591 1012 1485 2389 2389 1 GHLENNPALEK VVLMGKNTMMRKAIRGHLENNPALEKLLPH KAIRGHLENNPALEKLLPHIRGNVGFVFTK R G H E K L 1 0 2 0 0 0 2 1 1 0 2 1 0 0 1 0 0 0 0 0 0 0 11 0 1220.6149 F8VWV4;F8VS58;F8VQY6;F8VPE8;F8VRK7;G3V210;F8VW21;F8VZS0;F8VU65;F8VWS0;Q53HW2;Q53HK9;A8K4Z4;A0A024RBS2;P05388;Q6NSF2;Q8NHW5 F8VWV4 53 63 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like yes no 2 2.5168E-29 128.01 2 0.65309 0.80767 NaN 1 Median NaN NaN NaN 0 0 Median 0.65309 0.80767 NaN 1 0 Median 30486000 19853000 10633000 0 0 0 30486000 19853000 10633000 940 149 1013 1486;1487 2390;2391 2390 2 GHLLGR ______________________________ VQVLVLDGRGHLLGRLAAIVAKQVLLGRKV R G H G R L 0 1 0 0 0 0 0 2 1 0 2 0 0 0 0 0 0 0 0 0 0 0 6 0 651.38164 Q9BSQ6;Q5QTS3;Q53H34;M0QYS1;P40429;B4DNC8;M0QZU1;A0A096LPE0 Q9BSQ6 11 16 RPL13A 60S ribosomal protein L13a yes no 2 4.4322E-07 105.82 1 0.67813 0.9691 NaN 1 Median NaN NaN NaN 0 0 Median 0.67813 0.9691 NaN 1 0 Median 154630000 92004000 62626000 0 0 0 154630000 92004000 62626000 941 691 1014 1488 2392 2392 1 GHLSRPEAQSLSPYTTSANR QLEGATRGTTEPHSRGHLSRPEAQSLSPYT PEAQSLSPYTTSANRAKLLAKNRQTFLLQT R G H N R A 2 2 1 0 0 1 1 1 1 0 2 0 0 0 2 4 2 0 1 0 0 0 20 1 2171.0719 A0A024R534;O94776 A0A024R534 424 443 MTA2 Metastasis-associated protein MTA2 yes no 3 3.7087E-145 166.59 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 942 67 1015;1016 1489;1490;1491 2393;2394;2395;2396;2397 2395 80;81 0 GHSCYRPR QGVLTHGRVRLLLSKGHSCYRPRRTGERKR VRLLLSKGHSCYRPRRTGERKRKSVRGCIV K G H P R R 0 2 0 0 1 0 0 1 1 0 0 0 0 0 1 1 0 0 1 0 0 0 8 1 1031.4719 Q96DV6;A2A3R6;P62753;A2A3R5;Q9BZU1;D3DRJ5 Q96DV6 80 87 RPS6 40S ribosomal protein S6 yes no 3 0.0074039 52.716 2 0.90146 1.1787 4.8824 2 Median 0.90146 1.1787 4.8824 2 0 Median NaN NaN NaN 0 0 Median 95910000 50072000 45839000 95910000 50072000 45839000 0 0 0 943 303 1017 1492;1493 2398;2399;2400;2401;2402 2399 5 GHVQPIR MTKKRRNNGRAKKGRGHVQPIRCTNCARCV NGRAKKGRGHVQPIRCTNCARCVPKDKAIK R G H I R C 0 1 0 0 0 1 0 1 1 1 0 0 0 0 1 0 0 0 0 1 0 0 7 0 805.45587 A0A024RB14;P62854;Q5JNZ5;Q75MH1 A0A024RB14 16 22 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 yes no 2 0.001508 94.669 1 0.472 0.68892 NaN 1 Median NaN NaN NaN 0 0 Median 0.472 0.68892 NaN 1 0 Median 290360000 193380000 96983000 0 0 0 290360000 193380000 96983000 944 136 1018 1494 2403;2404;2405 2403 3 GHYAYDCHR RPFDPNDRCYECGEKGHYAYDCHRYSRRRR YECGEKGHYAYDCHRYSRRRRSRSRSRSHS K G H H R Y 1 1 0 1 1 0 0 1 2 0 0 0 0 0 0 0 0 0 2 0 0 0 9 0 1177.4723 Q16629;F8WEA1;Q8NB80;A0A0B4J1Z1;B4DEK2;C9JAB2 Q16629 113 121 SRSF7 Serine/arginine-rich splicing factor 7 yes no 3 0.00038741 67.897 1 0.44322 0.55734 NaN 1 Median 0.44322 0.55734 NaN 1 0 Median NaN NaN NaN 0 0 Median 19213000 14285000 4928600 19213000 14285000 4928600 0 0 0 945 828 1019 1495 2406;2407 2406 2 GIDSDDVQDNSQLK RSGRISSTPTTETIRGIDSDDVQDNSQLKA RGIDSDDVQDNSQLKASTQKAANLSEKHSL R G I L K A 0 0 1 4 0 2 0 1 0 1 1 1 0 0 0 2 0 0 0 1 0 0 14 0 1532.6954 A0A075B754;Q96QE3;H0UIC2 A0A075B754 611 624 ATAD5 ATPase family AAA domain-containing protein 5 yes no 2 4.3097E-05 86.944 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 946 177 1020 1496;1497 2408;2409;2410 2409 237 0 GIFTSPTNSQQLYR PLMQPLAFHSLVMQRGIFTSPTNSQQLYRH RGIFTSPTNSQQLYRHLAAATPVGSSYGDL R G I Y R H 0 1 1 0 0 2 0 1 0 1 1 0 0 1 1 2 2 0 1 0 0 0 14 0 1610.8053 Q14865 Q14865 1129 1142 ARID5B AT-rich interactive domain-containing protein 5B yes yes 2 0.0015819 47.774 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 947 819 1021 1498 2411 2411 1350 0 GIGTPPNTTPIK GAHDAKLRFESQEMKGIGTPPNTTPIKNGS EMKGIGTPPNTTPIKNGSPEIKLKITKTYM K G I I K N 0 0 1 0 0 0 0 2 0 2 0 1 0 0 3 0 3 0 0 0 0 0 12 0 1194.6608 Q05CW4;D6R9V2;D6RIS1;O96028 O96028 107 118 WHSC1 Histone-lysine N-methyltransferase NSD2 no no 2 3.41E-22 101.97 3 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 948 724;800 1022;1023 1499;1500;1501;1502 2412;2413;2414;2415;2416;2417;2418;2419 2418 1952;1953;1954 0 GIPHLVTHDAR KYKLCKVRKIFVGTKGIPHLVTHDARTIRY VGTKGIPHLVTHDARTIRYPDPLIKVNDTI K G I A R T 1 1 0 1 0 0 0 1 2 1 1 0 0 0 1 0 1 0 0 1 0 0 11 0 1214.652 Q96IR1;B2R491;P62701;Q53HV1;C9JEH7;A4FU11;Q496E4;Q8TD47;P22090;Q53HI6 Q96IR1 115 125 RPS4X;RPS4Y1;RPS4Y2 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 yes no 2;3 0.0010104 65.395 1 3 0.57489 0.76299 25.303 3 Median 0.74769 0.9467 NaN 1 0 Median 0.48909 0.66047 20.406 2 0 Median 64659000 45324000 19335000 5247500 2857000 2390500 59412000 42467000 16945000 949 396 1024 1503;1504;1505;1506 2420;2421;2422;2423;2424;2425;2426;2427;2428;2429;2430;2431 2423 12 GIPVVEHK IDPENNLISIWNNGKGIPVVEHKVEKMYVP SIWNNGKGIPVVEHKVEKMYVPALIFGQLL K G I H K V 0 0 0 0 0 0 1 1 1 1 0 1 0 0 1 0 0 0 0 2 0 0 8 0 877.50215 P11388;J3KTB7;Q02880;Q71UH4;B4DKD0;E9PCY5 P11388 124 131 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2-beta;DNA topoisomerase 2 no no 2 0.0064013 79.116 1 1 0.8308 1.0291 4.2067 2 Median 0.87033 1.0602 NaN 1 0 Median 0.79307 0.99896 NaN 1 0 Median 197940000 111240000 86699000 5790100 2792800 2997300 192150000 108450000 83701000 950 734;796 1025 1507;1508 2432;2433;2434 2434 3 GISATLHVTSNPVHAADSPAK LTQDLFGTGGNTTGKGISATLHVTSNPVHA HVTSNPVHAADSPAKASSASAPSSTPTGTT K G I A K A 4 0 1 1 0 0 0 1 2 1 1 1 0 0 2 3 2 0 0 2 0 0 21 0 2072.0651 A0A024R3K9;A0A024R3N2;Q6P4R8 A0A024R3K9 1005 1025 NFRKB Nuclear factor related to kappa-B-binding protein yes no 3 3.9492E-25 105.58 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 951 53 1026 1509;1510 2435;2436;2437 2437 55 0 GISHVIVDEIHER CTVGVLLRKLEAGIRGISHVIVDEIHERDI IRGISHVIVDEIHERDINTDFLLVVLRDVV R G I E R D 0 1 0 1 0 0 2 1 2 3 0 0 0 0 0 1 0 0 0 2 0 0 13 0 1502.7841 Q08211;Q58F26;Q6PJK6 Q08211 504 516 DHX9 ATP-dependent RNA helicase A yes no 3 1.4134E-06 92.939 1 1 0.53811 0.69128 35.111 2 Median 0.68961 0.88609 NaN 1 0 Median 0.4199 0.5393 NaN 1 0 Median 26716000 17899000 8817000 8064400 4808200 3256200 18652000 13091000 5560800 952 802 1027 1511;1512 2438;2439;2440;2441 2441 4 GISPIVFDR TDGSDEKKKERKRARGISPIVFDRSGSSAS ERKRARGISPIVFDRSGSSASESYAGSEKK R G I D R S 0 1 0 1 0 0 0 1 0 2 0 0 0 1 1 1 0 0 0 1 0 0 9 0 1002.5498 J3QR07;Q96MU7 J3QR07 306 314 YTHDC1 YTH domain-containing protein 1 yes no 2 0.00026921 87.184 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 953 684 1028 1513;1514 2442;2443;2444;2445;2446 2446 1017 0 GITINAAHVEYSTAAR KKYEEIDNAPEERARGITINAAHVEYSTAA ITINAAHVEYSTAARHYAHTDCPGHADYVK R G I A R H 4 1 1 0 0 0 1 1 1 2 0 0 0 0 0 1 2 0 1 1 0 0 16 0 1672.8533 P49411 P49411 105 120 TUFM Elongation factor Tu, mitochondrial yes yes 3 0.00017872 46.89 1 1 0.50304 0.63637 NaN 1 Median 0.50304 0.63637 NaN 1 0 Median NaN NaN NaN 0 0 Median 13975000 3424000 10551000 4734600 3424000 1310600 9240600 0 9240600 954 767 1029 1515;1516 2447;2448;2449 2449 3 GIYPHEPK LQLSLADFRRLCILKGIYPHEPKHKKKVNK RRLCILKGIYPHEPKHKKKVNKGSTAARTF K G I P K H 0 0 0 0 0 0 1 1 1 1 0 1 0 0 2 0 0 0 1 0 0 0 8 0 939.48142 B5MCF9;B2RDF2;O00541 B5MCF9 42 49 PES1 Pescadillo homolog yes no 2 0.0087153 55.676 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 8381100 8381100 0 0 0 0 8381100 8381100 0 955 415 1030 1517 2450 2450 1 GKEDALVTK VMVEPHRHEGVFICRGKEDALVTKNLVPGE GVFICRGKEDALVTKNLVPGESVYGEKRVS R G K T K N 1 0 0 1 0 0 1 1 0 0 1 2 0 0 0 0 1 0 0 1 0 0 9 1 959.52876 Q96BS4;P22087;M0QXL5;M0R2Q4;B4DLD4;M0R0P1;M0R299;M0R2U2;M0R1H0;M0R2B0 Q96BS4 40 48 FBL rRNA 2-O-methyltransferase fibrillarin yes no 2 0.0014622 79.489 1 0.47503 0.57183 NaN 1 Median NaN NaN NaN 0 0 Median 0.47503 0.57183 NaN 1 0 Median 55001000 36401000 18600000 0 0 0 55001000 36401000 18600000 956 747 1031 1518 2451 2451 1 GKEETEGFK PIPAAYNRYDQERFKGKEETEGFKIDTMGT DQERFKGKEETEGFKIDTMGTYHGMTLKSV K G K F K I 0 0 0 0 0 0 3 2 0 0 0 2 0 1 0 0 1 0 0 0 0 0 9 1 1023.4873 Q6P1J9;A0A0S2Z5N1;A0A0S2Z5M9 Q6P1J9 300 308 CDC73 Parafibromin yes no 2 0.021057 40.331 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 957 859 1032 1519 2452 2452 1 GKKEELLK ______________________________ IKAPDLRGKKEELLKQLDDLKVELSQLRVA R G K L K Q 0 0 0 0 0 0 2 1 0 0 2 3 0 0 0 0 0 0 0 0 0 0 8 2 943.57023 A4D2M5 A4D2M5 11 18 LOC154880 yes yes 2 0.0027227 66.073 2 0.8139 1.0742 7.2072 2 Median 0.8139 1.0742 7.2072 2 0 Median NaN NaN NaN 0 0 Median 11097000 6147700 4948900 11097000 6147700 4948900 0 0 0 958 314 1033 1520;1521 2453;2454;2455;2456 2456 4 GKLEAIITPPPAK PNIHPELLAKKRGSKGKLEAIITPPPAKKA SKGKLEAIITPPPAKKAKSPSQKKPVSKKA K G K A K K 2 0 0 0 0 0 1 1 0 2 1 2 0 0 3 0 1 0 0 0 0 0 13 1 1333.7969 O75367;D6RCF2 O75367 122 134 H2AFY Core histone macro-H2A.1;Histone H2A yes no 2;3 1.4377E-247 204.52 2 3 0.54286 0.66503 NaN 1 Median NaN NaN NaN 0 0 Median 0.54286 0.66503 NaN 1 0 Median 8953600 4628000 4325600 0 0 0 8953600 4628000 4325600 959 709 1034;1035 1522;1523;1524;1525;1526 2457;2458;2459;2460;2461;2462;2463;2464;2465;2466;2467;2468;2469;2470;2471;2472 2459 1945 1 GKLEAIITPPPAKK PNIHPELLAKKRGSKGKLEAIITPPPAKKA KGKLEAIITPPPAKKAKSPSQKKPVSKKAG K G K K K A 2 0 0 0 0 0 1 1 0 2 1 3 0 0 3 0 1 0 0 0 0 0 14 2 1461.8919 O75367;D6RCF2 O75367 122 135 H2AFY Core histone macro-H2A.1;Histone H2A yes no 3 4.3348E-144 174.65 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 960 709 1036 1527;1528 2473;2474;2475;2476;2477;2478;2479;2480;2481 2476 1945 0 GKLPIVNEDDELVAIIAR ITLKEANEILQRSKKGKLPIVNEDDELVAI PIVNEDDELVAIIARTDLKKNRDYPLASKD K G K A R T 2 1 1 2 0 0 2 1 0 3 2 1 0 0 1 0 0 0 0 2 0 0 18 1 1964.0942 H0Y4R1;P12268;Q6QE17;E7ETK5;B7Z1G4 H0Y4R1 139 156 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes no 3 2.9557E-07 61.648 1 6.2994 8.8419 NaN 1 Median NaN NaN NaN 0 0 Median 6.2994 8.8419 NaN 1 0 Median 14910000 2075100 12835000 0 0 0 14910000 2075100 12835000 961 648 1037 1529 2482 2482 1 GLAITFVSDENDAK TYLHRVARAGRFGTKGLAITFVSDENDAKI KGLAITFVSDENDAKILNDVQDRFEVNVAE K G L A K I 2 0 1 2 0 0 1 1 0 1 1 1 0 1 0 1 1 0 0 1 0 0 14 0 1478.7253 B4DX78;O00148;Q69YT6;H0Y400;A0A0G2JJZ9;B4DP52;A0A024RCM3;Q13838 B4DX78 427 440 DDX39A;DKFZp547B159;DDX39B;hCG_2005638 ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B yes no 2 0.0053054 46.606 1 0.34807 0.43436 NaN 1 Median 0.34807 0.43436 NaN 1 0 Median NaN NaN NaN 0 0 Median 4711000 3019200 1691800 4711000 3019200 1691800 0 0 0 962 507 1038 1530 2483 2483 1 GLASPTAITPVASAICGK NDSTQFTVAGRMVKKGLASPTAITPVASAI SPTAITPVASAICGKTRGTTPVSKPLEDIE K G L G K T 4 0 0 0 1 0 0 2 0 2 1 1 0 0 2 2 2 0 0 1 0 0 18 0 1712.9131 Q659E9;B4E3H1;B4E3N7 Q659E9 165 182 DKFZp586H1823 yes no 2 1.1631E-06 56.215 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 963 523 1039 1531 2484 2484 758;1894 0 GLCIERLSASPAQEK DKSVQTEKTIHKLTRGLCIERLSASPAQEK GLCIERLSASPAQEKEAAPGKSELCSSPLG R G L E K E 2 1 0 0 1 1 2 1 0 1 2 1 0 0 1 2 0 0 0 0 0 0 15 1 1657.8458 Q9Y2F5 Q9Y2F5 507 521 ICE1 Little elongation complex subunit 1 yes yes 2 4.1062E-07 74.296 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 964 962 1040 1532 2485 2485 1729;1730 0 GLDVDSLVIEHIQVNK LLHMLKNAESNAELKGLDVDSLVIEHIQVN LDVDSLVIEHIQVNKAPKMRRRTYRAHGRI K G L N K A 0 0 1 2 0 1 1 1 1 2 2 1 0 0 0 1 0 0 0 3 0 0 16 0 1777.9574 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3QLC8;A0A0A0MRF8;J3KRB3;A0A087WWH0;J3QS96;A4D1R6;A4D1R5 A0A087WXM6 106 121 RPL17;hCG_24487;RPL17-C18orf32;LOC402695;LOC202789 60S ribosomal protein L17 yes no 2;3 0 322.31 4 0.28265 0.35558 6.0368 3 Median NaN NaN NaN 0 0 Median 0.28265 0.35558 6.0368 3 0 Median 938090000 731610000 206480000 0 0 0 938090000 731610000 206480000 965 43 1041 1533;1534;1535;1536 2486;2487;2488;2489;2490;2491 2488 6 GLEGERPAR ILRRSRPETGRPRPKGLEGERPARLTRGEA GRPRPKGLEGERPARLTRGEADRDTYRRSA K G L A R L 1 2 0 0 0 0 2 2 0 0 1 0 0 0 1 0 0 0 0 0 0 0 9 1 983.51484 Q59GE4;P46783;Q14489;F6U211;S4R435 Q59GE4 117 125 RPS10;RPS10-NUDT3 40S ribosomal protein S10 yes no 2;3 0.005684 65.038 2 0.93799 1.6222 1.5998 2 Median NaN NaN NaN 0 0 Median 0.93799 1.6222 1.5998 2 0 Median 111630000 56439000 55189000 0 0 0 111630000 56439000 55189000 966 765 1042 1537;1538 2492;2493 2492 2 GLGPPSPPAPPR NGGGAGDSLPGSPSRGLGPPSPPAPPRGPA PSRGLGPPSPPAPPRGPAGEAGASPPVRRV R G L P R G 1 1 0 0 0 0 0 2 0 0 1 0 0 0 6 1 0 0 0 0 0 0 12 0 1141.6244 A0A140TA73;A0A024R732;Q13425 A0A140TA73 90 101 SNTB2 Beta-2-syntrophin yes no 2 0.0033778 49.423 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 967 87 1043 1539 2494 2494 121 0 GLLYDSDEEDEERPARK PLTSSPGRGLGRMRRGLLYDSDEEDEERPA LYDSDEEDEERPARKRRQVERATEDGEEDE R G L R K R 1 2 0 3 0 0 4 1 0 0 2 1 0 0 1 1 0 0 1 0 0 0 17 2 2020.9338 B3KXZ4;B7Z8Z6;P49736 B3KXZ4 38 54 MCM2 DNA helicase;DNA replication licensing factor MCM2 yes no 3 2.5643E-05 45.704 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 968 455 1044 1540 2495 2495 666 0 GLPEAEDSPCRAPVLPK PVPRGKSLRSRRVHRGLPEAEDSPCRAPVL PEAEDSPCRAPVLPKDLLLPESCTGPPQGQ R G L P K D 2 1 0 1 1 0 2 1 0 0 2 1 0 0 4 1 0 0 0 1 0 0 17 1 1834.9247 Q7Z5J4 Q7Z5J4 1006 1022 RAI1 Retinoic acid-induced protein 1 yes yes 3 3.6415E-05 43.024 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 969 870 1045 1541 2496;2497 2497 1453 0 GLPFYAGLSPAGK TDALDSVRERLHGGKGLPFYAGLSPAGKLV GKGLPFYAGLSPAGKLVAYKRKPSSSTSGL K G L G K L 2 0 0 0 0 0 0 3 0 0 2 1 0 1 2 1 0 0 1 0 0 0 13 0 1276.6816 B9EGR5;Q8IWI9 B9EGR5 1449 1461 MGA MAX gene-associated protein yes no 2 0.0026177 52.823 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 970 555 1046 1542;1543 2498;2499 2499 828 0 GNDPLTSSPGR SESFTMASSPAQRRRGNDPLTSSPGRGLGR QRRRGNDPLTSSPGRGLGRMRRGLLYDSDE R G N G R G 0 1 1 1 0 0 0 2 0 0 1 0 0 0 2 2 1 0 0 0 0 0 11 0 1099.5258 B3KXZ4;B7Z8Z6;P49736;C9J013;C9JZ21;F8WDM3 B3KXZ4 20 30 MCM2 DNA helicase;DNA replication licensing factor MCM2 yes no 2 0.00040193 68.856 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 971 455 1047 1544 2500 2500 667 0 GNQSGRSPNNPFSR SRSALQSYLKRHESRGNQSGRSPNNPFSRV RGNQSGRSPNNPFSRVALEFGSEEPRHSEA R G N S R V 0 2 3 0 0 1 0 2 0 0 0 0 0 1 2 3 0 0 0 0 0 0 14 1 1516.7131 A0A024R0F1;Q9UNY4 A0A024R0F1 877 890 TTF2 Transcription termination factor 2 yes no 2;3 2.9253E-05 78.661 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 972 15 1048 1545;1546;1547 2501;2502;2503;2504 2502 17 0 GNSGSEACTSSFLR AGLSSINKEGEEPTKGNSGSEACTSSFLRL KGNSGSEACTSSFLRLSFASETPLEKEPHS K G N L R L 1 1 1 0 1 0 1 2 0 0 1 0 0 1 0 4 1 0 0 0 0 0 14 0 1471.6362 A0A0C4DGM5;A0A024R9R5;Q9H2Y7 A0A0C4DGM5 485 498 ZNF106;ZFP106 Zinc finger protein 106 yes no 2 0.00014093 65.805 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 973 121 1049 1548 2505 2505 174 0 GNSQLLLS SSRPPPAKRKKSQSRGNSQLLLS_______ RKKSQSRGNSQLLLS_______________ R G N L S - 0 0 1 0 0 1 0 1 0 0 3 0 0 0 0 2 0 0 0 0 0 0 8 0 830.44978 P46087 P46087 805 812 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 1 1.271E-50 131.46 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 974 763 1050 1549 2506;2507;2508 2508 1230 0 GNYDEGFGHRPHK RIYCKPHFNQLFKSKGNYDEGFGHRPHKDL SKGNYDEGFGHRPHKDLWASKNENEEILER K G N H K D 0 1 1 1 0 0 1 3 2 0 0 1 0 1 1 0 0 0 1 0 0 0 13 1 1512.6858 B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2;F8VQE1 B4DN52 369 381 LIMA1 LIM domain and actin-binding protein 1 yes no 3 0.0057199 39.219 1 0.79913 1.0199 NaN 1 Median 0.79913 1.0199 NaN 1 0 Median NaN NaN NaN 0 0 Median 7275900 3164000 4111900 7275900 3164000 4111900 0 0 0 975 485 1051 1550 2509 2509 1 GPAGEAGASPPVR PSRGLGPPSPPAPPRGPAGEAGASPPVRRV PRGPAGEAGASPPVRRVRVVKQEAGGLGIS R G P V R R 3 1 0 0 0 0 1 3 0 0 0 0 0 0 3 1 0 0 0 1 0 0 13 0 1164.5887 A0A140TA73;A0A024R732;Q13425 A0A140TA73 102 114 SNTB2 Beta-2-syntrophin yes no 2 0.00074407 66.989 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 976 87 1052 1551 2510 2510 122 0 GPAGEAGASPPVRR PSRGLGPPSPPAPPRGPAGEAGASPPVRRV RGPAGEAGASPPVRRVRVVKQEAGGLGISI R G P R R V 3 2 0 0 0 0 1 3 0 0 0 0 0 0 3 1 0 0 0 1 0 0 14 1 1320.6898 A0A140TA73;A0A024R732;Q13425 A0A140TA73 102 115 SNTB2 Beta-2-syntrophin yes no 3 0.00011912 60.474 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 977 87 1053 1552 2511 2511 122 0 GPAVGIDLGTTYSCVGVFQHGK ______________________________ LGTTYSCVGVFQHGKVEIIANDQGNRTTPS K G P G K V 1 0 0 1 1 1 0 5 1 1 1 1 0 1 1 1 2 0 1 3 0 0 22 0 2262.1103 E9PKE3;V9HW22;Q53GZ6;P11142;B3KTV0;Q53HF2;E9PNE6;E9PN25;E9PPY6;E9PQQ4;E9PQK7;E9PK54;E9PLF4;B4DTX2;E9PI65 E9PKE3 4 25 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein yes no 3 4.3275E-12 62.684 1 0.80508 0.99413 NaN 1 Median NaN NaN NaN 0 0 Median 0.80508 0.99413 NaN 1 0 Median 24758000 13471000 11287000 0 0 0 24758000 13471000 11287000 978 623 1054 1553 2512 2512 1 GPEEEEIGSPEPMAAPASASQK SQKELLGPPEAKRARGPEEEEIGSPEPMAA GSPEPMAAPASASQKLSPLQKLSSMDPAML R G P Q K L 4 0 0 0 0 1 5 2 0 1 0 1 1 0 4 3 0 0 0 0 0 0 22 0 2211.0001 B7Z9T5;A0A024R632;H3BRB3;Q14807 B7Z9T5 336 357 KIF22 Kinesin-like protein;Kinesin-like protein KIF22 yes no 2 1.1361E-06 43.37 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 979 78 1055 1554 2513;2514 2513 14 106;107 0 GPEEEEIGSPEPMAAPASASQKLSPLQK SQKELLGPPEAKRARGPEEEEIGSPEPMAA AAPASASQKLSPLQKLSSMDPAMLERLLSL R G P Q K L 4 0 0 0 0 2 5 2 0 1 2 2 1 0 5 4 0 0 0 0 0 0 28 1 2877.4066 B7Z9T5;A0A024R632;H3BRB3;Q14807 B7Z9T5 336 363 KIF22 Kinesin-like protein;Kinesin-like protein KIF22 yes no 3 2.9775E-32 82.765 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 980 78 1056 1555;1556 2515;2516;2517 2516 14 106;107 0 GPESESEDHRASGEVR QGLIRICSKPVVLPKGPESESEDHRASGEV PESESEDHRASGEVRTGKWKVPTYKDYVDL K G P V R T 1 2 0 1 0 0 4 2 1 0 0 0 0 0 1 3 0 0 0 1 0 0 16 1 1740.7663 P78527;B4DL41 P78527 500 515 PRKDC DNA-dependent protein kinase catalytic subunit yes no 3 2.7147E-06 67.449 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 981 795 1057 1557 2518 2518 1267 0 GPGEPDSPTPLHPPTPPILSTDR QPPLMKKIIPAPKPKGPGEPDSPTPLHPPT TPLHPPTPPILSTDRSREDSPELNPPPGIE K G P D R S 0 1 0 2 0 0 1 2 1 1 2 0 0 0 8 2 3 0 0 0 0 0 23 0 2377.1914 Q03164 Q03164 1831 1853 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes yes 3 2.1654E-39 114.79 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 982 798 1058;1059 1558;1559;1560 2519;2520;2521;2522 2522 1283;1991 0 GPGQPSSPQRLDR ALRRLGARGGGKGRKGPGQPSSPQRLDRLS RKGPGQPSSPQRLDRLSGLADQMVARGNLG K G P D R L 0 2 0 1 0 2 0 2 0 0 1 0 0 0 3 2 0 0 0 0 0 0 13 1 1393.7062 Q5QTR6;A0A024QZC1;O95400 Q5QTR6 38 50 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 yes no 3 7.9817E-05 78.69 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 983 3 1060 1561;1562 2523;2524;2525 2525 7 0 GPIHSPVELK VGKSSDGEDEQQVPKGPIHSPVELKHVHAT QQVPKGPIHSPVELKHVHATVVKVPEVNSS K G P L K H 0 0 0 0 0 0 1 1 1 1 1 1 0 0 2 1 0 0 0 1 0 0 10 0 1075.6026 D9IVD5;A0A024R241;Q16649 D9IVD5 297 306 NFIL3 Nuclear factor interleukin-3-regulated protein yes no 2;3 2.0968E-20 118.9 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 984 41 1061 1563;1564;1565 2526;2527;2528;2529 2527 38 0 GPKSDDDGFEIVPIEDPAK EEESWEPLRGKKRSRGPKSDDDGFEIVPIE DDDGFEIVPIEDPAKHRILDPEGLALGAVI R G P A K H 1 0 0 4 0 0 2 2 0 2 0 2 0 1 3 1 0 0 0 1 0 0 19 1 2027.9688 B4DKU3;Q8IY81 B4DKU3 520 538 FTSJ3 pre-rRNA processing protein FTSJ3 yes no 2 2.2934E-08 69.188 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 985 474 1062 1566 2530;2531;2532 2530 680 0 GPLSPFNSR LPNSNNNSSSWLNVKGPLSPFNSRAAAGPA SWLNVKGPLSPFNSRAAAGPAHHKLSYLGR K G P S R A 0 1 1 0 0 0 0 1 0 0 1 0 0 1 2 2 0 0 0 0 0 0 9 0 973.49813 G3V3I3;G3V278;A0A0U1RR71;A1L390 G3V3I3 73 81 PLEKHG3 Pleckstrin homology domain-containing family G member 3 yes no 2 0.0018228 62.408 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 986 274 1063 1567 2533;2534 2533 373 0 GPPDFSSDEEREPTPVLGSGAAAAGR TARNRPPLPAGTNSKGPPDFSSDEEREPTP EPTPVLGSGAAAAGRSRAAVGRKATKKTDK K G P G R S 4 2 0 2 0 0 3 4 0 0 1 0 0 1 4 3 1 0 0 1 0 0 26 1 2569.2045 P42166;A0A024RBH7;Q59G12;G5E972;A0A024RBE7;P42167 P42166 61 86 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 3 2.5411E-58 128.22 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 987 757;141 1064;1065 1568;1569;1570 2535;2536;2537;2538;2539 2538 201;202;1803 0 GPPQSPVFEGVYNNSR GAAAIGSARGQSTGKGPPQSPVFEGVYNNS PPQSPVFEGVYNNSRMLHFLTAVVGSTCDV K G P S R M 0 1 2 0 0 1 1 2 0 0 0 0 0 1 3 2 0 0 1 2 0 0 16 0 1746.8325 H3BUF6;Q8WWM7;H3BSK9 H3BUF6 107 122 ATXN2L Ataxin-2-like protein yes no 2 1.0091E-07 69.594 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 988 668 1066 1571 2540;2541;2542 2540 993 0 GPQPPTVSPIR PFEKAAFQKQNDTPKGPQPPTVSPIRSSRP DTPKGPQPPTVSPIRSSRPPPAKRKKSQSR K G P I R S 0 1 0 0 0 1 0 1 0 1 0 0 0 0 4 1 1 0 0 1 0 0 11 0 1147.635 P46087 P46087 779 789 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 2 0.00028585 71.806 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 989 763 1067 1572;1573 2543;2544;2545;2546 2543 1231 0 GPSPSPVGSPASVAQSR SPFSPHTSPHLPGIRGPSPSPVGSPASVAQ SPSPVGSPASVAQSRSGPLSPAAVPGNQMP R G P S R S 2 1 0 0 0 1 0 2 0 0 0 0 0 0 4 5 0 0 0 2 0 0 17 0 1579.7954 A0A087WUV6;Q96TA9;Q4LE49;H0Y488;A0A1B0GTU5;A0A0S2Q0B1;O14497 A0A087WUV6 311 327 ARID1A;ARID1A variant protein AT-rich interactive domain-containing protein 1A yes no 2 2.5413E-08 58.848 3 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 990 184 1068;1069 1574;1575;1576;1577 2547;2548;2549;2550;2551 2549 254;255;256 0 GPSSVEDIK QESFKKQEKTPKTPKGPSSVEDIKAKMQAS TPKTPKGPSSVEDIKAKMQASIEKAH____ K G P I K A 0 0 0 1 0 0 1 1 0 1 0 1 0 0 1 2 0 0 0 1 0 0 9 0 930.46583 A0A140VJQ2;A0A0S2Z4G7;A4ZU86;A0A0S2Z491;P06748;Q9NX34;Q9BTI9;A0A024R3V9 A0A140VJQ2 240 248 NPM1;hCG_37498 Nucleophosmin yes no 2 0.0068831 60.59 2 0.65078 0.81674 NaN 1 Median NaN NaN NaN 0 0 Median 0.65078 0.81674 NaN 1 0 Median 4252100 2839400 1412700 0 0 0 4252100 2839400 1412700 991 263 1070 1578;1579 2552;2553 2552 2 GPYHFR YLAFLRKRMNTNPSRGPYHFRAPSRIFWRT KRMNTNPSRGPYHFRAPSRIFWRTVRGMLP R G P F R A 0 1 0 0 0 0 0 1 1 0 0 0 0 1 1 0 0 0 1 0 0 0 6 0 775.37656 Q9BSQ6;Q5QTS3;Q53H34;M0QYS1;P40429;Q8J015;B4DNC8;Q0VGL3 Q9BSQ6 67 72 RPL13A;RPL13a 60S ribosomal protein L13a yes no 2 0.020096 81.297 1 0.68947 0.96833 NaN 1 Median NaN NaN NaN 0 0 Median 0.68947 0.96833 NaN 1 0 Median 92056000 54128000 37928000 0 0 0 92056000 54128000 37928000 992 691 1071 1580 2554 2554 1 GQEADLEAGGEEVPEANGSAGK HQENSRNQKPKKRKKGQEADLEAGGEEVPE AGGEEVPEANGSAGKRSKKKKQRKDSASEE K G Q G K R 4 0 1 1 0 1 5 5 0 0 1 1 0 0 1 1 0 0 0 1 0 0 22 0 2113.94 Q9NX58 Q9NX58 226 247 LYAR Cell growth-regulating nucleolar protein yes yes 2 5.011E-31 112.36 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 993 944 1072 1581 2555;2556 2556 1677 0 GQGTPPSGPGVVR DDGTDSEAEAVQQPRGQGTPPSGPGVVRAG PRGQGTPPSGPGVVRAGVLGAAGDRARPPE R G Q V R A 0 1 0 0 0 1 0 4 0 0 0 0 0 0 3 1 1 0 0 2 0 0 13 0 1207.6309 Q9UMN6 Q9UMN6 2080 2092 KMT2B Histone-lysine N-methyltransferase 2B yes yes 2 1.5394E-53 138.55 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 994 958 1073 1582;1583 2557;2558;2559 2559 2057 0 GQHTLKSPPSQSVQLNDSLSK TEKRTRRKLMPSPLKGQHTLKSPPSQSVQL SPPSQSVQLNDSLSKELQPIVYTPEDCRKA K G Q S K E 0 0 1 1 0 3 0 1 1 0 3 2 0 0 2 5 1 0 0 1 0 0 21 1 2250.1604 B2R6H3;Q8NI77 B2R6H3 678 698 KIF18A Kinesin-like protein;Kinesin-like protein KIF18A yes no 3 2.6232E-07 44.848 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 995 404 1074 1584 2560 2560 601 0 GQLEQITGK RPQLLKNALQRAVERGQLEQITGKGASGTF QRAVERGQLEQITGKGASGTFQLKKSGEKP R G Q G K G 0 0 0 0 0 2 1 2 0 1 1 1 0 0 0 0 1 0 0 0 0 0 9 0 972.52401 Q5SSJ5;X6RGJ2;B0QZK4 Q5SSJ5 312 320 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 2 0.0088122 57.59 1 0.47499 0.6326 NaN 1 Median NaN NaN NaN 0 0 Median 0.47499 0.6326 NaN 1 0 Median 4774200 3435900 1338300 0 0 0 4774200 3435900 1338300 996 842 1075 1585 2561 2561 1 GQNLLQTQDHAK LKSLPDTELMKDTARGQNLLQTQDHAKAPK TARGQNLLQTQDHAKAPKSEKGKITKMPCQ R G Q A K A 1 0 1 1 0 3 0 1 1 0 2 1 0 0 0 0 1 0 0 0 0 0 12 0 1351.6844 P46013 P46013 982 993 MKI67 Antigen KI-67 yes yes 2;3 1.1443E-81 188.87 2 1.0167 1.2817 0.090485 2 Median NaN NaN NaN 0 0 Median 1.0167 1.2817 0.090485 2 0 Median 159230000 81983000 77251000 0 0 0 159230000 81983000 77251000 997 762 1076 1586;1587 2562;2563;2564 2562 3 GQQQEPGRYPSR PVKTRGKLSSSFSSRGQQQEPGRYPSRSQQ SSRGQQQEPGRYPSRSQQSTPKTTVSSKTG R G Q S R S 0 2 0 0 0 3 1 2 0 0 0 0 0 0 2 1 0 0 1 0 0 0 12 1 1401.6749 D3DS96;Q9NRL2;B3KND8;Q59G54 D3DS96 1285 1296 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes no 3 0.005937 43.544 1 0.58508 0.76394 NaN 1 Median NaN NaN NaN 0 0 Median 0.58508 0.76394 NaN 1 0 Median 4226300 2212900 2013400 0 0 0 4226300 2212900 2013400 998 591 1077 1588 2565 2565 1 GQSPAGDGSPEPPTPR RLLPTKNNVRSAWYRGQSPAGDGSPEPPTP QSPAGDGSPEPPTPRYNTWVLQDTVLESHL R G Q P R Y 1 1 0 1 0 1 1 3 0 0 0 0 0 0 5 2 1 0 0 0 0 0 16 0 1548.7168 A0A0A0MRW6;B4DF80;Q9H6R4 A0A0A0MRW6 281 296 NOL6 Nucleolar protein 6 yes no 2 2.5259E-59 138.05 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 999 215 1078 1589;1590;1591;1592 2566;2567;2568;2569;2570;2571;2572 2570 296;297 0 GQVIIISDSDDDDDER RCFTANQNNVGDTSRGQVIIISDSDDDDDE QVIIISDSDDDDDERILSLEKLTKQDKICL R G Q E R I 0 1 0 6 0 1 1 1 0 3 0 0 0 0 0 2 0 0 0 1 0 0 16 0 1790.7806 A0A024R8E8;Q7Z333 A0A024R8E8 110 125 SETX Probable helicase senataxin yes no 2 0.00096051 40.237 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1000 104 1079 1593 2573 2573 151;152 0 GQVVENNSVTEFSEEK SFEMTEFNQALEEIKGQVVENNSVTEFSEE QVVENNSVTEFSEEKNRTENYNRQDGQRVQ K G Q E K N 0 0 2 0 0 1 4 1 0 0 0 1 0 1 0 2 1 0 0 3 0 0 16 0 1794.8272 Q9NVB0;Q9BVS4;H0Y919 Q9NVB0 97 112 RIOK2 Serine/threonine-protein kinase RIO2 yes no 2 9.1181E-07 77.078 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1001 920 1080 1594 2574 2574 1603 0 GRAEGEWEDQEALDYFSDK NTRDKEASKEKGSEKGRAEGEWEDQEALDY GEWEDQEALDYFSDKESGKQKFNDSEGDDT K G R D K E 2 1 0 3 0 1 4 2 0 0 1 1 0 1 0 1 0 1 1 0 0 0 19 1 2243.9607 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 Q6DCA8 369 387 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 5.9016E-09 67.827 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1002 622 1081 1595 2575;2576;2577 2577 949 0 GREVSPSDVR SSDKQLRIKHVRRVRGREVSPSDVREDSNL VRRVRGREVSPSDVREDSNLESSQLTVQAE R G R V R E 0 2 0 1 0 0 1 1 0 0 0 0 0 0 1 2 0 0 0 2 0 0 10 1 1100.5574 Q8WYP5;B3KTD2;B3KVE5;B3KRD0 Q8WYP5 1940 1949 AHCTF1 Protein ELYS yes no 2 0.0080118 84.365 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1003 897 1082 1596 2578 2578 1522 0 GRGHVQPIR ______________________________ NGRAKKGRGHVQPIRCTNCARCVPKDKAIK K G R I R C 0 2 0 0 0 1 0 2 1 1 0 0 0 0 1 0 0 0 0 1 0 0 9 1 1018.5784 A0A024RB14;P62854;Q5JNZ5;Q75MH1 A0A024RB14 14 22 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 yes no 3 0.0039527 51.949 1 0.83411 1.0767 NaN 1 Median 0.83411 1.0767 NaN 1 0 Median NaN NaN NaN 0 0 Median 11355000 5321400 6033300 11355000 5321400 6033300 0 0 0 1004 136 1083 1597 2579 2579 1 GRGPSPEGSSSTESSPEHPPK PRALPRRSRSGSSSKGRGPSPEGSSSTESS EGSSSTESSPEHPPKSRTARRGSRSSPEPK K G R P K S 0 1 0 0 0 0 3 3 1 0 0 1 0 0 5 6 1 0 0 0 0 0 21 1 2105.9614 A0A140VK53;Q9UQ35;O60382 A0A140VK53 1644 1664 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 yes no 3 6.2978E-10 51.566 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1005 284 1084;1085 1598;1599 2580;2581 2581 401;402 0 GRLDSELR INNLRRQLDGIVGERGRLDSELRNMQDLVE DGIVGERGRLDSELRNMQDLVEDFKNKYED R G R L R N 0 2 0 1 0 0 1 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 8 1 944.50394 CON__P13647;P13647;B4E1T1;B4DRR0;B4DRU6;CON__P48668;CON__P04259;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;F8W0C6;B4DWU6;B2R853;B4DKV4;CON__Q5XKE5;Q5XKE5;B4DRY0;CON__Q5XQN5;CON__Q922U2;CON__P50446 CON__Q5XQN5 239 246 KRT5;KRT6C;KRT6A;KRT79 Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 79 no no 2 0.027434 62.969 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 117230000 117230000 0 0 0 0 117230000 117230000 0 + 1006 584;580 1086 1600 2582 2582 1 GRLSPVPVPR DYYRDDFYDRLFDYRGRLSPVPVPRAVPVK LFDYRGRLSPVPVPRAVPVKRPRVTVPLVR R G R P R A 0 2 0 0 0 0 0 1 0 0 1 0 0 0 3 1 0 0 0 2 0 0 10 1 1076.6455 Q5QPM1;Q5QPL9;A8K4T9;Q53GL6;Q9UKM9;Q5QPM0 Q5QPM1 132 141 RALY RNA-binding protein Raly yes no 2 2.6676E-09 106.49 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1007 355 1087 1601 2583;2584;2585 2584 545 0 GRPDPYAYIPLNR AEYKAKKAKGDVKKKGRPDPYAYIPLNRSK KKGRPDPYAYIPLNRSKLNRRKKMKLQGQF K G R N R S 1 2 1 1 0 0 0 1 0 1 1 0 0 0 3 0 0 0 2 0 0 0 13 1 1530.7943 B3KMR5;Q5JTH9;B3KPQ2;B3KY97 B3KMR5 1246 1258 RRP12 RRP12-like protein yes no 3 0.029107 23.956 1 0.69896 0.87349 NaN 1 Median NaN NaN NaN 0 0 Median 0.69896 0.87349 NaN 1 0 Median 2869200 1686400 1182800 0 0 0 2869200 1686400 1182800 1008 430 1088 1602 2586 2586 1 GRPPAEKLSPNPPK KDPAKEDVEKAKKRRGRPPAEKLSPNPPKL RGRPPAEKLSPNPPKLTKQMNAIIDTV___ R G R P K L 1 1 1 0 0 0 1 1 0 0 1 2 0 0 5 1 0 0 0 0 0 0 14 2 1486.8256 A0A0U1RRJ4;A0A0U1RRD6;A0A0U1RRF8;A0A0A0MSS5;F6UH26;A0A0U1RQU0;A0A0U1RR09;F6XE55;A0A0U1RQW7;A0A0U1RRN2;B1ALG1;A0A0U1RR83;A0A0U1RQX3;F6T8Q0;B1ALG2;A0A0U1RR26;A0A0U1RRG6;B4DNT1;Q8N9Q1;B1ALF6;B4DSC8;A0A0U1RQZ9;F6VDE0;P51531 A0A0U1RRJ4 43 56 SMARCA2 Probable global transcription activator SNF2L2 yes no 3 3.8962E-05 78.95 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1009 221 1089 1603 2587;2588 2588 309 0 GRPPAEKLSPNPPNLTK RSRDKDDESKKQKKRGRPPAEKLSPNPPNL PPAEKLSPNPPNLTKKMKKIVDAVIKYKDS R G R T K K 1 1 2 0 0 0 1 1 0 0 2 2 0 0 5 1 1 0 0 0 0 0 17 2 1815.0003 A7E2E1;Q9HBD4;B9EGQ8;A0A0A0MT49;P51532;B4E0F1;B4DSI8;B3KNW7 A7E2E1 1444 1460 SMARCA4 Transcription activator BRG1 yes no 3 1.1738E-14 99.407 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1010 224 1090 1604;1605 2589;2590;2591;2592;2593 2591 312 0 GSATNYITR ______________________________ KKKYERGSATNYITRNKARKKLQLSLADFR R G S T R N 1 1 1 0 0 0 0 1 0 1 0 0 0 0 0 1 2 0 1 0 0 0 9 0 981.48796 B5MCF9;B2RDF2;O00541 B5MCF9 12 20 PES1 Pescadillo homolog yes no 2 0.0061781 55.549 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3967300 3967300 0 0 0 0 3967300 3967300 0 1011 415 1091 1606 2594 2594 1 GSAVDASVQEESPVTK KGDSSHSEKKTAKRKGSAVDASVQEESPVT SAVDASVQEESPVTKEDSALCGGGDICKST K G S T K E 2 0 0 1 0 1 2 1 0 0 0 1 0 0 1 3 1 0 0 3 0 0 16 0 1602.7737 O95613;Q9H848;Q8IWJ7 O95613 43 58 PCNT Pericentrin yes no 2 9.0436E-07 67.994 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1012 721 1092 1607 2595 2595 1103 0 GSAVHQLSEELR PDPDTGLYMLQLAGRGSAVHQLSEELRCAL AGRGSAVHQLSEELRCALRDARVTPGSGAL R G S L R C 1 1 0 0 0 1 2 1 1 0 2 0 0 0 0 2 0 0 0 1 0 0 12 0 1324.6735 A0A075B730;A0A087X1U6;P58107 A0A075B730 2396 2407 EPPK1 Epiplakin yes no 2 0.0011143 64.918 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1013 176 1093 1608 2596 2596 1 GSDDAPYSPTAR DEDNPIFKSRSKKRKGSDDAPYSPTARVGP KRKGSDDAPYSPTARVGPSVPRQDRPVREG K G S A R V 2 1 0 2 0 0 0 1 0 0 0 0 0 0 2 2 1 0 1 0 0 0 12 0 1235.5418 O75151;E7ET14;A0A087WW48;Q6P2C5;Q8N359;B4DH04 O75151 898 909 PHF2 Lysine-specific demethylase PHF2 yes no 2 0.013912 45.825 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1014 708 1094 1609 2597 2597 1058 0 GSDSEDGEFEIQAEDDAR KKGLRKRRGAASQARGSDSEDGEFEIQAED SEDGEFEIQAEDDARARKLGPGRPLPTFPT R G S A R A 2 1 0 4 0 1 4 2 0 1 0 0 0 1 0 2 0 0 0 0 0 0 18 0 1968.7821 Q8TDD1;H0YHZ9 Q8TDD1 38 55 DDX54 ATP-dependent RNA helicase DDX54 yes no 2 1.3613E-23 107.5 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1015 889 1095 1610;1611 2598;2599;2600;2601;2602 2600 1495;1496 0 GSEHQAIVQHLEK LHQDLVNRKARKLRKGSEHQAIVQHLEKSF RKGSEHQAIVQHLEKSFAIASLVETGHLAA K G S E K S 1 0 0 0 0 2 2 1 2 1 1 1 0 0 0 1 0 0 0 1 0 0 13 0 1474.7528 Q14690;B4DH82 Q14690 925 937 PDCD11 Protein RRP5 homolog yes no 3 0.0044013 34.338 1 0.60182 0.78436 NaN 1 Median NaN NaN NaN 0 0 Median 0.60182 0.78436 NaN 1 0 Median 6718500 4184700 2533800 0 0 0 6718500 4184700 2533800 1016 816 1096 1612 2603 2603 1 GSFSDTGLGDGK EQKQTNTDKEKIKEKGSFSDTGLGDGKMKS KEKGSFSDTGLGDGKMKSDSFAPKTDSEKP K G S G K M 0 0 0 2 0 0 0 4 0 0 1 1 0 1 0 2 1 0 0 0 0 0 12 0 1139.5095 Q9Y2W1 Q9Y2W1 376 387 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 8.0225E-21 115.37 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1017 963 1097 1613 2604;2605 2604 1738;1739 0 GSGDISSDSIDHSPAK TINAGEELTFDYQMKGSGDISSDSIDHSPA SGDISSDSIDHSPAKK______________ K G S A K K 1 0 0 3 0 0 0 2 1 2 0 1 0 0 1 5 0 0 0 0 0 0 16 0 1571.7063 Q5JSS2;H0Y306;Q9H5I1 Q5JSS2 136 151 SUV39H2 Histone-lysine N-methyltransferase SUV39H2 yes no 2 0.00022994 55.546 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1018 645 1098 1614 2606;2607 2606 976 0 GSGTASDDEFENLR EVANCCIRIALPAPRGSGTASDDEFENLRI RGSGTASDDEFENLRIKGPNAVQLVKTTPL R G S L R I 1 1 1 2 0 0 2 2 0 0 1 0 0 1 0 2 1 0 0 0 0 0 14 0 1496.6379 Q5H924;A0A024R9Y3;A0A024R9U8;A0A024R9W5;Q7Z6Z7 Q5H924 935 948 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 2 0.00016751 65.092 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1019 122 1099 1615 2608 2608 175 0 GSISSTSEVHSPPNVGLR RSGEAVISNTSRLSRGSISSTSEVHSPPNV SSTSEVHSPPNVGLRRSGQIEGVRQMHSNA R G S L R R 0 1 1 0 0 0 1 2 1 1 1 0 0 0 2 5 1 0 0 2 0 0 18 0 1822.9173 Q8WWQ0 Q8WWQ0 673 690 PHIP PH-interacting protein yes yes 2;3 1.1288E-97 155.76 1 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1020 894 1100 1616;1617;1618 2609;2610;2611;2612;2613;2614 2609 1503 0 GSISSTSEVHSPPNVGLRR RSGEAVISNTSRLSRGSISSTSEVHSPPNV STSEVHSPPNVGLRRSGQIEGVRQMHSNAP R G S R R S 0 2 1 0 0 0 1 2 1 1 1 0 0 0 2 5 1 0 0 2 0 0 19 1 1979.0185 Q8WWQ0 Q8WWQ0 673 691 PHIP PH-interacting protein yes yes 3 4.0226E-07 50.776 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1021 894 1101 1619 2615 2615 1503 0 GSLGGGFSSGGFSGGSFSR GGGGGVSSLRISSSKGSLGGGFSSGGFSGG GGFSSGGFSGGSFSRGSSGGGCFGGSSGGY K G S S R G 0 1 0 0 0 0 0 8 0 0 1 0 0 3 0 6 0 0 0 0 0 0 19 0 1706.7649 CON__P13645;P13645 CON__P13645 41 59 KRT10 Keratin, type I cytoskeletal 10 yes no 2 0.0047893 39.143 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 10749000 10749000 0 0 0 0 10749000 10749000 0 + 1022 579 1102 1620 2616 2616 1 GSLGSQGAKDEPEEELQK KRDKASGDVKEKKGKGSLGSQGAKDEPEEE GSQGAKDEPEEELQKGMGTVEGGDQSNPKS K G S Q K G 1 0 0 1 0 2 4 3 0 0 2 2 0 0 1 2 0 0 0 0 0 0 18 1 1900.9014 E7ETY2;J3KQ96;Q13428;B4DRA2;Q9UFD4 E7ETY2 1406 1423 TCOF1;DKFZp434G1035 Treacle protein yes no 3 1.9421E-05 42.746 1 1 0.67832 0.8446 NaN 1 Median NaN NaN NaN 0 0 Median 0.67832 0.8446 NaN 1 0 Median 11818000 6618200 5199600 0 0 0 11818000 6618200 5199600 1023 608 1103;1104 1621;1622 2617;2618;2619 2617 913 2 GSLLPTSPR ATPPPSPLLSELLKKGSLLPTSPRLVNESE SELLKKGSLLPTSPRLVNESEMAVASGHLN K G S P R L 0 1 0 0 0 0 0 1 0 0 2 0 0 0 2 2 1 0 0 0 0 0 9 0 926.51853 H7C128;H7C179;H7C127;B2R5V7;A8K1N6;B4DSD6 H7C128 269 277 BRD8 yes no 2 0.0099983 50.292 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1024 341 1105 1623;1624 2620;2621 2620 516;1846 0 GSPDGSLQTGKPSAPK DISPPADALKLRSPRGSPDGSLQTGKPSAP SPDGSLQTGKPSAPKKLKLDVGEAMAPPSH R G S P K K 1 0 0 1 0 1 0 3 0 0 1 2 0 0 3 3 1 0 0 0 0 0 16 1 1525.7736 E7EV54;O15451;A8K548;C9JFV4;B4DR36;Q8IZL8;B4DEX7 E7EV54 333 348 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes no 2 1.5466E-25 96.096 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1025 359 1106 1625 2622 2622 551 0 GSPEEPVVGCPLGQR IQQDVLGTKLPQLSKGSPEEPVVGCPLGQR GSPEEPVVGCPLGQRQPCRKMLPDRSRAAR K G S Q R Q 0 1 0 0 1 1 2 3 0 0 1 0 0 0 3 1 0 0 0 2 0 0 15 0 1580.7617 J3KNX4;D6W5Y8;A0A0D9SGJ8;Q2TAK8 J3KNX4 540 554 MUM1 PWWP domain-containing protein MUM1 yes no 2 2.7056E-09 96.464 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1026 253 1107 1626 2623;2624 2624 351 0 GSPETNHLIR SYLKKCRRRSAVGARGSPETNHLIRFIARQ AVGARGSPETNHLIRFIARQQNIKNARKSP R G S I R F 0 1 1 0 0 0 1 1 1 1 1 0 0 0 1 1 1 0 0 0 0 0 10 0 1122.5782 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 82 91 CDCA2 Cell division cycle-associated protein 2 yes no 2;3 0.00023724 73.632 1 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1027 615 1108 1627;1628;1629 2625;2626;2627;2628 2625 932 0 GSPGGPEFLK EALRQREKRPNTAQRGSPGGPEFLKTPLGG NTAQRGSPGGPEFLKTPLGGSFLVYESFLY R G S L K T 0 0 0 0 0 0 1 3 0 0 1 1 0 1 2 1 0 0 0 0 0 0 10 0 987.50255 Q4VC44;B3KRZ0;I3L188 Q4VC44 502 511 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 yes no 2 0.00027137 88.596 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1028 833 1109 1630;1631 2629;2630;2631;2632;2633;2634 2629 1379 0 GSPHYFSPFRPY SRSGSRGRDSPYQSRGSPHYFSPFRPY___ QSRGSPHYFSPFRPY_______________ R G S P Y - 0 1 0 0 0 0 0 1 1 0 0 0 0 2 3 2 0 0 2 0 0 0 12 1 1453.6779 A8K3M9;Q13242 A8K3M9 210 221 SRSF9 Serine/arginine-rich splicing factor 9 yes no 2 8.5801E-05 88.282 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1029 348 1110;1111 1632;1633;1634 2635;2636;2637;2638 2636 526;527 0 GSPNTASAEATLPR LRDKIASYSSLREARGSPNTASAEATLPRW RGSPNTASAEATLPRWRAGEQAQPPGDQEP R G S P R W 3 1 1 0 0 0 1 1 0 0 1 0 0 0 2 2 2 0 0 0 0 0 14 0 1370.679 Q6PJG6 Q6PJG6 741 754 BRAT1 BRCA1-associated ATM activator 1 yes yes 2 1.4215E-15 91.076 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1030 862 1112 1635 2639;2640 2640 1431 0 GSPQAGVDLSFATR YPLLATRLVHSGPGKGSPQAGVDLSFATRT KGSPQAGVDLSFATRTGTRQGIETHLFRAE K G S T R T 2 1 0 1 0 1 0 2 0 0 1 0 0 1 1 2 1 0 0 1 0 0 14 0 1404.6997 Q13884 Q13884 388 401 SNTB1 Beta-1-syntrophin yes yes 2 0.00086238 62.378 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1031 811 1113 1636 2641 2641 1330 0 GSPSVAASSPPAIPK PSDSPRSICSDSSSKGSPSVAASSPPAIPK GSPSVAASSPPAIPKVRIKTIKTSSGEIKR K G S P K V 3 0 0 0 0 0 0 1 0 1 0 1 0 0 4 4 0 0 0 1 0 0 15 0 1364.73 H0YM74;Q92610 H0YM74 360 374 ZNF592 Zinc finger protein 592 yes no 2 1.2674E-06 72.175 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1032 658 1114 1637 2642;2643;2644 2644 984;985 0 GSPTGGAQLLK MSQSGPSGSHPQGPRGSPTGGAQLLKRKRK QGPRGSPTGGAQLLKRKRKLGVVPVNGSGL R G S L K R 1 0 0 0 0 1 0 3 0 0 2 1 0 0 1 1 1 0 0 0 0 0 11 0 1027.5662 Q14684 Q14684 512 522 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 2 0.00041189 89.403 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1033 815 1115 1638;1639 2645;2646;2647;2648;2649;2650 2645 1338 0 GSSGVGLTAAVTTDQETGER YVLCTAPRAIPTTGRGSSGVGLTAAVTTDQ GLTAAVTTDQETGERRLEAGAMVLADRGVV R G S E R R 2 1 0 1 0 1 2 4 0 0 1 0 0 0 0 2 4 0 0 2 0 0 20 0 1934.9181 Q8NHX6;B4DUQ9;Q53HJ4;B2R7C5;A0A0S2Z4T1;J3KQ69;A0A0S2Z492;P25205 Q8NHX6 372 391 HCC5;MCM3 DNA helicase;DNA replication licensing factor MCM3 yes no 2 0.0046168 27.649 1 0.36564 0.46042 NaN 1 Median 0.36564 0.46042 NaN 1 0 Median NaN NaN NaN 0 0 Median 3927800 2477100 1450700 3927800 2477100 1450700 0 0 0 1034 264 1116 1640 2651 2651 1 GSVHSVSFSPDGR VSLVCRSVLHHFHFKGSVHSVSFSPDGRKF FKGSVHSVSFSPDGRKFVVTKGNIAQMYHA K G S G R K 0 1 0 1 0 0 0 2 1 0 0 0 0 1 1 4 0 0 0 2 0 0 13 0 1330.6266 A0A0B4J2E5;Q15269 A0A0B4J2E5 97 109 PWP2 Periodic tryptophan protein 2 homolog yes no 3 0.025381 20.806 1 0.98153 1.331 NaN 1 Median NaN NaN NaN 0 0 Median 0.98153 1.331 NaN 1 0 Median 35973000 17808000 18164000 0 0 0 35973000 17808000 18164000 1035 238 1117 1641 2652 2652 1 GSVTCLTQAR ______________________________ ______________________________ M G S A R M 1 1 0 0 1 1 0 1 0 0 1 0 0 0 0 1 2 0 0 1 0 0 10 0 1091.5393 L8E7G6 L8E7G6 2 11 ACCN1 yes yes 2 0.0052031 44.349 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 17245000 17245000 0 0 0 0 17245000 17245000 0 1036 689 1118 1642 2653 2653 1 GTDTQTPAVLSPSK SSKKVAFLRQNAPPKGTDTQTPAVLSPSKT KGTDTQTPAVLSPSKTQATLKPKDHHQPLG K G T S K T 1 0 0 1 0 1 0 1 0 0 1 1 0 0 2 2 3 0 0 1 0 0 14 0 1400.7147 P46087 P46087 722 735 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 2 0 225.29 1 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1037 763 1119 1643;1644;1645;1646 2654;2655;2656;2657;2658;2659;2660;2661;2662;2663;2664;2665;2666;2667 2659 1232;1982 0 GTEASSGTEAATGLEGEEK KTEIMSPLYQDEAPKGTEASSGTEAATGLE SSGTEAATGLEGEEKDGISDSDSSTSSEEE K G T E K D 3 0 0 0 0 0 5 4 0 0 1 1 0 0 0 2 3 0 0 0 0 0 19 0 1822.8068 B4DKU3;Q8IY81 B4DKU3 473 491 FTSJ3 pre-rRNA processing protein FTSJ3 yes no 2 3.4796E-14 96.734 2 2 0.59259 0.73934 32.624 2 Median 0.75927 0.93117 NaN 1 0 Median 0.46251 0.58702 NaN 1 0 Median 13377000 8236400 5141000 5547800 3489200 2058600 7829600 4747200 3082400 1038 474 1120;1121 1647;1648;1649;1650 2668;2669;2670;2671;2672;2673 2671 681;682 1 GTEPSPGGTPQPSRPVSPAGPPEGVPEEAQPPR ENSNQSFHSEGSLQKGTEPSPGGTPQPSRP AGPPEGVPEEAQPPRLGQERDPGGITAGST K G T P R L 2 2 0 0 0 2 4 5 0 0 0 0 0 0 11 3 2 0 0 2 0 0 33 1 3258.5905 I3L1Q2;Q8WUZ0 I3L1Q2 110 142 BCL7C B-cell CLL/lymphoma 7 protein family member C yes no 3 2.7666E-33 64.72 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1039 676 1122 1651 2674 2674 1002;1003 0 GTEPSTDGETSEAESNYSVSEHHDTILR KARKRKSRTTGSLPKGTEPSTDGETSEAES ESNYSVSEHHDTILRVTRRRQILIACSPVS K G T L R V 1 1 1 2 0 0 5 2 2 1 1 0 0 0 1 5 4 0 1 1 0 0 28 0 3047.3228 J3KP30;B7Z854;Q5QJE6;E9PRB3 J3KP30 78 105 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 yes no 4 1.4936E-10 46.695 1 1 0.78372 1.0055 14.334 2 Median 0.90698 1.1127 NaN 1 0 Median 0.67722 0.90855 NaN 1 0 Median 97074000 47846000 49228000 88400000 44211000 44189000 8673900 3635100 5038800 1040 545 1123 1652;1653 2675;2676;2677 2676 2 GTERGRRGRGRGR ENGLDGTKSGGPSGRGTERGRRGRGRGRGG GRGTERGRRGRGRGRGGSGRRGGRFSAQGM R G T G R G 0 6 0 0 0 0 1 5 0 0 0 0 0 0 0 0 1 0 0 0 0 0 13 5 1469.8148 B4DZJ6;B4DYY5;F8W726;Q14157;Q5VU81;Q5VU80;Q5VU79;Q5VU78;Q5VU77 B4DZJ6 83 95 UBAP2L Ubiquitin-associated protein 2-like yes no 3 0.029647 12.42 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 7286900 0 7286900 7286900 0 7286900 0 0 0 1041 509 1124 1654 2678 2678 1 GTGSADSIATLPK LSSIKVNVTTLQDGKGTGSADSIATLPKGF GKGTGSADSIATLPKGFGSVEELCTNSSLG K G T P K G 2 0 0 1 0 0 0 2 0 1 1 1 0 0 1 2 2 0 0 0 0 0 13 0 1216.6299 B5MDQ0;Q2NKX8 B5MDQ0 681 693 ERCC6L DNA excision repair protein ERCC-6-like yes no 2 1.5918E-05 86.467 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1042 535 1125 1655;1656 2679;2680;2681;2682;2683 2681 771 0 GTHQLYSTSHDR FTGHRDAVSGLAFRRGTHQLYSTSHDRSVK FRRGTHQLYSTSHDRSVKVWNVAENSYVET R G T D R S 0 1 0 1 0 1 0 1 2 0 1 0 0 0 0 2 2 0 1 0 0 0 12 0 1400.6433 O43818 O43818 252 263 RRP9 U3 small nucleolar RNA-interacting protein 2 yes yes 3 0.0063034 35.054 1 0.92006 1.1706 NaN 1 Median 0.92006 1.1706 NaN 1 0 Median NaN NaN NaN 0 0 Median 12246000 6156400 6089700 12246000 6156400 6089700 0 0 0 1043 703 1126 1657 2684 2684 1 GTNTSSPYDAGADYLR IGSPPVTSSQVMLSKGTNTSSPYDAGADYL TNTSSPYDAGADYLRACPKCNVQFNLLDPL K G T L R A 2 1 1 2 0 0 0 2 0 0 1 0 0 0 1 2 2 0 2 0 0 0 16 0 1686.7485 Q8ND82;Q9UJJ2 Q8ND82 222 237 ZNF280C Zinc finger protein 280C yes no 2 3.4632E-09 92.211 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1044 887 1127;1128 1658;1659;1660 2685;2686;2687;2688;2689 2688 1490;1491;2020;2021 0 GTPPLTPSDSPQTR PRGTPPPVFTPPLPKGTPPLTPSDSPQTRT KGTPPLTPSDSPQTRTASGAVDEDALTLEE K G T T R T 0 1 0 1 0 1 0 1 0 0 1 0 0 0 4 2 3 0 0 0 0 0 14 0 1452.7209 A8K559;Q6NZY4 A8K559 253 266 ZCCHC8 Zinc finger CCHC domain-containing protein 8 yes no 2 0.00051029 50.305 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1045 361 1129 1661 2690 2690 555;1855 0 GTQEFSPLCLR PRGSPCSPTPRKPCRGTQEFSPLCLRALAF KPCRGTQEFSPLCLRALAFCALAKPRASSL R G T L R A 0 1 0 0 1 1 1 1 0 0 2 0 0 1 1 1 1 0 0 0 0 0 11 0 1306.634 A6NHQ4 A6NHQ4 31 41 C17orf96 Uncharacterized protein C17orf96 yes yes 2 8.685E-14 111.52 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1046 327 1130 1662 2691;2692 2692 499 0 GTVIEVNVSELGLVTQGGK NPSSPLYTTLGVITKGTVIEVNVSELGLVT EVNVSELGLVTQGGKVIWGKYAQVTNNPEN K G T G K V 0 0 1 0 0 1 2 4 0 1 2 1 0 0 0 1 2 0 0 4 0 0 19 0 1899.0313 Q5J7U2;O95478 Q5J7U2 217 235 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog yes no 2 8.9534E-05 41.838 1 0.61384 0.77079 NaN 1 Median NaN NaN NaN 0 0 Median 0.61384 0.77079 NaN 1 0 Median 20223000 11992000 8231300 0 0 0 20223000 11992000 8231300 1047 720 1131 1663 2693 2693 1 GTVSFHSHSDHR SAQRNHAIRIKKLPKGTVSFHSHSDHRFLG LPKGTVSFHSHSDHRFLGTVEKEATFSNPK K G T H R F 0 1 0 1 0 0 0 1 3 0 0 0 0 1 0 3 1 0 0 1 0 0 12 0 1365.6174 E9PLT0;Q96L66;Q9GZV0;A0A024R0K2;A0A024R0E2;O75534 E9PLT0 286 297 CSDE1;UNR Cold shock domain-containing protein E1 yes no 3 0.0028925 43.991 1 0.4636 0.57819 NaN 1 Median 0.4636 0.57819 NaN 1 0 Median NaN NaN NaN 0 0 Median 31353000 20349000 11004000 31353000 20349000 11004000 0 0 0 1048 13 1132 1664 2694;2695 2694 2 GVEICIATPGR YGGAPKGPQIRDLERGVEICIATPGRLIDF DLERGVEICIATPGRLIDFLESGKTNLRRC R G V G R L 1 1 0 0 1 0 1 2 0 2 0 0 0 0 1 0 1 0 0 1 0 0 11 0 1171.6019 Q59F66;Q92841;J3QSF1;J3KRZ1;Q7Z2V5;B4DZQ7;Q59E92;B4DNG2;B4DN41;J3KTA4;B5BUE6;P17844 Q59F66 296 306 DDX17;DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX17;Probable ATP-dependent RNA helicase DDX5 yes no 2 0.00078055 68.676 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1049 840 1133 1665 2696 2696 2004 0 GVGASGSFR SIKRLVTTGVLKQTKGVGASGSFRLAKSDE VLKQTKGVGASGSFRLAKSDEPKKSVAFKK K G V F R L 1 1 0 0 0 0 0 3 0 0 0 0 0 1 0 2 0 0 0 1 0 0 9 0 836.41407 P07305 P07305 86 94 H1F0 Histone H1.0;Histone H1.0, N-terminally processed yes yes 2 0.0011712 71.501 1 0.49966 0.66902 NaN 1 Median NaN NaN NaN 0 0 Median 0.49966 0.66902 NaN 1 0 Median 9598600 6274600 3324100 0 0 0 9598600 6274600 3324100 1050 729 1134 1666 2697;2698 2698 2 GVGSGPHPPDTQQPSPSK LTPTRGTSSRVAVQRGVGSGPHPPDTQQPS SGPHPPDTQQPSPSKAFKPRFPGDQVVNGA R G V S K A 0 0 0 1 0 2 0 3 1 0 0 1 0 0 5 3 1 0 0 1 0 0 18 0 1771.8489 Q8NDL6;E9PCX8;Q59GW4;Q68CZ2 Q8NDL6 86 103 DKFZp434I2435;TNS3 Tensin-3 yes no 2 2.3431E-06 55.864 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1051 613 1135 1667 2699 2699 927 0 GVLHTFSPSPK QASSQLSRGSATTPRGVLHTFSPSPKLQNS TTPRGVLHTFSPSPKLQNSASATALVSRTG R G V P K L 0 0 0 0 0 0 0 1 1 0 1 1 0 1 2 2 1 0 0 1 0 0 11 0 1168.6241 A0A024R7K7;A0A024R7M6;Q86YP4;B4E0Q6;B4DKZ7 A0A024R7K7 540 550 GATAD2A Transcriptional repressor p66-alpha yes no 2 3.5689E-39 130.77 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1052 93 1136;1137 1668;1669;1670;1671 2700;2701;2702;2703;2704;2705;2706;2707 2701 129;130 0 GVNTFSPEGR ______________________________ SEYDRGVNTFSPEGRLFQVEYAIEAIKLAS R G V G R L 0 1 1 0 0 0 1 2 0 0 0 0 0 1 1 1 1 0 0 1 0 0 10 0 1062.5094 Q5U0A0;A0A109NGN6;P28066 Q5U0A0 11 20 PSMA5 Proteasome subunit alpha type;Proteasome subunit alpha type-5 yes no 2 0.0003065 73.781 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1053 277 1138 1672;1673 2708;2709;2710 2709 390 0 GVQVPASPDTVPQPSLR SYYLFADTWREEWEKGVQVPASPDTVPQPS QVPASPDTVPQPSLRIIAEEVKDVLFIRPR K G V L R I 1 1 0 1 0 2 0 1 0 0 1 0 0 0 4 2 1 0 0 3 0 0 17 0 1746.9264 A8K5A5;A0A024R1A2;Q92613;F2Z2B6;F2Z3N8 A8K5A5 79 95 PHF16;JADE3 Protein Jade-3 yes no 2 3.5881E-08 80.534 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1054 28 1139 1674;1675 2711;2712;2713 2712 24 0 GVQVPVSPGTIPQPVAR EYYVLADPWRQEWEKGVQVPVSPGTIPQPV QVPVSPGTIPQPVARVVSEEKSLMFIRPKK K G V A R V 1 1 0 0 0 2 0 2 0 1 0 0 0 0 4 1 1 0 0 4 0 0 17 0 1700.9574 D6RCS1;D6RC05;D6RBB3;D6RFK0;D6RGE7;B4DM93;Q6IE81 D6RCS1 83 99 JADE1 Protein Jade-1 yes no 2 7.2922E-05 44.196 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1055 481 1140 1676 2714 2714 698 0 GVSFTFGAEVVAK SDPDKDVLGWGENDRGVSFTFGAEVVAKFL DRGVSFTFGAEVVAKFLHKHDLDLICRAHQ R G V A K F 2 0 0 0 0 0 1 2 0 0 0 1 0 2 0 1 1 0 0 3 0 0 13 0 1310.6871 A0A024RBP2;F8W0W8;P36873;Q9UPN1;F8VYE8;B4DNE3;F8VR82;E9PMD7;A0A140VJS9;B3KXM2;P62136 A0A024RBP2 222 234 PPP1CC;PPP1CA Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit no no 2 0.013358 42.788 1 0.74336 0.98296 NaN 1 Median NaN NaN NaN 0 0 Median 0.74336 0.98296 NaN 1 0 Median 13207000 7823900 5383200 0 0 0 13207000 7823900 5383200 1056 148;280 1141 1677 2715 2715 1 GVTIASGGVLPNIHPELLAK LLAVANDEELNQLLKGVTIASGGVLPNIHP SGGVLPNIHPELLAKKRGSKGKLEAIITPP K G V A K K 2 0 1 0 0 0 1 3 1 2 3 1 0 0 2 1 1 0 0 2 0 0 20 0 1985.131 O75367;D6RCF2 O75367 97 116 H2AFY Core histone macro-H2A.1;Histone H2A yes no 3 0.0044138 36.481 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 5867100 5867100 0 0 0 0 5867100 5867100 0 1057 709 1142 1678 2716 2716 1 GYAFVEFESEDVAK TRFRLSRSKRTGNSKGYAFVEFESEDVAKI KGYAFVEFESEDVAKIVAETMNNYLFGERL K G Y A K I 2 0 0 1 0 0 3 1 0 0 0 1 0 2 0 1 0 0 1 2 0 0 14 0 1589.725 Q9BYG3;B4DSM4;C9J6C5 Q9BYG3 87 100 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein yes no 2 0.00038817 66.267 1 1 0.75856 0.94064 28.744 2 Median 0.92737 1.1526 NaN 1 0 Median 0.62048 0.76763 NaN 1 0 Median 42297000 22802000 19496000 19891000 9698900 10193000 22406000 13103000 9303300 1058 922 1143 1679;1680 2717;2718;2719;2720 2719 3 GYAFVQYSNER IFSKYGRVAGCSVHKGYAFVQYSNERHARA SVHKGYAFVQYSNERHARAAVLGENGRVLA K G Y E R H 1 1 1 0 0 1 1 1 0 0 0 0 0 1 0 1 0 0 2 1 0 0 11 0 1332.6099 Q5QPM1;Q5QPL9;A8K4T9;Q53GL6;Q9UKM9;Q5QPM2;B4DSJ1 Q5QPM1 56 66 RALY RNA-binding protein Raly yes no 2 1.4487E-05 96.64 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1059 355 1144 1681 2721 2721 546 0 GYEEVHVPALKPK KRCQLPDGSFRRQRKGYEEVHVPALKPKPF RKGYEEVHVPALKPKPFGSEEQLLPVEKLP K G Y P K P 1 0 0 0 0 0 2 1 1 0 1 2 0 0 2 0 0 0 1 2 0 0 13 1 1465.7929 A4FU77;O75643;Q9H8B9 A4FU77 192 204 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 3 0.0080771 30.059 1 1.125 1.3438 NaN 1 Median NaN NaN NaN 0 0 Median 1.125 1.3438 NaN 1 0 Median 4349600 2182800 2166800 0 0 0 4349600 2182800 2166800 1060 316 1145 1682 2722 2722 1 GYFEYIEENK DKKRGVKRPREDHGRGYFEYIEENKYSRAK EDHGRGYFEYIEENKYSRAKSPQPPVEEED R G Y N K Y 0 0 1 0 0 0 3 1 0 1 0 1 0 1 0 0 0 0 2 0 0 0 10 0 1290.5768 Q96BA7;B3KX72;Q00839;B4DLR3;Q5RI18 Q96BA7 153 162 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes no 2 0.0067347 56.432 1 1 3.6883 4.608 NaN 1 Median NaN NaN NaN 0 0 Median 3.6883 4.608 NaN 1 0 Median 12131000 5635900 6495300 2203800 2203800 0 9927300 3432000 6495300 1061 453 1146 1683;1684 2723;2724 2723 2 GYGFVHFETQEAAER NILSCKVVCDENGSKGYGFVHFETQEAAER GYGFVHFETQEAAERAIEKMNGMLLNDRKV K G Y E R A 2 1 0 0 0 1 3 2 1 0 0 0 0 2 0 0 1 0 1 1 0 0 15 0 1739.7903 A0A024R9E2;A0A087WTT1;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;B3KT93;A0A024R9C1;P11940;E5RGH3;H0YBN4;H0YAR2 A0A024R9E2 139 153 PABPC1 Polyadenylate-binding protein;Polyadenylate-binding protein 1 yes no 3 0.013694 22.606 1 0.40054 0.50599 NaN 1 Median 0.40054 0.50599 NaN 1 0 Median NaN NaN NaN 0 0 Median 4280300 2544300 1736000 4280300 2544300 1736000 0 0 0 1062 113 1147 1685 2725 2725 1 GYSFTTTAER GRDLTDYLMKILTERGYSFTTTAEREIVRD ILTERGYSFTTTAEREIVRDIKEKLCYVAL R G Y E R E 1 1 0 0 0 0 1 1 0 0 0 0 0 1 0 1 3 0 1 0 0 0 10 0 1131.5197 P63261;B4E3A4;Q8WVW5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4DVQ0;B4E335;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;I3L3I0;I3L1U9;V9HVZ7;I3L4N8 P63261 197 206 ACTG1;PS1TP5BP1;ACTB;HEL-176 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes no 2 1.2429E-25 110.87 1 1 3.0269 4.3149 NaN 1 Median NaN NaN NaN 0 0 Median 3.0269 4.3149 NaN 1 0 Median 162340000 54540000 107800000 18772000 18772000 0 143570000 35768000 107800000 1063 794 1148 1686;1687 2726;2727;2728 2726 3 GYVGSIQPHGVFFR EINSIQDIKEGQLLRGYVGSIQPHGVFFRL RGYVGSIQPHGVFFRLGPSVVGLARYSHVS R G Y F R L 0 1 0 0 0 1 0 3 1 1 0 0 0 2 1 1 0 0 1 2 0 0 14 0 1562.7994 Q14690 Q14690 1329 1342 PDCD11 Protein RRP5 homolog yes yes 3 0.00095104 46.069 1 0.68824 0.80817 NaN 1 Median NaN NaN NaN 0 0 Median 0.68824 0.80817 NaN 1 0 Median 3090700 1692300 1398400 0 0 0 3090700 1692300 1398400 1064 816 1149 1688 2729;2730;2731 2729 3 GYYSPGIVSTR VKPAQASHTNYLLMRGYYSPGIVSTRNLNP LLMRGYYSPGIVSTRNLNPNDSIVVNSCQM R G Y T R N 0 1 0 0 0 0 0 2 0 1 0 0 0 0 1 2 1 0 2 1 0 0 11 0 1198.5982 Q6AHZ7;Q6AWA4;Q12789 Q6AHZ7 1650 1660 DKFZp686A111;DKFZp686O0870;GTF3C1 General transcription factor 3C polypeptide 1 yes no 2 9.7815E-06 97.463 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1065 805 1150 1689;1690 2732;2733;2734;2735 2734 1320 0 GYYSPYSVSGSGSTAGSR GTGLRLLEAAAQSTKGYYSPYSVSGSGSTA SPYSVSGSGSTAGSRTGSRTGSRAGSRRGS K G Y S R T 1 1 0 0 0 0 0 4 0 0 0 0 0 0 1 6 1 0 3 1 0 0 18 0 1781.7857 Q15149;D3DWL0;Q96IE3 Q15149 4610 4627 PLEC;PLEC1 Plectin yes no 2 3.2997E-81 150.28 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1066 822 1151 1691;1692 2736;2737;2738;2739 2737 1356 0 HAASTVQILGAEK ARLIAHAGSLLNLAKHAASTVQILGAEKAL AKHAASTVQILGAEKALFRALKSRRDTPKY K H A E K A 3 0 0 0 0 1 1 1 1 1 1 1 0 0 0 1 1 0 0 1 0 0 13 0 1323.7147 Q9Y2X3;B3KN82 Q9Y2X3 311 323 NOP58 Nucleolar protein 58 yes no 2 2.7777E-09 99.5 1 0.48159 0.59943 NaN 1 Median NaN NaN NaN 0 0 Median 0.48159 0.59943 NaN 1 0 Median 21486000 13988000 7498600 0 0 0 21486000 13988000 7498600 1067 964 1152 1693 2740;2741 2741 2 HAELSGSPLK VAINYAAIRAEYADRHAELSGSPLKSKSTR EYADRHAELSGSPLKSKSTRKPLACIIGYL R H A L K S 1 0 0 0 0 0 1 1 1 0 2 1 0 0 1 2 0 0 0 0 0 0 10 0 1037.5506 D6W5A2;E7EV10;Q9BTC8 D6W5A2 456 465 MTA3 Metastasis-associated protein MTA3 yes no 2 9.6295E-06 97.163 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1068 601 1153 1694;1695 2742;2743;2744 2742 897;898 0 HAIPIIK NIELTRYTRPTPVQKHAIPIIKEKRDLMAC TRPTPVQKHAIPIIKEKRDLMACAQTGSGK K H A I K E 1 0 0 0 0 0 0 0 1 3 0 1 0 0 1 0 0 0 0 0 0 0 7 0 790.50651 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;B4DLU5;A0A024R9A4;O15523;C9J8G5;C9J081;B4E3C4;B4E010 A0A0D9SFB3 209 215 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 2 0.02668 84.025 1 2.9198 3.8475 NaN 1 Median NaN NaN NaN 0 0 Median 2.9198 3.8475 NaN 1 0 Median 14864000 4720900 10143000 0 0 0 14864000 4720900 10143000 1069 249 1154 1696 2745 2745 1 HAQANGFSVVR KPGVRYRELGNIIQKHAQANGFSVVRSYCG IIQKHAQANGFSVVRSYCGHGIHKLFHTAP K H A V R S 2 1 1 0 0 1 0 1 1 0 0 0 0 1 0 1 0 0 0 2 0 0 11 0 1184.6051 H0Y955;Q5CZ91;P53582 H0Y955 63 73 METAP1;DKFZp781C0419 Methionine aminopeptidase 1 yes no 2 0.0069662 55.461 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 4546900 4546900 0 0 0 0 4546900 4546900 0 1070 652 1155 1697 2746 2746 1 HATAEEVEEEER KPKRNEIDAEPPAKRHATAEEVEEEERDRI AKRHATAEEVEEEERDRIPGPVCKGKWKNK R H A E R D 2 1 0 0 0 0 6 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 12 0 1427.6165 Q8TDN6;Q9NUW4;B4E0B8 Q8TDN6 33 44 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog yes no 2 0.024643 39.918 1 1.0981 1.4463 NaN 1 Median NaN NaN NaN 0 0 Median 1.0981 1.4463 NaN 1 0 Median 11720000 5506600 6213000 0 0 0 11720000 5506600 6213000 1071 890 1156 1698 2747 2747 1 HATGKKSPAKSPNPSTPR IGKKTPANEKVEIQKHATGKKSPAKSPNPS GKKSPAKSPNPSTPRGKKRKALPASETPKA K H A P R G 2 1 1 0 0 0 0 1 1 0 0 3 0 0 4 3 2 0 0 0 0 0 18 3 1859.9966 O76021;J3QSV6;A0PJ61;Q32Q62 O76021 386 403 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 4 8.022E-07 49.638 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1072 712 1157 1699 2748;2749 2749 1065;1066 0 HAVSEGTK IQTAVRLLLPGELAKHAVSEGTKAVTKYTS LPGELAKHAVSEGTKAVTKYTSSK______ K H A T K A 1 0 0 0 0 0 1 1 1 0 0 1 0 0 0 1 1 0 0 1 0 0 8 0 827.41373 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;A8K9J7;P57053;Q96A08;L0R4T3;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257 A0A024RCJ2 110 117 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS;HIST1H2BA;ABCF2;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B no no 2 0.021651 53.775 1 0.56506 0.71351 NaN 1 Median NaN NaN NaN 0 0 Median 0.56506 0.71351 NaN 1 0 Median 8274900 5052900 3222000 0 0 0 8274900 5052900 3222000 1073 10;158 1158 1700 2750 2750 1 HCGLSLSSTPPGK LHSTAIYADEEEFSKHCGLSLSSTPPGKEA SKHCGLSLSSTPPGKEAKRSSDTSGNEASE K H C G K E 0 0 0 0 1 0 0 2 1 0 2 1 0 0 2 3 1 0 0 0 0 0 13 0 1339.6554 D6R9S4;Q09GN1;A5D8X7;Q71F23;A8K8D2 D6R9S4 61 73 CENPU;MLF1IP Centromere protein U yes no 2 0.00070803 59.294 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1074 320 1159;1160 1701;1702 2751;2752 2751 478;479;480;1841 0 HDIPDLGTMSEAK FGPTAYFTLCNVVMRHDIPDLGTMSEAKPH MRHDIPDLGTMSEAKPHLITHGFSSRLGKR R H D A K P 1 0 0 2 0 0 1 1 1 1 1 1 1 0 1 1 1 0 0 0 0 0 13 0 1412.6606 B9A008;E7ENR5;B8ZZ47;H0Y714;Q96G21 B9A008 86 98 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4 yes no 2 0.00966 51.092 1 0.85832 1.0936 NaN 1 Median NaN NaN NaN 0 0 Median 0.85832 1.0936 NaN 1 0 Median 10846000 5253000 5593500 0 0 0 10846000 5253000 5593500 1075 550 1161 1703 2753 2753 104 1 HDLDLICR SFTFGAEVVAKFLHKHDLDLICRAHQVVED VAKFLHKHDLDLICRAHQVVEDGYEFFAKR K H D C R A 0 1 0 2 1 0 0 0 1 1 2 0 0 0 0 0 0 0 0 0 0 0 8 0 1040.5073 A0A024RBP2;F8W0W8;P36873;Q9UPN1;F8VYE8;B4DNE3;F8VR82;E9PMD7;A0A140VJS9;B3KXM2;P62136;B7ZB67;B4DJ75;V9HW04;P62140 A0A024RBP2 239 246 PPP1CC;PPP1CA;HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit no no 2 7.2843E-38 133.55 1 1 0.79299 1.0514 18.809 2 Median 0.94326 1.2009 NaN 1 0 Median 0.66665 0.92044 NaN 1 0 Median 61790000 38300000 23489000 6458400 3226100 3232200 55331000 35074000 20257000 1076 148;280;470 1162 1704;1705 2754;2755;2756;2757 2757 4 HDTPDPSPLR KDRHDTPDPSPRRARHDTPDPSPLRGARHD PRRARHDTPDPSPLRGARHDSDTSPPRRIR R H D L R G 0 1 0 2 0 0 0 0 1 0 1 0 0 0 3 1 1 0 0 0 0 0 10 0 1133.5465 A8K4Z6;Q9BRD0 A8K4Z6 157 166 BUD13 BUD13 homolog yes no 2 0.00034094 69.01 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1077 357 1163;1164 1706;1707;1708 2758;2759;2760;2761 2761 548;1853 0 HDYALLIK H D I K 1 0 0 1 0 0 0 0 1 1 2 1 0 0 0 0 0 0 1 0 0 0 8 0 971.54402 REV__B9A063 yes no 3 0.0038953 51.335 1 0.47774 0.60127 NaN 1 Median NaN NaN NaN 0 0 Median 0.47774 0.60127 NaN 1 0 Median 63138000 43073000 20065000 0 0 0 63138000 43073000 20065000 + 1078 978 1165 1709 2762;2763 2762 2 HECGAAFTSK SASVDAEKSMLSKLKHECGAAFTSKLEGMF LSKLKHECGAAFTSKLEGMFKDMELSKDIM K H E S K L 2 0 0 0 1 0 1 1 1 0 0 1 0 1 0 1 1 0 0 0 0 0 10 0 1106.4815 B4DKT2;B2RBV7;A0A0A0MR50;K4DI93;Q13619;Q13620 B4DKT2 160 169 CUL4A;CUL4B Cullin-4A;Cullin-4B yes no 2 0.010639 51.276 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3614900 3614900 0 0 0 0 3614900 3614900 0 1079 212 1166 1710 2764 2764 1 HEDFSGGIDFKGSSDDEEESR ELEERQNLKGKRDEKHEDFSGGIDFKGSSD GIDFKGSSDDEEESRLCNTVLITGPTGVGK K H E S R L 0 1 0 4 0 0 4 3 1 1 0 1 0 2 0 4 0 0 0 0 0 0 21 1 2341.9571 A0A075B754;Q96QE3 A0A075B754 1103 1123 ATAD5 ATPase family AAA domain-containing protein 5 yes no 3 9.1627E-28 74.905 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1080 177 1167 1711 2765 2765 238;239 0 HEEEFDLFMR DEVPDDETVNQMIARHEEEFDLFMRMDLDR QMIARHEEEFDLFMRMDLDRRREEARNPKR R H E M R M 0 1 0 1 0 0 3 0 1 0 1 0 1 2 0 0 0 0 0 0 0 0 10 0 1351.5867 A7E2E1;Q9HBD4;B9EGQ8;A0A0A0MT49;P51532;B4E0F1;B4DSI8;B3KNW7 A7E2E1 1309 1318 SMARCA4 Transcription activator BRG1 yes no 2 0.020548 44.98 1 1.1711 1.4923 NaN 1 Median NaN NaN NaN 0 0 Median 1.1711 1.4923 NaN 1 0 Median 4704800 2162200 2542600 0 0 0 4704800 2162200 2542600 1081 224 1168 1712 2766 2766 44 1 HEERQDEHGYISR LTVKTKDGVVEITGKHEERQDEHGYISRCF GKHEERQDEHGYISRCFTRKYTLPPGVDPT K H E S R C 0 2 0 1 0 1 3 1 2 1 0 0 0 0 0 1 0 0 1 0 0 0 13 1 1654.7448 B4DL87;V9HW43;P04792 B4DL87 89 101 HEL-S-102;HSPB1 Heat shock protein beta-1 yes no 4 3.4576E-05 67.997 1 0.34264 0.44717 NaN 1 Median 0.34264 0.44717 NaN 1 0 Median NaN NaN NaN 0 0 Median 37595000 27094000 10501000 37595000 27094000 10501000 0 0 0 1082 477 1169 1713 2767;2768 2767 2 HEISEMNR QQTAGRHGDDLRNTKHEISEMNRMIQRLRS DDLRNTKHEISEMNRMIQRLRSEIDNVKKQ K H E N R M 0 1 1 0 0 0 2 0 1 1 0 0 1 0 0 1 0 0 0 0 0 0 8 0 1014.4553 CON__P13647;P13647;B4E1T1;B4DL32;H0YI76;CON__Q5XQN5;CON__Q922U2 CON__Q5XQN5 385 392 KRT5 Keratin, type II cytoskeletal 5 no no 2 0.027372 48.756 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2140900 2140900 0 0 0 0 2140900 2140900 0 + 1083 584;580 1170 1714 2769 2769 116 1 HELSTEYIPDPER CIVKFYNNVQGLVPKHELSTEYIPDPERVF PKHELSTEYIPDPERVFYTGQVVKVVVLNC K H E E R V 0 1 0 1 0 0 3 0 1 1 1 0 0 0 2 1 1 0 1 0 0 0 13 0 1584.742 Q14690;B4DH82;B4DES7 Q14690 572 584 PDCD11 Protein RRP5 homolog yes no 2;3 0.0017175 39.266 2 0.75574 0.99614 1.9656 2 Median NaN NaN NaN 0 0 Median 0.75574 0.99614 1.9656 2 0 Median 23268000 12576000 10692000 0 0 0 23268000 12576000 10692000 1084 816 1171 1715;1716 2770;2771;2772;2773 2770 4 HELTEISNVDVETQSGK DIDISSPEFKIKIPRHELTEISNVDVETQS LTEISNVDVETQSGKTVIRLPSGSGAASPT R H E G K T 0 0 1 1 0 1 3 1 1 1 1 1 0 0 0 2 2 0 0 2 0 0 17 0 1884.9065 Q09666 Q09666 187 203 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 3 6.8311E-61 114.27 1 1 1.3628 1.7165 161.54 2 Median 0.43891 0.54774 NaN 1 0 Median 4.2311 5.3791 NaN 1 0 Median 22535000 12334000 10201000 14842000 10359000 4483100 7692400 1974900 5717500 1085 804 1172 1717;1718 2774;2775;2776;2777 2774 4 HFEELETIMDR LLVETQMKKLEIKLRHFEELETIMDREREA IKLRHFEELETIMDREREALEYQRQQLLAD R H F D R E 0 1 0 1 0 0 3 0 1 1 1 0 1 1 0 0 1 0 0 0 0 0 11 0 1418.65 Q58EY4;Q92922;B4DYQ1;B4DYF9;B4DF22;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2 B4DF22 825 835 SMARCC1;SMARCC2 SWI/SNF complex subunit SMARCC1;SWI/SNF complex subunit SMARCC2 no no 2 0.00078943 86.898 1 1.1266 1.447 NaN 1 Median NaN NaN NaN 0 0 Median 1.1266 1.447 NaN 1 0 Median 15398000 7693400 7704600 0 0 0 15398000 7693400 7704600 1086 137;839 1173 1719 2778;2779 2779 31 2 HFELGGDK PNCRSKRMLAIKRCKHFELGGDKKRKGQVI LAIKRCKHFELGGDKKRKGQVIQF______ K H F D K K 0 0 0 1 0 0 1 2 1 0 1 1 0 1 0 0 0 0 0 0 0 0 8 0 901.42938 B2R4V2;Q969Q0;R4GN19;H0Y5B4;H7BZ11;J3KQN4;P83881 B2R4V2 90 97 RPL36AL;RPL36A;RPL36A-HNRNPH2 60S ribosomal protein L36a-like;60S ribosomal protein L36a no no 2 2.4835E-72 127.56 4 7 0.45262 0.57062 21.776 6 Median NaN NaN NaN 0 0 Median 0.45262 0.57062 21.776 6 0 Median 420110000 254660000 165440000 39833000 0 39833000 380270000 254660000 125610000 1087 401;650 1174 1720;1721;1722;1723;1724;1725;1726;1727;1728;1729;1730 2780;2781;2782;2783;2784;2785;2786;2787;2788;2789;2790;2791;2792;2793;2794;2795;2796;2797;2798;2799;2800 2785 21 HFELGGDKK PNCRSKRMLAIKRCKHFELGGDKKRKGQVI AIKRCKHFELGGDKKRKGQVIQF_______ K H F K K R 0 0 0 1 0 0 1 2 1 0 1 2 0 1 0 0 0 0 0 0 0 0 9 1 1029.5243 B2R4V2;Q969Q0;R4GN19;H0Y5B4;H7BZ11;J3KQN4;P83881 B2R4V2 90 98 RPL36AL;RPL36A;RPL36A-HNRNPH2 60S ribosomal protein L36a-like;60S ribosomal protein L36a no no 2;3 5.624E-96 155.1 5 0.92523 1.0985 5.6418 3 Plateau 0.92523 1.0985 5.6418 3 0 Plateau NaN NaN NaN 0 0 Median 532380000 275420000 256950000 532380000 275420000 256950000 0 0 0 1088 401;650 1175 1731;1732;1733;1734;1735 2801;2802;2803;2804;2805;2806;2807;2808;2809;2810;2811;2812 2811 12 HFFLQGEK HICEYTQKSGVSRARHFFLQGEKQFLLFTE SGVSRARHFFLQGEKQFLLFTERFHFYKRY R H F E K Q 0 0 0 0 0 1 1 1 1 0 1 1 0 2 0 0 0 0 0 0 0 0 8 0 1004.508 A8K0P8;Q68CQ4;B3KVX2 A8K0P8 655 662 DIEXF Digestive organ expansion factor homolog yes no 2 3.3305E-13 113.41 1 0.46887 0.58489 NaN 1 Median NaN NaN NaN 0 0 Median 0.46887 0.58489 NaN 1 0 Median 9443200 6002400 3440900 0 0 0 9443200 6002400 3440900 1089 337 1176 1736 2813 2813 1 HFNAPSHIR FNPFVTSDRSKNRKRHFNAPSHIRRKIMSS SKNRKRHFNAPSHIRRKIMSSPLSKELRQK R H F I R R 1 1 1 0 0 0 0 0 2 1 0 0 0 1 1 1 0 0 0 0 0 0 9 0 1077.5468 Q6IBH6;P61254;J3KTJ8;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;A0A024RBF6;J3KSS0 Q6IBH6 18 26 RPL26;hCG_26523 60S ribosomal protein L26 yes no 3 4.9866E-06 66.692 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 7409100 7409100 0 7409100 7409100 0 0 0 0 1090 782 1177 1737 2814 2814 1 HFNAPSHVR FNPFVTSDRSKNRKRHFNAPSHVRRKIMSS SKNRKRHFNAPSHVRRKIMSSPLSKELRQK R H F V R R 1 1 1 0 0 0 0 0 2 0 0 0 0 1 1 1 0 0 0 1 0 0 9 0 1063.5312 Q9UNX3;E5RIT6;E5RHH1 Q9UNX3 18 26 RPL26L1 60S ribosomal protein L26-like 1 yes no 3 9.4765E-06 93.649 1 1.1508 1.4723 NaN 1 Median 1.1508 1.4723 NaN 1 0 Median NaN NaN NaN 0 0 Median 9706400 4949200 4757200 9706400 4949200 4757200 0 0 0 1091 959 1178 1738 2815 2815 1 HFSTEDGIFQGQR GETQMLVGCADRTVKHFSTEDGIFQGQRHC VKHFSTEDGIFQGQRHCPGGEGMFRGLAQA K H F Q R H 0 1 0 1 0 2 1 2 1 1 0 0 0 2 0 1 1 0 0 0 0 0 13 0 1520.7008 B4E018;E9PS41;Q6RFH5 B4E018 69 81 WDR74 WD repeat-containing protein 74 yes no 2;3 6.5375E-23 95.498 2 0.65106 0.85856 8.9718 2 Median NaN NaN NaN 0 0 Median 0.65106 0.85856 8.9718 2 0 Median 53863000 32942000 20921000 0 0 0 53863000 32942000 20921000 1092 515 1179 1739;1740 2816;2817 2817 2 HFVDSHHQK SHTIRDLKYTIENPRHFVDSHHQKPVNAII TIENPRHFVDSHHQKPVNAIIEHVRDGSVV R H F Q K P 0 0 0 1 0 1 0 0 3 0 0 1 0 1 0 1 0 0 0 1 0 0 9 0 1133.5366 B2R5U1;B4E299;B3KU67;A0A140VK49;Q59FF0;I6TRR8;Q7KZF4 B2R5U1 160 168 SND1 Staphylococcal nuclease domain-containing protein 1 yes no 3 0.0015544 48.423 1 0.43434 0.52802 NaN 1 Median 0.43434 0.52802 NaN 1 0 Median NaN NaN NaN 0 0 Median 10817000 7626900 3190400 10817000 7626900 3190400 0 0 0 1093 283 1180 1741 2818 2818 1 HFVLDECDK LALVRNRSFSLKNVKHFVLDECDKMLGQLD SLKNVKHFVLDECDKMLGQLDMRRDVQEIF K H F D K M 0 0 0 2 1 0 1 0 1 0 1 1 0 1 0 0 0 0 0 1 0 0 9 0 1161.5125 B4DX78;O00148;A0A0D9SEM9;K7EPJ3;K7EQN7;A0A024R7H0 B4DX78 234 242 DDX39A;DDX39 ATP-dependent RNA helicase DDX39A yes no 2 0.012723 49.715 1 2.0466 2.7285 NaN 1 Median NaN NaN NaN 0 0 Median 2.0466 2.7285 NaN 1 0 Median 5665100 1842100 3822900 0 0 0 5665100 1842100 3822900 1094 507 1181 1742 2819 2819 1 HGATHVFASK NLNKIGKDEMLQMIRHGATHVFASKESEIT LQMIRHGATHVFASKESEITDEDIDGILER R H G S K E 2 0 0 0 0 0 0 1 2 0 0 1 0 1 0 1 1 0 0 1 0 0 10 0 1053.5356 B7ZAX9;B4DZC0;O60264;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;D7EZH4 B7ZAX9 599 608 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 yes no 2;3 0.0016259 68.657 1 2 1.8857 2.369 24.489 2 Median 2.2688 2.8169 NaN 1 0 Median 1.5674 1.9923 NaN 1 0 Median 33870000 7000300 26870000 13742000 3841100 9900500 20128000 3159200 16969000 1095 510 1182 1743;1744;1745 2820;2821;2822 2821 3 HGDEIITSTTSNYETQTFSSK EQSQLTATQTRTVNKHGDEIITSTTSNYET TSTTSNYETQTFSSKTEWRVRAISAANLHL K H G S K T 0 0 1 1 0 1 2 1 1 2 0 1 0 1 0 4 5 0 1 0 0 0 21 0 2345.0659 Q6P2Q9;Q53GM6;B4DK16 Q6P2Q9 2050 2070 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 3 1.5757E-15 75.057 1 0.62404 0.74435 NaN 1 Median 0.62404 0.74435 NaN 1 0 Median NaN NaN NaN 0 0 Median 84244000 52126000 32119000 84244000 52126000 32119000 0 0 0 1096 860 1183 1746 2823;2824 2823 2 HGDVITIIDR TQVNGSVIDEPVRLKHGDVITIIDRSFRYE PVRLKHGDVITIIDRSFRYENESLQNGRKS K H G D R S 0 1 0 2 0 0 0 1 1 3 0 0 0 0 0 0 1 0 0 1 0 0 10 0 1137.6142 P46013 P46013 84 93 MKI67 Antigen KI-67 yes yes 2 3.566E-117 173.37 1 0.98415 1.3685 NaN 1 Median NaN NaN NaN 0 0 Median 0.98415 1.3685 NaN 1 0 Median 68338000 34996000 33342000 0 0 0 68338000 34996000 33342000 1097 762 1184 1747 2825;2826 2826 2 HGGGGGGFGGGGFGSR GGSRRSTSSFSCLSRHGGGGGGFGGGGFGS GGGGGGFGGGGFGSRSLVGLGGTKSISISV R H G S R S 0 1 0 0 0 0 0 11 1 0 0 0 0 2 0 1 0 0 0 0 0 0 16 0 1319.5755 CON__P35908;P35908 CON__P35908 46 61 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2;3 4.254E-06 54.683 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 25981000 25981000 0 0 0 0 25981000 25981000 0 + 1098 583 1185 1748;1749 2827;2828 2828 2 HGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGK ______________________________ GGSAAVAAATASGGKSGGGSCGGGGSYSAS K H G G K S 7 0 0 0 0 0 0 17 1 0 0 1 0 1 1 5 1 0 0 1 0 0 35 0 2629.1865 J3QQW9;A8K1U9;Q15022 J3QQW9 6 40 SUZ12 Polycomb protein SUZ12 yes no 3 2.1916E-60 111.73 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1099 342 1186 1750 2829 2829 520 0 HGLLVPNNTTDQELQHIR IAGCRIIGRMCVGNRHGLLVPNNTTDQELQ LVPNNTTDQELQHIRNSLPDTVQIRRVEER R H G I R N 0 1 2 1 0 2 1 1 2 1 3 0 0 0 1 0 2 0 0 1 0 0 18 0 2084.0763 P56537;B7ZBH1 P56537 68 85 EIF6 Eukaryotic translation initiation factor 6 yes no 3 2.183E-06 48.314 1 0.48339 0.64458 NaN 1 Median NaN NaN NaN 0 0 Median 0.48339 0.64458 NaN 1 0 Median 30089000 21750000 8338900 0 0 0 30089000 21750000 8338900 1100 781 1187 1751 2830 2830 1 HGLQLGAQSPGR TFSSRLILEKHVQVRHGLQLGAQSPGRGTT QVRHGLQLGAQSPGRGTTLARGSSARAQGP R H G G R G 1 1 0 0 0 2 0 3 1 0 2 0 0 0 1 1 0 0 0 0 0 0 12 0 1219.6422 Q8N1G0;A6PVV7 Q8N1G0 1049 1060 ZNF687 Zinc finger protein 687 yes no 2 5.3162E-13 87.498 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1101 879 1188 1752;1753 2831;2832 2831 1477 0 HGLYLPTR FMDTMLQMSILGSAKHGLYLPTRVTAIHID SILGSAKHGLYLPTRVTAIHIDPATHRQKL K H G T R V 0 1 0 0 0 0 0 1 1 0 2 0 0 0 1 0 1 0 1 0 0 0 8 0 955.52395 A0A0U1RQF0;P49327 A0A0U1RQF0 1044 1051 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 2 0.0063014 75.854 1 5.6946 7.3122 NaN 1 Median NaN NaN NaN 0 0 Median 5.6946 7.3122 NaN 1 0 Median 18574000 3199100 15375000 0 0 0 18574000 3199100 15375000 1102 273 1189 1754 2833 2833 1 HGRPGIGATHSSR GHYLGEFSITYKPVKHGRPGIGATHSSRFI VKHGRPGIGATHSSRFIPLK__________ K H G S R F 1 2 0 0 0 0 0 3 2 1 0 0 0 0 1 2 1 0 0 0 0 0 13 1 1331.6807 K7EM56;A0A0B4J2B4;S4R417;K7EQJ5;K7ELC2;P62841 K7EM56 95 107 RPS15 40S ribosomal protein S15 yes no 3;4 7.3923E-05 68.809 2 0.80057 1.0451 5.8758 2 Median 0.80057 1.0451 5.8758 2 0 Median NaN NaN NaN 0 0 Median 108490000 59888000 48603000 108490000 59888000 48603000 0 0 0 1103 237 1190 1755;1756 2834;2835;2836;2837 2836 4 HGSDPAFAPGPR QRLDYVPSSASREVRHGSDPAFAPGPRGLE EVRHGSDPAFAPGPRGLEPSGAPRPNLTQR R H G P R G 2 1 0 1 0 0 0 2 1 0 0 0 0 1 3 1 0 0 0 0 0 0 12 0 1207.5734 J3KPS2;Q6ZRV2 J3KPS2 248 259 FAM83H Protein FAM83H yes no 2 1.1831E-41 108.56 4 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1104 679 1191 1757;1758;1759;1760 2838;2839;2840;2841 2841 1009 0 HGSFHEDEDPIGSPR ISEDSERTGGSPSVRHGSFHEDEDPIGSPR HGSFHEDEDPIGSPRLLSVKGSPKVDEKVL R H G P R L 0 1 0 2 0 0 2 2 2 1 0 0 0 1 2 2 0 0 0 0 0 0 15 0 1678.7336 Q96T58 Q96T58 1266 1280 SPEN Msx2-interacting protein yes yes 3 2.698E-07 71.601 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1105 911 1192 1761 2842 2842 1571 0 HGSLGFLPR ______________________________ KSSAPRHGSLGFLPRKRSSRHRGKVKSFPK R H G P R K 0 1 0 0 0 0 0 2 1 0 2 0 0 1 1 1 0 0 0 0 0 0 9 0 982.53485 B3KS36;P39023;H7C3M2;H7C422;Q96QL0;B4DN06;F8WCR1 B3KS36 11 19 RPL3 60S ribosomal protein L3 yes no 2 2.2504E-63 145.25 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1106 443 1193 1762;1763 2843;2844;2845;2846 2844 646 0 HGVQELEIELQSQLSK GQEVQSSAKEVTQLRHGVQELEIELQSQLS GVQELEIELQSQLSKKAALEKSLEDTKNRY R H G S K K 0 0 0 0 0 3 3 1 1 1 3 1 0 0 0 2 0 0 0 1 0 0 16 0 1836.9581 CON__P35527;P35527;K7EQQ3 CON__P35527 375 390 KRT9 Keratin, type I cytoskeletal 9 yes no 2;3 2.6972E-253 192.32 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 60106000 60106000 0 0 0 0 60106000 60106000 0 + 1107 582 1194 1764;1765;1766 2847;2848;2849 2849 3 HGVVPLATYMR KRRGTRYMFSRPFRKHGVVPLATYMRIYKK PFRKHGVVPLATYMRIYKKGDIVDIKGMGT K H G M R I 1 1 0 0 0 0 0 1 1 0 1 0 1 0 1 0 1 0 1 2 0 0 11 0 1242.6543 Q6IAX2;P46778;Q59GK9;M0R181;G3V1B3 Q6IAX2 22 32 RPL21 60S ribosomal protein L21 yes no 2 0.011846 55.064 1 0.50266 0.68875 NaN 1 Median NaN NaN NaN 0 0 Median 0.50266 0.68875 NaN 1 0 Median 44073000 28905000 15169000 0 0 0 44073000 28905000 15169000 1108 764 1195 1767 2850 2850 181 1 HHYEQQQEDLAR QEESVDPDYWEKLLRHHYEQQQEDLARNLG LLRHHYEQQQEDLARNLGKGKRIRKQVNYN R H H A R N 1 1 0 1 0 3 2 0 2 0 1 0 0 0 0 0 0 0 1 0 0 0 12 0 1552.7019 Q12873;B4DLC6;B3KRD4;B3KY63;F5GWX5;A0A0C4DGG9;Q14839;Q8TDI0;Q6ZU36;Q659F1;K7EMY3;Q659D0 B3KY63 1294 1305 CHD3;CHD4;CHD5;DKFZp434K213;DKFZp434P202 Chromodomain-helicase-DNA-binding protein 3;Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 5 no no 3 2.4013E-09 102.4 1 0.75437 0.93586 NaN 1 Median 0.75437 0.93586 NaN 1 0 Median NaN NaN NaN 0 0 Median 43744000 25735000 18009000 43744000 25735000 18009000 0 0 0 1109 244;806 1196 1768 2851;2852 2851 2 HIAGLNANR FVGVDINICSEVLLRHIAGLNANRAKNIIE SEVLLRHIAGLNANRAKNIIEWREKNGPFI R H I N R A 2 1 2 0 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 9 0 964.52026 B7ZAA7;B7Z6X7;B3KPM8;Q8N5C6 B7ZAA7 239 247 SRBD1 S1 RNA-binding domain-containing protein 1 yes no 2 0.017749 47.067 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2184600 2184600 0 0 0 0 2184600 2184600 0 1110 437 1197 1769 2853 2853 1 HIALSPR VNSRYSCLVAGPHQRHIALSPRYLNRKRTG LVAGPHQRHIALSPRYLNRKRTGIREQLDA R H I P R Y 1 1 0 0 0 0 0 0 1 1 1 0 0 0 1 1 0 0 0 0 0 0 7 0 792.46062 Q3B726 Q3B726 56 62 TWISTNB DNA-directed RNA polymerase I subunit RPA43 yes yes 2 0.0073885 58.981 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1111 831 1198 1770 2854 2854 1372 0 HIDFSLR VVNIPSFIVRLDSQKHIDFSLRSPYGGGRP IVRLDSQKHIDFSLRSPYGGGRPGRVKRKN K H I L R S 0 1 0 1 0 0 0 0 1 1 1 0 0 1 0 1 0 0 0 0 0 0 7 0 886.4661 A0A024R4M0;P46781;A5D904 A0A024R4M0 156 162 RPS9 40S ribosomal protein S9 yes no 2 7.6629E-18 120.52 2 0.51445 0.67522 2.4806 2 Median NaN NaN NaN 0 0 Median 0.51445 0.67522 2.4806 2 0 Median 50897000 33598000 17299000 0 0 0 50897000 33598000 17299000 1112 62 1199 1771;1772 2855;2856;2857;2858 2857 4 HIEVEVR PSKQLLSTIMKDSEKHIEVEVRKFLALKQT TIMKDSEKHIEVEVRKFLALKQTPDFHTVI K H I V R K 0 1 0 0 0 0 2 0 1 1 0 0 0 0 0 0 0 0 0 2 0 0 7 0 880.47667 J3QR28;Q9H8H0 J3QR28 217 223 NOL11 Nucleolar protein 11 yes no 2 0.0017295 94.006 1 0.65086 0.87424 NaN 1 Median NaN NaN NaN 0 0 Median 0.65086 0.87424 NaN 1 0 Median 32514000 20114000 12401000 0 0 0 32514000 20114000 12401000 1113 685 1200 1773 2859 2859 1 HIEVEVRK PSKQLLSTIMKDSEKHIEVEVRKFLALKQT IMKDSEKHIEVEVRKFLALKQTPDFHTVIG K H I R K F 0 1 0 0 0 0 2 0 1 1 0 1 0 0 0 0 0 0 0 2 0 0 8 1 1008.5716 J3QR28;Q9H8H0 J3QR28 217 224 NOL11 Nucleolar protein 11 yes no 3 0.0181 27.13 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1114 685 1201 1774 2860 2860 1 HIGYDDSSK RAAVDYQKVVREAVKHIGYDDSSKGFDYKT VREAVKHIGYDDSSKGFDYKTCNVLVALEQ K H I S K G 0 0 0 2 0 0 0 1 1 1 0 1 0 0 0 2 0 0 1 0 0 0 9 0 1020.4512 B4DEX8;A0A140VJP5;P31153 B4DEX8 89 97 MAT2A S-adenosylmethionine synthase;S-adenosylmethionine synthase isoform type-2 yes no 2 0.029505 43.185 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2966100 0 2966100 0 0 0 2966100 0 2966100 1115 279 1202 1775 2861 2861 1 HIKEEPLSEEEPCTSTAIASPEK EETSVKKKKKRGKKKHIKEEPLSEEEPCTS EEEPCTSTAIASPEKKKKKKKKRENED___ K H I E K K 2 0 0 0 1 0 6 0 1 2 1 2 0 0 3 3 2 0 0 0 0 0 23 1 2581.2218 Q9Y2X3;B3KN82 Q9Y2X3 495 517 NOP58 Nucleolar protein 58 yes no 3;4 3.4256E-107 157.15 4 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1116 964 1203;1204 1776;1777;1778;1779;1780 2862;2863;2864;2865;2866;2867;2868;2869;2870;2871;2872;2873;2874 2863 1746;1747;1748 0 HIKEEPLSEEEPCTSTAIASPEKK EETSVKKKKKRGKKKHIKEEPLSEEEPCTS EEPCTSTAIASPEKKKKKKKKRENED____ K H I K K K 2 0 0 0 1 0 6 0 1 2 1 3 0 0 3 3 2 0 0 0 0 0 24 2 2709.3167 Q9Y2X3;B3KN82 Q9Y2X3 495 518 NOP58 Nucleolar protein 58 yes no 3;4 2.4547E-17 61.958 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1117 964 1205 1781;1782 2875;2876 2875 1746;1747;1748 0 HILLAVANDEELNQLLK GNAARDNKKGRVTPRHILLAVANDEELNQL LLAVANDEELNQLLKGVTIASGGVLPNIHP R H I L K G 2 0 2 1 0 1 2 0 1 1 5 1 0 0 0 0 0 0 0 1 0 0 17 0 1932.068 O75367;D6RCF2;Q9HA11;A0A024QZP6;Q9P0M6 O75367 80 96 H2AFY;H2AFY2 Core histone macro-H2A.1;Histone H2A;Core histone macro-H2A;Core histone macro-H2A.2 yes no 2;3 2.8638E-175 154.6 4 0.71777 0.92535 7.7205 4 Median NaN NaN NaN 0 0 Median 0.71777 0.92535 7.7205 4 0 Median 48038000 27283000 20755000 0 0 0 48038000 27283000 20755000 1118 709 1206 1783;1784;1785;1786 2877;2878;2879;2880;2881;2882 2880 6 HIMGQNVADYMR YDSESKEFNAEVHRKHIMGQNVADYMRYLM HRKHIMGQNVADYMRYLMEEDEDAYKKQFS K H I M R Y 1 1 1 1 0 1 0 1 1 1 0 0 2 0 0 0 0 0 1 1 0 0 12 0 1433.6544 A2RUM7;Q59GX9;P46777;B3KTM6 A2RUM7 198 209 RPL5 60S ribosomal protein L5 yes no 2 0.0088461 44.863 1 0.49756 0.67124 NaN 1 Median NaN NaN NaN 0 0 Median 0.49756 0.67124 NaN 1 0 Median 34056000 22725000 11331000 0 0 0 34056000 22725000 11331000 1119 306 1207 1787 2883 2883 64;65 1 HITSEADSDPGNPVELCK TESSQTSISLESDLKHITSEADSDPGNPVE SEADSDPGNPVELCKTQKQSTTTLNKKDLP K H I C K T 1 0 1 2 1 0 2 1 1 1 1 1 0 0 2 2 1 0 0 1 0 0 18 0 1967.8895 B7Z7S9;Q562F6 B7Z7S9 1025 1042 SGOL2 Shugoshin-like 2 yes no 2;3 1.7138E-06 47.75 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1120 543 1208 1788;1789;1790 2884;2885;2886 2884 787;788;1898 0 HITVVHK PLCTYETRRKRDVIRHITVVHKKSSRYLGK RRKRDVIRHITVVHKKSSRYLGKITASLEI R H I H K K 0 0 0 0 0 0 0 0 2 1 0 1 0 0 0 0 1 0 0 2 0 0 7 0 832.49192 B7Z4V7;Q2TB10 B7Z4V7 440 446 ZNF800 Zinc finger protein 800 yes no 2 0.010419 81.381 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1373100 0 1373100 1373100 0 1373100 0 0 0 1121 539 1209 1791 2887 2887 1 HLAESESLLTSPPK FSVYFRREGVMHQVKHLAESESLLTSPPKA KHLAESESLLTSPPKACTNGSGSMGSTTSV K H L P K A 1 0 0 0 0 0 2 0 1 0 3 1 0 0 2 3 1 0 0 0 0 0 14 0 1507.7882 Q14669 Q14669 932 945 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes yes 2 1.6623E-10 102.9 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1122 814 1210 1792;1793 2888;2889;2890;2891 2888 1335;1996 0 HLAFGGR RQFGPYRLNYSRTGRHLAFGGRRGHVAALD LNYSRTGRHLAFGGRRGHVAALDWVTKKLM R H L G R R 1 1 0 0 0 0 0 2 1 0 1 0 0 1 0 0 0 0 0 0 0 0 7 0 756.40311 B4DP15;B4DNI0;B0UZZ8;A8K806;O15213;A8K9A1;H0Y6G3;A0A140T9L0;A0A0G2JJL1 B4DP15 155 161 C6orf11;WDR46 WD repeat-containing protein 46 yes no 2 0.0050137 56.095 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3221800 3221800 0 0 0 0 3221800 3221800 0 1123 372 1211 1794 2892 2892 1 HLCFGR WELKCTFCQRAGKIRHLCFGRLTCSKYLLG FCQRAGKIRHLCFGRLTCSKYLLGATENGI R H L G R L 0 1 0 0 1 0 0 1 1 0 1 0 0 1 0 0 0 0 0 0 0 0 6 0 788.37518 A8K330;Q8IWA0 A8K330 544 549 WDR75 WD repeat-containing protein 75 yes no 2 0.013174 54.895 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3269300 3269300 0 0 0 0 3269300 3269300 0 1124 347 1212 1795 2893 2893 1 HLDDINFDVR KYITDVVKLNAFDQRHLDDINFDVRFETFQ AFDQRHLDDINFDVRFETFQTITSYIKEMQ R H L V R F 0 1 1 3 0 0 0 0 1 1 1 0 0 1 0 0 0 0 0 1 0 0 10 0 1242.5993 O75691 O75691 1440 1449 UTP20 Small subunit processome component 20 homolog yes yes 2 0.024439 41.876 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2929600 0 2929600 0 0 0 2929600 0 2929600 1125 711 1213 1796 2894 2894 1 HLDDLSK TLLPVIQFLQKSIQRHLDDLSKLCSWNHYN FLQKSIQRHLDDLSKLCSWNHYNMQYALAV R H L S K L 0 0 0 2 0 0 0 0 1 0 2 1 0 0 0 1 0 0 0 0 0 0 7 0 826.41848 A0A0B4J2E5;Q15269;A0A096LPI6 A0A0B4J2E5 855 861 PWP2 Periodic tryptophan protein 2 homolog yes no 2 6.8395E-18 120.62 1 0.68698 0.8511 NaN 1 Median NaN NaN NaN 0 0 Median 0.68698 0.8511 NaN 1 0 Median 22191000 12802000 9388700 0 0 0 22191000 12802000 9388700 1126 238 1214 1797 2895;2896 2896 2 HLELYDR MKQRDDILINRPAKKHLELYDRDLKHFRIS LINRPAKKHLELYDRDLKHFRISKALDRVL K H L D R D 0 1 0 1 0 0 1 0 1 0 2 0 0 0 0 0 0 0 1 0 0 0 7 0 944.47158 H0Y8P4;Q8TED0 H0Y8P4 387 393 UTP15 U3 small nucleolar RNA-associated protein 15 homolog yes no 2 0.00025489 98.418 1 0.64348 0.87973 NaN 1 Median NaN NaN NaN 0 0 Median 0.64348 0.87973 NaN 1 0 Median 41224000 24251000 16973000 0 0 0 41224000 24251000 16973000 1127 651 1215 1798 2897;2898 2898 2 HLFGQPNSAYDFK VSKMLKDYDWINAERHLFGQPNSAYDFKTN ERHLFGQPNSAYDFKTNNPKEAGQRLQKLQ R H L F K T 1 0 1 1 0 1 0 1 1 0 1 1 0 2 1 1 0 0 1 0 0 0 13 0 1522.7205 B7ZLZ7;A0A024R158;O95347;B3KMB1;B3KM27;A0A0C4DGE5 B7ZLZ7 946 958 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 yes no 2;3 0.00029737 68.536 2 0.62047 0.76679 NaN 1 Median NaN NaN NaN 0 0 Median 0.62047 0.76679 NaN 1 0 Median 25362000 15684000 9678000 0 0 0 25362000 15684000 9678000 1128 27 1216 1799;1800 2899;2900;2901 2899 3 HLGLLEK RQREHRERSQPGFRKHLGLLEKKKDYKLRA RSQPGFRKHLGLLEKKKDYKLRADDYRKKQ K H L E K K 0 0 0 0 0 0 1 1 1 0 3 1 0 0 0 0 0 0 0 0 0 0 7 0 808.48069 Q9Y3A2 Q9Y3A2 27 33 UTP11L Probable U3 small nucleolar RNA-associated protein 11 yes yes 2 7.5633E-11 108.98 1 0.65743 0.86905 NaN 1 Median NaN NaN NaN 0 0 Median 0.65743 0.86905 NaN 1 0 Median 13359000 7882400 5476100 0 0 0 13359000 7882400 5476100 1129 965 1217 1801 2902 2902 1 HLLTLK NKLSVVDQKLSSEIRHLLTLKDDAVKKELI DQKLSSEIRHLLTLKDDAVKKELIPKAKST R H L L K D 0 0 0 0 0 0 0 0 1 0 3 1 0 0 0 0 1 0 0 0 0 0 6 0 723.46431 Q9NQZ2 Q9NQZ2 324 329 UTP3 Something about silencing protein 10 yes yes 2 0.021438 80.555 1 0.6598 0.84769 NaN 1 Median NaN NaN NaN 0 0 Median 0.6598 0.84769 NaN 1 0 Median 7202900 4355100 2847800 0 0 0 7202900 4355100 2847800 1130 933 1218 1802 2903 2903 1 HLMQDLR RILIFSSRGINFRTRHLMQDLRMLMPHSKA RGINFRTRHLMQDLRMLMPHSKADTKMDRK R H L L R M 0 1 0 1 0 1 0 0 1 0 2 0 1 0 0 0 0 0 0 0 0 0 7 0 911.46472 Q8TDN6;Q9NUW4;B4E0B8;A0JLQ5 Q8TDN6 76 82 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog yes no 2 9.8088E-06 92.491 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 19545000 19545000 0 0 0 0 19545000 19545000 0 1131 890 1219 1803 2904 2904 204 1 HLNDLLEDR GNEIEVMVSTEEAKRHLNDLLEDRKILAQD TEEAKRHLNDLLEDRKILAQDVAQLKEKKE R H L D R K 0 1 1 2 0 0 1 0 1 0 3 0 0 0 0 0 0 0 0 0 0 0 9 0 1123.5622 Q59HG1;O95239;B3KNC0;B4DYE2;Q2VIQ3;Q6PKB2 Q59HG1 766 774 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B yes no 2 0.00099025 78.556 1 0.53065 0.68457 NaN 1 Median NaN NaN NaN 0 0 Median 0.53065 0.68457 NaN 1 0 Median 14638000 8870200 5767800 0 0 0 14638000 8870200 5767800 1132 717 1220 1804 2905;2906 2906 2 HLPGHPYVR CMVKTEQCLVALLHKHLPGHPYVRRKRKKF VALLHKHLPGHPYVRRKRKKFPDRLAEDEG K H L V R R 0 1 0 0 0 0 0 1 2 0 1 0 0 0 2 0 0 0 1 1 0 0 9 0 1074.5723 Q9UIG0 Q9UIG0 1443 1451 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 3 0.0037756 59.245 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 4665500 0 4665500 0 0 0 4665500 0 4665500 1133 952 1221 1805 2907 2907 1 HLPPQLR GGVNQYVVQEVLSIKHLPPQLRAFQAAFRA VQEVLSIKHLPPQLRAFQAAFRAQGPLAML K H L L R A 0 1 0 0 0 1 0 0 1 0 2 0 0 0 2 0 0 0 0 0 0 0 7 0 859.50282 Q15021;B3KY03;B3KMS0;E7EN77;Q6ZV00;A0PJ76;F5GZK7;F5H431 Q15021 36 42 NCAPD2 Condensin complex subunit 1 yes no 2 0.029716 64.563 1 0.43636 0.579 NaN 1 Median NaN NaN NaN 0 0 Median 0.43636 0.579 NaN 1 0 Median 28553000 19885000 8668900 0 0 0 28553000 19885000 8668900 1134 820 1222 1806 2908 2908 1 HLPSTEPDPHVVR RVCFEMKINEEISVKHLPSTEPDPHVVRIG VKHLPSTEPDPHVVRIGWSLDSCSTQLGF_ K H L V R I 0 1 0 1 0 0 1 0 2 0 1 0 0 0 3 1 1 0 0 2 0 0 13 0 1482.7579 M0QYM5;M0QYI8;M0QYZ0;M0R3F1;A8K3W4;A0A024R0J9;A0A0A0MRA5;B7Z4B8;A8K6U7;A8K5K0;Q9BUJ2 M0QYM5 64 76 HNRNPUL1;HNRPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes no 3 0.0020162 44.511 1 1.1802 1.5847 NaN 1 Median NaN NaN NaN 0 0 Median 1.1802 1.5847 NaN 1 0 Median 8316800 3796300 4520500 0 0 0 8316800 3796300 4520500 1135 19 1223 1807 2909 2909 1 HLQDLMEGLTAK EDDLFDRLNTGILNKHLQDLMEGLTAKVFR LNKHLQDLMEGLTAKVFRTYNASITLQQQL K H L A K V 1 0 0 1 0 1 1 1 1 0 3 1 1 0 0 0 1 0 0 0 0 0 12 0 1354.6915 P11387;B9EG90 P11387 576 587 TOP1 DNA topoisomerase 1 yes no 2 0.001362 83.137 1 0.70202 0.86613 NaN 1 Median NaN NaN NaN 0 0 Median 0.70202 0.86613 NaN 1 0 Median 24128000 14187000 9941800 0 0 0 24128000 14187000 9941800 1136 733 1224 1808 2910;2911 2910 154 2 HLQLAIR GNAARDNKKTRIIPRHLQLAIRNDEELNKL KKTRIIPRHLQLAIRNDEELNKLLGKVTIA R H L I R N 1 1 0 0 0 1 0 0 1 1 2 0 0 0 0 0 0 0 0 0 0 0 7 0 849.51847 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;B2R5B6;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;Q96QV6;P16104;Q71UI9;P0C0S5;C9J0D1;C9J386 A3KPC7 83 89 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;HIST1H2AA;H2AFX;H2AFV;H2AFZ Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A type 1-A;Histone H2AX;Histone H2A.V;Histone H2A.Z no no 2 5.5078E-47 141.55 1 7 0.63442 0.83349 9.9662 5 Median 0.70943 0.86206 NaN 1 0 Median 0.63153 0.81809 11.505 4 0 Median 2172400000 1320600000 851770000 161670000 96359000 65309000 2010700000 1224200000 786460000 1137 132;732 1225 1809;1810;1811;1812;1813;1814;1815;1816 2912;2913;2914;2915;2916;2917;2918;2919;2920;2921;2922;2923;2924;2925;2926;2927;2928;2929;2930;2931 2912 19 HLQLAIRNDEELNK GNAARDNKKTRIIPRHLQLAIRNDEELNKL RHLQLAIRNDEELNKLLGKVTIAQGGVLPN R H L N K L 1 1 2 1 0 1 2 0 1 1 3 1 0 0 0 0 0 0 0 0 0 0 14 1 1691.8955 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;B2R5B6;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908;Q96QV6;P16104 A3KPC7 83 96 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A;HIST1H2AA;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A type 1-A;Histone H2AX yes no 2;3;4 2.6142E-103 162.88 5 4 0.70341 0.93191 13 7 Median 0.73776 0.93886 12.245 4 0 Median 0.60814 0.93191 16.228 3 0 Median 1654000000 991150000 662840000 491960000 274400000 217560000 1162000000 716750000 445280000 1138 132 1226 1817;1818;1819;1820;1821;1822;1823;1824;1825 2932;2933;2934;2935;2936;2937;2938;2939;2940;2941;2942;2943;2944;2945;2946;2947;2948;2949;2950;2951;2952;2953 2948 21 HLQLAVR GNAARDNKKTRIIPRHLQLAVRNDEELNKL KKTRIIPRHLQLAVRNDEELNKLLGGVTIA R H L V R N 1 1 0 0 0 1 0 0 1 0 2 0 0 0 0 0 0 0 0 1 0 0 7 0 835.50282 Q8IUE6;A2RUA4 Q8IUE6 83 89 HIST2H2AB Histone H2A type 2-B;Histone H2A yes no 2 5.6897E-11 110.23 1 1 0.60657 0.821 4.7044 2 Median 0.6749 0.84877 NaN 1 0 Median 0.54517 0.79414 NaN 1 0 Median 292960000 185610000 107350000 19133000 10222000 8910600 273830000 175380000 98442000 1139 872 1227 1826;1827 2954;2955;2956;2957;2958 2955 5 HLSPGITNTEDDDTLSTSSAEVK KDKVSILSTFLAPFKHLSPGITNTEDDDTL TEDDDTLSTSSAEVKENRNVGNLAARPPPS K H L V K E 1 0 1 3 0 0 2 1 1 1 2 1 0 0 1 4 4 0 0 1 0 0 23 0 2416.1242 Q9NS39 Q9NS39 48 70 ADARB2 Double-stranded RNA-specific editase B2 yes yes 3 5.6239E-08 44.258 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1140 936 1228 1828 2959 2959 1651 0 HLTDAYFK ATSTKIDISNVKIPKHLTDAYFKKKKLRKP SNVKIPKHLTDAYFKKKKLRKPRHQEGEIF K H L F K K 1 0 0 1 0 0 0 0 1 0 1 1 0 1 0 0 1 0 1 0 0 0 8 0 993.49198 Q8TBK5;Q8N5Z7;A0A024RBK3;Q02878;B4DRX3;Q9HBB3 Q8TBK5 211 218 RPL6 60S ribosomal protein L6 yes no 2 7.1474E-38 133.6 1 1 0.66547 0.82921 13.193 2 Median 0.73835 0.91028 NaN 1 0 Median 0.59978 0.75535 NaN 1 0 Median 244650000 150270000 94384000 24816000 13796000 11020000 219840000 136470000 83364000 1141 146 1229 1829;1830 2960;2961;2962 2962 3 HLTGEFEK LVGDGGTGKTTFVKRHLTGEFEKKYVATLG KTTFVKRHLTGEFEKKYVATLGVEVHPLVF R H L E K K 0 0 0 0 0 0 2 1 1 0 1 1 0 1 0 0 1 0 0 0 0 0 8 0 959.47125 H0YFC6;F5H018;B5MDF5;J3KQE5;P62826 H0YFC6 45 52 RAN GTP-binding nuclear protein Ran yes no 2 1.2173E-28 128.61 1 1.1973 1.5002 NaN 1 Median NaN NaN NaN 0 0 Median 1.1973 1.5002 NaN 1 0 Median 20523000 9452800 11071000 0 0 0 20523000 9452800 11071000 1142 534 1230 1831 2963;2964 2964 2 HLTVPK GEEEIKTYRSEEKRKHLTVPKENKIPTVSK TYRSEEKRKHLTVPKENKIPTVSKNHAHEH K H L P K E 0 0 0 0 0 0 0 0 1 0 1 1 0 0 1 0 1 0 0 1 0 0 6 0 693.41736 Q8WWQ0 Q8WWQ0 759 764 PHIP PH-interacting protein yes yes 2 0.0026069 91.093 1 0.83234 1.0493 NaN 1 Median NaN NaN NaN 0 0 Median 0.83234 1.0493 NaN 1 0 Median 103670000 55493000 48179000 0 0 0 103670000 55493000 48179000 1143 894 1231 1832 2965;2966 2965 2 HLTYNDFINK LHGLPEQFLYGTATKHLTYNDFINKELILF GTATKHLTYNDFINKELILFSNSDNERSIP K H L N K E 0 0 2 1 0 0 0 0 1 1 1 1 0 1 0 0 1 0 1 0 0 0 10 0 1263.6248 Q02880;Q71UH4;Q59H80;B4DKD0;E9PCY5 Q02880 713 722 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 2 0.00028617 91.265 1 0.58716 0.73043 NaN 1 Median NaN NaN NaN 0 0 Median 0.58716 0.73043 NaN 1 0 Median 30963000 19972000 10991000 0 0 0 30963000 19972000 10991000 1144 796 1232 1833 2967;2968 2968 2 HNDDEQYAWESSAGGSFTVR YSAYLVAEKVVVITKHNDDEQYAWESSAGG QYAWESSAGGSFTVRADHGEPIGRGTKVIL K H N V R A 2 1 1 2 0 1 2 2 1 0 0 0 0 1 0 3 1 1 1 1 0 0 20 0 2254.9516 Q2VPJ6;K9JA46;P07900;Q8TBA7;Q14568;A0A024RD80;P08238;B4DGL0;Q6PK50 A0A024RD80 149 168 HSP90AA1;EL52;HSP90AA2P;HSP90AB1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2;Heat shock protein HSP 90-beta no no 3 2.5997E-08 41.521 2 0.36313 0.46589 NaN 1 Median 0.36313 0.46589 NaN 1 0 Median NaN NaN NaN 0 0 Median 10607000 7188700 3418100 10607000 7188700 3418100 0 0 0 1145 167;688 1233 1834;1835 2969;2970;2971;2972 2972 4 HNKPEVEVR AALCLENFSSQVVERHNKPEVEVRGMISAF SQVVERHNKPEVEVRGMISAF_________ R H N V R G 0 1 1 0 0 0 2 0 1 0 0 1 0 0 1 0 0 0 0 2 0 0 9 1 1106.5833 F8WE39;F8WDD7;Q9H7Z5;H7C0A3;F8WCF6;A0A0A6YYG9;P59998 F8WE39 33 41 ARPC4-TTLL3;ARPC4 Actin-related protein 2/3 complex subunit 4 yes no 3 0.0037648 53.327 1 1.0363 1.3244 NaN 1 Median 1.0363 1.3244 NaN 1 0 Median NaN NaN NaN 0 0 Median 7507300 3730000 3777200 7507300 3730000 3777200 0 0 0 1146 231 1234 1836 2973;2974 2974 2 HNLEIIK FLMKHVFHPKRAVFRHNLEIIKTLVECWKD HPKRAVFRHNLEIIKTLVECWKDCLSIPYR R H N I K T 0 0 1 0 0 0 1 0 1 2 1 1 0 0 0 0 0 0 0 0 0 0 7 0 865.50215 P78527 P78527 2233 2239 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 6.1455E-05 98.997 1 0.67038 0.85019 NaN 1 Median NaN NaN NaN 0 0 Median 0.67038 0.85019 NaN 1 0 Median 18885000 11249000 7636400 0 0 0 18885000 11249000 7636400 1147 795 1235 1837 2975 2975 1 HNLLQACK VTAIETKLEQKRSDRHNLLQACKMQDIKLP EQKRSDRHNLLQACKMQDIKLPLSKGTMDD R H N C K M 1 0 1 0 1 1 0 0 1 0 2 1 0 0 0 0 0 0 0 0 0 0 8 0 982.50183 G8JLG1;Q14683;V9GY57 G8JLG1 905 912 SMC1A Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 2 0.021267 47.443 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3884600 3884600 0 0 0 0 3884600 3884600 0 1148 644 1236 1838 2976 2976 1 HNTAVSQLTK KMDVAQSELDIYLSRHNTAVSQLTKAKEAL IYLSRHNTAVSQLTKAKEALIAASETLKER R H N T K A 1 0 1 0 0 1 0 0 1 0 1 1 0 0 0 1 2 0 0 1 0 0 10 0 1097.5829 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 513 522 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 2 5.0796E-39 135.56 1 0.61616 0.77639 NaN 1 Median NaN NaN NaN 0 0 Median 0.61616 0.77639 NaN 1 0 Median 149360000 92186000 57175000 0 0 0 149360000 92186000 57175000 1149 941 1237 1839 2977;2978;2979 2979 3 HNVEVLGILSDDVETDTVAPGENLK GSICKGQQLVMMPNKHNVEVLGILSDDVET DDVETDTVAPGENLKIRLKGIEEEEILPGF K H N L K I 1 0 2 3 0 0 3 2 1 1 3 1 0 0 1 1 2 0 0 4 0 0 25 0 2663.329 H3BR35;Q7KZX8;B2RCT6;A8K2W7;P15170 H3BR35 345 369 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes no 3 2.3026E-05 33.835 1 1 1.532 1.887 164.25 2 Median 0.48654 0.59068 NaN 1 0 Median 4.8237 6.028 NaN 1 0 Median 26819000 7614500 19205000 5915500 4075700 1839800 20904000 3538800 17365000 1150 346 1238 1840;1841 2980;2981;2982 2982 3 HPAKPDPSGECNPDLR TKTPSSDVLVFDYTKHPAKPDPSGECNPDL PAKPDPSGECNPDLRLRGHQKEGYGLSWNS K H P L R L 1 1 1 2 1 0 1 1 1 0 1 1 0 0 4 1 0 0 0 0 0 0 16 1 1788.8213 E9PC52;Q6FHQ0;Q16576;Q5JP01 E9PC52 147 162 RBBP7 Histone-binding protein RBBP7 yes no 3 5.4261E-07 73.279 1 1 0.69774 0.94631 29.388 2 Median 0.59245 0.76875 NaN 1 0 Median 0.82175 1.1649 NaN 1 0 Median 30097000 17584000 12512000 14177000 9445400 4731700 15919000 8138700 7780700 1151 612 1239 1842;1843 2983;2984;2985;2986;2987 2987 5 HPDASVNFSEFSK YAFFVQTCREEHKKKHPDASVNFSEFSKKC KKHPDASVNFSEFSKKCSERWK________ K H P S K K 1 0 1 1 0 0 1 0 1 0 0 1 0 2 1 3 0 0 0 1 0 0 13 0 1463.6681 Q9NYD7;Q5T7C4;B7Z965;Q59GW1;Q75MM1;A0A024RDR0;P09429 Q9NYD7 31 43 HMG1;HMGB1;WUGSC:H_NH0244E06.1 High mobility group protein B1 yes no 2 0.00065627 67.252 1 0.75329 0.94288 NaN 1 Median NaN NaN NaN 0 0 Median 0.75329 0.94288 NaN 1 0 Median 10011000 5219200 4791400 0 0 0 10011000 5219200 4791400 1152 170 1240 1844 2988;2989 2989 2 HPDSSVNFAEFSK YAFFVQTCREEHKKKHPDSSVNFAEFSKKC KKHPDSSVNFAEFSKKCSERWKTMSAKEKS K H P S K K 1 0 1 1 0 0 1 0 1 0 0 1 0 2 1 3 0 0 0 1 0 0 13 0 1463.6681 D6R9A6;Q5U071;P26583 D6R9A6 31 43 HMGB2 High mobility group protein B2 yes no 2 0.0038963 40.015 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 7781000 7781000 0 0 0 0 7781000 7781000 0 1153 593 1241 1845 2990 2990 1 HPDVEVDGFSELR WYHFSCFWKVGHSIRHPDVEVDGFSELRWD IRHPDVEVDGFSELRWDDQQKVKKTAEAGG R H P L R W 0 1 0 2 0 0 2 1 1 0 1 0 0 1 1 1 0 0 0 2 0 0 13 0 1498.7052 A0A024R3T8;P09874;B2R5W3;B4E0E1;Q05D33;Q6PJL0;Q5VX84;Q5VX85 A0A024R3T8 66 78 PARP1 Poly [ADP-ribose] polymerase 1 yes no 2;3 0.0027951 47.559 3 0.4359 0.55258 27.438 2 Median NaN NaN NaN 0 0 Median 0.4359 0.55258 27.438 2 0 Median 38172000 28959000 9213500 0 0 0 38172000 28959000 9213500 1154 56 1242 1846;1847;1848 2991;2992;2993;2994 2991 4 HPEHAEQNIR EEEATASERNDADEKHPEHAEQNIRKSKKK DADEKHPEHAEQNIRKSKKKKRRHQEGKVS K H P I R K 1 1 1 0 0 1 2 0 2 1 0 0 0 0 1 0 0 0 0 0 0 0 10 0 1229.5901 A8KAG1;Q5T3I0;A0A0A0MRK1;E9PAV9;F8W895 A8KAG1 229 238 GPATCH4 G patch domain-containing protein 4 yes no 3 0.019541 23.012 1 0.78531 1.0531 NaN 1 Median NaN NaN NaN 0 0 Median 0.78531 1.0531 NaN 1 0 Median 8876800 4565400 4311400 0 0 0 8876800 4565400 4311400 1155 383 1243 1849 2995 2995 0 HPEHAEQNIRK EEEATASERNDADEKHPEHAEQNIRKSKKK ADEKHPEHAEQNIRKSKKKKRRHQEGKVSD K H P R K S 1 1 1 0 0 1 2 0 2 1 0 1 0 0 1 0 0 0 0 0 0 0 11 1 1357.6851 A8KAG1;Q5T3I0;A0A0A0MRK1;E9PAV9;F8W895 A8KAG1 229 239 GPATCH4 G patch domain-containing protein 4 yes no 3 0.0024856 47.559 2 1.008 1.2752 NaN 1 Median 1.008 1.2752 NaN 1 0 Median NaN NaN NaN 0 0 Median 4501800 2086600 2415200 4501800 2086600 2415200 0 0 0 1156 383 1244 1850;1851 2996;2997 2997 2 HPELNISEEGITK LKVRPDEIMRDYIQKHPELNISEEGITKST QKHPELNISEEGITKSTLTKAERQLKDKFD K H P T K S 0 0 1 0 0 0 3 1 1 2 1 1 0 0 1 1 1 0 0 0 0 0 13 0 1465.7413 B4DNQ1;E9PKP7;A8K962;P17480;O00164;B4DLB0;Q05BZ1 B4DNQ1 164 176 UBTF Nucleolar transcription factor 1 yes no 2 2.7044E-55 143.42 1 1 0.85258 1.052 6.6468 2 Median 0.91228 1.1026 NaN 1 0 Median 0.79679 1.0037 NaN 1 0 Median 77565000 42273000 35292000 6090200 3270200 2820000 71475000 39002000 32472000 1157 376 1245 1852;1853 2998;2999;3000 3000 3 HPGSFDVVHVK GANLGRIGVITNRERHPGSFDVVHVKDANG NRERHPGSFDVVHVKDANGNSFATRLSNIF R H P V K D 0 0 0 1 0 0 0 1 2 0 0 1 0 1 1 1 0 0 0 3 0 0 11 0 1220.6302 Q96IR1;B2R491;P62701;Q53HV1;C9JEH7;A4FU11;Q496E4;P22090 Q96IR1 181 191 RPS4X;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1 yes no 3 0.0017964 54.784 1 0.46105 0.61156 NaN 1 Median NaN NaN NaN 0 0 Median 0.46105 0.61156 NaN 1 0 Median 5916300 3895700 2020600 0 0 0 5916300 3895700 2020600 1158 396 1246 1854 3001;3002;3003 3002 3 HPNYSPPGSPIEK SERGSPIEKYMRPAKHPNYSPPGSPIEKYQ AKHPNYSPPGSPIEKYQYPLFGLPFVHNDF K H P E K Y 0 0 1 0 0 0 1 1 1 1 0 1 0 0 4 2 0 0 1 0 0 0 13 0 1421.6939 Q9UHF7;E5RFF3;H0YAV4 Q9UHF7 1077 1089 TRPS1 Zinc finger transcription factor Trps1 yes no 2 1.6969E-06 96.673 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1159 951 1247 1855;1856 3004;3005;3006;3007 3005 1699;1700 0 HPPGDEIYRK SQTILRRHMAKCVWKHPPGDEIYRKGSISV KCVWKHPPGDEIYRKGSISVFEVDGKKNKI K H P R K G 0 1 0 1 0 0 1 1 1 1 0 1 0 0 2 0 0 0 1 0 0 0 10 1 1210.6095 O95251;E7EUP3;B7Z4D9;B3KVJ2;B4DJ40 O95251 392 401 KAT7 Histone acetyltransferase KAT7;Histone acetyltransferase yes no 3 0.026642 20.777 1 0.72181 0.91382 NaN 1 Median 0.72181 0.91382 NaN 1 0 Median NaN NaN NaN 0 0 Median 5394100 3209900 2184200 5394100 3209900 2184200 0 0 0 1160 718 1248 1857 3008 3008 1 HPQEQPLW LQEASSFFQRDRPARHPQEQPLW_______ QRDRPARHPQEQPLW_______________ R H P L W - 0 0 0 0 0 2 1 0 1 0 1 0 0 0 2 0 0 1 0 0 0 0 8 0 1033.4981 A0A087WY73;Q16378 A0A087WY73 140 147 PRR4 Proline-rich protein 4 yes no 1;2 8.0849E-06 83.801 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 28947000 0 0 28947000 0 0 0 0 0 1161 197 1249 1858;1859 3009;3010;3011 3009 3 HPSKPDPSGECNPDLR TKTPSSDVLVFDYTKHPSKPDPSGECNPDL PSKPDPSGECNPDLRLRGHQKEGYGLSWNP K H P L R L 0 1 1 2 1 0 1 1 1 0 1 1 0 0 4 2 0 0 0 0 0 0 16 1 1804.8162 Q09028 Q09028 157 172 RBBP4 Histone-binding protein RBBP4 yes yes 3 9.8346E-05 59.862 1 0.71992 0.92725 NaN 1 Median 0.71992 0.92725 NaN 1 0 Median NaN NaN NaN 0 0 Median 9640500 4816600 4823900 9640500 4816600 4823900 0 0 0 1162 803 1250 1860 3012 3012 1 HPVLIFITEK DEEVIKWTKFFVVFRHPVLIFITEKHGNYF FVVFRHPVLIFITEKHGNYFAYVQMFNSRI R H P E K H 0 0 0 0 0 0 1 0 1 2 1 1 0 1 1 0 1 0 0 1 0 0 10 0 1195.6965 J3QR28;Q9H8H0 J3QR28 36 45 NOL11 Nucleolar protein 11 yes no 2 0.01686 46.462 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1579100 1579100 0 0 0 0 1579100 1579100 0 1163 685 1251 1861 3013 3013 1 HQAFEAELHANADR PTNIQLSKLLSKHQKHQAFEAELHANADRI KHQAFEAELHANADRIRGVIDMGNSLIERG K H Q D R I 4 1 1 1 0 1 2 0 2 0 1 0 0 1 0 0 0 0 0 0 0 0 14 0 1607.7441 A0A0D9SF54;A0A0D9SGF6;Q13813;Q9UG16;A0A024R889 A0A0D9SF54 1577 1590 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 yes no 3 0.012145 23.881 1 0.73401 0.94046 NaN 1 Median 0.73401 0.94046 NaN 1 0 Median NaN NaN NaN 0 0 Median 9112100 4750800 4361300 9112100 4750800 4361300 0 0 0 1164 250 1252 1862 3014 3014 1 HQEGEIFDTEK LTDAYFKKKKLRKPRHQEGEIFDTEKEKYE RKPRHQEGEIFDTEKEKYEITEQRKIDQKA R H Q E K E 0 0 0 1 0 1 3 1 1 1 0 1 0 1 0 0 1 0 0 0 0 0 11 0 1331.5994 Q8TBK5;Q8N5Z7;A0A024RBK3;Q02878;B4DRX3;B2R4K7;Q9HBB3 Q8TBK5 227 237 RPL6 60S ribosomal protein L6 yes no 2 8.223E-81 152.7 1 3 0.60862 0.76727 12.271 3 Median 0.75056 0.90188 NaN 1 0 Median 0.58587 0.73751 5.5947 2 0 Median 180640000 115740000 64899000 48039000 28711000 19328000 132600000 87032000 45571000 1165 146 1253 1863;1864;1865;1866 3015;3016;3017;3018;3019;3020;3021;3022;3023;3024;3025 3015 11 HQELLQK ARRLRWLQQEEEERRHQELLQKKKEEEQER QQEEEERRHQELLQKKKEEEQERLRKAAEA R H Q Q K K 0 0 0 0 0 2 1 0 1 0 2 1 0 0 0 0 0 0 0 0 0 0 7 0 894.49232 Q9NQS7;B3KPD3 Q9NQS7 660 666 INCENP Inner centromere protein yes no 2 0.029405 71.501 1 0.7485 0.94089 NaN 1 Median NaN NaN NaN 0 0 Median 0.7485 0.94089 NaN 1 0 Median 53348000 31195000 22153000 0 0 0 53348000 31195000 22153000 1166 932 1254 1867 3026 3026 1 HQLEDLR KDPPIYSVGAFENFRHQLEDLRQLDNFKHP VGAFENFRHQLEDLRQLDNFKHPQRDFRQP R H Q L R Q 0 1 0 1 0 1 1 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 7 0 909.46683 B9ZVT1;Q8IXT5 B9ZVT1 529 535 RBM12B RNA-binding protein 12B yes no 2 0.029109 63.565 1 0.44548 0.59731 NaN 1 Median NaN NaN NaN 0 0 Median 0.44548 0.59731 NaN 1 0 Median 8943700 5271300 3672400 0 0 0 8943700 5271300 3672400 1167 556 1255 1868 3027 3027 1 HQLEEELR LETDRRGALKAQTWKHQLEEELRQQKEAAC LKAQTWKHQLEEELRQQKEAACFKARPNTV K H Q L R Q 0 1 0 0 0 1 3 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 8 0 1052.5251 B3KM90;Q643R0;Q9ULW0;Q96FC3 B3KM90 471 478 HCTP4;TPX2 Targeting protein for Xklp2 yes no 2 0.010204 61.962 1 0.55316 0.75789 NaN 1 Median NaN NaN NaN 0 0 Median 0.55316 0.75789 NaN 1 0 Median 43992000 26122000 17870000 0 0 0 43992000 26122000 17870000 1168 427 1256 1869 3028 3028 1 HQLGPSLRSPPR HRFSKGLNGTPRELRHQLGPSLRSPPRVIS ELRHQLGPSLRSPPRVISRPPPSVSPPKCI R H Q P R V 0 2 0 0 0 1 0 1 1 0 2 0 0 0 3 2 0 0 0 0 0 0 12 1 1343.7422 A0A0C4DGG3;B7ZB05;B4DSN4;Q8NHM5 A0A0C4DGG3 378 389 KDM2B Lysine-specific demethylase 2B yes no 3 0.00012545 75.462 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1169 243 1257 1870 3029;3030 3030 334 0 HQQIPLHSPPSK APASYSPIQPHSLIKHQQIPLHSPPSKVSH LIKHQQIPLHSPPSKVSHHQLILQQQQQQI K H Q S K V 0 0 0 0 0 2 0 0 2 1 1 1 0 0 3 2 0 0 0 0 0 0 12 0 1367.731 E7EX82;B4E2T1;Q8NDX5;C9JAU4;B4DYD1 E7EX82 267 278 PHC3 Polyhomeotic-like protein 3 yes no 3 0.00015992 86.548 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1170 521 1258 1871 3031;3032 3032 754 0 HQVEQLSSSLK AQTLQQQEQASQGLRHQVEQLSSSLKQKEQ QGLRHQVEQLSSSLKQKEQQLKEVAEKQEA R H Q L K Q 0 0 0 0 0 2 1 0 1 0 2 1 0 0 0 3 0 0 0 1 0 0 11 0 1254.6568 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q59HB8;A0A024R5G4;F5H4J1;A8K394;Q3SYK8;F5H6Y5 A0A087WY61 551 561 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 yes no 2 1.5345E-117 167.11 1 0.31593 0.39683 NaN 1 Median NaN NaN NaN 0 0 Median 0.31593 0.39683 NaN 1 0 Median 47905000 35859000 12047000 0 0 0 47905000 35859000 12047000 1171 71 1259 1872 3033;3034 3033 2 HRPSPPATPPPK KTRRLSPSASPPRRRHRPSPPATPPPKTRH RRRHRPSPPATPPPKTRHSPTPQQSNRTRK R H R P K T 1 1 0 0 0 0 0 0 1 0 0 1 0 0 6 1 1 0 0 0 0 0 12 1 1280.699 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3;M0R088;E9PCT1 A0A0S2Z4W1 399 410 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 3 0.00036991 65.374 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1172 266 1260 1873 3035 3035 360 0 HSEAFEALQQK LKSDSHGPKEDGGFRHSEAFEALQQKSQGL GGFRHSEAFEALQQKSQGLDSRLQHVEDGV R H S Q K S 2 0 0 0 0 2 2 0 1 0 1 1 0 1 0 1 0 0 0 0 0 0 11 0 1286.6255 B3KVX6;Q8TB01;Q6NWZ1;A0A024RBH2;Q07065 B3KVX6 314 324 CKAP4 Cytoskeleton-associated protein 4 yes no 2 6.3775E-13 87.895 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 4527800 0 4527800 0 0 0 4527800 0 4527800 1173 143 1261 1874 3036 3036 1 HSGPNSADSANDGFVR EVFKSHRTEMDWVLKHSGPNSADSANDGFV SGPNSADSANDGFVRLRGLPFGCTKEEIVQ K H S V R L 2 1 2 2 0 0 0 2 1 0 0 0 0 1 1 3 0 0 0 1 0 0 16 0 1629.7132 A0A024R7T3;P52597;B4DKS8 A0A024R7T3 99 114 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes no 3 0.00093781 44.005 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 4672000 0 4672000 0 0 0 4672000 0 4672000 1174 95 1262 1875 3037 3037 1 HSLYTAELITVPFDSESPIR QLKASTQKAANLSEKHSLYTAELITVPFDS AELITVPFDSESPIRMKFTRISTPKKSKKK K H S I R M 1 1 0 1 0 0 2 0 1 2 2 0 0 1 2 3 2 0 1 1 0 0 20 0 2274.1532 A0A075B754;Q96QE3;H0UIC2 A0A075B754 637 656 ATAD5 ATPase family AAA domain-containing protein 5 yes no 2;3 9.7116E-25 105.9 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1175 177 1263 1876;1877 3038;3039;3040 3038 240 0 HSPIAPSSPSPQVLAQK FSTPTGSRTDSQSVRHSPIAPSSPSPQVLA PIAPSSPSPQVLAQKYSLVAKQESVVRRAS R H S Q K Y 2 0 0 0 0 2 0 0 1 1 1 1 0 0 4 4 0 0 0 1 0 0 17 0 1742.9315 Q9NQS7;B3KPD3 Q9NQS7 305 321 INCENP Inner centromere protein yes no 2;3 2.3986E-151 174.62 6 4 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1176 932 1264;1265;1266 1878;1879;1880;1881;1882;1883;1884;1885;1886;1887 3041;3042;3043;3044;3045;3046;3047;3048;3049;3050;3051;3052;3053;3054;3055;3056;3057;3058 3052 1633;1634;1635;1636 0 HSQAVEELAEQLEQTK EAKTHEAQIQEMRQKHSQAVEELAEQLEQT SQAVEELAEQLEQTKRVKANLEKAKQTLEN K H S T K R 2 0 0 0 0 3 4 0 1 0 2 1 0 0 0 1 1 0 0 1 0 0 16 0 1838.901 A0A024R1N1;A0A0U4BW16;P35579;Q86XU5 A0A024R1N1 1194 1209 MYH9 Myosin-9 yes no 3 0.00047029 38.777 1 1.0476 1.2682 NaN 1 Median 1.0476 1.2682 NaN 1 0 Median NaN NaN NaN 0 0 Median 6025100 3131800 2893300 6025100 3131800 2893300 0 0 0 1177 32 1267 1888 3059 3059 1 HSQYHVDGSLEK DHYKAKATRHIFLIRHSQYHVDGSLEKDRT LIRHSQYHVDGSLEKDRTLTPLGREQAELT R H S E K D 0 0 0 1 0 1 1 1 2 0 1 1 0 0 0 2 0 0 1 1 0 0 12 0 1398.6528 Q96HS1 Q96HS1 105 116 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 3 0.0011664 59.57 1 0.72112 0.87249 NaN 1 Median 0.72112 0.87249 NaN 1 0 Median NaN NaN NaN 0 0 Median 10423000 5592400 4830600 10423000 5592400 4830600 0 0 0 1178 904 1268 1889 3060;3061;3062;3063 3062 4 HSSGCAFLSVK EGWEPDDDPIEEHKKHSSGCAFLSVKKQFE EHKKHSSGCAFLSVKKQFEELTLGEFLKLD K H S V K K 1 0 0 0 1 0 0 1 1 0 1 1 0 1 0 3 0 0 0 1 0 0 11 0 1191.5706 B7Z7B9;A3E0Z5;E7CU85;A0A0B4J1S3;H3BLT4;O15392;K7EMW2 B7Z7B9 80 90 BIRC5 Baculoviral IAP repeat-containing protein 5 yes no 2 0.0016323 75.652 1 0.41758 0.53512 NaN 1 Median NaN NaN NaN 0 0 Median 0.41758 0.53512 NaN 1 0 Median 17701000 12906000 4795200 0 0 0 17701000 12906000 4795200 1179 234 1269 1890 3064;3065 3064 2 HTASINDLER PGNVLTSTAVKDQNKHTASINDLERETQPS KDQNKHTASINDLERETQPSYDIDNFDIDD K H T E R E 1 1 1 1 0 0 1 0 1 1 1 0 0 0 0 1 1 0 0 0 0 0 10 0 1154.568 H0YNU5;B2RAN0;P54132;B7Z2X2;B7ZKN7 H0YNU5 536 545 BLM Bloom syndrome protein yes no 2 0.016768 45.368 1 0.75828 1.0167 NaN 1 Median NaN NaN NaN 0 0 Median 0.75828 1.0167 NaN 1 0 Median 8942200 5208500 3733700 0 0 0 8942200 5208500 3733700 1180 412 1270 1891 3066 3066 1 HTDVQFYTEVGEITTDLGK LHFHLKNAIMFGKKRHTDVQFYTEVGEITT QFYTEVGEITTDLGKHQHMHDRDDLYAEQM R H T G K H 0 0 0 2 0 1 2 2 1 1 1 1 0 1 0 0 4 0 1 2 0 0 19 0 2152.0324 Q9Y5B9 Q9Y5B9 735 753 SUPT16H FACT complex subunit SPT16 yes yes 3 0.0079965 21.569 2 0.70361 0.88713 0.39695 2 Median NaN NaN NaN 0 0 Median 0.70361 0.88713 0.39695 2 0 Median 18181000 11801000 6380000 0 0 0 18181000 11801000 6380000 1181 967 1271 1892;1893 3067;3068;3069 3067 2 HTFSGVASVESSSGEAFHVGK VAVPLPLHRAHYDLRHTFSGVASVESSSGE ASVESSSGEAFHVGKTPIVGQPSIPGGPVR R H T G K T 2 0 0 0 0 0 2 3 2 0 0 1 0 2 0 5 1 0 0 3 0 0 21 0 2118.997 CON__P12763 CON__P12763 313 333 yes yes 3 0.00044246 44.089 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 + 1182 578 1272 1894 3070 3070 864;865;866 0 HTGPNSPDTANDGFVR EVFKSNNVEMDWVLKHTGPNSPDTANDGFV TGPNSPDTANDGFVRLRGLPFGCSKEEIVQ K H T V R L 1 1 2 2 0 0 0 2 1 0 0 0 0 1 2 1 2 0 0 1 0 0 16 0 1683.7601 E9PCY7;G8JLB6;P31943;D6RBM0;E7EQJ0;D6RAM1;E5RGV0;D6R9T0;D6RFM3;D6RIT2;D6RIU0;D6RDU3;D6RJ04;D6RIH9;E5RGH4;H0YAQ2;P55795 E9PCY7 99 114 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 no no 2;3 3.3526E-74 148.52 2 3 2.3024 3.0663 NaN 1 Median NaN NaN NaN 0 0 Median 2.3024 3.0663 NaN 1 0 Median 10549000 3474400 7074800 0 0 0 10549000 3474400 7074800 1183 614;780 1273;1274 1895;1896;1897;1898;1899 3071;3072;3073;3074;3075;3076;3077;3078;3079;3080;3081;3082;3083 3074 930 2 HTLNQIDSVK AAVDYINKHLPRGYKHTLNQIDSVKVWPRR PRGYKHTLNQIDSVKVWPRRPTGEVYDIEI K H T V K V 0 0 1 1 0 1 0 0 1 1 1 1 0 0 0 1 1 0 0 1 0 0 10 0 1153.6091 CON__P12763 CON__P12763 58 67 yes yes 2 0.0071126 61.56 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3805600 3805600 0 0 0 0 3805600 3805600 0 + 1184 578 1275 1900 3084 3084 1 HTSAEEEEPPPVK SSLSSTEIRRHSQRRHTSAEEEEPPPVKIA RRHTSAEEEEPPPVKIAWKTAAARKSLPAS R H T V K I 1 0 0 0 0 0 4 0 1 0 0 1 0 0 3 1 1 0 0 1 0 0 13 0 1448.6783 Q9BZ95 Q9BZ95 455 467 WHSC1L1 Histone-lysine N-methyltransferase NSD3 yes yes 2 0.0021287 56.139 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1185 923 1276 1901 3085 3085 1605 0 HVAEDLGK GAATLVDEVGVDVAKHVAEDLGKVFGERFG VGVDVAKHVAEDLGKVFGERFGGGNPELLT K H V G K V 1 0 0 1 0 0 1 1 1 0 1 1 0 0 0 0 0 0 0 1 0 0 8 0 867.44503 H0YFD6;B4DDZ5;B4DRH6;E9KL44;P40939 H0YFD6 84 91 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes no 2 0.0065431 81.191 1 0.91287 1.2053 NaN 1 Median NaN NaN NaN 0 0 Median 0.91287 1.2053 NaN 1 0 Median 12963000 5993000 6970000 0 0 0 12963000 5993000 6970000 1186 459 1277 1902 3086 3086 1 HVATEYQENK KTPPAPSPFDLPELKHVATEYQENKAPGKK LPELKHVATEYQENKAPGKKKKRALASNTS K H V N K A 1 0 1 0 0 1 2 0 1 0 0 1 0 0 0 0 1 0 1 1 0 0 10 0 1217.5677 Q59HG1;O95239 Q59HG1 1198 1207 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A yes no 2 1.0455E-11 90.906 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3469900 3469900 0 0 0 0 3469900 3469900 0 1187 717 1278 1903 3087 3087 1 HVDYVADQIVTK QISFVNSIATSKGGRHVDYVADQIVTKLVD GGRHVDYVADQIVTKLVDVVKKKNKGGVAV R H V T K L 1 0 0 2 0 1 0 0 1 1 0 1 0 0 0 0 1 0 1 3 0 0 12 0 1386.7143 P11388 P11388 325 336 TOP2A DNA topoisomerase 2-alpha yes yes 2 2.549E-303 220.5 1 1 0.84981 1.0557 5.1256 2 Median 0.89268 1.0946 NaN 1 0 Median 0.809 1.0181 NaN 1 0 Median 407270000 225060000 182210000 28187000 15359000 12828000 379080000 209700000 169380000 1188 734 1279 1904;1905 3088;3089;3090 3090 3 HVDYVVDQVVGK QISFVNSIATTKGGRHVDYVVDQVVGKLIE GGRHVDYVVDQVVGKLIEVVKKKNKAGVSV R H V G K L 0 0 0 2 0 1 0 1 1 0 0 1 0 0 0 0 0 0 1 5 0 0 12 0 1356.7038 Q02880;Q71UH4;B4DKD0;E9PCY5 Q02880 346 357 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 2 1.1324E-65 147.91 1 0.6001 0.74241 NaN 1 Median NaN NaN NaN 0 0 Median 0.6001 0.74241 NaN 1 0 Median 26179000 15362000 10818000 0 0 0 26179000 15362000 10818000 1189 796 1280 1906 3091;3092 3092 2 HVFGQAVK ______________________________ VRQSKFRHVFGQAVKNDQCYDDIRVSRVTW R H V V K N 1 0 0 0 0 1 0 1 1 0 0 1 0 1 0 0 0 0 0 2 0 0 8 0 884.48684 F8W1H8;F8VUX3;F8VSA4;F8VRE9;F8VTT6;F8VVB7;B4DMH3;Q53G58;B3KN06;A0A024RBI5;Q59EA2;Q9ULV4 F8W1H8 12 19 CORO1C Coronin;Coronin-1C yes no 2 0.0058464 85.359 1 2.4448 3.0207 NaN 1 Median NaN NaN NaN 0 0 Median 2.4448 3.0207 NaN 1 0 Median 25184000 7956300 17228000 0 0 0 25184000 7956300 17228000 1190 145 1281 1907 3093;3094 3093 2 HVFHPK KDEVLANRLLNFLMKHVFHPKRAVFRHNLE NRLLNFLMKHVFHPKRAVFRHNLEIIKTLV K H V P K R 0 0 0 0 0 0 0 0 2 0 0 1 0 1 1 0 0 0 0 1 0 0 6 0 763.41294 P78527 P78527 2222 2227 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0069859 88.626 1 0.41373 0.50381 NaN 1 Median 0.41373 0.50381 NaN 1 0 Median NaN NaN NaN 0 0 Median 10958000 7976600 2981800 10958000 7976600 2981800 0 0 0 1191 795 1282 1908 3095;3096 3095 2 HVMQPYYK VGLNALEEWSIYIDRHVMQPYYKDILPCLD WSIYIDRHVMQPYYKDILPCLDGYLKTSAL R H V Y K D 0 0 0 0 0 1 0 0 1 0 0 1 1 0 1 0 0 0 2 1 0 0 8 0 1064.5113 P78527;B4DL41 P78527 783 790 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 0.0038245 49.058 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1192 795 1283 1909 3097 3097 188 1 HVQGILR ______________________________ SLKLNGGRHVQGILRGFDPFMNLVIDECVE R H V L R G 0 1 0 0 0 1 0 1 1 1 1 0 0 0 0 0 0 0 0 1 0 0 7 0 821.48717 Q49AN9;F5H013;C9JVQ0;P62308;A8MWD9 Q49AN9 14 20 SNRPG;SNRPGP15 Small nuclear ribonucleoprotein G;Putative small nuclear ribonucleoprotein G-like protein 15 yes no 2 1.8005E-10 105.22 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 34108000 34108000 0 0 0 0 34108000 34108000 0 1193 386 1284 1910 3098 3098 1 HVTLPSSPR KQALIRVLRPRNKRRHVTLPSSPRSNTPMG PRNKRRHVTLPSSPRSNTPMGDKDDDDDDD R H V P R S 0 1 0 0 0 0 0 0 1 0 1 0 0 0 2 2 1 0 0 1 0 0 9 0 992.54033 X6RE05;A0A0A0MSW0;A0A024RAC9;Q5T4S7 X6RE05 356 364 UBR4;ZUBR1 E3 ubiquitin-protein ligase UBR4 yes no 2 0.00028999 77.192 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1194 128 1285 1911 3099 3099 191;192 0 HVTNPAFTK LVVQLLQFQEDAFGKHVTNPAFTKLPAKCF EDAFGKHVTNPAFTKLPAKCFMDFKAGGAL K H V T K L 1 0 1 0 0 0 0 0 1 0 0 1 0 1 1 0 2 0 0 1 0 0 9 0 1013.5294 Q58EY4;Q92922;Q05BW5;Q05CR1;F8WE13 Q58EY4 95 103 SMARCC1 SWI/SNF complex subunit SMARCC1 yes no 2 0.0013944 69.275 1 1.1233 1.4676 NaN 1 Median NaN NaN NaN 0 0 Median 1.1233 1.4676 NaN 1 0 Median 12284000 6603700 5680700 0 0 0 12284000 6603700 5680700 1195 839 1286 1912 3100;3101 3101 2 HVTYVVAK LRSLYKKAGLGKEKRHVTYVVAKKGVGRKV GLGKEKRHVTYVVAKKGVGRKVRRPAGVRG R H V A K K 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 1 3 0 0 8 0 915.5178 B4DKU3;Q8IY81 B4DKU3 676 683 FTSJ3 pre-rRNA processing protein FTSJ3 yes no 2 1.7929E-29 120.92 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 11960000 11960000 0 0 0 0 11960000 11960000 0 1196 474 1287 1913 3102 3102 1 HVVAVVK HSKPGSVPLVSEKKKHVVAVVK________ PLVSEKKKHVVAVVK_______________ K H V V K - 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 4 0 0 7 0 750.47521 A0A087WT20;Q9NV06 A0A087WT20 591 597 DCAF13 DDB1- and CUL4-associated factor 13 yes no 2 0.0054085 83.229 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 6100400 0 6100400 0 0 0 6100400 0 6100400 1197 179 1288 1914 3103 3103 1 HVVFIAQR QVRLVRELEKKFSGKHVVFIAQRRILPKPT EKKFSGKHVVFIAQRRILPKPTRKSRTKNK K H V Q R R 1 1 0 0 0 1 0 0 1 1 0 0 0 1 0 0 0 0 0 2 0 0 8 0 968.55558 P62081;B5MCP9 P62081 91 98 RPS7 40S ribosomal protein S7 yes no 2 6.6745E-19 116.35 1 0.34437 0.46148 NaN 1 Median NaN NaN NaN 0 0 Median 0.34437 0.46148 NaN 1 0 Median 31719000 22830000 8889000 0 0 0 31719000 22830000 8889000 1198 784 1289 1915 3104 3104 1 HVVSPEQIATSDK VRGHLHRAGLSYEARHVVSPEQIATSDKMQ ARHVVSPEQIATSDKMQHFKRTGTGTPVKR R H V D K M 1 0 0 1 0 1 1 0 1 1 0 1 0 0 1 2 1 0 0 2 0 0 13 0 1409.7151 A7E234;Q9H582;Q9NVH8;Q9NZF0;A0A087WZL9 A7E234 996 1008 ZNF644 Zinc finger protein 644 yes no 2 6.9539E-16 113.01 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1199 331 1290 1916;1917;1918 3105;3106;3107;3108;3109 3109 504 0 HWGGNVLGPK AIRTNYNDRYDEIRRHWGGNVLGPKSVARI DEIRRHWGGNVLGPKSVARIAKLEKAKAKE R H W P K S 0 0 1 0 0 0 0 3 1 0 1 1 0 0 1 0 0 1 0 1 0 0 10 0 1063.5563 P62424;Q9BY74;Q5T8U2 P62424 236 245 RPL7A;RP-L7a 60S ribosomal protein L7a yes no 2 0.0027601 84.498 1 0.59185 0.73468 NaN 1 Median NaN NaN NaN 0 0 Median 0.59185 0.73468 NaN 1 0 Median 28961000 18338000 10623000 0 0 0 28961000 18338000 10623000 1200 789 1291 1919 3110 3110 1 HYDDFFER DEEVFYCKVTNEIFRHYDDFFERTILCNSL VTNEIFRHYDDFFERTILCNSLVWSCAVTG R H Y E R T 0 1 0 2 0 0 1 0 1 0 0 0 0 2 0 0 0 0 1 0 0 0 8 0 1127.4672 D3DS96;Q9NRL2;Q05CW0;Q32ND1 D3DS96 36 43 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes no 2 0.0094193 63.48 1 0.64109 0.86037 NaN 1 Median NaN NaN NaN 0 0 Median 0.64109 0.86037 NaN 1 0 Median 8523100 5172200 3351000 0 0 0 8523100 5172200 3351000 1201 591 1292 1920 3111;3112 3111 2 HYGLSDSRK GASSAKETTSSSISRHYGLSDSRKRTRTGR SSSISRHYGLSDSRKRTRTGRSWPAAIPHL R H Y R K R 0 1 0 1 0 0 0 1 1 0 1 1 0 0 0 2 0 0 1 0 0 0 9 1 1061.5254 B4DZG1;Q96G26;Q9Y483 B4DZG1 371 379 MTF2 Metal-response element-binding transcription factor 2 yes no 3 0.0053044 37.191 1 0.71759 0.92301 NaN 1 Median 0.71759 0.92301 NaN 1 0 Median NaN NaN NaN 0 0 Median 8925300 4348900 4576500 8925300 4348900 4576500 0 0 0 1202 512 1293 1921 3113 3113 1 IACKSPPPESMDTPTSTR PDHTEESTTDDKTTKIACKSPPPESMDTPT KSPPPESMDTPTSTRRRPKTPLGKRDIVEE K I A T R R 1 1 0 1 1 0 1 0 0 1 0 1 1 0 4 3 3 0 0 0 0 0 18 1 1973.9187 P46013 P46013 2101 2118 MKI67 Antigen KI-67 yes yes 2;3 1.4677E-41 126.45 1 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1203 762 1294 1922;1923;1924 3114;3115;3116;3117;3118;3119;3120 3115 176 1207 0 IACKSPPPESVDTPTSTK PGPSEESMTDEKTTKIACKSPPPESVDTPT KSPPPESVDTPTSTKQWPKRSLRKADVEEE K I A T K Q 1 0 0 1 1 0 1 0 0 1 0 2 0 0 4 3 3 0 0 1 0 0 18 1 1913.9404 P46013 P46013 1127 1144 MKI67 Antigen KI-67 yes yes 2;3 1.6072E-235 198.55 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1204 762 1295 1925;1926;1927;1928 3121;3122;3123;3124;3125;3126;3127;3128;3129;3130;3131;3132;3133 3122 1208 0 IACKSPQPDPVDTPASTK TPGTDKPTTDEKTTKIACKSPQPDPVDTPA KSPQPDPVDTPASTKQRPKRNLRKADVEEE K I A T K Q 2 0 0 2 1 1 0 0 0 1 0 2 0 0 4 2 2 0 0 1 0 0 18 1 1910.9408 P46013 P46013 2340 2357 MKI67 Antigen KI-67 yes yes 2;3 2.5912E-41 123.2 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1205 762 1296 1929;1930;1931 3134;3135;3136;3137;3138;3139;3140 3135 1209 0 IACRSPQPDPVGTPTIFK PICTDKPTTHEKTTKIACRSPQPDPVGTPT RSPQPDPVGTPTIFKPQSKRSLRKADVEEE K I A F K P 1 1 0 1 1 1 0 1 0 2 0 1 0 1 4 1 2 0 0 1 0 0 18 1 1983.0248 P46013 P46013 2219 2236 MKI67 Antigen KI-67 yes yes 3 1.5434E-06 49.125 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1206 762 1297 1932;1933 3141;3142;3143 3141 1210;1975 0 IACRSPQPDPVGTPTIFKPQSK PICTDKPTTHEKTTKIACRSPQPDPVGTPT PDPVGTPTIFKPQSKRSLRKADVEEESLAL K I A S K R 1 1 0 1 1 2 0 1 0 2 0 2 0 1 5 2 2 0 0 1 0 0 22 2 2423.2631 P46013 P46013 2219 2240 MKI67 Antigen KI-67 yes yes 3;4 2.2016E-14 65.275 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1207 762 1298;1299 1934;1935;1936 3144;3145;3146;3147;3148;3149 3149 1210;1975 0 IAEFTTNLTEEEEK QNCKLAKEKKLLEDRIAEFTTNLTEEEEKS RIAEFTTNLTEEEEKSKSLAKLKNKHEAMI R I A E K S 1 0 1 0 0 0 5 0 0 1 1 1 0 1 0 0 3 0 0 0 0 0 14 0 1652.7781 A0A024R1N1;A0A0U4BW16;P35579;Q86XU5;Q99529 A0A024R1N1 1001 1014 MYH9 Myosin-9 yes no 2 0.026652 48.004 1 1.0968 1.3235 NaN 1 Median 1.0968 1.3235 NaN 1 0 Median NaN NaN NaN 0 0 Median 6191100 2789200 3401900 6191100 2789200 3401900 0 0 0 1208 32 1300 1937 3150 3150 0 IAPRPASGPIRPIVR RKIRRRKARQAKARRIAPRPASGPIRPIVR IAPRPASGPIRPIVRCPTVRYHTKVRAGRG R I A V R C 2 3 0 0 0 0 0 1 0 3 0 0 0 0 4 1 0 0 0 1 0 0 15 2 1598.9733 J3QSB4;Q6NZ55;A8K4C8;P26373 J3QSB4 46 60 RPL13 60S ribosomal protein L13 yes no 4 0.013431 17.489 1 0.40703 0.49385 NaN 1 Median NaN NaN NaN 0 0 Median 0.40703 0.49385 NaN 1 0 Median 7938700 5232000 2706700 0 0 0 7938700 5232000 2706700 1209 353 1301 1938 3151 3151 1 IAQLSESPVILTPNAK FKPNRTPSITPQEERIAQLSESPVILTPNA AQLSESPVILTPNAKRTLPVDSSHGFSSKK R I A A K R 2 0 1 0 0 1 1 0 0 2 2 1 0 0 2 2 1 0 0 1 0 0 16 0 1679.9458 Q6P4F7;H3BQ41;H3BR51 Q6P4F7 312 327 ARHGAP11A Rho GTPase-activating protein 11A yes no 2 0.00036937 46.592 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1210 861 1302 1939 3152 3152 1428 0 IAQVSPGPR KGQGVGTGRSASKLRIAQVSPGPRDSPAFP SASKLRIAQVSPGPRDSPAFPDSPWRERVL R I A P R D 1 1 0 0 0 1 0 1 0 1 0 0 0 0 2 1 0 0 0 1 0 0 9 0 923.51886 Q9NQS7;B3KPD3 Q9NQS7 259 267 INCENP Inner centromere protein yes no 2 3.2202E-28 123.79 1 2 0.38852 0.46184 NaN 1 Median NaN NaN NaN 0 0 Median 0.38852 0.46184 NaN 1 0 Median 3292000 2294900 997070 0 0 0 3292000 2294900 997070 1211 932 1303;1304 1940;1941;1942 3153;3154;3155;3156;3157;3158;3159;3160 3156 1637 2 IAQVSPGPRDSPAFPDSPWR KGQGVGTGRSASKLRIAQVSPGPRDSPAFP PGPRDSPAFPDSPWRERVLAPILPDNFSTP R I A W R E 2 2 0 2 0 1 0 1 0 1 0 0 0 1 5 3 0 1 0 1 0 0 20 1 2179.0811 Q9NQS7;B3KPD3 Q9NQS7 259 278 INCENP Inner centromere protein yes no 3 2.4614E-09 47.745 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1212 932 1305 1943;1944 3161;3162 3161 1631;1632;1637 0 IAQVSPGPRDSPAFPDSPWRER KGQGVGTGRSASKLRIAQVSPGPRDSPAFP PRDSPAFPDSPWRERVLAPILPDNFSTPTG R I A E R V 2 3 0 2 0 1 1 1 0 1 0 0 0 1 5 3 0 1 0 1 0 0 22 2 2464.2248 Q9NQS7;B3KPD3 Q9NQS7 259 280 INCENP Inner centromere protein yes no 3;4 1.5946E-16 77.733 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1213 932 1306 1945;1946 3163;3164;3165;3166 3164 1631;1632;1637 0 IATTTASAATAAAIGATPR KASPNTRSGTRRSPRIATTTASAATAAAIG TASAATAAAIGATPRAKGKAKH________ R I A P R A 8 1 0 0 0 0 0 1 0 2 0 0 0 0 1 1 5 0 0 0 0 0 19 0 1714.9214 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q59HB8;Q96HN5;H0YFY6;Q7Z757;Q9UNL7 A0A087WY61 2074 2092 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 yes no 2 0.0053999 38.028 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3754200 3754200 0 0 0 0 3754200 3754200 0 1214 71 1307 1947 3167 3167 1 ICGDIHGQYYDLLR FLSQPILLELEAPLKICGDIHGQYYDLLRL KICGDIHGQYYDLLRLFEYGGFPPESNYLF K I C L R L 0 1 0 2 1 1 0 2 1 2 2 0 0 0 0 0 0 0 2 0 0 0 14 0 1721.8195 A0A024RBP2;F8W0W8;P36873;Q9UPN1;F8VYE8;F8VR82;A0A087WYY5;F5H1L6;F5H037;E9PMD7;A0A140VJS9;B3KXM2;P62136 A0A024RBP2 61 74 PPP1CC;PPP1CA Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit no no 3 0.024707 26.781 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 4082500 4082500 0 0 0 0 4082500 4082500 0 1215 148;280 1308 1948 3168 3168 1 ICNEILTSPCSPEIR QDYQALTVHDNLAMKICNEILTSPCSPEIR ICNEILTSPCSPEIRVYTKALSSLELSSHL K I C I R V 0 1 1 0 2 0 2 0 0 3 1 0 0 0 2 2 1 0 0 0 0 0 15 0 1787.8546 Q6NUR1;Q9BPX3 Q6NUR1 834 848 NCAPG Condensin complex subunit 3 yes no 2 9.516E-07 72.898 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1216 857 1309 1949;1950 3169;3170 3169 1417;1418 0 IDEAESLNDEELEEK ELPNAAQAQKEEQLKIDEAESLNDEELEEK IDEAESLNDEELEEKEKLLTQGFTNWNKRD K I D E K E 1 0 1 2 0 0 6 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 15 0 1761.7792 B7ZAX9;B4DZC0;O60264 B7ZAX9 763 777 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes no 2 9.0542E-06 67.326 1 2 2.6349 3.4734 NaN 1 Median NaN NaN NaN 0 0 Median 2.6349 3.4734 NaN 1 0 Median 16002000 4625400 11377000 1323200 0 1323200 14679000 4625400 10053000 1217 510 1310;1311 1951;1952;1953 3171;3172;3173 3171 750 2 IDISPSTFR QEAAKNKKSPEIHRRIDISPSTFRKHGLAH PEIHRRIDISPSTFRKHGLAHDEMKSPREP R I D F R K 0 1 0 1 0 0 0 0 0 2 0 0 0 1 1 2 1 0 0 0 0 0 9 0 1034.5397 Q9Y2W1 Q9Y2W1 679 687 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 0.00033753 73.666 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1218 963 1312 1954;1955 3174;3175;3176 3176 1743 0 IDISPSTFRK QEAAKNKKSPEIHRRIDISPSTFRKHGLAH EIHRRIDISPSTFRKHGLAHDEMKSPREPG R I D R K H 0 1 0 1 0 0 0 0 0 2 0 1 0 1 1 2 1 0 0 0 0 0 10 1 1162.6346 Q9Y2W1 Q9Y2W1 679 688 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 0.002249 51.092 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1219 963 1313 1956 3177 3177 1743 0 IDISPSTLR EEHSTRQKSPEIHRRIDISPSTLRKHTRLA PEIHRRIDISPSTLRKHTRLAGEERVFKKK R I D L R K 0 1 0 1 0 0 0 0 0 2 1 0 0 0 1 2 1 0 0 0 0 0 9 0 1000.5553 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 Q6DCA8 655 663 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 1.5269E-08 100.88 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1220 622 1314 1957;1958 3178;3179;3180;3181;3182;3183;3184 3181 950 0 IDISPSTLRK EEHSTRQKSPEIHRRIDISPSTLRKHTRLA EIHRRIDISPSTLRKHTRLAGEERVFKKKK R I D R K H 0 1 0 1 0 0 0 0 0 2 1 1 0 0 1 2 1 0 0 0 0 0 10 1 1128.6503 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 Q6DCA8 655 664 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 0.001564 63.944 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1221 622 1315 1959 3185 3185 950 0 IDTIEIITDR TEEHHLRDYFEEYGKIDTIEIITDRQSGKK EEYGKIDTIEIITDRQSGKKRGFGFVTFDD K I D D R Q 0 1 0 2 0 0 1 0 0 4 0 0 0 0 0 0 2 0 0 0 0 0 10 0 1187.6398 I6L957;A0A087WUI2;A0A024RA28;P22626 I6L957 126 135 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 2 0.01065 51.268 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2336400 0 2336400 0 0 0 2336400 0 2336400 1222 125 1316 1960 3186 3186 1 IDVSINECYDGSYAGNPQDIHR SRFIFNYVYHPKGARIDVSINECYDGSYAG CYDGSYAGNPQDIHRQPGFAFSRNGPVKRT R I D H R Q 1 1 2 3 1 1 1 2 1 3 0 0 0 0 1 2 0 0 2 1 0 0 22 0 2522.1132 J3QQW9;A8K1U9;Q15022 J3QQW9 464 485 SUZ12 Polycomb protein SUZ12 yes no 3 0.00067291 27.61 1 0.90232 1.1535 NaN 1 Median 0.90232 1.1535 NaN 1 0 Median NaN NaN NaN 0 0 Median 10033000 4940400 5092200 10033000 4940400 5092200 0 0 0 1223 342 1317 1961 3187;3188 3187 2 IEALQNHENESVYK EKLSIMIEECGGLDKIEALQNHENESVYKA KIEALQNHENESVYKASLSLIEKYFSVEEE K I E Y K A 1 0 2 0 0 1 3 0 1 1 1 1 0 0 0 1 0 0 1 1 0 0 14 0 1672.8057 Q7Z726;A8K7D9;P52292 Q7Z726 473 486 KPNA2 Importin subunit alpha;Importin subunit alpha-1 yes no 3 0.00083165 48.608 1 0.44002 0.55325 NaN 1 Median NaN NaN NaN 0 0 Median 0.44002 0.55325 NaN 1 0 Median 8667000 5077400 3589700 0 0 0 8667000 5077400 3589700 1224 368 1318 1962 3189 3189 1 IEDFLERR LDEGKMKLDYILGLKIEDFLERRLQTQVFK DYILGLKIEDFLERRLQTQVFKLGLAKSIH K I E R R L 0 2 0 1 0 0 2 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 8 1 1076.5615 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 A0A024R4M0 102 109 RPS9 40S ribosomal protein S9 yes no 3 0.02177 21.448 1 0.45483 0.66237 NaN 1 Median NaN NaN NaN 0 0 Median 0.45483 0.66237 NaN 1 0 Median 8870300 5713000 3157400 0 0 0 8870300 5713000 3157400 1225 62 1319 1963 3190 3190 1 IEDNNTLVFIVDVK AIIKFPLTTESAMKKIEDNNTLVFIVDVKA KIEDNNTLVFIVDVKANKHQIKQAVKKLYD K I E V K A 0 0 2 2 0 0 1 0 0 2 1 1 0 1 0 0 1 0 0 3 0 0 14 0 1617.8614 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 92 105 RPL23A 60S ribosomal protein L23a yes no 2 0.0046519 50.207 2 0.70597 0.89238 60.985 2 Median NaN NaN NaN 0 0 Median 0.70597 0.89238 60.985 2 0 Median 28097000 19005000 9092800 0 0 0 28097000 19005000 9092800 1226 385 1320 1964;1965 3191;3192 3191 1 IEDVTPIPSDSTR SALRALARSGMKIGRIEDVTPIPSDSTRRK GRIEDVTPIPSDSTRRKGGRRGRRL_____ R I E T R R 0 1 0 2 0 0 1 0 0 2 0 0 0 0 2 2 2 0 0 1 0 0 13 0 1428.7096 P62263 P62263 129 141 RPS14 40S ribosomal protein S14 yes yes 2 0.0080676 53.569 1 0.38544 0.4936 NaN 1 Median NaN NaN NaN 0 0 Median 0.38544 0.4936 NaN 1 0 Median 17759000 11276000 6483300 0 0 0 17759000 11276000 6483300 1227 786 1321 1966 3193;3194 3193 2 IEDVTPIPSDSTRR SALRALARSGMKIGRIEDVTPIPSDSTRRK RIEDVTPIPSDSTRRKGGRRGRRL______ R I E R R K 0 2 0 2 0 0 1 0 0 2 0 0 0 0 2 2 2 0 0 1 0 0 14 1 1584.8107 P62263 P62263 129 142 RPS14 40S ribosomal protein S14 yes yes 3 0.00029885 57.136 1 0.22836 0.39104 NaN 1 Median NaN NaN NaN 0 0 Median 0.22836 0.39104 NaN 1 0 Median 36762000 29105000 7657700 0 0 0 36762000 29105000 7657700 1228 786 1322 1967 3195;3196;3197 3195 3 IEENSLKEEESIEGEK PNTPAPVPPAEDGIKIEENSLKEEESIEGE EENSLKEEESIEGEKEVKSTAPETAIECTQ K I E E K E 0 0 1 0 0 0 7 1 0 2 1 2 0 0 0 2 0 0 0 0 0 0 16 1 1861.8793 B3KY63;F5GWX5;A0A0C4DGG9;Q14839 B3KY63 1540 1555 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 2;3 7.4862E-08 89.913 3 4 0.88015 1.0702 34.914 2 Median 0.6938 0.83605 NaN 1 0 Median 1.1165 1.3698 NaN 1 0 Median 29525000 13985000 15540000 5232000 3178800 2053200 24293000 10806000 13486000 1229 244 1323;1324 1968;1969;1970;1971;1972;1973;1974 3198;3199;3200;3201;3202;3203;3204 3200 336;337 2 IEEVPELPLVVEDK AASALPALVMSKGHRIEEVPELPLVVEDKV RIEEVPELPLVVEDKVEGYKKTKEAVLLLK R I E D K V 0 0 0 1 0 0 4 0 0 1 2 1 0 0 2 0 0 0 0 3 0 0 14 0 1607.8658 Q59GY2;P36578;H3BM89;B4DMJ2;Q53G74;B4DFI6 Q59GY2 158 171 RPL4 60S ribosomal protein L4 yes no 2 0.016671 33.866 1 0.53445 0.60154 NaN 1 Median 0.53445 0.60154 NaN 1 0 Median NaN NaN NaN 0 0 Median 1485500 1004000 481490 1485500 1004000 481490 0 0 0 1230 755 1325 1975 3205 3205 1 IEEVPELPLVVEDKVEGYKK AASALPALVMSKGHRIEEVPELPLVVEDKV ELPLVVEDKVEGYKKTKEAVLLLKKLKAWN R I E K K T 0 0 0 1 0 0 5 1 0 1 2 3 0 0 2 0 0 0 1 4 0 0 20 2 2312.2515 Q59GY2;P36578;H3BM89;B4DMJ2;Q53G74;B4DFI6 Q59GY2 158 177 RPL4 60S ribosomal protein L4 yes no 4 0.021412 11.788 1 0.63955 0.92355 NaN 1 Median NaN NaN NaN 0 0 Median 0.63955 0.92355 NaN 1 0 Median 10460000 6514200 3945700 0 0 0 10460000 6514200 3945700 1231 755 1326 1976 3206 3206 1 IEIHYAK YGESNLVAEPQKVNKIEIHYAKTAKKMDMK AEPQKVNKIEIHYAKTAKKMDMKKLKQSMW K I E A K T 1 0 0 0 0 0 1 0 1 2 0 1 0 0 0 0 0 0 1 0 0 0 7 0 872.4756 B4DRG7;E9PHA2;A8K4T8;Q15003;H7C415 B4DRG7 607 613 NCAPH Condensin complex subunit 2 yes no 2 2.8856E-06 100.74 1 0.51912 0.65458 NaN 1 Median NaN NaN NaN 0 0 Median 0.51912 0.65458 NaN 1 0 Median 87606000 57681000 29925000 0 0 0 87606000 57681000 29925000 1232 354 1327 1977 3207 3207 1 IEQVDKEDEITEK PSGDSTLPTCSKKRKIEQVDKEDEITEKKA RKIEQVDKEDEITEKKAKKAKIKVKVEEEE K I E E K K 0 0 0 2 0 1 4 0 0 2 0 2 0 0 0 0 1 0 0 1 0 0 13 1 1574.7675 Q9Y2X3;B3KN82 Q9Y2X3 445 457 NOP58 Nucleolar protein 58 yes no 3 0.00020828 82.55 1 0.52858 0.65649 NaN 1 Median NaN NaN NaN 0 0 Median 0.52858 0.65649 NaN 1 0 Median 18316000 11246000 7069400 0 0 0 18316000 11246000 7069400 1233 964 1328 1978 3208;3209 3209 2 IEQVDKEDEITEKK PSGDSTLPTCSKKRKIEQVDKEDEITEKKA KIEQVDKEDEITEKKAKKAKIKVKVEEEEE K I E K K A 0 0 0 2 0 1 4 0 0 2 0 3 0 0 0 0 1 0 0 1 0 0 14 2 1702.8625 Q9Y2X3;B3KN82 Q9Y2X3 445 458 NOP58 Nucleolar protein 58 yes no 3 0.00081482 54.598 1 0.53514 0.77279 NaN 1 Median NaN NaN NaN 0 0 Median 0.53514 0.77279 NaN 1 0 Median 18852000 12301000 6551700 0 0 0 18852000 12301000 6551700 1234 964 1329 1979 3210;3211 3210 2 IERPGEGSPMVDNPMR SLNDCRIIFVDEVFKIERPGEGSPMVDNPM ERPGEGSPMVDNPMRRKSGPSCKHCKDDVN K I E M R R 0 2 1 1 0 0 2 2 0 1 0 0 2 0 3 1 0 0 0 1 0 0 16 1 1783.8345 A0A087WVR3;A0A087WTW0;Q96T88 A0A087WVR3 293 308 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes no 3 8.8864E-07 58.914 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1235 181 1330 1980 3212 3212 40;41 249 0 IESDEEEDFENVGK RVLPSEQESTKKPYRIESDEEEDFENVGKV RIESDEEEDFENVGKVGSPLDYSLVDLPST R I E G K V 0 0 1 2 0 0 5 1 0 1 0 1 0 1 0 1 0 0 0 1 0 0 14 0 1638.6897 Q96T23 Q96T23 1343 1356 RSF1 Remodeling and spacing factor 1 yes yes 2 2.0997E-11 106.13 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1236 910 1331 1981;1982 3213;3214;3215;3216;3217;3218 3213 1566 0 IETDEEESCDNAHGDANQPAR EEEEEGKPSRKRLHRIETDEEESCDNAHGD ESCDNAHGDANQPARDSQPRVLPSEQESTK R I E A R D 3 1 2 3 1 1 4 1 1 1 0 0 0 0 1 1 1 0 0 0 0 0 21 0 2356.9462 Q96T23 Q96T23 1303 1323 RSF1 Remodeling and spacing factor 1 yes yes 3 1.1682E-09 47.745 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1237 910 1332 1983 3219 3219 1567 0 IETVISDEEVIK ______________________________ QQKIETVISDEEVIKWTKFFVVFRHPVLIF K I E I K W 0 0 0 1 0 0 3 0 0 3 0 1 0 0 0 1 1 0 0 2 0 0 12 0 1373.729 J3QR28;Q9H8H0;J3QLQ6 J3QR28 15 26 NOL11 Nucleolar protein 11 yes no 2 0.0038119 59.426 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 4434600 4434600 0 0 0 0 4434600 4434600 0 1238 685 1333 1984 3220 3220 1 IEVQDTSGGTTALRPSASTQALSSSVSSSK CYQEVSQCFGVLSSRIEVQDTSGGTTALRP SASTQALSSSVSSSKLFSSSTAPHETSFGE R I E S K L 3 1 0 1 0 2 1 2 0 1 2 1 0 0 1 9 4 0 0 2 0 0 30 1 2951.4684 Q16531;B4DZP5;F5GY55;B7Z2A1 Q16531 740 769 DDB1 DNA damage-binding protein 1 yes no 3 8.708E-10 44.811 1 0.62007 0.82172 NaN 1 Median NaN NaN NaN 0 0 Median 0.62007 0.82172 NaN 1 0 Median 8900700 5398000 3502700 0 0 0 8900700 5398000 3502700 1239 827 1334 1985 3221;3222 3221 2 IFDEILVNAADNK GINYREVTFVPGLYKIFDEILVNAADNKQR YKIFDEILVNAADNKQRDPKMSCIRVTIDP K I F N K Q 2 0 2 2 0 0 1 0 0 2 1 1 0 1 0 0 0 0 0 1 0 0 13 0 1460.7511 P11388;J3KTB7;Q02880;Q71UH4;B4DKD0;E9PCY5 P11388 84 96 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2-beta;DNA topoisomerase 2 no no 2 0.00063264 78.692 1 0.77901 0.9601 NaN 1 Median NaN NaN NaN 0 0 Median 0.77901 0.9601 NaN 1 0 Median 23002000 13435000 9566000 0 0 0 23002000 13435000 9566000 1240 734;796 1335 1986 3223;3224 3223 2 IGDEYAEDSSDEEDIR QASTPCPRTEMASARIGDEYAEDSSDEEDI GDEYAEDSSDEEDIRNTVGNVPLEWYDDFP R I G I R N 1 1 0 4 0 0 4 1 0 2 0 0 0 0 0 2 0 0 1 0 0 0 16 0 1841.7439 B2RDN4;A8K3R2;Q14137;B4DEN9;A0A075B729 B2RDN4 118 133 BOP1 Ribosome biogenesis protein BOP1 yes no 2 1.0091E-158 150.59 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1241 349 1336 1987;1988;1989;1990 3225;3226;3227;3228 3227 528;529 0 IGEGTYGVVYK ______________________________ KIEKIGEGTYGVVYKGRHKTTGQVVAMKKI K I G Y K G 0 0 0 0 0 0 1 3 0 1 0 1 0 0 0 0 1 0 2 2 0 0 11 0 1184.6077 B7Z3D6;E5RIU6;A0A087WZZ9;I6L9I5;A0A024QZJ8;A0A024QZP7;Q5H9N4;P06493;G3V317;K7ELV5;E7ESI2;B4DDL9;A0A024RB10;A0A024RB77;A0A024R8R3;G3V5T9;P24941;Q00526 B7Z3D6 10 20 CDK1;CDC2;DKFZp686L20222;CDK2;CDK3 Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 yes no 2 0.00031229 78.934 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1242 6 1337 1991 3229 3229 2063 0 IGKPHTVPCK KLSIVPVRRGYWGNKIGKPHTVPCKVTGRC YWGNKIGKPHTVPCKVTGRCGSVLVRLIPA K I G C K V 0 0 0 0 1 0 0 1 1 1 0 2 0 0 2 0 1 0 0 1 0 0 10 1 1135.6172 H0YEN5;Q8J014;Q8N5L9;Q3KQT6;P15880;I3L404;E9PPT0;Q8NI61;E9PM36;E9PMM9;Q6IPX5 H0YEN5 76 85 RPS2;rps2;OK/KNS-cl.7 40S ribosomal protein S2 yes no 3 0.018781 27.481 1 0.77693 0.93927 NaN 1 Median 0.77693 0.93927 NaN 1 0 Median NaN NaN NaN 0 0 Median 5644600 3159300 2485200 5644600 3159300 2485200 0 0 0 1243 654 1338 1992 3230 3230 0 IGPLGLSPK CTGGEVGATSALAPKIGPLGLSPKKVGDDI SALAPKIGPLGLSPKKVGDDIAKATGDWKG K I G P K K 0 0 0 0 0 0 0 2 0 1 2 1 0 0 2 1 0 0 0 0 0 0 9 0 880.5382 D3DS95;Q76P68;Q59FI9;P30050 D3DS95 32 40 hCG_21173;cICK0721Q.2;RPL12 60S ribosomal protein L12 yes no 2 0.0010483 66.267 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1244 590 1339 1993;1994 3231;3232;3233;3234;3235 3232 876 0 IGRIEDVTPIPSDSTR GAQSALRALARSGMKIGRIEDVTPIPSDST GRIEDVTPIPSDSTRRKGGRRGRRL_____ K I G T R R 0 2 0 2 0 0 1 1 0 3 0 0 0 0 2 2 2 0 0 1 0 0 16 1 1754.9163 P62263 P62263 126 141 RPS14 40S ribosomal protein S14 yes yes 3 0.00018956 43.534 1 1 0.29697 0.46534 NaN 1 Median NaN NaN NaN 0 0 Median 0.29697 0.46534 NaN 1 0 Median 12347000 9036800 3310100 0 0 0 12347000 9036800 3310100 1245 786 1340;1341 1995;1996 3236;3237 3236 1265 1 IGVLDEGK RRLFEGNALLRRLVRIGVLDEGKMKLDYIL LLRRLVRIGVLDEGKMKLDYILGLKIEDFL R I G G K M 0 0 0 1 0 0 1 2 0 1 1 1 0 0 0 0 0 0 0 1 0 0 8 0 829.45453 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 A0A024R4M0 84 91 RPS9 40S ribosomal protein S9 yes no 2 0.0093793 63.565 1 0.55942 0.7091 NaN 1 Median NaN NaN NaN 0 0 Median 0.55942 0.7091 NaN 1 0 Median 7940800 5240000 2700800 0 0 0 7940800 5240000 2700800 1246 62 1342 1997 3238 3238 1 IHAESLLLDSPAVAK SALAQNTDLKERLRRIHAESLLLDSPAVAK IHAESLLLDSPAVAKSGDNLAEENSRDENR R I H A K S 3 0 0 1 0 0 1 0 1 1 3 1 0 0 1 2 0 0 0 1 0 0 15 0 1562.8668 Q9H4L5 Q9H4L5 401 415 OSBPL3 Oxysterol-binding protein-related protein 3 yes yes 2 0.00034486 57.348 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1247 925 1343 1998 3239 3239 1608 0 IHDLLK VKLESLEETNPEYAKIHDLLKTIGLDIGVA EETNPEYAKIHDLLKTIGLDIGVAEISQLA K I H L K T 0 0 0 1 0 0 0 0 1 1 2 1 0 0 0 0 0 0 0 0 0 0 6 0 737.44357 Q5VUA4 Q5VUA4 592 597 ZNF318 Zinc finger protein 318 yes yes 2 6.7438E-07 105.42 1 0.74603 0.93083 NaN 1 Median NaN NaN NaN 0 0 Median 0.74603 0.93083 NaN 1 0 Median 35131000 20608000 14523000 0 0 0 35131000 20608000 14523000 1248 851 1344 1999 3240;3241 3241 2 IHFFLSK TIAQGKGQKLCEIERIHFFLSKKKTDELRN QKLCEIERIHFFLSKKKTDELRNLHKLLYN R I H S K K 0 0 0 0 0 0 0 0 1 1 1 1 0 2 0 1 0 0 0 0 0 0 7 0 890.50142 P35659;B4DFG0;B4DNW3;D6R9L5;D6RDA2 P35659 94 100 DEK Protein DEK yes no 2 0.022086 80.462 1 0.58308 0.73149 NaN 1 Median NaN NaN NaN 0 0 Median 0.58308 0.73149 NaN 1 0 Median 44333000 28232000 16101000 0 0 0 44333000 28232000 16101000 1249 754 1345 2000 3242;3243 3242 2 IHFSPSEPK RVAITEHTEVREIKRIHFSPSEPKTSAVKK VREIKRIHFSPSEPKTSAVKKTKNVTTPIS R I H P K T 0 0 0 0 0 0 1 0 1 1 0 1 0 1 2 2 0 0 0 0 0 0 9 0 1040.5291 B3KWI2;Q8IZT6 B3KWI2 602 610 ASPM Abnormal spindle-like microcephaly-associated protein yes no 2 0.010748 41.652 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1250 450 1346 2001 3244 3244 657 0 IHGTEEGQQILK LQLQDCSIFIKIIDRIHGTEEGQQILKQPV IDRIHGTEEGQQILKQPVSERLDFVCSFLQ R I H L K Q 0 0 0 0 0 2 2 2 1 2 1 1 0 0 0 0 1 0 0 0 0 0 12 0 1351.7096 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;A0A024R5G4;F5H4J1;A8K394;Q3SYK8;F5H6Y5;F5H0Z7;F5H763;Q86XH4;F5H7R5;F5H4Y4;F5GWA2;F5GWK2;F5H073;F5H068;F8W6T3;F5H1L0;F5GZW1;G1UI36;F5H2F3;F5H3L6 A0A087WY61 43 54 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 yes no 2 0.010741 47.971 1 0.29981 0.37548 NaN 1 Median NaN NaN NaN 0 0 Median 0.29981 0.37548 NaN 1 0 Median 9047700 6212800 2835000 0 0 0 9047700 6212800 2835000 1251 71 1347 2002 3245 3245 1 IHLGSSPK TSASLEMNQGVSEERIHLGSSPKKGGNCDL QGVSEERIHLGSSPKKGGNCDLSHQERLQS R I H P K K 0 0 0 0 0 0 0 1 1 1 1 1 0 0 1 2 0 0 0 0 0 0 8 0 837.47085 Q5JW53;A8K3X3;Q9H410;Q4G1A1 Q5JW53 53 60 DSN1 Kinetochore-associated protein DSN1 homolog yes no 2 0.00025136 71.451 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1252 350 1348 2003 3246 3246 530;531 0 IHQEGDALPGHSK KSPREHNGKVKKKKKIHQEGDALPGHSKPS KKIHQEGDALPGHSKPSRSMESSPRKGSKK K I H S K P 1 0 0 1 0 1 1 2 2 1 1 1 0 0 1 1 0 0 0 0 0 0 13 0 1387.6844 Q1ED39;H3BPL4 Q1ED39 218 230 KNOP1 Lysine-rich nucleolar protein 1 yes no 3 0.022139 13.586 1 1.0282 1.304 NaN 1 Median NaN NaN NaN 0 0 Median 1.0282 1.304 NaN 1 0 Median 7893500 4141000 3752500 0 0 0 7893500 4141000 3752500 1253 829 1349 2004 3247 3247 1 IHSPIIR SVVQPQPLVVVKEEKIHSPIIRSEPFSPSL LVVVKEEKIHSPIIRSEPFSPSLRPEPPKH K I H I R S 0 1 0 0 0 0 0 0 1 3 0 0 0 0 1 1 0 0 0 0 0 0 7 0 834.50757 O60885 O60885 1115 1121 BRD4 Bromodomain-containing protein 4 yes yes 2 0.010241 69.812 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1254 707 1350 2005 3248 3248 1054 0 IIAPPER QKEITALAPSTMKIKIIAPPERKYSVWIGG APSTMKIKIIAPPERKYSVWIGGSILASLS K I I E R K 1 1 0 0 0 0 1 0 0 2 0 0 0 0 2 0 0 0 0 0 0 0 7 0 794.46504 P63261;B4E3A4;Q8WVW5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4DVQ0;B4E335;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;B3KUD3;B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;V9HVZ7;B4DUI8;B3KW67;A8K3K1;Q96DE1;Q96FU6;Q7Z7J6;A6NL76;Q562R1;F1BXA6;A4UCT3;A5GZ75;B3KPP5 P63261 329 335 ACTG1;PS1TP5BP1;ACTB;ACTA2;ACTG2;ACTA1;ACTC1;HEL-176;ACTBL2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2 yes no 2 0.011889 52.636 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 4671700 0 4671700 0 0 0 4671700 0 4671700 1255 794 1351 2006 3249;3250 3250 2 IIAPPERK QKEITALAPSTMKIKIIAPPERKYSVWIGG PSTMKIKIIAPPERKYSVWIGGSILASLST K I I R K Y 1 1 0 0 0 0 1 0 0 2 0 1 0 0 2 0 0 0 0 0 0 0 8 1 922.56 P63261;B4E3A4;Q8WVW5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4DVQ0;B4E335;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;B3KUD3;B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;V9HVZ7;B4DUI8;B3KW67;Q96DE1;Q96FU6;Q7Z7J6;A6NL76;Q562R1;F1BXA6;A4UCT3;A5GZ75;B3KPP5 P63261 329 336 ACTG1;PS1TP5BP1;ACTB;ACTA2;ACTG2;ACTA1;ACTC1;HEL-176;ACTBL2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2 yes no 3 0.017099 24.121 1 3.29 5.1885 NaN 1 Median NaN NaN NaN 0 0 Median 3.29 5.1885 NaN 1 0 Median 108200000 26003000 82193000 0 0 0 108200000 26003000 82193000 1256 794 1352 2007 3251 3251 1 IICHSYLER RLAKKTAEEPAASGRIICHSYLERLLNVEV PAASGRIICHSYLERLLNVEVPQKVGSEQK R I I E R L 0 1 0 0 1 0 1 0 1 2 1 0 0 0 0 1 0 0 1 0 0 0 9 0 1189.5914 Q9NQS7;B3KPD3 Q9NQS7 353 361 INCENP Inner centromere protein yes no 3 0.016108 30.569 1 0.58794 0.7771 NaN 1 Median NaN NaN NaN 0 0 Median 0.58794 0.7771 NaN 1 0 Median 11337000 7401700 3935200 0 0 0 11337000 7401700 3935200 1257 932 1353 2008 3252;3253 3252 2 IIDVVYNASNNELVR IHTVRVRGGCTRKTRIIDVVYNASNNELVR IIDVVYNASNNELVRTKTLVKNCIVLIDST R I I V R T 1 1 3 1 0 0 1 0 0 2 1 0 0 0 0 1 0 0 1 3 0 0 15 0 1717.8999 Q5JR95;Q5JR94;P62241 Q5JR95 58 72 RPS8 40S ribosomal protein S8 yes no 2 1.1506E-05 59.116 1 1 0.29116 0.40105 NaN 1 Median NaN NaN NaN 0 0 Median 0.29116 0.40105 NaN 1 0 Median 52912000 41043000 11870000 1397300 1397300 0 51515000 39646000 11870000 1258 785 1354 2009;2010 3254;3255 3254 2 IIEQLSPQAATSR DDLTSCTTSLRQINKIIEQLSPQAATSRDI NKIIEQLSPQAATSRDINRKLDSVKRQKYN K I I S R D 2 1 0 0 0 2 1 0 0 2 1 0 0 0 1 2 1 0 0 0 0 0 13 0 1412.7623 A0JP10;Q03468;D6R9X7;A8K4Q3 A0JP10 153 165 ERCC6;hCG_32740 DNA excision repair protein ERCC-6 yes no 2 1.0911E-122 170.11 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1259 298 1355 2011;2012 3256;3257;3258;3259;3260;3261;3262 3258 443 0 IIIENKPK LNNQARFILEKIDGKIIIENKPKKELIKVL LEKIDGKIIIENKPKKELIKVLIQRGYDSD K I I P K K 0 0 1 0 0 0 1 0 0 3 0 2 0 0 1 0 0 0 0 0 0 0 8 1 953.59097 P11388 P11388 1063 1070 TOP2A DNA topoisomerase 2-alpha yes yes 2;3 0.011575 58.604 2 0.72149 0.89214 1.4159 2 Median NaN NaN NaN 0 0 Median 0.72149 0.89214 1.4159 2 0 Median 39908000 23564000 16345000 0 0 0 39908000 23564000 16345000 1260 734 1356 2013;2014 3263;3264 3263 2 IIITVVEEQEQK RQFRTGRITVEKIIKIIITVVEEQEQKGRL IIKIIITVVEEQEQKGRLCFEGLRSLVPAA K I I Q K G 0 0 0 0 0 2 3 0 0 3 0 1 0 0 0 0 1 0 0 2 0 0 12 0 1427.7872 Q15149;D3DWL0 Q15149 3095 3106 PLEC;PLEC1 Plectin yes no 2 0.0048566 51.927 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 13099000 0 13099000 4534800 0 4534800 8564300 0 8564300 1261 822 1357 2015;2016 3265;3266 3266 2 IILDLISESPIK VLIGGKPDRVVECIKIILDLISESPIKGRA CIKIILDLISESPIKGRAQPYDPNFYDETY K I I I K G 0 0 0 1 0 0 1 0 0 4 2 1 0 0 1 2 0 0 0 0 0 0 12 0 1339.7963 Q5T6W2;B4DUQ1;B4DFF1;A0A024R228;Q5EC54;P61978 Q5T6W2 184 195 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K yes no 2 0.00028641 82.069 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1262 39 1358 2017 3267;3268 3267 36 0 IIPELVGSPTQSTSSR SIRNLKPKRLKSQTKIIPELVGSPTQSTSS IPELVGSPTQSTSSRTAYLGTHKTSAGISS K I I S R T 0 1 0 0 0 1 1 1 0 2 1 0 0 0 2 4 2 0 0 1 0 0 16 0 1670.8839 Q9NSI6;Q5R2U7;H7C409 Q9NSI6 1468 1483 BRWD1;WDR9 Bromodomain and WD repeat-containing protein 1 yes no 2 1.614E-71 124.68 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1263 938 1359 2018;2019 3269;3270;3271 3269 1658 0 IIVDELKQEVISTSSK AATGPSIKIWDLEGKIIVDELKQEVISTSS IVDELKQEVISTSSKAEPPQCTSLAWSADG K I I S K A 0 0 0 1 0 1 2 0 0 3 1 2 0 0 0 3 1 0 0 2 0 0 16 1 1787.988 E9KL35;P63244;H0YAF8;H0YAM7;J3KPE3;H0Y8W2;D6RAC2;D6REE5;H0Y9P0;D6RF23 E9KL35 265 280 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 3 0.02867 29.58 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3031100 0 3031100 0 0 0 3031100 0 3031100 1264 610 1360 2020 3272 3272 1 IIYDSDSESEETLQVK KEDDFKQKQPSKKKRIIYDSDSESEETLQV IYDSDSESEETLQVKNAKKPPEKLPVSSKP R I I V K N 0 0 0 2 0 1 3 0 0 2 1 1 0 0 0 3 1 0 1 1 0 0 16 0 1854.8735 E0CX09;D6RAD2;P35251 E0CX09 65 80 RFC1 Replication factor C subunit 1 yes no 2 4.2818E-26 115.8 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1265 596 1361 2021;2022 3273;3274;3275;3276 3276 890;891 0 IKADPDGPEAQAEACSGER ______________________________ PDGPEAQAEACSGERTYQELLVNQNPIAQP K I K E R T 4 1 0 2 1 1 3 2 0 1 0 1 0 0 2 1 0 0 0 0 0 0 19 1 1999.8905 J3QSY4;D6RC52;D6RCB9;Q9NX24 J3QSY4 4 22 NHP2 H/ACA ribonucleoprotein complex subunit 2 yes no 3 6.462E-07 51.234 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1266 598 1362 2023 3277 3277 892 0 IKDTCIQSPSK FSTNSTKSVPNSTRKIKDTCIQSPSKECQK STRKIKDTCIQSPSKECQKSHPKSVPVSSK K I K S K E 0 0 0 1 1 1 0 0 0 2 0 2 0 0 1 2 1 0 0 0 0 0 11 1 1275.6493 Q03188 Q03188 66 76 CENPC Centromere protein C yes yes 2 0.0090306 45.915 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1267 799 1363 2024 3278 3278 1995 0 IKIEPDSEKDEVK MDESDKRKCSRSPKKIKIEPDSEKDEVKGS KKIKIEPDSEKDEVKGSDAAKGADQNEMDI K I K V K G 0 0 0 2 0 0 3 0 0 2 0 3 0 0 1 1 0 0 0 1 0 0 13 2 1528.7985 F5GXF5;E7ETD6;Q12830 F5GXF5 1024 1036 BPTF Nucleosome-remodeling factor subunit BPTF yes no 3 0.019407 23.419 1 0.88503 1.278 NaN 1 Median NaN NaN NaN 0 0 Median 0.88503 1.278 NaN 1 0 Median 16304000 10062000 6242700 0 0 0 16304000 10062000 6242700 1268 607 1364 2025 3279 3279 1 IKNENTEGSPQEDGVELEGLK TIEMKAEAEKKNKKKIKNENTEGSPQEDGV EGSPQEDGVELEGLKQRLEKKQKREPGTKT K I K L K Q 0 0 2 1 0 1 5 3 0 1 2 2 0 0 1 1 1 0 0 1 0 0 21 1 2285.1023 P11388 P11388 1239 1259 TOP2A DNA topoisomerase 2-alpha yes yes 2;3 0 339.22 9 7 0.8068 1.0038 13.168 2 Median 0.74073 0.91457 NaN 1 0 Median 0.87876 1.1018 NaN 1 0 Median 23136000 12399000 10737000 8325400 4809200 3516200 14811000 7589700 7221000 1269 734 1365;1366;1367 2026;2027;2028;2029;2030;2031;2032;2033;2034;2035;2036;2037;2038;2039;2040;2041 3280;3281;3282;3283;3284;3285;3286;3287;3288;3289;3290;3291;3292;3293;3294;3295;3296;3297;3298;3299;3300;3301;3302;3303;3304;3305;3306;3307;3308;3309;3310;3311;3312;3313;3314;3315;3316 3286 1141;1961 4 IKPAATSHVEGSGGVSAK ______________________________ AATSHVEGSGGVSAKGKRKPRQEEDEDYRE R I K A K G 3 0 0 0 0 0 1 3 1 1 0 2 0 0 1 3 1 0 0 2 0 0 18 1 1694.8951 B4DES6;B7Z9P6;G3XAG1;Q96ME7 B4DES6 6 23 ZNF512 Zinc finger protein 512 yes no 3 2.786E-07 60.464 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1270 462 1368 2042;2043 3317;3318;3319 3318 671 0 IKSPESVPVDSNK TSPTNEKTQLGKECKIKSPESVPVDSNKDC CKIKSPESVPVDSNKDCTTPLEMFSNVEFK K I K N K D 0 0 1 1 0 0 1 0 0 1 0 2 0 0 2 3 0 0 0 2 0 0 13 1 1398.7355 A0A075B754;Q96QE3;H0UIC2 A0A075B754 84 96 ATAD5 ATPase family AAA domain-containing protein 5 yes no 2 1.2052E-05 95.981 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1271 177 1369 2044;2045 3320;3321;3322;3323;3324 3322 241 0 ILATDVSSKNTPDSK EATNRSVQAHEVHQKILATDVSSKNTPDSK ILATDVSSKNTPDSKKISSRNINDHHSEAD K I L S K K 1 0 1 2 0 0 0 0 0 1 1 2 0 0 1 3 2 0 0 1 0 0 15 1 1574.8152 Q03188;H0Y8J2 Q03188 120 134 CENPC Centromere protein C yes no 2 0.0022217 58.885 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1272 799 1370 2046 3325 3325 1305;1306 0 ILCKSPQSDPADTPTNTK PCTDNPTTDEKTTKKILCKSPQSDPADTPT KSPQSDPADTPTNTKQRPKRSLKKADVEEE K I L T K Q 1 0 1 2 1 1 0 0 0 1 1 2 0 0 3 2 3 0 0 0 0 0 18 1 1971.9572 P46013 P46013 1857 1874 MKI67 Antigen KI-67 yes yes 2;3 2.0833E-235 195.86 5 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1273 762 1371;1372;1373 2047;2048;2049;2050;2051;2052 3326;3327;3328;3329;3330;3331;3332;3333;3334;3335;3336;3337 3330 1211;1212;1976 0 ILDSVGIEADDDRLNK ALGGNSSPSAKDIKKILDSVGIEADDDRLN LDSVGIEADDDRLNKVISELNGKNIEDVIA K I L N K V 1 1 1 4 0 0 1 1 0 2 2 1 0 0 0 1 0 0 0 1 0 0 16 1 1771.8952 A0A024RCA7;P05387 A0A024RCA7 26 41 RPLP2 60S acidic ribosomal protein P2 yes no 3 0.0012538 37.583 1 0.60429 0.92109 NaN 1 Median NaN NaN NaN 0 0 Median 0.60429 0.92109 NaN 1 0 Median 29700000 17789000 11911000 0 0 0 29700000 17789000 11911000 1274 154 1374 2053 3338;3339 3338 2 ILESITVSSLMATPQDPK PTSDEESTPKKSKARILESITVSSLMATPQ SITVSSLMATPQDPKGQGVGTGRSASKLRI R I L P K G 1 0 0 1 0 1 1 0 0 2 2 1 1 0 2 3 2 0 0 1 0 0 18 0 1929.0129 Q9NQS7;B3KPD3 Q9NQS7 227 244 INCENP Inner centromere protein yes no 2 1.3669E-13 97.095 2 0.69576 0.87731 NaN 1 Median NaN NaN NaN 0 0 Median 0.69576 0.87731 NaN 1 0 Median 81812000 48651000 33161000 0 0 0 81812000 48651000 33161000 1275 932 1375;1376 2054;2055 3340;3341 3341 218 2043 1 ILIPSDIESSK KQKHCRRHKQTKKRRILIPSDIESSKSSTR KKRRILIPSDIESSKSSTRRMKSSCDRERS R I L S K S 0 0 0 1 0 0 1 0 0 3 1 1 0 0 1 3 0 0 0 0 0 0 11 0 1200.6602 Q6M1B8;A0A087WYW3;A0A024R2N6;P30414;Q6N014 Q6M1B8 159 169 DKFZp686J06106;NKTR;DKFZp686N24126 NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase yes no 2 0.00020554 70.488 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1276 49 1377 2056 3342 3342 50 0 ILITTSDRPHGR TDEFASYFNKQTSPKILITTSDRPHGRTVR SPKILITTSDRPHGRTVRLCEQLSTVIPNS K I L G R T 0 2 0 1 0 0 0 1 1 2 1 0 0 0 1 1 2 0 0 0 0 0 12 1 1364.7524 Q9H9Y2 Q9H9Y2 144 155 RPF1 Ribosome production factor 1 yes yes 4 0.0052647 36.847 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 5083000 5083000 0 0 0 0 5083000 5083000 0 1277 929 1378 2057 3343 3343 1 ILKSPEIQR YNLPMHKMINTDLSRILKSPEIQRALRAPR NTDLSRILKSPEIQRALRAPRKKIHRRVLK R I L Q R A 0 1 0 0 0 1 1 0 0 2 1 1 0 0 1 1 0 0 0 0 0 0 9 1 1082.6448 Q59GY2;P36578;H3BM89;B4DMJ6;B4DMJ2;Q53G74 Q59GY2 306 314 RPL4 60S ribosomal protein L4 yes no 2;3 1.2298E-27 126.71 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1278 755 1379 2058;2059;2060 3344;3345;3346;3347;3348;3349;3350;3351;3352 3346 1183 0 ILPKPTRK KKFSGKHVVFIAQRRILPKPTRKSRTKNKQ VFIAQRRILPKPTRKSRTKNKQKRPRSRTL R I L R K S 0 1 0 0 0 0 0 0 0 1 1 2 0 0 2 0 1 0 0 0 0 0 8 2 951.62294 P62081;B5MCP9 P62081 100 107 RPS7 40S ribosomal protein S7 yes no 2 0.027408 32.841 1 0.3258 0.46179 NaN 1 Median NaN NaN NaN 0 0 Median 0.3258 0.46179 NaN 1 0 Median 16463000 12776000 3686800 0 0 0 16463000 12776000 3686800 1279 784 1380 2061 3353 3353 1 ILSLQASPTQK PPASILKQITLPGNKILSLQASPTQKNRIK PGNKILSLQASPTQKNRIKENVTSCFRDED K I L Q K N 1 0 0 0 0 2 0 0 0 1 2 1 0 0 1 2 1 0 0 0 0 0 11 0 1184.6765 B4DYT3;J3KTH2;A4PBF7;Q92750 B4DYT3 335 345 TAF4B;taf4b Transcription initiation factor TFIID subunit 4B yes no 2 0.00057949 68.44 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1280 318 1381 2062 3354 3354 477 0 ILSPDSFIK PVHLESTIAHEIYQKILSPDSFIKDNYGLN HEIYQKILSPDSFIKDNYGLNQDLESESVN K I L I K D 0 0 0 1 0 0 0 0 0 2 1 1 0 1 1 2 0 0 0 0 0 0 9 0 1018.5699 B3KWI2;Q8IZT6 B3KWI2 365 373 ASPM Abnormal spindle-like microcephaly-associated protein yes no 2 0.0042205 48.44 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1281 450 1382 2063;2064 3355;3356;3357 3355 658 0 ILTFDQLALDSPK VTSRARSRILRAGGKILTFDQLALDSPKGC GKILTFDQLALDSPKGCGTVLLSGPRKGRE K I L P K G 1 0 0 2 0 1 0 0 0 1 3 1 0 1 1 1 1 0 0 0 0 0 13 0 1459.7922 F8VUA6;Q0QEW2;G3V203;H0YHA7;A0A024QZD1;J3QQ67;Q07020 F8VUA6 68 80 RPL18 60S ribosomal protein L18 yes no 2 6.2939E-05 86.944 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1282 4 1383 2065 3358;3359 3358 8 0 ILVPKSPVK LSSRKNMDLAKSGIKILVPKSPVKSRTAVD AKSGIKILVPKSPVKSRTAVDGFQSESPEK K I L V K S 0 0 0 0 0 0 0 0 0 1 1 2 0 0 2 1 0 0 0 2 0 0 9 1 979.643 Q9Y232 Q9Y232 196 204 CDYL Chromodomain Y-like protein yes yes 2 0.0028473 80.24 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1283 961 1384 2066 3360;3361 3360 1726 0 IMIMTDQDQDGSHIK NYEDEDSLKTLRYGKIMIMTDQDQDGSHIK IMIMTDQDQDGSHIKGLLINFIHHNWPSLL K I M I K G 0 0 0 3 0 2 0 1 1 3 0 1 2 0 0 1 1 0 0 0 0 0 15 0 1730.7968 P11388;Q02880;Q71UH4;B4DKD0;E9PCY5 P11388 536 550 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2-beta;DNA topoisomerase 2 no no 3 0.00014472 50.305 1 0.55848 0.70391 NaN 1 Median NaN NaN NaN 0 0 Median 0.55848 0.70391 NaN 1 0 Median 19708000 12038000 7669700 0 0 0 19708000 12038000 7669700 1284 734;796 1385 2067 3362 3362 161;162 1 IMLFTNEDNPHGNDSAK ANLFSDVQFKMSHKRIMLFTNEDNPHGNDS LFTNEDNPHGNDSAKASRARTKAGDLRDTG R I M A K A 1 0 3 2 0 0 1 1 1 1 1 1 1 1 1 1 1 0 0 0 0 0 17 0 1901.8578 B4DE32;B1AHC9;A0A024R1N4;P12956;B4E356 B4DE32 116 132 XRCC6 X-ray repair cross-complementing protein 6 yes no 3 6.3595E-09 88.133 1 0.44055 0.57596 NaN 1 Median NaN NaN NaN 0 0 Median 0.44055 0.57596 NaN 1 0 Median 6618100 4892700 1725400 0 0 0 6618100 4892700 1725400 1285 33 1386 2068 3363;3364 3363 4 2 IPCDSPQSDPVDTPTSTK PGHTEELVAAGKTTKIPCDSPQSDPVDTPT DSPQSDPVDTPTSTKQRPKRSIRKADVEGE K I P T K Q 0 0 0 3 1 1 0 0 0 1 0 1 0 0 4 3 3 0 0 1 0 0 18 0 1943.8782 P46013 P46013 1249 1266 MKI67 Antigen KI-67 yes yes 2 0 248.91 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1286 762 1387;1388 2069;2070;2071;2072 3365;3366;3367;3368;3369;3370;3371;3372;3373;3374;3375;3376;3377;3378;3379;3380;3381 3377 1213;1214 0 IPCESPPLEVVDTTASTK SGHTQESLTAGKATKIPCESPPLEVVDTTA ESPPLEVVDTTASTKRHLRTRVQKVQVKEE K I P T K R 1 0 0 1 1 0 2 0 0 1 1 1 0 0 3 2 3 0 0 2 0 0 18 0 1942.9558 P46013 P46013 2704 2721 MKI67 Antigen KI-67 yes yes 2;3 3.5029E-52 129.88 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1287 762 1389 2073;2074;2075 3382;3383;3384;3385;3386 3383 1215 0 IPCESPPLEVVDTTASTKR SGHTQESLTAGKATKIPCESPPLEVVDTTA SPPLEVVDTTASTKRHLRTRVQKVQVKEEP K I P K R H 1 1 0 1 1 0 2 0 0 1 1 1 0 0 3 2 3 0 0 2 0 0 19 1 2099.0569 P46013 P46013 2704 2722 MKI67 Antigen KI-67 yes yes 3 1.1168E-18 101.28 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1288 762 1390 2076;2077 3387;3388;3389 3388 1215 0 IPCKSPPPELTDTATSTK PGHTEESMTIDKNTKIPCKSPPPELTDTAT KSPPPELTDTATSTKRCPKTRPRKEVKEEL K I P T K R 1 0 0 1 1 0 1 0 0 1 1 2 0 0 4 2 4 0 0 0 0 0 18 1 1941.9717 P46013 P46013 2584 2601 MKI67 Antigen KI-67 yes yes 2;3 8.7942E-208 191.2 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1289 762 1391 2078;2079;2080;2081 3390;3391;3392;3393;3394;3395;3396;3397 3393 1216 0 IPCKSPPPELTDTATSTKR PGHTEESMTIDKNTKIPCKSPPPELTDTAT SPPPELTDTATSTKRCPKTRPRKEVKEELS K I P K R C 1 1 0 1 1 0 1 0 0 1 1 2 0 0 4 2 4 0 0 0 0 0 19 2 2098.0729 P46013 P46013 2584 2602 MKI67 Antigen KI-67 yes yes 3 1.0238E-05 43.696 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1290 762 1392 2082 3398 3398 1216 0 IPCKSSPELEDTATSSK AGHTEESMTDDKTTKIPCKSSPELEDTATS CKSSPELEDTATSSKRRPRTRAQKVEVKEE K I P S K R 1 0 0 1 1 0 2 0 0 1 1 2 0 0 2 4 2 0 0 0 0 0 17 1 1848.8775 P46013 P46013 2823 2839 MKI67 Antigen KI-67 yes yes 2 1.1829E-07 67.685 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1291 762 1393 2083 3399 3399 1217;1218 0 IPEQIIVVDSSMVENEVIK VLTLFSLGLISVDVRIPEQIIVVDSSMVEN IIVVDSSMVENEVIKSLGKDGSLEDDEDEE R I P I K S 0 0 1 1 0 1 3 0 0 4 0 1 1 0 1 2 0 0 0 4 0 0 19 0 2141.129 Q6AHZ7;Q6AWA4;Q12789 Q6AHZ7 1586 1604 DKFZp686A111;DKFZp686O0870;GTF3C1 General transcription factor 3C polypeptide 1 yes no 2 4.3121E-06 55.173 1 1.12 1.3957 NaN 1 Median NaN NaN NaN 0 0 Median 1.12 1.3957 NaN 1 0 Median 33269000 15788000 17481000 0 0 0 33269000 15788000 17481000 1292 805 1394 2084 3400 3400 192 1 IPQCSQLQEDVDPQK VRKQSSFILTPPRRKIPQCSQLQEDVDPQK IPQCSQLQEDVDPQKVAFLLHKQWTLYSLT K I P Q K V 0 0 0 2 1 4 1 0 0 1 1 1 0 0 2 1 0 0 0 1 0 0 15 0 1783.8411 A0A024R932;Q8N0S6 A0A024R932 49 63 C1orf155;CENPL Centromere protein L yes no 2 0.00016333 51.875 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1293 110 1395 2085 3401 3401 162 0 IPYPGRSPQDLASTSR AKTYEFRSDSARGIRIPYPGRSPQDLASTS PYPGRSPQDLASTSRAREGLRNMGLSPPAS R I P S R A 1 2 0 1 0 1 0 1 0 1 1 0 0 0 3 3 1 0 1 0 0 0 16 1 1743.8904 Q9HC52;C9JM54;C9J6K3 Q9HC52 104 119 CBX8 Chromobox protein homolog 8 yes no 3 4.4846E-06 66.12 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1294 930 1396 2086;2087 3402;3403;3404;3405;3406;3407 3403 1627;2072 0 IPYTTVLR YPTFLHLHGKTFDYKIPYTTVLRLFLLPHK GKTFDYKIPYTTVLRLFLLPHKDQRQMFFV K I P L R L 0 1 0 0 0 0 0 0 0 1 1 0 0 0 1 0 2 0 1 1 0 0 8 0 961.55967 A0A024R4Z6;Q08945;E9PMD4 A0A024R4Z6 234 241 SSRP1 FACT complex subunit SSRP1 yes no 2 0.019669 55.676 1 0.65453 0.82006 NaN 1 Median NaN NaN NaN 0 0 Median 0.65453 0.82006 NaN 1 0 Median 4315500 2525300 1790300 0 0 0 4315500 2525300 1790300 1295 65 1397 2088 3408 3408 1 IQAQFGPLAQLSPQER QTQEYFIIQYQESLRIQAQFGPLAQLSPQE QAQFGPLAQLSPQERLSRETALQQKQVSLE R I Q E R L 2 1 0 0 0 4 1 1 0 1 2 0 0 1 2 1 0 0 0 0 0 0 16 0 1781.9424 Q8WW55;Q59H39;P51692 Q8WW55 182 197 STAT5B Signal transducer and activator of transcription;Signal transducer and activator of transcription 5B yes no 2 8.6291E-06 58.98 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1296 773 1398 2089 3409 3409 1257 0 IQDPTEDAEAEDTPR DSGNVNGKKRNHTKRIQDPTEDAEAEDTPR IQDPTEDAEAEDTPRKRLRTDKHSLRKRDT R I Q P R K 2 1 0 3 0 1 3 0 0 1 0 0 0 0 2 0 2 0 0 0 0 0 15 0 1685.738 Q05CW4;H0Y9L4;O96028 O96028 532 546 WHSC1 Histone-lysine N-methyltransferase NSD2 no no 2 0.0094567 43.592 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1297 724;800 1399 2090 3410 3410 1955 0 IQDWYDKK KVQALEEANNDLENKIQDWYDKKGPAAIQK NNDLENKIQDWYDKKGPAAIQKNYSPYYNT K I Q K K G 0 0 0 2 0 1 0 0 0 1 0 2 0 0 0 0 0 1 1 0 0 0 8 1 1094.5397 CON__P35527;P35527 CON__P35527 185 192 KRT9 Keratin, type I cytoskeletal 9 yes no 2 0.010101 53.775 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 4824300 4824300 0 0 0 0 4824300 4824300 0 + 1298 582 1400 2091 3411 3411 1 IQIISTDSAVASPQR ______________________________ IQIISTDSAVASPQRIQGSEPASGPLSVFT R I Q Q R I 2 1 0 1 0 2 0 0 0 3 0 0 0 0 1 3 1 0 0 1 0 0 15 0 1584.8471 C9JKS0;F2YGU2;P49116;C9JMI6;Q6PHZ7;C9J2Y1 C9JKS0 8 22 NR2C2 Nuclear receptor subfamily 2 group C member 2 yes no 2 8.6105E-05 53.395 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1299 562 1401 2092 3412 3412 843 0 IQIVTAVDASGSPK LNKEKIVTDQQTGQKIQIVTAVDASGSPKQ KIQIVTAVDASGSPKQQFILTSPDGAGTGK K I Q P K Q 2 0 0 1 0 1 0 1 0 2 0 1 0 0 1 2 1 0 0 2 0 0 14 0 1384.7562 C9JKS0;F2YGU2;P49116;C9JMI6;Q6PHZ7 C9JKS0 54 67 NR2C2 Nuclear receptor subfamily 2 group C member 2 yes no 2 1.7195E-10 102.78 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1300 562 1402 2093;2094 3413;3414;3415 3413 844;845 0 IRAEEEDLAAVPFLASDNEEEEDEK SGIDCKIHGLILLGRIRAEEEDLAAVPFLA VPFLASDNEEEEDEKGNSGSLIRKKAAGLE R I R E K G 4 1 1 3 0 0 8 0 0 1 2 1 0 1 1 1 0 0 0 1 0 0 25 1 2847.2934 A8KAQ8;A0A0J9YVP0;O95714 A8KAQ8 380 404 HERC2 E3 ubiquitin-protein ligase HERC2 yes no 3 1.2556E-08 48.694 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1301 258 1403 2095 3416 3416 354 0 IRDSEYEIQR SEGQERKPSGSSQNRIRDSEYEIQRQAKKS SSQNRIRDSEYEIQRQAKKSFSTLFLETVK R I R Q R Q 0 2 0 1 0 1 2 0 0 2 0 0 0 0 0 1 0 0 1 0 0 0 10 1 1307.647 Q03188;H0Y8J2 Q03188 247 256 CENPC Centromere protein C yes no 3 0.011405 45.433 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 7885600 7885600 0 0 0 0 7885600 7885600 0 1302 799 1404 2096 3417 3417 1 IREQEPARR ESLQNGRKSTEFPRKIREQEPARRVSRSSF TEFPRKIREQEPARRVSRSSFSSDPDEKAQ K I R R R V 1 3 0 0 0 1 2 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 9 2 1153.6316 P46013;Q70L73 P46013 115 123 MKI67 Antigen KI-67 no no 3 0.018656 30.612 1 0.80491 1.0471 NaN 1 Median 0.80491 1.0471 NaN 1 0 Median NaN NaN NaN 0 0 Median 6044400 3023500 3020800 6044400 3023500 3020800 0 0 0 1303 762;865 1405 2097 3418 3418 1 IREQEYYLVK NLYDFEVEYLCDYKKIREQEYYLVKWRGYP CDYKKIREQEYYLVKWRGYPDSESTWEPRQ K I R V K W 0 1 0 0 0 1 2 0 0 1 1 1 0 0 0 0 0 0 2 1 0 0 10 1 1339.7136 O43463 O43463 54 63 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 yes yes 2 0.027202 37.344 1 0.60285 0.79757 NaN 1 Median NaN NaN NaN 0 0 Median 0.60285 0.79757 NaN 1 0 Median 8708800 4961400 3747400 0 0 0 8708800 4961400 3747400 1304 701 1406 2098 3419 3419 1 IRLENEIQTYR TECQNTEYQQLLDIKIRLENEIQTYRSLLE LDIKIRLENEIQTYRSLLEGEGSSGGGGRG K I R Y R S 0 2 1 0 0 1 2 0 0 2 1 0 0 0 0 0 1 0 1 0 0 0 11 1 1433.7627 CON__P13645;P13645 CON__P13645 440 450 KRT10 Keratin, type I cytoskeletal 10 yes no 3 0.011806 61.165 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 139470000 139470000 0 2526200 2526200 0 136950000 136950000 0 + 1305 579 1407 2099;2100 3420;3421 3421 2 IRLESEEEGVPSTAIR KGRHKTTGQVVAMKKIRLESEEEGVPSTAI RLESEEEGVPSTAIREISLLKELRHPNIVS K I R I R E 1 2 0 0 0 0 4 1 0 2 1 0 0 0 1 2 1 0 0 1 0 0 16 1 1784.9268 B7Z3D6;E5RIU6;A0A087WZZ9;I6L9I5;A0A024QZJ8;A0A024QZP7;Q5H9N4;P06493 B7Z3D6 35 50 CDK1;CDC2;DKFZp686L20222 Cyclin-dependent kinase 1 yes no 3 0.022966 22.646 1 1.1051 1.6903 NaN 1 Median NaN NaN NaN 0 0 Median 1.1051 1.6903 NaN 1 0 Median 11069000 5672700 5396800 0 0 0 11069000 5672700 5396800 1306 6 1408 2101 3422 3422 1 IRTPSYSPTQR TSGSCYYHVISKVPRIRTPSYSPTQRSPGC KVPRIRTPSYSPTQRSPGCRPLPSAGSPTP R I R Q R S 0 2 0 0 0 1 0 0 0 1 0 0 0 0 2 2 2 0 1 0 0 0 11 1 1304.6837 Q03164 Q03164 2145 2155 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes yes 2 0.0010834 68.44 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1307 798 1409;1410 2102;2103;2104 3423;3424;3425;3426 3425 1284;1285;1992 0 IRTSPTFR KKAVLKGVHSHKKKKIRTSPTFRRPKTLRL HSHKKKKIRTSPTFRRPKTLRLRRQPKYPR K I R F R R 0 2 0 0 0 0 0 0 0 1 0 0 0 1 1 1 2 0 0 0 0 0 8 1 976.54541 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750 H7BY10 42 49 RPL23A 60S ribosomal protein L23a yes no 2 4.6844E-37 130.09 5 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1308 385 1411 2105;2106;2107;2108;2109 3427;3428;3429;3430;3431;3432;3433;3434 3430 587;1863 0 IRYESLTDPSK FLRELISNASDALDKIRYESLTDPSKLDSG ALDKIRYESLTDPSKLDSGKELKIDIIPNP K I R S K L 0 1 0 1 0 0 1 0 0 1 1 1 0 0 1 2 1 0 1 0 0 0 11 1 1307.6721 Q2VPJ6;K9JA46;P07900;Q58FF6;O14942;G3V2J8;B4DTA5;Q86SX1;Q58FF8;A0A024RD80;P08238;B4DMA2;Q6PK50;Q58FF7 A0A024RD80 54 64 HSP90AA1;EL52;HSP90AB4P;HSP90AB2P;HSP90AB1;HSP90AB3P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-beta 4;Putative heat shock protein HSP 90-beta 2;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 no no 2;3 0.00017582 69.864 2 4.5868 6.8039 10.919 2 Median NaN NaN NaN 0 0 Median 4.5868 6.8039 10.919 2 0 Median 45403000 8763400 36639000 0 0 0 45403000 8763400 36639000 1309 167;688 1412 2110;2111 3435;3436 3436 2 ISELEFHTDK HIIRVYFFGSGQPEKISELEFHTDKVDSIQ GQPEKISELEFHTDKVDSIQFSNTSNRFVS K I S D K V 0 0 0 1 0 0 2 0 1 1 1 1 0 1 0 1 1 0 0 0 0 0 10 0 1217.5928 Q8WWQ0 Q8WWQ0 358 367 PHIP PH-interacting protein yes yes 2 0.00075008 72.643 1 0.70938 0.88802 NaN 1 Median NaN NaN NaN 0 0 Median 0.70938 0.88802 NaN 1 0 Median 9091000 5127200 3963800 0 0 0 9091000 5127200 3963800 1310 894 1413 2112 3437;3438 3437 2 ISGLIYEETR KPAIRRLARRGGVKRISGLIYEETRGVLKV GGVKRISGLIYEETRGVLKVFLENVIRDAV R I S T R G 0 1 0 0 0 0 2 1 0 2 1 0 0 0 0 1 1 0 1 0 0 0 10 0 1179.6136 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 47 56 HIST1H4H;HIST1H4A Histone H4 yes no 2 1.7505E-30 128.86 1 4 0.55876 0.74788 8.8339 4 Median 0.72362 0.88599 NaN 1 0 Median 0.55167 0.74026 1.421 3 0 Median 665790000 438970000 226820000 100340000 57239000 43098000 565460000 381730000 183720000 1311 400 1414 2113;2114;2115;2116;2117 3439;3440;3441;3442;3443;3444;3445;3446;3447;3448;3449;3450;3451 3446 13 ISGLIYEETRGVLK KPAIRRLARRGGVKRISGLIYEETRGVLKV RISGLIYEETRGVLKVFLENVIRDAVTYTE R I S L K V 0 1 0 0 0 0 2 2 0 2 2 1 0 0 0 1 1 0 1 1 0 0 14 1 1576.8825 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 47 60 HIST1H4H;HIST1H4A Histone H4 yes no 3 0.0038603 37.555 1 1.1815 1.7694 NaN 1 Median NaN NaN NaN 0 0 Median 1.1815 1.7694 NaN 1 0 Median 24955000 12393000 12562000 0 0 0 24955000 12393000 12562000 1312 400 1415 2118 3452 3452 1 ISINQTPGK QREVSRSQDQFSDMRISINQTPGKSLDFGF QFSDMRISINQTPGKSLDFGFTIKWDIPGI R I S G K S 0 0 1 0 0 1 0 1 0 2 0 1 0 0 1 1 1 0 0 0 0 0 9 0 956.5291 E9PMS6;B7Z8W3;A0A1P7ZIM8;A0A0A0MTE2;E9PMT2;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMP7;H0Y424;H0YDG6 E9PMS6 608 616 LMO7 LIM domain only protein 7 yes no 2 0.010364 66.595 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1313 227 1416 2119;2120 3453;3454 3454 1818 0 ISPDLNIK SAGGQNAENLCQFFKISPDLNIKCERKDDF NLCQFFKISPDLNIKCERKDDFLGAAEGKL K I S I K C 0 0 1 1 0 0 0 0 0 2 1 1 0 0 1 1 0 0 0 0 0 0 8 0 898.51238 E9PEI0;Q69YH5;B3KRS8 E9PEI0 740 747 CDCA2 Cell division cycle-associated protein 2 yes no 2 1.3509E-05 98.048 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1314 615 1417 2121;2122 3455;3456;3457;3458 3456 933 0 ISSLLEEQFQQGK KKIQKKYDERKKNAKISSLLEEQFQQGKLL AKISSLLEEQFQQGKLLACIASRPGQCGRA K I S G K L 0 0 0 0 0 3 2 1 0 1 2 1 0 1 0 2 0 0 0 0 0 0 13 0 1505.7726 Q5JR95;Q5JR94;P62241;Q9BS10 Q5JR95 138 150 RPS8 40S ribosomal protein S8 yes no 2 2.5299E-102 162.36 1 2 0.28516 0.35296 NaN 1 Median NaN NaN NaN 0 0 Median 0.28516 0.35296 NaN 1 0 Median 26575000 20303000 6271500 0 0 0 26575000 20303000 6271500 1315 785 1418;1419 2123;2124;2125 3459;3460;3461 3461 1264 1 ISVYYNEATGGK PTGTYHGDSDLQLDRISVYYNEATGGKYVP LDRISVYYNEATGGKYVPRAILVDLEPGTY R I S G K Y 1 0 1 0 0 0 1 2 0 1 0 1 0 0 0 1 1 0 2 1 0 0 12 0 1300.6299 B4DMU8;B7ZAF0;Q5JP53;Q6LC01;Q5SU16;B4DY90;P07437;B4DMJ5 B4DMU8 47 58 TUBB Tubulin beta chain yes no 2 0.02585 36.528 1 4.289 5.4776 NaN 1 Median NaN NaN NaN 0 0 Median 4.289 5.4776 NaN 1 0 Median 10960000 2651900 8308500 0 0 0 10960000 2651900 8308500 1316 484 1420 2126 3462 3462 0 ISYIPDEEVSSPSPPQR MEKLSGHQFENYSFKISYIPDEEVSSPSPP YIPDEEVSSPSPPQRAQRGDHSSREQGHAP K I S Q R A 0 1 0 1 0 1 2 0 0 2 0 0 0 0 4 4 0 0 1 1 0 0 17 0 1899.9214 F8W930;Q9Y6M1 F8W930 158 174 IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 2 yes no 2 6.3509E-07 60.209 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1317 638 1421;1422 2127;2128 3463;3464 3464 969;970 0 ISYQRDSDENLTDAEGK QQSGFPAVLSSKRRRISYQRDSDENLTDAE YQRDSDENLTDAEGKVIGLQIFNIDTDRAC R I S G K V 1 1 1 3 0 1 2 1 0 1 1 1 0 0 0 2 1 0 1 0 0 0 17 1 1939.8759 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 189 205 CDCA2 Cell division cycle-associated protein 2 yes no 3 8.7831E-06 49.528 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1318 615 1423 2129 3465 3465 934 0 ISYVQDENRDPIR MPKTPSQKNRRKKRRISYVQDENRDPIRRR RRISYVQDENRDPIRRRLSRRKSRSSQLSS R I S I R R 0 2 1 2 0 1 1 0 0 2 0 0 0 0 1 1 0 0 1 1 0 0 13 1 1603.7954 Q9NQS7;B3KPD3;E9PM67 Q9NQS7 71 83 INCENP Inner centromere protein yes no 3 5.3264E-05 69.03 1 2 0.5444 0.87156 35.753 2 Median NaN NaN NaN 0 0 Median 0.5444 0.87156 35.753 2 0 Median 48428000 29178000 19250000 0 0 0 48428000 29178000 19250000 1319 932 1424;1425 2130;2131;2132 3466;3467;3468 3467 2073 1 ITEVSCKSPQPDPVK FQTPGHTEESMTDDKITEVSCKSPQPDPVK ITEVSCKSPQPDPVKTPTSSKQRLKISLGK K I T V K T 0 0 0 1 1 1 1 0 0 1 0 2 0 0 3 2 1 0 0 2 0 0 15 1 1683.8502 P46013 P46013 1976 1990 MKI67 Antigen KI-67 yes yes 2;3 0 223.76 4 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1320 762 1426 2133;2134;2135;2136;2137;2138 3469;3470;3471;3472;3473;3474;3475;3476;3477;3478;3479;3480;3481 3471 1219 0 ITEVSCKSPQPESFK FQTPGHTEESMTDDKITEVSCKSPQPESFK ITEVSCKSPQPESFKTSRSSKQRLKIPLVK K I T F K T 0 0 0 0 1 1 2 0 0 1 0 2 0 1 2 3 1 0 0 1 0 0 15 1 1735.8451 P46013 P46013 2459 2473 MKI67 Antigen KI-67 yes yes 2;3 1.9353E-150 175.56 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1321 762 1427 2139;2140;2141;2142 3482;3483;3484;3485;3486;3487;3488;3489;3490;3491;3492 3484 1220 0 IVAETMNNYLFGER KGYAFVEFESEDVAKIVAETMNNYLFGERL KIVAETMNNYLFGERLLECHFMPPEKVHKE K I V E R L 1 1 2 0 0 0 2 1 0 1 1 0 1 1 0 0 1 0 1 1 0 0 14 0 1655.7977 Q9BYG3;B4DSM4;C9J6C5 Q9BYG3 101 114 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein yes no 2 0.0022918 45.433 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2781900 2781900 0 0 0 0 2781900 2781900 0 1322 922 1428 2143 3493 3493 215 1 IVDQIRPDR ADRMLDMGFEPQIRKIVDQIRPDRQTLMWS EPQIRKIVDQIRPDRQTLMWSATWPKEVRQ K I V D R Q 0 2 0 2 0 1 0 0 0 2 0 0 0 0 1 0 0 0 0 1 0 0 9 1 1110.6146 Q59F66;Q92841;J3QSF1;J3KRZ1;Q7Z2V5;Q59E92;B4DNG2;B4DN41;J3KTA4;B5BUE6;P17844 Q59F66 344 352 DDX17;DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX17;Probable ATP-dependent RNA helicase DDX5 yes no 3 0.017554 37.344 1 1.5627 2.5826 NaN 1 Median NaN NaN NaN 0 0 Median 1.5627 2.5826 NaN 1 0 Median 18938000 7617900 11320000 0 0 0 18938000 7617900 11320000 1323 840 1429 2144 3494 3494 1 IVEYSPPSAPR GTPASASALPEPKVRIVEYSPPSAPRRPPV PKVRIVEYSPPSAPRRPPVYYKFIEKSAEE R I V P R R 1 1 0 0 0 0 1 0 0 1 0 0 0 0 3 2 0 0 1 1 0 0 11 0 1214.6295 Q86X06;A0A024R4V5;A0A024R4W4;O95696;B4E3L9 Q86X06 124 134 BRD1 Bromodomain-containing protein 1 yes no 2 1.5379E-13 109.6 1 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1324 64 1430;1431 2145;2146;2147 3495;3496;3497;3498;3499;3500;3501;3502 3495 70;71 0 IVPQSQVPNPESPGK SHGNSAFQPIASSCKIVPQSQVPNPESPGK IVPQSQVPNPESPGKSFQPITMSCKIVSGS K I V G K S 0 0 1 0 0 2 1 1 0 1 0 1 0 0 4 2 0 0 0 2 0 0 15 0 1575.8257 Q9ULM3 Q9ULM3 436 450 YEATS2 YEATS domain-containing protein 2 yes yes 2 1.673E-06 78.285 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1325 957 1432 2148;2149 3503;3504;3505 3505 1717 0 IVRGDQPAASGDSDDDEPPPLPR LNLLLLGLCIFLLYKIVRGDQPAASGDSDD ASGDSDDDEPPPLPRLKRRDFTPAELRRFD K I V P R L 2 2 0 5 0 1 1 2 0 1 1 0 0 0 5 2 0 0 0 1 0 0 23 1 2403.1302 Q6IB11;O00264 Q6IB11 45 67 PGRMC1 Membrane-associated progesterone receptor component 1 yes no 3 1.5333E-18 89.663 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1326 694 1433 2150 3506 3506 1022 0 IVSGSPISTPSPSPLPR ESPGKSFQPITMSCKIVSGSPISTPSPSPL SGSPISTPSPSPLPRTPTSTPVHVKQGTAG K I V P R T 0 1 0 0 0 0 0 1 0 2 1 0 0 0 5 5 1 0 0 1 0 0 17 0 1690.9254 Q9ULM3 Q9ULM3 461 477 YEATS2 YEATS domain-containing protein 2 yes yes 2 0.0001844 44.734 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1327 957 1434 2151 3507 3507 1718;1719;2056 0 IYISNTFSPSK QEAIKKPLTQKRKLRIYISNTFSPSKAEGD RKLRIYISNTFSPSKAEGDSAGTAGTPGGT R I Y S K A 0 0 1 0 0 0 0 0 0 2 0 1 0 1 1 3 1 0 1 0 0 0 11 0 1255.6449 J3KMX2;B9EGA3;Q92925 J3KMX2 121 131 SMARCD2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 yes no 2 3.9765E-99 163.51 1 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1328 552 1435 2152;2153;2154 3508;3509;3510;3511 3508 809;810 0 IYNISGNGSPLADSK VFKTPGLRTPAAGERIYNISGNGSPLADSK IYNISGNGSPLADSKEIFLTVPVGGGESLR R I Y S K E 1 0 2 1 0 0 0 2 0 2 1 1 0 0 1 3 0 0 1 0 0 0 15 0 1534.7627 Q53HL2 Q53HL2 211 225 CDCA8 Borealin yes yes 2 2.8995E-59 140.49 1 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1329 837 1436 2155;2156;2157 3512;3513;3514;3515;3516;3517;3518;3519;3520;3521;3522;3523 3516 1385 0 IYPGHGR ______________________________ LCSFSGYKIYPGHGRRYARTDGKVFQFLNA K I Y G R R 0 1 0 0 0 0 0 2 1 1 0 0 0 0 1 0 0 0 1 0 0 0 7 0 798.41367 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 13 19 RPL24;HEL-S-310 60S ribosomal protein L24 yes no 2 0.02159 77.944 1 0.48813 0.67872 NaN 1 Median NaN NaN NaN 0 0 Median 0.48813 0.67872 NaN 1 0 Median 68251000 47376000 20874000 0 0 0 68251000 47376000 20874000 1330 563 1437 2158 3524 3524 1 IYQYIQSR IKIVDFGSSCQLGQRIYQYIQSRFYRSPEV SCQLGQRIYQYIQSRFYRSPEVLLGMPYDL R I Y S R F 0 1 0 0 0 2 0 0 0 2 0 0 0 0 0 1 0 0 2 0 0 0 8 0 1069.5556 Q15446;B4DXU2;B4DX02;A0A024R0J6;A0A024R0M8;B3KQI0;A0A024R0I0;Q9Y463;Q13627 Q15446 34 41 DYRK1B;DYRK1A Dual specificity tyrosine-phosphorylation-regulated kinase 1B;Dual specificity tyrosine-phosphorylation-regulated kinase 1A yes no 2 0.00083557 73.248 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1331 18 1438 2159;2160 3525;3526;3527 3526 2064 0 IYSMSLR IFSNSKAYTPSKRSRIYSMSLRLSAFFEEH YTPSKRSRIYSMSLRLSAFFEEHISSVLSD R I Y L R L 0 1 0 0 0 0 0 0 0 1 1 0 1 0 0 2 0 0 1 0 0 0 7 0 868.44767 Q8WWQ0;Q9NWP3 Q8WWQ0 1403 1409 PHIP PH-interacting protein yes no 2 0.023487 57.859 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1332 894 1439 2161 3528 3528 206 1504 0 IYSYMSPNK KPRTDGENVFTGQSKIYSYMSPNKCSGMRF FTGQSKIYSYMSPNKCSGMRFPLQEENSVT K I Y N K C 0 0 1 0 0 0 0 0 0 1 0 1 1 0 1 2 0 0 2 0 0 0 9 0 1101.5165 E3VVS3;A0A0C4DFR3;Q9NQR1;C9JKQ0 E3VVS3 24 32 SETD8 N-lysine methyltransferase SETD8 yes no 2 0.00055092 77.744 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1333 239 1440 2162 3529;3530;3531;3532 3531 50 332 0 KADIDLTK AIKGVGRRYAHVVLRKADIDLTKRAGELTE YAHVVLRKADIDLTKRAGELTEDEVERVIT R K A T K R 1 0 0 2 0 0 0 0 0 1 1 2 0 0 0 0 1 0 0 0 0 0 8 1 902.5073 P62269 P62269 47 54 RPS18 40S ribosomal protein S18 yes yes 2 0.0020958 66.962 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 13976000 13976000 0 0 0 0 13976000 13976000 0 1334 787 1441 2163 3533 3533 1 KADTTTPTPTAILAPGSPASPPGSLEPK APPAQPLAKKKGVKRKADTTTPTPTAILAP APGSPASPPGSLEPKAARLPPMRRESGRPI R K A P K A 4 0 0 1 0 0 1 2 0 1 2 2 0 0 7 3 5 0 0 0 0 0 28 1 2701.4174 U3KQA6;A0A0G2JHL0;A0A140T9F7;A0A140T9V2;X5CF57;A0A024RCR5;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;H0YDJ7;U3KPW0;E9PIQ3 U3KQA6 282 309 BRD2 Bromodomain-containing protein 2 yes no 3 3.1884E-06 42.708 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1335 161 1442 2164 3534 3534 222;223 0 KADVEEEFLALR DTPTSTKQWPKRSLRKADVEEEFLALRKLT SLRKADVEEEFLALRKLTPSAGKAMLTPKP R K A L R K 2 1 0 1 0 0 3 0 0 0 2 1 0 1 0 0 0 0 0 1 0 0 12 1 1418.7405 P46013 P46013 1153 1164 MKI67 Antigen KI-67 yes no 3 0.0016238 58.098 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 8456400 8456400 0 0 0 0 8456400 8456400 0 1336 762 1443 2165 3535 3535 1 KADVEEESLALRK GTPTIFKPQSKRSLRKADVEEESLALRKRT LRKADVEEESLALRKRTPSVGKAMDTPKPA R K A R K R 2 1 0 1 0 0 3 0 0 0 2 2 0 0 0 1 0 0 0 1 0 0 13 2 1486.7991 P46013 P46013 2245 2257 MKI67 Antigen KI-67 yes yes 3 0.0037016 38.376 1 1 0.79861 1.0426 5.5041 2 Median 0.90753 1.084 NaN 1 0 Median 0.70276 1.0028 NaN 1 0 Median 55488000 33339000 22150000 14477000 7943600 6533000 41012000 25395000 15617000 1337 762 1444 2166;2167 3536;3537;3538 3538 3 KAEAGAGSATEFQFR RDTYRRSAVPPGADKKAEAGAGSATEFQFR KAEAGAGSATEFQFRGGFGRGRGQPPQ___ K K A F R G 4 1 0 0 0 1 2 2 0 0 0 1 0 2 0 1 1 0 0 0 0 0 15 1 1568.7583 Q59GE4;P46783;Q9NQ39 Q59GE4 148 162 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like yes no 3 3.3616E-07 82.837 1 1 0.90579 1.2822 26.677 2 Median 0.81632 1.0618 NaN 1 0 Median 1.0051 1.5484 NaN 1 0 Median 55113000 25045000 30067000 15857000 7665200 8191400 39256000 17380000 21876000 1338 765 1445 2168;2169 3539;3540;3541;3542;3543;3544 3543 6 KAEAVVNTVDISER RKKRRMLKRLEQTRKKAEAVVNTVDISERE KKAEAVVNTVDISEREKVAQLRSLYKKAGL K K A E R E 2 1 1 1 0 0 2 0 0 1 0 1 0 0 0 1 1 0 0 3 0 0 14 1 1529.8049 B4DKU3;Q8IY81 B4DKU3 642 655 FTSJ3 pre-rRNA processing protein FTSJ3 yes no 2;3 3.6428E-06 70.197 1 2 0.51389 0.78956 16.607 3 Median 0.75818 0.98063 NaN 1 0 Median 0.51252 0.74745 7.7502 2 0 Median 69241000 41593000 27648000 12166000 6458900 5707300 57075000 35134000 21940000 1339 474 1446 2170;2171;2172 3545;3546;3547;3548 3548 4 KAEAVVNTVDISEREK RKKRRMLKRLEQTRKKAEAVVNTVDISERE AEAVVNTVDISEREKVAQLRSLYKKAGLGK K K A E K V 2 1 1 1 0 0 3 0 0 1 0 2 0 0 0 1 1 0 0 3 0 0 16 2 1786.9425 B4DKU3;Q8IY81 B4DKU3 642 657 FTSJ3 pre-rRNA processing protein FTSJ3 yes no 3 0.00021219 47.916 1 1 0.63828 0.83248 12.366 2 Median 0.7609 0.90855 NaN 1 0 Median 0.53541 0.76278 NaN 1 0 Median 51903000 30543000 21361000 18898000 10712000 8186000 33006000 19831000 13175000 1340 474 1447 2173;2174 3549;3550;3551;3552;3553 3552 5 KAEDLFQDAYYQSPETR AIREGTNQHHRALGKKAEDLFQDAYYQSPE EDLFQDAYYQSPETRLRFMRAMHGMTKLTA K K A T R L 2 1 0 2 0 2 2 0 0 0 1 1 0 1 1 1 1 0 2 0 0 0 17 1 2059.9487 B4DN81;B4DRF1;B3KM43;O95671 B4DN81 333 349 ASMTL N-acetylserotonin O-methyltransferase-like protein yes no 3 1.401E-06 60.032 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1341 425 1448 2175 3554 3554 630 0 KAEDSDSEPEPEDNVR FTSDGSPSPLGGIKRKAEDSDSEPEPEDNV AEDSDSEPEPEDNVRLWEAGWKQRYYKNKF R K A V R L 1 1 1 3 0 0 4 0 0 0 0 1 0 0 2 2 0 0 0 1 0 0 16 1 1815.7759 B4E0B9;B4DZC3;B3KMC9;Q9H0D6 B4E0B9 419 434 XRN2 5-3 exoribonuclease 2 yes no 2 8.2036E-31 93.371 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1342 428 1449 2176 3555 3555 632;633 0 KAEEATEAQEVVEATPEGACTEPR KKRKRKELRAKEKARKAEEATEAQEVVEAT EVVEATPEGACTEPREPPGLIFNKVEVSED R K A P R E 5 1 0 0 1 1 7 1 0 0 0 1 0 0 2 0 3 0 0 2 0 0 24 1 2601.1864 B3KNS8;O75683 B3KNS8 170 193 SURF6 Surfeit locus protein 6 yes no 3 0.015085 24.637 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1343 435 1450 2177 3556 3556 1 KAEEELGELEAK YDTRKSRLELQKDVRKAEEELGELEAKLNE DVRKAEEELGELEAKLNENLRRNIERINNE R K A A K L 2 0 0 0 0 0 5 1 0 0 2 2 0 0 0 0 0 0 0 0 0 0 12 1 1344.6773 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 684 695 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 yes no 2 0.0047543 51.727 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 4626700 4626700 0 0 0 0 4626700 4626700 0 1344 388 1451 2178 3557 3557 1 KAEGEPQEESPLK SPVSKRRGSQEKQTKKAEGEPQEESPLKSK TKKAEGEPQEESPLKSKSQEEPKDTFEHDP K K A L K S 1 0 0 0 0 1 4 1 0 0 1 2 0 0 2 1 0 0 0 0 0 0 13 1 1440.7096 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09;E9PJA7 Q6DCA8 168 180 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2;3 2.5795E-192 189.67 3 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1345 622 1452 2179;2180;2181;2182;2183 3558;3559;3560;3561;3562;3563;3564;3565;3566;3567 3559 947 0 KAEGGGGGGRPGAPAAGDGK PPGARQGQQQAGGKKKAEGGGGGGRPGAPA GGGGRPGAPAAGDGKTEQKGGDKKRGVKRP K K A G K T 4 1 0 1 0 0 1 9 0 0 0 2 0 0 2 0 0 0 0 0 0 0 20 2 1665.8183 Q96BA7;B3KX72;Q00839 Q96BA7 112 131 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes no 3 0.00014887 48.053 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 9622500 0 9622500 0 0 0 9622500 0 9622500 1346 453 1453 2184 3568 3568 1 KAEGGGGGGRPGAPAAGDGKTEQK PPGARQGQQQAGGKKKAEGGGGGGRPGAPA RPGAPAAGDGKTEQKGGDKKRGVKRPREDH K K A Q K G 4 1 0 1 0 1 2 9 0 0 0 3 0 0 2 0 1 0 0 0 0 0 24 3 2152.0621 Q96BA7;B3KX72;Q00839 Q96BA7 112 135 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes no 4 1.5488E-16 60.991 1 0.41835 0.54013 NaN 1 Median 0.41835 0.54013 NaN 1 0 Median NaN NaN NaN 0 0 Median 12218000 8600400 3617500 12218000 8600400 3617500 0 0 0 1347 453 1454 2185 3569 3569 1 KASGPPVSELITK PVKKKARKSAGAAKRKASGPPVSELITKVV KRKASGPPVSELITKVVAASKERSGVSLAA R K A T K V 1 0 0 0 0 0 1 1 0 1 1 2 0 0 2 2 1 0 0 1 0 0 13 1 1325.7555 P16403;Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402 Q4VB24 34 46 HIST1H1C;HIST1H1E;HIST1H1D Histone H1.2;Histone H1.4;Histone H1.3 no no 2 0 223.45 2 1 0.75039 0.91781 NaN 1 Median 0.75039 0.91781 NaN 1 0 Median NaN NaN NaN 0 0 Median 7098500 4155500 2943000 7098500 4155500 2943000 0 0 0 1348 308;739 1455;1456 2186;2187;2188 3570;3571;3572;3573;3574;3575;3576;3577;3578;3579;3580;3581 3575 457;458;1152;1153 1 KATGPPVSELITK KKATKKAAGAGAAKRKATGPPVSELITKAV KRKATGPPVSELITKAVAASKERNGLSLAA R K A T K A 1 0 0 0 0 0 1 1 0 1 1 2 0 0 2 1 2 0 0 1 0 0 13 1 1339.7711 P16401 P16401 37 49 HIST1H1B Histone H1.5 yes yes 3 0.018823 25.957 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 8283100 8283100 0 0 0 0 8283100 8283100 0 1349 738 1457 2189 3582 3582 1 KCPFTGNVSIR FKTPKEAIEGTYIDKKCPFTGNVSIRGRIL YIDKKCPFTGNVSIRGRILSGVVTKMKMQR K K C I R G 0 1 1 0 1 0 0 1 0 1 0 1 0 1 1 1 1 0 0 1 0 0 11 1 1277.655 P62280;M0QZC5 P62280 59 69 RPS11 40S ribosomal protein S11 yes no 3 0.0031236 58.172 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 5952100 5952100 0 0 0 0 5952100 5952100 0 1350 788 1458 2190 3583 3583 1 KDDEVQVVR KELRQKYNVRSMPIRKDDEVQVVRGHYKGQ RSMPIRKDDEVQVVRGHYKGQQIGKVVQVY R K D V R G 0 1 0 2 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 3 0 0 9 1 1086.5669 Q6IBH6;P61254;J3KTJ8;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;A0A024RBF6;Q9UNX3;E5RIT6 Q6IBH6 51 59 RPL26;hCG_26523;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 no no 2 1.3027E-27 122.33 1 1 0.56764 0.80726 41.078 2 Median 0.83845 1.0793 NaN 1 0 Median 0.3843 0.60376 NaN 1 0 Median 101080000 71026000 30055000 9354900 5353400 4001500 91726000 65672000 26054000 1351 782;959 1459 2191;2192 3584;3585;3586;3587 3585 4 KDDFLGAAEGK QFFKISPDLNIKCERKDDFLGAAEGKLQCN KCERKDDFLGAAEGKLQCNRLMPNSQKDCH R K D G K L 2 0 0 2 0 0 1 2 0 0 1 2 0 1 0 0 0 0 0 0 0 0 11 1 1149.5666 E9PEI0;Q69YH5;A8K8Z0;B3KRS8 E9PEI0 751 761 CDCA2 Cell division cycle-associated protein 2 yes no 2 8.3275E-05 94.538 1 0.41649 0.50809 NaN 1 Median NaN NaN NaN 0 0 Median 0.41649 0.50809 NaN 1 0 Median 29897000 21064000 8832700 0 0 0 29897000 21064000 8832700 1352 615 1460 2193 3588;3589 3589 2 KDDINLLPSK DFHKRTPNRYHLRSKKDDINLLPSKSSVTK HLRSKKDDINLLPSKSSVTKICRDPQTPVL K K D S K S 0 0 1 2 0 0 0 0 0 1 2 2 0 0 1 1 0 0 0 0 0 0 10 1 1141.6343 B3KM90;Q643R0;Q9ULW0 B3KM90 209 218 HCTP4;TPX2 Targeting protein for Xklp2 yes no 2 0.0027761 84.06 1 0.65159 0.81668 NaN 1 Median NaN NaN NaN 0 0 Median 0.65159 0.81668 NaN 1 0 Median 14651000 8794300 5857100 0 0 0 14651000 8794300 5857100 1353 427 1461 2194 3590;3591 3591 2 KDEDLFR FDKAYVVLGQFLVLKKDEDLFREWLKDTCG LGQFLVLKKDEDLFREWLKDTCGANAKQSR K K D F R E 0 1 0 2 0 0 1 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 7 1 921.4556 B2R4V4;A0A024R5H0;O75531 B2R4V4 54 60 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed yes no 2 3.8474E-26 128.37 1 1 0.75375 1.0954 9.555 2 Median 0.90504 1.172 NaN 1 0 Median 0.62775 1.0238 NaN 1 0 Median 575910000 333680000 242230000 111700000 54694000 57010000 464210000 278990000 185220000 1354 69 1462 2195;2196 3592;3593;3594 3594 3 KDEIENSIVHR ELIRRRRTRIGYSFKKDEIENSIVHRVQGV YSFKKDEIENSIVHRVQGVFQRASAKWKDD K K D H R V 0 1 1 1 0 0 2 0 1 2 0 1 0 0 0 1 0 0 0 1 0 0 11 1 1338.6892 B4DSL9;B3KQ21;Q9NYH9;B7Z9G4 B4DSL9 81 91 UTP6 U3 small nucleolar RNA-associated protein 6 homolog yes no 3 0.0010094 52.693 1 0.9279 1.2018 NaN 1 Median 0.9279 1.2018 NaN 1 0 Median NaN NaN NaN 0 0 Median 12981000 5818300 7162600 12981000 5818300 7162600 0 0 0 1355 438 1463 2197 3595;3596 3596 2 KDSNELSDSAGEEDSADLK KERCKRGRFVVKEEKKDSNELSDSAGEEDS ELSDSAGEEDSADLKRAQKDKGLHVEVRVN K K D L K R 2 0 1 4 0 0 3 1 0 0 2 2 0 0 0 4 0 0 0 0 0 0 19 1 2008.8709 Q9Y6X9 Q9Y6X9 771 789 MORC2 MORC family CW-type zinc finger protein 2 yes yes 2 3.1315E-06 45.608 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1356 969 1464 2198;2199 3597;3598 3597 1758;1759 0 KEDALLYQSK LNSTRGDADMYDLPKKEDALLYQSKGYNDD YDLPKKEDALLYQSKGYNDDYYEESYFTTR K K E S K G 1 0 0 1 0 1 1 0 0 0 2 2 0 0 0 1 0 0 1 0 0 0 10 1 1193.6292 P50402;Q5HY57 P50402 79 88 EMD Emerin yes no 2 0.00018806 69.554 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3612600 3612600 0 0 0 0 3612600 3612600 0 1357 771 1465;1466 2200;2201 3599;3600 3600 1252 1 KEDLEFQAK ETLRPYQSPFMDREKKEDLEFQAKHMDQPL FMDREKKEDLEFQAKHMDQPLPTAIGLYKN K K E A K H 1 0 0 1 0 1 2 0 0 0 1 2 0 1 0 0 0 0 0 0 0 0 9 1 1106.5608 X5DRB1;D9I4E1;A8K146;A0A024R2M8;Q01831;D2CPJ3;D2CPJ1;D2CPI8 X5DRB1 620 628 XPC DNA repair protein complementing XP-C cells no no 2 2.6532E-97 165.98 1 0.64405 0.78224 NaN 1 Median NaN NaN NaN 0 0 Median 0.64405 0.78224 NaN 1 0 Median 35197000 20891000 14306000 0 0 0 35197000 20891000 14306000 1358 48;586 1467 2202 3601 3601 1 KEEELRKEEER EMKRINREQFWEQAKKEEELRKEEERKKAL EQAKKEEELRKEEERKKALDERLRFEQERM K K E E R K 0 2 0 0 0 0 6 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 11 3 1473.7423 B3KSQ7;Q16643;D6R9W4 B3KSQ7 136 146 DBN1 Drebrin yes no 3 0.017107 29.807 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3930800 3930800 0 3930800 3930800 0 0 0 0 1359 444 1468 2203 3602 3602 1 KEEPSQNDISPK SEVDMNSPKSKKAKKKEEPSQNDISPKTKS AKKKEEPSQNDISPKTKSLRKKKEPIEKKV K K E P K T 0 0 1 1 0 1 2 0 0 1 0 2 0 0 2 2 0 0 0 0 0 0 12 1 1370.6678 Q9NR30 Q9NR30 80 91 DDX21 Nucleolar RNA helicase 2 yes yes 2 0.0023287 51.092 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1360 934 1469 2204 3603 3603 1647 0 KEESEESDDDMGFGLFD AGSAPAAAEEKKDEKKEESEESDDDMGFGL ESEESDDDMGFGLFD_______________ K K E F D - 0 0 0 4 0 0 4 2 0 0 1 1 1 2 0 2 0 0 0 0 0 0 17 1 1948.752 A0A024RCA7;P05387;H0YDD8;Q6ICQ4;Q6FG99;A0A024R608;P05386 A0A024RCA7 99 115 RPLP2;RPLP1 60S acidic ribosomal protein P2;60S acidic ribosomal protein P1 yes no 2 1.489E-06 55.864 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1361 154 1470 2205 3604 3604 33 213 0 KEKTPELPEPSVK RHRTKSRSPSPAPEKKEKTPELPEPSVKVK EKKEKTPELPEPSVKVKEPSVQEATSTSDI K K E V K V 0 0 0 0 0 0 3 0 0 0 1 3 0 0 3 1 1 0 0 1 0 0 13 2 1480.8137 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3;M0R088;E9PCT1;B4DED5 A0A0S2Z4W1 217 229 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 3 0.00014344 72.797 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1362 266 1471 2206 3605 3605 1823 0 KESESEDSSDDEPLIK KADSSTTKKNQNSSKKESESEDSSDDEPLI ESESEDSSDDEPLIKKLKKPPTDEELKETI K K E I K K 0 0 0 3 0 0 4 0 0 1 1 2 0 0 1 4 0 0 0 0 0 0 16 1 1806.8007 P35659;B4DFG0;B4DNW3;H0Y993 P35659 299 314 DEK Protein DEK yes no 2 6.7488E-08 88.187 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1363 754 1472 2207;2208 3606;3607 3606 1177;1178;1179 0 KESYSIYVYK TKAQKKDGKKRKRSRKESYSIYVYKVLKQV RKRSRKESYSIYVYKVLKQVHPDTGISSKA R K E Y K V 0 0 0 0 0 0 1 0 0 1 0 2 0 0 0 2 0 0 3 1 0 0 10 1 1278.6496 A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257;Q6DRA6;Q6DN03 A0A024RCJ2 35 44 HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C yes no 2;3 2.2232E-136 177.78 1 4 0.29366 0.34463 75.769 4 Median 0.81684 0.98508 NaN 1 0 Median 0.29727 0.34144 46.021 3 0 Plateau 1165300000 855550000 309700000 102190000 56419000 45772000 1063100000 799130000 263930000 1364 158 1473 2209;2210;2211;2212;2213 3608;3609;3610;3611;3612;3613;3614;3615;3616;3617;3618;3619;3620 3614 13 KESYSVYVYK TKAQKKDGKKRKRSRKESYSVYVYKVLKQV RKRSRKESYSVYVYKVLKQVHPDTGISSKA R K E Y K V 0 0 0 0 0 0 1 0 0 0 0 2 0 0 0 2 0 0 3 2 0 0 10 1 1264.634 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;P57053 B2R4S9 35 44 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S yes no 2;3 3.9134E-38 146.11 3 2 0.39227 0.45844 83.498 2 Median 0.69496 0.82736 NaN 1 0 Median 0.22141 0.25402 NaN 1 0 Median 1418500000 1087600000 330890000 358040000 213490000 144560000 1060500000 874130000 186330000 1365 10 1474;1475 2214;2215;2216;2217;2218 3621;3622;3623;3624;3625;3626;3627;3628;3629;3630;3631;3632;3633;3634;3635 3622 14;15 14 KETESEAEDNLDDLEK TTLAQEEPVAAPEPKKETESEAEDNLDDLE ETESEAEDNLDDLEKHLREKALRSMRKAQV K K E E K H 1 0 1 3 0 0 5 0 0 0 2 2 0 0 0 1 1 0 0 0 0 0 16 1 1863.8222 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3 A0A0S2Z4W1 870 885 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 7.299E-07 60.826 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1366 266 1476 2219 3636 3636 361;1824 0 KETPPPLVPPAAR ______________________________ MRKETPPPLVPPAAREWNLPPNAPACMERQ R K E A R E 2 1 0 0 0 0 1 0 0 0 1 1 0 0 5 0 1 0 0 1 0 0 13 1 1371.7874 B4DJP0;A0A024R0H7;Q9BQA1 B4DJP0 3 15 WDR77 Methylosome protein 50 yes no 2 0.0011587 41.644 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1367 17 1477 2220 3637 3637 1773 0 KFDQLLAEEK DHQRQSACNLEKKQKKFDQLLAEEKTISAK EKKQKKFDQLLAEEKTISAKYAEERDRAEA K K F E K T 1 0 0 1 0 1 2 0 0 0 2 2 0 1 0 0 0 0 0 0 0 0 10 1 1219.6449 A0A024R1N1;A0A0U4BW16;P35579;Q68D89;A0A0C4DFM8;O14729;O14794;B4E177;A1L2Z2;Q7Z7R0;A0A024QZJ6;A0A024QZJ4;B1PS43;P35749;P35580;Q7Z406 A0A024R1N1 1445 1454 MYH9;DKFZp686D10126;MYH14;MYH11;MYH10 Myosin-9;Myosin-11;Myosin-10;Myosin-14 yes no 2 2.3161E-21 121.36 1 1 1.8793 2.2631 112.33 2 Median 0.85279 1.0227 NaN 1 0 Median 4.1415 5.0082 NaN 1 0 Median 45601000 9464900 36136000 4101500 1898700 2202900 41499000 7566300 33933000 1368 32 1478 2221;2222 3638;3639 3639 2 KFGGPGAR DRTLLVADPRRCESKKFGGPGARARYQKSY PRRCESKKFGGPGARARYQKSYR_______ K K F A R A 1 1 0 0 0 0 0 3 0 0 0 1 0 1 1 0 0 0 0 0 0 0 8 1 788.42932 M0R210;P62249;A0A087WZ27 M0R210 114 121 RPS16;ZNF90 40S ribosomal protein S16 yes no 2 0.00026302 92.191 1 0.89738 1.3835 NaN 1 Median NaN NaN NaN 0 0 Median 0.89738 1.3835 NaN 1 0 Median 40565000 20481000 20084000 0 0 0 40565000 20481000 20084000 1369 693 1479 2223 3640 3640 1 KFPTTATKISPK PTVSSGQATPTSPIKKFPTTATKISPKEEE PIKKFPTTATKISPKEEERKDESPATWRLG K K F P K E 1 0 0 0 0 0 0 0 0 1 0 3 0 1 2 1 3 0 0 0 0 0 12 2 1317.7656 H0YIS4;H0YHI8;F8VZN8;A0A024RBF1;B2RAH5;O14974 H0YIS4 108 119 PPP1R12A Protein phosphatase 1 regulatory subunit;Protein phosphatase 1 regulatory subunit 12A yes no 3 0.0033928 42.314 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1370 142 1480 2224 3641 3641 205 0 KFYPLEIDYGQDEEAVK TGNAWHSKNFTKYPKKFYPLEIDYGQDEEA YPLEIDYGQDEEAVKKLTVNPGTKSKLPKP K K F V K K 1 0 0 2 0 1 3 1 0 1 1 2 0 1 1 0 0 0 2 1 0 0 17 1 2042.9837 A0A024R3T8;P09874;B4E0E1 A0A024R3T8 637 653 PARP1 Poly [ADP-ribose] polymerase 1 yes no 3 0.0011309 40.349 1 0.57471 0.72042 NaN 1 Median NaN NaN NaN 0 0 Median 0.57471 0.72042 NaN 1 0 Median 14716000 9222400 5493900 0 0 0 14716000 9222400 5493900 1371 56 1481 2225 3642 3642 0 KGAGDGSDEEVDGKADGAEAKPAE RRGDLPFVVPRRMARKGAGDGSDEEVDGKA EVDGKADGAEAKPAE_______________ R K G A E - 5 0 0 4 0 0 4 5 0 0 0 3 0 0 1 1 0 0 0 1 0 0 24 3 2302.0197 A0A024R1N1;A0A0U4BW16;P35579;Q6ZNL4 A0A024R1N1 1937 1960 MYH9;FLJ00279 Myosin-9 yes no 3 1.447E-257 197.7 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1372 32 1482 2226 3643 3643 30 0 KGDECELLGHSK RGTVVTGTLERGILKKGDECELLGHSKNIR ILKKGDECELLGHSKNIRTVVTGIEMFHKS K K G S K N 0 0 0 1 1 0 2 2 1 0 2 2 0 0 0 1 0 0 0 0 0 0 12 1 1371.6453 P49411 P49411 286 297 TUFM Elongation factor Tu, mitochondrial yes yes 3 0.0041344 33.204 1 0.50953 0.61759 NaN 1 Median 0.50953 0.61759 NaN 1 0 Median NaN NaN NaN 0 0 Median 5993500 4257200 1736300 5993500 4257200 1736300 0 0 0 1373 767 1483 2227 3644;3645 3644 2 KGDEVDGVDEVAK ALKKQLPGVKSEGKRKGDEVDGVDEVAKKK KRKGDEVDGVDEVAKKKSKKEKDKDSKLEK R K G A K K 1 0 0 3 0 0 2 2 0 0 0 2 0 0 0 0 0 0 0 3 0 0 13 1 1359.6518 A0A024R3T8;P09874;B2R5W3;B4E0E1;Q05D33;Q6PJL0;Q96P95 A0A024R3T8 209 221 PARP1 Poly [ADP-ribose] polymerase 1 yes no 2 0.019631 37.793 1 0.25755 0.31805 NaN 1 Median NaN NaN NaN 0 0 Median 0.25755 0.31805 NaN 1 0 Median 10125000 7017600 3107800 0 0 0 10125000 7017600 3107800 1374 56 1484 2228 3646 3646 1 KGDIVDIK KHGVVPLATYMRIYKKGDIVDIKGMGTVQK TYMRIYKKGDIVDIKGMGTVQKGMPHKCYH K K G I K G 0 0 0 2 0 0 0 1 0 2 0 2 0 0 0 0 0 0 0 1 0 0 8 1 886.51238 Q6IAX2;P46778;Q59GK9;M0R181;G3V1B3 Q6IAX2 36 43 RPL21 60S ribosomal protein L21 yes no 2 0.0062839 76.345 1 0.71078 0.88103 NaN 1 Median 0.71078 0.88103 NaN 1 0 Median NaN NaN NaN 0 0 Median 9224700 5449000 3775700 9224700 5449000 3775700 0 0 0 1375 764 1485 2229 3647;3648 3648 2 KGEFVNEYVGELIDEEECR TLQRGWGLRTKTDIKKGEFVNEYVGELIDE VNEYVGELIDEEECRARIRYAQEHDITNFY K K G C R A 0 1 1 1 1 0 6 2 0 1 1 1 0 1 0 0 0 0 1 2 0 0 19 1 2314.0423 B2RWP5;Q96L73;Q658U6;Q9H6B5;A0A1D8GZ55;A0A1D8GZ56;Q96DQ7;Q9BZ95 B2RWP5 1695 1713 NSD1;DKFZp666C163;WHSC1L1 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific;Histone-lysine N-methyltransferase NSD3 no no 3 0.0053707 22.221 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1134700 1134700 0 1134700 1134700 0 0 0 0 1376 422;923 1486 2230 3649 3649 1 KGGEFDEFVNDDTDDDLPISK TKEKKRGGGGGRRSKKGGEFDEFVNDDTDD EFVNDDTDDDLPISKKKKRRKGSGSEQEGE K K G S K K 0 0 1 6 0 0 2 2 0 1 1 2 0 2 1 1 1 0 0 1 0 0 21 1 2355.039 A8K6X9;Q6PD62 A8K6X9 913 933 CTR9 RNA polymerase-associated protein CTR9 homolog yes no 3 1.6083E-60 134.03 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1377 366 1487 2231;2232 3650;3651;3652;3653;3654 3651 1857 0 KGGSSDEGPEPEAEESDLDSGSVHSASGRPDGPVR APLKIKLGLLGGKRKKGGSSDEGPEPEAEE GSVHSASGRPDGPVRTKKLKRGRPGRKKKK K K G V R T 2 2 0 4 0 0 5 6 1 0 1 1 0 0 4 7 0 0 0 2 0 0 35 2 3493.5466 H7C2H0 H7C2H0 180 214 CHD3 yes yes 4 3.8919E-35 69.143 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1378 673 1488 2233 3655 3655 998;999 0 KGHAVGDIPGVR FIEENDEVLVAGFGRKGHAVGDIPGVRFKV FGRKGHAVGDIPGVRFKVVKVANVSLLALY R K G V R F 1 1 0 1 0 0 0 3 1 1 0 1 0 0 1 0 0 0 0 2 0 0 12 1 1204.6677 A8K517;P62266;D6RD47 A8K517 108 119 RPS23 40S ribosomal protein S23 yes no 3 0.0010081 54.343 1 0.45291 0.6109 NaN 1 Median NaN NaN NaN 0 0 Median 0.45291 0.6109 NaN 1 0 Median 10898000 7053000 3844600 0 0 0 10898000 7053000 3844600 1379 358 1489 2234 3656;3657 3656 2 KGLQARILTSEEEEK ______________________________ KGLQARILTSEEEEKLKRDQTLVSDFKQQK R K G E K L 1 1 0 0 0 1 4 1 0 1 2 2 0 0 0 1 1 0 0 0 0 0 15 2 1729.921 M0R0W0;B4DDX3;Q8TCB7 M0R0W0 7 21 METTL6 Methyltransferase-like protein 6 yes no 2 0.00028267 51.092 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1380 458 1490 2235 3658 3658 1 KGPQSLFNAPR LPKGISAGAVQTAGKKGPQSLFNAPRGKKR TAGKKGPQSLFNAPRGKKRPAPGSDEEEEE K K G P R G 1 1 1 0 0 1 0 1 0 0 1 1 0 1 2 1 0 0 0 0 0 0 11 1 1213.6568 P46087;F5H5X6;F5GWB7;F5H709 P46087 92 102 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes no 3 0.00018542 76.843 1 0.56868 0.79183 NaN 1 Median NaN NaN NaN 0 0 Median 0.56868 0.79183 NaN 1 0 Median 14139000 9162100 4977200 0 0 0 14139000 9162100 4977200 1381 763 1491 2236 3659 3659 1 KGSLLPTSPR KATPPPSPLLSELLKKGSLLPTSPRLVNES SELLKKGSLLPTSPRLVNESEMAVASGHLN K K G P R L 0 1 0 0 0 0 0 1 0 0 2 1 0 0 2 2 1 0 0 0 0 0 10 1 1054.6135 H7C128;H7C179;H7C127;B2R5V7;A8K1N6;B4DSD6 H7C128 268 277 BRD8 yes no 2 0.00058631 80.014 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1382 341 1492 2237;2238 3660;3661;3662 3661 516;1846 0 KHSPSPPPPTPTESR PERRDRKASANARKRKHSPSPPPPTPTESR KHSPSPPPPTPTESRKKSGKKGQASLYGKR R K H S R K 0 1 0 0 0 0 1 0 1 0 0 1 0 0 6 3 2 0 0 0 0 0 15 1 1613.8162 Q58EY4;Q92922;Q05BW5;Q05CR1;B4DYQ1 Q58EY4 326 340 SMARCC1 SWI/SNF complex subunit SMARCC1 yes no 3 0.00050659 43.955 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1383 839 1493 2239 3663 3663 1386;1387 0 KIEIDNKVSDEEDK KTKKRLNFDDKVMLKKIEIDNKVSDEEDKT KKIEIDNKVSDEEDKTSEGQERKPSGSSQN K K I D K T 0 0 1 3 0 0 3 0 0 2 0 3 0 0 0 1 0 0 0 1 0 0 14 2 1660.8156 Q03188;H0Y8J2 Q03188 217 230 CENPC Centromere protein C yes no 3 6.244E-13 106.57 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1384 799 1494 2240;2241 3664;3665;3666;3667;3668 3664 1307 0 KIESFGSPK HVVFGFVKDGMDTVKKIESFGSPKGSVCRR GMDTVKKIESFGSPKGSVCRRITITECGQI K K I P K G 0 0 0 0 0 0 1 1 0 1 0 2 0 1 1 2 0 0 0 0 0 0 9 1 991.53385 P49792;Q5JC45 P49792 3201 3209 RANBP2 E3 SUMO-protein ligase RanBP2 yes no 2 0.0095965 55.776 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1385 769 1495 2242 3669 3669 1243 0 KIEVPAQLK LFSPASEVPRKAKAKKIEVPAQLKELVSDL RKAKAKKIEVPAQLKELVSDLSSQFVISPP K K I L K E 1 0 0 0 0 1 1 0 0 1 1 2 0 0 1 0 0 0 0 1 0 0 9 1 1024.6281 Q8WYP5;B3KRD0 Q8WYP5 2133 2141 AHCTF1 Protein ELYS yes no 2 0.00066256 88.267 1 0.54792 0.67092 NaN 1 Median NaN NaN NaN 0 0 Median 0.54792 0.67092 NaN 1 0 Median 26084000 16255000 9828900 0 0 0 26084000 16255000 9828900 1386 897 1496 2243 3670;3671 3670 2 KIKNENTEGSPQEDGVELEGLK ITIEMKAEAEKKNKKKIKNENTEGSPQEDG EGSPQEDGVELEGLKQRLEKKQKREPGTKT K K I L K Q 0 0 2 1 0 1 5 3 0 1 2 3 0 0 1 1 1 0 0 1 0 0 22 2 2413.1973 P11388 P11388 1238 1259 TOP2A DNA topoisomerase 2-alpha yes yes 3 1.6325E-24 100.68 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1387 734 1497 2244;2245 3672;3673 3673 1141;1961 0 KIPDPDSDDVSEVDAR PQAAQPPTLPVEEKKKIPDPDSDDVSEVDA IPDPDSDDVSEVDARHIIENAKQDVDDEYG K K I A R H 1 1 0 5 0 0 1 0 0 1 0 1 0 0 2 2 0 0 0 2 0 0 16 1 1756.8115 A7E2E1;Q9HBD4;B9EGQ8;A0A0A0MT49;P51532;Q59FZ6 A7E2E1 689 704 SMARCA4 Transcription activator BRG1 yes no 2 1.6832E-26 116.35 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1388 224 1498 2246 3674 3674 313 0 KITAFVPNDGCLNFIEENDEVLVAGFGR AIRKCVRVQLIKNGKKITAFVPNDGCLNFI FIEENDEVLVAGFGRKGHAVGDIPGVRFKV K K I G R K 2 1 3 2 1 0 3 3 0 2 2 1 0 3 1 0 1 0 0 3 0 0 28 1 3123.5335 A8K517;P62266;D6RD47 A8K517 80 107 RPS23 40S ribosomal protein S23 yes no 3 1.2412E-36 95.212 1 0.39829 0.62691 NaN 1 Median NaN NaN NaN 0 0 Median 0.39829 0.62691 NaN 1 0 Median 99561000 70277000 29284000 0 0 0 99561000 70277000 29284000 1389 358 1499 2247 3675 3675 1 KITDGLHALQEASNK VEDSKTLAAKEKEVKKITDGLHALQEASNK KITDGLHALQEASNKDAEALAAAQQHFNAV K K I N K D 2 0 1 1 0 1 1 1 1 1 2 2 0 0 0 1 1 0 0 0 0 0 15 1 1623.858 B7ZLZ7;A0A024R158;O95347;A8K984;B3KMB1;Q2KQ72;Q05BV1 B7ZLZ7 354 368 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 yes no 3 0.0029611 27.496 1 0.48837 0.60355 NaN 1 Median NaN NaN NaN 0 0 Median 0.48837 0.60355 NaN 1 0 Median 20153000 10938000 9214700 0 0 0 20153000 10938000 9214700 1390 27 1500 2248 3676 3676 1 KITVVPSAK ______________________________ ______________________________ K K I A K D 1 0 0 0 0 0 0 0 0 1 0 2 0 0 1 1 1 0 0 2 0 0 9 1 941.59097 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4 Q8N4P8 6 14 GTPBP4 Nucleolar GTP-binding protein 1 yes no 2 0.0061251 61.78 1 0.53695 0.66383 NaN 1 Median NaN NaN NaN 0 0 Median 0.53695 0.66383 NaN 1 0 Median 20008000 12501000 7507400 0 0 0 20008000 12501000 7507400 1391 585 1501 2249 3677 3677 1 KKDELSDYAEK DGEKKSKKIRDKTSKKKDELSDYAEKSTGK KTSKKKDELSDYAEKSTGKGDSCDSSEDKK K K K E K S 1 0 0 2 0 0 2 0 0 0 1 3 0 0 0 1 0 0 1 0 0 0 11 2 1324.6511 A4LAA3;P46100;A0A096LNL9;B7Z1D8;A0A096LP59 A4LAA3 1056 1066 ATRX Transcriptional regulator ATRX yes no 2 0.0075211 43.594 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1392 317 1502 2250 3678 3678 474 0 KKEELLK ______________________________ KARDLRGKKKEELLKQLDDLKVELSQLRVA K K K L K Q 0 0 0 0 0 0 2 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 7 2 886.54877 P42766;F2Z388;A0A024R866 P42766 13 19 RPL35 60S ribosomal protein L35 yes no 2 1.5141E-12 113.5 1 3 0.47026 0.65374 81.484 2 Median 0.86916 1.1631 NaN 1 0 Median 0.25444 0.36743 NaN 1 0 Median 77405000 55511000 21894000 25928000 12851000 13077000 51477000 42659000 8817400 1393 760 1503 2251;2252;2253;2254 3679;3680;3681;3682;3683 3680 5 KKEEPSQNDISPK PSEVDMNSPKSKKAKKKEEPSQNDISPKTK AKKKEEPSQNDISPKTKSLRKKKEPIEKKV K K K P K T 0 0 1 1 0 1 2 0 0 1 0 3 0 0 2 2 0 0 0 0 0 0 13 2 1498.7627 Q9NR30 Q9NR30 79 91 DDX21 Nucleolar RNA helicase 2 yes yes 2;3 3.6505E-10 101.08 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1394 934 1504 2255;2256 3684;3685;3686;3687;3688 3685 1647 0 KKEEREEIEK KWKDRRKSYTSDLQKKKEEREEIEKQALEK SDLQKKKEEREEIEKQALEKSKRSSKTFKE K K K E K Q 0 1 0 0 0 0 5 0 0 1 0 3 0 0 0 0 0 0 0 0 0 0 10 3 1316.6936 E9PMS6;B7Z8W3;A0A1P7ZIM8;A0A0A0MTE2;E9PMT2;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMP7;H0Y424;E9PJ10;E9PK58 E9PMS6 324 333 LMO7 LIM domain only protein 7 yes no 3 3.8837E-05 72.643 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 12584000 12584000 0 12584000 12584000 0 0 0 0 1395 227 1505 2257 3689 3689 1 KKPNATRPVTPPR ETLMCSFQILKPAEKKKPNATRPVTPPRGM EKKKPNATRPVTPPRGMITKQAKK______ K K K P R G 1 2 1 0 0 0 0 0 0 0 0 2 0 0 4 0 2 0 0 1 0 0 13 3 1460.8576 A0A024RBP2;F8W0W8;P36873;B4DNE3 A0A024RBP2 302 314 PPP1CC Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit yes no 4 0.01311 19.74 1 0.66964 0.9036 NaN 1 Median 0.66964 0.9036 NaN 1 0 Median NaN NaN NaN 0 0 Median 5127600 2909200 2218400 5127600 2909200 2218400 0 0 0 1396 148 1506 2258 3690 3690 1 KKPNPVEEEPSR ASGDEGIKVLKQRAKKKPNPVEEEPSRRRP RAKKKPNPVEEEPSRRRPRAPKEKAQPLED K K K S R R 0 1 1 0 0 0 3 0 0 0 0 2 0 0 3 1 0 0 0 1 0 0 12 2 1408.731 P46013 P46013 2652 2663 MKI67 Antigen KI-67 yes yes 3 0.0020553 42.095 1 1 0.91398 1.1935 7.4091 2 Median 0.94932 1.1326 NaN 1 0 Median 0.87995 1.2577 NaN 1 0 Median 91428000 45575000 45853000 40205000 18835000 21369000 51223000 26739000 24484000 1397 762 1507 2259;2260 3691;3692;3693;3694;3695;3696 3693 6 KKPNPVEEEPSRR ASGDEGIKVLKQRAKKKPNPVEEEPSRRRP AKKKPNPVEEEPSRRRPRAPKEKAQPLEDL K K K R R R 0 2 1 0 0 0 3 0 0 0 0 2 0 0 3 1 0 0 0 1 0 0 13 3 1564.8322 P46013 P46013 2652 2664 MKI67 Antigen KI-67 yes yes 3;4 0.0010351 42.809 2 0.78428 1.0583 NaN 1 Median 0.78428 1.0583 NaN 1 0 Median NaN NaN NaN 0 0 Median 26358000 15557000 10801000 26358000 15557000 10801000 0 0 0 1398 762 1508 2261;2262 3697;3698;3699 3697 3 KKPTEEEIRK LHSPQTHWKTVREERKKPTEEEIRKICRDE VREERKKPTEEEIRKICRDEKEALGQNEES R K K R K I 0 1 0 0 0 0 3 0 0 1 0 3 0 0 1 0 1 0 0 0 0 0 10 3 1256.7089 B4E0V1;B4DZT1;B8ZZS4;A0A024R464;Q9H8Y5 B4E0V1 164 173 ANKZF1 Ankyrin repeat and zinc finger domain-containing protein 1 yes no 3 0.0076336 39.917 1 0.30846 0.39825 NaN 1 Median 0.30846 0.39825 NaN 1 0 Median NaN NaN NaN 0 0 Median 4350600 3322200 1028400 4350600 3322200 1028400 0 0 0 1399 59 1509 2263 3700 3700 1 KLDAEDVIGSRR GEGKGTKAFKQPAKRKLDAEDVIGSRRQPR AKRKLDAEDVIGSRRQPRAPKEKAQPLEDL R K L R R Q 1 2 0 2 0 0 1 1 0 1 1 1 0 0 0 1 0 0 0 1 0 0 12 2 1357.7314 P46013 P46013 2892 2903 MKI67 Antigen KI-67 yes yes 3 0.0095499 31.675 1 0.9663 1.2395 NaN 1 Median NaN NaN NaN 0 0 Median 0.9663 1.2395 NaN 1 0 Median 7575500 3137800 4437600 0 0 0 7575500 3137800 4437600 1400 762 1510 2264 3701;3702 3701 2 KLDELYGTWR GHVGRFCIWTESAFRKLDELYGTWRKAASL ESAFRKLDELYGTWRKAASLKSNYNLPMHK R K L W R K 0 1 0 1 0 0 1 1 0 0 2 1 0 0 0 0 1 1 1 0 0 0 10 1 1279.6561 Q59GY2;P36578;H3BM89;B4DMJ6;B4DMJ2;Q53G74 Q59GY2 273 282 RPL4 60S ribosomal protein L4 yes no 2 0.020255 44.425 1 0.64012 0.98288 NaN 1 Median NaN NaN NaN 0 0 Median 0.64012 0.98288 NaN 1 0 Median 34007000 20752000 13255000 0 0 0 34007000 20752000 13255000 1401 755 1511 2265 3703 3703 1 KLDVEEPDSANSSFYSTR ARRRTTQIINITMTKKLDVEEPDSANSSFY VEEPDSANSSFYSTRSAPASQASLRATSST K K L T R S 1 1 1 2 0 0 2 0 0 0 1 1 0 1 1 4 1 0 1 1 0 0 18 1 2043.9385 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q59HB8;Q96HN5;H0YFY6;Q7Z757;Q9UNL7 A0A087WY61 1806 1823 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 yes no 3 3.9207E-11 79.69 1 1 0.30851 0.46654 NaN 1 Median NaN NaN NaN 0 0 Median 0.30851 0.46654 NaN 1 0 Median 27466000 20766000 6699900 0 0 0 27466000 20766000 6699900 1402 71 1512;1513 2266;2267 3704;3705;3706;3707 3705 86 2 KLEAGIR PHASIMFCTVGVLLRKLEAGIRGISHVIVD CTVGVLLRKLEAGIRGISHVIVDEIHERDI R K L I R G 1 1 0 0 0 0 1 1 0 1 1 1 0 0 0 0 0 0 0 0 0 0 7 1 785.47594 Q08211;Q58F26;Q6PJK6 Q08211 497 503 DHX9 ATP-dependent RNA helicase A yes no 2 9.0431E-07 104.76 1 0.48597 0.74715 NaN 1 Median NaN NaN NaN 0 0 Median 0.48597 0.74715 NaN 1 0 Median 35977000 24498000 11479000 0 0 0 35977000 24498000 11479000 1403 802 1514 2268 3708 3708 1 KLEAQETLNEEDK KITELLNKTDNRPLKKLEAQETLNEEDKAK LKKLEAQETLNEEDKAKIAKSKKKMRQKVQ K K L D K A 1 0 1 1 0 1 4 0 0 0 2 2 0 0 0 0 1 0 0 0 0 0 13 1 1545.7522 J3QK86;J3KPG5;F8VU39;Q9UIF9;H0YII3 J3QK86 663 675 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A yes no 3 0.0061481 26.21 1 0.90432 1.0895 NaN 1 Median NaN NaN NaN 0 0 Median 0.90432 1.0895 NaN 1 0 Median 6138100 2690800 3447300 0 0 0 6138100 2690800 3447300 1404 636 1515 2269 3709;3710 3710 2 KLEEEQIILEDQNCK QKLQLEKVTTEAKLKKLEEEQIILEDQNCK KLEEEQIILEDQNCKLAKEKKLLEDRIAEF K K L C K L 0 0 1 1 1 2 4 0 0 2 2 2 0 0 0 0 0 0 0 0 0 0 15 1 1887.9248 A0A024R1N1;A0A0U4BW16;P35579;Q86XU5;Q99529 A0A024R1N1 975 989 MYH9 Myosin-9 yes no 3 9.3149E-07 69.045 1 0.97925 1.203 NaN 1 Median 0.97925 1.203 NaN 1 0 Median NaN NaN NaN 0 0 Median 20696000 9259600 11437000 20696000 9259600 11437000 0 0 0 1405 32 1516 2270 3711;3712 3712 2 KLEELEK EGHNIADYIDPAIMKKLEELEKEEELRTAA YIDPAIMKKLEELEKEEELRTAAGEYDSVS K K L E K E 0 0 0 0 0 0 3 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 7 1 887.4964 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 447 453 GTPBP4 Nucleolar GTP-binding protein 1 yes no 2 1.064E-10 106.94 1 0.55578 0.66635 NaN 1 Median NaN NaN NaN 0 0 Median 0.55578 0.66635 NaN 1 0 Median 70315000 45475000 24841000 0 0 0 70315000 45475000 24841000 1406 585 1517 2271 3713 3713 1 KLEELEKEEELR EGHNIADYIDPAIMKKLEELEKEEELRTAA IMKKLEELEKEEELRTAAGEYDSVSESEDE K K L L R T 0 1 0 0 0 0 6 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 12 2 1543.8094 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 447 458 GTPBP4 Nucleolar GTP-binding protein 1 yes no 3 0.00036322 67.019 1 3 0.61252 0.86352 15.703 3 Median 0.85936 1.0334 NaN 1 0 Median 0.57368 0.80781 9.431 2 0 Median 18329000 10391000 7938100 5033000 2525400 2507600 13296000 7865700 5430500 1407 585 1518 2272;2273;2274;2275 3714;3715;3716;3717 3716 4 KLEFGSPK QPQQGSGLCEKDVKKKLEFGSPKGRSGSLL CEKDVKKKLEFGSPKGRSGSLLQVEETERE K K L P K G 0 0 0 0 0 0 1 1 0 0 1 2 0 1 1 1 0 0 0 0 0 0 8 1 904.50182 Q8WYL5 Q8WYL5 571 578 SSH1 Protein phosphatase Slingshot homolog 1 yes yes 2 0.0014078 77.744 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1408 896 1519 2276 3718;3719 3718 1517 0 KLEGGGERR VKGTGANGSFKLNRKKLEGGGERRGAPAAA FKLNRKKLEGGGERRGAPAAATAPAPTAHK K K L R R G 0 2 0 0 0 0 2 3 0 0 1 1 0 0 0 0 0 0 0 0 0 0 9 2 1000.5414 Q92522 Q92522 120 128 H1FX Histone H1x yes yes 3 0.010601 37.191 1 0.46653 0.59033 NaN 1 Median NaN NaN NaN 0 0 Median 0.46653 0.59033 NaN 1 0 Median 6415600 4083100 2332500 0 0 0 6415600 4083100 2332500 1409 898 1520 2277 3720 3720 1 KLEKEEEEGISQESSEEEQ KTTTTPGRKPRGRPKKLEKEEEEGISQESS EEEEGISQESSEEEQ_______________ K K L E Q - 0 0 0 0 0 2 9 1 0 1 1 2 0 0 0 3 0 0 0 0 0 0 19 2 2235.9867 P17096;Q6ZP45;Q5T6U8 P17096 89 107 HMGA1 High mobility group protein HMG-I/HMG-Y no no 2;3 1.4182E-269 188.54 8 2 0.94926 1.1315 NaN 1 Median 0.94926 1.1315 NaN 1 0 Median NaN NaN NaN 0 0 Median 316410000 160490000 155920000 316410000 160490000 155920000 0 0 0 1410 740;846 1521;1522;1523 2278;2279;2280;2281;2282;2283;2284;2285;2286;2287 3721;3722;3723;3724;3725;3726;3727;3728;3729;3730;3731;3732;3733;3734;3735;3736;3737 3723 1155;1156;1157 3 KLERPPETPTVDPTVK EEGRPGKKLKKVKLRKLERPPETPTVDPTV LERPPETPTVDPTVKYERQPEYLDATGGTL R K L V K Y 0 1 0 1 0 0 2 0 0 0 1 2 0 0 4 0 3 0 0 2 0 0 16 2 1805.9887 B3KY63;F5GWX5;A0A0C4DGG9;Q14839 B3KY63 670 685 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 3 0.00037425 40.187 1 1.1671 1.6615 NaN 1 Median NaN NaN NaN 0 0 Median 1.1671 1.6615 NaN 1 0 Median 29893000 14134000 15759000 0 0 0 29893000 14134000 15759000 1411 244 1524 2288 3738 3738 1 KLETEETVPETDVETK MEKFTDADKETEIVKKLETEETVPETDVET LETEETVPETDVETKKPEVASWVHFDNLKG K K L T K K 0 0 0 1 0 0 5 0 0 0 1 2 0 0 1 0 4 0 0 2 0 0 16 1 1846.9048 B2R5U7;Q03701 B2R5U7 659 674 CEBPZ CCAAT/enhancer-binding protein zeta yes no 3 0.0074982 15.155 1 0.68485 0.83252 NaN 1 Median NaN NaN NaN 0 0 Median 0.68485 0.83252 NaN 1 0 Median 7425400 4345700 3079600 0 0 0 7425400 4345700 3079600 1412 402 1525 2289 3739;3740 3740 2 KLGAGEGGEASVSPEK GDQPAARTPRSKKKKKLGAGEGGEASVSPE LGAGEGGEASVSPEKTSTTSKGKAKRDKAS K K L E K T 2 0 0 0 0 0 3 4 0 0 1 2 0 0 1 2 0 0 0 1 0 0 16 1 1514.7577 E7ETY2;J3KQ96;Q13428;B4DRA2;Q9UFD4 E7ETY2 1366 1381 TCOF1;DKFZp434G1035 Treacle protein yes no 2;3 0 233.46 3 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1413 608 1526;1527 2290;2291;2292;2293;2294;2295 3741;3742;3743;3744;3745;3746;3747;3748;3749;3750;3751 3743 914;915 0 KLGVSVSPSR DEWKDPWRRSKSPKKKLGVSVSPSRARRRR KSPKKKLGVSVSPSRARRRRKTSASSASAS K K L S R A 0 1 0 0 0 0 0 1 0 0 1 1 0 0 1 3 0 0 0 2 0 0 10 1 1028.5978 E7ERS3;B4DTK7;Q86VM9;Q86YU5;H3BP01 E7ERS3 552 561 ZC3H18;FLJ00419 Zinc finger CCCH domain-containing protein 18 yes no 2 0.0020781 61.42 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1414 498 1528 2296;2297 3752;3753;3754 3754 730;731 0 KLIDLESPTPESQK SPKPTSKSTIEEDLKKLIDLESPTPESQKS KKLIDLESPTPESQKSFKFHALSSPQSPFP K K L Q K S 0 0 0 1 0 1 2 0 0 1 2 2 0 0 2 2 1 0 0 0 0 0 14 1 1583.8407 Q5CZ77;F5GYF8;B4DYX7;A6H8W6;O43166 Q5CZ77 94 107 DKFZp686G1344;SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 yes no 2 0.00047111 50.305 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1415 323 1529 2298 3755 3755 493;1844 0 KLNYEENK EAVKRLKEKLEAEMKKLNYEENKEESLLEK KLEAEMKKLNYEENKEESLLEKRRQLSRDI K K L N K E 0 0 2 0 0 0 2 0 0 0 1 2 0 0 0 0 0 0 1 0 0 0 8 1 1036.5189 B7ZLZ7;A0A024R158;O95347;A8K984;B3KMB1;Q2KQ72;Q05BV1 B7ZLZ7 467 474 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 yes no 2 0.0063455 78.192 1 0.60405 0.7428 NaN 1 Median NaN NaN NaN 0 0 Median 0.60405 0.7428 NaN 1 0 Median 9490400 5941100 3549300 0 0 0 9490400 5941100 3549300 1416 27 1530 2299 3756 3756 1 KLPFQR REIRRYQKSTELLIRKLPFQRLVREIAQDF QKSTELLIRKLPFQRLVREIAQDFKTDLRF R K L Q R L 0 1 0 0 0 1 0 0 0 0 1 1 0 1 1 0 0 0 0 0 0 0 6 1 787.47046 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;Q6NXT2;K7EMV3;B4DEB1;B2R6Y1;A8K4Y7;K7ES00;K7EP01;Q6TXQ4;Q5TEC6 B4E380 65 70 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C no no 2 7.1719E-11 109.6 2 7 0.55791 0.93071 6.175 8 Median 0.7197 0.93331 0.63907 2 0 Median 0.5487 0.91078 6.8522 6 0 Median 5596400000 3547600000 2048800000 178000000 100000000 77999000 5418400000 3447600000 1970800000 1417 399;849 1531 2300;2301;2302;2303;2304;2305;2306;2307;2308 3757;3758;3759;3760;3761;3762;3763;3764;3765;3766;3767;3768;3769;3770;3771;3772 3760 16 KLPPPPGSPLGHSPTASPPPTAR EARSPSDLHISPLAKKLPPPPGSPLGHSPT PLGHSPTASPPPTARKMFPGLAAPSLPKKL K K L A R K 2 1 0 0 0 0 0 2 1 0 2 1 0 0 9 3 2 0 0 0 0 0 23 1 2258.2172 B9EGQ5;M0QXA7;O95785;B3KR89 B9EGQ5 320 342 WIZ Protein Wiz yes no 3 5.7738E-11 50.413 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1418 554 1532 2309 3773 3773 819;820;1903 0 KLQEVDSLWK ETSVGYAIFKVLNEKKLQEVDSLWKEFETP VLNEKKLQEVDSLWKEFETPEKANKIVKLK K K L W K E 0 0 0 1 0 1 1 0 0 0 2 2 0 0 0 1 0 1 0 1 0 0 10 1 1244.6765 Q9Y2X3;B4DUY3;F8WED0 Q9Y2X3 21 30 NOP58 Nucleolar protein 58 yes no 2 0.023608 27.772 1 0.42759 0.51813 NaN 1 Median NaN NaN NaN 0 0 Median 0.42759 0.51813 NaN 1 0 Median 6808400 4786600 2021800 0 0 0 6808400 4786600 2021800 1419 964 1533 2310 3774 3774 0 KLQLEETMPSPYGR SGKAIKGKVGKPKVKKLQLEETMPSPYGRR KKLQLEETMPSPYGRRIIPEITAMKADASK K K L G R R 0 1 0 0 0 1 2 1 0 0 2 1 1 0 2 1 1 0 1 0 0 0 14 1 1647.829 Q02880;Q71UH4;Q59H80;B4DLV2;Q8WTY5;B4DKD0;B7ZB27 Q02880 1227 1240 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 3 0.00085195 42.568 1 0.37804 0.50437 NaN 1 Median NaN NaN NaN 0 0 Median 0.37804 0.50437 NaN 1 0 Median 9723900 6782500 2941400 0 0 0 9723900 6782500 2941400 1420 796 1534 2311 3775 3775 190 1 KLSETEDSVIIIDSSPTALK PLRRSSRHQTLPERKKLSETEDSVIIIDSS EDSVIIIDSSPTALKHPEKNQKKLQCLNDV K K L L K H 1 0 0 2 0 0 2 0 0 3 2 2 0 0 1 4 2 0 0 1 0 0 20 1 2145.1416 A0A075B754;Q96QE3;H0UIC2 A0A075B754 742 761 ATAD5 ATPase family AAA domain-containing protein 5 yes no 2;3 5.3884E-15 72.898 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1421 177 1535 2312;2313 3776;3777 3777 242;243 0 KLSPIIEDSR QTACGTIYSQTLSIKKLSPIIEDSREATHS TLSIKKLSPIIEDSREATHSSGFSGSSASV K K L S R E 0 1 0 1 0 0 1 0 0 2 1 1 0 0 1 2 0 0 0 0 0 0 10 1 1156.6452 O60566 O60566 668 677 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 2 2.1611E-20 117.7 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1422 705 1536 2314;2315 3778;3779;3780;3781 3779 1047 0 KLSVPTSDEEDEVPAPK VDDDGEEKELMERLKKLSVPTSDEEDEVPA SVPTSDEEDEVPAPKPRGGKKTKGGNVFAA K K L P K P 1 0 0 2 0 0 3 0 0 0 1 2 0 0 3 2 1 0 0 2 0 0 17 1 1839.9102 Q5STZ8;B4DNU2;Q2L6I2;Q8NE71;F5GYK6;A0PJ72 Q5STZ8 104 120 ABCF1 ATP-binding cassette sub-family F member 1 yes no 2;3 2.6008E-08 73.279 3 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1423 488 1537;1538 2316;2317;2318;2319 3782;3783;3784;3785;3786;3787 3783 717;718;1883 0 KLSVPTSDEEDEVPAPKPR VDDDGEEKELMERLKKLSVPTSDEEDEVPA PTSDEEDEVPAPKPRGGKKTKGGNVFAALI K K L P R G 1 1 0 2 0 0 3 0 0 0 1 2 0 0 4 2 1 0 0 2 0 0 19 2 2093.0641 Q5STZ8;B4DNU2;Q2L6I2;Q8NE71;F5GYK6;A0PJ72 Q5STZ8 104 122 ABCF1 ATP-binding cassette sub-family F member 1 yes no 3 3.3772E-08 66.871 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1424 488 1539 2320 3788 3788 717;718;1883 0 KLTQTSGETTHTDK PLEKRDVQKELSALKKLTQTSGETTHTDKV KKLTQTSGETTHTDKVPGGEDKSINAFRET K K L D K V 0 0 0 1 0 1 1 1 1 0 1 2 0 0 0 1 5 0 0 0 0 0 14 1 1545.7635 P46013 P46013 1409 1422 MKI67 Antigen KI-67 yes yes 3 2.5485E-43 133.93 1 0.97204 1.1656 NaN 1 Median NaN NaN NaN 0 0 Median 0.97204 1.1656 NaN 1 0 Median 69734000 33819000 35915000 0 0 0 69734000 33819000 35915000 1425 762 1540 2321 3789;3790 3789 2 KLTQTSGETTHTDKVPGGEDK PLEKRDVQKELSALKKLTQTSGETTHTDKV GETTHTDKVPGGEDKSINAFRETAKQKLDP K K L D K S 0 0 0 2 0 1 2 3 1 0 1 3 0 0 1 1 5 0 0 1 0 0 21 2 2228.0921 P46013 P46013 1409 1429 MKI67 Antigen KI-67 yes yes 4 7.1904E-11 58.49 4 1.0595 1.3985 9.6385 3 Median 1.0595 1.3985 9.6385 3 0 Median NaN NaN NaN 0 0 Median 52826000 21709000 31118000 52826000 21709000 31118000 0 0 0 1426 762 1541 2322;2323;2324;2325 3791;3792;3793;3794;3795;3796;3797;3798 3795 8 KLTSDEEGEPSGK EGSEEDKAQRLLKAKKLTSDEEGEPSGKRK AKKLTSDEEGEPSGKRKAEDDDKANKKHKK K K L G K R 0 0 0 1 0 0 3 2 0 0 1 2 0 0 1 2 1 0 0 0 0 0 13 1 1375.6467 B4DNM0;Q8WVC0 B4DNM0 605 617 LEO1 RNA polymerase-associated protein LEO1 yes no 2 4.0628E-42 130.21 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1427 487 1542 2326 3799 3799 710 0 KLTVNPGTK YPLEIDYGQDEEAVKKLTVNPGTKSKLPKP DEEAVKKLTVNPGTKSKLPKPVQDLIKMIF K K L T K S 0 0 1 0 0 0 0 1 0 0 1 2 0 0 1 0 2 0 0 1 0 0 9 1 956.56548 A0A024R3T8;P09874;B2R5W3;B4E0E1 A0A024R3T8 654 662 PARP1 Poly [ADP-ribose] polymerase 1 yes no 2 0.006318 61.48 1 0.39937 0.48159 NaN 1 Median NaN NaN NaN 0 0 Median 0.39937 0.48159 NaN 1 0 Median 49371000 34296000 15075000 0 0 0 49371000 34296000 15075000 1428 56 1543 2327 3800;3801 3801 2 KLVETDFSTPTPR YHKSNGGIVWGNIKKKLVETDFSTPTPRRK KKKLVETDFSTPTPRRKTPFNTDLGENSGI K K L P R R 0 1 0 1 0 0 1 0 0 0 1 1 0 1 2 1 3 0 0 1 0 0 13 1 1489.7777 Q6P0N0 Q6P0N0 1079 1091 MIS18BP1 Mis18-binding protein 1 yes yes 2 0.0019056 44.925 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1429 858 1544 2328 3802 3802 2010;2011 0 KLVPLSK QYLIRIRKLTLKRQRKLVPLSKKVERREKR KLTLKRQRKLVPLSKKVERREKRREEKALI R K L S K K 0 0 0 0 0 0 0 0 0 0 2 2 0 0 1 1 0 0 0 1 0 0 7 1 783.52182 Q9BXY0 Q9BXY0 133 139 MAK16 Protein MAK16 homolog yes yes 2 0.0038978 58.194 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1929900 1929900 0 0 0 0 1929900 1929900 0 1430 921 1545 2329 3803 3803 1 KLYDIDVAK VDVKANKHQIKQAVKKLYDIDVAKVNTLIR IKQAVKKLYDIDVAKVNTLIRPDGEKKAYV K K L A K V 1 0 0 2 0 0 0 0 0 1 1 2 0 0 0 0 0 0 1 1 0 0 9 1 1063.5914 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 117 125 RPL23A 60S ribosomal protein L23a yes no 2 5.8654E-05 93.325 1 2 0.42278 0.50208 56.97 3 Median 0.97156 1.198 NaN 1 0 Median 0.37919 0.45368 14.336 2 0 Median 150280000 103100000 47176000 17693000 9215900 8477400 132590000 93889000 38698000 1431 385 1546 2330;2331;2332 3804;3805;3806;3807;3808;3809 3805 6 KMGSDEFDISPR IYAKQQALEAQKRKKKMGSDEFDISPRISK RKKKMGSDEFDISPRISKQQEGSSASSVDL K K M P R I 0 1 0 2 0 0 1 1 0 1 0 1 1 1 1 2 0 0 0 0 0 0 12 1 1380.6344 B9EGR5;Q8IWI9 B9EGR5 2323 2334 MGA MAX gene-associated protein yes no 2 0.00078005 54.44 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1432 555 1547;1548 2333;2334 3810;3811 3810 107 829;830 0 KNDMDEPPSGDFGGDEEK QLELHCQVMFRNYQRKNDMDEPPSGDFGGD MDEPPSGDFGGDEEKSRKRKNKDPKFAEME R K N E K S 0 0 1 4 0 0 3 3 0 0 0 2 1 1 2 1 0 0 0 0 0 0 18 1 1965.7898 B3KY63;F5GWX5;A0A0C4DGG9;Q14839 B3KY63 551 568 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 3 6.3605E-06 45.916 1 1.0337 1.2878 NaN 1 Median NaN NaN NaN 0 0 Median 1.0337 1.2878 NaN 1 0 Median 12029000 6436100 5593000 0 0 0 12029000 6436100 5593000 1433 244 1549 2335 3812 3812 52 1 KNYEDEDSLK AEINNIIKIVGLQYKKNYEDEDSLKTLRYG GLQYKKNYEDEDSLKTLRYGKIMIMTDQDQ K K N L K T 0 0 1 2 0 0 2 0 0 0 1 2 0 0 0 1 0 0 1 0 0 0 10 1 1239.5619 P11388 P11388 520 529 TOP2A DNA topoisomerase 2-alpha yes yes 2 0.00011163 91.752 1 0.7378 0.90316 NaN 1 Median NaN NaN NaN 0 0 Median 0.7378 0.90316 NaN 1 0 Median 26369000 14420000 11949000 0 0 0 26369000 14420000 11949000 1434 734 1550 2336 3813;3814 3814 2 KPAEYGYVSLGR LSDLFSDDYGGKNCKKPAEYGYVSLGRLGA NCKKPAEYGYVSLGRLGAAKGALHPGCFAP K K P G R L 1 1 0 0 0 0 1 2 0 0 1 1 0 0 1 1 0 0 2 1 0 0 12 1 1338.6932 P17676 P17676 133 144 CEBPB CCAAT/enhancer-binding protein beta yes yes 3 0.023108 17.8 1 1.6392 2.1367 NaN 1 Median NaN NaN NaN 0 0 Median 1.6392 2.1367 NaN 1 0 Median 7057100 1956300 5100900 0 0 0 7057100 1956300 5100900 1435 741 1551 2337 3815 3815 1 KPAPPQHFSPR THMPTILDDPGKKVKKPAPPQHFSPRTAQG KKVKKPAPPQHFSPRTAQGLPGTSNSNSSR K K P P R T 1 1 0 0 0 1 0 0 1 0 0 1 0 1 4 1 0 0 0 0 0 0 11 1 1260.6727 A0A075B784;A0A024R8V6;Q9P275;B3KMW2 A0A075B784 538 548 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 yes no 3 0.0001536 79.614 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1436 107 1552 2338 3816;3817 3816 160 0 KPATPAEDDEDDDIDLFGSDNEEEDK WQHVSPMRQVEPPAKKPATPAEDDEDDDID DDIDLFGSDNEEEDKEAAQLREERLRQYAE K K P D K E 2 0 1 8 0 0 5 1 0 1 1 2 0 1 2 1 1 0 0 0 0 0 26 1 2908.1894 H0YE72;E9PL71;E9PQ49;E9PI39;E9PQZ1;E9PK01;Q9BW34;A0A087X1X7;Q71RH4;Q9H7G6;D3DWK1;B2RAR6;E9PRY8;P29692 H0YE72 19 44 EEF1D Elongation factor 1-delta yes no 3 2.862E-99 145.06 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1437 208 1553 2339 3818;3819 3818 288 0 KPATSYVR GKGVVVVIKRRSGQRKPATSYVRTTINKNA KRRSGQRKPATSYVRTTINKNARATLSSIR R K P V R T 1 1 0 0 0 0 0 0 0 0 0 1 0 0 1 1 1 0 1 1 0 0 8 1 920.50797 H0YKD8;P46779 H0YKD8 72 79 RPL28 60S ribosomal protein L28 yes no 2 0.017625 57.047 1 0.6396 1.0066 NaN 1 Median NaN NaN NaN 0 0 Median 0.6396 1.0066 NaN 1 0 Median 98918000 59553000 39365000 0 0 0 98918000 59553000 39365000 1438 656 1554 2340 3820 3820 1 KPDAKPENFITQIETTPTETASR HLQRIHQEVFSSCHRKPDAKPENFITQIET FITQIETTPTETASRKTSDVVLKRKQTKDC R K P S R K 2 1 1 1 0 1 3 0 0 2 0 2 0 1 3 1 5 0 0 0 0 0 23 2 2573.2973 B4E071;Q53FM2;B2R9C5;Q96IY1 B4E071 186 208 C1orf48;NSL1 Kinetochore-associated protein NSL1 homolog yes no 3 6.7702E-08 46.178 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1439 410 1555 2341 3821 3821 1869;1870 0 KPDSVSLHCR DTEETPHRWWIETCKKPDSVSLHCRQEAIF IETCKKPDSVSLHCRQEAIFELLGGITSPA K K P C R Q 0 1 0 1 1 0 0 0 1 0 1 1 0 0 1 2 0 0 0 1 0 0 10 1 1197.5924 Q96F88;Q99575 Q96F88 473 482 POP1 Ribonucleases P/MRP protein subunit POP1 yes no 3 2.7861E-05 64.439 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 6275700 6275700 0 6275700 6275700 0 0 0 0 1440 901 1556 2342 3822 3822 1 KPEEEEEEELEETAQEK EEISSDSESESLAPRKPEEEEEEELEETAQ EEEEEEELEETAQEKKLRLAKLYLEQLRQQ R K P E K K 1 0 0 0 0 1 10 0 0 0 1 2 0 0 1 0 1 0 0 0 0 0 17 1 2074.9066 O43818 O43818 62 78 RRP9 U3 small nucleolar RNA-interacting protein 2 yes yes 3 1.2034E-28 98.227 1 0.5755 0.7004 NaN 1 Median NaN NaN NaN 0 0 Median 0.5755 0.7004 NaN 1 0 Median 32666000 20725000 11942000 0 0 0 32666000 20725000 11942000 1441 703 1557 2343 3823;3824 3824 2 KPFSQHVR YPTEDVPRKLLSHGKKPFSQHVRKLRASIT KLLSHGKKPFSQHVRKLRASITPGTILIIL K K P V R K 0 1 0 0 0 1 0 0 1 0 0 1 0 1 1 1 0 0 0 1 0 0 8 1 997.54575 Q8TBK5;Q8N5Z7;A0A024RBK3;Q02878;B4DRX3;B2R4K7;Q9HBB3;F8VR69;F8VZ45;U3KQR5 Q8TBK5 131 138 RPL6 60S ribosomal protein L6 yes no 3 0.00044421 86.953 1 1 0.73059 0.94572 NaN 1 Median 0.73059 0.94572 NaN 1 0 Median NaN NaN NaN 0 0 Median 120120000 68079000 52039000 120120000 68079000 52039000 0 0 0 1442 146 1558 2344;2345 3825;3826;3827;3828;3829;3830 3828 6 KPGPPLSPEIRSPAGSPELR PEHWKAVPPVSPELRKPGPPLSPEIRSPAG LSPEIRSPAGSPELRKPSGSPDLWKLSPDQ R K P L R K 1 2 0 0 0 0 2 2 0 1 2 1 0 0 6 3 0 0 0 0 0 0 20 2 2084.1378 Q96JM3 Q96JM3 421 440 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 3 8.3973E-13 68.657 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1443 906 1559 2346 3831 3831 1550;1551;1552 0 KPIKYLEESDEDDLF FDSAVAPRAKSVRAKKPIKYLEESDEDDLF KPIKYLEESDEDDLF_______________ K K P L F - 0 0 0 3 0 0 3 0 0 1 2 2 0 1 1 1 0 0 1 0 0 0 15 2 1839.8778 P11388;J3QR57 P11388 1517 1531 TOP2A DNA topoisomerase 2-alpha yes no 2 0.00080928 46.318 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1444 734 1560 2347 3832 3832 1142 0 KPLPDHVSIVEPK KIMLPWDPTGKIGPKKPLPDHVSIVEPKDE PKKPLPDHVSIVEPKDEILPTTPISEQKGG K K P P K D 0 0 0 1 0 0 1 0 1 1 1 2 0 0 3 1 0 0 0 2 0 0 13 1 1457.8242 E9PPU1;H0YEU2;E9PL09;Q53G83;P23396;E9PSF4;Q9NQS8 E9PPU1 117 129 RPS3 40S ribosomal protein S3 yes no 3 8.4254E-43 133.48 1 1.5003 1.8177 NaN 1 Median NaN NaN NaN 0 0 Median 1.5003 1.8177 NaN 1 0 Median 38569000 14792000 23777000 0 0 0 38569000 14792000 23777000 1445 625 1561 2348 3833 3833 1 KPLTPYFR PYKGKKLKKHPDFPKKPLTPYFRFFMEKRA KHPDFPKKPLTPYFRFFMEKRAKYAKLHPE K K P F R F 0 1 0 0 0 0 0 0 0 0 1 1 0 1 2 0 1 0 1 0 0 0 8 1 1020.5757 B4DNQ1;E9PKP7;A8K962;P17480;Q05BZ1;E9PMM2;Q9BQR2 B4DNQ1 48 55 UBTF Nucleolar transcription factor 1 yes no 2;3 0.00098621 86.095 2 0.76575 1.1327 6.4293 2 Median NaN NaN NaN 0 0 Median 0.76575 1.1327 6.4293 2 0 Median 99394000 55652000 43741000 0 0 0 99394000 55652000 43741000 1446 376 1562 2349;2350 3834;3835;3836;3837 3834 4 KPLTVLNK PRFSIAPSSLDPSNRKPLTVLNKGLENPLP SLDPSNRKPLTVLNKGLENPLPERPREKEE R K P N K G 0 0 1 0 0 0 0 0 0 0 2 2 0 0 1 0 1 0 0 1 0 0 8 1 911.5804 B4E083;Q59GD0;B2R841;P53350;I3L2H5;D3DWF3 B4E083 241 248 PLK1 Serine/threonine-protein kinase PLK;Serine/threonine-protein kinase PLK1 yes no 2 0.024457 47.594 1 1.0054 1.226 NaN 1 Median NaN NaN NaN 0 0 Median 1.0054 1.226 NaN 1 0 Median 8084100 4074400 4009800 0 0 0 8084100 4074400 4009800 1447 407 1563 2351 3838 3838 1 KPMKTSPEMDIQNPDDGAR VFVLAERIEINRNEKKPMKTSPEMDIQNPD TSPEMDIQNPDDGARKPIPRDKVTENKRCL K K P A R K 1 1 1 3 0 1 1 1 0 1 0 2 2 0 3 1 1 0 0 0 0 0 19 2 2128.9881 P46013;B4DRH3 P46013 3123 3141 MKI67 Antigen KI-67 yes no 3 8.6261E-09 65.47 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1448 762 1564 2352 3839 3839 177;178 1221;1977 0 KPNPVEEEPSR SGDEGIKVLKQRAKKKPNPVEEEPSRRRPR RAKKKPNPVEEEPSRRRPRAPKEKAQPLED K K P S R R 0 1 1 0 0 0 3 0 0 0 0 1 0 0 3 1 0 0 0 1 0 0 11 1 1280.6361 P46013 P46013 2653 2663 MKI67 Antigen KI-67 yes yes 3 0.0034868 32.068 1 0.99819 1.3668 NaN 1 Median NaN NaN NaN 0 0 Median 0.99819 1.3668 NaN 1 0 Median 12424000 5473200 6950900 0 0 0 12424000 5473200 6950900 1449 762 1565 2353 3840 3840 1 KPPTDEELK SEDSSDDEPLIKKLKKPPTDEELKETIKKL LIKKLKKPPTDEELKETIKKLLASANLEEV K K P L K E 0 0 0 1 0 0 2 0 0 0 1 2 0 0 2 0 1 0 0 0 0 0 9 1 1055.5499 P35659;B4DFG0;B4DNW3;H0Y993 P35659 318 326 DEK Protein DEK yes no 2 0.0023731 67.726 1 0.54382 0.6467 NaN 1 Median NaN NaN NaN 0 0 Median 0.54382 0.6467 NaN 1 0 Median 116340000 73939000 42404000 0 0 0 116340000 73939000 42404000 1450 754 1566 2354 3841;3842 3841 2 KPSAPSPPDQTPEEDLVIVK ______________________________ SPPDQTPEEDLVIVKVEEDHGWDQESSLHE R K P V K V 1 0 0 2 0 1 2 0 0 1 1 2 0 0 5 2 1 0 0 2 0 0 20 1 2146.1158 A0A024RCK7;Q15776 A0A024RCK7 7 26 ZNF192;ZKSCAN8 Zinc finger protein with KRAB and SCAN domains 8 yes no 3 1.1807E-10 57.922 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1451 159 1567 2355 3843 3843 219 0 KPSVSEEVQATPNK AKLLLEKIQSRKVERKPSVSEEVQATPNKA RKPSVSEEVQATPNKAGPKLKDPPQGYFGP R K P N K A 1 0 1 0 0 1 2 0 0 0 0 2 0 0 2 2 1 0 0 2 0 0 14 1 1512.7784 Q9UKJ3 Q9UKJ3 1105 1118 GPATCH8 G patch domain-containing protein 8 yes yes 2 0.0013798 49.066 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1452 955 1568 2356 3844 3844 1714 0 KPVTVHSR RQQIRKLIKDGLIIRKPVTVHSRARCRKNT KDGLIIRKPVTVHSRARCRKNTLARRKGRH R K P S R A 0 1 0 0 0 0 0 0 1 0 0 1 0 0 1 1 1 0 0 2 0 0 8 1 922.53485 Q8IWR8;J3QR09;J3KTE4;Q53G49;P84098;J3QL15 Q8IWR8 34 41 RPL19 Ribosomal protein L19;60S ribosomal protein L19 yes no 3 0.0022739 51.193 1 0.36146 0.56379 NaN 1 Median NaN NaN NaN 0 0 Median 0.36146 0.56379 NaN 1 0 Median 67170000 47317000 19854000 0 0 0 67170000 47317000 19854000 1453 682 1569 2357 3845;3846;3847;3848 3846 4 KPYGVLYK NATVTKVLKDVYALKKPYGVLYKKKNITRP KDVYALKKPYGVLYKKKNITRPFEDQTSLE K K P Y K K 0 0 0 0 0 0 0 1 0 0 1 2 0 0 1 0 0 0 2 1 0 0 8 1 966.55385 A8K800;Q9H7B2;Q5VXN0;B4DWS5 A8K800 57 64 RPF2 Ribosome production factor 2 homolog yes no 2 6.8685E-08 104.21 1 0.63747 0.76943 NaN 1 Median NaN NaN NaN 0 0 Median 0.63747 0.76943 NaN 1 0 Median 46574000 29455000 17119000 0 0 0 46574000 29455000 17119000 1454 371 1570 2358 3849;3850 3849 2 KPYRIESDEEEDFENVGK DSQPRVLPSEQESTKKPYRIESDEEEDFEN RIESDEEEDFENVGKVGSPLDYSLVDLPST K K P G K V 0 1 1 2 0 0 5 1 0 1 0 2 0 1 1 1 0 0 1 1 0 0 18 2 2183.0019 Q96T23 Q96T23 1339 1356 RSF1 Remodeling and spacing factor 1 yes yes 3 1.1832E-05 45.395 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1455 910 1571 2359 3851 3851 1566 0 KQDEEERELR SDLLSQAQYHVARARKQDEEERELRAKQEQ VARARKQDEEERELRAKQEQEKELLRQKLL R K Q L R A 0 2 0 1 0 1 4 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 10 2 1330.6477 A8K6X9;Q6PD62 A8K6X9 833 842 CTR9 RNA polymerase-associated protein CTR9 homolog yes no 3 0.0020087 50.284 1 0.67795 0.83688 NaN 1 Median 0.67795 0.83688 NaN 1 0 Median NaN NaN NaN 0 0 Median 11189000 7270400 3919100 11189000 7270400 3919100 0 0 0 1456 366 1572 2360 3852 3852 1 KQEEGAEIQCEAETGGTHKR SGLVPKKKQSVVQEKKQEEGAEIQCEAETG AEIQCEAETGGTHKRDFSEIKSQQCQGNEL K K Q K R D 2 1 0 0 1 2 5 3 1 1 0 2 0 0 0 0 2 0 0 0 0 0 20 2 2257.0393 A0A024R0F1;Q9UNY4 A0A024R0F1 195 214 TTF2 Transcription termination factor 2 yes no 4 0.020439 12.133 1 0.80404 0.9618 NaN 1 Median 0.80404 0.9618 NaN 1 0 Median NaN NaN NaN 0 0 Median 8289900 3568400 4721400 8289900 3568400 4721400 0 0 0 1457 15 1573 2361 3853 3853 1 KQEELVQQVR QPLCKAFMVTDEDIRKQEELVQQVRKRLEE DEDIRKQEELVQQVRKRLEEALMADMLAHV R K Q V R K 0 1 0 0 0 3 2 0 0 0 1 1 0 0 0 0 0 0 0 2 0 0 10 1 1255.6884 O95983;B3KMA8;K7EIE8 O95983 227 236 MBD3 Methyl-CpG-binding domain protein 3 yes no 2 0.010022 54.982 1 1.026 1.3749 NaN 1 Median NaN NaN NaN 0 0 Median 1.026 1.3749 NaN 1 0 Median 10296000 4682700 5613400 0 0 0 10296000 4682700 5613400 1458 723 1574 2362 3854;3855 3855 2 KQEGPATQVDSAVGTLPATSPQSTSVQAK GASSSKESSRISDGKKQEGPATQVDSAVGT TLPATSPQSTSVQAKGTNKLRKPKLPEVQQ K K Q A K G 4 0 0 1 0 4 1 2 0 0 1 2 0 0 3 4 4 0 0 3 0 0 29 1 2882.4621 E7ETY2;J3KQ96;B4DRA2 E7ETY2 1091 1119 TCOF1 yes no 3 3.9168E-27 69.444 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1459 608 1575 2363 3856;3857;3858 3856 916;1920 0 KQEQLTPGVVYVR QKEVAQVRKRITQRKKQEQLTPGVVYVRHL RKKQEQLTPGVVYVRHLPNLLDETQIFSYF K K Q V R H 0 1 0 0 0 2 1 1 0 0 1 1 0 0 1 0 1 0 1 3 0 0 13 1 1515.8409 Q9BYG3;B4DSM4 Q9BYG3 38 50 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein yes no 3 0.00013419 54.199 2 0.76927 1.1471 NaN 1 Median NaN NaN NaN 0 0 Median 0.76927 1.1471 NaN 1 0 Median 23898000 15299000 8598200 0 0 0 23898000 15299000 8598200 1460 922 1576 2364;2365 3859;3860 3860 2 KQETAAVCGETDEEAGESGGEGIFR EDPELPDTRPLHLAKKQETAAVCGETDEEA TDEEAGESGGEGIFRERDEFVIRAEDIPSL K K Q F R E 3 1 0 1 1 1 6 5 0 1 0 1 0 1 0 1 2 0 0 1 0 0 25 1 2626.1453 Q9ULL5 Q9ULL5 730 754 PRR12 Proline-rich protein 12 yes yes 3 1.0602E-15 62.666 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1461 956 1577 2366 3861 3861 1715;2055 0 KQISNLQQSISDAEQR NRVIQRLRSEIDNVKKQISNLQQSISDAEQ QISNLQQSISDAEQRGENALKDAKNKLNDL K K Q Q R G 1 1 1 1 0 4 1 0 0 2 1 1 0 0 0 3 0 0 0 0 0 0 16 1 1843.9388 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;H6VRG2;H6VRF9;CON__P04264 H6VRG3 417 432 KRT1 Keratin, type II cytoskeletal 1 yes no 3 0.0086643 29.099 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1768500 1768500 0 1768500 1768500 0 0 0 0 + 1462 670 1578 2367 3862 3862 1 KQPPKEPSEVPTPK QEKDGTEKRGRGRPRKQPPKEPSEVPTPKR RKQPPKEPSEVPTPKRPRGRPKGSKNKGAA R K Q P K R 0 0 0 0 0 1 2 0 0 0 0 3 0 0 5 1 1 0 0 1 0 0 14 2 1560.8512 Q5T6U8;Q6IPL9 Q5T6U8 31 44 HMGA1 yes no 3;4 1.4151E-07 97.69 2 2 0.69533 1.0041 14.024 3 Median 0.88816 1.1886 NaN 1 0 Median 0.65822 0.95052 7.756 2 0 Median 349430000 214930000 134500000 26089000 13963000 12126000 323340000 200960000 122380000 1463 846 1579;1580 2368;2369;2370;2371 3863;3864;3865;3866;3867;3868;3869;3870;3871 3865 2005 7 KQPPVSPGTALVGSQK QEKDGTEKRGRGRPRKQPPVSPGTALVGSQ QPPVSPGTALVGSQKEPSEVPTPKRPRGRP R K Q Q K E 1 0 0 0 0 2 0 2 0 0 1 2 0 0 3 2 1 0 0 2 0 0 16 1 1592.8886 P17096;B4DWA0;A0A024RCT9 P17096 31 46 HMGA1 High mobility group protein HMG-I/HMG-Y yes no 2;3 8.0062E-27 114.37 2 4 0.57145 0.68789 23.687 3 Median 0.80191 0.97807 NaN 1 0 Median 0.5492 0.65479 6.9755 2 0 Median 240980000 154340000 86641000 6771300 3239500 3531800 234210000 151100000 83109000 1464 740 1581;1582 2372;2373;2374;2375;2376;2377 3872;3873;3874;3875;3876;3877;3878;3879;3880 3875 1158 4 KQSEELQSVQAQEGALGTK LAHLERLETQVSRSRKQSEELQSVQAQEGA ELQSVQAQEGALGTKIHKLRRLRDELRAVV R K Q T K I 2 0 0 0 0 4 3 2 0 0 2 2 0 0 0 2 1 0 0 1 0 0 19 1 2030.028 Q9BU64 Q9BU64 33 51 CENPO Centromere protein O yes yes 3 1.7547E-07 58.073 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1465 917 1583 2378 3881 3881 1588 0 KREDSAPPSSVAR YAVQARRSRSITRKRKREDSAPPSSVARSG KRKREDSAPPSSVARSGSCSRTPRDVSGLR R K R A R S 2 2 0 1 0 0 1 0 0 0 0 1 0 0 2 3 0 0 0 1 0 0 13 2 1398.7215 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 552 564 GTPBP4 Nucleolar GTP-binding protein 1 yes no 3 0.027825 21.246 1 0.76118 0.92113 NaN 1 Median 0.76118 0.92113 NaN 1 0 Median NaN NaN NaN 0 0 Median 6426600 3408500 3018100 6426600 3408500 3018100 0 0 0 1466 585 1584 2379 3882 3882 1 KRESESESDETPPAAPQLIK KAPQVVAEAAKTAKRKRESESESDETPPAA SESDETPPAAPQLIKKEKKKSKKDKKAKAG R K R I K K 2 1 0 1 0 1 4 0 0 1 1 2 0 0 3 3 1 0 0 0 0 0 20 2 2211.1019 O60832 O60832 448 467 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 3 5.3931E-17 84.674 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1467 706 1585;1586 2380;2381 3883;3884 3884 1050;1051;1052 0 KRPEPSSDYDLSPAK YVENADGKVTVRRFRKRPEPSSDYDLSPAK KRPEPSSDYDLSPAKQEPKPFDRLQQLLPA R K R A K Q 1 1 0 2 0 0 1 0 0 0 1 2 0 0 3 3 0 0 1 0 0 0 15 2 1688.837 H7C231;H7BZ37;H7C2V9;A6NE70;B3KTC2;E3UVQ2;H9A532;Q6W2J9 H7C231 94 108 BCOR;BCOR-RARA BCL-6 corepressor yes no 3 0.0002162 56.347 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1468 324 1587 2382 3885 3885 495 0 KRQDISVHK KMQINDAKKTEKKKKKRQDISVHKLKL___ TEKKKKKRQDISVHKLKL____________ K K R H K L 0 1 0 1 0 1 0 0 1 1 0 2 0 0 0 1 0 0 0 1 0 0 9 2 1109.6305 O00566 O00566 670 678 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 yes yes 3 0.0038795 45.598 1 0.8323 0.99437 NaN 1 Median 0.8323 0.99437 NaN 1 0 Median NaN NaN NaN 0 0 Median 11476000 6200200 5275400 11476000 6200200 5275400 0 0 0 1469 695 1588 2383 3886 3886 1 KRQSPEPSPVTLGR SKLSLQESESKRRCRKRQSPEPSPVTLGRR RKRQSPEPSPVTLGRRSSGRQGGVHELSAF R K R G R R 0 2 0 0 0 1 1 1 0 0 1 1 0 0 3 2 1 0 0 1 0 0 14 2 1550.8529 D3DS96;Q9NRL2;B3KND8;Q59G54 D3DS96 1409 1422 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes no 3 0.00048983 51.348 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1470 591 1589 2384 3887;3888 3888 877;878 0 KRSESPPAELPSLR SGLQAKLASLRKSTKKRSESPPAELPSLRR KKRSESPPAELPSLRRSTRQKTTGSCASTS K K R L R R 1 2 0 0 0 0 2 0 0 0 2 1 0 0 3 3 0 0 0 0 0 0 14 2 1565.8526 Q14669;H7C1L9;G5E9G6 Q14669 308 321 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 3 0.00050267 50.425 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1471 814 1590 2385 3889 3889 1336;1337 0 KSDVEAIFSK NSRVFIGNLNTLVVKKSDVEAIFSKYGKIV TLVVKKSDVEAIFSKYGKIVGCSVHKGFAF K K S S K Y 1 0 0 1 0 0 1 0 0 1 0 2 0 1 0 2 0 0 0 1 0 0 10 1 1122.5921 G3V576;G3V4W0;B4DY08;B2R5W2;G3V4C1;B2R603;G3V2Q1;A8K9A4;P07910;B3KX96;G3V4M8;G3V5X6;G3V3K6;G3V251;B4DMJ1;B4DSU6;G3V555;G3V575;Q6PKD2;A0A0G2JPF8;A0A0G2JNQ3;P0DMR1;O60812;B7ZW38;B2RXH8;G3V2H6;Q569J8;D3DPI2 G3V576 30 39 HNRNPC;HNRPCL1;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2;HNRPC;hCG_1641229 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 yes no 2 1.9231E-79 179.2 1 1 0.60561 0.73102 7.9385 2 Median 0.55763 0.69112 NaN 1 0 Median 0.65773 0.77323 NaN 1 0 Median 244550000 150540000 94011000 9080300 6168200 2912100 235470000 144370000 91099000 1472 378 1591 2386;2387 3890;3891;3892 3892 3 KSEIEYYAMLAK KAKLVILANNCPALRKSEIEYYAMLAKTGV ALRKSEIEYYAMLAKTGVHHYSGNNIELGT R K S A K T 2 0 0 0 0 0 2 0 0 1 1 2 1 0 0 1 0 0 2 0 0 0 12 1 1444.7272 E5RI99;A0A024R9D3;P62888 E5RI99 57 68 RPL30 60S ribosomal protein L30 yes no 2 0.00044877 65.232 2 0.38139 0.46779 10.857 2 Median NaN NaN NaN 0 0 Median 0.38139 0.46779 10.857 2 0 Median 18169000 12248000 5920300 0 0 0 18169000 12248000 5920300 1473 115 1592 2388;2389 3893;3894 3894 23 2 KSPQEPTPSVIK KLIKTENPAEKLAEKKSPQEPTPSVIKFVT AEKKSPQEPTPSVIKFVTTPSKKPPVEPVA K K S I K F 0 0 0 0 0 1 1 0 0 1 0 2 0 0 3 2 1 0 0 1 0 0 12 1 1309.7242 A0A024R997;A0A024R9C2;Q8IXL1;P28324 A0A024R997 179 190 ELK4 ETS domain-containing protein Elk-4 yes no 2 0.0023508 50.088 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1474 111 1593 2390 3895;3896 3896 163 0 KSPVGKSPPSTGSTYGSSQK QGQFDHGSGSLSPSKKSPVGKSPPSTGSTY KSPPSTGSTYGSSQKEESAASGGAAYTKRY K K S Q K E 0 0 0 0 0 1 0 3 0 0 0 3 0 0 3 6 2 0 1 1 0 0 20 2 1978.996 Q9Y2W1;Q7Z5U1;Q05D20;Q6P0P7;Q6PJV4 Q9Y2W1 314 333 THRAP3 Thyroid hormone receptor-associated protein 3 yes no 3 1.3103E-08 47.099 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1475 963 1594;1595 2391;2392 3897;3898 3897 1744;1745 0 KSSGEIVYCGQVFEK KASGTLREYKLKKMKKSSGEIVYCGQVFEK KSSGEIVYCGQVFEKSPLRVKNFGIWLRYD K K S E K S 0 0 0 0 1 1 2 2 0 1 0 2 0 1 0 2 0 0 1 2 0 0 15 1 1729.8345 M0R0P7;M0R3D6;M0R1A7;M0R117;B4DM74;B2R4C0;Q02543;B4DM94;B4DUV3;Q53HD3 M0R0P7 17 31 RPL18A 60S ribosomal protein L18a yes no 3 0.00013267 40.857 1 0.66651 0.82372 NaN 1 Median 0.66651 0.82372 NaN 1 0 Median NaN NaN NaN 0 0 Median 8460000 5303700 3156300 8460000 5303700 3156300 0 0 0 1476 397 1596 2393 3899;3900;3901 3900 3 KTCTTVAFTQVNSEDK CIIKGKARLGRLVHRKTCTTVAFTQVNSED TCTTVAFTQVNSEDKGALAKLVEAIRTNYN R K T D K G 1 0 1 1 1 1 1 0 0 0 0 2 0 1 0 1 4 0 0 2 0 0 16 1 1827.8673 P62424;Q9BY74;Q5T8U2 P62424 197 212 RPL7A;RP-L7a 60S ribosomal protein L7a yes no 3 9.6224E-08 86.548 1 0.78074 0.95994 NaN 1 Median 0.78074 0.95994 NaN 1 0 Median NaN NaN NaN 0 0 Median 19976000 11342000 8634500 19976000 11342000 8634500 0 0 0 1477 789 1597 2394 3902;3903 3902 2 KTDAPQPDVKEEEEEKEEEK FCCSGKKQTSGMEYKKTDAPQPDVKEEEEE QPDVKEEEEEKEEEKDKGDEEEEGEEKLEE K K T E K D 1 0 0 2 0 1 8 0 0 0 0 4 0 0 2 0 1 0 0 1 0 0 20 3 2386.1024 P27824 P27824 516 535 CANX Calnexin yes yes 4 0.022026 7.8971 1 0.44424 0.62066 NaN 1 Median 0.44424 0.62066 NaN 1 0 Median NaN NaN NaN 0 0 Median 6707800 3689300 3018500 6707800 3689300 3018500 0 0 0 1478 750 1598 2395 3904 3904 1 KTEELEEESFPER WEGLVYAPPGKEKQRKTEELEEESFPERSK QRKTEELEEESFPERSKKEDRGKRSEGGHR R K T E R S 0 1 0 0 0 0 6 0 0 0 1 1 0 1 1 1 1 0 0 0 0 0 13 1 1621.7471 Q9Y2W1 Q9Y2W1 486 498 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3 0.0027957 33.008 1 0.62445 0.77585 NaN 1 Median NaN NaN NaN 0 0 Median 0.62445 0.77585 NaN 1 0 Median 4391900 2447800 1944100 0 0 0 4391900 2447800 1944100 1479 963 1599 2396 3905;3906 3906 2 KTPEGDASPSTPEENETTTTSAFTIQEYFAK SKTDLDCIFGKRQSKKTPEGDASPSTPEEN TTTTSAFTIQEYFAKRMAA___________ K K T A K R 3 0 1 1 0 1 5 1 0 1 0 2 0 2 3 3 7 0 1 0 0 0 31 1 3376.5471 E5RGR1;Q96BK5 E5RGR1 164 194 PINX1 PIN2/TERF1-interacting telomerase inhibitor 1 yes no 3 5.5713E-22 54.683 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1480 602 1600 2397 3907;3908 3907 900;1912;1913;1914;1915;1916 0 KTPESKPTILVK TNMGWADAMAKVLNKKTPESKPTILVKNKK LNKKTPESKPTILVKNKKPKKKKKKKKKK_ K K T V K N 0 0 0 0 0 0 1 0 0 1 1 3 0 0 2 1 2 0 0 1 0 0 12 2 1339.8075 A0JLN3;Q9Y3B9;A8K201 A0JLN3 103 114 RRP15 RRP15-like protein yes no 3 0.0064528 45.438 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1481 292 1601 2398 3909 3909 1831 0 KTPLALAGSPTPK SAKGLGHPPSSPLLKKTPLALAGSPTPKNP LKKTPLALAGSPTPKNPEDKSPQLSLSPRP K K T P K N 2 0 0 0 0 0 0 1 0 0 2 2 0 0 3 1 2 0 0 0 0 0 13 1 1279.75 B9EGQ5;M0QXA7;O95785 B9EGQ5 169 181 WIZ Protein Wiz yes no 2;3 1.9624E-05 90.707 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1482 554 1602 2399;2400;2401 3910;3911;3912 3911 821 0 KTPPAPSPFDLPELK KILKEMCDVEQVLSKKTPPAPSPFDLPELK KTPPAPSPFDLPELKHVATEYQENKAPGKK K K T L K H 1 0 0 1 0 0 1 0 0 0 2 2 0 1 5 1 1 0 0 0 0 0 15 1 1635.8872 Q59HG1;O95239;B3KNC0 Q59HG1 1183 1197 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A yes no 2;3 4.3978E-05 62.658 2 2 0.45499 0.54393 NaN 1 Median NaN NaN NaN 0 0 Median 0.45499 0.54393 NaN 1 0 Median 2659000 1709600 949310 0 0 0 2659000 1709600 949310 1483 717 1603;1604;1605 2402;2403;2404;2405 3913;3914;3915;3916;3917;3918;3919 3917 1086;1950 1 KTPSKPPAQLSPSVPK SPKGKRKLDLNQEEKKTPSKPPAQLSPSVP TPSKPPAQLSPSVPKRPKLPAPTRTPATAP K K T P K R 1 0 0 0 0 1 0 0 0 0 1 3 0 0 5 3 1 0 0 1 0 0 16 2 1660.9512 F5H8D7;B4DTD3;B2RCY5;A0A024R0S8;Q59HH7;P18887;M0QYS5;B4DEB2 F5H8D7 225 240 XRCC1 DNA repair protein XRCC1 yes no 3 0.00020932 45.88 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1484 21 1606 2406 3920 3920 18 0 KTPTVIHK SAKDFIDLTLSKTQRKTPTVIHKHYQIHRI TLSKTQRKTPTVIHKHYQIHRIRHFYMRKV R K T H K H 0 0 0 0 0 0 0 0 1 1 0 2 0 0 1 0 2 0 0 1 0 0 8 1 922.56 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;O60747 Q8N4P8 27 34 GTPBP4 Nucleolar GTP-binding protein 1 yes no 2 0.006619 69.905 1 0.3573 0.443 NaN 1 Median NaN NaN NaN 0 0 Median 0.3573 0.443 NaN 1 0 Median 18937000 14434000 4502800 0 0 0 18937000 14434000 4502800 1485 585 1607 2407 3921;3922 3921 2 KTQMAEVLPSPR EQVGLPGKGGKAKGKKTQMAEVLPSPRGQR KGKKTQMAEVLPSPRGQRVIPRITIEMKAE K K T P R G 1 1 0 0 0 1 1 0 0 0 1 1 1 0 2 1 1 0 0 1 0 0 12 1 1355.7231 P11388 P11388 1204 1215 TOP2A DNA topoisomerase 2-alpha yes yes 2;3 5.2196E-52 136.81 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1486 734 1608;1609 2408;2409;2410;2411 3923;3924;3925;3926;3927;3928;3929 3926 163 1143 0 KTSPASLDFPESQK PSGSPDLWKLSPDQRKTSPASLDFPESQKS RKTSPASLDFPESQKSSRGGSPDLWKSSFF R K T Q K S 1 0 0 1 0 1 1 0 0 0 1 2 0 1 2 3 1 0 0 0 0 0 14 1 1533.7675 Q96JM3 Q96JM3 457 470 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 1.8108E-43 135.55 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1487 906 1610;1611 2412;2413;2414 3930;3931;3932;3933 3932 1553;1554;2029 0 KTSSDDESEEDEDDLLQR HAMGGVPAWAETTKRKTSSDDESEEDEDDL SDDESEEDEDDLLQRTGNFISTSTSLPRGI R K T Q R T 0 1 0 5 0 1 4 0 0 0 2 1 0 0 0 3 1 0 0 0 0 0 18 1 2109.8822 Q9Y5J1;B2RAX6 Q9Y5J1 203 220 UTP18 U3 small nucleolar RNA-associated protein 18 homolog yes no 2 6.1781E-17 67.928 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1488 968 1612;1613 2415;2416 3934;3935 3934 1754;1755;1756;2060 0 KTTHFVEGGDAGNREDQINR LWPFKLSSPRGGMKKKTTHFVEGGDAGNRE VEGGDAGNREDQINRLIRRMN_________ K K T N R L 1 2 2 2 0 1 2 3 1 1 0 1 0 1 0 0 2 0 0 1 0 0 20 2 2243.0679 A8MUD9;A0A024R814;P18124;O95036 A8MUD9 183 202 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 yes no 4 4.7913E-06 38.888 2 0.6967 0.86484 1.515 2 Median 0.6967 0.86484 1.515 2 0 Median NaN NaN NaN 0 0 Median 48149000 27234000 20915000 48149000 27234000 20915000 0 0 0 1489 99 1614 2417;2418 3936;3937;3938;3939;3940 3940 5 KTTPILR EEDLSAEMTEDETPKKTTPILRASARRHRS MTEDETPKKTTPILRASARRHRS_______ K K T L R A 0 1 0 0 0 0 0 0 0 1 1 1 0 0 1 0 2 0 0 0 0 0 7 1 827.52289 Q15021;B4E0B7;B3KY03;B3KMS0 Q15021 1387 1393 NCAPD2 Condensin complex subunit 1 yes no 2 0.024823 45.368 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1490 820 1615 2419 3941 3941 1998 0 KVEEAEPEEFVVEK TTLQKMGKKQNGKSKKVEEAEPEEFVVEKV KKVEEAEPEEFVVEKVLDRRVVNGKVEYFL K K V E K V 1 0 0 0 0 0 6 0 0 0 0 2 0 1 1 0 0 0 0 3 0 0 14 1 1660.8196 A4D177;Q13185;C9JMM0;B8ZZ43;S4R2Y4 A4D177 21 34 CBX3 Chromobox protein homolog 3 yes no 2;3 1.8451E-31 126.09 1 2 0.55149 0.65834 32.814 3 Median 0.33296 0.40373 NaN 1 0 Median 0.58596 0.70417 9.5173 2 0 Median 138610000 87113000 51502000 6053400 4627000 1426400 132560000 82486000 50075000 1491 309 1616 2420;2421;2422 3942;3943;3944;3945;3946 3943 5 KVEELEGEITTLNHK ALMASLDAEKAQGQKKVEELEGEITTLNHK KVEELEGEITTLNHKLQDASAEVERLRREN K K V H K L 0 0 1 0 0 0 4 1 1 1 2 2 0 0 0 0 2 0 0 1 0 0 15 1 1738.9101 A0A024R7H5;B4E0Z6;Q10589 A0A024R7H5 112 126 BST2 Bone marrow stromal antigen 2 yes no 3 0.00018794 51.073 1 1.9666 2.4465 NaN 1 Median NaN NaN NaN 0 0 Median 1.9666 2.4465 NaN 1 0 Median 11483000 2843100 8640400 0 0 0 11483000 2843100 8640400 1492 92 1617 2423 3947 3947 1 KVEETQDEDDDELIFVGEISSSK LFMECEEEELEPWQKKVEETQDEDDDELIF DDDELIFVGEISSSKPAISNILNRGHSSSS K K V S K P 0 0 0 4 0 1 5 1 0 2 1 2 0 1 0 3 1 0 0 2 0 0 23 1 2611.2025 Q8ND82;Q9UJJ2 Q8ND82 33 55 ZNF280C Zinc finger protein 280C yes no 3 5.3029E-05 31.976 1 0.87593 1.0669 NaN 1 Median 0.87593 1.0669 NaN 1 0 Median NaN NaN NaN 0 0 Median 6615900 3341400 3274500 6615900 3341400 3274500 0 0 0 1493 887 1618 2424 3948;3949;3950 3949 3 KVEEVLEEEEEEYVVEK ______________________________ EEVLEEEEEEYVVEKVLDRRVVKGKVEYLL K K V E K V 0 0 0 0 0 0 9 0 0 0 1 2 0 0 0 0 0 0 1 4 0 0 17 1 2108.0049 C9JWS9;K7ELA4;B5MD17;J3KS05;Q6IBN6;P83916 C9JWS9 9 25 CBX1 Chromobox protein homolog 1 yes no 2;3 1.9808E-09 80.316 2 3 0.69428 0.82577 31.487 5 Median 1.122 1.3724 4.6012 2 0 Median 0.63829 0.77991 6.1295 3 0 Median 204410000 111930000 92478000 71606000 34355000 37251000 132800000 77578000 55227000 1494 533 1619 2425;2426;2427;2428;2429 3951;3952;3953;3954;3955;3956;3957;3958;3959;3960;3961;3962;3963;3964 3964 13 KVEFLK MVFCDDKIIFMASKKKVEFLKQIANTKGNE KIIFMASKKKVEFLKQIANTKGNENANGAP K K V L K Q 0 0 0 0 0 0 1 0 0 0 1 2 0 1 0 0 0 0 0 1 0 0 6 1 762.46398 Q9Y5B9;Q0VGA3 Q9Y5B9 81 86 SUPT16H FACT complex subunit SPT16 yes no 2 0.012966 85.265 1 0.57201 0.69917 NaN 1 Median NaN NaN NaN 0 0 Median 0.57201 0.69917 NaN 1 0 Median 27847000 16852000 10996000 0 0 0 27847000 16852000 10996000 1495 967 1620 2430 3965 3965 1 KVESLQEEIAFLK QDVDNASLARLDLERKVESLQEEIAFLKKL ERKVESLQEEIAFLKKLHEEEIQELQAQIQ R K V L K K 1 0 0 0 0 1 3 0 0 1 2 2 0 1 0 1 0 0 0 1 0 0 13 1 1532.845 V9HWE1;P08670;B0YJC4;B3KRK8;B0YJC5;Q5JVS8 V9HWE1 223 235 HEL113;VIM Vimentin yes no 2 0.00047705 85.554 2 1.175 1.4434 NaN 1 Median NaN NaN NaN 0 0 Median 1.175 1.4434 NaN 1 0 Median 23196000 10087000 13109000 0 0 0 23196000 10087000 13109000 1496 731 1621 2431;2432 3966;3967;3968 3967 3 KVGDDIAK SALAPKIGPLGLSPKKVGDDIAKATGDWKG PLGLSPKKVGDDIAKATGDWKGLRITVKLT K K V A K A 1 0 0 2 0 0 0 1 0 1 0 2 0 0 0 0 0 0 0 1 0 0 8 1 844.46543 D3DS95;Q76P68;Q59FI9;P30050 D3DS95 41 48 hCG_21173;cICK0721Q.2;RPL12 60S ribosomal protein L12 yes no 2 0.029671 46.426 1 0.50578 0.61657 NaN 1 Median NaN NaN NaN 0 0 Median 0.50578 0.61657 NaN 1 0 Median 8014000 5069400 2944600 0 0 0 8014000 5069400 2944600 1497 590 1622 2433 3969 3969 1 KVPEPDNKK EDGKLKKPKNKDKDKKVPEPDNKKKKPKKE NKDKDKKVPEPDNKKKKPKKEEEQKWKWWE K K V K K K 0 0 1 1 0 0 1 0 0 0 0 3 0 0 2 0 0 0 0 1 0 0 9 2 1053.5819 P11387;B9EG90 P11387 184 192 TOP1 DNA topoisomerase 1 yes no 3 0.029652 24.882 1 0.75873 1.0957 NaN 1 Median NaN NaN NaN 0 0 Median 0.75873 1.0957 NaN 1 0 Median 47547000 25840000 21707000 0 0 0 47547000 25840000 21707000 1498 733 1623 2434 3970 3970 1 KVQSDGQIVLVDDWIK MTLVTPLQLLLFASKKVQSDGQIVLVDDWI VQSDGQIVLVDDWIKLQISHEAAACITGLR K K V I K L 0 0 0 3 0 2 0 1 0 2 1 2 0 0 0 1 0 1 0 3 0 0 16 1 1841.9887 Q08211;B3KU66 Q08211 1074 1089 DHX9 ATP-dependent RNA helicase A yes no 3 0.0032761 24.893 1 0.46474 0.55514 NaN 1 Median NaN NaN NaN 0 0 Median 0.46474 0.55514 NaN 1 0 Median 5266800 3365800 1901100 0 0 0 5266800 3365800 1901100 1499 802 1624 2435 3971 3971 1 KVSGTLDTPEK RQTSTKGQVLRKKKKKVSGTLDTPEKTVDS KKKKKVSGTLDTPEKTVDSQGPTPVCTPTF K K V E K T 0 0 0 1 0 0 1 1 0 0 1 2 0 0 1 1 2 0 0 1 0 0 11 1 1173.6241 Q9BYG3;H7BZL0;C9J808 Q9BYG3 216 226 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein yes no 2 0.010487 56.043 1 0.88391 1.0943 NaN 1 Median NaN NaN NaN 0 0 Median 0.88391 1.0943 NaN 1 0 Median 10522000 5775100 4746700 0 0 0 10522000 5775100 4746700 1500 922 1625 2436 3972;3973 3973 2 KVTFGLNR PGPAVQLNKTPSSSKKVTFGLNRNMTAEFK KTPSSSKKVTFGLNRNMTAEFKKTDKSILV K K V N R N 0 1 1 0 0 0 0 1 0 0 1 1 0 1 0 0 1 0 0 1 0 0 8 1 933.5396 Q14684 Q14684 683 690 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 2 0.02257 51.787 1 0.84597 1.0992 NaN 1 Median NaN NaN NaN 0 0 Median 0.84597 1.0992 NaN 1 0 Median 6736500 3955400 2781100 0 0 0 6736500 3955400 2781100 1501 815 1626 2437 3974 3974 1 KVVEAVNSDSDSEFGIPK SSDTVPKPKRAPKQKKVVEAVNSDSDSEFG EAVNSDSDSEFGIPKKTTTPKGKGRGAKKR K K V P K K 1 0 1 2 0 0 2 1 0 1 0 2 0 1 1 3 0 0 0 3 0 0 18 1 1919.9476 Q02880;Q71UH4;Q59H80;B4DLV2;Q8WTY5 Q02880 1515 1532 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 2;3 3.9946E-32 120.11 3 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1502 796 1627;1628 2438;2439;2440;2441 3975;3976;3977;3978;3979;3980;3981;3982 3978 1274;1275 0 KVVEAVNSDSDSEFGIPKK SSDTVPKPKRAPKQKKVVEAVNSDSDSEFG AVNSDSDSEFGIPKKTTTPKGKGRGAKKRK K K V K K T 1 0 1 2 0 0 2 1 0 1 0 3 0 1 1 3 0 0 0 3 0 0 19 2 2048.0426 Q02880;Q71UH4;Q59H80;B4DLV2;Q8WTY5 Q02880 1515 1533 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 3 2.3244E-19 105.82 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1503 796 1629 2442 3983;3984;3985 3984 1274;1275 0 KVVNPLFEK KVAPAPAVVKKQEAKKVVNPLFEKRPKNFG KKQEAKKVVNPLFEKRPKNFGIGQDIQPKR K K V E K R 0 0 1 0 0 0 1 0 0 0 1 2 0 1 1 0 0 0 0 2 0 0 9 1 1072.6281 P62424;Q5T8U3 P62424 26 34 RPL7A 60S ribosomal protein L7a yes no 2 0.001034 74.173 1 0.49081 0.61082 NaN 1 Median NaN NaN NaN 0 0 Median 0.49081 0.61082 NaN 1 0 Median 11625000 7148100 4477100 0 0 0 11625000 7148100 4477100 1504 789 1630 2443 3986 3986 1 KVYENYPTYDLTER ASANLEEVTMKQICKKVYENYPTYDLTERK KKVYENYPTYDLTERKDFIKTTVKELIS__ K K V E R K 0 1 1 1 0 0 2 0 0 0 1 1 0 0 1 0 2 0 3 1 0 0 14 1 1789.8523 P35659;B4DFG0;B4DNW3;H0Y993;Q6MZJ9 P35659 349 362 DEK;DKFZp686A24118 Protein DEK yes no 3 0.0007965 40.801 1 0.48279 0.69952 NaN 1 Median NaN NaN NaN 0 0 Median 0.48279 0.69952 NaN 1 0 Median 18400000 12519000 5881200 0 0 0 18400000 12519000 5881200 1505 754 1631 2444 3987;3988;3989 3988 3 KWGVPIEK KLNYLDPRITVAWCKKWGVPIEKIYNKTQR ITVAWCKKWGVPIEKIYNKTQREKFAWAID K K W E K I 0 0 0 0 0 0 1 1 0 1 0 2 0 0 1 0 0 1 0 1 0 0 8 1 955.5491 P11387;B9EG90;Q9BVT2 P11387 735 742 TOP1 DNA topoisomerase 1 yes no 2 0.010072 62.107 1 0.75448 0.90438 NaN 1 Median NaN NaN NaN 0 0 Median 0.75448 0.90438 NaN 1 0 Median 71303000 39485000 31818000 0 0 0 71303000 39485000 31818000 1506 733 1632 2445 3990 3990 1 KYDAFLASESLIK KKLNKNKKLVKKLAKKYDAFLASESLIKQI AKKYDAFLASESLIKQIPRILGPGLNKAGK K K Y I K Q 2 0 0 1 0 0 1 0 0 1 2 2 0 1 0 2 0 0 1 0 0 0 13 1 1483.7922 Q1JQ76;P62906;A0A024RCW3 Q1JQ76 95 107 RPL10A Ribosomal protein;60S ribosomal protein L10a yes no 2 0.019229 38.021 1 0.59102 0.70799 NaN 1 Median NaN NaN NaN 0 0 Median 0.59102 0.70799 NaN 1 0 Median 3193600 1959700 1233900 0 0 0 3193600 1959700 1233900 1507 790 1633 2446 3991 3991 1 KYEDEINKR SELNNMQDLVEDYKKKYEDEINKRTAAEND VEDYKKKYEDEINKRTAAENDFVTLKKDVD K K Y K R T 0 1 1 1 0 0 2 0 0 1 0 2 0 0 0 0 0 0 1 0 0 0 9 2 1193.6041 CON__P35908;P35908 CON__P35908 273 281 KRT2 Keratin, type II cytoskeletal 2 epidermal no no 3 0.0038074 63.216 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 + 1508 583 1634 2447 3992 3992 1 KYELGRPAANTK RRKTGGKRKPYHKKRKYELGRPAANTKIGP KKRKYELGRPAANTKIGPRRIHTVRVRGGC R K Y T K I 2 1 1 0 0 0 1 1 0 0 1 2 0 0 1 0 1 0 1 0 0 0 12 2 1346.7306 Q5JR95;Q5JR94;P62241 Q5JR95 26 37 RPS8 40S ribosomal protein S8 yes no 3 0.0082508 33.227 1 0.82699 0.98703 NaN 1 Median 0.82699 0.98703 NaN 1 0 Median NaN NaN NaN 0 0 Median 28082000 14063000 14019000 28082000 14063000 14019000 0 0 0 1509 785 1635 2448 3993;3994 3993 2 KYPLTVFESR VVTQCGKFYHEACVKKYPLTVFESRGFRCP EACVKKYPLTVFESRGFRCPLHSCVSCHAS K K Y S R G 0 1 0 0 0 0 1 0 0 0 1 1 0 1 1 1 1 0 1 1 0 0 10 1 1238.6659 O96028 O96028 746 755 WHSC1 Histone-lysine N-methyltransferase NSD2 yes yes 2 0.0020777 61.435 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1510 724 1636 2449 3995;3996;3997 3995 1109 0 KYQEQLVQEQELAK AVDKQLASELEYDMKKYQEQLVQEQELAKH KKYQEQLVQEQELAKHADVAGTAGGAEVAP K K Y A K H 1 0 0 0 0 4 3 0 0 0 2 2 0 0 0 0 0 0 1 1 0 0 14 1 1732.8996 P42695;Q96FA6;E9PQA3 P42695 1258 1271 NCAPD3 Condensin-2 complex subunit D3 yes no 3 0.0025098 30.894 1 0.23936 0.2861 NaN 1 Median NaN NaN NaN 0 0 Median 0.23936 0.2861 NaN 1 0 Median 4112200 3079900 1032300 0 0 0 4112200 3079900 1032300 1511 759 1637 2450 3998;3999 3998 2 KYVISDEEEEDDD KRKAEDDDKANKKHKKYVISDEEEEDDD__ HKKYVISDEEEEDDD_______________ K K Y D D - 0 0 0 4 0 0 4 0 0 1 0 1 0 0 0 1 0 0 1 1 0 0 13 1 1584.6315 B4DNM0;Q8WVC0 B4DNM0 632 644 LEO1 RNA polymerase-associated protein LEO1 yes no 2 8.7456E-55 139.3 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1512 487 1638 2451;2452 4000;4001;4002;4003;4004;4005;4006 4001 711 0 KYVIYIER YKGQQIGKVVQVYRKKYVIYIERVQREKAN VVQVYRKKYVIYIERVQREKANGTTVHVGI K K Y E R V 0 1 0 0 0 0 1 0 0 2 0 1 0 0 0 0 0 0 2 1 0 0 8 1 1082.6124 Q6IBH6;P61254;J3KTJ8;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;J3KS10;Q9UNX3;E5RIT6 Q6IBH6 77 84 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 no no 2 0.0065287 71.501 1 1 0.49342 0.69476 55.304 2 Median 0.79423 1.0272 NaN 1 0 Median 0.30654 0.4699 NaN 1 0 Median 43816000 29968000 13848000 12157000 6318400 5838800 31659000 23650000 8008700 1513 782;959 1639 2453;2454 4007;4008 4007 2 KYVSQYYPK TRLCEPKEASYSLIRKYVSQYYPKLRVDIR SYSLIRKYVSQYYPKLRVDIRPQLLKNALQ R K Y P K L 0 0 0 0 0 1 0 0 0 0 0 2 0 0 1 1 0 0 3 1 0 0 9 1 1174.6023 Q5SSJ5;X6RGJ2;B0QZK4;Q5SWC8 Q5SSJ5 283 291 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 2 0.0013122 83.998 1 0.3915 0.47807 NaN 1 Median NaN NaN NaN 0 0 Median 0.3915 0.47807 NaN 1 0 Median 28857000 19109000 9747900 0 0 0 28857000 19109000 9747900 1514 842 1640 2455 4009;4010 4009 2 LAAAEETAVSPR LTLGLAKRVWSLERRLAAAEETAVSPRKSP ERRLAAAEETAVSPRKSPRPAGPQLFLPDP R L A P R K 4 1 0 0 0 0 2 0 0 0 1 0 0 0 1 1 1 0 0 1 0 0 12 0 1213.6303 Q9BUH6 Q9BUH6 139 150 C9orf142 Protein PAXX yes yes 2 9.2068E-05 90.689 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1515 918 1641 2456 4011 4011 1590 0 LAAQSLDTSGLR RMAAESRRVLLLAGRLAAQSLDTSGLRHVQ AGRLAAQSLDTSGLRHVQLAFFPPGTVHPL R L A L R H 2 1 0 1 0 1 0 1 0 0 3 0 0 0 0 2 1 0 0 0 0 0 12 0 1230.6568 P07199 P07199 299 310 CENPB Major centromere autoantigen B yes yes 2 2.8751E-20 119.39 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1516 728 1642 2457;2458 4012;4013;4014;4015 4014 1122;1958 0 LAEDEGDSEPEAVGQSR GHPYVRRKRKKFPDRLAEDEGDSEPEAVGQ EDEGDSEPEAVGQSRGRRQKK_________ R L A S R G 2 1 0 2 0 1 4 2 0 0 1 0 0 0 1 2 0 0 0 1 0 0 17 0 1787.781 Q9UIG0 Q9UIG0 1461 1477 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 2 6.7835E-228 199.05 1 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1517 952 1643 2459;2460;2461 4016;4017;4018;4019 4017 1703 0 LAELSDYRR KKAVAMSKRYGSDRRLAELSDYRRLSESQL YGSDRRLAELSDYRRLSESQLSFRRSPTKS R L A R R L 1 2 0 1 0 0 1 0 0 0 2 0 0 0 0 1 0 0 1 0 0 0 9 1 1121.5829 A0A0S2Z4Z0;Q96PK6;B4DNG4 A0A0S2Z4Z0 608 616 RBM14 RNA-binding protein 14 yes no 3 0.011822 28.013 1 1.0098 1.4023 NaN 1 Median NaN NaN NaN 0 0 Median 1.0098 1.4023 NaN 1 0 Median 6482300 2727700 3754600 0 0 0 6482300 2727700 3754600 1518 267 1644 2462 4020 4020 1 LAHYNK FVNDIFERIAGEASRLAHYNKRSTITSREI ERIAGEASRLAHYNKRSTITSREIQTAVRL R L A N K R 1 0 1 0 0 0 0 0 1 0 1 1 0 0 0 0 0 0 1 0 0 0 6 0 744.39187 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257;Q6DRA6;Q6DN03 A0A024RCJ2 81 86 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C no no 2 1.0707E-16 116.49 2 0.60791 0.76468 NaN 1 Median NaN NaN NaN 0 0 Median 0.60791 0.76468 NaN 1 0 Median 555260000 350640000 204610000 0 0 0 555260000 350640000 204610000 1519 10;158 1645 2463;2464 4021;4022;4023 4022 3 LAHYNKR FVNDIFERIAGEASRLAHYNKRSTITSREI RIAGEASRLAHYNKRSTITSREIQTAVRLL R L A K R S 1 1 1 0 0 0 0 0 1 0 1 1 0 0 0 0 0 0 1 0 0 0 7 1 900.49298 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257;Q6DRA6;Q6DN03 A0A024RCJ2 81 87 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C no no 3 0.004391 52.683 1 3 0.18903 0.29735 65.721 3 Median 0.68365 0.88484 NaN 1 0 Median 0.18254 0.28423 6.3817 2 0 Median 149430000 119260000 30171000 12565000 7677900 4886800 136870000 111580000 25284000 1520 10;158 1646 2465;2466;2467;2468 4024;4025;4026;4027;4028;4029;4030 4029 7 LAIQGPEDSPSR ESSGAGGRRAEGPPRLAIQGPEDSPSRQSR PPRLAIQGPEDSPSRQSRRYDW________ R L A S R Q 1 1 0 1 0 1 1 1 0 1 1 0 0 0 2 2 0 0 0 0 0 0 12 0 1268.6361 Q5U0N1;A8K1F4;Q15773 Q5U0N1 230 241 MLF2 Myeloid leukemia factor 2 yes no 2 1.737E-32 110.14 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1521 339 1647 2469;2470 4031;4032;4033;4034 4031 514 0 LALDLEIATYR LARLLRDYQELMNTKLALDLEIATYRTLLE MNTKLALDLEIATYRTLLEGEESRMSGECA K L A Y R T 2 1 0 1 0 0 1 0 0 1 3 0 0 0 0 0 1 0 1 0 0 0 11 0 1276.7027 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;H6VRG2;H6VRF9;CON__P04264 H6VRG3 473 483 KRT1 Keratin, type II cytoskeletal 1 yes no 2 0.007576 59.426 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 7644500 7644500 0 0 0 0 7644500 7644500 0 + 1522 670 1648 2471 4035 4035 1 LALSPLSLGK TTMATRTSPRLAAQKLALSPLSLGKENLAE LAAQKLALSPLSLGKENLAESSKPTAGGSR K L A G K E 1 0 0 0 0 0 0 1 0 0 4 1 0 0 1 2 0 0 0 0 0 0 10 0 997.61718 P49454 P49454 3116 3125 CENPF Centromere protein F yes yes 2 0.0074085 43.604 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1523 768 1649 2472 4036 4036 1238 0 LAPDYDALDVANK NTLIRPDGEKKAYVRLAPDYDALDVANKIG VRLAPDYDALDVANKIGII___________ R L A N K I 3 0 1 3 0 0 0 0 0 0 2 1 0 0 1 0 0 0 1 1 0 0 13 0 1403.6933 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7;B9EJE3 H7BY10 142 154 RPL23A;RPL23AL 60S ribosomal protein L23a yes no 2 0.0091557 48.004 1 0.2225 0.28038 NaN 1 Median NaN NaN NaN 0 0 Median 0.2225 0.28038 NaN 1 0 Median 139160000 110340000 28822000 0 0 0 139160000 110340000 28822000 1524 385 1650 2473 4037;4038 4038 2 LAPGGHVGR PGITLLNVSKLNILKLAPGGHVGRFCIWTE KLNILKLAPGGHVGRFCIWTESAFRKLDEL K L A G R F 1 1 0 0 0 0 0 3 1 0 1 0 0 0 1 0 0 0 0 1 0 0 9 0 862.47733 Q59GY2;P36578;H3BM89;B4DMJ6;B4DMJ2;Q53G74 Q59GY2 254 262 RPL4 60S ribosomal protein L4 yes no 2 0.015392 48.561 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 5254100 5254100 0 0 0 0 5254100 5254100 0 1525 755 1651 2474 4039 4039 1 LAPSPDLQQMRK L A R K 1 1 0 1 0 2 0 0 0 0 2 1 1 0 2 1 0 0 0 0 0 0 12 1 1382.734 REV__Q5JW54 yes no 2 0.029855 43.084 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 + 1526 977 1652 2475 4040;4041 4040 234 1766 0 LAPVPSPEPQKPAPVSPESVK SPEPPKSVPVCESQKLAPVPSPEPQKPAPV PEPQKPAPVSPESVKATLSNPKPQKQSHFP K L A V K A 2 0 0 0 0 1 2 0 0 0 1 2 0 0 7 3 0 0 0 3 0 0 21 1 2153.1732 Q96JM3 Q96JM3 199 219 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2;3 2.5214E-17 86.625 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1527 906 1653 2476;2477 4042;4043 4043 1555;1556 0 LAQFIGNRR PELVKIINDNATYCRLAQFIGNRRELNEDK NATYCRLAQFIGNRRELNEDKLEKLEELTM R L A R R E 1 2 1 0 0 1 0 1 0 1 1 0 0 1 0 0 0 0 0 0 0 0 9 1 1073.6094 A8K9K6;O00567;A0PJ92;Q5JXT2 A8K9K6 213 221 NOP56 Nucleolar protein 56 yes no 3 0.0039194 33.263 1 0.43068 0.59173 NaN 1 Median NaN NaN NaN 0 0 Median 0.43068 0.59173 NaN 1 0 Median 5968000 3657900 2310100 0 0 0 5968000 3657900 2310100 1528 379 1654 2478 4044 4044 1 LAQQVCHAIANISDR LVSIGLDEKFPQDYRLAQQVCHAIANISDR LAQQVCHAIANISDRRKPSLGKRHPPFRLP R L A D R R 3 1 1 1 1 2 0 0 1 2 1 0 0 0 0 1 0 0 0 1 0 0 15 0 1694.8522 Q15021;B4E0B7;B3KY03;B3KMS0;E7EN77;Q6ZV00 Q15021 811 825 NCAPD2 Condensin complex subunit 1 yes no 3 4.4632E-07 68.283 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2711300 2711300 0 0 0 0 2711300 2711300 0 1529 820 1655 2479 4045 4045 1 LASLGDTASPLVK INSLLEYSRQPTGHKLASLGDTASPLVKSV HKLASLGDTASPLVKSVSCDGALSSCIESA K L A V K S 2 0 0 1 0 0 0 1 0 0 3 1 0 0 1 2 1 0 0 1 0 0 13 0 1270.7133 Q6P4F7 Q6P4F7 860 872 ARHGAP11A Rho GTPase-activating protein 11A yes yes 2 1.8803E-06 94.717 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1530 861 1656 2480 4046 4046 1429 0 LASPELER KNSDLLTSPDVGLLKLASPELERLIIQSSN PDVGLLKLASPELERLIIQSSNGHITTTPT K L A E R L 1 1 0 0 0 0 2 0 0 0 2 0 0 0 1 1 0 0 0 0 0 0 8 0 913.4869 P05412;Q6FHK0;P17535 P05412 71 78 JUN;JUND Transcription factor AP-1;Transcription factor jun-D yes no 2 3.7885E-05 96.015 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1531 727 1657 2481;2482 4047;4048;4049;4050;4051 4047 1121 0 LASTNSSVLGADLPSSMK EEEEAEAETAKATPRLASTNSSVLGADLPS TNSSVLGADLPSSMKEKAKAETEKAGKTGN R L A M K E 2 0 1 1 0 0 0 1 0 0 3 1 1 0 1 5 1 0 0 1 0 0 18 0 1776.8928 E7ETY2;J3KQ96;Q13428;H0YA99 E7ETY2 105 122 TCOF1 Treacle protein yes no 2 3.7621E-05 53.773 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1532 608 1658 2483 4052 4052 124 1921 0 LATVVGENGSVLR QLSSRRLRSKDSVEKLATVVGENGSVLRRV EKLATVVGENGSVLRRVTRAAAAAAAATMA K L A L R R 1 1 1 0 0 0 1 2 0 0 2 0 0 0 0 1 1 0 0 3 0 0 13 0 1313.7303 Q9NQS7;B3KPD3;E9PM67 Q9NQS7 110 122 INCENP Inner centromere protein yes no 2 2.2627E-42 133.93 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1533 932 1659 2484;2485 4053;4054;4055 4055 1638 0 LAVISDSGEK LTTRSPTVPSQNPSRLAVISDSGEKRVTIT QNPSRLAVISDSGEKRVTITEKSVASSESD R L A E K R 1 0 0 1 0 0 1 1 0 1 1 1 0 0 0 2 0 0 0 1 0 0 10 0 1017.5342 Q03164;B4E012 Q03164 2949 2958 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes no 2 1.3494E-77 129.84 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1534 798 1660 2486;2487;2488 4056;4057;4058;4059;4060;4061;4062 4059 1286 0 LAYIAHPK VKPKIPKGVSRKLDRLAYIAHPKLGKRARA VSRKLDRLAYIAHPKLGKRARARIAKGLRL R L A P K L 2 0 0 0 0 0 0 0 1 1 1 1 0 0 1 0 0 0 1 0 0 0 8 0 911.52289 A0A024R326;Q6IPI1;P47914 A0A024R326 96 103 RPL29 60S ribosomal protein L29 yes no 2 0.0064435 73.039 1 0.57083 0.71951 NaN 1 Median NaN NaN NaN 0 0 Median 0.57083 0.71951 NaN 1 0 Median 116440000 74320000 42119000 0 0 0 116440000 74320000 42119000 1535 52 1661 2489 4063;4064 4063 2 LCNLEEGSPGSGTYTR ______________________________ CNLEEGSPGSGTYTRHGYIFSSLAGCLMKS R L C T R H 0 1 1 0 1 0 2 3 0 0 2 0 0 0 1 2 2 0 1 0 0 0 16 0 1739.7785 R4GNH9;R4GMQ7;B1AMU7;B1AMU3;B1AMU4;Q9Y3B2 R4GNH9 14 29 EXOSC1 Exosome complex component CSL4 yes no 2 2.1619E-06 68.845 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1536 393 1662 2490;2491 4065;4066;4067 4067 591 0 LDADLLVPASVK NRGGRKPKRKMKTQKLDADLLVPASVKVLR TQKLDADLLVPASVKVLRRSNRKKIDDPID K L D V K V 2 0 0 2 0 0 0 0 0 0 3 1 0 0 1 1 0 0 0 2 0 0 12 0 1239.7075 Q8WWQ0;Q9NWP3 Q8WWQ0 1725 1736 PHIP PH-interacting protein yes no 2 0.00010542 72.891 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1537 894 1663 2492;2493 4068;4069;4070;4071 4070 1505 0 LDDANDAGGRNSTECTLILTEGDSAK KCSAVKHNRIKGIPKLDDANDAGGRNSTEC STECTLILTEGDSAKTLAVSGLGVVGRDKY K L D A K T 3 1 2 4 1 0 2 3 0 1 3 1 0 0 0 2 3 0 0 0 0 0 26 1 2722.2352 P11388 P11388 441 466 TOP2A DNA topoisomerase 2-alpha yes yes 3 2.7194E-08 42.454 1 0.936 1.1823 NaN 1 Median 0.936 1.1823 NaN 1 0 Median NaN NaN NaN 0 0 Median 3973500 1631700 2341800 3973500 1631700 2341800 0 0 0 1538 734 1664 2494 4072;4073 4072 2 LDDHALTGASDSR LDAHEDKVWGLHCSRLDDHALTGASDSRVI SRLDDHALTGASDSRVILWKDVTEAEQAEE R L D S R V 2 1 0 3 0 0 0 1 1 0 2 0 0 0 0 2 1 0 0 0 0 0 13 0 1356.627 A0JLS5;J3KNP2;Q12788 A0JLS5 378 390 TBL3 Transducin beta-like protein 3 yes no 3 0.0059003 31.345 1 1 0.79905 1.0304 20.67 2 Median 0.93299 1.1925 NaN 1 0 Median 0.68434 0.89025 NaN 1 0 Median 30125000 18065000 12060000 7030300 4025400 3005000 23095000 14039000 9055300 1539 295 1665 2495;2496 4074;4075 4075 2 LDGLVETPTGYIESLPR ______________________________ GLVETPTGYIESLPRVVKRRVNALKNLQVK R L D P R V 0 1 0 1 0 0 2 2 0 1 3 0 0 0 2 1 2 0 1 1 0 0 17 0 1858.9676 F8VRJ2;F8W118;F8VY35;F8VV59;A0A024RBE6;F5H4R6;H0YIV4;A0A024RBB7;P55209;B7Z5H0;H0YHC3;F8W020;F8VXI6;F8VUX1;B7Z9C2;F8W0J6;B7Z2V4 F8VRJ2 15 31 NAP1L1 Nucleosome assembly protein 1-like 1 yes no 2 1.0537E-05 64.565 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1540 139 1666 2497 4076;4077 4077 1802 0 LDHYAIIK RQPKYPRKSAPRRNKLDHYAIIKFPLTTES SAPRRNKLDHYAIIKFPLTTESAMKKIEDN K L D I K F 1 0 0 1 0 0 0 0 1 2 1 1 0 0 0 0 0 0 1 0 0 0 8 0 971.54402 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;Q53RC5 H7BY10 73 80 RPL23A;DKFZp547I014 60S ribosomal protein L23a yes no 2 1.5551E-49 157.21 1 3 0.4744 0.59777 39.6 3 Median 0.94936 1.1763 NaN 1 0 Median 0.47404 0.59255 1.2398 2 0 Median 167740000 109010000 58730000 13330000 5738100 7591800 154410000 103270000 51138000 1541 385 1667 2498;2499;2500;2501 4078;4079;4080;4081;4082;4083;4084 4080 7 LDIDSPPITAR LHAAMADTFLEHMCRLDIDSPPITARNTGI HMCRLDIDSPPITARNTGIICTI_______ R L D A R N 1 1 0 2 0 0 0 0 0 2 1 0 0 0 2 1 1 0 0 0 0 0 11 0 1196.6401 H3BN34;H3BQZ3;H3BU13;H3BT25;H3BUW1;H3BTJ2;H3BQ34;A0A024R609;B4DNK4;H3BTN5;B4DRT3;V9HWB8;A0A024R5Z9;P14618 H3BN34 33 43 PKM;PKM2;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM yes no 2 5.4341E-19 92.856 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1542 77 1668 2502;2503 4085;4086 4085 105 0 LDLAGR VPIYEGYALPHAILRLDLAGRDLTDYLMKI YALPHAILRLDLAGRDLTDYLMKILTERGY R L D G R D 1 1 0 1 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 6 0 643.36532 P63261;B4E3A4;Q8WVW5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4DVQ0;B4E335;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;I3L3I0;I3L1U9;B3KUD3;B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;V9HVZ7;I3L4N8;B4DUI8;B3KW67;A8K3K1;Q13707;Q6S8J3;A5A3E0;L0R5C4;Q562R1;P0CG39;P0CG38;Q9BYX7;K4EQ44;K4EP00;K4ENJ5;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L9;Q562L5;A0AUL6;Q562Z6;Q562Y8;Q562N2;Q562M5;Q562M3;Q562Z4;Q562V5;Q562U2;Q562N6;G8FSY7;Q562X7;Q562X4;Q562X2;Q562X1;Q562W9;Q562T6;Q562T5;Q562T4;Q562T3;Q562T0;Q562S2;Q562R6;Q562R4;Q562R0;Q562Q9;Q562Q8;Q562Q6;Q562Q5;Q562Q4;Q562Q3;Q562Q1;Q562Q0;Q562L3 P63261 178 183 ACTG1;PS1TP5BP1;ACTB;ACTA2;ACTG2;ACTA1;ACTC1;HEL-176;POTEE;POTEF;POTEM;ACTBL2;POTEJ;POTEI;POTEKP;ACT Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Beta-actin-like protein 2;POTE ankyrin domain family member J;POTE ankyrin domain family member I;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed yes no 2 0.027375 50.12 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 7433900 0 7433900 0 0 0 7433900 0 7433900 1543 794 1669 2504 4087 4087 1 LDLEDSYTLR GDSDLDLLGDCRNPRLDLEDSYTLRGSYTR CRNPRLDLEDSYTLRGSYTRKKDVPTDGYE R L D L R G 0 1 0 2 0 0 1 0 0 0 3 0 0 0 0 1 1 0 1 0 0 0 10 0 1223.6034 Q5VWN6;Q6IPC8 Q5VWN6 1843 1852 FAM208B;C10orf18 Protein FAM208B yes no 2 2.5204E-13 107.85 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1544 852 1670 2505;2506 4088;4089 4088 1406;2008 0 LDLLGNLPGSK EEKDINTFVGTPVEKLDLLGNLPGSKRRPQ PVEKLDLLGNLPGSKRRPQTPKEKAKALED K L D S K R 0 0 1 1 0 0 0 2 0 0 4 1 0 0 1 1 0 0 0 0 0 0 11 0 1125.6394 P46013 P46013 1928 1938 MKI67 Antigen KI-67 yes no 2 0.0032272 59.607 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1545 762 1671 2507;2508 4090;4091;4092 4091 1222 0 LDLTENLTGSK EEKDIIIFVGTPVQKLDLTENLTGSKRRPQ PVQKLDLTENLTGSKRRPQTPKEEAQALED K L D S K R 0 0 1 1 0 0 1 1 0 0 3 1 0 0 0 1 2 0 0 0 0 0 11 0 1189.619 P46013 P46013 1320 1330 MKI67 Antigen KI-67 yes no 2 0.0012115 68.893 2 0.66634 0.83717 NaN 1 Median NaN NaN NaN 0 0 Median 0.66634 0.83717 NaN 1 0 Median 49476000 28128000 21347000 0 0 0 49476000 28128000 21347000 1546 762 1672;1673 2509;2510 4093;4094 4093 1978 1 LDQPGNLPGSNRR EEKDINTFLGTPVQKLDQPGNLPGSNRRLQ QKLDQPGNLPGSNRRLQTRKEKAQALEELT K L D R R L 0 2 2 1 0 1 0 2 0 0 2 0 0 0 2 1 0 0 0 0 0 0 13 1 1422.7328 P46013 P46013 1806 1818 MKI67 Antigen KI-67 yes yes 3 0.00028215 61.11 1 1 0.96466 1.4229 15.664 2 Median 0.99675 1.2738 NaN 1 0 Median 0.93361 1.5896 NaN 1 0 Median 37773000 19611000 18162000 6238300 3270200 2968100 31534000 16341000 15193000 1547 762 1674 2511;2512 4095;4096;4097;4098 4095 4 LDSQPQETSPELPR RPATATNHVTEGIPRLDSQPQETSPELPRR RLDSQPQETSPELPRRRVRHQGDLSSGYLD R L D P R R 0 1 0 1 0 2 2 0 0 0 2 0 0 0 3 2 1 0 0 0 0 0 14 0 1595.7791 A0A024RBK4;O14545 A0A024RBK4 407 420 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes no 2 0.0011058 56.043 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1548 147 1675 2513;2514 4099;4100 4099 211 0 LDSSPSVSSTLAAK GLTPANSQASKATPKLDSSPSVSSTLAAKD KLDSSPSVSSTLAAKDDPDGKQEAKPQQAA K L D A K D 2 0 0 1 0 0 0 0 0 0 2 1 0 0 1 5 1 0 0 1 0 0 14 0 1361.7038 E7ETY2;J3KQ96;Q13428;B4DRA2 E7ETY2 1225 1238 TCOF1 Treacle protein yes no 2 2.4729E-43 135.58 1 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1549 608 1676;1677 2515;2516;2517;2518 4101;4102;4103;4104;4105;4106;4107;4108;4109;4110;4111;4112 4101 917;918 0 LDSSPSVSSTLAAKDDPDGK GLTPANSQASKATPKLDSSPSVSSTLAAKD SVSSTLAAKDDPDGKQEAKPQQAAGMLSPK K L D G K Q 2 0 0 4 0 0 0 1 0 0 2 2 0 0 2 5 1 0 0 1 0 0 20 1 1988.9538 E7ETY2;J3KQ96;Q13428;B4DRA2 E7ETY2 1225 1244 TCOF1 Treacle protein yes no 2;3 4.9691E-47 124.18 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1550 608 1678 2519;2520;2521;2522 4113;4114;4115;4116;4117 4113 917;918 0 LDVTILSPSR QEFTVDTRGAGGQGKLDVTILSPSRKVVPC GGQGKLDVTILSPSRKVVPCLVTPVTGREN K L D S R K 0 1 0 1 0 0 0 0 0 1 2 0 0 0 1 2 1 0 0 1 0 0 10 0 1099.6237 Q68CT4;E7EN95;A0A024R321;O75369 Q68CT4 808 817 DKFZp686A1668;FLNB Filamin-B yes no 2 1.3117E-10 86.772 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1551 51 1679 2523 4118;4119 4119 52 0 LDVTILSPSRK QEFTVDTRGAGGQGKLDVTILSPSRKVVPC GQGKLDVTILSPSRKVVPCLVTPVTGRENS K L D R K V 0 1 0 1 0 0 0 0 0 1 2 1 0 0 1 2 1 0 0 1 0 0 11 1 1227.7187 Q68CT4;E7EN95;A0A024R321;O75369 Q68CT4 808 818 DKFZp686A1668;FLNB Filamin-B yes no 2 0.00014713 89.403 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1552 51 1680 2524;2525 4120;4121;4122;4123;4124 4124 52 0 LEAIITPPPAK IHPELLAKKRGSKGKLEAIITPPPAKKAKS SKGKLEAIITPPPAKKAKSPSQKKPVSKKA K L E A K K 2 0 0 0 0 0 1 0 0 2 1 1 0 0 3 0 1 0 0 0 0 0 11 0 1148.6805 O75367;D6RCF2 O75367 124 134 H2AFY Core histone macro-H2A.1;Histone H2A yes no 2 8.8384E-20 119.39 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1553 709 1681 2526;2527 4125;4126;4127;4128;4129;4130;4131;4132;4133;4134 4128 1945 0 LEAIITPPPAKK IHPELLAKKRGSKGKLEAIITPPPAKKAKS KGKLEAIITPPPAKKAKSPSQKKPVSKKAG K L E K K A 2 0 0 0 0 0 1 0 0 2 1 2 0 0 3 0 1 0 0 0 0 0 12 1 1276.7755 O75367;D6RCF2 O75367 124 135 H2AFY Core histone macro-H2A.1;Histone H2A yes no 2 5.1166E-06 96.734 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1554 709 1682 2528;2529 4135;4136;4137;4138 4137 1945 0 LEAQDSGEEARNLSFNELYPSGTLK SPPDTQEIHVIEQEKLEAQDSGEEARNLSF RNLSFNELYPSGTLKLQYNFDTIDQQFCDL K L E L K L 2 1 2 1 0 1 4 2 0 0 4 1 0 1 1 3 1 0 1 0 0 0 25 1 2767.3301 Q8WYP5;B3KTD2;B3KVE5;B3KRD0 Q8WYP5 1528 1552 AHCTF1 Protein ELYS yes no 3 9.2747E-13 47.719 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1555 897 1683 2530 4139 4139 1523;1524;1525 0 LECVEPNCR IFRKKAKTTKKIVLRLECVEPNCRSKRMLA KKIVLRLECVEPNCRSKRMLAIKRCKHFEL R L E C R S 0 1 1 0 2 0 2 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 9 0 1175.5063 B2R4V2;Q969Q0;H0Y5B4;H7BZ11;J3KQN4;P83881 B2R4V2 70 78 RPL36AL;RPL36A;RPL36A-HNRNPH2 60S ribosomal protein L36a-like;60S ribosomal protein L36a no no 2 0.006677 60.91 1 0.46061 0.58899 NaN 1 Median NaN NaN NaN 0 0 Median 0.46061 0.58899 NaN 1 0 Median 17324000 12509000 4814500 0 0 0 17324000 12509000 4814500 1556 401;650 1684 2531 4140 4140 1 LEDNPSSGSPPR GSYEMTNQHVKQNGKLEDNPSSGSPPRTTL NGKLEDNPSSGSPPRTTLLGTIFSPVFNFF K L E P R T 0 1 1 1 0 0 1 1 0 0 1 0 0 0 3 3 0 0 0 0 0 0 12 0 1254.584 A0A024R5Q8;Q05D32;H0YMH7 A0A024R5Q8 126 137 CTDSPL2 CTD small phosphatase-like protein 2 yes no 2 1.6133E-05 91.812 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1557 72 1685 2532;2533 4141;4142;4143;4144 4142 97 0 LEEEARASAAEEK L E E K 4 1 0 0 0 0 5 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 13 1 1431.6842 REV__B4E245 yes no 3 0.0074515 36.284 1 0.79652 1.1137 NaN 1 Median NaN NaN NaN 0 0 Median 0.79652 1.1137 NaN 1 0 Median 14537000 7898700 6638000 0 0 0 14537000 7898700 6638000 + 1558 981 1686 2534 4145 4145 1 LEEFSPR GNQQSYPQEVHGSSRLEEFSPRQAQMFQNF QEVHGSSRLEEFSPRQAQMFQNFGGTGGSS R L E P R Q 0 1 0 0 0 0 2 0 0 0 1 0 0 1 1 1 0 0 0 0 0 0 7 0 876.43413 W5ZR30;Q9UGU0;I3L1M7 W5ZR30 27 33 TCF20 Transcription factor 20 yes no 2 1.2015E-25 123.86 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1559 949 1687 2535;2536 4146;4147;4148 4148 1688 0 LEGTEDLSDVLVR AFACLLHLANEKNLKLEGTEDLSDVLVRQG LKLEGTEDLSDVLVRQGD____________ K L E V R Q 0 1 0 2 0 0 2 1 0 0 3 0 0 0 0 1 1 0 0 2 0 0 13 0 1444.7409 B4DRG7;E9PHA2;A8K4T8;Q15003;H7C415 B4DRG7 702 714 NCAPH Condensin complex subunit 2 yes no 2 0.0047148 58.676 1 0.52785 0.70757 NaN 1 Median NaN NaN NaN 0 0 Median 0.52785 0.70757 NaN 1 0 Median 7808100 5257800 2550300 0 0 0 7808100 5257800 2550300 1560 354 1688 2537 4149 4149 1 LELQGPRGSPNAR LNSCNKREIEGRAIRLELQGPRGSPNARSQ IRLELQGPRGSPNARSQPSKTLFVKGLSED R L E A R S 1 2 1 0 0 1 1 2 0 0 2 0 0 0 2 1 0 0 0 0 0 0 13 1 1393.7426 H7BY16;Q9BQ02;B3KM80;Q6ZS99;A0A024R4A0;P19338 H7BY16 180 192 NCL Nucleolin yes no 2;3 4.5361E-55 139.66 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1561 61 1689 2538;2539;2540 4150;4151;4152;4153;4154;4155;4156;4157;4158;4159 4151 68 0 LELSSSASPQEER PPLERTEGQTPSSSRLELSSSASPQEERTV SRLELSSSASPQEERTVGVAFNQETGHWER R L E E R T 1 1 0 0 0 1 3 0 0 0 2 0 0 0 1 4 0 0 0 0 0 0 13 0 1431.6842 A0A075B6T1;B4DZ97;Q9C0C7 A0A075B6T1 542 554 AMBRA1 Activating molecule in BECN1-regulated autophagy protein 1 yes no 2 0.0026768 51.875 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1562 174 1690 2541 4160 4160 235 0 LEPASPPEDTSAEVSR ERIFTGNKFTKDTTKLEPASPPEDTSAEVS EPASPPEDTSAEVSRATVLDLAGNARSDKG K L E S R A 2 1 0 1 0 0 3 0 0 0 1 0 0 0 3 3 1 0 0 1 0 0 16 0 1683.7952 Q75MX6;E9PFE2;Q59FS0;Q9UHL9 Q75MX6 444 459 GTF2IRD1 General transcription factor II-I repeat domain-containing protein 1 yes no 2 7.8933E-07 78.95 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1563 616 1691 2542 4161;4162 4161 939 0 LEPTNVQTVTCSPR LSRALNKAKNSSDAKLEPTNVQTVTCSPRV KLEPTNVQTVTCSPRVKALPLSPRKRLGDD K L E P R V 0 1 1 0 1 1 1 0 0 0 1 0 0 0 2 1 3 0 0 2 0 0 14 0 1600.7879 B2R935;A0A024R1S2;Q99741;J3KTI7;J3QR52;J3QLN7 B2R935 34 47 CDC6 Cell division control protein 6 homolog yes no 2 1.0483E-42 133.25 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1564 36 1692 2543;2544 4163;4164;4165 4164 33;1778 0 LEQIDGHIAEHNSK NEHALQKDALSIKLKLEQIDGHIAEHNSKI KLEQIDGHIAEHNSKIKYWHKEISKISLHP K L E S K I 1 0 1 1 0 1 2 1 2 2 1 1 0 0 0 1 0 0 0 0 0 0 14 0 1589.7798 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 1018 1031 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 3 8.2496E-05 65.467 1 0.58383 0.72488 NaN 1 Median NaN NaN NaN 0 0 Median 0.58383 0.72488 NaN 1 0 Median 29142000 19536000 9606800 0 0 0 29142000 19536000 9606800 1565 941 1693 2545 4166;4167 4167 2 LETDSRPVSR AKFWKICPMEHILVRLETDSRPVSRRLVSL HILVRLETDSRPVSRRLVSLIFNSFLPVNQ R L E S R R 0 2 0 1 0 0 1 0 0 0 1 0 0 0 1 2 1 0 0 1 0 0 10 1 1158.5993 B3KRQ2;Q86XI2;B4DHE5;B4DXB7;Q9NXD3;H0Y6U5 B3KRQ2 507 516 NCAPG2 Condensin-2 complex subunit G2 yes no 3 0.00022829 60.518 1 0.53337 0.88606 NaN 1 Median NaN NaN NaN 0 0 Median 0.53337 0.88606 NaN 1 0 Median 19763000 13063000 6700700 0 0 0 19763000 13063000 6700700 1566 441 1694 2546 4168;4169 4168 2 LETSEFFELTSEEK AAFEDNEVQDEFLEKLETSEFFELTSEEKL KLETSEFFELTSEEKLQILTALCHRILMTY K L E E K L 0 0 0 0 0 0 5 0 0 0 2 1 0 2 0 2 2 0 0 0 0 0 14 0 1687.7829 Q9UIG0 Q9UIG0 732 745 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 2 0.002174 43.68 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 5562100 0 5562100 0 0 0 5562100 0 5562100 1567 952 1695 2547 4170 4170 1 LEVQATDREENK SKKKAVQRLEEQLMKLEVQATDREENKQIA LMKLEVQATDREENKQIALGTSKLNYLDPR K L E N K Q 1 1 1 1 0 1 3 0 0 0 1 1 0 0 0 0 1 0 0 1 0 0 12 1 1430.7001 P11387;B9EG90;Q9BVT2 P11387 701 712 TOP1 DNA topoisomerase 1 yes no 2;3 1.8071E-08 111.86 1 2 0.78598 1.2317 12.027 3 Plateau 0.77393 0.97985 NaN 1 0 Median 0.78365 1.2013 3.5318 2 0 Median 112920000 60730000 52192000 5450300 2981800 2468500 107470000 57748000 49724000 1568 733 1696 2548;2549;2550 4171;4172;4173;4174;4175;4176;4177 4177 6 LFDEEEDSSEK DADEKLFEDDDSNEKLFDEEEDSSEKLFDD SNEKLFDEEEDSSEKLFDDSDERGTLGGFG K L F E K L 0 0 0 2 0 0 4 0 0 0 1 1 0 1 0 2 0 0 0 0 0 0 11 0 1326.5463 O43719;B4DRS4 O43719 706 716 HTATSF1 HIV Tat-specific factor 1 yes no 2 5.7897E-242 206.69 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1569 702 1697 2551;2552 4178;4179;4180;4181;4182;4183;4184 4179 1035 0 LFEDDDSNEK DEDADGKEVEDADEKLFEDDDSNEKLFDEE DADEKLFEDDDSNEKLFDEEEDSSEKLFDD K L F E K L 0 0 1 3 0 0 2 0 0 0 1 1 0 1 0 1 0 0 0 0 0 0 10 0 1210.499 O43719;B4DRS4 O43719 696 705 HTATSF1 HIV Tat-specific factor 1 yes no 2 0.00023724 85.845 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1570 702 1698 2553;2554 4185;4186;4187;4188;4189;4190;4191 4185 1036 0 LFEESDDKEDEDADGK EAADKKAEEGDADEKLFEESDDKEDEDADG FEESDDKEDEDADGKEVEDADEKLFEDDDS K L F G K E 1 0 0 5 0 0 4 1 0 0 1 2 0 1 0 1 0 0 0 0 0 0 16 1 1840.7487 O43719 O43719 672 687 HTATSF1 HIV Tat-specific factor 1 yes yes 2 0.00094012 59.502 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1571 702 1699 2555;2556 4192;4193;4194 4194 1037 0 LFEESDDKEDEDADGKEVEDADEK EAADKKAEEGDADEKLFEESDDKEDEDADG DEDADGKEVEDADEKLFEDDDSNEKLFDEE K L F E K L 2 0 0 7 0 0 7 1 0 0 1 3 0 1 0 1 0 0 0 1 0 0 24 2 2756.1308 O43719 O43719 672 695 HTATSF1 HIV Tat-specific factor 1 yes yes 3 5.067E-24 84.365 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1572 702 1700 2557 4195;4196 4196 1037 0 LFLINEQSPR PIAFAAKGINKLLNKLFLINEQSPRASEET KLLNKLFLINEQSPRASEETLLGISKKAKQ K L F P R A 0 1 1 0 0 1 1 0 0 1 2 0 0 1 1 1 0 0 0 0 0 0 10 0 1215.6612 E9PFF8;B4DDJ6;B4DJ73;B4DVN9;B4DHL5;B4E228;Q6NW34 E9PFF8 188 197 C3orf17 Uncharacterized protein C3orf17 yes no 2 0.00018821 69.979 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1573 456 1701 2558;2559 4197;4198;4199 4197 668 0 LFNLSKEDDVR VPRRLGPKRASRIRKLFNLSKEDDVRQYVV RIRKLFNLSKEDDVRQYVVRKPLNKEGKKP K L F V R Q 0 1 1 2 0 0 1 0 0 0 2 1 0 1 0 1 0 0 0 1 0 0 11 1 1334.683 Q96DV6;A2A3R6;P62753;A2A3R5 Q96DV6 144 154 RPS6 40S ribosomal protein S6 yes no 3 0.019937 33.195 1 0.42572 0.62542 NaN 1 Median NaN NaN NaN 0 0 Median 0.42572 0.62542 NaN 1 0 Median 20626000 13587000 7039400 0 0 0 20626000 13587000 7039400 1574 303 1702 2560 4200;4201 4200 2 LFSPLHSGTR FASGFSASGTAASARLFSPLHSGTRFDMHK AASARLFSPLHSGTRFDMHKRSPLLRAPRF R L F T R F 0 1 0 0 0 0 0 1 1 0 2 0 0 1 1 2 1 0 0 0 0 0 10 0 1113.5931 Q03164;E9PR05 Q03164 678 687 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes no 2 0.00074966 68.676 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1575 798 1703;1704 2561;2562 4202;4203 4202 1287;1288 0 LFTNAVESLDEEEK TPFNTDLGENSGIGKLFTNAVESLDEEEKD KLFTNAVESLDEEEKDYYFSNSDSA_____ K L F E K D 1 0 1 1 0 0 4 0 0 0 2 1 0 1 0 1 1 0 0 1 0 0 14 0 1622.7675 Q6P0N0 Q6P0N0 1109 1122 MIS18BP1 Mis18-binding protein 1 yes yes 2 4.2982E-55 139.49 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1576 858 1705 2563;2564 4204;4205;4206;4207 4207 1422 0 LGAGEGGEASVSPEK DQPAARTPRSKKKKKLGAGEGGEASVSPEK LGAGEGGEASVSPEKTSTTSKGKAKRDKAS K L G E K T 2 0 0 0 0 0 3 4 0 0 1 1 0 0 1 2 0 0 0 1 0 0 15 0 1386.6627 E7ETY2;J3KQ96;Q13428;B4DRA2;Q9UFD4 E7ETY2 1367 1381 TCOF1;DKFZp434G1035 Treacle protein yes no 2 1.605E-285 212.32 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1577 608 1706 2565;2566 4208;4209;4210;4211;4212;4213;4214 4210 914;915 0 LGAGGGSPEKSPSAQELK ______________________________ GGGSPEKSPSAQELKEQGNRLFVGRKYPEA R L G L K E 2 0 0 0 0 1 2 4 0 0 2 2 0 0 2 3 0 0 0 0 0 0 18 1 1711.8741 H3BS86;Q9UNE7 H3BS86 13 30 STUB1 E3 ubiquitin-protein ligase CHIP yes no 2;3 6.6062E-11 73.928 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1578 666 1707 2567;2568 4215;4216;4217;4218 4218 991;992 0 LGEHNIDVLEGNEQFINAAK VVSAAHCYKSRIQVRLGEHNIDVLEGNEQF IDVLEGNEQFINAAKIITHPNFNGNTLDND R L G A K I 2 0 3 1 0 1 3 2 1 2 2 1 0 1 0 0 0 0 0 1 0 0 20 0 2210.0968 CON__P00761 CON__P00761 58 77 yes yes 3 0.0004239 46.362 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 7004100 7004100 0 7004100 7004100 0 0 0 0 + 1579 569 1708 2569 4219 4219 1 LGESLQSAER EGQKNIRLLRTELQKLGESLQSAERACCHS TELQKLGESLQSAERACCHSTGAGKLRQAL K L G E R A 1 1 0 0 0 1 2 1 0 0 2 0 0 0 0 2 0 0 0 0 0 0 10 0 1088.5462 O95235 O95235 751 760 KIF20A Kinesin-like protein KIF20A yes yes 2 0.010057 53.756 1 0.44422 0.57111 NaN 1 Median NaN NaN NaN 0 0 Median 0.44422 0.57111 NaN 1 0 Median 4922600 3037900 1884700 0 0 0 4922600 3037900 1884700 1580 716 1709 2570 4220 4220 1 LGFSLTPSK EPSTKNTTADKLAIKLGFSLTPSKGKTSGT DKLAIKLGFSLTPSKGKTSGTTSSSSDSSA K L G S K G 0 0 0 0 0 0 0 1 0 0 2 1 0 1 1 2 1 0 0 0 0 0 9 0 948.52803 P38432 P38432 298 306 COIL Coilin yes yes 2 2.457E-05 75.416 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1581 756 1710 2571;2572 4221;4222 4221 1967 0 LGGHGPSFPLK GKEDGSGDRGDGPFRLGGHGPSFPLKGITE GPFRLGGHGPSFPLKGITEQQKEGLEIVKM R L G L K G 0 0 0 0 0 0 0 3 1 0 2 1 0 1 2 1 0 0 0 0 0 0 11 0 1108.6029 Q53T09;P13010 Q53T09 21 31 XRCC5 X-ray repair cross-complementing protein 5 yes no 3 0.028344 22.72 1 0.50168 0.65968 NaN 1 Median NaN NaN NaN 0 0 Median 0.50168 0.65968 NaN 1 0 Median 12695000 8233800 4460800 0 0 0 12695000 8233800 4460800 1582 735 1711 2573 4223 4223 1 LGGLRPESPESLTSVSR ______________________________ GLRPESPESLTSVSRTRRALVEFESNPEET R L G S R T 0 2 0 0 0 0 2 2 0 0 3 0 0 0 2 4 1 0 0 1 0 0 17 1 1783.9428 Q9H6F5;H0YG79;Q6ZW18 Q9H6F5 11 27 CCDC86 Coiled-coil domain-containing protein 86 yes no 2;3 5.6912E-11 92.39 3 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1583 927 1712;1713 2574;2575;2576;2577 4224;4225;4226;4227;4228;4229 4228 1619;1620 0 LGIHEDSTNR ENYKKFYEAFSKNLKLGIHEDSTNRRRLSE SKNLKLGIHEDSTNRRRLSELLRYHTSQSG K L G N R R 0 1 1 1 0 0 1 1 1 1 1 0 0 0 0 1 1 0 0 0 0 0 10 0 1140.5523 A0A024RD80;P08238;B4DMA2;B4DGL0;Q9H6X9;A8K3W9 A0A024RD80 439 448 HSP90AB1 Heat shock protein HSP 90-beta yes no 3 0.0017073 55.353 1 4.2691 5.8617 NaN 1 Median NaN NaN NaN 0 0 Median 4.2691 5.8617 NaN 1 0 Median 46876000 8421200 38454000 0 0 0 46876000 8421200 38454000 1584 167 1714 2578 4230;4231 4230 2 LGLHVTPSNVDQVSTPPAAK AGTRLQAFFHIQAQKLGLHVTPSNVDQVST TPSNVDQVSTPPAAKKSRI___________ K L G A K K 2 0 1 1 0 1 0 1 1 0 2 1 0 0 3 2 2 0 0 3 0 0 20 0 2030.0797 D3DS96;Q9NRL2;B3KND8 D3DS96 1532 1551 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes no 3 4.2049E-16 79.332 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1585 591 1715 2579;2580 4232;4233 4232 879;1908 0 LGSPDYGNSALLSLPGYRPTTR QASLRATSSTQSLARLGSPDYGNSALLSLP NSALLSLPGYRPTTRSSARRSQAGVSSGAP R L G T R S 1 2 1 1 0 0 0 3 0 0 4 0 0 0 3 3 2 0 2 0 0 0 22 1 2334.1968 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q59HB8;Q96HN5;H0YFY6;Q7Z757;Q9UNL7 A0A087WY61 1844 1865 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 yes no 3 3.4202E-12 62.19 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1586 71 1716 2581 4234 4234 87 0 LGTVTEAPR DSETEKPEADDPKEKLGTVTEAPRAQQAHG DDPKEKLGTVTEAPRAQQAHGPACWTQRAE K L G P R A 1 1 0 0 0 0 1 1 0 0 1 0 0 0 1 0 2 0 0 1 0 0 9 0 942.51345 J3QQJ0 J3QQJ0 74 82 SAP30BP yes yes 2 0.020122 44.447 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1587 683 1717 2582 4235 4235 1937 0 LGVSVSPSR EWKDPWRRSKSPKKKLGVSVSPSRARRRRK KSPKKKLGVSVSPSRARRRRKTSASSASAS K L G S R A 0 1 0 0 0 0 0 1 0 0 1 0 0 0 1 3 0 0 0 2 0 0 9 0 900.50288 E7ERS3;B4DTK7;Q86VM9;Q86YU5;H3BP01 E7ERS3 553 561 ZC3H18;FLJ00419 Zinc finger CCCH domain-containing protein 18 yes no 2 3.9059E-09 105.13 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1588 498 1718 2583;2584 4236;4237;4238 4236 730;731 0 LGVTNTIISHYDGR ANAERLKSVVGNLHRLGVTNTIISHYDGRQ RLGVTNTIISHYDGRQFPKVVGGFDRVLLD R L G G R Q 0 1 1 1 0 0 0 2 1 2 1 0 0 0 0 1 2 0 1 1 0 0 14 0 1544.7947 P46087 P46087 432 445 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 3 3.8261E-06 74.789 1 0.57628 0.7615 NaN 1 Median NaN NaN NaN 0 0 Median 0.57628 0.7615 NaN 1 0 Median 27319000 16379000 10940000 0 0 0 27319000 16379000 10940000 1589 763 1719 2585 4239;4240;4241 4240 3 LHDFVSK ETDSVGTPQSNGGMRLHDFVSKTVIKPESC PQSNGGMRLHDFVSKTVIKPESCVPCGKRI R L H S K T 0 0 0 1 0 0 0 0 1 0 1 1 0 1 0 1 0 0 0 1 0 0 7 0 844.4443 B2RE34;A0A024R136;Q9H0H5;F8VRD2;F8VRL2;H0YIK5 B2RE34 286 292 RACGAP1 Rac GTPase-activating protein 1 yes no 2 0.011633 52.716 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 5262900 0 5262900 0 0 0 5262900 0 5262900 1590 25 1720 2586 4242 4242 1 LHDLYWQAMK QQSLQQGAHSTGSSRLHDLYWQAMKTLGVQ TGSSRLHDLYWQAMKTLGVQRPKLEKKDAK R L H M K T 1 0 0 1 0 1 0 0 1 0 2 1 1 0 0 0 0 1 1 0 0 0 10 0 1303.6383 Q9BQG0;I3L1L3;B4DE42 Q9BQG0 1131 1140 MYBBP1A Myb-binding protein 1A yes no 2 0.0044633 66.299 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2255600 2255600 0 0 0 0 2255600 2255600 0 1591 914 1721 2587 4243 4243 210 1 LHESVFEFLSK L H S K 0 0 0 0 0 0 2 0 1 0 2 1 0 2 0 2 0 0 0 1 0 0 11 0 1334.6871 REV__C9JAQ0 yes no 2 0.0093458 41.399 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 + 1592 972 1722 2588 4244 4244 1764 0 LHFFMPGFAPLTSR ADLRKLAVNMVPFPRLHFFMPGFAPLTSRG RLHFFMPGFAPLTSRGSQQYRALTVPELTQ R L H S R G 1 1 0 0 0 0 0 1 1 0 2 0 1 3 2 1 1 0 0 0 0 0 14 0 1619.8283 B4DJ43;Q8N6N5;Q8IZ29;Q8IWP6;P04350;P68371;Q1KSF8;Q96HX0;B4DFH6;Q96B85;B4DXZ5;B4E386;Q9UGA2;K7ESM5;Q9BUU9;O43209;B4E052;B7Z4N1;Q5ST81;B7ZAK1;B4DQN9;A0A024QZU2;B3KS31;B3KML9;A0A075B736;B4DE77;Q5SQY0;B4DP54;B2R6L0;Q3ZCM7;A6NNZ2;Q9BVA1;Q13885;Q9BUF5;I0CMK4;B4DMU8;B7ZAF0;Q5JP53;Q6LC01;Q5SU16;B4DY90;P07437 B4DJ43 181 194 TUBB2C;TUBB4A;TUBB4B;XTP3TPATP1;TUBB;DKFZp566F223;TUBB6;TUBB2B;TUBB8;TUBB2A;TUBB4Q Tubulin beta-4A chain;Tubulin beta-4B chain;Tubulin beta-8 chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-6 chain;Tubulin beta chain no no 3 0.00098562 46.282 1 2.7129 3.6028 NaN 1 Median NaN NaN NaN 0 0 Median 2.7129 3.6028 NaN 1 0 Median 10835000 3006200 7829300 0 0 0 10835000 3006200 7829300 1593 469;484 1723 2589 4245 4245 92 1 LHGELQDR GTGKTFSFAIPLIEKLHGELQDRKRGRAPQ AIPLIEKLHGELQDRKRGRAPQVLVLAPTR K L H D R K 0 1 0 1 0 1 1 1 1 0 2 0 0 0 0 0 0 0 0 0 0 0 8 0 966.48829 Q9NR30 Q9NR30 248 255 DDX21 Nucleolar RNA helicase 2 yes yes 2;3 3.4409E-06 87.251 2 0.49521 0.63728 NaN 1 Median NaN NaN NaN 0 0 Median 0.49521 0.63728 NaN 1 0 Median 46907000 39695000 7211400 0 0 0 46907000 39695000 7211400 1594 934 1724 2590;2591 4246;4247;4248 4248 3 LHGELQDRK GTGKTFSFAIPLIEKLHGELQDRKRGRAPQ IPLIEKLHGELQDRKRGRAPQVLVLAPTRE K L H R K R 0 1 0 1 0 1 1 1 1 0 2 1 0 0 0 0 0 0 0 0 0 0 9 1 1094.5833 Q9NR30 Q9NR30 248 256 DDX21 Nucleolar RNA helicase 2 yes yes 3 0.010155 29.755 1 0.41206 0.54574 NaN 1 Median NaN NaN NaN 0 0 Median 0.41206 0.54574 NaN 1 0 Median 8833900 6366800 2467100 0 0 0 8833900 6366800 2467100 1595 934 1725 2592 4249 4249 1 LHHYSDF YFALGNEKGKALMYRLHHYSDF________ KGKALMYRLHHYSDF_______________ R L H D F - 0 0 0 1 0 0 0 0 2 0 1 0 0 1 0 1 0 0 1 0 0 0 7 0 917.40317 Q9Y5J1 Q9Y5J1 550 556 UTP18 U3 small nucleolar RNA-associated protein 18 homolog yes yes 2 0.0057744 54.537 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 5377200 0 0 5377200 0 0 0 0 0 1596 968 1726 2593 4250 4250 1 LHIFNAK GFCHVGEEENEARGKLHIFNAKKAAAHYKC EENEARGKLHIFNAKKAAAHYKCMLFSSGT K L H A K K 1 0 1 0 0 0 0 0 1 1 1 1 0 1 0 0 0 0 0 0 0 0 7 0 841.48102 Q8IWS0;A0A0D9SGE8;Q5JRC6 Q8IWS0 228 234 PHF6 PHD finger protein 6 yes no 2 2.5265E-06 101.47 1 0.57346 0.71192 NaN 1 Median NaN NaN NaN 0 0 Median 0.57346 0.71192 NaN 1 0 Median 29047000 17953000 11094000 0 0 0 29047000 17953000 11094000 1597 874 1727 2594 4251 4251 1 LHLVDLAGSER EQRKKSDKNSSFRSKLHLVDLAGSERQKKT FRSKLHLVDLAGSERQKKTKAEGDRLKEGI K L H E R Q 1 1 0 1 0 0 1 1 1 0 3 0 0 0 0 1 0 0 0 1 0 0 11 0 1208.6513 Q59HG1;O95239;B4DYE2;Q2VIQ3;Q6PKB2;Q5JRK0;Q8IWH8;Q05CT3;D3DQ90;H0Y718;J3KPF9;Q2UVF2;A0A087X011;E9PES4;B4DHG8;Q17RI8;B7ZKX5;Q9Y496;Q6ZMV9 Q59HG1 239 249 KIF4A;KIF4B;KIF6;KIF3A Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B;Kinesin-like protein KIF3A;Kinesin-like protein KIF6 yes no 2 0.014115 45.137 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3528000 0 3528000 0 0 0 3528000 0 3528000 1598 717 1728 2595 4252 4252 1 LHNAIEGGTQLSR KSQQSAGKEYVGIVRLHNAIEGGTQLSRAL VRLHNAIEGGTQLSRALETLTGALFQRPPL R L H S R A 1 1 1 0 0 1 1 2 1 1 2 0 0 0 0 1 1 0 0 0 0 0 13 0 1394.7266 O60832;H7C0M1;C9IYT0;U5UA77;H7BZF2 O60832 159 171 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes no 2;3 1.1881E-10 84.297 2 0.55017 0.73621 5.3852 2 Median NaN NaN NaN 0 0 Median 0.55017 0.73621 5.3852 2 0 Median 40519000 27326000 13193000 0 0 0 40519000 27326000 13193000 1599 706 1729 2596;2597 4253;4254 4253 2 LHNELQSGSLR SRPSGRSDLTVDAVKLHNELQSGSLRLGKS DAVKLHNELQSGSLRLGKSEAPETPMEEEA K L H L R L 0 1 1 0 0 1 1 1 1 0 3 0 0 0 0 2 0 0 0 0 0 0 11 0 1252.6524 B3KMR5;Q5JTH9;A0A087X1U8 B3KMR5 58 68 RRP12 RRP12-like protein yes no 3 0.0074976 37.426 1 1.1708 1.5286 NaN 1 Median NaN NaN NaN 0 0 Median 1.1708 1.5286 NaN 1 0 Median 12751000 6449300 6301800 0 0 0 12751000 6449300 6301800 1600 430 1730 2598 4255 4255 1 LHTFESHK DKTVALWDLRNLKLKLHTFESHKDEIFQVH LRNLKLKLHTFESHKDEIFQVHWSPHNETI K L H H K D 0 0 0 0 0 0 1 0 2 0 1 1 0 1 0 1 1 0 0 0 0 0 8 0 997.49813 E9PC52;Q6FHQ0;Q16576;A8K6A2;Q5JP02 E9PC52 300 307 RBBP7 Histone-binding protein RBBP7 yes no 2 0.025278 47.082 1 0.70053 0.86134 NaN 1 Median 0.70053 0.86134 NaN 1 0 Median NaN NaN NaN 0 0 Median 5458000 2974600 2483300 5458000 2974600 2483300 0 0 0 1601 612 1731 2599 4256 4256 1 LHTLEEEK KREKINELLKYIEERLHTLEEEKEELAQYQ LKYIEERLHTLEEEKEELAQYQKWDKMRRA R L H E K E 0 0 0 0 0 0 3 0 1 0 2 1 0 0 0 0 1 0 0 0 0 0 8 0 997.50803 Q86VX4;B0AZQ4;Q9UQE7 Q86VX4 200 207 SMC3 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 3 yes no 2 0.023598 49.442 1 0.77282 0.96569 NaN 1 Median NaN NaN NaN 0 0 Median 0.77282 0.96569 NaN 1 0 Median 9271900 5194800 4077100 0 0 0 9271900 5194800 4077100 1602 388 1732 2600 4257 4257 1 LHVDPENFR LKGTFSQLSELHCDKLHVDPENFR______ ELHCDKLHVDPENFR_______________ K L H F R - 0 1 1 1 0 0 1 0 1 0 1 0 0 1 1 0 0 0 0 1 0 0 9 0 1125.5567 Q5XTR9;Q3Y9I8;Q4TZM4;Q9BWU5;Q8IZI0;Q8IUL9;Q6V0K9;Q6J1Z7;Q670S4;Q52MT0;Q4TWB7;Q4JLR8;Q4F786;Q3LR79;Q0Z944;E9NGZ5;D1MGQ0;B3VL05;B2M1S8;B2M1S6;A1YZ08;A0A1B4WRL5;Q9BWV6;Q9GZL9;Q9UK54;B3VL86;E9PFT6;D9YZU5;C8C504;A0N071;Q14473;CON__Q3SX09;P68871;P02042 Q5XTR9 26 34 HBD/HBB;HBB;HBD Hemoglobin subunit beta;LVV-hemorphin-7;Spinorphin;Hemoglobin subunit delta yes no 2;3 0.0049829 60.59 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 28404000 28404000 0 0 0 0 28404000 28404000 0 + 1603 289 1733 2601;2602 4258;4259 4259 2 LHVGNISPTCTNK INVEASKNKSKTSTKLHVGNISPTCTNKEL TKLHVGNISPTCTNKELRAKFEEYGPVIEC K L H N K E 0 0 2 0 1 0 0 1 1 1 1 1 0 0 1 1 2 0 0 1 0 0 13 0 1439.7191 D6R9K7;J3QRR5;E9PB51;Q9BWF3 D6R9K7 80 92 RBM4 RNA-binding protein 4 yes no 2 2.0067E-54 136.6 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1604 595 1734 2603 4260 4260 889 0 LHVIPR KDCSIIKWSVESGRKLHVIPRAKKGAEGKP KWSVESGRKLHVIPRAKKGAEGKPPGHSSH K L H P R A 0 1 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 0 1 0 0 6 0 733.45989 O43818 O43818 181 186 RRP9 U3 small nucleolar RNA-interacting protein 2 yes yes 2 0.020096 81.297 1 0.51959 0.67441 NaN 1 Median NaN NaN NaN 0 0 Median 0.51959 0.67441 NaN 1 0 Median 22238000 14437000 7800500 0 0 0 22238000 14437000 7800500 1605 703 1735 2604 4261 4261 1 LHVTALDYLAPYAK ______________________________ RLHVTALDYLAPYAKYKVWIKPGAEQSFLY R L H A K Y 3 0 0 1 0 0 0 0 1 0 3 1 0 0 1 0 1 0 2 1 0 0 14 0 1573.8504 J3QRD6;J3QRR4;J3QLW7;B3KM49;Q9Y221 J3QRD6 6 19 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog yes no 2;3 0.0022238 48.981 2 0.46083 0.61146 43.505 2 Median NaN NaN NaN 0 0 Median 0.46083 0.61146 43.505 2 0 Median 10634000 7457600 3176300 0 0 0 10634000 7457600 3176300 1606 426 1736 2605;2606 4262;4263;4264 4262 3 LHYCVSCAIHSK ASVFDAYVLPKLYVKLHYCVSCAIHSKVVR YVKLHYCVSCAIHSKVVRNRSREARKDRTP K L H S K V 1 0 0 0 2 0 0 0 2 1 1 1 0 0 0 2 0 0 1 1 0 0 12 0 1473.6857 A0A024RB14;P62854;Q5JNZ5;Q76N56 A0A024RB14 71 82 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 yes no 3 0.0010623 60.49 1 1 0.50156 0.6234 83.365 2 Median 0.90686 1.124 NaN 1 0 Median 0.2774 0.34575 NaN 1 0 Median 46981000 32347000 14634000 13392000 6464500 6927300 33589000 25882000 7706500 1607 136 1737 2607;2608 4265;4266;4267;4268;4269 4266 5 LIDHLENTK ALAKKPHIIIATPGRLIDHLENTKGFNLRA IATPGRLIDHLENTKGFNLRALKYLVMDEA R L I T K G 0 0 1 1 0 0 1 0 1 1 2 1 0 0 0 0 1 0 0 0 0 0 9 0 1081.5768 Q53GJ1;Q9H4E3;A0A024RAS3;Q9H0S4;A4UCU0;F5H1N9 Q53GJ1 146 154 E4-DBP;hCG_27698;DDX47 Probable ATP-dependent RNA helicase DDX47 yes no 3 0.0077508 38.804 1 0.5713 0.75554 NaN 1 Median NaN NaN NaN 0 0 Median 0.5713 0.75554 NaN 1 0 Median 13154000 8461700 4691800 0 0 0 13154000 8461700 4691800 1608 133 1738 2609 4270 4270 1 LIEDEFIIDESDQSFASR AATAPPHSCPPDDTKLIEDEFIIDESDQSF DEFIIDESDQSFASRSWITIPRKAGSLKQR K L I S R S 1 1 0 3 0 1 3 0 0 3 1 0 0 2 0 3 0 0 0 0 0 0 18 0 2112.9851 Q03188;H0Y8J2 Q03188 298 315 CENPC Centromere protein C yes no 2 1.4049E-10 82.877 2 2 0.41006 0.53802 NaN 1 Median NaN NaN NaN 0 0 Median 0.41006 0.53802 NaN 1 0 Median 12160000 8066800 4093300 0 0 0 12160000 8066800 4093300 1609 799 1739;1740;1741 2610;2611;2612;2613 4271;4272;4273;4274;4275 4273 1308;1309 1 LIEDKPR LDKLDGTEINGRNIRLIEDKPRTSHRRSYS EINGRNIRLIEDKPRTSHRRSYSGSRSRSR R L I P R T 0 1 0 1 0 0 1 0 0 1 1 1 0 0 1 0 0 0 0 0 0 0 7 1 869.49707 V9HVZ0;A8K588;Q13247;Q59GY3 V9HVZ0 178 184 HEL-S-91;SRSF6 Serine/arginine-rich splicing factor 6 yes no 2 0.029515 86.086 1 0.53782 0.71878 NaN 1 Median NaN NaN NaN 0 0 Median 0.53782 0.71878 NaN 1 0 Median 9947200 6298300 3648900 0 0 0 9947200 6298300 3648900 1610 362 1742 2614 4276 4276 1 LIEQEEYLNVQVK EMRNTLEKFTASIQRLIEQEEYLNVQVKEL QRLIEQEEYLNVQVKELEANVLATAPDKKK R L I V K E 0 0 1 0 0 2 3 0 0 1 2 1 0 0 0 0 0 0 1 2 0 0 13 0 1603.8457 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 828 840 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 2 3.8971E-122 169.65 1 3 0.65519 0.86382 3.798 3 Median 0.72323 0.88574 NaN 1 0 Median 0.65199 0.84267 3.505 2 0 Median 45064000 26471000 18593000 11457000 6324200 5132500 33607000 20147000 13460000 1611 941 1743 2615;2616;2617;2618 4277;4278;4279;4280;4281;4282 4278 6 LIEVDDERK ______________________________ ATGCQKLIEVDDERKLRTFYEKRMATEVAA K L I R K L 0 1 0 2 0 0 2 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 9 1 1115.5823 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 15 23 RPS6 40S ribosomal protein S6 yes no 2;3 6.7528E-05 92.439 2 2 0.64547 0.92342 38.519 4 Median 1.0097 1.3094 6.1526 2 0 Median 0.4205 0.67392 1.3095 2 0 Median 715100000 461990000 253100000 228590000 116730000 111860000 486510000 345270000 141240000 1612 303 1744 2619;2620;2621;2622 4283;4284;4285;4286;4287;4288;4289 4284 7 LIFSNSK AGNYESPMELCKDVRLIFSNSKAYTPSKRS MELCKDVRLIFSNSKAYTPSKRSRIYSMSL R L I S K A 0 0 1 0 0 0 0 0 0 1 1 1 0 1 0 2 0 0 0 0 0 0 7 0 807.44905 Q8WWQ0;Q9NWP3 Q8WWQ0 1387 1393 PHIP PH-interacting protein yes no 2 0.0069259 78.113 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1613 894 1745 2623;2624 4290;4291;4292 4290 1506 0 LILTLT SHLEEKKRKRKKREKLILTLT_________ KRKRKKREKLILTLT_______________ K L I L T - 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 2 0 0 0 0 0 6 0 672.44218 Q5TDG3;Q9UNX4;Q59GA8;B3KMW5 Q5TDG3 938 943 WDR3 WD repeat-containing protein 3 yes no 1 1.3958E-56 143.02 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1614 848 1746 2625 4293;4294 4293 2006 0 LIPITGGNARSPEDQLGK QSKSNNVEETEIHWKLIPITGGNARSPEDQ ITGGNARSPEDQLGKHGEKQTPGMKSPEEQ K L I G K H 1 1 1 1 0 1 1 3 0 2 2 1 0 0 2 1 1 0 0 0 0 0 18 1 1865.0007 Q9UK61;A0A024R363 Q9UK61 917 934 FAM208A;C3orf63 Protein FAM208A yes no 2;3 1.682E-06 54.501 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1615 954 1747 2626;2627 4295;4296 4296 1710;2054 0 LISPLASPADGVK TEKESAWSPPPIEIRLISPLASPADGVKSK IRLISPLASPADGVKSKPRKTTEVTGTGLG R L I V K S 2 0 0 1 0 0 0 1 0 1 2 1 0 0 2 2 0 0 0 1 0 0 13 0 1266.7184 Q8WYP5 Q8WYP5 2220 2232 AHCTF1 Protein ELYS yes yes 2 3.6408E-42 133.93 5 4 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1616 897 1748;1749 2628;2629;2630;2631;2632;2633;2634;2635;2636 4297;4298;4299;4300;4301;4302;4303;4304;4305;4306;4307;4308;4309;4310;4311;4312;4313;4314;4315;4316;4317;4318;4319;4320 4311 1526;1527 0 LITPPPPPPSPER ERLFKKKEASHFQSKLITPPPPPPSPERVG SKLITPPPPPPSPERVGISSIDISQSRSWL K L I E R V 0 1 0 0 0 0 1 0 0 1 1 0 0 0 7 1 1 0 0 0 0 0 13 0 1396.7715 D2SNZ4;Q96HE9;J3QKY4;J3QR53 D2SNZ4 31 43 PRR11 Proline-rich protein 11 yes no 2 0.0014435 50.653 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1617 587 1750 2637 4321;4322 4321 874;1905 0 LIVVLEGASLETVK KRPRLGAGNKIGGRRLIVVLEGASLETVKV RLIVVLEGASLETVKVGKTYELLNCDKHKS R L I V K V 1 0 0 0 0 0 2 1 0 1 3 1 0 0 0 1 1 0 0 3 0 0 14 0 1469.8705 B4DP65;V9GYP5;B4DQC7;A0A087WWQ2;A8K6D2;Q92979 B4DP65 43 56 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 yes no 2 0.00013381 68.44 1 0.72972 0.90054 NaN 1 Median NaN NaN NaN 0 0 Median 0.72972 0.90054 NaN 1 0 Median 24320000 14626000 9693900 0 0 0 24320000 14626000 9693900 1618 193 1751 2638 4323 4323 1 LKAESISEEADSEPGR HACNRTAGPSTSVQKLKAESISEEADSEPG KAESISEEADSEPGRSGGRKYNTFHKNASF K L K G R S 2 1 0 1 0 0 4 1 0 1 1 1 0 0 1 3 0 0 0 0 0 0 16 1 1716.8166 Q9NSI6 Q9NSI6 1782 1797 BRWD1 Bromodomain and WD repeat-containing protein 1 yes yes 2 1.0301E-07 86.367 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1619 938 1752;1753 2639;2640 4324;4325;4326;4327 4327 1652;1653;1654 0 LKEDVLEQR KAEARAFEEDQVAGRLKEDVLEQRGRLQKL DQVAGRLKEDVLEQRGRLQKLVAKEIQAPA R L K Q R G 0 1 0 1 0 1 2 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 9 1 1128.6139 O43818 O43818 112 120 RRP9 U3 small nucleolar RNA-interacting protein 2 yes yes 2 0.0017401 70.1 1 0.41884 0.55577 NaN 1 Median NaN NaN NaN 0 0 Median 0.41884 0.55577 NaN 1 0 Median 9054200 6349300 2704900 0 0 0 9054200 6349300 2704900 1620 703 1754 2641 4328 4328 1 LKGDDLQAIKK FNSKSGQRGSSKSGKLKGDDLQAIKKELTQ KSGKLKGDDLQAIKKELTQIKQKVDSLLEN K L K K K E 1 0 0 2 0 1 0 1 0 1 2 3 0 0 0 0 0 0 0 0 0 0 11 2 1227.7187 G3V576;G3V4W0;B4DY08;B2R5W2;G3V4C1;B2R603;G3V2Q1;A8K9A4;P07910;B3KX96;G3V5V7;B4DQQ2;G3V2D6 G3V576 188 198 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 2;3 3.8196E-06 98.105 2 0.79368 1.1461 0.57928 2 Median NaN NaN NaN 0 0 Median 0.79368 1.1461 0.57928 2 0 Median 153030000 85240000 67790000 0 0 0 153030000 85240000 67790000 1621 378 1755 2642;2643 4329;4330 4329 2 LKLEDDSEESDAEFDEGFK LRRWNKLRLQDKEKRLKLEDDSEESDAEFD DDSEESDAEFDEGFKVPGFLFKKLFKYQQT R L K F K V 1 0 0 4 0 0 5 1 0 0 2 2 0 2 0 2 0 0 0 0 0 0 19 1 2201.9488 A0JP10;Q03468 A0JP10 480 498 ERCC6 DNA excision repair protein ERCC-6 yes no 2 3.1282E-11 77.912 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1622 298 1756 2644 4331;4332 4331 444;445 0 LKLSPSPSSR EISAYRKLLEGEEERLKLSPSPSSRVTVSR GEEERLKLSPSPSSRVTVSRASSSRSVRTT R L K S R V 0 1 0 0 0 0 0 0 0 0 2 1 0 0 2 4 0 0 0 0 0 0 10 1 1070.6084 A0A0A7M1X5;Q03252;P20700;B4DZT3 P20700 388 397 LMNB2;LMNB1 Lamin-B2;Lamin-B1 no no 2 0.00024615 84.734 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1623 745;233 1757;1758 2645;2646;2647;2648 4333;4334;4335;4336;4337;4338 4334 330;331 0 LKSEDGVEGDLGETQSR DEEYQRIYTTKIKPRLKSEDGVEGDLGETQ SEDGVEGDLGETQSRTITVTRRVTAYTVDV R L K S R T 0 1 0 2 0 1 3 3 0 0 2 1 0 0 0 2 1 0 0 1 0 0 17 1 1818.8595 Q09666;B4DTV0 Q09666 133 149 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 2 1.2763E-26 115.63 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1624 804 1759 2649;2650 4339;4340;4341 4340 1316 0 LLADQAEAR MEHIHKLKADKARKKLLADQAEARRSKTKE DKARKKLLADQAEARRSKTKEARKRREERL K L L A R R 3 1 0 1 0 1 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 9 0 985.51926 Q8IWR8;J3QR09;J3KTE4;Q53G49;P84098 Q8IWR8 135 143 RPL19 Ribosomal protein L19;60S ribosomal protein L19 yes no 2 0.020501 46.158 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 4751300 4751300 0 0 0 0 4751300 4751300 0 1625 682 1760 2651 4342 4342 1 LLADQAEARR MEHIHKLKADKARKKLLADQAEARRSKTKE KARKKLLADQAEARRSKTKEARKRREERLQ K L L R R S 3 2 0 1 0 1 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 10 1 1141.6204 Q8IWR8;J3QR09;J3KTE4;Q53G49;P84098 Q8IWR8 135 144 RPL19 Ribosomal protein L19;60S ribosomal protein L19 yes no 3 0.0062403 33.89 1 0.33321 0.46009 NaN 1 Median NaN NaN NaN 0 0 Median 0.33321 0.46009 NaN 1 0 Median 6200800 3725400 2475400 0 0 0 6200800 3725400 2475400 1626 682 1761 2652 4343 4343 1 LLASANLEEVTMK KKPPTDEELKETIKKLLASANLEEVTMKQI KKLLASANLEEVTMKQICKKVYENYPTYDL K L L M K Q 2 0 1 0 0 0 2 0 0 0 3 1 1 0 0 1 1 0 0 1 0 0 13 0 1417.7487 P35659;B4DFG0;B4DNW3;H0Y993 P35659 332 344 DEK Protein DEK yes no 2 1.2701E-05 67.153 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 5507600 0 5507600 0 0 0 5507600 0 5507600 1627 754 1762;1763 2653;2654;2655 4344;4345;4346;4347 4346 169 1180 3 LLASPSSR RSRVFDLQFSTDSPRLLASPSSRSIDISAT FSTDSPRLLASPSSRSIDISATIPKFTNTQ R L L S R S 1 1 0 0 0 0 0 0 0 0 2 0 0 0 1 3 0 0 0 0 0 0 8 0 829.46577 B4DRG7;E9PHA2;A8K4T8;Q15003;C9J470;C9JZP1 B4DRG7 60 67 NCAPH Condensin complex subunit 2 yes no 2 5.8334E-05 94.309 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1628 354 1764 2656 4348;4349;4350;4351 4350 539 0 LLDESESAASSR KKYNLHPGVTDYMDRLLDESESAASSRAPS MDRLLDESESAASSRAPSPPPTASNSSNSQ R L L S R A 2 1 0 1 0 0 2 0 0 0 2 0 0 0 0 4 0 0 0 0 0 0 12 0 1263.5943 Q8N108 Q8N108 363 374 MIER1 Mesoderm induction early response protein 1 yes yes 2 0.0022433 59.225 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1629 878 1765 2657 4352 4352 1474 0 LLEAISSLDGK SEDEGDNDGERKHQKLLEAISSLDGKNRRK KHQKLLEAISSLDGKNRRKLAERSEASLKV K L L G K N 1 0 0 1 0 0 1 1 0 1 3 1 0 0 0 2 0 0 0 0 0 0 11 0 1144.634 Q9BVJ6;O60531 Q9BVJ6 46 56 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes no 2 3.994E-05 92.19 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1630 919 1766 2658 4353 4353 1596 0 LLEEEIQAPTSSK TPSTRTVLLDPADEKLLEEEIQAPTSSKRS EKLLEEEIQAPTSSKRSQQHAKVVPWMRKT K L L S K R 1 0 0 0 0 1 3 0 0 1 2 1 0 0 1 2 1 0 0 0 0 0 13 0 1443.7457 B4DGJ5;A0A024R0H6;Q8N7H5 B4DGJ5 54 66 PAF1 RNA polymerase II-associated factor 1 homolog yes no 2 8.4595E-06 71.879 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1631 16 1767 2659 4354 4354 1772 0 LLEGEDAHLSSQQASGQSYSSR DVKTRLEQEIATYRRLLEGEDAHLSSQQAS HLSSQQASGQSYSSREVFTSSSSSSSRQTR R L L S R E 2 1 0 1 0 3 2 2 1 0 3 0 0 0 0 6 0 0 1 0 0 0 22 0 2349.0833 CON__P08779;P08779 CON__P08779 420 441 KRT16 Keratin, type I cytoskeletal 16 yes no 3 0.0045438 26.84 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1706700 1706700 0 1706700 1706700 0 0 0 0 + 1632 577 1768 2660 4355 4355 1 LLEGEDAHLSSSQFSSGSQSSR DVKTRLEQEIATYRRLLEGEDAHLSSSQFS HLSSSQFSSGSQSSRDVTSSSRQIRTKVMD R L L S R D 1 1 0 1 0 2 2 2 1 0 3 0 0 1 0 8 0 0 0 0 0 0 22 0 2308.0567 CON__P02533;P02533;A0A024R1X6;Q13092;CON__Q61782 CON__P02533 418 439 KRT14;K14 Keratin, type I cytoskeletal 14 yes no 3 1.9263E-06 54.223 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 18212000 18212000 0 0 0 0 18212000 18212000 0 + 1633 571 1769 2661 4356 4356 1 LLEGEECR NTKLALDVEIATYRKLLEGEECRLSGEGVG EIATYRKLLEGEECRLSGEGVGPVNISVVT K L L C R L 0 1 0 0 1 0 3 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 8 0 1004.4597 CON__P13647;P13647;B4E1T1;B4DL32;B4DRR0;B4DRU6;CON__P48668;CON__P04259;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;B2R853;H0YI76;B4DKV4;CON__O95678;O95678;CON__Q8N1N4-2;CON__Q7RTT2;CON__P07744;B4DRY0;Q8N1N4;H0YIC5;B4DQ49;CON__Q7RTS7;CON__Q6NXH9;CON__Q32MB2;F8W1S1;Q7RTS7;Q86Y46;P12036;CON__Q5XQN5;CON__Q922U2;CON__P50446;CON__Q8BGZ7;CON__P35908;P35908 CON__Q5XQN5 474 481 KRT5;KRT6C;KRT6A;KRT75;KRT78;KRT73;KRT74;NEFH;KRT2 Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 78;Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 73;Neurofilament heavy polypeptide;Keratin, type II cytoskeletal 2 epidermal no no 2 0.012277 52.716 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3562000 3562000 0 0 0 0 3562000 3562000 0 + 1634 584;580;583 1770 2662 4357 4357 1 LLEGEEER DIKLALDMEIHAYRKLLEGEEERLRLSPSP EIHAYRKLLEGEEERLRLSPSPTSQRSRGR K L L E R L 0 1 0 0 0 0 4 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 8 0 973.47164 P02545;W8QEH3;Q5I6Y5;Q8N519;Q3BDU5;Q5TCI8;A0A0C4DGC5;B4DFR3;A0A0A7M1X5;Q03252;P20700;B4DZT3;E9PBF6 P02545 379 386 LMNA;LMNB2;LMNB1 Prelamin-A/C;Lamin-A/C;Lamin-B2;Lamin-B1 no no 2 0.006433 73.248 1 1.5628 2.0281 NaN 1 Median NaN NaN NaN 0 0 Median 1.5628 2.0281 NaN 1 0 Median 13670000 5210600 8459300 0 0 0 13670000 5210600 8459300 1635 725;745;233 1771 2663 4358;4359 4359 2 LLEGEESR NVKMALDIEIATYRKLLEGEESRISLPLPN EIATYRKLLEGEESRISLPLPNFSSLNLRE K L L S R I 0 1 0 0 0 0 3 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 8 0 931.46108 V9HWE1;P08670;Q53HU8;B0YJC4;B3KRK8;B0YJC5;CON__Q9DCV7;Q9H319;Q53SB5;Q45VM8;Q45VM7;Q45VM6;L7RDA5;A5Z217;CON__Q9NSB2;CON__Q6ISB0;P17661;Q9NSB2;H7C5W5;B3KWQ6;P41219;CON__P05787;P05787;Q969I0;Q7L4M3;CON__Q9H552;CON__P08729;B3KY79;CON__Q3KNV1;P08729;Q96GE1 V9HWE1 403 410 HEL113;VIM;tmp_locus_29;DES;KRT84;PRPH;KRT8;KRT7 Vimentin;Desmin;Keratin, type II cuticular Hb4;Peripherin;Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 7 no no 2 0.017408 57.177 1 1.253 1.668 NaN 1 Median NaN NaN NaN 0 0 Median 1.253 1.668 NaN 1 0 Median 6795700 3006400 3789300 0 0 0 6795700 3006400 3789300 + 1636 731;575;576 1772 2664 4360;4361 4360 2 LLELTSSYSPDVSDYK LLAAAPQVGEKIAFKLLELTSSYSPDVSDY LELTSSYSPDVSDYKEGRILSHNPETQQVD K L L Y K E 0 0 0 2 0 0 1 0 0 0 3 1 0 0 1 4 1 0 2 1 0 0 16 0 1815.8778 P38432 P38432 481 496 COIL Coilin yes yes 2 4.9324E-19 110.38 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1637 756 1773 2665;2666 4362;4363;4364;4365 4362 1184 0 LLENPTINHQK IEEEFVSLVTGCCYRLLENPTINHQKNRPT CCYRLLENPTINHQKNRPTREAITHLLGVA R L L Q K N 0 0 2 0 0 1 1 0 1 1 2 1 0 0 1 0 1 0 0 0 0 0 11 0 1305.7041 Q15021;B4E0B7;B3KY03;B3KMS0;E7EN77;Q6ZV00;A0PJ76 Q15021 205 215 NCAPD2 Condensin complex subunit 1 yes no 2 0.014725 43.442 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2552700 2552700 0 0 0 0 2552700 2552700 0 1638 820 1774 2667 4366 4366 1 LLFSDSK L L S K 0 0 0 1 0 0 0 0 0 0 2 1 0 1 0 2 0 0 0 0 0 0 7 0 808.43307 REV__D6REZ4 yes no 2 0.022201 46.462 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 + 1639 975 1775 2668 4367 4367 1765 0 LLGLTPPEGGAGDRSEEEASSTEKPTK VTVTTISDLDLSGARLLGLTPPEGGAGDRS DRSEEEASSTEKPTKALPRKSRDPLLSQR_ R L L T K A 2 1 0 1 0 0 5 4 0 0 3 2 0 0 3 3 3 0 0 0 0 0 27 2 2755.3512 B4DGP7;V9GYY5;A0A024R1M6;Q9UGY1 B4DGP7 120 146 MGC3731;NOL12 Nucleolar protein 12 yes no 3 1.6363E-24 81.82 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1640 31 1776 2669 4368;4369 4369 28;29;1777 0 LLGSTLTSEEK YENNVHKMQLPFSSKLLGSTLTSEEKQERR FSSKLLGSTLTSEEKQERRQQQLRRLQELN K L L E K Q 0 0 0 0 0 0 2 1 0 0 3 1 0 0 0 2 2 0 0 0 0 0 11 0 1176.6238 Q9H9F9 Q9H9F9 284 294 ACTR5 Actin-related protein 5 yes yes 2 0.0029679 48.44 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1641 928 1777 2670 4370 4370 1626 0 LLHNSEDEQSLK RKLPHRNASAVARKKLLHNSEDEQSLKSEI RKKLLHNSEDEQSLKSEIEEEELKDENQLL K L L L K S 0 0 1 1 0 1 2 0 1 0 3 1 0 0 0 2 0 0 0 0 0 0 12 0 1411.6943 Q9NSI6 Q9NSI6 1674 1685 BRWD1 Bromodomain and WD repeat-containing protein 1 yes yes 2 0.0014047 63.185 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1642 938 1778 2671 4371 4371 1659 0 LLITSSPKPQTSDRPTDK KTSVPTGLRLPPPDRLLITSSPKPQTSDRP TSSPKPQTSDRPTDKPHASLSQRLPPPEKV R L L D K P 0 1 0 2 0 1 0 0 0 1 2 2 0 0 3 3 3 0 0 0 0 0 18 2 1983.0637 B2RWP5;Q96L73;Q658U6;Q9H6B5;A0A1D8GZ55;A0A1D8GZ56;Q9H6H8 B2RWP5 2123 2140 NSD1;DKFZp666C163 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific yes no 3 3.3424E-06 46.982 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1643 422 1779 2672 4372 4372 623 0 LLKPGEEPSEYTDEEDTK EWEMQFKEKYDYVGRLLKPGEEPSEYTDEE PGEEPSEYTDEEDTKDHNKQD_________ R L L T K D 0 0 0 2 0 0 5 1 0 0 2 2 0 0 2 1 2 0 1 0 0 0 18 1 2078.9532 D3DNX8;U3KQM0;O15173 D3DNX8 21 38 PGRMC2 Membrane-associated progesterone receptor component 2 yes no 3 4.2902E-07 63.376 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1644 589 1780 2673 4373 4373 1907 0 LLLAEDSEEEVDFLSER VEETPRVQGETQPQRLLLAEDSEEEVDFLS LAEDSEEEVDFLSERRMVKKSRTTSSSVIV R L L E R R 1 1 0 2 0 0 5 0 0 0 4 0 0 1 0 2 0 0 0 1 0 0 17 0 1992.9528 B4DYH4;Q14676;A1Z5I7;A1Z5I6 B4DYH4 34 50 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 2 4.6396E-28 119.56 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1645 508 1781 2674 4374;4375 4375 746 0 LLLDHQCLRDLLPKQEKR ERPRPEDQRLIYSGKLLLDHQCLRDLLPKQ DHQCLRDLLPKQEKRHVLHLVCNVKSPSKM K L L K R H 0 2 0 2 1 2 1 0 1 0 6 2 0 0 1 0 0 0 0 0 0 0 18 3 2274.2631 B4E3N8;H3BP08;A4UAE9;Q53FP9;A8K7S3;A8K6A0;Q15011 B4E3N8 62 79 HERPUD1 Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein yes no 3 0.0078672 24.793 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2277800 2277800 0 0 0 0 2277800 2277800 0 1646 319 1782 2675 4376 4376 1 LLLDPSSPPTK ______________________________ EERKLLLDPSSPPTKALNGAEPNYHSLPSA K L L T K A 0 0 0 1 0 0 0 0 0 0 3 1 0 0 3 2 1 0 0 0 0 0 11 0 1166.6547 H0YFI1;F5H479;F5GX19;F5H3Y3;Q6IAA8 H0YFI1 8 18 LAMTOR1 Ragulator complex protein LAMTOR1 yes no 2 0.0070425 66.267 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1647 631 1783 2676;2677 4377;4378 4377 957;958 0 LLLEFTDTSYEEK VLGYWDIRGLAHAIRLLLEFTDTSYEEKRY IRLLLEFTDTSYEEKRYTCGEAPDYDRSQW R L L E K R 0 0 0 1 0 0 3 0 0 0 3 1 0 1 0 1 2 0 1 0 0 0 13 0 1586.7716 A4UJ43;A0A0A0MTN3;Q6FGJ9;Q59EJ5;P21266 A4UJ43 23 35 GSTM3 Glutathione S-transferase Mu 3 yes no 2 0.002008 51.092 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 4090600 0 4090600 0 0 0 4090600 0 4090600 1648 228 1784 2678 4379 4379 1 LLLPGELAK KRSTITSREIQTAVRLLLPGELAKHAVSEG IQTAVRLLLPGELAKHAVSEGTKAVTKYTS R L L A K H 1 0 0 0 0 0 1 1 0 0 4 1 0 0 1 0 0 0 0 0 0 0 9 0 952.59572 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;P57053;Q96A08;L0R4T3;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257 A0A024RCJ2 101 109 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS;HIST1H2BA;ABCF2;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B no no 2 0.0011203 72.485 1 0.75693 0.90608 NaN 1 Median 0.75693 0.90608 NaN 1 0 Median NaN NaN NaN 0 0 Median 64178000 36779000 27399000 64178000 36779000 27399000 0 0 0 1649 10;158 1785 2679 4380;4381 4380 2 LLLPGELAKHAVSEGTK KRSTITSREIQTAVRLLLPGELAKHAVSEG LPGELAKHAVSEGTKAVTKYTSSK______ R L L T K A 2 0 0 0 0 0 2 2 1 0 4 2 0 0 1 1 1 0 0 1 0 0 17 1 1761.9989 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;A8K9J7;P57053;Q96A08;L0R4T3;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257 A0A024RCJ2 101 117 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS;HIST1H2BA;ABCF2;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B no no 4 0.0084682 19.071 1 0.59683 0.73384 NaN 1 Median NaN NaN NaN 0 0 Median 0.59683 0.73384 NaN 1 0 Median 9473200 6847600 2625500 0 0 0 9473200 6847600 2625500 1650 10;158 1786 2680 4382;4383 4383 2 LLMADQDSPLDLTVR TSPTAATTQNPVLSKLLMADQDSPLDLTVR LLMADQDSPLDLTVRKSQSEPSEQDGVLDL K L L V R K 1 1 0 3 0 1 0 0 0 0 4 0 1 0 1 1 1 0 0 1 0 0 15 0 1685.8658 A0A1B0GUH9;A2VCT1;Q96JN0 A0A1B0GUH9 28 42 LCOR Ligand-dependent corepressor yes no 2 0.00096468 54.237 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1651 286 1787 2681 4384 4384 61 432 0 LLMADQDSPLDLTVRK TSPTAATTQNPVLSKLLMADQDSPLDLTVR LMADQDSPLDLTVRKSQSEPSEQDGVLDLS K L L R K S 1 1 0 3 0 1 0 0 0 0 4 1 1 0 1 1 1 0 0 1 0 0 16 1 1813.9608 A0A1B0GUH9;A2VCT1;Q96JN0 A0A1B0GUH9 28 43 LCOR Ligand-dependent corepressor yes no 3 1.4423E-06 56.529 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1652 286 1788 2682 4385 4385 61 432 0 LLPHIR KAIRGHLENNPALEKLLPHIRGNVGFVFTK LENNPALEKLLPHIRGNVGFVFTKEDLTEI K L L I R G 0 1 0 0 0 0 0 0 1 1 2 0 0 0 1 0 0 0 0 0 0 0 6 0 747.47554 F8VWV4;F8VS58;F8VQY6;F8VPE8;F8VRK7;G3V210;F8VW21;F8VZS0;F8VU65;F8VWS0;Q53HW2;Q53HK9;A8K4Z4;A0A024RBS2;P05388 F8VWV4 64 69 RPLP0 60S acidic ribosomal protein P0 yes no 2 0.0049468 89.775 1 0.60855 0.78868 NaN 1 Median NaN NaN NaN 0 0 Median 0.60855 0.78868 NaN 1 0 Median 13886000 7792300 6094000 0 0 0 13886000 7792300 6094000 1653 149 1789 2683 4386 4386 1 LLSGPSQESPQTLGK RRCRGPLAMGLAQPRLLSGPSQESPQTLGK LLSGPSQESPQTLGKESRGLRQQGTSVAQS R L L G K E 0 0 0 0 0 2 1 2 0 0 3 1 0 0 2 3 1 0 0 0 0 0 15 0 1540.8097 E7EVL6;C9JZE3;C9JYJ8;A0A090N8Z2;A8K9F5;A0A090N8H1;Q9BWE0 E7EVL6 19 33 REPIN1 Replication initiator 1 yes no 2 0.00042371 56.094 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1654 210 1790 2684 4387;4388 4387 289 0 LLSSESEDEEEFIPLAQR VPEIAETVTQTQPVRLLSSESEDEEEFIPL SESEDEEEFIPLAQRLT_____________ R L L Q R L 1 1 0 1 0 1 5 0 0 1 3 0 0 1 1 3 0 0 0 0 0 0 18 0 2091.0008 D6RIT8;F8W714;Q96AY2 D6RIT8 82 99 EME1 Crossover junction endonuclease EME1 yes no 2 3.3027E-14 95.9 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1655 600 1791 2685;2686;2687 4389;4390;4391;4392;4393 4389 894;895;896 0 LLTGIKSPR LLPQPEVLSPTVKGKLLTGIKSPRSYTPKP PTVKGKLLTGIKSPRSYTPKPNPVIREEDK K L L P R S 0 1 0 0 0 0 0 1 0 1 2 1 0 0 1 1 1 0 0 0 0 0 9 1 983.61277 B9EGR5;Q8IWI9;Q9H6M4 B9EGR5 1202 1210 MGA MAX gene-associated protein yes no 2 0.016965 41.399 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1656 555 1792 2688 4394 4394 831 0 LLVDVDESTLSPEEQK NLPFLKPDDIQYFDKLLVDVDESTLSPEEQ LVDVDESTLSPEEQKKKK____________ K L L Q K K 0 0 0 2 0 1 3 0 0 0 3 1 0 0 1 2 1 0 0 2 0 0 16 0 1800.8993 A0JLT9;Q32Q20;A0PJH5;Q7Z497;O75533 A0JLT9 478 493 SF3B1 Splicing factor 3B subunit 1 yes no 2 4.9722E-12 79.771 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1657 296 1793 2689;2690 4395;4396 4395 441 0 LLYNRPGTVSSLK FLSKKKTDELRNLHKLLYNRPGTVSSLKKN HKLLYNRPGTVSSLKKNVGQFSGFPFEKGS K L L L K K 0 1 1 0 0 0 0 1 0 0 3 1 0 0 1 2 1 0 1 1 0 0 13 1 1446.8195 P35659;B4DFG0;B4DNW3;D6R9L5;D6RDA2 P35659 112 124 DEK Protein DEK yes no 3 0.004287 43.382 1 0.57857 0.83409 NaN 1 Median NaN NaN NaN 0 0 Median 0.57857 0.83409 NaN 1 0 Median 17795000 10576000 7219100 0 0 0 17795000 10576000 7219100 1658 754 1794 2691 4397;4398 4398 2 LLYNRPGTVSSLKK FLSKKKTDELRNLHKLLYNRPGTVSSLKKN KLLYNRPGTVSSLKKNVGQFSGFPFEKGSV K L L K K N 0 1 1 0 0 0 0 1 0 0 3 2 0 0 1 2 1 0 1 1 0 0 14 2 1574.9144 P35659;B4DFG0;B4DNW3;D6R9L5;D6RDA2 P35659 112 125 DEK Protein DEK yes no 3 0.0031642 34.432 1 0.44417 0.62851 NaN 1 Median NaN NaN NaN 0 0 Median 0.44417 0.62851 NaN 1 0 Median 13050000 8163700 4886700 0 0 0 13050000 8163700 4886700 1659 754 1795 2692 4399;4400 4399 2 LMELHGEGSSSGK RKVKMLKKPKFELGKLMELHGEGSSSGKAT GKLMELHGEGSSSGKATGDETGAKVERADG K L M G K A 0 0 0 0 0 0 2 3 1 0 2 1 1 0 0 3 0 0 0 0 0 0 13 0 1330.6187 D6R9B6;H0Y9Y4;D6RAT0;Q6NXR8;P61247;D6RG13;A8K4W0 D6R9B6 109 121 RPS3A 40S ribosomal protein S3a yes no 3 1.3782E-05 69.92 1 0.55836 0.70247 NaN 1 Median NaN NaN NaN 0 0 Median 0.55836 0.70247 NaN 1 0 Median 59915000 38236000 21679000 0 0 0 59915000 38236000 21679000 1660 594 1796 2693 4401;4402 4402 122 2 LNASPAAREEATSPGAK AGSSPAQGAQNEPPRLNASPAAREEATSPG ASPAAREEATSPGAKDMPLSSDGNPKVNEK R L N A K D 5 1 1 0 0 0 2 1 0 0 1 1 0 0 2 2 1 0 0 0 0 0 17 1 1668.8431 W5ZR30;Q9UGU0 W5ZR30 571 587 TCF20 Transcription factor 20 yes no 3 0.00035812 42.64 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1661 949 1797 2694 4403 4403 1689;2052 0 LNDLEDALQQAK AEQRGENALKDAKNKLNDLEDALQQAKEDL KNKLNDLEDALQQAKEDLARLLRDYQELMN K L N A K E 2 0 1 2 0 2 1 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 12 0 1356.6885 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;H6VRG2;H6VRF9;CON__P04264 H6VRG3 444 455 KRT1 Keratin, type II cytoskeletal 1 yes no 2 3.056E-41 140.49 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 4589000 4589000 0 4589000 4589000 0 0 0 0 + 1662 670 1798 2695 4404;4405 4404 2 LNISFPATGCQK ______________________________ ______________________________ K L N Q K L 1 0 1 0 1 1 0 1 0 1 1 1 0 1 1 1 1 0 0 0 0 0 12 0 1334.6653 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 3 14 RPS6 40S ribosomal protein S6 yes no 2 0.0075611 43.308 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1498700 0 1498700 1498700 0 1498700 0 0 0 1663 303 1799 2696 4406 4406 1 LNQDVLLVNESK KDFSGVSDADNSSMKLNQDVLLVNESKKGI SMKLNQDVLLVNESKKGILDEDNEKEKRDS K L N S K K 0 0 2 1 0 1 1 0 0 0 3 1 0 0 0 1 0 0 0 2 0 0 12 0 1370.7405 B3KNC8;Q9UPZ3 B3KNC8 17 28 HPS5 Hermansky-Pudlak syndrome 5 protein yes no 2 0.00010089 78.692 2 4 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1664 431 1800 2697;2698;2699;2700;2701;2702 4407;4408;4409;4410;4411;4412;4413;4414;4415 4408 636 0 LNQSPSLAPVK GKTQNGQDKTNAPSRLNQSPSLAPVKRTYE APSRLNQSPSLAPVKRTYEQMEFPLLKKRK R L N V K R 1 0 1 0 0 1 0 0 0 0 2 1 0 0 2 2 0 0 0 1 0 0 11 0 1152.6503 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 706 716 ADNP Activity-dependent neuroprotector homeobox protein yes no 2 2.7727E-139 175.54 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1665 413 1801 2703;2704 4416;4417;4418;4419;4420;4421;4422 4418 607 0 LNSGGGLSEELGSAR HSLGKVTSDLAKRRKLNSGGGLSEELGSAR LNSGGGLSEELGSARRSGEVTLTKGDPGSL K L N A R R 1 1 1 0 0 0 2 4 0 0 3 0 0 0 0 3 0 0 0 0 0 0 15 0 1445.711 A0A0G2JIS2;A0A024RCN9;B7Z852;A2ABF8;A0A0G2JIR1;A2ABF9;A0A0G2JK64;Q96KQ7;Q59FM7 A0A0G2JIS2 230 244 EHMT2 Histone-lysine N-methyltransferase EHMT2 yes no 2 0.00013396 52.453 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1666 160 1802 2705 4423 4423 220 0 LNSSDPSLIGLK ANALTKYMRDPTFVRLNSSDPSLIGLKQYY FVRLNSSDPSLIGLKQYYKVVNSYPLAHKV R L N L K Q 0 0 1 1 0 0 0 1 0 1 3 1 0 0 1 3 0 0 0 0 0 0 12 0 1242.682 Q8TDR3;Q8NEH0;Q8IYV2;Q9UHI6 Q8TDR3 266 277 DDX20 Probable ATP-dependent RNA helicase DDX20 yes no 2 0.0077598 56.951 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1667 877 1803 2706 4424 4424 1471 0 LNYLDPR TDREENKQIALGTSKLNYLDPRITVAWCKK QIALGTSKLNYLDPRITVAWCKKWGVPIEK K L N P R I 0 1 1 1 0 0 0 0 0 0 2 0 0 0 1 0 0 0 1 0 0 0 7 0 889.46577 P11387;B9EG90;Q9BVT2;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;B4E061;Q8TBP3;H0YAR3 P11387 721 727 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial yes no 2 0.006911 52.403 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1668 733 1804 2707 4425 4425 2071 0 LPDLSPVENK QRQKQPRAGPIKAQKLPDLSPVENKEHKPG IKAQKLPDLSPVENKEHKPGPIGKERSLKN K L P N K E 0 0 1 1 0 0 1 0 0 0 2 1 0 0 2 1 0 0 0 1 0 0 10 0 1110.5921 H7C5N8;E7EPN9;Q9Y520 H7C5N8 649 658 PRRC2C Protein PRRC2C yes no 2 3.4534E-05 91.961 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1669 606 1805 2708;2709 4426;4427;4428;4429 4427 903 0 LPEASQSPLVLK LPINSAAIKAECTARLPEASQSPLVLKQAV TARLPEASQSPLVLKQAVRKPLEAVLRYLE R L P L K Q 1 0 0 0 0 1 1 0 0 0 3 1 0 0 2 2 0 0 0 1 0 0 12 0 1280.734 Q59FW1;H0Y4T7;A0A024R6P5;E7ESY4;Q13330;Q9BRL8;F8W9Y9 Q59FW1 308 319 MTA1 Metastasis-associated protein MTA1 yes no 2 6.3651E-66 145.43 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1670 83 1806 2710;2711 4430;4431;4432;4433 4430 112;113 0 LPIPSPQR EKEAMCLSAPALALKLPIPSPQRAFTLQVS APALALKLPIPSPQRAFTLQVSSDPSMYIE K L P Q R A 0 1 0 0 0 1 0 0 0 1 1 0 0 0 3 1 0 0 0 0 0 0 8 0 906.5287 B7Z830;B4DSW6;A8K194;P54198 B7Z830 192 199 HIRA Protein HIRA yes no 2 0.0068588 54.066 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1671 338 1807 2712 4434 4434 513 0 LPISDSPPDTQEIHVIEQEK EVGVLKESVDLPEEKLPISDSPPDTQEIHV SPPDTQEIHVIEQEKLEAQDSGEEARNLSF K L P E K L 0 0 0 2 0 2 3 0 1 3 1 1 0 0 3 2 1 0 0 1 0 0 20 0 2274.138 Q8WYP5;B3KTD2;B3KVE5;B3KRD0 Q8WYP5 1508 1527 AHCTF1 Protein ELYS yes no 3 0 222.46 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1672 897 1808 2713;2714 4435;4436;4437;4438 4437 1528 0 LPISDSPPDTQEIHVIEQEKLEAQDSGEEAR EVGVLKESVDLPEEKLPISDSPPDTQEIHV EQEKLEAQDSGEEARNLSFNELYPSGTLKL K L P A R N 2 1 0 3 0 3 6 1 1 3 2 1 0 0 3 3 1 0 0 1 0 0 31 1 3459.6642 Q8WYP5;B3KTD2;B3KVE5;B3KRD0 Q8WYP5 1508 1538 AHCTF1 Protein ELYS yes no 4 4.3104E-16 54.011 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1673 897 1809 2715 4439 4439 1523;1528 0 LPPKVESLESLYFTPIPAR GTSVPGEPASPISQRLPPKVESLESLYFTP VESLESLYFTPIPARSQAPLESSLDSLGDV R L P A R S 1 1 0 0 0 0 2 0 0 1 3 1 0 1 4 2 1 0 1 1 0 0 19 1 2156.1881 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q59HB8;Q96HN5;H0YFY6;Q7Z757 A0A087WY61 1747 1765 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 yes no 2 3.4589E-52 113.33 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1674 71 1810 2716 4440 4440 88;89;1787 0 LPQSSSSESSPPSPQPTK ASPTRDRSPPKSPEKLPQSSSSESSPPSPQ SSSSESSPPSPQPTKVSRHASSSPESPKPA K L P T K V 0 0 0 0 0 2 1 0 0 0 1 1 0 0 5 7 1 0 0 0 0 0 18 0 1839.885 A0A140VK53;Q9UQ35;I3L4D8;I3L182;Q9UQ39 A0A140VK53 412 429 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 9.5235E-06 46.663 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1675 284 1811 2717;2718 4441;4442 4441 403;404;405 0 LPSGSGAASPTGSAVDIR SNVDVETQSGKTVIRLPSGSGAASPTGSAV GSGAASPTGSAVDIRAGAISASGPELQGAG R L P I R A 3 1 0 1 0 0 0 3 0 1 1 0 0 0 2 4 1 0 0 1 0 0 18 0 1641.8322 Q09666;B4DTV0 Q09666 208 225 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 2 3.1944E-18 104.88 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1676 804 1812;1813 2719;2720;2721 4443;4444;4445;4446 4443 1317;1318;1319 0 LPSSPVYEDAASFK QTPPVSPAPQPTEERLPSSPVYEDAASFKA RLPSSPVYEDAASFKAELSYRGPVSGTESE R L P F K A 2 0 0 1 0 0 1 0 0 0 1 1 0 1 2 3 0 0 1 1 0 0 14 0 1509.7351 B3KRK4;B4E358;A0A024R5M3;Q53HG7;Q14247;H0YEV2;H0YCD9 B3KRK4 99 112 CTTN Src substrate cortactin yes no 2 2.9006E-07 97.273 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1677 70 1814 2722 4447 4447 84 0 LQAITASSANLRHSPR QRPTKELHGTSIVPKLQAITASSANLRHSP QAITASSANLRHSPRVLVQHCPARTPQRGD K L Q P R V 3 2 1 0 0 1 0 0 1 1 2 0 0 0 1 3 1 0 0 0 0 0 16 1 1720.9333 I3VM54;I3VM53;Q9Y2K7 I3VM54 802 817 KDM2A Lysine-specific demethylase 2A yes no 3 0.0001175 51.487 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1678 677 1815 2723 4448 4448 1004;1005 0 LQDGTPQAALSPLTPAR DRVHKFTSDSPMAARLQDGTPQAALSPLTP DGTPQAALSPLTPARLLGPSLTSTTPASSS R L Q A R L 3 1 0 1 0 2 0 1 0 0 3 0 0 0 3 1 2 0 0 0 0 0 17 0 1734.9264 Q59F18;B3KY54;B3KUD6;B3KY41;B4E229;B4DI56;A0A087WVP4;A0A087X1R1;P53814 Q59F18 285 301 SMTN Smoothelin yes no 2 4.8823E-06 60.474 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1679 188 1816 2724 4449 4449 266 0 LQEELSENDK RSAEELKEMQDKVIKLQEELSENDKKIKAL DKVIKLQEELSENDKKIKALNHEIEELEKR K L Q D K K 0 0 1 1 0 1 3 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 10 0 1203.5619 B7ZLZ7;A0A024R158;O95347;A8K984;Q2KQ72;Q05BV1;Q6IPS5;Q7Z2X1;A0JLM9;Q32Q15;Q5T821;Q05D74 B7ZLZ7 263 272 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 yes no 2 6.0599E-13 109.29 1 0.63731 0.83629 NaN 1 Median NaN NaN NaN 0 0 Median 0.63731 0.83629 NaN 1 0 Median 6493500 4157200 2336200 0 0 0 6493500 4157200 2336200 1680 27 1817 2725 4450;4451 4451 2 LQEELSENDKK RSAEELKEMQDKVIKLQEELSENDKKIKAL KVIKLQEELSENDKKIKALNHEIEELEKRK K L Q K K I 0 0 1 1 0 1 3 0 0 0 2 2 0 0 0 1 0 0 0 0 0 0 11 1 1331.6569 B7ZLZ7;A0A024R158;O95347;A8K984;Q2KQ72;Q05BV1;Q6IPS5;Q7Z2X1;A0JLM9;Q32Q15;Q5T821;Q05D74 B7ZLZ7 263 273 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 yes no 3 0.026414 17.6 1 0.93388 1.1417 NaN 1 Median NaN NaN NaN 0 0 Median 0.93388 1.1417 NaN 1 0 Median 8651900 4781200 3870700 0 0 0 8651900 4781200 3870700 1681 27 1818 2726 4452 4452 1 LQEKLSPPYSSPQEFAQDVGR DQPGGTLDLTLIRARLQEKLSPPYSSPQEF PPYSSPQEFAQDVGRMFKQFNKLTEDKADV R L Q G R M 1 1 0 1 0 3 2 1 0 0 2 1 0 1 3 3 0 0 1 1 0 0 21 1 2375.1757 B2R8R5;Q13263;M0R0K9 B2R8R5 747 767 TRIM28 Transcription intermediary factor 1-beta yes no 3 4.9293E-60 130.43 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1682 408 1819;1820 2727;2728;2729 4453;4454;4455 4455 603;604 0 LQLEETMPSPYGR GKAIKGKVGKPKVKKLQLEETMPSPYGRRI KKLQLEETMPSPYGRRIIPEITAMKADASK K L Q G R R 0 1 0 0 0 1 2 1 0 0 2 0 1 0 2 1 1 0 1 0 0 0 13 0 1519.7341 Q02880;Q71UH4;Q59H80;B4DLV2;Q8WTY5;B4DKD0;B7ZB27 Q02880 1228 1240 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 2 0.00037971 76.85 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1683 796 1821 2730 4456;4457 4456 190 1276 0 LQLEETMPSPYGRR GKAIKGKVGKPKVKKLQLEETMPSPYGRRI KLQLEETMPSPYGRRIIPEITAMKADASKK K L Q R R I 0 2 0 0 0 1 2 1 0 0 2 0 1 0 2 1 1 0 1 0 0 0 14 1 1675.8352 Q02880;Q71UH4;Q59H80;B4DLV2;Q8WTY5;B4DKD0;B7ZB27 Q02880 1228 1241 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 3 0.00063787 52.862 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1684 796 1822 2731 4458 4458 190 1276 0 LQLLEDDK LGLVDIVKGTNSYYKLQLLEDDKENRYWIF GTNSYYKLQLLEDDKENRYWIFRSWGRVGT K L Q D K E 0 0 0 2 0 1 1 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 8 0 972.51278 A0A024R3T8;P09874;B2R5W3;B4E0E1 A0A024R3T8 572 579 PARP1 Poly [ADP-ribose] polymerase 1 yes no 2 0.002677 66.351 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3471800 3471800 0 0 0 0 3471800 3471800 0 1685 56 1823 2732 4459 4459 1 LQLPGAPSPLEK LTRALWGARSPKRPRLQLPGAPSPLEKASR RPRLQLPGAPSPLEKASRRVLAVVLEDVMA R L Q E K A 1 0 0 0 0 1 1 1 0 0 3 1 0 0 3 1 0 0 0 0 0 0 12 0 1248.7078 H3BQL8;H3BND2;A0A024QZB5;Q9BWN1 H3BQL8 35 46 PRR14;MGC3121 Proline-rich protein 14 yes no 2 0.01101 50.207 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1686 2 1824 2733 4460;4461 4461 6 0 LQLQGLDLSSR KKQTEQLSLELEVARLQLQGLDLSSRSLLG EVARLQLQGLDLSSRSLLGIDTEDAIQGRN R L Q S R S 0 1 0 1 0 2 0 1 0 0 4 0 0 0 0 2 0 0 0 0 0 0 11 0 1228.6776 P49454 P49454 1739 1749 CENPF Centromere protein F yes yes 2 4.6892E-06 98.353 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1687 768 1825 2734;2735 4462;4463;4464 4463 1239;1240 0 LQPSSSPENSLDPFPPR RFQLEELRKFGAQFKLQPSSSPENSLDPFP PSSSPENSLDPFPPRILKEEPKGKEKEVDG K L Q P R I 0 1 1 1 0 1 1 0 0 0 2 0 0 1 5 4 0 0 0 0 0 0 17 0 1866.9112 H3BUF6;Q8WWM7;A0A024QZC0;A0A024QZB7;A0A024QZ91 H3BUF6 560 576 ATXN2L Ataxin-2-like protein yes no 2 3.8678E-05 46.3 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1688 668 1826 2736 4465 4465 994;995;996 0 LQQEQDLRR QANQEISPLDSMIQRLQQEQDLRRSGEAVI DSMIQRLQQEQDLRRSGEAVISNTSRLSRG R L Q R R S 0 2 0 1 0 3 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 9 1 1184.6262 Q8WWQ0 Q8WWQ0 650 658 PHIP PH-interacting protein yes yes 3 2.8391E-06 96.331 1 0.81804 1.4153 NaN 1 Median NaN NaN NaN 0 0 Median 0.81804 1.4153 NaN 1 0 Median 48497000 25041000 23456000 0 0 0 48497000 25041000 23456000 1689 894 1827 2737 4466;4467 4467 2 LQQGAGLESPQGQPEPGAASPQR GSPERPPKTSPGSPRLQQGAGLESPQGQPE SPQGQPEPGAASPQRQQDLHLESPQRQPEY R L Q Q R Q 3 1 0 0 0 5 2 4 0 0 2 0 0 0 4 2 0 0 0 0 0 0 23 0 2302.1302 Q9H6F5;Q6ZW18 Q9H6F5 72 94 CCDC86 Coiled-coil domain-containing protein 86 yes no 2 1.8793E-74 139.77 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1690 927 1828 2738;2739;2740;2741 4468;4469;4470;4471;4472;4473;4474;4475;4476;4477;4478 4472 1621;1622 0 LQQGAGLESPQGQPEPGAASPQRQQDLHLESPQR GSPERPPKTSPGSPRLQQGAGLESPQGQPE SPQRQQDLHLESPQRQPEYSPESPRCQPKP R L Q Q R Q 3 2 0 1 0 8 3 4 1 0 4 0 0 0 5 3 0 0 0 0 0 0 34 1 3633.7884 Q9H6F5 Q9H6F5 72 105 CCDC86 Coiled-coil domain-containing protein 86 yes yes 4 2.8427E-12 40.535 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1691 927 1829 2742 4479 4479 1621;1622;1623 0 LQQLGEAHQAETEVLRR ELEEERAGRKGLEARLQQLGEAHQAETEVL QLGEAHQAETEVLRRELAEAMAAQHTAESE R L Q R R E 2 2 0 0 0 3 3 1 1 0 3 0 0 0 0 0 1 0 0 1 0 0 17 1 1977.0392 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q59HB8;A0A024R5G4;F5H4J1;A8K394 A0A087WY61 771 787 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 yes no 4 7.6298E-09 69.331 1 0.31299 0.53443 NaN 1 Median NaN NaN NaN 0 0 Median 0.31299 0.53443 NaN 1 0 Median 34052000 26402000 7650000 0 0 0 34052000 26402000 7650000 1692 71 1830 2743 4480 4480 1 LQQQAALSPTTAPAVSSVSK AFVKALQQEQEIEQRLQQQAALSPTTAPAV ALSPTTAPAVSSVSKQETIMRHHTLRQAPQ R L Q S K Q 4 0 0 0 0 3 0 0 0 0 2 1 0 0 2 4 2 0 0 2 0 0 20 0 1983.0637 A0A0U1RRM1;B3KSZ4;Q8WXI9;A0A0U1RR30 A0A0U1RRM1 463 482 GATAD2B Transcriptional repressor p66-beta yes no 2 1.7791E-73 140.63 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1693 276 1831 2744;2745 4481;4482;4483;4484;4485;4486 4485 383 0 LQSSQEPEAPPPR SPKARRGKARRRAAKLQSSQEPEAPPPRDV AKLQSSQEPEAPPPRDVALLQGRANDLVKY K L Q P R D 1 1 0 0 0 2 2 0 0 0 1 0 0 0 4 2 0 0 0 0 0 0 13 0 1434.7103 Q5H909;A0A024R9Y7;Q9UNF1;B4DWM5;B4DX55;Q5H907 Q5H909 244 256 MAGED2 Melanoma-associated antigen D2 yes no 2 3.0761E-05 70.165 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1694 123 1832 2746 4487 4487 177 0 LQTLSPALK FSEITSPSKRSQPDKLQTLSPALKAPEKTR RSQPDKLQTLSPALKAPEKTRETGLSYTED K L Q L K A 1 0 0 0 0 1 0 0 0 0 3 1 0 0 1 1 1 0 0 0 0 0 9 0 969.58588 B7Z8H0;Q96F82;A8K794;Q13415 B7Z8H0 283 291 ORC1L;ORC1 Origin recognition complex subunit 1 yes no 2 0.00035595 80.706 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1695 367 1833 2747;2748 4488;4489 4489 565 0 LQTPNTFPK EAAEEAETPQAKKIKLQTPNTFPKRKKGEK QAKKIKLQTPNTFPKRKKGEKRASSPFRRV K L Q P K R 0 0 1 0 0 1 0 0 0 0 1 1 0 1 2 0 2 0 0 0 0 0 9 0 1044.5604 B2RAU8;A0A0A0MRM9;Q14978;Q96J17 B2RAU8 605 613 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 0.00050372 75.739 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1696 214 1834 2749;2750 4490;4491;4492 4490 1814;1815 0 LQVLLNCMTEIYYQFKK AHQEGTHPKDRNVEKLQVLLNCMTEIYYQF VLLNCMTEIYYQFKKDKAERRLAYNEEQIH K L Q K K D 0 0 1 0 1 2 1 0 0 1 3 2 1 1 0 0 1 0 2 1 0 0 17 1 2190.1217 B4E164;Q9UHD2 B4E164 319 335 TBK1 Serine/threonine-protein kinase TBK1 yes no 2 6.7597E-05 45.207 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1697 519 1835 2751 4493 4493 99 1892;2067;2068 0 LRDLEDSLAR QLSQLQKQLAAKEAKLRDLEDSLARERDTS AKEAKLRDLEDSLARERDTSRRLLAEKERE K L R A R E 1 2 0 2 0 0 1 0 0 0 3 0 0 0 0 1 0 0 0 0 0 0 10 1 1186.6306 P02545;W8QEH3;Q5I6Y5;Q8N519;Q3BDU5;Q5TCI8 P02545 320 329 LMNA Prelamin-A/C;Lamin-A/C yes no 2 0.0009697 71.03 1 1.6117 2.7406 NaN 1 Median NaN NaN NaN 0 0 Median 1.6117 2.7406 NaN 1 0 Median 30448000 11161000 19287000 0 0 0 30448000 11161000 19287000 1698 725 1836 2752 4494;4495 4495 2 LRDPAQQVR FPNLVDPWTPHLYARLRDPAQQVRKTAGLV PHLYARLRDPAQQVRKTAGLVMTHLILKDM R L R V R K 1 2 0 1 0 2 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 9 1 1081.5992 Q15021;B4E0B7;B3KY03;B3KMS0 Q15021 1101 1109 NCAPD2 Condensin complex subunit 1 yes no 3 0.017146 37.591 1 0.43787 0.75805 NaN 1 Median NaN NaN NaN 0 0 Median 0.43787 0.75805 NaN 1 0 Median 49322000 33498000 15824000 0 0 0 49322000 33498000 15824000 1699 820 1837 2753 4496;4497 4496 2 LRDYQVR CTRFEDSPSYVKWGKLRDYQVRGLNWLISL PSYVKWGKLRDYQVRGLNWLISLYENGING K L R V R G 0 2 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 7 1 948.51411 B7ZAX9;B4DZC0;O60264;Q4W5G3 B7ZAX9 123 129 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes no 3 0.013147 54.549 1 2.156 3.6768 NaN 1 Median NaN NaN NaN 0 0 Median 2.156 3.6768 NaN 1 0 Median 32908000 9248800 23660000 0 0 0 32908000 9248800 23660000 1700 510 1838 2754 4498;4499 4498 2 LREDLER DGKYSQVLANGLDNKLREDLERLKKIRAHR LANGLDNKLREDLERLKKIRAHRGLRHFWG K L R E R L 0 2 0 1 0 0 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 7 1 929.49304 P62269;J3JS69 P62269 107 113 RPS18 40S ribosomal protein S18 yes no 3 0.014537 56.721 1 1.1615 1.949 NaN 1 Median NaN NaN NaN 0 0 Median 1.1615 1.949 NaN 1 0 Median 21464000 9564800 11899000 0 0 0 21464000 9564800 11899000 1701 787 1839 2755 4500;4501 4501 2 LREQVEER IDCFSEVPTSVFGEKLREQVEERLSFYETG TSVFGEKLREQVEERLSFYETGEIPRKNLD K L R E R L 0 2 0 0 0 1 3 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 8 1 1057.5516 A8K9K6;O00567;A0PJ92;H0Y653;H0YDU4 A8K9K6 397 404 NOP56 Nucleolar protein 56 yes no 3 0.0021401 73.985 1 0.48053 0.85003 NaN 1 Median NaN NaN NaN 0 0 Median 0.48053 0.85003 NaN 1 0 Median 88124000 59500000 28624000 0 0 0 88124000 59500000 28624000 1702 379 1840 2756 4502;4503 4503 2 LREVIEIEDASPTK ERRKRIAEREREREKLREVIEIEDASPTKC KLREVIEIEDASPTKCPITTKLVLDEDEET K L R T K C 1 1 0 1 0 0 3 0 0 2 1 1 0 0 1 1 1 0 0 1 0 0 14 1 1598.8516 A4LAA3;P46100 A4LAA3 1517 1530 ATRX Transcriptional regulator ATRX yes no 2;3 7.4976E-42 133.86 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1703 317 1841 2757;2758 4504;4505;4506;4507 4504 473;1840 0 LRHDLER EEMKAAKEKLKYWQRLRHDLERARLLIELL EKLKYWQRLRHDLERARLLIELLRKREKLK R L R E R A 0 2 0 1 0 0 1 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 7 1 937.50936 Q86X06;A0A024R4V5;Q9Y4Q3;B7Z926;A0A024R4W4;O95696;B4DZ41;B4E3L9;Q59G93;J3KQ61;H0Y7B4;Q8N4T7;F6XDC4;E9PSF3;E9PI60;A0A024RCX0;Q9ULD4;P55201 Q86X06 528 534 BRD1;DKFZp434B094;BRPF3;BRPF1 Bromodomain-containing protein 1;Bromodomain and PHD finger-containing protein 3;Peregrin no no 3 0.014099 57.177 1 0.83321 1.0786 NaN 1 Median 0.83321 1.0786 NaN 1 0 Median NaN NaN NaN 0 0 Median 14930000 7937000 6993400 14930000 7937000 6993400 0 0 0 1704 64;779 1842 2759 4508;4509 4508 2 LRITESEEVVSR IDRVRSLETENAGLRLRITESEEVVSREVS GLRLRITESEEVVSREVSGIKAAYEAELGD R L R S R E 0 2 0 0 0 0 3 0 0 1 1 0 0 0 0 2 1 0 0 2 0 0 12 1 1416.7573 P02545;W8QEH3;Q5I6Y5;Q8N519;Q3BDU5;W5X314 P02545 61 72 LMNA Prelamin-A/C;Lamin-A/C yes no 3 0.00013724 59.898 1 1 1.7703 2.2189 NaN 1 Median NaN NaN NaN 0 0 Median 1.7703 2.2189 NaN 1 0 Median 5135300 3399500 1735800 1971800 1971800 0 3163500 1427700 1735800 1705 725 1843 2760;2761 4510;4511;4512 4510 3 LRLEEDKPAVER VAAAEEERRLRQRNRLRLEEDKPAVERCLE RNRLRLEEDKPAVERCLEELVFGDVENDED R L R E R C 1 2 0 1 0 0 3 0 0 0 2 1 0 0 1 0 0 0 0 1 0 0 12 2 1453.7889 Q9Y5J1;B2RAX6 Q9Y5J1 78 89 UTP18 U3 small nucleolar RNA-associated protein 18 homolog yes no 3;4 0.0054514 38.799 4 0.75689 0.98446 6.9997 4 Median NaN NaN NaN 0 0 Median 0.75689 0.98446 6.9997 4 0 Median 45902000 24729000 21173000 0 0 0 45902000 24729000 21173000 1706 968 1844 2762;2763;2764;2765 4513;4514;4515;4516;4517;4518 4516 5 LRLSPSPTSQR EIHAYRKLLEGEEERLRLSPSPTSQRSRGR EEERLRLSPSPTSQRSRGRASSHSSQTQGG R L R Q R S 0 2 0 0 0 1 0 0 0 0 2 0 0 0 2 3 1 0 0 0 0 0 11 1 1240.6888 P02545;W8QEH3;Q5I6Y5;Q8N519;Q3BDU5;Q5TCI8;A0A0C4DGC5;B4DFR3 P02545 387 397 LMNA Prelamin-A/C;Lamin-A/C yes no 2;3 5.5778E-15 113.53 5 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1707 725 1845;1846 2766;2767;2768;2769;2770 4519;4520;4521;4522;4523;4524;4525;4526;4527;4528;4529 4521 1112;1113;1956 0 LRPISDDSESIEESDTR EIESVKISAKKPGRKLRPISDDSESIEESD PISDDSESIEESDTRRKVKSAEKISTQRHE K L R T R R 0 2 0 3 0 0 3 0 0 2 1 0 0 0 1 4 1 0 0 0 0 0 17 1 1947.9021 D6R9S4;Q09GN1;A5D8X7;Q71F23;A8K8D2 D6R9S4 103 119 CENPU;MLF1IP Centromere protein U yes no 2 9.5061E-07 61.375 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1708 320 1847;1848 2771;2772 4530;4531;4532 4531 481;482;483 0 LRSEIDNVK NSKIEISELNRVIQRLRSEIDNVKKQISNL NRVIQRLRSEIDNVKKQISNLQQSISDAEQ R L R V K K 0 1 1 1 0 0 1 0 0 1 1 1 0 0 0 1 0 0 0 1 0 0 9 1 1072.5877 CON__Q5XQN5;CON__Q922U2;H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;H6VRG2;H6VRF9;CON__P04264 H6VRG3 408 416 KRT1 Keratin, type II cytoskeletal 1 no no 2 1.6564E-28 116.52 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 91679000 91679000 0 0 0 0 91679000 91679000 0 + 1709 670;584 1849 2773 4533 4533 1 LRSEIDNVKK NSKIEISELNRVIQRLRSEIDNVKKQISNL RVIQRLRSEIDNVKKQISNLQQSISDAEQR R L R K K Q 0 1 1 1 0 0 1 0 0 1 1 2 0 0 0 1 0 0 0 1 0 0 10 2 1200.6826 CON__Q5XQN5;CON__Q922U2;H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;H6VRG2;H6VRF9;CON__P04264 H6VRG3 408 417 KRT1 Keratin, type II cytoskeletal 1 no no 3 5.3571E-11 88.596 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 151570000 151570000 0 21015000 21015000 0 130550000 130550000 0 + 1710 670;584 1850 2774;2775 4534;4535 4535 2 LRSPPEALVQGR NVSADQEEQIHPRSRLRSPPEALVQGRYPH RSRLRSPPEALVQGRYPHIKDGEDLKDHST R L R G R Y 1 2 0 0 0 1 1 1 0 0 2 0 0 0 2 1 0 0 0 1 0 0 12 1 1321.7466 B4DN52;Q53GG0;Q9UHB6;F8VRN8 B4DN52 49 60 LIMA1 LIM domain and actin-binding protein 1 yes no 3 0.00012299 87.647 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1711 485 1851 2776 4536;4537;4538 4537 703 0 LRSPRGSPDGSLQTGKPSAPK THLLSDISPPADALKLRSPRGSPDGSLQTG SPDGSLQTGKPSAPKKLKLDVGEAMAPPSH K L R P K K 1 2 0 1 0 1 0 3 0 0 2 2 0 0 4 4 1 0 0 0 0 0 21 3 2135.1447 E7EV54;O15451;A8K548;C9JFV4;B4DR36;Q8IZL8 E7EV54 328 348 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes no 3;4 5.7593E-11 58.722 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1712 359 1852 2777;2778 4539;4540 4540 551;552 0 LRTFYEK ATGCQKLIEVDDERKLRTFYEKRMATEVAA IEVDDERKLRTFYEKRMATEVAADALGEEW K L R E K R 0 1 0 0 0 0 1 0 0 0 1 1 0 1 0 0 1 0 1 0 0 0 7 1 955.51272 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 24 30 RPS6 40S ribosomal protein S6 yes no 2 0.012391 61.582 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 7092000 0 7092000 7092000 0 7092000 0 0 0 1713 303 1853 2779 4541 4541 1 LSAGFDFK SPSAAGGQQKTRKPKLSAGFDFKQLYCKLC QKTRKPKLSAGFDFKQLYCKLCKRQFTSKQ K L S F K Q 1 0 0 1 0 0 0 1 0 0 1 1 0 2 0 1 0 0 0 0 0 0 8 0 883.44397 B7Z4V7;Q2TB10 B7Z4V7 380 387 ZNF800 Zinc finger protein 800 yes no 2 0.019445 41.704 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1714 539 1854 2780 4542 4542 779 0 LSAKPAPPKPEPK GSKVTKQEPTRRSARLSAKPAPPKPEPKPR ARLSAKPAPPKPEPKPRKTSAKKEPGAKIS R L S P K P 2 0 0 0 0 0 1 0 0 0 1 3 0 0 5 1 0 0 0 0 0 0 13 2 1358.7922 A0A087WZE9;Q15651;P05204 P05204 30 42 HMGN3;HMGN2 High mobility group nucleosome-binding domain-containing protein 3;Non-histone chromosomal protein HMG-17 no no 3 0.0093272 29.013 1 0.36942 0.53346 NaN 1 Median NaN NaN NaN 0 0 Median 0.36942 0.53346 NaN 1 0 Median 5260100 3126500 2133600 0 0 0 5260100 3126500 2133600 1715 200;726 1855 2781 4543 4543 1 LSDDFDSPVK NDQQAKIPLKKREIKLSDDFDSPVKGPLCK KREIKLSDDFDSPVKGPLCKSVTPTKEFLK K L S V K G 0 0 0 3 0 0 0 0 0 0 1 1 0 1 1 2 0 0 0 1 0 0 10 0 1121.5241 Q96T23;H0YER1;H0YCN2 Q96T23 391 400 RSF1 Remodeling and spacing factor 1 yes no 2 1.8443E-79 152.55 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1716 910 1856 2782;2783 4544;4545;4546;4547;4548;4549;4550 4550 1564;1565 0 LSETEDSVIIIDSSPTALK LRRSSRHQTLPERKKLSETEDSVIIIDSSP EDSVIIIDSSPTALKHPEKNQKKLQCLNDV K L S L K H 1 0 0 2 0 0 2 0 0 3 2 1 0 0 1 4 2 0 0 1 0 0 19 0 2017.0467 A0A075B754;Q96QE3;H0UIC2 A0A075B754 743 761 ATAD5 ATPase family AAA domain-containing protein 5 yes no 2 3.5274E-32 119.68 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1717 177 1857 2784 4551 4551 242;243 0 LSFYETGEIPRK TSVFGEKLREQVEERLSFYETGEIPRKNLD EERLSFYETGEIPRKNLDVMKEAMVQAEEA R L S R K N 0 1 0 0 0 0 2 1 0 1 1 1 0 1 1 1 1 0 1 0 0 0 12 1 1438.7456 A8K9K6;O00567;A0PJ92;H0Y653;H0YDU4 A8K9K6 405 416 NOP56 Nucleolar protein 56 yes no 3 0.0011358 46.88 1 0.51451 0.81424 NaN 1 Median NaN NaN NaN 0 0 Median 0.51451 0.81424 NaN 1 0 Median 125790000 84949000 40846000 0 0 0 125790000 84949000 40846000 1718 379 1858 2785 4552;4553 4552 2 LSHLHGK TLYQLMESRVKTFQKLSHLHGKLILLITQV SRVKTFQKLSHLHGKLILLITQVTASEKTK K L S G K L 0 0 0 0 0 0 0 1 2 0 2 1 0 0 0 1 0 0 0 0 0 0 7 0 790.44497 Q15061;Q8TB67 Q15061 565 571 WDR43 WD repeat-containing protein 43 yes no 2 0.0014356 66.993 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 5140900 5140900 0 0 0 0 5140900 5140900 0 1719 821 1859 2786 4554 4554 1 LSIVPVRR KEVATAIRGAIILAKLSIVPVRRGYWGNKI GAIILAKLSIVPVRRGYWGNKIGKPHTVPC K L S R R G 0 2 0 0 0 0 0 0 0 1 1 0 0 0 1 1 0 0 0 2 0 0 8 1 938.60253 H0YEN5;Q8J014;Q8N5L9;Q3KQT6;P15880;I3L404;A4D0Y7;E9PPT0;Q8NI61;E9PM36;E9PMM9;Q6IPX5 H0YEN5 62 69 RPS2;rps2;LOC392781;OK/KNS-cl.7 40S ribosomal protein S2 yes no 3 0.013982 30.075 1 0.38523 0.54774 NaN 1 Median NaN NaN NaN 0 0 Median 0.38523 0.54774 NaN 1 0 Median 7773700 5476800 2296900 0 0 0 7773700 5476800 2296900 1720 654 1860 2787 4555;4556 4556 2 LSLEIEK LPNAMEAKVALELHKLSLEIEKLEQEKRKK KVALELHKLSLEIEKLEQEKRKKLQYQYAS K L S E K L 0 0 0 0 0 0 2 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 7 0 830.47493 CON__ENSEMBL:ENSBTAP00000034412 CON__ENSEMBL:ENSBTAP00000034412 178 184 yes yes 2 0.004218 57.811 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2585400 0 2585400 0 0 0 2585400 0 2585400 + 1721 568 1861 2788 4557 4557 1 LSLFPASPR FQLWKKKRGVLTSDRLSLFPASPRARPKEL VLTSDRLSLFPASPRARPKELRFHSILKVD R L S P R A 1 1 0 0 0 0 0 0 0 0 2 0 0 1 2 2 0 0 0 0 0 0 9 0 986.55492 Q53GA4 Q53GA4 36 44 PHLDA2 Pleckstrin homology-like domain family A member 2 yes yes 2 0.0059004 65.5 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1722 835 1862 2789 4558 4558 1383 0 LSLLSSTSK GVVNPNEVFCSVPGRLSLLSSTSKYKVTVA CSVPGRLSLLSSTSKYKVTVAEVQRRLSPP R L S S K Y 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 4 1 0 0 0 0 0 9 0 934.53351 C9JXZ2;H7C5E5;C1K3N0;Q96SH1;A8K557;B2RAN6;P05549;Q6VUC0;Q92754;Q7Z6R9;Q92481 C9JXZ2 75 83 TFAP2A;TFAP2E;TFAP2C;TFAP2D;TFAP2B Transcription factor AP-2-alpha;Transcription factor AP-2-epsilon;Transcription factor AP-2 gamma;Transcription factor AP-2-delta;Transcription factor AP-2-beta yes no 2 3.0233E-28 124.1 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1723 360 1863 2790;2791 4559;4560;4561;4562 4560 553;554;1854 0 LSPGSYPTVIQQQNATSQR GTTRPGPPPVSQGQRLSPGSYPTVIQQQNA SYPTVIQQQNATSQRAAKNGPPVSDQKEVL R L S Q R A 1 1 1 0 0 4 0 1 0 1 1 0 0 0 2 3 2 0 1 1 0 0 19 0 2074.0443 B5B2P4;C3UMV3;C3UMV2;Q13469 B5B2P4 636 654 NFATC2 Nuclear factor of activated T-cells, cytoplasmic 2 yes no 2 1.9352E-06 48.053 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1724 526 1864 2792 4563 4563 761 0 LSPPYSSPQEFAQDVGR GTLDLTLIRARLQEKLSPPYSSPQEFAQDV PPYSSPQEFAQDVGRMFKQFNKLTEDKADV K L S G R M 1 1 0 1 0 2 1 1 0 0 1 0 0 1 3 3 0 0 1 1 0 0 17 0 1876.8955 B2R8R5;Q13263;M0R0K9 B2R8R5 751 767 TRIM28 Transcription intermediary factor 1-beta yes no 2 4.8187E-08 76.85 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1725 408 1865 2793 4564;4565 4565 603;604 0 LSPSASPPR KPPKRTSSPPRKTRRLSPSASPPRRRHRPS PRKTRRLSPSASPPRRRHRPSPPATPPPKT R L S P R R 1 1 0 0 0 0 0 0 0 0 1 0 0 0 3 3 0 0 0 0 0 0 9 0 910.48723 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3;M0R088;E9PCT1 A0A0S2Z4W1 388 396 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.0040265 49.934 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1726 266 1866 2794;2795 4566;4567 4567 362;363;364 0 LSQSSQDSSPVRNLQSFGTEEPAYSTR GTSRRSARVTRSSARLSQSSQDSSPVRNLQ NLQSFGTEEPAYSTRRVTRSQQQPTPVTPK R L S T R R 1 2 1 1 0 3 2 1 0 0 2 0 0 1 2 7 2 0 1 1 0 0 27 1 2970.3955 O95251 O95251 49 75 KAT7 Histone acetyltransferase KAT7 yes yes 3 1.4299E-09 44.931 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1727 718 1867 2796 4568 4568 1091;1092 0 LSSLWWAPLSR L S S R 1 1 0 0 0 0 0 0 0 0 3 0 0 0 1 3 0 2 0 0 0 0 11 0 1314.7085 REV__B4E073 yes yes 2 0.0029316 56.359 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 + 1728 982 1868 2797;2798 4569;4570 4569 1768 0 LSSPATLNSR NFNGNTLDNDIMLIKLSSPATLNSRVATVS IMLIKLSSPATLNSRVATVSLPRSCAAAGT K L S S R V 1 1 1 0 0 0 0 0 0 0 2 0 0 0 1 3 1 0 0 0 0 0 10 0 1044.5564 CON__P00761 CON__P00761 98 107 yes yes 2 0.01901 45.161 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1985000 1985000 0 1985000 1985000 0 0 0 0 + 1729 569 1869 2799 4571 4571 1 LSSPRGGMKK GKRFKEANNFLWPFKLSSPRGGMKKKTTHF LWPFKLSSPRGGMKKKTTHFVEGGDAGNRE K L S K K K 0 1 0 0 0 0 0 2 0 0 1 2 1 0 1 2 0 0 0 0 0 0 10 2 1059.5859 A8MUD9;A0A024R814;P18124;O95036 A8MUD9 173 182 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 yes no 2 0.0085954 54.549 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2488100 0 2488100 2488100 0 2488100 0 0 0 1730 99 1870 2800 4572 4572 20 1 LSSPVLHR DAGAIGQRLSNGLARLSSPVLHRLRLREDE LSNGLARLSSPVLHRLRLREDENAEPVGTT R L S H R L 0 1 0 0 0 0 0 0 1 0 2 0 0 0 1 2 0 0 0 1 0 0 8 0 907.52395 B3KSQ7;Q16643;D6R9W4;D6RCR4 B3KSQ7 90 97 DBN1 Drebrin yes no 2 0.0027422 65.224 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1731 444 1871 2801;2802;2803 4573;4574;4575 4573 647 0 LSSSFSSR RGRPQVRLPVKTRGKLSSSFSSRGQQQEPG PVKTRGKLSSSFSSRGQQQEPGRYPSRSQQ K L S S R G 0 1 0 0 0 0 0 0 0 0 1 0 0 1 0 5 0 0 0 0 0 0 8 0 869.4243 D3DS96;Q9NRL2;B3KND8;Q59G54 D3DS96 1277 1284 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes no 2 0.017408 57.177 1 1.5003 1.9834 NaN 1 Median NaN NaN NaN 0 0 Median 1.5003 1.9834 NaN 1 0 Median 6132100 2803400 3328700 0 0 0 6132100 2803400 3328700 1732 591 1872 2804 4576 4576 1 LSTPSTGGSVDIISVK CAKSTVTTTTTTVTKLSTPSTGGSVDIISV STPSTGGSVDIISVKEQSKTVVTTTVTDSL K L S V K E 0 0 0 1 0 0 0 2 0 2 1 1 0 0 1 4 2 0 0 2 0 0 16 0 1559.8407 F5GXF5;E7ETD6;Q12830 F5GXF5 1698 1713 BPTF Nucleosome-remodeling factor subunit BPTF yes no 2 0.003784 46.892 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1733 607 1873 2805 4577 4577 1919 0 LSVDYGKK GGGTGSGFTSLLMERLSVDYGKKSKLEFSI TSLLMERLSVDYGKKSKLEFSIYPAPQVST R L S K K S 0 0 0 1 0 0 0 1 0 0 1 2 0 0 0 1 0 0 1 1 0 0 8 1 908.49673 B3KT06;B3KPS3;Q1ZYQ1;A8JZY9;Q13748;Q71U36;P68363;C9JDS9;F8VQQ4;B4DDU2;Q9UQM3;B4DQK4;Q53GA7;F5H5D3;B7Z1K5;P68366;Q9BQE3;C9JEV8;D3DX41;C9JQ00;C9JJQ8 B3KT06 122 129 TUBA2;TUBA3C;TUBA1A;TUBA1B;TUBA4A;TUBA1C;MGC16703 Tubulin alpha-3C/D chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1C chain yes no 2 0.0080505 66.429 1 3.9627 4.9073 NaN 1 Median NaN NaN NaN 0 0 Median 3.9627 4.9073 NaN 1 0 Median 19376000 3999200 15377000 0 0 0 19376000 3999200 15377000 1734 334 1874 2806 4578 4578 1 LSVLIHNSDEHK LFVFGYRAQKIRSKKLSVLIHNSDEHKDIQ SKKLSVLIHNSDEHKDIQSCTVEVHFQKII K L S H K D 0 0 1 1 0 0 1 0 2 1 2 1 0 0 0 2 0 0 0 1 0 0 12 0 1390.7205 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9JVD8;C9J578;C9J9E4;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3 142 153 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 3 0.00028102 83.137 1 1 0.6356 0.79812 12.758 2 Median 0.69838 0.87347 NaN 1 0 Median 0.57846 0.72927 NaN 1 0 Median 117290000 72259000 45029000 16651000 8136700 8513800 100640000 64122000 36516000 1735 941 1875 2807;2808 4579;4580;4581 4581 3 LSVLLCANADGSEK GLCGGDGRPRQATQRLSVLLCANADGSEKL RLSVLLCANADGSEKLPPLVAGKSAKPRAG R L S E K L 2 0 1 1 1 0 1 1 0 0 3 1 0 0 0 2 0 0 0 1 0 0 14 0 1475.729 P07199 P07199 225 238 CENPB Major centromere autoantigen B yes yes 2 0.001297 57.136 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1736 728 1876 2809 4582 4582 1123 0 LSVPTSDEEDEVPAPK DDDGEEKELMERLKKLSVPTSDEEDEVPAP SVPTSDEEDEVPAPKPRGGKKTKGGNVFAA K L S P K P 1 0 0 2 0 0 3 0 0 0 1 1 0 0 3 2 1 0 0 2 0 0 16 0 1711.8152 Q5STZ8;B4DNU2;Q2L6I2;Q8NE71;F5GYK6;A0PJ72 Q5STZ8 105 120 ABCF1 ATP-binding cassette sub-family F member 1 yes no 2 1.9533E-05 63.681 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1737 488 1877 2810;2811 4583;4584 4584 717;718;1883 0 LSVPTSDEEDEVPAPKPR DDDGEEKELMERLKKLSVPTSDEEDEVPAP PTSDEEDEVPAPKPRGGKKTKGGNVFAALI K L S P R G 1 1 0 2 0 0 3 0 0 0 1 1 0 0 4 2 1 0 0 2 0 0 18 1 1964.9691 Q5STZ8;B4DNU2;Q2L6I2;Q8NE71;F5GYK6;A0PJ72 Q5STZ8 105 122 ABCF1 ATP-binding cassette sub-family F member 1 yes no 2;3 7.1296E-11 78.987 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1738 488 1878 2812;2813 4585;4586 4586 717;718;1883 0 LSVQSNPSPQLR EEEVKASQLSVQQNKLSVQSNPSPQLRSVM QNKLSVQSNPSPQLRSVMKVESSENVPSPT K L S L R S 0 1 1 0 0 2 0 0 0 0 2 0 0 0 2 3 0 0 0 1 0 0 12 0 1324.7099 B4DLG2;O75152;Q0D2N5;E9PBY7;E9PQ61;B4DYM8 B4DLG2 71 82 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 2 0.00019687 89.231 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1739 479 1879 2814 4587;4588 4588 693 0 LTEGCSFR GCSTVLCQPTGGKARLTEGCSFRRKQH___ PTGGKARLTEGCSFRRKQH___________ R L T F R R 0 1 0 0 1 0 1 1 0 0 1 0 0 1 0 1 1 0 0 0 0 0 8 0 968.43857 P42677;C9J1C5;A4D1G5;H0YMV8;Q71UM5 P42677 73 80 RPS27;RPS27L;LOC392748 40S ribosomal protein S27;40S ribosomal protein S27-like no no 2 3.2945E-05 98.299 1 0.46894 0.61047 NaN 1 Median NaN NaN NaN 0 0 Median 0.46894 0.61047 NaN 1 0 Median 23307000 16097000 7210900 0 0 0 23307000 16097000 7210900 1740 758;660 1880 2815 4589 4589 1 LTFDSSFSPNTGK GTEITVEDQLARGLKLTFDSSFSPNTGKKN LKLTFDSSFSPNTGKKNAKIKTGYKREHIN K L T G K K 0 0 1 1 0 0 0 1 0 0 1 1 0 2 1 3 2 0 0 0 0 0 13 0 1399.662 C9JI87;A0A1L1UHR1;P21796 C9JI87 97 109 VDAC1 Voltage-dependent anion-selective channel protein 1 yes no 2 2.1449E-06 94.09 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1741 290 1881 2816;2817 4590;4591;4592;4593;4594;4595 4595 435 0 LTFDSSFSPNTGKK GTEITVEDQLARGLKLTFDSSFSPNTGKKN KLTFDSSFSPNTGKKNAKIKTGYKREHINL K L T K K N 0 0 1 1 0 0 0 1 0 0 1 2 0 2 1 3 2 0 0 0 0 0 14 1 1527.7569 C9JI87;A0A1L1UHR1;P21796 C9JI87 97 110 VDAC1 Voltage-dependent anion-selective channel protein 1 yes no 2 9.5318E-08 98.281 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1742 290 1882 2818 4596;4597 4597 435 0 LTFDTTFSPNTGK GTEIAIEDQICQGLKLTFDTTFSPNTGKKS LKLTFDTTFSPNTGKKSGKIKSSYKRECIN K L T G K K 0 0 1 1 0 0 0 1 0 0 1 1 0 2 1 1 4 0 0 0 0 0 13 0 1427.6933 Q5JSD2;Q5JSD1;A0A0A0MR02;A0A024QZT0;A0A024QZN9;P45880;B4DKM5 Q5JSD2 108 120 VDAC2 Voltage-dependent anion-selective channel protein 2 yes no 2 4.5823E-248 207.97 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1743 7 1883 2819;2820 4598;4599;4600 4599 10 0 LTFDTTFSPNTGKK GTEIAIEDQICQGLKLTFDTTFSPNTGKKS KLTFDTTFSPNTGKKSGKIKSSYKRECINL K L T K K S 0 0 1 1 0 0 0 1 0 0 1 2 0 2 1 1 4 0 0 0 0 0 14 1 1555.7882 Q5JSD2;Q5JSD1;A0A0A0MR02;A0A024QZT0;A0A024QZN9;P45880;B4DKM5 Q5JSD2 108 121 VDAC2 Voltage-dependent anion-selective channel protein 2 yes no 2;3 0.00081124 55.66 2 2.395 2.8905 NaN 1 Median NaN NaN NaN 0 0 Median 2.395 2.8905 NaN 1 0 Median 6331700 1548000 4783700 0 0 0 6331700 1548000 4783700 1744 7 1884;1885 2821;2822 4601;4602 4601 10 1 LTGVFAPRPSTGPHK ______________________________ LTGVFAPRPSTGPHKLRECLPLIIFLRNRL K L T H K L 1 1 0 0 0 0 0 2 1 0 1 1 0 1 3 1 2 0 0 1 0 0 15 1 1563.8522 Q96IR1;B2R491;P62701;C9JEH7;A4FU11;Q496E4;Q8TD47;P22090;Q53HI6;B7Z1M6 Q96IR1 3 17 RPS4X;RPS4Y1;RPS4Y2 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 yes no 3;4 4.1099E-06 64.675 3 0.38078 0.5782 NaN 1 Median NaN NaN NaN 0 0 Median 0.38078 0.5782 NaN 1 0 Median 47296000 39612000 7684400 0 0 0 47296000 39612000 7684400 1745 396 1886 2823;2824;2825 4603;4604;4605 4604 3 LTIAEERDK GNKPWISLPRGKGIRLTIAEERDKRLAAKQ RGKGIRLTIAEERDKRLAAKQSSG______ R L T D K R 1 1 0 1 0 0 2 0 0 1 1 1 0 0 0 0 1 0 0 0 0 0 9 1 1073.5717 Q96IR1;B2R491;P62701;Q53HV1;Q8TD47 Q96IR1 226 234 RPS4X;RPS4Y2 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2 yes no 2 1.3156E-12 113.26 1 0.41227 0.60996 NaN 1 Median NaN NaN NaN 0 0 Median 0.41227 0.60996 NaN 1 0 Median 22123000 15279000 6843600 0 0 0 22123000 15279000 6843600 1746 396 1887 2826 4606 4606 1 LTLLQVASR QNQQLLRENEIIKQKLTLLQVASRQKHLPK EIIKQKLTLLQVASRQKHLPKDTLLSPDSS K L T S R Q 1 1 0 0 0 1 0 0 0 0 3 0 0 0 0 1 1 0 0 1 0 0 9 0 999.60768 Q59HG1;O95239;B3KNC0 Q59HG1 997 1005 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A yes no 2 0.00038252 70.942 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1747 717 1888 2827;2828 4607;4608;4609 4607 1087 0 LTLPHSIR MVVLWKIPSKELRVRLTLPHSIRSDSEDIC SKELRVRLTLPHSIRSDSEDICLFTKDEPN R L T I R S 0 1 0 0 0 0 0 0 1 1 2 0 0 0 1 1 1 0 0 0 0 0 8 0 935.55525 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L234;I3L3C4 O76021 82 89 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 2;3 0.0064258 87.323 2 0.35389 0.47576 2.0065 2 Median NaN NaN NaN 0 0 Median 0.35389 0.47576 2.0065 2 0 Median 96831000 72140000 24691000 0 0 0 96831000 72140000 24691000 1748 712 1889 2829;2830 4610;4611;4612;4613 4612 4 LTPEEEEILNK ESHYALPLGRKKGAKLTPEEEEILNKKRSK KGAKLTPEEEEILNKKRSKKIQKKYDERKK K L T N K K 0 0 1 0 0 0 4 0 0 1 2 1 0 0 1 0 1 0 0 0 0 0 11 0 1313.6715 Q5JR95;Q5JR94;P62241;Q9BS10 Q5JR95 109 119 RPS8 40S ribosomal protein S8 yes no 2 0.0066095 63.283 1 2 0.52574 0.65042 108.1 2 Median 1.1598 1.3969 NaN 1 0 Median 0.23833 0.30284 NaN 1 0 Median 24630000 18966000 5664200 6300300 2550100 3750200 18330000 16416000 1914000 1749 785 1890 2831;2832;2833 4614;4615;4616;4617 4617 4 LTPSPDIIVLSDNEASSPR PVDMSARRSEPERGRLTPSPDIIVLSDNEA PDIIVLSDNEASSPRSSSRMEERLKAANLE R L T P R S 1 1 1 2 0 0 1 0 0 2 2 0 0 0 3 4 1 0 0 1 0 0 19 0 2010.0269 A0A0U1RRM1;B3KSZ4;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 119 137 GATAD2B Transcriptional repressor p66-beta yes no 2 4.4335E-24 109.5 3 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1750 276 1891;1892 2834;2835;2836;2837;2838 4618;4619;4620;4621;4622;4623;4624;4625;4626 4618 384;385;386;387 0 LTPVSLSNSPIK KSKTTAKVTKELYVKLTPVSLSNSPIKGAD YVKLTPVSLSNSPIKGADCQEVPQDKDGYK K L T I K G 0 0 1 0 0 0 0 0 0 1 2 1 0 0 2 3 1 0 0 1 0 0 12 0 1254.7184 A4LAA3;P46100 A4LAA3 590 601 ATRX Transcriptional regulator ATRX yes no 2 5.0839E-40 132.31 5 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1751 317 1893;1894;1895 2839;2840;2841;2842;2843;2844;2845;2846 4627;4628;4629;4630;4631;4632;4633;4634;4635;4636;4637;4638 4631 469;470;471;1839 0 LTPVSPESSSTEEK IEVDIDVEHGGKRSRLTPVSPESSSTEEKS RLTPVSPESSSTEEKSSSQPSSCCSDPSKP R L T E K S 0 0 0 0 0 0 3 0 0 0 1 1 0 0 2 4 2 0 0 1 0 0 14 0 1489.7148 E7EMC7;Q13501;B4E3V2 E7EMC7 268 281 SQSTM1 Sequestosome-1 yes no 2 2.0555E-11 106.14 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1752 605 1896 2847 4639 4639 901;1917 0 LTQEETNFK QTEQELKEKEKELQKLTQEETNFKSLVHDL EKELQKLTQEETNFKSLVHDLFQKVEEAKS K L T F K S 0 0 1 0 0 1 2 0 0 0 1 1 0 1 0 0 2 0 0 0 0 0 9 0 1108.5401 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 565 573 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 2 0.0010697 79.906 1 0.64253 0.84717 NaN 1 Median NaN NaN NaN 0 0 Median 0.64253 0.84717 NaN 1 0 Median 14576000 8877900 5697900 0 0 0 14576000 8877900 5697900 1753 941 1897 2848 4640;4641 4641 2 LTQTSGETTHTDKEPVGEGK AQKVEVKEELLAVGKLTQTSGETTHTDKEP GETTHTDKEPVGEGKGTKAFKQPAKRKLDA K L T G K G 0 0 0 1 0 1 3 3 1 0 1 2 0 0 1 1 5 0 0 1 0 0 20 1 2114.0128 P46013 P46013 2861 2880 MKI67 Antigen KI-67 yes yes 3;4 1.4491E-16 84.499 2 2 0.91192 1.0967 3.514 4 Median 0.92802 1.1323 3.9599 2 0 Median 0.91192 1.0829 1.2198 2 0 Median 353160000 175250000 177910000 83976000 40075000 43901000 269180000 135170000 134010000 1754 762 1898 2849;2850;2851;2852 4642;4643;4644;4645;4646 4646 5 LTQTSGETTHTDKVPGGEDK LEKRDVQKELSALKKLTQTSGETTHTDKVP GETTHTDKVPGGEDKSINAFRETAKQKLDP K L T D K S 0 0 0 2 0 1 2 3 1 0 1 2 0 0 1 1 5 0 0 1 0 0 20 1 2099.9971 P46013 P46013 1410 1429 MKI67 Antigen KI-67 yes yes 4 0.0079384 16.506 1 0.92465 1.127 NaN 1 Median NaN NaN NaN 0 0 Median 0.92465 1.127 NaN 1 0 Median 30898000 15609000 15289000 0 0 0 30898000 15609000 15289000 1755 762 1899 2853 4647 4647 1 LTQTSGETTHTHTEPTGDGK LGKVGVKEELLAVGKLTQTSGETTHTHTEP GETTHTHTEPTGDGKSMKAFMESPKQILDS K L T G K S 0 0 0 1 0 1 2 3 2 0 1 1 0 0 1 1 7 0 0 0 0 0 20 0 2096.9611 P46013 P46013 1652 1671 MKI67 Antigen KI-67 yes yes 3;4 1.2103E-11 62.362 1 3 1.1016 1.3824 39.31 4 Median 0.58544 0.69331 NaN 1 0 Median 1.2337 1.541 14.799 3 0 Median 165080000 78242000 86834000 7435300 3752700 3682600 157640000 74490000 83151000 1756 762 1900 2854;2855;2856;2857 4648;4649;4650;4651;4652;4653 4650 5 LTQTSGQSTHTHKEPASGDEGIK RPRKEVKEELSAVERLTQTSGQSTHTHKEP THTHKEPASGDEGIKVLKQRAKKKPNPVEE R L T I K V 1 0 0 1 0 2 2 3 2 1 1 2 0 0 1 3 4 0 0 0 0 0 23 1 2408.1568 P46013 P46013 2622 2644 MKI67 Antigen KI-67 yes yes 4 2.982E-11 53.342 1 1 0.91444 1.128 19.632 2 Median 1.062 1.296 NaN 1 0 Median 0.78735 0.98183 NaN 1 0 Median 44803000 21923000 22880000 32392000 15445000 16948000 12410000 6477700 5932400 1757 762 1901 2858;2859 4654;4655;4656;4657 4655 4 LTRDETNYGIPQR MILSASRDKTIIMWKLTRDETNYGIPQRAL WKLTRDETNYGIPQRALRGHSHFVSDVVIS K L T Q R A 0 2 1 1 0 1 1 1 0 1 1 0 0 0 1 0 2 0 1 0 0 0 13 1 1561.7849 E9KL35;P63244;D6RFX4;D6RFZ9;B4DVD2;D6RHH4;D6R9Z1;D6R9L0;D6RAU2;E9PD14;D6RBD0;D6RAC2;D6REE5;D6RGK8;D6R909;B4E0C3;B4DWC6 E9KL35 45 57 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 3 0.0066789 37.594 1 2.2502 3.5808 NaN 1 Median NaN NaN NaN 0 0 Median 2.2502 3.5808 NaN 1 0 Median 13898000 4337700 9559900 0 0 0 13898000 4337700 9559900 1758 610 1902 2860 4658;4659 4658 2 LTRTSGETTQTHTEPTGDSK LVKVDMKEEPLAVSKLTRTSGETTQTHTEP GETTQTHTEPTGDSKSIKAFKESPKQILDP K L T S K S 0 1 0 1 0 1 2 2 1 0 1 1 0 0 1 2 7 0 0 0 0 0 20 1 2146.0138 P46013 P46013 2501 2520 MKI67 Antigen KI-67 yes yes 3 3.0207E-11 66.853 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1759 762 1903 2861 4660 4660 1979 0 LTSPVTSISPIQASEK PPTVTKITGGSSVPKLTSPVTSISPIQASE TSPVTSISPIQASEKTAVSDILKMSLMEAQ K L T E K T 1 0 0 0 0 1 1 0 0 2 1 1 0 0 2 4 2 0 0 1 0 0 16 0 1656.8934 B4E1Z2;E9PMC9;B3KWI5;Q7Z589;B4E247 B4E1Z2 810 825 C11orf30;EMSY Protein EMSY yes no 2 3.2584E-35 122.01 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1760 451 1904 2862;2863 4661;4662;4663;4664 4664 660;661;1879 0 LTTTGQVTSPVK KAAGTPKKKAVVQAKLTTTGQVTSPVKGAS QAKLTTTGQVTSPVKGASFVTSTNPRKFSG K L T V K G 0 0 0 0 0 1 0 1 0 0 1 1 0 0 1 1 4 0 0 2 0 0 12 0 1230.682 P49916;K7ENR9;Q96DF0;K7ERZ5 P49916 202 213 LIG3 DNA ligase 3 yes no 2 5.6908E-08 101.53 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1761 770 1905 2864;2865 4665;4666;4667 4667 1249;1987 0 LTWHAYPEDAENK NVKCPQIVIAFYEERLTWHAYPEDAENKEK ERLTWHAYPEDAENKEKETAKS________ R L T N K E 2 0 1 1 0 0 2 0 1 0 1 1 0 0 1 0 1 1 1 0 0 0 13 0 1572.7209 V9HWG0;P45973;Q6I9T7 V9HWG0 172 184 HEL25;CBX5 Chromobox protein homolog 5 yes no 2 2.8202E-09 78.342 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 11059000 11059000 0 0 0 0 11059000 11059000 0 1762 761 1906 2866 4668 4668 1 LTWHSCPEDEAQ NMKCPQIVIAFYEERLTWHSCPEDEAQ___ EERLTWHSCPEDEAQ_______________ R L T A Q - 1 0 0 1 1 1 2 0 1 0 1 0 0 0 1 1 1 1 0 0 0 0 12 0 1471.6038 A4D177;Q13185 A4D177 172 183 CBX3 Chromobox protein homolog 3 yes no 2 6.8221E-13 86.313 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1763 309 1907 2867 4669 4669 460 0 LVAIVDVIDQNR VGRVAYVSFGPHAGKLVAIVDVIDQNRALV AGKLVAIVDVIDQNRALVDGPCTQVRRQAM K L V N R A 1 1 1 2 0 1 0 0 0 2 1 0 0 0 0 0 0 0 0 3 0 0 12 0 1353.7616 A8K7N0;Q6IPH7;P50914;E7EPB3;A0PJ62;B7Z6S8;A8K3Q9 A8K7N0 24 35 RPL14 60S ribosomal protein L14 yes no 2 1.5155E-08 102.06 1 0.59976 0.80666 NaN 1 Median NaN NaN NaN 0 0 Median 0.59976 0.80666 NaN 1 0 Median 32973000 20441000 12532000 0 0 0 32973000 20441000 12532000 1764 370 1908 2868 4670;4671 4670 2 LVELNEDVRPHIR KNDNELLKLIPFLEKLVELNEDVRPHIRDR EKLVELNEDVRPHIRDRFRLHDLLPPD___ K L V I R D 0 2 1 1 0 0 2 0 1 1 2 0 0 0 1 0 0 0 0 2 0 0 13 1 1588.8685 A0A024R5Q8;Q05D32 A0A024R5Q8 442 454 CTDSPL2 CTD small phosphatase-like protein 2 yes no 3 0.0035072 45.915 1 0.33417 0.41844 NaN 1 Median NaN NaN NaN 0 0 Median 0.33417 0.41844 NaN 1 0 Median 3060600 1849900 1210700 0 0 0 3060600 1849900 1210700 1765 72 1909 2869 4672 4672 1 LVETDFSTPTPR HKSNGGIVWGNIKKKLVETDFSTPTPRRKT KKKLVETDFSTPTPRRKTPFNTDLGENSGI K L V P R R 0 1 0 1 0 0 1 0 0 0 1 0 0 1 2 1 3 0 0 1 0 0 12 0 1361.6827 Q6P0N0 Q6P0N0 1080 1091 MIS18BP1 Mis18-binding protein 1 yes yes 2 0.00016525 79.633 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1766 858 1910 2870;2871 4673;4674;4675 4675 2010;2011 0 LVNTTITPEPEPKPQPNSREK DSDDDLDIASLVTAKLVNTTITPEPEPKPQ TPEPEPKPQPNSREKAKTRGAPRTSLFEND K L V E K A 0 1 2 0 0 1 3 0 0 1 1 2 0 0 5 1 3 0 0 1 0 0 21 2 2374.2492 A0A024RAC0;Q86V48 A0A024RAC0 673 693 LUZP1 Leucine zipper protein 1 yes no 3 4.5801E-10 50.857 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1767 127 1911 2872 4676 4676 181;1798;1799 0 LVPVHYDETEAEREK KKSVKGVSKKYVPPRLVPVHYDETEAEREK LVPVHYDETEAEREKKRLERAKRRALSSSV R L V E K K 1 1 0 1 0 0 4 0 1 0 1 1 0 0 1 0 1 0 1 2 0 0 15 1 1813.8846 H0YJ17;Q8NEJ9 H0YJ17 124 138 NGDN Neuroguidin yes no 4 0.00225 27.643 1 0.41572 0.61522 NaN 1 Median NaN NaN NaN 0 0 Median 0.41572 0.61522 NaN 1 0 Median 22174000 14750000 7424600 0 0 0 22174000 14750000 7424600 1768 655 1912 2873 4677 4677 1 LVSESSDVLPK SRAVVVKKIETRDGKLVSESSDVLPK____ RDGKLVSESSDVLPK_______________ K L V P K - 0 0 0 1 0 0 1 0 0 0 2 1 0 0 1 3 0 0 0 2 0 0 11 0 1172.6289 CON__P05787;P05787;Q969I0;Q7L4M3 CON__P05787 473 483 KRT8 Keratin, type II cytoskeletal 8 yes no 2 2.6403E-20 117.41 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 + 1769 575 1913;1914 2874;2875;2876;2877 4678;4679;4680;4681;4682 4679 856;857;858 0 LVSPEPPPK KRLWKVCIEHHTFFRLVSPEPPPKGFLVMG HHTFFRLVSPEPPPKGFLVMGSKFRYSGRT R L V P K G 0 0 0 0 0 0 1 0 0 0 1 1 0 0 4 1 0 0 0 1 0 0 9 0 962.54368 B3KUB6;B7Z653;A0A0C4DH22;Q9H4G0 B3KUB6 279 287 EPB41L1 Band 4.1-like protein 1 yes no 2 0.012678 62.823 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1770 247 1915 2878 4683 4683 346 0 LVVGNGPEGPGLSSTGK RADGKNMRESCCKRKLVVGNGPEGPGLSST VGNGPEGPGLSSTGKRRATGQDSCQERGLQ K L V G K R 0 0 1 0 0 0 1 5 0 0 2 1 0 0 2 2 1 0 0 2 0 0 17 0 1567.8206 A0PJ70;A8K9K0;Q8TF76 A0PJ70 275 291 GSG2 Serine/threonine-protein kinase haspin yes no 2 2.3227E-05 48.391 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1771 299 1916;1917 2879;2880 4684;4685 4685 446;447;1833 0 LVVSHGSIDLDVGGEEL QALAFAPFSPPKRLRLVVSHGSIDLDVGGE VSHGSIDLDVGGEEL_______________ R L V E L - 0 0 0 2 0 0 2 3 1 1 3 0 0 0 0 2 0 0 0 3 0 0 17 0 1737.8785 A0A0D9SF94;Q86Y97 A0A0D9SF94 331 347 SUV420H2 Histone-lysine N-methyltransferase SUV420H2 yes no 2 2.3562E-07 67.234 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1772 251 1918 2881 4686 4686 349 0 LYNVVVDTEVTGK DTSATTALELVAGERLYNVVVDTEVTGKKL ERLYNVVVDTEVTGKKLLERGELKRRYTII R L Y G K K 0 0 1 1 0 0 1 1 0 0 1 1 0 0 0 0 2 0 1 4 0 0 13 0 1435.7559 B7ZLZ7;A0A024R158;O95347;A8K984;B3KMB1;Q2KQ72;Q05BV1 B7ZLZ7 549 561 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 yes no 2 0.0026424 61.353 1 1 0.715 0.91436 13.72 2 Median 0.81323 1.0075 NaN 1 0 Median 0.62864 0.82982 NaN 1 0 Median 17945000 10611000 7334400 3932700 2242500 1690200 14013000 8368300 5644200 1773 27 1919 2882;2883 4687;4688;4689;4690 4688 4 LYNVVVDTEVTGKK DTSATTALELVAGERLYNVVVDTEVTGKKL RLYNVVVDTEVTGKKLLERGELKRRYTIIP R L Y K K L 0 0 1 1 0 0 1 1 0 0 1 2 0 0 0 0 2 0 1 4 0 0 14 1 1563.8508 B7ZLZ7;A0A024R158;O95347;A8K984;B3KMB1;Q2KQ72;Q05BV1 B7ZLZ7 549 562 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 yes no 3 0.021502 16.744 1 0.60596 0.74387 NaN 1 Median NaN NaN NaN 0 0 Median 0.60596 0.74387 NaN 1 0 Median 9243300 6080400 3162900 0 0 0 9243300 6080400 3162900 1774 27 1920 2884 4691 4691 1 LYNYFYDR EIEIQAHLHHPNILRLYNYFYDRRRIYLIL HHPNILRLYNYFYDRRRIYLILEYAPRGEL R L Y D R R 0 1 1 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 3 0 0 0 8 0 1152.524 J3QR41;J3KTD6;J3QLN8;Q96GD4;J3KT86;B2RC06 J3QR41 99 106 AURKB Aurora kinase B yes no 2 0.006339 75.109 1 0.75553 0.96898 NaN 1 Median NaN NaN NaN 0 0 Median 0.75553 0.96898 NaN 1 0 Median 18205000 10555000 7650300 0 0 0 18205000 10555000 7650300 1775 681 1921 2885 4692 4692 1 LYNYFYDRR EIEIQAHLHHPNILRLYNYFYDRRRIYLIL HPNILRLYNYFYDRRRIYLILEYAPRGELY R L Y R R R 0 2 1 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 3 0 0 0 9 1 1308.6251 J3QR41;J3KTD6;J3QLN8;Q96GD4;J3KT86;B2RC06 J3QR41 99 107 AURKB Aurora kinase B yes no 3 0.005549 36.693 1 0.73094 1.2109 NaN 1 Median NaN NaN NaN 0 0 Median 0.73094 1.2109 NaN 1 0 Median 19323000 10807000 8515900 0 0 0 19323000 10807000 8515900 1776 681 1922 2886 4693 4693 1 LYSILQGDSPTK LFENQTPAHVYYRWKLYSILQGDSPTKWRT RWKLYSILQGDSPTKWRTEDFRMFKNGSFW K L Y T K W 0 0 0 1 0 1 0 1 0 1 2 1 0 0 1 2 1 0 1 0 0 0 12 0 1320.6925 O15042 O15042 477 488 U2SURP U2 snRNP-associated SURP motif-containing protein yes yes 2 2.8909E-13 85.845 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1777 698 1923 2887 4694 4694 1938 0 LYYDTDYGSK EASVDPSLSWGQRKKLYYDTDYGSKSRGRQ GQRKKLYYDTDYGSKSRGRQSQQEAEEEER K L Y S K S 0 0 0 2 0 0 0 1 0 0 1 1 0 0 0 1 1 0 3 0 0 0 10 0 1223.5346 Q9NQZ2 Q9NQZ2 135 144 UTP3 Something about silencing protein 10 yes yes 2 0.02443 43.282 1 0.58995 0.78669 NaN 1 Median NaN NaN NaN 0 0 Median 0.58995 0.78669 NaN 1 0 Median 5351200 3553100 1798100 0 0 0 5351200 3553100 1798100 1778 933 1924 2888 4695 4695 1 MAIMVQSPMFDGK SCKKCSESIPKDSLRMAIMVQSPMFDGKVP LRMAIMVQSPMFDGKVPHWYHFSCFWKVGH R M A G K V 1 0 0 1 0 1 0 1 0 1 0 1 3 1 1 1 0 0 0 1 0 0 13 0 1453.6768 A0A024R3T8;P09874;B2R5W3;B4E0E1;Q05D33;Q6PJL0;Q5VX84;Q5VX85 A0A024R3T8 35 47 PARP1 Poly [ADP-ribose] polymerase 1 yes no 2 1.7895E-54 138.42 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1779 56 1925 2889 4696;4697 4697 9;10;11 61 0 MAPALSGANLTSPR RTAAALAPASLTSARMAPALSGANLTSPRV RMAPALSGANLTSPRVPLSAYERVSGRTSP R M A P R V 3 1 1 0 0 0 0 1 0 0 2 0 1 0 2 2 1 0 0 0 0 0 14 0 1384.7133 A0A140VK53;Q9UQ35;O60382 A0A140VK53 2371 2384 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 yes no 2 0.0013659 46.797 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1780 284 1926 2890 4698 4698 59 406 0 MAPTPIPTRSPSDSSTASTPVAEQIER PFNHRPGSHLDSHRRMAPTPIPTRSPSDSS DSSTASTPVAEQIERALDEVTSSQPPPLPP R M A E R A 3 2 0 1 0 1 2 0 0 2 0 0 1 0 5 5 4 0 0 1 0 0 27 1 2825.3865 B3KSQ7;Q16643;B7Z2Z0;D6R9Q9 B3KSQ7 278 304 DBN1 Drebrin yes no 3 2.8634E-09 41.209 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1781 444 1927;1928 2891;2892 4699;4700 4700 89 648;649;650;1878 0 MASVVIDDLPK LLSTHHTQEEDISSKMASVVIDDLPKEGEK ISSKMASVVIDDLPKEGEKQDLSSIKVNVT K M A P K E 1 0 0 2 0 0 0 0 0 1 1 1 1 0 1 1 0 0 0 2 0 0 11 0 1186.6268 B5MDQ0;Q2NKX8 B5MDQ0 649 659 ERCC6L DNA excision repair protein ERCC-6-like yes no 2 0.00069143 67.519 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1782 535 1929 2893 4701 4701 103 772 0 MATEVAADALGEEWK EVDDERKLRTFYEKRMATEVAADALGEEWK MATEVAADALGEEWKGYVVRISGGNDKQGF R M A W K G 4 0 0 1 0 0 3 1 0 0 1 1 1 0 0 0 1 1 0 1 0 0 15 0 1619.7501 Q96DV6;A2A3R6;P62753;A2A3R5;A2A3R7 Q96DV6 32 46 RPS6 40S ribosomal protein S6 yes no 2 2.9396E-18 110.98 1 1 0.61041 0.7621 59.493 2 Median 0.93812 1.1607 NaN 1 0 Median 0.39718 0.5004 NaN 1 0 Median 76885000 54378000 22506000 3899300 1951200 1948000 72986000 52427000 20558000 1783 303 1930 2894;2895 4702;4703;4704;4705 4705 63 4 MDPQRSPLLEVK ______________________________ ______________________________ - M D V K G 0 1 0 1 0 1 1 0 0 0 2 1 1 0 2 1 0 0 0 1 0 0 12 1 1411.7493 A2AB20;A0A140T9E6;B4E063;A0A024RCS7;Q9BW19 A2AB20 1 12 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 yes no 2 0.00065231 48.467 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1784 163 1931 2896 4706 4706 35 225 0 MDRTPPPPTLSPAAITVGR VCEEEMPEESDECVRMDRTPPPPTLSPAAI PPPPTLSPAAITVGRGEDLTSEHPLLEQVE R M D G R G 2 2 0 1 0 0 0 1 0 1 1 0 1 0 5 1 3 0 0 1 0 0 19 1 1976.0513 E7EX82;B4E2T1;Q8NDX5;H7C4H9;A5YM43 E7EX82 565 583 PHC3 Polyhomeotic-like protein 3 yes no 3 3.2202E-06 45.957 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1785 521 1932 2897 4707 4707 100 755;1893 0 MDSLLPPSR ______________________________ ______________________________ - M D S R F 0 1 0 1 0 0 0 0 0 0 2 0 1 0 2 2 0 0 0 0 0 0 9 0 1014.5168 B4E2Q0 B4E2Q0 1 9 ATP2C1 Calcium-transporting ATPase yes yes 2 0.010878 41.54 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1786 520 1933 2898 4708 4708 753 0 MDSNFGLAGLPGSPK DYNMQVDPVDMESTRMDSNFGLAGLPGSPK MDSNFGLAGLPGSPKKRVRIECKCGTESCR R M D P K K 1 0 1 1 0 0 0 3 0 0 2 1 1 1 2 2 0 0 0 0 0 0 15 0 1489.7235 O43463 O43463 379 393 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 yes yes 2 5.9969E-09 95.9 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1787 701 1934 2899;2900 4709;4710;4711;4712;4713;4714;4715 4714 147 1032 0 MDSNFGLAGLPGSPKK DYNMQVDPVDMESTRMDSNFGLAGLPGSPK DSNFGLAGLPGSPKKRVRIECKCGTESCRK R M D K K R 1 0 1 1 0 0 0 3 0 0 2 2 1 1 2 2 0 0 0 0 0 0 16 1 1617.8185 O43463 O43463 379 394 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 yes yes 2;3 4.77E-59 141.6 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1788 701 1935 2901;2902;2903;2904 4716;4717;4718;4719;4720 4717 147 1032 0 MEGESSRFEIHTPVSDK ______________________________ GESSRFEIHTPVSDKKKKKCSIHKERPQKH - M E D K K 0 1 0 1 0 0 3 1 1 1 0 1 1 1 1 3 1 0 0 1 0 0 17 1 1947.8996 B4DZG2;A0A024R8C1;Q15361 B4DZG2 1 17 TTF1 Transcription termination factor 1 yes no 3 1.9401E-05 55.228 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1789 103 1936 2905 4721 4721 22 146;1794 0 METEADAPSPAPSLGER NQEEKPEKNSRIGEKMETEADAPSPAPSLG TEADAPSPAPSLGERLEPRKIPLEDEVPGV K M E E R L 3 1 0 1 0 0 3 1 0 0 1 0 1 0 3 2 1 0 0 0 0 0 17 0 1756.7938 Q12873;B4DLC6;B3KWV4;B4DKV1;Q2TAZ1 Q12873 1593 1609 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes no 2 3.4842E-61 142.91 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1790 806 1937 2906;2907 4722;4723;4724;4725;4726;4727 4724 193 1324 0 MEVSPLQPVNENMQVNK ______________________________ VSPLQPVNENMQVNKIKKNEDAKKRLSVER - M E N K I 0 0 3 0 0 2 2 0 0 0 1 1 2 0 2 1 0 0 0 3 0 0 17 0 1955.9445 P11388 P11388 1 17 TOP2A DNA topoisomerase 2-alpha yes yes 2 1.4438E-13 98.676 2 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1791 734 1938;1939 2908;2909;2910;2911;2912 4728;4729;4730;4731;4732;4733;4734;4735;4736 4729 157;164 1138 0 MFPASPWAQPAQAK ______________________________ ______________________________ - M F A K W 4 0 0 0 0 2 0 0 0 0 0 1 1 1 3 1 0 1 0 0 0 0 14 0 1528.7497 B1AJR3 B1AJR3 1 14 LL22NC03-75H12.2-001 yes yes 2 0.0016057 47.189 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1792 391 1940 2913 4737 4737 590 0 MGHSAPLTNIR IFDGPTGEGRLLRFRMGHSAPLTNIRYYGQ LRFRMGHSAPLTNIRYYGQNGQQILSASQD R M G I R Y 1 1 1 0 0 0 0 1 1 1 1 0 1 0 1 1 1 0 0 0 0 0 11 0 1195.6132 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 320 330 WDR36 WD repeat-containing protein 36 yes no 3 0.0017287 49.777 1 0.66047 0.84731 NaN 1 Median NaN NaN NaN 0 0 Median 0.66047 0.84731 NaN 1 0 Median 15604000 9768700 5835100 0 0 0 15604000 9768700 5835100 1793 225 1941 2914 4738 4738 45 1 MGSDEFDISPR YAKQQALEAQKRKKKMGSDEFDISPRISKQ RKKKMGSDEFDISPRISKQQEGSSASSVDL K M G P R I 0 1 0 2 0 0 1 1 0 1 0 0 1 1 1 2 0 0 0 0 0 0 11 0 1252.5394 B9EGR5;Q8IWI9 B9EGR5 2324 2334 MGA MAX gene-associated protein yes no 2 2.2331E-65 147.7 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1794 555 1942 2915 4739 4739 107 829;830 0 MGSSLVIEISEEEVNK SGTMTGGGSKVMKGRMGSSLVIEISEEEVN GSSLVIEISEEEVNKMESQLQNDSKKAMQI R M G N K M 0 0 1 0 0 0 4 1 0 2 1 1 1 0 0 3 0 0 0 2 0 0 16 0 1762.8659 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 763 778 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 2 0.00041545 59.116 1 0.58176 0.72576 NaN 1 Median NaN NaN NaN 0 0 Median 0.58176 0.72576 NaN 1 0 Median 34903000 20875000 14028000 0 0 0 34903000 20875000 14028000 1795 941 1943 2916 4740;4741;4742 4742 219 3 MINTDLSR KAASLKSNYNLPMHKMINTDLSRILKSPEI YNLPMHKMINTDLSRILKSPEIQRALRAPR K M I S R I 0 1 1 1 0 0 0 0 0 1 1 0 1 0 0 1 1 0 0 0 0 0 8 0 948.46987 Q59GY2;P36578;H3BM89;B4DMJ6;B4DMJ2 Q59GY2 298 305 RPL4 60S ribosomal protein L4 yes no 2 0.00012416 96.253 1 0.61388 0.81706 NaN 1 Median NaN NaN NaN 0 0 Median 0.61388 0.81706 NaN 1 0 Median 10610000 6353500 4256400 0 0 0 10610000 6353500 4256400 1796 755 1944 2917 4743 4743 170 1 MKLPEHPEGGEPEDDEAPAK KRRHSEVETDSKKKKMKLPEHPEGGEPEDD HPEGGEPEDDEAPAKGKFNWKGTIKAILKQ K M K A K G 2 0 0 2 0 0 5 2 1 0 1 2 1 0 4 0 0 0 0 0 0 0 20 1 2174.979 Q9NX58;A8K3Y5 Q9NX58 287 306 LYAR Cell growth-regulating nucleolar protein yes no 3 2.3881E-08 52.541 1 0.68928 0.84258 NaN 1 Median NaN NaN NaN 0 0 Median 0.68928 0.84258 NaN 1 0 Median 27763000 13909000 13853000 0 0 0 27763000 13909000 13853000 1797 944 1945 2918 4744 4744 222 1 MKVELCSFSGYK ______________________________ ______________________________ - M K Y K I 0 0 0 0 1 0 1 1 0 0 1 2 1 1 0 2 0 0 1 1 0 0 12 1 1447.684 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 1 12 RPL24;HEL-S-310 60S ribosomal protein L24 yes no 2 6.6195E-06 96.604 1 0.37685 0.45501 NaN 1 Median NaN NaN NaN 0 0 Median 0.37685 0.45501 NaN 1 0 Median 45629000 32767000 12862000 0 0 0 45629000 32767000 12862000 1798 563 1946 2919 4745;4746 4745 111 2 MLAIKR VLRLECVEPNCRSKRMLAIKRCKHFELGGD VEPNCRSKRMLAIKRCKHFELGGDKKRKGQ R M L K R C 1 1 0 0 0 0 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 0 6 1 730.45237 B2R4V2;Q969Q0;R4GN19;F5GYZ4;H0Y5B4;H7BZ11;J3KQN4;P83881 B2R4V2 82 87 RPL36AL;RPL36A;NLRP2;RPL36A-HNRNPH2 60S ribosomal protein L36a-like;60S ribosomal protein L36a no no 2 0.012873 48.101 1 0.41665 0.61329 NaN 1 Median NaN NaN NaN 0 0 Median 0.41665 0.61329 NaN 1 0 Median 21031000 13421000 7609400 0 0 0 21031000 13421000 7609400 1799 401;650 1947 2920 4747 4747 82 1 MLDHEYTTK KLSPKAEEVATFFAKMLDHEYTTKEIFRKN ATFFAKMLDHEYTTKEIFRKNFFKDWRKEM K M L T K E 0 0 0 1 0 0 1 0 1 0 1 1 1 0 0 0 2 0 1 0 0 0 9 0 1136.5172 P11387;B9EG90;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;E5RIC7;E5RJ33;H0YBR3;H0YC03;E5RGE7;E5RGR4;E5RFE3;E5RGR2;E5RJ95;E5RFS0;D3DWJ7 P11387 263 271 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial yes no 2 3.7501E-19 114.89 2 0.75323 0.95509 2.834 2 Median NaN NaN NaN 0 0 Median 0.75323 0.95509 2.834 2 0 Median 49834000 28953000 20881000 0 0 0 49834000 28953000 20881000 1800 733 1948 2921;2922 4748;4749;4750 4749 155 3 MLEPPPSAKPFTIDVDK AELNSTTEELHKYQKMLEPPPSAKPFTIDV EPPPSAKPFTIDVDKKLEEGQKNIRLLRTE K M L D K K 1 0 0 2 0 0 1 0 0 1 1 2 1 1 4 1 1 0 0 1 0 0 17 1 1883.9703 O95235 O95235 716 732 KIF20A Kinesin-like protein KIF20A yes yes 3 1.0699E-05 51.469 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1801 716 1949 2923 4751 4751 150 1077 0 MLPHAPGVQMQAIPEDAIPEESGDEDEDDPDK EYLEKIKQRLFENLRMLPHAPGVQMQAIPE IPEESGDEDEDDPDKRISICSSDKRIACEE R M L D K R 3 0 0 6 0 2 5 2 1 2 1 1 2 0 5 1 0 0 0 1 0 0 32 0 3474.5079 Q6IT96;B5BU61;Q13547;B4DRG0;Q5HYD4 Q6IT96 372 403 HDAC1;DKFZp686H12203 Histone deacetylase;Histone deacetylase 1 yes no 3 1.8854E-38 74.321 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1802 528 1950 2924 4752 4752 101;102 764 0 MLPHAPGVQMQAIPEDAIPEESGDEDEDDPDKR EYLEKIKQRLFENLRMLPHAPGVQMQAIPE PEESGDEDEDDPDKRISICSSDKRIACEEE R M L K R I 3 1 0 6 0 2 5 2 1 2 1 1 2 0 5 1 0 0 0 1 0 0 33 1 3630.609 Q6IT96;B5BU61;Q13547;B4DRG0;Q5HYD4 Q6IT96 372 404 HDAC1;DKFZp686H12203 Histone deacetylase;Histone deacetylase 1 yes no 4 5.7326E-25 54.732 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1803 528 1951 2925 4753 4753 101;102 764 0 MLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKR EYMEKIKQRLFENLRMLPHAPGVQMQAIPE HEDSGDEDGEDPDKRISIRASDKRIACDEE R M L K R I 3 1 0 6 0 2 4 3 2 1 1 1 2 0 4 1 0 0 0 2 0 0 33 1 3584.5784 B3KUJ5;Q92769;Q59GB9 B3KUJ5 343 375 HDAC2 Histone deacetylase;Histone deacetylase 2 yes no 4 4.3085E-25 56.547 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1804 447 1952 2926 4754 4754 90;91 653 0 MMGGAGPGSSLEARSPSDLHISPLAK GPPNPPGPSPKALAKMMGGAGPGSSLEARS EARSPSDLHISPLAKKLPPPPGSPLGHSPT K M M A K K 3 1 0 1 0 0 1 4 1 1 3 1 2 0 3 5 0 0 0 0 0 0 26 1 2565.2679 B9EGQ5;M0QXA7;O95785;B3KR89 B9EGQ5 294 319 WIZ Protein Wiz yes no 4 4.1705E-21 72.841 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1805 554 1953 2927 4755 4755 105;106 822;823 0 MNEEISSDSESESLAPR ADSAGDRGKSKGGGKMNEEISSDSESESLA EEISSDSESESLAPRKPEEEEEEELEETAQ K M N P R K 1 1 1 1 0 0 4 0 0 1 1 0 1 0 1 5 0 0 0 0 0 0 17 0 1879.8106 O43818 O43818 45 61 RRP9 U3 small nucleolar RNA-interacting protein 2 yes yes 2 0 246.27 5 4 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1806 703 1954;1955;1956 2928;2929;2930;2931;2932;2933;2934;2935;2936 4756;4757;4758;4759;4760;4761;4762;4763;4764;4765;4766;4767;4768;4769;4770;4771;4772;4773 4760 148 1040;1041;1042 0 MPCESSPPESADTPTSTR PGHTEEAVAAGKTTKMPCESSPPESADTPT ESSPPESADTPTSTRRQPKTPLEKRDVQKE K M P T R R 1 1 0 1 1 0 2 0 0 0 0 0 1 0 4 4 3 0 0 0 0 0 18 0 1948.8143 P46013 P46013 1371 1388 MKI67 Antigen KI-67 yes yes 2 2.6761E-65 139.88 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1807 762 1957;1958 2937;2938;2939;2940 4774;4775;4776;4777;4778;4779;4780;4781;4782 4778 179 1223;1224 0 MPCESSPPESADTPTSTRR PGHTEEAVAAGKTTKMPCESSPPESADTPT SSPPESADTPTSTRRQPKTPLEKRDVQKEL K M P R R Q 1 2 0 1 1 0 2 0 0 0 0 0 1 0 4 4 3 0 0 0 0 0 19 1 2104.9154 P46013 P46013 1371 1389 MKI67 Antigen KI-67 yes yes 3 6.0691E-06 44.953 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1808 762 1959 2941 4783 4783 179 1223;1224 0 MPFQTSPGGK VKRVLEKSPGKLLVKMPFQTSPGGKAEGGG KLLVKMPFQTSPGGKAEGGGATTSTQVMVI K M P G K A 0 0 0 0 0 1 0 2 0 0 0 1 1 1 2 1 1 0 0 0 0 0 10 0 1048.5012 A0A075BPP5;I6LM39;D6QZ43;A0A087X1U4;C6KG44;E1B2J3;E9LUH3;D9ZNA4;D5L9I5;D3YJ43;D0UU70;A8K079;A0A140VKC4;E9LUH4;P51608;C6KG45 A0A075BPP5 98 107 MECP2 Methyl-CpG-binding protein 2 yes no 2 3.9955E-13 108.68 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1809 178 1960 2942;2943 4784;4785;4786;4787 4786 39 244 0 MPTQSEEEKLSPSPTTEDPR CAICWLYWKKYGGLKMPTQSEEEKLSPSPT EEEKLSPSPTTEDPRVRSHVSRQAMQGMPV K M P P R V 0 1 0 1 0 1 4 0 0 0 1 1 1 0 4 3 3 0 0 0 0 0 20 1 2258.0373 D6W5A2;E7EV10;Q9BTC8;E7EQY4;Q53QZ9 D6W5A2 361 380 MTA3;tmp_locus_6 Metastasis-associated protein MTA3 yes no 3 1.3966E-06 40.682 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1810 601 1961 2944 4788 4788 123 899 0 MQEVVANLQYDDGSGMKR DGDLIESFLDISRPKMQEVVANLQYDDGSG VVANLQYDDGSGMKREATADDLIKVVEELT K M Q K R E 1 1 1 2 0 2 1 2 0 0 1 1 2 0 0 1 0 0 1 2 0 0 18 1 2039.9405 Q16531;B4DZP5;B4DSA8 Q16531 1105 1122 DDB1 DNA damage-binding protein 1 yes no 3 1.0256E-06 60.034 1 0.63085 0.89651 NaN 1 Median NaN NaN NaN 0 0 Median 0.63085 0.89651 NaN 1 0 Median 16185000 9365500 6819100 0 0 0 16185000 9365500 6819100 1811 827 1962 2945 4789;4790 4790 196;197 2 MSGECAPNVSVSVSTSHTTISGGGSR EIATYRTLLEGEESRMSGECAPNVSVSVST SVSTSHTTISGGGSRGGGGGGYGSGGSSYG R M S S R G 1 1 1 0 1 0 1 4 1 1 0 0 1 0 1 7 3 0 0 3 0 0 26 0 2564.1595 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;H6VRG2;H6VRF9;CON__P04264 H6VRG3 493 518 KRT1 Keratin, type II cytoskeletal 1 yes no 3 0.00015266 42.708 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 57288000 57288000 0 0 0 0 57288000 57288000 0 + 1812 670 1963 2946 4791 4791 141 1 MSGFIYQGK LLFPNVLLMLSASPRMSGFIYQGKLPTTGM LSASPRMSGFIYQGKLPTTGMTITKLEDSE R M S G K L 0 0 0 0 0 1 0 2 0 1 0 1 1 1 0 1 0 0 1 0 0 0 9 0 1029.4954 F6SJA5;Q8N4Q3;E7EUY6;E9PDQ5;B7Z344;A0A024RDY9;B7Z3C7;Q5W9H1;B1ALK7;B7Z6G2;Q15052;Q14155 F6SJA5 33 41 ARHGEF7;KIAA0142;ARHGEF6 Rho guanine nucleotide exchange factor 6;Rho guanine nucleotide exchange factor 7 yes no 2 0.0019752 54.584 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1813 173 1964 2947 4792 4792 38 234 0 MSMQELNPETSTDCDAR DVLSTSKDLLSKPEKMSMQELNPETSTDCD MQELNPETSTDCDARQISLQQQLIHVMEHI K M S A R Q 1 1 1 2 1 1 2 0 0 0 1 0 2 0 1 2 2 0 0 0 0 0 17 0 1983.7972 H0YNU5;B2RAN0;P54132;Q3B7X0;B7Z2X2 H0YNU5 348 364 BLM Bloom syndrome protein yes no 2 8.337E-06 48.314 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1814 412 1965 2948 4793 4793 83;84 606;1873 0 MTDFDRFK TRWAKKIEARERKAKMTDFDRFKVMKAKKM ARERKAKMTDFDRFKVMKAKKMRNRIIKDE K M T F K V 0 1 0 2 0 0 0 0 0 0 0 1 1 2 0 0 1 0 0 0 0 0 8 1 1058.4855 A8K7N0;Q6IPH7;P50914;E7EPB3;A0PJ62;B7Z6S8;A8K3Q9 A8K7N0 104 111 RPL14 60S ribosomal protein L14 yes no 2 2.3798E-38 133.9 1 0.49786 0.7941 NaN 1 Median NaN NaN NaN 0 0 Median 0.49786 0.7941 NaN 1 0 Median 176870000 119930000 56935000 0 0 0 176870000 119930000 56935000 1815 370 1966 2949 4794;4795;4796 4794 73 3 MTQNPNYYNLQGISHR QDAVDYLTWTFLYRRMTQNPNYYNLQGISH TQNPNYYNLQGISHRHLSDHLSELVEQTLS R M T H R H 0 1 3 0 0 2 0 1 1 1 1 0 1 0 1 1 1 0 2 0 0 0 16 0 1934.9057 A4FU77;O75643;Q7L5W4;Q9UNV9;B4E0P5;A2RRQ7;B4E150 A4FU77 1515 1530 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 3 1.2734E-06 68.82 1 1.1164 1.4487 NaN 1 Median NaN NaN NaN 0 0 Median 1.1164 1.4487 NaN 1 0 Median 13683000 6538700 7144400 0 0 0 13683000 6538700 7144400 1816 316 1967 2950 4797;4798 4798 67 2 MVNHFIAEFK TAGDTHLGGEDFDNRMVNHFIAEFKRKHKK DFDNRMVNHFIAEFKRKHKKDISENKRAVR R M V F K R 1 0 1 0 0 0 1 0 1 1 0 1 1 2 0 0 0 0 0 1 0 0 10 0 1234.6169 E9PKE3;V9HW22;Q53GZ6;P11142;B3KTV0;Q53HF2;Q96IS6;E9PN89;A8K7Q2;B4E1Q1 E9PKE3 218 227 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein yes no 2 0.026131 43.635 1 1.3594 1.8131 NaN 1 Median NaN NaN NaN 0 0 Median 1.3594 1.8131 NaN 1 0 Median 5444500 2294000 3150500 0 0 0 5444500 2294000 3150500 1817 623 1968 2951 4799 4799 131 1 MWNDLSEK RPEHSESELTRLLARMWNDLSEKKKAKYKA LTRLLARMWNDLSEKKKAKYKAREAALKAQ R M W E K K 0 0 1 1 0 0 1 0 0 0 1 1 1 0 0 1 0 1 0 0 0 0 8 0 1021.4539 B4DNQ1;E9PKP7;A8K962;P17480;O00164;B4DLB0;E9PLT2 B4DNQ1 341 348 UBTF Nucleolar transcription factor 1 yes no 2 0.0049199 65.627 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1818 376 1969 2952 4800;4801 4801 74 573 0 MYSFDDVLEEGK RESQNQKSTVPSRRRMYSFDDVLEEGKRPP RRRMYSFDDVLEEGKRPPTMTVSEASYQSE R M Y G K R 0 0 0 2 0 0 2 1 0 0 1 1 1 1 0 1 0 0 1 1 0 0 12 0 1431.6228 E9PMS6;B7Z8W3;A0A1P7ZIM8;A0A0A0MTE2;E9PMT2;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMP7;H0Y424;E9PJ10 E9PMS6 368 379 LMO7 LIM domain only protein 7 yes no 2 0.0043273 58.674 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1819 227 1970 2953 4802 4802 47 319 0 NAEAVLQSPGLSGK EIKNWDDVLTVDYTRNAEAVLQSPGLSGKV RNAEAVLQSPGLSGKVKRDAEKKDQMKADL R N A G K V 2 0 1 0 0 1 1 2 0 0 2 1 0 0 1 2 0 0 0 1 0 0 14 0 1369.7201 Q59H95;B4DIX0;Q13045 Q59H95 714 727 FLII Protein flightless-1 homolog yes no 2 6.4672E-70 150.34 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1820 468 1971 2954;2955 4803;4804;4805 4804 676 0 NAFDLFKLTPEEK GRKEPKGLKTLKEIRNAFDLFKLTPEEKND IRNAFDLFKLTPEEKNDVSENNRKREEIPL R N A E K N 1 0 1 1 0 0 2 0 0 0 2 2 0 2 1 0 1 0 0 0 0 0 13 1 1550.7981 Q99549;A0A0A0MT47 Q99549 446 458 MPHOSPH8 M-phase phosphoprotein 8 yes no 2 0.0050715 44.457 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1821 913 1972 2956 4806 4806 2032 0 NAHLNALK LPAILDDTTLSGSDRNAHLNALKMNCYALI TLSGSDRNAHLNALKMNCYALIRLLESFET R N A L K M 2 0 2 0 0 0 0 0 1 0 2 1 0 0 0 0 0 0 0 0 0 0 8 0 879.49265 Q15021;B4E0B7;B3KMS0;A0PJ76;F5GZK7 Q15021 111 118 NCAPD2 Condensin complex subunit 1 yes no 2 5.5968E-19 117.18 1 0.43235 0.53409 NaN 1 Median NaN NaN NaN 0 0 Median 0.43235 0.53409 NaN 1 0 Median 25062000 17834000 7228600 0 0 0 25062000 17834000 7228600 1822 820 1973 2957 4807;4808 4807 2 NAIASDSEADSDTEVPK RGSDSEDEVLRMKRKNAIASDSEADSDTEV IASDSEADSDTEVPKDNSGTMDLFGGADDI K N A P K D 3 0 1 3 0 0 2 0 0 1 0 1 0 0 1 3 1 0 0 1 0 0 17 0 1747.7748 B4DNM0;Q8WVC0 B4DNM0 268 284 LEO1 RNA polymerase-associated protein LEO1 yes no 2 2.0535E-52 107.41 3 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1823 487 1974;1975 2958;2959;2960;2961;2962 4809;4810;4811;4812;4813;4814 4813 712;713;714 0 NAIDVTYLLEEGSGRK LNQILLNLLEKIPGKNAIDVTYLLEEGSGR AIDVTYLLEEGSGRKLRRRTLFIPENSFRK K N A R K L 1 1 1 1 0 0 2 2 0 1 2 1 0 0 0 1 1 0 1 1 0 0 16 1 1763.9054 Q9NR48 Q9NR48 2939 2954 ASH1L Histone-lysine N-methyltransferase ASH1L yes yes 2 0.00015351 55.885 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1824 935 1976 2963 4815 4815 1650 0 NASASFQELEDKK PVGRWFEAFVKRRNRNASASFQELEDKKEL NRNASASFQELEDKKELSEESEDEELQLEE R N A K K E 2 0 1 1 0 1 2 0 0 0 1 2 0 1 0 2 0 0 0 0 0 0 13 1 1465.7049 F2Z3H0;F2Z3N9;Q6P5S9;H7C3L7;Q99543 F2Z3H0 45 57 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed yes no 2 3.5611E-10 102.52 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1825 630 1977 2964;2965 4816;4817 4816 956 0 NASMNTQHGTATEVAVETTTPK DEDYCPRSKKANLGKNASMNTQHGTATEVA HGTATEVAVETTTPKQGQNLWFLCDSQKEL K N A P K Q 3 0 2 0 0 1 2 1 1 0 0 1 1 0 1 1 6 0 0 2 0 0 22 0 2287.075 Q9UIG0 Q9UIG0 964 985 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 3 8.1527E-15 68.369 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 8538000 0 8538000 0 0 0 8538000 0 8538000 1826 952 1978 2966 4818 4818 226 1 NASTFEDVTQVSSAYQK ______________________________ STFEDVTQVSSAYQKTVPVEAVTSKTSNIR K N A Q K T 2 0 1 1 0 2 1 0 0 0 0 1 0 1 0 3 2 0 1 2 0 0 17 0 1873.8694 B3KRK4;B4E358;A0A024R5M3;Q53HG7;Q14247 B3KRK4 4 20 CTTN Src substrate cortactin yes no 2 8.2587E-08 83.314 1 1.4381 1.7461 NaN 1 Median 1.4381 1.7461 NaN 1 0 Median NaN NaN NaN 0 0 Median 3460100 1493700 1966400 3460100 1493700 1966400 0 0 0 1827 70 1979 2967 4819;4820 4820 2 NASVYSPSGPVNR PDRRFRYRTTLTRERNASVYSPSGPVNRRT ERNASVYSPSGPVNRRTTTPPDSGVLFEGL R N A N R R 1 1 2 0 0 0 0 1 0 0 0 0 0 0 2 3 0 0 1 2 0 0 13 0 1346.6579 A0A0F6QNT9;Q9NS56 A0A0F6QNT9 188 200 TOPORS E3 ubiquitin-protein ligase Topors yes no 2 0.0040832 43.382 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1828 254 1980 2968 4821 4821 352 0 NAVALSASPQLK VIVKNLQLALANSSRNAVALSASPQLKEAQ SSRNAVALSASPQLKEAQSEKEEAPKPLHK R N A L K E 3 0 1 0 0 1 0 0 0 0 2 1 0 0 1 2 0 0 0 1 0 0 12 0 1197.6717 A7E2X7;A0AV47;Q92547 A7E2X7 794 805 TOPBP1 DNA topoisomerase 2-binding protein 1 yes no 2 5.3936E-09 101.53 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1829 291 1981 2969;2970 4822;4823;4824;4825 4822 436 0 NCIVLIDSTPYR NASNNELVRTKTLVKNCIVLIDSTPYRQWY LVKNCIVLIDSTPYRQWYESHYALPLGRKK K N C Y R Q 0 1 1 1 1 0 0 0 0 2 1 0 0 0 1 1 1 0 1 1 0 0 12 0 1449.7286 Q5JR95;Q5JR94;P62241 Q5JR95 79 90 RPS8 40S ribosomal protein S8 yes no 2 0.0037919 60.434 1 1 0.71807 0.90084 NaN 1 Median 0.71807 0.90084 NaN 1 0 Median NaN NaN NaN 0 0 Median 8501000 6852600 1648400 3550200 1901800 1648400 4950800 4950800 0 1830 785 1982 2971;2972 4826;4827 4827 2 NCLALADDK WGADKCEELLEKTVKNCLALADDKKLKSIA LEKTVKNCLALADDKKLKSIAFPSIGSGRN K N C D K K 2 0 1 2 1 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 9 0 1018.4753 O75367;Q59FH0;B4DJC3 O75367 296 304 H2AFY Core histone macro-H2A.1;Histone H2A yes no 2 0.026421 44.203 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2885300 0 2885300 2885300 0 2885300 0 0 0 1831 709 1983 2973 4828 4828 1 NCLALADDKK WGADKCEELLEKTVKNCLALADDKKLKSIA EKTVKNCLALADDKKLKSIAFPSIGSGRNG K N C K K L 2 0 1 2 1 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 10 1 1146.5703 O75367;Q59FH0;B4DJC3 O75367 296 305 H2AFY Core histone macro-H2A.1;Histone H2A yes no 2;3 3.6314E-08 102.55 1 2 0.5584 0.67276 NaN 1 Median NaN NaN NaN 0 0 Median 0.5584 0.67276 NaN 1 0 Median 53626000 32478000 21148000 1509300 0 1509300 52117000 32478000 19639000 1832 709 1984 2974;2975;2976 4829;4830;4831;4832 4831 4 NCPAVTLTSPAK PKRDSSKDLPSPDSRNCPAVTLTSPAKTKI DSRNCPAVTLTSPAKTKILPPRKGRGLKLE R N C A K T 2 0 1 0 1 0 0 0 0 0 1 1 0 0 2 1 2 0 0 1 0 0 12 0 1257.6387 W5ZR30;Q9UGU0 W5ZR30 1327 1338 TCF20 Transcription factor 20 yes no 2 2.3784E-25 101.39 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1833 949 1985 2977;2978 4833;4834;4835 4834 1690 0 NCQHANAERPTVAR ISTSTSLPRGILKMKNCQHANAERPTVARI KNCQHANAERPTVARISSVQFHPGAQIVMV K N C A R I 3 2 2 0 1 1 1 0 1 0 0 0 0 0 1 0 1 0 0 1 0 0 14 1 1622.7696 Q9Y5J1;B2RAX6;F6VJE8 Q9Y5J1 240 253 UTP18 U3 small nucleolar RNA-associated protein 18 homolog yes no 4 0.00089093 37.55 1 1.0024 1.2671 NaN 1 Median 1.0024 1.2671 NaN 1 0 Median NaN NaN NaN 0 0 Median 4614500 1978600 2635900 4614500 1978600 2635900 0 0 0 1834 968 1986 2979 4836;4837 4837 2 NDEELNKLLGK KKTRIIPRHLQLAIRNDEELNKLLGKVTIA LAIRNDEELNKLLGKVTIAQGGVLPNIQAV R N D G K V 0 0 2 1 0 0 2 1 0 0 3 2 0 0 0 0 0 0 0 0 0 0 11 1 1271.6721 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;B2R5B6 A3KPC7 90 100 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1 yes no 2 0.0076313 50.194 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1835 132 1987 2980 4838 4838 1 NDLQDTEISPR RDLLEEEEAWEASHKNDLQDTEISPRQNRR ASHKNDLQDTEISPRQNRRTRAAESAEIEP K N D P R Q 0 1 1 2 0 1 1 0 0 1 1 0 0 0 1 1 1 0 0 0 0 0 11 0 1286.6103 Q53H10;A0A024R2I7;Q9NS91 Q53H10 463 473 RAD18 E3 ubiquitin-protein ligase RAD18 yes no 2 2.142E-05 95.428 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1836 47 1988 2981 4839;4840;4841;4842 4841 46 0 NDPEITINVPQSSK ELAKTPQKSVSFSLKNDPEITINVPQSSKG KNDPEITINVPQSSKGHSASDKVQPKNNDK K N D S K G 0 0 2 1 0 1 1 0 0 2 0 1 0 0 2 2 1 0 0 1 0 0 14 0 1540.7733 B4DYU9;A0A024R411;Q13416 B4DYU9 127 140 ORC2L;ORC2 Origin recognition complex subunit 2 yes no 2 7.5421E-05 77.562 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1837 58 1989 2982 4843 4843 63;64 0 NDQEPPPEALDFSDDEK TEKLKQDKGSDASWKNDQEPPPEALDFSDD QEPPPEALDFSDDEKEKEAKQRKKSQIQGR K N D E K E 1 0 1 4 0 1 3 0 0 0 1 1 0 1 3 1 0 0 0 0 0 0 17 0 1944.8225 Q96HR8 Q96HR8 303 319 NAF1 H/ACA ribonucleoprotein complex non-core subunit NAF1 yes yes 2 1.1487E-07 68.919 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1838 903 1990 2983 4844;4845 4845 1545 0 NDSPTQIPVSSDVCR FQSNALPTLSASGARNDSPTQIPVSSDVCR NDSPTQIPVSSDVCRLTPA___________ R N D C R L 0 1 1 2 1 1 0 0 0 1 0 0 0 0 2 3 1 0 0 2 0 0 15 0 1673.7679 Q9NSR4;A8K8E1;Q8TC07 Q9NSR4 224 238 DKFZp761D0223;TBC1D15 TBC1 domain family member 15 yes no 2 0.0002507 50.155 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1839 373 1991 2984 4846 4846 569 0 NDSVIVADQTPTPTR HKHKHEMTLKFGPARNDSVIVADQTPTPTR NDSVIVADQTPTPTRFLKNCEEVGLFNELA R N D T R F 1 1 1 2 0 1 0 0 0 1 0 0 0 0 2 1 3 0 0 2 0 0 15 0 1612.8057 E9PEK8;H7C2N6;A4D7U3;B8ZZU6;E9PBF9;P15336 E9PEK8 60 74 ATF2 Cyclic AMP-dependent transcription factor ATF-2 yes no 2 0.0022306 40.493 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1840 315 1992 2985 4847 4847 1837 0 NEDEEEEEEEKDEAEDLLGR TSVKKKVKNVGIFLKNEDEEEEEEEKDEAE EEEEEKDEAEDLLGRGSRAALLTERTRNEM K N E G R G 1 1 1 3 0 0 10 1 0 0 2 1 0 0 0 0 0 0 0 0 0 0 20 1 2405.983 Q9Y5B9 Q9Y5B9 434 453 SUPT16H FACT complex subunit SPT16 yes yes 3 1.4794E-11 65.022 1 1 0.70823 1.0207 8.8915 2 Median 0.73641 0.95853 NaN 1 0 Median 0.68113 1.087 NaN 1 0 Median 222250000 128810000 93438000 41575000 24622000 16953000 180680000 104190000 76484000 1841 967 1993 2986;2987 4848;4849 4848 2 NEDRGEEEAESSISSTSNEQLK LHQRFLREGRFWKSKNEDRGEEEAESSISS EAESSISSTSNEQLKVTQEPKKKKKKKKK_ K N E L K V 1 1 2 1 0 1 6 1 0 1 1 1 0 0 0 5 1 0 0 0 0 0 22 1 2438.0681 Q6PJR5;B7Z3Z1;Q5UGI2;A0A0A0MRY2;Q5BJG6;B7Z3W2;B0QZE2;B7Z2J6;E7ENI9;J3QKD2;Q15326 Q6PJR5 327 348 ZMYND11 Zinc finger MYND domain-containing protein 11 yes no 3 8.2803E-06 39.288 1 1 0.80958 1.0835 23.964 2 Median 0.98808 1.2836 NaN 1 0 Median 0.66332 0.9146 NaN 1 0 Median 28157000 14626000 13531000 14960000 6659400 8300500 13197000 7966500 5230800 1842 217 1994 2988;2989 4850;4851;4852 4851 3 NEEKISL LKKEKMNLLKLIDKKNEEKISL________ LLKLIDKKNEEKISL_______________ K N E S L - 0 0 1 0 0 0 2 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 7 1 831.4338 J3QSH8 J3QSH8 27 33 TSNAXIP1 yes yes 1 0.0009543 59.641 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1843 687 1995 2990;2991 4853;4854 4854 1019 0 NEEPSEEEIDAPK IEKKVVSSKTKKVTKNEEPSEEEIDAPKPK TKNEEPSEEEIDAPKPKKMKKEKEMNGETR K N E P K P 1 0 1 1 0 0 5 0 0 1 0 1 0 0 2 1 0 0 0 0 0 0 13 0 1485.6471 Q9NR30 Q9NR30 117 129 DDX21 Nucleolar RNA helicase 2 yes yes 2 0.00012992 86.467 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1844 934 1996 2992 4855;4856 4856 1648 0 NEEPSEEEIDAPKPK IEKKVVSSKTKKVTKNEEPSEEEIDAPKPK NEEPSEEEIDAPKPKKMKKEKEMNGETREK K N E P K K 1 0 1 1 0 0 5 0 0 1 0 2 0 0 3 1 0 0 0 0 0 0 15 1 1710.7948 Q9NR30 Q9NR30 117 131 DDX21 Nucleolar RNA helicase 2 yes yes 2;3 8.0677E-35 127.36 2 4 0.43417 0.53326 NaN 1 Median NaN NaN NaN 0 0 Median 0.43417 0.53326 NaN 1 0 Median 54300000 46489000 7811600 0 0 0 54300000 46489000 7811600 1845 934 1997;1998 2993;2994;2995;2996;2997;2998 4857;4858;4859;4860;4861;4862;4863;4864;4865;4866;4867;4868;4869;4870;4871;4872;4873;4874 4862 1648 3 NEEPVRSPERR ENRKPVSFRQRISTKNEEPVRSPERRDRKA ISTKNEEPVRSPERRDRKASANARKRKHSP K N E R R D 0 3 1 0 0 0 3 0 0 0 0 0 0 0 2 1 0 0 0 1 0 0 11 2 1367.6906 Q58EY4;Q92922;Q05BW5;Q05CR1;B4DYQ1 Q58EY4 304 314 SMARCC1 SWI/SNF complex subunit SMARCC1 yes no 2;3 0.0017641 59.248 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1846 839 1999 2999;3000;3001 4875;4876;4877 4877 1388 0 NEFISEYCGELISQDEADRR DVAGWGTFIKESVQKNEFISEYCGELISQD EYCGELISQDEADRRGKVYDKYMSSFLFNL K N E R R G 1 2 1 2 1 1 4 1 0 2 1 0 0 1 0 2 0 0 1 0 0 0 20 1 2430.0758 A0A0A0MSY9;Q92800 A0A0A0MSY9 627 646 EZH1 Histone-lysine N-methyltransferase EZH1 yes no 3 6.7747E-08 46.663 1 1 0.82073 1.1856 5.9093 2 Median 0.96014 1.2362 NaN 1 0 Median 0.70157 1.1371 NaN 1 0 Median 25453000 13885000 11568000 9308200 4786700 4521500 16145000 9098700 7046300 1847 223 2000 3002;3003 4878;4879;4880;4881;4882;4883 4880 6 NEKPTQSVSSPEATSGSTGSVEK VRGQDRLIISTPNQRNEKPTQSVSSPEATS SSPEATSGSTGSVEKKQQRRSIRTRSESEK R N E E K K 1 0 1 0 0 1 3 2 0 0 0 2 0 0 2 6 3 0 0 2 0 0 23 1 2306.0874 Q9BZ95;H0YE68 Q9BZ95 552 574 WHSC1L1 Histone-lysine N-methyltransferase NSD3 yes no 3 9.0905E-11 50.705 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1848 923 2001 3004 4884 4884 1606 0 NENEEILERPAQLANAR EGFGHRPHKDLWASKNENEEILERPAQLAN NEEILERPAQLANARETPHSPGVEDAPIAK K N E A R E 3 2 3 0 0 1 4 0 0 1 2 0 0 0 1 0 0 0 0 0 0 0 17 1 1965.9868 B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2;F8VQE1 B4DN52 388 404 LIMA1 LIM domain and actin-binding protein 1 yes no 3 0.0062891 33.697 1 0.92362 1.1884 NaN 1 Median 0.92362 1.1884 NaN 1 0 Median NaN NaN NaN 0 0 Median 8888700 5290400 3598300 8888700 5290400 3598300 0 0 0 1849 485 2002 3005 4885 4885 0 NENTEGSPQEDGVELEGLK EMKAEAEKKNKKKIKNENTEGSPQEDGVEL EGSPQEDGVELEGLKQRLEKKQKREPGTKT K N E L K Q 0 0 2 1 0 1 5 3 0 0 2 1 0 0 1 1 1 0 0 1 0 0 19 0 2043.9233 P11388 P11388 1241 1259 TOP2A DNA topoisomerase 2-alpha yes yes 2;3 0 345.14 6 8 0.89489 1.1027 NaN 1 Median NaN NaN NaN 0 0 Median 0.89489 1.1027 NaN 1 0 Median 23264000 12625000 10640000 0 0 0 23264000 12625000 10640000 1850 734 2003;2004;2005 3006;3007;3008;3009;3010;3011;3012;3013;3014;3015;3016;3017;3018;3019 4886;4887;4888;4889;4890;4891;4892;4893;4894;4895;4896;4897;4898;4899;4900;4901;4902;4903;4904;4905;4906;4907;4908;4909;4910;4911;4912;4913;4914;4915;4916;4917 4895 1141;1961 3 NETGLLSSIKK EVDDSLPSGGEKPSKNETGLLSSIKKFIKG KPSKNETGLLSSIKKFIKGSTPKEERENPS K N E K K F 0 0 1 0 0 0 1 1 0 1 2 2 0 0 0 2 1 0 0 0 0 0 11 1 1188.6714 A0A024R5Q8;Q05D32;H0YMH7;H0YNU2;H0YNW9 A0A024R5Q8 44 54 CTDSPL2 CTD small phosphatase-like protein 2 yes no 2 0.0001269 70.089 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1851 72 2006 3020 4918 4918 98 0 NEVTLEFHQNDDAEVSLMEVR FEIPLSNVSQCTTGKNEVTLEFHQNDDAEV FHQNDDAEVSLMEVRFYVPPTQEDGVDPVE K N E V R F 1 1 2 2 0 1 4 0 1 0 2 0 1 1 0 1 1 0 0 3 0 0 21 0 2474.1384 A0A024R4Z6;Q08945;E9PMD4;Q59GH7;E9PPZ7 A0A024R4Z6 144 164 SSRP1 FACT complex subunit SSRP1 yes no 3 4.0749E-16 79.143 2 0.68652 0.97101 0.13257 2 Median NaN NaN NaN 0 0 Median 0.68652 0.97101 0.13257 2 0 Median 277300000 168950000 108340000 0 0 0 277300000 168950000 108340000 1852 65 2007 3021;3022 4919;4920;4921 4921 13 3 NFDFEGSLSPVIAPK MNMMGYNTDRLAWTRNFDFEGSLSPVIAPK NFDFEGSLSPVIAPKKARPSETGSDDDWEY R N F P K K 1 0 1 1 0 0 1 1 0 1 1 1 0 2 2 2 0 0 0 1 0 0 15 0 1619.8195 H0Y564;Q9H1A4 H0Y564 215 229 ANAPC1 Anaphase-promoting complex subunit 1 yes no 2 2.4779E-05 65.805 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1853 649 2008 3023 4922;4923;4924 4924 980 0 NFFNELSHK VLLIDPEPQIAALAKNFFNELSHKGNAIYN IAALAKNFFNELSHKGNAIYNLLPDIISRL K N F H K G 0 0 2 0 0 0 1 0 1 0 1 1 0 2 0 1 0 0 0 0 0 0 9 0 1134.5458 Q15021;B4E0B7;B3KY03;B3KMS0 Q15021 1151 1159 NCAPD2 Condensin complex subunit 1 yes no 2 5.5123E-08 100.02 1 0.4487 0.56393 NaN 1 Median NaN NaN NaN 0 0 Median 0.4487 0.56393 NaN 1 0 Median 52080000 36144000 15935000 0 0 0 52080000 36144000 15935000 1854 820 2009 3024 4925;4926 4926 2 NFGSYVTHETK FDKKYNPTWHCIVGRNFGSYVTHETKHFIY IVGRNFGSYVTHETKHFIYFYLGQVAILLF R N F T K H 0 0 1 0 0 0 1 1 1 0 0 1 0 1 0 1 2 0 1 1 0 0 11 0 1281.599 Q6FGH9;P63167;Q96FJ2 Q6FGH9 61 71 DNCL1;DYNLL1;DYNLL2 Dynein light chain 1, cytoplasmic;Dynein light chain 2, cytoplasmic yes no 2 0.0037462 84.06 1 1.0608 1.3332 NaN 1 Median NaN NaN NaN 0 0 Median 1.0608 1.3332 NaN 1 0 Median 51865000 25705000 26160000 0 0 0 51865000 25705000 26160000 1855 792 2010 3025 4927;4928 4928 2 NFILDQTNVSAAAQR QCLGKFIEIAARKKRNFILDQTNVSAAAQR NFILDQTNVSAAAQRRKMCLFAGFQRKAVV R N F Q R R 3 1 2 1 0 2 0 0 0 1 1 0 0 1 0 1 1 0 0 1 0 0 15 0 1646.8376 Q96BA7;B3KX72;Q00839;B4DLR3;Q7Z4Q5 Q96BA7 473 487 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U yes no 2 1.0301E-06 89.013 1 2.0845 2.6816 NaN 1 Median NaN NaN NaN 0 0 Median 2.0845 2.6816 NaN 1 0 Median 15121000 4882300 10239000 0 0 0 15121000 4882300 10239000 1856 453 2011 3026 4929;4930 4930 2 NFQIIEEDAALVEIGPR HVFTFTILDNRIWFRNFQIIEEDAALVEIG QIIEEDAALVEIGPRFVLNLIKIFQGSFGG R N F P R F 2 1 1 1 0 1 3 1 0 3 1 0 0 1 1 0 0 0 0 1 0 0 17 0 1912.9894 Q8TDN6;A0JLQ5 Q8TDN6 219 235 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog yes no 2 0.0065676 35.037 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 5498400 5498400 0 0 0 0 5498400 5498400 0 1857 890 2012 3027 4931 4931 1 NFQTAHR EGDDQEGEKKRKGGRNFQTAHRRNMLKGQH EKKRKGGRNFQTAHRRNMLKGQHEKEAADR R N F H R R 1 1 1 0 0 1 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 7 0 872.4253 O75475;V9GYT7 O75475 293 299 PSIP1 PC4 and SFRS1-interacting protein yes no 2 3.2186E-06 100.07 1 0.61329 0.84643 NaN 1 Median NaN NaN NaN 0 0 Median 0.61329 0.84643 NaN 1 0 Median 54679000 35090000 19590000 0 0 0 54679000 35090000 19590000 1858 710 2013 3028 4932;4933 4933 2 NFSNSPGPYVFCITEK GKKLGISFLEDLTDRNFSNSPGPYVFCITE FSNSPGPYVFCITEKGVVKE__________ R N F E K G 0 0 2 0 1 0 1 1 0 1 0 1 0 2 2 2 1 0 1 1 0 0 16 0 1858.856 D6RJE1;D6RE69;D6R9I1;A0A1B0GV48;D6RBC4;B4DYR8;Q8NAP3 D6RJE1 126 141 ZBTB38 Zinc finger and BTB domain-containing protein 38 yes no 2 0.00026082 54.501 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1859 287 2014 3029 4934 4934 433 0 NFTMDTESSVYNFEGEDYREK EMNEKLSKMGESSLRNFTMDTESSVYNFEG ESSVYNFEGEDYREKQKIAFTEWIEPPKRE R N F E K Q 0 1 2 2 0 0 4 1 0 0 0 1 1 2 0 2 2 0 2 1 0 0 21 1 2560.07 B7ZAX9;B4DZC0;O60264 B7ZAX9 645 665 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes no 3 4.696E-09 57.496 1 1 2.2691 3.2097 8.2974 2 Median 2.3743 3.0268 NaN 1 0 Median 2.1687 3.4037 NaN 1 0 Median 94964000 30247000 64717000 7101200 2388100 4713100 87863000 27858000 60004000 1860 510 2015 3030;3031 4935;4936;4937 4937 98 3 NFYVEHPEVAR RKKKWDLSELPKFEKNFYVEHPEVARLTPY KFEKNFYVEHPEVARLTPYEVDELRRKKEI K N F A R L 1 1 1 0 0 0 2 0 1 0 0 0 0 1 1 0 0 0 1 2 0 0 11 0 1359.6571 Q59F66;Q92841;B4DZQ7 Q59F66 135 145 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 2 0.0026694 86.624 1 1.3567 1.8152 NaN 1 Median NaN NaN NaN 0 0 Median 1.3567 1.8152 NaN 1 0 Median 9970900 4380300 5590600 0 0 0 9970900 4380300 5590600 1861 840 2016 3032 4938;4939 4939 2 NGGHFVISIK DQTRIVALNAHTFLRNGGHFVISIKANCID HTFLRNGGHFVISIKANCIDSTASAEAVFA R N G I K A 0 0 1 0 0 0 0 2 1 2 0 1 0 1 0 1 0 0 0 1 0 0 10 0 1070.5873 Q96BS4;P22087;M0QXL5;M0R2Q4;B4DLD4;M0R0P1;M0R299 Q96BS4 195 204 FBL rRNA 2-O-methyltransferase fibrillarin yes no 2 0.0037096 66.758 1 0.37692 0.47303 NaN 1 Median NaN NaN NaN 0 0 Median 0.37692 0.47303 NaN 1 0 Median 10131000 8100600 2030100 0 0 0 10131000 8100600 2030100 1862 747 2017 3033 4940 4940 1 NGIDILVGTPGR FYGGTPYGGQFERMRNGIDILVGTPGRIKD RMRNGIDILVGTPGRIKDHIQNGKLDLTKL R N G G R I 0 1 1 1 0 0 0 3 0 2 1 0 0 0 1 0 1 0 0 1 0 0 12 0 1210.667 Q9NR30;Q53FI9;B4DED6;B4DW97;A0A087WVC1;K0J110;Q9BQ39 Q9NR30 307 318 DDX21;DDX50;mcdrh Nucleolar RNA helicase 2;ATP-dependent RNA helicase DDX50 yes no 2 2.0504E-08 80.522 1 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1863 934 2018 3034;3035;3036 4941;4942;4943 4941 2047 0 NGLSLAALK VSELITKAVAASKERNGLSLAALKKALAAG AASKERNGLSLAALKKALAAGGYDVEKNNS R N G L K K 2 0 1 0 0 0 0 1 0 0 3 1 0 0 0 1 0 0 0 0 0 0 9 0 885.52837 P16401 P16401 58 66 HIST1H1B Histone H1.5 yes yes 2 0.015707 63.419 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1864 738 2019 3037 4944 4944 1 NGLSLAALKK VSELITKAVAASKERNGLSLAALKKALAAG ASKERNGLSLAALKKALAAGGYDVEKNNSR R N G K K A 2 0 1 0 0 0 0 1 0 0 3 2 0 0 0 1 0 0 0 0 0 0 10 1 1013.6233 P16401 P16401 58 67 HIST1H1B Histone H1.5 yes yes 2 0.0094838 59.931 1 0.30842 0.37706 NaN 1 Median NaN NaN NaN 0 0 Median 0.30842 0.37706 NaN 1 0 Median 8659800 6521100 2138600 0 0 0 8659800 6521100 2138600 1865 738 2020 3038 4945 4945 1 NGPLEVAGAAVSAGHGLPAK GGKEFVEAVLELRKKNGPLEVAGAAVSAGH VAGAAVSAGHGLPAKFVIHCNSPVWGADKC K N G A K F 5 0 1 0 0 0 1 4 1 0 2 1 0 0 2 1 0 0 0 2 0 0 20 0 1814.9639 O75367;Q59FH0;B4DJC3 O75367 252 271 H2AFY Core histone macro-H2A.1;Histone H2A yes no 2;3 3.0069E-10 50.404 2 0.66444 0.82836 3.6561 2 Median NaN NaN NaN 0 0 Median 0.66444 0.82836 3.6561 2 0 Median 31323000 19930000 11393000 0 0 0 31323000 19930000 11393000 1866 709 2021 3039;3040 4946;4947;4948;4949 4946 4 NGTLILSPVDIK SILSNGRIGQVGKFKNGTLILSPVDIKKIN KFKNGTLILSPVDIKKINSSRVAK______ K N G I K K 0 0 1 1 0 0 0 1 0 2 2 1 0 0 1 1 1 0 0 1 0 0 12 0 1268.734 Q5TBI2;Q8NDD1 Q5TBI2 236 247 C1orf131 Uncharacterized protein C1orf131 yes no 2 8.3055E-30 126.1 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1867 847 2022 3041;3042;3043 4950;4951;4952;4953 4950 1399 0 NGTLILSPVDIKK SILSNGRIGQVGKFKNGTLILSPVDIKKIN FKNGTLILSPVDIKKINSSRVAK_______ K N G K K I 0 0 1 1 0 0 0 1 0 2 2 2 0 0 1 1 1 0 0 1 0 0 13 1 1396.829 Q5TBI2;Q8NDD1 Q5TBI2 236 248 C1orf131 Uncharacterized protein C1orf131 yes no 2 7.4271E-103 161.21 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1868 847 2023 3044;3045 4954;4955;4956 4954 1399 0 NGTSGSDSPGQAVEAEEIVK TIFSPVFNFFSPANKNGTSGSDSPGQAVEA SDSPGQAVEAEEIVKQLDMEQVDEITTSTT K N G V K Q 2 0 1 1 0 1 3 3 0 1 0 1 0 0 1 3 1 0 0 2 0 0 20 0 1973.9178 A0A024R5Q8;Q05D32 A0A024R5Q8 158 177 CTDSPL2 CTD small phosphatase-like protein 2 yes no 2 3.3609E-124 160.3 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1869 72 2024;2025 3046;3047;3048 4957;4958;4959;4960;4961;4962 4958 99;100;101;1791 0 NHEEEMNALR MQIESLKEELAYLKKNHEEEMNALRGQVGG AYLKKNHEEEMNALRGQVGGDVNVEMDAAP K N H L R G 1 1 2 0 0 0 3 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 10 0 1241.5459 CON__P02533;P02533;A0A024R1X6;Q14666;F5GWP8;CON__Q04695;CON__Q9QWL7;CON__Q6IFX2;Q04695;K7ESE1;K7EPJ9 CON__P02533 252 261 KRT14;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 yes no 2 6.0515E-05 95.608 1 0.16679 0.21303 NaN 1 Median NaN NaN NaN 0 0 Median 0.16679 0.21303 NaN 1 0 Median 16994000 14644000 2350300 0 0 0 16994000 14644000 2350300 + 1870 571 2026 3049 4963 4963 112 1 NHLSPQQGGATPQVPSPCCR WGRHRGRRRGLAHPKNHLSPQQGGATPQVP QQGGATPQVPSPCCRFDSPRGPPPPRLGLL K N H C R F 1 1 1 0 2 3 0 2 1 0 1 0 0 0 4 2 1 0 0 1 0 0 20 0 2190.0059 A0A087X0R7;Q9H4L4 A0A087X0R7 96 115 SENP3-EIF4A1;SENP3 Sentrin-specific protease 3 yes no 3 3.6745E-16 80.082 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1871 204 2027 3050 4964 4964 286 0 NHSGNDERDEEDEERESK YIENMSRGIYKLYCKNHSGNDERDEEDEER GNDERDEEDEERESKSRGKVEIDQQQLTQQ K N H S K S 0 2 2 3 0 0 6 1 1 0 0 1 0 0 0 2 0 0 0 0 0 0 18 2 2173.8744 Q8IWS0;A0A0D9SGE8;B4E138 Q8IWS0 328 345 PHF6 PHD finger protein 6 yes no 4 0.00014065 36.029 1 0.83293 1.0392 NaN 1 Median 0.83293 1.0392 NaN 1 0 Median NaN NaN NaN 0 0 Median 126180000 69969000 56212000 126180000 69969000 56212000 0 0 0 1872 874 2028 3051 4965 4965 1 NHSGSRTPPVALNSSR SSSDRSRSATPPATRNHSGSRTPPVALNSS HSGSRTPPVALNSSRMSCFSRPSMSPTPLD R N H S R M 1 2 2 0 0 0 0 1 1 0 1 0 0 0 2 4 1 0 0 1 0 0 16 1 1678.8499 A0A140VK53;Q9UQ35;O60382;A0AUK8 A0A140VK53 2098 2113 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 yes no 3 6.446E-07 62.739 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1873 284 2029 3052 4966 4966 407;1827 0 NHVDESPVEFPATR RHRPSPRSTRGRQGRNHVDESPVEFPATRS RNHVDESPVEFPATRSLRRRATASAGTPWP R N H T R S 1 1 1 1 0 0 2 0 1 0 0 0 0 1 2 1 1 0 0 2 0 0 14 0 1596.7532 Q9UBC3;Q59H79;Q2PJS8 Q9UBC3 131 144 DNMT3B DNA (cytosine-5)-methyltransferase 3B yes no 2 8.8004E-23 115.87 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1874 948 2030 3053;3054 4967;4968;4969;4970;4971 4970 1686 0 NIDDGTSDRPYSHALVAGIDR VLAGRYSGRKAVIVKNIDDGTSDRPYSHAL SDRPYSHALVAGIDRYPRKVTAAMGKKKIA K N I D R Y 2 2 1 4 0 0 0 2 1 2 1 0 0 0 1 2 1 0 1 1 0 0 21 1 2271.088 E4W6B6;B2R4D8;A0A024R1V4;K7ELC7;P61353 E4W6B6 28 48 RPL27 60S ribosomal protein L27 yes no 3;4 0.00010282 42.309 2 1 0.44896 0.72733 NaN 1 Median NaN NaN NaN 0 0 Median 0.44896 0.72733 NaN 1 0 Median 19253000 11048000 8205300 3165100 0 3165100 16088000 11048000 5040300 1875 37 2031 3055;3056;3057 4972;4973;4974;4975 4973 4 NIGNGIISSPLTGK SLPGRPSVIPDHSKKNIGNGIISSPLTGKR KNIGNGIISSPLTGKRQDSGTMKKPHTTEE K N I G K R 0 0 2 0 0 0 0 3 0 3 1 1 0 0 1 2 1 0 0 0 0 0 14 0 1369.7565 A0A075B784;A0A024R8V6;Q9P275;B3KMW2;Q9H9C5;E9PEW0;K7EMM6 A0A075B784 456 469 USP36;DUB1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 yes no 2 2.1768E-144 176.4 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1876 107 2032 3058;3059 4976;4977;4978 4976 161 0 NINMDNDLEVLTSSPTR SVTDNQKSTEEVDMKNINMDNDLEVLTSSP NMDNDLEVLTSSPTRNLNGAYLTEGSNGEV K N I T R N 0 1 3 2 0 0 1 0 0 1 2 0 1 0 1 2 2 0 0 1 0 0 17 0 1917.9102 B4DUS4;Q9Y5T5 B4DUS4 168 184 USP16 Ubiquitin carboxyl-terminal hydrolase 16 yes no 2 3.9817E-05 50.053 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1877 502 2033 3060 4979 4979 95 742;743 0 NINTFVETPVQK GKAMDTPKPAVSDEKNINTFVETPVQKLDL DEKNINTFVETPVQKLDLLGNLPGSKRQPQ K N I Q K L 0 0 2 0 0 1 1 0 0 1 0 1 0 1 1 0 2 0 0 2 0 0 12 0 1388.73 P46013 P46013 2399 2410 MKI67 Antigen KI-67 yes yes 2 2.7282E-13 111.79 1 2 1.0785 1.4363 NaN 1 Median NaN NaN NaN 0 0 Median 1.0785 1.4363 NaN 1 0 Median 4762600 2187600 2575000 0 0 0 4762600 2187600 2575000 1878 762 2034;2035 3061;3062;3063 4980;4981;4982 4980 1980 1 NIPSPGQLDPDTR VTKAFEEDIETPPTRNIPSPGQLDPDTRIP TRNIPSPGQLDPDTRIPVINLEDGTRLVGE R N I T R I 0 1 1 2 0 1 0 1 0 1 1 0 0 0 3 1 1 0 0 0 0 0 13 0 1408.6947 B4DIS0;A0A024R7V7;Q9P2D1 B4DIS0 813 825 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes no 2 0.00045978 64.439 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1879 96 2036 3064;3065 4983;4984;4985;4986 4983 136 0 NISHDTFGTTYGR LSMKMPKALKPKKKKNISHDTFGTTYGRIH KKNISHDTFGTTYGRIHMQKQDLSKLQTRK K N I G R I 0 1 1 1 0 0 0 2 1 1 0 0 0 1 0 1 3 0 1 0 0 0 13 0 1467.6743 A8K800;Q9H7B2 A8K800 253 265 RPF2 Ribosome production factor 2 homolog yes no 2;3 1.8966E-15 95.428 1 2 0.74426 0.97882 3.779 3 Median 0.79206 1.0121 NaN 1 0 Median 0.72684 0.95848 2.9702 2 0 Median 49647000 29382000 20265000 10248000 6326900 3921300 39399000 23055000 16343000 1880 371 2037 3066;3067;3068 4987;4988;4989;4990;4991;4992;4993 4992 7 NISKLSPPR ATPRLHITIPRRSKRNISKLSPPRIFQTVT PRRSKRNISKLSPPRIFQTVTNGLKKNQVV R N I P R I 0 1 1 0 0 0 0 0 0 1 1 1 0 0 2 2 0 0 0 0 0 0 9 1 1010.5873 Q6P0N0;G5E9K5;H7C1S6 Q6P0N0 360 368 MIS18BP1 Mis18-binding protein 1 yes no 2;3 6.2157E-07 88.187 3 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1881 858 2038 3069;3070;3071;3072;3073 4994;4995;4996;4997;4998;4999 4995 1423 0 NISMSVEGDYTYLR PVFGIATPFHIATIKNISMSVEGDYTYLRI KNISMSVEGDYTYLRINFYCPGSALGRNEG K N I L R I 0 1 1 1 0 0 1 1 0 1 1 0 1 0 0 2 1 0 2 1 0 0 14 0 1646.761 Q9Y5B9 Q9Y5B9 556 569 SUPT16H FACT complex subunit SPT16 yes yes 2 0.00043059 66.326 1 0.58598 0.76016 NaN 1 Median NaN NaN NaN 0 0 Median 0.58598 0.76016 NaN 1 0 Median 13732000 8324000 5408400 0 0 0 13732000 8324000 5408400 1882 967 2039 3074 5000;5001 5001 233 2 NISQELNMEQK DSSSSKEDENEAERKNISQELNMEQKNPKK AERKNISQELNMEQKNPKK___________ K N I Q K N 0 0 2 0 0 2 2 0 0 1 1 1 1 0 0 1 0 0 0 0 0 0 11 0 1332.6344 A0A0U1RRH6 A0A0U1RRH6 934 944 yes yes 2 0.0060951 60.157 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1883 275 2040 3075 5002 5002 56 374 0 NIVEAAAVR RCVPKDKAIKKFVIRNIVEAAAVRDISEAS KKFVIRNIVEAAAVRDISEASVFDAYVLPK R N I V R D 3 1 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 2 0 0 9 0 941.52943 A0A024RB14;P62854;Q5JNZ5;Q75MH1;Q76N57 A0A024RB14 43 51 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 yes no 2 0.013193 48.561 1 0.90037 1.1385 NaN 1 Median 0.90037 1.1385 NaN 1 0 Median NaN NaN NaN 0 0 Median 4477800 2477100 2000700 4477800 2477100 2000700 0 0 0 1884 136 2041 3076 5003 5003 1 NIYVLQELDNPGAK VFYGTEKDKNSVNFKNIYVLQELDNPGAKR KNIYVLQELDNPGAKRILELDQFKGQQGQK K N I A K R 1 0 2 1 0 1 1 1 0 1 2 1 0 0 1 0 0 0 1 1 0 0 14 0 1572.8148 B4DE32;B1AHC9;A0A024R1N4;P12956;B2RDN9 B4DE32 51 64 XRCC6 X-ray repair cross-complementing protein 6 yes no 2 0.0053118 46.592 1 0.48977 0.60857 NaN 1 Median NaN NaN NaN 0 0 Median 0.48977 0.60857 NaN 1 0 Median 2722600 1944900 777670 0 0 0 2722600 1944900 777670 1885 33 2042 3077 5004 5004 1 NKASPAVALPK YPVVKIRRLSLSPKKNKASPAVALPKRRCT SPKKNKASPAVALPKRRCTASVNYKEPTLA K N K P K R 3 0 1 0 0 0 0 0 0 0 1 2 0 0 2 1 0 0 0 1 0 0 11 1 1094.6448 B5BUA4;Q5FBB7;A0A024R2J4 B5BUA4 465 475 SGOL1 Shugoshin-like 1 yes no 2 8.7547E-05 97.463 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1886 529 2043 3078;3079 5005;5006;5007;5008;5009 5006 767 0 NKEEAAEYAK HKRRRIALKKQRTKKNKEEAAEYAKLLAKR QRTKKNKEEAAEYAKLLAKRMKEAKEKRQE K N K A K L 3 0 1 0 0 0 3 0 0 0 0 2 0 0 0 0 0 0 1 0 0 0 10 1 1151.5459 Q96DV6;A2A3R6;P62753;A2A3R5 Q96DV6 202 211 RPS6 40S ribosomal protein S6 yes no 2 4.7895E-96 160.77 1 0.46489 0.54637 NaN 1 Median NaN NaN NaN 0 0 Median 0.46489 0.54637 NaN 1 0 Median 239610000 162730000 76877000 0 0 0 239610000 162730000 76877000 1887 303 2044 3080 5010;5011 5011 2 NKLEDELK SPPALRSRQKNTSNKNKLEDELKDDAQSVE QKNTSNKNKLEDELKDDAQSVETLGKPKAK K N K L K D 0 0 1 1 0 0 2 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 8 1 987.52368 Q8WYP5;B3KRD0 Q8WYP5 2169 2176 AHCTF1 Protein ELYS yes no 2 1.2944E-10 98.582 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 8068600 8068600 0 0 0 0 8068600 8068600 0 1888 897 2045 3081;3082 5012;5013 5013 2 NKQPTPVNIR TTKMSLNERFTNMLKNKQPTPVNIRASMQQ TNMLKNKQPTPVNIRASMQQQQQLASARNR K N K I R A 0 1 2 0 0 1 0 0 0 1 0 1 0 0 2 0 1 0 0 1 0 0 10 1 1165.6568 A0A087X1B7;X6R700;Q9Y3Y2 A0A087X1B7 29 38 CHTOP Chromatin target of PRMT1 protein yes no 2 0.019844 40.589 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1889 206 2046 3083 5014 5014 1811 0 NKQPVTDPLLTPVEK ARTPLEQEIFNLLHKNKQPVTDPLLTPVEK NKQPVTDPLLTPVEKASLRAMSLEEAKMRR K N K E K A 0 0 1 1 0 1 1 0 0 0 2 2 0 0 3 0 2 0 0 2 0 0 15 1 1677.9301 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 195 209 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes no 3 0.0026423 46.621 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1890 919 2047 3084 5015 5015 2034 0 NKYEDEINK DSELKNMQDMVEDYRNKYEDEINKRTNAEN MVEDYRNKYEDEINKRTNAENEFVTIKKDV R N K N K R 0 0 2 1 0 0 2 0 0 1 0 2 0 0 0 0 0 0 1 0 0 0 9 1 1151.5459 CON__P05787;P05787;Q969I0;F8VUG2;F8W1U3;CON__H-INV:HIT000292931;CON__Q8VED5;CON__Q9H552;CON__P13647;P13647;B4E1T1;B4DL32;B4DRR0;B4DRU6;CON__P48668;CON__P04259;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;F8W0C6;B4DWU6;B2R853;CON__Q5XKE5;Q5XKE5;CON__Q5XQN5;CON__Q922U2;H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;H6VRG2;H6VRF9;CON__P04264;CON__H-INV:HIT000016045;F8VP67;CON__Q6IFZ6 H6VRG3 268 276 KRT8;KRT5;KRT6C;KRT6A;KRT79;KRT1 Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 79;Keratin, type II cytoskeletal 1 no no 2 0.00073369 89.08 1 0.18509 0.22146 NaN 1 Median NaN NaN NaN 0 0 Median 0.18509 0.22146 NaN 1 0 Median 79554000 66896000 12658000 0 0 0 79554000 66896000 12658000 + 1891 670;584;580;575 2048 3085 5016;5017 5017 2 NKYEDEINKR DSELKNMQDMVEDYRNKYEDEINKRTNAEN VEDYRNKYEDEINKRTNAENEFVTIKKDVD R N K K R T 0 1 2 1 0 0 2 0 0 1 0 2 0 0 0 0 0 0 1 0 0 0 10 2 1307.647 CON__P05787;P05787;Q969I0;F8VUG2;F8W1U3;CON__Q8VED5;CON__P13647;P13647;B4E1T1;B4DL32;B4DRR0;B4DRU6;CON__P48668;CON__P04259;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;F8W0C6;B4DWU6;B2R853;CON__Q5XQN5;CON__Q922U2;H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;H6VRG2;H6VRF9;CON__P04264;CON__H-INV:HIT000016045;F8VP67;CON__Q6IFZ6 H6VRG3 268 277 KRT8;KRT5;KRT6C;KRT6A;KRT1 Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 1 no no 2;3 1.7257E-64 149.33 2 1 0.058377 0.076024 4.7385 2 Median 0.061692 0.073519 NaN 1 0 Median 0.05524 0.078615 NaN 1 0 Median 137100000 128190000 8902100 108560000 101390000 7171800 28533000 26803000 1730300 + 1892 670;584;580;575 2049 3086;3087;3088 5018;5019;5020;5021;5022;5023;5024;5025 5025 8 NKYEDEINRR EQGLRTMQDVVEDFKNKYEDEINRRTAAEN VEDFKNKYEDEINRRTAAENEFVVLKKDVD K N K R R T 0 2 2 1 0 0 2 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 10 2 1335.6531 CON__P08729 CON__P08729 178 187 yes yes 3 0.013042 33.225 1 0.26252 0.3253 NaN 1 Median 0.26252 0.3253 NaN 1 0 Median NaN NaN NaN 0 0 Median 13389000 10098000 3291200 13389000 10098000 3291200 0 0 0 + 1893 576 2050 3089 5026;5027;5028 5026 3 NLDIERPTYTNLNR AFMVDNEAIYDICRRNLDIERPTYTNLNRL RNLDIERPTYTNLNRLISQIVSSITASLRF R N L N R L 0 2 3 1 0 0 1 0 0 1 2 0 0 0 1 0 2 0 1 0 0 0 14 1 1717.8747 B3KT06;B3KPS3;Q1ZYQ1;A8JZY9;Q13748;Q71U36;P68363;C9JDS9;F8VQQ4;B4DDU2;Q9UQM3;B4DQK4;Q53GA7;F5H5D3;B7Z1K5;P68366;Q9BQE3;Q6PEY2;F8VVB9;C9J2C0;Q7Z3M3;Q9NY65 B3KT06 181 194 TUBA2;TUBA3C;TUBA1A;TUBA1B;TUBA4A;TUBA1C;TUBA3E;TUBA8;DKFZp686L04275 Tubulin alpha-3C/D chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1C chain;Tubulin alpha-3E chain;Tubulin alpha-8 chain yes no 3 0.0012071 55.724 1 1 1.0618 1.5503 189.78 2 Median 0.32153 0.40516 NaN 1 0 Median 3.5067 5.9324 NaN 1 0 Median 30641000 8479300 22162000 4131200 2981400 1149800 26510000 5497900 21012000 1894 334 2051 3090;3091 5029;5030 5030 2 NLEETSPVTQAER VHKMNAPYKYPLNRKNLEETSPVTQAERTP RKNLEETSPVTQAERTPSVEKPYRCDDCGK K N L E R T 1 1 1 0 0 1 3 0 0 0 1 0 0 0 1 1 2 0 0 1 0 0 13 0 1472.7107 Q9Y5A5;B3KN61;A0A024R3M3;O95125 Q9Y5A5 360 372 ZNF202 Zinc finger protein 202 yes no 2 0.0022312 59.185 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1895 54 2052 3092;3093 5031;5032;5033;5034 5033 56;1781 0 NLGSPTQVISKPESK GGHKERPTVMLFPFRNLGSPTQVISKPESK NLGSPTQVISKPESKEEHAIYTADLAMGTR R N L S K E 0 0 1 0 0 1 1 1 0 1 1 2 0 0 2 3 1 0 0 1 0 0 15 1 1583.8519 Q86TZ8;B4DFJ1;Q9BSI4 Q86TZ8 78 92 TINF2 TERF1-interacting nuclear factor 2 yes no 2;3 1.394E-58 141.99 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1896 463 2053 3094;3095;3096;3097 5035;5036;5037;5038;5039;5040;5041;5042;5043;5044;5045 5042 672 0 NLLSDCSVVSTSLEDK MFESTAADLGSVVRKNLLSDCSVVSTSLED LLSDCSVVSTSLEDKQQVPSEDSMEKVKVY K N L D K Q 0 0 1 2 1 0 1 0 0 0 3 1 0 0 0 4 1 0 0 2 0 0 16 0 1765.8404 O95235;D6RBN1;D6R9E4 O95235 38 53 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein yes no 2 2.0667E-59 139.08 3 2 0.35534 0.46584 NaN 1 Median NaN NaN NaN 0 0 Median 0.35534 0.46584 NaN 1 0 Median 6530200 5028800 1501400 0 0 0 6530200 5028800 1501400 1897 716 2054;2055;2056 3098;3099;3100;3101;3102 5046;5047;5048;5049;5050;5051;5052;5053;5054;5055 5047 1078;1079 2 NLQDPVPKESPK ASKKKQITPSQCKERNLQDPVPKESPKSCF KERNLQDPVPKESPKSCFFDSRSKSLPSPH R N L P K S 0 0 1 1 0 1 1 0 0 0 1 2 0 0 3 1 0 0 0 1 0 0 12 1 1350.7143 A0A087X0P0;Q02224 A0A087X0P0 2593 2604 CENPE Kinesin-like protein;Centromere-associated protein E yes no 2 0.020283 59.116 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1898 203 2057 3103;3104 5056;5057 5057 285 0 NLQLFMENK IRYYNKVPVEKRVFKNLQLFMENKQPEDDL EKRVFKNLQLFMENKQPEDDLFDRLNTGIL K N L N K Q 0 0 2 0 0 1 1 0 0 0 2 1 1 1 0 0 0 0 0 0 0 0 9 0 1135.5696 P11387;B9EG90;B7Z9E8;B4DYD2;E5KMK7;E5KMK6;E5KMK5;Q969P6;E5RIC7;B4E061 P11387 550 558 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial yes no 2 0.0089437 58.981 1 0.65611 0.86634 NaN 1 Median NaN NaN NaN 0 0 Median 0.65611 0.86634 NaN 1 0 Median 13873000 8336900 5535700 0 0 0 13873000 8336900 5535700 1899 733 2058 3105 5058;5059;5060 5060 156 3 NLQTVNVDEN KLYTLVTYVPVTTFKNLQTVNVDEN_____ VTTFKNLQTVNVDEN_______________ K N L E N - 0 0 3 1 0 1 1 0 0 0 1 0 0 0 0 0 1 0 0 2 0 0 10 0 1144.536 B2R4C1;P62899;Q76N53 B2R4C1 116 125 RPL31 60S ribosomal protein L31 yes no 1 9.3205E-86 169.41 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 10142000 0 0 10142000 0 0 0 0 0 1900 398 2059 3106 5061 5061 1 NLSELQDTSLQQLVSQR TDEGKEINEKSSQLKNLSELQDTSLQQLVS SELQDTSLQQLVSQRHSTPQNKNAVSVHSN K N L Q R H 0 1 1 1 0 4 1 0 0 0 4 0 0 0 0 3 1 0 0 1 0 0 17 0 1958.0069 J3KP30;B7Z854;Q5QJE6 J3KP30 322 338 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 yes no 2 2.1201E-05 50.608 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1901 545 2060 3107 5062 5062 792 0 NLSESPVITK GGIKGIGKTSTNSSKNLSESPVITKAKEGC TNSSKNLSESPVITKAKEGCQSDSMRQEQS K N L T K A 0 0 1 0 0 0 1 0 0 1 1 1 0 0 1 2 1 0 0 1 0 0 10 0 1086.5921 F5GXF5;E7ETD6;Q12830 F5GXF5 1164 1173 BPTF Nucleosome-remodeling factor subunit BPTF yes no 2 7.2131E-62 124.39 1 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1902 607 2061 3108;3109;3110 5063;5064;5065;5066;5067 5067 908 0 NLSFNELYPSGTLK EQEKLEAQDSGEEARNLSFNELYPSGTLKL RNLSFNELYPSGTLKLQYNFDTIDQQFCDL R N L L K L 0 0 2 0 0 0 1 1 0 0 3 1 0 1 1 2 1 0 1 0 0 0 14 0 1581.8039 Q8WYP5;B3KTD2;B3KVE5;B3KRD0 Q8WYP5 1539 1552 AHCTF1 Protein ELYS yes no 2 2.9006E-07 97.273 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1903 897 2062;2063 3111;3112;3113 5068;5069;5070;5071;5072;5073;5074 5068 1524;1525 0 NLSPGAVESDVR DQTVRVWDISGLRKKNLSPGAVESDVRGIT RKKNLSPGAVESDVRGITGVDLFGTTDAVV K N L V R G 1 1 1 1 0 0 1 1 0 0 1 0 0 0 1 2 0 0 0 2 0 0 12 0 1242.6204 P53621 P53621 171 182 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 4.7163E-30 127.3 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1904 776 2064 3114;3115 5075;5076;5077;5078;5079;5080;5081 5079 1258 0 NLSPSFSR EDQKLKFLRLMGGFKNLSPSFSRPASTIAR RLMGGFKNLSPSFSRPASTIARPNMALGKK K N L S R P 0 1 1 0 0 0 0 0 0 0 1 0 0 1 1 3 0 0 0 0 0 0 8 0 906.45593 Q1ED39;H3BNU8 Q1ED39 385 392 KNOP1 Lysine-rich nucleolar protein 1 yes no 2 7.2215E-28 123.86 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1905 829 2065 3116;3117 5082;5083;5084;5085;5086;5087;5088 5087 1368 0 NMGLSPPASSTSTSSTCR PQDLASTSRAREGLRNMGLSPPASSTSTSS LSPPASSTSTSSTCRAEAPRDRDRDRDRDR R N M C R A 1 1 1 0 1 0 0 1 0 0 1 0 1 0 2 6 3 0 0 0 0 0 18 0 1839.8091 Q9HC52;C9JM54;C9J6K3 Q9HC52 126 143 CBX8 Chromobox protein homolog 8 yes no 2 2.8117E-31 117.84 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1906 930 2066 3118;3119 5089;5090;5091;5092 5091 217 1628 0 NMQDMVEDYR DQLKSDQSRLDSELKNMQDMVEDYRNKYED DSELKNMQDMVEDYRNKYEDEINKRTNAEN K N M Y R N 0 1 1 2 0 1 1 0 0 0 0 0 2 0 0 0 0 0 1 1 0 0 10 0 1299.5224 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;H6VRG2;H6VRF9;CON__P04264 H6VRG3 258 267 KRT1 Keratin, type II cytoskeletal 1 yes no 2 2.3693E-08 78.934 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 9464300 9464300 0 0 0 0 9464300 9464300 0 + 1907 670 2067 3120;3121 5093;5094 5094 142;143 2 NNASTDYDLSDK KIGQGYLIKDGKLIKNNASTDYDLSDKSIN LIKNNASTDYDLSDKSINPLGGFVHYGEVT K N N D K S 1 0 2 3 0 0 0 0 0 0 1 1 0 0 0 2 1 0 1 0 0 0 12 0 1341.5685 B3KS36;P39023;B5MCW2;Q9NY85;G5E9G0;Q8TBW1;Q49AJ9;Q9BT63 B3KS36 252 263 RPL3;rpl3 60S ribosomal protein L3 yes no 2 0.0011867 81.017 2 1 0.66106 0.81284 9.7337 2 Median 0.62688 0.75877 NaN 1 0 Median 0.6971 0.87075 NaN 1 0 Median 47315000 28554000 18761000 10455000 6556600 3898800 36860000 21998000 14862000 1908 443 2068 3122;3123;3124 5095;5096;5097;5098 5096 4 NNFAVGYR GYQMTFDSAKSKLTRNNFAVGYRTGDFQLH AKSKLTRNNFAVGYRTGDFQLHTN______ R N N Y R T 1 1 2 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 1 1 0 0 8 0 939.45626 Q5JSD2;Q5JSD1;A0A0A0MR02;A0A024QZT0;A0A024QZN9;P45880;B4DKM5 Q5JSD2 178 185 VDAC2 Voltage-dependent anion-selective channel protein 2 yes no 2 0.0087815 55.504 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3336900 0 3336900 0 0 0 3336900 0 3336900 1909 7 2069 3125 5099 5099 1 NNREQVEVVEFHSNK GPEILAAAVPPSSLKNNREQVEVVEFHSNK NNREQVEVVEFHSNKKRKLTPDHNKNTKAR K N N N K K 0 1 3 0 0 1 3 0 1 0 0 1 0 1 0 1 0 0 0 3 0 0 15 1 1827.8864 Q5TBI2;Q8NDD1;Q5TBH9;B4E0F7 Q5TBI2 106 120 C1orf131 Uncharacterized protein C1orf131 yes no 3 0.00074502 46.89 1 1.0587 1.3391 NaN 1 Median 1.0587 1.3391 NaN 1 0 Median NaN NaN NaN 0 0 Median 4453300 2392500 2060800 4453300 2392500 2060800 0 0 0 1910 847 2070 3126 5100;5101;5102 5102 3 NNSNTCNIENELEDSRK NEKQQNASESKLELRNNSNTCNIENELEDS SNTCNIENELEDSRKTTACTELRDKIACNG R N N R K T 0 1 5 1 1 0 3 0 0 1 1 1 0 0 0 2 1 0 0 0 0 0 17 1 2035.8865 A0A0B4J211;A0A024R9G7;Q6PL18 A0A0B4J211 559 575 ATAD2 ATPase family AAA domain-containing protein 2 yes no 3 4.401E-07 65.097 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1911 116 2071 3127 5103;5104 5104 1797 0 NNSPPTVGAFGHTR ______________________________ RNNSPPTVGAFGHTRCSAFPLEQEADLIEA R N N T R C 1 1 2 0 0 0 0 2 1 0 0 0 0 1 2 1 2 0 0 1 0 0 14 0 1453.7062 F5H1D4;Q86XL3 F5H1D4 15 28 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes no 2;3 0.00024077 63.128 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1912 632 2072 3128;3129 5105;5106;5107 5107 959 0 NNTAAETEDDESDGEDRGGGTSGSLR RNKAITSLLGGGSPKNNTAAETEDDESDGE SDGEDRGGGTSGSLRRSKRNSDSTELAAQM K N N L R R 2 2 2 4 0 0 4 5 0 0 1 0 0 0 0 3 3 0 0 0 0 0 26 1 2639.0815 Q6IEH8;Q6KC79 Q6IEH8 2661 2686 NIPBL Nipped-B-like protein yes no 3 1.6314E-16 60.093 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1913 856 2073 3130 5108 5108 1414 0 NPDDITQEEYGEFYK IDQEELNKTKPIWTRNPDDITQEEYGEFYK NPDDITQEEYGEFYKSLTNDWEDHLAVKHF R N P Y K S 0 0 1 2 0 1 3 1 0 1 0 1 0 1 1 0 1 0 2 0 0 0 15 0 1846.7897 A0A024RD80;P08238;B4DMA2;B4DGL0;Q6PK50 A0A024RD80 292 306 HSP90AB1 Heat shock protein HSP 90-beta yes no 2 0.01411 31.639 1 0.72879 0.85661 NaN 1 Median 0.72879 0.85661 NaN 1 0 Median NaN NaN NaN 0 0 Median 2836200 1866800 969490 2836200 1866800 969490 0 0 0 1914 167 2074 3131 5109 5109 1 NPEDKSPQLSLSPRPASPK LKKTPLALAGSPTPKNPEDKSPQLSLSPRP KSPQLSLSPRPASPKAQWPQSEDEGPLNLT K N P P K A 1 1 1 1 0 1 1 0 0 0 2 2 0 0 5 4 0 0 0 0 0 0 19 2 2047.0698 B9EGQ5;M0QXA7;O95785 B9EGQ5 182 200 WIZ Protein Wiz yes no 3 1.0629E-05 41.047 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1915 554 2075 3132 5110 5110 824;825;826 0 NPELPNAAQAQK EILFYRKTIGYKVPRNPELPNAAQAQKEEQ VPRNPELPNAAQAQKEEQLKIDEAESLNDE R N P Q K E 3 0 2 0 0 2 1 0 0 0 1 1 0 0 2 0 0 0 0 0 0 0 12 0 1279.6521 B7ZAX9;B4DZC0;O60264 B7ZAX9 746 757 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes no 2 0.025798 33.922 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2116100 0 2116100 0 0 0 2116100 0 2116100 1916 510 2076 3133 5111 5111 1 NPSPASSSHAVLDEK FKVWTHCQTQHGIVKNPSPASSSHAVLDEK NPSPASSSHAVLDEKFQRKLIDIVREREIK K N P E K F 2 0 1 1 0 0 1 0 1 0 1 1 0 0 2 4 0 0 0 1 0 0 15 0 1537.7372 Q5H9S0;B4DTN6;Q9ULJ3 Q5H9S0 603 617 DKFZp781N1974;ZBTB21 Zinc finger and BTB domain-containing protein 21 yes no 2;3 1.2131E-05 67.685 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1917 499 2077 3134;3135;3136;3137 5112;5113;5114;5115 5114 735 0 NQKPSQVNGAPGSPTEPAGQK RSPSTPAKSPKLQKKNQKPSQVNGAPGSPT VNGAPGSPTEPAGQKQHQKALPKKGVLGKS K N Q Q K Q 2 0 2 0 0 3 1 3 0 0 0 2 0 0 4 2 1 0 0 1 0 0 21 1 2091.0345 Q9BQG0;I3L1L3;B4DE42;B4DZZ1 Q9BQG0 1255 1275 MYBBP1A Myb-binding protein 1A yes no 2 0.0018286 44.807 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1918 914 2078 3138 5116 5116 1577 0 NQLVTPEPTSR SIVPIAPELQPSTSRNQLVTPEPTSRATRC STSRNQLVTPEPTSRATRCRTNRSSVKTPE R N Q S R A 0 1 1 0 0 1 1 0 0 0 1 0 0 0 2 1 2 0 0 1 0 0 11 0 1240.6412 B4DYH4;Q14676 B4DYH4 1151 1161 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 2 0.00018113 69.602 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1919 508 2079 3139 5117 5117 1889 0 NQSFASTHLNQNSSR QDAEEAWKLLKVGRKNQSFASTHLNQNSSR NQSFASTHLNQNSSRSHSIFSIRILHLQGE K N Q S R S 1 1 3 0 0 2 0 0 1 0 1 0 0 1 0 4 1 0 0 0 0 0 15 0 1689.7819 O95235 O95235 365 379 KIF20A Kinesin-like protein KIF20A yes yes 3 0.00079945 44.567 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 7206700 0 7206700 0 0 0 7206700 0 7206700 1920 716 2080 3140 5118 5118 1 NQSFCPTVNLDK GYFGKVGMKHYHLKRNQSFCPTVNLDKLWT LKRNQSFCPTVNLDKLWTLVSEQTRVNAAK R N Q D K L 0 0 2 1 1 1 0 0 0 0 1 1 0 1 1 1 1 0 0 1 0 0 12 0 1421.6609 Q9BQQ5;E9PLL6;Q6NZ52;P46776;E9PJD9 Q9BQQ5 66 77 L27a;RPL27A 60S ribosomal protein L27a yes no 2 0.028297 33.088 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3222200 3222200 0 0 0 0 3222200 3222200 0 1921 626 2081 3141 5119 5119 1 NQSPVLEPVGR LVKGAMAATYSALNRNQSPVLEPVGRSTLA ALNRNQSPVLEPVGRSTLAQRRGIKKITST R N Q G R S 0 1 1 0 0 1 1 1 0 0 1 0 0 0 2 1 0 0 0 2 0 0 11 0 1194.6357 B4DKZ2;B4DG22;B7ZB17;P51812 B4DKZ2 683 693 RPS6KA3 Ribosomal protein S6 kinase alpha-3 yes no 2 0.003331 58.04 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1922 465 2082 3142 5120 5120 673 0 NQTAEKEEFEHQQK KILDKCNEIINWLDKNQTAEKEEFEHQQKE KNQTAEKEEFEHQQKELEKVCNPIITKLYQ K N Q Q K E 1 0 1 0 0 3 4 0 1 0 0 2 0 1 0 0 1 0 0 0 0 0 14 1 1744.8016 E9PKE3;V9HW22;Q53GZ6;P11142;B3KTV0;E9PNE6;Q96IS6;A8K7Q2;B4E1Q1;Q9NZ87;Q9NWW3;E9PM13;Q96H53;E9PS65;Q96BE0 E9PKE3 565 578 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein yes no 3 0.017278 24.935 1 0.58297 0.72405 NaN 1 Median 0.58297 0.72405 NaN 1 0 Median NaN NaN NaN 0 0 Median 13018000 8650600 4367800 13018000 8650600 4367800 0 0 0 1923 623 2083 3143 5121;5122 5122 2 NREEFEDQSLEK KDKNETENDSKDAEKNREEFEDQSLEKDSD AEKNREEFEDQSLEKDSDDKTPDDDPEQGK K N R E K D 0 1 1 1 0 1 4 0 0 0 1 1 0 1 0 1 0 0 0 0 0 0 12 1 1522.69 F5GXF5;E7ETD6;Q12830;F5H176;A0A0A0MR81;B4DDK2;B4DM40 F5GXF5 593 604 BPTF Nucleosome-remodeling factor subunit BPTF yes no 2 0.0025095 66.059 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1924 607 2084 3144;3145 5123;5124 5123 909 0 NRGPSPEPLK SENLWKTALLAVKQRNRGPSPEPLKLMLGP AVKQRNRGPSPEPLKLMLGPANVRPLKRKW R N R L K L 0 1 1 0 0 0 1 1 0 0 1 1 0 0 3 1 0 0 0 0 0 0 10 1 1093.588 B4DZL4;A0A024RCG4;Q92674 B4DZL4 280 289 FSHPRH1;CENPI Centromere protein I yes no 2 0.0021234 71.555 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1925 157 2085 3146 5125 5125 216 0 NRPPLPAGTNSK KDVYVQLYLQHLTARNRPPLPAGTNSKGPP TARNRPPLPAGTNSKGPPDFSSDEEREPTP R N R S K G 1 1 2 0 0 0 0 1 0 0 1 1 0 0 3 1 1 0 0 0 0 0 12 1 1250.6731 P42166;A0A024RBH7;Q59G12;G5E972;A0A024RBE7;P42167 P42166 49 60 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 2;3 1.0896E-08 82.914 2 0.39446 0.55775 5.2504 2 Median NaN NaN NaN 0 0 Median 0.39446 0.55775 5.2504 2 0 Median 39589000 27018000 12571000 0 0 0 39589000 27018000 12571000 1926 757;141 2086 3147;3148 5126;5127 5127 1 NRSADFNPDFVFTEK EGPIVLGRRQKALGKNRSADFNPDFVFTEK NRSADFNPDFVFTEKEGTYDGSWALADVMS K N R E K E 1 1 2 2 0 0 1 0 0 0 0 1 0 3 1 1 1 0 0 1 0 0 15 1 1785.8322 B7Z6D5;B3GQE6;Q96GQ7;Q3MI07;A0A087WYH5 B7Z6D5 46 60 DDX27 Probable ATP-dependent RNA helicase DDX27 yes no 2 0.0049163 53.252 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1927 423 2087 3149 5128 5128 628 0 NRSSAVDPEPQVK VQKSRKTPQKSRNRKNRSSAVDPEPQVKLE RKNRSSAVDPEPQVKLEDVLPLAFTRLCEP K N R V K L 1 1 1 1 0 1 1 0 0 0 0 1 0 0 2 2 0 0 0 2 0 0 13 1 1425.7212 Q5SSJ5;X6RGJ2;Q5SWC8 Q5SSJ5 246 258 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 2 3.7083E-30 121.79 3 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1928 842 2088;2089 3150;3151;3152;3153;3154 5129;5130;5131;5132;5133;5134;5135;5136;5137;5138;5139;5140 5136 1391;1392 0 NRTSFTQEQIEALEK DEAQMRLQLKRKLQRNRTSFTQEQIEALEK NRTSFTQEQIEALEKEFERTHYPDVFARER R N R E K E 1 1 1 0 0 2 3 0 0 1 1 1 0 1 0 1 2 0 0 0 0 0 15 1 1792.8955 Q59GD2;D1KF47;Q66SS1;B3KQG1;F1T0F8;D3DQZ8;P26367 Q59GD2 176 190 PAX6 Paired box protein Pax-6 yes no 3 4.222E-06 73.809 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1929 440 2090 3155 5141;5142 5141 644;1876 0 NSADDEELTNDSLTLSQSK SEGGCKKKKSKVLSRNSADDEELTNDSLTL DEELTNDSLTLSQSKSNEDSLILEKSQNWS R N S S K S 1 0 2 3 0 1 2 0 0 0 3 1 0 0 0 4 2 0 0 0 0 0 19 0 2065.9288 A0A0U1RRH6;O94880 A0A0U1RRH6 279 297 PHF14 PHD finger protein 14 yes no 2 6.6231E-32 118.13 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1930 275 2091;2092 3156;3157;3158 5143;5144;5145;5146 5144 375;376;1825 0 NSAEEEVLSSEK EELNEDIKVKEEQLKNSAEEEVLSSEKQLI QLKNSAEEEVLSSEKQLIKMEKKEEEENGE K N S E K Q 1 0 1 0 0 0 4 0 0 0 1 1 0 0 0 3 0 0 0 1 0 0 12 0 1320.6045 A0A0U1RRH6;O94880 A0A0U1RRH6 83 94 PHF14 PHD finger protein 14 yes no 2 1.125E-164 188.25 1 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1931 275 2093 3159;3160;3161 5147;5148;5149;5150 5149 377;378;379 0 NSAILSDPSVFSPLNK SPRKPRGRPRSGSDRNSAILSDPSVFSPLN SAILSDPSVFSPLNKSETKSGDKIKKKDSK R N S N K S 1 0 2 1 0 0 0 0 0 1 2 1 0 1 2 4 0 0 0 1 0 0 16 0 1687.8781 Q03164;E9PR05;Q9UPD0;Q9Y6P1;Q86YP1;Q86YN9 Q03164 186 201 KMT2A;MLL Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes no 2 3.6592E-13 100.41 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1932 798 2094;2095 3162;3163;3164 5151;5152;5153;5154;5155 5151 1289;1290 0 NSDDAPWSPK DDDDPALKSRPKKKKNSDDAPWSPKARVTP PKKKKNSDDAPWSPKARVTPTLPKQDRPVR K N S P K A 1 0 1 2 0 0 0 0 0 0 0 1 0 0 2 2 0 1 0 0 0 0 10 0 1115.4884 Q9UPP1;H0Y589;H0Y3N9 Q9UPP1 873 882 PHF8 Histone lysine demethylase PHF8 yes no 2 0.020699 54.524 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1933 960 2096 3165 5156 5156 1724 0 NSDLLTSPDVGLLK LADPVGSLKPHLRAKNSDLLTSPDVGLLKL KNSDLLTSPDVGLLKLASPELERLIIQSSN K N S L K L 0 0 1 2 0 0 0 1 0 0 4 1 0 0 1 2 1 0 0 1 0 0 14 0 1470.793 P05412 P05412 57 70 JUN Transcription factor AP-1 yes yes 2 8.2942E-23 116.19 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1934 727 2097 3166;3167 5157;5158;5159;5160 5158 1119;1120;1957 0 NSFREQLEEEEEAK KLSLSTKLKQVEDEKNSFREQLEEEEEAKH KNSFREQLEEEEEAKHNLEKQIATLHAQVA K N S A K H 1 1 1 0 0 1 6 0 0 0 1 1 0 1 0 1 0 0 0 0 0 0 14 1 1736.7853 A0A024R1N1;A0A0U4BW16;P35579;Q86XU5 A0A024R1N1 1339 1352 MYH9 Myosin-9 yes no 3 0.027215 19.527 1 4.34 5.9101 NaN 1 Median NaN NaN NaN 0 0 Median 4.34 5.9101 NaN 1 0 Median 11843000 2655200 9187600 0 0 0 11843000 2655200 9187600 1935 32 2098 3168 5161 5161 0 NSKYEYDPDISPPR PHWKESGASHLSFPKNSKYEYDPDISPPRK KNSKYEYDPDISPPRKKQAKSHFGDKKQLD K N S P R K 0 1 1 2 0 0 1 0 0 1 0 1 0 0 3 2 0 0 2 0 0 0 14 1 1679.7791 A8K4Z6;Q9BRD0;H7C462 A8K4Z6 315 328 BUD13 BUD13 homolog yes no 2 0.0010295 53.169 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1936 357 2099 3169 5162 5162 549 0 NSNLVGAAHEELQQSR TYSAKLDNARQSAERNSNLVGAAHEELQQS SNLVGAAHEELQQSRIRIDSLSAQLSQLQK R N S S R I 2 1 2 0 0 2 2 1 1 0 2 0 0 0 0 2 0 0 0 1 0 0 16 0 1751.8551 P02545;W8QEH3;Q5I6Y5;Q8N519;Q3BDU5;Q5TCI8 P02545 281 296 LMNA Prelamin-A/C;Lamin-A/C yes no 2;3 3.2414E-05 63.128 1 2 1.6709 2.1588 76.395 3 Median 0.47941 0.60703 NaN 1 0 Median 1.7628 2.2728 7.2781 2 0 Median 45056000 16648000 28408000 5268600 2971200 2297500 39788000 13677000 26110000 1937 725 2100 3170;3171;3172 5163;5164;5165;5166 5163 4 NSPLEPDTSTPLK PILKPVSLLRKRDVKNSPLEPDTSTPLKKK VKNSPLEPDTSTPLKKK_____________ K N S L K K 0 0 1 1 0 0 1 0 0 0 2 1 0 0 3 2 2 0 0 0 0 0 13 0 1397.7038 A5PKX7;Q92794;C9K0F9;Q712H4 A5PKX7 1135 1147 MYST3;KAT6A;CBP/MOZ Histone acetyltransferase;Histone acetyltransferase KAT6A yes no 2 1.2344E-06 96.247 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1938 321 2101 3173;3174 5167;5168 5168 490 0 NSPVDQSDFFYEFSK LNKISLKEENVCEEKNSPVDQSDFFYEFSK NSPVDQSDFFYEFSKLIFTKGKSPTVVCSL K N S S K L 0 0 1 2 0 1 1 0 0 0 0 1 0 3 1 3 0 0 1 1 0 0 15 0 1808.7893 X6R3Q3;A0A024R235;Q5VYS8 X6R3Q3 227 241 ZCCHC6 Terminal uridylyltransferase 7 yes no 2 5.7589E-07 79.013 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1939 40 2102 3175 5169;5170 5170 37 0 NSSEKLPTELSK ESISDGPSKVTLEARNSSEKLPTELSKEEP EARNSSEKLPTELSKEEPSTKNTTADKLAI R N S S K E 0 0 1 0 0 0 2 0 0 0 2 2 0 0 1 3 1 0 0 0 0 0 12 1 1331.6933 P38432 P38432 270 281 COIL Coilin yes yes 2 3.1152E-29 127.71 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1940 756 2103 3176 5171;5172 5172 1185 0 NSSISGPFGSR EAFGRRERLVLGSARNSSISGPFGSRSSDT GSARNSSISGPFGSRSSDTPMES_______ R N S S R S 0 1 1 0 0 0 0 2 0 1 0 0 0 1 1 4 0 0 0 0 0 0 11 0 1107.5309 B4DJV5;Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1 B4DJV5 421 431 PWP1 Periodic tryptophan protein 1 homolog yes no 2 0.010834 40.066 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1941 144 2104 3177 5173 5173 206 0 NSSISGPFGSRSSDTPMES EAFGRRERLVLGSARNSSISGPFGSRSSDT SGPFGSRSSDTPMES_______________ R N S E S - 0 1 1 1 0 0 1 2 0 1 0 0 1 1 2 7 1 0 0 0 0 0 19 1 1941.8374 B4DJV5;Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DNL1 B4DJV5 421 439 PWP1 Periodic tryptophan protein 1 homolog yes no 2 9.6E-11 75.548 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1942 144 2105 3178 5174 5174 32 206;207 0 NSSNTSVGSPSNTIGR TFQDGATKLLHNHLKNSSNTSVGSPSNTIG SSNTSVGSPSNTIGRTPSRHTSSRTSPLTS K N S G R T 0 1 3 0 0 0 0 2 0 1 0 0 0 0 1 5 2 0 0 1 0 0 16 0 1576.7441 B7Z4J0;B7Z7C4;Q68D09;B7Z2P0;B7Z5R7;B7Z4E5;B7Z7Q8;H0Y5T1;F8WA11;Q7Z460 B7Z4J0 24 39 DKFZp686D1968;CLASP1 CLIP-associating protein 1 yes no 2 0.00026675 54.004 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1943 537 2106 3179 5175;5176 5176 774 0 NSSPGEASLLEK SSSEEEDVTEETDHRNSSPGEASLLEKETT DHRNSSPGEASLLEKETTRFFFFSKNDERL R N S E K E 1 0 1 0 0 0 2 1 0 0 2 1 0 0 1 3 0 0 0 0 0 0 12 0 1230.6092 A6H8Z4;A0A024R250;Q76FK4 A6H8Z4 1029 1040 NOL8 Nucleolar protein 8 yes no 2 5.9372E-06 96.464 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1944 42 2107 3180;3181 5177;5178;5179;5180 5179 43 0 NSSQQDNSSRESPSLEDEETKKEEETPK TLALLKAQIDPVLLKNSSQQDNSSRESPSL SLEDEETKKEEETPKQEEQKESEKMKSEEQ K N S P K Q 0 1 2 2 0 2 7 0 0 0 1 3 0 0 2 6 2 0 0 0 0 0 28 3 3207.4287 Q96T23;H0YER1;H0YCN2;Q05DG0 Q96T23 216 243 RSF1 Remodeling and spacing factor 1 yes no 4 1.2939E-14 48.831 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1945 910 2108 3182 5181 5181 1568;1569;1570 0 NSSTETDQQPHSPDSSSSVHSIR TLKLKMPKSTPEDHRNSSTETDQQPHSPDS QPHSPDSSSSVHSIRNMQVPQESLEMRTKS R N S I R N 0 1 1 2 0 2 1 0 2 1 0 0 0 0 2 8 2 0 0 1 0 0 23 0 2482.0957 A8K5A5;A0A024R1A2;Q92613 A8K5A5 555 577 PHF16;JADE3 Protein Jade-3 yes no 3 1.34E-10 48.305 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1946 28 2109 3183 5182 5182 25 0 NSSTIIQNPVETPKK STDNQRQQQLNDVVKNSSTIIQNPVETPKK NSSTIIQNPVETPKKDYSLLPLLAAAPQVG K N S K K D 0 0 2 0 0 1 1 0 0 2 0 2 0 0 2 2 2 0 0 1 0 0 15 1 1654.889 P38432 P38432 445 459 COIL Coilin yes yes 2 5.9409E-09 73.887 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1947 756 2110 3184;3185 5183;5184 5183 1968 0 NSSTPGLQVPVSPTVPIQNQK GSVEQGHGNNQDLTRNSSTPGLQVPVSPTV LQVPVSPTVPIQNQKYVPNSTDSPGPSQIS R N S Q K Y 0 0 2 0 0 3 0 1 0 1 1 1 0 0 4 3 2 0 0 3 0 0 21 0 2190.1644 Q03164;B4E012 Q03164 3025 3045 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes no 2 1.8199E-05 41.092 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1948 798 2111 3186 5185 5185 1993 0 NSTADISIGEEEREDFDTSIESK KMKEKQEKLKEDEQRNSTADISIGEEERED GEEEREDFDTSIESKDTEQKELDQDMVTED R N S S K D 1 1 1 3 0 0 5 1 0 3 0 1 0 1 0 4 2 0 0 0 0 0 23 1 2571.146 D3DS96;Q9NRL2;Q59G54;A0A087WWN7 D3DS96 695 717 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes no 3 2.2399E-15 73.072 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1949 591 2112 3187 5186 5186 880;1909 0 NSTECTLILTEGDSAK KGIPKLDDANDAGGRNSTECTLILTEGDSA STECTLILTEGDSAKTLAVSGLGVVGRDKY R N S A K T 1 0 1 1 1 0 2 1 0 1 2 1 0 0 0 2 3 0 0 0 0 0 16 0 1737.8091 P11388 P11388 451 466 TOP2A DNA topoisomerase 2-alpha yes yes 2 8.5254E-150 174.94 1 1 0.76788 0.93443 20.174 2 Median 0.91603 1.0777 NaN 1 0 Median 0.64369 0.8102 NaN 1 0 Median 304840000 164230000 140610000 240930000 124560000 116370000 63915000 39677000 24238000 1950 734 2113 3188;3189 5187;5188;5189;5190;5191;5192;5193;5194;5195 5189 9 NSYNNSQAPSPGLGSK ENALKYSKTLTEHLKNSYNNSQAPSPGLGS SYNNSQAPSPGLGSKAVGMPSPVSPKLSPG K N S S K A 1 0 3 0 0 1 0 2 0 0 1 1 0 0 2 4 0 0 1 0 0 0 16 0 1619.754 Q9UHB7 Q9UHB7 1034 1049 AFF4 AF4/FMR2 family member 4 yes yes 2 1.6156E-13 103.87 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1951 950 2114 3190 5196;5197 5197 1697 0 NTAQHLTVSGFSL PQPDDETDTSYFEARNTAQHLTVSGFSL__ ARNTAQHLTVSGFSL_______________ R N T S L - 1 0 1 0 0 1 0 1 1 0 2 0 0 1 0 2 2 0 0 1 0 0 13 0 1373.6939 A0A087WUU7;Q96GX5 A0A087WUU7 467 479 MASTL Serine/threonine-protein kinase greatwall yes no 2 0.00387 40.552 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1952 183 2115 3191 5198 5198 252;253 0 NTDVAQSPEAPKQEAPAK ANQGKKTESASVQGRNTDVAQSPEAPKQEA VAQSPEAPKQEAPAKKKSGSKKKGEPGPPD R N T A K K 4 0 1 1 0 2 2 0 0 0 0 2 0 0 3 1 1 0 0 1 0 0 18 1 1879.9276 A1A5C4;A0A087WVV2;A0A0A0MRV0;A7BI36;Q9P2E9;V9GY78 A1A5C4 133 150 RRBP1 Ribosome-binding protein 1 yes no 3 1.1257E-11 87.772 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1953 189 2116 3192;3193 5199;5200;5201;5202 5200 268 0 NTETQPTSPQLGTK LFCKSKSVSPPKSAKNTETQPTSPQLGTKT KNTETQPTSPQLGTKTFLSVVLPRLETLLQ K N T T K T 0 0 1 0 0 2 1 1 0 0 1 1 0 0 2 1 4 0 0 0 0 0 14 0 1500.742 Q86X06;A0A024R4V5;Q9Y4Q3;B7Z926;B4DZC2 Q86X06 899 912 BRD1;DKFZp434B094 yes no 2 2.3438E-23 119.96 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1954 64 2117 3194;3195 5203;5204;5205;5206;5207 5207 72 0 NTGVILANDANAER CAPGGKTSYMAQLMKNTGVILANDANAERL KNTGVILANDANAERLKSVVGNLHRLGVTN K N T E R L 3 1 3 1 0 0 1 1 0 1 1 0 0 0 0 0 1 0 0 1 0 0 14 0 1456.727 P46087 P46087 408 421 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 2 0.011362 37.681 1 0.43047 0.56517 NaN 1 Median NaN NaN NaN 0 0 Median 0.43047 0.56517 NaN 1 0 Median 5537000 3220000 2317100 0 0 0 5537000 3220000 2317100 1955 763 2118 3196 5208 5208 1 NTLQLHR HHTIGGSRRAAWRRRNTLQLHRYR______ RRAAWRRRNTLQLHRYR_____________ R N T H R Y 0 1 1 0 0 1 0 0 1 0 2 0 0 0 0 0 1 0 0 0 0 0 7 0 880.4879 A0A024R2Q4;P61313;B4DLP4 A0A024R2Q4 196 202 RPL15 Ribosomal protein L15;60S ribosomal protein L15 yes no 2 0.025411 73.975 1 1 0.64827 0.88021 20.032 2 Median 0.79096 1.0141 NaN 1 0 Median 0.53133 0.76396 NaN 1 0 Median 194430000 123060000 71367000 8840600 4845600 3994900 185590000 118210000 67372000 1956 50 2119 3197;3198 5209;5210 5210 2 NTNAAEESLPEIQK AELKSLEDKAAEVVKNTNAAEESLPEIQKE KNTNAAEESLPEIQKEHRNLLQELKVIQEN K N T Q K E 2 0 2 0 0 1 3 0 0 1 1 1 0 0 1 1 1 0 0 0 0 0 14 0 1542.7526 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 975 988 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 2 7.4585E-193 192.32 1 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 4927500 4927500 0 0 0 0 4927500 4927500 0 1957 941 2120;2121 3199;3200;3201 5211;5212;5213;5214 5211 1669 1 NTQIELQSSPDVQNSLLEDK WEKETKGSRGTDQKKNTQIELQSSPDVQNS LQSSPDVQNSLLEDKTYLDSEERTSIDIVC K N T D K T 0 0 2 2 0 3 2 0 0 1 3 1 0 0 1 3 1 0 0 1 0 0 20 0 2257.1074 Q9UK61;A0A024R363;A0A087X0F1 Q9UK61 1544 1563 FAM208A;C3orf63 Protein FAM208A yes no 2 3.4026E-73 137.8 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1958 954 2122 3202 5215;5216 5216 1711;1712 0 NTSTVVSPSLLEK ______________________________ NKNTSTVVSPSLLEKDPAFQMITIAKETGL K N T E K D 0 0 1 0 0 0 1 0 0 0 2 1 0 0 1 3 2 0 0 2 0 0 13 0 1373.7402 B5MCT9;Q08AL9;E7EPP7;Q6ZWJ1 B5MCT9 4 16 STXBP4 Syntaxin-binding protein 4 yes no 2 0.0018355 57.328 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1959 531 2123 3203 5217;5218 5218 770 0 NVDLASPEEHQK HMNGHVTEESDSEVKNVDLASPEEHQKHRE EVKNVDLASPEEHQKHREMAVDCPGDLGTR K N V Q K H 1 0 1 1 0 1 2 0 1 0 1 1 0 0 1 1 0 0 0 1 0 0 12 0 1365.6525 G3V2B0;Q4VBP4;Q8N3R9 G3V2B0 20 31 MPP5 MAGUK p55 subfamily member 5 yes no 2 0.011778 49.149 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1960 642 2124 3204 5219;5220 5219 974 0 NVHSEDFENR PCSSKFFSAYKSHFRNVHSEDFENRILLNC KSHFRNVHSEDFENRILLNCPYCTFNADKK R N V N R I 0 1 2 1 0 0 2 0 1 0 0 0 0 1 0 1 0 0 0 1 0 0 10 0 1245.5374 Q6DHZ8;B2RBM8;Q9H2P0;E9PQK8 Q6DHZ8 95 104 ADNP Activity-dependent neuroprotector homeobox protein yes no 2;3 0.00025385 76.522 3 3 1.0411 1.3797 NaN 1 Median NaN NaN NaN 0 0 Median 1.0411 1.3797 NaN 1 0 Median 6355800 2805900 3549900 0 0 0 6355800 2805900 3549900 1961 413 2125;2126 3205;3206;3207;3208;3209;3210 5221;5222;5223;5224;5225;5226;5227;5228;5229;5230;5231;5232;5233 5231 608 0 NVMVEPHR RGRGRGGKRGNQSGKNVMVEPHRHEGVFIC RGNQSGKNVMVEPHRHEGVFICRGKEDALV K N V H R H 0 1 1 0 0 0 1 0 1 0 0 0 1 0 1 0 0 0 0 2 0 0 8 0 980.48618 Q96BS4;P22087;M0QXL5;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0;A0A0D9SFM2;M0QXC9 Q96BS4 24 31 FBL rRNA 2-O-methyltransferase fibrillarin yes no 2 0.0082642 67.981 1 0.49565 0.63689 NaN 1 Median NaN NaN NaN 0 0 Median 0.49565 0.63689 NaN 1 0 Median 18801000 12335000 6465500 0 0 0 18801000 12335000 6465500 1962 747 2127 3211 5234 5234 167 1 NVPYVFVR PLEIILHLPLLCEDKNVPYVFVRSKQALGR PLLCEDKNVPYVFVRSKQALGRACGVSRPV K N V V R S 0 1 1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 1 3 0 0 8 0 992.54435 Q6FHM6;B1AHD1;P55769 Q6FHM6 77 84 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed yes no 2 0.022913 50.966 1 0.51167 0.67289 NaN 1 Median NaN NaN NaN 0 0 Median 0.51167 0.67289 NaN 1 0 Median 11895000 7618600 4276600 0 0 0 11895000 7618600 4276600 1963 390 2128 3212 5235 5235 1 NVQDAIADAEQR QRLQGEIAHVKKQCKNVQDAIADAEQRGEH QCKNVQDAIADAEQRGEHALKDARNKLNDL K N V Q R G 3 1 1 2 0 2 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 12 0 1328.6321 CON__P35908;P35908 CON__P35908 425 436 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 5.5631E-05 72.652 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2428700 2428700 0 0 0 0 2428700 2428700 0 + 1964 583 2129 3213 5236 5236 1 NVQDAIADAEQRGEHALK QRLQGEIAHVKKQCKNVQDAIADAEQRGEH DAIADAEQRGEHALKDARNKLNDLEEALQQ K N V L K D 4 1 1 2 0 2 2 1 1 1 1 1 0 0 0 0 0 0 0 1 0 0 18 1 1963.9712 CON__P35908;P35908 CON__P35908 425 442 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 3 4.0577E-05 53.188 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 19161000 19161000 0 1635400 1635400 0 17526000 17526000 0 + 1965 583 2130 3214;3215 5237;5238 5238 2 NVQLQENEIR IIQRLLEVRGSKPGKNVQLQENEIRGLCLK SKPGKNVQLQENEIRGLCLKSREIFLSQPI K N V I R G 0 1 2 0 0 2 2 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 10 0 1241.6364 A0A024RBP2;F8W0W8;P36873;Q9UPN1;F8VYE8;F8VR82;A0A087WYY5 A0A024RBP2 27 36 PPP1CC Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit yes no 2 1.6945E-19 114.89 1 0.79924 0.9973 NaN 1 Median 0.79924 0.9973 NaN 1 0 Median NaN NaN NaN 0 0 Median 2500400 1053500 1446800 2500400 1053500 1446800 0 0 0 1966 148 2131 3216 5239 5239 1 NVSSFPDDATSPLQENR ELRKAKKDDQMLKRRNVSSFPDDATSPLQE SSFPDDATSPLQENRNNQGTVNWSVDDIVK R N V N R N 1 1 2 2 0 1 1 0 0 0 1 0 0 1 2 3 1 0 0 1 0 0 17 0 1875.8599 Q7Z726;A8K7D9;P52292;J3QLL0;J3KS65 Q7Z726 52 68 KPNA2 Importin subunit alpha;Importin subunit alpha-1 yes no 2 1.1734E-60 138.66 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1967 368 2132 3217;3218 5240;5241;5242;5243;5244;5245;5246 5245 567;1860 0 NVVDSSQKPTPSAR KTSEKKDSKESSVVKNVVDSSQKPTPSARE KNVVDSSQKPTPSAREDPAPKKSSSEPPPR K N V A R E 1 1 1 1 0 1 0 0 0 0 0 1 0 0 2 3 1 0 0 2 0 0 14 1 1484.7583 Q03164;E9PR05;B3W6H7;Q8N6B4;Q1HA41 Q03164 1236 1249 KMT2A;TET1-MLL;MLL/CALM fusion;MLL-MAML2 Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes no 2;3 0.0045745 58.885 2 0.85799 1.0954 NaN 1 Median NaN NaN NaN 0 0 Median 0.85799 1.0954 NaN 1 0 Median 5651800 3425600 2226200 0 0 0 5651800 3425600 2226200 1968 798 2133;2134 3219;3220 5247;5248 5248 1291 1 NWPFLEGCACTPER AWQPFLKDHRISTFKNWPFLEGCACTPERM KNWPFLEGCACTPERMAEAGFIHCPTENEP K N W E R M 1 1 1 0 2 0 2 1 0 0 1 0 0 1 2 0 1 1 0 0 0 0 14 0 1735.7447 B7Z7B9;A3E0Z5;E7CU85;A0A0B4J1S3;H3BLT4;O15392;A3E0Z4;A3E0Z6;A3E0Z7;A3E0Z8 B7Z7B9 24 37 BIRC5 Baculoviral IAP repeat-containing protein 5 yes no 2 0.00058862 85.493 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1969 234 2135 3221;3222 5249;5250 5249 1819 0 NWTEDMEGGISSPVK GDYYTSPSSPTSSSRNWTEDMEGGISSPVK NWTEDMEGGISSPVKKTEMDKSPFNSPSPQ R N W V K K 0 0 1 1 0 0 2 2 0 1 0 1 1 0 1 2 1 1 0 1 0 0 15 0 1648.7403 Q6FI30;P08651 Q6FI30 303 317 NFIC Nuclear factor 1;Nuclear factor 1 C-type yes no 2 5.6397E-26 118.2 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1970 730 2136 3223;3224 5251;5252 5252 152 1124;1125 0 NYDAALRK THLVFRPLMEKVEVKNYDAALRKITFPHRC MEKVEVKNYDAALRKITFPHRCLISCSKKR K N Y R K I 2 1 1 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 8 1 949.49813 H3BSH7;Q969X6;A0A0J9YXV4;A0A0J9YWK2;A0A0J9YWM9 H3BSH7 336 343 CIRH1A Cirhin yes no 2 0.017228 49.442 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 4806600 4806600 0 0 0 0 4806600 4806600 0 1971 667 2137 3225 5253 5253 1 NYEDEDSLK EINNIIKIVGLQYKKNYEDEDSLKTLRYGK GLQYKKNYEDEDSLKTLRYGKIMIMTDQDQ K N Y L K T 0 0 1 2 0 0 2 0 0 0 1 1 0 0 0 1 0 0 1 0 0 0 9 0 1111.4669 P11388 P11388 521 529 TOP2A DNA topoisomerase 2-alpha yes yes 2 0.013584 47.603 1 0.78895 1.0265 NaN 1 Median NaN NaN NaN 0 0 Median 0.78895 1.0265 NaN 1 0 Median 16182000 8935000 7247000 0 0 0 16182000 8935000 7247000 1972 734 2138 3226 5254;5255 5255 2 NYGFVHIEDK LFEQYGKVLECDIIKNYGFVHIEDKTAAED CDIIKNYGFVHIEDKTAAEDAIRNLHHYKL K N Y D K T 0 0 1 1 0 0 1 1 1 1 0 1 0 1 0 0 0 0 1 1 0 0 10 0 1220.5826 D6R9K7;J3QRR5;E9PB51;Q9BWF3;E9PLB0;E9PM61;U3KQD5;A8K9U0;Q9BQ04 D6R9K7 36 45 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B yes no 2 0.0095276 59.426 1 2.8148 3.6367 NaN 1 Median NaN NaN NaN 0 0 Median 2.8148 3.6367 NaN 1 0 Median 7009800 1839000 5170700 0 0 0 7009800 1839000 5170700 1973 595 2139 3227 5256 5256 1 PAASSPETPSAGQQEAK PHNDTEIANSTPNPKPAASSPETPSAGQQE ASSPETPSAGQQEAKTDQADGPREPPQSAR K P A A K T 4 0 0 0 0 2 2 1 0 0 0 1 0 0 3 3 1 0 0 0 0 0 17 0 1654.7798 Q9NQS7;B3KPD3 Q9NQS7 417 433 INCENP Inner centromere protein yes no 2 4.0797E-175 183.23 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1974 932 2140 3228;3229 5257;5258;5259;5260 5259 1639 0 PAEKPAETPVATSPTATDSTSGDSSR ASSEPAPASAAKQEKPAEKPAETPVATSPT TSPTATDSTSGDSSRSNLFEDATSALVTGQ K P A S R S 4 1 0 2 0 0 2 1 0 0 0 1 0 0 4 5 5 0 0 1 0 0 26 1 2559.1936 H0Y579;B7ZA74;B7Z4W4;B4DEA3;Q53F10;P54727 H0Y579 18 43 RAD23B UV excision repair protein RAD23 homolog B yes no 3 8.6867E-23 81.297 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1975 460 2141 3230;3231 5261;5262;5263 5261 670;1880 0 PAETPVATSPTATDSTSGDSSR PAPASAAKQEKPAEKPAETPVATSPTATDS TSPTATDSTSGDSSRSNLFEDATSALVTGQ K P A S R S 3 1 0 2 0 0 1 1 0 0 0 0 0 0 3 5 5 0 0 1 0 0 22 0 2133.9662 H0Y579;B7ZA74;B7Z4W4;B4DEA3;Q53F10;P54727 H0Y579 22 43 RAD23B UV excision repair protein RAD23 homolog B yes no 2 3.1627E-74 142.26 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1976 460 2142 3232 5264;5265 5264 670;1880 0 PANIFLGPR LAHLHSQGLVHLDVKPANIFLGPRGRCKLG VHLDVKPANIFLGPRGRCKLGDFGLLVELG K P A P R G 1 1 1 0 0 0 0 1 0 1 1 0 0 1 2 0 0 0 0 0 0 0 9 0 983.55525 I3L136;A6NHV6;Q0IJ49;B4DZM6;Q99640 I3L136 227 235 PKMYT1 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase yes no 2 0.0088318 57.559 1 0.61422 0.86149 NaN 1 Median NaN NaN NaN 0 0 Median 0.61422 0.86149 NaN 1 0 Median 88491000 54319000 34172000 0 0 0 88491000 54319000 34172000 1977 328 2143 3233 5266 5266 1 PAPLLESPFK GALSKYAKKIFLAQKPAPLLESPFKDRDHF FLAQKPAPLLESPFKDRDHFQLGTLSHTLN K P A F K D 1 0 0 0 0 0 1 0 0 0 2 1 0 1 3 1 0 0 0 0 0 0 10 0 1097.6121 B4E0B2;Q3MNE1;A0A0S2Z4Z4;A8K586;A0A0S2Z5J4;O00203 B4E0B2 507 516 AP3B1 AP-3 complex subunit beta;AP-3 complex subunit beta-1 yes no 2 0.013383 55.401 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1978 268 2144 3234 5267 5267 368 0 PAPPKPEPK TKQEPTRRSARLSAKPAPPKPEPKPRKTSA ARLSAKPAPPKPEPKPRKTSAKKEPGAKIS K P A P K P 1 0 0 0 0 0 1 0 0 0 0 2 0 0 5 0 0 0 0 0 0 0 9 1 959.54402 A0A087WZE9;Q15651;P05204 P05204 34 42 HMGN3;HMGN2 High mobility group nucleosome-binding domain-containing protein 3;Non-histone chromosomal protein HMG-17 no no 3 0.0027321 58.596 1 0.4755 0.56898 NaN 1 Median NaN NaN NaN 0 0 Median 0.4755 0.56898 NaN 1 0 Median 79413000 53178000 26234000 0 0 0 79413000 53178000 26234000 1979 200;726 2145 3235 5268;5269;5270 5269 3 PAPPKPEPKPK VKDEPQRRSARLSAKPAPPKPEPKPKKAPA LSAKPAPPKPEPKPKKAPAKKGEKVPKGKK K P A P K K 1 0 0 0 0 0 1 0 0 0 0 3 0 0 6 0 0 0 0 0 0 0 11 2 1184.6917 P05204 P05204 32 42 HMGN2 Non-histone chromosomal protein HMG-17 yes yes 3 0.00016793 71.524 1 0.43844 0.63313 NaN 1 Median NaN NaN NaN 0 0 Median 0.43844 0.63313 NaN 1 0 Median 92871000 64169000 28703000 0 0 0 92871000 64169000 28703000 1980 726 2146 3236 5271;5272 5271 2 PAPPKPEPKPR TKQEPTRRSARLSAKPAPPKPEPKPRKTSA LSAKPAPPKPEPKPRKTSAKKEPGAKISRG K P A P R K 1 1 0 0 0 0 1 0 0 0 0 2 0 0 6 0 0 0 0 0 0 0 11 2 1212.6979 A0A087WZE9;Q15651 A0A087WZE9 34 44 HMGN3 High mobility group nucleosome-binding domain-containing protein 3 yes no 3;4 0.0067469 29.534 2 0.40411 0.56929 33.085 2 Median NaN NaN NaN 0 0 Median 0.40411 0.56929 33.085 2 0 Median 14150000 9595800 4554700 0 0 0 14150000 9595800 4554700 1981 200 2147 3237;3238 5273;5274 5273 1 PAPPKPEPR VKDEPQRRSARLSAKPAPPKPEPRPKKASA ARLSAKPAPPKPEPRPKKASAKKGEKLPKG K P A P R P 1 1 0 0 0 0 1 0 0 0 0 1 0 0 5 0 0 0 0 0 0 0 9 1 987.55016 A0A024R046;O00479 A0A024R046 32 40 HMGN4 High mobility group nucleosome-binding domain-containing protein 4 yes no 3 0.00034194 86.136 1 0.54263 0.8484 NaN 1 Median NaN NaN NaN 0 0 Median 0.54263 0.8484 NaN 1 0 Median 74467000 48574000 25893000 0 0 0 74467000 48574000 25893000 1982 12 2148 3239 5275;5276 5275 2 PASVPPSPSLSR EPNEADAAQGYRYPRPASVPPSPSLSRHSS YPRPASVPPSPSLSRHSSPHQSEDEEDPRN R P A S R H 1 1 0 0 0 0 0 0 0 0 1 0 0 0 4 4 0 0 0 1 0 0 12 0 1193.6404 B7Z806;B7Z6I6;Q53ER0;A8K6K7;P13807;B7Z255 B7Z806 559 570 GYS1 Glycogen [starch] synthase, muscle yes no 2 0.0055988 56.951 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1983 364 2149 3240;3241 5277;5278 5278 561;562 0 PFSAPKPQTSPSPK PALKAQSGPVRSGPKPFSAPKPQTSPSPKR KPFSAPKPQTSPSPKRATKKEPAVLELEGK K P F P K R 1 0 0 0 0 1 0 0 0 0 0 2 0 1 5 3 1 0 0 0 0 0 14 1 1467.7722 B4DNY3;B4DUZ8;B4DNW7;B4DNA3;B4DI38;D3DPU2;B2RDY9;Q01518 B4DNY3 225 238 CAP1 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 1 yes no 2;3 1.6952E-23 118.13 1 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1984 418 2150 3242;3243;3244 5279;5280;5281;5282;5283 5280 613;614;1874 0 PGEYSYFSPR GDGDIRTMCPLLSMKPGEYSYFSPRTMSMW LLSMKPGEYSYFSPRTMSMWAGPDHWRFRP K P G P R T 0 1 0 0 0 0 1 1 0 0 0 0 0 1 2 2 0 0 2 0 0 0 10 0 1201.5404 B4DRG7;E9PHA2;A8K4T8;Q15003;C9J470 B4DRG7 401 410 NCAPH Condensin complex subunit 2 yes no 2 1.719E-159 186.76 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1985 354 2151 3245;3246 5284;5285;5286;5287;5288;5289;5290 5285 540 0 PGGPPNPPGPSPK IDTLREILKRRTQSRPGGPPNPPGPSPKAL SRPGGPPNPPGPSPKALAKMMGGAGPGSSL R P G P K A 0 0 1 0 0 0 0 3 0 0 0 1 0 0 7 1 0 0 0 0 0 0 13 0 1197.6142 B9EGQ5;M0QXA7;O95785;B3KR89 B9EGQ5 277 289 WIZ Protein Wiz yes no 2 0.00025084 66.784 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1986 554 2152 3247 5291 5291 827 0 PGPRPPAGELGSIGDHER AYGGKAAPAAPPAARPGPRPPAGELGSIGD RPPAGELGSIGDHERAIDFSPYLEPLGAPQ R P G E R A 1 2 0 1 0 0 2 4 1 1 1 0 0 0 4 1 0 0 0 0 0 0 18 1 1840.918 P17676;W8SNV5;W8SNU6 P17676 54 71 CEBPB CCAAT/enhancer-binding protein beta yes no 4 0.0072074 11.071 1 1.4954 2.3588 NaN 1 Median NaN NaN NaN 0 0 Median 1.4954 2.3588 NaN 1 0 Median 12932000 5017200 7915100 0 0 0 12932000 5017200 7915100 1987 741 2153 3248 5292 5292 1 PGQPLFLDSISPKK RGLRRDSITPDIATKPGQPLFLDSISPKKS KPGQPLFLDSISPKKSFKTRKQKSSSKAEY K P G K K S 0 0 0 1 0 1 0 1 0 1 2 2 0 1 3 2 0 0 0 0 0 0 14 1 1525.8504 B7Z4V7;Q2TB10;Q49A13 B7Z4V7 229 242 ZNF800 Zinc finger protein 800 yes no 2 2.3432E-05 78.932 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1988 539 2154 3249 5293 5293 777;778 0 PLDLRPK QKENLRKFYKGKKYKPLDLRPKKTRAMRRR FYKGKKYKPLDLRPKKTRAMRRRLNKHEEN K P L P K K 0 1 0 1 0 0 0 0 0 0 2 1 0 0 2 0 0 0 0 0 0 0 7 1 837.50724 P42766 P42766 80 86 RPL35 60S ribosomal protein L35 yes yes 2 0.0031396 92.467 1 0.25196 0.36071 NaN 1 Median NaN NaN NaN 0 0 Median 0.25196 0.36071 NaN 1 0 Median 16991000 12427000 4564400 0 0 0 16991000 12427000 4564400 1989 760 2155 3250 5294 5294 1 PLEGRPER VPRPPDADPNTPSPKPLEGRPERQFFVKWQ PNTPSPKPLEGRPERQFFVKWQGMSYWHCS K P L E R Q 0 2 0 0 0 0 2 1 0 0 1 0 0 0 2 0 0 0 0 0 0 0 8 1 952.50903 B3KY63;F5GWX5;A0A0C4DGG9;Q14839 B3KY63 508 515 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 3 0.0076099 51.346 1 0.79671 1.2477 NaN 1 Median NaN NaN NaN 0 0 Median 0.79671 1.2477 NaN 1 0 Median 12315000 6392600 5922800 0 0 0 12315000 6392600 5922800 1990 244 2156 3251 5295 5295 1 PLFSSASPQDSSPR DQDMSSPTTMKKPEKPLFSSASPQDSSPRL KPLFSSASPQDSSPRLSTFPQHHHPGIPGV K P L P R L 1 1 0 1 0 1 0 0 0 0 1 0 0 1 3 5 0 0 0 0 0 0 14 0 1474.7052 Q5VW31;A0A1B0GWB8;A0A1B0GW37;U3KQE8;Q5VW28;A0A1B0GVN4;B4DS74;A0A1B0GWJ4;A0A0A0MRX8;A0A1B0GU97;A0A1B0GWI9;Q5VW27;Q5VW30;Q5VW26;O00712 Q5VW31 70 83 NFIB Nuclear factor 1;Nuclear factor 1 B-type yes no 2 8.604E-123 168.91 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1991 216 2157;2158 3252;3253;3254;3255 5296;5297;5298;5299;5300;5301;5302 5301 298;299;300 0 PLIQEESDTIVSSSK ASADDIGTLICKNKKPLIQEESDTIVSSSK PLIQEESDTIVSSSKSALHSSVPKSTNDRD K P L S K S 0 0 0 1 0 1 2 0 0 2 1 1 0 0 1 4 1 0 0 1 0 0 15 0 1631.8254 F5GXF5;E7ETD6;Q12830 F5GXF5 1299 1313 BPTF Nucleosome-remodeling factor subunit BPTF yes no 2 0.001147 57.019 1 1.0295 1.3052 NaN 1 Median NaN NaN NaN 0 0 Median 1.0295 1.3052 NaN 1 0 Median 7921500 3945300 3976200 0 0 0 7921500 3945300 3976200 1992 607 2159 3256 5303;5304;5305 5303 3 PLSECKSPSEPLIPK IEIVESDVKSQTILKPLSECKSPSEPLIPK PLSECKSPSEPLIPKRVGLIHISQVISEVD K P L P K R 0 0 0 0 1 0 2 0 0 1 2 2 0 0 4 3 0 0 0 0 0 0 15 1 1680.8757 B2R935;A0A024R1S2;Q99741 B2R935 413 427 CDC6 Cell division control protein 6 homolog yes no 2 1.5991E-05 77.42 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1993 36 2160 3257 5306 5306 34 0 PLTYPQYSPPQPR WMVQPHFLGPSSYPRPLTYPQYSPPQPRPG PRPLTYPQYSPPQPRPGVIRALGPPPGVRR R P L P R P 0 1 0 0 0 2 0 0 0 0 1 0 0 0 5 1 1 0 2 0 0 0 13 0 1542.7831 B4DDQ7;E9PKL5;E9PPX2;Q53GM9;B2R9B4;A0A0S2Z595;P15407 B4DDQ7 67 79 FOSL1 Fos-related antigen 1 yes no 2 0.0028522 58.676 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1994 269 2161 3258 5307 5307 369 0 PQLHQKSIMK SSILPGNRPNSTNIRPQLHQKSIMKKKAGH STNIRPQLHQKSIMKKKAGHKANSKHKDKE R P Q M K K 0 0 0 0 0 2 0 0 1 1 1 2 1 0 1 1 0 0 0 0 0 0 10 1 1208.67 Q8IXW5 Q8IXW5 240 249 RPAP2 Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 yes yes 2 0.014459 45.081 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1995 875 2162 3259 5308 5308 203 1467 0 PRHQEGEIFDTEK KHLTDAYFKKKKLRKPRHQEGEIFDTEKEK RKPRHQEGEIFDTEKEKYEITEQRKIDQKA K P R E K E 0 1 0 1 0 1 3 1 1 1 0 1 0 1 1 0 1 0 0 0 0 0 13 1 1584.7532 Q8TBK5;Q8N5Z7;A0A024RBK3;Q02878;B4DRX3;B2R4K7;Q9HBB3 Q8TBK5 225 237 RPL6 60S ribosomal protein L6 yes no 3 0.00167 58.32 1 0.72772 0.93539 NaN 1 Median 0.72772 0.93539 NaN 1 0 Median NaN NaN NaN 0 0 Median 8583600 5215800 3367800 8583600 5215800 3367800 0 0 0 1996 146 2163 3260 5309;5310 5310 2 PSLLTSEK ______________________________ FQIKTVRPSLLTSEKSTACLPSQMAPAGHL R P S E K S 0 0 0 0 0 0 1 0 0 0 2 1 0 0 1 2 1 0 0 0 0 0 8 0 873.48075 A3KMG8 A3KMG8 9 16 ZMIZ2 yes yes 2 0.016263 47.743 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1997 307 2164 3261 5311 5311 456;1834 0 PSQVNGAPGSPTEPAGQK STPAKSPKLQKKNQKPSQVNGAPGSPTEPA VNGAPGSPTEPAGQKQHQKALPKKGVLGKS K P S Q K Q 2 0 1 0 0 2 1 3 0 0 0 1 0 0 4 2 1 0 0 1 0 0 18 0 1720.838 Q9BQG0;I3L1L3;B4DE42;B4DZZ1 Q9BQG0 1258 1275 MYBBP1A Myb-binding protein 1A yes no 2 1.2642E-07 62.924 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1998 914 2165 3262 5312;5313 5313 1577 0 PSSSPVIFAGGQDR LESPPKGVTIPYRPKPSSSPVIFAGGQDRY KPSSSPVIFAGGQDRYSTGSDSASFPHTTP K P S D R Y 1 1 0 1 0 1 0 2 0 1 0 0 0 1 2 3 0 0 0 1 0 0 14 0 1416.6997 H3BSS4;B4DLC0;Q15366 H3BSS4 17 30 PCBP2 Poly(rC)-binding protein 2 yes no 2 1.0125E-87 138.42 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 1999 478 2166 3263 5314;5315 5315 692 0 PVHHGVNQLK GGRKRPVPKGATYGKPVHHGVNQLKFARSL ATYGKPVHHGVNQLKFARSLQSVAEERAGR K P V L K F 0 0 1 0 0 1 0 1 2 0 1 1 0 0 1 0 0 0 0 2 0 0 10 0 1127.62 A0A024R2Q4;P61313;B4DLP4;E7EQV9;E7ENU7;E7EX53;B4DEN1;A4D1Q5 A0A024R2Q4 84 93 RPL15;LOC136321 Ribosomal protein L15;60S ribosomal protein L15 yes no 3 7.0659E-05 90.919 1 0.59251 0.74707 NaN 1 Median NaN NaN NaN 0 0 Median 0.59251 0.74707 NaN 1 0 Median 93012000 55260000 37752000 0 0 0 93012000 55260000 37752000 2000 50 2167 3264 5316;5317 5316 2 PVLGSYRGQIVQSK MTTEKQKQDANMPKKPVLGSYRGQIVQSKI KPVLGSYRGQIVQSKINSFRKPLQVKDESS K P V S K I 0 1 0 0 0 2 0 2 0 1 1 1 0 0 1 2 0 0 1 2 0 0 14 1 1530.8518 B2RMQ4;Q8WWK9 B2RMQ4 173 186 CKAP2 Cytoskeleton-associated protein 2 yes no 3 0.022425 15.387 1 3.218 4.2323 NaN 1 Median NaN NaN NaN 0 0 Median 3.218 4.2323 NaN 1 0 Median 8044500 1841800 6202700 0 0 0 8044500 1841800 6202700 2001 419 2168 3265 5318 5318 1 PVSSAASVYAGAGGSGSR YRSLGSVQAPSYGARPVSSAASVYAGAGGS SAASVYAGAGGSGSRISVSRSTSFRGGMGS R P V S R I 4 1 0 0 0 0 0 4 0 0 0 0 0 0 1 5 0 0 1 2 0 0 18 0 1579.759 F8VZY9;B2RA03;A0A024RAY2;P05783 F8VZY9 28 45 KRT18 Keratin, type I cytoskeletal 18 yes no 2 4.1107E-136 171.98 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2002 134 2169 3266;3267 5319;5320;5321;5322;5323 5321 194 0 PYGFSGSTSRPAIGSPKK P Y K K 1 1 0 0 0 0 0 3 0 1 0 2 0 1 3 4 1 0 1 0 0 0 18 2 1835.953 REV__A8MYI2 yes no 3 0.0041491 24.793 1 0.79091 1.132 NaN 1 Median NaN NaN NaN 0 0 Median 0.79091 1.132 NaN 1 0 Median 61853000 33313000 28540000 0 0 0 61853000 33313000 28540000 + 2003 974 2170 3268 5324 5324 1 QAHDLSPAAESSSTFSFSGR NIENQRRGQELSATRQAHDLSPAAESSSTF SPAAESSSTFSFSGRDSSFTEVPRSPKHAH R Q A G R D 3 1 0 1 0 1 1 1 1 0 1 0 0 2 1 6 1 0 0 0 0 0 20 0 2080.945 O95425 O95425 216 235 SVIL Supervillin yes yes 3 1.4162E-09 49.266 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2004 719 2171 3269 5325;5326 5326 1100 0 QALEEAATADLDITEINK REMNWLDYFALGGNKQALEEAATADLDITE EEAATADLDITEINKLTAEAIQTPLKSAKT K Q A N K L 4 0 1 2 0 1 3 0 0 2 2 1 0 0 0 0 2 0 0 0 0 0 18 0 1943.9688 Q53HL2;A8K7A2;B4DXT3 Q53HL2 81 98 CDCA8 Borealin yes no 2 0.00012179 43.761 1 0.89483 1.0729 NaN 1 Median 0.89483 1.0729 NaN 1 0 Median NaN NaN NaN 0 0 Median 9714200 5685200 4029000 9714200 5685200 4029000 0 0 0 2005 837 2172 3270 5327 5327 1 QDQSNVQIAAAPTPEK ITKSHTVAIDNQIFKQDQSNVQIAAAPTPE DQSNVQIAAAPTPEKEMMLQNLMTTSEDGK K Q D E K E 3 0 1 1 0 3 1 0 0 1 0 1 0 0 2 1 1 0 0 1 0 0 16 0 1695.8428 E9PPJ1;Q8NG31 E9PPJ1 501 516 CASC5 Protein CASC5 yes no 2 0.0029094 53.252 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2006 627 2173 3271 5328;5329;5330 5329 1929 0 QDSLVINLNR KTREAEEKEKEGIVKQDSLVINLNRSNPKL EGIVKQDSLVINLNRSNPKLKDLYIRPNIA K Q D N R S 0 1 2 1 0 1 0 0 0 1 2 0 0 0 0 1 0 0 0 1 0 0 10 0 1170.6357 Q9Y5B9 Q9Y5B9 648 657 SUPT16H FACT complex subunit SPT16 yes yes 2 1.6488E-08 100.82 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2007 967 2174 3272 5331;5332;5333 5333 1752 0 QEAKPQQAAGMLSPK SVSSTLAAKDDPDGKQEAKPQQAAGMLSPK QEAKPQQAAGMLSPKTGGKEAASGTTPQKS K Q E P K T 3 0 0 0 0 3 1 1 0 0 1 2 1 0 2 1 0 0 0 0 0 0 15 1 1582.8137 E7ETY2;J3KQ96;Q13428;B4DRA2 E7ETY2 1245 1259 TCOF1 Treacle protein yes no 3 0.00034285 48.824 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2008 608 2175 3273 5334 5334 125 919 0 QEPLEEDSPSSSSAGLDK PMRSGGGSVGAVVVKQEPLEEDSPSSSSAG LEEDSPSSSSAGLDKA______________ K Q E D K A 1 0 0 2 0 1 3 1 0 0 2 1 0 0 2 5 0 0 0 0 0 0 18 0 1874.8381 C9JCN8;P15408 C9JCN8 184 201 FOSL2 Fos-related antigen 2 yes no 2 1.6316E-80 146.81 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2009 560 2176 3274 5335;5336 5336 840 0 QESCSPHHPQVLAQQGSGSSPK GMQPPVSSPPLGALKQESCSPHHPQVLAQQ HPQVLAQQGSGSSPKATDIPASASPPPVAG K Q E P K A 1 0 0 0 1 4 1 2 2 0 1 1 0 0 3 5 0 0 0 1 0 0 22 0 2345.0819 Q8N1G0;F8WCX2 Q8N1G0 223 244 ZNF687 Zinc finger protein 687 yes no 3 1.4887E-07 44.953 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2010 879 2177 3275 5337 5337 1478;1479;1480 0 QEYDESGPSIVHR ILASLSTFQQMWISKQEYDESGPSIVHRKC SKQEYDESGPSIVHRKCF____________ K Q E H R K 0 1 0 1 0 1 2 1 1 1 0 0 0 0 1 2 0 0 1 1 0 0 13 0 1515.6954 P63261;B4E3A4;Q8WVW5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4DVQ0;B4E335;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;V9HVZ7;Q96DE1;Q96FU6;Q6S8J3;A5A3E0;L0R5C4;P0CG39;P0CG38;Q9BYX7 P63261 360 372 ACTG1;PS1TP5BP1;ACTB;HEL-176;POTEE;POTEF;POTEM;POTEJ;POTEI;POTEKP Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member J;POTE ankyrin domain family member I;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed yes no 3 0.0014148 52.576 1 1 1.3979 1.8003 103.18 2 Median 0.70177 0.8679 NaN 1 0 Median 2.7846 3.7343 NaN 1 0 Median 85244000 39749000 45495000 53270000 30510000 22760000 31974000 9238900 22735000 2011 794 2178 3276;3277 5338;5339;5340;5341;5342 5339 5 QEYDESGPSIVHRK ILASLSTFQQMWISKQEYDESGPSIVHRKC KQEYDESGPSIVHRKCF_____________ K Q E R K C 0 1 0 1 0 1 2 1 1 1 0 1 0 0 1 2 0 0 1 1 0 0 14 1 1643.7903 P63261;B4E3A4;Q8WVW5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4DVQ0;B4E335;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;V9HVZ7;Q96DE1;Q96FU6;Q6S8J3;A5A3E0;L0R5C4;P0CG39;P0CG38;Q9BYX7 P63261 360 373 ACTG1;PS1TP5BP1;ACTB;HEL-176;POTEE;POTEF;POTEM;POTEJ;POTEI;POTEKP Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member J;POTE ankyrin domain family member I;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed yes no 3 0.00022929 58.752 1 0.73619 0.95882 NaN 1 Median 0.73619 0.95882 NaN 1 0 Median NaN NaN NaN 0 0 Median 37024000 22786000 14238000 37024000 22786000 14238000 0 0 0 2012 794 2179 3278 5343;5344;5345;5346 5345 4 QGTQYTFSSIEREEYGK GTTTTRSFDFEIETKQGTQYTFSSIEREEY TQYTFSSIEREEYGKLFDFVNAKKLNIKNR K Q G G K L 0 1 0 0 0 2 3 2 0 1 0 1 0 1 0 2 2 0 2 0 0 0 17 1 2021.933 A0A024R4Z6;Q08945 A0A024R4Z6 397 413 SSRP1 FACT complex subunit SSRP1 yes no 3 3.7907E-08 79.022 1 1 0.73219 1.0219 2.7975 2 Median 0.8002 1.0423 NaN 1 0 Median 0.66995 1.0018 NaN 1 0 Median 61057000 34427000 26629000 36474000 19097000 17377000 24582000 15330000 9252000 2013 65 2180 3279;3280 5347;5348;5349;5350 5347 4 QGVLTHGR VRISGGNDKQGFPMKQGVLTHGRVRLLLSK KQGFPMKQGVLTHGRVRLLLSKGHSCYRPR K Q G G R V 0 1 0 0 0 1 0 2 1 0 1 0 0 0 0 0 1 0 0 1 0 0 8 0 866.47225 Q96DV6;A2A3R6;P62753;A2A3R5 Q96DV6 65 72 RPS6 40S ribosomal protein S6 yes no 2 0.018189 56.659 1 0.38742 0.50532 NaN 1 Median NaN NaN NaN 0 0 Median 0.38742 0.50532 NaN 1 0 Median 23791000 17292000 6498400 0 0 0 23791000 17292000 6498400 2014 303 2181 3281 5351 5351 1 QGVSYSVHAYTGQPSPR QTWPTDHRAQQGVQRQGVSYSVHAYTGQPS VSYSVHAYTGQPSPRGLHSENREDEGWQVY R Q G P R G 1 1 0 0 0 2 0 2 1 0 0 0 0 0 2 3 1 0 2 2 0 0 17 0 1832.8806 Q8IVT2 Q8IVT2 64 80 MISP Mitotic interactor and substrate of PLK1 yes yes 2;3 8.5582E-08 68.458 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2015 873 2182 3282;3283 5352;5353 5352 1463 0 QILIACSPVSSVR VSEHHDTILRVTRRRQILIACSPVSSVRKK RRQILIACSPVSSVRKKPKVTPTKESYTEE R Q I V R K 1 1 0 0 1 1 0 0 0 2 1 0 0 0 1 3 0 0 0 2 0 0 13 0 1428.7759 J3KP30;B7Z854;Q5QJE6;E9PRB3 J3KP30 111 123 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 yes no 2 2.9914E-31 123.76 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2016 545 2183 3284;3285 5354;5355 5354 793;794;795 0 QILIACSPVSSVRK VSEHHDTILRVTRRRQILIACSPVSSVRKK RQILIACSPVSSVRKKPKVTPTKESYTEEI R Q I R K K 1 1 0 0 1 1 0 0 0 2 1 1 0 0 1 3 0 0 0 2 0 0 14 1 1556.8708 J3KP30;B7Z854;Q5QJE6;E9PRB3 J3KP30 111 124 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 yes no 2 0.00047535 40.552 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2017 545 2184 3286 5356 5356 793;794;795 0 QISGQYSGSPQLLK FAQKISRTVAAEVRKQISGQYSGSPQLLKN KQISGQYSGSPQLLKNLNIVGNISHHTTVP K Q I L K N 0 0 0 0 0 3 0 2 0 1 2 1 0 0 1 3 0 0 1 0 0 0 14 0 1504.7886 Q96N67;A0A1B0GUE9 Q96N67 22 35 DOCK7 Dedicator of cytokinesis protein 7 yes no 2 0.0028282 61.815 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2018 909 2185 3287 5357 5357 1561 0 QISNLQQSISDAEQR RVIQRLRSEIDNVKKQISNLQQSISDAEQR QISNLQQSISDAEQRGENALKDAKNKLNDL K Q I Q R G 1 1 1 1 0 4 1 0 0 2 1 0 0 0 0 3 0 0 0 0 0 0 15 0 1715.8438 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;H6VRG2;H6VRF9;CON__P04264 H6VRG3 418 432 KRT1 Keratin, type II cytoskeletal 1 yes no 2 6.1356E-06 60.49 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1724300 1724300 0 1724300 1724300 0 0 0 0 + 2019 670 2186 3288 5358 5358 1 QIVGTPVNSEDSDTR QTEKKDSKIVPGNEKQIVGTPVNSEDSDTR QIVGTPVNSEDSDTRQTSHLQARSLSEINK K Q I T R Q 0 1 1 2 0 1 1 1 0 1 0 0 0 0 1 2 2 0 0 2 0 0 15 0 1616.7642 J3KP30;B7Z854;Q5QJE6 J3KP30 228 242 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 yes no 2 6.5337E-12 101.39 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2020 545 2187 3289;3290 5359;5360;5361;5362 5360 1899 0 QKEEEEATASERNDADEK QSESKPPKKKKKKRRQKEEEEATASERNDA EEEATASERNDADEKHPEHAEQNIRKSKKK R Q K E K H 3 1 1 2 0 1 6 0 0 0 0 2 0 0 0 1 1 0 0 0 0 0 18 2 2077.9036 A8KAG1;Q5T3I0;A0A0A0MRK1;E9PAV9;F8W895 A8KAG1 211 228 GPATCH4 G patch domain-containing protein 4 yes no 4 0.0053439 20.939 1 0.95743 1.1538 NaN 1 Median 0.95743 1.1538 NaN 1 0 Median NaN NaN NaN 0 0 Median 2764300 1743700 1020600 2764300 1743700 1020600 0 0 0 2021 383 2188 3291 5363 5363 1 QLSESFK KSTPSRGSSSKSSSRQLSESFKSKEFVSSD SSSKSSSRQLSESFKSKEFVSSDESSSGEN R Q L F K S 0 0 0 0 0 1 1 0 0 0 1 1 0 1 0 2 0 0 0 0 0 0 7 0 837.42323 A0A024R4Z6;Q08945 A0A024R4Z6 655 661 SSRP1 FACT complex subunit SSRP1 yes no 2 0.018392 49.715 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2022 65 2189 3292 5364 5364 75 0 QLSSGVSEIR SPAVAAPAYSRALSRQLSSGVSEIRHTADR RALSRQLSSGVSEIRHTADRWRVSLDVNHF R Q L I R H 0 1 0 0 0 1 1 1 0 1 1 0 0 0 0 3 0 0 0 1 0 0 10 0 1074.5669 B4DL87;V9HW43;P04792;F8WE04 B4DL87 45 54 HEL-S-102;HSPB1 Heat shock protein beta-1 yes no 2 0.00026166 77.062 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2023 477 2190 3293 5365;5366;5367 5367 691 0 QLTQTTHTDKVPGDEDK PLGKRDIVEELSALKQLTQTTHTDKVPGDE TQTTHTDKVPGDEDKGINVFRETAKQKLDP K Q L D K G 0 0 0 3 0 2 1 1 1 0 1 2 0 0 1 0 4 0 0 1 0 0 17 1 1911.9174 P46013 P46013 2139 2155 MKI67 Antigen KI-67 yes yes 4 0.003773 23.329 1 0.82761 1.0175 NaN 1 Median 0.82761 1.0175 NaN 1 0 Median NaN NaN NaN 0 0 Median 19998000 12065000 7932800 19998000 12065000 7932800 0 0 0 2024 762 2191 3294 5368;5369 5369 2 QLVIYEEISDPEEDDE KRGEHAWTHRLRERKQLVIYEEISDPEEDD LVIYEEISDPEEDDE_______________ K Q L D E - 0 0 0 3 0 1 5 0 0 2 1 0 0 0 1 1 0 0 1 1 0 0 16 0 1921.8317 Q9Y444;A0A024R019;R9QTR3;A4PIW0;A4PIV8;A4PIV9;A4PIV7;Q99909;Q7RTT5;Q7RTT3;Q16385;Q16384 Q9Y444 83 98 SSX7;SYT-SSX2;SYT-SSX1;SSX3;SSX9;SSX2;SSX1 Protein SSX3;Protein SSX7;Protein SSX9;Protein SSX2;Protein SSX1 yes no 2 1.2622E-05 56.043 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2025 11 2192 3295 5370 5370 16 0 QPEKEEEEEAGESVEDIFSEVVGR GPVGPAPSRPALQEKQPEKEEEEEAGESVE AGESVEDIFSEVVGRKRQRSGPNRGAKRRR K Q P G R K 1 1 0 1 0 1 9 2 0 1 0 1 0 1 1 2 0 0 0 3 0 0 24 1 2720.2301 Q8TDD1 Q8TDD1 632 655 DDX54 ATP-dependent RNA helicase DDX54 yes yes 3 0.01175 17.502 1 0.54738 0.81429 NaN 1 Median NaN NaN NaN 0 0 Median 0.54738 0.81429 NaN 1 0 Median 23349000 15549000 7799100 0 0 0 23349000 15549000 7799100 2026 889 2193 3296 5371 5371 1 QQDLHLESPQRQPEYSPESPR SPQGQPEPGAASPQRQQDLHLESPQRQPEY ESPQRQPEYSPESPRCQPKPSEEAPKCSQD R Q Q P R C 0 2 0 1 0 4 3 0 1 0 2 0 0 0 4 3 0 0 1 0 0 0 21 1 2520.1993 Q9H6F5 Q9H6F5 95 115 CCDC86 Coiled-coil domain-containing protein 86 yes yes 3 3.2341E-07 43.206 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2027 927 2194 3297 5372 5372 1623;1624;1625 0 QQFILTSPDGAGTGK KIQIVTAVDASGSPKQQFILTSPDGAGTGK QQFILTSPDGAGTGKVILASPETSSAKQLI K Q Q G K V 1 0 0 1 0 2 0 3 0 1 1 1 0 1 1 1 2 0 0 0 0 0 15 0 1518.7678 C9JKS0;F2YGU2;P49116;C9JMI6 C9JKS0 68 82 NR2C2 Nuclear receptor subfamily 2 group C member 2 yes no 2 4.901E-21 81.904 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2028 562 2195 3298 5373 5373 846 0 QQQEEEDLNLEDRGEETVLGGGTR ESRAYADPCSRRKKRQQQEEEDLNLEDRGE LEDRGEETVLGGGTREAESRACSDGRSRKS R Q Q T R E 0 2 1 2 0 3 6 4 0 0 3 0 0 0 0 0 2 0 0 1 0 0 24 1 2701.2427 A8KAG1;Q5T3I0 A8KAG1 340 363 GPATCH4 G patch domain-containing protein 4 yes no 3 1.1196E-05 38.67 1 0.78483 0.99273 NaN 1 Median 0.78483 0.99273 NaN 1 0 Median NaN NaN NaN 0 0 Median 4707500 2287600 2420000 4707500 2287600 2420000 0 0 0 2029 383 2196 3299 5374;5375 5374 2 QQVAFYGQTLGQAQAHSQEQ SSPPDYTMAWAEYYRQQVAFYGQTLGQAQA YGQTLGQAQAHSQEQ_______________ R Q Q E Q - 3 0 0 0 0 7 1 2 1 0 1 0 0 1 0 1 1 0 1 1 0 0 20 0 2218.0403 A0A024R8A7;Q96I24 A0A024R8A7 553 572 hCG_31253;FUBP3 Far upstream element-binding protein 3 yes no 2 2.2251E-11 63.46 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2030 101 2197 3300 5376 5376 141 0 QRPSYDIFEDSDDSEPGGPPAPR QDSLLQRKSARRCVKQRPSYDIFEDSDDSE EDSDDSEPGGPPAPRRRTPRENELPLPEPE K Q R P R R 1 2 0 4 0 1 2 2 0 1 0 0 0 1 5 3 0 0 1 0 0 0 23 1 2531.1201 Q9UMN6 Q9UMN6 1082 1104 KMT2B Histone-lysine N-methyltransferase 2B yes yes 3 2.0381E-10 47.808 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2031 958 2198 3301 5377 5377 1720;1721 0 QSFDDNDSEELEDK FTSKDKKKKGQKGKKQSFDDNDSEELEDKD KQSFDDNDSEELEDKDSKSKKTAKPKVEMY K Q S D K D 0 0 1 4 0 1 3 0 0 0 1 1 0 1 0 2 0 0 0 0 0 0 14 0 1669.6591 A0JLR8;Q05CQ1;Q8N5A0;A0A087WUT6;O60841 A0JLR8 106 119 EIF5B Eukaryotic translation initiation factor 5B yes no 2 0.00021221 63.894 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2032 182 2199 3302 5378 5378 251 0 QSGEAFVELGSEDDVK DGAAGVHFIYTREGRQSGEAFVELGSEDDV SGEAFVELGSEDDVKMALKKDRESMGHRYI R Q S V K M 1 0 0 2 0 1 3 2 0 0 1 1 0 1 0 2 0 0 0 2 0 0 16 0 1708.7792 A0A024R7T3;P52597;A0A1B0GW42 A0A024R7T3 53 68 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes no 2 0.019813 28.806 1 0.55279 0.66927 NaN 1 Median 0.55279 0.66927 NaN 1 0 Median NaN NaN NaN 0 0 Median 3400500 1853300 1547200 3400500 1853300 1547200 0 0 0 2033 95 2200 3303 5379 5379 1 QSLHTYLR IESFSSRVVSLSEYRQSLHTYLRSKMSQVA VSLSEYRQSLHTYLRSKMSQVAPSLSALIG R Q S L R S 0 1 0 0 0 1 0 0 1 0 2 0 0 0 0 1 1 0 1 0 0 0 8 0 1016.5403 A8K9K6;O00567;A0PJ92;H0Y653;H0YDU4 A8K9K6 279 286 NOP56 Nucleolar protein 56 yes no 3 0.0089967 51.854 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 13049000 13049000 0 0 0 0 13049000 13049000 0 2034 379 2201 3304 5380 5380 1 QSPLGFEVHDEITVTR TKASVSITFDNSDKKQSPLGFEVHDEITVT SPLGFEVHDEITVTRQVVIGGRNKYLINGV K Q S T R Q 0 1 0 1 0 1 2 1 1 1 1 0 0 1 1 1 2 0 0 2 0 0 16 0 1826.9163 B7ZLZ7;A0A024R158;O95347;A8K984;B3KMB1;Q2KQ72;Q05BV1;Q6IPS5;A0JLM9;Q32Q15;Q05D74;Q6P712 B7ZLZ7 90 105 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 yes no 3 0.027655 15.392 1 0.61746 0.81349 NaN 1 Median NaN NaN NaN 0 0 Median 0.61746 0.81349 NaN 1 0 Median 5828800 3245800 2583000 0 0 0 5828800 3245800 2583000 2035 27 2202 3305 5381 5381 0 QSVENDIHGLRK ADDFRVKYETELAMRQSVENDIHGLRKVID AMRQSVENDIHGLRKVIDDTNITRLQLETE R Q S R K V 0 1 1 1 0 1 1 1 1 1 1 1 0 0 0 1 0 0 0 1 0 0 12 1 1394.7266 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965 F8VZY9 176 187 KRT18 Keratin, type I cytoskeletal 18 yes no 3 0.027225 23.749 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2429100 2429100 0 2429100 2429100 0 0 0 0 2036 134 2203 3306 5382 5382 1 QTDLELSPLTK ATVKKTMNMIQKLQKQTDLELSPLTKEEKT KLQKQTDLELSPLTKEEKTAAEQFKFHMPD K Q T T K E 0 0 0 1 0 1 1 0 0 0 3 1 0 0 1 1 2 0 0 0 0 0 11 0 1243.666 J3KTC5;Q8WVK7 J3KTC5 66 76 SKA2 Spindle and kinetochore-associated protein 2 yes no 2 1.9209E-08 100.22 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2037 680 2204 3307 5383;5384;5385 5385 1015 0 QVHPDTGISSK SRKESYSVYVYKVLKQVHPDTGISSKAMGI KVLKQVHPDTGISSKAMGIMNSFVNDIFER K Q V S K A 0 0 0 1 0 1 0 1 1 1 0 1 0 0 1 2 1 0 0 1 0 0 11 0 1167.5884 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;P57053;Q96A08;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257 A0A024RCJ2 48 58 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS;HIST1H2BA;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B no no 2;3 4.7034E-39 146.11 7 4 0.68277 0.85226 12.553 7 Median 0.77419 0.88822 2.7779 3 0 Plateau 0.56884 0.71575 9.9471 4 0 Median 1153100000 718470000 434610000 291970000 172850000 119120000 861110000 545620000 315490000 2038 10;158 2205 3308;3309;3310;3311;3312;3313;3314;3315;3316;3317;3318 5386;5387;5388;5389;5390;5391;5392;5393;5394;5395;5396;5397;5398;5399;5400;5401;5402;5403;5404;5405;5406;5407;5408;5409 5392 24 QVSSPSFTNR REFALNNENYSLSNRQVSSPSFTNRRAAKA SLSNRQVSSPSFTNRRAAKASHMGVSTDSG R Q V N R R 0 1 1 0 0 1 0 0 0 0 0 0 0 1 1 3 1 0 0 1 0 0 10 0 1121.5465 A0A024RAC0;Q86V48 A0A024RAC0 420 429 LUZP1 Leucine zipper protein 1 yes no 2 0.00027137 72.652 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2039 127 2206 3319 5410;5411 5411 182 0 RAADEVLAEAK SAPLEIGLQRSTQVKRAADEVLAEAKKPRI TQVKRAADEVLAEAKKPRIEDEECVRLDKE K R A A K K 4 1 0 1 0 0 2 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 11 1 1171.6197 Q6P1J9;B4DV47;A0A1B0GUB2 Q6P1J9 126 136 CDC73 Parafibromin yes no 2 0.015729 39.625 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 5626900 0 5626900 0 0 0 5626900 0 5626900 2040 859 2207 3320 5412 5412 1 RACASPSAQVEGSPVAGSDGSQPAVK LKRPDDVPLSLSPSKRACASPSAQVEGSPV GSPVAGSDGSQPAVKLEPLHFLQCHSKNNS K R A V K L 5 1 0 1 1 2 1 3 0 0 0 1 0 0 3 5 0 0 0 3 0 0 26 1 2512.1976 F8WDB4;A0A140VJD0;Q9UFC0 F8WDB4 95 120 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 yes no 3 2.374E-24 84.226 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2041 278 2208;2209 3321;3322 5413;5414 5413 392;393 0 RAEEIWQQSVIGDYLAR GGEREERGKLPESPKRAEEIWQQSVIGDYL EEIWQQSVIGDYLARFKNDRVKALKAMEMT K R A A R F 2 2 0 1 0 2 2 1 0 2 1 0 0 0 0 1 0 1 1 1 0 0 17 1 2033.033 B4DNQ1;E9PKP7;A8K962;P17480;O00164;B4DLB0;E9PLT2 B4DNQ1 384 400 UBTF Nucleolar transcription factor 1 yes no 3 6.3626E-06 38.915 1 0.77177 1.3051 NaN 1 Median NaN NaN NaN 0 0 Median 0.77177 1.3051 NaN 1 0 Median 26247000 14877000 11370000 0 0 0 26247000 14877000 11370000 2042 376 2210 3323 5415;5416;5417 5416 3 RAFLIEEQK YGGSMCAKCVRDRIKRAFLIEEQKIVVKVL VRDRIKRAFLIEEQKIVVKVLKAQAQSQKA K R A Q K I 1 1 0 0 0 1 2 0 0 1 1 1 0 1 0 0 0 0 0 0 0 0 9 1 1132.6241 A0A024RDH8;P49207;Q5MK14 A0A024RDH8 93 101 RPL34 60S ribosomal protein L34 yes no 2 4.3629E-06 80.438 1 1 0.73016 0.93872 NaN 1 Median 0.73016 0.93872 NaN 1 0 Median NaN NaN NaN 0 0 Median 30324000 26373000 3951200 8681400 4730300 3951200 21643000 21643000 0 2043 169 2211 3324;3325 5418;5419 5419 2 RAFQLEEGEETEPDCK ISNGDINLSLRKAKKRAFQLEEGEETEPDC AFQLEEGEETEPDCKYSKKHWKSRENNNNN K R A C K Y 1 1 0 1 1 1 5 1 0 0 1 1 0 1 1 0 1 0 0 0 0 0 16 1 1936.8473 P38432 P38432 112 127 COIL Coilin yes yes 3 0.00016024 49.188 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2044 756 2212 3326 5420 5420 1969 0 RAFVPQLR PSVVKVSYKGSPAARRAFVPQLRSGKFNVL KGSPAARRAFVPQLRSGKFNVLLTTYEYII R R A L R S 1 2 0 0 0 1 0 0 0 0 1 0 0 1 1 0 0 0 0 1 0 0 8 1 985.58213 A7E2E1;Q9HBD4;B9EGQ8;A0A0A0MT49;P51532;B4E0F1;B4DSI8;Q59FZ6 A7E2E1 842 849 SMARCA4 Transcription activator BRG1 yes no 2 0.0080955 49.358 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2045 224 2213 3327 5421 5421 1 RAGELTEDEVER YAHVVLRKADIDLTKRAGELTEDEVERVIT LTKRAGELTEDEVERVITIMQNPRQYKIPD K R A E R V 1 2 0 1 0 0 4 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 12 1 1402.6688 P62269 P62269 55 66 RPS18 40S ribosomal protein S18 yes yes 3 7.8266E-05 79.466 1 1 0.95642 1.4153 57.079 2 Median 0.75027 0.94525 NaN 1 0 Median 1.2192 2.1189 NaN 1 0 Median 58655000 27828000 30827000 3878700 2408100 1470600 54776000 25420000 29356000 2046 787 2214 3328;3329 5422;5423;5424;5425;5426 5424 5 RALASNTSFFSGCSPIEEEAH ATEYQENKAPGKKKKRALASNTSFFSGCSP TSFFSGCSPIEEEAH_______________ K R A A H - 3 1 1 0 1 0 3 1 1 1 1 0 0 2 1 4 1 0 0 0 0 0 21 1 2309.0383 Q59HG1;O95239;B3KNC0;B4DYE2;Q2VIQ3 Q59HG1 1215 1235 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B yes no 2;3 5.4358E-39 117.84 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2047 717 2215 3330;3331;3332;3333 5427;5428;5429;5430;5431;5432;5433 5427 1088;1089 0 RALVEFESNPEETREPGSPPSVQR RPESPESLTSVSRTRRALVEFESNPEETRE PEETREPGSPPSVQRAGLGSPERPPKTSPG R R A Q R A 1 3 1 0 0 1 5 1 0 0 1 0 0 1 4 3 1 0 0 2 0 0 24 2 2710.3311 Q9H6F5;H0YG79 Q9H6F5 30 53 CCDC86 Coiled-coil domain-containing protein 86 yes no 3;4 3.0788E-83 139.93 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2048 927 2216 3334;3335 5434;5435;5436;5437;5438 5437 1618;2040 0 RAPFDLFENK VEGQLEFRALLFIPRRAPFDLFENKKKKNN LFIPRRAPFDLFENKKKKNNIKLYVRRVFI R R A N K K 1 1 1 1 0 0 1 0 0 0 1 1 0 2 1 0 0 0 0 0 0 0 10 1 1235.6299 A0A024RD80;P08238;B4DMA2;B4DGL0;Q58FF7 A0A024RD80 338 347 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 2 0.0097445 57.532 1 4.6175 6.7418 NaN 1 Median NaN NaN NaN 0 0 Median 4.6175 6.7418 NaN 1 0 Median 19407000 3356400 16050000 0 0 0 19407000 3356400 16050000 2049 167 2217 3336 5439;5440 5439 2 RAPPPAVAAR APAAPPAVAPPAGPRRAPPPAVAAREPPLP PAGPRRAPPPAVAAREPPLPPPPQPPAPPQ R R A A R E 4 2 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 1 0 0 10 1 1004.5879 Q6SPF0 Q6SPF0 198 207 SAMD1 Atherin yes yes 2 0.0082853 52.937 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 8157700 8157700 0 0 0 0 8157700 8157700 0 2050 863 2218 3337 5441 5441 1 RAPSVANVGSHCDLSLK VTGEGRVKESITRRRRAPSVANVGSHCDLS PSVANVGSHCDLSLKIPEISIQDMTAQVTS R R A L K I 2 1 1 1 1 0 0 1 1 0 2 1 0 0 1 3 0 0 0 2 0 0 17 1 1809.9156 Q5HY54;Q60FE6;Q60FE5;P21333;B4DTD5;Q96C61;Q6NXF2;Q8TES4;Q2VP91;B4E2F9 Q5HY54 2109 2125 FLNA;FLJ00119 Filamin-A yes no 3 2.2481E-07 64.87 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2051 746 2219 3338 5442;5443 5442 1165 0 RAQGQADESSENEEEEIELIPEK TEPGYEVLTDSEIIRRAQGQADESSENEEE SSENEEEEIELIPEKHINHAAALQWTENLL R R A E K H 2 1 1 1 0 2 8 1 0 2 1 1 0 0 1 2 0 0 0 0 0 0 23 1 2629.1991 Q9Y4A0 Q9Y4A0 452 474 JRKL Jerky protein homolog-like yes yes 3 1.2048E-10 51.234 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2052 966 2220 3339 5444 5444 1750;1751 0 RASPPDPSPSPSAASASER TPVPPAMSPWPEDPRRASPPDPSPSPSAAS PDPSPSPSAASASERVVPSPLQFCAATPKH R R A E R V 4 2 0 1 0 0 1 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 19 1 1865.8868 Q9Y2F5 Q9Y2F5 1690 1708 ICE1 Little elongation complex subunit 1 yes yes 3 0.00086421 45.608 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2053 962 2221 3340 5445 5445 1731 0 RASQEANLLTLAQK QVLRGGVIQSTRRRRRASQEANLLTLAQKA RRASQEANLLTLAQKAVELASLQNAKDGSG R R A Q K A 3 1 1 0 0 2 1 0 0 0 3 1 0 0 0 1 1 0 0 0 0 0 14 1 1541.8526 H7C1L3;A0A0A0MSU2;A0PJD3;A0A024R689;A0A1C7CYX1;Q6PJG2 H7C1L3 281 294 ELMSAN1;C14orf43 ELM2 and SANT domain-containing protein 1 yes no 2;3 2.1703E-10 99.711 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2054 81 2222 3341;3342;3343 5446;5447;5448 5448 110 0 RAYDIAGSTK KMQSLDKDIVALMVRRAYDIAGSTKDVKVF ALMVRRAYDIAGSTKDVKVFLNGNKLPVKG R R A T K D 2 1 0 1 0 0 0 1 0 1 0 1 0 0 0 1 1 0 1 0 0 0 10 1 1080.5564 P11388 P11388 242 251 TOP2A DNA topoisomerase 2-alpha yes yes 2 1.4026E-08 108.47 1 2 0.77461 1.2011 10.69 3 Median 0.77155 1.0011 NaN 1 0 Median 0.77854 1.2047 0.42497 2 0 Median 109520000 59779000 49741000 14161000 6998600 7162200 95359000 52781000 42578000 2055 734 2223 3344;3345;3346 5449;5450;5451;5452;5453;5454;5455;5456 5455 8 RAYVEIEYEQETEPVAK KHKGKMPLRGPLQRKRAYVEIEYEQETEPV YVEIEYEQETEPVAKAKTT___________ K R A A K A 2 1 0 0 0 1 5 0 0 1 0 1 0 0 1 0 1 0 2 2 0 0 17 1 2053.0004 Q9BXY0 Q9BXY0 280 296 MAK16 Protein MAK16 homolog yes yes 3 1.2858E-08 79.013 1 1 0.7038 0.98822 4.3839 2 Median 0.78321 1.0193 NaN 1 0 Median 0.63244 0.95806 NaN 1 0 Median 44285000 24046000 20239000 16348000 8059500 8288200 27937000 15987000 11951000 2056 921 2224 3347;3348 5457;5458;5459 5458 2 RCGVQSFYTPR TYTFNTHKAQHTFCKRCGVQSFYTPRSNPG TFCKRCGVQSFYTPRSNPGGFGIAPHCLDE K R C P R S 0 2 0 0 1 1 0 1 0 0 0 0 0 1 1 1 1 0 1 1 0 0 11 1 1369.6561 Q7Z7K6 Q7Z7K6 218 228 CENPV Centromere protein V yes yes 3 0.019065 21.395 1 0.88402 1.1949 NaN 1 Median NaN NaN NaN 0 0 Median 0.88402 1.1949 NaN 1 0 Median 5285100 1846300 3438800 0 0 0 5285100 1846300 3438800 2057 871 2225 3349 5460 5460 1 RDDDEPGPWTK EKGKSGFLVWRYLLRRDDDEPGPWTKEGKD YLLRRDDDEPGPWTKEGKDRIKKLGLTMQY R R D T K E 0 1 0 3 0 0 1 1 0 0 0 1 0 0 2 0 1 1 0 0 0 0 11 1 1314.584 A0A087WVR3;A0A087WTW0;Q96T88;B4E0F9;A0A087WWG9 A0A087WVR3 595 605 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes no 2 0.010926 49.466 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 4810700 4810700 0 0 0 0 4810700 4810700 0 2058 181 2226 3350 5461 5461 1 RDELTLEGIK MTNKFMTDPIRILVKRDELTLEGIKQFFVA RILVKRDELTLEGIKQFFVAVEREEWKFDT K R D I K Q 0 1 0 1 0 0 2 1 0 1 2 1 0 0 0 0 1 0 0 0 0 0 10 1 1172.6401 A0A024R8W0;P38919 A0A024R8W0 243 252 DDX48;EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes no 2 0.021333 43.282 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2313400 0 2313400 0 0 0 2313400 0 2313400 2059 108 2227 3351 5462 5462 1 RDFNQFIK EKEKLLTQGFTNWNKRDFNQFIKANEKWGR GFTNWNKRDFNQFIKANEKWGRDDIENIAR K R D I K A 0 1 1 1 0 1 0 0 0 1 0 1 0 2 0 0 0 0 0 0 0 0 8 1 1066.556 B7ZAX9;B4DZC0;O60264;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370 B7ZAX9 791 798 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 yes no 2 0.021589 53.968 1 2.366 3.627 NaN 1 Median NaN NaN NaN 0 0 Median 2.366 3.627 NaN 1 0 Median 31699000 9410800 22288000 0 0 0 31699000 9410800 22288000 2060 510 2228 3352 5463 5463 1 RDGEAQEAASETQPLSSPPTAASSK MASLGPEGKLRPEPRRDGEAQEAASETQPL ETQPLSSPPTAASSKAPSSGSAQPPEGHPG R R D S K A 5 1 0 1 0 2 3 1 0 0 1 1 0 0 3 5 2 0 0 0 0 0 25 1 2514.1834 Q9NPU0;B5MEB3;Q8WTX5;A0A087WWW8;A0A024R1E5;Q9Y6J0 Q9NPU0 447 471 DKFZp762G2015;CABIN1 Calcineurin-binding protein cabin-1 yes no 3 1.1818E-08 41.087 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2061 30 2229 3353 5464 5464 26;27 0 RDHRPPCAQEAPR DDIFRIYIKEKKECRRDHRPPCAQEAPRNM CRRDHRPPCAQEAPRNMVHPNVICDGCNGP R R D P R N 2 3 0 1 1 1 1 0 1 0 0 0 0 0 3 0 0 0 0 0 0 0 13 2 1588.7641 E7EMC7;Q13501;E3W990;B4DE82;E3WH17;C9JRJ8;E9PFW8 E7EMC7 107 119 SQSTM1;SQSTM1-ALK Sequestosome-1;Tyrosine-protein kinase receptor yes no 4 0.004043 20.585 1 0.51292 0.66725 NaN 1 Median 0.51292 0.66725 NaN 1 0 Median NaN NaN NaN 0 0 Median 9401600 5772700 3628900 9401600 5772700 3628900 0 0 0 2062 605 2230 3354 5465;5466 5465 2 RDIVLDVSSTSSEDSDEENEELNK HLTFECRNFLRVDPKRDIVLDVSSTSSEDS TSSEDSDEENEELNKLQALQEKRINEEEEK K R D N K L 0 1 2 4 0 0 5 0 0 1 2 1 0 0 0 5 1 0 0 2 0 0 24 1 2709.2101 Q8N9Q2 Q8N9Q2 38 61 SREK1IP1 Protein SREK1IP1 yes yes 3 1.4477E-05 35.016 1 0.24277 0.31188 NaN 1 Median 0.24277 0.31188 NaN 1 0 Median NaN NaN NaN 0 0 Median 8425900 5873000 2552900 8425900 5873000 2552900 0 0 0 2063 882 2231 3355 5467 5467 1 RDNYVPEVSALDQEIIEVDPDTK VRGISIKLQEEERERRDNYVPEVSALDQEI SALDQEIIEVDPDTKEMLKLLVSVCWIPKV R R D T K E 1 1 1 4 0 1 3 0 0 2 1 1 0 0 2 1 1 0 1 3 0 0 23 1 2644.2868 H0YN88;A0A075B716;P08708 H0YN88 81 103 RPS17 40S ribosomal protein S17 yes no 3 1.466E-05 35.94 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3993300 2656000 1337300 3993300 2656000 1337300 0 0 0 2064 175 2232 3356 5468 5468 1 RDPALNSGVSQKPDPAK STTGAKKRAAPKGTKRDPALNSGVSQKPDP PALNSGVSQKPDPAKTKNRRKRKPSTSDDS K R D A K T 2 1 1 2 0 1 0 1 0 0 1 2 0 0 3 2 0 0 0 1 0 0 17 2 1778.9275 P11388 P11388 1443 1459 TOP2A DNA topoisomerase 2-alpha yes yes 3;4 1.4769E-08 72.676 4 2 0.73977 1.0261 11.131 4 Median 0.77522 0.92846 13.283 2 0 Median 0.73977 1.0616 3.9489 2 0 Median 343320000 195190000 148130000 46115000 23726000 22389000 297210000 171470000 125740000 2065 734 2233;2234 3357;3358;3359;3360;3361;3362 5469;5470;5471;5472;5473;5474;5475;5476 5473 1144 4 RDQNYPGAIAIHHPNVAEK AANPAFNLFWAGWDRRDQNYPGAIAIHHPN YPGAIAIHHPNVAEKRISNSTSPTSFVAWG R R D E K R 3 1 2 1 0 1 1 1 2 2 0 1 0 0 2 0 0 0 1 1 0 0 19 1 2129.0766 CON__P15636 CON__P15636 342 360 yes yes 4 0.013875 19.587 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 9745200 9745200 0 0 0 0 9745200 9745200 0 + 2066 581 2235 3363 5477 5477 1 RDSGSFEQYSENIK LSCHSDDLINKKKGKRDSGSFEQYSENIKL KRDSGSFEQYSENIKLLMDWVNAVCAFYNK K R D I K L 0 1 1 1 0 1 2 1 0 1 0 1 0 1 0 3 0 0 1 0 0 0 14 1 1658.7536 B3KWI2;Q8IZT6;B3KM85;Q5VYL4 B3KWI2 1101 1114 ASPM Abnormal spindle-like microcephaly-associated protein yes no 2 0.0016987 41.621 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2067 450 2236 3364 5478 5478 659 0 RDSITPDIATK ANVRRHFDEVHRGLRRDSITPDIATKPGQP RGLRRDSITPDIATKPGQPLFLDSISPKKS R R D T K P 1 1 0 2 0 0 0 0 0 2 0 1 0 0 1 1 2 0 0 0 0 0 11 1 1215.6459 B7Z4V7;Q2TB10;Q49A13;A0A087WXB4 B7Z4V7 218 228 ZNF800 Zinc finger protein 800 yes no 2 0.0014222 65.043 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2068 539 2237 3365;3366 5479;5480 5479 776 0 REEEEQQEGGFASPR LEALANREREKENSKREEEEQQEGGFASPR REEEEQQEGGFASPRTGKGKWKRKSAGGGP K R E P R T 1 2 0 0 0 2 5 2 0 0 0 0 0 1 1 1 0 0 0 0 0 0 15 1 1747.7762 A0A087WVR3;A0A087WTW0;Q96T88;B4E0F9;A0A087WWG9 A0A087WVR3 640 654 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes no 3 0.00018639 45.707 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2958400 2958400 0 0 0 0 2958400 2958400 0 2069 181 2238;2239 3367;3368 5481;5482 5481 248 1 RELEIESQTEEQPTTK ALHTDDPLTWDYVARRELEIESQTEEQPTT ELEIESQTEEQPTTKQAKAVEVGRKEERCC R R E T K Q 0 1 0 0 0 2 5 0 0 1 1 1 0 0 1 1 3 0 0 0 0 0 16 1 1916.9327 B4DSL9;B3KQ21;Q9NYH9;B3KX32 B4DSL9 280 295 UTP6 U3 small nucleolar RNA-associated protein 6 homolog yes no 3 0.0027203 26.548 1 0.83733 1.1385 NaN 1 Median NaN NaN NaN 0 0 Median 0.83733 1.1385 NaN 1 0 Median 11688000 7208000 4480500 0 0 0 11688000 7208000 4480500 2070 438 2240 3369 5483 5483 1 REPLPSR APVSRGRDSYGGPPRREPLPSRRDVYLSPR DSYGGPPRREPLPSRRDVYLSPRDDGYSTK R R E S R R 0 2 0 0 0 0 1 0 0 0 1 0 0 0 2 1 0 0 0 0 0 0 7 1 853.477 B4E352;P38159;H0Y6E7;H3BT71;Q2VIN3;Q96E39;B3KRG5;H3BUY5;F1T0J8;Q8IZ40 B4E352 157 163 RBMX;RBMXL1;RCOR2 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1;REST corepressor 2 yes no 2 0.028927 63.21 1 0.24823 0.42494 NaN 1 Median NaN NaN NaN 0 0 Median 0.24823 0.42494 NaN 1 0 Median 36466000 28651000 7815400 0 0 0 36466000 28651000 7815400 2071 522 2241 3370 5484 5484 1 REPLPSRR APVSRGRDSYGGPPRREPLPSRRDVYLSPR SYGGPPRREPLPSRRDVYLSPRDDGYSTKD R R E R R D 0 3 0 0 0 0 1 0 0 0 1 0 0 0 2 1 0 0 0 0 0 0 8 2 1009.5781 B4E352;P38159;H0Y6E7;H3BT71;Q2VIN3;Q96E39;B3KRG5;H3BUY5 B4E352 157 164 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 yes no 3 0.02473 48.794 1 1 0.79406 1.033 NaN 1 Median 0.79406 1.033 NaN 1 0 Median NaN NaN NaN 0 0 Median 21774000 17817000 3957200 10423000 6465500 3957200 11351000 11351000 0 2072 522 2242 3371;3372 5485;5486 5486 2 REPVPFPSGSAGPGPR GGCGGGGSGGGGAPRREPVPFPSGSAGPGP EPVPFPSGSAGPGPRGPRATESGKRMDCPA R R E P R G 1 2 0 0 0 0 1 3 0 0 0 0 0 1 5 2 0 0 0 1 0 0 16 1 1606.8216 Q9UBB5;X6RBL6;A0A024R2B8 Q9UBB5 124 139 MBD2 Methyl-CpG-binding domain protein 2 yes no 3 0.00041526 37.083 1 0.98617 1.4927 NaN 1 Median NaN NaN NaN 0 0 Median 0.98617 1.4927 NaN 1 0 Median 10559000 5644000 4914800 0 0 0 10559000 5644000 4914800 2073 947 2243 3373 5487;5488 5487 2 RESESESDETPPAAPQLIK APQVVAEAAKTAKRKRESESESDETPPAAP SESDETPPAAPQLIKKEKKKSKKDKKAKAG K R E I K K 2 1 0 1 0 1 4 0 0 1 1 1 0 0 3 3 1 0 0 0 0 0 19 1 2083.0069 O60832 O60832 449 467 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 2 7.3203E-08 60.062 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2074 706 2244;2245 3374;3375 5489;5490;5491 5490 1050;1051;1052 0 RESEVLDLK GPEIQLEVTQRALLRRESEVLDLKEQLEKM QRALLRRESEVLDLKEQLEKMKGDLESKNE R R E L K E 0 1 0 1 0 0 2 0 0 0 2 1 0 0 0 1 0 0 0 1 0 0 9 1 1087.5873 O95613 O95613 1651 1659 PCNT Pericentrin yes yes 2 0.0018548 58.37 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2075 721 2246 3376 5492 5492 1104 0 RETFVQAVSK ______________________________ ______________________________ K R E S K E 1 1 0 0 0 1 1 0 0 0 0 1 0 1 0 1 1 0 0 2 0 0 10 1 1163.6299 B3KRQ2;Q86XI2;F8WE06 B3KRQ2 4 13 NCAPG2 Condensin-2 complex subunit G2 yes no 2 0.010113 47.894 1 0.601 0.91728 NaN 1 Median NaN NaN NaN 0 0 Median 0.601 0.91728 NaN 1 0 Median 30085000 18658000 11427000 0 0 0 30085000 18658000 11427000 2076 441 2247 3377 5493 5493 1 RFDDAVVQSDMK NPTNTVFDAKRLIGRRFDDAVVQSDMKHWP IGRRFDDAVVQSDMKHWPFMVVNDAGRPKV R R F M K H 1 1 0 3 0 1 0 0 0 0 0 1 1 1 0 1 0 0 0 2 0 0 12 1 1409.6609 E9PKE3;V9HW22;Q53GZ6;P11142;Q53HF2;E9PNE6;Q96IS6;E9PN89;E9PN25;E9PPY6;E9PQQ4;E9PQK7;E9PK54;E9PLF4;B4DTX2;A4D111 E9PKE3 77 88 HSPA8;HEL-S-72p;LOC401308 Heat shock cognate 71 kDa protein yes no 2;3 0.00021296 81.92 2 1.3814 2.0729 1.1594 2 Median NaN NaN NaN 0 0 Median 1.3814 2.0729 1.1594 2 0 Median 53659000 21552000 32107000 0 0 0 53659000 21552000 32107000 2077 623 2248 3378;3379 5494;5495;5496 5495 132 3 RFDEATQLR CVQMTKEVQKAMDDKRFDEATQLRGGSFEN KAMDDKRFDEATQLRGGSFENNWNIYKLLA K R F L R G 1 2 0 1 0 1 1 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 9 1 1134.5782 Q9BSP4;Q7L2M7;P17858 Q9BSP4 72 80 PFKL ATP-dependent 6-phosphofructokinase, liver type yes no 2 0.0056345 58.592 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 16733000 0 16733000 0 0 0 16733000 0 16733000 2078 742 2249 3380 5497 5497 1 RFEIINAIYEPTEEECEWKPDEEDEISEELK LERKYAVLYQPLFDKRFEIINAIYEPTEEE EWKPDEEDEISEELKEKAKIEDE_______ K R F L K E 1 1 1 2 1 0 11 0 0 4 1 2 0 1 2 1 1 1 1 0 0 0 31 2 3868.7513 F8VRJ2;F8W118;F8VY35;F8VV59;A0A024RBE6;F5H4R6;H0YIV4;A0A024RBB7;P55209;H0YH88;F8W543 F8VRJ2 76 106 NAP1L1 Nucleosome assembly protein 1-like 1 yes no 4 0.0182 10.047 1 0.23388 0.32908 NaN 1 Median NaN NaN NaN 0 0 Median 0.23388 0.32908 NaN 1 0 Median 5786400 4302900 1483500 0 0 0 5786400 4302900 1483500 2079 139 2250 3381 5498 5498 1 RFPGYDSESK KGAVDGGLSIPHSTKRFPGYDSESKEFNAE PHSTKRFPGYDSESKEFNAEVHRKHIMGQN K R F S K E 0 1 0 1 0 0 1 1 0 0 0 1 0 1 1 2 0 0 1 0 0 0 10 1 1184.5462 A2RUM7;Q59GX9;P46777;B3KTM6 A2RUM7 179 188 RPL5 60S ribosomal protein L5 yes no 2 2.8682E-28 125.71 1 1 0.6622 0.95347 1.4297 2 Median 0.72446 0.94388 NaN 1 0 Median 0.60529 0.96316 NaN 1 0 Median 194020000 121130000 72888000 34572000 21228000 13344000 159440000 99900000 59544000 2080 306 2251 3382;3383 5499;5500;5501;5502;5503 5500 5 RFSFCCSPEPEAEAEAAAGPGPCER KAYLLGKEDAAREIRRFSFCCSPEPEAEAE EAEAEAAAGPGPCERLLSRVAALFPALRPG R R F E R L 5 2 0 0 3 0 5 2 0 0 0 0 0 2 4 2 0 0 0 0 0 0 25 1 2781.1581 E7EMC7;Q13501;E3W990;B4DE82;E3WH17;D6RBF1;C9J6J8 E7EMC7 22 46 SQSTM1;SQSTM1-ALK Sequestosome-1;Tyrosine-protein kinase receptor yes no 3 5.902E-14 53.545 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2081 605 2252 3384 5504 5504 902 0 RFSPPR TATAVLAPWPRPPPRRFSPPRRMLPPPPMW APWPRPPPRRFSPPRRMLPPPPMWRRSPPR R R F P R R 0 2 0 0 0 0 0 0 0 0 0 0 0 1 2 1 0 0 0 0 0 0 6 1 758.41876 H3BPG5;H3BV80;H3BMM9;H3BTC0;D3DU92;A0A024R9P1;Q15287 H3BPG5 72 77 RNPS1;hCG_2026745 RNA-binding protein with serine-rich domain 1 yes no 2 0.0054488 54.157 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2082 119 2253 3385;3386 5505;5506 5505 170 0 RFSPPRR TATAVLAPWPRPPPRRFSPPRRMLPPPPMW PWPRPPPRRFSPPRRMLPPPPMWRRSPPRM R R F R R M 0 3 0 0 0 0 0 0 0 0 0 0 0 1 2 1 0 0 0 0 0 0 7 2 914.51987 H3BPG5;H3BV80;H3BMM9;H3BTC0;D3DU92;A0A024R9P1;Q15287 H3BPG5 72 78 RNPS1;hCG_2026745 RNA-binding protein with serine-rich domain 1 yes no 3 0.017885 47.198 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2083 119 2254 3387;3388 5507;5508 5507 170 0 RFSQMLQDK GKPKSGRVWKDRSKKRFSQMLQDKPLRTSW KDRSKKRFSQMLQDKPLRTSWQRKMKERQE K R F D K P 0 1 0 1 0 2 0 0 0 0 1 1 1 1 0 1 0 0 0 0 0 0 9 1 1151.5757 Q9H6F5 Q9H6F5 253 261 CCDC86 Coiled-coil domain-containing protein 86 yes yes 2 0.003079 47.853 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2084 927 2255 3389 5509 5509 216 1 RFVGHTK GTLRLWDLTTGTTTRRFVGHTKDVLSVAFS LTTGTTTRRFVGHTKDVLSVAFSSDNRQIV R R F T K D 0 1 0 0 0 0 0 1 1 0 0 1 0 1 0 0 1 0 0 1 0 0 7 1 843.47152 E9KL35;P63244;D6RFX4;D6RFZ9;H0YAF8;B4DVD2;D6RHH4;D6R9Z1;H0YAM7;J3KPE3;H0Y8W2;D6R9L0;D6RAU2;E9PD14 E9KL35 100 106 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 2 0.021312 41.502 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2085 610 2256 3390 5510 5510 1 RFYDLSDSDSNLSGEDSK KRGRPISHSTTEDLKRFYDLSDSDSNLSGE DLSDSDSNLSGEDSKALSQKKIKKKKTQTK K R F S K A 0 1 1 4 0 0 1 1 0 0 2 1 0 1 0 5 0 0 1 0 0 0 18 1 2033.8814 Q9H501;Q8IWH6;Q05C10;Q3SWV1;Q6P6H6 Q9H501 70 87 ESF1 ESF1 homolog yes no 2 1.3294E-17 71.742 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2086 926 2257;2258;2259 3391;3392;3393 5511;5512;5513 5513 1610;1611;1612;1613 0 RGAPAAATAPAPTAHK SFKLNRKKLEGGGERRGAPAAATAPAPTAH GAPAAATAPAPTAHKAKKAAPGAAGSRRAD R R G H K A 7 1 0 0 0 0 0 1 1 0 0 1 0 0 3 0 2 0 0 0 0 0 16 1 1486.8005 Q92522 Q92522 128 143 H1FX Histone H1x yes yes 3 2.4264E-07 75.574 1 1 0.62236 0.88064 9.7361 2 Median 0.73631 0.9434 NaN 1 0 Median 0.52605 0.82205 NaN 1 0 Median 80746000 52466000 28280000 7943100 4649700 3293400 72802000 47816000 24987000 2087 898 2260 3394;3395 5514;5515;5516;5517 5517 4 RGEEGHDPKEPEQLR PPGRPQPDSGRRRRRRGEEGHDPKEPEQLR RGEEGHDPKEPEQLRKLFIGGLSFETTDDS R R G L R K 0 2 0 1 0 1 4 2 1 0 1 1 0 0 2 0 0 0 0 0 0 0 15 2 1775.8551 P51991;B4E036 P51991 21 35 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes no 4 0.00072474 34.485 1 0.50147 0.5997 NaN 1 Median 0.50147 0.5997 NaN 1 0 Median NaN NaN NaN 0 0 Median 5145000 3503100 1641900 5145000 3503100 1641900 0 0 0 2088 774 2261 3396 5518 5518 1 RGEEGHDPKEPEQLRK PPGRPQPDSGRRRRRRGEEGHDPKEPEQLR GEEGHDPKEPEQLRKLFIGGLSFETTDDSL R R G R K L 0 2 0 1 0 1 4 2 1 0 1 2 0 0 2 0 0 0 0 0 0 0 16 3 1903.95 P51991;B4E036 P51991 21 36 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes no 4 0.0058548 19.071 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1902700 1902700 0 1902700 1902700 0 0 0 0 2089 774 2262 3397 5519 5519 1 RGESLDNLDSPR ASVNKEPVSLPGIMRRGESLDNLDSPRSNS IMRRGESLDNLDSPRSNSWRQPPWLNQPTG R R G P R S 0 2 1 2 0 0 1 1 0 0 2 0 0 0 1 2 0 0 0 0 0 0 12 1 1357.6586 E9PMS6;B7Z8W3;A0A1P7ZIM8;A0A0A0MTE2;E9PMT2;F8WD26;F8J2B5;J3KP06;Q8WWI1 E9PMS6 1099 1110 LMO7 LIM domain only protein 7 yes no 3 4.2495E-05 89.506 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2090 227 2263 3398 5520;5521 5521 318 0 RGEYIYTGNAK VDDDSDLNVVASFDRRGEYIYTGNAKGKIL SFDRRGEYIYTGNAKGKILVLKTDSQDLVA R R G A K G 1 1 1 0 0 0 1 2 0 1 0 1 0 0 0 0 1 0 2 0 0 0 11 1 1270.6306 B4DLF8;A0A024R9B5;B4DMM7;Q15291 B4DLF8 35 45 RBBP5 Retinoblastoma-binding protein 5 yes no 2 0.028413 35.541 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3186700 3186700 0 0 0 0 3186700 3186700 0 2091 112 2264 3399 5522 5522 1 RGHREEEQEDLTK KNAKKGPSTPYTKSKRGHREEEQEDLTKDM SKRGHREEEQEDLTKDMDEPSPVPNVEEVT K R G T K D 0 2 0 1 0 1 4 1 1 0 1 1 0 0 0 0 1 0 0 0 0 0 13 2 1625.7758 B4DF22;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2 B4DF22 218 230 SMARCC2 SWI/SNF complex subunit SMARCC2 yes no 4 0.015364 18.413 1 0.5323 0.64773 NaN 1 Median 0.5323 0.64773 NaN 1 0 Median NaN NaN NaN 0 0 Median 7141100 4443300 2697800 7141100 4443300 2697800 0 0 0 2092 137 2265 3400 5523 5523 1 RGILTLK MGQKDSYVGDEAQSKRGILTLKYPIEHGIV VGDEAQSKRGILTLKYPIEHGIVTNWDDME K R G L K Y 0 1 0 0 0 0 0 1 0 1 2 1 0 0 0 0 1 0 0 0 0 0 7 1 799.52797 P63261;B4E3A4;Q8WVW5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4DVQ0;B4E335;I3L3I0;I3L1U9;B3KUD3;B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;I3L4N8;B4DUI8;B3KW67;A8K3K1;Q7Z7J6;A6NL76;Q13707;Q6S8J3;A5A3E0;K7EM38;I3L3R2;J3KT65;L0R5C4;P0CG39;P0CG38;A1E282;G5E9R0;E7EVS6;C9JTX5;C9JUM1;C9JZR7;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;B7Z6I1 P63261 62 68 ACTG1;PS1TP5BP1;ACTB;ACTA2;ACTG2;ACTA1;ACTC1;POTEE;POTEF;POTEM;POTEJ;POTEI Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member J;POTE ankyrin domain family member I yes no 2 0.028627 62.717 1 0.6973 0.89365 NaN 1 Median 0.6973 0.89365 NaN 1 0 Median NaN NaN NaN 0 0 Median 7987800 5143700 2844000 7987800 5143700 2844000 0 0 0 2093 794 2266 3401 5524 5524 1 RGPCIIYNEDNGIIK RAGKGKMRNRRRIQRRGPCIIYNEDNGIIK RGPCIIYNEDNGIIKAFRNIPGITLLNVSK R R G I K A 0 1 2 1 1 0 1 2 0 4 0 1 0 0 1 0 0 0 1 0 0 0 15 1 1760.888 Q59GY2;P36578;H3BM89;B4DMJ6;B4DMJ2;Q53G74;B4DFI6 Q59GY2 219 233 RPL4 60S ribosomal protein L4 yes no 3 0.013408 27.029 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2094 755 2267 3402 5525 5525 1 RGPPPPPR IKVEQATKPSFESGRRGPPPPPRSRGPPRG PSFESGRRGPPPPPRSRGPPRGLRGGRGGS R R G P R S 0 2 0 0 0 0 0 1 0 0 0 0 0 0 5 0 0 0 0 0 0 0 8 1 872.49807 B4E352;P38159;H0Y6E7;H3BT71 B4E352 55 62 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed yes no 2 0.0084028 65.676 1 0.26134 0.44823 NaN 1 Median NaN NaN NaN 0 0 Median 0.26134 0.44823 NaN 1 0 Median 38390000 30172000 8218100 0 0 0 38390000 30172000 8218100 2095 522 2268 3403 5526 5526 1 RGRPAATEVK VTTATASVNLKVSPKRGRPAATEVKIPKPR KVSPKRGRPAATEVKIPKPRGRPKMVKQPC K R G V K I 2 2 0 0 0 0 1 1 0 0 0 1 0 0 1 0 1 0 0 1 0 0 10 2 1083.6149 O75475;Q05CM9 O75475 180 189 PSIP1 PC4 and SFRS1-interacting protein yes no 3 0.0103 36.424 1 0.51834 0.69339 NaN 1 Median NaN NaN NaN 0 0 Median 0.51834 0.69339 NaN 1 0 Median 17491000 9616000 7874900 0 0 0 17491000 9616000 7874900 2096 710 2269 3404 5527 5527 1 RGSLTLTISGESPK VPERRSSPVPPVPERRGSLTLTISGESPKA RRGSLTLTISGESPKAGPAEEGPSGPMEVL R R G P K A 0 1 0 0 0 0 1 2 0 1 2 1 0 0 1 3 2 0 0 0 0 0 14 1 1444.7886 J3KPS2;Q6ZRV2 J3KPS2 661 674 FAM83H Protein FAM83H yes no 2 0.00025967 58.159 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2097 679 2270 3405 5528 5528 1010;1011 0 RGSPTTGFIEQK YPERKGSPTPGFSTRRGSPTTGFIEQKGSP STRRGSPTTGFIEQKGSPTSAYPERRGSPV R R G Q K G 0 1 0 0 0 1 1 2 0 1 0 1 0 1 1 1 2 0 0 0 0 0 12 1 1319.6834 J3KPS2;Q6ZRV2 J3KPS2 617 628 FAM83H Protein FAM83H yes no 2 0.0023382 50.659 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2098 679 2271 3406 5529;5530 5529 1012 0 RGSPVPPVPER FIEQKGSPTSAYPERRGSPVPPVPERRSSP YPERRGSPVPPVPERRSSPVPPVPERRGSL R R G E R R 0 2 0 0 0 0 1 1 0 0 0 0 0 0 4 1 0 0 0 2 0 0 11 1 1189.6568 J3KPS2;Q6ZRV2 J3KPS2 639 649 FAM83H Protein FAM83H yes no 2 0.0047972 43.635 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2099 679 2272 3407 5531 5531 1013 0 RGTHQLYSTSHDR TFTGHRDAVSGLAFRRGTHQLYSTSHDRSV FRRGTHQLYSTSHDRSVKVWNVAENSYVET R R G D R S 0 2 0 1 0 1 0 1 2 0 1 0 0 0 0 2 2 0 1 0 0 0 13 1 1556.7444 O43818 O43818 251 263 RRP9 U3 small nucleolar RNA-interacting protein 2 yes yes 4 0.0058316 24.558 1 0.6471 0.83199 NaN 1 Median 0.6471 0.83199 NaN 1 0 Median NaN NaN NaN 0 0 Median 8389300 4462800 3926500 8389300 4462800 3926500 0 0 0 2100 703 2273 3408 5532 5532 1 RGYFNEELSEILSDPSDDTK DPKESHRLPVDIAYKRGYFNEELSEILSDP EELSEILSDPSDDTKGFFDPNTEENLTYLQ K R G T K G 0 1 1 3 0 0 3 1 0 1 2 1 0 1 1 3 1 0 1 0 0 0 20 1 2314.0601 Q4LE79;P15924 Q4LE79 1842 1861 DSP variant protein;DSP Desmoplakin yes no 3 0.020631 13.592 1 0.50577 0.61125 NaN 1 Median NaN NaN NaN 0 0 Median 0.50577 0.61125 NaN 1 0 Median 3302200 1904200 1398000 0 0 0 3302200 1904200 1398000 2101 737 2274 3409 5533 5533 1 RHATAEEVEEEERDR KKPKRNEIDAEPPAKRHATAEEVEEEERDR RHATAEEVEEEERDRIPGPVCKGKWKNKER K R H D R I 2 3 0 1 0 0 6 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 15 2 1854.8456 Q8TDN6;Q9NUW4;B4E0B8 Q8TDN6 32 46 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog yes no 4 0.00079296 33.685 3 0.80917 1.0526 20.131 3 Plateau 0.80917 1.0526 20.131 3 0 Plateau NaN NaN NaN 0 0 Median 33562000 18458000 15103000 33562000 18458000 15103000 0 0 0 2102 890 2275 3410;3411;3412 5534;5535;5536;5537;5538 5535 4 RHEAFEK REIGQSVDEVEKLIKRHEAFEKSAATWDER DEVEKLIKRHEAFEKSAATWDERFSALERL K R H E K S 1 1 0 0 0 0 2 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 7 1 915.45626 D6W5C0;K9MS24;B2ZZ89;A0A087WUZ3;Q01082;B4DIF8;Q71VF8;Q8WX82;H0YJE6;B2RMN7;A0A024R674;Q59FP5;P11277 D6W5C0 1972 1978 SPTBN1;HSpTB1;SPTB Spectrin beta chain, non-erythrocytic 1;Spectrin beta chain, erythrocytic yes no 3 0.025396 23.575 1 0.84646 1.1044 NaN 1 Median 0.84646 1.1044 NaN 1 0 Median NaN NaN NaN 0 0 Median 26286000 13499000 12787000 26286000 13499000 12787000 0 0 0 2103 185 2276 3413 5539 5539 1 RHLTGEFEK VLVGDGGTGKTTFVKRHLTGEFEKKYVATL KTTFVKRHLTGEFEKKYVATLGVEVHPLVF K R H E K K 0 1 0 0 0 0 2 1 1 0 1 1 0 1 0 0 1 0 0 0 0 0 9 1 1115.5724 H0YFC6;F5H018;B5MDF5;J3KQE5;P62826 H0YFC6 44 52 RAN GTP-binding nuclear protein Ran yes no 3 0.028077 18.268 1 0.61328 0.78935 NaN 1 Median 0.61328 0.78935 NaN 1 0 Median NaN NaN NaN 0 0 Median 9271000 5379300 3891700 9271000 5379300 3891700 0 0 0 2104 534 2277 3414 5540 5540 1 RHQLVHTGEK CAECGKAFVESSKLKRHQLVHTGEKPFQCT SSKLKRHQLVHTGEKPFQCTFEGCGKRFSL K R H E K P 0 1 0 0 0 1 1 1 2 0 1 1 0 0 0 0 1 0 0 1 0 0 10 1 1203.6473 P25490;O15391 P25490 342 351 YY1;YY2 Transcriptional repressor protein YY1;Transcription factor YY2 yes no 3 0.0010057 49.489 1 0.61184 0.78648 NaN 1 Median 0.61184 0.78648 NaN 1 0 Median NaN NaN NaN 0 0 Median 8602100 5159900 3442200 8602100 5159900 3442200 0 0 0 2105 749 2278 3415 5541;5542 5541 2 RHREELEQSK HLCQQLQAEQAAAEKRHREELEQSKQAAGG AAAEKRHREELEQSKQAAGGLRAELLRAQR K R H S K Q 0 2 0 0 0 1 3 0 1 0 1 1 0 0 0 1 0 0 0 0 0 0 10 2 1310.6691 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q59HB8;Q96HN5;H0YFY6;Q7Z757;A0A024R5G4 A0A087WY61 1378 1387 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 yes no 3 0.012471 33.89 1 0.6548 0.79599 NaN 1 Median 0.6548 0.79599 NaN 1 0 Median NaN NaN NaN 0 0 Median 6996700 4084400 2912300 6996700 4084400 2912300 0 0 0 2106 71 2279 3416 5543 5543 1 RIACEEEFSDSEEEGEGGRK EDDPDKRISICSSDKRIACEEEFSDSEEEG EEFSDSEEEGEGGRKNSSNFKKAKRVKTED K R I R K N 1 2 0 1 1 0 7 3 0 1 0 1 0 1 0 2 0 0 0 0 0 0 20 2 2312.9815 Q6IT96;B5BU61;Q13547;B4DRG0;Q5HYD4 Q6IT96 413 432 HDAC1;DKFZp686H12203 Histone deacetylase;Histone deacetylase 1 yes no 3;4 6.0815E-12 60.134 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1824300 1824300 0 1824300 1824300 0 0 0 0 2107 528 2280;2281;2282 3417;3418;3419 5544;5545;5546 5546 765;766 1 RIAELSEDDQK INKPLIVVANKCDVKRIAELSEDDQKIFTD CDVKRIAELSEDDQKIFTDLQSEGFPVIET K R I Q K I 1 1 0 2 0 1 2 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 11 1 1302.6416 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 293 303 GTPBP4 Nucleolar GTP-binding protein 1 yes no 2 0.0018623 76.843 1 1 0.65147 0.92542 20.172 2 Median 0.62264 0.8024 NaN 1 0 Median 0.68162 1.0673 NaN 1 0 Median 89363000 52070000 37293000 9955400 5598500 4356900 79407000 46471000 32936000 2108 585 2283 3420;3421 5547;5548;5549 5549 2 RIDISPSTFR EQEAAKNKKSPEIHRRIDISPSTFRKHGLA PEIHRRIDISPSTFRKHGLAHDEMKSPREP R R I F R K 0 2 0 1 0 0 0 0 0 2 0 0 0 1 1 2 1 0 0 0 0 0 10 1 1190.6408 Q9Y2W1 Q9Y2W1 678 687 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 0.0022065 56.122 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2109 963 2284 3422 5550 5550 1743 0 RIDISPSTLR TEEHSTRQKSPEIHRRIDISPSTLRKHTRL PEIHRRIDISPSTLRKHTRLAGEERVFKKK R R I L R K 0 2 0 1 0 0 0 0 0 2 1 0 0 0 1 2 1 0 0 0 0 0 10 1 1156.6564 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8 Q6DCA8 654 663 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 0.00073362 67.118 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2110 622 2285 3423 5551 5551 950 0 RIEEFLAQFQSLDETKEEEDASGSQPK VFKSYCENHLGSTAKRIEEFLAQFQSLDET DETKEEEDASGSQPKGLQKTDLYHLQKVRS K R I P K G 2 1 0 2 0 3 6 1 0 1 2 2 0 2 1 3 1 0 0 0 0 0 27 2 3110.468 B7Z8A5;B4E014;Q9UBD5 B7Z8A5 493 519 ORC3 Origin recognition complex subunit 3 yes no 4 0.0037918 16.805 1 0.31815 0.44692 NaN 1 Median NaN NaN NaN 0 0 Median 0.31815 0.44692 NaN 1 0 Median 4413900 3075500 1338300 0 0 0 4413900 3075500 1338300 2111 514 2286 3424 5552;5553;5554 5554 3 RIEPAEELNSNDMK EPVVIMKRSLRTSAKRIEPAEELNSNDMKT KRIEPAEELNSNDMKTNKEEHKLQDSVPEN K R I M K T 1 1 2 1 0 0 3 0 0 1 1 1 1 0 1 1 0 0 0 0 0 0 14 1 1644.7777 P46013 P46013 3058 3071 MKI67 Antigen KI-67 yes yes 3 2.6524E-05 80.632 1 0.88599 1.3948 NaN 1 Median NaN NaN NaN 0 0 Median 0.88599 1.3948 NaN 1 0 Median 100280000 53509000 46773000 0 0 0 100280000 53509000 46773000 2112 762 2287 3425 5555 5555 180 1 RIGLFNSSADR NMLDDSSDPILTTIRRIGLFNSSADRVKVI TTIRRIGLFNSSADRVKVIFHPEFLSSTSP R R I D R V 1 2 1 1 0 0 0 1 0 1 1 0 0 1 0 2 0 0 0 0 0 0 11 1 1234.6418 B7Z806;B7Z6I6;Q53ER0;A8K6K7;P13807;B7Z255 B7Z806 382 392 GYS1 Glycogen [starch] synthase, muscle yes no 3 0.02566 19.843 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1265200 1265200 0 0 0 0 1265200 1265200 0 2113 364 2288 3426 5556 5556 1 RIGVPSATEIIK YQLVQVEQKAGIKFKRIGVPSATEIIKASS KFKRIGVPSATEIIKASSKDAIRLLDSVPP K R I I K A 1 1 0 0 0 0 1 1 0 3 0 1 0 0 1 1 1 0 0 1 0 0 12 1 1282.7609 Q9NR30 Q9NR30 562 573 DDX21 Nucleolar RNA helicase 2 yes yes 2 0.0052632 40.475 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2114 934 2289 3427 5557 5557 1649;2048 0 RIHFSPSEPK VRVAITEHTEVREIKRIHFSPSEPKTSAVK VREIKRIHFSPSEPKTSAVKKTKNVTTPIS K R I P K T 0 1 0 0 0 0 1 0 1 1 0 1 0 1 2 2 0 0 0 0 0 0 10 1 1196.6302 B3KWI2;Q8IZT6 B3KWI2 601 610 ASPM Abnormal spindle-like microcephaly-associated protein yes no 3 0.0025873 40.725 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2115 450 2290 3428 5558 5558 657 0 RIIYDSDSESEETLQVK RKEDDFKQKQPSKKKRIIYDSDSESEETLQ IYDSDSESEETLQVKNAKKPPEKLPVSSKP K R I V K N 0 1 0 2 0 1 3 0 0 2 1 1 0 0 0 3 1 0 1 1 0 0 17 1 2010.9746 E0CX09;D6RAD2;P35251 E0CX09 64 80 RFC1 Replication factor C subunit 1 yes no 2 3.039E-15 103.5 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2116 596 2291 3429;3430 5559;5560;5561 5560 890;891 0 RILELSGSSSEDSEK SEPACLAEIEEDKARRILELSGSSSEDSEK RILELSGSSSEDSEKVIAGLYQRAFQHLSE R R I E K V 0 1 0 1 0 0 3 1 0 1 2 1 0 0 0 5 0 0 0 0 0 0 15 1 1635.7952 P78527 P78527 3358 3372 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 3 0.0054557 32.815 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2759300 2759300 0 2759300 2759300 0 0 0 0 2117 795 2292 3431 5562 5562 1 RILGGR TKQDCGRRPAARMNKRILGGRTSRPGRWPW RRPAARMNKRILGGRTSRPGRWPWQCSLQS K R I G R T 0 2 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 6 1 670.42384 E7EQE7;B4DZA3;A0A087X1D5;J3KR88;B4E1Y7;J3KR90;Q9Y5Q5 E7EQE7 662 667 CORIN Atrial natriuretic peptide-converting enzyme;Atrial natriuretic peptide-converting enzyme, N-terminal propeptide;Atrial natriuretic peptide-converting enzyme, activated protease fragment;Atrial natriuretic peptide-converting enzyme, 180 kDa soluble fragment;Atrial natriuretic peptide-converting enzyme, 160 kDa soluble fragment;Atrial natriuretic peptide-converting enzyme, 100 kDa soluble fragment yes no 2 0.0014963 65.331 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2199700 2199700 0 2199700 2199700 0 0 0 0 2118 207 2293 3432 5563 5563 1 RIPVSPEQAR VDQAIWSKKMSNGTRRIPVSPEQARSYNKQ SNGTRRIPVSPEQARSYNKQMRPAILDHCS R R I A R S 1 2 0 0 0 1 1 0 0 1 0 0 0 0 2 1 0 0 0 1 0 0 10 1 1151.6411 C9J7L6;Q9H981 C9J7L6 17 26 ACTR8 Actin-related protein 8 yes no 2 0.0021006 60.49 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2119 559 2294 3433;3434;3435 5564;5565;5566 5564 838 0 RIQDPTEDAEAEDTPRK EDSGNVNGKKRNHTKRIQDPTEDAEAEDTP QDPTEDAEAEDTPRKRLRTDKHSLRKRDTI K R I R K R 2 2 0 3 0 1 3 0 0 1 0 1 0 0 2 0 2 0 0 0 0 0 17 2 1969.9341 Q05CW4;H0Y9L4;O96028 O96028 531 547 WHSC1 Histone-lysine N-methyltransferase NSD2 no no 3 5.1984E-08 80.412 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 6068100 0 6068100 0 0 0 6068100 0 6068100 2120 724;800 2295;2296 3436;3437 5567;5568 5567 1955 1 RISGLIYEETR TKPAIRRLARRGGVKRISGLIYEETRGVLK GGVKRISGLIYEETRGVLKVFLENVIRDAV K R I T R G 0 2 0 0 0 0 2 1 0 2 1 0 0 0 0 1 1 0 1 0 0 0 11 1 1335.7147 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 46 56 HIST1H4H;HIST1H4A Histone H4 yes no 2;3 1.4476E-81 153.94 7 12 0.64028 0.97037 12.419 16 Median 0.66063 0.86934 4.3807 4 0 Median 0.62787 1.0221 10.969 12 0 Median 4083000000 2486900000 1596200000 1292000000 755710000 536300000 2791000000 1731200000 1059900000 2121 400 2297;2298 3438;3439;3440;3441;3442;3443;3444;3445;3446;3447;3448;3449;3450;3451;3452;3453;3454;3455;3456 5569;5570;5571;5572;5573;5574;5575;5576;5577;5578;5579;5580;5581;5582;5583;5584;5585;5586;5587;5588;5589;5590;5591;5592;5593;5594;5595;5596;5597;5598;5599;5600;5601;5602;5603;5604;5605;5606;5607;5608;5609;5610;5611;5612;5613;5614;5615;5616;5617;5618;5619;5620 5570 595 49 RISTITALGHEGK EFLKDEIKQEEETCKRISTITALGHEGKQL CKRISTITALGHEGKQLVNGEVSDERVAPN K R I G K Q 1 1 0 0 0 0 1 2 1 2 1 1 0 0 0 1 2 0 0 0 0 0 13 1 1381.7678 Q96T23;H0YER1;H0YCN2 Q96T23 427 439 RSF1 Remodeling and spacing factor 1 yes no 3 0.0094563 31.389 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2122 910 2299 3457 5621 5621 1 RITNEQEETYSLSQSSGK EQGDRENVLCNKKEKRITNEQEETYSLSQS NEQEETYSLSQSSGKFHQESKFDKGQNSLT K R I G K F 0 1 1 0 0 2 3 1 0 1 1 1 0 0 0 4 2 0 1 0 0 0 18 1 2055.9709 B7Z7S9;Q562F6 B7Z7S9 495 512 SGOL2 Shugoshin-like 2 yes no 3 5.7816E-11 76.301 1 1 0.86304 1.1262 5.3966 2 Median 0.89899 1.17 NaN 1 0 Median 0.82852 1.084 NaN 1 0 Median 23782000 11513000 12270000 16326000 8112200 8213600 7456400 3400300 4056100 2123 543 2300 3458;3459 5622;5623;5624;5625;5626 5622 5 RKAEEDAALQAK DIYTHWQQTSELGRKRKAEEDAALQAKKTR GRKRKAEEDAALQAKKTRVSDPISTSESSE K R K A K K 4 1 0 1 0 1 2 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 12 2 1328.7048 E7ETY2;J3KQ96;Q13428;B4DLB1;H0YA99 E7ETY2 63 74 TCOF1 Treacle protein yes no 3 0.01192 38.178 1 1.1671 1.6512 NaN 1 Median NaN NaN NaN 0 0 Median 1.1671 1.6512 NaN 1 0 Median 12780000 5017200 7762600 0 0 0 12780000 5017200 7762600 2124 608 2301 3460 5627 5627 0 RKASGPPVSELITK TPVKKKARKSAGAAKRKASGPPVSELITKV KRKASGPPVSELITKVVAASKERSGVSLAA K R K T K V 1 1 0 0 0 0 1 1 0 1 1 2 0 0 2 2 1 0 0 1 0 0 14 2 1481.8566 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402 Q4VB24 33 46 HIST1H1E;HIST1H1D Histone H1.4;Histone H1.3 yes no 2;3 9.2631E-33 128.05 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2125 308 2302 3461;3462;3463 5628;5629;5630;5631;5632;5633 5629 457;458 0 RKDDEDSFR IMLAVGEVEDSIFKKRKDDEDSFRRRQKEK DSIFKKRKDDEDSFRRRQKEKRKRMKRDQP K R K F R R 0 2 0 3 0 0 1 0 0 0 0 1 0 1 0 1 0 0 0 0 0 0 9 2 1166.5316 B4E0B9;B4DZC3;B3KMC9;Q9H0D6 B4E0B9 331 339 XRN2 5-3 exoribonuclease 2 yes no 3 0.0014385 60.064 1 0.53043 0.6368 NaN 1 Median 0.53043 0.6368 NaN 1 0 Median NaN NaN NaN 0 0 Median 5533700 3028800 2504900 5533700 3028800 2504900 0 0 0 2126 428 2303 3464 5634 5634 1 RKEEAEQLRR CSFVEKERQRLENLRRKEEAEQLRRQKVEE LENLRRKEEAEQLRRQKVEEDKRRRLEEVK R R K R R Q 1 3 0 0 0 1 3 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 10 3 1313.7164 Q9NQS7;B3KPD3 Q9NQS7 547 556 INCENP Inner centromere protein yes no 3;4 0.0009198 46.706 2 0.87503 1.065 6.7087 2 Median 0.87503 1.065 6.7087 2 0 Median NaN NaN NaN 0 0 Median 336200000 181400000 154800000 336200000 181400000 154800000 0 0 0 2127 932 2304 3465;3466 5635;5636;5637 5636 3 RKGDEVDGVDEVAK EALKKQLPGVKSEGKRKGDEVDGVDEVAKK KRKGDEVDGVDEVAKKKSKKEKDKDSKLEK K R K A K K 1 1 0 3 0 0 2 2 0 0 0 2 0 0 0 0 0 0 0 3 0 0 14 2 1515.7529 A0A024R3T8;P09874;B2R5W3;B4E0E1;Q05D33;Q6PJL0;Q96P95 A0A024R3T8 208 221 PARP1 Poly [ADP-ribose] polymerase 1 yes no 2;3 0.0001689 57.328 2 4 0.6149 0.79743 53.115 4 Median 1.0298 1.2285 0.75364 2 0 Median 0.34822 0.49137 8.1106 2 0 Median 156650000 92642000 64007000 118780000 60466000 58310000 37874000 32177000 5697800 2128 56 2305 3467;3468;3469;3470;3471;3472 5638;5639;5640;5641;5642;5643;5644;5645 5638 8 RKGDEVDGVDEVAKK EALKKQLPGVKSEGKRKGDEVDGVDEVAKK RKGDEVDGVDEVAKKKSKKEKDKDSKLEKA K R K K K K 1 1 0 3 0 0 2 2 0 0 0 3 0 0 0 0 0 0 0 3 0 0 15 3 1643.8479 A0A024R3T8;P09874;B2R5W3;B4E0E1;Q05D33;Q6PJL0;Q96P95 A0A024R3T8 208 222 PARP1 Poly [ADP-ribose] polymerase 1 yes no 4 0.0025168 26.771 1 0.95054 1.2273 NaN 1 Median 0.95054 1.2273 NaN 1 0 Median NaN NaN NaN 0 0 Median 13163000 5680800 7482200 13163000 5680800 7482200 0 0 0 2129 56 2306 3473 5646;5647 5647 2 RKIEQVDKEDEITEK YDPSGDSTLPTCSKKRKIEQVDKEDEITEK RKIEQVDKEDEITEKKAKKAKIKVKVEEEE K R K E K K 0 1 0 2 0 1 4 0 0 2 0 3 0 0 0 0 1 0 0 1 0 0 15 3 1858.9636 Q9Y2X3;B3KN82 Q9Y2X3 443 457 NOP58 Nucleolar protein 58 yes no 4 0.00081222 33.301 1 0.68271 0.88145 NaN 1 Median 0.68271 0.88145 NaN 1 0 Median NaN NaN NaN 0 0 Median 20953000 12131000 8821800 20953000 12131000 8821800 0 0 0 2130 964 2307 3474 5648;5649 5649 2 RKLDAEDVIGSR VGEGKGTKAFKQPAKRKLDAEDVIGSRRQP PAKRKLDAEDVIGSRRQPRAPKEKAQPLED K R K S R R 1 2 0 2 0 0 1 1 0 1 1 1 0 0 0 1 0 0 0 1 0 0 12 2 1357.7314 P46013 P46013 2891 2902 MKI67 Antigen KI-67 yes yes 3 0.018289 24.935 1 0.88912 1.1381 NaN 1 Median NaN NaN NaN 0 0 Median 0.88912 1.1381 NaN 1 0 Median 7383300 4326600 3056700 0 0 0 7383300 4326600 3056700 2131 762 2308 3475 5650 5650 1 RKLDLNQEEK AIGSTSKPQESPKGKRKLDLNQEEKKTPSK SPKGKRKLDLNQEEKKTPSKPPAQLSPSVP K R K E K K 0 1 1 1 0 1 2 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 10 2 1271.6834 F5H8D7;B4DTD3;B2RCY5;A0A024R0S8;Q59HH7;P18887;M0QYS5;B4DEB2 F5H8D7 215 224 XRCC1 DNA repair protein XRCC1 yes no 3 0.029471 24.465 1 0.73754 0.88503 NaN 1 Median 0.73754 0.88503 NaN 1 0 Median NaN NaN NaN 0 0 Median 6134300 2925600 3208700 6134300 2925600 3208700 0 0 0 2132 21 2309 3476 5651 5651 1 RKLEEEEDGK KPKKIKTEDTKKEKKRKLEEEEDGKLKKPK KKEKKRKLEEEEDGKLKKPKNKDKDKKVPE K R K G K L 0 1 0 1 0 0 4 1 0 0 1 2 0 0 0 0 0 0 0 0 0 0 10 2 1231.6044 P11387;B9EG90 P11387 163 172 TOP1 DNA topoisomerase 1 yes no 3 0.0092951 65.695 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 10609000 10609000 0 0 0 0 10609000 10609000 0 2133 733 2310 3477 5652 5652 1 RKLSLSEGK NSSEERSRPNSGDEKRKLSLSEGKVKKNMG NSGDEKRKLSLSEGKVKKNMGEGKKRVSSG K R K G K V 0 1 0 0 0 0 1 1 0 0 2 2 0 0 0 2 0 0 0 0 0 0 9 2 1016.5978 K7EMM8;D3DUE6;D3DUE7;Q49A26;K7EPU6 K7EMM8 115 123 GLYR1;N-PAC Putative oxidoreductase GLYR1 yes no 2 0.011789 46.844 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2134 592 2311 3478 5653 5653 886;887 0 RKPSTSDDSDSNFEK VSQKPDPAKTKNRRKRKPSTSDDSDSNFEK RKPSTSDDSDSNFEKIVSKAVTSKKSKGES K R K E K I 0 1 1 3 0 0 1 0 0 0 0 2 0 1 1 4 1 0 0 0 0 0 15 2 1711.7649 P11388 P11388 1466 1480 TOP2A DNA topoisomerase 2-alpha yes yes 3 0.00034456 53.169 1 0.67202 0.80184 NaN 1 Median 0.67202 0.80184 NaN 1 0 Median NaN NaN NaN 0 0 Median 36251000 20323000 15928000 36251000 20323000 15928000 0 0 0 2135 734 2312 3479 5654 5654 1 RKRESESESDETPPAAPQLIK VKAPQVVAEAAKTAKRKRESESESDETPPA SESDETPPAAPQLIKKEKKKSKKDKKAKAG K R K I K K 2 2 0 1 0 1 4 0 0 1 1 2 0 0 3 3 1 0 0 0 0 0 21 3 2367.203 O60832 O60832 447 467 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 3 2.0091E-16 78.311 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2136 706 2313;2314 3480;3481 5655;5656 5655 1050;1051;1052 0 RKTSSDDESEEDEDDLLQR QHAMGGVPAWAETTKRKTSSDDESEEDEDD SDDESEEDEDDLLQRTGNFISTSTSLPRGI K R K Q R T 0 2 0 5 0 1 4 0 0 0 2 1 0 0 0 3 1 0 0 0 0 0 19 2 2265.9833 Q9Y5J1;B2RAX6 Q9Y5J1 202 220 UTP18 U3 small nucleolar RNA-associated protein 18 homolog yes no 3 4.5647E-32 114.74 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2137 968 2315 3482;3483;3484 5657;5658;5659;5660;5661 5659 1754;1755;1756;2060 0 RLAQETDIFK QEQIKEKKAAKEEEKRLAQETDIFKKKKRK KEEEKRLAQETDIFKKKKRKGQEDRKSKKK K R L F K K 1 1 0 1 0 1 1 0 0 1 1 1 0 1 0 0 1 0 0 0 0 0 10 1 1219.6561 Q5TBI2;Q8NDD1;Q5TBH9 Q5TBI2 193 202 C1orf131 Uncharacterized protein C1orf131 yes no 2 0.009303 61.593 1 0.81112 1.2122 NaN 1 Median NaN NaN NaN 0 0 Median 0.81112 1.2122 NaN 1 0 Median 24431000 13769000 10662000 0 0 0 24431000 13769000 10662000 2138 847 2316 3485 5662;5663 5662 2 RLDADLAR QLAMQTYEMVDKHIRRLDADLARFEADLKD MVDKHIRRLDADLARFEADLKDKMEGSDFE R R L A R F 2 2 0 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 8 1 928.50903 E9PEN0;A0A1B0GW41;Q8WYH8;B7Z6R2 E9PEN0 99 106 ING5 Inhibitor of growth protein 5 yes no 2 0.0066257 82.287 1 0.67547 1.1707 NaN 1 Median NaN NaN NaN 0 0 Median 0.67547 1.1707 NaN 1 0 Median 50794000 27613000 23181000 0 0 0 50794000 27613000 23181000 2139 288 2317 3486 5664 5664 1 RLEFENQK FEEEKVKRQNEIAKKRLEFENQKTRLGIQL QNEIAKKRLEFENQKTRLGIQLDFEKNQLK K R L Q K T 0 1 1 0 0 1 2 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 8 1 1062.5458 G8JLG1;Q14683;Q6MZR8;A8K7A6;Q6P2R1 G8JLG1 785 792 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 2 0.0079276 66.692 1 0.82615 1.2191 NaN 1 Median NaN NaN NaN 0 0 Median 0.82615 1.2191 NaN 1 0 Median 21553000 12574000 8979000 0 0 0 21553000 12574000 8979000 2140 644 2318 3487 5665;5666 5666 2 RLEISPDSSPER SQKSVEERSLRHPLRRLEISPDSSPERAHY PLRRLEISPDSSPERAHYTHSDYQYSQRSQ R R L E R A 0 2 0 1 0 0 2 0 0 1 1 0 0 0 2 3 0 0 0 0 0 0 12 1 1384.6947 B8QGS9;Q99959 B8QGS9 147 158 PKP2 Plakophilin-2 yes no 2 6.2742E-05 89.231 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2141 549 2319 3488 5667 5667 806;807 0 RLGGLRPESPESLTSVSR ______________________________ GLRPESPESLTSVSRTRRALVEFESNPEET R R L S R T 0 3 0 0 0 0 2 2 0 0 3 0 0 0 2 4 1 0 0 1 0 0 18 2 1940.0439 Q9H6F5;H0YG79;Q6ZW18 Q9H6F5 10 27 CCDC86 Coiled-coil domain-containing protein 86 yes no 3 1.5255E-05 43.175 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2142 927 2320 3489 5668 5668 1619;1620 0 RLGSLVDEFK QAVDLTLPKVEAMNKRLGSLVDEFKELVYP EAMNKRLGSLVDEFKELVYPPDYNPEGKVT K R L F K E 0 1 0 1 0 0 1 1 0 0 2 1 0 1 0 1 0 0 0 1 0 0 10 1 1162.6346 B4DE32;B1AHC9;A0A024R1N4;P12956;B4E356;B2RDN9;Q6IC76 B4DE32 467 476 XRCC6;G22P1 X-ray repair cross-complementing protein 6 yes no 2 0.0022584 68.069 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2143 33 2321 3490 5669 5669 31 0 RLGTNQENQQPNQQPPGK YHTVLKLQGQVSAKKRLGTNQENQQPNQQP TNQENQQPNQQPPGKKPFLRNLLPRTPTCQ K R L G K K 0 1 3 0 0 5 1 2 0 0 1 1 0 0 3 0 1 0 0 0 0 0 18 1 2033.0039 O95235 O95235 829 846 KIF20A Kinesin-like protein KIF20A yes yes 3 0.00059435 31.111 1 0.58173 0.77959 NaN 1 Median NaN NaN NaN 0 0 Median 0.58173 0.77959 NaN 1 0 Median 10300000 7125100 3174700 0 0 0 10300000 7125100 3174700 2144 716 2322 3491 5670 5670 1 RLIATQPISASDSG KQGIANLSAEVVSLKRLIATQPISASDSG_ KRLIATQPISASDSG_______________ K R L S G - 2 1 0 1 0 1 0 1 0 2 1 0 0 0 1 3 1 0 0 0 0 0 14 1 1414.7416 D9IVD5;A0A024R241;Q16649 D9IVD5 449 462 NFIL3 Nuclear factor interleukin-3-regulated protein yes no 2 0.0011785 46.66 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2145 41 2323 3492 5671 5671 39 0 RLIPDGCGVK TKFNADEFEDMVAEKRLIPDGCGVKYIPSR MVAEKRLIPDGCGVKYIPSRGPLDKWRALH K R L V K Y 0 1 0 1 1 0 0 2 0 1 1 1 0 0 1 0 0 0 0 1 0 0 10 1 1113.5965 F8W7C6;A0A087WV22;X1WI28;X5D2T3;P27635;X5D7P1 F8W7C6 138 147 RPL10 60S ribosomal protein L10 yes no 2 0.0096176 58.699 1 1 0.69379 0.95458 6.3124 2 Median 0.78664 0.99815 NaN 1 0 Median 0.6119 0.91291 NaN 1 0 Median 30424000 17844000 12580000 6398400 3746900 2651500 24026000 14097000 9928800 2146 187 2324 3493;3494 5672;5673 5672 1 RLIVVLEGASLETVK PKRPRLGAGNKIGGRRLIVVLEGASLETVK RLIVVLEGASLETVKVGKTYELLNCDKHKS R R L V K V 1 1 0 0 0 0 2 1 0 1 3 1 0 0 0 1 1 0 0 3 0 0 15 1 1625.9716 B4DP65;V9GYP5;B4DQC7;A0A087WWQ2;A8K6D2;Q92979 B4DP65 42 56 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 yes no 3 0.0034131 26.292 1 0.73706 0.86666 NaN 1 Median NaN NaN NaN 0 0 Median 0.73706 0.86666 NaN 1 0 Median 1236500 635920 600540 0 0 0 1236500 635920 600540 2147 193 2325 3495 5674 5674 1 RLLAEK RDLEDSLARERDTSRRLLAEKEREMAEMRA LARERDTSRRLLAEKEREMAEMRARMQQQL R R L E K E 1 1 0 0 0 0 1 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 6 1 728.45447 P02545;W8QEH3;Q5I6Y5;Q8N519;Q3BDU5;Q5TCI8;B5MCA1;Q96G28 P02545 336 341 LMNA;CFAP36 Prelamin-A/C;Lamin-A/C;Cilia- and flagella-associated protein 36 yes no 2 0.027652 42.124 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2148 725 2326 3496 5675 5675 1 RLLGDSDSEEEQK SAREERSCKQKSQAKRLLGDSDSEEEQKEA AKRLLGDSDSEEEQKEAASSGDDSGRDREP K R L Q K E 0 1 0 2 0 1 3 1 0 0 2 1 0 0 0 2 0 0 0 0 0 0 13 1 1504.7005 B2R6A9;Q9BW71 B2R6A9 284 296 HIRIP3 HIRA-interacting protein 3 yes no 2 0.0012566 43.861 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2149 403 2327 3497 5676;5677 5676 598;599 0 RLNKHEENLK KPLDLRPKKTRAMRRRLNKHEENLKTKKQQ RAMRRRLNKHEENLKTKKQQRKERLYPLRK R R L L K T 0 1 2 0 0 0 2 0 1 0 2 2 0 0 0 0 0 0 0 0 0 0 10 2 1279.6997 P42766;A4D2M5 P42766 94 103 RPL35;LOC154880 60S ribosomal protein L35 no no 3 0.0015416 63.32 1 0.80332 0.9583 NaN 1 Median 0.80332 0.9583 NaN 1 0 Median NaN NaN NaN 0 0 Median 44221000 23154000 21067000 44221000 23154000 21067000 0 0 0 2150 760;314 2328 3498 5678;5679 5678 2 RLPDAHSDYAR LSFRRSPTKSSLDYRRLPDAHSDYARYSGS LDYRRLPDAHSDYARYSGSYNDYLRAAQMH R R L A R Y 2 2 0 2 0 0 0 0 1 0 1 0 0 0 1 1 0 0 1 0 0 0 11 1 1299.632 A0A0S2Z4Z0;Q96PK6;B4DNG4 A0A0S2Z4Z0 637 647 RBM14 RNA-binding protein 14 yes no 3 0.0076912 30.563 1 0.52719 0.66432 NaN 1 Median 0.52719 0.66432 NaN 1 0 Median NaN NaN NaN 0 0 Median 4178300 2644000 1534300 4178300 2644000 1534300 0 0 0 2151 267 2329 3499 5680 5680 1 RLQEIAQK MRRRAMSHNVKRLPRRLQEIAQKEAEKAVH NVKRLPRRLQEIAQKEAEKAVHQKKEHSKN R R L Q K E 1 1 0 0 0 2 1 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 8 1 984.57163 Q96F88;Q99575;E5RK39 Q96F88 154 161 POP1 Ribonucleases P/MRP protein subunit POP1 yes no 2 0.012285 60.59 1 0.32648 0.43458 NaN 1 Median NaN NaN NaN 0 0 Median 0.32648 0.43458 NaN 1 0 Median 9435700 6390200 3045500 0 0 0 9435700 6390200 3045500 2152 901 2330 3500 5681 5681 1 RLQTQVFK LDYILGLKIEDFLERRLQTQVFKLGLAKSI IEDFLERRLQTQVFKLGLAKSIHHARVLIR R R L F K L 0 1 0 0 0 2 0 0 0 0 1 1 0 1 0 0 1 0 0 1 0 0 8 1 1018.5924 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 A0A024R4M0 109 116 RPS9 40S ribosomal protein S9 yes no 2 1.727E-13 113.71 1 0.45136 0.70317 NaN 1 Median NaN NaN NaN 0 0 Median 0.45136 0.70317 NaN 1 0 Median 63771000 43435000 20336000 0 0 0 63771000 43435000 20336000 2153 62 2331 3501 5682;5683 5683 2 RLSEFIYSK STVSTPIFSTQEKMKRLSEFIYSKTSKAGV TQEKMKRLSEFIYSKTSKAGVQEFVDGLHE K R L S K T 0 1 0 0 0 0 1 0 0 1 1 1 0 1 0 2 0 0 1 0 0 0 9 1 1141.6132 Q9UK61;A0A024R363;A0A087X0F1 Q9UK61 1060 1068 FAM208A;C3orf63 Protein FAM208A yes no 2 0.011558 50.805 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2094100 2094100 0 0 0 0 2094100 2094100 0 2154 954 2332 3502 5684 5684 1 RLSPPSSSAASSYSFSDLNSTR RLYEKKIFEYETQRRRLSPPSSSAASSYSF SAASSYSFSDLNSTRGDADMYDLPKKEDAL R R L T R G 2 2 1 1 0 0 0 0 0 0 2 0 0 1 2 9 1 0 1 0 0 0 22 1 2316.0982 P50402 P50402 47 68 EMD Emerin yes yes 3 3.3968E-10 48.597 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2155 771 2333 3503 5685;5686;5687 5687 1253;1254 0 RLSPSASPPR KKPPKRTSSPPRKTRRLSPSASPPRRRHRP PRKTRRLSPSASPPRRRHRPSPPATPPPKT R R L P R R 1 2 0 0 0 0 0 0 0 0 1 0 0 0 3 3 0 0 0 0 0 0 10 1 1066.5883 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3;M0R088;E9PCT1 A0A0S2Z4W1 387 396 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.0026451 42.843 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2156 266 2334 3504 5688 5688 362;363;364 0 RLSSASTGKPPLSVEDDFEK EVSGPSSSQMSMKTRRLSSASTGKPPLSVE STGKPPLSVEDDFEKLIWEISGGKLEAEID R R L E K L 1 1 0 2 0 0 2 1 0 0 2 2 0 1 2 4 1 0 0 1 0 0 20 2 2162.0855 B4DLG2;O75152;B4DYM8;A0A1B0GTU1;A0A024R8H9;A0A1B0GUI2 B4DLG2 702 721 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 3 8.9362E-10 50.986 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2157 479 2335 3505 5689 5689 694;695 0 RLSSLR KEAKEKRQEQIAKRRRLSSLRASTSKSESS RQEQIAKRRRLSSLRASTSKSESSQK____ R R L L R A 0 2 0 0 0 0 0 0 0 0 2 0 0 0 0 2 0 0 0 0 0 0 6 1 730.44497 Q96DV6;A2A3R6;P62753;A2A3R5;B3KVC6;B7ZA36;B4DG64;B3KN75;A0A024RD62;Q9Y253 Q96DV6 233 238 RPS6;POLH 40S ribosomal protein S6;DNA polymerase eta yes no 2 0.016418 52.591 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2158 303 2336 3506 5690 5690 450;451 0 RLSSLRASTSK KEAKEKRQEQIAKRRRLSSLRASTSKSESS AKRRRLSSLRASTSKSESSQK_________ R R L S K S 1 2 0 0 0 0 0 0 0 0 2 1 0 0 0 4 1 0 0 0 0 0 11 2 1204.6888 Q96DV6;A2A3R6;P62753;A2A3R5 Q96DV6 233 243 RPS6 40S ribosomal protein S6 yes no 2;3 1.5257E-65 144.16 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2159 303 2337;2338 3507;3508;3509 5691;5692;5693 5692 450;451;452 0 RLSTIDESGSILSDISFDK FLNRGQPSSSNAGNKRLSTIDESGSILSDI IDESGSILSDISFDKTDESLDWDSSLVKTF K R L D K T 0 1 0 3 0 0 1 1 0 3 2 1 0 1 0 5 1 0 0 0 0 0 19 1 2082.0481 B2RE34;A0A024R136;Q9H0H5;F8VRD2;F8VQZ5;F8W1T4;F8VV37;F8W1E5;F8VWY4;F8VVE5 B2RE34 142 160 RACGAP1 Rac GTPase-activating protein 1 yes no 3 5.8154E-06 43.841 1 0.87736 1.2318 NaN 1 Median NaN NaN NaN 0 0 Median 0.87736 1.2318 NaN 1 0 Median 14934000 7273700 7660200 0 0 0 14934000 7273700 7660200 2160 25 2339 3510 5694 5694 1 RLSVERIYQK NMQVNKIKKNEDAKKRLSVERIYQKKTQLE EDAKKRLSVERIYQKKTQLEHILLRPDTYI K R L Q K K 0 2 0 0 0 1 1 0 0 1 1 1 0 0 0 1 0 0 1 1 0 0 10 2 1290.7408 P11388;J3KTB7 P11388 27 36 TOP2A DNA topoisomerase 2-alpha yes no 3 0.0028875 45.28 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2161 734 2340 3511 5695 5695 1145 0 RLSYNTASNK ______________________________ LTYRRRLSYNTASNKTRLSRTPGNRIVYLY R R L N K T 1 1 2 0 0 0 0 0 0 0 1 1 0 0 0 2 1 0 1 0 0 0 10 1 1152.5887 A0A024RDH8;P49207 A0A024RDH8 10 19 RPL34 60S ribosomal protein L34 yes no 2 0.0067387 72.325 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 21142000 21142000 0 0 0 0 21142000 21142000 0 2162 169 2341 3512 5696 5696 1 RLVIQDK FRRRREGKTDYYARKRLVIQDKNKYNTPKY KTDYYARKRLVIQDKNKYNTPKYRMIVRVT K R L D K N 0 1 0 1 0 1 0 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 7 1 870.5287 A2RUM7;Q59GX9;P46777;Q9BUV4;R4GNJ2 A2RUM7 35 41 RPL5 60S ribosomal protein L5 yes no 2 0.021787 78.149 1 0.62366 0.98832 NaN 1 Median NaN NaN NaN 0 0 Median 0.62366 0.98832 NaN 1 0 Median 133500000 79035000 54466000 0 0 0 133500000 79035000 54466000 2163 306 2342 3513 5697;5698 5698 2 RLVTIK ______________________________ ______________________________ R R L I K R 0 1 0 0 0 0 0 0 0 1 1 1 0 0 0 0 1 0 0 1 0 0 6 1 728.49086 P46013;Q70L72;Q70L73 P46013 6 11 MKI67 Antigen KI-67 no no 2 0.017193 82.913 1 0.84215 1.1806 NaN 1 Median NaN NaN NaN 0 0 Median 0.84215 1.1806 NaN 1 0 Median 14786000 8140400 6646000 0 0 0 14786000 8140400 6646000 2164 762;865 2343 3514 5699 5699 1 RLVTTGVLK KVGENADSQIKLSIKRLVTTGVLKQTKGVG IKLSIKRLVTTGVLKQTKGVGASGSFRLAK K R L L K Q 0 1 0 0 0 0 0 1 0 0 2 1 0 0 0 0 2 0 0 2 0 0 9 1 985.62842 P07305 P07305 74 82 H1F0 Histone H1.0;Histone H1.0, N-terminally processed yes yes 2 0.02454 50.607 1 0.47005 0.68721 NaN 1 Median NaN NaN NaN 0 0 Median 0.47005 0.68721 NaN 1 0 Median 19664000 13788000 5876300 0 0 0 19664000 13788000 5876300 2165 729 2344 3515 5700 5700 1 RMANSLFPAQMSVNTR NLRKVFLERDLVSLRRMANSLFPAQMSVNT MANSLFPAQMSVNTRRLVLKRNTLSIGAMR R R M T R R 2 2 2 0 0 1 0 0 0 0 1 0 2 1 1 2 1 0 0 1 0 0 16 1 1821.8978 L8EAH8 L8EAH8 71 86 PEG3 yes yes 3 0.0080672 16.88 1 0.55036 0.71495 NaN 1 Median 0.55036 0.71495 NaN 1 0 Median NaN NaN NaN 0 0 Median 22253000 13311000 8941800 22253000 13311000 8941800 0 0 0 2166 690 2345 3516 5701 5701 1 RMATEVAADALGEEWK IEVDDERKLRTFYEKRMATEVAADALGEEW MATEVAADALGEEWKGYVVRISGGNDKQGF K R M W K G 4 1 0 1 0 0 3 1 0 0 1 1 1 0 0 0 1 1 0 1 0 0 16 1 1775.8512 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 31 46 RPS6 40S ribosomal protein S6 yes no 3 1.1595E-07 86.488 1 0.39695 0.61656 NaN 1 Median NaN NaN NaN 0 0 Median 0.39695 0.61656 NaN 1 0 Median 55960000 38802000 17159000 0 0 0 55960000 38802000 17159000 2167 303 2346 3517 5702;5703 5703 63 2 RMGESDDSILR FNGQFKTYAICGAIRRMGESDDSILRLAKA GAIRRMGESDDSILRLAKADGIVSK_____ R R M L R L 0 2 0 2 0 0 1 1 0 1 1 0 1 0 0 2 0 0 0 0 0 0 11 1 1277.6034 Q8WVC2;Q6FGH5;P63220 Q8WVC2 61 71 RPS21 40S ribosomal protein S21 yes no 3 0.0019581 51.463 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 5367600 0 5367600 0 0 0 5367600 0 5367600 2168 793 2347 3518 5704 5704 183 1 RNDHDDDEDEEVISK TDVMVRCLKLLKEFKRNDHDDDEDEEVISK RNDHDDDEDEEVISKTVPPVDIVFERDMLT K R N S K T 0 1 1 5 0 0 3 0 1 1 0 1 0 0 0 1 0 0 0 1 0 0 15 1 1814.7555 Q6AHZ7;Q6AWA4;Q12789 Q6AHZ7 341 355 DKFZp686A111;DKFZp686O0870;GTF3C1 General transcription factor 3C polypeptide 1 yes no 3 2.0008E-05 61.815 1 0.54366 0.69866 NaN 1 Median 0.54366 0.69866 NaN 1 0 Median NaN NaN NaN 0 0 Median 8492700 5264800 3228000 8492700 5264800 3228000 0 0 0 2169 805 2348 3519 5705;5706 5706 2 RNEALPVTLGFQTPES DELLEVEETKCFIFRRNEALPVTLGFQTPE NEALPVTLGFQTPES_______________ R R N E S - 1 1 1 0 0 1 2 1 0 0 2 0 0 1 2 1 2 0 0 1 0 0 16 1 1757.8948 A0A024R512;Q8IYA6 A0A024R512 235 250 FLJ40629;CKAP2L Cytoskeleton-associated protein 2-like yes no 2 8.7562E-05 53.328 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2170 66 2349;2350 3520;3521 5707;5708 5708 76;1786 0 RNEEEESTSQIERPLSQEPAKK PVYVPVPKQTIKKTKRNEEEESTSQIERPL TSQIERPLSQEPAKKVKAKKKHTNAEKKLA K R N K K V 1 2 1 0 0 2 6 0 0 1 1 2 0 0 2 3 1 0 0 0 0 0 22 3 2584.2729 Q5TCT4;A2A2V2;P42696 Q5TCT4 84 105 RBM34 RNA-binding protein 34 yes no 4 2.424E-08 46.578 1 1.1634 1.5698 NaN 1 Median 1.1634 1.5698 NaN 1 0 Median NaN NaN NaN 0 0 Median 10716000 4793900 5922000 10716000 4793900 5922000 0 0 0 2171 302 2351 3522 5709;5710 5710 2 RNEIDAEPPAK RKRRGGFAVQAKKPKRNEIDAEPPAKRHAT KKPKRNEIDAEPPAKRHATAEEVEEEERDR K R N A K R 2 1 1 1 0 0 2 0 0 1 0 1 0 0 2 0 0 0 0 0 0 0 11 1 1238.6255 Q8TDN6;Q9NUW4;B4E0B8;A0JLQ5 Q8TDN6 21 31 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog yes no 2;3 0.0057569 56.916 1 1 0.9346 1.2002 9.3171 2 Median 1.0122 1.282 NaN 1 0 Median 0.86292 1.1237 NaN 1 0 Median 12940000 7129400 5810200 5981700 3434500 2547200 6958000 3694900 3263000 2172 890 2352 3523;3524 5711;5712 5712 1 RNEIDAEPPAKR RKRRGGFAVQAKKPKRNEIDAEPPAKRHAT KPKRNEIDAEPPAKRHATAEEVEEEERDRI K R N K R H 2 2 1 1 0 0 2 0 0 1 0 1 0 0 2 0 0 0 0 0 0 0 12 2 1394.7266 Q8TDN6;Q9NUW4;B4E0B8;A0JLQ5 Q8TDN6 21 32 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog yes no 3 0.0082627 33.204 1 1 0.55435 0.70304 42.796 2 Median 0.80051 0.95149 NaN 1 0 Median 0.38389 0.51947 NaN 1 0 Median 26623000 18803000 7820200 3346500 1931200 1415300 23276000 16872000 6404900 2173 890 2353 3525;3526 5713;5714 5714 2 RNENQLIIFADDTYPR IVSDVQESFIWVRYKRNENQLIIFADDTYP NENQLIIFADDTYPRWVTTASLLDYDTVAG K R N P R W 1 2 2 2 0 1 1 0 0 2 1 0 0 1 1 0 1 0 1 0 0 0 16 1 1963.9752 B3KM77;B3KQH1;A8K6V3;Q15393 B3KM77 302 317 SF3B3 Splicing factor 3B subunit 3 yes no 3 0.0079247 29.687 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1639000 1639000 0 0 0 0 1639000 1639000 0 2174 365 2354 3527 5715 5715 1 RNISKLSPPR LATPRLHITIPRRSKRNISKLSPPRIFQTV PRRSKRNISKLSPPRIFQTVTNGLKKNQVV K R N P R I 0 2 1 0 0 0 0 0 0 1 1 1 0 0 2 2 0 0 0 0 0 0 10 2 1166.6884 Q6P0N0;G5E9K5;H7C1S6 Q6P0N0 359 368 MIS18BP1 Mis18-binding protein 1 yes no 3 0.0040649 43.382 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2175 858 2355 3528 5716 5716 1423 0 RNPDTQWITK FFEVILIDPFHKAIRRNPDTQWITKPVHKH HKAIRRNPDTQWITKPVHKHREMRGLTSAG R R N T K P 0 1 1 1 0 1 0 0 0 1 0 1 0 0 1 0 2 1 0 0 0 0 10 1 1257.6466 A0A024R2Q4;P61313;E7EQV9;E7ENU7 A0A024R2Q4 144 153 RPL15 Ribosomal protein L15;60S ribosomal protein L15 yes no 2 0.026696 39.918 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 36625000 0 36625000 0 0 0 36625000 0 36625000 2176 50 2356 3529 5717 5717 1 RNQKPEVR QRAITGASLADIMAKRNQKPEVRKAQREQA LADIMAKRNQKPEVRKAQREQAIRHLQRQH K R N V R K 0 2 1 0 0 1 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 8 2 1025.573 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 94 101 RPL24;HEL-S-310 60S ribosomal protein L24 yes no 3 0.0018034 64.265 2 0.44979 0.64995 5.3251 2 Median NaN NaN NaN 0 0 Median 0.44979 0.64995 5.3251 2 0 Median 239420000 157840000 81583000 0 0 0 239420000 157840000 81583000 2177 563 2357 3530;3531 5718;5719;5720 5720 3 RNQSFCPTVNLDK PGYFGKVGMKHYHLKRNQSFCPTVNLDKLW LKRNQSFCPTVNLDKLWTLVSEQTRVNAAK K R N D K L 0 1 2 1 1 1 0 0 0 0 1 1 0 1 1 1 1 0 0 1 0 0 13 1 1577.762 Q9BQQ5;E9PLL6;Q6NZ52;P46776;E9PJD9 Q9BQQ5 65 77 L27a;RPL27A 60S ribosomal protein L27a yes no 3 0.018793 25.978 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3544500 3544500 0 0 0 0 3544500 3544500 0 2178 626 2358 3532;3533 5721;5722 5722 2 RNSVDTATSSSLSTPSEPLSPTSSLGEERN WPRRASCTSSTSGSKRNSVDTATSSSLSTP SEPLSPTSSLGEERN_______________ K R N R N - 1 2 2 1 0 0 3 1 0 0 3 0 0 0 3 9 4 0 0 1 0 0 30 2 3105.4698 B7Z806;B7Z6I6;Q53ER0;A8K6K7;P13807;B7Z255 B7Z806 628 657 GYS1 Glycogen [starch] synthase, muscle yes no 3 3.3718E-25 65.737 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2179 364 2359 3534 5723 5723 563;564 0 RNSVERPAEPVAGAATPSLVEQQK VTVDDLPNRMCADVRRNSVERPAEPVAGAA PVAGAATPSLVEQQKMLEELNKQIEEQKRQ R R N Q K M 4 2 1 0 0 2 3 1 0 0 1 1 0 0 3 2 1 0 0 3 0 0 24 2 2533.3249 Q9BTC0 Q9BTC0 1454 1477 DIDO1 Death-inducer obliterator 1 yes yes 3;4 1.8623E-135 163.75 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2180 916 2360 3535;3536;3537;3538 5724;5725;5726;5727;5728 5726 1581 0 RNTLQLHR FHHTIGGSRRAAWRRRNTLQLHRYR_____ RRAAWRRRNTLQLHRYR_____________ R R N H R Y 0 2 1 0 0 1 0 0 1 0 2 0 0 0 0 0 1 0 0 0 0 0 8 1 1036.589 A0A024R2Q4;P61313;B4DLP4 A0A024R2Q4 195 202 RPL15 Ribosomal protein L15;60S ribosomal protein L15 yes no 3 0.018492 26.789 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2181 50 2361 3539 5729 5729 1 RPAEDMEEEQAFK EETFPNTETNGEFGKRPAEDMEEEQAFKRS GKRPAEDMEEEQAFKRSRNTDEMVELRILL K R P F K R 2 1 0 1 0 1 4 0 0 0 0 1 1 1 1 0 0 0 0 0 0 0 13 1 1578.6984 Q5T6W2;B4DUQ1;B4DFF1;A0A024R228;Q5EC54;P61978;S4R457 Q5T6W2 22 34 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K yes no 3 5.9575E-10 78.157 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 6817300 0 6817300 0 0 0 6817300 0 6817300 2182 39 2362 3540 5730 5730 6 1 RPASPSSPEHLPATPAESPAQR IMEDLRTLNKLKSPKRPASPSSPEHLPATP PEHLPATPAESPAQRFEARIEDGKLYYDKR K R P Q R F 4 2 0 0 0 1 2 0 1 0 1 0 0 0 6 4 1 0 0 0 0 0 22 1 2282.1404 Q52LB7;Q2M2F3;Q9H7L9 Q52LB7 72 93 SUDS3 Sin3 histone deacetylase corepressor complex component SDS3 yes no 3 2.7445E-07 44.264 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2183 830 2363 3541 5731 5731 1370;1371 0 RPDDVPLSLSPSK AGAAHKPRARLAALKRPDDVPLSLSPSKRA LKRPDDVPLSLSPSKRACASPSAQVEGSPV K R P S K R 0 1 0 2 0 0 0 0 0 0 2 1 0 0 3 3 0 0 0 1 0 0 13 1 1409.7514 F8WDB4;A0A140VJD0;Q9UFC0 F8WDB4 82 94 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 yes no 2 4.9431E-42 128.9 1 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2184 278 2364 3542;3543;3544 5732;5733;5734;5735;5736 5733 394 0 RPDDVPLSLSPSKR AGAAHKPRARLAALKRPDDVPLSLSPSKRA KRPDDVPLSLSPSKRACASPSAQVEGSPVA K R P K R A 0 2 0 2 0 0 0 0 0 0 2 1 0 0 3 3 0 0 0 1 0 0 14 2 1565.8526 F8WDB4;A0A140VJD0;Q9UFC0 F8WDB4 82 95 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 yes no 3 0.00083893 47.754 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2185 278 2365 3545 5737 5737 394 0 RPESPSEISPIK EIKETNDTWNSQFGKRPESPSEISPIKGSV FGKRPESPSEISPIKGSVRTGLFEWDNDFE K R P I K G 0 1 0 0 0 0 2 0 0 2 0 1 0 0 3 3 0 0 0 0 0 0 12 1 1338.7143 A8K273;B2RTX8;Q7Z5K2 A8K273 218 229 WAPAL Wings apart-like protein homolog yes no 2 3.3995E-05 70.622 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2186 345 2366 3546 5738 5738 522;523 0 RPFDPNDRCYECGEK TGMPRRSRFDRPPARRPFDPNDRCYECGEK RPFDPNDRCYECGEKGHYAYDCHRYSRRRR R R P E K G 0 2 1 2 2 0 2 1 0 0 0 1 0 1 2 0 0 0 1 0 0 0 15 2 1941.8098 Q16629;F8WEA1;Q8NB80;A0A0B4J1Z1;B4DEK2;C9JAB2 Q16629 98 112 SRSF7 Serine/arginine-rich splicing factor 7 yes no 3 0.001498 36.029 1 0.51282 0.62294 NaN 1 Median 0.51282 0.62294 NaN 1 0 Median NaN NaN NaN 0 0 Median 6902500 4513900 2388600 6902500 4513900 2388600 0 0 0 2187 828 2367 3547 5739 5739 1 RPNKPAELIAK FVNLMKESFETFINKRPNKPAELIAKHVDS FINKRPNKPAELIAKHVDSKLRAGNKEATD K R P A K H 2 1 1 0 0 0 1 0 0 1 1 2 0 0 2 0 0 0 0 0 0 0 11 2 1235.735 B4DKT2;B2RBV7;A0A0A0MR50;K4DI93;Q13619;Q13620 B4DKT2 80 90 CUL4A;CUL4B Cullin-4A;Cullin-4B yes no 3 0.0020856 56.551 1 0.41402 0.58651 NaN 1 Median NaN NaN NaN 0 0 Median 0.41402 0.58651 NaN 1 0 Median 15244000 9896100 5348400 0 0 0 15244000 9896100 5348400 2188 212 2368 3548 5740;5741 5740 2 RPNTAQRGSPGGPEFLK PPDLGGLEALRQREKRPNTAQRGSPGGPEF NTAQRGSPGGPEFLKTPLGGSFLVYESFLY K R P L K T 1 2 1 0 0 1 1 3 0 0 1 1 0 1 3 1 1 0 0 0 0 0 17 2 1810.9438 Q4VC44;B3KRZ0;I3L188 Q4VC44 495 511 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 yes no 3 1.2796E-05 47.392 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2189 833 2369 3549 5742;5743 5742 1379 0 RPPPEHFR PPEDDFRHPREEDWRRPPPEHFRRPPPEHF PREEDWRRPPPEHFRRPPPEHFRRPPPEHF R R P F R R 0 2 0 0 0 0 1 0 1 0 0 0 0 1 3 0 0 0 0 0 0 0 8 1 1034.541 B9ZVT1;Q8IXT5 B9ZVT1 621 628 RBM12B RNA-binding protein 12B yes no 3 0.0022056 52.716 1 0.4783 0.60969 NaN 1 Median 0.4783 0.60969 NaN 1 0 Median NaN NaN NaN 0 0 Median 5821400 3608200 2213200 5821400 3608200 2213200 0 0 0 2190 556 2370 3550 5744;5745 5745 2 RPPSPDVIVLSDNEQPSSPR PVDMRTSHSDMKSERRPPSPDVIVLSDNEQ DVIVLSDNEQPSSPRVNGLTTVALKETSTE R R P P R V 0 2 1 2 0 1 1 0 0 1 1 0 0 0 5 4 0 0 0 2 0 0 20 1 2189.1077 A0A024R7K7;A0A024R7M6;Q86YP4;C9JMI3;C9JGN4;C9JHD7;C9JJK9 A0A024R7K7 97 116 GATAD2A Transcriptional repressor p66-alpha yes no 3 2.1248E-30 109.46 3 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2191 93 2371;2372 3551;3552;3553;3554 5746;5747;5748;5749;5750;5751 5747 131;132;133 0 RPPTPCSDPERK AASREDKLDLTKKGKRPPTPCSDPERKRFR KGKRPPTPCSDPERKRFRFNSESESGSEAS K R P R K R 0 2 0 1 1 0 1 0 0 0 0 1 0 0 4 1 1 0 0 0 0 0 12 2 1438.6987 B2R6A9;Q9BW71 B2R6A9 81 92 HIRIP3 HIRA-interacting protein 3 yes no 2 0.012459 47.915 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2192 403 2373 3555 5752 5752 600;1864 0 RPPVLR RAEKKAAGKGDVPTKRPPVLRAGVNTVTTL AGKGDVPTKRPPVLRAGVNTVTTLVENKKA K R P L R A 0 2 0 0 0 0 0 0 0 0 1 0 0 0 2 0 0 0 0 1 0 0 6 1 736.47079 P62424;Q9BY74;Q5T8U2;Q5T8U3 P62424 132 137 RPL7A;RP-L7a 60S ribosomal protein L7a yes no 2 0.010131 49.312 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2193 789 2374 3556 5753 5753 1 RPQGESYDQAIR IGKLIICNVTGIAHRRPQGESYDQAIRNDE AHRRPQGESYDQAIRNDETGLWQCPFCQQD R R P I R N 1 2 0 1 0 2 1 1 0 1 0 0 0 0 1 1 0 0 1 0 0 0 12 1 1418.6902 Q7KZ85 Q7KZ85 1178 1189 SUPT6H Transcription elongation factor SPT6 yes yes 3 0.026672 23.931 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 4352300 0 4352300 0 0 0 4352300 0 4352300 2194 866 2375 3557 5754 5754 1 RPRDEDDADYKPK DGYFVPPKEDIKPLKRPRDEDDADYKPKKI LKRPRDEDDADYKPKKIKTEDTKKEKKRKL K R P P K K 1 2 0 4 0 0 1 0 0 0 0 2 0 0 2 0 0 0 1 0 0 0 13 3 1603.759 P11387;B9EG90;Q6PK95;Q6NWZ5 P11387 138 150 TOP1 DNA topoisomerase 1 yes no 3;4 6.331E-07 93.011 2 0.5971 0.80572 19.593 2 Median 0.5971 0.80572 19.593 2 0 Median NaN NaN NaN 0 0 Median 238220000 142390000 95834000 238220000 142390000 95834000 0 0 0 2195 733 2376 3558;3559 5755;5756;5757;5758;5759 5756 5 RPSCGQLSSHPGPLPGCQDSDEVR GHASNKEKEMITRDRRPSCGQLSSHPGPLP HPGPLPGCQDSDEVRP______________ R R P V R P 0 2 0 2 2 2 1 3 1 0 2 0 0 0 4 4 0 0 0 1 0 0 24 1 2635.1867 M0R014 M0R014 862 885 RYR1 yes yes 3 0.00037122 26.627 1 0.79761 1.0419 NaN 1 Median 0.79761 1.0419 NaN 1 0 Median NaN NaN NaN 0 0 Median 41566000 23681000 17885000 41566000 23681000 17885000 0 0 0 2196 692 2377 3560 5760 5760 1 RPTDYFAEMAK LAVLPRLHQLKVPTKRPTDYFAEMAKSDLQ VPTKRPTDYFAEMAKSDLQMQKIRQKLQTK K R P A K S 2 1 0 1 0 0 1 0 0 0 0 1 1 1 1 0 1 0 1 0 0 0 11 1 1327.6231 Q6IB29;H7C2Q8;Q99848 Q6IB29 132 142 EBNA1BP2 Probable rRNA-processing protein EBP2 yes no 2;3 0.0014273 50.108 2 0.60061 0.93713 4.9374 2 Median NaN NaN NaN 0 0 Median 0.60061 0.93713 4.9374 2 0 Median 255460000 157090000 98375000 0 0 0 255460000 157090000 98375000 2197 674 2378 3561;3562 5761;5762 5761 144 2 RPTETNPVTSNSDEECNETVK SDLRRSPRVKTTPLRRPTETNPVTSNSDEE PVTSNSDEECNETVKEKQKLSVPVRKKDKR R R P V K E 0 1 3 1 1 0 4 0 0 0 0 1 0 0 2 2 4 0 0 2 0 0 21 1 2406.0605 A4LAA3;P46100;A0A096LNL9;A0A096LNW1 A4LAA3 666 686 ATRX Transcriptional regulator ATRX yes no 3 2.8316E-48 122.78 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2198 317 2379;2380 3563;3564;3565 5763;5764;5765;5766;5767 5763 475;476 0 RPVLPR VPDEEGWVKVTRRGRRPVLPRTEAASLRVL WVKVTRRGRRPVLPRTEAASLRVLERERRK R R P P R T 0 2 0 0 0 0 0 0 0 0 1 0 0 0 2 0 0 0 0 1 0 0 6 1 736.47079 Q9NSQ0;Q9Y3A4 REV__Q59FD0 36 41 RRP7BP;RRP7A Putative ribosomal RNA-processing protein 7 homolog B;Ribosomal RNA-processing protein 7 homolog A yes no 2 0.0087694 87.627 1 0.70582 1.1444 NaN 1 Median NaN NaN NaN 0 0 Median 0.70582 1.1444 NaN 1 0 Median 16195000 9177700 7017400 0 0 0 16195000 9177700 7017400 2199 939 2381 3566 5768 5768 1 RPYAPINANAIK RRMCRDLLQPRRAARRPYAPINANAIKAEC AARRPYAPINANAIKAECSIRLPKAAKTPL R R P I K A 3 1 2 0 0 0 0 0 0 2 0 1 0 0 2 0 0 0 1 0 0 0 12 1 1326.7408 A0A024R534;O94776 A0A024R534 481 492 MTA2 Metastasis-associated protein MTA2 yes no 3 0.0053491 30.795 1 0.78163 0.99209 NaN 1 Median NaN NaN NaN 0 0 Median 0.78163 0.99209 NaN 1 0 Median 5356500 2782400 2574100 0 0 0 5356500 2782400 2574100 2200 67 2382 3567 5769 5769 1 RQAEQLSAAGEGGDAGRMDTEEARPAK GFTQVTRKGGRRAKKRQAEQLSAAGEGGDA GDAGRMDTEEARPAKRPVFPPLCGDGLLSG K R Q A K R 6 3 0 2 0 2 4 4 0 0 1 1 1 0 1 1 1 0 0 0 0 0 27 3 2800.3158 F8WBJ6;Q9NRX1 F8WBJ6 30 56 PNO1 RNA-binding protein PNO1 yes no 4 3.8998E-05 41.69 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2542400 2542400 0 0 0 0 2542400 2542400 0 2201 639 2383 3568 5770 5770 136 1 RQAQQERDELADEIANSSGK MIQLQEELAAAERAKRQAQQERDELADEIA ERDELADEIANSSGKGALALEEKRRLEARI K R Q G K G 3 2 1 2 0 3 3 1 0 1 1 1 0 0 0 2 0 0 0 0 0 0 20 2 2244.0731 A0A024R1N1;A0A0U4BW16;P35579;Q6ZNL4 A0A024R1N1 1697 1716 MYH9;FLJ00279 Myosin-9 yes no 3;4 1.3539E-07 46.663 1 1 1.6547 2.0885 114.15 2 Median 0.76262 0.93171 NaN 1 0 Median 3.5905 4.6814 NaN 1 0 Median 17348000 6122800 11225000 8094900 3914300 4180600 9253200 2208500 7044800 2202 32 2384 3569;3570 5771;5772;5773;5774 5771 4 RQDPQVVSPFSR NKSSRRVDQEKCTVRRQDPQVVSPFSRGKQ TVRRQDPQVVSPFSRGKQNHVLKNVETHTG R R Q S R G 0 2 0 1 0 2 0 0 0 0 0 0 0 1 2 2 0 0 0 2 0 0 12 1 1414.7317 A0JLR2;Q12986 A0JLR2 203 214 NFX1 Transcriptional repressor NF-X1 yes no 2 0.0017807 57.802 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2203 294 2385 3571 5775 5775 440 0 RQDSDLVQCGVTSPSSAEATGK AGKFPAGHSVIQLARRQDSDLVQCGVTSPS QCGVTSPSSAEATGKLAVDTFPARVIKHRA R R Q G K L 2 1 0 2 1 2 1 2 0 0 1 1 0 0 1 4 2 0 0 2 0 0 22 1 2292.0652 Q9HC52 Q9HC52 253 274 CBX8 Chromobox protein homolog 8 yes yes 2;3 2.7917E-17 85 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2204 930 2386 3572;3573;3574 5776;5777;5778;5779;5780;5781;5782 5779 1629;2041 0 RQLEEAEEEAQR KDQADKASTRLKQLKRQLEEAEEEAQRANA QLKRQLEEAEEEAQRANASRRKLQRELEDA K R Q Q R A 2 2 0 0 0 2 5 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 12 1 1486.7012 A0A024R1N1;A0A0U4BW16;P35579;Q6ZNL4 A0A024R1N1 1877 1888 MYH9;FLJ00279 Myosin-9 yes no 3 0.0082267 31.881 3 1.0579 1.3513 49.271 2 Median 1.0579 1.3513 49.271 2 0 Median NaN NaN NaN 0 0 Median 13228000 6177200 7050800 13228000 6177200 7050800 0 0 0 2205 32 2387 3575;3576;3577 5783;5784;5785 5785 1 RQLEEQEEALR QKMLEELNKQIEEQKRQLEEQEEALRQQRA EEQKRQLEEQEEALRQQRAAVGVSMAHFSV K R Q L R Q 1 2 0 0 0 2 4 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 11 1 1399.7056 Q9BTC0 Q9BTC0 1491 1501 DIDO1 Death-inducer obliterator 1 yes yes 3 0.00070104 64.55 1 0.72704 1.037 NaN 1 Median NaN NaN NaN 0 0 Median 0.72704 1.037 NaN 1 0 Median 7967000 4361400 3605600 0 0 0 7967000 4361400 3605600 2206 916 2388 3578 5786 5786 1 RQNGDDPLLTYR NKSNEDQSMGNWQIKRQNGDDPLLTYRFPP QIKRQNGDDPLLTYRFPPKFTLKAGQVVTI K R Q Y R F 0 2 1 2 0 1 0 1 0 0 2 0 0 0 1 0 1 0 1 0 0 0 12 1 1446.7215 P02545;W8QEH3;Q5TCI8;A0A0C4DGC5;B4DFR3 P02545 471 482 LMNA Prelamin-A/C;Lamin-A/C yes no 3 0.0022338 41.092 1 2.0239 2.9645 NaN 1 Median NaN NaN NaN 0 0 Median 2.0239 2.9645 NaN 1 0 Median 9104100 3574400 5529700 0 0 0 9104100 3574400 5529700 2207 725 2389 3579 5787;5788 5788 2 RQPAPPR KKKEAKEKGTWVQLKRQPAPPREAHFVRTN KGTWVQLKRQPAPPREAHFVRTNGKEPELL K R Q P R E 1 2 0 0 0 1 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 7 1 820.46677 Q6IAX2;P46778;Q59GK9 Q6IAX2 130 136 RPL21 60S ribosomal protein L21 yes no 2 0.011324 52.683 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 7241200 0 7241200 0 0 0 7241200 0 7241200 2208 764 2390 3580 5789 5789 1 RQPQEEVVHEDQGK KSSDREGTRAGEEERRQPQEEVVHEDQGKK RRQPQEEVVHEDQGKKPQDQLVIERERKWE R R Q G K K 0 1 0 1 0 3 3 1 1 0 0 1 0 0 1 0 0 0 0 2 0 0 14 1 1677.8071 E9PMS6;B7Z8W3;A0A1P7ZIM8;A0A0A0MTE2;E9PMT2;F8WD26;F8J2B5;J3KP06;Q8WWI1;E9PMP7;H0Y424;H0YDQ3 E9PMS6 915 928 LMO7 LIM domain only protein 7 yes no 3 0.00032699 56.482 1 0.65731 0.84532 NaN 1 Median 0.65731 0.84532 NaN 1 0 Median NaN NaN NaN 0 0 Median 8838900 5620200 3218600 8838900 5620200 3218600 0 0 0 2209 227 2391 3581 5790;5791 5790 2 RQQQEEEDLNLEDRGEETVLGGGTR VESRAYADPCSRRKKRQQQEEEDLNLEDRG LEDRGEETVLGGGTREAESRACSDGRSRKS K R Q T R E 0 3 1 2 0 3 6 4 0 0 3 0 0 0 0 0 2 0 0 1 0 0 25 2 2857.3438 A8KAG1;Q5T3I0 A8KAG1 339 363 GPATCH4 G patch domain-containing protein 4 yes no 4 0.018115 11.632 1 0.69743 0.90729 NaN 1 Median 0.69743 0.90729 NaN 1 0 Median NaN NaN NaN 0 0 Median 5475000 2471600 3003400 5475000 2471600 3003400 0 0 0 2210 383 2392 3582 5792 5792 1 RQSLELQK AEVDELVLQTKRSSRRQSLELQKCEEILHK QTKRSSRRQSLELQKCEEILHKIVKYRFSW R R Q Q K C 0 1 0 0 0 2 1 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 8 1 1000.5665 Q9UIG0 Q9UIG0 1340 1347 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 2 7.3307E-28 121.61 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2211 952 2393 3583;3584 5793;5794;5795;5796;5797 5795 1704 0 RQSPEPSPVTLGR KLSLQESESKRRCRKRQSPEPSPVTLGRRS RKRQSPEPSPVTLGRRSSGRQGGVHELSAF K R Q G R R 0 2 0 0 0 1 1 1 0 0 1 0 0 0 3 2 1 0 0 1 0 0 13 1 1422.7579 D3DS96;Q9NRL2;B3KND8;Q59G54 D3DS96 1410 1422 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes no 2;3 4.344E-23 118.33 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2212 591 2394;2395 3585;3586;3587 5798;5799;5800;5801;5802;5803;5804 5801 877;878 0 RQVLEGEEIAYK NNSDKDQSLGNWRIKRQVLEGEEIAYKFTP RIKRQVLEGEEIAYKFTPKYILRAGQMVTV K R Q Y K F 1 1 0 0 0 1 3 1 0 1 1 1 0 0 0 0 0 0 1 1 0 0 12 1 1433.7514 A0A0A7M1X5;Q03252 A0A0A7M1X5 368 379 LMNB2 Lamin-B2 yes no 2 0.024976 33.89 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 4208000 0 4208000 0 0 0 4208000 0 4208000 2213 233 2396 3588 5805 5805 1 RREEGPPPPSPDGASSDAEPEPPSGR ______________________________ DGASSDAEPEPPSGRTESPATAAETASEEL R R R G R T 2 3 0 2 0 0 4 3 0 0 0 0 0 0 8 4 0 0 0 0 0 0 26 2 2670.227 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9JWF0;C9IYK2;C9JJ64;F8WCB7 Q9NTJ3 13 38 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 3;4 2.0381E-156 168.11 6 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2214 941 2397;2398;2399 3589;3590;3591;3592;3593;3594 5806;5807;5808;5809;5810;5811;5812;5813;5814;5815;5816;5817;5818;5819 5811 1670;1671;1672 0 RRPEDYDIHNSR RGRPSRREPVRDVGRRRPEDYDIHNSRKKP VGRRRPEDYDIHNSRKKPRIDYPPEFHQRP R R R S R K 0 3 1 2 0 0 1 0 1 1 0 0 0 0 1 1 0 0 1 0 0 0 12 2 1556.7444 J3QR07;Q96MU7 J3QR07 535 546 YTHDC1 YTH domain-containing protein 1 yes no 4 0.015275 19.74 1 0.4038 0.5253 NaN 1 Median 0.4038 0.5253 NaN 1 0 Median NaN NaN NaN 0 0 Median 6795600 4683900 2111700 6795600 4683900 2111700 0 0 0 2215 684 2400 3595 5820 5820 1 RRPPSPEPSTK ELLEVRRQQEEEERKRRPPSPEPSTKVSEE EERKRRPPSPEPSTKVSEEAESQQQWDTSK K R R T K V 0 2 0 0 0 0 1 0 0 0 0 1 0 0 4 2 1 0 0 0 0 0 11 2 1250.6731 D6W5C0;K9MS24;B2ZZ89;A0A087WUZ3;Q01082;B4DIF8 D6W5C0 2012 2022 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 2;3 0.00042005 73.435 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2216 185 2401 3596;3597;3598 5821;5822;5823;5824;5825 5824 265 0 RRSPPADAIPK ______________________________ RIAKRRSPPADAIPKSKKVKVSHRSHSTEP K R R P K S 2 2 0 1 0 0 0 0 0 1 0 1 0 0 3 1 0 0 0 0 0 0 11 2 1206.6833 C9JRH2;C9JMJ4;C9J3R0;C9JQZ4;C9JW69;Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;M0R1Q8 C9JRH2 9 19 RCC1 Regulator of chromosome condensation yes no 3 0.0017195 52.966 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2217 262 2402 3599 5826;5827 5827 357 0 RRSPSPTPTPGPSR ______________________________ RRRSPSPTPTPGPSRRGPSLGASSHQHSRR R R R S R R 0 3 0 0 0 0 0 1 0 0 0 0 0 0 5 3 2 0 0 0 0 0 14 2 1491.7906 F8WD88;P49450 F8WD88 15 28 CENPA Histone H3-like centromeric protein A yes no 3 0.00010557 64.244 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2218 640 2403;2404 3600;3601 5828;5829 5829 971;972 0 RRTFSLTEVR KEKKESGENPPPKLRRRTFSLTEVRGQVSE PPKLRRRTFSLTEVRGQVSESEDSITKQIE R R R V R G 0 3 0 0 0 0 1 0 0 0 1 0 0 1 0 1 2 0 0 1 0 0 10 2 1263.7048 Q59HG1;O95239;B3KNC0 Q59HG1 800 809 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A yes no 3 0.012261 60.401 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2219 717 2405 3602 5830;5831 5830 1090;1951 0 RSEKPPAGSICR ESSEGGERGDALSQKRSEKPPAGSICRAEP SQKRSEKPPAGSICRAEPEAGEEQAGDDRD K R S C R A 1 2 0 0 1 0 1 1 0 1 0 1 0 0 2 2 0 0 0 0 0 0 12 2 1356.6932 Q96J73;B4DZM3;Q53FR7;Q6PJJ2;P56182 Q96J73 131 142 RRP1 Ribosomal RNA processing protein 1 homolog A yes no 3 0.0041215 41.996 1 1 0.71236 0.89021 27.052 2 Median 0.8831 1.0779 NaN 1 0 Median 0.57463 0.73522 NaN 1 0 Median 15203000 8343600 6859500 7856400 3838800 4017600 7346700 4504800 2841900 2220 513 2406 3603;3604 5832;5833;5834 5832 2 RSELSQDAEPAGSQETK EILLREFEERRSLRKRSELSQDAEPAGSQE ELSQDAEPAGSQETKDSGSQEVLSELRVLS K R S T K D 2 1 0 1 0 2 3 1 0 0 1 1 0 0 1 3 1 0 0 0 0 0 17 1 1831.8548 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 433 449 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes no 3 1.4342E-08 54.171 1 0.76332 1.146 NaN 1 Median NaN NaN NaN 0 0 Median 0.76332 1.146 NaN 1 0 Median 25562000 12844000 12718000 0 0 0 25562000 12844000 12718000 2221 919 2407 3605 5835;5836 5836 2 RSGASEANLIVAK SRSQHDILQMICSKRRSGASEANLIVAKSW KRRSGASEANLIVAKSWADVVKLGAKQTQT R R S A K S 3 1 1 0 0 0 1 1 0 1 1 1 0 0 0 2 0 0 0 1 0 0 13 1 1314.7256 P46013;Q70L73 P46013 647 659 MKI67 Antigen KI-67 no no 2;3 0.010938 45.433 2 1.0865 1.4557 NaN 1 Median NaN NaN NaN 0 0 Median 1.0865 1.4557 NaN 1 0 Median 10279000 4747700 5531200 0 0 0 10279000 4747700 5531200 2222 762;865 2408 3606;3607 5837;5838 5837 2 RSGASGASAAPAASAAAALAPSATR RRSRSSAAAKLRGQKRSGASGASAAPAASA PAASAAAALAPSATRTRRSASQAGSKSQAV K R S T R T 12 2 0 0 0 0 0 2 0 0 1 0 0 0 2 5 1 0 0 0 0 0 25 1 2140.0985 Q7Z7K6 Q7Z7K6 17 41 CENPV Centromere protein V yes yes 3 0.0043941 29.855 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3371600 3371600 0 0 0 0 3371600 3371600 0 2223 871 2409 3608 5839;5840 5839 2 RSLATMDSPPHQK RFTPELQPKASQSRKRSLATMDSPPHQKQP RKRSLATMDSPPHQKQPQRGEVSQKTVIIK K R S Q K Q 1 1 0 1 0 1 0 0 1 0 1 1 1 0 2 2 1 0 0 0 0 0 13 1 1466.73 B4DYH4;Q14676 B4DYH4 1379 1391 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 3 0.00011537 66.809 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2224 508 2410 3609 5841 5841 97 747 0 RSLDPADERDDVLAK MDRMTEDALRLNLLKRSLDPADERDDVLAK RSLDPADERDDVLAKRLKMEGHEAMERLKM K R S A K R 2 2 0 4 0 0 1 0 0 0 2 1 0 0 1 1 0 0 0 1 0 0 15 2 1698.8537 A0A0U1RRM1;B3KSZ4;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 16 30 GATAD2B Transcriptional repressor p66-beta yes no 3 0.00033275 43.297 1 1.1556 1.5776 NaN 1 Median NaN NaN NaN 0 0 Median 1.1556 1.5776 NaN 1 0 Median 29032000 13401000 15631000 0 0 0 29032000 13401000 15631000 2225 276 2411 3610 5842 5842 1 RSLHSVSEER SKKKLTKKTESQSQKRSLHSVSEERTDEMT SQSQKRSLHSVSEERTDEMTHKETNEQEER K R S E R T 0 2 0 0 0 0 2 0 1 0 1 0 0 0 0 3 0 0 0 1 0 0 10 1 1198.6054 Q8WYP5;B3KRD0;H7C4S1 Q8WYP5 2059 2068 AHCTF1 Protein ELYS yes no 3 0.0020627 44.299 1 0.71961 0.91909 NaN 1 Median 0.71961 0.91909 NaN 1 0 Median NaN NaN NaN 0 0 Median 6145100 3498800 2646300 6145100 3498800 2646300 0 0 0 2226 897 2412 3611 5843 5843 1 RSPQQTVPYVVPLSPK ______________________________ SPQQTVPYVVPLSPKLPKTKEYASEGEPLF K R S P K L 0 1 0 0 0 2 0 0 0 0 1 1 0 0 4 2 1 0 1 3 0 0 16 1 1794.9992 H0Y6S1;B4DRC2;B4DZR9;Q9UQR0 H0Y6S1 14 29 SCML2 Sex comb on midleg-like protein 2 yes no 2;3 1.0591E-09 92.492 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2227 492 2413 3612;3613;3614 5844;5845;5846;5847;5848 5845 721;722 0 RSQAGVSSGAPPGR LSLPGYRPTTRSSARRSQAGVSSGAPPGRN RRSQAGVSSGAPPGRNSFYMGTCQDEPEQL R R S G R N 2 2 0 0 0 1 0 3 0 0 0 0 0 0 2 3 0 0 0 1 0 0 14 1 1325.68 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q59HB8;Q96HN5;H0YFY6;Q7Z757;Q9UNL7 A0A087WY61 1870 1883 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 yes no 3 0.0010225 42.947 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 4792900 4792900 0 0 0 0 4792900 4792900 0 2228 71 2414 3615 5849 5849 1 RSRPTSEGSDIESTEPQK EENMDTSNTSISKMKRSRPTSEGSDIESTE PTSEGSDIESTEPQKQCSKKKKKRDRVEAS K R S Q K Q 0 2 0 1 0 1 3 1 0 1 0 1 0 0 2 4 2 0 0 0 0 0 18 2 2002.9556 Q4G0J3;H0YA82;D6RFF0 Q4G0J3 253 270 LARP7 La-related protein 7 yes no 3 2.138E-05 43.611 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2229 832 2415 3616 5850 5850 1374 0 RSSDTSGNEASEIESVK CGLSLSSTPPGKEAKRSSDTSGNEASEIES SDTSGNEASEIESVKISAKKPGRKLRPISD K R S V K I 1 1 1 1 0 0 3 1 0 1 0 1 0 0 0 5 1 0 0 1 0 0 17 1 1794.8232 D6R9S4;Q09GN1;A5D8X7;Q71F23;A8K8D2 D6R9S4 77 93 CENPU;MLF1IP Centromere protein U yes no 2 5.9848E-06 53.252 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2230 320 2416 3617 5851 5851 484;485;1842 0 RSTITSR ERIAGEASRLAHYNKRSTITSREIQTAVRL SRLAHYNKRSTITSREIQTAVRLLLPGELA K R S S R E 0 2 0 0 0 0 0 0 0 1 0 0 0 0 0 2 2 0 0 0 0 0 7 1 819.45626 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;P57053;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257;Q6DRA6;Q6DN03 A0A024RCJ2 87 93 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C no no 2 0.029458 61.602 1 0.59204 1.0774 NaN 1 Median NaN NaN NaN 0 0 Median 0.59204 1.0774 NaN 1 0 Median 188950000 113010000 75939000 0 0 0 188950000 113010000 75939000 2231 10;158 2417 3618 5852 5852 1 RSVAVSDEEEVEEEAER TESPIKLSPATPSRKRSVAVSDEEEVEEEA VAVSDEEEVEEEAERRKERCKRGRFVVKEE K R S E R R 2 2 0 1 0 0 7 0 0 0 0 0 0 0 0 2 0 0 0 3 0 0 17 1 1961.8814 Q9Y6X9 Q9Y6X9 738 754 MORC2 MORC family CW-type zinc finger protein 2 yes yes 2;3 1.496E-09 83.758 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2232 969 2418 3619;3620 5853;5854;5855 5854 1760 0 RSVENQESVEIINDLK VKVSSVTKRTPRRIKRSVENQESVEIINDL SVENQESVEIINDLKVSTVTSPSRMIRKLR K R S L K V 0 1 2 1 0 1 3 0 0 2 1 1 0 0 0 2 0 0 0 2 0 0 16 1 1871.9589 Q8WYP5;B3KTD2;B3KVE5;B3KRD0 Q8WYP5 1877 1892 AHCTF1 Protein ELYS yes no 3 1.6974E-05 56.339 1 1.2943 1.6703 NaN 1 Median 1.2943 1.6703 NaN 1 0 Median NaN NaN NaN 0 0 Median 10803000 5726700 5076100 10803000 5726700 5076100 0 0 0 2233 897 2419 3621 5856;5857;5858;5859 5859 4 RSVQEGENPDDGVRGSPPEDYR ______________________________ NPDDGVRGSPPEDYRLGQVASSLFRGEHHS K R S Y R L 0 3 1 3 0 1 3 3 0 0 0 0 0 0 3 2 0 0 1 2 0 0 22 2 2458.1109 Q5TCT4;A2A2V2;P42696;H7C5M1 Q5TCT4 13 34 RBM34 RNA-binding protein 34 yes no 3;4 7.6372E-49 125.62 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2234 302 2420 3622;3623 5860;5861 5861 449 0 RSVYIESR LNGGLQEEELSTSLKRSVYIESRIGTSTSF ELSTSLKRSVYIESRIGTSTSFDSGIAGLS K R S S R I 0 2 0 0 0 0 1 0 0 1 0 0 0 0 0 2 0 0 1 1 0 0 8 1 1008.5352 O95235 O95235 243 250 KIF20A Kinesin-like protein KIF20A yes yes 2 0.023012 50.805 1 0.52371 0.89267 NaN 1 Median NaN NaN NaN 0 0 Median 0.52371 0.89267 NaN 1 0 Median 32476000 21076000 11400000 0 0 0 32476000 21076000 11400000 2235 716 2421 3624 5862 5862 1 RTAAENDFVTLK LVEDYKKKYEDEINKRTAAENDFVTLKKDV INKRTAAENDFVTLKKDVDNAYMIKVELQS K R T L K K 2 1 1 1 0 0 1 0 0 0 1 1 0 1 0 0 2 0 0 1 0 0 12 1 1363.7096 CON__P35908;P35908 CON__P35908 281 292 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 0.0057116 48.981 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 11367000 11367000 0 0 0 0 11367000 11367000 0 + 2236 583 2422 3625 5863 5863 1 RTADSSSSEDEEEYVVEK ______________________________ DSSSSEDEEEYVVEKVLDRRVVKGQVEYLL K R T E K V 1 1 0 2 0 0 5 0 0 0 0 1 0 0 0 4 1 0 1 2 0 0 18 1 2058.8866 V9HWG0;P45973;Q6I9T7;F8VNY3 V9HWG0 7 24 HEL25;CBX5 Chromobox protein homolog 5 yes no 2;3 4.2678E-11 70.942 3 0.19772 0.25807 NaN 1 Median 0.19772 0.25807 NaN 1 0 Median NaN NaN NaN 0 0 Median 24392000 20101000 4290600 24392000 20101000 4290600 0 0 0 2237 761 2423;2424;2425 3626;3627;3628 5864;5865;5866 5865 1200;1201 1 RTAFYNEDDSEEEQR LKGSEPHMRTRNQGRRTAFYNEDDSEEEQR RTAFYNEDDSEEEQRQLLFEDTSLTFGTSS R R T Q R Q 1 2 1 2 0 1 4 0 0 0 0 0 0 1 0 1 1 0 1 0 0 0 15 1 1887.7871 Q8WWQ0;Q9NWP3 Q8WWQ0 1774 1788 PHIP PH-interacting protein yes no 2 0.00076064 40.237 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2238 894 2426 3629 5867 5867 1507 0 RTEQEEDEELLTESSK DEKQNLLSVGDYRHRRTEQEEDEELLTESS TEQEEDEELLTESSKATNVCTRFEDSPSYV R R T S K A 0 1 0 1 0 1 6 0 0 0 2 1 0 0 0 2 2 0 0 0 0 0 16 1 1921.8753 B7ZAX9;B4DZC0;O60264;Q4W5G3 B7ZAX9 88 103 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes no 3 0.00026222 38.915 1 2.1743 3.2451 NaN 1 Median NaN NaN NaN 0 0 Median 2.1743 3.2451 NaN 1 0 Median 24117000 6373200 17744000 0 0 0 24117000 6373200 17744000 2239 510 2427 3630 5868 5868 1 RTFSLTEVR EKKESGENPPPKLRRRTFSLTEVRGQVSES PPKLRRRTFSLTEVRGQVSESEDSITKQIE R R T V R G 0 2 0 0 0 0 1 0 0 0 1 0 0 1 0 1 2 0 0 1 0 0 9 1 1107.6037 Q59HG1;O95239;B3KNC0 Q59HG1 801 809 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A yes no 2 0.023738 52.255 1 0.62067 1.0067 NaN 1 Median NaN NaN NaN 0 0 Median 0.62067 1.0067 NaN 1 0 Median 16240000 10268000 5972200 0 0 0 16240000 10268000 5972200 2240 717 2428 3631 5869 5869 1 RTLAEPPAK LEGTGKEGKKASSRKRTLAEPPAKGLLQPV KASSRKRTLAEPPAKGLLQPVKLSRAELYK K R T A K G 2 1 0 0 0 0 1 0 0 0 1 1 0 0 2 0 1 0 0 0 0 0 9 1 981.56073 A0A0A0MRW6;B4DF80;Q9H6R4 A0A0A0MRW6 39 47 NOL6 Nucleolar protein 6 yes no 2 0.0085841 57.96 1 0.90978 1.3454 NaN 1 Median NaN NaN NaN 0 0 Median 0.90978 1.3454 NaN 1 0 Median 22017000 10530000 11487000 0 0 0 22017000 10530000 11487000 2241 215 2429 3632 5870 5870 1 RTPAPPEPGSPAPGEGPSGR AENEPPEKETLSPPRRTPAPPEPGSPAPGE PEPGSPAPGEGPSGRKRRRVPRDGRRAGNA R R T G R K 2 2 0 0 0 0 2 4 0 0 0 0 0 0 7 2 1 0 0 0 0 0 20 1 1912.9391 A0A024R4Q5;P0C1Z6 A0A024R4Q5 171 190 TFPT TCF3 fusion partner yes no 3 6.4379E-10 50.857 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2242 63 2430 3633 5871 5871 69 0 RTPHVQAVQGPLGSPPK LQRVRRPVAMVMPARRTPHVQAVQGPLGSP PHVQAVQGPLGSPPKRGPLPTEEQRVYRRK R R T P K R 1 1 0 0 0 2 0 2 1 0 1 1 0 0 4 1 1 0 0 2 0 0 17 1 1767.9744 Q15149 Q15149 112 128 PLEC Plectin yes yes 3 3.9979E-06 55.02 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2243 822 2431 3634 5872 5872 1357 0 RTSPQVLGSILK GTEHPVFPKAYELEKRTSPQVLGSILKSGT LEKRTSPQVLGSILKSGTTSESGALSLEPS K R T L K S 0 1 0 0 0 1 0 1 0 1 2 1 0 0 1 2 1 0 0 1 0 0 12 1 1297.7718 Q7Z417 Q7Z417 570 581 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 2 0.0012823 55.452 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2244 869 2432 3635 5873 5873 1446;2014 0 RTSSAQVEGGVHSLHSYEK QVRAMMYSGELKFEKRTSSAQVEGGVHSLH AQVEGGVHSLHSYEKRLF____________ K R T E K R 1 1 0 0 0 1 2 2 2 0 1 1 0 0 0 4 1 0 1 2 0 0 19 1 2071.0083 H0Y4R1;P12268 H0Y4R1 449 467 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes no 4 0.0031058 22.221 1 0.50564 0.6402 NaN 1 Median 0.50564 0.6402 NaN 1 0 Median NaN NaN NaN 0 0 Median 5522100 3862000 1660100 5522100 3862000 1660100 0 0 0 2245 648 2433 3636 5874 5874 1 RVATWFNQPAR NGMVLKPHFHKDWQRRVATWFNQPARKIRR DWQRRVATWFNQPARKIRRRKARQAKARRI R R V A R K 2 2 1 0 0 1 0 0 0 0 0 0 0 1 1 0 1 1 0 1 0 0 11 1 1344.7051 J3QSB4;Q6NZ55;A8K4C8;P26373;H3BTH3;B4DGL7 J3QSB4 21 31 RPL13 60S ribosomal protein L13 yes no 3 0.00092161 37.327 1 0.67174 0.94953 NaN 1 Median NaN NaN NaN 0 0 Median 0.67174 0.94953 NaN 1 0 Median 7430300 4759400 2670800 0 0 0 7430300 4759400 2670800 2246 353 2434 3637 5875;5876 5876 2 RVCSSDSDSSLQVVK SASQDNGLSRKISRKRVCSSDSDSSLQVVK RVCSSDSDSSLQVVKKSSKARTGLLRITRR K R V V K K 0 1 0 2 1 1 0 0 0 0 1 1 0 0 0 5 0 0 0 3 0 0 15 1 1665.7992 Q9NSI6 Q9NSI6 1901 1915 BRWD1 Bromodomain and WD repeat-containing protein 1 yes yes 2 0.00014109 45.879 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2247 938 2435 3638 5877 5877 1660;1661;1662 0 RVCSSDSDSSLQVVKK SASQDNGLSRKISRKRVCSSDSDSSLQVVK VCSSDSDSSLQVVKKSSKARTGLLRITRRC K R V K K S 0 1 0 2 1 1 0 0 0 0 1 2 0 0 0 5 0 0 0 3 0 0 16 2 1793.8942 Q9NSI6 Q9NSI6 1901 1916 BRWD1 Bromodomain and WD repeat-containing protein 1 yes yes 3 0.00013575 45.33 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2248 938 2436 3639 5878 5878 1660;1661;1662 0 RVEILNEHR IGCGRLNEPIKVLCRRVEILNEHRGEKLNR IKVLCRRVEILNEHRGEKLNRVKMVEKEKD R R V H R G 0 2 1 0 0 0 2 0 1 1 1 0 0 0 0 0 0 0 0 1 0 0 9 1 1164.6364 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83 Q9NTJ3 273 281 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 3 0.001283 49.35 1 1 0.62575 0.90452 13.21 2 Median 0.63812 0.82385 NaN 1 0 Median 0.61362 0.99309 NaN 1 0 Median 27432000 16675000 10757000 11476000 6679300 4796600 15956000 9996100 5960000 2249 941 2437 3640;3641 5879;5880;5881 5879 3 RVETSEHFR LTRESTRGSRRTPRKRVETSEHFRIDGPVI RRTPRKRVETSEHFRIDGPVISESTPIAET K R V F R I 0 2 0 0 0 0 2 0 1 0 0 0 0 1 0 1 1 0 0 1 0 0 9 1 1159.5734 A0A024RBE7;P42167 A0A024RBE7 261 269 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes no 3 0.00012736 83.438 1 1 0.46785 0.60755 NaN 1 Median 0.46785 0.60755 NaN 1 0 Median NaN NaN NaN 0 0 Median 21407000 14714000 6693000 21407000 14714000 6693000 0 0 0 2250 141 2438 3642;3643 5882;5883 5882 2 RVIGQDHDFSESSEEEAPAEASSGALR MDFRKLSTFRESFKKRVIGQDHDFSESSEE SEEEAPAEASSGALRSKHGEKAPMTSRSTS K R V L R S 4 2 0 2 0 1 5 2 1 1 1 0 0 1 1 5 0 0 0 1 0 0 27 1 2873.3064 H7C1G8;H7C4B4;E9PHV6;Q53TD0;P23497 H7C1G8 46 72 SP100 Nuclear autoantigen Sp-100 yes no 3 1.3443E-15 54.375 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2251 617 2439 3644 5884 5884 940;941;942 0 RVPSPTPAPK SEGSSLPVQPEVALKRVPSPTPAPKEAVRE EVALKRVPSPTPAPKEAVREGRPPEPTPAK K R V P K E 1 1 0 0 0 0 0 0 0 0 0 1 0 0 4 1 1 0 0 1 0 0 10 1 1048.6029 A0A140VK53;Q9UQ35;O60382 A0A140VK53 2578 2587 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 yes no 2 0.0039805 53.237 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2252 284 2440 3645;3646 5885;5886 5886 408 0 RVPVPPAAGS RIKEARNSVCIIPLRRVPVPPAAGS_____ IIPLRRVPVPPAAGS_______________ R R V G S - 2 1 0 0 0 0 0 1 0 0 0 0 0 0 3 1 0 0 0 2 0 0 10 1 949.53451 O43818 O43818 466 475 RRP9 U3 small nucleolar RNA-interacting protein 2 yes yes 2 2.1436E-09 85.958 6 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2253 703 2441 3647;3648;3649;3650;3651;3652;3653 5887;5888;5889;5890;5891;5892;5893;5894 5890 1043 0 RVSFADTIK RVQESNALRNKKNSRRVSFADTIKVFQTES NKKNSRRVSFADTIKVFQTESHMKIVRKSE R R V I K V 1 1 0 1 0 0 0 0 0 1 0 1 0 1 0 1 1 0 0 1 0 0 9 1 1035.5713 E9PPJ1;Q8NG31;Q05C46 E9PPJ1 58 66 CASC5 Protein CASC5 yes no 2 0.01299 49.097 1 0.44868 0.58718 NaN 1 Median NaN NaN NaN 0 0 Median 0.44868 0.58718 NaN 1 0 Median 7480800 5552900 1927900 0 0 0 7480800 5552900 1927900 2254 627 2442 3654 5895 5895 1 RVSISEGDDK VTKNLVPGESVYGEKRVSISEGDDKIEYRA VYGEKRVSISEGDDKIEYRAWNPFRSKLAA K R V D K I 0 1 0 2 0 0 1 1 0 1 0 1 0 0 0 2 0 0 0 1 0 0 10 1 1104.5411 Q96BS4;P22087;M0QXL5;M0R2Q4;B4DLD4;M0R0P1;M0R299;M0R2U2;M0R1H0;M0R2B0 Q96BS4 61 70 FBL rRNA 2-O-methyltransferase fibrillarin yes no 2 0.00093525 73.499 1 0.54234 0.84907 NaN 1 Median NaN NaN NaN 0 0 Median 0.54234 0.84907 NaN 1 0 Median 78851000 49001000 29850000 0 0 0 78851000 49001000 29850000 2255 747 2443 3655 5896 5896 1 RVSISEGDDKIEYR VTKNLVPGESVYGEKRVSISEGDDKIEYRA KRVSISEGDDKIEYRAWNPFRSKLAAAILG K R V Y R A 0 2 0 2 0 0 2 1 0 2 0 1 0 0 0 2 0 0 1 1 0 0 14 2 1665.8322 Q96BS4;P22087;M0QXL5;M0R2Q4;B4DLD4;M0R0P1;M0R299;M0R2U2;M0R1H0;M0R2B0 Q96BS4 61 74 FBL rRNA 2-O-methyltransferase fibrillarin yes no 3 5.5381E-23 115.83 2 1 0.58166 0.76218 12.726 2 Median 0.67106 0.83394 NaN 1 0 Median 0.50418 0.69658 NaN 1 0 Median 73719000 46744000 26975000 34659000 21404000 13254000 39061000 25340000 13721000 2256 747 2444;2445 3656;3657;3658 5897;5898;5899;5900;5901;5902;5903 5902 1166 6 RVSLEPHQGPGTPESK QIAEGTGITTRQQRKRVSLEPHQGPGTPES VSLEPHQGPGTPESKKATSCFPRPMTPRDR K R V S K K 0 1 0 0 0 1 2 2 1 0 1 1 0 0 3 2 1 0 0 1 0 0 16 1 1717.8747 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q59HB8;Q96HN5;H0YFY6;Q7Z757;Q9UNL7 A0A087WY61 1973 1988 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 yes no 3 8.5551E-15 106.11 4 2 0.35681 0.5482 NaN 1 Median NaN NaN NaN 0 0 Median 0.35681 0.5482 NaN 1 0 Median 36622000 26652000 9969300 1725100 1725100 0 34896000 24927000 9969300 2257 71 2446;2447;2448 3659;3660;3661;3662;3663;3664 5904;5905;5906;5907;5908;5909;5910;5911 5904 90;1788 2 RVSLEPHQGPGTPESKK QIAEGTGITTRQQRKRVSLEPHQGPGTPES SLEPHQGPGTPESKKATSCFPRPMTPRDRH K R V K K A 0 1 0 0 0 1 2 2 1 0 1 2 0 0 3 2 1 0 0 1 0 0 17 2 1845.9697 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q59HB8;Q96HN5;H0YFY6;Q7Z757;Q9UNL7 A0A087WY61 1973 1989 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 yes no 3 6.0072E-06 62.237 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2258 71 2449 3665 5912 5912 90;1788 0 RVSPLNLSSVTP FFLPASLSANNTPTRRVSPLNLSSVTP___ PTRRVSPLNLSSVTP_______________ R R V T P - 0 1 1 0 0 0 0 0 0 0 2 0 0 0 2 3 1 0 0 2 0 0 12 1 1268.7089 Q9UJX2 Q9UJX2 586 597 CDC23 Cell division cycle protein 23 homolog yes yes 2 0.00086716 67.115 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2259 953 2450 3666 5913 5913 1708;2053 0 RVTFEADENENITVVK ______________________________ VTFEADENENITVVKGIRLSENVIDRMKES R R V V K G 1 1 2 1 0 0 3 0 0 1 0 1 0 1 0 0 2 0 0 3 0 0 16 1 1862.9374 A4D1N4;C9JRZ6;Q9NX63;B7Z1X9;F8WAR4;F8WD73 A4D1N4 9 24 CHCHD3 MICOS complex subunit MIC19 yes no 3 9.4968E-10 89.358 4 1 1.0112 1.2789 144.57 2 Median 0.3544 0.46011 NaN 1 0 Median 2.8851 3.5548 NaN 1 0 Median 25080000 18537000 6543100 21019000 17092000 3927500 4060800 1445200 2615600 2260 311 2451 3667;3668;3669;3670;3671 5914;5915;5916;5917;5918 5917 5 RVTIMPK FKTDLRFQSAAIHAKRVTIMPKDIQLARRI QSAAIHAKRVTIMPKDIQLARRIRGERA__ K R V P K D 0 1 0 0 0 0 0 0 0 1 0 1 1 0 1 0 1 0 0 1 0 0 7 1 843.50004 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;Q6NXT2;A8K4Y7;Q5TEC6 B4E380 94 100 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C no no 2 0.0032828 78.616 1 2 0.47766 0.79496 5.0779 3 Median 0.65634 0.85474 NaN 1 0 Median 0.47077 0.78495 1.7912 2 0 Median 2460300000 1656200000 804120000 37753000 19849000 17904000 2422600000 1636300000 786210000 2261 399;849 2452 3672;3673;3674 5919;5920;5921;5922 5919 80 4 RVVFLK PGTILIILTGRHRGKRVVFLKQLASGLLLV ILTGRHRGKRVVFLKQLASGLLLVTGPLVL K R V L K Q 0 1 0 0 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 2 0 0 6 1 760.49594 Q8TBK5;Q8N5Z7;A0A024RBK3;Q02878;B4DRX3;B2R4K7;F8VR69 Q8TBK5 161 166 RPL6 60S ribosomal protein L6 yes no 2 0.0012525 92.785 1 0.3887 0.58108 NaN 1 Median NaN NaN NaN 0 0 Median 0.3887 0.58108 NaN 1 0 Median 24510000 17418000 7092000 0 0 0 24510000 17418000 7092000 2262 146 2453 3675 5923 5923 1 RVYLSDSDNNSLETGEILK PVSLANGCGRKATRKRVYLSDSDNNSLETG SDSDNNSLETGEILKARAGNNRKVLRKCAA K R V L K A 0 1 2 2 0 0 2 1 0 1 3 1 0 0 0 3 1 0 1 1 0 0 19 1 2152.0648 Q9NSI6 Q9NSI6 1601 1619 BRWD1 Bromodomain and WD repeat-containing protein 1 yes yes 2 4.5903E-07 53.252 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2263 938 2454 3676 5924 5924 1663;1664;1665 0 RYESHPVCADLQAK EQYQKAAEEVEAKFKRYESHPVCADLQAKI KRYESHPVCADLQAKILQCYRENTHQTLKC K R Y A K I 2 1 0 1 1 1 1 0 1 0 1 1 0 0 1 1 0 0 1 1 0 0 14 1 1672.7991 A4D1N4;C9JRZ6;Q9NX63 A4D1N4 176 189 CHCHD3 MICOS complex subunit MIC19 yes no 3 0.00061383 45.863 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1829800 1829800 0 1829800 1829800 0 0 0 0 2264 311 2455 3677 5925 5925 1 RYIFDNVAK VTTEELKTWIKRVQKRYIFDNVAKVWKDYD IKRVQKRYIFDNVAKVWKDYDRDKDDKISW K R Y A K V 1 1 1 1 0 0 0 0 0 1 0 1 0 1 0 0 0 0 1 1 0 0 9 1 1124.5978 V9HW95;Q15293 V9HW95 114 122 HEL-S-84;RCN1 Reticulocalbin-1 yes no 2 0.0060075 61.962 1 0.40302 0.51716 NaN 1 Median NaN NaN NaN 0 0 Median 0.40302 0.51716 NaN 1 0 Median 5923100 3831000 2092100 0 0 0 5923100 3831000 2092100 2265 823 2456 3678 5926 5926 1 RYLDGLTAER INLEPIFQGYIDSLKRYLDGLTAERTSQNS IDSLKRYLDGLTAERTSQNSELNNMQDLVE K R Y E R T 1 2 0 1 0 0 1 1 0 0 2 0 0 0 0 0 1 0 1 0 0 0 10 1 1192.62 CON__P35908;P35908 CON__P35908 244 253 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 0.0064338 55.549 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 5333500 5333500 0 0 0 0 5333500 5333500 0 + 2266 583 2457 3679 5927 5927 1 RYLTSFPIDDR VPSFGEAMAYFAMVKRYLTSFPIDDRVQSH AMVKRYLTSFPIDDRVQSHILHLEHDLVHV K R Y D R V 0 2 0 2 0 0 0 0 0 1 1 0 0 1 1 1 1 0 1 0 0 0 11 1 1381.699 P07199;Q71VN3 P07199 556 566 CENPB Major centromere autoantigen B yes no 3 0.010025 27.681 1 0.73388 0.93061 NaN 1 Median NaN NaN NaN 0 0 Median 0.73388 0.93061 NaN 1 0 Median 3498300 1473800 2024500 0 0 0 3498300 1473800 2024500 2267 728 2458 3680 5928 5928 1 RYPSSISSSPQK NAQGPLYEQRSTQTRRYPSSISSSPQKDLT QTRRYPSSISSSPQKDLTQAKNGFSSVQAT R R Y Q K D 0 1 0 0 0 1 0 0 0 1 0 1 0 0 2 5 0 0 1 0 0 0 12 1 1335.6783 B4DZJ6;B4DYY5;F8W726;Q14157 B4DZJ6 515 526 UBAP2L Ubiquitin-associated protein 2-like yes no 2 0.0023426 50.46 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2268 509 2459 3681 5929;5930 5929 748 0 RYSSEVATESPLDFTK QGDSFLNEDLNQLIKRYSSEVATESPLDFT YSSEVATESPLDFTKYLKTSLH________ K R Y T K Y 1 1 0 1 0 0 2 0 0 0 1 1 0 1 1 3 2 0 1 1 0 0 16 1 1828.8843 A8K905;Q8WTT2 A8K905 778 793 NOC3L Nucleolar complex protein 3 homolog yes no 2 1.1731E-05 64.507 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2269 374 2460 3682;3683 5931;5932;5933 5931 570 0 SADIGAEGAPSHLK ALRNHVRVHCKAARRSADIGAEGAPSHLKV RSADIGAEGAPSHLKVELPPDPVEAEAAPH R S A L K V 3 0 0 1 0 0 1 2 1 1 1 1 0 0 1 2 0 0 0 0 0 0 14 0 1351.6732 B4E3P6;O15015 B4E3P6 521 534 ZNF646 Zinc finger protein 646 yes no 2 0.0015639 48.214 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2270 525 2461 3684 5934 5934 760 0 SAGEEEDGPVLTDEQK QVEALPGPSLDQWHRSAGEEEDGPVLTDEQ AGEEEDGPVLTDEQKSRIQAMKPMTKEEWD R S A Q K S 1 0 0 2 0 1 4 2 0 0 1 1 0 0 1 1 1 0 0 1 0 0 16 0 1702.7534 F5GYV5;H7BZV4;B2RE15;A0A0C4DG62;F8WCT1;F5H7X4;Q8TEM4;Q66PJ3 F5GYV5 140 155 ARL6IP4;FLJ00169 ADP-ribosylation factor-like protein 6-interacting protein 4 yes no 2 5.9941E-06 60.918 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2271 241 2462 3685 5935 5935 333 0 SAGQGEVLVYVEDPAGHQEEAK GNMVKKRAEFTVETRSAGQGEVLVYVEDPA LVYVEDPAGHQEEAKVTANNDKNRTFSVWY R S A A K V 3 0 0 1 0 2 4 3 1 0 1 1 0 0 1 1 0 0 1 3 0 0 22 0 2312.0921 Q5HY54;Q60FE6;Q60FE5;P21333;A6NDY9;A0A087WWY3;F8WE98 Q5HY54 310 331 FLNA Filamin-A yes no 3 0.0043499 35.992 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 4001200 0 4001200 0 0 0 4001200 0 4001200 2272 746 2463 3686 5936 5936 1 SAHIQASGHLEEQTPR TIARGRSHGARSVGRSAHIQASGHLEEQTP AHIQASGHLEEQTPRTLLKNILLTAPESSI R S A P R T 2 1 0 0 0 2 2 1 2 1 1 0 0 0 1 2 1 0 0 0 0 0 16 0 1759.8602 B3KPB2;A8K662;Q96BT3;H3BQJ0;I3L4F8;H3BUW2;H3BTR4 B3KPB2 72 87 CENPT Centromere protein T yes no 3 0.00024379 40.968 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2273 363 2464 3687 5937 5937 1856 0 SAHTLVGPTPSR SSGSEEDGEGPQGAKSAHTLVGPTPSRTET GAKSAHTLVGPTPSRTETLVEETAAESSED K S A S R T 1 1 0 0 0 0 0 1 1 0 1 0 0 0 2 2 2 0 0 1 0 0 12 0 1221.6466 E7ETY2 E7ETY2 1167 1178 TCOF1 yes yes 3 0.0037109 41.48 1 1.0144 1.3157 NaN 1 Median NaN NaN NaN 0 0 Median 1.0144 1.3157 NaN 1 0 Median 13768000 7407600 6360700 0 0 0 13768000 7407600 6360700 2274 608 2465 3688 5938;5939 5939 2 SAIDLTPIVVEDK TEPKGAADVEKVEEKSAIDLTPIVVEDKEE EKSAIDLTPIVVEDKEEKKEEEEKKEVMLQ K S A D K E 1 0 0 2 0 0 1 0 0 2 1 1 0 0 1 1 1 0 0 2 0 0 13 0 1398.7606 B3KY63;F5GWX5;A0A0C4DGG9;Q14839 B3KY63 1622 1634 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 2 0.0015819 50.897 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2275 244 2466 3689 5940 5940 1822 0 SAINEVVTR ______________________________ EKKKGRSAINEVVTREYTINIHKRIHGVGF R S A T R E 1 1 1 0 0 0 1 0 0 1 0 0 0 0 0 1 1 0 0 2 0 0 9 0 987.53491 B2R4C1;P62899;B8ZZK4;H7C2W9;C9JU56;B7Z4E3;B7Z4C8 B2R4C1 15 23 RPL31 60S ribosomal protein L31 yes no 2 0.0028513 66.962 1 0.3512 0.47031 NaN 1 Median NaN NaN NaN 0 0 Median 0.3512 0.47031 NaN 1 0 Median 31487000 22848000 8639400 0 0 0 31487000 22848000 8639400 2276 398 2467 3690 5941;5942 5942 2 SANNTPENSPNFPNFR FVELLSPRRKRRGRKSANNTPENSPNFPNF ANNTPENSPNFPNFRVIATKSSEQSRSVNI K S A F R V 1 1 5 0 0 0 1 0 0 0 0 0 0 2 3 2 1 0 0 0 0 0 16 0 1804.8129 D3DS96;Q9NRL2;B3KND8;Q59G54 D3DS96 1362 1377 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes no 2 6.8427E-151 178.02 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2277 591 2468;2469 3691;3692;3693;3694 5943;5944;5945;5946;5947;5948;5949 5945 881;882;1910 0 SAPDTQERPPVR GKFGPARKSGSRQKKSAPDTQERPPVRATG QKKSAPDTQERPPVRATGARAKKAPQRAQD K S A V R A 1 2 0 1 0 1 1 0 0 0 0 0 0 0 3 1 1 0 0 1 0 0 12 1 1351.6844 Q8N884 Q8N884 64 75 MB21D1 Cyclic GMP-AMP synthase yes yes 2;3 0.0013139 53.683 3 0.85116 1.3346 7.8923 2 Median NaN NaN NaN 0 0 Median 0.85116 1.3346 7.8923 2 0 Median 48421000 27305000 21116000 0 0 0 48421000 27305000 21116000 2278 881 2470;2471 3695;3696;3697 5950;5951;5952 5950 1484 2 SASAPAAEGEGTPTQPASEK ______________________________ AAEGEGTPTQPASEKEPEMPGPREESEEEE M S A E K E 5 0 0 0 0 1 3 2 0 0 0 1 0 0 3 3 2 0 0 0 0 0 20 0 1884.8701 P35659;B4DFG0 P35659 2 21 DEK Protein DEK yes no 2 1.0574E-124 160.55 1 5 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2279 754 2472;2473 3698;3699;3700;3701;3702;3703 5953;5954;5955;5956;5957;5958;5959;5960;5961;5962;5963;5964;5965;5966 5964 1966 0 SASPSVPGPTKPK TSPGGSPSSPSSGQRSASPSVPGPTKPKPK QRSASPSVPGPTKPKPKTKRFQLPLDKGNG R S A P K P 1 0 0 0 0 0 0 1 0 0 0 2 0 0 4 3 1 0 0 1 0 0 13 1 1251.6823 Q03164;B4E012 Q03164 3525 3537 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes no 2;3 0.0010543 68.277 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2280 798 2474 3704;3705 5967;5968;5969 5968 1292 0 SASSNSAEAGGDTVTLDDILSLK LEAIVQKITSPNIRRSASSNSAEAGGDTVT AGGDTVTLDDILSLKSGPPEGGSVAVQDAD R S A L K S 3 0 1 3 0 0 1 2 0 1 3 1 0 0 0 5 2 0 0 1 0 0 23 0 2250.0863 W5ZR30;Q9UGU0 W5ZR30 1367 1389 TCF20 Transcription factor 20 yes no 2 9.7333E-17 78.456 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2281 949 2475 3706 5970;5971 5971 1691;1692;1693 0 SATIVADLSETTIQTPDGEER PERCGEGKGCVGGAKSATIVADLSETTIQT DLSETTIQTPDGEERLGGEAHSMVWDPSGE K S A E R L 2 1 0 2 0 1 3 1 0 2 1 0 0 0 1 2 4 0 0 1 0 0 21 0 2232.0758 F8VZ44;B4DDU7;Q53HS1;Q9NRG9;H3BU82 F8VZ44 250 270 AAAS Aladin yes no 2 0.00037015 32.734 1 0.45919 0.57464 NaN 1 Median 0.45919 0.57464 NaN 1 0 Median NaN NaN NaN 0 0 Median 3321100 2135700 1185400 3321100 2135700 1185400 0 0 0 2282 457 2476 3707 5972 5972 1 SATRPSPSPERSSTGPEPPAPTPLLAER PSSPYEDKDKDKKEKSATRPSPSPERSSTG TGPEPPAPTPLLAERHGGSPQPLATTPLSQ K S A E R H 3 3 0 0 0 0 3 1 0 0 2 0 0 0 8 5 3 0 0 0 0 0 28 2 2884.4679 A0A140VK53;Q9UQ35;I3L4D8;I3L182;Q9UQ39;I3L1I8 A0A140VK53 346 373 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 3 1.4475E-09 41.591 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2283 284 2477 3708 5973 5973 409;410 0 SCDSPLNLK LPASGGPLTCKVCGKSCDSPLNLKTHFRTH CKVCGKSCDSPLNLKTHFRTHGMAFIRARQ K S C L K T 0 0 1 1 1 0 0 0 0 0 2 1 0 0 1 2 0 0 0 0 0 0 9 0 1032.491 Q8N1G0 Q8N1G0 1208 1216 ZNF687 Zinc finger protein 687 yes yes 2 1.043E-13 112.13 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2284 879 2478 3709;3710 5974;5975;5976;5977 5974 1481 0 SCFESSPDPELK TSPQANEQSVTPQRRSCFESSPDPELKSRT QRRSCFESSPDPELKSRTPSRHSCSGSSPP R S C L K S 0 0 0 1 1 0 2 0 0 0 1 1 0 1 2 3 0 0 0 0 0 0 12 0 1394.6024 A0A140VK53;Q9UQ35;I3L4D8;I3L182;Q9UQ39 A0A140VK53 871 882 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 0.00014913 79.492 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2285 284 2479 3711 5978;5979 5978 411 0 SCINLPTVLPGSPSK ______________________________ SCINLPTVLPGSPSKTRGQIQVILGPMFSG M S C S K T 0 0 1 0 1 0 0 1 0 1 2 1 0 0 3 3 1 0 0 1 0 0 15 0 1568.8232 K7ENW5;K7ES52;K7ERJ1;B5BUF9;B5BU32;K7ERV3;P04183 K7ENW5 2 16 TK1 Thymidine kinase;Thymidine kinase, cytosolic yes no 2 4.659E-05 48.741 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2286 527 2480 3712 5980 5980 762;763 0 SCSGVEFSTSGHAYTDTGK KGYGFGMVKIDLKTKSCSGVEFSTSGHAYT VEFSTSGHAYTDTGKASGNLETKYKVCNYG K S C G K A 1 0 0 1 1 0 1 3 1 0 0 1 0 1 0 4 3 0 1 1 0 0 19 0 1989.8374 E5RHE1;E5RJN6;E5RHZ6;Q9Y277 E5RHE1 35 53 VDAC3 Voltage-dependent anion-selective channel protein 3 yes no 3 0.0018422 26.352 1 0.69391 0.83997 NaN 1 Median 0.69391 0.83997 NaN 1 0 Median NaN NaN NaN 0 0 Median 38304000 22440000 15864000 38304000 22440000 15864000 0 0 0 2287 603 2481 3713 5981 5981 1 SCSGVEFSTSGSSNTDTGK KGFGFGLVKLDVKTKSCSGVEFSTSGSSNT VEFSTSGSSNTDTGKVTGTLETKYKWCEYG K S C G K V 0 0 1 1 1 0 1 3 0 0 0 1 0 1 0 6 3 0 0 1 0 0 19 0 1906.7851 Q5JSD2;Q5JSD1;A0A0A0MR02;A0A024QZT0;A0A024QZN9;P45880;A2A3S1 Q5JSD2 46 64 VDAC2 Voltage-dependent anion-selective channel protein 2 yes no 2 8.3751E-05 42.209 1 0.58437 0.72665 NaN 1 Median 0.58437 0.72665 NaN 1 0 Median NaN NaN NaN 0 0 Median 19635000 13522000 6113600 19635000 13522000 6113600 0 0 0 2288 7 2482 3714 5982;5983 5982 2 SCSSPAVSAVSQLPLSPK GNLPPAEVATTNEERSCSSPAVSAVSQLPL SPAVSAVSQLPLSPKETVESHDKAIANALK R S C P K E 2 0 0 0 1 1 0 0 0 0 2 1 0 0 3 6 0 0 0 2 0 0 18 0 1813.9244 Q9Y2F5 Q9Y2F5 1888 1905 ICE1 Little elongation complex subunit 1 yes yes 2 3.1137E-06 57.009 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2289 962 2483 3715 5984 5984 1732;1733 0 SCTPSPDQISHR GSQEFLASASASAERSCTPSPDQISHRASL AERSCTPSPDQISHRASLEDAPVDDLTRKF R S C H R A 0 1 0 1 1 1 0 0 1 1 0 0 0 0 2 3 1 0 0 0 0 0 12 0 1383.6201 A8K9U6;Q7Z2W4;C9J6P4 A8K9U6 271 282 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 2 0.00024564 88.552 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2290 380 2484;2485 3716;3717;3718 5985;5986;5987;5988 5988 579;1862 0 SDAYYCTGDVTAWTK ALLPCEECSGQLVFKSDAYYCTGDVTAWTK SDAYYCTGDVTAWTKCMVKTQTPNRKEWVT K S D T K C 2 0 0 2 1 0 0 1 0 0 0 1 0 0 0 1 3 1 2 1 0 0 15 0 1736.7352 A0A024R3T8;P09874;B2R5W3;B4E0E1 A0A024R3T8 306 320 PARP1 Poly [ADP-ribose] polymerase 1 yes no 2 1.6957E-06 66.498 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 8958300 8958300 0 0 0 0 8958300 8958300 0 2291 56 2486 3719 5989 5989 1 SDEFRPQNYHQQDFR RDYYDRHHHDSKRRRSDEFRPQNYHQQDFR SDEFRPQNYHQQDFRRMSDHRPAMGYHGQG R S D F R R 0 2 1 2 0 3 1 0 1 0 0 0 0 2 1 1 0 0 1 0 0 0 15 1 1965.8718 O14647 O14647 1728 1742 CHD2 Chromodomain-helicase-DNA-binding protein 2 yes yes 3 0.00027923 46.964 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2292 697 2487 3720 5990 5990 1031 0 SDHLIQTDTVNLHR AFEEAVRRVLATEDRSDHLIQTDTVNLHRK RSDHLIQTDTVNLHRKPKPSSSCC______ R S D H R K 0 1 1 2 0 1 0 0 2 1 2 0 0 0 0 1 2 0 0 1 0 0 14 0 1647.8329 A0A024RBV5;P51151 A0A024RBV5 179 192 RAB9A Ras-related protein Rab-9A yes no 3 0.0006253 49.149 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3662200 0 3662200 0 0 0 3662200 0 3662200 2293 150 2488 3721 5991 5991 1 SDHPGISITDLSK SAYMLWLNASREKIKSDHPGISITDLSKKA IKSDHPGISITDLSKKAGEIWKGMSKEKKE K S D S K K 0 0 0 2 0 0 0 1 1 2 1 1 0 0 1 3 1 0 0 0 0 0 13 0 1368.6885 A0A024R4Z6;Q08945;A0A0U1RRK2 A0A024R4Z6 567 579 SSRP1 FACT complex subunit SSRP1 yes no 3 0.0040516 24.225 1 0.73661 0.97175 NaN 1 Median NaN NaN NaN 0 0 Median 0.73661 0.97175 NaN 1 0 Median 14307000 8126800 6180200 0 0 0 14307000 8126800 6180200 2294 65 2489 3722 5992 5992 1 SDIASHFSNK RREIEKLAASLWLWKSDIASHFSNKRKKCV LWLWKSDIASHFSNKRKKCVRDCEKYKPGV K S D N K R 1 0 1 1 0 0 0 0 1 1 0 1 0 1 0 3 0 0 0 0 0 0 10 0 1104.52 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 798 807 ADNP Activity-dependent neuroprotector homeobox protein yes no 2 0.00034402 74.987 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2295 413 2490 3723;3724 5993;5994;5995;5996 5995 609 0 SDKTEEIAEEEETVFPK LRKQTEEKEKKEKPKSDKTEEIAEEEETVF KTEEIAEEEETVFPKAKQVKKKAEPSEVDM K S D P K A 1 0 0 1 0 0 6 0 0 1 0 2 0 1 1 1 2 0 0 1 0 0 17 1 1979.9211 Q9NR30;Q3SWU7 Q9NR30 38 54 DDX21 Nucleolar RNA helicase 2 yes no 3 6.1762E-09 69.522 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 6283600 6283600 0 0 0 0 6283600 6283600 0 2296 934 2491 3725 5997;5998 5998 2 SDLRKSPVFSDEDSDLDFDISK NDDPEMGERAENSSKSDLRKSPVFSDEDSD VFSDEDSDLDFDISKLEQQSKVQNKGQGKP K S D S K L 0 1 0 6 0 0 1 0 0 1 2 2 0 2 1 5 0 0 0 1 0 0 22 2 2514.1762 O00566;B3KPV5;U3KQ48 O00566 158 179 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 yes no 3 3.8466E-11 59.598 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2297 695 2492 3726 5999 5999 1023;1024;1025 0 SDNDDIEVESDEEQPR ______________________________ DNDDIEVESDEEQPRFQSAADKRAHHNALE M S D P R F 0 1 1 4 0 1 4 0 0 1 0 0 0 0 1 2 0 0 0 1 0 0 16 0 1875.7606 A0A024R682;G3V5L1;P61244 A0A024R682 2 17 MAX Protein max yes no 2 1.2296E-22 83.253 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2298 80 2493 3727;3728 6000;6001 6001 108;109 0 SDPDGGDSPLPASGGPLTCK ALGLGDGEEEAPPSRSDPDGGDSPLPASGG GDSPLPASGGPLTCKVCGKSCDSPLNLKTH R S D C K V 1 0 0 3 1 0 0 4 0 0 2 1 0 0 4 3 1 0 0 0 0 0 20 0 1926.8629 Q8N1G0 Q8N1G0 1184 1203 ZNF687 Zinc finger protein 687 yes yes 2 4.1181E-08 58.49 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2299 879 2494 3729;3730 6002;6003 6003 1482 0 SDQEAKPSTEDLGDK ______________________________ SDQEAKPSTEDLGDKKEGEYIKLKVIGQDS M S D D K K 1 0 0 3 0 1 2 1 0 0 1 2 0 0 1 2 1 0 0 0 0 0 15 1 1618.7322 B8ZZJ0;B9A032;A0A024R3Z2;B8ZZN6;P63165 B8ZZJ0 2 16 SUMO1 Small ubiquitin-related modifier 1 yes no 2 0.00048919 52.372 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2300 57 2495 3731 6004 6004 62 0 SDQEAKPSTEDLGDKK ______________________________ DQEAKPSTEDLGDKKEGEYIKLKVIGQDSS M S D K K E 1 0 0 3 0 1 2 1 0 0 1 3 0 0 1 2 1 0 0 0 0 0 16 2 1746.8272 B8ZZJ0;B9A032;A0A024R3Z2;B8ZZN6;P63165 B8ZZJ0 2 17 SUMO1 Small ubiquitin-related modifier 1 yes no 2;3 5.4004E-10 95.5 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2301 57 2496 3732;3733;3734;3735 6005;6006;6007;6008;6009 6005 62 0 SDSEDICLFTK SKELRVRLTLPHSIRSDSEDICLFTKDEPN HSIRSDSEDICLFTKDEPNSTPEKTEQFYR R S D T K D 0 0 0 2 1 0 1 0 0 1 1 1 0 1 0 2 1 0 0 0 0 0 11 0 1313.5809 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L234;I3L3C4 O76021 90 100 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 2 0.003323 60.161 2 1 0.54497 0.68119 NaN 1 Median 0.54497 0.68119 NaN 1 0 Median NaN NaN NaN 0 0 Median 4511000 2721900 1789100 4511000 2721900 1789100 0 0 0 2302 712 2497;2498 3736;3737;3738 6010;6011;6012 6010 1067;1068 0 SDSFENPVLQQHFR GKMKAIVEKLRFTYRSDSFENPVLQQHFRN RSDSFENPVLQQHFRNLEALALDLMEPEQA R S D F R N 0 1 1 1 0 2 1 0 1 0 1 0 0 2 1 2 0 0 0 1 0 0 14 0 1702.8063 B4DE32;B1AHC9;A0A024R1N4;P12956;B4E356;B2RDN9;Q6IC76 B4DE32 425 438 XRCC6;G22P1 X-ray repair cross-complementing protein 6 yes no 3 0.00084253 48.112 1 0.58241 0.75027 NaN 1 Median NaN NaN NaN 0 0 Median 0.58241 0.75027 NaN 1 0 Median 19608000 12696000 6911500 0 0 0 19608000 12696000 6911500 2303 33 2499 3739 6013;6014 6014 2 SDSKEDENLVINEVINSPK KTSQKHVKRKVLEVKSDSKEDENLVINEVI EDENLVINEVINSPKGKKRKVEHQTACACS K S D P K G 0 0 3 2 0 0 3 0 0 2 1 2 0 0 1 3 0 0 0 2 0 0 19 1 2129.0488 A0A024RC19;Q5FWF5 A0A024RC19 184 202 ESCO1 N-acetyltransferase ESCO1 yes no 3 6.0609E-07 52.298 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2304 151 2500 3740 6015 6015 212 0 SDTPEVHPPLPISQSPENESNDR DSQASEEIQVLPEERSDTPEVHPPLPISQS PLPISQSPENESNDRRSRRYSVSERSFGSR R S D D R R 0 1 2 2 0 1 3 0 1 1 1 0 0 0 5 4 1 0 0 1 0 0 23 0 2544.1728 Q03164;E9PR05 Q03164 504 526 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes no 3 1.4411E-05 47.919 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2305 798 2501 3741 6016 6016 1293;1294 0 SDTPEVHPPLPISQSPENESNDRR DSQASEEIQVLPEERSDTPEVHPPLPISQS LPISQSPENESNDRRSRRYSVSERSFGSRT R S D R R S 0 2 2 2 0 1 3 0 1 1 1 0 0 0 5 4 1 0 0 1 0 0 24 1 2700.2739 Q03164;E9PR05 Q03164 504 527 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes no 3 4.3577E-16 58.858 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2306 798 2502 3742 6017 6017 1293;1294 0 SDTYYQSPTGDR KRREVFRKSGATCGRSDTYYQSPTGDRIRS CGRSDTYYQSPTGDRIRSKVELTRYLGPAC R S D D R I 0 1 0 2 0 1 0 1 0 0 0 0 0 0 1 2 2 0 2 0 0 0 12 0 1388.5844 B4DUR3;A0A0A0MS90;A8K654;B4DI41;Q9UIS9 B4DUR3 31 42 MBD1 Methyl-CpG-binding domain protein 1 yes no 2 0.00049837 83.358 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2307 220 2503 3743 6018;6019 6018 308 0 SDVYYFSPSGK KKEEVIRKSGLSAGKSDVYYFSPSGKKFRS SAGKSDVYYFSPSGKKFRSKPQLARYLGNT K S D G K K 0 0 0 1 0 0 0 1 0 0 0 1 0 1 1 3 0 0 2 1 0 0 11 0 1248.5663 Q9UBB5;X6RBL6;A0A024R2B8 Q9UBB5 175 185 MBD2 Methyl-CpG-binding domain protein 2 yes no 2 2.7233E-14 113.24 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2308 947 2504 3744;3745;3746 6020;6021;6022;6023;6024;6025;6026;6027;6028 6022 1684;1685 0 SDVYYFSPSGKK KKEEVIRKSGLSAGKSDVYYFSPSGKKFRS AGKSDVYYFSPSGKKFRSKPQLARYLGNTV K S D K K F 0 0 0 1 0 0 0 1 0 0 0 2 0 1 1 3 0 0 2 1 0 0 12 1 1376.6612 Q9UBB5;X6RBL6;A0A024R2B8 Q9UBB5 175 186 MBD2 Methyl-CpG-binding domain protein 2 yes no 2 0.0011557 62.042 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2309 947 2505 3747;3748 6029;6030;6031 6031 1684;1685 0 SEAAAPHTDAGGGLSSDEEEGTSSQAEAAR GLLIRERLKRRYGPKSEAAAPHTDAGGGLS SDEEEGTSSQAEAARILAASWPQNREDEEK K S E A R I 7 1 0 2 0 1 5 4 1 0 1 0 0 0 1 5 2 0 0 0 0 0 30 0 2887.234 X5DRB1;D9I4E1;A8K146;A0A024R2M8;Q01831 X5DRB1 869 898 XPC DNA repair protein complementing XP-C cells yes no 3 5.6365E-10 43.256 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2310 48 2506 3749 6032 6032 48;49 0 SEAAEPPKTPPSSCDSTNAAIAK KDARKGPLVPFPNQKSEAAEPPKTPPSSCD TPPSSCDSTNAAIAKQALKKPIKGKQAPRK K S E A K Q 5 0 1 1 1 0 2 0 0 1 0 2 0 0 4 4 2 0 0 0 0 0 23 1 2328.0904 E3VVS3;A0A0C4DFR3;Q9NQR1;C9JKQ0 E3VVS3 102 124 SETD8 N-lysine methyltransferase SETD8 yes no 3 2.9278E-24 99.614 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2311 239 2507 3750;3751 6033;6034 6033 1821 0 SEAASPALPVITK LADAPKEAEKKVVIKSEAASPALPVITKVE IKSEAASPALPVITKVETLSPESALQGSPR K S E T K V 3 0 0 0 0 0 1 0 0 1 1 1 0 0 2 2 1 0 0 1 0 0 13 0 1282.7133 I6ZZT5;Q99958 I6ZZT5 44 56 FOXC2 Forkhead box protein C2 yes no 2 6.8538E-05 68.83 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2312 678 2508 3752 6035;6036 6036 1006 0 SEDDSAKFDSNEEDSASVFSPSFGLK QDFGNLFSFPSYSQKSEDDSAKFDSNEEDS EEDSASVFSPSFGLKQTDKVPSKTVAAKKG K S E L K Q 2 0 1 4 0 0 3 1 0 0 1 2 0 3 1 7 0 0 0 1 0 0 26 1 2794.2093 Q02880;Q71UH4;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q02880 1457 1482 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 3 1.4399E-21 74.062 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2313 796 2509;2510 3753;3754 6037;6038 6038 1272;1273;1277 0 SEESITVSDKENETCLADQETGSK NGCNANSFEGSSTTKSEESITVSDKENETC KENETCLADQETGSKNIVSCDSNIGADKVE K S E S K N 1 0 1 2 1 1 5 1 0 1 1 2 0 0 0 4 3 0 0 1 0 0 24 1 2656.1658 A8K124;B4DHL1;A0A024R5W1;Q6N043 A8K124 786 809 SUHW4;ZNF280D Zinc finger protein 280D yes no 3 5.928E-13 50.144 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2314 75 2511 3755 6039 6039 104;1792 0 SEESPVYSNSSVR SRRISRRPSDWWVVKSEESPVYSNSSVRNE VKSEESPVYSNSSVRNELPMHHNSSRKSTK K S E V R N 0 1 1 0 0 0 2 0 0 0 0 0 0 0 1 5 0 0 1 2 0 0 13 0 1439.6529 Q03188;H0Y8J2 Q03188 535 547 CENPC Centromere protein C yes no 2 0.0001128 87.18 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2315 799 2512 3756;3757 6040;6041;6042;6043;6044 6040 1310 0 SEETNTEIVECILK STEFRNIQKLPVESKSEETNTEIVECILKR KSEETNTEIVECILKRGQKATLLQQRREGE K S E L K R 0 0 1 0 1 0 4 0 0 2 1 1 0 0 0 1 2 0 0 1 0 0 14 0 1663.7975 P46013 P46013 893 906 MKI67 Antigen KI-67 yes yes 2 2.2123E-31 141.88 1 1 0.80206 0.99536 16.304 2 Median 0.89753 1.117 NaN 1 0 Median 0.71674 0.88698 NaN 1 0 Median 45601000 24128000 21473000 19178000 9226400 9951100 26423000 14901000 11522000 2316 762 2513 3758;3759 6045;6046;6047;6048 6045 4 SEHPGLSIGDTAK SAFFLFCSEHRPKIKSEHPGLSIGDTAKKL IKSEHPGLSIGDTAKKLGEMWS________ K S E A K K 1 0 0 1 0 0 1 2 1 1 1 1 0 0 1 2 1 0 0 0 0 0 13 0 1310.6466 D6R9A6;Q5U071;P26583 D6R9A6 115 127 HMGB2 High mobility group protein B2 yes no 2 5.7881E-31 125.72 1 0.6248 0.78456 NaN 1 Median NaN NaN NaN 0 0 Median 0.6248 0.78456 NaN 1 0 Median 46146000 27465000 18681000 0 0 0 46146000 27465000 18681000 2317 593 2514 3760 6049 6049 1 SEHTAPPPEEPTDKSPEAEDPLGVER GKTYRSKAGHDYHVRSEHTAPPPEEPTDKS TDKSPEAEDPLGVERTPSGRVRRTSAQVAV R S E E R T 2 1 0 2 0 0 6 1 1 0 1 1 0 0 6 2 2 0 0 1 0 0 26 1 2813.2992 Q96KM6 Q96KM6 651 676 ZNF512B Zinc finger protein 512B yes yes 3;4 5.7451E-16 57.735 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2318 907 2515 3761;3762 6050;6051 6051 1559;2030 0 SEIPSPQSQLLEDAEANLVGR DGPEEPCAESKAMPKSEIPSPQSQLLEDAE QSQLLEDAEANLVGREAAKQQRKELAGGDF K S E G R E 2 1 1 1 0 2 3 1 0 1 3 0 0 0 2 3 0 0 0 1 0 0 21 0 2252.1285 B7ZLX4;D6W5R0;A4D1I0;Q9ULJ8 B7ZLX4 334 354 PPP1R9A;hCG_1741805 Neurabin-1 yes no 2 2.2944E-24 104.17 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2319 310 2516 3763 6052;6053 6052 462 0 SEISELRR NREVATNSELVQSGKSEISELRRTMQNLEI ELVQSGKSEISELRRTMQNLEIELQSQLSM K S E R R T 0 2 0 0 0 0 2 0 0 1 1 0 0 0 0 2 0 0 0 0 0 0 8 1 988.53016 CON__P02533;P02533;A0A024R1X6;Q14666;F5GWP8;CON__Q04695;CON__Q9QWL7;Q04695;Q13092 CON__P02533 329 336 KRT14;KRT17;K14 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 yes no 2 0.0085728 65.313 1 0.071401 0.12337 NaN 1 Median NaN NaN NaN 0 0 Median 0.071401 0.12337 NaN 1 0 Median 46792000 43425000 3367000 0 0 0 46792000 43425000 3367000 + 2320 571 2517 3764 6054 6054 1 SEITELRR TTEIDNNIEQISSYKSEITELRRNVQALEI EQISSYKSEITELRRNVQALEIELQSQLAL K S E R R N 0 2 0 0 0 0 2 0 0 1 1 0 0 0 0 1 1 0 0 0 0 0 8 1 1002.5458 CON__P13645;P13645;CON__P02535-1 CON__P13645 363 370 KRT10 Keratin, type I cytoskeletal 10 yes no 2;3 8.2766E-06 81.548 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 183370000 183370000 0 0 0 0 183370000 183370000 0 + 2321 579 2518 3765;3766 6055;6056 6056 2 SELCSSPLGK LSASPAQEKEAAPGKSELCSSPLGKRPLNE AAPGKSELCSSPLGKRPLNELMESEGKTVL K S E G K R 0 0 0 0 1 0 1 1 0 0 2 1 0 0 1 3 0 0 0 0 0 0 10 0 1076.5172 Q9Y2F5 Q9Y2F5 528 537 ICE1 Little elongation complex subunit 1 yes yes 2 0.015184 57.003 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2322 962 2519 3767;3768 6057;6058 6057 1734;1735 0 SELEREVDK RVKRVCQKEELQKQKSELEREVDKLARENA ELQKQKSELEREVDKLARENAAMRLELDAL K S E D K L 0 1 0 1 0 0 3 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 9 1 1103.5459 B0QY71;B0QY70;Q9ULX9 B0QY71 55 63 MAFF Transcription factor MafF yes no 2 0.0014301 74.376 1 1.4177 1.8793 NaN 1 Median NaN NaN NaN 0 0 Median 1.4177 1.8793 NaN 1 0 Median 8932100 3513800 5418300 0 0 0 8932100 3513800 5418300 2323 389 2520 3769 6059 6059 1 SELSQDAEPAGSQETK ILLREFEERRSLRKRSELSQDAEPAGSQET ELSQDAEPAGSQETKDSGSQEVLSELRVLS R S E T K D 2 0 0 1 0 2 3 1 0 0 1 1 0 0 1 3 1 0 0 0 0 0 16 0 1675.7537 Q9BVJ6;B4E343;X6RJY0 Q9BVJ6 434 449 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes no 2 0.00019207 56.746 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2324 919 2521 3770 6060 6060 1597 0 SENGLEFTSSGSANTETTK KGYGFGLIKLDLKTKSENGLEFTSSGSANT LEFTSSGSANTETTKVTGSLETKYRWTEYG K S E T K V 1 0 2 0 0 0 3 2 0 0 1 1 0 1 0 4 4 0 0 0 0 0 19 0 1958.8705 C9JI87;A0A1L1UHR1;P21796;B3KTS5 C9JI87 35 53 VDAC1 Voltage-dependent anion-selective channel protein 1 yes no 2 0.0067661 29.013 1 0.6806 0.83444 NaN 1 Median 0.6806 0.83444 NaN 1 0 Median NaN NaN NaN 0 0 Median 28305000 15951000 12354000 28305000 15951000 12354000 0 0 0 2325 290 2522 3771 6061;6062 6061 2 SENVDVGKPALGK APSIRRRSTRNTPAKSENVDVGKPALGKSI AKSENVDVGKPALGKSILVPNEELSMVMSS K S E G K S 1 0 1 1 0 0 1 2 0 0 1 2 0 0 1 1 0 0 0 2 0 0 13 1 1312.6987 Q8WYP5;B3KTD2;B3KVE5;B3KRD0 Q8WYP5 2017 2029 AHCTF1 Protein ELYS yes no 2 0.013792 46.592 1 0.6209 0.76084 NaN 1 Median NaN NaN NaN 0 0 Median 0.6209 0.76084 NaN 1 0 Median 8991500 4987400 4004100 0 0 0 8991500 4987400 4004100 2326 897 2523 3772 6063 6063 1 SEPHSPGIPEIFR ILNRGHSSSSSKGIKSEPHSPGIPEIFRTA IKSEPHSPGIPEIFRTASQRCRDPPSNPVA K S E F R T 0 1 0 0 0 0 2 1 1 2 0 0 0 1 3 2 0 0 0 0 0 0 13 0 1464.7361 Q8ND82;Q9UJJ2 Q8ND82 76 88 ZNF280C Zinc finger protein 280C yes no 2;3 0.00020236 78.486 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2327 887 2524 3773;3774 6064;6065 6065 1492 0 SEPSGEINIDSSGETVGSGER RNSSAFSYQRQTSNRSEPSGEINIDSSGET INIDSSGETVGSGERCVMAMLRRRIRDEKT R S E E R C 0 1 1 1 0 0 4 4 0 2 0 0 0 0 1 5 1 0 0 1 0 0 21 0 2105.9349 P42695;E9PKK4;G3V1A9 P42695 520 540 NCAPD3 Condensin-2 complex subunit D3 yes no 2 4.2423E-89 149.44 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2328 759 2525;2526 3775;3776;3777;3778 6066;6067;6068;6069;6070;6071 6067 1191;1192;1971 0 SESARGSDSEDEVLR EEHRHSDDEEEQDHKSESARGSDSEDEVLR SESARGSDSEDEVLRMKRKNAIASDSEADS K S E L R M 1 2 0 2 0 0 3 1 0 0 1 0 0 0 0 4 0 0 0 1 0 0 15 1 1635.7336 B4DNM0;Q8WVC0 B4DNM0 249 263 LEO1 RNA polymerase-associated protein LEO1 yes no 2 6.8655E-06 66.335 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2329 487 2527 3779 6072;6073 6073 715;716 0 SESDLEETEPVVIPR KKVKKRNPWSDDESKSESDLEETEPVVIPR SESDLEETEPVVIPRDSLLRRAAAERPKYT K S E P R D 0 1 0 1 0 0 4 0 0 1 1 0 0 0 2 2 1 0 0 2 0 0 15 0 1698.8312 Q02880;Q71UH4;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q02880 1342 1356 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 2 1.8423E-19 113.35 1 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2330 796 2528;2529 3780;3781;3782 6074;6075;6076;6077 6074 1278;1279 0 SESHTDLTFSR IAKRDIEQIIRNYARSESHTDLTFSRELTN NYARSESHTDLTFSRELTNDERKQIHQIAQ R S E S R E 0 1 0 1 0 0 1 0 1 0 1 0 0 1 0 3 2 0 0 0 0 0 11 0 1278.584 A2I829;Q6NUN2;A3F769;A3F768;O15226 A2I829 525 535 NKRF;NRF NF-kappa-B-repressing factor yes no 2 6.6872E-78 140.14 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2331 304 2530 3783 6078 6078 453 0 SESLIDASEDSQLEAAIR QLDGLSSSPPKKCARSESLIDASEDSQLEA LIDASEDSQLEAAIRASLQETHFDSTQTKQ R S E I R A 3 1 0 2 0 1 3 0 0 2 2 0 0 0 0 4 0 0 0 0 0 0 18 0 1932.9276 C9JAT7;B4E126;O94888 C9JAT7 116 133 UBXN7 UBX domain-containing protein 7 yes no 2 3.2923E-97 155.2 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2332 518 2531 3784;3785 6079;6080;6081;6082;6083 6079 752 0 SESPKEPEQLR ______________________________ ______________________________ K S E L R K 0 1 0 0 0 1 3 0 0 0 1 1 0 0 2 2 0 0 0 0 0 0 11 1 1298.6466 F8VTQ5;F8W646;B4DP35;B4E0B5;F8W6I7;Q6IPF2;A0A024RC46;A0A024RB53;A0A024RAZ7;P09651 F8VTQ5 4 14 HNRNPA1;HNRPA1;hCG_2020860 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 3 0.0013168 59.198 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2333 135 2532 3786 6084;6085 6084 197 0 SESPKEPEQLRK ______________________________ MSKSESPKEPEQLRKLFIGGLSFETTDESL K S E R K L 0 1 0 0 0 1 3 0 0 0 1 2 0 0 2 2 0 0 0 0 0 0 12 2 1426.7416 F8VTQ5;F8W646;B4DP35;B4E0B5;F8W6I7;Q6IPF2;A0A024RC46;A0A024RB53;A0A024RAZ7;P09651 F8VTQ5 4 15 HNRNPA1;HNRPA1;hCG_2020860 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 3 3.9442E-52 136.83 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2334 135 2533 3787;3788 6086;6087;6088;6089 6088 197 0 SESPPAELPSLR LQAKLASLRKSTKKRSESPPAELPSLRRST KKRSESPPAELPSLRRSTRQKTTGSCASTS R S E L R R 1 1 0 0 0 0 2 0 0 0 2 0 0 0 3 3 0 0 0 0 0 0 12 0 1281.6565 Q14669;H7C1L9;G5E9G6 Q14669 310 321 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 2 0.015864 42.001 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2335 814 2534 3789 6090 6090 1336;1337 0 SESPPPLSDPK ADTTTPTTSAITASRSESPPPLSDPKQAKV TASRSESPPPLSDPKQAKVVARRESGGRPI R S E P K Q 0 0 0 1 0 0 1 0 0 0 1 1 0 0 4 3 0 0 0 0 0 0 11 0 1152.5663 A0A140F1N4;A0A024R8H6;Q15059 A0A140F1N4 261 271 BRD3 Bromodomain-containing protein 3 yes no 2 0.00055147 76.165 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2336 105 2535 3790;3791 6091;6092;6093;6094;6095;6096;6097 6093 154 0 SESSTSAFSTPTR SSPERKKRILKPQLKSESSTSAFSTPTRSI LKSESSTSAFSTPTRSIPPRHNAAQINGKT K S E T R S 1 1 0 0 0 0 1 0 0 0 0 0 0 1 1 5 3 0 0 0 0 0 13 0 1356.6157 Q8WWQ0;Q9NWP3 Q8WWQ0 1471 1483 PHIP PH-interacting protein yes no 2 1.95E-06 94.551 1 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2067700 2067700 0 0 0 0 2067700 2067700 0 2337 894 2536;2537;2538 3792;3793;3794 6098;6099;6100 6098 1508;2024 1 SESVVSGLDSPAK FVGFSYSKALGILGRSESVVSGLDSPAKTS GRSESVVSGLDSPAKTSSMEKKLLIKSKEL R S E A K T 1 0 0 1 0 0 1 1 0 0 1 1 0 0 1 4 0 0 0 2 0 0 13 0 1274.6354 H7BYJ3;O14578 H7BYJ3 59 71 CIT Citron Rho-interacting kinase yes no 2 1.606E-21 106.17 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2338 671 2539 3795;3796 6101;6102;6103;6104 6101 997 0 SETAPAAPAAAPPAEK ______________________________ ETAPAAPAAAPPAEKAPVKKKAAKKAGGTP M S E E K A 7 0 0 0 0 0 2 0 0 0 0 1 0 0 4 1 1 0 0 0 0 0 16 0 1477.7413 P16403 P16403 2 17 HIST1H1C Histone H1.2 yes yes 2 1.4602E-10 98.676 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2339 739 2540;2541 3797;3798;3799;3800 6105;6106;6107;6108;6109;6110;6111;6112;6113 6109 1154;1963 0 SETAPAAPAAPAPAEKTPVK ______________________________ AAPAAPAPAEKTPVKKKARKSAGAAKRKAS M S E V K K 7 0 0 0 0 0 2 0 0 0 0 2 0 0 5 1 2 0 0 1 0 0 20 1 1903.0051 Q4VB24;B2R984;A3R0T8;A3R0T7;P10412 Q4VB24 2 21 HIST1H1E Histone H1.4 yes no 2 9.3824E-11 61.212 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2340 308 2542 3801;3802 6114;6115;6116 6114 1835 0 SETAPAETATPAPVEK ______________________________ ETAPAETATPAPVEKSPAKKKATKKAAGAG M S E E K S 4 0 0 0 0 0 3 0 0 0 0 1 0 0 3 1 3 0 0 1 0 0 16 0 1597.7835 P16401;Q14463 P16401 2 17 HIST1H1B Histone H1.5 yes no 2 9.1137E-27 118.19 4 6 0.55329 0.70877 44.909 2 Median NaN NaN NaN 0 0 Median 0.55329 0.70877 44.909 2 0 Median 24558000 14512000 10046000 0 0 0 24558000 14512000 10046000 2341 738 2543;2544;2545;2546 3803;3804;3805;3806;3807;3808;3809;3810;3811;3812 6117;6118;6119;6120;6121;6122;6123;6124;6125;6126;6127;6128;6129;6130;6131;6132;6133;6134;6135 6128 1150;1962 2 SETAPAETATPAPVEKSPAK ______________________________ AETATPAPVEKSPAKKKATKKAAGAGAAKR M S E A K K 5 0 0 0 0 0 3 0 0 0 0 2 0 0 4 2 3 0 0 1 0 0 20 1 1981.0004 P16401;Q14463 P16401 2 21 HIST1H1B Histone H1.5 yes no 2;3 1.3471E-273 204.05 9 4 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2342 738 2547;2548;2549 3813;3814;3815;3816;3817;3818;3819;3820;3821;3822;3823;3824;3825 6136;6137;6138;6139;6140;6141;6142;6143;6144;6145;6146;6147;6148;6149;6150;6151;6152;6153;6154;6155;6156;6157;6158;6159;6160;6161;6162;6163 6141 1150;1151;1962 0 SETAPAETATPAPVEKSPAKK ______________________________ ETATPAPVEKSPAKKKATKKAAGAGAAKRK M S E K K K 5 0 0 0 0 0 3 0 0 0 0 3 0 0 4 2 3 0 0 1 0 0 21 2 2109.0954 P16401;Q14463 P16401 2 22 HIST1H1B Histone H1.5 yes no 2;3 0 215.65 9 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2343 738 2550;2551;2552 3826;3827;3828;3829;3830;3831;3832;3833;3834;3835;3836;3837 6164;6165;6166;6167;6168;6169;6170;6171;6172;6173;6174;6175;6176;6177;6178;6179;6180;6181;6182;6183;6184;6185;6186;6187;6188 6175 1150;1151;1962 0 SETAPAETATPAPVEKSPAKKK ______________________________ TATPAPVEKSPAKKKATKKAAGAGAAKRKA M S E K K A 5 0 0 0 0 0 3 0 0 0 0 4 0 0 4 2 3 0 0 1 0 0 22 3 2237.1903 P16401;Q14463 P16401 2 23 HIST1H1B Histone H1.5 yes no 3 1.4725E-09 49.618 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2344 738 2553 3838 6189 6189 1150;1151;1962 0 SEVLAEESIVCLQK ______________________________ RSEVLAEESIVCLQKALNHLREIWELIGIP R S E Q K A 1 0 0 0 1 1 3 0 0 1 2 1 0 0 0 2 0 0 0 2 0 0 14 0 1603.8127 H0YLA0;H0YM42;A0A024RC67;O43663 H0YLA0 4 17 PRC1 Protein regulator of cytokinesis 1 yes no 2 0.0001935 67.93 1 0.39854 0.50091 NaN 1 Median NaN NaN NaN 0 0 Median 0.39854 0.50091 NaN 1 0 Median 8700300 5885000 2815300 0 0 0 8700300 5885000 2815300 2345 153 2554 3839 6190;6191 6191 2 SEVQQPVHPKPLSPDSR RSTPAEDDSRDSQVKSEVQQPVHPKPLSPD VQQPVHPKPLSPDSRASSLSESSPPKAMKK K S E S R A 0 1 0 1 0 2 1 0 1 0 1 1 0 0 4 3 0 0 0 2 0 0 17 1 1899.9803 B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2;F8VQE1;F8VRN8 B4DN52 269 285 LIMA1 LIM domain and actin-binding protein 1 yes no 3;4 7.2779E-92 151.86 3 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2346 485 2555;2556 3840;3841;3842;3843 6192;6193;6194;6195;6196;6197;6198;6199 6194 704;705 0 SEVTELRR NKEVASNSELVQSSRSEVTELRRVLQGLEI ELVQSSRSEVTELRRVLQGLEIELQSQLSM R S E R R V 0 2 0 0 0 0 2 0 0 0 1 0 0 0 0 1 1 0 0 1 0 0 8 1 988.53016 CON__P08779;P08779;K7ENW6;Q16195 CON__P08779 331 338 KRT16;keratin Keratin, type I cytoskeletal 16 yes no 2 0.0041199 62.464 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 8096700 8096700 0 0 0 0 8096700 8096700 0 + 2347 577 2557 3844 6200 6200 1 SFATASHR DYRQFRKSVLADQGKSFATASHRNTEEEGL VLADQGKSFATASHRNTEEEGLKYKSKVSL K S F H R N 2 1 0 0 0 0 0 0 1 0 0 0 0 1 0 2 1 0 0 0 0 0 8 0 875.42496 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 Q6DCA8 422 429 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 0.0081369 57.177 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3599800 3599800 0 0 0 0 3599800 3599800 0 2348 622 2558 3845 6201 6201 1 SFDASDTLALPR SILEPPHRYHIHRRKSFDASDTLALPRHCL RRKSFDASDTLALPRHCLLGWDIFPPKSEK K S F P R H 2 1 0 2 0 0 0 0 0 0 2 0 0 1 1 2 1 0 0 0 0 0 12 0 1291.6408 Q5JXC2 Q5JXC2 303 314 MIIP Migration and invasion-inhibitory protein yes yes 2 0.00013073 71.176 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2349 841 2559 3846 6202 6202 1389 0 SFDEQNVPK LSVAAKRLLFREMEKSFDEQNVPKRRSRNT FREMEKSFDEQNVPKRRSRNTAVEQRLRRL K S F P K R 0 0 1 1 0 1 1 0 0 0 0 1 0 1 1 1 0 0 0 1 0 0 9 0 1062.4982 O95425 O95425 707 715 SVIL Supervillin yes yes 2 0.010878 41.54 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2350 719 2560 3847 6203 6203 1101 0 SFDFEIETK EISFVNFARGTTTTRSFDFEIETKQGTQYT GTTTTRSFDFEIETKQGTQYTFSSIEREEY R S F T K Q 0 0 0 1 0 0 2 0 0 1 0 1 0 2 0 1 1 0 0 0 0 0 9 0 1114.5183 A0A024R4Z6;Q08945 A0A024R4Z6 388 396 SSRP1 FACT complex subunit SSRP1 yes no 2 0.00092664 76.221 1 1.1483 1.4977 NaN 1 Median NaN NaN NaN 0 0 Median 1.1483 1.4977 NaN 1 0 Median 15947000 6891600 9055200 0 0 0 15947000 6891600 9055200 2351 65 2561 3848 6204 6204 1 SFEDPPNHARSPGNK PNRFYFLEAYNAKSKSFEDPPNHARSPGNK SFEDPPNHARSPGNKGKGKGKGKGKPKSQA K S F N K G 1 1 2 1 0 0 1 1 1 0 0 1 0 1 3 2 0 0 0 0 0 0 15 1 1651.7703 Q59FP7;A0A024R7E3;P26358;I6L9H2;B3KVA0 Q59FP7 1082 1096 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 yes no 3 0.00023087 51.819 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2352 91 2562 3849 6205 6205 127 0 SFGSTCQLSEK TFDSQTKENMTLQPKSFGSTCQLSEKFIKA LQPKSFGSTCQLSEKFIKAAIGCGIVESIL K S F E K F 0 0 0 0 1 1 1 1 0 0 1 1 0 1 0 3 1 0 0 0 0 0 11 0 1242.5551 P11388 P11388 387 397 TOP2A DNA topoisomerase 2-alpha yes yes 2 0.0098854 51.436 1 0.57648 0.73302 NaN 1 Median NaN NaN NaN 0 0 Median 0.57648 0.73302 NaN 1 0 Median 7676700 5060300 2616400 0 0 0 7676700 5060300 2616400 2353 734 2563 3850 6206;6207 6207 2 SFHTYDVQK SALKRRFYVTTCVGKSFHTYDVQKLSLVAV TTCVGKSFHTYDVQKLSLVAVSNSVPQDIC K S F Q K L 0 0 0 1 0 1 0 0 1 0 0 1 0 1 0 1 1 0 1 1 0 0 9 0 1123.5298 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 49 57 WDR36 WD repeat-containing protein 36 yes no 2 0.0011517 83.313 1 0.58289 0.76849 NaN 1 Median NaN NaN NaN 0 0 Median 0.58289 0.76849 NaN 1 0 Median 14610000 8597700 6012100 0 0 0 14610000 8597700 6012100 2354 225 2564 3851 6208;6209 6209 2 SFISPIPSK DHSSQNPLIMRRRVRSFISPIPSKRQSQDV MRRRVRSFISPIPSKRQSQDVKNSSTEDKG R S F S K R 0 0 0 0 0 0 0 0 0 2 0 1 0 1 2 3 0 0 0 0 0 0 9 0 974.54368 W5ZR30;Q9UGU0 W5ZR30 1259 1267 TCF20 Transcription factor 20 yes no 2 0.0034374 54.471 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2355 949 2565 3852;3853 6210;6211;6212 6210 1694 0 SFLSEPSSPGR ______________________________ ELERSFLSEPSSPGRTKTTKGFKLGKHKHE R S F G R T 0 1 0 0 0 0 1 1 0 0 1 0 0 1 2 4 0 0 0 0 0 0 11 0 1162.5619 H0YC41;Q69YN4 H0YC41 5 15 KIAA1429 Protein virilizer homolog yes no 2 0.00151 66.262 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2356 653 2566 3854;3855 6213;6214;6215 6213 981;982 0 SFLVIVDGSPK LRRHTSIHDKNTPWKSFLVIVDGSPKNDDG TPWKSFLVIVDGSPKNDDGHKTEQPDEEYV K S F P K N 0 0 0 1 0 0 0 1 0 1 1 1 0 1 1 2 0 0 0 2 0 0 11 0 1160.6441 B4DI14;Q9H116 B4DI14 129 139 GZF1 GDNF-inducible zinc finger protein 1 yes no 2 0.00020226 90.731 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2357 467 2567 3856 6216;6217 6217 675 0 SFQSDDSSLR KLQHTYLCEEKENNKSFQSDDSSLRASVQG KENNKSFQSDDSSLRASVQGVPLESSNNDI K S F L R A 0 1 0 2 0 1 0 0 0 0 1 0 0 1 0 4 0 0 0 0 0 0 10 0 1140.5047 Q6P0N0;G5E9K5 Q6P0N0 172 181 MIS18BP1 Mis18-binding protein 1 yes no 2 0.0032057 53.569 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2358 858 2568 3857 6218 6218 1424 0 SFSADNFIGIQR RLCEDKDLCRAAMRRSFSADNFIGIQRSKA MRRSFSADNFIGIQRSKAILS_________ R S F Q R S 1 1 1 1 0 1 0 1 0 2 0 0 0 2 0 2 0 0 0 0 0 0 12 0 1353.6677 Q8N7R7 Q8N7R7 342 353 CCNYL1 Cyclin-Y-like protein 1 yes yes 2 0.014275 45.115 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2359 880 2569 3858 6219 6219 1483 0 SFSASQSTDREGASPVTEVR ALDDRPQVLQPHRLRSFSASQSTDREGASP QSTDREGASPVTEVRIKTEPSSPLSDPSDI R S F V R I 2 2 0 1 0 1 2 1 0 0 0 0 0 1 1 5 2 0 0 2 0 0 20 1 2109.9927 Q5H9S0;B4DTN6;Q9ULJ3 Q5H9S0 409 428 DKFZp781N1974;ZBTB21 Zinc finger and BTB domain-containing protein 21 yes no 3 1.4973E-10 58.92 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2360 499 2570 3859 6220 6220 736 0 SFSISPVR TPSRRRRSRSVVRRRSFSISPVRLRRSRTP RSVVRRRSFSISPVRLRRSRTPLRRRFSRS R S F V R L 0 1 0 0 0 0 0 0 0 1 0 0 0 1 1 3 0 0 0 1 0 0 8 0 891.48142 P18583;H7C1M2;H7C2G8 P18583 2009 2016 SON Protein SON yes no 2 0.0021024 81.972 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2361 743 2571;2572 3860;3861 6221;6222 6222 1160;1161 0 SFSKEELMSSDLEETAGSTSIPK MEDPSISFSKPKKKKSFSKEELMSSDLEET SSDLEETAGSTSIPKRKKSTPKEETVNDPE K S F P K R 1 0 0 1 0 0 4 1 0 1 2 2 1 1 1 6 2 0 0 0 0 0 23 1 2472.1578 A8K9K6;O00567;Q9BSN3 A8K9K6 511 533 NOP56 Nucleolar protein 56 yes no 3 1.3689E-16 75.797 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2362 379 2573;2574 3862;3863 6223;6224 6223 76 575;576;577 0 SFTASVDRK KYTLLLGQDENSVIKSFTASVDRKFISLMS ENSVIKSFTASVDRKFISLMSLSSDGCIYE K S F R K F 1 1 0 1 0 0 0 0 0 0 0 1 0 1 0 2 1 0 0 1 0 0 9 1 1009.5193 J3QR28;Q9H8H0 J3QR28 78 86 NOL11 Nucleolar protein 11 yes no 2 0.013599 47.603 1 0.5354 0.73176 NaN 1 Median NaN NaN NaN 0 0 Median 0.5354 0.73176 NaN 1 0 Median 12226000 7896800 4329100 0 0 0 12226000 7896800 4329100 2363 685 2575 3864 6225;6226 6225 2 SFTPDHVVYAR ERREKLKTSRDKLRKSFTPDHVVYARSKTA KLRKSFTPDHVVYARSKTAVYKVPPFTFHV K S F A R S 1 1 0 1 0 0 0 0 1 0 0 0 0 1 1 1 1 0 1 2 0 0 11 0 1290.6357 B3KRY5;B4DPZ5;B4DNU9;Q6NZI2 B3KRY5 255 265 PTRF Polymerase I and transcript release factor yes no 2 0.0018247 69.954 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2364 442 2576;2577 3865;3866 6227;6228 6227 645;1877 0 SFYQFQHYR LLRVEEINPEYMLEKSFYQFQHYRAIPGVV EYMLEKSFYQFQHYRAIPGVVEKVKNSEEQ K S F Y R A 0 1 0 0 0 2 0 0 1 0 0 0 0 2 0 1 0 0 2 0 0 0 9 0 1274.5833 B4E3M6;P42285;A8K6I4 B4E3M6 487 495 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes no 2 4.1497E-08 114.6 1 0.35285 0.47255 NaN 1 Median NaN NaN NaN 0 0 Median 0.35285 0.47255 NaN 1 0 Median 9497300 6461000 3036400 0 0 0 9497300 6461000 3036400 2365 524 2578 3867 6229 6229 1 SGAQASSTPLSPTR ______________________________ RSGAQASSTPLSPTRITRLQEKEDLQELND R S G T R I 2 1 0 0 0 1 0 1 0 0 1 0 0 0 2 4 2 0 0 0 0 0 14 0 1358.679 P02545;W8QEH3;Q5I6Y5;Q8N519;Q3BDU5;W5X314 P02545 12 25 LMNA Prelamin-A/C;Lamin-A/C yes no 2 2.0996E-07 97.797 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2366 725 2579 3868;3869 6230;6231;6232 6230 1114 0 SGASAAPAASAAAALAPSATR RSRSSAAAKLRGQKRSGASAAPAASAAAAL PAASAAAALAPSATRTRRSASQAGSKSQAV R S G T R T 11 1 0 0 0 0 0 1 0 0 1 0 0 0 2 4 1 0 0 0 0 0 21 0 1768.9068 A0A0M3HER2 A0A0M3HER2 18 38 yes yes 2 1.1777E-09 52.823 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2367 260 2580 3870 6233;6234 6234 356 0 SGASEANLIVAK RSQHDILQMICSKRRSGASEANLIVAKSWA KRRSGASEANLIVAKSWADVVKLGAKQTQT R S G A K S 3 0 1 0 0 0 1 1 0 1 1 1 0 0 0 2 0 0 0 1 0 0 12 0 1158.6245 P46013;Q70L73 P46013 648 659 MKI67 Antigen KI-67 no no 2 0.008278 57.348 1 1 1.0862 1.2938 11.344 2 Median 1.047 1.1941 NaN 1 0 Median 1.1268 1.4019 NaN 1 0 Median 11564000 6053200 5511200 1840000 870210 969790 9724400 5183000 4541400 2368 762;865 2581 3871;3872 6235;6236;6237 6237 2 SGASVVAIRK MDAILTEAIKACFQKSGASVVAIRKYIIHK ACFQKSGASVVAIRKYIIHKYPSLELERRG K S G R K Y 2 1 0 0 0 0 0 1 0 1 0 1 0 0 0 2 0 0 0 2 0 0 10 1 986.58728 Q5SSJ5;X6RGJ2;B0QZK4;Q5SWC8 Q5SSJ5 176 185 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 2 0.0075158 46.334 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 6191200 6191200 0 0 0 0 6191200 6191200 0 2369 842 2582 3873;3874 6238;6239 6239 2 SGDHLHNDSQIEADFR ______________________________ GDHLHNDSQIEADFRLNDSHKHKDKHKDRE M S G F R L 1 1 1 3 0 1 1 1 2 1 1 0 0 1 0 2 0 0 0 0 0 0 16 0 1839.8136 P11387;B9EG90;Q6PK95;Q6NWZ5 P11387 2 17 TOP1 DNA topoisomerase 1 yes no 2;3 1.2335E-74 149.52 4 4 0.77246 1.1101 NaN 1 Median NaN NaN NaN 0 0 Median 0.77246 1.1101 NaN 1 0 Median 182920000 105000000 77922000 0 0 0 182920000 105000000 77922000 2370 733 2583;2584;2585 3875;3876;3877;3878;3879;3880;3881;3882 6240;6241;6242;6243;6244;6245;6246;6247;6248;6249;6250;6251;6252;6253;6254 6240 1133;1134 1 SGEDEQQEQTIAEDLVVTK ______________________________ EQQEQTIAEDLVVTKYKMGGDIANRVLRSL M S G T K Y 1 0 0 2 0 3 4 1 0 1 1 1 0 0 0 1 2 0 0 2 0 0 19 0 2117.9964 F8VR77;A8K6Y1;Q6PIN5;A0A024RB85;Q9UQ80 F8VR77 2 20 PA2G4 Proliferation-associated protein 2G4 yes no 2 3.9137E-08 62.203 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2371 138 2586 3883 6255;6256 6255 200 0 SGFGEISSPVIR ______________________________ MDRSGFGEISSPVIREAEVTRTARKQSAQK R S G I R E 0 1 0 0 0 0 1 2 0 2 0 0 0 1 1 3 0 0 0 1 0 0 12 0 1247.651 G3V1T4;P57740 G3V1T4 4 15 NUP107 Nuclear pore complex protein Nup107 yes no 2 0.00013073 73.466 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2372 641 2587 3884 6257;6258 6257 973 0 SGGGGGGGLGSGGSIR ______________________________ GGGGGGGLGSGGSIRSSYSRFSSSGGRGGG R S G I R S 0 1 0 0 0 0 0 10 0 1 1 0 0 0 0 3 0 0 0 0 0 0 16 0 1231.5905 CON__P35527;P35527 CON__P35527 14 29 KRT9 Keratin, type I cytoskeletal 9 yes no 2 6.154E-18 85.536 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 14404000 14404000 0 0 0 0 14404000 14404000 0 + 2373 582 2588 3885 6259 6259 1 SGGNEVSIEER KPAPPQTEQVESKRKSGGNEVSIEERLGAM SKRKSGGNEVSIEERLGAMDIDTHKKGKED K S G E R L 0 1 1 0 0 0 3 2 0 1 0 0 0 0 0 2 0 0 0 1 0 0 11 0 1175.5418 Q15061 Q15061 431 441 WDR43 WD repeat-containing protein 43 yes yes 2 1.747E-13 109 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2374 821 2589 3886 6260 6260 1353 0 SGGSGHAVAEPASPEQELDQNK QGETQLLVSRKSRPKSGGSGHAVAEPASPE VAEPASPEQELDQNKGKGRDVESVQTPSKA K S G N K G 3 0 1 1 0 2 3 3 1 0 1 1 0 0 2 3 0 0 0 1 0 0 22 0 2207.0091 P46013 P46013 296 317 MKI67 Antigen KI-67 yes yes 2;3 0 227.25 3 4 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2375 762 2590 3887;3888;3889;3890;3891;3892;3893 6261;6262;6263;6264;6265;6266;6267;6268;6269;6270;6271;6272;6273;6274;6275;6276;6277;6278;6279;6280 6266 1225 0 SGHFEQAIK LLSKHRAFEDEMSGRSGHFEQAIKEGEDMI DEMSGRSGHFEQAIKEGEDMIAEEHFGSEK R S G I K E 1 0 0 0 0 1 1 1 1 1 0 1 0 1 0 1 0 0 0 0 0 0 9 0 1015.5087 D6W5C0;K9MS24;B2ZZ89;A0A087WUZ3;Q01082 D6W5C0 605 613 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 2 0.020305 45.368 1 3.0007 3.9511 NaN 1 Median NaN NaN NaN 0 0 Median 3.0007 3.9511 NaN 1 0 Median 4056300 1170800 2885400 0 0 0 4056300 1170800 2885400 2376 185 2591 3894 6281 6281 1 SGLNGSILAEREEPLR PQLEFAQYKLETKFKSGLNGSILAEREEPL GLNGSILAEREEPLRCLIKFSSPHLLEALK K S G L R C 1 2 1 0 0 0 3 2 0 1 3 0 0 0 1 2 0 0 0 0 0 0 16 1 1739.9166 Q96H22 Q96H22 277 292 CENPN Centromere protein N yes yes 3 1.6733E-07 84.581 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2377 902 2592 3895;3896 6282;6283 6282 1542 0 SGQSALYDALFSSQSPK KQDFLKEIVETFANKSGQSALYDALFSSQS QSALYDALFSSQSPKDTSFLGSDDIGNIDV K S G P K D 2 0 0 1 0 2 0 1 0 0 2 1 0 1 1 5 0 0 1 0 0 0 17 0 1784.8581 P49792;D3DX73;B4DZH4;J3KNE0;Q7Z3J3;A6NKT7 P49792 380 396 RANBP2;hCG_1994636;RGPD3;RGPD4 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3 yes no 2 1.8525E-05 53.536 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2378 769 2593 3897;3898 6284;6285 6285 1244;1245;1246 0 SGTLACTGSLVNNTANDRK DGRRDIIRAVGAYSKSGTLACTGSLVNNTA ACTGSLVNNTANDRKMYFLTAHHCGMGTAS K S G R K M 2 1 3 1 1 0 0 2 0 0 2 1 0 0 0 2 3 0 0 1 0 0 19 1 1977.9538 CON__P15636 CON__P15636 236 254 yes yes 3 2.6705E-08 46.514 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 7569200 7569200 0 0 0 0 7569200 7569200 0 + 2379 581 2594 3899 6286 6286 1 SGTSSPQSPVFR ALAGGVTLGLAIEPKSGTSSPQSPVFRHRT EPKSGTSSPQSPVFRHRTLENSPISSCDTS K S G F R H 0 1 0 0 0 1 0 1 0 0 0 0 0 1 2 4 1 0 0 1 0 0 12 0 1248.6099 Q6ZRV0;Q8N556 Q6ZRV0 344 355 AFAP1 Actin filament-associated protein 1 yes no 2 0.00012824 90.861 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2380 864 2595 3900 6287;6288;6289 6288 1435;1436 0 SGVSLAALK VSELITKVVAASKERSGVSLAALKKALAAA AASKERSGVSLAALKKALAAAGYDVEKNNS R S G L K K 2 0 0 0 0 0 0 1 0 0 2 1 0 0 0 2 0 0 0 1 0 0 9 0 844.50182 P16403;Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402 Q4VB24 55 63 HIST1H1C;HIST1H1E;HIST1H1D Histone H1.2;Histone H1.4;Histone H1.3 no no 2 0.0012572 84.743 4 0.73422 0.97688 14.045 4 Linear NaN NaN NaN 0 0 Median 0.73422 0.97688 14.045 4 0 Linear 48627000 28854000 19772000 0 0 0 48627000 28854000 19772000 2381 308;739 2596 3901;3902;3903;3904 6290;6291;6292;6293;6294;6295;6296;6297;6298 6297 9 SGVSLAALKK VSELITKVVAASKERSGVSLAALKKALAAA ASKERSGVSLAALKKALAAAGYDVEKNNSR R S G K K A 2 0 0 0 0 0 0 1 0 0 2 2 0 0 0 2 0 0 0 1 0 0 10 1 972.59678 P16403;Q4VB24;B2R984;A3R0T8;A3R0T7;P10412;P16402 Q4VB24 55 64 HIST1H1C;HIST1H1E;HIST1H1D Histone H1.2;Histone H1.4;Histone H1.3 no no 2 3.3523E-20 120.15 1 1 0.73922 0.89451 12.961 2 Median 0.8061 0.98037 NaN 1 0 Median 0.67788 0.81617 NaN 1 0 Median 60765000 37544000 23221000 6450100 3589000 2861100 54315000 33955000 20360000 2382 308;739 2597 3905;3906 6299;6300;6301 6300 3 SHDDGNIDLESDSFLK KKYKRQPEESESKTKSHDDGNIDLESDSFL HDDGNIDLESDSFLKFDSEPSAVALELPTR K S H L K F 0 0 1 4 0 0 1 1 1 1 2 1 0 1 0 3 0 0 0 0 0 0 16 0 1790.7959 P18583;D3DSF7 P18583 142 157 SON Protein SON yes no 2 8.9572E-07 77.324 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2383 743 2598 3907 6302 6302 1162 0 SHEGETAYIR DMTYAVRKLDNTKFRSHEGETAYIRVKVDG NTKFRSHEGETAYIRVKVDGPRSPSYGRSR R S H I R V 1 1 0 0 0 0 2 1 1 1 0 0 0 0 0 1 1 0 1 0 0 0 10 0 1161.5415 J3KSR8;B7Z570;A8K1L8;J3KTL2;Q07955 J3KSR8 77 86 SRSF1 Serine/arginine-rich splicing factor 1 yes no 2 8.3771E-05 93.598 1 1 0.62664 0.82863 44.516 2 Median 0.4783 0.60486 NaN 1 0 Median 0.82099 1.1352 NaN 1 0 Median 62323000 35331000 26992000 4544300 3272600 1271700 57779000 32058000 25721000 2384 340 2599 3908;3909 6303;6304;6305 6304 3 SHEGETSYIR DMEYALRKLDDTKFRSHEGETSYIRVYPER DTKFRSHEGETSYIRVYPERSTSYGYSRSR R S H I R V 0 1 0 0 0 0 2 1 1 1 0 0 0 0 0 2 1 0 1 0 0 0 10 0 1177.5364 A8K3M9;Q13242 A8K3M9 172 181 SRSF9 Serine/arginine-rich splicing factor 9 yes no 2 0.0022348 68.016 1 1.1666 1.5313 NaN 1 Median NaN NaN NaN 0 0 Median 1.1666 1.5313 NaN 1 0 Median 12111000 5047200 7063800 0 0 0 12111000 5047200 7063800 2385 348 2600 3910 6306 6306 1 SHGIDLDHNR SGKKKTFKDVGNLLRSHGIDLDHNRFLILQ GNLLRSHGIDLDHNRFLILQGEVEQIAMMK R S H N R F 0 1 1 2 0 0 0 1 2 1 1 0 0 0 0 1 0 0 0 0 0 0 10 0 1162.5479 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83;C9JVD8;C9J578;C9J9E4 Q9NTJ3 215 224 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 2;3 0.0011137 64.374 2 1 0.70106 0.85399 10.347 3 Median 0.7507 0.93227 12.402 2 0 Median 0.64517 0.84767 NaN 1 0 Median 155660000 90684000 64976000 143660000 83359000 60302000 12000000 7325000 4674600 2386 941 2601 3911;3912;3913 6307;6308;6309;6310;6311;6312;6313 6308 7 SHISDQSPLSSK CGREKSGIQPLCPERSHISDQSPLSSKRKA PERSHISDQSPLSSKRKALEESESSQLISP R S H S K R 0 0 0 1 0 1 0 0 1 1 1 1 0 0 1 5 0 0 0 0 0 0 12 0 1284.631 P42166 P42166 345 356 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 2 0.0028963 56.122 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2387 757 2602 3914;3915 6314;6315;6316 6314 1187 0 SHLFFTAGK FAHDDSVMYLQFVPKSHLFFTAGKDHKIKQ LQFVPKSHLFFTAGKDHKIKQWDADKFEHI K S H G K D 1 0 0 0 0 0 0 1 1 0 1 1 0 2 0 1 1 0 0 0 0 0 9 0 1006.5236 Q5TDG3;Q9UNX4;Q59GA8;B3KMW5 Q5TDG3 645 653 WDR3 WD repeat-containing protein 3 yes no 2 0.013438 47.96 1 0.65126 0.86868 NaN 1 Median NaN NaN NaN 0 0 Median 0.65126 0.86868 NaN 1 0 Median 5490400 3320900 2169500 0 0 0 5490400 3320900 2169500 2388 848 2603 3916 6317 6317 1 SHLLSSSDAEGNYRDSLETLPSTK VIMEDFNERNSSETKSHLLSSSDAEGNYRD EGNYRDSLETLPSTKESDSTQTTTPSASCP K S H T K E 1 1 1 2 0 0 2 1 1 0 4 1 0 0 1 6 2 0 1 0 0 0 24 1 2606.246 F5GXF5;E7ETD6;Q12830 F5GXF5 1548 1571 BPTF Nucleosome-remodeling factor subunit BPTF yes no 3 2.9904E-23 80.752 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2389 607 2604 3917 6318;6319 6319 910 0 SHPELENVK HDSQETAEKEVKRKRSHPELENVKISETTG EVKRKRSHPELENVKISETTGNSKFRPDTS R S H V K I 0 0 1 0 0 0 2 0 1 0 1 1 0 0 1 1 0 0 0 1 0 0 9 0 1051.5298 Q9NSI6 Q9NSI6 2131 2139 BRWD1 Bromodomain and WD repeat-containing protein 1 yes yes 2 0.0003221 78.903 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2390 938 2605 3918;3919 6320;6321 6321 1666 0 SHRDSEDI KKAEDNVCVKKIRTRSHRDSEDI_______ VKKIRTRSHRDSEDI_______________ R S H D I - 0 1 0 2 0 0 1 0 1 1 0 0 0 0 0 2 0 0 0 0 0 0 8 1 957.41519 P46013;B4DRH3 P46013 3249 3256 MKI67 Antigen KI-67 yes no 2 0.021366 58.596 1 0.90662 1.2395 NaN 1 Median NaN NaN NaN 0 0 Median 0.90662 1.2395 NaN 1 0 Median 41290000 20781000 20509000 0 0 0 41290000 20781000 20509000 2391 762 2606 3920 6322;6323 6323 2 SHSAPSEVGFSDAR ERNSHAPPAETIRWKSHSAPSEVGFSDARH KSHSAPSEVGFSDARHVTVRNAWKSRRDLK K S H A R H 2 1 0 1 0 0 1 1 1 0 0 0 0 1 1 4 0 0 0 1 0 0 14 0 1445.6535 A0A024RAC0;Q86V48 A0A024RAC0 903 916 LUZP1 Leucine zipper protein 1 yes no 2 0.0013243 54.09 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2392 127 2607 3921 6324 6324 183 0 SHSVFNIK KRRIANTHLNRESSRSHSVFNIKLVQAPLD LNRESSRSHSVFNIKLVQAPLDADGDNVLQ R S H I K L 0 0 1 0 0 0 0 0 1 1 0 1 0 1 0 2 0 0 0 1 0 0 8 0 930.49232 H7BYN4;Q02241;H0YKQ5;H0YME6 H7BYN4 301 308 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 yes no 2 3.1446E-181 193.96 1 1.0369 1.2913 NaN 1 Median NaN NaN NaN 0 0 Median 1.0369 1.2913 NaN 1 0 Median 32406000 17051000 15355000 0 0 0 32406000 17051000 15355000 2393 672 2608 3922 6325 6325 1 SHTVAIDNQIFK EKTIYSGEENMDITKSHTVAIDNQIFKQDQ ITKSHTVAIDNQIFKQDQSNVQIAAAPTPE K S H F K Q 1 0 1 1 0 1 0 0 1 2 0 1 0 1 0 1 1 0 0 1 0 0 12 0 1371.7147 E9PPJ1;Q8NG31 E9PPJ1 489 500 CASC5 Protein CASC5 yes no 2 3.5123E-139 178.84 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2394 627 2609 3923 6326;6327 6327 1930 0 SHVEDGDIAGAPASSPEAPPAEQDPVQLK SDELALVRQQLSEMKSHVEDGDIAGAPASS SPEAPPAEQDPVQLKTQLEWTEAILEDEQT K S H L K T 5 0 0 3 0 2 3 2 1 1 1 1 0 0 5 3 0 0 0 2 0 0 29 0 2911.3836 A1A5C4;A0A087WVV2;A0A0A0MRV0;A7BI36;Q9P2E9;B3KSG1;A0A087WU26;F8W7S5;A1A5C5 A1A5C4 787 815 RRBP1 Ribosome-binding protein 1 yes no 3 6.2976E-25 65.801 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2395 189 2610 3924 6328 6328 269;270 0 SIAFPSIGSGR TVKNCLALADDKKLKSIAFPSIGSGRNGFP KKLKSIAFPSIGSGRNGFPKQTAAQLILKA K S I G R N 1 1 0 0 0 0 0 2 0 2 0 0 0 1 1 3 0 0 0 0 0 0 11 0 1090.5771 O75367;Q59FH0;B4DJC3 O75367 308 318 H2AFY Core histone macro-H2A.1;Histone H2A yes no 2 0.010342 46.819 1 0.72268 0.92955 NaN 1 Median NaN NaN NaN 0 0 Median 0.72268 0.92955 NaN 1 0 Median 15141000 9153500 5987600 0 0 0 15141000 9153500 5987600 2396 709 2611 3925 6329 6329 1 SIDISATIPK FSTDSPRLLASPSSRSIDISATIPKFTNTQ SPSSRSIDISATIPKFTNTQITEHYSTCIK R S I P K F 1 0 0 1 0 0 0 0 0 3 0 1 0 0 1 2 1 0 0 0 0 0 10 0 1043.5863 B4DRG7;E9PHA2;A8K4T8;Q15003;C9J470;C9JZP1 B4DRG7 68 77 NCAPH Condensin complex subunit 2 yes no 1;2 3.4648E-05 91.937 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2397 354 2612 3926;3927;3928;3929 6330;6331;6332;6333;6334;6335 6333 541;542 0 SIGAASPRPQSLEK PLERPLGTADPRLDKSIGAASPRPQSLEKT KSIGAASPRPQSLEKTSVPTGLRLPPPDRL K S I E K T 2 1 0 0 0 1 1 1 0 1 1 1 0 0 2 3 0 0 0 0 0 0 14 1 1439.7732 B2RWP5;Q96L73;Q658U6;Q9H6B5;A0A1D8GZ55;A0A1D8GZ56;Q9H6H8 B2RWP5 2095 2108 NSD1;DKFZp666C163 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific yes no 2 6.1075E-07 91.657 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2398 422 2613;2614 3930;3931 6336;6337;6338 6336 624;625 0 SIHFSSPVFTSR ______________________________ ______________________________ M S I S R S 0 1 0 0 0 0 0 0 1 1 0 0 0 2 1 4 1 0 0 1 0 0 12 0 1363.6884 CON__P08729;B3KY79;CON__Q3KNV1;P08729 CON__P08729 2 13 KRT7 Keratin, type II cytoskeletal 7 yes no 2 0.00067727 65.043 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 + 2399 576 2615 3932 6339;6340 6340 861;862 0 SILAKPSSSPDPR QDVPKPVLTSVMVPKSILAKPSSSPDPRYL PKSILAKPSSSPDPRYLSVPPSPNISTSES K S I P R Y 1 1 0 1 0 0 0 0 0 1 1 1 0 0 3 4 0 0 0 0 0 0 13 1 1353.7252 Q9BTC0 Q9BTC0 1011 1023 DIDO1 Death-inducer obliterator 1 yes yes 2 1.4406E-41 134.61 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2400 916 2616 3933;3934 6341;6342;6343;6344;6345;6346;6347;6348 6343 1582;1583;1584 0 SILPYPVSPK NRQATFSGRTKSSYKSILPYPVSPKQKYSH KSSYKSILPYPVSPKQKYSHVILGDKVTKN K S I P K Q 0 0 0 0 0 0 0 0 0 1 1 1 0 0 3 2 0 0 1 1 0 0 10 0 1099.6277 B9EGR5;Q8IWI9;Q9H6M4;H3BP52;H3BTF4 B9EGR5 917 926 MGA MAX gene-associated protein yes no 2 0.006595 44.299 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2401 555 2617 3935 6349 6349 832 0 SILSPGGSCGPIK KKHVGGRVMVTDADRSILSPGGSCGPIKVK DRSILSPGGSCGPIKVKTEPTEDSGISLEM R S I I K V 0 0 0 0 1 0 0 3 0 2 1 1 0 0 2 3 0 0 0 0 0 0 13 0 1271.6544 X5D7Q9;X5D2J9;Q499G6;X5D939;X5DNP5;A8K9W7;B4DH52;X5DR09;P78347 X5D7Q9 207 219 GTF2I General transcription factor II-I yes no 2 0.0013773 59.185 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2402 381 2618 3936 6350;6351 6350 583 0 SILVSPTGPSR GLNRNMTAEFKKTDKSILVSPTGPSRVAFD KTDKSILVSPTGPSRVAFDPEQKPLHGVLK K S I S R V 0 1 0 0 0 0 0 1 0 1 1 0 0 0 2 3 1 0 0 1 0 0 11 0 1112.619 Q14684 Q14684 702 712 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 2 3.5735E-05 92.925 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2403 815 2619 3937;3938 6352;6353;6354;6355;6356;6357;6358;6359 6357 1339 0 SIPALQSSDSGDLGK PSSEVAKPSEKNSNKSIPALQSSDSGDLGK SIPALQSSDSGDLGKWQDKITVKAGDDTPV K S I G K W 1 0 0 2 0 1 0 2 0 1 2 1 0 0 1 4 0 0 0 0 0 0 15 0 1473.7311 Q9UHF7;H0YC29;E5RJ97;E5RFF3 Q9UHF7 382 396 TRPS1 Zinc finger transcription factor Trps1 yes no 2 3.7639E-05 63.894 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2404 951 2620 3939 6360;6361 6361 1701 0 SIPLECPLSSPK DSTKLELALTGGEAKSIPLECPLSSPKGVL EAKSIPLECPLSSPKGVLFSSKSAEVCKQD K S I P K G 0 0 0 0 1 0 1 0 0 1 2 1 0 0 3 3 0 0 0 0 0 0 12 0 1326.6853 I3L2A2;I3L2N7;A0A140VK05;B4DN86;Q92667 I3L2A2 142 153 AKAP1 A-kinase anchor protein 1, mitochondrial yes no 2 0.0021295 67.456 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2405 282 2621 3940 6362 6362 395;396 0 SIPSMVDGLKPGQR INKELILFSNSDNERSIPSMVDGLKPGQRK RSIPSMVDGLKPGQRKVLFTCFKRNDKREV R S I Q R K 0 1 0 1 0 1 0 2 0 1 1 1 1 0 2 2 0 0 0 1 0 0 14 1 1483.7817 P11388 P11388 714 727 TOP2A DNA topoisomerase 2-alpha yes yes 3 0.028059 43.184 1 0.6588 0.98313 NaN 1 Median NaN NaN NaN 0 0 Median 0.6588 0.98313 NaN 1 0 Median 24089000 12775000 11314000 0 0 0 24089000 12775000 11314000 2406 734 2622 3941 6363 6363 165 1 SIRPLLEGR IKEMGFTNMTEIQHKSIRPLLEGRDLLAAA TEIQHKSIRPLLEGRDLLAAAKTGSGKTLA K S I G R D 0 2 0 0 0 0 1 1 0 1 2 0 0 0 1 1 0 0 0 0 0 0 9 1 1039.6138 Q4ZG72;A0A024RAH8;Q9NVP1 Q4ZG72 85 93 DDX18 ATP-dependent RNA helicase DDX18 yes no 2;3 0.0030006 57.348 2 0.65125 1.0204 15.128 2 Median NaN NaN NaN 0 0 Median 0.65125 1.0204 15.128 2 0 Median 26831000 16113000 10717000 0 0 0 26831000 16113000 10717000 2407 130 2623 3942;3943 6364;6365;6366 6365 3 SISDVTFGAGVSYIGTPR EIEHVTKRAISTPEKSISDVTFGAGVSYIG DVTFGAGVSYIGTPRTPSSAKEKIEGRSQG K S I P R T 1 1 0 1 0 0 0 3 0 2 0 0 0 1 1 3 2 0 1 2 0 0 18 0 1825.921 P42695;Q96FA6 P42695 1419 1436 NCAPD3 Condensin-2 complex subunit D3 yes no 2 5.8719E-05 43.991 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2408 759 2624 3944 6367 6367 1193;1194 0 SIYFSSPK RERCLGPPTTPGPYRSIYFSSPKGHLTRLG TTPGPYRSIYFSSPKGHLTRLGLEFFDQPA R S I P K G 0 0 0 0 0 0 0 0 0 1 0 1 0 1 1 3 0 0 1 0 0 0 8 0 927.47018 A2IDA3;Q1W6H1;P29372 A2IDA3 56 63 MPG DNA-3-methyladenine glycosylase yes no 2 0.0034292 61.593 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2409 305 2625 3945;3946 6368;6369;6370;6371 6369 454;455 0 SIYSQIQEQR YPHIKRIARHRHLPKSIYSQIQEQRIMKEA RHLPKSIYSQIQEQRIMKEARRRKEVNRIK K S I Q R I 0 1 0 0 0 3 1 0 0 2 0 0 0 0 0 2 0 0 1 0 0 0 10 0 1250.6255 A0A087WT20;Q9NV06 A0A087WT20 551 560 DCAF13 DDB1- and CUL4-associated factor 13 yes no 2 0.023006 42.743 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2413500 0 2413500 0 0 0 2413500 0 2413500 2410 179 2626 3947 6372 6372 1 SKAEAESLYQSK IIAEVKAQYEDIAQKSKAEAESLYQSKYEE AQKSKAEAESLYQSKYEELQITAGRHGDSV K S K S K Y 2 0 0 0 0 1 2 0 0 0 1 2 0 0 0 3 0 0 1 0 0 0 12 1 1339.662 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;H6VRG2;H6VRF9;CON__P04264 H6VRG3 365 376 KRT1 Keratin, type II cytoskeletal 1 yes no 2 1.0766E-130 159.44 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 85091000 85091000 0 0 0 0 85091000 85091000 0 + 2411 670 2627 3948 6373 6373 1 SKDEEEDEESDDADDTPILK SSQDVLRCQSSSKRKSKDEEEDEESDDADD EDEESDDADDTPILKPVSLLRKRDVKNSPL K S K L K P 1 0 0 6 0 0 5 0 0 1 1 2 0 0 1 2 1 0 0 0 0 0 20 1 2278.9449 A5PKX7;Q92794;C9K0F9 A5PKX7 1104 1123 MYST3;KAT6A Histone acetyltransferase;Histone acetyltransferase KAT6A yes no 2 2.7457E-15 83.499 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2412 321 2628 3949 6374 6374 491 0 SKGESDDFHMDFDSAVAPR SNFEKIVSKAVTSKKSKGESDDFHMDFDSA SDDFHMDFDSAVAPRAKSVRAKKPIKYLEE K S K P R A 2 1 0 4 0 0 1 1 1 0 0 1 1 2 1 3 0 0 0 1 0 0 19 1 2109.9062 P11388 P11388 1491 1509 TOP2A DNA topoisomerase 2-alpha yes yes 3 1.131E-09 72.145 1 0.75349 1.1858 NaN 1 Median NaN NaN NaN 0 0 Median 0.75349 1.1858 NaN 1 0 Median 98851000 57709000 41141000 0 0 0 98851000 57709000 41141000 2413 734 2629 3950 6375;6376 6375 160 2 SKNEDRGEEEAESSISSTSNEQLK LELHQRFLREGRFWKSKNEDRGEEEAESSI EAESSISSTSNEQLKVTQEPKKKKKKKKK_ K S K L K V 1 1 2 1 0 1 6 1 0 1 1 2 0 0 0 6 1 0 0 0 0 0 24 2 2653.1951 Q6PJR5;B7Z3Z1;Q5UGI2;A0A0A0MRY2;Q5BJG6;B7Z3W2;B0QZE2;B7Z2J6;E7ENI9;J3QKD2;Q15326 Q6PJR5 325 348 ZMYND11 Zinc finger MYND domain-containing protein 11 yes no 3;4 1.2691E-15 55.413 2 1.1797 1.4109 NaN 1 Median 1.1797 1.4109 NaN 1 0 Median NaN NaN NaN 0 0 Median 8446600 2960900 5485700 8446600 2960900 5485700 0 0 0 2414 217 2630;2631 3951;3952 6377;6378 6377 301;302 1 SKSNPDFLK KSPDSATVSGYDIMKSKSNPDFLKKDRSCV GYDIMKSKSNPDFLKKDRSCVTRQLRNIRS K S K L K K 0 0 1 1 0 0 0 0 0 0 1 2 0 1 1 2 0 0 0 0 0 0 9 1 1034.5397 B9EGI2;Q6WCQ1;J3KSW8;H0Y7E2;Q9Y6X7;H0Y2S9;J3QL44;K7EL39;Q96EE5;A8CGI1;J3QRL2;A8CGI0;H7C3G6 B9EGI2 990 998 MPRIP;KIAA0864;M-RIP Myosin phosphatase Rho-interacting protein yes no 2 0.010002 53.569 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2415 553 2632 3953 6379;6380 6380 815 0 SKSPPKSPEEEGAVSS SPPPVSKRESKSRSRSKSPPKSPEEEGAVS KSPPKSPEEEGAVSS_______________ R S K S S - 1 0 0 0 0 0 3 1 0 0 0 2 0 0 3 5 0 0 0 1 0 0 16 2 1614.7737 B3KVY2;Q8NAK9;B3KUY1;Q53FN0;A0A024R8U5;Q01130 B3KVY2 180 195 SFRS2;SRSF2 Serine/arginine-rich splicing factor 2 yes no 2 6.722E-07 81.594 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2416 106 2633 3954;3955 6381;6382 6382 155;156 0 SKTDNSSLSSPLNPK KRKNTGSPDRKPSKKSKTDNSSLSSPLNPK SKTDNSSLSSPLNPKLWCHVHLKKSLSGSP K S K P K L 0 0 2 1 0 0 0 0 0 0 2 2 0 0 2 5 1 0 0 0 0 0 15 1 1573.7948 Q9UIG0 Q9UIG0 321 335 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 3 6.1116E-35 103.99 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2417 952 2634 3956;3957 6383;6384 6383 1705;1706 0 SLADILDPSVKIK LKSEELAREIVGKDKSLADILDPSVKIKTT DKSLADILDPSVKIKTTMDLMEGIFPKDEH K S L I K T 1 0 0 2 0 0 0 0 0 2 2 2 0 0 1 2 0 0 0 1 0 0 13 1 1397.813 C9IZC6;B3KU73;F5H3B6;B7Z682;Q13796 C9IZC6 164 176 SHROOM2 Protein Shroom2 yes no 2 0.00033367 70.412 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2418 446 2635 3958;3959;3960;3961 6385;6386;6387;6388;6389;6390;6391 6390 652 0 SLAFDSEHSADEK DPESEHDLLLNGCLKSLAFDSEHSADEKEK LKSLAFDSEHSADEKEKPCAKSRARKSSDN K S L E K E 2 0 0 2 0 0 2 0 1 0 1 1 0 1 0 3 0 0 0 0 0 0 13 0 1434.6263 B2RWP5;Q96L73;A4QPE5;Q96MN8 B2RWP5 209 221 NSD1 Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific yes no 2 8.483E-10 99.796 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2419 422 2636;2637 3962;3963;3964 6392;6393;6394;6395;6396 6394 626;627 0 SLAPDRSDDEHDPLDNTSRPR DDGSLKSSSPTSYWKSLAPDRSDDEHDPLD SDDEHDPLDNTSRPRYSHSYLSDSDTEAKL K S L P R Y 1 3 1 5 0 0 1 0 1 0 2 0 0 0 3 3 1 0 0 0 0 0 21 2 2392.1003 Q9NYE8;B3KVF8;B4DFN7;B4DZ32;B4DYM1;A0A0D9SFK2;A0A024QZ63;Q92614 Q9NYE8 151 171 MAJN;hCG_27198;MYO18A Unconventional myosin-XVIIIa yes no 4 5.83E-13 68.689 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2420 1 2638 3965 6397 6397 3 0 SLCIGATYDVTDSR AFIIRSFGGEVSWDKSLCIGATYDVTDSRI KSLCIGATYDVTDSRITHQIVDRPGQQTSV K S L S R I 1 1 0 2 1 0 0 1 0 1 1 0 0 0 0 2 2 0 1 1 0 0 14 0 1556.7141 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6 B5MCF9 342 355 PES1 Pescadillo homolog yes no 2 0.0047447 62.408 1 0.59702 0.76072 NaN 1 Median 0.59702 0.76072 NaN 1 0 Median NaN NaN NaN 0 0 Median 11567000 7752400 3815000 11567000 7752400 3815000 0 0 0 2421 415 2639 3966 6398 6398 1 SLDLDGIIAEVK QISDTSVVLSMDNSRSLDLDGIIAEVKAQY NSRSLDLDGIIAEVKAQYEEMAKCSRAEAE R S L V K A 1 0 0 2 0 0 1 1 0 2 2 1 0 0 0 1 0 0 0 1 0 0 12 0 1271.6973 CON__P08729;B3KY79;CON__Q3KNV1;P08729;Q3B834;Q3KNV1 CON__P08729 254 265 KRT7 Keratin, type II cytoskeletal 7 yes no 2 0.00095158 65.295 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 + 2422 576 2640 3967 6399;6400 6400 863 0 SLDLDSIIAEVK QISETNVILSMDNNRSLDLDSIIAEVKAQY NNRSLDLDSIIAEVKAQYEDIAQKSKAEAE R S L V K A 1 0 0 2 0 0 1 0 0 2 2 1 0 0 0 2 0 0 0 1 0 0 12 0 1301.7078 CON__Q5XQN5;CON__Q922U2;CON__P50446;CON__Q8BGZ7;H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;H6VRF9;CON__P04264 H6VRG3 344 355 KRT1 Keratin, type II cytoskeletal 1 no no 2 0.017514 36.684 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2355000 2355000 0 0 0 0 2355000 2355000 0 + 2423 670;584 2641 3968 6401;6402 6401 2 SLDMDSIIAEVK QISDTSVVLSMDNSRSLDMDSIIAEVKAQY NSRSLDMDSIIAEVKAQYEDIANRSRAEAE R S L V K A 1 0 0 2 0 0 1 0 0 2 1 1 1 0 0 2 0 0 0 1 0 0 12 0 1319.6643 CON__P05787;P05787;Q969I0;F8VUG2;Q7L4M3;CON__H-INV:HIT000292931 CON__P05787 253 264 KRT8 Keratin, type II cytoskeletal 8 yes no 2 7.2612E-09 98.582 3 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 + 2424 575 2642;2643 3969;3970;3971;3972;3973;3974 6403;6404;6405;6406;6407;6408;6409;6410 6406 115 859;860 0 SLDSEPSVPSAAKPPSPEK CYCCPEMVEYQKKGKSLDSEPSVPSAAKPP EPSVPSAAKPPSPEKTAPVASTPSSTPIPA K S L E K T 2 0 0 1 0 0 2 0 0 0 1 2 0 0 5 5 0 0 0 1 0 0 19 1 1921.9633 Q7Z3K3 Q7Z3K3 410 428 POGZ Pogo transposable element with ZNF domain yes yes 2;3 4.1662E-11 84.829 1 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2425 868 2644 3975;3976;3977 6411;6412;6413;6414 6413 1445 0 SLEAQVAHADQQLR KEAEQTCRHLTAQVRSLEAQVAHADQQLRD RSLEAQVAHADQQLRDLGKFQVATDALKSR R S L L R D 3 1 0 1 0 3 1 0 1 0 2 0 0 0 0 1 0 0 0 1 0 0 14 0 1564.7958 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q59HB8;Q96HN5;H0YFY6;Q7Z757;K4DIE0 A0A087WY61 1666 1679 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 yes no 3 0.00079154 43.548 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3549600 3549600 0 0 0 0 3549600 3549600 0 2426 71 2645 3978 6415 6415 1 SLEDALAEAQR ELEKRKDKETGGILRSLEDALAEAQRVNTK GILRSLEDALAEAQRVNTKSQSAFDLKKKN R S L Q R V 3 1 0 1 0 1 2 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 11 0 1201.5939 B7ZLZ7;A0A024R158;O95347;A8K984;B3KMB1;Q2KQ72;Q05BV1;Q6IPS5;Q7Z2X1 B7ZLZ7 298 308 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 yes no 2 0.010046 62.303 1 0.57492 0.75415 NaN 1 Median NaN NaN NaN 0 0 Median 0.57492 0.75415 NaN 1 0 Median 5466000 3592000 1874000 0 0 0 5466000 3592000 1874000 2427 27 2646 3979 6416 6416 1 SLEDLDLVIAGK KMSPQNIGAARPIKRSLEDLDLVIAGKKAR IKRSLEDLDLVIAGKKARAVSPLDPSKEVS R S L G K K 1 0 0 2 0 0 1 1 0 1 3 1 0 0 0 1 0 0 0 1 0 0 12 0 1271.6973 Q14865 Q14865 1015 1026 ARID5B AT-rich interactive domain-containing protein 5B yes yes 2 0.00028387 88.021 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2428 819 2647 3980 6417 6417 1351 0 SLEPPVLELSPGAK STPRKQPRKSPLVPRSLEPPVLELSPGAKA RSLEPPVLELSPGAKAQLEELMMVGDLLEV R S L A K A 1 0 0 0 0 0 2 1 0 0 3 1 0 0 3 2 0 0 0 1 0 0 14 0 1435.7922 P29375 P29375 1429 1442 KDM5A Lysine-specific demethylase 5A yes yes 2 0.00012303 66.285 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2429 751 2648 3981;3982 6418;6419;6420 6419 1170 0 SLESCLLDLR REEVAAPGAVGGERRSLESCLLDLRDSFAQ GGERRSLESCLLDLRDSFAQQLHQEAERQP R S L L R D 0 1 0 1 1 0 1 0 0 0 4 0 0 0 0 2 0 0 0 0 0 0 10 0 1204.6122 J3KPS2;Q6ZRV2 J3KPS2 512 521 FAM83H Protein FAM83H yes no 2 0.00066896 68.132 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2430 679 2649 3983 6421;6422 6422 1014 0 SLETENAGLR QELNDRLAVYIDRVRSLETENAGLRLRITE IDRVRSLETENAGLRLRITESEEVVSREVS R S L L R L 1 1 1 0 0 0 2 1 0 0 2 0 0 0 0 1 1 0 0 0 0 0 10 0 1088.5462 P02545;W8QEH3;Q5I6Y5;Q8N519;Q3BDU5;W5X314 P02545 51 60 LMNA Prelamin-A/C;Lamin-A/C yes no 2 0.017363 46.158 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2372200 0 2372200 0 0 0 2372200 0 2372200 2431 725 2650 3984 6423 6423 1 SLETSSALSPSLK IFSSKSTSRIAGLSKSLETSSALSPSLKNK SKSLETSSALSPSLKNKSKGIQSILKVPQP K S L L K N 1 0 0 0 0 0 1 0 0 0 3 1 0 0 1 5 1 0 0 0 0 0 13 0 1318.698 A0A024R8E8;Q7Z333 A0A024R8E8 712 724 SETX Probable helicase senataxin yes no 2 0.010328 49.35 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2432 104 2651 3985 6424 6424 153 0 SLFGQLHPPDEGHGD DHTTMNDDARTELYRSLFGQLHPPDEGHGD SLFGQLHPPDEGHGD_______________ R S L G D - 0 0 0 2 0 1 1 3 2 0 2 0 0 1 2 1 0 0 0 0 0 0 15 0 1604.7219 Q9NY61;A0A087WTH8 Q9NY61 546 560 AATF Protein AATF yes no 3 0.0087341 26.148 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 7862800 0 0 0 0 0 7862800 0 0 2433 945 2652 3986 6425 6425 1 SLGHGLINK GTLQSFSTVHEKFNKSLGHGLINKKRVKRK HEKFNKSLGHGLINKKRVKRKGLQNTMSVR K S L N K K 0 0 1 0 0 0 0 2 1 1 2 1 0 0 0 1 0 0 0 0 0 0 9 0 937.53451 A0A0A0MTB8;Q8NI36 A0A0A0MTB8 361 369 WDR36 WD repeat-containing protein 36 yes no 2 0.0026526 67.277 1 0.55593 0.74145 NaN 1 Median NaN NaN NaN 0 0 Median 0.55593 0.74145 NaN 1 0 Median 5430500 3043200 2387300 0 0 0 5430500 3043200 2387300 2434 225 2653 3987 6426 6426 1 SLGKDGSLEDDEDEEDDLDEGVGGK IIVVDSSMVENEVIKSLGKDGSLEDDEDEE DEDEEDDLDEGVGGKRRSMEVKPAQASHTN K S L G K R 0 0 0 7 0 0 5 5 0 0 3 2 0 0 0 2 0 0 0 1 0 0 25 1 2622.094 Q6AHZ7;Q6AWA4;Q12789 Q6AHZ7 1605 1629 DKFZp686A111;DKFZp686O0870;GTF3C1 General transcription factor 3C polypeptide 1 yes no 3 4.5085E-13 49.638 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2435 805 2654 3988 6427 6427 1321 0 SLGLDINMDSR QTFETHNSTTPLQERSLGLDINMDSRIIHE LQERSLGLDINMDSRIIHENIVEKERVQRI R S L S R I 0 1 1 2 0 0 0 1 0 1 2 0 1 0 0 2 0 0 0 0 0 0 11 0 1219.5867 Q96H22 Q96H22 226 236 CENPN Centromere protein N yes yes 2 8.3905E-05 70.235 5 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2436 902 2655;2656 3989;3990;3991;3992;3993 6428;6429;6430;6431;6432;6433;6434 6434 208 1543;1544 0 SLGLGPGER RNVTEAKLSKTKKRRSLGLGPGERVEVQVL KTKKRRSLGLGPGERVEVQVLNIDIPRSRI R S L E R V 0 1 0 0 0 0 1 3 0 0 2 0 0 0 1 1 0 0 0 0 0 0 9 0 884.47158 B7ZAA7;B7Z6X7;B3KPM8;Q8N5C6 B7ZAA7 483 491 SRBD1 S1 RNA-binding domain-containing protein 1 yes no 2 0.00041517 83.862 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2437 437 2657 3994;3995 6435;6436;6437;6438 6437 641 0 SLGNILQAKPTSSPAK SDGEVPTAVAPAQEKSLGNILQAKPTSSPA LGNILQAKPTSSPAKGPPQKAGPVAVQVKA K S L A K G 2 0 1 0 0 1 0 1 0 1 2 2 0 0 2 3 1 0 0 0 0 0 16 1 1610.8992 E7ETY2;J3KQ96;Q13428;B4DRA2;B4DLB1;Q59FZ2 E7ETY2 571 586 TCOF1 Treacle protein yes no 2;3 0 244.05 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2438 608 2658 3996;3997;3998;3999 6439;6440;6441;6442;6443;6444 6442 920;921;1922 0 SLGSVQAPSYGAR ______________________________ YRSLGSVQAPSYGARPVSSAASVYAGAGGS R S L A R P 2 1 0 0 0 1 0 2 0 0 1 0 0 0 1 3 0 0 1 1 0 0 13 0 1291.6521 F8VZY9;B2RA03;A0A024RAY2;P05783 F8VZY9 15 27 KRT18 Keratin, type I cytoskeletal 18 yes no 2 0.025457 45.334 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2439 134 2659 4000 6445 6445 195 0 SLGTADVHFER GTLKKAAVHYDRSGRSLGTADVHFERKADA RSGRSLGTADVHFERKADALKAMKQYNGVP R S L E R K 1 1 0 1 0 0 1 1 1 0 1 0 0 1 0 1 1 0 0 1 0 0 11 0 1230.5993 E9PB61;Q86V81 E9PB61 152 162 ALYREF THO complex subunit 4 yes no 2;3 0.00094315 90.108 2 0.15819 0.21637 6.2053 2 Median NaN NaN NaN 0 0 Median 0.15819 0.21637 6.2053 2 0 Median 98016000 84422000 13594000 0 0 0 98016000 84422000 13594000 2440 611 2660 4001;4002 6446;6447;6448;6449 6448 4 SLGVDMDDKDDAHYAVQAR TAKKVQRTVLEKEMRSLGVDMDDKDDAHYA DMDDKDDAHYAVQARRSRSITRKRKREDSA R S L A R R 3 1 0 5 0 1 0 1 1 0 1 1 1 0 0 1 0 0 1 2 0 0 19 1 2104.9484 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;B4DHR2 Q8N4P8 524 542 GTPBP4 Nucleolar GTP-binding protein 1 yes no 3 1.0038E-09 69.737 1 0.66665 0.91083 NaN 1 Median NaN NaN NaN 0 0 Median 0.66665 0.91083 NaN 1 0 Median 12188000 6635800 5552100 0 0 0 12188000 6635800 5552100 2441 585 2661 4003 6450 6450 120 1 SLGVLPFTLNSGSPEK SVKKAVESKSRHRSRSLGVLPFTLNSGSPE LGVLPFTLNSGSPEKTCSQVSSYSLEQESN R S L E K T 0 0 1 0 0 0 1 2 0 0 3 1 0 1 2 3 1 0 0 1 0 0 16 0 1644.8723 P42695;Q96FA6 P42695 1372 1387 NCAPD3 Condensin-2 complex subunit D3 yes no 2 1.9981E-07 70.47 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2442 759 2662;2663 4004;4005 6451;6452 6451 1195;1196 0 SLGYAYVNFQQPADAER PILSIRVCRDMITRRSLGYAYVNFQQPADA GYAYVNFQQPADAERALDTMNFDVIKGKPV R S L E R A 3 1 1 1 0 2 1 1 0 0 1 0 0 1 1 1 0 0 2 1 0 0 17 0 1927.9064 A0A024R9E2;A0A087WTT1;E7EQV3;B4DZW4;E7ERJ7;B4DQX0;B3KT93;A0A024R9C1;P11940;E5RGH3;H0YBN4;B1ANR0;Q6IQ30;Q13310;E5RHG7;E5RH24;E5RJB9;B1ANR1 A0A024R9E2 51 67 PABPC1;PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 1;Polyadenylate-binding protein 4 yes no 2 4.4519E-37 125.98 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2443 113 2664 4006 6453 6453 167 0 SLHLSPQEQSASYQDR GGNCDLSHQERLQSKSLHLSPQEQSASYQD LHLSPQEQSASYQDRRQSWRRASMKETNRR K S L D R R 1 1 0 1 0 3 1 0 1 0 2 0 0 0 1 4 0 0 1 0 0 0 16 0 1844.8653 Q5JW53;A8K3X3;Q9H410;Q4G1A1 Q5JW53 77 92 DSN1 Kinetochore-associated protein DSN1 homolog yes no 3 0.00013306 49.188 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2444 350 2665 4007 6454 6454 532 0 SLIVEGKR EDEDDEEEEEEEKEKSLIVEGKREKKKVER EEEEKEKSLIVEGKREKKKVERLTMQVSSL K S L K R E 0 1 0 0 0 0 1 1 0 1 1 1 0 0 0 1 0 0 0 1 0 0 8 1 900.53927 P35659;B4DFG0;B4DNW3;D6R9L5 P35659 51 58 DEK Protein DEK yes no 2 0.0015426 68.847 1 2 0.52612 0.71013 NaN 1 Median NaN NaN NaN 0 0 Median 0.52612 0.71013 NaN 1 0 Median 10961000 7131900 3829300 0 0 0 10961000 7131900 3829300 2445 754 2666;2667 4008;4009;4010 6455;6456;6457;6458 6455 1181 2 SLKESEQESEEEILAQKK VQRTAKKVEGNKGTKSLKESEQESEEEILA ESEQESEEEILAQKKEQREEEVEEEEKEED K S L K K E 1 0 0 0 0 2 6 0 0 1 2 3 0 0 0 3 0 0 0 0 0 0 18 2 2104.0536 B2R6A9;Q9BW71 B2R6A9 219 236 HIRIP3 HIRA-interacting protein 3 yes no 3 7.2759E-07 56.453 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2446 403 2668 4011 6459 6459 596;597 0 SLLEGEGSSGGGGR LDIKIRLENEIQTYRSLLEGEGSSGGGGRG RSLLEGEGSSGGGGRGGGSFGGGYGGGSSG R S L G R G 0 1 0 0 0 0 2 6 0 0 2 0 0 0 0 3 0 0 0 0 0 0 14 0 1261.5899 CON__P13645;P13645 CON__P13645 451 464 KRT10 Keratin, type I cytoskeletal 10 yes no 2 4.0709E-10 82.171 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 11211000 11211000 0 0 0 0 11211000 11211000 0 + 2447 579 2669 4012 6460 6460 1 SLLGIDTEDAIQGR EVARLQLQGLDLSSRSLLGIDTEDAIQGRN RSLLGIDTEDAIQGRNESCDISKEHTSETT R S L G R N 1 1 0 2 0 1 1 2 0 2 2 0 0 0 0 1 1 0 0 0 0 0 14 0 1486.7627 P49454 P49454 1750 1763 CENPF Centromere protein F yes yes 2 0.0018003 45.864 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2448 768 2670 4013 6461;6462 6462 1241 0 SLLNKK IFSSFVSNWDEATKRSLLNKKKKEARRKRR SNWDEATKRSLLNKKKKEARRKRRERNFEK R S L K K K 0 0 1 0 0 0 0 0 0 0 2 2 0 0 0 1 0 0 0 0 0 0 6 1 701.44357 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;H7BZC6;Q13280;B7Z1Z6;H0Y6G2;B3KTH7;Q8WU40;Q5SWX3;A8K6N9;D3DVK8;A0A0A0MS52;Q53H78;A0A0A0MT11;B3KY86;A4D2J9;Q13555;Q13554 O76021 278 283 RSL1D1;CAMK2B;CAMK2G Ribosomal L1 domain-containing protein 1;Calcium/calmodulin-dependent protein kinase type II subunit gamma;Calcium/calmodulin-dependent protein kinase type II subunit beta yes no 2 0.028095 41.717 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2449 712 2671 4014 6463 6463 1 SLLPVKPVEIEIETPEQAK EPVLGDVRESTAFSRSLLPVKPVEIEIETP VKPVEIEIETPEQAKTRERSEKIKLEFETY R S L A K T 1 0 0 0 0 1 4 0 0 2 2 2 0 0 3 1 1 0 0 2 0 0 19 1 2119.1776 X5DRB1;D9I4E1;A8K146;A0A024R2M8;Q01831;D2CPK1;E7EUB5;D2CPI9;D2CPJ0 X5DRB1 156 174 XPC DNA repair protein complementing XP-C cells yes no 2 4.3187E-24 110.75 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2450 48 2672 4015 6464;6465 6465 1780 0 SLPEEDVAEIQHAEEFLIKPESK VIILPKKHKKKKERKSLPEEDVAEIQHAEE EIQHAEEFLIKPESKVAKLDTSQWPLLLKN K S L S K V 2 0 0 1 0 1 6 0 1 2 2 2 0 1 2 2 0 0 0 1 0 0 23 1 2637.3174 O60832;H7C0M1;C9IYT0;U5UA77;U5U7S7;H7C2Q9 O60832 21 43 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes no 3;4 6.6393E-220 195.27 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2451 706 2673 4016;4017;4018;4019 6466;6467;6468;6469;6470;6471;6472 6466 1053 0 SLSEIHSPNIQDSSFDSVR KMVKNKPDFYTKAFRSLSEIHSPNIQDSSF IHSPNIQDSSFDSVREGLVPLSVSSGKNVI R S L V R E 0 1 1 2 0 1 1 0 1 2 1 0 0 1 1 6 0 0 0 1 0 0 19 0 2117.0025 B7Z7S9;Q562F6 B7Z7S9 1138 1156 SGOL2 Shugoshin-like 2 yes no 2;3 6.5139E-136 170.38 3 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2452 543 2674;2675 4020;4021;4022;4023;4024;4025 6473;6474;6475;6476;6477;6478;6479;6480;6481 6480 789;790;791 0 SLSNSNPDISGTPTSPDDEVR RSAVRPASLNLNRSRSLSNSNPDISGTPTS PDISGTPTSPDDEVRSIIGSKGLDRSNSWV R S L V R S 0 1 2 3 0 0 1 1 0 1 1 0 0 0 3 5 2 0 0 1 0 0 21 0 2186.9927 Q96N67;A0A0U1RRC1;A0A0U1RQJ5 Q96N67 896 916 DOCK7 Dedicator of cytokinesis protein 7 yes no 2 2.5168E-08 49.149 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2453 909 2676 4026 6482 6482 1562;2031 0 SLSPGGAALGYR VGGHRHPPGGGGGQRSLSPGGAALGYRDYR GQRSLSPGGAALGYRDYRLQQLALGRLPPP R S L Y R D 2 1 0 0 0 0 0 3 0 0 2 0 0 0 1 2 0 0 1 0 0 0 12 0 1147.5986 A0A087WWP4;Q96T37 A0A087WWP4 248 259 RBM15 Putative RNA-binding protein 15 yes no 2 0.00035717 87.001 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2454 192 2677 4027;4028 6483;6484;6485;6486;6487 6485 278 0 SLSPGTGGGVR PGLPRRSAPPSPLCRSLSPGTGGGVRGGVG PLCRSLSPGTGGGVRGGVGYLSRGDPVRVL R S L V R G 0 1 0 0 0 0 0 4 0 0 1 0 0 0 1 2 1 0 0 1 0 0 11 0 986.51451 A0A0G2JIJ9;A0A140T9U3;O43189 A0A0G2JIJ9 134 144 PHF1 PHD finger protein 1 yes no 2 0.0031753 51.841 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2455 255 2678 4029 6488 6488 353 0 SLSSPTDNLELSLR IIDILSEAKRRQQGKSLSSPTDNLELSLRS KSLSSPTDNLELSLRSQSDLDDQHDYDSVA K S L L R S 0 1 1 1 0 0 1 0 0 0 4 0 0 0 1 4 1 0 0 0 0 0 14 0 1530.789 Q7Z2E5;B4DMF7;J3QRU8;A0A0C4DGN6;Q59FC3;Q9Y2X7 Q7Z2E5 133 146 DKFZp686G1540;GIT1 ARF GTPase-activating protein GIT1 yes no 2 0.0010808 56.225 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2456 245 2679 4030 6489;6490 6489 339;340 0 SLSVLSPR DTKRADVAGPRPCQRSLSVLSPRQPAQNRE GPRPCQRSLSVLSPRQPAQNRESTPLASGP R S L P R Q 0 1 0 0 0 0 0 0 0 0 2 0 0 0 1 3 0 0 0 1 0 0 8 0 857.49707 Q59F18;B3KY54;B3KUD6;B3KY41;B4E229;B4DI56;A0A087WVP4;A0A087X1R1;P53814 Q59F18 237 244 SMTN Smoothelin yes no 2 0.0069031 53.756 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2457 188 2680 4031 6491;6492 6491 267 0 SLSYSPVER SRSPRKPIDSLRDSRSLSYSPVERRRPSPQ SLRDSRSLSYSPVERRRPSPQPSPRDQQSS R S L E R R 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 3 0 0 1 1 0 0 9 0 1036.5189 A0A140VK53;Q9UQ35;I3L4U6;Q5JPB4 A0A140VK53 2690 2698 SRRM2;DKFZp667L0421 Serine/arginine repetitive matrix protein 2 yes no 2 0.006791 48.44 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2458 284 2681 4032 6493 6493 412;413 0 SLTDPSQESHTEAISDAETSSSDISFSGIATR LPTEKTTGARRSKAKSLTDPSQESHTEAIS ETSSSDISFSGIATRRTRSMQRKLKAQTEK K S L T R R 3 1 0 3 0 1 3 1 1 3 1 0 0 1 1 9 4 0 0 0 0 0 32 0 3325.507 J3KP30;B7Z854;Q5QJE6 J3KP30 170 201 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 yes no 3 2.6432E-17 48.655 2 1 0.71325 0.93658 25.889 2 Median 0.89098 1.1247 NaN 1 0 Median 0.57097 0.77991 NaN 1 0 Median 56709000 33861000 22848000 16569000 9096100 7472800 40140000 24765000 15376000 2459 545 2682;2683 4033;4034;4035 6494;6495;6496 6496 796;797;798;799;1900;1901 2 SLTQTFATVEVGR AVSVHSNLNSEAVMKSLTQTFATVEVGRWN MKSLTQTFATVEVGRWNNNKKSPIKASDLT K S L G R W 1 1 0 0 0 1 1 1 0 0 1 0 0 1 0 1 3 0 0 2 0 0 13 0 1407.7358 J3KP30;B7Z854;Q5QJE6 J3KP30 362 374 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 yes no 2 0.0027116 45.077 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 5007300 5007300 0 0 0 0 5007300 5007300 0 2460 545 2684 4036 6497 6497 1 SLTRSPPAIR RRSRSRTPRTARGKRSLTRSPPAIRRRSAS ARGKRSLTRSPPAIRRRSASGSSSDRSRSA R S L I R R 1 2 0 0 0 0 0 0 0 1 1 0 0 0 2 2 1 0 0 0 0 0 10 1 1096.6353 A0A140VK53;Q9UQ35;O60382 A0A140VK53 2067 2076 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 yes no 2 0.0070483 51.009 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2461 284 2685 4037 6498 6498 414;415 0 SLVAFEGEGQFEK QFFGDAPERAWIFEKSLVAFEGEGQFEKLC EKSLVAFEGEGQFEKLCQESAKQAPTKAEK K S L E K L 1 0 0 0 0 1 3 2 0 0 1 1 0 2 0 1 0 0 0 1 0 0 13 0 1439.6933 Q05CW4;D6R9V2;O96028 O96028 280 292 WHSC1 Histone-lysine N-methyltransferase NSD2 no no 2 0.00018793 82.543 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2462 724;800 2686 4038 6499;6500;6501 6500 1110 0 SLVESVSSSPNK QISDSPFRCTQEEARSLVESVSSSPNKESN EARSLVESVSSSPNKESNEEEQVWHFLGK_ R S L N K E 0 0 1 0 0 0 1 0 0 0 1 1 0 0 1 5 0 0 0 2 0 0 12 0 1232.6248 A8K0P2;Q9H2U2 A8K0P2 249 260 PPA2 Inorganic pyrophosphatase 2, mitochondrial yes no 2 4.1197E-05 75.294 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2463 336 2687 4039 6502 6502 510;511;512 0 SLYASSPGGVYATR RTYSLGSALRPSTSRSLYASSPGGVYATRS RSLYASSPGGVYATRSSAVRLRSSVPGVRL R S L T R S 2 1 0 0 0 0 0 2 0 0 1 0 0 0 1 3 1 0 2 1 0 0 14 0 1427.7045 V9HWE1;P08670;Q53HU8;B0YJC4;B3KRK8;A0A1B0GTT5;A0A1B0GUA0;A0A1B0GVG8 V9HWE1 51 64 HEL113;VIM Vimentin yes no 2 1.6586E-15 107.35 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2464 731 2688 4040;4041 6503;6504;6505;6506;6507;6508;6509;6510;6511;6512 6508 1131 0 SLYNLGGSKR VSLGGAYGAGGFGSRSLYNLGGSKRISISA GFGSRSLYNLGGSKRISISASGGGFRNRFG R S L K R I 0 1 1 0 0 0 0 2 0 0 2 1 0 0 0 2 0 0 1 0 0 0 10 1 1093.588 CON__P13647;P13647;F8VV57;CON__Q5XQN5 CON__Q5XQN5 64 73 KRT5 Keratin, type II cytoskeletal 5 no no 2 0.008827 52.482 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3568700 3568700 0 0 0 0 3568700 3568700 0 + 2465 584;580 2689 4042 6513 6513 1 SNEDSLILEK DEELTNDSLTLSQSKSNEDSLILEKSQNWS LSQSKSNEDSLILEKSQNWSSQKMDHILIC K S N E K S 0 0 1 1 0 0 2 0 0 1 2 1 0 0 0 2 0 0 0 0 0 0 10 0 1146.5768 A0A0U1RRH6;O94880 A0A0U1RRH6 298 307 PHF14 PHD finger protein 14 yes no 2 2.8298E-13 107.09 1 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2466 275 2690 4043;4044;4045 6514;6515;6516;6517;6518;6519 6516 380;381 0 SNFSNSADDIK ENNKPREKSESNKRKSNFSNSADDIKSKKK NKRKSNFSNSADDIKSKKKREQSNDIARGF K S N I K S 1 0 2 2 0 0 0 0 0 1 0 1 0 1 0 3 0 0 0 0 0 0 11 0 1196.5309 V9HWG0;P45973;Q6I9T7 V9HWG0 92 102 HEL25;CBX5 Chromobox protein homolog 5 yes no 2 9.4241E-05 73.887 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 10564000 0 10564000 0 0 0 10564000 0 10564000 2467 761 2691 4046 6520 6520 1 SNILSNEMK QKEKIHEDTKEINEKSNILSNEMKAKNKDV KEINEKSNILSNEMKAKNKDVKDTEKKLNK K S N M K A 0 0 2 0 0 0 1 0 0 1 1 1 1 0 0 2 0 0 0 0 0 0 9 0 1034.5066 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83 Q9NTJ3 355 363 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 2 0.0065986 53.237 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2468 941 2692 4047 6521 6521 220 1673 0 SNMSPHGLPAR KMPTRLDGERPGPNRSNMSPHGLPARSSGS GPNRSNMSPHGLPARSSGSPKFAMKTRQAF R S N A R S 1 1 1 0 0 0 0 1 1 0 1 0 1 0 2 2 0 0 0 0 0 0 11 0 1165.5662 Q59FW1;H0Y4T7;A0A024R6P5;E7ESY4;Q13330 Q59FW1 238 248 MTA1 Metastasis-associated protein MTA1 yes no 2 0.012648 43.594 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2469 83 2693 4048 6522 6522 15 114 0 SNNIINETTTR KDKEKVEEFKSIPAKSNNIINETTTRNNAL IPAKSNNIINETTTRNNALEKEKEKEEKKL K S N T R N 0 1 3 0 0 0 1 0 0 2 0 0 0 0 0 1 3 0 0 0 0 0 11 0 1261.6262 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;B3KVJ5 Q9NTJ3 435 445 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 2 0.024458 49.5 1 0.6893 0.92533 NaN 1 Median NaN NaN NaN 0 0 Median 0.6893 0.92533 NaN 1 0 Median 8402400 4774600 3627800 0 0 0 8402400 4774600 3627800 2470 941 2694 4049 6523 6523 1 SNPGGFGIAPHCLDEGTVR TFCKRCGVQSFYTPRSNPGGFGIAPHCLDE GFGIAPHCLDEGTVRSMVTEEFNGSDWEKA R S N V R S 1 1 1 1 1 0 1 4 1 1 1 0 0 1 2 1 1 0 0 1 0 0 19 0 1982.9269 Q7Z7K6 Q7Z7K6 229 247 CENPV Centromere protein V yes yes 3 9.8175E-07 49.188 1 0.72188 0.93726 NaN 1 Median NaN NaN NaN 0 0 Median 0.72188 0.93726 NaN 1 0 Median 13599000 8040000 5558500 0 0 0 13599000 8040000 5558500 2471 871 2695 4050 6524;6525 6524 2 SNRDELELELAENRK QFQMRRLKKQLADERSNRDELELELAENRK SNRDELELELAENRKLLTEKDAQIAMMQQR R S N R K L 1 2 2 1 0 0 4 0 0 0 3 1 0 0 0 1 0 0 0 0 0 0 15 2 1814.9123 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;A0A024R5G4;F5H4J1;A8K394;Q3SYK8;F5H6Y5 A0A087WY61 228 242 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 yes no 3 0.0076645 25.167 1 0.28568 0.39713 NaN 1 Median NaN NaN NaN 0 0 Median 0.28568 0.39713 NaN 1 0 Median 45531000 35548000 9982400 0 0 0 45531000 35548000 9982400 2472 71 2696 4051 6526;6527 6526 2 SNSPLPVPPSK KGDIKSKSRSRSQSRSNSPLPVPPSKARSV SQSRSNSPLPVPPSKARSVSPPPKRATSRS R S N S K A 0 0 1 0 0 0 0 0 0 0 1 1 0 0 4 3 0 0 0 1 0 0 11 0 1121.6081 V9HVZ0;A8K588;Q13247 V9HVZ0 301 311 HEL-S-91;SRSF6 Serine/arginine-rich splicing factor 6 yes no 2 2.3428E-81 153.32 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2473 362 2697 4052;4053 6528;6529;6530;6531;6532;6533;6534 6529 556;557 0 SNVESALSHGLK NCELSDHCIKLQKRKSNVESALSHGLKSLN KRKSNVESALSHGLKSLNRKSPSHSSSSED K S N L K S 1 0 1 0 0 0 1 1 1 0 2 1 0 0 0 3 0 0 0 1 0 0 12 0 1240.6412 A6H8Z4;A0A024R250;Q76FK4;B4DM91;F8WE42;Q6AI50;F5H101 A6H8Z4 364 375 NOL8;DKFZp686P12242 Nucleolar protein 8 yes no 2 0.0067272 46.592 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3858800 3858800 0 0 0 0 3858800 3858800 0 2474 42 2698 4054 6535 6535 1 SNYNLPMHK LDELYGTWRKAASLKSNYNLPMHKMINTDL KAASLKSNYNLPMHKMINTDLSRILKSPEI K S N H K M 0 0 2 0 0 0 0 0 1 0 1 1 1 0 1 1 0 0 1 0 0 0 9 0 1102.523 Q59GY2;P36578;H3BM89;B4DMJ6;B4DMJ2 Q59GY2 289 297 RPL4 60S ribosomal protein L4 yes no 2 0.0097064 57.931 1 0.61357 0.77354 NaN 1 Median NaN NaN NaN 0 0 Median 0.61357 0.77354 NaN 1 0 Median 99958000 62340000 37618000 0 0 0 99958000 62340000 37618000 2475 755 2699 4055 6536;6537 6537 171 2 SPAPGAPTRSPSTPAK KAKVPAQANGTPTTKSPAPGAPTRSPSTPA PAPGAPTRSPSTPAKSPKLQKKNQKPSQVN K S P A K S 3 1 0 0 0 0 0 1 0 0 0 1 0 0 5 3 2 0 0 0 0 0 16 1 1520.7947 Q9BQG0;I3L1L3;B4DE42;B4DZZ1 Q9BQG0 1232 1247 MYBBP1A Myb-binding protein 1A yes no 2 4.0667E-07 86.641 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2476 914 2700 4056 6538;6539 6538 1578;2033 0 SPEAVGPELEAEEK PPLPPPPPPPGELARSPEAVGPELEAEEKL RSPEAVGPELEAEEKLSVRVAESAAAAPQG R S P E K L 2 0 0 0 0 0 5 1 0 0 1 1 0 0 2 1 0 0 0 1 0 0 14 0 1483.7042 Q96N64 Q96N64 81 94 PWWP2A PWWP domain-containing protein 2A yes yes 2 1.3273E-219 196.37 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2477 908 2701 4057;4058 6540;6541;6542;6543;6544;6545;6546;6547 6546 1560 0 SPEEHLEEMMK LSGSPLKVKNSKNSKSPEEHLEEMMKMMSP KNSKSPEEHLEEMMKMMSPNKLHTNFHIPK K S P M K M 0 0 0 0 0 0 4 0 1 0 1 1 2 0 1 1 0 0 0 0 0 0 11 0 1358.5846 Q9UIG0 Q9UIG0 361 371 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 2 1.681E-08 80.318 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2478 952 2702 4059 6548 6548 227;228 1707 0 SPEPEATLTFPFLDK GKVELVLSQKVVKPKSPEPEATLTFPFLDK SPEPEATLTFPFLDKMPEANQLHLPNLNSQ K S P D K M 1 0 0 1 0 0 2 0 0 0 2 1 0 2 3 1 2 0 0 0 0 0 15 0 1690.8454 B7Z7Z0;B7Z5G6;B7Z656;B7Z3F1;B7Z3G0;B7Z5Q8;E7EPK0;E9PDJ9;B7Z2J4;H0Y8P3;G5EA03;Q9UPQ0 B7Z7Z0 71 85 LIMCH1 LIM and calponin homology domains-containing protein 1 yes no 2 3.5226E-35 122.93 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2479 536 2703 4060 6549 6549 773 0 SPFAAAVGQEK KKKREAPLTGKKKRKSPFAAAVGQEKPVFE KKRKSPFAAAVGQEKPVFEPGEAQVGRPWV K S P E K P 3 0 0 0 0 1 1 1 0 0 0 1 0 1 1 1 0 0 0 1 0 0 11 0 1103.5611 B7ZLF4;A0A024R7C4;B4DUY9;Q8N9T8;B4DUT2 B7ZLF4 374 384 KRI1;FLJ12949 Protein KRI1 homolog yes no 2 0.0041403 56.951 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2480 90 2704 4061;4062;4063 6550;6551;6552 6552 125 0 SPFNSPSPQDSPR EGGISSPVKKTEMDKSPFNSPSPQDSPRLS DKSPFNSPSPQDSPRLSSFTQHHRPVIAVH K S P P R L 0 1 1 1 0 1 0 0 0 0 0 0 0 1 4 4 0 0 0 0 0 0 13 0 1414.6477 Q6FI30;P08651;B7Z4T6 Q6FI30 324 336 NFIC Nuclear factor 1;Nuclear factor 1 C-type yes no 2 3.311E-31 125.36 5 5 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2481 730 2705;2706;2707 4064;4065;4066;4067;4068;4069;4070;4071;4072;4073 6553;6554;6555;6556;6557;6558;6559;6560;6561;6562;6563;6564;6565;6566;6567;6568 6561 1126;1127;1128 0 SPGALETPSAAGSQGNTASQGK GPPEDSGASAAKGQKSPGALETPSAAGSQG PSAAGSQGNTASQGKEGPYSEPSKRGPLSK K S P G K E 4 0 1 0 0 2 1 4 0 0 1 1 0 0 2 4 2 0 0 0 0 0 22 0 2014.9556 C9JVY5;A0A024R167;B4E2K2;A0A024R152;Q9Y2D5 C9JVY5 442 463 AKAP2;hCG_28765 A-kinase anchor protein 2 yes no 2 3.8957E-07 44.788 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2482 26 2708 4074 6569 6569 23 0 SPGSPPGPELPIETALDDR QLIVARRISKCNELKSPGSPPGPELPIETA PPGPELPIETALDDRERRISHSLYSGIEGL K S P D R E 1 1 0 2 0 0 2 2 0 1 2 0 0 0 5 2 1 0 0 0 0 0 19 0 1946.9585 B1AP52;Q8IX26;F5GZI3;Q8IX28;Q8IX27;Q5VWU8;Q5VWV2;Q8TEW0 B1AP52 130 148 PARD3 Partitioning defective 3 homolog yes no 2 1.8404E-06 49.049 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2483 394 2709 4075 6570 6570 592 0 SPHIETYLK VVVQVLDARDPMGTRSPHIETYLKKEKPWK DPMGTRSPHIETYLKKEKPWKHLIFVLNKC R S P L K K 0 0 0 0 0 0 1 0 1 1 1 1 0 0 1 1 1 0 1 0 0 0 9 0 1086.571 Q5T0F3;Q13823;B4DPI9;H0YG10 Q5T0F3 234 242 GNL2 Nucleolar GTP-binding protein 2 yes no 2 1.0585E-37 129.42 1 0.5109 0.64541 NaN 1 Median NaN NaN NaN 0 0 Median 0.5109 0.64541 NaN 1 0 Median 19399000 12378000 7020900 0 0 0 19399000 12378000 7020900 2484 809 2710 4076 6571 6571 1 SPISVPGGSALISNLGK TTVVGGVTKTITLVKSPISVPGGSALISNL ISVPGGSALISNLGKVMSVVQTKPVQTSAV K S P G K V 1 0 1 0 0 0 0 3 0 2 2 1 0 0 2 4 0 0 0 1 0 0 17 0 1595.8883 A6NEM2;P51610 A6NEM2 666 682 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 2 4.8008E-08 76.82 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2485 325 2711 4077 6572 6572 496 0 SPLAQDSPSQGSPALYR IRFIARQQNIKNARKSPLAQDSPSQGSPAL LAQDSPSQGSPALYRNVNTLRERISAFQSA K S P Y R N 2 1 0 1 0 2 0 1 0 0 2 0 0 0 3 4 0 0 1 0 0 0 17 0 1772.8693 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 105 121 CDCA2 Cell division cycle-associated protein 2 yes no 2 5.0593E-28 119.39 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2486 615 2712;2713 4078;4079;4080 6573;6574;6575;6576;6577 6574 935;936 0 SPLGGGGGSGASSQAACLK ______________________________ GGGGSGASSQAACLKQILLLQLDLIEQQQQ K S P L K Q 3 0 0 0 1 1 0 6 0 0 2 1 0 0 1 4 0 0 0 0 0 0 19 0 1660.7839 A0A024R1R9;J3QQY0;J3KSZ8;Q68DK7 A0A024R1R9 4 22 hCG_31740;MSL1 Male-specific lethal 1 homolog yes no 2 1.3134E-46 98.227 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2487 35 2714 4081 6578 6578 32 0 SPLHVGETR NSSNGKSEWLDPSQKSPLHVGETRKEDDPN LDPSQKSPLHVGETRKEDDPNEDWCAVCQN K S P T R K 0 1 0 0 0 0 1 1 1 0 1 0 0 0 1 1 1 0 0 1 0 0 9 0 994.51959 B4DYZ9;A0A024R784;O15164 B4DYZ9 722 730 TRIM24 Transcription intermediary factor 1-alpha yes no 2 0.005883 45.879 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2488 88 2715 4082 6579 6579 123 0 SPLKPESQLDLR NTQDEEETKKEESLKSPLKPESQLDLRVQE SLKSPLKPESQLDLRVQELIKLICNVQAME K S P L R V 0 1 0 1 0 1 1 0 0 0 3 1 0 0 2 2 0 0 0 0 0 0 12 1 1381.7565 G3V167;A8K214;Q9UGN5 G3V167 226 237 PARP2 Poly [ADP-ribose] polymerase 2 yes no 2 0.0080021 65.563 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2489 343 2716 4083 6580 6580 521 0 SPLLAGGSPPQPVVPAHK PRSISGPSVGVMEMRSPLLAGGSPPQPVVP LAGGSPPQPVVPAHKDKSGAPPVRS_____ R S P H K D 2 0 0 0 0 1 0 2 1 0 2 1 0 0 5 2 0 0 0 2 0 0 18 0 1750.973 C9JIY9;C9IYQ7;F8WCF5;F8WEL4;A8K0N6;A8K3Z5;Q8NFH5 C9JIY9 49 66 NUP35 Nucleoporin NUP53 yes no 3 9.1142E-11 63.69 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2490 335 2717 4084 6581 6581 509 0 SPLLQEPTPK QAGAYDRLSPHHWEKSPLLQEPTPKLAGTE HHWEKSPLLQEPTPKLAGTEAPRMRSDNKE K S P P K L 0 0 0 0 0 1 1 0 0 0 2 1 0 0 3 1 1 0 0 0 0 0 10 0 1108.6128 Q15697;V9GZ69;Q8IZN5;I3L2H2 Q15697 195 204 ZNF174 Zinc finger protein 174 yes no 2 0.0032057 53.567 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2491 824 2718 4085;4086 6582;6583 6582 1362 0 SPLQSVVVR AVSELSPRERSPALKSPLQSVVVRRRSPRP RSPALKSPLQSVVVRRRSPRPSPVPKPSPP K S P V R R 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 2 0 0 0 3 0 0 9 0 983.57638 Q9Y2W1;Q7Z5U1;Q05D20;Q6P0P7;Q6PJV4 Q9Y2W1 253 261 THRAP3 Thyroid hormone receptor-associated protein 3 yes no 2 1.4308E-05 94.692 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2492 963 2719 4087;4088 6584;6585;6586;6587;6588;6589;6590;6591 6585 1741 0 SPLRRSPPR GQARQPTPPFFGRDRSPLRRSPPRASYVAP FFGRDRSPLRRSPPRASYVAPLTAQPATYR R S P P R A 0 3 0 0 0 0 0 0 0 0 1 0 0 0 3 2 0 0 0 0 0 0 9 2 1064.6203 A0A0S2Z4Z0;Q96PK6;Q59GV2 A0A0S2Z4Z0 215 223 RBM14 RNA-binding protein 14 yes no 3 0.014839 46.706 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2493 267 2720 4089 6592 6592 367 0 SPLTGYVR GRKRKKPLRDSNAPKSPLTGYVRFMNERRE RDSNAPKSPLTGYVRFMNERREQLRAKRPE K S P V R F 0 1 0 0 0 0 0 1 0 0 1 0 0 0 1 1 1 0 1 1 0 0 8 0 891.48142 H0YNS8;H0YKM5;Q9NP66 H0YNS8 105 112 HMG20A High mobility group protein 20A yes no 2 0.0027422 65.224 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2494 657 2721 4090 6593 6593 983 0 SPLYLVSR RPSQCSEFIQQSSMKSPLYLVSRSLPSSSQ IQQSSMKSPLYLVSRSLPSSSQLKGSPQAI K S P S R S 0 1 0 0 0 0 0 0 0 0 2 0 0 0 1 2 0 0 1 1 0 0 8 0 933.52837 Q8WYP5;B3KTD2;B3KVE5 Q8WYP5 1142 1149 AHCTF1 Protein ELYS yes no 2 0.004683 58.981 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2495 897 2722 4091 6594;6595 6595 1529 0 SPPADAIPK ______________________________ RIAKRRSPPADAIPKSKKVKVSHRSHSTEP R S P P K S 2 0 0 1 0 0 0 0 0 1 0 1 0 0 3 1 0 0 0 0 0 0 9 0 894.48108 C9JRH2;C9JMJ4;C9J3R0;C9JQZ4;C9JW69;Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;M0R1Q8 C9JRH2 11 19 RCC1 Regulator of chromosome condensation yes no 2 0.0038303 51.445 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2496 262 2723 4092 6596;6597 6596 357 0 SPPAPGLQPMR VAHGPVCKISPEERRSPPAPGLQPMRSGGG EERRSPPAPGLQPMRSGGGSVGAVVVKQEP R S P M R S 1 1 0 0 0 1 0 1 0 0 1 0 1 0 4 1 0 0 0 0 0 0 11 0 1149.5965 C9JCN8;P15408 C9JCN8 161 171 FOSL2 Fos-related antigen 2 yes no 2 0.00189 67.385 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2497 560 2724 4093 6598;6599;6600;6601 6600 109 841 0 SPPEGDTTLFLSR LSVPPSPNISTSESRSPPEGDTTLFLSRLS SRSPPEGDTTLFLSRLSTIWKGFINMQSVA R S P S R L 0 1 0 1 0 0 1 1 0 0 2 0 0 1 2 2 2 0 0 0 0 0 13 0 1418.7042 Q9BTC0 Q9BTC0 1040 1052 DIDO1 Death-inducer obliterator 1 yes yes 2 8.3761E-05 72.175 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2498 916 2725 4094;4095 6602;6603 6603 1585 0 SPPKSPEEEGAVSS PPVSKRESKSRSRSKSPPKSPEEEGAVSS_ KSPPKSPEEEGAVSS_______________ K S P S S - 1 0 0 0 0 0 3 1 0 0 0 1 0 0 3 4 0 0 0 1 0 0 14 1 1399.6467 B3KVY2;Q8NAK9;B3KUY1;Q53FN0;A0A024R8U5;Q01130 B3KVY2 182 195 SFRS2;SRSF2 Serine/arginine-rich splicing factor 2 yes no 2 0.013234 50.305 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2499 106 2726 4096 6604 6604 156 0 SPPLPAVIR RPSTEEPVRRPQRPRSPPLPAVIRNAPSRP RPQRPRSPPLPAVIRNAPSRPPSLPTPRPA R S P I R N 1 1 0 0 0 0 0 0 0 1 1 0 0 0 3 1 0 0 0 1 0 0 9 0 948.57565 Q9Y6X9 Q9Y6X9 615 623 MORC2 MORC family CW-type zinc finger protein 2 yes yes 2 0.0078123 44.203 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2500 969 2727 4097 6605;6606 6605 1761 0 SPPLSPVGTTPVK NHDLTHRKSPSGPVKSPPLSPVGTTPVKLK VKSPPLSPVGTTPVKLKRAAPKEEAEAMNN K S P V K L 0 0 0 0 0 0 0 1 0 0 1 1 0 0 4 2 2 0 0 2 0 0 13 0 1278.7184 C9J4K0;Q9BVC5 C9J4K0 147 159 C2orf49 Ashwin yes no 2 0.0036323 41.542 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2501 558 2728 4098 6607 6607 836;837 0 SPPPELTDTATSTK EESMTIDKNTKIPCKSPPPELTDTATSTKR KSPPPELTDTATSTKRCPKTRPRKEVKEEL K S P T K R 1 0 0 1 0 0 1 0 0 0 1 1 0 0 3 2 4 0 0 0 0 0 14 0 1443.7093 P46013 P46013 2588 2601 MKI67 Antigen KI-67 yes yes 2 8.9075E-16 110.44 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2502 762 2729 4099;4100 6608;6609;6610;6611;6612;6613;6614;6615;6616;6617 6609 1216 0 SPPPELTDTATSTKR EESMTIDKNTKIPCKSPPPELTDTATSTKR SPPPELTDTATSTKRCPKTRPRKEVKEELS K S P K R C 1 1 0 1 0 0 1 0 0 0 1 1 0 0 3 2 4 0 0 0 0 0 15 1 1599.8104 P46013 P46013 2588 2602 MKI67 Antigen KI-67 yes yes 2 0.00036232 54.598 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2503 762 2730 4101 6618 6618 1216 0 SPPPESMDTPTSTR EESTTDDKTTKIACKSPPPESMDTPTSTRR KSPPPESMDTPTSTRRRPKTPLGKRDIVEE K S P T R R 0 1 0 1 0 0 1 0 0 0 0 0 1 0 4 3 3 0 0 0 0 0 14 0 1501.6719 P46013 P46013 2105 2118 MKI67 Antigen KI-67 yes yes 2 0.0029847 47.037 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2504 762 2731 4102 6619;6620 6620 176 1207 0 SPPPESVDTPTSTK EESMTDEKTTKIACKSPPPESVDTPTSTKQ KSPPPESVDTPTSTKQWPKRSLRKADVEEE K S P T K Q 0 0 0 1 0 0 1 0 0 0 0 1 0 0 4 3 3 0 0 1 0 0 14 0 1441.6937 P46013 P46013 1131 1144 MKI67 Antigen KI-67 yes yes 2 1.4544E-30 102.28 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2505 762 2732 4103;4104 6621;6622;6623;6624;6625;6626;6627;6628 6622 1208 0 SPPSQSVQLNDSLSK RKLMPSPLKGQHTLKSPPSQSVQLNDSLSK SPPSQSVQLNDSLSKELQPIVYTPEDCRKA K S P S K E 0 0 1 1 0 2 0 0 0 0 2 1 0 0 2 5 0 0 0 1 0 0 15 0 1585.7948 B2R6H3;Q8NI77 B2R6H3 684 698 KIF18A Kinesin-like protein;Kinesin-like protein KIF18A yes no 2 1.3589E-128 171.08 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2506 404 2733 4105;4106 6629;6630;6631;6632 6630 601 0 SPPSVQSLAMR SCPSRAKMSMTGAGKSPPSVQSLAMRLLSM GAGKSPPSVQSLAMRLLSMPGAQGAAAAGS K S P M R L 1 1 0 0 0 1 0 0 0 0 1 0 1 0 2 3 0 0 0 1 0 0 11 0 1171.6019 A0A0G2JIS2;A0A024RCN9;B7Z852;A2ABF8;A0A0G2JIR1;A2ABF9;A0A0G2JK64;Q96KQ7 A0A0G2JIS2 140 150 EHMT2 Histone-lysine N-methyltransferase EHMT2 yes no 2 0.0059819 53.252 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2507 160 2734 4107 6633;6634 6634 34 221 0 SPPTTMLLPASPAK KVKASSVGVLSPQKKSPPTTMLLPASPAKA KSPPTTMLLPASPAKAPETEPIDVAAHLQL K S P A K A 2 0 0 0 0 0 0 0 0 0 2 1 1 0 4 2 2 0 0 0 0 0 14 0 1409.7588 Q2M3X1;B4DSN8;Q9UGU5 Q2M3X1 393 406 HMGXB4 HMG domain-containing protein 4 yes no 2 4.2101E-06 82.877 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2508 494 2735 4108 6635;6636 6635 94 727;728 0 SPQDEGLHLLK PAFRPVSLKSYSVEKSPQDEGLHLLKPLSI SVEKSPQDEGLHLLKPLSIPKRLGLPKPEG K S P L K P 0 0 0 1 0 1 1 1 1 0 3 1 0 0 1 1 0 0 0 0 0 0 11 0 1235.651 Q7RTP6 Q7RTP6 1371 1381 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 yes yes 2 0.00041231 74.987 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2509 867 2736 4109;4110 6637;6638;6639 6637 1443 0 SPQLSLSPRPASPK LALAGSPTPKNPEDKSPQLSLSPRPASPKA KSPQLSLSPRPASPKAQWPQSEDEGPLNLT K S P P K A 1 1 0 0 0 1 0 0 0 0 2 1 0 0 4 4 0 0 0 0 0 0 14 1 1463.8096 B9EGQ5;M0QXA7;O95785 B9EGQ5 187 200 WIZ Protein Wiz yes no 2 3.3286E-05 66.826 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2510 554 2737 4111 6640 6640 824;825;826 0 SPQPDPVDTPASTK DKPTTDEKTTKIACKSPQPDPVDTPASTKQ KSPQPDPVDTPASTKQRPKRNLRKADVEEE K S P T K Q 1 0 0 2 0 1 0 0 0 0 0 1 0 0 4 2 2 0 0 1 0 0 14 0 1438.694 P46013 P46013 2344 2357 MKI67 Antigen KI-67 yes yes 2 1.5248E-42 131.86 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2511 762 2738 4112;4113 6641;6642;6643;6644;6645 6645 1209 0 SPQPDPVGTPTIFKPQSK DKPTTHEKTTKIACRSPQPDPVGTPTIFKP PDPVGTPTIFKPQSKRSLRKADVEEESLAL R S P S K R 0 0 0 1 0 2 0 1 0 1 0 2 0 1 5 2 2 0 0 1 0 0 18 1 1923.0102 P46013 P46013 2223 2240 MKI67 Antigen KI-67 yes yes 2;3 6.7422E-11 70.091 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2512 762 2739 4114;4115 6646;6647 6646 1210;1975 0 SPQPESFK EESMTDDKITEVSCKSPQPESFKTSRSSKQ ITEVSCKSPQPESFKTSRSSKQRLKIPLVK K S P F K T 0 0 0 0 0 1 1 0 0 0 0 1 0 1 2 2 0 0 0 0 0 0 8 0 918.4447 P46013 P46013 2466 2473 MKI67 Antigen KI-67 yes yes 2 4.1227E-21 113.41 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 5721200 0 5721200 0 0 0 5721200 0 5721200 2513 762 2740;2741 4116;4117 6648;6649 6649 1220 1 SPQPVCSPAGSEGTPK GDSSTMRNAASFPLRSPQPVCSPAGSEGTP PQPVCSPAGSEGTPKGSRPPLILQSQSLPC R S P P K G 1 0 0 0 1 1 1 2 0 0 0 1 0 0 4 3 1 0 0 1 0 0 16 0 1597.7406 Q6IEH8;Q6KC79;A8K2T2;A6QL62 Q6IEH8 274 289 NIPBL Nipped-B-like protein yes no 2 0.00042644 44.998 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2514 856 2742 4118 6650 6650 1415 0 SPQQSAALPR EASAPKAALEPKESRSPQQSAALPRRYMLR PKESRSPQQSAALPRRYMLREREGAPEPAS R S P P R R 2 1 0 0 0 2 0 0 0 0 1 0 0 0 2 2 0 0 0 0 0 0 10 0 1053.5567 A0A0A6YYG7;Q6IBW4;E5RJN3 A0A0A6YYG7 284 293 NCAPH2 Condensin-2 complex subunit H2 yes no 2 0.00099778 67.252 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2515 230 2743 4119 6651 6651 326 0 SPQQTVPYVVPLSPK ______________________________ SPQQTVPYVVPLSPKLPKTKEYASEGEPLF R S P P K L 0 0 0 0 0 2 0 0 0 0 1 1 0 0 4 2 1 0 1 3 0 0 15 0 1638.8981 H0Y6S1;B4DRC2;B4DZR9;Q9UQR0 H0Y6S1 15 29 SCML2 Sex comb on midleg-like protein 2 yes no 2 1.4287E-05 68.168 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2516 492 2744 4120 6652;6653 6652 721;722 0 SPQVKPASTMGMGPLGK ALAAMNAAQVKPLGKSPQVKPASTMGMGPL QVKPASTMGMGPLGKGAGPVPPGKVGPATP K S P G K G 1 0 0 0 0 1 0 3 0 0 1 2 2 0 3 2 1 0 0 1 0 0 17 1 1684.864 E7ETY2;J3KQ96;Q13428;B4DRA2;Q59FZ2 E7ETY2 503 519 TCOF1 Treacle protein yes no 3 2.4083E-05 44.045 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2517 608 2745 4121 6654 6654 126;127 922 0 SPRITPPAAKPGSPQAK SAQGSSSPVPSMVQKSPRITPPAAKPGSPQ RITPPAAKPGSPQAKSLQPAVAEKQGHQWK K S P A K S 3 1 0 0 0 1 0 1 0 1 0 2 0 0 5 2 1 0 0 0 0 0 17 2 1701.9526 Q7Z3C4;A0A0A0MSW3;A0A024R8B6;P35658 Q7Z3C4 95 111 DKFZp686J0330;NUP214 Nuclear pore complex protein Nup214 yes no 3 0.0004634 41.703 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2518 102 2746 4122 6655 6655 142;1793 0 SPRPAGPQLFLPDPDPQR RRLAAAEETAVSPRKSPRPAGPQLFLPDPD PAGPQLFLPDPDPQRGGPGPGVRRRCPGES K S P Q R G 1 2 0 2 0 2 0 1 0 0 2 0 0 1 6 1 0 0 0 0 0 0 18 1 1987.0276 Q9BUH6 Q9BUH6 152 169 C9orf142 Protein PAXX yes yes 3 1.7613E-05 43.198 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2519 918 2747 4123 6656 6656 1591 0 SPSDLHISPLAK KMMGGAGPGSSLEARSPSDLHISPLAKKLP EARSPSDLHISPLAKKLPPPPGSPLGHSPT R S P A K K 1 0 0 1 0 0 0 0 1 1 2 1 0 0 2 3 0 0 0 0 0 0 12 0 1263.6823 B9EGQ5;M0QXA7;O95785;B3KR89 B9EGQ5 308 319 WIZ Protein Wiz yes no 2 7.373E-09 102.29 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2520 554 2748 4124;4125 6657;6658;6659;6660 6658 822;823 0 SPSDSSTASTPVAEQIER LDSHRRMAPTPIPTRSPSDSSTASTPVAEQ DSSTASTPVAEQIERALDEVTSSQPPPLPP R S P E R A 2 1 0 1 0 1 2 0 0 1 0 0 0 0 2 5 2 0 0 1 0 0 18 0 1860.8701 B3KSQ7;Q16643;B7Z2Z0;D6R9Q9 B3KSQ7 287 304 DBN1 Drebrin yes no 2 3.8266E-15 99.044 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2521 444 2749 4126 6661;6662 6662 648;649;650;1878 0 SPSEPLIPK DVKSQTILKPLSECKSPSEPLIPKRVGLIH PLSECKSPSEPLIPKRVGLIHISQVISEVD K S P P K R 0 0 0 0 0 0 1 0 0 1 1 1 0 0 3 2 0 0 0 0 0 0 9 0 966.5386 B2R935;A0A024R1S2;Q99741 B2R935 419 427 CDC6 Cell division control protein 6 homolog yes no 2 0.00058852 68.557 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2522 36 2750 4127 6663;6664 6663 34 0 SPTAALNESLVECPK QGETENREKVAASPKSPTAALNESLVECPK SPTAALNESLVECPKCNIQYPATEHRDLLV K S P P K C 2 0 1 0 1 0 2 0 0 0 2 1 0 0 2 2 1 0 0 1 0 0 15 0 1614.7923 Q53EZ4 Q53EZ4 428 442 CEP55 Centrosomal protein of 55 kDa yes yes 2 1.5881E-06 78.932 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2523 834 2751 4128;4129 6665;6666;6667 6665 1381;2002 0 SPTFSEELPVLGDGQQLR SQPLCNSHSNTQQSRSPTFSEELPVLGDGQ FSEELPVLGDGQQLRTNESLIQRKDIMTRI R S P L R T 0 1 0 1 0 2 2 2 0 0 3 0 0 1 2 2 1 0 0 1 0 0 18 0 1971.9902 B3KX77;Q8N0Z3 B3KX77 536 553 SPICE1 Spindle and centriole-associated protein 1 yes no 2 2.3821E-06 55.755 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2524 454 2752 4130 6668 6668 665 0 SPTPSPSPPR PSTNWSPAVPVKKAKSPTPSPSPPRNSDQE VKKAKSPTPSPSPPRNSDQEGGGKKKKKKK K S P P R N 0 1 0 0 0 0 0 0 0 0 0 0 0 0 5 3 1 0 0 0 0 0 10 0 1021.5193 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3 A0A0S2Z4W1 791 800 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.00075713 82.171 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2525 266 2753 4131 6669 6669 365 0 SPTPTLPLSTSSFDEQN MTQALRRKFQLAHPRSPTPTLPLSTSSFDE TPTLPLSTSSFDEQN_______________ R S P Q N - 0 0 1 1 0 1 1 0 0 0 2 0 0 1 3 4 3 0 0 0 0 0 17 0 1819.8476 D2SNZ4;Q96HE9 D2SNZ4 344 360 PRR11 Proline-rich protein 11 yes no 2 0.0022094 40.552 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2526 587 2754 4132 6670 6670 1906 0 SPVFSDEDSDLDFDISK MGERAENSSKSDLRKSPVFSDEDSDLDFDI VFSDEDSDLDFDISKLEQQSKVQNKGQGKP K S P S K L 0 0 0 5 0 0 1 0 0 1 1 1 0 2 1 4 0 0 0 1 0 0 17 0 1914.8371 O00566;B3KPV5;U3KQ48 O00566 163 179 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 yes no 2 4.011E-20 108.34 4 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2527 695 2755;2756 4133;4134;4135;4136;4137 6671;6672;6673;6674;6675;6676;6677;6678;6679 6672 1023;1024;1025 0 SPVGKSPPSTGSTYGSSQK GQFDHGSGSLSPSKKSPVGKSPPSTGSTYG KSPPSTGSTYGSSQKEESAASGGAAYTKRY K S P Q K E 0 0 0 0 0 1 0 3 0 0 0 2 0 0 3 6 2 0 1 1 0 0 19 1 1850.901 Q9Y2W1;Q7Z5U1;Q05D20;Q6P0P7;Q6PJV4 Q9Y2W1 315 333 THRAP3 Thyroid hormone receptor-associated protein 3 yes no 3 7.5389E-07 48.376 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2528 963 2757 4138 6680 6680 1744;1745 0 SPVSTRPLPSASQK TASAHLPAPAAVGRRSPVSTRPLPSASQKA RSPVSTRPLPSASQKAGENQEHRRAEVHKV R S P Q K A 1 1 0 0 0 1 0 0 0 0 1 1 0 0 3 4 1 0 0 1 0 0 14 1 1453.7889 Q8ND56 Q8ND56 216 229 LSM14A Protein LSM14 homolog A yes yes 2 0.010146 55.841 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2529 886 2758 4139 6681;6682 6681 1489 0 SPYQEFTDHLVK SYLTPDLWKETVFTKSPYQEFTDHLVKTHT FTKSPYQEFTDHLVKTHTRVSVQRTQAPAV K S P V K T 0 0 0 1 0 1 1 0 1 0 1 1 0 1 1 1 1 0 1 1 0 0 12 0 1462.7092 H0YEN5;Q8J014;Q8N5L9;Q3KQT6;P15880;A4D0Y7;O60249;Q8NI62;Q9BSW5;E9PQD7 H0YEN5 166 177 RPS2;rps2;LOC392781;OK/KNS-cl.6 40S ribosomal protein S2 yes no 3 0.021402 31.708 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 7160600 7160600 0 0 0 0 7160600 7160600 0 2530 654 2759 4140 6683 6683 1 SQAPLESSLDSLGDVFLDSGRK VESLESLYFTPIPARSQAPLESSLDSLGDV SLDSLGDVFLDSGRKTRSARRRTTQIINIT R S Q R K T 1 1 0 3 0 1 1 2 0 0 4 1 0 1 1 5 0 0 0 1 0 0 22 1 2320.1547 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q59HB8;Q96HN5;H0YFY6;Q7Z757 A0A087WY61 1766 1787 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 yes no 3 0.00014553 45.137 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2531 71 2760 4141 6684 6684 91;92;93 0 SQASPSEDEETFELR RVPDNSLLEATSRSRSQASPSEDEETFELR SQASPSEDEETFELRDRVRRIHVKRYSTYD R S Q L R D 1 1 0 1 0 1 4 0 0 0 1 0 0 1 1 3 1 0 0 0 0 0 15 0 1723.7537 Q13829 Q13829 275 289 TNFAIP1 BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2 yes yes 2 8.2835E-06 68.257 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2532 810 2761 4142 6685;6686 6685 1329 0 SQAVEKPPSEKPR SATRTRRSASQAGSKSQAVEKPPSEKPRLR SKSQAVEKPPSEKPRLRRSSPRAQEEGPGE K S Q P R L 1 1 0 0 0 1 2 0 0 0 0 2 0 0 3 2 0 0 0 1 0 0 13 2 1451.7732 Q7Z7K6;A0A0M3HER2 Q7Z7K6 53 65 CENPV Centromere protein V no no 3 0.0093272 29.013 1 0.52301 0.74332 NaN 1 Median NaN NaN NaN 0 0 Median 0.52301 0.74332 NaN 1 0 Median 23793000 13984000 9809100 0 0 0 23793000 13984000 9809100 2533 871;260 2762 4143 6687 6687 1 SQDVELWEGEVVK VDNTFAEEFTTQNQKSQDVELWEGEVVKEL QKSQDVELWEGEVVKELSVEEQIKRNRYYD K S Q V K E 0 0 0 1 0 1 3 1 0 0 1 1 0 0 0 1 0 1 0 3 0 0 13 0 1516.7409 B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2;F8VQE1 B4DN52 645 657 LIMA1 LIM domain and actin-binding protein 1 yes no 2 0.00061903 67.385 2 0.6516 0.78633 NaN 1 Median 0.6516 0.78633 NaN 1 0 Median NaN NaN NaN 0 0 Median 3333300 2006400 1327000 3333300 2006400 1327000 0 0 0 2534 485 2763;2764 4144;4145 6688;6689;6690 6689 706 2 SQEPIPDDQKVSDDDK EWGNWVDEERASLLKSQEPIPDDQKVSDDD QEPIPDDQKVSDDDKEKGEGALPTGKSKKK K S Q D K E 0 0 0 5 0 2 1 0 0 1 0 2 0 0 2 2 0 0 0 1 0 0 16 1 1814.817 H0YBJ8;E5RJU9;A0A024R9D2;Q86UE4 H0YBJ8 85 100 MTDH Protein LYRIC yes no 2 0.00012832 65.225 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2535 114 2765 4146 6691 6691 168 0 SQEPIPDDQKVSDDDKEK EWGNWVDEERASLLKSQEPIPDDQKVSDDD PIPDDQKVSDDDKEKGEGALPTGKSKKKKK K S Q E K G 0 0 0 5 0 2 2 0 0 1 0 3 0 0 2 2 0 0 0 1 0 0 18 2 2071.9546 H0YBJ8;E5RJU9;A0A024R9D2;Q86UE4 H0YBJ8 85 102 MTDH Protein LYRIC yes no 3 1.6301E-06 53.201 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2536 114 2766 4147 6692;6693 6693 168 0 SQEPIPDDQKVSDDDKEKGEGALPTGK EWGNWVDEERASLLKSQEPIPDDQKVSDDD DDDKEKGEGALPTGKSKKKKKKKKKQGEDN K S Q G K S 1 0 0 5 0 2 3 3 0 1 1 4 0 0 3 2 1 0 0 1 0 0 27 3 2882.3781 H0YBJ8;E5RJU9;A0A024R9D2;Q86UE4 H0YBJ8 85 111 MTDH Protein LYRIC yes no 4 2.3959E-09 42.865 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2537 114 2767 4148 6694 6694 168 0 SQIHDIVLVGGSTR LDPVEKALRDAKLDKSQIHDIVLVGGSTRI KSQIHDIVLVGGSTRIPKIQKLLQDFFNGK K S Q T R I 0 1 0 1 0 1 0 2 1 2 1 0 0 0 0 2 1 0 0 2 0 0 14 0 1480.7998 E9PKE3;V9HW22;Q53GZ6;P11142;B3KTV0;Q53HF2;E9PNE6;Q96IS6;E9PN89;A8K7Q2;B4E1Q1 E9PKE3 310 323 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein yes no 3 0.0060711 28.58 1 1.3445 1.767 NaN 1 Median NaN NaN NaN 0 0 Median 1.3445 1.767 NaN 1 0 Median 25795000 11601000 14194000 0 0 0 25795000 11601000 14194000 2538 623 2768 4149 6695 6695 1 SQSAFDLKK SLEDALAEAQRVNTKSQSAFDLKKKNLACE QRVNTKSQSAFDLKKKNLACEESKRKELEK K S Q K K K 1 0 0 1 0 1 0 0 0 0 1 2 0 1 0 2 0 0 0 0 0 0 9 1 1022.5397 B7ZLZ7;A0A024R158;O95347;A8K984;B3KMB1;Q2KQ72;Q05BV1;Q6IPS5;Q7Z2X1 B7ZLZ7 313 321 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 yes no 2 0.012135 51.193 1 0.66218 0.82561 NaN 1 Median NaN NaN NaN 0 0 Median 0.66218 0.82561 NaN 1 0 Median 12340000 6780000 5560300 0 0 0 12340000 6780000 5560300 2539 27 2769 4150 6696 6696 1 SQSLPNSLDYTQTSDPGR LLYSQRWKRTQRHGRSQSLPNSLDYTQTSD LPNSLDYTQTSDPGRHVMLLRAVPGGAGDA R S Q G R H 0 1 1 2 0 2 0 1 0 0 2 0 0 0 2 4 2 0 1 0 0 0 18 0 1964.9076 H0YNE5;H0YLG5;A0A024R9P6;Q96TC7 H0YNE5 44 61 RMDN3;FAM82C Regulator of microtubule dynamics protein 3 yes no 2 1.261E-23 107.98 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2540 120 2770 4151 6697;6698;6699 6699 171 0 SQSRSNSPLPVPPSK KENGKGDIKSKSRSRSQSRSNSPLPVPPSK SQSRSNSPLPVPPSKARSVSPPPKRATSRS R S Q S K A 0 1 1 0 0 1 0 0 0 0 1 1 0 0 4 5 0 0 0 1 0 0 15 1 1579.8318 V9HVZ0;A8K588;Q13247 V9HVZ0 297 311 HEL-S-91;SRSF6 Serine/arginine-rich splicing factor 6 yes no 2 0.00016325 54.812 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2541 362 2771 4152 6700;6701 6701 556;557;558;559 0 SQTTTERDSDTDVEEEELPVENR DAEEDMPQRVVLLQRSQTTTERDSDTDVEE SDTDVEEEELPVENREAVLKDHTKIRALVR R S Q N R E 0 2 1 3 0 1 6 0 0 0 1 0 0 0 1 2 4 0 0 2 0 0 23 1 2678.1791 B4DYH4;Q14676 B4DYH4 317 339 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 3 4.4888E-10 53.342 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2542 508 2772 4153 6702 6702 1890 0 SQVAELNDDDKDDEIVFK GPTPVCTPTFLERRKSQVAELNDDDKDDEI AELNDDDKDDEIVFKQPISCVKEEIQETQT K S Q F K Q 1 0 1 5 0 1 2 0 0 1 1 2 0 1 0 1 0 0 0 2 0 0 18 1 2078.9644 Q9BYG3;H7BZL0;C9J808 Q9BYG3 247 264 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein yes no 3 0.00026748 38.417 1 1 0.8952 1.0946 10.047 2 Median 0.9565 1.1752 NaN 1 0 Median 0.83782 1.0196 NaN 1 0 Median 53329000 30735000 22594000 20563000 10908000 9655400 32766000 19827000 12938000 2543 922 2773 4154;4155 6703;6704 6703 2 SQVFSTAADGQTQVEIK FTKLINRNTTIPTKKSQVFSTAADGQTQVE VFSTAADGQTQVEIKVCQGEREMAGDNKLL K S Q I K V 2 0 0 1 0 3 1 1 0 1 0 1 0 1 0 2 2 0 0 2 0 0 17 0 1807.8952 A1XP52;B7Z1V7;B7Z4T3;B7Z4V2;V9HW84;Q8N1C8;P38646 A1XP52 136 152 HEL-S-124m;HSPA9 Stress-70 protein, mitochondrial yes no 2 9.3099E-08 82.34 1 0.45729 0.54272 NaN 1 Median 0.45729 0.54272 NaN 1 0 Median NaN NaN NaN 0 0 Median 8072200 5002000 3070200 8072200 5002000 3070200 0 0 0 2544 301 2774 4156 6705 6705 1 SQWSLLSEK EHPDASGEEIEELLRSQWSLLSEKQRARYN IEELLRSQWSLLSEKQRARYNTKFALVAPV R S Q E K Q 0 0 0 0 0 1 1 0 0 0 2 1 0 0 0 3 0 1 0 0 0 0 9 0 1076.5502 Q05CW4;H0Y9L4;O96028 O96028 489 497 WHSC1 Histone-lysine N-methyltransferase NSD2 no no 2 0.0031166 56.087 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2545 724;800 2775 4157;4158 6706;6707 6707 1111 0 SQYEQLAEQNR AAPGVDLTQLLNNMRSQYEQLAEQNRKDAE NNMRSQYEQLAEQNRKDAEAWFNEKSKELT R S Q N R K 1 1 1 0 0 3 2 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 11 0 1364.6321 CON__P13645;P13645 CON__P13645 323 333 KRT10 Keratin, type I cytoskeletal 10 yes no 2 0.019496 38.634 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3337800 3337800 0 0 0 0 3337800 3337800 0 + 2546 579 2776 4159 6708 6708 1 SQYEQLAEQNRK AAPGVDLTQLLNNMRSQYEQLAEQNRKDAE NMRSQYEQLAEQNRKDAEAWFNEKSKELTT R S Q R K D 1 1 1 0 0 3 2 0 0 0 1 1 0 0 0 1 0 0 1 0 0 0 12 1 1492.727 CON__P13645;P13645 CON__P13645 323 334 KRT10 Keratin, type I cytoskeletal 10 yes no 2;3 1.1288E-25 101.45 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 182730000 182730000 0 0 0 0 182730000 182730000 0 + 2547 579 2777 4160;4161 6709;6710;6711 6711 3 SRDSFLK AKRINVRIEHIKHSKSRDSFLKRVKENDQK IEHIKHSKSRDSFLKRVKENDQKKKEAKEK K S R L K R 0 1 0 1 0 0 0 0 0 0 1 1 0 1 0 2 0 0 0 0 0 0 7 1 851.45012 Q6IAX2;P46778;M0R181 Q6IAX2 101 107 RPL21 60S ribosomal protein L21 yes no 2 0.018122 46.129 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2548 764 2778 4162 6712 6712 1 SREDAGDNDDTEGAIGVR FARMELREHGEKKKRSREDAGDNDDTEGAI DAGDNDDTEGAIGVRNKVAGGKMKKRKGR_ R S R V R N 2 2 1 4 0 0 2 3 0 1 0 0 0 0 0 1 1 0 0 1 0 0 18 1 1875.8195 Q53GJ1;Q9H4E3;A0A024RAS3;Q9H0S4;Q7Z4B1 Q53GJ1 417 434 E4-DBP;hCG_27698;DDX47;MST162 Probable ATP-dependent RNA helicase DDX47 yes no 3 9.6623E-08 64.705 1 0.38684 0.66436 NaN 1 Median NaN NaN NaN 0 0 Median 0.38684 0.66436 NaN 1 0 Median 39779000 30122000 9657600 0 0 0 39779000 30122000 9657600 2549 133 2779 4163 6713;6714 6713 2 SREDSPELNPPPGIEDNR TPLHPPTPPILSTDRSREDSPELNPPPGIE DSPELNPPPGIEDNRQCALCLTYGDDSAND R S R N R Q 0 2 2 2 0 0 3 1 0 1 1 0 0 0 4 2 0 0 0 0 0 0 18 1 2020.945 Q03164 Q03164 1854 1871 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes yes 3 2.6549E-05 40.962 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2550 798 2780 4164 6715 6715 1295;1296 0 SRESNKPRPSELSR PELLGLEAGSRRQARSRESNKPRPSELSRM RSRESNKPRPSELSRMSAAQRQQLLEEERT R S R S R M 0 3 1 0 0 0 2 0 0 0 1 1 0 0 2 4 0 0 0 0 0 0 14 3 1641.8547 Q9NSI2 Q9NSI2 167 180 FAM207A Protein FAM207A yes yes 4 0.0089304 18.015 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 7168800 7168800 0 7168800 7168800 0 0 0 0 2551 937 2781 4165 6716 6716 1 SRKQSEELQSVQAQEGALGTK GVLAHLERLETQVSRSRKQSEELQSVQAQE ELQSVQAQEGALGTKIHKLRRLRDELRAVV R S R T K I 2 1 0 0 0 4 3 2 0 0 2 2 0 0 0 3 1 0 0 1 0 0 21 2 2273.1612 Q9BU64 Q9BU64 31 51 CENPO Centromere protein O yes yes 3 2.7305E-10 55.588 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2552 917 2782 4166 6717 6717 1588;1589 0 SRLDQELK VCRKTYVTPRRPFEKSRLDQELKLIGEYGL PRRPFEKSRLDQELKLIGEYGLRNKREVWR K S R L K L 0 1 0 1 0 1 1 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 8 1 987.53491 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;F2Z3C0;A8MXK4 A0A024R4M0 23 30 RPS9 40S ribosomal protein S9 yes no 2 0.014198 61.999 1 1 0.62937 0.90759 17.055 2 Median 0.78822 1.0239 NaN 1 0 Median 0.50253 0.80448 NaN 1 0 Median 221940000 141880000 80059000 14940000 8390400 6549600 207000000 133490000 73509000 2553 62 2783 4167;4168 6718;6719 6718 2 SRLEVAEAEEEETSIK IDKSRKLPHSKAKTRSRLEVAEAEEEETSI RLEVAEAEEEETSIKAARSEQLLAEEPGFL R S R I K A 2 1 0 0 0 0 6 0 0 1 1 1 0 0 0 2 1 0 0 1 0 0 16 1 1818.8847 B4DP15;B4DNI0;B0UZZ8;A8K806;O15213;H0Y6G3;A0A140T9L0;A0A0G2JJL1 B4DP15 76 91 C6orf11;WDR46 WD repeat-containing protein 46 yes no 3 2.2553E-06 64.52 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 6215600 2531900 3683800 2531900 2531900 0 3683800 0 3683800 2554 372 2784 4169;4170 6720;6721 6720 2 SRLGGSLEESK S R S K 0 1 0 0 0 0 2 2 0 0 2 1 0 0 0 3 0 0 0 0 0 0 11 1 1161.599 REV__B4E1U3 yes yes 2 0.029792 58.676 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 + 2555 983 2785 4171 6722 6722 1769;1770 0 SRLTPVSPESSSTEEK LGIEVDIDVEHGGKRSRLTPVSPESSSTEE RLTPVSPESSSTEEKSSSQPSSCCSDPSKP R S R E K S 0 1 0 0 0 0 3 0 0 0 1 1 0 0 2 5 2 0 0 1 0 0 16 1 1732.8479 E7EMC7;Q13501;B4E3V2 E7EMC7 266 281 SQSTM1 Sequestosome-1 yes no 2 0.0019822 43.791 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2556 605 2786 4172 6723 6723 901;1917 0 SRPFTVAASFQSTSVK LDLKKLRRSSSLKERSRPFTVAASFQSTSV RPFTVAASFQSTSVKSPKTVSPPIRKGWSM R S R V K S 2 1 0 0 0 1 0 0 0 0 0 1 0 2 1 4 2 0 0 2 0 0 16 1 1711.8893 B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2;F8VQE1 B4DN52 507 522 LIMA1 LIM domain and actin-binding protein 1 yes no 3 0.0058568 41.412 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2557 485 2787 4173 6724 6724 1 SRSPLAIR RSRSRTPLLPRKRSRSRSPLAIRRRSRSRT LPRKRSRSRSPLAIRRRSRSRTPRTARGKR R S R I R R 1 2 0 0 0 0 0 0 0 1 1 0 0 0 1 2 0 0 0 0 0 0 8 1 898.53485 A0A140VK53;Q9UQ35;O60382 A0A140VK53 2044 2051 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 yes no 2 6.7865E-15 106.4 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2558 284 2788;2789 4174;4175 6725;6726 6726 416;417 0 SRSPLELEPEAK TQKTSEIVLRPRNKRSRSPLELEPEAKKLC NKRSRSPLELEPEAKKLCAKGSDHTDMERP R S R A K K 1 1 0 0 0 0 3 0 0 0 2 1 0 0 2 2 0 0 0 0 0 0 12 1 1354.7092 A0A087WTQ7;A0A087WV56;A0A087WW71;A0A087X0X5;Q92466 A0A087WTQ7 24 35 DDB2 DNA damage-binding protein 2 yes no 2 0.00065993 60.196 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2559 180 2790 4176 6727;6728 6727 246;247 0 SRVFDLQFSTDSPR FPQNDDEKERLQRRRSRVFDLQFSTDSPRL RSRVFDLQFSTDSPRLLASPSSRSIDISAT R S R P R L 0 2 0 2 0 1 0 0 0 0 1 0 0 2 1 3 1 0 0 1 0 0 14 1 1653.8111 B4DRG7;E9PHA2;A8K4T8;Q15003;C9J470;C9JZP1 B4DRG7 46 59 NCAPH Condensin complex subunit 2 yes no 2 7.124E-05 63.682 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2560 354 2791;2792 4177;4178 6729;6730;6731;6732 6732 543;544;1852 0 SSDAFTTQHALR VEQEAQVETSPETSRSSDAFTTQHALRQAQ TSRSSDAFTTQHALRQAQMSKELVELNKAL R S S L R Q 2 1 0 1 0 1 0 0 1 0 1 0 0 1 0 2 2 0 0 0 0 0 12 0 1332.6422 Q59HG1;O95239;Q6PKB2 Q59HG1 510 521 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A yes no 2;3 0.00025122 73.499 2 0.60375 0.80478 1.8336 2 Median NaN NaN NaN 0 0 Median 0.60375 0.80478 1.8336 2 0 Median 60042000 37741000 22301000 0 0 0 60042000 37741000 22301000 2561 717 2793 4179;4180 6733;6734 6734 2 SSDQPLTVPVSPK HKANPIRKYQGLEIKSSDQPLTVPVSPKFS IKSSDQPLTVPVSPKFSTRFHC________ K S S P K F 0 0 0 1 0 1 0 0 0 0 1 1 0 0 3 3 1 0 0 2 0 0 13 0 1353.714 B3KM90;Q643R0;Q9ULW0;Q96FC3 B3KM90 586 598 HCTP4;TPX2 Targeting protein for Xklp2 yes no 2 2.2692E-05 85.287 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2562 427 2794 4181;4182 6735;6736;6737;6738;6739;6740 6737 631 0 SSDYQFPSSPFTDTLK QEAFPNDPRVINRQRSSDYQFPSSPFTDTL SDYQFPSSPFTDTLKGTTEDDVLTGQVEEQ R S S L K G 0 0 0 2 0 1 0 0 0 0 1 1 0 2 2 4 2 0 1 0 0 0 16 0 1818.8312 Q9UK61 Q9UK61 971 986 FAM208A Protein FAM208A yes yes 2 0.00033589 48.216 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2563 954 2795 4183 6741;6742 6741 1713 0 SSENILTVHEQANVESLK PNFYNNDFDDDFSHRSSENILTVHEQANVE NILTVHEQANVESLKETKQNCKDLDEDANG R S S L K E 1 0 2 0 0 1 3 0 1 1 2 1 0 0 0 3 1 0 0 2 0 0 18 0 1997.0065 J3KP30;B7Z854;Q5QJE6 J3KP30 273 290 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 yes no 3 0.0087354 22.313 1 0.73165 0.91178 NaN 1 Median NaN NaN NaN 0 0 Median 0.73165 0.91178 NaN 1 0 Median 33372000 18744000 14628000 0 0 0 33372000 18744000 14628000 2564 545 2796 4184 6743;6744 6743 2 SSFSQHAR GSVTKKRKLESTESRSSFSQHARTSGRVAV LESTESRSSFSQHARTSGRVAVEEVDEEGK R S S A R T 1 1 0 0 0 1 0 0 1 0 0 0 0 1 0 3 0 0 0 0 0 0 8 0 918.43078 P02545;W8QEH3;Q5I6Y5;Q8N519;Q3BDU5;Q5TCI8;A0A0C4DGC5;B4DFR3 P02545 428 435 LMNA Prelamin-A/C;Lamin-A/C yes no 2;3 1.8269E-49 139.31 2 1.6824 2.2794 9.7721 2 Median NaN NaN NaN 0 0 Median 1.6824 2.2794 9.7721 2 0 Median 50691000 18441000 32250000 0 0 0 50691000 18441000 32250000 2565 725 2797 4185;4186 6745;6746;6747 6746 3 SSFSSDPDESEGIPLK PRKIREQEPARRVSRSSFSSDPDESEGIPL SFSSDPDESEGIPLKRRRVSFGGHLRPELF R S S L K R 0 0 0 2 0 0 2 1 0 1 1 1 0 1 2 5 0 0 0 0 0 0 16 0 1693.7683 Q70L73 Q70L73 62 77 MKI67 yes yes 2 1.1376E-46 131.96 3 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2566 865 2798;2799;2800 4187;4188;4189;4190;4191 6748;6749;6750;6751;6752;6753 6748 1437;1438;1439;1440 0 SSGEIVYCGQVFEK ASGTLREYKLKKMKKSSGEIVYCGQVFEKS KSSGEIVYCGQVFEKSPLRVKNFGIWLRYD K S S E K S 0 0 0 0 1 1 2 2 0 1 0 1 0 1 0 2 0 0 1 2 0 0 14 0 1601.7396 M0R0P7;M0R3D6;M0R1A7;M0R117;B4DM74;B2R4C0;Q02543;B4DM94;B4DUV3;Q53HD3 M0R0P7 18 31 RPL18A 60S ribosomal protein L18a yes no 2 2.0846E-31 125.72 1 0.73689 0.87224 NaN 1 Median 0.73689 0.87224 NaN 1 0 Median NaN NaN NaN 0 0 Median 151230000 87356000 63871000 151230000 87356000 63871000 0 0 0 2567 397 2801 4192 6754;6755;6756 6755 3 SSGEIVYCGQVFEKSPLR ASGTLREYKLKKMKKSSGEIVYCGQVFEKS EIVYCGQVFEKSPLRVKNFGIWLRYDSRSG K S S L R V 0 1 0 0 1 1 2 2 0 1 1 1 0 1 1 3 0 0 1 2 0 0 18 1 2055.0095 M0R0P7;M0R3D6;M0R1A7;M0R117;B4DM74;B2R4C0;Q02543;B4DM94;B4DUV3;Q53HD3 M0R0P7 18 35 RPL18A 60S ribosomal protein L18a yes no 3 8.5467E-66 138.04 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2568 397 2802 4193 6757 6757 594 0 SSGSETEQVVDFSDR PTPVTPKKYPLRQTRSSGSETEQVVDFSDR SSGSETEQVVDFSDRETKNTADHDESPPRT R S S D R E 0 1 0 2 0 1 2 1 0 0 0 0 0 1 0 4 1 0 0 2 0 0 15 0 1641.7118 O95251 O95251 99 113 KAT7 Histone acetyltransferase KAT7 yes yes 2 1.5859E-06 75.695 2 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2569 718 2803;2804 4194;4195;4196;4197;4198 6758;6759;6760;6761;6762;6763 6760 1093;1094;1095 0 SSGVIPPLSSK S S S K 0 0 0 0 0 0 0 1 0 1 1 1 0 0 2 4 0 0 0 1 0 0 11 0 1070.5972 REV__Q9UHG0 yes no 2 0.00096335 84.498 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 + 2570 970 2805 4199;4200;4201;4202 6764;6765;6766;6767;6768 6765 1762;1763 0 SSHYDELLAAEAR GLATVIRYRQDDDQRSSHYDELLAAEARAI QRSSHYDELLAAEARAIKNGKGLHSKKEVP R S S A R A 3 1 0 1 0 0 2 0 1 0 2 0 0 0 0 2 0 0 1 0 0 0 13 0 1460.6896 B2R5U1;B4E299;B3KU67;A0A140VK49;Q59FF0;I6TRR8;Q7KZF4;H7C597 B2R5U1 448 460 SND1 Staphylococcal nuclease domain-containing protein 1 yes no 3 0.012891 24.558 1 2.4517 3.2805 NaN 1 Median NaN NaN NaN 0 0 Median 2.4517 3.2805 NaN 1 0 Median 9941200 2324600 7616600 0 0 0 9941200 2324600 7616600 2571 283 2806 4203 6769 6769 1 SSIIIKPSDPVER ADGPLKNRPETVVSRSSIIIKPSDPVERNS SRSSIIIKPSDPVERNSHAPPAETIRWKSH R S S E R N 0 1 0 1 0 0 1 0 0 3 0 1 0 0 2 3 0 0 0 1 0 0 13 1 1439.7984 A0A024RAC0;Q86V48 A0A024RAC0 877 889 LUZP1 Leucine zipper protein 1 yes no 2 0.004174 42.789 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2572 127 2807 4204 6770 6770 184;185 0 SSISETLSGTDTFSSSNNHEK EPLQVSFAVLSSPNKSSISETLSGTDTFSS LSGTDTFSSSNNHEKISSPKVGRITRTSNR K S S E K I 0 0 2 1 0 0 2 1 1 1 1 1 0 1 0 7 3 0 0 0 0 0 21 0 2226.9877 E9PEI0;Q69YH5;A8K8Z0;B7Z5Q5 E9PEI0 459 479 CDCA2 Cell division cycle-associated protein 2 yes no 3 5.0658E-12 48.656 1 0.85457 1.0557 NaN 1 Median 0.85457 1.0557 NaN 1 0 Median NaN NaN NaN 0 0 Median 23664000 13986000 9678500 23664000 13986000 9678500 0 0 0 2573 615 2808 4205 6771;6772 6771 2 SSITLSMK S S M K 0 0 0 0 0 0 0 0 0 1 1 1 1 0 0 3 1 0 0 0 0 0 8 0 865.4579 REV__L8E799 yes yes 2 0.029855 47.743 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 23664000 0 23664000 23664000 0 23664000 0 0 0 + 2574 984 2809 4206 6773 6773 235 1 SSLGQSASETEEDTVSVSK MNSQQEEEEMETDARSSLGQSASETEEDTV QSASETEEDTVSVSKKEKNRKRRNRKKKKK R S S S K K 1 0 0 1 0 1 3 1 0 0 1 1 0 0 0 6 2 0 0 2 0 0 19 0 1939.8858 E9PJ04;H0YCG1;Q7Z3K9;E9PPJ0;Q13435 E9PJ04 300 318 SF3B2;DKFZp781L0540 Splicing factor 3B subunit 2 yes no 2 1.9482E-11 85.937 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 4011600 2486200 1525400 4011600 2486200 1525400 0 0 0 2575 619 2810;2811;2812 4207;4208;4209 6774;6775;6776;6777 6776 943;944 1 SSLGSLQTPEAVTTR ARRKTVFSPTLPAARSSLGSLQTPEAVTTR SSLGSLQTPEAVTTRKGTGLLSSDYRIING R S S T R K 1 1 0 0 0 1 1 1 0 0 2 0 0 0 1 3 3 0 0 1 0 0 15 0 1545.7999 A8K9U6;Q7Z2W4;Q05DV5;C9J6P4 A8K9U6 386 400 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 2 0.0013739 45.915 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2576 380 2813 4210 6778 6778 580;581 0 SSPEETLNELTGR NNENVAPFHSELTEKSSPEETLNELTGRLS EKSSPEETLNELTGRLSNNHQCKFCSRHFC K S S G R L 0 1 1 0 0 0 3 1 0 0 2 0 0 0 1 2 2 0 0 0 0 0 13 0 1431.6842 Q5SVQ8 Q5SVQ8 190 202 ZBTB41 Zinc finger and BTB domain-containing protein 41 yes yes 2 0.0065012 42.843 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2577 843 2814 4211 6779 6779 1393;1394 0 SSPELEDTATSSK EESMTDDKTTKIPCKSSPELEDTATSSKRR CKSSPELEDTATSSKRRPRTRAQKVEVKEE K S S S K R 1 0 0 1 0 0 2 0 0 0 1 1 0 0 1 4 2 0 0 0 0 0 13 0 1350.6151 P46013 P46013 2827 2839 MKI67 Antigen KI-67 yes yes 2 2.2854E-122 166.48 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2578 762 2815 4212;4213 6780;6781;6782;6783;6784;6785 6785 1217;1218 0 SSPGAGPSDHHSASRDER QLIHDPVSPRGMVTRSSPGAGPSDHHSASR GAGPSDHHSASRDERFKRRQLLRLQATERT R S S E R F 2 2 0 2 0 0 1 2 2 0 0 0 0 0 2 5 0 0 0 0 0 0 18 1 1848.8099 I3VM54;I3VM53;Q9Y2K7;B4DSG1 I3VM54 722 739 KDM2A Lysine-specific demethylase 2A yes no 3 0.017551 21.045 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1826900 1826900 0 1826900 1826900 0 0 0 0 2579 677 2816 4214 6786 6786 1 SSPLEVLESAACEK ITFTCPRTPSELINKSSPLEVLESAACEKL KSSPLEVLESAACEKLPTPTPQVVKEGDSF K S S E K L 2 0 0 0 1 0 3 0 0 0 2 1 0 0 1 3 0 0 0 1 0 0 14 0 1518.7236 E7EVA0;B5MEG9;Q86Y04 E7EVA0 1446 1459 MAP4 Microtubule-associated protein yes no 2 0.00020439 64.104 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2580 609 2817 4215 6787 6787 925;926 0 SSPLLNYNTGVYR RPEIKSATMGNSYGRSSPLLNYNTGVYRSY GRSSPLLNYNTGVYRSYQPNENKFRGFMQK R S S Y R S 0 1 2 0 0 0 0 1 0 0 2 0 0 0 1 2 1 0 2 1 0 0 13 0 1482.7467 Q5T0W9 Q5T0W9 975 987 FAM83B Protein FAM83B yes yes 2 0.0040223 51.211 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2581 844 2818 4216 6788 6788 1395;1396 0 SSPQAAVPYK KPQPKVQEKADIPVKSSPQAAVPYKKDVGK DIPVKSSPQAAVPYKKDVGKTLCPLCFSIL K S S Y K K 2 0 0 0 0 1 0 0 0 0 0 1 0 0 2 2 0 0 1 1 0 0 10 0 1046.5397 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 607 616 ADNP Activity-dependent neuroprotector homeobox protein yes no 2 4.0418E-05 91.701 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2582 413 2819 4217;4218 6789;6790;6791;6792;6793;6794 6793 610;611 0 SSPQAAVPYKK KPQPKVQEKADIPVKSSPQAAVPYKKDVGK IPVKSSPQAAVPYKKDVGKTLCPLCFSILK K S S K K D 2 0 0 0 0 1 0 0 0 0 0 2 0 0 2 2 0 0 1 1 0 0 11 1 1174.6346 Q6DHZ8;B2RBM8;Q9H2P0 Q6DHZ8 607 617 ADNP Activity-dependent neuroprotector homeobox protein yes no 2 5.0545E-06 97.911 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2583 413 2820 4219;4220 6795;6796;6797;6798 6795 610;611 0 SSPSILAVQR VQAKPPKVDGAEFWKSSPSILAVQRSAILK AEFWKSSPSILAVQRSAILKKQQQQQQQQQ K S S Q R S 1 1 0 0 0 1 0 0 0 1 1 0 0 0 1 3 0 0 0 1 0 0 10 0 1056.5928 O14646;Q7Z4M7 O14646 89 98 CHD1 Chromodomain-helicase-DNA-binding protein 1 yes no 2 0.0019398 64.73 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2584 696 2821 4221;4222 6799;6800;6801;6802 6799 1027;1028 0 SSPSVLIHSLGK PSLGKPGETSPPDSKSSPSVLIHSLGKSTT DSKSSPSVLIHSLGKSTTDNDVRIQQLQEI K S S G K S 0 0 0 0 0 0 0 1 1 1 2 1 0 0 1 4 0 0 0 1 0 0 12 0 1223.6874 B4DNL3;Q9P0K7 B4DNL3 193 204 RAI14 Ankycorbin yes no 2 0.0033508 50.284 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2585 486 2822 4223 6803 6803 708;709 0 SSQQPSTPQQAPPGQPQQGTFVAHK STQPPKSAKPPAGGKSSQQPSTPQQAPPGQ APPGQPQQGTFVAHKEIKLTLLNKAADKGS K S S H K E 2 0 0 0 0 7 0 2 1 0 0 1 0 1 5 3 2 0 0 1 0 0 25 0 2630.2837 E7ERS3;B4DTK7;Q86VM9;H3BRH3;B3KRL4 E7ERS3 814 838 ZC3H18;NHN1 Zinc finger CCCH domain-containing protein 18 yes no 3 2.9007E-09 46.307 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2586 498 2823 4224 6804;6805 6804 732;1886 0 SSRFSGGFGAR AYEHHYKGSSRGRSKSSRFSGGFGARDYRQ GRSKSSRFSGGFGARDYRQSSGASSSSFSS K S S A R D 1 2 0 0 0 0 0 3 0 0 0 0 0 2 0 3 0 0 0 0 0 0 11 1 1127.5472 A0A0D9SFB3;A0A0D9SG12;B5BTY4;Q59GX6;A0A0D9SF53;O00571;Q5S4N1;B4DLU5;A0A087WVZ1 A0A0D9SFB3 590 600 DDX3X ATP-dependent RNA helicase DDX3X yes no 2 0.027114 49.448 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2587 249 2824 4225 6806 6806 348 0 SSSEDAESLAPR EASSLPEVRTGKRKRSSSEDAESLAPRSKV RKRSSSEDAESLAPRSKVKKIIQKDIIKEA R S S P R S 2 1 0 1 0 0 2 0 0 0 1 0 0 0 1 4 0 0 0 0 0 0 12 0 1247.563 Q4G0J3;H0YA82 Q4G0J3 298 309 LARP7 La-related protein 7 yes no 2 0.00034434 68.121 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2588 832 2825 4226;4227 6807;6808 6808 1375;1376;1377 0 SSSHDSGTDITSVTLGDTTAVK VATSSSAKKATGRKKSSSHDSGTDITSVTL TDITSVTLGDTTAVKTKILIKKGRGNLEKT K S S V K T 1 0 0 3 0 0 0 2 1 1 1 1 0 0 0 5 5 0 0 2 0 0 22 0 2178.0288 Q03164;E9PR05;Q9HB80 Q03164 936 957 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes no 3 0.0050496 20.847 1 1.0106 1.2487 NaN 1 Median 1.0106 1.2487 NaN 1 0 Median NaN NaN NaN 0 0 Median 12776000 7228000 5547500 12776000 7228000 5547500 0 0 0 2589 798 2826 4228 6809;6810 6810 2 SSSHLSPSEEVR PSDKTMVMEALSLAKSSSHLSPSEEVRCTQ LAKSSSHLSPSEEVRCTQDFLSQTQSLLGL K S S V R C 0 1 0 0 0 0 2 0 1 0 1 0 0 0 1 5 0 0 0 1 0 0 12 0 1313.6212 Q5VWN6 Q5VWN6 1167 1178 FAM208B Protein FAM208B yes yes 2 0.0018251 61.212 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2590 852 2827 4229;4230 6811;6812 6812 1407 0 SSSPAGETEGDREPQARPGEGTAPLPPPGQK SAQYEDPRNLHSAGRSSSPAGETEGDREPQ RPGEGTAPLPPPGQKVGGSQPPFQGQREPG R S S Q K V 3 2 0 1 0 2 4 5 0 0 1 1 0 0 7 3 2 0 0 0 0 0 31 2 3099.4857 Q9BTC0 Q9BTC0 1712 1742 DIDO1 Death-inducer obliterator 1 yes yes 4 1.8119E-15 50.645 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2591 916 2828 4231 6813 6813 1586 0 SSSPAPADIAQTVQEDLR PEPVLEETAPEDAQKSSSPAPADIAQTVQE PAPADIAQTVQEDLRTFSWASVTSKNLPPS K S S L R T 3 1 0 2 0 2 1 0 0 1 1 0 0 0 2 3 1 0 0 1 0 0 18 0 1883.9225 B7Z8K4;Q6FI03;Q5U0Q1;Q53HH4;Q32P45;Q13283 B7Z8K4 48 65 G3BP;DKFZp686L1159;G3BP1 Ras GTPase-activating protein-binding protein 1 yes no 2 3.9511E-52 129.05 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2592 546 2829 4232;4233 6814;6815;6816 6815 800;801;802 0 SSSPSASLTENEVK NRASTAASSALGFSKSSSPSASLTENEVK_ KSSSPSASLTENEVK_______________ K S S V K - 1 0 1 0 0 0 2 0 0 0 1 1 0 0 1 5 1 0 0 1 0 0 14 0 1434.6838 Q05CW4 Q05CW4 555 568 WHSC1 yes yes 2 7.5469E-05 77.527 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2593 800 2830 4234 6817;6818 6817 1312 0 SSSPTAGPSTEGAEGPEEK LPEAPPKTRESDHSRSSSPTAGPSTEGAEG TAGPSTEGAEGPEEKKKVKMRRKRRLPNKE R S S E K K 2 0 0 0 0 0 4 3 0 0 0 1 0 0 3 4 2 0 0 0 0 0 19 0 1816.7963 A0A0C4DGG3;B7ZB05;B4DSN4;Q8NHM5 A0A0C4DGG3 280 298 KDM2B Lysine-specific demethylase 2B yes no 2 1.4893E-05 44.587 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2594 243 2831 4235;4236 6819;6820 6820 335 0 SSSPVTELASR LQSKSQTSPKGGRSRSSSPVTELASRSPIR GRSRSSSPVTELASRSPIRQDRGEFSASPM R S S S R S 1 1 0 0 0 0 1 0 0 0 1 0 0 0 1 4 1 0 0 1 0 0 11 0 1132.5724 A0A140VK53;Q9UQ35;O60382 A0A140VK53 1101 1111 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 yes no 2 0.0032613 53.252 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2595 284 2832 4237 6821 6821 418 0 SSSTALTTNVTEQTEK PEDLEETVFTASKPKSSSTALTTNVTEQTE SSTALTTNVTEQTEKDGDKDVFASEVTPSD K S S E K D 1 0 1 0 0 1 2 0 0 0 1 1 0 0 0 3 5 0 0 1 0 0 16 0 1695.8163 Q8WYP5;B3KTD2;B3KVE5 Q8WYP5 1342 1357 AHCTF1 Protein ELYS yes no 2 0.0015196 43.382 1 0.88163 1.09 NaN 1 Median 0.88163 1.09 NaN 1 0 Median NaN NaN NaN 0 0 Median 12895000 6591200 6303800 12895000 6591200 6303800 0 0 0 2596 897 2833 4238 6822;6823;6824 6823 3 SSSVGSSSSYPISPAVSR FADMLSGNAGGFRSRSSSVGSSSSYPISPA VGSSSSYPISPAVSRTQLASWSDPTEETGP R S S S R T 1 1 0 0 0 0 0 1 0 1 0 0 0 0 2 9 0 0 1 2 0 0 18 0 1753.8483 Q15149;D3DWL0;Q96IE3 Q15149 4384 4401 PLEC;PLEC1 Plectin yes no 2 1.1111E-32 121.19 3 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2597 822 2834;2835 4239;4240;4241;4242;4243 6825;6826;6827;6828;6829;6830;6831;6832;6833 6829 1358;1359;1360;1361 0 SSTDFSELEQPR GKNVESTNSNAYTQRSSTDFSELEQPRSCL TQRSSTDFSELEQPRSCLFEQGTRRVGPSS R S S P R S 0 1 0 1 0 1 2 0 0 0 1 0 0 1 1 3 1 0 0 0 0 0 12 0 1394.6314 A0A024RAC0;Q86V48 A0A024RAC0 956 967 LUZP1 Leucine zipper protein 1 yes no 2 0.0077093 58.223 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2598 127 2836 4244 6834 6834 186;187;1800 0 SSTFSDVEAHFR KPGEMPYVCQVCQFRSSTFSDVEAHFRAAH QFRSSTFSDVEAHFRAAHENTKNLLCPFCL R S S F R A 1 1 0 1 0 0 1 0 1 0 0 0 0 2 0 3 1 0 0 1 0 0 12 0 1381.6262 Q8ND82 Q8ND82 422 433 ZNF280C Zinc finger protein 280C yes yes 3 0.0067726 33.968 1 0.62037 0.81279 NaN 1 Median NaN NaN NaN 0 0 Median 0.62037 0.81279 NaN 1 0 Median 12328000 7087200 5240600 0 0 0 12328000 7087200 5240600 2599 887 2837 4245 6835 6835 1 SSTPLPTISSSAENTR EKKLLKLREQGTESRSSTPLPTISSSAENT STPLPTISSSAENTRQNGSNDSDRYSDNEE R S S T R Q 1 1 1 0 0 0 1 0 0 1 1 0 0 0 2 5 3 0 0 0 0 0 16 0 1646.8111 P42166;A0A024RBH7;Q59G12;G5E972;H0YJH7;A0A024RBE7;P42167 P42166 158 173 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 2 7.5344E-07 75.376 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2600 757;141 2838 4246;4247;4248;4249 6836;6837;6838;6839;6840 6838 203;204;1804 0 SSTPPGESYFGVSSLQLK VQSCPGSLSLCAGVKSSTPPGESYFGVSSL PPGESYFGVSSLQLKGQSQTSPDHRSDTSS K S S L K G 0 0 0 0 0 1 1 2 0 0 2 1 0 1 2 5 1 0 1 1 0 0 18 0 1882.9313 A0A140VK53;Q9UQ35;O60382 A0A140VK53 1041 1058 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 yes no 2 7.611E-05 40.066 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2601 284 2839 4250 6841 6841 419;420;1828 0 SSVQEECVSTISSSKDEDPLAATR PSEELELDKWKTTMKSSVQEECVSTISSSK TISSSKDEDPLAATREFIEMWRLLGREVPE K S S T R E 2 1 0 2 1 1 3 0 0 1 1 1 0 0 1 6 2 0 0 2 0 0 24 1 2595.197 C9JVB6;Q7L0Y3 C9JVB6 72 95 TRMT10C Mitochondrial ribonuclease P protein 1 yes no 3 3.0529E-27 96.903 1 0.37715 0.49041 NaN 1 Median 0.37715 0.49041 NaN 1 0 Median NaN NaN NaN 0 0 Median 15655000 12359000 3295400 15655000 12359000 3295400 0 0 0 2602 564 2840 4251 6842 6842 1 SSYLEYQK EEEITPTIQKLKEERSSYLEYQKVMREIEH QKLKEERSSYLEYQKVMREIEHLSRLYIAY R S S Q K V 0 0 0 0 0 1 1 0 0 0 1 1 0 0 0 2 0 0 2 0 0 0 8 0 1016.4815 B7ZLZ7;A0A024R158;O95347;A8K984;B3KMB1;Q2KQ72;Q05BV1;Q6IPS5;Q7Z2X1;A0JLM9;Q32Q15;Q5T821;Q05D74 B7ZLZ7 215 222 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 yes no 2 0.0067476 69.198 1 0.6171 0.78164 NaN 1 Median NaN NaN NaN 0 0 Median 0.6171 0.78164 NaN 1 0 Median 8004300 4874800 3129500 0 0 0 8004300 4874800 3129500 2603 27 2841 4252 6843;6844 6843 2 STAGDTHLGGEDFDNR DVSILTIEDGIFEVKSTAGDTHLGGEDFDN TAGDTHLGGEDFDNRMVNHFIAEFKRKHKK K S T N R M 1 1 1 3 0 0 1 3 1 0 1 0 0 1 0 1 2 0 0 0 0 0 16 0 1690.7183 E9PKE3;V9HW22;Q53GZ6;P11142;B3KTV0;Q53HF2;Q96IS6;E9PN89;A0A024R6B5;P54652 E9PKE3 202 217 HSPA8;HEL-S-72p;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 2;3 0.00026047 45.891 2 1.4413 1.9095 7.8056 2 Median NaN NaN NaN 0 0 Median 1.4413 1.9095 7.8056 2 0 Median 53707000 22935000 30772000 0 0 0 53707000 22935000 30772000 2604 623 2842 4253;4254 6845;6846;6847;6848;6849 6847 5 STAPETAIECTQAPAPASEDEK SLKEEESIEGEKEVKSTAPETAIECTQAPA IECTQAPAPASEDEKVVVEPPEGEEKVEKA K S T E K V 5 0 0 1 1 1 4 0 0 1 0 1 0 0 3 2 3 0 0 0 0 0 22 0 2302.0271 B3KY63;F5GWX5;A0A0C4DGG9;Q14839 B3KY63 1559 1580 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 2 1.3598E-19 91.889 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2605 244 2843 4255 6850 6850 338 0 STAYEDYYYHPPPR DKKRKERQAARQASRSTAYEDYYYHPPPRM RSTAYEDYYYHPPPRMPPPIRGRGRGGGRG R S T P R M 1 1 0 1 0 0 1 0 1 0 0 0 0 0 3 1 1 0 4 0 0 0 14 0 1757.7686 Q7Z334;B4DMD1;B4DT28;B4DMB1;Q0VGD6;Q6MZS5;B2R7W4;O43390 Q7Z334 38 51 DKFZp686O0665;HNRNPR;HNRPR;DKFZp686A13234 Heterogeneous nuclear ribonucleoprotein R yes no 3 0.0074352 31.526 1 1.4962 1.9985 NaN 1 Median NaN NaN NaN 0 0 Median 1.4962 1.9985 NaN 1 0 Median 7276300 3653300 3623000 0 0 0 7276300 3653300 3623000 2606 406 2844 4256 6851 6851 1 STEFPRK RSFRYENESLQNGRKSTEFPRKIREQEPAR ESLQNGRKSTEFPRKIREQEPARRVSRSSF K S T R K I 0 1 0 0 0 0 1 0 0 0 0 1 0 1 1 1 1 0 0 0 0 0 7 1 863.45012 P46013;Q70L73 P46013 108 114 MKI67 Antigen KI-67 no no 2 0.026954 73.039 1 1.0946 1.7272 NaN 1 Median NaN NaN NaN 0 0 Median 1.0946 1.7272 NaN 1 0 Median 110760000 50846000 59910000 0 0 0 110760000 50846000 59910000 2607 762;865 2845 4257 6852 6852 1 STELLIR RPGTVALREIRRYQKSTELLIRKLPFQRLV REIRRYQKSTELLIRKLPFQRLVREIAQDF K S T I R K 0 1 0 0 0 0 1 0 0 1 2 0 0 0 0 1 1 0 0 0 0 0 7 0 830.48617 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;Q6NXT2;K7EMV3;B4DEB1;B2R6Y1;K7ES00;K7EP01;Q5TEC6 B4E380 58 64 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C no no 2 7.5633E-11 108.98 1 1 0.65255 0.87138 3.0986 2 Median 0.73731 0.89068 NaN 1 0 Median 0.57754 0.85249 NaN 1 0 Median 640680000 390990000 249700000 234490000 134080000 100410000 406200000 256910000 149290000 2608 399;849 2846 4258;4259 6853;6854;6855;6856;6857;6858;6859;6860 6856 8 STELLIRK RPGTVALREIRRYQKSTELLIRKLPFQRLV EIRRYQKSTELLIRKLPFQRLVREIAQDFK K S T R K L 0 1 0 0 0 0 1 0 0 1 2 1 0 0 0 1 1 0 0 0 0 0 8 1 958.58113 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;Q6NXT2;K7EMV3;B4DEB1;B2R6Y1;K7ES00;K7EP01;Q5TEC6 B4E380 58 65 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C no no 2 0.0020178 89.752 3 0.55769 0.73665 NaN 1 Median NaN NaN NaN 0 0 Median 0.55769 0.73665 NaN 1 0 Median 10085000 7082600 3002400 0 0 0 10085000 7082600 3002400 2609 399;849 2847 4260;4261;4262 6861;6862;6863;6864 6861 4 STEPSVTPDLLNFK SPLSPHRRAKSLDRRSTEPSVTPDLLNFKK RSTEPSVTPDLLNFKKGWLTKQYEDGQWKK R S T F K K 0 0 1 1 0 0 1 0 0 0 2 1 0 1 2 2 2 0 0 1 0 0 14 0 1546.7879 B9EGI2;Q6WCQ1;U6FSN9;Q8N236 B9EGI2 376 389 MPRIP;Mprip-Ntrk1 fusion gene Myosin phosphatase Rho-interacting protein;Tyrosine-protein kinase receptor yes no 2 0.00074356 58.676 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2610 553 2848 4263 6865 6865 816;1902 0 STESLQANVQR ARTIGISVDPRRRNKSTESLQANVQRLKEY RRNKSTESLQANVQRLKEYRSKLIL_____ K S T Q R L 1 1 1 0 0 2 1 0 0 0 1 0 0 0 0 2 1 0 0 1 0 0 11 0 1231.6157 J3QSB4;Q6NZ55;A8K4C8;P26373 J3QSB4 106 116 RPL13 60S ribosomal protein L13 yes no 2 0.00050057 69.423 1 1 0.54627 0.6905 9.3419 2 Median 0.59117 0.73765 NaN 1 0 Median 0.50478 0.64636 NaN 1 0 Median 20195000 13083000 7112900 2466100 1389500 1076600 17729000 11693000 6036200 2611 353 2849 4264;4265 6866;6867;6868 6866 3 STFREESPLR DYSPPLHKNLDAREKSTFREESPLRIKMIA DAREKSTFREESPLRIKMIASDSHRPEVKL K S T L R I 0 2 0 0 0 0 2 0 0 0 1 0 0 1 1 2 1 0 0 0 0 0 10 1 1220.6149 Q6DCA8;E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09;E9PJA7 Q6DCA8 525 534 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2;3 0.00011271 73.927 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2612 622 2850 4266;4267;4268 6869;6870;6871 6870 951 0 STFSTNYR ______________________________ ______________________________ R S T Y R S 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 2 2 0 1 0 0 0 8 0 974.44576 F8VZY9;B2RA03;A0A024RAY2;P05783 F8VZY9 7 14 KRT18 Keratin, type I cytoskeletal 18 yes no 2 0.011695 60.972 1 1.3555 1.7819 NaN 1 Median NaN NaN NaN 0 0 Median 1.3555 1.7819 NaN 1 0 Median 11938000 6513600 5424800 0 0 0 11938000 6513600 5424800 2613 134 2851 4269 6872;6873 6872 2 STITSREIQTAVR RIAGEASRLAHYNKRSTITSREIQTAVRLL KRSTITSREIQTAVRLLLPGELAKHAVSEG R S T V R L 1 2 0 0 0 1 1 0 0 2 0 0 0 0 0 2 3 0 0 1 0 0 13 1 1460.7947 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;P57053;A0A024RCJ2;Q16778;P33778;P23527;P06899 A0A024RCJ2 88 100 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J no no 3 0.006262 38.3 1 1.1386 1.6167 NaN 1 Median NaN NaN NaN 0 0 Median 1.1386 1.6167 NaN 1 0 Median 7693600 3426900 4266700 0 0 0 7693600 3426900 4266700 2614 10;158 2852 4270 6874 6874 1 STLRSTPLASPSPSPGRSPQR TTSGFSEFTPQSILRSTLRSTPLASPSPSP PLASPSPSPGRSPQRLKETRISFVEEDVHP R S T Q R L 1 3 0 0 0 1 0 1 0 0 2 0 0 0 5 6 2 0 0 0 0 0 21 2 2178.1505 Q8WYP5;B3KTD2;B3KVE5 Q8WYP5 1205 1225 AHCTF1 Protein ELYS yes no 3 2.2036E-07 42.973 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2615 897 2853 4271 6875 6875 1530;1531;1532;1533;2028 0 STPFIVPSSPTEQEGR TNSSDLVAPSPDAFRSTPFIVPSSPTEQEG TPFIVPSSPTEQEGRQDKPMDTSVLSEEGG R S T G R Q 0 1 0 0 0 1 2 1 0 1 0 0 0 1 3 3 2 0 0 1 0 0 16 0 1730.8475 B7Z3E7;A6NNK5;Q12888;C9JXV0;A8KA50 B7Z3E7 377 392 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 1.0263E-05 66.436 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2616 329 2854 4272 6876 6876 501 0 STPKEETVNDPEEAGHR LEETAGSTSIPKRKKSTPKEETVNDPEEAG PKEETVNDPEEAGHRSGSKKKRKFSKGEPV K S T H R S 1 1 1 1 0 0 4 1 1 0 0 1 0 0 2 1 2 0 0 1 0 0 17 1 1894.8657 A8K9K6;O00567;Q9BSN3 A8K9K6 537 553 NOP56 Nucleolar protein 56 yes no 3 1.1655E-08 82.406 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2617 379 2855 4273;4274 6877;6878;6879 6879 578;1861 0 STPLASPSPSPGR FSEFTPQSILRSTLRSTPLASPSPSPGRSP LRSTPLASPSPSPGRSPQRLKETRISFVEE R S T G R S 1 1 0 0 0 0 0 1 0 0 1 0 0 0 4 4 1 0 0 0 0 0 13 0 1252.6412 Q8WYP5;B3KTD2;B3KVE5 Q8WYP5 1209 1221 AHCTF1 Protein ELYS yes no 2 0.001273 59.607 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2618 897 2856 4275 6880 6880 1530;1531;1532;2028 0 STPLASPSPSPGRSPQR FSEFTPQSILRSTLRSTPLASPSPSPGRSP PLASPSPSPGRSPQRLKETRISFVEEDVHP R S T Q R L 1 2 0 0 0 1 0 1 0 0 1 0 0 0 5 5 1 0 0 0 0 0 17 1 1720.8856 Q8WYP5;B3KTD2;B3KVE5 Q8WYP5 1209 1225 AHCTF1 Protein ELYS yes no 2;3 1.6211E-16 106.31 2 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2619 897 2857;2858;2859 4276;4277;4278;4279;4280 6881;6882;6883;6884;6885 6882 1530;1531;1532;1533;2028 0 STTPTSSPFR SGIDIKPGTPPIAGRSTTPTSSPFRATSTS PIAGRSTTPTSSPFRATSTSPNSQSSKMNS R S T F R A 0 1 0 0 0 0 0 0 0 0 0 0 0 1 2 3 3 0 0 0 0 0 10 0 1079.5247 H7C5N8;E7EPN9;Q9Y520 H7C5N8 1163 1172 PRRC2C Protein PRRC2C yes no 2 0.0080897 47.844 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2620 606 2860 4281 6886 6886 904;905;1918 0 STTTGHLIYK THINIVVIGHVDSGKSTTTGHLIYKCGGID VDSGKSTTTGHLIYKCGGIDKRTIEKFEKE K S T Y K C 0 0 0 0 0 0 0 1 1 1 1 1 0 0 0 1 3 0 1 0 0 0 10 0 1119.5924 A0A087WV01;Q9H2I7;Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q53GE9;Q53GA1;Q53G85;Q5VTE0;P68104;A6PW80;Q5JR01;B4DNE0;A0A087WVQ9;Q05639;Q6NS35;Q6NSH7 A0A087WV01 21 30 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 yes no 2 1.3957E-19 116.05 1 1 1.2908 1.6138 165.49 2 Median 0.40346 0.50078 NaN 1 0 Median 4.1299 5.2005 NaN 1 0 Median 264010000 60191000 203820000 20680000 15335000 5344900 243330000 44856000 198480000 2621 186 2861 4282;4283 6887;6888;6889 6889 3 STVLTPMFVETQASQGTLQTR CEFQEYTIDSDWRFRSTVLTPMFVETQASQ MFVETQASQGTLQTRTQEGSLSARWPVAGQ R S T T R T 1 1 0 0 0 3 1 1 0 0 2 0 1 1 1 2 5 0 0 2 0 0 21 0 2294.1576 P78527 P78527 2599 2619 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 4.5527E-09 58.479 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2622 795 2862 4284 6890 6890 189 1268 0 SVAVSDEEEVEEEAER ESPIKLSPATPSRKRSVAVSDEEEVEEEAE VAVSDEEEVEEEAERRKERCKRGRFVVKEE R S V E R R 2 1 0 1 0 0 7 0 0 0 0 0 0 0 0 2 0 0 0 3 0 0 16 0 1805.7803 Q9Y6X9 Q9Y6X9 739 754 MORC2 MORC family CW-type zinc finger protein 2 yes yes 2 4.9703E-07 83.418 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2623 969 2863 4285;4286 6891;6892;6893 6893 1760 0 SVDFHFR GIGQPVKKSVSQVTKSVDFHFRTDERIKQH KSVSQVTKSVDFHFRTDERIKQHPKNQEEY K S V F R T 0 1 0 1 0 0 0 0 1 0 0 0 0 2 0 1 0 0 0 1 0 0 7 0 906.4348 B3KM90;Q643R0;Q9ULW0 B3KM90 118 124 HCTP4;TPX2 Targeting protein for Xklp2 yes no 2;3 0.00052764 90.986 2 0.51622 0.70744 22.231 2 Median NaN NaN NaN 0 0 Median 0.51622 0.70744 22.231 2 0 Median 119530000 74409000 45117000 0 0 0 119530000 74409000 45117000 2624 427 2864 4287;4288 6894;6895;6896 6896 3 SVEDRFDQQK TRLTYEIEDEKRRRKSVEDRFDQQKNDYDQ KRRRKSVEDRFDQQKNDYDQLQKARQCEKE K S V Q K N 0 1 0 2 0 2 1 0 0 0 0 1 0 1 0 1 0 0 0 1 0 0 10 1 1250.5891 Q4LE79;P15924;B4DKX6;B4E2A0 Q4LE79 1174 1183 DSP variant protein;DSP Desmoplakin yes no 2 2.9679E-08 84.954 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2625 737 2865 4289;4290 6897;6898;6899;6900 6898 1148 0 SVELEEALPVTTAEGMAK ______________________________ LEEALPVTTAEGMAKKVTKAGGSAALSPSK M S V A K K 3 0 0 0 0 0 4 1 0 0 2 1 1 0 1 1 2 0 0 2 0 0 18 0 1873.9343 Q92522 Q92522 2 19 H1FX Histone H1x yes yes 2 8.1807E-11 77.324 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2626 898 2866 4291 6901 6901 207 1535 0 SVENQESVEIINDLK KVSSVTKRTPRRIKRSVENQESVEIINDLK SVENQESVEIINDLKVSTVTSPSRMIRKLR R S V L K V 0 0 2 1 0 1 3 0 0 2 1 1 0 0 0 2 0 0 0 2 0 0 15 0 1715.8578 Q8WYP5;B3KTD2;B3KVE5;B3KRD0 Q8WYP5 1878 1892 AHCTF1 Protein ELYS yes no 2 2.1253E-90 156.57 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2627 897 2867 4292;4293 6902;6903;6904 6904 1534 0 SVFDEELTNTSKK EPVRGPAKKQKQGKKSVFDEELTNTSKKAL KKSVFDEELTNTSKKALKQYRAGPSFEERK K S V K K A 0 0 1 1 0 0 2 0 0 0 1 2 0 1 0 2 2 0 0 1 0 0 13 1 1496.7359 B7Z6D5;B3GQE6;Q96GQ7;Q53G15 B7Z6D5 715 727 DDX27 Probable ATP-dependent RNA helicase DDX27 yes no 2;3 0.021623 35.677 2 0.6745 0.82035 NaN 1 Median NaN NaN NaN 0 0 Median 0.6745 0.82035 NaN 1 0 Median 7526200 5325600 2200600 0 0 0 7526200 5325600 2200600 2628 423 2868 4294;4295 6905;6906 6906 2 SVGDESWEQTQEGDVGALYHEQLALK THAEKELQNDMTDEKSVGDESWEQTQEGDV EGDVGALYHEQLALKTDCQERLDHTNFRFL K S V L K T 2 0 0 2 0 3 4 3 1 0 3 1 0 0 0 2 1 1 1 2 0 0 26 0 2888.3464 O75691 O75691 783 808 UTP20 Small subunit processome component 20 homolog yes yes 3 1.1764E-13 52.359 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2629 711 2869 4296 6907 6907 1062 0 SVGDGETVEFDVVEGEK HQTAIKKNNPRKYLRSVGDGETVEFDVVEG GDGETVEFDVVEGEKGAEAANVTGPDGVPV R S V E K G 0 0 0 2 0 0 4 3 0 0 0 1 0 1 0 1 1 0 0 4 0 0 17 0 1794.816 A0A0D9SEI8;Q59EB5;Q6PKI6;Q59HE1;A0A024RAV4;Q7KZ24;B2RCC2;A0A024RAQ1;H0Y449;P67809;Q9Y2T7;P16989 A0A0D9SEI8 26 42 YBX3;YBX1;CSDA;YBX2 Nuclease-sensitive element-binding protein 1;Y-box-binding protein 2;Y-box-binding protein 3 yes no 2 3.079E-06 64.65 1 1 0.74609 0.9355 15.933 2 Median 0.85133 1.0471 NaN 1 0 Median 0.65387 0.83583 NaN 1 0 Median 16453000 9513900 6939500 5447900 3354700 2093300 11005000 6159200 4846200 2630 131 2870 4297;4298 6908;6909 6908 2 SVGGSGGGSFGDNLVTR SGSSASSVTVTRSYRSVGGSGGGSFGDNLV GGSGGGSFGDNLVTRSYLLGNSSPRTQSPQ R S V T R S 0 1 1 1 0 0 0 6 0 0 1 0 0 1 0 3 1 0 0 2 0 0 17 0 1565.7434 P02545;A0A0C4DGC5 P02545 628 644 LMNA Prelamin-A/C;Lamin-A/C yes no 2 2.7515E-20 110.12 3 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2631 725 2871;2872 4299;4300;4301;4302;4303 6910;6911;6912;6913;6914;6915;6916;6917;6918;6919;6920;6921 6913 1115;1116 0 SVICDISPLR QSSAHEPGGSLSERRSVICDISPLRQIVRD LSERRSVICDISPLRQIVRDPGAHSLGHMS R S V L R Q 0 1 0 1 1 0 0 0 0 2 1 0 0 0 1 2 0 0 0 1 0 0 10 0 1158.6067 W5ZR30;Q9UGU0 W5ZR30 865 874 TCF20 Transcription factor 20 yes no 2 2.7907E-05 93.345 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2632 949 2873 4304;4305 6922;6923;6924;6925;6926 6924 1695 0 SVNEILGLAESSPNEPK SEAGQIDDLEKDIEKSVNEILGLAESSPNE NEILGLAESSPNEPKAATLAVPPPEDVQPS K S V P K A 1 0 2 0 0 0 3 1 0 1 2 1 0 0 2 3 0 0 0 1 0 0 17 0 1782.9 B4DUP7;Q9H8G2 B4DUP7 156 172 CAAP1 Caspase activity and apoptosis inhibitor 1 yes no 2 8.1072E-06 58.98 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2633 501 2874 4306;4307 6927;6928 6928 740;741 0 SVNELIYKR RIVEPYIAWGYPNLKSVNELIYKRGYGKIN GYPNLKSVNELIYKRGYGKINKKRIALTDN K S V K R G 0 1 1 0 0 0 1 0 0 1 1 1 0 0 0 1 0 0 1 1 0 0 9 1 1120.6241 A8MUD9;A0A024R814;P18124 A8MUD9 109 117 RPL7 60S ribosomal protein L7 yes no 2 0.012187 51.066 1 0.69433 0.92064 NaN 1 Median NaN NaN NaN 0 0 Median 0.69433 0.92064 NaN 1 0 Median 8965400 5230500 3735000 0 0 0 8965400 5230500 3735000 2634 99 2875 4308 6929;6930 6929 2 SVPGTTSSPLVGDISPK NPMYIHTSVSQDFSRSVPGTTSSPLVGDIS PGTTSSPLVGDISPKSSPHEVKFQMQRKSE R S V P K S 0 0 0 1 0 0 0 2 0 1 1 1 0 0 3 4 2 0 0 2 0 0 17 0 1640.8621 H0Y6S1;B4DRC2;B4DZR9;Q9UQR0 H0Y6S1 92 108 SCML2 Sex comb on midleg-like protein 2 yes no 2 1.4519E-26 98.062 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2635 492 2876;2877 4309;4310;4311;4312 6931;6932;6933;6934;6935;6936 6935 723;724;725 0 SVPGTTSSPLVGDISPKSSPHEVK NPMYIHTSVSQDFSRSVPGTTSSPLVGDIS LVGDISPKSSPHEVKFQMQRKSEGN_____ R S V V K F 0 0 0 1 0 0 1 2 1 1 1 2 0 0 4 6 2 0 0 3 0 0 24 1 2405.2438 H0Y6S1;B4DRC2;B4DZR9;Q9UQR0 H0Y6S1 92 115 SCML2 Sex comb on midleg-like protein 2 yes no 3 4.1344E-16 59.536 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2636 492 2878;2879 4313;4314 6937;6938 6937 723;724;725;726 0 SVQEGENPDDGVRGSPPEDYR ______________________________ NPDDGVRGSPPEDYRLGQVASSLFRGEHHS R S V Y R L 0 2 1 3 0 1 3 3 0 0 0 0 0 0 3 2 0 0 1 2 0 0 21 1 2302.0098 Q5TCT4;A2A2V2;P42696;H7C5M1 Q5TCT4 14 34 RBM34 RNA-binding protein 34 yes no 3 2.4624E-17 87.659 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2637 302 2880 4315;4316 6939;6940;6941;6942 6940 449 0 SVQIAYHR DKEKMLEGRKSNIRKSVQIAYHRALQHRSK RKSNIRKSVQIAYHRALQHRSKVQGEQSSE K S V H R A 1 1 0 0 0 1 0 0 1 1 0 0 0 0 0 1 0 0 1 1 0 0 8 0 972.51411 P55201 P55201 1187 1194 BRPF1 Peregrin yes yes 2 1.0991E-08 105.4 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2792700 2792700 0 0 0 0 2792700 2792700 0 2638 779 2881;2882 4317;4318 6943;6944;6945 6944 1261 1 SVSLVGEDERK VHRVGRTARAGRAGRSVSLVGEDERKMLKE RAGRSVSLVGEDERKMLKEIVKAAKAPVKA R S V R K M 0 1 0 1 0 0 2 1 0 0 1 1 0 0 0 2 0 0 0 2 0 0 11 1 1217.6252 B7Z6D5;B3GQE6;Q96GQ7;Q53G15 B7Z6D5 532 542 DDX27 Probable ATP-dependent RNA helicase DDX27 yes no 3 0.0079998 30.182 1 0.56592 0.76497 NaN 1 Median NaN NaN NaN 0 0 Median 0.56592 0.76497 NaN 1 0 Median 11103000 6690300 4412800 0 0 0 11103000 6690300 4412800 2639 423 2883 4319 6946;6947 6946 2 SVVCSDVEQQVIVIEEEK RRILSKPIEVQVGGRSVVCSDVEQQVIVIE CSDVEQQVIVIEEEKKFLKLLELLGHYQES R S V E K K 0 0 0 1 1 2 4 0 0 2 0 1 0 0 0 2 0 0 0 5 0 0 18 0 2089.0249 D3DQA6;A8K6X3;A0A0C4DG89;Q7L014 D3DQA6 587 604 DDX46 Probable ATP-dependent RNA helicase DDX46 yes no 2 0.0029496 33.195 1 0.39973 0.49463 NaN 1 Median 0.39973 0.49463 NaN 1 0 Median NaN NaN NaN 0 0 Median 5242700 3038200 2204600 5242700 3038200 2204600 0 0 0 2640 242 2884 4320 6948 6948 1 SVVCSDVEQQVIVIEEEKK RRILSKPIEVQVGGRSVVCSDVEQQVIVIE SDVEQQVIVIEEEKKFLKLLELLGHYQESG R S V K K F 0 0 0 1 1 2 4 0 0 2 0 2 0 0 0 2 0 0 0 5 0 0 19 1 2217.1199 D3DQA6;A8K6X3;A0A0C4DG89;Q7L014 D3DQA6 587 605 DDX46 Probable ATP-dependent RNA helicase DDX46 yes no 3 0.0013987 24.793 1 0.57932 0.70333 NaN 1 Median 0.57932 0.70333 NaN 1 0 Median NaN NaN NaN 0 0 Median 6228300 3704200 2524100 6228300 3704200 2524100 0 0 0 2641 242 2885 4321 6949 6949 1 SVVGNLHR TGVILANDANAERLKSVVGNLHRLGVTNTI ANAERLKSVVGNLHRLGVTNTIISHYDGRQ K S V H R L 0 1 1 0 0 0 0 1 1 0 1 0 0 0 0 1 0 0 0 2 0 0 8 0 880.4879 P46087 P46087 424 431 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 2 0.0065394 71.141 1 0.53536 0.73041 NaN 1 Median NaN NaN NaN 0 0 Median 0.53536 0.73041 NaN 1 0 Median 38759000 23869000 14891000 0 0 0 38759000 23869000 14891000 2642 763 2886 4322 6950;6951 6951 2 SVVSDLEADDVK KTSPKLSNKELKPQKSVVSDLEADDVKGSV PQKSVVSDLEADDVKGSVPLSSSPPATHFP K S V V K G 1 0 0 3 0 0 1 0 0 0 1 1 0 0 0 2 0 0 0 3 0 0 12 0 1275.6194 P11388 P11388 1374 1385 TOP2A DNA topoisomerase 2-alpha yes yes 2 7.8449E-119 170.22 5 6 0.87441 1.098 NaN 1 Median NaN NaN NaN 0 0 Median 0.87441 1.098 NaN 1 0 Median 46141000 25011000 21130000 0 0 0 46141000 25011000 21130000 2643 734 2887;2888;2889 4323;4324;4325;4326;4327;4328;4329;4330;4331;4332;4333 6952;6953;6954;6955;6956;6957;6958;6959;6960;6961;6962;6963;6964;6965;6966;6967;6968;6969;6970;6971;6972 6965 1136;1137 1 SYCAEIAHNVSSK VHNVKELEVLLMCNKSYCAEIAHNVSSKNR NKSYCAEIAHNVSSKNRKAIVERAAQLAIR K S Y S K N 2 0 1 0 1 0 1 0 1 1 0 1 0 0 0 3 0 0 1 1 0 0 13 0 1464.6667 D3YTB1;A0A024R2G7;F8W727;P62910 D3YTB1 94 106 RPL32 60S ribosomal protein L32 yes no 2;3 6.7323E-22 116.55 2 2 0.55224 0.69256 12.271 4 Median 0.64494 0.78173 11.879 2 0 Median 0.51871 0.65643 2.3287 2 0 Median 127720000 83034000 44686000 21183000 12761000 8421900 106540000 70273000 36265000 2644 46 2890 4334;4335;4336;4337 6973;6974;6975;6976;6977;6978;6979 6974 6 SYDANTVASFYTTK ICQTVLKGKWPSARRSYDANTVASFYTTKL RSYDANTVASFYTTKLLDSPGAATEYSEPS R S Y T K L 2 0 1 1 0 0 0 0 0 0 0 1 0 1 0 2 3 0 2 1 0 0 14 0 1566.7202 Q461N2;B7ZML1;Q3L8U1;Q5JB41;A0A087WU44 Q461N2 1400 1413 CHD9 Chromodomain-helicase-DNA-binding protein 9 yes no 2 1.3786E-31 122.33 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2645 548 2891 4338 6980;6981 6981 805 0 SYELPDGQVITIGNER EQEMATAASSSSLEKSYELPDGQVITIGNE YELPDGQVITIGNERFRCPEALFQPSFLGM K S Y E R F 0 1 1 1 0 1 2 2 0 2 1 0 0 0 1 1 1 0 1 1 0 0 16 0 1789.8846 P63261;B4E3A4;Q8WVW5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4DVQ0;B4E335;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;B3KUD3;B7Z6P1;D2JYH4;P63267;P68133;P68032;P62736;V9HVZ7;B4DUI8;B3KW67;A8K3K1;Q96DE1;Q96FU6;Q13707;Q6S8J3;A5A3E0;Q562R1;F1BXA6;A4UCT3;A5GZ75;B3KPP5;Q9BYX7;K4EQ44;K4EP00;K4ENJ5;G8FSY7;A0A173GMX0 P63261 239 254 ACTG1;PS1TP5BP1;ACTB;ACTA2;ACTG2;ACTA1;ACTC1;HEL-176;POTEE;POTEF;ACTBL2;POTEKP Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Beta-actin-like protein 2;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed yes no 2 5.8854E-09 95.401 2 1 1.3434 1.7083 104.64 2 Median 0.65224 0.8151 NaN 1 0 Median 2.7669 3.5802 NaN 1 0 Median 48690000 21763000 26927000 27582000 15371000 12212000 21107000 6391800 14716000 2646 794 2892;2893 4339;4340;4341 6982;6983;6984;6985;6986;6987 6984 1266 4 SYLEGSSDNQLK DSYSSRTSSQSKGNKSYLEGSSDNQLKDSE GNKSYLEGSSDNQLKDSESTPVDDRISLEQ K S Y L K D 0 0 1 1 0 1 1 1 0 0 2 1 0 0 0 3 0 0 1 0 0 0 12 0 1339.6256 Q8TDR3;Q8NEH0;Q8IYV2;Q9UHI6;E9PJ60 Q8TDR3 672 683 DDX20 Probable ATP-dependent RNA helicase DDX20 yes no 2 8.0658E-08 78.529 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2647 877 2894 4342 6988 6988 1472 0 SYLLGNSSPR GGSGGGSFGDNLVTRSYLLGNSSPRTQSPQ NLVTRSYLLGNSSPRTQSPQNCSIM_____ R S Y P R T 0 1 1 0 0 0 0 1 0 0 2 0 0 0 1 3 0 0 1 0 0 0 10 0 1092.5564 P02545;A0A0C4DGC5 P02545 645 654 LMNA Prelamin-A/C;Lamin-A/C yes no 2 0.0030079 60.255 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2648 725 2895 4343;4344 6989;6990;6991;6992 6990 1117;1118 0 SYSVEKSPQDEGLHLLK EPSFPTPAFRPVSLKSYSVEKSPQDEGLHL SVEKSPQDEGLHLLKPLSIPKRLGLPKPEG K S Y L K P 0 0 0 1 0 1 2 1 1 0 3 2 0 0 1 3 0 0 1 1 0 0 17 1 1928.9844 Q7RTP6 Q7RTP6 1365 1381 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 yes yes 3 8.3131E-06 50.827 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2649 867 2896 4345 6993;6994 6994 1443 0 SYVAWDREK NKNLLTVTSSDEMMKSYVAWDREKRLSFAV SDEMMKSYVAWDREKRLSFAVPFREMKPVI K S Y E K R 1 1 0 1 0 0 1 0 0 0 0 1 0 0 0 1 0 1 1 1 0 0 9 1 1152.5564 P78527;B4DL41 P78527 882 890 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 0.023954 39.022 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2650 795 2897 4346 6995 6995 1 TAANLVVETGQDGVQIR AKEFTNHWWNELFNKTAANLVVETGQDGVQ ANLVVETGQDGVQIRSLSKETTRYNHPKPN K T A I R S 2 1 1 1 0 2 1 2 0 1 1 0 0 0 0 0 2 0 0 3 0 0 17 0 1769.9272 A8KAG1;Q5T3I0;A0A0A0MRK1;E9PAV9;E9PPY4;F2Z3C6;B4DVU2 A8KAG1 72 88 GPATCH4 G patch domain-containing protein 4 yes no 2 2.3627E-05 59.248 1 0.77986 1.0264 NaN 1 Median NaN NaN NaN 0 0 Median 0.77986 1.0264 NaN 1 0 Median 11806000 6960700 4845100 0 0 0 11806000 6960700 4845100 2651 383 2898 4347 6996;6997 6997 2 TAAPSPSLLYK SWASDHNYNAVKPEKTAAPSPSLLYKSTKE KPEKTAAPSPSLLYKSTKEDRRSEEKAAAM K T A Y K S 2 0 0 0 0 0 0 0 0 0 2 1 0 0 2 2 1 0 1 0 0 0 11 0 1146.6285 Q9BTC0 Q9BTC0 519 529 DIDO1 Death-inducer obliterator 1 yes yes 2 0.00024187 87.001 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2652 916 2899 4348;4349 6998;6999;7000;7001 7000 1587 0 TAAPSVRPEK ______________________________ RGAGRTAAPSVRPEKRRSEPELEPEPEPEP R T A E K R 2 1 0 0 0 0 1 0 0 0 0 1 0 0 2 1 1 0 0 1 0 0 10 1 1054.5771 B2RDN4;A8K3R2;Q14137;A0A075B729 B2RDN4 10 19 BOP1 Ribosome biogenesis protein BOP1 yes no 3 0.00032523 73.887 1 0.69612 1.0684 NaN 1 Median NaN NaN NaN 0 0 Median 0.69612 1.0684 NaN 1 0 Median 33405000 17960000 15445000 0 0 0 33405000 17960000 15445000 2653 349 2900 4350 7002;7003 7003 2 TAASFDECSTAGVFLSTLHCQDYR SEADRKCEIDPMFQKTAASFDECSTAGVFL TAGVFLSTLHCQDYRSELLFPSDVQTLSTG K T A Y R S 3 1 0 2 2 1 1 1 1 0 2 0 0 2 0 3 3 0 1 1 0 0 24 0 2735.1956 B4DRG7;E9PHA2;A8K4T8;Q15003;C9J470;C9JZP1 B4DRG7 224 247 NCAPH Condensin complex subunit 2 yes no 3 0.0075595 30.585 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 12543000 12543000 0 0 0 0 12543000 12543000 0 2654 354 2901 4351 7004 7004 1 TADDSATSDYCPAPK RKLESRKYENKTRRRTADDSATSDYCPAPK TADDSATSDYCPAPKRLKTNCYNNGKDRGD R T A P K R 3 0 0 3 1 0 0 0 0 0 0 1 0 0 2 2 2 0 1 0 0 0 15 0 1597.6566 Q9UBC3;B3KM53;Q59H79 Q9UBC3 383 397 DNMT3B DNA (cytosine-5)-methyltransferase 3B yes no 2 0.0075969 46.706 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2655 948 2902 4352 7005 7005 2051 0 TAEEENPEHVEIQK AEIYEQEYIKLNQQKTAEEENPEHVEIQKM KTAEEENPEHVEIQKMMDSLFLKLDALSNF K T A Q K M 1 0 1 0 0 1 5 0 1 1 0 1 0 0 1 0 1 0 0 1 0 0 14 0 1651.7689 O00566;B3KPV5 O00566 485 498 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 yes no 3 0.00032322 59.709 1 0.68436 0.89844 NaN 1 Median NaN NaN NaN 0 0 Median 0.68436 0.89844 NaN 1 0 Median 12590000 8655600 3934300 0 0 0 12590000 8655600 3934300 2656 695 2903 4353 7006 7006 1 TAFYNEDDSEEEQR KGSEPHMRTRNQGRRTAFYNEDDSEEEQRQ RTAFYNEDDSEEEQRQLLFEDTSLTFGTSS R T A Q R Q 1 1 1 2 0 1 4 0 0 0 0 0 0 1 0 1 1 0 1 0 0 0 14 0 1731.686 Q8WWQ0;Q9NWP3 Q8WWQ0 1775 1788 PHIP PH-interacting protein yes no 2 0 280.87 1 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2657 894 2904 4354;4355;4356 7007;7008;7009;7010;7011;7012;7013;7014;7015;7016;7017 7010 1507 0 TAFYNEDDSEEEQRQLLFEDTSLTFGTSSR KGSEPHMRTRNQGRRTAFYNEDDSEEEQRQ LLFEDTSLTFGTSSRGRVRKLTEKAKANLI R T A S R G 1 2 1 3 0 2 5 1 0 0 3 0 0 3 0 4 4 0 1 0 0 0 30 1 3514.5648 Q8WWQ0;Q9NWP3 Q8WWQ0 1775 1804 PHIP PH-interacting protein yes no 3 7.707E-09 48.627 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2658 894 2905 4357 7018 7018 1507 0 TAGEASTSSMLIPK MCVIQSRQLVRTPQRTAGEASTSSMLIPKP RTAGEASTSSMLIPKPPPKTDILKSLDTMD R T A P K P 2 0 0 0 0 0 1 1 0 1 1 1 1 0 1 3 2 0 0 0 0 0 14 0 1391.6966 F8VNZ1;F8VUB8;F8VYK8;F8VVE3;F8VTT5 F8VNZ1 27 40 PFKM yes no 2 0.0024703 40.725 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2659 634 2906 4358 7019 7019 1932 0 TAHNSEADLEESFNEHELEPSSPK PSQGIYMVYCRKHKKTAHNSEADLEESFNE EESFNEHELEPSSPKSKKKSRKGRPRKTNF K T A P K S 2 0 2 1 0 0 6 0 2 0 2 1 0 1 2 4 1 0 0 0 0 0 24 0 2696.1838 Q8IWS0 Q8IWS0 134 157 PHF6 PHD finger protein 6 yes yes 3 5.565E-28 98.112 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2660 874 2907;2908 4359;4360;4361 7020;7021;7022;7023 7022 1464;1465;1466 0 TAITVEHLAIK STYEQVDLIGKKTQKTAITVEHLAIKCHWT KTQKTAITVEHLAIKCHWTQRAAVIGDVIR K T A I K C 2 0 0 0 0 0 1 0 1 2 1 1 0 0 0 0 2 0 0 1 0 0 11 0 1194.6972 Q9NR30 Q9NR30 407 417 DDX21 Nucleolar RNA helicase 2 yes yes 2 0.010487 55.084 1 0.26708 0.35629 NaN 1 Median NaN NaN NaN 0 0 Median 0.26708 0.35629 NaN 1 0 Median 5552000 4178200 1373800 0 0 0 5552000 4178200 1373800 2661 934 2909 4362 7024 7024 1 TALDDRPQVLQPHR CALSQKSSLKDCSEKTALDDRPQVLQPHRL KTALDDRPQVLQPHRLRSFSASQSTDREGA K T A H R L 1 2 0 2 0 2 0 0 1 0 2 0 0 0 2 0 1 0 0 1 0 0 14 1 1644.8696 Q5H9S0;B4DTN6;Q9ULJ3 Q5H9S0 393 406 DKFZp781N1974;ZBTB21 Zinc finger and BTB domain-containing protein 21 yes no 4 0.02974 11.709 1 0.65701 0.94913 NaN 1 Median NaN NaN NaN 0 0 Median 0.65701 0.94913 NaN 1 0 Median 8553700 4963200 3590500 0 0 0 8553700 4963200 3590500 2662 499 2910 4363 7025 7025 1 TALIHDGLAR GGVMDVNTALQEVLKTALIHDGLARGIREA QEVLKTALIHDGLARGIREAAKALDKRQAH K T A A R G 2 1 0 1 0 0 0 1 1 1 2 0 0 0 0 0 1 0 0 0 0 0 10 0 1065.5931 P25398 P25398 24 33 RPS12 40S ribosomal protein S12 yes yes 3 0.0069417 32.523 1 1.2969 1.7235 NaN 1 Median NaN NaN NaN 0 0 Median 1.2969 1.7235 NaN 1 0 Median 10768000 4127700 6639900 0 0 0 10768000 4127700 6639900 2663 748 2911 4364 7026 7026 1 TANSPGSGARPDPVR ______________________________ TANSPGSGARPDPVRSFNRWKKKHSHRQNK K T A V R S 2 2 1 1 0 0 0 2 0 0 0 0 0 0 3 2 1 0 0 1 0 0 15 1 1480.7383 Q86VR6;B4DKX3;E9PIF2;Q59EC7;Q13206 Q86VR6 4 18 DDX10 Probable ATP-dependent RNA helicase DDX10 yes no 3 1.3406E-05 64.454 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2664 475 2912 4365;4366 7027;7028 7027 685 0 TAQVPSPPR QQKSGVSITIDDPVRTAQVPSPPRGKISNI IDDPVRTAQVPSPPRGKISNIVHISNLVRP R T A P R G 1 1 0 0 0 1 0 0 0 0 0 0 0 0 3 1 1 0 0 1 0 0 9 0 951.51378 G3V3B0;Q69YJ6;B4DQZ7;S4R3H4;E7EQT4;Q9UKV3 G3V3B0 240 248 ACIN1;DKFZp667N107 Apoptotic chromatin condensation inducer in the nucleus yes no 2 1.2176E-09 82.171 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2665 491 2913 4367;4368;4369 7029;7030;7031;7032;7033 7030 720 0 TAQVPSPPRGK QQKSGVSITIDDPVRTAQVPSPPRGKISNI DPVRTAQVPSPPRGKISNIVHISNLVRPFT R T A G K I 1 1 0 0 0 1 0 1 0 0 0 1 0 0 3 1 1 0 0 1 0 0 11 1 1136.6302 G3V3B0;Q69YJ6;B4DQZ7;S4R3H4;E7EQT4;Q9UKV3 G3V3B0 240 250 ACIN1;DKFZp667N107 Apoptotic chromatin condensation inducer in the nucleus yes no 2 0.025935 47.288 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2666 491 2914 4370 7034;7035 7034 720 0 TASLELDLFPEAK RVGGSDEEASGIPSRTASLELDLFPEAKQK SRTASLELDLFPEAKQKRLAKSPGRKRKRW R T A A K Q 2 0 0 1 0 0 2 0 0 0 3 1 0 1 1 1 1 0 0 0 0 0 13 0 1432.745 H7C446 H7C446 130 142 PPAN yes yes 2 0.0044272 59.871 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2667 675 2915 4371 7036;7037 7036 1934 0 TASVLSKDDVAPESGDTTVK EKQKERKKKRQQARKTASVLSKDDVAPESG SKDDVAPESGDTTVKKPESKKEQTPEHGKK K T A V K K 2 0 0 3 0 0 1 1 0 0 1 2 0 0 1 3 3 0 0 3 0 0 20 1 2019.0008 O76021;J3QSV6;A0PJ61;Q32Q62 O76021 312 331 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 3 3.9557E-14 69.435 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2668 712 2916 4372 7038 7038 1069 0 TAVDGFQSESPEK SGIKILVPKSPVKSRTAVDGFQSESPEKLD SRTAVDGFQSESPEKLDPVEQGQEDTVAPE R T A E K L 1 0 0 1 0 1 2 1 0 0 0 1 0 1 1 2 1 0 0 1 0 0 13 0 1393.6361 Q9Y232 Q9Y232 207 219 CDYL Chromodomain Y-like protein yes yes 2 3.1688E-22 114.21 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2669 961 2917 4373;4374 7039;7040 7040 1727;1728 0 TAVDGFQSESPEKLDPVEQGQEDTVAPEVAAEK SGIKILVPKSPVKSRTAVDGFQSESPEKLD QGQEDTVAPEVAAEKPVGALLGPGAERARM R T A E K P 4 0 0 3 0 3 6 2 0 0 1 2 0 1 3 2 2 0 0 4 0 0 33 1 3499.6478 Q9Y232 Q9Y232 207 239 CDYL Chromodomain Y-like protein yes yes 3 2.3235E-60 112.75 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2670 961 2918 4375 7041 7041 1727;1728 0 TAVVVGTITDDVR SRMIRKMKLPGRENKTAVVVGTITDDVRVQ NKTAVVVGTITDDVRVQEVPKLKVCALRVT K T A V R V 1 1 0 2 0 0 0 1 0 1 0 0 0 0 0 0 3 0 0 4 0 0 13 0 1344.7249 F8VUA6;Q0QEW2;G3V203;H0YHA7;A0A024QZD1;J3QQ67;Q07020;F8VYV2;B4DDY5;A0A075B7A0 F8VUA6 27 39 RPL18 60S ribosomal protein L18 yes no 2 1.5805E-31 128.01 1 1 0.70439 0.93254 12.772 2 Median 0.69451 0.85201 NaN 1 0 Median 0.71441 1.0207 NaN 1 0 Median 242140000 136370000 105770000 88690000 47677000 41013000 153450000 88692000 64759000 2671 4 2919 4376;4377 7042;7043;7044;7045 7045 4 TCSPESQQIYGDIK QQEDPEKIQVQLCFKTCSPESQQIYGDIKD KTCSPESQQIYGDIKDVRLDGESQ______ K T C I K D 0 0 0 1 1 2 1 1 0 2 0 1 0 0 1 2 1 0 1 0 0 0 14 0 1624.7403 Q4VC44;B3KRZ0;I3L287;B3KPY2;B3KP60;J3KNW1 Q4VC44 694 707 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 yes no 2 5.0626E-85 151.38 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2672 833 2920 4378;4379 7046;7047;7048;7049;7050 7047 1380 0 TCSQVSSYSLEQESNGEIEHVTK LGVLPFTLNSGSPEKTCSQVSSYSLEQESN SLEQESNGEIEHVTKRAISTPEKSISDVTF K T C T K R 0 0 1 0 1 2 4 1 1 1 1 1 0 0 0 5 2 0 1 2 0 0 23 0 2611.1708 P42695;Q96FA6 P42695 1388 1410 NCAPD3 Condensin-2 complex subunit D3 yes no 3 3.7775E-10 50.055 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2673 759 2921 4380 7051 7051 1197;1198;1199 0 TCTTVAFTQVNSEDK IIKGKARLGRLVHRKTCTTVAFTQVNSEDK TCTTVAFTQVNSEDKGALAKLVEAIRTNYN K T C D K G 1 0 1 1 1 1 1 0 0 0 0 1 0 1 0 1 4 0 0 2 0 0 15 0 1699.7723 P62424;Q9BY74;Q5T8U2 P62424 198 212 RPL7A;RP-L7a 60S ribosomal protein L7a yes no 2 1.0287E-89 155.48 2 1 0.74678 0.88921 NaN 1 Median 0.74678 0.88921 NaN 1 0 Median NaN NaN NaN 0 0 Median 120550000 75264000 45290000 97461000 52171000 45290000 23092000 23092000 0 2674 789 2922 4381;4382;4383 7052;7053;7054;7055;7056;7057;7058 7054 7 TDDEDFVPSDASPPK MDLDSDEDFSDFDEKTDDEDFVPSDASPPK TDDEDFVPSDASPPKTKTSPKLSNKELKPQ K T D P K T 1 0 0 4 0 0 1 0 0 0 0 1 0 1 3 2 1 0 0 1 0 0 15 0 1618.6999 P11388 P11388 1343 1357 TOP2A DNA topoisomerase 2-alpha yes yes 2 9.1587E-109 164.64 2 4 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2675 734 2923;2924 4384;4385;4386;4387;4388;4389 7059;7060;7061;7062;7063;7064;7065;7066;7067;7068;7069;7070;7071;7072;7073;7074;7075;7076;7077;7078;7079;7080;7081;7082;7083;7084;7085;7086;7087 7061 1146;1147 0 TDGSISGDRQPVTVADYISR QRRNRSRRRRNRGNRTDGSISGDRQPVTVA SGDRQPVTVADYISRAESQSRQRPPLERTK R T D S R A 1 2 0 3 0 1 0 2 0 2 0 0 0 0 1 3 2 0 1 2 0 0 20 1 2136.0447 P51116 P51116 598 617 FXR2 Fragile X mental retardation syndrome-related protein 2 yes yes 3 1.5486E-08 56.298 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2676 772 2925 4390;4391 7088;7089 7089 1255;1256 0 TDHPEIGEGKPTPALSEEASSSSIR LSVPAPAVQPEESLKTDHPEIGEGKPTPAL PTPALSEEASSSSIRERPPEEVAARLAQQE K T D I R E 2 1 0 1 0 0 4 2 1 2 1 1 0 0 3 5 2 0 0 0 0 0 25 1 2594.246 Q05DN3;B4DS66;B4DKR1;Q16891 Q05DN3 168 192 IMMT MICOS complex subunit MIC60 yes no 4 0.028094 7.5183 1 1.7914 2.3576 NaN 1 Median NaN NaN NaN 0 0 Median 1.7914 2.3576 NaN 1 0 Median 8121200 2762600 5358600 0 0 0 8121200 2762600 5358600 2677 472 2926 4392 7090 7090 1 TDLSTTVATPSSGLK PPPDPQLLVSESSQRTDLSTTVATPSSGLK TDLSTTVATPSSGLKKRPISRLQTRKNKKL R T D L K K 1 0 0 1 0 0 0 1 0 0 2 1 0 0 1 3 4 0 0 1 0 0 15 0 1476.7672 Q03164;B4E012 Q03164 3205 3219 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes no 2 3.6307E-18 90.725 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2678 798 2927 4393 7091 7091 1297;1298 0 TDNSSLSSPLNPK KNTGSPDRKPSKKSKTDNSSLSSPLNPKLW SKTDNSSLSSPLNPKLWCHVHLKKSLSGSP K T D P K L 0 0 2 1 0 0 0 0 0 0 2 1 0 0 2 4 1 0 0 0 0 0 13 0 1358.6678 Q9UIG0 Q9UIG0 323 335 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 2 1.0107E-87 141.54 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2679 952 2928;2929 4394;4395;4396 7092;7093;7094;7095;7096;7097;7098;7099 7092 1705;1706 0 TDQADGPREPPQSAR ASSPETPSAGQQEAKTDQADGPREPPQSAR TDQADGPREPPQSARRKRSYKQAVSELDEE K T D A R R 2 2 0 2 0 2 1 1 0 0 0 0 0 0 3 1 1 0 0 0 0 0 15 1 1623.7601 Q9NQS7;B3KPD3 Q9NQS7 434 448 INCENP Inner centromere protein yes no 3 2.6555E-09 78.069 2 0.83053 1.2228 0.9324 2 Median NaN NaN NaN 0 0 Median 0.83053 1.2228 0.9324 2 0 Median 51913000 30845000 21068000 0 0 0 51913000 30845000 21068000 2680 932 2930 4397;4398 7100;7101;7102;7103 7103 4 TDSQSVRHSPIAPSSPSPQVLAQK APILPDNFSTPTGSRTDSQSVRHSPIAPSS PIAPSSPSPQVLAQKYSLVAKQESVVRRAS R T D Q K Y 2 1 0 1 0 3 0 0 1 1 1 1 0 0 4 6 1 0 0 2 0 0 24 1 2516.2983 Q9NQS7;B3KPD3 Q9NQS7 298 321 INCENP Inner centromere protein yes no 3;4 1.9164E-202 160.86 3 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2681 932 2931;2932 4399;4400;4401;4402 7104;7105;7106;7107;7108;7109;7110;7111 7110 1633;1634;1635;1636 0 TDSREDEISPPPPNPVVK EEAKQIQNLQKAGTRTDSREDEISPPPPNP REDEISPPPPNPVVKGRRRRGAISAEVYTE R T D V K G 0 1 1 2 0 0 2 0 0 1 0 1 0 0 5 2 1 0 0 2 0 0 18 1 1975.9851 K7EMU2;K7EMZ6;A6YCE1;K7EIE5;K7EID3;K7EJ40;K7EK41;K7EPB2;Q68DQ4;B2R5T5;Q15300;P10644 K7EMU2 75 92 PRKAR1A;PRKAR1A/RARA fusion;DKFZp779L0468;RET/PTC2 cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes no 3 2.1609E-08 66.644 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2682 330 2933 4403 7112;7113 7112 503 0 TDSVIIADQTPTPTR HKHKHEMTLKFGPARTDSVIIADQTPTPTR TDSVIIADQTPTPTRFLKNCEEVGLFNELA R T D T R F 1 1 0 2 0 1 0 0 0 2 0 0 0 0 2 1 4 0 0 1 0 0 15 0 1613.8261 K7ESA4;K7ELQ4;B2R8U0;P17544 K7ESA4 42 56 ATF7 Cyclic AMP-dependent transcription factor ATF-7 yes no 2 0.001804 40.237 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2683 409 2934 4404 7114 7114 1866;1867;1868 0 TEAEQQITEVFVLAER PENKGISLRSRRQNKTEAEQQITEVFVLAE EAEQQITEVFVLAERIEINRNEKKPMKTSP K T E E R I 2 1 0 0 0 2 4 0 0 1 1 0 0 1 0 0 2 0 0 2 0 0 16 0 1861.9422 P46013;B4DRH3 P46013 3099 3114 MKI67 Antigen KI-67 yes no 2 2.9452E-48 136.27 1 0.913 1.1718 NaN 1 Median 0.913 1.1718 NaN 1 0 Median NaN NaN NaN 0 0 Median 8466100 4429500 4036500 8466100 4429500 4036500 0 0 0 2684 762 2935 4405 7115;7116 7116 2 TEAFTSPEALQPGGTALAPK KLMNSKKLSSTDCFKTEAFTSPEALQPGGT SPEALQPGGTALAPKKRSRKGRAGAHGLSK K T E P K K 4 0 0 0 0 1 2 2 0 0 2 1 0 1 3 1 3 0 0 0 0 0 20 0 1985.0106 Q7Z5J4 Q7Z5J4 1426 1445 RAI1 Retinoic acid-induced protein 1 yes yes 2 1.0702E-14 79.393 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2685 870 2936 4406;4407 7117;7118;7119 7118 1454;2015 0 TEAHQDVVGR KQLYTVTMDVHSRYRTEAHQDVVGRFNERF HSRYRTEAHQDVVGRFNERFILSLASCKKC R T E G R F 1 1 0 1 0 1 1 1 1 0 0 0 0 0 0 0 1 0 0 2 0 0 10 0 1110.5418 Q9H0A0;E9PMU0;A0A087WV29;Q05CW7 Q9H0A0 173 182 NAT10 N-acetyltransferase 10 no no 3 0.022844 25.527 1 0.61011 0.73551 NaN 1 Median NaN NaN NaN 0 0 Median 0.61011 0.73551 NaN 1 0 Median 3538700 2120300 1418400 0 0 0 3538700 2120300 1418400 2686 924;801 2937 4408 7120;7121 7121 2 TEDGGEFEEGASENNAK GMAFEEPIDEKKFEKTEDGGEFEEGASENN DGGEFEEGASENNAKESSPEKEAEEGCPEK K T E A K E 2 0 2 1 0 0 5 3 0 0 0 1 0 1 0 1 1 0 0 0 0 0 17 0 1782.718 O43719;B4DRS4 O43719 434 450 HTATSF1 HIV Tat-specific factor 1 yes no 2 4.8828E-28 119.46 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2687 702 2938 4409 7122;7123 7122 1038 0 TEEIAEEEETVFPK QTEEKEKKEKPKSDKTEEIAEEEETVFPKA KTEEIAEEEETVFPKAKQVKKKAEPSEVDM K T E P K A 1 0 0 0 0 0 6 0 0 1 0 1 0 1 1 0 2 0 0 1 0 0 14 0 1649.7672 Q9NR30;Q3SWU7 Q9NR30 41 54 DDX21 Nucleolar RNA helicase 2 yes no 2 0.0012889 46.352 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 7406900 7406900 0 0 0 0 7406900 7406900 0 2688 934 2939 4410 7124 7124 1 TEELIESPKLESSEGEIIQTVDR SSLVEITEHKDFTLKTEELIESPKLESSEG KLESSEGEIIQTVDRQSVKSPEVQLLGHVE K T E D R Q 0 1 0 1 0 1 6 1 0 3 2 1 0 0 1 3 2 0 0 1 0 0 23 1 2601.3021 Q05BS8;A0A0A0MTP7;B4DZM2;B2RA91;F8VXG7;Q99590 Q05BS8 499 521 SFRS2IP;SCAF11 Protein SCAF11 yes no 3 4.0482E-16 69.922 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2689 229 2940 4411 7125;7126;7127 7126 320;321;322 0 TEELNREVATNSELVQSGK AEKNRKDAEEWFFTKTEELNREVATNSELV NREVATNSELVQSGKSEISELRRTMQNLEI K T E G K S 1 1 2 0 0 1 4 1 0 0 2 1 0 0 0 2 2 0 0 2 0 0 19 1 2103.0444 CON__P02533;P02533;A0A024R1X6;Q14666;F5GWP8;CON__Q04695;CON__Q9QWL7;Q04695;K7ESE1 CON__P02533 310 328 KRT14;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 yes no 3 1.0769E-10 75.55 1 0.31039 0.39279 NaN 1 Median 0.31039 0.39279 NaN 1 0 Median NaN NaN NaN 0 0 Median 4777800 3664400 1113400 4777800 3664400 1113400 0 0 0 + 2690 571 2941 4412 7128 7128 1 TEGTAHSSNTSDVDFTGASSAK ISENPTLDLPCSIGRTEGTAHSSNTSDVDF SNTSDVDFTGASSAKETTSSSISRHYGLSD R T E A K E 3 0 1 2 0 0 1 2 1 0 0 1 0 1 0 5 4 0 0 1 0 0 22 0 2168.9458 B4DZG1;Q96G26;Q9Y483 B4DZG1 340 361 MTF2 Metal-response element-binding transcription factor 2 yes no 3 0.00054412 45.395 1 1 0.73029 0.90945 NaN 1 Median NaN NaN NaN 0 0 Median 0.73029 0.90945 NaN 1 0 Median 16749000 5949500 10799000 6965100 0 6965100 9783500 5949500 3834000 2691 512 2942 4413;4414 7129;7130 7129 1 TEIIILATR EDGYSGVEVRVTPTRTEIIILATRTQNVLG RVTPTRTEIIILATRTQNVLGEKGRRIREL R T E T R T 1 1 0 0 0 0 1 0 0 3 1 0 0 0 0 0 2 0 0 0 0 0 9 0 1028.623 E9PPU1;H0YEU2;E9PL09;Q53G83;P23396;E9PQ96;E9PJH4;F2Z2S8;H0YF32;E9PK82;H0YCJ7 E9PPU1 46 54 RPS3 40S ribosomal protein S3 yes no 2 0.0076804 59.35 1 1.7086 2.2111 NaN 1 Median NaN NaN NaN 0 0 Median 1.7086 2.2111 NaN 1 0 Median 21163000 7239700 13923000 0 0 0 21163000 7239700 13923000 2692 625 2943 4415 7131;7132 7131 2 TEIMSPLYQDEAPK QQKQQLPQTPPSCLKTEIMSPLYQDEAPKG KTEIMSPLYQDEAPKGTEASSGTEAATGLE K T E P K G 1 0 0 1 0 1 2 0 0 1 1 1 1 0 2 1 1 0 1 0 0 0 14 0 1620.7705 B4DKU3;Q8IY81 B4DKU3 459 472 FTSJ3 pre-rRNA processing protein FTSJ3 yes no 2 2.2736E-15 104.09 3 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2693 474 2944;2945 4416;4417;4418;4419;4420 7133;7134;7135;7136;7137;7138;7139;7140 7134 93 683 0 TEKPPPEPGKPK CCEHDLGAASVRSTKTEKPPPEPGKPKGKR STKTEKPPPEPGKPKGKRRRRRGWRRVTEG K T E P K G 0 0 0 0 0 0 2 1 0 0 0 3 0 0 5 0 1 0 0 0 0 0 12 2 1303.7136 O96028 O96028 1338 1349 WHSC1 Histone-lysine N-methyltransferase NSD2 yes yes 3 0.0029129 45.183 1 0.74334 1.0734 NaN 1 Median NaN NaN NaN 0 0 Median 0.74334 1.0734 NaN 1 0 Median 20130000 11431000 8699300 0 0 0 20130000 11431000 8699300 2694 724 2946 4421 7141 7141 1 TELEDTLDSTAAQQELR EKQKRDLGEELEALKTELEDTLDSTAAQQE LEDTLDSTAAQQELRSKREQEVNILKKTLE K T E L R S 2 1 0 2 0 2 3 0 0 0 3 0 0 0 0 1 3 0 0 0 0 0 17 0 1918.912 A0A024R1N1;A0A0U4BW16;P35579;Q86XU5 A0A024R1N1 1146 1162 MYH9 Myosin-9 yes no 2 0.024478 25.647 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2938500 0 2938500 0 0 0 2938500 0 2938500 2695 32 2947 4422 7142 7142 1 TEPACVSPIQNSAPVSDLTK PNRNALTSITNVEPKTEPACVSPIQNSAPV VSPIQNSAPVSDLTKTEHPKSSFRIHRMRR K T E T K T 2 0 1 1 1 1 1 0 0 1 1 1 0 0 3 3 2 0 0 2 0 0 20 0 2113.0361 B4E3J2;F5H586;Q5H9S4;H0Y6W5;D3DRJ1;B4DR27;B1APH0;Q6ZN30 B4E3J2 223 242 BNC2;DKFZp686A01127;hCG_27250 Zinc finger protein basonuclin-2 yes no 2 1.9583E-11 63.29 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2696 395 2948 4423 7143;7144 7143 593 0 TEPSSPLSDPSDIIR TDREGASPVTEVRIKTEPSSPLSDPSDIIR TEPSSPLSDPSDIIRVTVGDAATTAAASSS K T E I R V 0 1 0 2 0 0 1 0 0 2 1 0 0 0 3 4 1 0 0 0 0 0 15 0 1612.7944 Q5H9S0;B4DTN6;Q9ULJ3 Q5H9S0 431 445 DKFZp781N1974;ZBTB21 Zinc finger and BTB domain-containing protein 21 yes no 2 0.0004641 55.452 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2697 499 2949;2950 4424;4425 7145;7146;7147 7146 737;738;739 0 TEQEEDEELLTESSK EKQNLLSVGDYRHRRTEQEEDEELLTESSK TEQEEDEELLTESSKATNVCTRFEDSPSYV R T E S K A 0 0 0 1 0 1 6 0 0 0 2 1 0 0 0 2 2 0 0 0 0 0 15 0 1765.7741 B7ZAX9;B4DZC0;O60264;Q4W5G3 B7ZAX9 89 103 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes no 2 2.0673E-06 71.607 1 2.7173 3.3437 NaN 1 Median 2.7173 3.3437 NaN 1 0 Median NaN NaN NaN 0 0 Median 5431200 1732100 3699100 5431200 1732100 3699100 0 0 0 2698 510 2951 4426 7148 7148 1 TEQFYR ICLFTKDEPNSTPEKTEQFYRKLLNKHGIK DEPNSTPEKTEQFYRKLLNKHGIKTVSQII K T E Y R K 0 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 6 0 842.39227 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L234;I3L3C4 O76021 110 115 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 2 0.0017357 91.584 1 0.35501 0.49386 NaN 1 Median NaN NaN NaN 0 0 Median 0.35501 0.49386 NaN 1 0 Median 69252000 50361000 18891000 0 0 0 69252000 50361000 18891000 2699 712 2952 4427 7149;7150 7150 2 TEQFYRK ICLFTKDEPNSTPEKTEQFYRKLLNKHGIK EPNSTPEKTEQFYRKLLNKHGIKTVSQIIS K T E R K L 0 1 0 0 0 1 1 0 0 0 0 1 0 1 0 0 1 0 1 0 0 0 7 1 970.48723 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L234;I3L3C4 O76021 110 116 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 2 0.017178 87.284 1 0.33392 0.50269 NaN 1 Median NaN NaN NaN 0 0 Median 0.33392 0.50269 NaN 1 0 Median 26264000 18878000 7386300 0 0 0 26264000 18878000 7386300 2700 712 2953 4428 7151 7151 1 TEQGGAHFSVSSLAEGSVTSVGSVNPAENFR FQDNHEDGPTAKKLKTEQGGAHFSVSSLAE SVTSVGSVNPAENFRVLVKQKKASFEEASN K T E F R V 3 1 2 0 0 1 3 4 1 0 1 0 0 2 1 6 2 0 0 4 0 0 31 0 3120.4748 Q53T09;P13010 Q53T09 405 435 XRCC5 X-ray repair cross-complementing protein 5 yes no 3 5.0548E-29 70.632 2 0.50344 0.70356 4.3231 2 Median NaN NaN NaN 0 0 Median 0.50344 0.70356 4.3231 2 0 Median 180240000 119290000 60946000 0 0 0 180240000 119290000 60946000 2701 735 2954 4429;4430 7152;7153;7154 7153 3 TESPATAAETASEELDNR DGASSDAEPEPPSGRTESPATAAETASEEL PATAAETASEELDNRSLEEILNSIPPPPPP R T E N R S 4 1 1 1 0 0 4 0 0 0 1 0 0 0 1 2 3 0 0 0 0 0 18 0 1890.8443 Q9NTJ3;Q6NSG3;Q58F29;Q6P169;C9JR83;C9JWF0;C9IYK2;C9JJ64 Q9NTJ3 39 56 SMC4 Structural maintenance of chromosomes protein 4 yes no 2 0 334.51 4 7 0.55209 0.71072 40.81 2 Median 0.74998 0.94847 NaN 1 0 Median 0.40641 0.53257 NaN 1 0 Median 29573000 19212000 10361000 4571500 2253100 2318400 25002000 16959000 8042100 2702 941 2955;2956;2957 4431;4432;4433;4434;4435;4436;4437;4438;4439;4440;4441 7155;7156;7157;7158;7159;7160;7161;7162;7163;7164;7165;7166;7167;7168;7169;7170;7171;7172;7173;7174;7175;7176;7177;7178;7179;7180;7181 7159 1674;1675;2049;2050 5 TETSETEITTTEIIK DDMAAKAPPGGGTTRTETSETEITTTEIIK TETSETEITTTEIIKRRDVGPYGIRSEYCI R T E I K R 0 0 0 0 0 0 4 0 0 3 0 1 0 0 0 1 6 0 0 0 0 0 15 0 1694.8462 F5GXF5;E7ETD6;Q12830 F5GXF5 1872 1886 BPTF Nucleosome-remodeling factor subunit BPTF yes no 2 1.3874E-225 196.24 1 1 0.77014 0.95764 20.931 2 Median 0.66315 0.82589 NaN 1 0 Median 0.89439 1.1104 NaN 1 0 Median 47869000 25880000 21989000 18789000 10735000 8054000 29080000 15145000 13935000 2703 607 2958 4442;4443 7182;7183;7184;7185 7183 4 TFKESPKQILDPAAR THTHREPAGDGKSIRTFKESPKQILDPAAR TFKESPKQILDPAARVTGMKKWPRTPKEEA R T F A R V 2 1 0 1 0 1 1 0 0 1 1 2 0 1 2 1 1 0 0 0 0 0 15 2 1699.9257 P46013 P46013 1067 1081 MKI67 Antigen KI-67 yes yes 3 0.000363 47.532 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2704 762 2959 4444 7186 7186 1226 0 TFLHTVQR PSSPCPASKVVRPLRTFLHTVQRNQMLMTP KVVRPLRTFLHTVQRNQMLMTPTSAPRSVM R T F Q R N 0 1 0 0 0 1 0 0 1 0 1 0 0 1 0 0 2 0 0 1 0 0 8 0 1000.5454 Q9NQS7;B3KPD3 Q9NQS7 494 501 INCENP Inner centromere protein yes no 3 0.022938 31.934 1 0.73143 0.96989 NaN 1 Median NaN NaN NaN 0 0 Median 0.73143 0.96989 NaN 1 0 Median 10994000 7016600 3977300 0 0 0 10994000 7016600 3977300 2705 932 2960 4445 7187 7187 1 TFNEPGSPIVK SSLMWEVRYIEHNTRTFNEPGSPIVKSAKF HNTRTFNEPGSPIVKSAKFVTDLLLHFIKD R T F V K S 0 0 1 0 0 0 1 1 0 1 0 1 0 1 2 1 1 0 0 1 0 0 11 0 1187.6186 Q8WWQ0;Q9NWP3 Q8WWQ0 1237 1247 PHIP PH-interacting protein yes no 2 1.1835E-08 76.326 1 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2706 894 2961 4446;4447;4448 7188;7189;7190;7191;7192 7192 1509 0 TFVLTPELSPGK PIGDLQPLPIQKGEKTFVLTPELSPGKLQV GEKTFVLTPELSPGKLQVLPFEKASVCHYH K T F G K L 0 0 0 0 0 0 1 1 0 0 2 1 0 1 2 1 2 0 0 1 0 0 12 0 1287.7075 Q96DY7 Q96DY7 631 642 MTBP Mdm2-binding protein yes yes 2 0.0077845 54.524 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2707 900 2962 4449;4450 7193;7194 7194 1539 0 TFYEKR GCQKLIEVDDERKLRTFYEKRMATEVAADA EVDDERKLRTFYEKRMATEVAADALGEEWK R T F K R M 0 1 0 0 0 0 1 0 0 0 0 1 0 1 0 0 1 0 1 0 0 0 6 1 842.42865 Q96DV6;A2A3R6;P62753;A2A3R7 Q96DV6 26 31 RPS6 40S ribosomal protein S6 yes no 2 0.0083564 57.463 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 5955800 5955800 0 0 0 0 5955800 5955800 0 2708 303 2963 4451 7195 7195 1 TGAAPIIDVVR TLVSEQTRVNAAKNKTGAAPIIDVVRS___ AKNKTGAAPIIDVVRS______________ K T G V R S 2 1 0 1 0 0 0 1 0 2 0 0 0 0 1 0 1 0 0 2 0 0 11 0 1110.6397 Q9BQQ5;E9PLL6;Q6NZ52;P46776;E9PJD9;E9PLX7 Q9BQQ5 95 105 L27a;RPL27A 60S ribosomal protein L27a yes no 2 0.0019971 77.379 1 0.24242 0.31643 NaN 1 Median NaN NaN NaN 0 0 Median 0.24242 0.31643 NaN 1 0 Median 23977000 19574000 4403400 0 0 0 23977000 19574000 4403400 2709 626 2964 4452 7196;7197 7196 2 TGDLGIPPNPEDRSPSPEPIYNSEGK YIVQLQIEDLTRKLRTGDLGIPPNPEDRSP DRSPSPEPIYNSEGKRLNTREFRTRKKLEE R T G G K R 0 1 2 2 0 0 3 3 0 2 1 1 0 0 6 3 1 0 1 0 0 0 26 1 2765.3144 A0A024R588;A0A024R566;A0A024R5D9;A0A024R572;Q15637 A0A024R588 67 92 SF1 Splicing factor 1 yes no 3 1.7765E-13 52.237 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2710 68 2965 4453 7198 7198 82;83 0 TGHYLTVK ALVTGYFMQVAHLERTGHYLTVKDNQVVQL QVAHLERTGHYLTVKDNQVVQLHPSTVLDH R T G V K D 0 0 0 0 0 0 0 1 1 0 1 1 0 0 0 0 2 0 1 1 0 0 8 0 917.49707 B4E0S6;O43143 B4E0S6 696 703 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 2 1.3014E-07 111.17 1 0.88555 1.1044 NaN 1 Median NaN NaN NaN 0 0 Median 0.88555 1.1044 NaN 1 0 Median 34441000 19426000 15016000 0 0 0 34441000 19426000 15016000 2711 516 2966 4454 7199;7200 7200 2 TGLLFSPDVDEK LANQQSLKNRIESVKTGLLFSPDVDEKLPK SVKTGLLFSPDVDEKLPKKGSEKISKSEET K T G E K L 0 0 0 2 0 0 1 1 0 0 2 1 0 1 1 1 1 0 0 1 0 0 12 0 1319.6609 Q6P4F7;H3BQ41;H3BR51 Q6P4F7 479 490 ARHGAP11A Rho GTPase-activating protein 11A yes no 2 0.0019958 60.401 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2712 861 2967 4455 7201;7202 7202 1430 0 TGNAWHSK KEDAIEHFMKLYEEKTGNAWHSKNFTKYPK MKLYEEKTGNAWHSKNFTKYPKKFYPLEID K T G S K N 1 0 1 0 0 0 0 1 1 0 0 1 0 0 0 1 1 1 0 0 0 0 8 0 899.42496 A0A024R3T8;P09874;B2R5W3;B4E0E1 A0A024R3T8 622 629 PARP1 Poly [ADP-ribose] polymerase 1 yes no 2 0.00011842 96.027 1 0.34793 0.46399 NaN 1 Median NaN NaN NaN 0 0 Median 0.34793 0.46399 NaN 1 0 Median 5384700 3474100 1910600 0 0 0 5384700 3474100 1910600 2713 56 2968 4456 7203 7203 1 TGPLSAQPSVEK SELSEKPAESVTSKKTGPLSAQPSVEKENL SKKTGPLSAQPSVEKENLAIESQS______ K T G E K E 1 0 0 0 0 1 1 1 0 0 1 1 0 0 2 2 1 0 0 1 0 0 12 0 1212.635 D6R9S4;Q09GN1;A5D8X7;Q71F23 D6R9S4 157 168 CENPU;MLF1IP Centromere protein U yes no 2 0.0017836 61.409 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2714 320 2969 4457;4458 7204;7205;7206 7205 486 0 TGQAGSLSGSPKPFSPQLSAPITTK MDFLDKSTASPASTKTGQAGSLSGSPKPFS PKPFSPQLSAPITTKTDKTSTTGSILNLNL K T G T K T 2 0 0 0 0 2 0 3 0 1 2 2 0 1 4 5 3 0 0 0 0 0 25 1 2456.2911 A0A087WYS3;H7C4X9;A0A087WVZ6;Q9ULU4;A0A087WV57;A6H8Y8;Q5JV90 A0A087WYS3 481 505 ZMYND8;DKFZp564P1772 Protein kinase C-binding protein 1 yes no 3 3.6687E-23 79.843 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2715 190 2970 4459 7207 7207 275;276 0 TGSPGPELLFHEGQQK KTNCCDQCGAYIYTKTGSPGPELLFHEGQQ GSPGPELLFHEGQQKRFCNTTCLGAYKKVG K T G Q K R 0 0 0 0 0 2 2 3 1 0 2 1 0 1 2 1 1 0 0 0 0 0 16 0 1723.8529 A8K3Z7;A6NL54;A6NHN7;A6NHB5;Q14202 A8K3Z7 462 477 ZMYM3 Zinc finger MYM-type protein 3 yes no 2;3 4.3094E-19 110.84 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2716 326 2971 4460;4461;4462;4463 7208;7209;7210;7211;7212;7213;7214;7215;7216 7212 498 0 TGSPTFVR GSSKGHDTHKGKPVKTGSPTFVRELRSRTF HKGKPVKTGSPTFVRELRSRTFDSSDEVIL K T G V R E 0 1 0 0 0 0 0 1 0 0 0 0 0 1 1 1 2 0 0 1 0 0 8 0 863.45012 Q9UPP1;B0QZZ4;Q5JPR8;B0QZZ2;B0QZZ3;B0QZE1 Q9UPP1 118 125 PHF8 Histone lysine demethylase PHF8 yes no 2 0.0021092 84.213 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2717 960 2972 4464;4465 7217;7218;7219 7218 1725 0 TGTITTFEHAHNMR GNIVGLVGVDQFLVKTGTITTFEHAHNMRV KTGTITTFEHAHNMRVMKFSVSPVVRVAVE K T G M R V 1 1 1 0 0 0 1 1 2 1 0 0 1 1 0 0 4 0 0 0 0 0 14 0 1614.7573 Q8TA90;P13639;Q6PK56 Q8TA90 141 154 EEF2 Elongation factor 2 yes no 3 0.00071619 54.898 1 5.3662 6.9426 NaN 1 Median NaN NaN NaN 0 0 Median 5.3662 6.9426 NaN 1 0 Median 14165000 2551800 11613000 0 0 0 14165000 2551800 11613000 2718 736 2973 4466 7220 7220 166 1 TGTIVVEGHELHDEDIR SIKQLSSEELEQFQKTGTIVVEGHELHDED TIVVEGHELHDEDIRLMYTFDQATGGTAQF K T G I R L 0 1 0 2 0 0 3 2 2 2 1 0 0 0 0 0 2 0 0 2 0 0 17 0 1918.9385 Q9P1N9;Q7L4K8;B4DVX2;Q7Z355;J3KR24;Q7Z3U5;A0A0A0MSX9;Q59G75;P41252 Q9P1N9 32 48 IARS;DKFZp686L17145;DKFZp686L0869 Isoleucine--tRNA ligase, cytoplasmic yes no 3 0.0040024 25.957 1 0.49869 0.63358 NaN 1 Median 0.49869 0.63358 NaN 1 0 Median NaN NaN NaN 0 0 Median 6169200 3482900 2686400 6169200 3482900 2686400 0 0 0 2719 222 2974 4467 7221;7222 7222 2 TGVHHYSGNNIELGTACGK ALRKSEIEYYAMLAKTGVHHYSGNNIELGT HYSGNNIELGTACGKYYRVCTLAIIDPGDS K T G G K Y 1 0 2 0 1 0 1 4 2 1 1 1 0 0 0 1 2 0 1 1 0 0 19 0 2013.9327 E5RI99;A0A024R9D3;P62888;A0A0B4J213 E5RI99 69 87 RPL30 60S ribosomal protein L30 yes no 3;4 5.1934E-11 74.12 2 0.84851 1.0253 8.494 2 Median 0.84851 1.0253 8.494 2 0 Median NaN NaN NaN 0 0 Median 109470000 58155000 51316000 109470000 58155000 51316000 0 0 0 2720 115 2975 4468;4469 7223;7224;7225;7226 7223 4 THDHQLESSLSPVEVFAK TRSEIIDEKGPVMSKTHDHQLESSLSPVEV HQLESSLSPVEVFAKTSASLEMNQGVSEER K T H A K T 1 0 0 1 0 1 2 0 2 0 2 1 0 1 1 3 1 0 0 2 0 0 18 0 2023.0011 Q5JW53;A8K3X3;Q9H410 Q5JW53 20 37 DSN1 Kinetochore-associated protein DSN1 homolog yes no 3 1.9553E-07 62.611 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2721 350 2976 4470;4471 7227;7228 7228 533;534 0 THEAEIVEGENHTYCIR SIQDMTAQVTSPSGKTHEAEIVEGENHTYC EAEIVEGENHTYCIRFVPAEMGTHTVSVKY K T H I R F 1 1 1 0 1 0 4 1 2 2 0 0 0 0 0 0 2 0 1 1 0 0 17 0 2056.9273 Q5HY54;Q60FE6;Q60FE5;P21333;B4DTD5;Q96C61;Q6NXF2;Q8TES4;Q2VP91;B4E2F9;H0Y5C6 Q5HY54 2145 2161 FLNA;FLJ00119 Filamin-A yes no 3 1.15E-05 50.387 1 1.1437 1.465 NaN 1 Median 1.1437 1.465 NaN 1 0 Median NaN NaN NaN 0 0 Median 9204100 4333100 4870900 9204100 4333100 4870900 0 0 0 2722 746 2977 4472 7229 7229 1 THLSLSHNPEQK YTKQGFGNLPICMAKTHLSLSHNPEQKGVP MAKTHLSLSHNPEQKGVPTGFILPIRDIRA K T H Q K G 0 0 1 0 0 1 1 0 2 0 2 1 0 0 1 2 1 0 0 0 0 0 12 0 1389.7001 A0A024R652;F5H2F4;B7Z809;P11586;V9GYY3 A0A024R652 867 878 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 3 0.023879 22.493 1 0.47885 0.59542 NaN 1 Median 0.47885 0.59542 NaN 1 0 Median NaN NaN NaN 0 0 Median 4025000 2442600 1582500 4025000 2442600 1582500 0 0 0 2723 79 2978 4473 7230 7230 1 THNIGFDK SRPLEGKKSLSLSAKTHNIGFDKDSCHSTT SLSLSAKTHNIGFDKDSCHSTTKTEASQEE K T H D K D 0 0 1 1 0 0 0 1 1 1 0 1 0 1 0 0 1 0 0 0 0 0 8 0 930.45593 A6H8Z4;A0A024R250;Q76FK4;B4DM91;F8WE42;Q6AI50;F5H101 A6H8Z4 620 627 NOL8;DKFZp686P12242 Nucleolar protein 8 yes no 2 0.022661 51.528 1 0.44323 0.58477 NaN 1 Median NaN NaN NaN 0 0 Median 0.44323 0.58477 NaN 1 0 Median 14258000 9209500 5048800 0 0 0 14258000 9209500 5048800 2724 42 2979 4474 7231 7231 1 THSGEKPFLCPR GKGFTQLSSYQSHERTHSGEKPFLCPRCGR HERTHSGEKPFLCPRCGRMFSDPSSFRRHQ R T H P R C 0 1 0 0 1 0 1 1 1 0 1 1 0 1 2 1 1 0 0 0 0 0 12 1 1427.698 B2RDP4;A8K1I4;A0A024QZD9;Q96K58 B2RDP4 273 284 ZNF668 Zinc finger protein 668 yes no 3 0.0013647 47.201 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2725 5 2980 4475 7232 7232 9 0 THTIQGTIK QNWLIYTYGVTNSGKTHTIQGTIKDGGILP VTNSGKTHTIQGTIKDGGILPRSLALIFNS K T H I K D 0 0 0 0 0 1 0 1 1 2 0 1 0 0 0 0 3 0 0 0 0 0 9 0 997.55564 O95235;D6RBN1 O95235 167 175 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein yes no 2 2.4049E-06 82.75 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3817700 0 3817700 0 0 0 3817700 0 3817700 2726 716 2981 4476 7233 7233 1 THTTALAGRSPSPASGR SSDTSRSRSRSAAAKTHTTALAGRSPSPAS TTALAGRSPSPASGRRGEGDAPFSEPGTTS K T H G R R 3 2 0 0 0 0 0 2 1 0 1 0 0 0 2 3 3 0 0 0 0 0 17 1 1665.8547 A0A140VK53;Q9UQ35;I3L4D8;I3L182;Q9UQ39;I3L1I8;A0A087X1W1 A0A140VK53 286 302 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 3 1.0496E-05 54.271 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2727 284 2982 4477 7234 7234 421;422 0 THYPDVFAR FTQEQIEALEKEFERTHYPDVFARERLAAK EKEFERTHYPDVFARERLAAKIDLPEARIQ R T H A R E 1 1 0 1 0 0 0 0 1 0 0 0 0 1 1 0 1 0 1 1 0 0 9 0 1104.5352 Q59GD2;D1KF47;Q66SS1;B3KQG1;F1T0F8;D3DQZ8;P26367 Q59GD2 195 203 PAX6 Paired box protein Pax-6 yes no 2 0.0056318 62.546 1 0.51647 0.69131 NaN 1 Median NaN NaN NaN 0 0 Median 0.51647 0.69131 NaN 1 0 Median 9762900 6867100 2895700 0 0 0 9762900 6867100 2895700 2728 440 2983 4478 7235 7235 1 TIAHSPTSFTESSSK VEPDINSTVEHDENRTIAHSPTSFTESSSK TIAHSPTSFTESSSKESQNTAEIISPPSPD R T I S K E 1 0 0 0 0 0 1 0 1 1 0 1 0 1 1 5 3 0 0 0 0 0 15 0 1578.7526 Q03164 Q03164 2094 2108 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes yes 2 1.617E-74 150.76 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2729 798 2984;2985 4479;4480;4481;4482 7236;7237;7238;7239;7240 7239 1299;1300;1994 0 TICTFDSSGFESMSPIK ISLPLPSTSQKAKRRTICTFDSSGFESMSP CTFDSSGFESMSPIKETVSSRQKPQMAPPV R T I I K E 0 0 0 1 1 0 1 1 0 2 0 1 1 2 1 4 2 0 0 0 0 0 17 0 1905.8489 E9PEI0;Q69YH5;A8K8Z0;B3KRS8 E9PEI0 908 924 CDCA2 Cell division cycle-associated protein 2 yes no 2 4.2366E-05 48.532 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2730 615 2986 4483 7241;7242 7242 130 937;938 0 TIEQNINNLNVSEADRK TTKKAVKPKKKHLHRTIEQNINNLNVSEAD EQNINNLNVSEADRKCEIDPMFQKTAASFD R T I R K C 1 1 4 1 0 1 2 0 0 2 1 1 0 0 0 1 1 0 0 1 0 0 17 1 1956.9865 B4DRG7;E9PHA2;A8K4T8;Q15003;C9J470 B4DRG7 198 214 NCAPH Condensin complex subunit 2 yes no 3 0.0012214 29.81 1 0.55185 0.80349 NaN 1 Median NaN NaN NaN 0 0 Median 0.55185 0.80349 NaN 1 0 Median 19003000 11090000 7912200 0 0 0 19003000 11090000 7912200 2731 354 2987 4484 7243 7243 1 TIETSPSLSR ILMDSYGPKKVLDGKTIETSPSLSRMPNQH VLDGKTIETSPSLSRMPNQHACKLGANILL K T I S R M 0 1 0 0 0 0 1 0 0 1 1 0 0 0 1 3 2 0 0 0 0 0 10 0 1089.5666 H3BP78;F8W7R3;B3KNW8;B7ZMF2;Q9NVI1 H3BP78 230 239 FANCI Fanconi anemia group I protein yes no 2 0.00055376 83.397 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2732 436 2988 4485;4486 7244;7245;7246;7247;7248 7247 640 0 TIGGGDDSFNTFFSETGAGK ______________________________ DDSFNTFFSETGAGKHVPRAVFVDLEPTVI K T I G K H 1 0 1 2 0 0 1 5 0 1 0 1 0 3 0 2 3 0 0 0 0 0 20 0 2006.8858 B3KT06;B3KPS3;Q1ZYQ1;A8JZY9;Q13748;Q71U36;P68363;F8VQQ4;Q53GA7;F5H5D3;B7Z1K5;Q9BQE3;Q6PEY2;F8VVB9;F8VXZ7;F8VRK0;F8VX09;F8VWV9;F8VRZ4;F8VS66;B4DN58;F8W0F6;Q8N532 B3KT06 6 25 TUBA2;TUBA3C;TUBA1A;TUBA1B;TUBA1C;TUBA3E Tubulin alpha-3C/D chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-3E chain yes no 2 3.3011E-245 195.78 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2733 334 2989 4487;4488 7249;7250;7251 7250 508 0 TILEEEITPTIQK QKTIEKKEAKLKEIKTILEEEITPTIQKLK IKTILEEEITPTIQKLKEERSSYLEYQKVM K T I Q K L 0 0 0 0 0 1 3 0 0 3 1 1 0 0 1 0 3 0 0 0 0 0 13 0 1513.8239 B7ZLZ7;A0A024R158;O95347;A8K984;B3KMB1;Q2KQ72;Q05BV1;Q6IPS5;Q7Z2X1;A0JLM9;Q32Q15;Q5T821;Q05D74;Q6P712 B7ZLZ7 197 209 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 yes no 2 0.0030076 54.471 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2456000 2456000 0 0 0 0 2456000 2456000 0 2734 27 2990 4489 7252 7252 1 TIQAHEGFVR GEVRIWNLTQRNCIRTIQAHEGFVRGICTR RNCIRTIQAHEGFVRGICTRFCGTSFFTVG R T I V R G 1 1 0 0 0 1 1 1 1 1 0 0 0 1 0 0 1 0 0 1 0 0 10 0 1156.5989 A0A087WT20;Q9NV06;B3KME9 A0A087WT20 256 265 DCAF13 DDB1- and CUL4-associated factor 13 yes no 3 0.020813 26.786 1 0.6963 0.93245 NaN 1 Median NaN NaN NaN 0 0 Median 0.6963 0.93245 NaN 1 0 Median 9525800 5654600 3871200 0 0 0 9525800 5654600 3871200 2735 179 2991 4490 7253 7253 1 TISPAESTALLQGR SWITIPRKAGSLKQRTISPAESTALLQGRK RTISPAESTALLQGRKSREKHHNILPKTLA R T I G R K 2 1 0 0 0 1 1 1 0 1 2 0 0 0 1 2 2 0 0 0 0 0 14 0 1442.7729 Q03188;H0Y8J2 Q03188 331 344 CENPC Centromere protein C yes no 2 0 239.38 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2736 799 2992 4491;4492 7254;7255;7256;7257;7258;7259 7255 1311 0 TITLEVEPSDTIENVK ______________________________ ITLEVEPSDTIENVKAKIQDKEGIPPDQQR K T I V K A 0 0 1 1 0 0 3 0 0 2 1 1 0 0 1 1 3 0 0 2 0 0 16 0 1786.92 Q5RKT7;B2RDW1;P62979;J3QS39;J3QTR3;F5H6Q2;Q3MIH3;F5GYU3;F5H2Z3;F5H265;Q5UGI3;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5U5U6;Q5PY61;Q9UFQ0;Q96C32;Q96MH4;L8B4I8;L8B196;Q96H31;L8B4R0;A8K674;L8B4Z6;L8B4M0;L8B4J3;Q66K58;Q59EM9;P62987;P0CG47;P0CG48;J3QSA3;F5GZ39;M0R1V7;Q49A90 Q5RKT7 12 27 RPS27A;HEL112;UBB;UBC;UBA52;DKFZp434K0435;UbC Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin yes no 2 0.01949 28.903 1 0.70202 0.88223 NaN 1 Median NaN NaN NaN 0 0 Median 0.70202 0.88223 NaN 1 0 Median 51456000 29504000 21952000 0 0 0 51456000 29504000 21952000 2737 417 2993 4493 7260 7260 1 TITQIEEFSDVNEGEK VDSEDEKDPEWLREKTITQIEEFSDVNEGE ITQIEEFSDVNEGEKEVMKLWNLHVMKHGF K T I E K E 0 0 1 1 0 1 4 1 0 2 0 1 0 1 0 1 2 0 0 1 0 0 16 0 1837.8582 J3QQW9;A8K1U9;Q15022 J3QQW9 573 588 SUZ12 Polycomb protein SUZ12 yes no 2 0.00074967 55.261 1 1 1.0212 1.3095 17.899 2 Median 1.194 1.4862 NaN 1 0 Median 0.87346 1.1538 NaN 1 0 Median 18725000 9840400 8884900 5046400 2743700 2302600 13679000 7096700 6582300 2738 342 2994 4494;4495 7261;7262;7263 7261 3 TITVPVSGSPK VVLKEVPKAVVPVSKTITVPVSGSPKMSNI PVSKTITVPVSGSPKMSNIMQSIANSLPPH K T I P K M 0 0 0 0 0 0 0 1 0 1 0 1 0 0 2 2 2 0 0 2 0 0 11 0 1084.6128 B4E1Z2;E9PMC9;B3KWI5;Q7Z589 B4E1Z2 180 190 C11orf30;EMSY Protein EMSY yes no 2 0.0032272 60.019 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2739 451 2995 4496;4497 7264;7265;7266 7266 662;663 0 TIYSGEENMDITK KMYCNPDAMSSLTEKTIYSGEENMDITKSH EKTIYSGEENMDITKSHTVAIDNQIFKQDQ K T I T K S 0 0 1 1 0 0 2 1 0 2 0 1 1 0 0 1 2 0 1 0 0 0 13 0 1499.6814 E9PPJ1;Q8NG31 E9PPJ1 476 488 CASC5 Protein CASC5 yes no 2 6.9947E-09 78.244 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2740 627 2996 4498 7267 7267 133 1931 0 TKEEVNEWFTK SKRLRGEVGLLFTNRTKEEVNEWFTKYTEM FTNRTKEEVNEWFTKYTEMDYARAGNKAAF R T K T K Y 0 0 1 0 0 0 3 0 0 0 0 2 0 1 0 0 2 1 0 1 0 0 11 1 1409.6827 A0A024RAE1;Q9UKD2 A0A024RAE1 108 118 C1orf33;MRTO4 mRNA turnover protein 4 homolog yes no 2 4.7478E-29 146.16 1 0.45879 0.56842 NaN 1 Median NaN NaN NaN 0 0 Median 0.45879 0.56842 NaN 1 0 Median 19201000 13700000 5500300 0 0 0 19201000 13700000 5500300 2741 129 2997 4499 7268 7268 1 TKPTQAAGPSSPQKPPTPEETK GDEAPKLPQKQPQTKTKPTQAAGPSSPQKP GPSSPQKPPTPEETKAASPVLQEDIDIEGV K T K T K A 2 0 0 0 0 2 2 1 0 0 0 3 0 0 6 2 4 0 0 0 0 0 22 2 2276.1648 F5H8D7;B4DTD3;B2RCY5;A0A024R0S8;Q59HH7;P18887 F5H8D7 406 427 XRCC1 DNA repair protein XRCC1 yes no 3 4.2313E-73 138.9 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2742 21 2998;2999 4500;4501 7269;7270 7269 19;20;1774 0 TKSENGLEFTSSGSANTETTK FTKGYGFGLIKLDLKTKSENGLEFTSSGSA LEFTSSGSANTETTKVTGSLETKYRWTEYG K T K T K V 1 0 2 0 0 0 3 2 0 0 1 2 0 1 0 4 5 0 0 0 0 0 21 1 2188.0132 C9JI87;A0A1L1UHR1;P21796;B3KTS5 C9JI87 33 53 VDAC1 Voltage-dependent anion-selective channel protein 1 yes no 3 0.006636 22.996 1 0.50831 0.609 NaN 1 Median 0.50831 0.609 NaN 1 0 Median NaN NaN NaN 0 0 Median 3230600 1991000 1239600 3230600 1991000 1239600 0 0 0 2743 290 3000 4502 7271;7272 7272 2 TKYETELNLR LLQIDNARLAADDFRTKYETELNLRMSVEA ADDFRTKYETELNLRMSVEADINGLRRVLD R T K L R M 0 1 1 0 0 0 2 0 0 0 2 1 0 0 0 0 2 0 1 0 0 0 10 1 1265.6616 CON__P02533;P02533;CON__Q6IFX2 CON__P02533 202 211 KRT14 Keratin, type I cytoskeletal 14 yes no 2;3 5.1943E-11 106.2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 56767000 56767000 0 0 0 0 56767000 56767000 0 + 2744 571 3001 4503;4504 7273;7274 7273 2 TLAVSGLGVVGR STECTLILTEGDSAKTLAVSGLGVVGRDKY SAKTLAVSGLGVVGRDKYGVFPLRGKILNV K T L G R D 1 1 0 0 0 0 0 3 0 0 2 0 0 0 0 1 1 0 0 3 0 0 12 0 1127.6663 P11388 P11388 467 478 TOP2A DNA topoisomerase 2-alpha yes yes 2 0.010417 51.268 1 0.82068 1.0923 NaN 1 Median NaN NaN NaN 0 0 Median 0.82068 1.0923 NaN 1 0 Median 6779400 3433400 3346000 0 0 0 6779400 3433400 3346000 2745 734 3002 4505 7275;7276 7275 2 TLCGTPNYIAPEVLSK FGLATKVEYDGERKKTLCGTPNYIAPEVLS LCGTPNYIAPEVLSKKGHSFEVDVWSIGCI K T L S K K 1 0 1 0 1 0 1 1 0 1 2 1 0 0 2 1 2 0 1 1 0 0 16 0 1761.8971 B4E083;Q59GD0;B2R841;P53350 B4E083 113 128 PLK1 Serine/threonine-protein kinase PLK;Serine/threonine-protein kinase PLK1 yes no 2 0.0033703 49.595 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2746 407 3003 4506 7277 7277 1865 0 TLDSGTSEIVKSPR IVQHTTDSSLEEKQRTLDSGTSEIVKSPRI RTLDSGTSEIVKSPRIECSKTRREMQSVVQ R T L P R I 0 1 0 1 0 0 1 1 0 1 1 1 0 0 1 3 2 0 0 1 0 0 14 1 1488.7784 Q9H501;Q8IWH6;Q05C10;A0JLU5 Q9H501 187 200 ESF1 ESF1 homolog yes no 2;3 0 239.86 1 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2747 926 3004 4507;4508;4509 7278;7279;7280 7278 1614 0 TLEEDVDDRAPSK GLSEKIFAKPEEQRKTLEEDVDDRAPSKKG RKTLEEDVDDRAPSKKGKKRKAQREEEQEH K T L S K K 1 1 0 3 0 0 2 0 0 0 1 1 0 0 1 1 1 0 0 1 0 0 13 1 1473.6947 Q5T0F3;Q13823 Q5T0F3 642 654 GNL2 Nucleolar GTP-binding protein 2 yes no 3 0.022847 24.964 1 0.41691 0.54576 NaN 1 Median NaN NaN NaN 0 0 Median 0.41691 0.54576 NaN 1 0 Median 7513200 5084900 2428300 0 0 0 7513200 5084900 2428300 2748 809 3005 4510 7281 7281 1 TLEFNRR SKNKCHKARRCHMNRTLEFNRRQKKNIWLE ARRCHMNRTLEFNRRQKKNIWLETHIWHAK R T L R R Q 0 2 1 0 0 0 1 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 7 1 934.49846 Q96F88;Q99575 Q96F88 189 195 POP1 Ribonucleases P/MRP protein subunit POP1 yes no 3 0.00076656 60.788 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3144900 3144900 0 0 0 0 3144900 3144900 0 2749 901 3006 4511 7282 7282 1 TLEGELHDLR NSKEAALSTALSEKRTLEGELHDLRGQVAK LSEKRTLEGELHDLRGQVAKLEAALGEAKK R T L L R G 0 1 0 1 0 0 2 1 1 0 3 0 0 0 0 0 1 0 0 0 0 0 10 0 1181.6041 P02545;W8QEH3;Q5I6Y5;Q8N519;Q3BDU5;Q5TCI8;H0YAB0 P02545 157 166 LMNA Prelamin-A/C;Lamin-A/C yes no 2;3 0.0017286 49.418 2 1.573 2.0586 5.7125 2 Median NaN NaN NaN 0 0 Median 1.573 2.0586 5.7125 2 0 Median 22808000 8945200 13862000 0 0 0 22808000 8945200 13862000 2750 725 3007 4512;4513 7283;7284 7283 2 TLGDFAAEYAK VTGKGQDGIGSKAEKTLGDFAAEYAKSNRS KAEKTLGDFAAEYAKSNRSTCKGCMEKIEK K T L A K S 3 0 0 1 0 0 1 1 0 0 1 1 0 1 0 0 1 0 1 0 0 0 11 0 1184.5714 A0A024R3T8;P09874;B2R5W3;B4E0E1;Q05D33;Q6PJL0 A0A024R3T8 109 119 PARP1 Poly [ADP-ribose] polymerase 1 yes no 2 0.024707 42.718 1 0.34112 0.45103 NaN 1 Median NaN NaN NaN 0 0 Median 0.34112 0.45103 NaN 1 0 Median 4270700 3030900 1239700 0 0 0 4270700 3030900 1239700 2751 56 3008 4514 7285 7285 1 TLHCEGTEINSDDEQESK LMTFGIEPFKTKKIKTLHCEGTEINSDDEQ CEGTEINSDDEQESKEVEETATAKNVLKLL K T L S K E 0 0 1 2 1 1 4 1 1 1 1 1 0 0 0 2 2 0 0 0 0 0 18 0 2090.8699 Q6NUR1;Q9BPX3;H0Y9Z8 Q6NUR1 664 681 NCAPG Condensin complex subunit 3 yes no 2;3 0 225.29 1 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2752 857 3009 4515;4516;4517 7286;7287;7288;7289;7290;7291;7292;7293;7294;7295;7296 7292 1419 0 TLHCEGTEINSDDEQESKEVEETATAK LMTFGIEPFKTKKIKTLHCEGTEINSDDEQ DEQESKEVEETATAKNVLKLLSDFLDSEVS K T L A K N 2 0 1 2 1 1 7 1 1 1 1 2 0 0 0 2 4 0 0 1 0 0 27 1 3049.3306 Q6NUR1;Q9BPX3;H0Y9Z8 Q6NUR1 664 690 NCAPG Condensin complex subunit 3 yes no 3;4 3.4234E-204 184.44 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2753 857 3010 4518;4519 7297;7298;7299 7298 1419 0 TLHEVSLQESIR AENKTTTTARLASARTLHEVSLQESIRYAP SARTLHEVSLQESIRYAPGDAVEKWLNDLL R T L I R Y 0 1 0 0 0 1 2 0 1 1 2 0 0 0 0 2 1 0 0 1 0 0 12 0 1410.7467 Q05CW7 Q05CW7 459 470 NAT10 yes yes 2;3 0.001821 48.284 2 0.63362 0.8639 3.2045 2 Median NaN NaN NaN 0 0 Median 0.63362 0.8639 3.2045 2 0 Median 78823000 47019000 31804000 0 0 0 78823000 47019000 31804000 2754 801 3011 4520;4521 7300;7301;7302 7300 3 TLLEGEESR MNTKLALDLEIATYRTLLEGEESRMSGECA EIATYRTLLEGEESRMSGECAPNVSVSVST R T L S R M 0 1 0 0 0 0 3 1 0 0 2 0 0 0 0 1 1 0 0 0 0 0 9 0 1032.5088 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;H6VRG2;H6VRF9;CON__P04264 H6VRG3 484 492 KRT1 Keratin, type II cytoskeletal 1 no no 2 3.1983E-05 75.378 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 6534500 6534500 0 0 0 0 6534500 6534500 0 + 2755 670 3012 4522 7303 7303 1 TLLNAQPPVGAAYQDSPGEQK ILAEAVMEGRPTPDKTLLNAQPPVGAAYQD PPVGAAYQDSPGEQKGIKTTSSVWRDKEMD K T L Q K G 3 0 1 1 0 3 1 2 0 0 2 1 0 0 3 1 1 0 1 1 0 0 21 0 2183.0859 B1AMJ5;Q6MZT4;Q7Z3M0;A0A0A0MRG9;Q5CZA0;B7ZLE9;A6H8X1;B9EG74;Q66GT8;B3KVI2;A0A0C4ZLW1;Q96SN8 B1AMJ5 399 419 CDK5RAP2;DKFZp686E2242;DKFZp686M1993;DKFZp686D1070 CDK5 regulatory subunit-associated protein 2 yes no 2 3.0298E-09 47.189 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2756 213 3013 4523 7304;7305 7305 291 0 TLLTGDGGGEATGSPLAQGK QELNNRLAAEITRLRTLLTGDGGGEATGSP DGGGEATGSPLAQGKDAYELEVLLRVKESE R T L G K D 2 0 0 1 0 1 1 6 0 0 3 1 0 0 1 1 3 0 0 0 0 0 20 0 1828.9167 B9EGI2;Q6WCQ1;U6FSN9;J3KSW8;H0Y7E2;Q9Y6X7;H0Y2S9;Q5ZEZ6 B9EGI2 877 896 MPRIP;Mprip-Ntrk1 fusion gene;KIAA0864;M-RIP Myosin phosphatase Rho-interacting protein;Tyrosine-protein kinase receptor yes no 2 1.4702E-88 147.1 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2757 553 3014 4524;4525 7306;7307;7308 7307 817 0 TLNDMRQEYEQLIAK VNVEINVAPGKDLTKTLNDMRQEYEQLIAK TLNDMRQEYEQLIAKNRKDIENQYETQITQ K T L A K N 1 1 1 1 0 2 2 0 0 1 2 1 1 0 0 0 1 0 1 0 0 0 15 1 1850.9196 CON__P35527;P35527;K7EQQ3 CON__P35527 322 336 KRT9 Keratin, type I cytoskeletal 9 yes no 3 2.2772E-06 65.472 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 10170000 10170000 0 0 0 0 10170000 10170000 0 + 2758 582 3015 4526 7309 7309 119 1 TLPHGAGHLAFSQR KIFDLRGTYQPLSTRTLPHGAGHLAFSQRG RTLPHGAGHLAFSQRGLLVAGMGDVVNIWA R T L Q R G 2 1 0 0 0 1 0 2 2 0 2 0 0 1 1 1 1 0 0 0 0 0 14 0 1490.7742 B4DP15;B4DNI0;B0UZZ8;A8K806;O15213 B4DP15 345 358 C6orf11;WDR46 WD repeat-containing protein 46 yes no 3 0.002086 37.092 1 0.83784 1.1141 NaN 1 Median NaN NaN NaN 0 0 Median 0.83784 1.1141 NaN 1 0 Median 6679300 3375600 3303800 0 0 0 6679300 3375600 3303800 2759 372 3016 4527 7310 7310 1 TLQLDEDVLCVSYSPNQK DENSTQKRLSVKQTRTLQLDEDVLCVSYSP LDEDVLCVSYSPNQKLLAVSLLDCTVKIFY R T L Q K L 0 0 1 2 1 2 1 0 0 0 3 1 0 0 1 2 1 0 1 2 0 0 18 0 2108.0096 Q5TDG3;Q9UNX4;Q59GA8;B3KMW5 Q5TDG3 545 562 WDR3 WD repeat-containing protein 3 yes no 2 0.0066219 35.006 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 5215800 5215800 0 5215800 5215800 0 0 0 0 2760 848 3017 4528 7311 7311 1 TLSDDLDEAAK QMVAAKDVVMEPTMKTLSDDLDEAAKEFQE PTMKTLSDDLDEAAKEFQEKHKKEVGKLKS K T L A K E 2 0 0 3 0 0 1 0 0 0 2 1 0 0 0 1 1 0 0 0 0 0 11 0 1176.551 Q9H0A0;A0A087WV29 Q9H0A0 932 942 NAT10 N-acetyltransferase 10 yes no 2 0.00023113 74.46 1 2 0.58109 0.74673 NaN 1 Median NaN NaN NaN 0 0 Median 0.58109 0.74673 NaN 1 0 Median 7195200 3745700 3449500 0 0 0 7195200 3745700 3449500 2761 924 3018;3019 4529;4530;4531 7312;7313;7314;7315;7316 7313 1607 1 TLSDESIYNSQR SPFPSTPTSRRALHRTLSDESIYNSQREHF LHRTLSDESIYNSQREHFFTSRASLLDQAL R T L Q R E 0 1 1 1 0 1 1 0 0 1 1 0 0 0 0 3 1 0 1 0 0 0 12 0 1411.6579 Q5CZ77;F5GYF8;B4DYX7;A6H8W6;O43166 Q5CZ77 134 145 DKFZp686G1344;SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 yes no 2 8.7055E-05 72.089 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2762 323 3020 4532 7317;7318 7317 494 0 TLSPTPASATAPTSQGIPTSDEESTPKK EQHVTQLMSTEPLPRTLSPTPASATAPTSQ SQGIPTSDEESTPKKSKARILESITVSSLM R T L K K S 3 0 0 1 0 1 2 1 0 1 1 2 0 0 5 5 6 0 0 0 0 0 28 1 2798.3822 Q9NQS7;B3KPD3 Q9NQS7 195 222 INCENP Inner centromere protein yes no 3 2.6985E-243 194.79 3 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2763 932 3021;3022;3023 4533;4534;4535;4536 7319;7320;7321;7322;7323;7324;7325 7319 1640;1641;1642;2044;2045 0 TLTDEVNSPDSDR DDKNPVSRRKKISAKTLTDEVNSPDSDRRD AKTLTDEVNSPDSDRRDKKGGNYKKRKRSP K T L D R R 0 1 1 3 0 0 1 0 0 0 1 0 0 0 1 2 2 0 0 1 0 0 13 0 1447.6427 B4DF22;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2 B4DF22 165 177 SMARCC2 SWI/SNF complex subunit SMARCC2 yes no 2 0.00020259 67.326 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2764 137 3024 4537 7326 7326 199 0 TLTDEVNSPDSDRR DDKNPVSRRKKISAKTLTDEVNSPDSDRRD KTLTDEVNSPDSDRRDKKGGNYKKRKRSPS K T L R R D 0 2 1 3 0 0 1 0 0 0 1 0 0 0 1 2 2 0 0 1 0 0 14 1 1603.7438 B4DF22;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2 B4DF22 165 178 SMARCC2 SWI/SNF complex subunit SMARCC2 yes no 2 0.0014851 43.69 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2765 137 3025 4538 7327 7327 199 0 TLTDEVNSPDSDRRDK DDKNPVSRRKKISAKTLTDEVNSPDSDRRD LTDEVNSPDSDRRDKKGGNYKKRKRSPSPS K T L D K K 0 2 1 4 0 0 1 0 0 0 1 1 0 0 1 2 2 0 0 1 0 0 16 2 1846.8657 B4DF22;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2 B4DF22 165 180 SMARCC2 SWI/SNF complex subunit SMARCC2 yes no 3 0.00024585 43.955 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2766 137 3026 4539 7328 7328 199 0 TLTPISGGQR TRIAASKTIDIREERTLTPISGGQRSSVVP IREERTLTPISGGQRSSVVPSVILKPENIK R T L Q R S 0 1 0 0 0 1 0 2 0 1 1 0 0 0 1 1 2 0 0 0 0 0 10 0 1028.5615 B7Z8H0;Q96F82;A8K794;Q13415 B7Z8H0 335 344 ORC1L;ORC1 Origin recognition complex subunit 1 yes no 2 0.015516 40.352 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2767 367 3027 4540 7329 7329 1858 0 TLYGFGG VTAMDVVYALKRQGRTLYGFGG________ YALKRQGRTLYGFGG_______________ R T L G G - 0 0 0 0 0 0 0 3 0 0 1 0 0 1 0 0 1 0 1 0 0 0 7 0 713.33844 B2R4R0;P62805;Q0VAS5 B2R4R0 97 103 HIST1H4H;HIST1H4A Histone H4 yes no 1 2.9067E-18 113.82 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 19968000 0 0 19968000 0 0 0 0 0 2768 400 3028 4541 7330 7330 1 TNKSPEAKPLPGK KRAAKRRLGSVEAPKTNKSPEAKPLPGKLP PKTNKSPEAKPLPGKLPKGISAGAVQTAGK K T N G K L 1 0 1 0 0 0 1 1 0 0 1 3 0 0 3 1 1 0 0 0 0 0 13 2 1365.7616 P46087;F5H5X6;F5GWB7;F5H709;F5H359 P46087 64 76 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes no 3 0.0011185 56.215 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2769 763 3029 4542;4543 7331;7332 7332 1233 0 TNPEVMVVESDLSDDGK TEDFAGFTQSDLNGKTNPEVMVVESDLSDD PEVMVVESDLSDDGKASLVSEEEEDEEEDK K T N G K A 0 0 1 3 0 0 2 1 0 0 1 1 1 0 1 2 1 0 0 3 0 0 17 0 1833.8302 C9JFL7;C9J8L0;C9IZR6;A8K8X5;A0A024RA51;Q96GN5 C9JFL7 62 78 CDCA7L Cell division cycle-associated 7-like protein yes no 2 2.8383E-19 86.453 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2770 126 3030 4544;4545;4546 7333;7334;7335 7335 25 179 0 TNREIIHYIRSK WNYVINLCGQDFPIKTNREIIHYIRSKWSD PIKTNREIIHYIRSKWSDKNITPGVIQPLH K T N S K W 0 2 1 0 0 0 1 0 1 3 0 1 0 0 0 1 1 0 1 0 0 0 12 2 1528.8474 A0A087WZE6;F2Z6J8;Q6ZNI0 A0A087WZE6 212 223 GCNT7;gcnt Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 7 yes no 2 0.0026686 50.562 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2771 199 3031 4547 7336 7336 282;2066 0 TNRPPLSLSR ______________________________ ______________________________ R T N S R M 0 2 1 0 0 0 0 0 0 0 2 0 0 0 2 2 1 0 0 0 0 0 10 1 1139.6411 F8VUA6;Q0QEW2;G3V203;H0YHA7;A0A024QZD1;J3QQ67;Q07020;F8VYV2;B4DDY5;A0A075B7A0 F8VUA6 4 13 RPL18 60S ribosomal protein L18 yes no 2;3 1.829E-20 110.64 2 0.67485 1.1773 0.040139 2 Median NaN NaN NaN 0 0 Median 0.67485 1.1773 0.040139 2 0 Median 132600000 78623000 53974000 0 0 0 132600000 78623000 53974000 2772 4 3032 4548;4549 7337;7338;7339 7337 3 TNYNDRYDEIR SEDKGALAKLVEAIRTNYNDRYDEIRRHWG EAIRTNYNDRYDEIRRHWGGNVLGPKSVAR R T N I R R 0 2 2 2 0 0 1 0 0 1 0 0 0 0 0 0 1 0 2 0 0 0 11 1 1457.6535 P62424;Q9BY74;Q5T8U2 P62424 224 234 RPL7A;RP-L7a 60S ribosomal protein L7a yes no 2;3 0.0060426 58.223 1 2 0.67579 1.0199 12.325 3 Median 0.72142 0.90907 NaN 1 0 Median 0.62134 1.0891 9.282 2 0 Median 159170000 100750000 58415000 4160700 2813700 1347000 155010000 97940000 57068000 2773 789 3033 4550;4551;4552 7340;7341;7342;7343 7342 3 TNYNDRYDEIRR SEDKGALAKLVEAIRTNYNDRYDEIRRHWG AIRTNYNDRYDEIRRHWGGNVLGPKSVARI R T N R R H 0 3 2 2 0 0 1 0 0 1 0 0 0 0 0 0 1 0 2 0 0 0 12 2 1613.7546 P62424;Q9BY74;Q5T8U2 P62424 224 235 RPL7A;RP-L7a 60S ribosomal protein L7a yes no 3;4 9.2018E-05 85.845 2 0.67371 0.87642 0.042612 2 Median 0.67371 0.87642 0.042612 2 0 Median NaN NaN NaN 0 0 Median 132750000 78787000 53961000 132750000 78787000 53961000 0 0 0 2774 789 3034 4553;4554 7344;7345;7346;7347;7348;7349;7350;7351 7347 8 TPAAAAAMNLASPR RTPAIPTAVNLADSRTPAAAAAMNLASPRT RTPAAAAAMNLASPRTAVAPSAVNLADPRT R T P P R T 6 1 1 0 0 0 0 0 0 0 1 0 1 0 2 1 1 0 0 0 0 0 14 0 1340.6871 A0A140VK53;Q9UQ35;O60382;A0AUK8 A0A140VK53 2261 2274 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 yes no 2 9.2839E-69 144.73 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2775 284 3035 4555 7352;7353 7353 60 423 0 TPAEVVSTCDITFACVSDPK EKCDLFIQEGARLGRTPAEVVSTCDITFAC VSTCDITFACVSDPKAAKDLVLGPSGVLQG R T P P K A 2 0 0 2 2 0 1 0 0 1 0 1 0 1 2 2 3 0 0 3 0 0 20 0 2196.0079 K7EMM8;D3DUE6;D3DUE7;Q49A26;K7EK70 K7EMM8 287 306 GLYR1;N-PAC Putative oxidoreductase GLYR1 yes no 2 4.2193E-16 85.734 1 1 0.64637 0.80616 30.777 2 Median 0.80044 1.0022 NaN 1 0 Median 0.52195 0.6485 NaN 1 0 Median 45909000 28382000 17527000 16169000 8807700 7361000 29741000 19575000 10166000 2776 592 3036 4556;4557 7354;7355;7356;7357 7356 4 TPAFSPFVR LKYISSCKRLRSDSRTPAFSPFVRVEKRDA LRSDSRTPAFSPFVRVEKRDAFTTICTVVN R T P V R V 1 1 0 0 0 0 0 0 0 0 0 0 0 2 2 1 1 0 0 1 0 0 9 0 1020.5393 Q7Z5J4 Q7Z5J4 1592 1600 RAI1 Retinoic acid-induced protein 1 yes yes 2 0.024654 55.401 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2777 870 3037 4558 7358 7358 1455 0 TPEELDDSDFETEDFDVR YDGIRDIRKAVLMIRTPEELDDSDFETEDF ELDDSDFETEDFDVRSRTSVQTEDDQLIAG R T P V R S 0 1 0 5 0 0 4 0 0 0 1 0 0 2 1 1 2 0 0 1 0 0 18 0 2157.8862 B4DKT9;B4DU00;G3XAM7;B4E2G8;P35221 B4DKT9 511 528 CTNNA1 Catenin alpha-1 yes no 2 1.218E-10 81.431 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2778 473 3038 4559 7359 7359 678 0 TPEQYYQTFSPSSSHSPAR GQQGQGYCQPDAAVRTPEQYYQTFSPSSSH YYQTFSPSSSHSPARSVGRSPSYSSTPSPL R T P A R S 1 1 0 0 0 2 1 0 1 0 0 0 0 1 3 5 2 0 2 0 0 0 19 0 2168.9763 Q7Z5J4;A8MXE8 Q7Z5J4 330 348 RAI1 Retinoic acid-induced protein 1 yes no 2;3 8.7378E-07 58.904 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2779 870 3039 4560;4561;4562 7360;7361;7362 7361 1456;1457;1458;1459;2016 0 TPESKPTILVK NMGWADAMAKVLNKKTPESKPTILVKNKKP LNKKTPESKPTILVKNKKPKKKKKKKKKK_ K T P V K N 0 0 0 0 0 0 1 0 0 1 1 2 0 0 2 1 2 0 0 1 0 0 11 1 1211.7125 A0JLN3;Q9Y3B9;A8K201 A0JLN3 104 114 RRP15 RRP15-like protein yes no 2 1.8695E-05 96.745 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2780 292 3040 4563;4564 7363;7364;7365 7363 1831 0 TPFNTDLGENSGIGK KLVETDFSTPTPRRKTPFNTDLGENSGIGK TPFNTDLGENSGIGKLFTNAVESLDEEEKD K T P G K L 0 0 2 1 0 0 1 3 0 1 1 1 0 1 1 1 2 0 0 0 0 0 15 0 1548.742 Q6P0N0 Q6P0N0 1094 1108 MIS18BP1 Mis18-binding protein 1 yes yes 2 1.5483E-18 108.34 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2781 858 3041 4565;4566 7366;7367;7368;7369 7367 1425 0 TPGLRTPAAGER PTPGLTPRFDSRVFKTPGLRTPAAGERIYN VFKTPGLRTPAAGERIYNISGNGSPLADSK K T P E R I 2 2 0 0 0 0 1 2 0 0 1 0 0 0 2 0 2 0 0 0 0 0 12 1 1224.6575 Q53HL2;A8K7A2;B4DXT3 Q53HL2 199 210 CDCA8 Borealin yes no 3 0.018955 44.294 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2782 837 3042 4567;4568 7370;7371;7372 7372 2003 0 TPHVQAVQGPLGSPPK QRVRRPVAMVMPARRTPHVQAVQGPLGSPP PHVQAVQGPLGSPPKRGPLPTEEQRVYRRK R T P P K R 1 0 0 0 0 2 0 2 1 0 1 1 0 0 4 1 1 0 0 2 0 0 16 0 1611.8733 Q15149 Q15149 113 128 PLEC Plectin yes yes 2 0.00042337 45.084 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2783 822 3043 4569 7373 7373 1357 0 TPLALAGSPTPK AKGLGHPPSSPLLKKTPLALAGSPTPKNPE LKKTPLALAGSPTPKNPEDKSPQLSLSPRP K T P P K N 2 0 0 0 0 0 0 1 0 0 2 1 0 0 3 1 2 0 0 0 0 0 12 0 1151.655 B9EGQ5;M0QXA7;O95785 B9EGQ5 170 181 WIZ Protein Wiz yes no 2 4.6433E-21 117.93 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2784 554 3044 4570 7374;7375 7375 821 0 TPPAPSPFDLPELK ILKEMCDVEQVLSKKTPPAPSPFDLPELKH KTPPAPSPFDLPELKHVATEYQENKAPGKK K T P L K H 1 0 0 1 0 0 1 0 0 0 2 1 0 1 5 1 1 0 0 0 0 0 14 0 1507.7922 Q59HG1;O95239;B3KNC0 Q59HG1 1184 1197 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A yes no 2 0.00068111 75.669 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2785 717 3045 4571 7376;7377 7377 1086;1950 0 TPPLITDYR YKEQVLEPMLNGTEKTPPLITDYREYHTDT LNGTEKTPPLITDYREYHTDTTVKFVVKMT K T P Y R E 0 1 0 1 0 0 0 0 0 1 1 0 0 0 2 0 2 0 1 0 0 0 9 0 1074.571 P11388 P11388 950 958 TOP2A DNA topoisomerase 2-alpha yes yes 2 0.0085742 57.96 1 0.74831 0.96178 NaN 1 Median NaN NaN NaN 0 0 Median 0.74831 0.96178 NaN 1 0 Median 15275000 8790900 6484300 0 0 0 15275000 8790900 6484300 2786 734 3046 4572 7378 7378 1 TPPLITDYREYHTDTTVK YKEQVLEPMLNGTEKTPPLITDYREYHTDT LITDYREYHTDTTVKFVVKMTEEKLAEAER K T P V K F 0 1 0 2 0 0 1 0 1 1 1 1 0 0 2 0 5 0 2 1 0 0 18 1 2149.0691 P11388 P11388 950 967 TOP2A DNA topoisomerase 2-alpha yes yes 3;4 0.00028 32.181 2 0.69045 0.94797 0.91914 2 Median NaN NaN NaN 0 0 Median 0.69045 0.94797 0.91914 2 0 Median 25362000 14672000 10690000 0 0 0 25362000 14672000 10690000 2787 734 3047 4573;4574 7379;7380;7381;7382 7380 4 TPQEAIMDGTEIAVSPR NASKTWELSLYELHRTPQEAIMDGTEIAVS QEAIMDGTEIAVSPRSLHSELMCPICLDML R T P P R S 2 1 0 1 0 1 2 1 0 2 0 0 1 0 2 1 2 0 0 1 0 0 17 0 1813.888 B4DVB5;Q06587 B4DVB5 24 40 RING1 E3 ubiquitin-protein ligase RING1 yes no 2 2.1555E-08 68.168 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2788 503 3048 4575 7383 7383 96 744 0 TPQEAITDGLEIVVSPR PLSKTWELSLYELQRTPQEAITDGLEIVVS QEAITDGLEIVVSPRSLHSELMCPICLDML R T P P R S 1 1 0 1 0 1 2 1 0 2 1 0 0 0 2 1 2 0 0 2 0 0 17 0 1823.9629 X6RFN3;Q99496 X6RFN3 27 43 RNF2 E3 ubiquitin-protein ligase RING2 yes no 2 7.8977E-61 140.32 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2789 912 3049 4576 7384 7384 1572 0 TPSKPPAQLSPSVPK PKGKRKLDLNQEEKKTPSKPPAQLSPSVPK TPSKPPAQLSPSVPKRPKLPAPTRTPATAP K T P P K R 1 0 0 0 0 1 0 0 0 0 1 2 0 0 5 3 1 0 0 1 0 0 15 1 1532.8562 F5H8D7;B4DTD3;B2RCY5;A0A024R0S8;Q59HH7;P18887;M0QYS5;B4DEB2 F5H8D7 226 240 XRCC1 DNA repair protein XRCC1 yes no 3 0.00026563 48.112 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2790 21 3050 4577 7385 7385 18 0 TPSPPPPIPEDIALGK QRNSKTNQSKKKGPRTPSPPPPIPEDIALG PSPPPPIPEDIALGKKKKKK__________ R T P G K K 1 0 0 1 0 0 1 1 0 2 1 1 0 0 6 1 1 0 0 0 0 0 16 0 1627.8821 Q6PJ96;A0PJJ2;Q5T200 Q6PJ96 263 278 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes no 2 1.043E-05 66.387 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2791 300 3051 4578 7386 7386 448 0 TPSSPLQSCTPSLSPR SAPATLTPRSPHASRTPSSPLQSCTPSLSP PSSPLQSCTPSLSPRSHVPSPHQALVTRPQ R T P P R S 0 1 0 0 1 1 0 0 0 0 2 0 0 0 4 5 2 0 0 0 0 0 16 0 1713.8356 R4GNJ5;A0A0C4DGT6;Q96AP0 R4GNJ5 333 348 ACD Adrenocortical dysplasia protein homolog yes no 2 1.1801E-06 79.805 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2792 246 3052 4579;4580 7387;7388 7387 343;344;345 0 TPTCQSSTDCSPYAR QPPGKKPFLRNLLPRTPTCQSSTDCSPYAR TPTCQSSTDCSPYARILRSRRSPLLKSGPF R T P A R I 1 1 0 1 2 1 0 0 0 0 0 0 0 0 2 3 3 0 1 0 0 0 15 0 1729.7036 O95235 O95235 857 871 KIF20A Kinesin-like protein KIF20A yes yes 2 2.4974E-19 113.11 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2793 716 3053 4581;4582 7389;7390;7391;7392 7392 1080 0 TPTGEGLLDSPSK LCKNPCAMFAAGEIKTPTGEGLLDSPSKTM IKTPTGEGLLDSPSKTMSIKERLALLKKSG K T P S K T 0 0 0 1 0 0 1 2 0 0 2 1 0 0 2 2 2 0 0 0 0 0 13 0 1300.6511 O95425;A0A0J9YWY6;Q659E9;B4E3H1 O95425 1111 1123 SVIL;DKFZp586H1823 Supervillin no no 2 1.0455E-164 172.91 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2794 719;523 3054 4583;4584 7393;7394 7393 759 0 TPTSSPASSPLVAK VAFDPEQKPLHGVLKTPTSSPASSPLVAKK KTPTSSPASSPLVAKKPLTTTPRRRPRAMD K T P A K K 2 0 0 0 0 0 0 0 0 0 1 1 0 0 3 4 2 0 0 1 0 0 14 0 1341.714 Q14684 Q14684 728 741 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 2 2.3979E-192 188.92 3 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2795 815 3055;3056 4585;4586;4587;4588;4589;4590 7395;7396;7397;7398;7399;7400;7401;7402;7403;7404;7405;7406;7407;7408 7408 1340;1341;1342;1343 0 TPTTTPPETQQSPHLSLK KYTDEKETEGSKPTKTPTTTPPETQQSPHL TTPPETQQSPHLSLKDITNVSLYPVVKIRR K T P L K D 0 0 0 0 0 2 1 0 1 0 2 1 0 0 4 2 5 0 0 0 0 0 18 0 1962.0058 B5BUA4;Q5FBB7 B5BUA4 425 442 SGOL1 Shugoshin-like 1 yes no 2;3 6.9703E-25 113.24 3 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2796 529 3057;3058 4591;4592;4593;4594;4595 7409;7410;7411;7412;7413;7414;7415 7414 769;1895;1896 0 TPVDESDDEIQHDEIPTGK FEQRLMNEIEFRLERTPVDESDDEIQHDEI ESDDEIQHDEIPTGKCIAPIFDKRLKHFRV R T P G K C 0 0 0 4 0 1 3 1 1 2 0 1 0 0 2 1 2 0 0 1 0 0 19 0 2123.9495 A0A087WX60;Q86TC9 A0A087WX60 629 647 MYPN Myopalladin yes no 2 2.7753E-05 41.996 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2797 194 3059 4596 7416 7416 279 0 TPVEPEVAIHR ______________________________ DTGKTPVEPEVAIHRIRITLTSRNVKSLEK K T P H R I 1 1 0 0 0 0 2 0 1 1 0 0 0 0 2 0 1 0 0 2 0 0 11 0 1246.667 E5RIP1;E5RJX2;P60866 E5RIP1 9 19 RPS20 40S ribosomal protein S20 yes no 3 7.9465E-05 69.451 1 1.0884 1.4062 NaN 1 Median NaN NaN NaN 0 0 Median 1.0884 1.4062 NaN 1 0 Median 20596000 10009000 10587000 0 0 0 20596000 10009000 10587000 2798 604 3060 4597 7417 7417 1 TPVQYSQQQNSPQK AVGASFPLYEPAKMKTPVQYSQQQNSPQKH KTPVQYSQQQNSPQKHKNKDLYTTGRRESV K T P Q K H 0 0 1 0 0 5 0 0 0 0 0 1 0 0 2 2 1 0 1 1 0 0 14 0 1631.7903 P46013 P46013 347 360 MKI67 Antigen KI-67 yes yes 2 1.7767E-10 102.65 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2799 762 3061 4598 7418;7419;7420;7421 7420 1227 0 TQASSSFQDSSQPAGK KGADSELSTVPSVTKTQASSSFQDSSQPAG QASSSFQDSSQPAGKAEGIREPKVTGKLKQ K T Q G K A 2 0 0 1 0 3 0 1 0 0 0 1 0 1 1 5 1 0 0 0 0 0 16 0 1624.7329 P46087 P46087 670 685 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 2 2.5719E-06 78.486 1 0.56411 0.73963 NaN 1 Median NaN NaN NaN 0 0 Median 0.56411 0.73963 NaN 1 0 Median 6525600 4222100 2303500 0 0 0 6525600 4222100 2303500 2800 763 3062 4599 7422;7423 7422 2 TQGQDSLEAQLSSLESSR NEPKMDNCHSVSRVKTQGQDSLEAQLSSLE QDSLEAQLSSLESSRRVHTSTPSDKNLLDT K T Q S R R 1 1 0 1 0 3 2 1 0 0 3 0 0 0 0 5 1 0 0 0 0 0 18 0 1934.9181 Q03164 Q03164 2791 2808 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes yes 2 9.8037E-08 64.394 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2801 798 3063 4600 7424 7424 1301 0 TQIVTEIISEIR LVERLLHIIIDDNKRTQIVTEIISEIRAPI NKRTQIVTEIISEIRAPIVTVGVNNDPADV R T Q I R A 0 1 0 0 0 1 2 0 0 4 0 0 0 0 0 1 2 0 0 1 0 0 12 0 1400.7875 Q6NUR1;Q9BPX3;H0Y9Z8 Q6NUR1 459 470 NCAPG Condensin complex subunit 3 yes no 2 0.029393 37.995 1 0.5022 0.65254 NaN 1 Median NaN NaN NaN 0 0 Median 0.5022 0.65254 NaN 1 0 Median 13481000 8798900 4681700 0 0 0 13481000 8798900 4681700 2802 857 3064 4601 7425 7425 1 TQLYEYLQNR ILHLCTQVIEISEYRTQLYEYLQNRMMAIA ISEYRTQLYEYLQNRMMAIAPNVTVMVGEL R T Q N R M 0 1 1 0 0 2 1 0 0 0 2 0 0 0 0 0 1 0 2 0 0 0 10 0 1326.6568 Q9Y2X3;B3KN82;H7BZ72 Q9Y2X3 269 278 NOP58 Nucleolar protein 58 yes no 2 0.0040885 66.435 1 1 0.5096 0.66229 27.302 2 Median 0.6352 0.80333 NaN 1 0 Median 0.40883 0.54602 NaN 1 0 Median 14851000 10127000 4723800 4583300 2526400 2056900 10268000 7600900 2666900 2803 964 3065 4602;4603 7426;7427;7428 7427 3 TQMAEVLPSPR QVGLPGKGGKAKGKKTQMAEVLPSPRGQRV KGKKTQMAEVLPSPRGQRVIPRITIEMKAE K T Q P R G 1 1 0 0 0 1 1 0 0 0 1 0 1 0 2 1 1 0 0 1 0 0 11 0 1227.6282 P11388 P11388 1205 1215 TOP2A DNA topoisomerase 2-alpha yes yes 2 3.7172E-242 209.21 4 9 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2804 734 3066;3067 4604;4605;4606;4607;4608;4609;4610;4611;4612;4613;4614;4615;4616 7429;7430;7431;7432;7433;7434;7435;7436;7437;7438;7439;7440;7441;7442;7443;7444;7445;7446;7447;7448;7449;7450;7451;7452;7453;7454;7455;7456;7457;7458;7459;7460 7440 163 1143 0 TQPDGTSVPGEPASPISQR CEEGTPLSITSKLPRTQPDGTSVPGEPASP GTSVPGEPASPISQRLPPKVESLESLYFTP R T Q Q R L 1 1 0 1 0 2 1 2 0 1 0 0 0 0 4 3 2 0 0 1 0 0 19 0 1922.9334 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q59HB8;Q96HN5;H0YFY6;Q7Z757 A0A087WY61 1728 1746 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 yes no 2 5.2733E-24 108.64 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2805 71 3068;3069 4617;4618;4619;4620 7461;7462;7463;7464;7465;7466;7467;7468;7469 7468 94;95 0 TQSRPGGPPNPPGPSPK NGSPIDTLREILKRRTQSRPGGPPNPPGPS SRPGGPPNPPGPSPKALAKMMGGAGPGSSL R T Q P K A 0 1 1 0 0 1 0 3 0 0 0 1 0 0 7 2 1 0 0 0 0 0 17 1 1669.8536 B9EGQ5;M0QXA7;O95785;B3KR89 B9EGQ5 273 289 WIZ Protein Wiz yes no 3 6.3675E-09 86.539 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2806 554 3070 4621;4622 7470;7471 7470 827 0 TQTPPLGQTPQLGLK ______________________________ TQTPPLGQTPQLGLKTNPPLIQEKPAKTSK R T Q L K T 0 0 0 0 0 3 0 2 0 0 3 1 0 0 3 0 3 0 0 0 0 0 15 0 1577.8777 E9PKF8;Q2TU89;H0Y3P2;D3DQV9;Q59G42;B4DZF2;P78344 E9PKF8 11 25 EIF4G2;AAG1 Eukaryotic translation initiation factor 4 gamma 2 yes no 2 0.0076649 46.592 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2807 511 3071 4623 7472 7472 1891 0 TRLEQEIATYR MEQQNQEYKILLDVKTRLEQEIATYRRLLE LDVKTRLEQEIATYRRLLEGEDAHLSSSQF K T R Y R R 1 2 0 0 0 1 2 0 0 1 1 0 0 0 0 0 2 0 1 0 0 0 11 1 1378.7205 CON__P02533;P02533;A0A024R1X6;Q14666;F5GWP8;CON__Q04695;CON__Q9QWL7;CON__Q6IFX2;Q04695;Q13092;CON__Q61782;B4DL17;K7ERE3;CON__ENSEMBL:ENSP00000377550;CON__P19012;B3KVF5;CON__P13646-1;A8K2H9;A1A4E9;P19012;P13646;A8MT21;CON__P35900;CON__Q9D312;CON__P08730-1;CON__A2A4G1;CON__Q9Z2K1;CON__Q3ZAW8;P35900;CON__P08779;P08779 CON__P02533 406 416 KRT14;KRT17;K14;KRT13;KRT15;KRT20;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 13;Keratin, type I cytoskeletal 20;Keratin, type I cytoskeletal 16 no no 2;3 8.3692E-25 103.91 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 68782000 68782000 0 0 0 0 68782000 68782000 0 + 2808 571;577 3072 4624;4625 7473;7474 7474 2 TRPSSTVIK LPKKAPPKAKTPAKKTRPSSTVIKKPSGGS KTPAKKTRPSSTVIKKPSGGSSKKPATSAR K T R I K K 0 1 0 0 0 0 0 0 0 1 0 1 0 0 1 2 2 0 0 1 0 0 9 1 987.57129 Q5SSJ5;B4E0N8 Q5SSJ5 509 517 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 2 0.012086 57.859 1 0.41313 0.65006 NaN 1 Median NaN NaN NaN 0 0 Median 0.41313 0.65006 NaN 1 0 Median 98131000 69380000 28751000 0 0 0 98131000 69380000 28751000 2809 842 3073 4626 7475 7475 1 TRSPSPDDILER MSVPSEPSSPQSSTRTRSPSPDDILERVAA STRTRSPSPDDILERVAADVKEYERENVDT R T R E R V 0 2 0 2 0 0 1 0 0 1 1 0 0 0 2 2 1 0 0 0 0 0 12 1 1384.6947 H0YDJ3;B4DZQ5;A0A024QZY5;Q13523 H0YDJ3 156 167 PRPF4B Serine/threonine-protein kinase PRP4 homolog yes no 2 0.00052989 62.104 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2810 9 3074 4627 7476 7476 12;13 0 TSAAACAVTDLSDDSDFDEK PKAKSTKPKPKSVSKTSAAACAVTDLSDDS CAVTDLSDDSDFDEKAKLKYYKEIEDRQKL K T S E K A 4 0 0 5 1 0 1 0 0 0 1 1 0 1 0 3 2 0 0 1 0 0 20 0 2116.8743 Q9NQZ2 Q9NQZ2 354 373 UTP3 Something about silencing protein 10 yes yes 2 7.6836E-74 142.39 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2811 933 3075 4628;4629 7477;7478 7477 1645;1646 0 TSASLEMNQGVSEER HQLESSLSPVEVFAKTSASLEMNQGVSEER TSASLEMNQGVSEERIHLGSSPKKGGNCDL K T S E R I 1 1 1 0 0 1 3 1 0 0 1 0 1 0 0 3 1 0 0 1 0 0 15 0 1636.7363 Q5JW53;A8K3X3;Q9H410;Q4G1A1 Q5JW53 38 52 DSN1 Kinetochore-associated protein DSN1 homolog yes no 2 0.0018703 41.412 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2812 350 3076 4630 7479 7479 71 535 0 TSDALQLENSQEIETSNK VSNSDKPLIQDSDLKTSDALQLENSQEIET ALQLENSQEIETSNKNDMTIDILHADGERP K T S N K N 1 0 2 1 0 2 3 0 0 1 2 1 0 0 0 3 2 0 0 0 0 0 18 0 2005.944 B3KXT2;A0A024R5V9;Q659A1 B3KXT2 178 195 NARG2;ICE2 Little elongation complex subunit 2 yes no 2 2.3488E-05 45.28 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2813 74 3077 4631 7480 7480 103 0 TSDISSPIGSHR SETDLESSCEETESKTSDISSPIGSHREEQ ESKTSDISSPIGSHREEQEGREGRGSRRTV K T S H R E 0 1 0 1 0 0 0 1 1 2 0 0 0 0 1 4 1 0 0 0 0 0 12 0 1255.6157 Q59GL0;Q13129 Q59GL0 962 973 RLF Zinc finger protein Rlf yes no 2 0.0033008 51.875 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2814 808 3078 4632 7481;7482 7481 1326;1327;1328 0 TSDISSPIGSHREEQEGR SETDLESSCEETESKTSDISSPIGSHREEQ ISSPIGSHREEQEGREGRGSRRTVAKGNLC K T S G R E 0 2 0 1 0 1 3 2 1 2 0 0 0 0 1 4 1 0 0 0 0 0 18 1 1983.9246 Q59GL0;Q13129 Q59GL0 962 979 RLF Zinc finger protein Rlf yes no 3 2.9665E-08 56.684 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2815 808 3079 4633;4634 7483;7484 7483 1326;1327;1328 0 TSEIEPKNSPEDLGLSLTGDSCK DGDMHSSSLTVECSKTSEIEPKNSPEDLGL SPEDLGLSLTGDSCKLMLSTSEYSQSPKME K T S C K L 0 0 1 2 1 0 3 2 0 1 3 2 0 0 2 4 2 0 0 0 0 0 23 1 2476.1639 B7Z3E7;A6NNK5;Q12888;C9JXV0;A8KA50 B7Z3E7 497 519 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 1.0349E-11 59.469 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2816 329 3080 4635 7485 7485 502 0 TSEIYVHR DIPKVQHVIHYQVPRTSEIYVHRSGRTARA IHYQVPRTSEIYVHRSGRTARATNEGLSLM R T S H R S 0 1 0 0 0 0 1 0 1 1 0 0 0 0 0 1 1 0 1 1 0 0 8 0 1003.5087 Q7Z4W0;A0A087WXU8;Q7Z4X3;B4DGI6;F5GYL3;B4E300;B4DM03;B4DKV2;G3V529;Q9GZR7 Q7Z4W0 294 301 DDX24 ATP-dependent RNA helicase DDX24 yes no 2 5.6068E-19 117.17 1 0.79989 1.07 NaN 1 Median NaN NaN NaN 0 0 Median 0.79989 1.07 NaN 1 0 Median 10066000 5076600 4989700 0 0 0 10066000 5076600 4989700 2817 195 3081 4636 7486;7487 7487 2 TSETDDGVVGKSSDGEDEQQVPK PPLLQVNRSSSNSPRTSETDDGVVGKSSDG VGKSSDGEDEQQVPKGPIHSPVELKHVHAT R T S P K G 0 0 0 4 0 2 3 3 0 0 0 2 0 0 1 3 2 0 0 3 0 0 23 1 2406.067 D9IVD5;A0A024R241;Q16649 D9IVD5 274 296 NFIL3 Nuclear factor interleukin-3-regulated protein yes no 3 4.3798E-09 46.953 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2818 41 3082 4637 7488 7488 40;41 0 TSGETTHTHREPAGDGK VGVKEELLAVGKFTRTSGETTHTHREPAGD GETTHTHREPAGDGKSIRTFKESPKQILDP R T S G K S 1 1 0 1 0 0 2 3 2 0 0 1 0 0 1 1 4 0 0 0 0 0 17 1 1779.8136 P46013 P46013 1047 1063 MKI67 Antigen KI-67 yes yes 3;4 1.394E-05 52.823 2 2 0.93628 1.3503 7.8899 4 Median 1.0052 1.305 10.757 2 0 Median 0.93628 1.3627 7.2325 2 0 Median 121240000 60643000 60600000 69451000 34580000 34871000 51792000 26063000 25729000 2819 762 3083 4638;4639;4640;4641 7489;7490;7491;7492;7493 7490 5 TSIIEAQYLR IDYSQMDELALLSLRTSIIEAQYLRYHDIE LLSLRTSIIEAQYLRYHDIEPGAVVKGTVL R T S L R Y 1 1 0 0 0 1 1 0 0 2 1 0 0 0 0 1 1 0 1 0 0 0 10 0 1192.6452 Q14690;B4DH82;B4DES7 Q14690 437 446 PDCD11 Protein RRP5 homolog yes no 2 0.0018849 69.672 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2820 816 3084 4642 7494 7494 1347;1997 0 TSPEMDIQNPDDGAR AERIEINRNEKKPMKTSPEMDIQNPDDGAR TSPEMDIQNPDDGARKPIPRDKVTENKRCL K T S A R K 1 1 1 3 0 1 1 1 0 1 0 0 1 0 2 1 1 0 0 0 0 0 15 0 1644.705 P46013;B4DRH3 P46013 3127 3141 MKI67 Antigen KI-67 yes no 2 1.2061E-08 92.593 2 4 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2821 762 3085;3086 4643;4644;4645;4646;4647;4648 7495;7496;7497;7498;7499;7500;7501;7502 7500 178 1221;1977 0 TSPKPAVVETVTTAK QIESLRQRFGGGQAKTSPKPAVVETVTTAK TSPKPAVVETVTTAKPQQIQALMDEVTKQV K T S A K P 2 0 0 0 0 0 1 0 0 0 0 2 0 0 2 1 4 0 0 3 0 0 15 1 1527.8508 H0YI94;H0YIP0;A8K492;P56192 H0YI94 90 104 MARS Methionine--tRNA ligase, cytoplasmic yes no 2 2.0381E-06 79.492 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2822 351 3087 4649;4650 7503;7504;7505 7504 536;1849 0 TSQPPVPQGEAEEDSQGK VRFRISNSSTANRVKTSQPPVPQGEAEEDS PPVPQGEAEEDSQGKEGPSGSGDSQLSASS K T S G K E 1 0 0 1 0 3 3 2 0 0 0 1 0 0 3 2 1 0 0 1 0 0 18 0 1882.8545 Q6AHZ7;Q6AWA4;Q12789 Q6AHZ7 725 742 DKFZp686A111;DKFZp686O0870;GTF3C1 General transcription factor 3C polypeptide 1 yes no 2 3.3088E-06 52.045 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2823 805 3088 4651 7506;7507 7507 1322 0 TSQVGAASAPAKESPRK TPAAKALLQAKASGKTSQVGAASAPAKESP QVGAASAPAKESPRKGAAPAPPGKTGPAVA K T S R K G 4 1 0 0 0 1 1 1 0 0 0 2 0 0 2 3 1 0 0 1 0 0 17 2 1683.8904 E7ETY2;J3KQ96;Q13428 E7ETY2 368 384 TCOF1 Treacle protein yes no 3 2.2951E-08 78.378 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2824 608 3089 4652;4653 7508;7509 7509 923 0 TSSAQVEGGVHSLHSYEK VRAMMYSGELKFEKRTSSAQVEGGVHSLHS AQVEGGVHSLHSYEKRLF____________ R T S E K R 1 0 0 0 0 1 2 2 2 0 1 1 0 0 0 4 1 0 1 2 0 0 18 0 1914.9072 H0Y4R1;P12268 H0Y4R1 450 467 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes no 3 2.7187E-11 84.653 1 4.7734 5.9503 NaN 1 Median NaN NaN NaN 0 0 Median 4.7734 5.9503 NaN 1 0 Median 9519500 2665400 6854000 0 0 0 9519500 2665400 6854000 2825 648 3090 4654 7510 7510 1 TSSAVWNSPPLQGAR LEDIFKKSKPRYHKRTSSAVWNSPPLQGAR TSSAVWNSPPLQGARVPSSLAYSLKKH___ R T S A R V 2 1 1 0 0 1 0 1 0 0 1 0 0 0 2 3 1 1 0 1 0 0 15 0 1569.79 Q9NQS7 Q9NQS7 892 906 INCENP Inner centromere protein yes yes 2 3.5341E-07 76.588 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2826 932 3091 4655;4656 7511;7512;7513;7514 7513 1643 0 TSSDDESEEDEDDLLQR AMGGVPAWAETTKRKTSSDDESEEDEDDLL SDDESEEDEDDLLQRTGNFISTSTSLPRGI K T S Q R T 0 1 0 5 0 1 4 0 0 0 2 0 0 0 0 3 1 0 0 0 0 0 17 0 1981.7872 Q9Y5J1;B2RAX6 Q9Y5J1 204 220 UTP18 U3 small nucleolar RNA-associated protein 18 homolog yes no 2 1.2993E-14 102.38 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2827 968 3092;3093 4657;4658;4659;4660 7515;7516;7517;7518;7519;7520;7521 7516 1754;1755;1756;2060 0 TSSEDNLYLAVLR QQLRVPQAEGLGRKRTSSEDNLYLAVLRAS KRTSSEDNLYLAVLRASEGKK_________ R T S L R A 1 1 1 1 0 0 1 0 0 0 3 0 0 0 0 2 1 0 1 1 0 0 13 0 1479.7569 Q8WXV6 Q8WXV6 19 31 PLEC1 yes yes 2 0.00065405 87.913 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2828 895 3094 4661 7522;7523 7522 1516;2026 0 TSSIADEGTYTLDSILR IQGVSGVKPTGLRKRTSSIADEGTYTLDSI SIADEGTYTLDSILRQLNSFHSVMCQHGMD R T S L R Q 1 1 0 2 0 0 1 1 0 2 2 0 0 0 0 3 3 0 1 0 0 0 17 0 1840.9054 A8CDT9;A0A087WY00;G3V394;F8WE88;F8W6H6;Q9Y4I1;E7ERV5;B5LY56;Q59FF5 A8CDT9 1623 1639 MYO5A Unconventional myosin-Va yes no 2 4.0107E-19 108.63 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2829 196 3095 4662 7524;7525;7526 7526 280;1810 0 TSSSSPANSDVEIDGIGR ANREKQRLIKSDQLKTSSSSPANSDVEIDG SSPANSDVEIDGIGRIAMVTKQVTDAESKL K T S G R I 1 1 1 2 0 0 1 2 0 2 0 0 0 0 1 5 1 0 0 1 0 0 18 0 1790.8282 O60293 O60293 801 818 ZFC3H1 Zinc finger C3H1 domain-containing protein yes yes 2 4.3776E-06 59.185 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2830 704 3096;3097 4663;4664 7527;7528 7528 1044;1045;1046;1939 0 TSTPLAPLPVQSQSDTK SPTQSPIRFQPAPAKTSTPLAPLPVQSQSD TPLAPLPVQSQSDTKDRLGSPLAVDEALRR K T S T K D 1 0 0 1 0 2 0 0 0 0 2 1 0 0 3 3 3 0 0 1 0 0 17 0 1768.9207 Q7RTP6 Q7RTP6 1289 1305 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 yes yes 2 1.3178E-08 72.932 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2831 867 3098;3099 4665;4666 7529;7530;7531 7531 1444;2013 0 TSYEEFTHK FNMCGFECRILPKCRTSYEEFTHKDGVWNL ILPKCRTSYEEFTHKDGVWNLQNEVTKERT R T S H K D 0 0 0 0 0 0 2 0 1 0 0 1 0 1 0 1 2 0 1 0 0 0 9 0 1140.5088 Q6P2Q9 Q6P2Q9 1202 1210 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.0012588 69.812 1 1.0909 1.435 NaN 1 Median NaN NaN NaN 0 0 Median 1.0909 1.435 NaN 1 0 Median 15165000 7009600 8155000 0 0 0 15165000 7009600 8155000 2832 860 3100 4667 7532 7532 1 TTGIVMDSGDGVTHTVPIYEGYALPHAILR YVAIQAVLSLYASGRTTGIVMDSGDGVTHT VPIYEGYALPHAILRLDLAGRDLTDYLMKI R T T L R L 2 1 0 2 0 0 1 4 2 3 2 0 1 0 2 1 4 0 2 3 0 0 30 0 3182.607 P63261;Q8WVW5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4DW52;B3KWQ3;Q6PJ43;B7ZAP6;I3L3I0;I3L1U9;I3L4N8;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L9;Q562L5;A0AUL6;Q562Z6;Q562Y8;Q562N2;Q562M5;Q562M3;Q562Y6;Q562N8 P63261 148 177 ACTG1;PS1TP5BP1;ACTB;ACT Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes no 4 5.3626E-10 45.901 1 2.8122 3.775 NaN 1 Median NaN NaN NaN 0 0 Median 2.8122 3.775 NaN 1 0 Median 32301000 10200000 22101000 0 0 0 32301000 10200000 22101000 2833 794 3101 4668 7533 7533 187 1 TTHFVEGGDAGNREDQINR WPFKLSSPRGGMKKKTTHFVEGGDAGNRED VEGGDAGNREDQINRLIRRMN_________ K T T N R L 1 2 2 2 0 1 2 3 1 1 0 0 0 1 0 0 2 0 0 1 0 0 19 1 2114.973 A8MUD9;A0A024R814;P18124;O95036 A8MUD9 184 202 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 yes no 3;4 1.6075E-06 52.298 2 2 0.70157 1.0635 11.24 4 Median 0.72933 0.9622 1.0706 2 0 Median 0.67121 1.1686 0.25496 2 0 Median 412710000 240810000 171900000 293300000 173930000 119370000 119410000 66877000 52532000 2834 99 3102 4669;4670;4671;4672 7534;7535;7536;7537;7538;7539;7540;7541;7542;7543;7544 7537 11 TTKIPCDSPQSDPVDTPTSTK FQTPGHTEELVAAGKTTKIPCDSPQSDPVD DSPQSDPVDTPTSTKQRPKRSIRKADVEGE K T T T K Q 0 0 0 3 1 1 0 0 0 1 0 2 0 0 4 3 5 0 0 1 0 0 21 1 2274.0686 P46013 P46013 1246 1266 MKI67 Antigen KI-67 yes yes 3 3.1337E-10 53.998 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2835 762 3103 4673 7545 7545 1213;1214 0 TTPSGLQIMPLK PSSGGDRATKTVSYRTTPSGLQIMPLKKSQ SYRTTPSGLQIMPLKKSQNGMENGDAGSEK R T T L K K 0 0 0 0 0 1 0 1 0 1 2 1 1 0 2 1 2 0 0 0 0 0 12 0 1284.7112 A0A0B4J291;Q8N8U2 A0A0B4J291 139 150 CDYL2 Chromodomain Y-like protein 2 yes no 2 0.0073165 49.448 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2836 236 3104 4674 7546 7546 49 1820 0 TTPSYVAFTDTER QHGKVEIIANDQGNRTTPSYVAFTDTERLI NRTTPSYVAFTDTERLIGDAAKNQVAMNPT R T T E R L 1 1 0 1 0 0 1 0 0 0 0 0 0 1 1 1 4 0 1 1 0 0 13 0 1486.694 E9PKE3;V9HW22;Q53GZ6;P11142;B3KTV0;Q53HF2;E9PNE6;E9PN25;E9PPY6;E9PQQ4;E9PQK7;E9PK54;E9PLF4;B4DTX2;E9PI65;A0A024R6B5;P54652;B3KUS2;B4DFN9;B4DI39;B4DWK5;A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4E1T6;B4DNX1;Q53FA3;B2RCQ9;B4DI54;P34931;B4DNV4;B4DXY3;Q53FC7;B3KSM6;B2R6X5;P48741;P17066 E9PKE3 37 49 HSPA8;HEL-S-72p;HSPA2;HEL-S-103;HSPA1B;HSPA1A;HSPA1L;HSPA7;HSPA6 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1-like;Putative heat shock 70 kDa protein 7;Heat shock 70 kDa protein 6 no no 2 0.00064037 57.836 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2837 623;256;405 3105 4675 7547 7547 1 TTSFFLNSPEK CAVPVETEWLKSKDRTTSFFLNSPEKEHQE SKDRTTSFFLNSPEKEHQEMDEGSQSLEKL R T T E K E 0 0 1 0 0 0 1 0 0 0 1 1 0 2 1 2 2 0 0 0 0 0 11 0 1269.6241 Q8WYP5;B3KTD2;B3KVE5 Q8WYP5 1276 1286 AHCTF1 Protein ELYS yes no 2 4.1663E-52 142.51 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2838 897 3106 4676;4677 7548;7549;7550;7551;7552;7553;7554;7555 7549 1519 0 TVANLLSGKSPR AGKTGNSMPHPATGKTVANLLSGKSPRKSA TGKTVANLLSGKSPRKSAEPSANTTLVSET K T V P R K 1 1 1 0 0 0 0 1 0 0 2 1 0 0 1 2 1 0 0 1 0 0 12 1 1241.7092 E7ETY2;J3KQ96;Q13428 E7ETY2 147 158 TCOF1 Treacle protein yes no 2;3 0.0012948 85.006 1 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2839 608 3107 4678;4679;4680 7556;7557;7558;7559;7560 7557 924 0 TVDMESTEVFTK LNREQLSTSEENSKKTVDMESTEVFTKKTK SKKTVDMESTEVFTKKTKLTEEEKNRLNFL K T V T K K 0 0 0 1 0 0 2 0 0 0 0 1 1 1 0 1 3 0 0 2 0 0 12 0 1385.6384 CON__P02663 CON__P02663 138 149 yes yes 2 0.0021559 46.069 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 + 2840 573 3108 4681 7561 7561 114 853;1904 0 TVDSQGPTPVCTPTFLER KKKKKVSGTLDTPEKTVDSQGPTPVCTPTF SQGPTPVCTPTFLERRKSQVAELNDDDKDD K T V E R R 0 1 0 1 1 1 1 1 0 0 1 0 0 1 3 1 4 0 0 2 0 0 18 0 2003.9622 Q9BYG3;H7BZL0;C9J808 Q9BYG3 227 244 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein yes no 2 2.7957E-97 156.85 4 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2841 922 3109;3110;3111 4682;4683;4684;4685;4686 7562;7563;7564;7565;7566;7567;7568;7569;7570 7566 1604;2035;2036;2037 0 TVETVEGGGLVVILLR VLQDFEALTPNLLARTVETVEGGGLVVILL VETVEGGGLVVILLRTMNSLKQLYTVTMDV R T V L R T 0 1 0 0 0 0 2 3 0 1 3 0 0 0 0 0 2 0 0 4 0 0 16 0 1653.9665 Q9H0A0;E9PMU0;Q05CW7 Q9H0A0 137 152 NAT10 N-acetyltransferase 10 no no 2 0.00039274 46.592 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2053100 2053100 0 0 0 0 2053100 2053100 0 2842 924;801 3112 4687 7571 7571 1 TVFAEHISDECK IVGYVETPRGLRTFKTVFAEHISDECKRRF TFKTVFAEHISDECKRRFYKNWHKSKKKAH K T V C K R 1 0 0 1 1 0 2 0 1 1 0 1 0 1 0 1 1 0 0 1 0 0 12 0 1434.6449 B3KS36;P39023;H7C3M2;B5MCW2;H7C422;Q9NY85;G5E9G0;Q8TBW1;Q96QL0;B4DN06;F8WCR1 B3KS36 104 115 RPL3;rpl3 60S ribosomal protein L3 yes no 2;3 1.174E-08 103.08 2 2 0.64249 0.80803 21.649 4 Median 0.75964 0.92155 2.6102 2 0 Median 0.50946 0.65226 14.307 2 0 Median 62333000 41778000 20555000 21535000 11704000 9831300 40798000 30074000 10724000 2843 443 3113 4688;4689;4690;4691 7572;7573;7574;7575;7576 7576 5 TVFAEHISDECKR IVGYVETPRGLRTFKTVFAEHISDECKRRF FKTVFAEHISDECKRRFYKNWHKSKKKAHL K T V K R R 1 1 0 1 1 0 2 0 1 1 0 1 0 1 0 1 1 0 0 1 0 0 13 1 1590.746 B3KS36;P39023;H7C3M2;B5MCW2;H7C422;Q9NY85;G5E9G0;Q8TBW1;Q96QL0;B4DN06;F8WCR1 B3KS36 104 116 RPL3;rpl3 60S ribosomal protein L3 yes no 3 0.00053732 57.804 1 1 0.60972 0.79454 27.834 2 Median 0.74121 0.96736 NaN 1 0 Median 0.50155 0.65259 NaN 1 0 Median 31738000 19031000 12707000 24863000 14958000 9904900 6875000 4073300 2801800 2844 443 3114 4692;4693 7577;7578 7577 2 TVFSPTLPAAR KSLTSWTNDQGARRKTVFSPTLPAARSSLG ARRKTVFSPTLPAARSSLGSLQTPEAVTTR K T V A R S 2 1 0 0 0 0 0 0 0 0 1 0 0 1 2 1 2 0 0 1 0 0 11 0 1158.6397 A8K9U6;Q7Z2W4;Q05DV5;C9J6P4 A8K9U6 375 385 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 2 0.0031248 59.198 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2845 380 3115 4694;4695 7579;7580;7581;7582 7579 582 0 TVLPTVPESPEEEVK NRGRYVDGLFLPPSKTVLPTVPESPEEEVK TVLPTVPESPEEEVKASQLSVQQNKLSVQS K T V V K A 0 0 0 0 0 0 4 0 0 0 1 1 0 0 3 1 2 0 0 3 0 0 15 0 1652.8509 B4DLG2;O75152;Q0D2N5;E9PBY7;E9PQ61 B4DLG2 46 60 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 2 7.1953E-13 100.54 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2846 479 3116 4696;4697 7583;7584;7585 7584 696 0 TVQIEASTVEIEER YPERVIPGAAEKIERTVQIEASTVEIEERG RTVQIEASTVEIEERGVKLRLTVVDTPGYG R T V E R G 1 1 0 0 0 1 4 0 0 2 0 0 0 0 0 1 2 0 0 2 0 0 14 0 1602.8101 B5MD47;C9JZI2;C9IY94;C9IZU3;C9JQJ4;C9J938;H7C310;C9JB25;C9J2Q4;B5MCX3;Q15019 B5MD47 38 51 SEPT2 Septin-2 yes no 2 0.0007856 53.569 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1483200 1483200 0 1483200 1483200 0 0 0 0 2847 532 3117 4698 7586 7586 1 TVQSLEIDLDSMR AEVGAAETTLTELRRTVQSLEIDLDSMRNL RRTVQSLEIDLDSMRNLKASLENSLREVEA R T V M R N 0 1 0 2 0 1 1 0 0 1 2 0 1 0 0 2 1 0 0 1 0 0 13 0 1505.7396 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__H-INV:HIT000015463 F8VZY9 302 314 KRT18 Keratin, type I cytoskeletal 18 yes no 2 0.0026862 58.831 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2848 134 3118 4699 7587 7587 27 196 0 TVSLGAGAKDELHIVEAEAMNYEGSPIK FKVDNDENEHQLSLRTVSLGAGAKDELHIV IVEAEAMNYEGSPIKVTLATLKMSVQPTVS R T V I K V 4 0 1 1 0 0 4 3 1 2 2 2 1 0 1 2 1 0 1 2 0 0 28 1 2928.4539 A0A140VJQ2;A0A0S2Z4G7;A4ZU86;A0A0S2Z491;P06748 A0A140VJQ2 46 73 NPM1 Nucleophosmin yes no 3 8.2072E-147 160.35 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2849 263 3119 4700 7588;7589 7589 53 359 0 TVSPDEITTRPMDK DMEITRSHTTALECKTVSPDEITTRPMDKT KTVSPDEITTRPMDKTVVFVDNHVELEMTE K T V D K T 0 1 0 2 0 0 1 0 0 1 0 1 1 0 2 1 3 0 0 1 0 0 14 1 1588.7767 E9PPJ1;Q8NG31 E9PPJ1 928 941 CASC5 Protein CASC5 yes no 2 1.4576E-10 103.14 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2850 627 3120 4701;4702 7590;7591 7591 134 953 0 TVSPPIR TVAASFQSTSVKSPKTVSPPIRKGWSMSEQ STSVKSPKTVSPPIRKGWSMSEQSEESVGG K T V I R K 0 1 0 0 0 0 0 0 0 1 0 0 0 0 2 1 1 0 0 1 0 0 7 0 768.44939 B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2;F8VQE1 B4DN52 526 532 LIMA1 LIM domain and actin-binding protein 1 yes no 2 0.0092491 69.825 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2851 485 3121 4703;4704 7592;7593;7594;7595 7592 707 0 TVSPPIRK TVAASFQSTSVKSPKTVSPPIRKGWSMSEQ TSVKSPKTVSPPIRKGWSMSEQSEESVGGR K T V R K G 0 1 0 0 0 0 0 0 0 1 0 1 0 0 2 1 1 0 0 1 0 0 8 1 896.54435 B4DN52;Q53GG0;Q9UHB6;F8VS07;B3KTW2;F8VQE1 B4DN52 526 533 LIMA1 LIM domain and actin-binding protein 1 yes no 2 0.0014157 79.974 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2852 485 3122 4705;4706 7596;7597;7598;7599;7600;7601;7602 7598 707 0 TVSSPPTSPRPGSAATVSASTSNIIPPR QGATAGASSELDASKTVSSPPTSPRPGSAA AATVSASTSNIIPPRHQKPAGAPATKKKQQ K T V P R H 3 2 1 0 0 0 0 1 0 2 0 0 0 0 6 7 4 0 0 2 0 0 28 1 2734.425 V9HWK0;Q71V07;O76094 V9HWK0 618 645 HEL103;SRP72 Signal recognition particle subunit SRP72 yes no 3 3.0367E-24 66.447 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2853 713 3123 4707 7603 7603 1070;1071;1072;1948 0 TVTAMDVVYALK VIRDAVTYTEHAKRKTVTAMDVVYALKRQG KRKTVTAMDVVYALKRQGRTLYGFGG____ K T V L K R 2 0 0 1 0 0 0 0 0 0 1 1 1 0 0 0 2 0 1 3 0 0 12 0 1309.6952 B2R4R0;P62805;Q0VAS5 B2R4R0 81 92 HIST1H4H;HIST1H4A Histone H4 yes no 2 1.5666E-29 127.4 3 2 0.72546 0.85533 22.789 5 Median 0.7336 0.99893 13.139 3 0 Plateau 0.52879 0.66227 13.532 2 0 Median 441880000 295230000 146650000 12480000 6482200 5997900 429400000 288750000 140650000 2854 400 3124;3125 4708;4709;4710;4711;4712 7604;7605;7606;7607;7608;7609;7610;7611;7612;7613;7614 7608 81 11 TVTLGGDVFDPHGTLSGGAR DNAKKVAFDKRIMTRTVTLGGDVFDPHGTL GDVFDPHGTLSGGARSQAASILTKFQELKD R T V A R S 1 1 0 2 0 0 0 5 1 0 2 0 0 1 1 1 3 0 0 2 0 0 20 0 1955.9701 B7ZLZ7;A0A024R158;O95347;A8K984;B3KMB1;Q2KQ72;Q05BV1;B3KM27 B7ZLZ7 649 668 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 yes no 3 1.7866E-09 49.528 1 0.62397 0.83524 NaN 1 Median NaN NaN NaN 0 0 Median 0.62397 0.83524 NaN 1 0 Median 7594000 4577400 3016600 0 0 0 7594000 4577400 3016600 2855 27 3126 4713 7615;7616 7616 2 TWTQTYK ILNSTTIEISELPVRTWTQTYKEQVLEPML EISELPVRTWTQTYKEQVLEPMLNGTEKTP R T W Y K E 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 3 1 1 0 0 0 7 0 926.44978 P11388 P11388 930 936 TOP2A DNA topoisomerase 2-alpha yes yes 2 0.028952 63.306 1 0.70223 0.91264 NaN 1 Median NaN NaN NaN 0 0 Median 0.70223 0.91264 NaN 1 0 Median 11955000 7546100 4408600 0 0 0 11955000 7546100 4408600 2856 734 3127 4714 7617 7617 1 TYNASITLQQQLK HLQDLMEGLTAKVFRTYNASITLQQQLKEL FRTYNASITLQQQLKELTAPDENIPAKILS R T Y L K E 1 0 1 0 0 3 0 0 0 1 2 1 0 0 0 1 2 0 1 0 0 0 13 0 1506.8042 P11387;Q9BVT2 P11387 591 603 TOP1 DNA topoisomerase 1 yes no 2 0.009525 46.955 2 0.83585 1.08 1.1976 2 Median NaN NaN NaN 0 0 Median 0.83585 1.08 1.1976 2 0 Median 14540000 7336700 7203000 0 0 0 14540000 7336700 7203000 2857 733 3128 4715;4716 7618;7619;7620;7621 7620 4 TYSLGSALRPSTSR SRPSSSRSYVTTSTRTYSLGSALRPSTSRS RTYSLGSALRPSTSRSLYASSPGGVYATRS R T Y S R S 1 2 0 0 0 0 0 1 0 0 2 0 0 0 1 4 2 0 1 0 0 0 14 1 1494.7791 V9HWE1;P08670;Q53HU8;B0YJC4;B3KRK8;A0A1B0GTT5;A0A1B0GUA0;A0A1B0GVG8 V9HWE1 37 50 HEL113;VIM Vimentin yes no 3 0.00167 44.457 1 0.70297 1.1326 NaN 1 Median NaN NaN NaN 0 0 Median 0.70297 1.1326 NaN 1 0 Median 15376000 8599800 6776600 0 0 0 15376000 8599800 6776600 2858 731 3129 4717 7622;7623 7622 2 VAADLQLSTPQK QPVDQPTTESCSTLKVAADLQLSTPQKASQ TLKVAADLQLSTPQKASQHQVLFLLSDVAH K V A Q K A 2 0 0 1 0 2 0 0 0 0 2 1 0 0 1 1 1 0 0 1 0 0 12 0 1269.6929 A7E234;Q9H582;Q9H835;Q569I6 A7E234 157 168 ZNF644 Zinc finger protein 644 yes no 2 0.00029158 87.913 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2859 331 3130 4718;4719 7624;7625;7626 7625 505;1845 0 VAASPKSPTAALNESLVECPK EPLVTFQGETENREKVAASPKSPTAALNES SPTAALNESLVECPKCNIQYPATEHRDLLV K V A P K C 4 0 1 0 1 0 2 0 0 0 2 2 0 0 3 3 1 0 0 2 0 0 21 1 2168.1147 Q53EZ4 Q53EZ4 422 442 CEP55 Centrosomal protein of 55 kDa yes yes 3 7.3407E-17 84.214 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2860 834 3131 4720 7627 7627 1381;1382;2002 0 VAASTFSSDSKK MKTKELIGSMKINGRVAASTFSSDSKKVYA NGRVAASTFSSDSKKVYASSGDGEVYVWDV R V A K K V 2 0 0 1 0 0 0 0 0 0 0 2 0 1 0 4 1 0 0 1 0 0 12 1 1226.6143 Q9Y5J1;B2RAX6;J3QR85;J3KSR7 Q9Y5J1 385 396 UTP18 U3 small nucleolar RNA-associated protein 18 homolog yes no 3 0.008473 25.98 1 0.72573 0.88695 NaN 1 Median NaN NaN NaN 0 0 Median 0.72573 0.88695 NaN 1 0 Median 8581300 5186300 3395100 0 0 0 8581300 5186300 3395100 2861 968 3132 4721 7628 7628 1 VAFDKR FGTTFVCDNMDNAKKVAFDKRIMTRTVTLG CDNMDNAKKVAFDKRIMTRTVTLGGDVFDP K V A K R I 1 1 0 1 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 1 0 0 6 1 734.40752 B7ZLZ7;A0A024R158;O95347;A8K984;B3KMB1;Q2KQ72;Q05BV1;B3KM27 B7ZLZ7 639 644 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 yes no 2 0.012928 54.765 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 8718500 8718500 0 0 0 0 8718500 8718500 0 2862 27 3133 4722 7629 7629 1 VAFERGEEPGK VTQPRRISAVSVAERVAFERGEEPGKSCGY VAERVAFERGEEPGKSCGYSVRFESILPRP R V A G K S 1 1 0 0 0 0 3 2 0 0 0 1 0 1 1 0 0 0 0 1 0 0 11 1 1217.6041 Q08211;Q58F26;Q6PJK6 Q08211 457 467 DHX9 ATP-dependent RNA helicase A yes no 3 0.02498 22.046 1 0.43563 0.64558 NaN 1 Median NaN NaN NaN 0 0 Median 0.43563 0.64558 NaN 1 0 Median 22483000 14889000 7594300 0 0 0 22483000 14889000 7594300 2863 802 3134 4723 7630 7630 0 VAFSEITSPSK TSCASLDSPGRIKRKVAFSEITSPSKRSQP IKRKVAFSEITSPSKRSQPDKLQTLSPALK K V A S K R 1 0 0 0 0 0 1 0 0 1 0 1 0 1 1 3 1 0 0 1 0 0 11 0 1164.6027 B7Z8H0;Q96F82;A8K794;Q13415 B7Z8H0 266 276 ORC1L;ORC1 Origin recognition complex subunit 1 yes no 2 1.1958E-39 133.32 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2864 367 3135 4724;4725 7631;7632;7633;7634;7635 7632 566;1859 0 VAFSEITSPSKR TSCASLDSPGRIKRKVAFSEITSPSKRSQP KRKVAFSEITSPSKRSQPDKLQTLSPALKA K V A K R S 1 1 0 0 0 0 1 0 0 1 0 1 0 1 1 3 1 0 0 1 0 0 12 1 1320.7038 B7Z8H0;Q96F82;A8K794;Q13415 B7Z8H0 266 277 ORC1L;ORC1 Origin recognition complex subunit 1 yes no 3 0.0029699 42.958 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2865 367 3136 4726 7636 7636 566;1859 0 VAGIESHSELQISR ECEKARQELQEAKEKVAGIESHSELQISRQ KVAGIESHSELQISRQQNELAELHANLARA K V A S R Q 1 1 0 0 0 1 2 1 1 2 1 0 0 0 0 3 0 0 0 1 0 0 14 0 1524.7896 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q59HB8;A0A024R5G4 A0A087WY61 856 869 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 yes no 3 0.00035551 59.709 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 8583400 8583400 0 0 0 0 8583400 8583400 0 2866 71 3137 4727 7637 7637 1 VALGHGLK DNIQAGELTEGIWRRVALGHGLKLLTKNGH TEGIWRRVALGHGLKLLTKNGHVYKYDGFR R V A L K L 1 0 0 0 0 0 0 2 1 0 2 1 0 0 0 0 0 0 0 1 0 0 8 0 793.48102 A0A024R4Z6;Q08945;Q59GH7 A0A024R4Z6 56 63 SSRP1 FACT complex subunit SSRP1 yes no 2 0.0088008 64.803 1 0.79555 1.0049 NaN 1 Median NaN NaN NaN 0 0 Median 0.79555 1.0049 NaN 1 0 Median 19418000 11316000 8102600 0 0 0 19418000 11316000 8102600 2867 65 3138 4728 7638 7638 1 VALKASEPVAR V A A R 3 1 0 0 0 0 1 0 0 0 1 1 0 0 1 1 0 0 0 2 0 0 11 1 1139.6663 REV__Q8NFD2 yes no 2 0.029739 60.255 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 + 2868 979 3139 4729;4730 7639;7640;7641 7641 1767 0 VALVNDSLSDVTSTTSSR DVQATGRIADDADPRVALVNDSLSDVTSTT VNDSLSDVTSTTSSRVDDHDSEEICLDHLC R V A S R V 1 1 1 2 0 0 0 0 0 0 2 0 0 0 0 5 3 0 0 3 0 0 18 0 1850.9222 A8K9U6;Q7Z2W4;Q05DV5 A8K9U6 486 503 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 2 1.0698E-05 51.546 1 1.6614 2.2205 NaN 1 Median NaN NaN NaN 0 0 Median 1.6614 2.2205 NaN 1 0 Median 10198000 3869800 6327900 0 0 0 10198000 3869800 6327900 2869 380 3140 4731 7642;7643 7643 2 VANVSLLALYK HAVGDIPGVRFKVVKVANVSLLALYKGKKE KVVKVANVSLLALYKGKKERPRS_______ K V A Y K G 2 0 1 0 0 0 0 0 0 0 3 1 0 0 0 1 0 0 1 2 0 0 11 0 1189.7071 A8K517;P62266 A8K517 125 135 RPS23 40S ribosomal protein S23 yes no 2 0.019711 38.567 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1972600 1972600 0 0 0 0 1972600 1972600 0 2870 358 3141 4732 7644 7644 1 VAPEEHPVLLTEAPLNPK DMEKIWHHTFYNELRVAPEEHPVLLTEAPL EEHPVLLTEAPLNPKANREKMTQIMFETFN R V A P K A 2 0 1 0 0 0 3 0 1 0 3 1 0 0 4 0 1 0 0 2 0 0 18 0 1953.0571 P63261;B4E3A4;Q8WVW5;Q53GK6;Q53G99;Q53G76;Q1KLZ0;P60709;B4DVQ0;B4E335;B4DW52;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;A1E282;G5E9R0;E7EVS6;Q562Z7;Q562X9;Q562S0;Q562R8;Q562P0;Q562N0;Q562L9;Q562L5;Q562Y6;Q562N8;Q562Z4;Q562V5;Q562U2;Q562N6;Q562P9;Q562N4;Q562L6 P63261 96 113 ACTG1;PS1TP5BP1;ACTB;ACT Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes no 3 2.0477E-06 49.559 1 1 1.3544 1.6396 116.75 2 Median 0.60455 0.71811 NaN 1 0 Median 3.0342 3.7435 NaN 1 0 Median 32486000 11605000 20882000 8344500 5595000 2749500 24142000 6009800 18132000 2871 794 3142 4733;4734 7645;7646;7647 7646 3 VAPVINNGSPTILGK VKSVSSVLSSLTPAKVAPVINNGSPTILGK VAPVINNGSPTILGKRSYEQHNGVDGNMKK K V A G K R 1 0 2 0 0 0 0 2 0 2 1 1 0 0 2 1 1 0 0 2 0 0 15 0 1478.8457 Q59FW1;H0Y4T7;A0A024R6P5;E7ESY4;Q13330;Q9BRL8;F8W9Y9 Q59FW1 360 374 MTA1 Metastasis-associated protein MTA1 yes no 2 6.3971E-26 114.69 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2872 83 3143 4735;4736 7648;7649;7650;7651 7649 115 0 VAQREEELEETGNQHNDVEIEEAGEEEEK VVRNEEQKAEQEEGKVAQREEELEETGNQH HNDVEIEEAGEEEEKEIAIVHSDAEKEQEE K V A E K E 2 1 2 1 0 2 12 2 1 1 1 1 0 0 0 0 1 0 0 2 0 0 29 1 3368.4764 B4E392;B4DTD4;A8K964;Q9H307 B4E392 32 60 PNN Pinin yes no 4 0.0010289 20.652 1 0.41205 0.53105 NaN 1 Median 0.41205 0.53105 NaN 1 0 Median NaN NaN NaN 0 0 Median 9999400 6592100 3407300 9999400 6592100 3407300 0 0 0 2873 377 3144 4737 7652;7653 7653 2 VASSPVMVSNPATR MAVTPGTTTLPATVKVASSPVMVSNPATRM KVASSPVMVSNPATRMLKTAAAQVGTSVSS K V A T R M 2 1 1 0 0 0 0 0 0 0 0 0 1 0 2 3 1 0 0 3 0 0 14 0 1414.7238 A6NEM2;P51610 A6NEM2 595 608 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 2 0.00016886 67.115 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2874 325 3145 4738;4739 7654;7655;7656 7656 68 497 0 VATTSVITIVK TFARTVARGPVAPSKVATTSVITIVKSTEL APSKVATTSVITIVKSTELSSTSVPFSAAS K V A V K S 1 0 0 0 0 0 0 0 0 2 0 1 0 0 0 1 3 0 0 3 0 0 11 0 1130.6911 A0A024R804;A8WFP5;O60675 A0A024R804 131 141 MAFK Transcription factor MafK yes no 2 0.015424 45.368 1 1.5428 2.0519 NaN 1 Median NaN NaN NaN 0 0 Median 1.5428 2.0519 NaN 1 0 Median 4596800 1413100 3183700 0 0 0 4596800 1413100 3183700 2875 98 3146 4740 7657;7658 7657 2 VATVSLPR IMLIKLSSPATLNSRVATVSLPRSCAAAGT PATLNSRVATVSLPRSCAAAGTECLISGWG R V A P R S 1 1 0 0 0 0 0 0 0 0 1 0 0 0 1 1 1 0 0 2 0 0 8 0 841.50215 CON__P00761 CON__P00761 108 115 yes yes 2 6.9668E-05 75.109 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 45724000 45724000 0 13191000 13191000 0 32532000 32532000 0 + 2876 569 3147 4741;4742 7659;7660 7660 2 VAVEEVDEEGK ESRSSFSQHARTSGRVAVEEVDEEGKFVRL TSGRVAVEEVDEEGKFVRLRNKSNEDQSMG R V A G K F 1 0 0 1 0 0 4 1 0 0 0 1 0 0 0 0 0 0 0 3 0 0 11 0 1202.5667 P02545;W8QEH3;Q5I6Y5;Q5TCI8;A0A0C4DGC5;B4DFR3 P02545 440 450 LMNA Prelamin-A/C;Lamin-A/C yes no 2 0.0017424 76.228 1 1.2212 1.6009 NaN 1 Median NaN NaN NaN 0 0 Median 1.2212 1.6009 NaN 1 0 Median 6530000 2860200 3669900 0 0 0 6530000 2860200 3669900 2877 725 3148 4743 7661;7662 7662 2 VAVNALAVGEPGTASKPASPIGGPTQEEK PSPAPLTPQVGVPGRVAVNALAVGEPGTAS SKPASPIGGPTQEEKTRLLKERLDQIYLVN R V A E K T 5 0 1 0 0 1 3 4 0 1 1 2 0 0 4 2 2 0 0 3 0 0 29 1 2774.445 A7E2D7;Q96L91 A7E2D7 1597 1625 EP400 E1A-binding protein p400 yes no 3 9.4538E-29 72.474 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2878 332 3149 4744 7663 7663 506 0 VAYVSFGPHAGK ______________________________ VGRVAYVSFGPHAGKLVAIVDVIDQNRALV R V A G K L 2 0 0 0 0 0 0 2 1 0 0 1 0 1 1 1 0 0 1 2 0 0 12 0 1231.635 A8K7N0;Q6IPH7;P50914;E7EPB3;A0PJ62;B7Z6S8 A8K7N0 12 23 RPL14 60S ribosomal protein L14 yes no 3 0.012559 20.857 1 0.61012 0.75842 NaN 1 Median NaN NaN NaN 0 0 Median 0.61012 0.75842 NaN 1 0 Median 30191000 17647000 12544000 0 0 0 30191000 17647000 12544000 2879 370 3150 4745 7664 7664 1 VDAVHADVYR AAGTLDASTKIYAVRVDAVHADVYRVLGGL IYAVRVDAVHADVYRVLGGLGKDAPSLEEV R V D Y R V 2 1 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 3 0 0 10 0 1143.5673 B4DRG7;E9PHA2;A8K4T8;Q15003;C9J470 B4DRG7 145 154 NCAPH Condensin complex subunit 2 yes no 2;3 0.0027356 83.883 2 0.54699 0.72587 6.7581 2 Median NaN NaN NaN 0 0 Median 0.54699 0.72587 6.7581 2 0 Median 70148000 47039000 23109000 0 0 0 70148000 47039000 23109000 2880 354 3151 4746;4747 7665;7666 7666 2 VDEVPDGAVKPPTNK LIFAKMKGYPHWPARVDEVPDGAVKPPTNK VDEVPDGAVKPPTNKLPIFFFGTHETAFLG R V D N K L 1 0 1 2 0 0 1 1 0 0 0 2 0 0 3 0 1 0 0 3 0 0 15 1 1564.8097 O75475;Q05CM9;Q8N4N4 O75475 25 39 PSIP1 PC4 and SFRS1-interacting protein yes no 3 0.0016677 38.376 1 0.54929 0.68219 NaN 1 Median NaN NaN NaN 0 0 Median 0.54929 0.68219 NaN 1 0 Median 18334000 10962000 7371300 0 0 0 18334000 10962000 7371300 2881 710 3152 4748 7667;7668;7669 7667 3 VDGPRSPSYGR KFRSHEGETAYIRVKVDGPRSPSYGRSRSR IRVKVDGPRSPSYGRSRSRSRSRSRSRSRS K V D G R S 0 2 0 1 0 0 0 2 0 0 0 0 0 0 2 2 0 0 1 1 0 0 11 1 1189.584 J3KSR8;B7Z570;A8K1L8;J3KTL2;Q07955 J3KSR8 89 99 SRSF1 Serine/arginine-rich splicing factor 1 yes no 2;3 0.0011956 57.106 4 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2882 340 3153 4749;4750;4751;4752 7670;7671;7672;7673;7674 7670 515 0 VDIRPQLLK SLIRKYVSQYYPKLRVDIRPQLLKNALQRA YYPKLRVDIRPQLLKNALQRAVERGQLEQI R V D L K N 0 1 0 1 0 1 0 0 0 1 2 1 0 0 1 0 0 0 0 1 0 0 9 1 1080.6655 Q5SSJ5;X6RGJ2;B0QZK4;Q5SWC8 Q5SSJ5 294 302 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 2 0.015319 48.794 1 0.39895 0.52778 NaN 1 Median NaN NaN NaN 0 0 Median 0.39895 0.52778 NaN 1 0 Median 8702100 5645900 3056200 0 0 0 8702100 5645900 3056200 2883 842 3154 4753 7675 7675 1 VDLYQQASPPDALR KATPSTYSGVFRTQRVDLYQQASPPDALRW RVDLYQQASPPDALRWIPKPWERTGPPPRE R V D L R W 2 1 0 2 0 2 0 0 0 0 2 0 0 0 2 1 0 0 1 1 0 0 14 0 1571.7944 P48634;B4DQ12;B4DLY2 P48634 2106 2119 PRRC2A Protein PRRC2A yes no 2 6.8383E-05 82.651 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2884 766 3155 4754 7676 7676 1235 0 VDNDENEHQLSLR LFGCELKADKDYHFKVDNDENEHQLSLRTV FKVDNDENEHQLSLRTVSLGAGAKDELHIV K V D L R T 0 1 2 2 0 1 2 0 1 0 2 0 0 0 0 1 0 0 0 1 0 0 13 0 1567.7227 A0A140VJQ2;A0A0S2Z4G7;A4ZU86;A0A0S2Z491;P06748;E5RGW4 A0A140VJQ2 33 45 NPM1 Nucleophosmin yes no 2;3 1.1013E-22 119.69 1 2 0.85002 1.1448 29.064 3 Median 0.56844 0.71033 NaN 1 0 Median 0.86891 1.173 3.4503 2 0 Median 160410000 90159000 70250000 27681000 17944000 9736400 132730000 72215000 60513000 2885 263 3156 4755;4756;4757 7677;7678;7679;7680;7681;7682;7683;7684 7680 8 VDNLTYRTSPDTLR YGRPPPDVEGMTSLKVDNLTYRTSPDTLRR KVDNLTYRTSPDTLRRVFEKYGRVGDVYIP K V D L R R 0 2 1 2 0 0 0 0 0 0 2 0 0 0 1 1 3 0 1 1 0 0 14 1 1649.8373 B3KVY2;Q8NAK9;B3KUY1;Q53FN0;A0A024R8U5;Q01130;B3KX15;J3QL05;J3KP15;Q6NXQ0;Q8N220;B3KUF7 B3KVY2 18 31 SFRS2;SRSF2 Serine/arginine-rich splicing factor 2 yes no 2;3 0.00077034 63.918 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2886 106 3157 4758;4759 7685;7686;7687 7687 157;1795;1796 0 VDNLTYRTSPDTLRR YGRPPPDVEGMTSLKVDNLTYRTSPDTLRR VDNLTYRTSPDTLRRVFEKYGRVGDVYIPR K V D R R V 0 3 1 2 0 0 0 0 0 0 2 0 0 0 1 1 3 0 1 1 0 0 15 2 1805.9384 B3KVY2;Q8NAK9;B3KUY1;Q53FN0;A0A024R8U5;Q01130;B3KX15;J3QL05;J3KP15;Q6NXQ0;Q8N220;B3KUF7 B3KVY2 18 32 SFRS2;SRSF2 Serine/arginine-rich splicing factor 2 yes no 3 0.001283 43.598 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2887 106 3158 4760 7688 7688 157;1795;1796 0 VDSLEFSLESQK EADQSPKNSAILQNRVDSLEFSLESQKQMN QNRVDSLEFSLESQKQMNSDLQKQCEELVQ R V D Q K Q 0 0 0 1 0 1 2 0 0 0 2 1 0 1 0 3 0 0 0 1 0 0 12 0 1380.6773 P49454 P49454 832 843 CENPF Centromere protein F yes yes 2 0.006858 41.56 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2888 768 3159 4761 7689 7689 1242 0 VDSLLENLEK DLQAIKKELTQIKQKVDSLLENLEKIEKEQ QIKQKVDSLLENLEKIEKEQSKQAAGVDQG K V D E K I 0 0 1 1 0 0 2 0 0 0 3 1 0 0 0 1 0 0 0 1 0 0 10 0 1158.6132 G3V576;G3V4W0;B4DY08;B2R5W2;G3V4C1;B2R603;G3V2Q1;A8K9A4;P07910;G3V5V7;B4DQQ2;G3V2D6;Q6PKD2;A0A0G2JPF8;A0A0G2JNQ3;P0DMR1;O60812;B7ZW38;B2RXH8 G3V576 207 216 HNRNPC;HNRPCL1;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 yes no 2 0.0092721 61.78 1 0.87372 1.1118 NaN 1 Median NaN NaN NaN 0 0 Median 0.87372 1.1118 NaN 1 0 Median 7612600 4028200 3584400 0 0 0 7612600 4028200 3584400 2889 378 3160 4762 7690;7691 7690 2 VEDSTMPIRR IVGAQLIHADKLGEKVEDSTMPIRRTVNST KLGEKVEDSTMPIRRTVNSTRETPPKSKLA K V E R R T 0 2 0 1 0 0 1 0 0 1 0 0 1 0 1 1 1 0 0 1 0 0 10 1 1202.6078 Q5SSJ5;X6RGJ2;B0QZK9;B0QZK8 Q5SSJ5 34 43 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 3 0.0029015 43.282 1 0.29148 0.5075 NaN 1 Median NaN NaN NaN 0 0 Median 0.29148 0.5075 NaN 1 0 Median 57539000 43736000 13803000 0 0 0 57539000 43736000 13803000 2890 842 3161 4763 7692;7693 7693 199 2 VEEISPNIR ASAFTEEQAVLYNQRVEEISPNIRYCAYNI VLYNQRVEEISPNIRYCAYNIGDQSAINEL R V E I R Y 0 1 1 0 0 0 2 0 0 2 0 0 0 0 1 1 0 0 0 1 0 0 9 0 1055.5611 B3KMI9;B4DVI7;Q9UHB9 B3KMI9 237 245 SRP68 Signal recognition particle subunit SRP68 yes no 2 0.00033389 73.887 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2891 429 3162 4764 7694 7694 634 0 VEETSPLGNAR DNMEICTPDRSSPAKVEETSPLGNARLDTP SPAKVEETSPLGNARLDTPDINIVLKQDMA K V E A R L 1 1 1 0 0 0 2 1 0 0 1 0 0 0 1 1 1 0 0 1 0 0 11 0 1171.5833 Q6M1B8;A0A087WYW3;A0A024R2N6;P30414 Q6M1B8 842 852 DKFZp686J06106;NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase yes no 2 0.028799 44.543 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2892 49 3163 4765 7695 7695 51 0 VEEVLEEEEEEYVVEK ______________________________ EEVLEEEEEEYVVEKVLDRRVVKGKVEYLL K V E E K V 0 0 0 0 0 0 9 0 0 0 1 1 0 0 0 0 0 0 1 4 0 0 16 0 1979.9099 C9JWS9;K7ELA4;B5MD17;J3KS05;Q6IBN6;P83916 C9JWS9 10 25 CBX1 Chromobox protein homolog 1 yes no 2 0.022775 28.327 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 4177800 4177800 0 0 0 0 4177800 4177800 0 2893 533 3164 4766 7696;7697 7696 2 VEHHDHAVVSGR GDAACFYDIKLGRRRVEHHDHAVVSGRLAG RRRVEHHDHAVVSGRLAGENMTGAAKPYWH R V E G R L 1 1 0 1 0 0 1 1 3 0 0 0 0 0 0 1 0 0 0 3 0 0 12 0 1341.6538 A0A140VK04;E9PMA0;O95831 A0A140VK04 100 111 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes no 3 0.00068842 63.76 1 0.60259 0.76276 NaN 1 Median 0.60259 0.76276 NaN 1 0 Median NaN NaN NaN 0 0 Median 5083700 3284300 1799400 5083700 3284300 1799400 0 0 0 2894 281 3165 4767 7698 7698 1 VEILANDQGNR LGTTYSCVGVFQQGRVEILANDQGNRTTPS QQGRVEILANDQGNRTTPSYVAFTDTERLV R V E N R T 1 1 2 1 0 1 1 1 0 1 1 0 0 0 0 0 0 0 0 1 0 0 11 0 1227.6208 Q53FC7;B3KSM6;B2R6X5;P48741;P17066 Q53FC7 28 38 HSPA7;HSPA6 Putative heat shock 70 kDa protein 7;Heat shock 70 kDa protein 6 yes no 2 6.1164E-06 77.677 1 1 0.90536 1.1683 56.57 2 Median 0.61103 0.78315 NaN 1 0 Median 1.3415 1.743 NaN 1 0 Median 20950000 10687000 10263000 7461700 4705200 2756500 13489000 5982000 7506600 2895 405 3166 4768;4769 7699;7700;7701;7702 7699 3 VEILNEHR GCGRLNEPIKVLCRRVEILNEHRGEKLNRV IKVLCRRVEILNEHRGEKLNRVKMVEKEKD R V E H R G 0 1 1 0 0 0 2 0 1 1 1 0 0 0 0 0 0 0 0 1 0 0 8 0 1008.5352 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83 Q9NTJ3 274 281 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 2;3 0.0040109 55.37 2 0.63448 0.81901 NaN 1 Median NaN NaN NaN 0 0 Median 0.63448 0.81901 NaN 1 0 Median 17701000 9333300 8368100 0 0 0 17701000 9333300 8368100 2896 941 3167 4770;4771 7703;7704 7703 2 VEILNEHRGEK GCGRLNEPIKVLCRRVEILNEHRGEKLNRV LCRRVEILNEHRGEKLNRVKMVEKEKDALE R V E E K L 0 1 1 0 0 0 3 1 1 1 1 1 0 0 0 0 0 0 0 1 0 0 11 1 1322.6943 Q9NTJ3;E9PD53;B3KXX5;Q6NSG3;Q58F29;Q6P169;C9JR83 Q9NTJ3 274 284 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 3 0.00098364 80.979 1 0.57495 0.88208 NaN 1 Median NaN NaN NaN 0 0 Median 0.57495 0.88208 NaN 1 0 Median 32802000 19346000 13456000 0 0 0 32802000 19346000 13456000 2897 941 3168 4772 7705;7706 7705 2 VELCSFSGYK ______________________________ ______________________________ K V E Y K I 0 0 0 0 1 0 1 1 0 0 1 1 0 1 0 2 0 0 1 1 0 0 10 0 1188.5485 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 3 12 RPL24;HEL-S-310 60S ribosomal protein L24 yes no 2 0.010106 47.198 1 1.0926 1.2711 NaN 1 Median 1.0926 1.2711 NaN 1 0 Median NaN NaN NaN 0 0 Median 2540900 1149000 1391900 2540900 1149000 1391900 0 0 0 2898 563 3169 4773 7707;7708 7707 2 VELQELNDR DAINTEFKNTRTNEKVELQELNDRFANYID TRTNEKVELQELNDRFANYIDKVRFLEQQN K V E D R F 0 1 1 1 0 1 2 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 9 0 1114.5619 V9HWE1;P08670;Q53HU8;B0YJC4;B3KRK8;A0A1B0GTT5;A0A1B0GUA0;Q9H319;Q53SB5;Q45VM8;Q45VM7;Q45VM6;L7RDA5;A5Z217;P17661;B4DUI0 V9HWE1 105 113 HEL113;VIM;tmp_locus_29;DES Vimentin;Desmin yes no 2 0.0057688 59.245 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 5637200 5637200 0 2544400 2544400 0 3092700 3092700 0 2899 731 3170 4774;4775 7709;7710 7709 2 VELSQLR GKKKEELLKQLDDLKVELSQLRVAKVTGGA LKQLDDLKVELSQLRVAKVTGGAASKLSKI K V E L R V 0 1 0 0 0 1 1 0 0 0 2 0 0 0 0 1 0 0 0 1 0 0 7 0 843.48142 P42766;F2Z388;A0A024R866;A4D2M5 P42766 26 32 RPL35;LOC154880 60S ribosomal protein L35 no no 2 3.9273E-15 114.02 1 0.7845 1.0063 NaN 1 Median 0.7845 1.0063 NaN 1 0 Median NaN NaN NaN 0 0 Median 7592600 4751300 2841300 7592600 4751300 2841300 0 0 0 2900 760;314 3171 4776 7711;7712 7711 2 VEPADSVESSPPSITHSPQNELK KGPNNTANSSEIKVKVEPADSVESSPPSIT SSPPSITHSPQNELKGTNHSNEKKNTPAAQ K V E L K G 1 0 1 1 0 1 3 0 1 1 1 1 0 0 4 5 1 0 0 2 0 0 23 0 2447.1816 B7Z4V7;Q2TB10 B7Z4V7 313 335 ZNF800 Zinc finger protein 800 yes no 3 6.5249E-39 115.66 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2901 539 3172 4777;4778 7713;7714 7713 780;781;782 0 VEPEVLSTDTQTSPEPGTR SLMGVQMPNLDLKEKVEPEVLSTDTQTSPE VLSTDTQTSPEPGTRMNILPKRTRRVKTQS K V E T R M 0 1 0 1 0 1 3 1 0 0 1 0 0 0 3 2 4 0 0 2 0 0 19 0 2041.9804 P29375;B4DVM9 P29375 192 210 KDM5A Lysine-specific demethylase 5A yes no 2 2.2478E-07 61.096 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2902 751 3173 4779 7715;7716 7716 1169 0 VEQATKPSFESGR ARDMNGKSLDGKAIKVEQATKPSFESGRRG IKVEQATKPSFESGRRGPPPPPRSRGPPRG K V E G R R 1 1 0 0 0 1 2 1 0 0 0 1 0 1 1 2 1 0 0 1 0 0 13 1 1434.7103 B4E352;P38159;H0Y6E7;H3BT71 B4E352 42 54 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed yes no 3 0.00021009 76.588 1 0.25507 0.37583 NaN 1 Median NaN NaN NaN 0 0 Median 0.25507 0.37583 NaN 1 0 Median 21243000 16804000 4438800 0 0 0 21243000 16804000 4438800 2903 522 3174 4780 7717;7718 7718 2 VEQLAR RNQLLNVDLTKDSKRVEQLAREKVYLCQKL VDLTKDSKRVEQLAREKVYLCQKLKGLEAE R V E A R E 1 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 6 0 714.40244 Q3B787;F8VYN8;A0A0A0MS84;A0A024RBD4;J3KNW7;Q9Y592 Q3B787 81 86 CCDC41;CEP83 Centrosomal protein of 83 kDa yes no 2 0.0011261 78.156 3 0.69145 0.86185 3.6192 2 Median 0.69145 0.86185 3.6192 2 0 Median NaN NaN NaN 0 0 Median 85187000 50442000 34745000 85187000 50442000 34745000 0 0 0 2904 140 3175 4781;4782;4783 7719;7720;7721 7721 3 VERADGYEPPVQESV GSSSGKATGDETGAKVERADGYEPPVQESV VERADGYEPPVQESV_______________ K V E S V - 1 1 0 1 0 1 3 1 0 0 0 0 0 0 2 1 0 0 1 3 0 0 15 1 1673.7897 D6R9B6;H0Y9Y4;D6RAT0;Q6NXR8;P61247 D6R9B6 131 145 RPS3A 40S ribosomal protein S3a yes no 2 0.0073465 44.925 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2905 594 3176 4784 7722 7722 888 0 VESLESLYFTPIPAR PGEPASPISQRLPPKVESLESLYFTPIPAR VESLESLYFTPIPARSQAPLESSLDSLGDV K V E A R S 1 1 0 0 0 0 2 0 0 1 2 0 0 1 2 2 1 0 1 1 0 0 15 0 1720.9036 A0A087WY61;A0A024R5M9;Q4LE64;Q14980;Q59HB8;Q96HN5;H0YFY6;Q7Z757 A0A087WY61 1751 1765 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 yes no 2 7.0819E-07 83.729 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2906 71 3177;3178;3179 4785;4786;4787 7723;7724;7725;7726;7727;7728 7726 88;89;1787 0 VETFSGVYK KVHLDKAQQNNVEHKVETFSGVYKKLTGKD NNVEHKVETFSGVYKKLTGKDVNFEFPEFQ K V E Y K K 0 0 0 0 0 0 1 1 0 0 0 1 0 1 0 1 1 0 1 2 0 0 9 0 1028.5179 P62081 P62081 170 178 RPS7 40S ribosomal protein S7 yes yes 2 0.0020568 68.224 1 0.39566 0.52284 NaN 1 Median NaN NaN NaN 0 0 Median 0.39566 0.52284 NaN 1 0 Median 13508000 9467700 4039900 0 0 0 13508000 9467700 4039900 2907 784 3180 4788 7729 7729 1 VETFSGVYKK KVHLDKAQQNNVEHKVETFSGVYKKLTGKD NVEHKVETFSGVYKKLTGKDVNFEFPEFQL K V E K K L 0 0 0 0 0 0 1 1 0 0 0 2 0 1 0 1 1 0 1 2 0 0 10 1 1156.6128 P62081 P62081 170 179 RPS7 40S ribosomal protein S7 yes yes 2 0.010082 51.949 1 0.37768 0.46348 NaN 1 Median NaN NaN NaN 0 0 Median 0.37768 0.46348 NaN 1 0 Median 9197800 7061100 2136700 0 0 0 9197800 7061100 2136700 2908 784 3181 4789 7730 7730 1 VETLSPESALQGSPR IKSEAASPALPVITKVETLSPESALQGSPR VETLSPESALQGSPRSAASTPAGSPDGSLP K V E P R S 1 1 0 0 0 1 2 1 0 0 2 0 0 0 2 3 1 0 0 1 0 0 15 0 1569.7999 I6ZZT5;Q99958 I6ZZT5 57 71 FOXC2 Forkhead box protein C2 yes no 2 9.1292E-09 93.495 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2909 678 3182 4790;4791 7731;7732 7731 1007;1008 0 VETSEHFR TRESTRGSRRTPRKRVETSEHFRIDGPVIS RRTPRKRVETSEHFRIDGPVISESTPIAET R V E F R I 0 1 0 0 0 0 2 0 1 0 0 0 0 1 0 1 1 0 0 1 0 0 8 0 1003.4723 A0A024RBE7;P42167 A0A024RBE7 262 269 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes no 3 0.013657 39.022 1 0.31193 0.41168 NaN 1 Median NaN NaN NaN 0 0 Median 0.31193 0.41168 NaN 1 0 Median 5981200 4484800 1496400 0 0 0 5981200 4484800 1496400 2910 141 3183 4792 7733 7733 1 VETVSQPSESPKDTIDK CSENNMPSSDLADEKVETVSQPSESPKDTI TVSQPSESPKDTIDKTKKPRTRRSRFHSPS K V E D K T 0 0 0 2 0 1 2 0 0 1 0 2 0 0 2 3 2 0 0 2 0 0 17 1 1858.916 Q05BS8;A0A0A0MTP7;B4DZM2;B2RA91;F8VXG7;Q99590 Q05BS8 664 680 SFRS2IP;SCAF11 Protein SCAF11 yes no 2;3 4.8578E-05 44.299 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2911 229 3184 4793;4794 7734;7735 7734 323;324 0 VEVNTNSGEIIHK QPSKLVKRGPGRKPKVEVNTNSGEIIHKKR PKVEVNTNSGEIIHKKRGRKPKKLQYAKPE K V E H K K 0 0 2 0 0 0 2 1 1 2 0 1 0 0 0 1 1 0 0 2 0 0 13 0 1438.7416 Q8WWQ0;Q9NWP3 Q8WWQ0 1645 1657 PHIP PH-interacting protein yes no 2;3 2.6781E-05 90.759 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2912 894 3185 4795;4796;4797;4798 7736;7737;7738;7739 7736 1510 0 VEVNTNSGEIIHKK QPSKLVKRGPGRKPKVEVNTNSGEIIHKKR KVEVNTNSGEIIHKKRGRKPKKLQYAKPED K V E K K R 0 0 2 0 0 0 2 1 1 2 0 2 0 0 0 1 1 0 0 2 0 0 14 1 1566.8366 Q8WWQ0;Q9NWP3 Q8WWQ0 1645 1658 PHIP PH-interacting protein yes no 3 1.2615E-05 74.428 2 0.90353 1.0845 NaN 1 Median 0.90353 1.0845 NaN 1 0 Median NaN NaN NaN 0 0 Median 2679400 1473600 1205700 2679400 1473600 1205700 0 0 0 2913 894 3186;3187 4799;4800 7740;7741 7740 1510 1 VEYISSPLK PNAQKPFAHYQRHCRVEYISSPLKSHPLRE YQRHCRVEYISSPLKSHPLRELKKSKGGKR R V E L K S 0 0 0 0 0 0 1 0 0 1 1 1 0 0 1 2 0 0 1 1 0 0 9 0 1034.5648 Q15697 Q15697 282 290 ZNF174 Zinc finger protein 174 yes yes 2 0.0019765 61.65 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2914 824 3188 4801 7742;7743 7743 1363 0 VFCVEEEDSESSLQK KLLEKTNLEKEKGSRVFCVEEEDSESSLQK VFCVEEEDSESSLQKRRRKKKKKHHLQPEN R V F Q K R 0 0 0 1 1 1 4 0 0 0 1 1 0 1 0 3 0 0 0 2 0 0 15 0 1784.7775 Q14684 Q14684 384 398 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 2 7.8502E-13 99.991 2 2 0.97447 1.1825 NaN 1 Median 0.97447 1.1825 NaN 1 0 Median NaN NaN NaN 0 0 Median 10661000 5692800 4968600 10661000 5692800 4968600 0 0 0 2915 815 3189;3190 4802;4803;4804;4805 7744;7745;7746;7747;7748;7749 7746 1344 2 VFDDESDEKEDEEYADEK EDSDEKEEEEDTYEKVFDDESDEKEDEEYA DESDEKEDEEYADEKGLEAADKKAEEGDAD K V F E K G 1 0 0 5 0 0 6 0 0 0 0 2 0 1 0 1 0 0 1 1 0 0 18 1 2190.8601 O43719 O43719 637 654 HTATSF1 HIV Tat-specific factor 1 yes yes 2;3 8.9958E-47 96.666 3 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2916 702 3191 4806;4807;4808;4809 7750;7751;7752;7753 7752 1039 0 VFDLQFSTDSPR QNDDEKERLQRRRSRVFDLQFSTDSPRLLA RSRVFDLQFSTDSPRLLASPSSRSIDISAT R V F P R L 0 1 0 2 0 1 0 0 0 0 1 0 0 2 1 2 1 0 0 1 0 0 12 0 1410.6779 B4DRG7;E9PHA2;A8K4T8;Q15003;C9J470;C9JZP1 B4DRG7 48 59 NCAPH Condensin complex subunit 2 yes no 2 0 225.09 4 8 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2917 354 3192;3193 4810;4811;4812;4813;4814;4815;4816;4817;4818;4819;4820;4821 7754;7755;7756;7757;7758;7759;7760;7761;7762;7763;7764;7765;7766;7767;7768;7769;7770;7771;7772;7773;7774;7775;7776;7777;7778;7779;7780;7781;7782;7783;7784;7785 7764 543;544;1852 0 VFIDQNLSPGK MAKDAGLIEANGELKVFIDQNLSPGKGVVS GELKVFIDQNLSPGKGVVSLVAVHPSTVNP K V F G K G 0 0 1 1 0 1 0 1 0 1 1 1 0 1 1 1 0 0 0 1 0 0 11 0 1216.6452 F5H452;Q5JSB6;Q5JSB5;A0A024RDY4;Q14186 F5H452 16 26 TFDP1 Transcription factor Dp-1 yes no 2 2.5627E-20 115.14 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2918 172 3194 4822;4823 7786;7787;7788;7789 7787 233 0 VFLENVIR RISGLIYEETRGVLKVFLENVIRDAVTYTE ETRGVLKVFLENVIRDAVTYTEHAKRKTVT K V F I R D 0 1 1 0 0 0 1 0 0 1 1 0 0 1 0 0 0 0 0 2 0 0 8 0 988.57057 B2R4R0;P62805;Q0VAS5;Q6B823 B2R4R0 61 68 HIST1H4H;HIST1H4A Histone H4 yes no 2 2.4676E-19 119.57 1 1 0.62436 0.84177 0.1546 2 Median 0.68057 0.84269 NaN 1 0 Median 0.57279 0.84085 NaN 1 0 Median 394180000 249780000 144390000 49368000 28158000 21210000 344810000 221630000 123180000 2919 400 3195 4824;4825 7790;7791;7792;7793;7794;7795;7796 7794 7 VFLENVIRDAVTYTEHAK RISGLIYEETRGVLKVFLENVIRDAVTYTE ENVIRDAVTYTEHAKRKTVTAMDVVYALKR K V F A K R 2 1 1 1 0 0 2 0 1 1 1 1 0 1 0 0 2 0 1 3 0 0 18 1 2104.0953 B2R4R0;P62805;Q0VAS5 B2R4R0 61 78 HIST1H4H;HIST1H4A Histone H4 yes no 3;4 5.5866E-41 124.26 2 0.82452 1.2877 1.1911 2 Median NaN NaN NaN 0 0 Median 0.82452 1.2877 1.1911 2 0 Median 144480000 77377000 67107000 0 0 0 144480000 77377000 67107000 2920 400 3196 4826;4827 7797;7798;7799 7797 3 VFPGSTTEDYNLIVIER LDLDLTADSQPPVFKVFPGSTTEDYNLIVI PGSTTEDYNLIVIERGAAAAATGQPGTAPA K V F E R G 0 1 1 1 0 0 2 1 0 2 1 0 0 1 1 1 2 0 1 2 0 0 17 0 1951.9891 B2R8R5;Q13263;M0R0K9 B2R8R5 508 524 TRIM28 Transcription intermediary factor 1-beta yes no 2 0.0028671 35.803 1 1.8697 2.4952 NaN 1 Median NaN NaN NaN 0 0 Median 1.8697 2.4952 NaN 1 0 Median 7150900 2983000 4167900 0 0 0 7150900 2983000 4167900 2921 408 3197 4828 7800 7800 1 VFQFLNAK IYPGHGRRYARTDGKVFQFLNAKCESAFLS YARTDGKVFQFLNAKCESAFLSKRNPRQIN K V F A K C 1 0 1 0 0 1 0 0 0 0 1 1 0 2 0 0 0 0 0 1 0 0 8 0 965.53345 C9JXB8;C9JNW5;V9HW01;P83731 C9JXB8 28 35 RPL24;HEL-S-310 60S ribosomal protein L24 yes no 2 1.1903E-27 126.24 1 0.47366 0.60724 NaN 1 Median NaN NaN NaN 0 0 Median 0.47366 0.60724 NaN 1 0 Median 17657000 11345000 6312000 0 0 0 17657000 11345000 6312000 2922 563 3198 4829 7801 7801 1 VFTSWTGGGAAASR SCSATGTNRSDQYGRVFTSWTGGGAAASRL RVFTSWTGGGAAASRLSDWLDPASTGAQFI R V F S R L 3 1 0 0 0 0 0 3 0 0 0 0 0 1 0 2 2 1 0 1 0 0 14 0 1366.663 CON__P15636 CON__P15636 435 448 yes yes 2 0.00094392 49.448 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 52064000 52064000 0 0 0 0 52064000 52064000 0 + 2923 581 3199 4830;4831 7802;7803 7802 2 VGDGDLSAEEIPENEVSLR SPFVPEETMEEQKTKVGDGDLSAEEIPENE DLSAEEIPENEVSLRRAVSKKKTALGKNHS K V G L R R 1 1 1 2 0 0 4 2 0 1 2 0 0 0 1 2 0 0 0 2 0 0 19 0 2027.9647 Q14684;Q6PJM8 Q14684 239 257 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 2 4.6369E-66 141.13 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2924 815 3200 4832;4833 7804;7805;7806 7805 1345 0 VGDGDLSAEEIPENEVSLRR SPFVPEETMEEQKTKVGDGDLSAEEIPENE LSAEEIPENEVSLRRAVSKKKTALGKNHSR K V G R R A 1 2 1 2 0 0 4 2 0 1 2 0 0 0 1 2 0 0 0 2 0 0 20 1 2184.0659 Q14684;Q6PJM8 Q14684 239 258 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 3 2.5451E-60 131.26 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2925 815 3201 4834 7807 7807 1345 0 VGDTSLDPNDFDFTVTGR KAFRSKVELIAYFEKVGDTSLDPNDFDFTV TSLDPNDFDFTVTGRGSPSRREQKPPKKPK K V G G R G 0 1 1 4 0 0 0 2 0 0 1 0 0 2 1 1 3 0 0 2 0 0 18 0 1954.8909 A0A075BPP5;I6LM39;D6QZ43;A0A087X1U4;C6KG44;E1B2J3;E9LUH3;D9ZNA4;D5L9I5;D3YJ43;D0UU70;A8K079;A0A140VKC4;E9LUH4;P51608;A0A087WVW7 A0A075BPP5 19 36 MECP2 Methyl-CpG-binding protein 2 yes no 2 0.0005748 42.209 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2926 178 3202 4835 7808 7808 245;1806 0 VGGHAAEYGAEALER LSAADKGNVKAAWGKVGGHAAEYGAEALER VGGHAAEYGAEALERMFLSFPTTKTYFPHF K V G E R M 4 1 0 0 0 0 3 3 1 0 1 0 0 0 0 0 0 0 1 1 0 0 15 0 1528.727 CON__P01966 CON__P01966 18 32 yes yes 3 0.0019301 40.237 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 5465100 5465100 0 0 0 0 5465100 5465100 0 + 2927 570 3203 4836 7809 7809 1 VGGSDEEASGIPSR EAHRKKSLEGMKKARVGGSDEEASGIPSRT RVGGSDEEASGIPSRTASLELDLFPEAKQK R V G S R T 1 1 0 1 0 0 2 3 0 1 0 0 0 0 1 3 0 0 0 1 0 0 14 0 1359.6266 H7C446;A8MV53;A0A0A6YYI3;A0A0B4J1V8;Q9NQ55 H7C446 116 129 PPAN;PPAN-P2RY11 Suppressor of SWI4 1 homolog yes no 2 2.1283E-85 155.56 1 3 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2928 675 3204 4837;4838;4839;4840 7810;7811;7812;7813;7814;7815;7816;7817;7818;7819;7820 7815 1000 0 VGMADANSPPKPLSK GRLENGNQARSEARRVGMADANSPPKPLSK VGMADANSPPKPLSKPRTPRRSKSDGEAKP R V G S K P 2 0 1 1 0 0 0 1 0 0 1 2 1 0 3 2 0 0 0 1 0 0 15 1 1510.7814 Q59FP7;A0A024R7E3;P26358;K7EJL0 Q59FP7 107 121 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 yes no 2;3 8.9565E-07 81.713 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2929 91 3205 4841;4842 7821;7822;7823 7821 17 128 0 VGSPATVTFQQNK SGSVTTGTKMVLTTKVGSPATVTFQQNKNF TKVGSPATVTFQQNKNFHQTFATWVKQGQS K V G N K N 1 0 1 0 0 2 0 1 0 0 0 1 0 1 1 1 2 0 0 2 0 0 13 0 1375.7096 F5GXF5;E7ETD6;Q12830;J3QQK4 F5GXF5 2033 2045 BPTF Nucleosome-remodeling factor subunit BPTF yes no 2 5.527E-103 163.51 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2930 607 3206 4843;4844 7824;7825;7826;7827;7828;7829 7825 911 0 VHELNEEIGK TQEEISAEVSAKAEKVHELNEEIGKLLAKA AKAEKVHELNEEIGKLLAKAEQLGAEGNVD K V H G K L 0 0 1 0 0 0 3 1 1 1 1 1 0 0 0 0 0 0 0 1 0 0 10 0 1166.5932 B8ZZ09;B8ZZ10;A8MYV2;D3DU41;Q1W6G4;B3KRR1;Q53G47;B3KSL5;A0A0A6YYJ8;Q9NQ29;Q9Y383 B8ZZ09 40 49 LUC7L;LUC7L2 Putative RNA-binding protein Luc7-like 1;Putative RNA-binding protein Luc7-like 2 yes no 2 0.0059565 64.841 1 0.6868 0.85959 NaN 1 Median NaN NaN NaN 0 0 Median 0.6868 0.85959 NaN 1 0 Median 10007000 5552500 4454700 0 0 0 10007000 5552500 4454700 2931 232 3207 4845 7830 7830 1 VHFEESSK FYRDIISIAEDEDLRVHFEESSKLEDLLRK AEDEDLRVHFEESSKLEDLLRKVRAKETRK R V H S K L 0 0 0 0 0 0 2 0 1 0 0 1 0 1 0 2 0 0 0 1 0 0 8 0 961.45051 B4DE32;B1AHC9;A0A024R1N4;P12956;B4E356;B2RDN9 B4DE32 181 188 XRCC6 X-ray repair cross-complementing protein 6 yes no 2 0.0045615 86.833 1 0.60972 0.76232 NaN 1 Median NaN NaN NaN 0 0 Median 0.60972 0.76232 NaN 1 0 Median 20833000 12454000 8379300 0 0 0 20833000 12454000 8379300 2932 33 3208 4846 7831;7832 7832 2 VHGEPTSDLSDID AVRIAFDRAMNHLSRVHGEPTSDLSDID__ SRVHGEPTSDLSDID_______________ R V H I D - 0 0 0 3 0 0 1 1 1 1 1 0 0 0 1 2 1 0 0 1 0 0 13 0 1383.6154 Q86X06;A0A024R4V5;Q9Y4Q3;B7Z926;A0A024R4W4;O95696;B4DZC2;B4DZ41;Q659H0;Q5CZ83 Q86X06 1177 1189 BRD1;DKFZp434B094;DKFZp586E1619;DKFZp686F0325 Bromodomain-containing protein 1 yes no 2 1.8167E-142 163.59 3 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2933 64 3209;3210 4847;4848;4849;4850;4851 7833;7834;7835;7836;7837;7838 7835 73;74;1785 0 VHIEIGPDGR ENDIYNFFSPLNPVRVHIEIGPDGRVTGEA LNPVRVHIEIGPDGRVTGEADVEFATHEDA R V H G R V 0 1 0 1 0 0 1 2 1 2 0 0 0 0 1 0 0 0 0 1 0 0 10 0 1091.5724 E9PCY7;G8JLB6;P31943;Q68DG4;H0YB39;B4DP51;H0YBG7;H0YBD7;P55795;B4DP00;B4DFK9;A0A024R7T3;P52597;B4DKS8 E9PCY7 317 326 HNRNPH1;DKFZp686A15170;HNRNPH2;HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2;Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed no no 2;3 0.0018474 91.867 2 2.8582 3.7324 1.0355 2 Median NaN NaN NaN 0 0 Median 2.8582 3.7324 1.0355 2 0 Median 29578000 8942900 20635000 0 0 0 29578000 8942900 20635000 2934 614;780;95 3211 4852;4853 7839;7840;7841;7842 7839 4 VHLLGR SETTTSLVLERSLNRVHLLGRVGQDPVLRQ LVLERSLNRVHLLGRVGQDPVLRQVEGKNP R V H G R V 0 1 0 0 0 0 0 1 1 0 2 0 0 0 0 0 0 0 0 1 0 0 6 0 693.42859 C9K0U8;A0A0G2JLD8;E7EUY5;Q567R6;A4D1U3;B7Z268;Q04837 C9K0U8 33 38 SSBP1 Single-stranded DNA-binding protein;Single-stranded DNA-binding protein, mitochondrial yes no 2 1.4394E-17 120.78 1 1.0286 1.4099 NaN 1 Median NaN NaN NaN 0 0 Median 1.0286 1.4099 NaN 1 0 Median 44515000 22547000 21968000 0 0 0 44515000 22547000 21968000 2935 257 3212 4854 7843 7843 1 VHPAVVIR VMATVKKGKPELRKKVHPAVVIRQRKSYRR KPELRKKVHPAVVIRQRKSYRRKDGVFLYF K V H I R Q 1 1 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 3 0 0 8 0 889.54977 J3KTJ3;J3KT29;Q9BTQ7;A0A024R1Q8;P62829;J3QQT9;C9JD32 J3KTJ3 17 24 RPL23 60S ribosomal protein L23 yes no 2 0.020023 55.441 2 0.61528 0.8276 7.6793 2 Median NaN NaN NaN 0 0 Median 0.61528 0.8276 7.6793 2 0 Median 51900000 30556000 21344000 0 0 0 51900000 30556000 21344000 2936 34 3213 4855;4856 7844;7845;7846 7846 3 VHVPARPYR NSPCTIIIGKAHTEKVHVPARPYRVLNNFI KAHTEKVHVPARPYRVLNNFISNQKMDFKE K V H Y R V 1 2 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 0 1 2 0 0 9 1 1093.6145 P46013;Q70L73 P46013 727 735 MKI67 Antigen KI-67 no no 3 0.0022605 51.346 1 1 0.87178 1.2876 19.444 2 Median 0.86563 1.1222 NaN 1 0 Median 0.87796 1.4774 NaN 1 0 Median 40525000 23473000 17052000 17562000 10824000 6737700 22963000 12649000 10314000 2937 762;865 3214 4857;4858 7847;7848;7849 7849 3 VHVQFFDDSPTR PFDGTFIREKGKSVRVHVQFFDDSPTRGWV SVRVHVQFFDDSPTRGWVSKRLLKP_____ R V H T R G 0 1 0 2 0 1 0 0 1 0 0 0 0 2 1 1 1 0 0 2 0 0 12 0 1446.6892 U3KQ72;C9JH55;C9J8Y8;C9J7Y7;F8WAX8;Q3SWU9;A0A087WWJ1;Q1L838;P52701 U3KQ72 30 41 MSH6;GTBP DNA mismatch repair protein Msh6 yes no 2 4.2302E-66 147.35 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2938 191 3215 4859;4860 7850;7851;7852;7853 7850 277 0 VIHEQVNHR MYLKDKLDETGNSLKVIHEQVNHRWEVCLT TGNSLKVIHEQVNHRWEVCLTMSEKGFQQI K V I H R W 0 1 1 0 0 1 1 0 2 1 0 0 0 0 0 0 0 0 0 2 0 0 9 0 1130.5945 P11388 P11388 288 296 TOP2A DNA topoisomerase 2-alpha yes yes 3 9.7479E-09 99.802 4 1 0.76642 0.9724 14.061 3 Median 0.84764 1.0757 14.284 2 0 Median 0.65309 0.90808 NaN 1 0 Median 90117000 50884000 39233000 21837000 10267000 11570000 68280000 40617000 27663000 2939 734 3216 4861;4862;4863;4864;4865 7854;7855;7856;7857;7858;7859;7860;7861;7862;7863 7857 10 VILASPETSSAK QQFILTSPDGAGTGKVILASPETSSAKQLI TGKVILASPETSSAKQLIFTTSDNLVPGRI K V I A K Q 2 0 0 0 0 0 1 0 0 1 1 1 0 0 1 3 1 0 0 1 0 0 12 0 1201.6554 C9JKS0;F2YGU2;P49116;Q6PHZ7 C9JKS0 83 94 NR2C2 Nuclear receptor subfamily 2 group C member 2 yes no 2 0.0061128 42.789 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2940 562 3217 4866 7864 7864 847 0 VIPLDRDNK ECRMIGLRLYDGLFKVIPLDRDNKELKAFN YDGLFKVIPLDRDNKELKAFNIRLEELHVI K V I N K E 0 1 1 2 0 0 0 0 0 1 1 1 0 0 1 0 0 0 0 1 0 0 9 1 1068.5928 Q16531;F5GY55;B7Z2A1;F5GWI0;F5H2L3 Q16531 142 150 DDB1 DNA damage-binding protein 1 yes no 3 0.019922 35.908 1 0.69784 0.99273 NaN 1 Median NaN NaN NaN 0 0 Median 0.69784 0.99273 NaN 1 0 Median 16295000 8915300 7379200 0 0 0 16295000 8915300 7379200 2941 827 3218 4867 7865 7865 1 VIQENEHALQK PEIQKEHRNLLQELKVIQENEHALQKDALS QELKVIQENEHALQKDALSIKLKLEQIDGH K V I Q K D 1 0 1 0 0 2 2 0 1 1 1 1 0 0 0 0 0 0 0 1 0 0 11 0 1307.6834 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 Q9NTJ3 999 1009 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 2;3 9.1831E-20 123.51 2 0.63917 0.80648 10.599 2 Median NaN NaN NaN 0 0 Median 0.63917 0.80648 10.599 2 0 Median 81133000 49251000 31882000 0 0 0 81133000 49251000 31882000 2942 941 3219 4868;4869 7866;7867;7868 7868 3 VIQVDEMIVEEEEEEENERK AEAIQTPLKSAKTRKVIQVDEMIVEEEEEE EMIVEEEEEEENERKNLQTARVKRCPPSKK K V I R K N 0 1 1 1 0 1 9 0 0 2 0 1 1 0 0 0 0 0 0 3 0 0 20 1 2475.1323 Q53HL2;A8K7A2;B4DXT3 Q53HL2 116 135 CDCA8 Borealin yes no 3 9.369E-11 60.034 2 0.67797 1.0438 10.673 2 Median NaN NaN NaN 0 0 Median 0.67797 1.0438 10.673 2 0 Median 77343000 47265000 30079000 0 0 0 77343000 47265000 30079000 2943 837 3220 4870;4871 7869;7870;7871 7869 198 3 VKASPITNDGEDEFVPSDGLDKDEYTFSPGK ADDDDDDNNDLEELKVKASPITNDGEDEFV SDGLDKDEYTFSPGKSKATPEKSLHDKKSQ K V K G K S 1 0 1 5 0 0 3 3 0 1 1 3 0 2 3 3 2 0 1 2 0 0 31 2 3356.5572 Q02880;Q71UH4;Q59H80;B4DLV2;Q8WTY5;B7ZB27 Q02880 1397 1427 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 3 1.8922E-61 93.64 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2944 796 3221;3222 4872;4873 7872;7873 7873 1269;1270;1271 0 VKDEPQRR PKRKAEGDAKGDKAKVKDEPQRRSARLSAK AKGDKAKVKDEPQRRSARLSAKPAPPKPEP K V K R R S 0 2 0 1 0 1 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 8 2 1026.557 P05204;A0A024R046;O00479 P05204 17 24 HMGN2;HMGN4 Non-histone chromosomal protein HMG-17;High mobility group nucleosome-binding domain-containing protein 4 no no 3 0.0043676 53.166 1 0.3926 0.53408 NaN 1 Median NaN NaN NaN 0 0 Median 0.3926 0.53408 NaN 1 0 Median 26563000 18072000 8490700 0 0 0 26563000 18072000 8490700 2945 726;12 3223 4874 7874;7875 7875 2 VKEEQLKNSAEEEVLSSEK SEENILEEELNEDIKVKEEQLKNSAEEEVL QLKNSAEEEVLSSEKQLIKMEKKEEEENGE K V K E K Q 1 0 1 0 0 1 6 0 0 0 2 3 0 0 0 3 0 0 0 2 0 0 19 2 2175.0907 A0A0U1RRH6;O94880 A0A0U1RRH6 76 94 PHF14 PHD finger protein 14 yes no 3 8.4696E-12 86.987 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2946 275 3224 4875 7876 7876 377;378;379 0 VKVDGPRSPSYGR NTKFRSHEGETAYIRVKVDGPRSPSYGRSR IRVKVDGPRSPSYGRSRSRSRSRSRSRSRS R V K G R S 0 2 0 1 0 0 0 2 0 0 0 1 0 0 2 2 0 0 1 2 0 0 13 2 1416.7474 J3KSR8;B7Z570;A8K1L8;J3KTL2;Q07955 J3KSR8 87 99 SRSF1 Serine/arginine-rich splicing factor 1 yes no 3 0.0021533 43.454 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2947 340 3225 4876 7877;7878 7878 515 0 VKVEPADSVESSPPSITHSPQNELK REKGPNNTANSSEIKVKVEPADSVESSPPS SSPPSITHSPQNELKGTNHSNEKKNTPAAQ K V K L K G 1 0 1 1 0 1 3 0 1 1 1 2 0 0 4 5 1 0 0 3 0 0 25 1 2674.345 B7Z4V7;Q2TB10 B7Z4V7 311 335 ZNF800 Zinc finger protein 800 yes no 3 4.1302E-32 100.69 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2948 539 3226 4877 7879 7879 780;781;782 0 VKYETELAMR VLQIDNARLAADDFRVKYETELAMRQSVEN ADDFRVKYETELAMRQSVENDIHGLRKVID R V K M R Q 1 1 0 0 0 0 2 0 0 0 1 1 1 0 0 0 1 0 1 1 0 0 10 1 1238.6329 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__P05784 F8VZY9 166 175 KRT18 Keratin, type I cytoskeletal 18 yes no 2 0.0054117 46.001 1 1.7362 2.614 NaN 1 Median NaN NaN NaN 0 0 Median 1.7362 2.614 NaN 1 0 Median 26290000 7931500 18359000 0 0 0 26290000 7931500 18359000 2949 134 3227 4878 7880 7880 28 1 VLAETPDSFEK LCTREDVEVAESPLRVLAETPDSFEKHIRS SPLRVLAETPDSFEKHIRSILQRSVANPAF R V L E K H 1 0 0 1 0 0 2 0 0 0 1 1 0 1 1 1 1 0 0 1 0 0 11 0 1234.6081 B7Z5I6;B4DP20;J3KMX1;Q99567 B7Z5I6 521 531 NUP88 Nuclear pore complex protein Nup88 yes no 2 0.005646 57.019 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2950 489 3228 4879 7881 7881 1884 0 VLAPILPDNFSTPTGSR PRDSPAFPDSPWRERVLAPILPDNFSTPTG APILPDNFSTPTGSRTDSQSVRHSPIAPSS R V L S R T 1 1 1 1 0 0 0 1 0 1 2 0 0 1 3 2 2 0 0 1 0 0 17 0 1783.9468 Q9NQS7;B3KPD3 Q9NQS7 281 297 INCENP Inner centromere protein yes no 2 4.587E-07 78.326 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2951 932 3229 4880;4881 7882;7883;7884;7885 7885 1644;2046 0 VLAQYYTVTDEHHR QAPDNEITIKKLRKKVLAQYYTVTDEHHRS KVLAQYYTVTDEHHRSEEELLVIFNKKISK K V L H R S 1 1 0 1 0 1 1 0 2 0 1 0 0 0 0 0 2 0 2 2 0 0 14 0 1730.8376 Q9NX58;A8K3Y5 Q9NX58 336 349 LYAR Cell growth-regulating nucleolar protein yes no 3 0.0011298 43.813 1 0.56713 0.74749 NaN 1 Median NaN NaN NaN 0 0 Median 0.56713 0.74749 NaN 1 0 Median 11646000 7489200 4156900 0 0 0 11646000 7489200 4156900 2952 944 3230 4882 7886;7887 7886 2 VLDDVSIRSPETK SDPSHTTNKLYPKDRVLDDVSIRSPETKCP DRVLDDVSIRSPETKCPKQNSIENDIEEKV R V L T K C 0 1 0 2 0 0 1 0 0 1 1 1 0 0 1 2 1 0 0 2 0 0 13 1 1457.7726 F5GXF5;E7ETD6;Q12830 F5GXF5 1229 1241 BPTF Nucleosome-remodeling factor subunit BPTF yes no 2 0.0036369 65.038 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2953 607 3231 4883 7888;7889 7889 906;907 0 VLGQLHGGPSSCSATGTNR EPGSSGSPIYSPEKRVLGQLHGGPSSCSAT LHGGPSSCSATGTNRSDQYGRVFTSWTGGG R V L N R S 1 1 1 0 1 1 0 4 1 0 2 0 0 0 1 3 2 0 0 1 0 0 19 0 1897.9065 CON__P15636 CON__P15636 410 428 yes yes 3 0.0064378 31.358 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2585200 2585200 0 0 0 0 2585200 2585200 0 + 2954 581 3232 4884 7890 7890 1 VLKQVHPDTGISSK RKRSRKESYSVYVYKVLKQVHPDTGISSKA KVLKQVHPDTGISSKAMGIMNSFVNDIFER K V L S K A 0 0 0 1 0 1 0 1 1 1 1 2 0 0 1 2 1 0 0 2 0 0 14 1 1507.8358 B2R4S9;A0A024RCL8;A0A024RCJ9;A0A024QZZ7;I6L9F7;U3KQK0;B4DR52;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q0D2M2;A8K9J7;P57053;Q96A08;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257 A0A024RCJ2 45 58 HIST1H2BI;HIST1H2BK;HIST1H2BN;HIST1H2BD;HIST1H2BM;HIST1H2BL;HIST1H2BH;HIST2H2BF;HIST1H2BC;H2BFS;HIST1H2BA;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B no no 3 0.014643 25.978 1 0.60047 0.73147 NaN 1 Median NaN NaN NaN 0 0 Median 0.60047 0.73147 NaN 1 0 Median 7854500 4460100 3394400 0 0 0 7854500 4460100 3394400 2955 10;158 3233 4885 7891 7891 0 VLNSYWVGEDSTYK SVAEERAGRHCGALRVLNSYWVGEDSTYKF RVLNSYWVGEDSTYKFFEVILIDPFHKAIR R V L Y K F 0 0 1 1 0 0 1 1 0 0 1 1 0 0 0 2 1 1 2 2 0 0 14 0 1659.7781 A0A024R2Q4;P61313;E7EQV9;E7ENU7;E7EX53 A0A024R2Q4 115 128 RPL15 Ribosomal protein L15;60S ribosomal protein L15 yes no 2 0.0019475 59.57 1 1 0.66982 0.82712 11.404 2 Median 0.74373 0.89658 NaN 1 0 Median 0.60326 0.76304 NaN 1 0 Median 22544000 12719000 9824500 3312500 1982300 1330200 19231000 10737000 8494300 2956 50 3234 4886;4887 7892;7893 7893 2 VLREEQEHK VHLEQAVSGELCRRRVLREEQEHKTKDPKE ELCRRRVLREEQEHKTKDPKEKNTSSETTM R V L H K T 0 1 0 0 0 1 3 0 1 0 1 1 0 0 0 0 0 0 0 1 0 0 9 1 1166.6044 Q15021;B4E0B7;B3KY03;E7EN77;Q6ZV00 Q15021 954 962 NCAPD2 Condensin complex subunit 1 yes no 3 0.0090608 43.492 1 0.45394 0.70799 NaN 1 Median NaN NaN NaN 0 0 Median 0.45394 0.70799 NaN 1 0 Median 66939000 48108000 18831000 0 0 0 66939000 48108000 18831000 2957 820 3235 4888 7894 7894 1 VLSDSEDEEKDADVPGTSTRK TCYNIIPLYNSMKKKVLSDSEDEEKDADVP DEEKDADVPGTSTRKRKDHQPRRRLRNRAQ K V L R K R 1 1 0 4 0 0 3 1 0 0 1 2 0 0 1 3 2 0 0 2 0 0 21 2 2277.0608 Q8WWQ0;Q9NWP3 Q8WWQ0 1279 1299 PHIP PH-interacting protein yes no 3 1.0193E-30 108.57 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2958 894 3236 4889 7895 7895 1511;1512 0 VLSPLIIK VCSPCTPPKRLPDGRVLSPLIIKSTPRNLN KRLPDGRVLSPLIIKSTPRNLNRSLQKQTS R V L I K S 0 0 0 0 0 0 0 0 0 2 2 1 0 0 1 1 0 0 0 1 0 0 8 0 881.59499 Q8NCN4 Q8NCN4 401 408 RNF169 E3 ubiquitin-protein ligase RNF169 yes yes 2 0.013056 44.721 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2959 885 3237 4890 7896 7896 1488 0 VLSRNSADDEELTNDSLTLSQSK SSPASEGGCKKKKSKVLSRNSADDEELTND DEELTNDSLTLSQSKSNEDSLILEKSQNWS K V L S K S 1 1 2 3 0 1 2 0 0 0 4 1 0 0 0 5 2 0 0 1 0 0 23 1 2521.2144 A0A0U1RRH6;O94880 A0A0U1RRH6 275 297 PHF14 PHD finger protein 14 yes no 3 7.5872E-11 51.645 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2960 275 3238 4891 7897 7897 375;376;382;1825 0 VLTANSNPSSPSAAK KEGADKRKRSRVTDKVLTANSNPSSPSAAK VLTANSNPSSPSAAKRRRT___________ K V L A K R 3 0 2 0 0 0 0 0 0 0 1 1 0 0 2 4 1 0 0 1 0 0 15 0 1442.7365 Q9NV56 Q9NV56 186 200 MRGBP MRG/MORF4L-binding protein yes yes 2 0.00085895 44.252 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2961 943 3239 4892 7898 7898 1676 0 VLTQMGSPSVR WIELHLNGPLQWLDKVLTQMGSPSVRCSSM WLDKVLTQMGSPSVRCSSMS__________ K V L V R C 0 1 0 0 0 1 0 1 0 0 1 0 1 0 1 2 1 0 0 2 0 0 11 0 1173.6176 Q53XR6;Q15796 Q53XR6 452 462 SMAD2 Mothers against decapentaplegic homolog;Mothers against decapentaplegic homolog 2 yes no 2 0.0057315 51.013 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2962 825 3240 4893 7899;7900 7900 195 1364 0 VLTVINQTQK SKLSKIRVVRKSIARVLTVINQTQKENLRK KSIARVLTVINQTQKENLRKFYKGKKYKPL R V L Q K E 0 0 1 0 0 2 0 0 0 1 1 1 0 0 0 0 2 0 0 2 0 0 10 0 1142.6659 P42766;F2Z388;A0A024R866 P42766 57 66 RPL35 60S ribosomal protein L35 yes no 2 0.0098001 56.916 1 1 0.48947 0.62684 84.668 2 Median 0.91745 1.1407 NaN 1 0 Median 0.26114 0.34446 NaN 1 0 Median 18385000 13924000 4460800 4022700 2124700 1898000 14362000 11799000 2562800 2963 760 3241 4894;4895 7901;7902;7903 7902 3 VLYAYGYYTGEPSKR PRIASGLGLAWIVGRVLYAYGYYTGEPSKR VLYAYGYYTGEPSKRSRGALGSIALLGLVG R V L K R S 1 1 0 0 0 0 1 2 0 0 1 1 0 0 1 1 1 0 4 1 0 0 15 1 1765.8675 Q53GB9;A0A024R8Z1;Q5VV89;O14880 Q53GB9 98 112 MGST3 Microsomal glutathione S-transferase 3 yes no 3 0.0036157 35.891 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 4744800 0 4744800 0 0 0 4744800 0 4744800 2964 109 3242 4896 7904 7904 1 VMENSSGTPDILTR MSRSNVQPTAAPGQKVMENSSGTPDILTRH KVMENSSGTPDILTRHFTIDDFEIGRPLGK K V M T R H 0 1 1 1 0 0 1 1 0 1 1 0 1 0 1 2 2 0 0 1 0 0 14 0 1518.7348 J3QR41;J3KTD6;J3QLN8;Q96GD4;J3KRJ2;J3KRF8 J3QR41 16 29 AURKB Aurora kinase B yes no 2 2.1177E-06 92.773 1 3 0.49342 0.62761 NaN 1 Median NaN NaN NaN 0 0 Median 0.49342 0.62761 NaN 1 0 Median 4661200 1731100 2930100 0 0 0 4661200 1731100 2930100 2965 681 3243;3244 4897;4898;4899;4900 7905;7906;7907;7908 7906 146 1016;1936 1 VNDLIEFR NTFAKIKDLELLLDRVNDLIEFRIDAILEE LELLLDRVNDLIEFRIDAILEEMSSTPLCQ R V N F R I 0 1 1 1 0 0 1 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 8 0 1004.5291 Q8TE73 Q8TE73 820 827 DNAH5 Dynein heavy chain 5, axonemal yes yes 2 0.008187 57.047 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 16071000 16071000 0 16071000 16071000 0 0 0 0 2966 891 3245 4901 7909 7909 1 VNDTIQIDLETGK THDARTIRYPDPLIKVNDTIQIDLETGKIT IKVNDTIQIDLETGKITDFIKFDTGNLCMV K V N G K I 0 0 1 2 0 1 1 1 0 2 1 1 0 0 0 0 2 0 0 1 0 0 13 0 1444.7409 Q96IR1;B2R491;P62701;Q53HV1 Q96IR1 136 148 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform yes no 2 0.0016415 63.727 1 1 1.7976 2.3402 NaN 1 Median NaN NaN NaN 0 0 Median 1.7976 2.3402 NaN 1 0 Median 13178000 7782500 5395400 1117700 1117700 0 12060000 6664700 5395400 2967 396 3246 4902;4903 7910;7911 7911 2 VNEHEQDGNELQTTPEFR ANSQLSTSQPSLRHKVNEHEQDGNELQTTP HEQDGNELQTTPEFRAHVAKKLGALLDSFI K V N F R A 0 1 2 1 0 2 4 1 1 0 1 0 0 1 1 0 2 0 0 1 0 0 18 0 2141.9614 F5H3K2;E7ENF1;G5EA44;B4DWJ9;F5H7W8;Q96C57;B4DRA4 F5H3K2 20 37 C12orf43 Uncharacterized protein C12orf43 yes no 3 4.362E-06 46.595 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2968 506 3247 4904 7912 7912 1888 0 VNFPENGFLSPDK YRRPYEKGRLIIEFKVNFPENGFLSPDKLS FKVNFPENGFLSPDKLSLLEKLLPERKEVE K V N D K L 0 0 2 1 0 0 1 1 0 0 1 1 0 2 2 1 0 0 0 1 0 0 13 0 1462.7092 B7Z5C0;Q9NXZ8;P31689 B7Z5C0 169 181 HDJ2;DNAJA1 DnaJ homolog subfamily A member 1 yes no 2 6.0151E-05 87.566 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2969 540 3248 4905;4906 7913;7914 7914 783 0 VNPQISDEKDEDEKEEK DLAAKRRPEEKEPEKVNPQISDEKDEDEKE PQISDEKDEDEKEEKRRKTTPKEPTEKKMA K V N E K R 0 0 1 3 0 1 5 0 0 1 0 3 0 0 1 1 0 0 0 1 0 0 17 2 2030.928 Q59FP7;A0A024R7E3;P26358;I6L9H2 Q59FP7 294 310 DNMT1 DNA (cytosine-5)-methyltransferase;DNA (cytosine-5)-methyltransferase 1 yes no 3 0.026025 16.494 1 0.85812 1.2392 NaN 1 Median NaN NaN NaN 0 0 Median 0.85812 1.2392 NaN 1 0 Median 6622000 3339100 3283000 0 0 0 6622000 3339100 3283000 2970 91 3249 4907 7915 7915 0 VNTLIRPDGEK IKQAVKKLYDIDVAKVNTLIRPDGEKKAYV DVAKVNTLIRPDGEKKAYVRLAPDYDALDV K V N E K K 0 1 1 1 0 0 1 1 0 1 1 1 0 0 1 0 1 0 0 1 0 0 11 1 1240.6776 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 126 136 RPL23A 60S ribosomal protein L23a yes no 2;3 1.01E-38 152.54 3 0.47536 0.70257 9.8272 3 Median NaN NaN NaN 0 0 Median 0.47536 0.70257 9.8272 3 0 Median 176490000 118560000 57937000 0 0 0 176490000 118560000 57937000 2971 385 3250 4908;4909;4910 7916;7917;7918;7919;7920 7919 5 VNTLIRPDGEKK IKQAVKKLYDIDVAKVNTLIRPDGEKKAYV VAKVNTLIRPDGEKKAYVRLAPDYDALDVA K V N K K A 0 1 1 1 0 0 1 1 0 1 1 2 0 0 1 0 1 0 0 1 0 0 12 2 1368.7725 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 126 137 RPL23A 60S ribosomal protein L23a yes no 3 0.00018792 75.088 1 1 0.61541 0.80572 48.544 2 Median 0.95307 1.1357 NaN 1 0 Median 0.39738 0.57162 NaN 1 0 Median 239800000 145990000 93809000 116890000 59258000 57635000 122910000 86736000 36175000 2972 385 3251 4911;4912 7921;7922;7923;7924 7924 4 VPDEEENEESDNEKETEK YDSDPVKAWKEAQQKVPDEEENEESDNEKE EEENEESDNEKETEKSDSVTDSGPTFNYLL K V P E K S 0 0 2 2 0 0 8 0 0 0 0 2 0 0 1 1 1 0 0 1 0 0 18 1 2148.8819 P11388 P11388 1097 1114 TOP2A DNA topoisomerase 2-alpha yes yes 2;3 6.5451E-297 217.82 5 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2973 734 3252 4913;4914;4915;4916;4917;4918;4919 7925;7926;7927;7928;7929;7930;7931;7932;7933;7934;7935;7936;7937;7938;7939;7940;7941;7942;7943;7944 7936 1135 0 VPGEDGTLPPTQGSPLR RCVPEKPAKAITSSRVPGEDGTLPPTQGSP GEDGTLPPTQGSPLRTSNVQTCLTKLSMEI R V P L R T 0 1 0 1 0 1 1 3 0 0 2 0 0 0 4 1 2 0 0 1 0 0 17 0 1719.8792 Q9Y2F5 Q9Y2F5 242 258 ICE1 Little elongation complex subunit 1 yes yes 2 3.2023E-08 81.656 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2974 962 3253 4920;4921 7945;7946;7947 7945 1736;2058 0 VPKPEPIPEPKEPSPEK EPSVQEATSTSDILKVPKPEPIPEPKEPSP KPEPIPEPKEPSPEKNSKKEKEKEKTRPRS K V P E K N 0 0 0 0 0 0 4 0 0 1 0 3 0 0 7 1 0 0 0 1 0 0 17 2 1897.0197 A0A0S2Z4W1;A9Z1X7;B7Z7U0;A0A0S2Z4Z6;Q8IYB3;M0R088;E9PCT1;B4DED5 A0A0S2Z4W1 247 263 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 3 1.4922E-09 90.884 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2975 266 3254 4922;4923 7948;7949;7950 7950 366 0 VPPAPVPCPPPSPGPSAVPSSPK VSQKPPPPSEKVEVKVPPAPVPCPPPSPGP PPPSPGPSAVPSSPKSVATEERAAPSTAPA K V P P K S 2 0 0 0 1 0 0 1 0 0 0 1 0 0 11 4 0 0 0 3 0 0 23 0 2218.1456 Q53GY1;O95817 Q53GY1 366 388 BAG3 BAG family molecular chaperone regulator 3 yes no 2 1.0529E-07 45.79 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2976 722 3255 4924 7951;7952 7952 1105;1106;1107 0 VPPFVDLNVNSNEGK NNLNLPQVALSFGFKVPPFVDLNVNSNEGK VPPFVDLNVNSNEGKQKKRGGGGGFGYQKT K V P G K Q 0 0 3 1 0 0 1 1 0 0 1 1 0 1 2 1 0 0 0 3 0 0 15 0 1627.8206 Q4ZG72;A0A024RAH8;Q9NVP1;Q8N254 Q4ZG72 493 507 DDX18 ATP-dependent RNA helicase DDX18 yes no 2 3.8284E-07 69.431 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2977 130 3256 4925;4926 7953;7954;7955 7953 193 0 VPQLEIVPNSAEER YLGYLEQLLRLKKYKVPQLEIVPNSAEERL KVPQLEIVPNSAEERLHSMKEGIHAQQKEP K V P E R L 1 1 1 0 0 1 3 0 0 1 1 0 0 0 2 1 0 0 0 2 0 0 14 0 1579.8206 CON__P02662 CON__P02662 106 119 yes yes 2 8.3296E-61 125.28 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 + 2978 572 3257 4927;4928 7956;7957 7956 852 0 VPSPPDEHQEAENAVSSGNR NHEKQESQDLRATAKVPSPPDEHQEAENAV DEHQEAENAVSSGNRDSKVPSEGKKSLYTD K V P N R D 2 1 2 1 0 1 3 1 1 0 0 0 0 0 3 3 0 0 0 2 0 0 20 0 2118.9566 A8K4B4;Q9BXS6 A8K4B4 133 152 NUSAP1 Nucleolar and spindle-associated protein 1 yes no 3 3.622E-16 80.156 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2979 352 3258 4929;4930 7958;7959 7958 537 0 VPVNLLNSPDCDVK LRQTNKTKQSCPFGRVPVNLLNSPDCDVKT RVPVNLLNSPDCDVKTDDSVVPCFMKRQTS R V P V K T 0 0 2 2 1 0 0 0 0 0 2 1 0 0 2 1 0 0 0 3 0 0 14 0 1568.7868 P33981 P33981 274 287 TTK Dual specificity protein kinase TTK yes yes 2 0.00077177 63.128 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2980 753 3259 4931;4932 7960;7961 7960 1173 0 VQALEEANNDLENK TMQELNSRLASYLDKVQALEEANNDLENKI KVQALEEANNDLENKIQDWYDKKGPAAIQK K V Q N K I 2 0 3 1 0 1 3 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 14 0 1585.7584 CON__P35527;P35527 CON__P35527 171 184 KRT9 Keratin, type I cytoskeletal 9 yes no 2 0.00058415 58.676 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 34697000 34697000 0 11862000 11862000 0 22835000 22835000 0 + 2981 582 3260 4933;4934 7962;7963 7962 2 VQAYEEPSVASSPNGK FCCPWEQLTQDWESRVQAYEEPSVASSPNG QAYEEPSVASSPNGKESDLRRSEVPCAPMP R V Q G K E 2 0 1 0 0 1 2 1 0 0 0 1 0 0 2 3 0 0 1 2 0 0 16 0 1661.7897 Q96F88;Q99575 Q96F88 719 734 POP1 Ribonucleases P/MRP protein subunit POP1 yes no 2 1.2551E-36 128.45 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2982 901 3261 4935;4936 7964;7965;7966 7966 1540;1541 0 VQDTSNTGLGEDIIHQLSK KESEDSDEENDFTEKVQDTSNTGLGEDIIH SNTGLGEDIIHQLSKSE_____________ K V Q S K S 0 0 1 2 0 2 1 2 1 2 2 1 0 0 0 2 2 0 0 1 0 0 19 0 2054.028 A8K330;Q8IWA0;Q05D27 A8K330 792 810 WDR75 WD repeat-containing protein 75 yes no 3 4.561E-06 45.436 1 2 0.59535 0.78454 NaN 1 Median NaN NaN NaN 0 0 Median 0.59535 0.78454 NaN 1 0 Median 12835000 8506600 4328800 0 0 0 12835000 8506600 4328800 2983 347 3262;3263 4937;4938;4939 7967;7968;7969 7968 525;1847;1848 1 VQEFEHVNGR HVLTRIGVMSLIRKKVQEFEHVNGRWSMPE LIRKKVQEFEHVNGRWSMPELAEVEENKKM K V Q G R W 0 1 1 0 0 1 2 1 1 0 0 0 0 1 0 0 0 0 0 2 0 0 10 0 1213.584 B3KY63;F5GWX5;A0A0C4DGG9;Q14839 B3KY63 1480 1489 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 3 0.029536 23.226 1 0.75986 1.0189 NaN 1 Median NaN NaN NaN 0 0 Median 0.75986 1.0189 NaN 1 0 Median 8916400 5173800 3742600 0 0 0 8916400 5173800 3742600 2984 244 3264 4940 7970 7970 1 VQEHEDSGDSEVENEAK ENDEDALLRRLRGPRVQEHEDSGDSEVENE EHEDSGDSEVENEAKGNFPPQKKPVWVDEE R V Q A K G 1 0 1 2 0 1 5 1 1 0 0 1 0 0 0 2 0 0 0 2 0 0 17 0 1900.7923 Q9Y5J1;B2RAX6 Q9Y5J1 115 131 UTP18 U3 small nucleolar RNA-associated protein 18 homolog yes no 2 4.9537E-175 182.15 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2985 968 3265 4941;4942 7971;7972;7973 7973 1757 0 VQSGSESVIQEYVDLR KAQLEPVASPAKKPKVQSGSESVIQEYVDL QSGSESVIQEYVDLRTHYSELTTLTSQYIK K V Q L R T 0 1 0 1 0 2 2 1 0 1 1 0 0 0 0 3 0 0 1 3 0 0 16 0 1807.8952 Q15149 Q15149 1442 1457 PLEC Plectin yes yes 2 0.003879 37.426 1 0.74749 0.93277 NaN 1 Median 0.74749 0.93277 NaN 1 0 Median NaN NaN NaN 0 0 Median 2645600 1583200 1062400 2645600 1583200 1062400 0 0 0 2986 822 3266 4943 7974 7974 1 VQVAALQASPPLDQDDR KSGKVAAIVVKRPRKVQVAALQASPPLDQD VAALQASPPLDQDDRAFEVMDEFDGRSFRS K V Q D R A 3 1 0 3 0 3 0 0 0 0 2 0 0 0 2 1 0 0 0 2 0 0 17 0 1821.9221 U3KQJ2;B1AN86;B7Z2R3;A0A024R225;B7Z954;A0A024R233;A0A1B0GTW1;Q9UDY2 U3KQJ2 99 115 TJP2 Tight junction protein ZO-2 yes no 2 2.2229E-05 49.483 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2987 38 3267 4944 7975 7975 35 0 VQYLNEAIDTNEK V Q E K 1 0 2 1 0 1 2 0 0 1 1 1 0 0 0 0 1 0 1 1 0 0 13 0 1535.7468 REV__C9JDX1 yes no 2 0.02461 55.314 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 + 2988 973 3268 4945;4946 7976;7977 7976 2061 0 VQYTETEPYHNYR EIERFWRGGQYENFRVQYTETEPYHNYRER FRVQYTETEPYHNYRERERERERENRQRER R V Q Y R E 0 1 1 0 0 1 2 0 1 0 0 0 0 0 1 0 2 0 3 1 0 0 13 0 1698.7638 E7ERS3;B4DTK7;Q86VM9;Q86YU5;B4DZ24 E7ERS3 414 426 ZC3H18;FLJ00419 Zinc finger CCCH domain-containing protein 18 yes no 3 0.0042965 34.685 1 1.8193 2.4352 NaN 1 Median NaN NaN NaN 0 0 Median 1.8193 2.4352 NaN 1 0 Median 7590800 3136300 4454500 0 0 0 7590800 3136300 4454500 2989 498 3269 4947 7978 7978 1 VREEEIEVDSR KRKKGEKRASSPFRRVREEEIEVDSRVADN PFRRVREEEIEVDSRVADNSFDAKRGAAGD R V R S R V 0 2 0 1 0 0 4 0 0 1 0 0 0 0 0 1 0 0 0 2 0 0 11 1 1359.663 B2RAU8;A0A0A0MRM9;Q14978;Q96J17 B2RAU8 628 638 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 3 0.013075 34.685 1 0.65461 1.0522 NaN 1 Median NaN NaN NaN 0 0 Median 0.65461 1.0522 NaN 1 0 Median 15091000 8448800 6642300 0 0 0 15091000 8448800 6642300 2990 214 3270 4948 7979 7979 0 VREVAATVHR HIILVINAGKHKSSKVREVAATVHRKLKTF HKSSKVREVAATVHRKLKTFMEITLEEDSI K V R H R K 2 2 0 0 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 3 0 0 10 1 1136.6414 B3KRQ2;Q86XI2;B4DHE5;B4DXB7;Q9NXD3;H0Y6U5 B3KRQ2 1101 1110 NCAPG2 Condensin-2 complex subunit G2 yes no 3 0.0069241 44.299 1 0.61633 0.87121 NaN 1 Median NaN NaN NaN 0 0 Median 0.61633 0.87121 NaN 1 0 Median 7431600 4339800 3091800 0 0 0 7431600 4339800 3091800 2991 441 3271 4949 7980 7980 1 VREYELR VRGAKAEEILEKGLKVREYELRKNNFSDTG EILEKGLKVREYELRKNNFSDTGNFGFGIQ K V R L R K 0 2 0 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 7 1 963.51378 Q08ES8;Q5VVD0;P62913;Q5VVC9;Q5VVC8 Q08ES8 88 94 RPL11 60S ribosomal protein L11 yes no 2;3 1.0414E-35 139.88 1 2 0.67048 1.175 11.825 3 Median 0.75617 0.96548 NaN 1 0 Median 0.6545 1.1844 1.1231 2 0 Median 362150000 216930000 145220000 6090100 3392800 2697300 356060000 213540000 142520000 2992 791 3272 4950;4951;4952 7981;7982;7983;7984 7984 4 VREYELRK VRGAKAEEILEKGLKVREYELRKNNFSDTG ILEKGLKVREYELRKNNFSDTGNFGFGIQE K V R R K N 0 2 0 0 0 0 2 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 8 2 1091.6087 Q08ES8;Q5VVD0;P62913;Q5VVC9;Q5VVC8 Q08ES8 88 95 RPL11 60S ribosomal protein L11 yes no 3 0.0036917 56.432 1 0.71156 0.88554 NaN 1 Median 0.71156 0.88554 NaN 1 0 Median NaN NaN NaN 0 0 Median 55279000 32297000 22981000 55279000 32297000 22981000 0 0 0 2993 791 3273 4953 7985;7986 7985 2 VSEFNVSSEGSGEK KNRRKLAERSEASLKVSEFNVSSEGSGEKL KVSEFNVSSEGSGEKLVLADLLEPVKTSSS K V S E K L 0 0 1 0 0 0 3 2 0 0 0 1 0 1 0 4 0 0 0 2 0 0 14 0 1454.6525 Q9BVJ6;O60531 Q9BVJ6 71 84 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes no 2 4.6153E-23 118.52 1 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2994 919 3274 4954;4955;4956 7987;7988;7989;7990 7988 1598;1599 0 VSGDDFSVPSK KKSKKRKLTSVKRARVSGDDFSVPSKNSES KRARVSGDDFSVPSKNSESTLFDSVEGDGA R V S S K N 0 0 0 2 0 0 0 1 0 0 0 1 0 1 1 3 0 0 0 2 0 0 11 0 1136.535 B4DZG2;A0A024R8C1;Q15361 B4DZG2 402 412 TTF1 Transcription termination factor 1 yes no 2 0.0047604 45.507 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2995 103 3275 4957 7991 7991 147 0 VSISEGDDKIEYR TKNLVPGESVYGEKRVSISEGDDKIEYRAW KRVSISEGDDKIEYRAWNPFRSKLAAAILG R V S Y R A 0 1 0 2 0 0 2 1 0 2 0 1 0 0 0 2 0 0 1 1 0 0 13 1 1509.7311 Q96BS4;P22087;M0QXL5;M0R2Q4;B4DLD4;M0R0P1;M0R299;M0R2U2;M0R1H0;M0R2B0 Q96BS4 62 74 FBL rRNA 2-O-methyltransferase fibrillarin yes no 3 0.0021137 58.831 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 31474000 31474000 0 0 0 0 31474000 31474000 0 2996 747 3276 4958 7992 7992 1 VSLLGPVTTPEHQLLK ENSNAFSTPQTPDIKVSLLGPVTTPEHQLL SLLGPVTTPEHQLLKTPSSSSLSQRVRSTL K V S L K T 0 0 0 0 0 1 1 1 1 0 4 1 0 0 2 1 2 0 0 2 0 0 16 0 1730.9931 B2RE34;A0A024R136;Q9H0H5;Q9H9L9 B2RE34 572 587 RACGAP1 Rac GTPase-activating protein 1 yes no 3 0.00020647 43.408 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2997 25 3277 4959 7993 7993 1775;1776 0 VSPASPAGSPSADFAVHGESLGDR PESLPSWALSDTDSRVSPASPAGSPSADFA PSADFAVHGESLGDRHLRTLQISYDALKDE R V S D R H 4 1 0 2 0 0 1 3 1 0 1 0 0 1 3 5 0 0 0 2 0 0 24 0 2310.0877 Q96C92;A0A0A0MRP9 Q96C92 239 262 SDCCAG3 Serologically defined colon cancer antigen 3 yes no 3 7.4001E-08 42.828 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2998 899 3278 4960 7994 7994 1537;1538 0 VSPSFSAELK RAKLDQQTLRNLLSKVSPSFSAELKQLNQQ NLLSKVSPSFSAELKQLNQQYEKLFHKWML K V S L K Q 1 0 0 0 0 0 1 0 0 0 1 1 0 1 1 3 0 0 0 1 0 0 10 0 1063.555 B4DYU9;A0A024R411;Q13416 B4DYU9 279 288 ORC2L;ORC2 Origin recognition complex subunit 2 yes no 2 0.027544 48.794 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 2999 58 3279 4961 7995 7995 65 0 VSPSTSYTPSR STWVKEAYVNANQARVSPSTSYTPSRHKRS NQARVSPSTSYTPSRHKRSYEDDDDMDLQP R V S S R H 0 1 0 0 0 0 0 0 0 0 0 0 0 0 2 4 2 0 1 1 0 0 11 0 1180.5724 A0A0S2Z5P5;Q9BTE3 A0A0S2Z5P5 153 163 MCMBP Mini-chromosome maintenance complex-binding protein yes no 2 0.0032331 52.79 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3000 271 3280 4962 7996 7996 371 0 VSRSSFSSDPDESEGIPLK TEFPRKIREQEPARRVSRSSFSSDPDESEG SFSSDPDESEGIPLKRRRVSFGGHLRPELF R V S L K R 0 1 0 2 0 0 2 1 0 1 1 1 0 1 2 6 0 0 0 1 0 0 19 1 2035.9698 Q70L73 Q70L73 59 77 MKI67 yes yes 2 2.2196E-18 100.97 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3001 865 3281;3282 4963;4964 7997;7998;7999;8000;8001 8000 1437;1438;1439;1440;1441 0 VSSPLPSPSAMTDAANSQAAAK YMNLASHIQPGTVNRVSSPLPSPSAMTDAA PSAMTDAANSQAAAKLALRKQLEKTLLEIP R V S A K L 6 0 1 1 0 1 0 0 0 0 1 1 1 0 3 5 1 0 0 1 0 0 22 0 2100.0157 A0A0U1RRM1;B3KSZ4;Q8WXI9;A0A0U1RR30 A0A0U1RRM1 316 337 GATAD2B Transcriptional repressor p66-beta yes no 2 2.295E-16 77.221 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3002 276 3283;3284 4965;4966 8002;8003;8004 8003 57 388;389 0 VTEEIVSSEHDEGLSFSGK TDHPGRTGRPTLPGKVTEEIVSSEHDEGLS IVSSEHDEGLSFSGKVQCYGRELNQPASAA K V T G K V 0 0 0 1 0 0 4 2 1 1 1 1 0 1 0 4 1 0 0 2 0 0 19 0 2048.9538 Q5VWN6 Q5VWN6 1499 1517 FAM208B Protein FAM208B yes yes 3 0.00026552 33.405 1 1 0.70714 0.87512 32.256 2 Median 0.58506 0.69664 NaN 1 0 Median 0.85469 1.0993 NaN 1 0 Median 20494000 12064000 8430200 9158800 5628500 3530300 11335000 6435400 4899800 3003 852 3285 4967;4968 8005;8006;8007 8007 3 VTFEADENENITVVK ______________________________ VTFEADENENITVVKGIRLSENVIDRMKES R V T V K G 1 0 2 1 0 0 3 0 0 1 0 1 0 1 0 0 2 0 0 3 0 0 15 0 1706.8363 A4D1N4;C9JRZ6;Q9NX63;B7Z1X9;F8WAR4;F8WD73 A4D1N4 10 24 CHCHD3 MICOS complex subunit MIC19 yes no 2 1.3349E-06 88.187 1 0.44753 0.53014 NaN 1 Median 0.44753 0.53014 NaN 1 0 Median NaN NaN NaN 0 0 Median 7515300 4720300 2795000 7515300 4720300 2795000 0 0 0 3004 311 3286 4969 8008 8008 1 VTIAQGGVLPNIQAVLLPK LAIRNDEELNKLLGKVTIAQGGVLPNIQAV QGGVLPNIQAVLLPKKTESHHKAK______ K V T P K K 2 0 1 0 0 2 0 2 0 2 3 1 0 0 2 0 1 0 0 3 0 0 19 0 1930.1615 A3KPC7;A0A024RAS2;B2R5B3;A4FTV9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9;B4E0B3;Q08AJ9;A0A024R017;Q93077;Q7L7L0;P04908 A3KPC7 101 119 HIST1H2AH;H2AFJ;HIST1H2AK;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AC;HIST3H2A Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E yes no 2 5.0336E-66 142.83 1 1 0.73418 0.90881 0.095794 2 Median 0.73407 0.90819 NaN 1 0 Median 0.73428 0.90942 NaN 1 0 Median 49746000 28209000 21536000 22678000 12737000 9941500 27067000 15473000 11595000 3005 132 3287 4970;4971 8009;8010;8011 8010 3 VTLYECHSQGEIR KEGDPLVFATVGSNRVTLYECHSQGEIRLL NRVTLYECHSQGEIRLLQSYVDADADENFY R V T I R L 0 1 0 0 1 1 2 1 1 1 1 0 0 0 0 1 1 0 1 1 0 0 13 0 1590.746 B4DFK0;E9PJK2;B4DVW7;O75530 B4DFK0 121 133 EED Polycomb protein EED yes no 3 0.0024083 40.941 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1790000 1790000 0 0 0 0 1790000 1790000 0 3006 464 3288 4972 8012 8012 1 VTQHESDNENEIQIQNK VSSIHTDDSLEVERRVTQHESDNENEIQIQ QHESDNENEIQIQNKLKKDFPKQFDQVSVF R V T N K L 0 0 3 1 0 3 3 0 1 2 0 1 0 0 0 1 1 0 0 1 0 0 17 0 2024.9399 Q5VZL5 Q5VZL5 117 133 ZMYM4 Zinc finger MYM-type protein 4 yes yes 3 1.7897E-11 97.488 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3007 853 3289 4973;4974 8013;8014;8015 8015 1408 0 VTSSITIYPSDSSSPR TLEKQKPVSKPGPNKVTSSITIYPSDSSSP TSSITIYPSDSSSPRAAPGEALRERHTSTS K V T P R A 0 1 0 1 0 0 0 0 0 2 0 0 0 0 2 6 2 0 1 1 0 0 16 0 1695.8315 A0A024RAC0;Q86V48 A0A024RAC0 792 807 LUZP1 Leucine zipper protein 1 yes no 2 6.8804E-09 97.86 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3008 127 3290 4975;4976 8016;8017;8018 8017 188;189;190;1801 0 VVDRDSEEAEIIR DPIDVNYEKLKTDIKVVDRDSEEAEIIRKY IKVVDRDSEEAEIIRKYVKNTHATTHNAYD K V V I R K 1 2 0 2 0 0 3 0 0 2 0 0 0 0 0 1 0 0 0 2 0 0 13 1 1529.7686 A0A024R3T8;P09874;B2R5W3;B4E0E1 A0A024R3T8 803 815 PARP1 Poly [ADP-ribose] polymerase 1 yes no 3 0.00031901 57.136 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 10229000 10229000 0 0 0 0 10229000 10229000 0 3009 56 3291 4977 8019;8020 8019 2 VVDRDSEEAEIIRK DPIDVNYEKLKTDIKVVDRDSEEAEIIRKY KVVDRDSEEAEIIRKYVKNTHATTHNAYDL K V V R K Y 1 2 0 2 0 0 3 0 0 2 0 1 0 0 0 1 0 0 0 2 0 0 14 2 1657.8635 A0A024R3T8;P09874;B2R5W3 A0A024R3T8 803 816 PARP1 Poly [ADP-ribose] polymerase 1 yes no 3;4 5.9139E-06 73.834 5 0.36408 0.50388 7.8611 4 Median NaN NaN NaN 0 0 Median 0.36408 0.50388 7.8611 4 0 Median 157910000 113510000 44408000 0 0 0 157910000 113510000 44408000 3010 56 3292 4978;4979;4980;4981;4982 8021;8022;8023;8024;8025;8026;8027 8027 7 VVEAVNSDSDSEFGIPK SDTVPKPKRAPKQKKVVEAVNSDSDSEFGI EAVNSDSDSEFGIPKKTTTPKGKGRGAKKR K V V P K K 1 0 1 2 0 0 2 1 0 1 0 1 0 1 1 3 0 0 0 3 0 0 17 0 1791.8527 Q02880;Q71UH4;Q59H80;B4DLV2;Q8WTY5 Q02880 1516 1532 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 2 2.0972E-27 116.13 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3011 796 3293;3294 4983;4984;4985;4986 8028;8029;8030;8031;8032;8033;8034;8035;8036;8037;8038 8037 1274;1275 0 VVEAVNSDSDSEFGIPKK SDTVPKPKRAPKQKKVVEAVNSDSDSEFGI AVNSDSDSEFGIPKKTTTPKGKGRGAKKRK K V V K K T 1 0 1 2 0 0 2 1 0 1 0 2 0 1 1 3 0 0 0 3 0 0 18 1 1919.9476 Q02880;Q71UH4;Q59H80;B4DLV2;Q8WTY5 Q02880 1516 1533 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 2;3 1.5888E-208 194.7 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3012 796 3295 4987;4988;4989 8039;8040;8041;8042;8043;8044 8043 1274;1275 0 VVFRDPYR KDIIHDPGRGAPLAKVVFRDPYRFKKRTEL RGAPLAKVVFRDPYRFKKRTELFIAAEGIH K V V Y R F 0 2 0 1 0 0 0 0 0 0 0 0 0 1 1 0 0 0 1 2 0 0 8 1 1050.5611 E9PKZ0;P62917;G3V1A1;B4DVG7;E9PKU4 E9PKZ0 61 68 RPL8 60S ribosomal protein L8 yes no 3 0.0077211 50.607 1 0.41338 0.74691 NaN 1 Median NaN NaN NaN 0 0 Median 0.41338 0.74691 NaN 1 0 Median 155920000 108840000 47082000 0 0 0 155920000 108840000 47082000 3013 624 3296 4990 8045;8046 8045 2 VVGAVIDQGLITR KRRRVLNRERRLRHRVVGAVIDQGLITRHH HRVVGAVIDQGLITRHHLKKRASSARANIT R V V T R H 1 1 0 1 0 1 0 2 0 2 1 0 0 0 0 0 1 0 0 3 0 0 13 0 1339.7823 E9PLD3;A0A0B4J220;L0R588;E9PRG8 E9PLD3 36 48 C11orf98;C11orf48 Uncharacterized protein C11orf98 yes no 2 0.0085519 51.092 1 0.8126 1.0581 NaN 1 Median NaN NaN NaN 0 0 Median 0.8126 1.0581 NaN 1 0 Median 5253700 2978600 2275000 0 0 0 5253700 2978600 2275000 3014 235 3297 4991 8047;8048 8047 2 VVNANQNASPNVPGK GRKRTTMLKIATAAKVVNANQNASPNVPGK VVNANQNASPNVPGKRGRPRKLKLCKAGRP K V V G K R 2 0 4 0 0 1 0 1 0 0 0 1 0 0 2 1 0 0 0 3 0 0 15 0 1507.7743 B9EGR5;Q8IWI9;Q9H6M4;H3BP52;H3BTF4 B9EGR5 599 613 MGA MAX gene-associated protein yes no 2 2.6805E-09 96.489 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3015 555 3298 4992 8049 8049 833 0 VVQVSAGDSHTAALTDDGR EGSEMVPGKVELQEKVVQVSAGDSHTAALT SAGDSHTAALTDDGRVFLWGSFRDNNGVIG K V V G R V 3 1 0 3 0 1 0 2 1 0 1 0 0 0 0 2 2 0 0 3 0 0 19 0 1897.913 C9JRH2;C9JMJ4;C9J3R0;C9JQZ4;C9JW69;Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754 C9JRH2 121 139 RCC1 Regulator of chromosome condensation yes no 3 3.3155E-24 107.72 1 1 0.60611 0.77628 51.86 2 Median 0.88861 1.1202 NaN 1 0 Median 0.41342 0.53798 NaN 1 0 Median 40695000 24839000 15856000 17485000 9364400 8120600 23210000 15475000 7735100 3016 262 3299 4993;4994 8050;8051;8052;8053 8053 4 VVQVYR VQVVRGHYKGQQIGKVVQVYRKKYVIYIER HYKGQQIGKVVQVYRKKYVIYIERVQREKA K V V Y R K 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 6 0 762.43882 Q6IBH6;P61254;J3KTJ8;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;A0A024RBF6;J3KS10;H7C1F9;Q2PPJ7;Q9UNX3;E5RIT6 Q6IBH6 70 75 RPL26;hCG_26523;RALGAPA2;RPL26L1 60S ribosomal protein L26;Ral GTPase-activating protein subunit alpha-2;60S ribosomal protein L26-like 1 no no 2 0.014115 84.609 1 0.27152 0.36025 NaN 1 Median NaN NaN NaN 0 0 Median 0.27152 0.36025 NaN 1 0 Median 10931000 8580500 2350400 0 0 0 10931000 8580500 2350400 3017 782;959 3300 4995 8054 8054 1 VVSEDFLQDVSASTK KMNKKMEEVKEANIRVVSEDFLQDVSASTK VVSEDFLQDVSASTKSLQELFLAHILSPWG R V V T K S 1 0 0 2 0 1 1 0 0 0 1 1 0 1 0 3 1 0 0 3 0 0 15 0 1623.7992 A0A024R3T8;P09874;B2R5W3;B4E0E1 A0A024R3T8 453 467 PARP1 Poly [ADP-ribose] polymerase 1 yes no 2 3.1755E-06 83.314 1 0.43403 0.54603 NaN 1 Median NaN NaN NaN 0 0 Median 0.43403 0.54603 NaN 1 0 Median 59632000 43958000 15675000 0 0 0 59632000 43958000 15675000 3018 56 3301 4996 8055 8055 1 VVTLQGQIIEQSGTMTGGGSK DQATRVAYQKDRRWRVVTLQGQIIEQSGTM QIIEQSGTMTGGGSKVMKGRMGSSLVIEIS R V V S K V 0 0 0 0 0 3 1 5 0 2 1 1 1 0 0 2 3 0 0 2 0 0 21 0 2090.0678 Q9NTJ3;E9PD53;B3KXX5 Q9NTJ3 737 757 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 2 0.00015253 45.33 1 0.49198 0.64972 NaN 1 Median NaN NaN NaN 0 0 Median 0.49198 0.64972 NaN 1 0 Median 13798000 9481300 4316400 0 0 0 13798000 9481300 4316400 3019 941 3302 4997 8056 8056 221 0 VVVDPVVTEQPSTSSAAK GKTESSSVVRTRSNRVVVDPVVTEQPSTSS DPVVTEQPSTSSAAKTFITKANASAIPGKT R V V A K T 2 0 0 1 0 1 1 0 0 0 0 1 0 0 2 3 2 0 0 5 0 0 18 0 1812.9469 Q8WWQ0;Q9NWP3 Q8WWQ0 1511 1528 PHIP PH-interacting protein yes no 2 1.4912E-115 162.29 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3020 894 3303;3304 4998;4999;5000;5001 8057;8058;8059;8060;8061;8062;8063;8064;8065 8061 1513;1514;1515;2025 0 VWETANNR SQAYFALASTDGHLRVWETANNRLHQEYVP STDGHLRVWETANNRLHQEYVPSAHLSGTC R V W N R L 1 1 2 0 0 0 1 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 8 0 988.47264 Q15061 Q15061 40 47 WDR43 WD repeat-containing protein 43 yes yes 2 0.017253 57.281 1 0.68832 0.84503 NaN 1 Median NaN NaN NaN 0 0 Median 0.68832 0.84503 NaN 1 0 Median 3886700 2169200 1717500 0 0 0 3886700 2169200 1717500 3021 821 3305 5002 8066 8066 1 VYASSGDGEVYVWDVNSR NGRVAASTFSSDSKKVYASSGDGEVYVWDV SSGDGEVYVWDVNSRKCLNRFVDEGSLYGL K V Y S R K 1 1 1 2 0 0 1 2 0 0 0 0 0 0 0 3 0 1 2 4 0 0 18 0 2001.9068 Q9Y5J1;B2RAX6;J3QR85;J3KSR7;J3QRG0 Q9Y5J1 397 414 UTP18 U3 small nucleolar RNA-associated protein 18 homolog yes no 2 0.016084 36.847 1 1.0123 1.2673 NaN 1 Median 1.0123 1.2673 NaN 1 0 Median NaN NaN NaN 0 0 Median 3352400 1523600 1828800 3352400 1523600 1828800 0 0 0 3022 968 3306 5003 8067 8067 1 VYENYPTYDLTERK SANLEEVTMKQICKKVYENYPTYDLTERKD KVYENYPTYDLTERKDFIKTTVKELIS___ K V Y R K D 0 1 1 1 0 0 2 0 0 0 1 1 0 0 1 0 2 0 3 1 0 0 14 1 1789.8523 P35659;B4DFG0;B4DNW3;H0Y993;Q6MZJ9 P35659 350 363 DEK;DKFZp686A24118 Protein DEK yes no 3 0.0004896 48.177 1 0.50204 0.76945 NaN 1 Median NaN NaN NaN 0 0 Median 0.50204 0.76945 NaN 1 0 Median 31416000 20779000 10637000 0 0 0 31416000 20779000 10637000 3023 754 3307 5004 8068;8069 8069 2 VYLHLR GKQYVERHFNKTGQRVYLHLRRTRRPKEED RHFNKTGQRVYLHLRRTRRPKEEDPATGTG R V Y L R R 0 1 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 1 1 0 0 6 0 799.47046 F5H571;A0A088QF11;A0A088QCU6;A0A024R798;A0A024R7D2;A0A140VJZ1;Q8IWA5;P45974 F5H571 69 74 USP5;SLC44A2 Choline transporter-like protein 2;Ubiquitin carboxyl-terminal hydrolase 5 yes no 2 0.0024434 61.006 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 4091900 0 4091900 0 0 0 4091900 0 4091900 3024 89 3308 5005 8070 8070 1 VYLSDSDNNSLETGEILK VSLANGCGRKATRKRVYLSDSDNNSLETGE SDSDNNSLETGEILKARAGNNRKVLRKCAA R V Y L K A 0 0 2 2 0 0 2 1 0 1 3 1 0 0 0 3 1 0 1 1 0 0 18 0 1995.9637 Q9NSI6 Q9NSI6 1602 1619 BRWD1 Bromodomain and WD repeat-containing protein 1 yes yes 2 3.5037E-10 75.479 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3025 938 3309;3310 5006;5007 8071;8072;8073 8072 1663;1664;1665 0 VYNVTQHAVGIVVNK QKGMPHKCYHGKTGRVYNVTQHAVGIVVNK VYNVTQHAVGIVVNKQVKGKILAKRINVRI R V Y N K Q 1 0 2 0 0 1 0 1 1 1 0 1 0 0 0 0 1 0 1 5 0 0 15 0 1639.9046 Q6IAX2;P46778;Q59GK9;M0R181;G3V1B3 Q6IAX2 64 78 RPL21 60S ribosomal protein L21 yes no 2;3 2.0981E-09 95.264 1 2 0.58376 0.73125 14.938 3 Median 0.74227 0.91388 NaN 1 0 Median 0.55761 0.70937 4.2971 2 0 Median 65304000 39466000 25838000 12106000 6730400 5375400 53198000 32735000 20463000 3026 764 3311 5008;5009;5010 8074;8075;8076;8077 8075 4 VYNYNHLMPTR KKKIAKRSKIKSFVKVYNYNHLMPTRYSVD SFVKVYNYNHLMPTRYSVDIPLDKTVVNKD K V Y T R Y 0 1 2 0 0 0 0 0 1 0 1 0 1 0 1 0 1 0 2 1 0 0 11 0 1406.6765 E4W6B6;B2R4D8;A0A024R1V4;K7ELC7;P61353;K7EQQ9 E4W6B6 74 84 RPL27 60S ribosomal protein L27 yes no 3 0.0018828 60.598 1 0.41061 0.55492 NaN 1 Median NaN NaN NaN 0 0 Median 0.41061 0.55492 NaN 1 0 Median 34706000 24779000 9927200 0 0 0 34706000 24779000 9927200 3027 37 3312 5011 8078;8079 8079 5 2 WELLQQVDTSTR KVRFLEQQNQVLQTKWELLQQVDTSTRTHN QTKWELLQQVDTSTRTHNLEPYFESFINNL K W E T R T 0 1 0 1 0 2 1 0 0 0 2 0 0 0 0 1 2 1 0 1 0 0 12 0 1474.7416 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;H6VRG2;H6VRF9;CON__P04264 H6VRG3 212 223 KRT1 Keratin, type II cytoskeletal 1 yes no 2 9.2102E-06 76.143 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 45877000 45877000 0 0 0 0 45877000 45877000 0 + 3028 670 3313 5012 8080;8081 8081 2 WGRDDIENIAR WNKRDFNQFIKANEKWGRDDIENIAREVEG ANEKWGRDDIENIAREVEGKTPEEVIEYSA K W G A R E 1 2 1 2 0 0 1 1 0 2 0 0 0 0 0 0 0 1 0 0 0 0 11 1 1343.6582 B7ZAX9;B4DZC0;O60264 B7ZAX9 803 813 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes no 3 4.5399E-29 106.29 1 1.6188 2.7309 NaN 1 Median NaN NaN NaN 0 0 Median 1.6188 2.7309 NaN 1 0 Median 24560000 9157600 15402000 0 0 0 24560000 9157600 15402000 3029 510 3314 5013 8082 8082 1 WKDSDEADLVLAK IGATDSSGELMFLMKWKDSDEADLVLAKEA MKWKDSDEADLVLAKEANMKCPQIVIAFYE K W K A K E 2 0 0 3 0 0 1 0 0 0 2 2 0 0 0 1 0 1 0 1 0 0 13 1 1488.746 A4D177;Q13185 A4D177 142 154 CBX3 Chromobox protein homolog 3 yes no 3 0.021844 25.53 1 0.45545 0.54718 NaN 1 Median NaN NaN NaN 0 0 Median 0.45545 0.54718 NaN 1 0 Median 5836200 4039300 1796900 0 0 0 5836200 4039300 1796900 3030 309 3315 5014 8083 8083 1 WKDTDEADLVLAK IGATDSCGDLMFLMKWKDTDEADLVLAKEA MKWKDTDEADLVLAKEANVKCPQIVIAFYE K W K A K E 2 0 0 3 0 0 1 0 0 0 2 2 0 0 0 0 1 1 0 1 0 0 13 1 1502.7617 V9HWG0;P45973 V9HWG0 142 154 HEL25;CBX5 Chromobox protein homolog 5 yes no 3 0.0056951 30.484 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2780000 2780000 0 0 0 0 2780000 2780000 0 3031 761 3316 5015 8084 8084 1 WLDESDAEMELR KQEKRPLFLAPDFDRWLDESDAEMELRAKE FDRWLDESDAEMELRAKEEERLNKLRLESE R W L L R A 1 1 0 2 0 0 3 0 0 0 2 0 1 0 0 1 0 1 0 0 0 0 12 0 1492.6504 H3BPZ1;H3BS72;Q9P035 H3BPZ1 85 96 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes no 2 0.0061921 49.483 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3032 664 3317 5016 8085 8085 139 989 0 WLEASEEER SAFVPPEEPPLQPARWLEASEEERQVGLRL PLQPARWLEASEEERQVGLRLRICHGKPVT R W L E R Q 1 1 0 0 0 0 4 0 0 0 1 0 0 0 0 1 0 1 0 0 0 0 9 0 1147.5146 B2RDN4;A8K3R2;Q14137;B4DEN9;Q6DKJ9;Q4G0D9 B2RDN4 515 523 BOP1 Ribosome biogenesis protein BOP1 yes no 2 0.022526 44.753 1 0.57759 0.7632 NaN 1 Median NaN NaN NaN 0 0 Median 0.57759 0.7632 NaN 1 0 Median 6087700 3763700 2324100 0 0 0 6087700 3763700 2324100 3033 349 3318 5017 8086 8086 1 WQDIQNDPR DYWLLAGIINHGYARWQDIQNDPRYAILNE NHGYARWQDIQNDPRYAILNEPFKGEMNRG R W Q P R Y 0 1 1 2 0 2 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 9 0 1170.5418 B3KY63;F5GWX5;A0A0C4DGG9;Q14839;Q8TDI0;Q6ZU36 B3KY63 1723 1731 CHD4;CHD5 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 5 yes no 2 0.0078957 53.493 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1719600 0 1719600 0 0 0 1719600 0 1719600 3034 244 3319 5018 8087 8087 1 WQNNLLPSR VISPRFDVQLKDLEKWQNNLLPSRQFGIYT LKDLEKWQNNLLPSRQFGIYTLQIMRLVPW K W Q S R Q 0 1 2 0 0 1 0 0 0 0 2 0 0 0 1 1 0 1 0 0 0 0 9 0 1126.5883 H3BVC7;I3L3P7;B2R4W8;A8K7H3;P62244 H3BVC7 19 27 RPS15A;hCG_1994130 40S ribosomal protein S15a yes no 2 0.00060035 85.666 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3035 369 3320 5019 8088 8088 1 YALTGDEVKK RECLPLIIFLRNRLKYALTGDEVKKICMQR RNRLKYALTGDEVKKICMQRFIKIDGKVRT K Y A K K I 1 0 0 1 0 0 1 1 0 0 1 2 0 0 0 0 1 0 1 1 0 0 10 1 1122.5921 Q96IR1;B2R491;P62701;Q53HV1;C9JEH7;A4FU11;Q496E4;Q8TD47;P22090;Q53HI6;B7Z1M6 Q96IR1 34 43 RPS4X;RPS4Y1;RPS4Y2 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 yes no 3 0.023305 20.13 1 0.36356 0.45044 NaN 1 Median NaN NaN NaN 0 0 Median 0.36356 0.45044 NaN 1 0 Median 10645000 8002600 2642500 0 0 0 10645000 8002600 2642500 3036 396 3321 5020 8089 8089 1 YCHDLGER KTARIFTHHLCRARRYCHDLGERAGALHAQ HLCRARRYCHDLGERAGALHAQVERLVQQA R Y C E R A 0 1 0 1 1 0 1 1 1 0 1 0 0 0 0 0 0 0 1 0 0 0 8 0 1048.4396 Q9BQG0;I3L1L3 Q9BQG0 889 896 MYBBP1A Myb-binding protein 1A yes no 3 0.022591 32.415 1 0.62639 0.83854 NaN 1 Median NaN NaN NaN 0 0 Median 0.62639 0.83854 NaN 1 0 Median 7604000 4489200 3114800 0 0 0 7604000 4489200 3114800 3037 914 3322 5021 8090 8090 1 YDAFGEDSSSAMGVENR KISRMLAAKTVLAIRYDAFGEDSSSAMGVE AFGEDSSSAMGVENRAKLEARLRTLEDRGI R Y D N R A 2 1 1 2 0 0 2 2 0 0 0 0 1 1 0 3 0 0 1 1 0 0 17 0 1833.7476 Q9Y2X3;B3KN82 Q9Y2X3 372 388 NOP58 Nucleolar protein 58 yes no 2 1.4634E-19 108.17 1 0.44179 0.57367 NaN 1 Median NaN NaN NaN 0 0 Median 0.44179 0.57367 NaN 1 0 Median 22395000 14341000 8053500 0 0 0 22395000 14341000 8053500 3038 964 3323 5022 8091 8091 230 1 YDEIRR LAKLVEAIRTNYNDRYDEIRRHWGGNVLGP AIRTNYNDRYDEIRRHWGGNVLGPKSVARI R Y D R R H 0 2 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 6 1 850.42972 P62424;Q9BY74;Q5T8U2 P62424 230 235 RPL7A;RP-L7a 60S ribosomal protein L7a yes no 2 0.025165 50.539 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 7590600 7590600 0 0 0 0 7590600 7590600 0 3039 789 3324 5023 8092 8092 1 YDGIILPGK HRISKEEAMRWFQQKYDGIILPGK______ RWFQQKYDGIILPGK_______________ K Y D G K - 0 0 0 1 0 0 0 2 0 2 1 1 0 0 1 0 0 0 1 0 0 0 9 0 974.54368 Q08ES8;Q5VVD0;P62913 Q08ES8 169 177 RPL11 60S ribosomal protein L11 yes no 2 0.0069817 60.436 1 0.6323 0.83455 NaN 1 Median NaN NaN NaN 0 0 Median 0.6323 0.83455 NaN 1 0 Median 14071000 7732100 6339100 0 0 0 14071000 7732100 6339100 3040 791 3325 5024 8093;8094 8093 2 YEDEINKR ELKNMQDMVEDYRNKYEDEINKRTNAENEF VEDYRNKYEDEINKRTNAENEFVTIKKDVD K Y E K R T 0 1 1 1 0 0 2 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 8 1 1065.5091 CON__P05787;P05787;Q969I0;F8VUG2;F8W1U3;CON__Q8VED5;Q147W7;Q0IIN1;CON__Q7Z794;Q7Z794;CON__P13647;P13647;B4E1T1;B4DL32;B4DRR0;B4DRU6;CON__P48668;CON__P04259;CON__P02538;A8K2I0;A0A0S2Z428;P48668;P02538;F8W0C6;B4DWU6;B2R853;CON__O95678;O95678;H0YIN9;CON__Q5XQN5;CON__Q922U2;CON__P50446;CON__Q8BGZ7;H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;H6VRG2;H6VRF9;CON__P04264;CON__H-INV:HIT000016045;F8VP67;CON__Q6IFZ6;CON__P35908;P35908 H6VRG3 270 277 KRT8;KRT1B;KRT77;KRT5;KRT6C;KRT6A;KRT75;KRT1;KRT2 Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 1b;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 2 epidermal no no 2;3 9.4211E-05 77.923 1 2 0.024543 0.037871 NaN 1 Median NaN NaN NaN 0 0 Median 0.024543 0.037871 NaN 1 0 Median 69424000 68146000 1278000 1424200 1424200 0 68000000 66722000 1278000 + 3041 670;584;580;575;583 3326 5025;5026;5027 8095;8096;8097;8098 8095 4 YEDGIEVNQEIVVITTK AICYGAKIMLPGVLRYEDGIEVNQEIVVIT DGIEVNQEIVVITTKGEAICMAIALMTTAV R Y E T K G 0 0 1 1 0 1 3 1 0 3 0 1 0 0 0 0 2 0 1 3 0 0 17 0 1948.9993 O60832;H7C2Q2 O60832 323 339 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes no 2 7.1309E-08 84.365 2 1 0.69786 0.86631 18.544 3 Median 0.71274 0.86979 0.56791 2 0 Median 0.50146 0.6309 NaN 1 0 Median 85496000 53380000 32116000 25377000 14150000 11226000 60119000 39230000 20889000 3042 706 3327 5028;5029;5030 8099;8100;8101;8102;8103 8102 5 YEELQITAGR AQKSKAEAESLYQSKYEELQITAGRHGDSV LYQSKYEELQITAGRHGDSVRNSKIEISEL K Y E G R H 1 1 0 0 0 1 2 1 0 1 1 0 0 0 0 0 1 0 1 0 0 0 10 0 1178.5932 H6VRG3;H6VRG0;H6VRF8;H6VRG1;P04264;H6VRG2;H6VRF9;CON__P04264 H6VRG3 377 386 KRT1 Keratin, type II cytoskeletal 1 no no 2 1.0965E-18 101.9 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 43072000 43072000 0 1716400 1716400 0 41355000 41355000 0 + 3043 670 3328 5031;5032 8104;8105 8105 2 YEFSNK DFNLDKTLYFFIAGRYEFSNKGADVFLEAL TLYFFIAGRYEFSNKGADVFLEALARLNYL R Y E N K G 0 0 1 0 0 0 1 0 0 0 0 1 0 1 0 1 0 0 1 0 0 0 6 0 786.35482 B7Z806;B7Z6I6;Q53ER0;A8K6K7;P13807;A0A024RAU5;P54840 B7Z806 252 257 GYS1;GYS2 Glycogen [starch] synthase, muscle;Glycogen [starch] synthase, liver yes no 2 0.019509 52.683 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2032900 2032900 0 0 0 0 2032900 2032900 0 3044 364 3329 5033 8106 8106 1 YEITEQRK PRHQEGEIFDTEKEKYEITEQRKIDQKAVD FDTEKEKYEITEQRKIDQKAVDSQILPKIK K Y E R K I 0 1 0 0 0 1 2 0 0 1 0 1 0 0 0 0 1 0 1 0 0 0 8 1 1065.5455 Q8TBK5;Q8N5Z7;A0A024RBK3;Q02878;B4DRX3;B2R4K7;Q9HBB3 Q8TBK5 240 247 RPL6 60S ribosomal protein L6 yes no 3 0.014939 27.254 1 0.69714 0.92337 NaN 1 Median NaN NaN NaN 0 0 Median 0.69714 0.92337 NaN 1 0 Median 8839700 3840000 4999700 0 0 0 8839700 3840000 4999700 3045 146 3330 5034 8107 8107 1 YELGRPAANTK RKTGGKRKPYHKKRKYELGRPAANTKIGPR KKRKYELGRPAANTKIGPRRIHTVRVRGGC K Y E T K I 2 1 1 0 0 0 1 1 0 0 1 1 0 0 1 0 1 0 1 0 0 0 11 1 1218.6357 Q5JR95;Q5JR94;P62241 Q5JR95 27 37 RPS8 40S ribosomal protein S8 yes no 2;3 0.0033137 58.63 2 0.27456 0.43108 0.92039 2 Median NaN NaN NaN 0 0 Median 0.27456 0.43108 0.92039 2 0 Median 191390000 149060000 42333000 0 0 0 191390000 149060000 42333000 3046 785 3331 5035;5036 8108;8109 8108 2 YELLEHK RARLPEELRSLVQKRYELLEHKKRWASMSE LRSLVQKRYELLEHKKRWASMSEEQRKEYL R Y E H K K 0 0 0 0 0 0 2 0 1 0 2 1 0 0 0 0 0 0 1 0 0 0 7 0 930.48108 Q9UIG0 Q9UIG0 526 532 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 2 0.019965 50.127 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 4229000 0 4229000 0 0 0 4229000 0 4229000 3047 952 3332 5037 8110 8110 1 YELVTELNDSRSECITATR LNELEKICEILQAEKYELVTELNDSRSECI TELNDSRSECITATRKMAEEVGKLLNEVKI K Y E T R K 1 2 1 1 1 0 3 0 0 1 2 0 0 0 0 2 3 0 1 1 0 0 19 1 2256.0692 P49454 P49454 1315 1333 CENPF Centromere protein F yes yes 3 9.0011E-05 42.612 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3048 768 3333 5038 8111 8111 1984;1985 0 YENESLQNGRK LKHGDVITIIDRSFRYENESLQNGRKSTEF RSFRYENESLQNGRKSTEFPRKIREQEPAR R Y E R K S 0 1 2 0 0 1 2 1 0 0 1 1 0 0 0 1 0 0 1 0 0 0 11 1 1336.6371 P46013;Q70L73 P46013 97 107 MKI67 Antigen KI-67 no no 3 0.0053518 34.773 1 0.88641 1.1118 NaN 1 Median NaN NaN NaN 0 0 Median 0.88641 1.1118 NaN 1 0 Median 4800400 2340200 2460200 0 0 0 4800400 2340200 2460200 3049 762;865 3334 5039 8112 8112 1 YENEVALR QIDNARLAADDFRLKYENEVALRQSVEADI ADDFRLKYENEVALRQSVEADINGLRRVLD K Y E L R Q 1 1 1 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 8 0 992.49271 CON__P13645;P13645 CON__P13645 238 245 KRT10 Keratin, type I cytoskeletal 10 yes no 2 8.4534E-05 74.127 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 11396000 11396000 0 0 0 0 11396000 11396000 0 + 3050 579 3335 5040 8113 8113 1 YETELAMR QIDNARLAADDFRVKYETELAMRQSVENDI ADDFRVKYETELAMRQSVENDIHGLRKVID K Y E M R Q 1 1 0 0 0 0 2 0 0 0 1 0 1 0 0 0 1 0 1 0 0 0 8 0 1011.4695 F8VZY9;B2RA03;A0A024RAY2;P05783;I6L965;CON__P05784 F8VZY9 168 175 KRT18 Keratin, type I cytoskeletal 18 yes no 2 0.0071179 75.854 1 1.7358 2.215 NaN 1 Median NaN NaN NaN 0 0 Median 1.7358 2.215 NaN 1 0 Median 4738600 1929000 2809600 0 0 0 4738600 1929000 2809600 3051 134 3336 5041 8114 8114 28 1 YFATVSGSASEANVEEK ESGAGKTVSAKYAMRYFATVSGSASEANVE ATVSGSASEANVEEKVLASNPIMESIGNAK R Y F E K V 3 0 1 0 0 0 3 1 0 0 0 1 0 1 0 3 1 0 1 2 0 0 17 0 1787.8214 A8CDT9;A0A087WY00;G3V394;F8WE88;F8W6H6;Q9Y4I1;B4E147 A8CDT9 179 195 MYO5A Unconventional myosin-Va yes no 2 8.8719E-08 73.466 1 1.2564 1.5175 NaN 1 Median 1.2564 1.5175 NaN 1 0 Median NaN NaN NaN 0 0 Median 3351200 1690300 1660900 3351200 1690300 1660900 0 0 0 3052 196 3337 5042 8115;8116 8115 2 YFQISQDEDESESED WLRVVASDKETYELRYFQISQDEDESESED YFQISQDEDESESED_______________ R Y F E D - 0 0 0 3 0 2 4 0 0 1 0 0 0 1 0 3 0 0 1 0 0 0 15 0 1819.6908 C9JYQ9;H0Y8C2;Q6P5R6 C9JYQ9 107 121 RPL22L1 60S ribosomal protein L22-like 1 yes no 2 1.4324E-10 66.706 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3053 566 3338 5043 8117 8117 849 0 YFQSPSR ASLRRSRSGSIKGSRYFQSPSRSRSRSRSI SGSIKGSRYFQSPSRSRSRSRSISRPRSSR R Y F S R S 0 1 0 0 0 1 0 0 0 0 0 0 0 1 1 2 0 0 1 0 0 0 7 0 883.41882 Q16629;H7BZZ6 Q16629 189 195 SRSF7 Serine/arginine-rich splicing factor 7 yes no 2 0.0085532 84.213 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3054 828 3339 5044;5045 8118;8119;8120 8119 1366;1367 0 YGDGPRPPK RPSAAGINLMIGSTRYGDGPRPPKMARYDN MIGSTRYGDGPRPPKMARYDNGSGYRRGGS R Y G P K M 0 1 0 1 0 0 0 2 0 0 0 1 0 0 3 0 0 0 1 0 0 0 9 1 985.49813 Q08211;B3KU66 Q08211 1155 1163 DHX9 ATP-dependent RNA helicase A yes no 2 0.026632 37.812 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3055 802 3340 5046 8121 8121 1 YGEYFPGTGDLR AFYTTDRVMTVSFHKYGEYFPGTGDLRDIG FHKYGEYFPGTGDLRDIGAGKGKYYAVNYP K Y G L R D 0 1 0 1 0 0 1 3 0 0 1 0 0 1 1 0 1 0 2 0 0 0 12 0 1373.6252 Q6IT96;B5BU61;Q13547;B4DRG0;B7Z3S4;Q5TEE2;B4DSK9;B3KUJ5;Q92769 Q6IT96 201 212 HDAC1;HDAC2 Histone deacetylase;Histone deacetylase 1;Histone deacetylase 2 no no 2 0.010513 50.292 1 0.90595 1.2169 NaN 1 Median NaN NaN NaN 0 0 Median 0.90595 1.2169 NaN 1 0 Median 8143700 3879900 4263700 0 0 0 8143700 3879900 4263700 3056 528;447 3341 5047 8122 8122 1 YGLIYHASLVGQTSPK KALFRALKSRRDTPKYGLIYHASLVGQTSP GLIYHASLVGQTSPKHKGKISRMLAAKTVL K Y G P K H 1 0 0 0 0 1 0 2 1 1 2 1 0 0 1 2 1 0 2 1 0 0 16 0 1732.9148 Q9Y2X3;B3KN82 Q9Y2X3 338 353 NOP58 Nucleolar protein 58 yes no 3 0.0076893 30.974 1 0.42693 0.55767 NaN 1 Median NaN NaN NaN 0 0 Median 0.42693 0.55767 NaN 1 0 Median 6645700 3664200 2981500 0 0 0 6645700 3664200 2981500 3057 964 3342 5048 8123 8123 0 YGSDIVPFSK DETEVLKEDIIQGFRYGSDIVPFSKVDEEQ IQGFRYGSDIVPFSKVDEEQMKYKSEGKCF R Y G S K V 0 0 0 1 0 0 0 1 0 1 0 1 0 1 1 2 0 0 1 1 0 0 10 0 1111.555 Q53T09;P13010 Q53T09 152 161 XRCC5 X-ray repair cross-complementing protein 5 yes no 2 0.010071 51.872 1 0.66304 0.87255 NaN 1 Median NaN NaN NaN 0 0 Median 0.66304 0.87255 NaN 1 0 Median 6335500 4084400 2251000 0 0 0 6335500 4084400 2251000 3058 735 3343 5049 8124 8124 1 YGSFEEAEASYPILNR ESKRALTGRDSGMEKYGSFEEAEASYPILN GSFEEAEASYPILNRAREGDSHKESKYAVP K Y G N R A 2 1 1 0 0 0 3 1 0 1 1 0 0 1 1 2 0 0 2 0 0 0 16 0 1844.8581 O95425 O95425 966 981 SVIL Supervillin yes yes 2 1.2428E-09 96.673 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3059 719 3344 5050 8125;8126 8126 1102 0 YHDIEPGAVVK LLSLRTSIIEAQYLRYHDIEPGAVVKGTVL QYLRYHDIEPGAVVKGTVLTIKSYGMLVKV R Y H V K G 1 0 0 1 0 0 1 1 1 1 0 1 0 0 1 0 0 0 1 2 0 0 11 0 1226.6295 Q14690;B4DH82;B4DES7 Q14690 447 457 PDCD11 Protein RRP5 homolog yes no 2 0.0025495 79.489 1 0.73522 0.9688 NaN 1 Median NaN NaN NaN 0 0 Median 0.73522 0.9688 NaN 1 0 Median 14873000 7509500 7363700 0 0 0 14873000 7509500 7363700 3060 816 3345 5051 8127 8127 1 YHIGDEVK PMHLADILMKNPEKKYHIGDEVKCRVLLCD MKNPEKKYHIGDEVKCRVLLCDPEAKKLMM K Y H V K C 0 0 0 1 0 0 1 1 1 1 0 1 0 0 0 0 0 0 1 1 0 0 8 0 959.47125 Q14690;B4DH82;B4DES7 Q14690 497 504 PDCD11 Protein RRP5 homolog yes no 2 0.014062 66.073 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3061 816 3346 5052 8128 8128 1 YHPGYFGK GNAGGLHHHRINFDKYHPGYFGKVGMKHYH HRINFDKYHPGYFGKVGMKHYHLKRNQSFC K Y H G K V 0 0 0 0 0 0 0 2 1 0 0 1 0 1 1 0 0 0 2 0 0 0 8 0 967.4552 Q9BQQ5;E9PLL6;Q6NZ52;P46776 Q9BQQ5 48 55 L27a;RPL27A 60S ribosomal protein L27a yes no 2 0.006787 69.383 1 4 0.24312 0.30612 60.341 4 Median 0.82415 1.0184 NaN 1 0 Median 0.24333 0.30634 0.9259 3 0 Plateau 197150000 156690000 40460000 23462000 13150000 10312000 173690000 143540000 30148000 3062 626 3347 5053;5054;5055;5056;5057 8129;8130;8131;8132;8133;8134;8135;8136;8137;8138;8139 8139 11 YHSDDYIK EIYRPHKANAEEMTKYHSDDYIKFLRSIRP NAEEMTKYHSDDYIKFLRSIRPDNMSEYSK K Y H I K F 0 0 0 2 0 0 0 0 1 1 0 1 0 0 0 1 0 0 2 0 0 0 8 0 1039.4611 Q6IT96;B5BU61;Q13547;B7Z3S4;Q5TEE2;B4DSK9 Q6IT96 67 74 HDAC1 Histone deacetylase;Histone deacetylase 1 yes no 2 2.5411E-12 109.36 1 1.0323 1.2973 NaN 1 Median NaN NaN NaN 0 0 Median 1.0323 1.2973 NaN 1 0 Median 51481000 24633000 26848000 0 0 0 51481000 24633000 26848000 3063 528 3348 5058 8140;8141 8141 2 YHSDEYIK EIYRPHKATAEEMTKYHSDEYIKFLRSIRP TAEEMTKYHSDEYIKFLRSIRPDNMSEYSK K Y H I K F 0 0 0 1 0 0 1 0 1 1 0 1 0 0 0 1 0 0 2 0 0 0 8 0 1053.4767 B3KUJ5;Q92769;E5RK19;E5RFI6;E5RJ04;E5RGV4;E5RHE7;E5RH52;E5RG37;E5RFP9;H3BM24 B3KUJ5 38 45 HDAC2 Histone deacetylase;Histone deacetylase 2 yes no 2 5.7005E-19 117.1 1 1.0585 1.3348 NaN 1 Median NaN NaN NaN 0 0 Median 1.0585 1.3348 NaN 1 0 Median 83700000 39347000 44354000 0 0 0 83700000 39347000 44354000 3064 447 3349 5059 8142;8143 8143 2 YHTSQSGDEMTSLSEYVSR HEDSTNRRRLSELLRYHTSQSGDEMTSLSE QSGDEMTSLSEYVSRMKETQKSIYYITGES R Y H S R M 0 1 0 1 0 1 2 1 1 0 1 0 1 0 0 5 2 0 2 1 0 0 19 0 2175.9379 A0A024RD80;P08238;B4DMA2;B4DGL0;Q9H6X9;A8K3W9 A0A024RD80 457 475 HSP90AB1 Heat shock protein HSP 90-beta yes no 3 1.9706E-11 66.325 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 6597100 6597100 0 6597100 6597100 0 0 0 0 3065 167 3350 5060 8144 8144 37 1 YHVVSGADDYTVK GHTKAVHTVDFTADKYHVVSGADDYTVKLW DKYHVVSGADDYTVKLWDIPNSKEILTFKE K Y H V K L 1 0 0 2 0 0 0 1 1 0 0 1 0 0 0 1 1 0 2 3 0 0 13 0 1452.6885 H0Y8P4;Q8TED0 H0Y8P4 162 174 UTP15 U3 small nucleolar RNA-associated protein 15 homolog yes no 2 0.0081324 53.237 1 0.63906 0.79914 NaN 1 Median NaN NaN NaN 0 0 Median 0.63906 0.79914 NaN 1 0 Median 38637000 22578000 16059000 0 0 0 38637000 22578000 16059000 3066 651 3351 5061 8145;8146 8146 2 YIASVQGSTPSPR ______________________________ ERYIASVQGSTPSPRQKSMKGFYFAKLYYE R Y I P R Q 1 1 0 0 0 1 0 1 0 1 0 0 0 0 2 3 1 0 1 1 0 0 13 0 1361.6939 P49792;D3DX73;F8WBP7 P49792 11 23 RANBP2;hCG_1994636 E3 SUMO-protein ligase RanBP2 yes no 2 3.2635E-42 129.77 2 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3067 769 3352;3353 5062;5063;5064;5065 8147;8148;8149;8150 8147 1247;1986 0 YIEIDSDEEPRGELLSLR RKELDAAPGKSQKRKYIEIDSDEEPRGELL IDSDEEPRGELLSLRDIERLHKKPKSDKET K Y I L R D 0 2 0 2 0 0 4 1 0 2 3 0 0 0 1 2 0 0 1 0 0 0 18 1 2133.059 E7EW05;B4DT66;Q9NVU7 E7EW05 543 560 SDAD1 Protein SDA1 homolog yes no 3 9.6651E-07 55.588 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3068 496 3354 5066;5067 8151;8152 8151 729 0 YIEIFK AEKALKKHKERIGHRYIEIFKSSRAEVRTH KHKERIGHRYIEIFKSSRAEVRTHYDPPRK R Y I F K S 0 0 0 0 0 0 1 0 0 2 0 1 0 1 0 0 0 0 1 0 0 0 6 0 811.44799 E9PCY7;G8JLB6;P31943;D6RBM0;E5RGV0;E7EN40;Q68DG4;H0YB39;P55795;B4DP00;B4DFK9 E9PCY7 180 185 HNRNPH1;DKFZp686A15170;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 no no 2 0.027375 50.12 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2475900 0 2475900 0 0 0 2475900 0 2475900 3069 614;780 3355 5068 8153 8153 1 YIQDFQR LSKKYKELPEKKKMKYIQDFQREKQEFERN LPEKKKMKYIQDFQREKQEFERNLARFRED K Y I Q R E 0 1 0 1 0 2 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 7 0 968.47158 B4DNQ1;E9PKP7;A8K962;P17480;O00164;Q05BZ1;E9PMM2 B4DNQ1 95 101 UBTF Nucleolar transcription factor 1 yes no 2 0.021692 49.59 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 4414500 0 4414500 0 0 0 4414500 0 4414500 3070 376 3356 5069 8154 8154 1 YIQELWR ______________________________ ______________________________ K Y I W R K 0 1 0 0 0 1 1 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 7 0 1006.5236 A0A024R2Q4;P61313;B4DLP4;E7EQV9;E7ENU7;E7EX53;B4DEN1;E7ERA2 A0A024R2Q4 6 12 RPL15 Ribosomal protein L15;60S ribosomal protein L15 yes no 2 0.0016441 94.262 1 0.55022 0.73691 NaN 1 Median NaN NaN NaN 0 0 Median 0.55022 0.73691 NaN 1 0 Median 9471900 5942500 3529300 0 0 0 9471900 5942500 3529300 3071 50 3357 5070 8155;8156 8156 2 YKAEDEVQR LSKEEIERMVQEAEKYKAEDEVQRERVSAK VQEAEKYKAEDEVQRERVSAKNALESYAFN K Y K Q R E 1 1 0 1 0 1 2 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 9 1 1136.5462 B4DFN9;B4DI39;B4DWK5;A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4E1T6;B4DNX1;V9GZ37;B3KTT5;B4DVU9;B4E1S9;B4E388;B4DNT8;Q53FA3;B2RCQ9;B4DI54;P34931 B4DFN9 456 464 HEL-S-103;HSPA1B;HSPA1A;HSPA1L Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1-like yes no 2 0.0017222 82.645 1 1.2158 1.5852 NaN 1 Median NaN NaN NaN 0 0 Median 1.2158 1.5852 NaN 1 0 Median 7079000 2452500 4626400 0 0 0 7079000 2452500 4626400 3072 256 3358 5071 8157 8157 1 YKAEDEVQRER LSKEEIERMVQEAEKYKAEDEVQRERVSAK EAEKYKAEDEVQRERVSAKNALESYAFNMK K Y K E R V 1 2 0 1 0 1 3 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 11 2 1421.6899 B4DFN9;B4DI39;B4DWK5;A8K5I0;A0A0G2JIW1;Q59EJ3;P0DMV9;P0DMV8;B4E1T6;B4DNX1;V9GZ37;B3KTT5;B4DVU9;B4E1S9;B4E388;B4DNT8 B4DFN9 456 466 HEL-S-103;HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 3 0.014871 30.872 1 0.66656 0.79281 NaN 1 Median 0.66656 0.79281 NaN 1 0 Median NaN NaN NaN 0 0 Median 3690300 2322500 1367800 3690300 2322500 1367800 0 0 0 3073 256 3359 5072 8158 8158 1 YKDDPVDLR EMKSPREPGYKAEGKYKDDPVDLRLDIERR YKAEGKYKDDPVDLRLDIERRKKHKERDLK K Y K L R L 0 1 0 3 0 0 0 0 0 0 1 1 0 0 1 0 0 0 1 1 0 0 9 1 1119.556 Q9Y2W1 Q9Y2W1 710 718 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3 0.019153 30.612 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3074 963 3360 5073 8159 8159 1 YKEELIEK ERKAKSRQVGKEKGKYKEELIEKMQE____ VGKEKGKYKEELIEKMQE____________ K Y K E K M 0 0 0 0 0 0 3 0 0 1 1 2 0 0 0 0 0 0 1 0 0 0 8 1 1050.5597 Q9UNX3 Q9UNX3 135 142 RPL26L1 60S ribosomal protein L26-like 1 yes yes 2 0.0089201 74.376 1 0.35173 0.42484 NaN 1 Median NaN NaN NaN 0 0 Median 0.35173 0.42484 NaN 1 0 Median 44645000 32153000 12491000 0 0 0 44645000 32153000 12491000 3075 959 3361 5074 8160 8160 1 YKEETIEK ERKAKSRQVGKEKGKYKEETIEKMQD____ VGKEKGKYKEETIEKMQD____________ K Y K E K M 0 0 0 0 0 0 3 0 0 1 0 2 0 0 0 0 1 0 1 0 0 0 8 1 1038.5233 Q6IBH6;P61254;A0A024RBF6 Q6IBH6 135 142 RPL26;hCG_26523 60S ribosomal protein L26 yes no 2 4.5767E-27 121.64 1 0.35391 0.41817 NaN 1 Median NaN NaN NaN 0 0 Median 0.35391 0.41817 NaN 1 0 Median 172640000 128720000 43914000 0 0 0 172640000 128720000 43914000 3076 782 3362 5075 8161;8162 8162 2 YKPLDLRPK QTQKENLRKFYKGKKYKPLDLRPKKTRAMR FYKGKKYKPLDLRPKKTRAMRRRLNKHEEN K Y K P K K 0 1 0 1 0 0 0 0 0 0 2 2 0 0 2 0 0 0 1 0 0 0 9 2 1128.6655 P42766 P42766 78 86 RPL35 60S ribosomal protein L35 yes yes 2;3 0.0033609 42.109 2 2 0.44813 0.58518 65.455 4 Median 0.85207 1.0171 3.2531 2 0 Median 0.23132 0.32817 6.8745 2 0 Median 110950000 72092000 38863000 59354000 30543000 28811000 51600000 41549000 10052000 3077 760 3363 5076;5077;5078;5079 8163;8164;8165;8166;8167;8168;8169;8170 8165 8 YLDEDTIYHLQPSGR DALKEKVIKAVVPAKYLDEDTIYHLQPSGR YLDEDTIYHLQPSGRFVIGGPQGDAGLTGR K Y L G R F 0 1 0 2 0 1 1 1 1 1 2 0 0 0 1 1 1 0 2 0 0 0 15 0 1805.8584 B4DEX8;A0A140VJP5;P31153 B4DEX8 235 249 MAT2A S-adenosylmethionine synthase;S-adenosylmethionine synthase isoform type-2 yes no 3 0.0065848 34.82 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3183500 0 3183500 0 0 0 3183500 0 3183500 3078 279 3364 5080 8171 8171 1 YLLGDAPVSPSSQK LKDRYLKHLRGQEHKYLLGDAPVSPSSQKL KYLLGDAPVSPSSQKLKRKAEEDPEAADSG K Y L Q K L 1 0 0 1 0 1 0 1 0 0 2 1 0 0 2 3 0 0 1 1 0 0 14 0 1460.7511 Q9NYB0;H3BMI8 Q9NYB0 195 208 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 yes no 2 1.0009E-22 115.1 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3079 946 3365 5081;5082 8172;8173;8174;8175;8176;8177;8178;8179 8174 1682 0 YLLSQSSPAPLTAAEEELR FGTVKEDVSLHGYKKYLLSQSSPAPLTAAE QSSPAPLTAAEEELRQIKINEVQTDVGVDT K Y L L R Q 3 1 0 0 0 1 3 0 0 0 4 0 0 0 2 3 1 0 1 0 0 0 19 0 2074.0582 F8VS81;Q12792 F8VS81 175 193 TWF1 Twinfilin-1 yes no 2 6.7998E-11 80.469 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3080 635 3366 5083 8180;8181 8180 961;962 0 YLMEEDEDAYKK HRKHIMGQNVADYMRYLMEEDEDAYKKQFS YMRYLMEEDEDAYKKQFSQYIKNSVTPDMM R Y L K K Q 1 0 0 2 0 0 3 0 0 0 1 2 1 0 0 0 0 0 2 0 0 0 12 1 1532.6705 A2RUM7;Q59GX9;P46777;B3KTM6 A2RUM7 210 221 RPL5 60S ribosomal protein L5 yes no 2;3 3.5471E-21 114.24 2 0.56875 0.6897 0.82386 2 Median NaN NaN NaN 0 0 Median 0.56875 0.6897 0.82386 2 0 Median 113160000 68950000 44213000 0 0 0 113160000 68950000 44213000 3081 306 3367 5084;5085 8182;8183 8182 66 2 YLQDQLSPLTR ______________________________ QKVKYLQDQLSPLTRQREYQEKEIQRLNKA K Y L T R Q 0 1 0 1 0 2 0 0 0 0 3 0 0 0 1 1 1 0 1 0 0 0 11 0 1332.7038 H0YC17;E7EMV7;B7Z5B0;B7Z8K2;A0A0A0MRZ4;A4F1Y0;A8K4N4;Q15025 H0YC17 10 20 TNIP1;NAF1 TNFAIP3-interacting protein 1 yes no 2 2.8891E-05 94.122 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3082 218 3368 5086 8184 8184 303 0 YLSADSGDADDSDADLGSAVK NEEHNVETAEDSEIRYLSADSGDADDSDAD GDADDSDADLGSAVKQLQEFIPNIKDRATS R Y L V K Q 4 0 0 6 0 0 0 2 0 0 2 1 0 0 0 4 0 0 1 1 0 0 21 0 2070.8866 B4DZG2;A0A024R8C1;Q15361 B4DZG2 476 496 TTF1 Transcription termination factor 1 yes no 2 6.3238E-12 66.533 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3083 103 3369;3370 5087;5088;5089 8185;8186;8187 8185 148;149;150 0 YLVDGTKPNAGSEEISSEDDELVEEK VGLQEELLFQYPDTRYLVDGTKPNAGSEEI SEEISSEDDELVEEKKQQRRRVPAKRKLEM R Y L E K K 1 0 1 3 0 0 6 2 0 1 2 2 0 0 1 3 1 0 1 2 0 0 26 1 2852.3087 Q9NY61 Q9NY61 305 330 AATF Protein AATF yes yes 3 1.5724E-21 73.797 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3084 945 3371;3372 5090;5091;5092 8188;8189;8190 8190 1678;1679;1680 0 YLVDGTKPNAGSEEISSEDDELVEEKK VGLQEELLFQYPDTRYLVDGTKPNAGSEEI EEISSEDDELVEEKKQQRRRVPAKRKLEME R Y L K K Q 1 0 1 3 0 0 6 2 0 1 2 3 0 0 1 3 1 0 1 2 0 0 27 2 2980.4037 Q9NY61 Q9NY61 305 331 AATF Protein AATF yes yes 3 3.8877E-14 50.498 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3085 945 3373;3374 5093;5094 8191;8192 8192 1678;1679;1680 0 YLVIDEAHR MLIKEKSVFKKFNWRYLVIDEAHRTKNEKS KKFNWRYLVIDEAHRTKNEKSKLSEIVREF R Y L H R T 1 1 0 1 0 0 1 0 1 1 1 0 0 0 0 0 0 0 1 1 0 0 9 0 1114.5771 B7ZAX9;B4DZC0;O60264;Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370;D7EZH4;Q4W5H1 B7ZAX9 247 255 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 yes no 2 0.0010973 71.501 1 1.932 2.6466 NaN 1 Median NaN NaN NaN 0 0 Median 1.932 2.6466 NaN 1 0 Median 43785000 16043000 27742000 0 0 0 43785000 16043000 27742000 3086 510 3375 5095 8193;8194;8195 8194 3 YMNSDTTSPELR DDPVEAERWSDYVERYMNSDTTSPELREHL VERYMNSDTTSPELREHLAQKPVFLPRNLR R Y M L R E 0 1 1 1 0 0 1 0 0 0 1 0 1 0 1 2 2 0 1 0 0 0 12 0 1412.6242 B3KQE3;Q96ST3 B3KQE3 210 221 SIN3A Paired amphipathic helix protein Sin3a yes no 2 5.9349E-10 106.29 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3087 439 3376 5096 8196 8196 86 643 0 YMPQNPHIIATK CEIKINHEGEVNRARYMPQNPHIIATKTPS RARYMPQNPHIIATKTPSSDVLVFDYTKHP R Y M T K T 1 0 1 0 0 1 0 0 1 2 0 1 1 0 2 0 1 0 1 0 0 0 12 0 1411.7282 E9PC52;Q6FHQ0;Q16576;A8K6A2;Q5JP01 E9PC52 122 133 RBBP7 Histone-binding protein RBBP7 yes no 3 0.0018856 51.064 1 0.64525 0.80001 NaN 1 Median NaN NaN NaN 0 0 Median 0.64525 0.80001 NaN 1 0 Median 27940000 15910000 12031000 0 0 0 27940000 15910000 12031000 3088 612 3377 5097 8197;8198 8197 129 2 YNGLIHR YSTEPNNLKARNSFRYNGLIHRKTVGVEPA LKARNSFRYNGLIHRKTVGVEPAADGKGVV R Y N H R K 0 1 1 0 0 0 0 1 1 1 1 0 0 0 0 0 0 0 1 0 0 0 7 0 871.46644 H0YKD8;P46779;H0YLP6;Q59F34;H0YMF4 H0YKD8 40 46 RPL28 60S ribosomal protein L28 yes no 2 0.028592 62.714 1 1 0.68516 0.90408 8.3233 2 Median 0.76852 0.95888 NaN 1 0 Median 0.61084 0.8524 NaN 1 0 Median 78344000 48168000 30177000 2314300 1370200 944150 76030000 46798000 29233000 3089 656 3378 5098;5099 8199;8200 8199 2 YNGLIHRK YSTEPNNLKARNSFRYNGLIHRKTVGVEPA KARNSFRYNGLIHRKTVGVEPAADGKGVVV R Y N R K T 0 1 1 0 0 0 0 1 1 1 1 1 0 0 0 0 0 0 1 0 0 0 8 1 999.5614 H0YKD8;P46779;H0YLP6;Q59F34;H0YMF4 H0YKD8 40 47 RPL28 60S ribosomal protein L28 yes no 2 0.029671 46.426 1 0.85552 1.0835 NaN 1 Median 0.85552 1.0835 NaN 1 0 Median NaN NaN NaN 0 0 Median 6053600 3492700 2560900 6053600 3492700 2560900 0 0 0 3090 656 3379 5100 8201 8201 1 YNLDASEEEDSNK KLDEDEDEDDADLSKYNLDASEEEDSNKKK SKYNLDASEEEDSNKKKSNRRSRSKSRSSH K Y N N K K 1 0 2 2 0 0 3 0 0 0 1 1 0 0 0 2 0 0 1 0 0 0 13 0 1512.6216 O95218 O95218 183 195 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 2 0.00018657 82.925 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3091 715 3380 5101 8202 8202 1074 0 YNLSAGTIK TPLKSRKVIEQRCMRYNLSAGTIKAVTDFV EQRCMRYNLSAGTIKAVTDFVIPECQKKSP R Y N I K A 1 0 1 0 0 0 0 1 0 1 1 1 0 0 0 1 1 0 1 0 0 0 9 0 965.5182 Q6P0N0 Q6P0N0 668 676 MIS18BP1 Mis18-binding protein 1 yes yes 2 0.0026486 58.37 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3092 858 3381 5102 8203;8204 8204 1426 0 YPRPASVPPSPSLSR FTYEPNEADAAQGYRYPRPASVPPSPSLSR YPRPASVPPSPSLSRHSSPHQSEDEEDPRN R Y P S R H 1 2 0 0 0 0 0 0 0 0 1 0 0 0 5 4 0 0 1 1 0 0 15 1 1609.8576 B7Z806;B7Z6I6;Q53ER0;A8K6K7;P13807;B7Z255 B7Z806 556 570 GYS1 Glycogen [starch] synthase, muscle yes no 2 0.00033004 41.412 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3093 364 3382 5103 8205 8205 561;562 0 YQAQSSTEQTLLSPSEKPR LLQREVWCVGTNGKRYQAQSSTEQTLLSPS SSTEQTLLSPSEKPRRFGVYLDYEAGRLGF R Y Q P R R 1 1 0 0 0 3 2 0 0 0 2 1 0 0 2 4 2 0 1 0 0 0 19 1 2149.0651 Q9NT12;Q8WV44 Q9NT12 230 248 DKFZp434N1710;TRIM41 E3 ubiquitin-protein ligase TRIM41 yes no 3 0.0013695 42.322 2 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3094 893 3383 5104;5105 8206;8207 8207 1497 0 YQAVTATLEEK KFAYLGRLAHEVGWKYQAVTATLEEKRKEK VGWKYQAVTATLEEKRKEKAKIHYRKKKQL K Y Q E K R 2 0 0 0 0 1 2 0 0 0 1 1 0 0 0 0 2 0 1 1 0 0 11 0 1251.6347 Q9BSQ6;Q5QTS3;Q53H34;M0QYS1;P40429;Q8J015;Q6NVV1 Q9BSQ6 147 157 RPL13A;RPL13a;RPL13AP3 60S ribosomal protein L13a;Putative 60S ribosomal protein L13a protein RPL13AP3 yes no 2 0.00094315 90.108 1 0.72286 0.9055 NaN 1 Median 0.72286 0.9055 NaN 1 0 Median NaN NaN NaN 0 0 Median 15923000 9187900 6735500 15923000 9187900 6735500 0 0 0 3095 691 3384 5106 8208;8209 8209 2 YQILPLHSQIPR MQKHLEMNPHFGSHRYQILPLHSQIPREEQ SHRYQILPLHSQIPREEQRKVFDPVPVGVT R Y Q P R E 0 1 0 0 0 2 0 0 1 2 2 0 0 0 2 1 0 0 1 0 0 0 12 0 1463.8249 Q08211 Q08211 681 692 DHX9 ATP-dependent RNA helicase A yes yes 3 0.0089018 35.204 1 0.49921 0.62059 NaN 1 Median NaN NaN NaN 0 0 Median 0.49921 0.62059 NaN 1 0 Median 4145800 2448300 1697600 0 0 0 4145800 2448300 1697600 3096 802 3385 5107 8210 8210 0 YQKSTELLIR HRYRPGTVALREIRRYQKSTELLIRKLPFQ REIRRYQKSTELLIRKLPFQRLVREIAQDF R Y Q I R K 0 1 0 0 0 1 1 0 0 1 2 1 0 0 0 1 1 0 1 0 0 0 10 1 1249.703 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;Q6NXT2;K7EMV3;B4DEB1;B2R6Y1;K7ES00;K7EP01;Q5TEC6 B4E380 55 64 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C no no 3 0.0033807 47.559 1 0.60584 0.93244 NaN 1 Median NaN NaN NaN 0 0 Median 0.60584 0.93244 NaN 1 0 Median 37657000 22494000 15163000 0 0 0 37657000 22494000 15163000 3097 399;849 3386 5108 8211;8212 8211 2 YQPLASTASDNDFVTPEPR SQRAPSAKKPSTGSRYQPLASTASDNDFVT ASTASDNDFVTPEPRRTTRRHPNTQQRASK R Y Q P R R 2 1 1 2 0 1 1 0 0 0 1 0 0 1 3 2 2 0 1 1 0 0 19 0 2106.9858 Q15021;B4E0B7;B3KY03;B3KMS0 Q15021 1325 1343 NCAPD2 Condensin complex subunit 1 yes no 2 8.595E-14 93.152 2 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3098 820 3387;3388 5109;5110;5111 8213;8214;8215;8216;8217 8214 1352;1999 0 YQYGGLNSGRPVTPPR MCSFQILKPSEKKAKYQYGGLNSGRPVTPP QYGGLNSGRPVTPPRTANPPKKR_______ K Y Q P R T 0 2 1 0 0 1 0 3 0 0 1 0 0 0 3 1 1 0 2 1 0 0 16 1 1760.8958 B4DJ75;V9HW04;P62140 B4DJ75 276 291 HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit yes no 3 6.3338E-05 60.918 1 0.86873 1.3986 NaN 1 Median NaN NaN NaN 0 0 Median 0.86873 1.3986 NaN 1 0 Median 15287000 8785600 6500900 0 0 0 15287000 8785600 6500900 3099 470 3389 5112 8218 8218 1 YRPDLR RATLSSIRHMIRKNKYRPDLRMLAGRVGRQ IRHMIRKNKYRPDLRMLAGRVGRQQAVSSL K Y R L R M 0 2 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 6 1 818.43989 H0YKD8;P46779;O60251 H0YKD8 102 107 RPL28 60S ribosomal protein L28 yes no 2 1.3117E-10 108.24 1 0.57433 1.039 NaN 1 Median NaN NaN NaN 0 0 Median 0.57433 1.039 NaN 1 0 Median 161010000 102920000 58085000 0 0 0 161010000 102920000 58085000 3100 656 3390 5113 8219 8219 1 YRPGTVALR RKSAPSTGGVKKPHRYRPGTVALREIRRYQ VKKPHRYRPGTVALREIRRYQKSTELLIRK R Y R L R E 1 2 0 0 0 0 0 1 0 0 1 0 0 0 1 0 1 0 1 1 0 0 9 1 1031.5876 B4E380;K7EK07;B2R4P9;Q71DI3;Q16695;P84243;P68431;Q6NXT2;K7EMV3;B4DEB1;B2R6Y1;A8K4Y7;K7ES00;K7EP01;Q6TXQ4;Q5TEC6 B4E380 42 50 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;H3F3C;HIST2H3PS2 Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C no no 2;3 5.2465E-21 113.18 4 27 0.54605 1.1403 17.056 23 Linear 0.69752 0.93468 6.1852 4 0 Linear 0.54364 1.0304 18.58 19 0 Plateau 11058000000 6745400000 4312900000 1303100000 771510000 531600000 9755200000 5973900000 3781300000 3101 399;849 3391 5114;5115;5116;5117;5118;5119;5120;5121;5122;5123;5124;5125;5126;5127;5128;5129;5130;5131;5132;5133;5134;5135;5136;5137;5138;5139;5140;5141;5142;5143;5144 8220;8221;8222;8223;8224;8225;8226;8227;8228;8229;8230;8231;8232;8233;8234;8235;8236;8237;8238;8239;8240;8241;8242;8243;8244;8245;8246;8247;8248;8249;8250;8251;8252;8253;8254;8255;8256;8257;8258;8259;8260;8261;8262;8263;8264;8265;8266;8267;8268;8269;8270;8271;8272;8273;8274;8275;8276;8277;8278;8279;8280;8281;8282;8283 8276 64 YRTEAHQDVVGR SLKQLYTVTMDVHSRYRTEAHQDVVGRFNE HSRYRTEAHQDVVGRFNERFILSLASCKKC R Y R G R F 1 2 0 1 0 1 1 1 1 0 0 0 0 0 0 0 1 0 1 2 0 0 12 1 1429.7062 Q9H0A0;E9PMU0;A0A087WV29;Q05CW7 Q9H0A0 171 182 NAT10 N-acetyltransferase 10 no no 3 0.00023651 68.676 1 1 0.72299 0.98834 8.1776 2 Median 0.80477 1.0472 NaN 1 0 Median 0.64952 0.93281 NaN 1 0 Median 35183000 19224000 15959000 26854000 14093000 12761000 8329700 5131300 3198400 3102 924;801 3392 5145;5146 8284;8285;8286 8285 3 YSEEGLSPSK RVLLRGRESPAAGPRYSEEGLSPSKRRRLS AAGPRYSEEGLSPSKRRRLSMRNHHSDLTF R Y S S K R 0 0 0 0 0 0 2 1 0 0 1 1 0 0 1 3 0 0 1 0 0 0 10 0 1095.5084 J3QK86;J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9 J3QK86 1745 1754 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A yes no 2 0.0019733 64.64 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3103 636 3393 5147 8287;8288;8289 8287 968 0 YSGAYGASVSDEELK DRMKESSPSGSKSQRYSGAYGASVSDEELK YSGAYGASVSDEELKRRVAEELALEQAKKE R Y S L K R 2 0 0 1 0 0 2 2 0 0 1 1 0 0 0 3 0 0 2 1 0 0 15 0 1574.71 A4D1N4;C9JRZ6;Q9NX63;B7Z1X9;F8WAR4 A4D1N4 49 63 CHCHD3 MICOS complex subunit MIC19 yes no 2 1.2686E-06 74.296 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3104 311 3394 5148 8290;8291 8290 463 0 YSGPAPPPNR KNKAQENKNKKVRPRYSGPAPPPNRFNIWP KVRPRYSGPAPPPNRFNIWPGYRWDGVDRS R Y S N R F 1 1 1 0 0 0 0 1 0 0 0 0 0 0 4 1 0 0 1 0 0 0 10 0 1054.5196 A8K4Z6;Q9BRD0 A8K4Z6 566 575 BUD13 BUD13 homolog yes no 2 0.010907 40.616 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3105 357 3395 5149 8292 8292 550 0 YSGPEDDAAISLAFSK KEYFADMKRHRIQFKYSGPEDDAAISLAFS SGPEDDAAISLAFSKKQIDDRKEWLTNFME K Y S S K K 3 0 0 2 0 0 1 1 0 1 1 1 0 1 1 3 0 0 1 0 0 0 16 0 1669.7835 P11388 P11388 640 655 TOP2A DNA topoisomerase 2-alpha yes yes 2 0.008325 32.275 1 0.43433 0.54058 NaN 1 Median NaN NaN NaN 0 0 Median 0.43433 0.54058 NaN 1 0 Median 9759100 6829600 2929400 0 0 0 9759100 6829600 2929400 3106 734 3396 5150 8293 8293 1 YSHSYLSDSDTEAK SDDEHDPLDNTSRPRYSHSYLSDSDTEAKL RYSHSYLSDSDTEAKLTETNA_________ R Y S A K L 1 0 0 2 0 0 1 0 1 0 1 1 0 0 0 4 1 0 2 0 0 0 14 0 1601.6845 Q9NYE8;B3KVF8;B4DFN7;B4DZ32;B4DYM1;A0A0D9SFK2;A0A024QZ63;Q92614 Q9NYE8 172 185 MAJN;hCG_27198;MYO18A Unconventional myosin-XVIIIa yes no 2 5.1537E-10 99.481 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3107 1 3397 5151 8294;8295;8296 8294 4;5 0 YSLDPENPTK ______________________________ ______________________________ R Y S T K S 0 0 1 1 0 0 1 0 0 0 1 1 0 0 2 1 1 0 1 0 0 0 10 0 1162.5506 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;J3KRB3;A0A087WWH0;J3QS96;J3KSJ0;A0A087WY81 A0A087WXM6 4 13 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 yes no 2 0.0068946 64.04 1 1 0.5711 0.72022 108.57 2 Median 1.287 1.5519 NaN 1 0 Median 0.25343 0.33424 NaN 1 0 Median 17755000 12425000 5330200 3318600 1809000 1509600 14436000 10616000 3820600 3108 43 3398 5152;5153 8297;8298;8299 8297 3 YSQLVVETIR SKKRKNSKKKNQPGKYSQLVVETIRRLGER NQPGKYSQLVVETIRRLGERNGSSLAKIYT K Y S I R R 0 1 0 0 0 1 1 0 0 1 1 0 0 0 0 1 1 0 1 2 0 0 10 0 1206.6608 Q92522 Q92522 48 57 H1FX Histone H1x yes yes 2 4.5741E-20 119.68 1 1 0.56179 0.75714 NaN 1 Median NaN NaN NaN 0 0 Median 0.56179 0.75714 NaN 1 0 Median 34569000 20677000 13892000 866460 0 866460 33702000 20677000 13025000 3109 898 3399 5154;5155 8300;8301;8302 8302 3 YSQLVVETIRR SKKRKNSKKKNQPGKYSQLVVETIRRLGER QPGKYSQLVVETIRRLGERNGSSLAKIYTE K Y S R R L 0 2 0 0 0 1 1 0 0 1 1 0 0 0 0 1 1 0 1 2 0 0 11 1 1362.7619 Q92522 Q92522 48 58 H1FX Histone H1x yes yes 2;3 0.0090909 47.228 2 0.56762 0.95808 0.36466 2 Median NaN NaN NaN 0 0 Median 0.56762 0.95808 0.36466 2 0 Median 49940000 30543000 19397000 0 0 0 49940000 30543000 19397000 3110 898 3400 5156;5157 8303;8304 8304 2 YSSEVATESPLDFTK GDSFLNEDLNQLIKRYSSEVATESPLDFTK YSSEVATESPLDFTKYLKTSLH________ R Y S T K Y 1 0 0 1 0 0 2 0 0 0 1 1 0 1 1 3 2 0 1 1 0 0 15 0 1672.7832 A8K905;Q8WTT2 A8K905 779 793 NOC3L Nucleolar complex protein 3 homolog yes no 2 7.5579E-12 80.632 1 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3111 374 3401 5158;5159 8305;8306;8307 8305 570 0 YSVDIPLDK SFVKVYNYNHLMPTRYSVDIPLDKTVVNKD HLMPTRYSVDIPLDKTVVNKDVFRDPALKR R Y S D K T 0 0 0 2 0 0 0 0 0 1 1 1 0 0 1 1 0 0 1 1 0 0 9 0 1048.5441 E4W6B6;B2R4D8;A0A024R1V4;K7ELC7;P61353;K7EQQ9 E4W6B6 85 93 RPL27 60S ribosomal protein L27 yes no 2 0.013438 47.96 1 1 0.60522 0.76935 NaN 1 Median NaN NaN NaN 0 0 Median 0.60522 0.76935 NaN 1 0 Median 12340000 7557300 4782700 1607200 1607200 0 10733000 5950100 4782700 3112 37 3402 5160;5161 8308;8309;8310 8309 3 YSVLNNDDYFADVSPLR EKKKKKKVVKEPETRYSVLNNDDYFADVSP VLNNDDYFADVSPLRATSPSKSVAHGQAPE R Y S L R A 1 1 2 3 0 0 0 0 0 0 2 0 0 1 1 2 0 0 2 2 0 0 17 0 1986.9323 Q1ED39;H3BMC9 Q1ED39 29 45 KNOP1 Lysine-rich nucleolar protein 1 yes no 2 5.4538E-06 60.209 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3113 829 3403 5162 8311;8312;8313 8313 1369 0 YSVLNNDDYFADVSPLRATSPSK EKKKKKKVVKEPETRYSVLNNDDYFADVSP YFADVSPLRATSPSKSVAHGQAPEMPLVKK R Y S S K S 2 1 2 3 0 0 0 0 0 0 2 1 0 1 2 4 1 0 2 2 0 0 23 1 2558.2289 Q1ED39;H3BMC9 Q1ED39 29 51 KNOP1 Lysine-rich nucleolar protein 1 yes no 3 4.5616E-20 92.822 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3114 829 3404 5163 8314 8314 1369;2000 0 YTEGVQSLNWTK SLDPIKEWLNSCDLKYTEGVQSLNWTKIMK DLKYTEGVQSLNWTKIMKTIVDDPEGFFEQ K Y T T K I 0 0 1 0 0 1 1 1 0 0 1 1 0 0 0 1 2 1 1 1 0 0 12 0 1424.6936 Q9Y5B9 Q9Y5B9 893 904 SUPT16H FACT complex subunit SPT16 yes yes 2 1.1493E-32 107.46 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3115 967 3405 5164 8315 8315 2059 0 YTIIPLNK VTGKKLLERGELKRRYTIIPLNKISARCIA RGELKRRYTIIPLNKISARCIAPETLRVAQ R Y T N K I 0 0 1 0 0 0 0 0 0 2 1 1 0 0 1 0 1 0 1 0 0 0 8 0 960.56442 B7ZLZ7;A0A024R158;O95347;A8K984;B3KMB1;Q2KQ72;Q05BV1 B7ZLZ7 573 580 SMC2;SMC2L1 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 2 yes no 2 0.018448 56.122 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 3268600 3268600 0 0 0 0 3268600 3268600 0 3116 27 3406 5165 8316 8316 1 YTQVGPDHNR LNQYFQKEKIQGEYKYTQVGPDHNRSFIAE QGEYKYTQVGPDHNRSFIAEMTIYIKQLGR K Y T N R S 0 1 1 1 0 1 0 1 1 0 0 0 0 0 1 0 1 0 1 1 0 0 10 0 1185.5527 Q08211;Q58F26;Q6PJK6 Q08211 200 209 DHX9 ATP-dependent RNA helicase A yes no 2;3 0.00098155 73.985 2 0.47367 0.64646 0.56488 2 Median NaN NaN NaN 0 0 Median 0.47367 0.64646 0.56488 2 0 Median 82668000 55402000 27266000 0 0 0 82668000 55402000 27266000 3117 802 3407 5166;5167 8317;8318;8319;8320 8317 4 YTVQDESHSEWVSCVR RDKTIKLWNTLGVCKYTVQDESHSEWVSCV TVQDESHSEWVSCVRFSPNSSNPIIVSCGW K Y T V R F 0 1 0 1 1 1 2 0 1 0 0 0 0 0 0 3 1 1 1 3 0 0 16 0 1980.8636 E9KL35;P63244;D6RFX4;D6RFZ9;H0YAF8;B4DVD2;D6RHH4;D6R9Z1;H0YAM7;J3KPE3;H0Y8W2;D6R9L0;D6RBD0 E9KL35 140 155 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 3 0.00061489 37.77 1 0.75611 0.96837 NaN 1 Median 0.75611 0.96837 NaN 1 0 Median NaN NaN NaN 0 0 Median 9279300 5827600 3451700 9279300 5827600 3451700 0 0 0 3118 610 3408 5168 8321;8322 8321 2 YVASEVCEESIAVGTVK TGYLVLKELGIKVGKYVASEVCEESIAVGT ASEVCEESIAVGTVKHEGNIKYVNDVRNIT K Y V V K H 2 0 0 0 1 0 3 1 0 1 0 1 0 0 0 2 1 0 1 4 0 0 17 0 1839.8924 Q9UBC3;B3KM53 Q9UBC3 601 617 DNMT3B DNA (cytosine-5)-methyltransferase 3B yes no 2 0.00015423 47.288 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 1805900 0 1805900 1805900 0 1805900 0 0 0 3119 948 3409 5169 8323 8323 1 YVDLKR GSVRGCVKGIKALGKYVDLKRLNTTGVSAG VKGIKALGKYVDLKRLNTTGVSAGCTADLL K Y V K R L 0 1 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 6 1 792.44939 O15230 O15230 3100 3105 LAMA5 Laminin subunit alpha-5 yes yes 2 0.017403 48.115 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 0 0 0 0 0 0 0 0 0 3120 699 3410 5170 8324 8324 2070 0 YVIYIER KGQQIGKVVQVYRKKYVIYIERVQREKANG VVQVYRKKYVIYIERVQREKANGTTVHVGI K Y V E R V 0 1 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 2 1 0 0 7 0 954.51747 Q6IBH6;P61254;J3KTJ8;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;J3KS10;Q9UNX3;E5RIT6 Q6IBH6 78 84 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 no no 2 0.0043349 57.559 1 NaN NaN NaN 0 Median NaN NaN NaN 0 0 Median NaN NaN NaN 0 0 Median 2495400 2495400 0 0 0 0 2495400 2495400 0 3121 782;959 3411 5171 8325 8325 1 YYPTEDVPRK KNGGTRVVKLRKMPRYYPTEDVPRKLLSHG RKMPRYYPTEDVPRKLLSHGKKPFSQHVRK R Y Y R K L 0 1 0 1 0 0 1 0 0 0 0 1 0 0 2 0 1 0 2 1 0 0 10 1 1266.6245 Q8TBK5;Q8N5Z7;A0A024RBK3;Q02878;B2R4K7;Q9HBB3;F8VR69;F8VZ45;U3KQR5 Q8TBK5 115 124 RPL6 60S ribosomal protein L6 yes no 2;3 0.00017775 69.954 1 2 0.64213 0.91705 2.1671 2 Median 0.71343 0.93121 NaN 1 0 Median 0.57795 0.9031 NaN 1 0 Median 117260000 82285000 34973000 18743000 10156000 8586800 98515000 72129000 26386000 3122 146 3412 5172;5173;5174 8326;8327;8328 8328 3 YYVTIIDAPGHR GITIDISLWKFETSKYYVTIIDAPGHRDFI TSKYYVTIIDAPGHRDFIKNMITGTSQADC K Y Y H R D 1 1 0 1 0 0 0 1 1 2 0 0 0 0 1 0 1 0 2 1 0 0 12 0 1403.7197 A0A087WV01;Q9H2I7;Q6IPT9;Q6IPS9;Q6IPN6;Q53HR5;Q53HQ7;Q53HM9;Q53GE9;Q53GA1;Q53G85;Q5VTE0;P68104;A6PW80;Q5JR01;A9X7H1;B4DNE0;Q96RE1;Q16577;B4DV42;Q9NZS6;A0A087WVQ9;A8K9C4 A0A087WV01 85 96 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 yes no 2;3 0.00091487 87.913 4 3.7148 4.8709 3.5902 4 Median NaN NaN NaN 0 0 Median 3.7148 4.8709 3.5902 4 0 Median 99397000 21960000 77436000 0 0 0 99397000 21960000 77436000 3123 186 3413 5175;5176;5177;5178 8329;8330;8331;8332;8333;8334;8335;8336 8335 8